BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (243 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 362 5e-99 UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 ... 301 1e-80 UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 280 3e-74 UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 261 1e-68 UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 260 2e-68 UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 248 1e-64 UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ... 247 3e-64 UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 243 6e-63 UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 241 1e-62 UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 237 2e-61 UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine... 236 7e-61 UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thio... 231 2e-59 UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella... 224 2e-57 UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 223 4e-57 UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 223 5e-57 UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 ... 222 7e-57 UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 ... 221 2e-56 UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 ... 221 2e-56 UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 ... 221 2e-56 UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 ... 219 4e-56 UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 ... 214 3e-54 UniRef50_Q8D323 YjfH protein n=1 Tax=Wigglesworthia glossinidia ... 210 3e-53 UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 202 8e-51 UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 ... 200 3e-50 UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 ... 200 3e-50 UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acid... 197 2e-49 UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 ... 192 1e-47 UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14... 189 9e-47 UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransfera... 187 2e-46 UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 ... 187 3e-46 UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiale... 186 4e-46 UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase... 184 3e-45 UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter ... 183 4e-45 UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 ... 182 7e-45 UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 182 9e-45 UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ... 182 1e-44 UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 ... 180 4e-44 UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 ... 180 4e-44 UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 ... 178 1e-43 UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bac... 178 1e-43 UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0... 178 1e-43 UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Delt... 177 3e-43 UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 ... 176 6e-43 UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35... 176 8e-43 UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales... 175 1e-42 UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desu... 173 6e-42 UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 ... 172 8e-42 UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=... 172 1e-41 UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 ... 172 1e-41 UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Helio... 171 1e-41 UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Dein... 171 2e-41 UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 ... 171 2e-41 UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntro... 169 8e-41 UniRef50_A7BZJ1 SpoU rRNA Methylase family n=1 Tax=Beggiatoa sp.... 169 9e-41 UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fra... 168 1e-40 UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, put... 168 1e-40 UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac... 167 3e-40 UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteri... 165 1e-39 UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lacto... 165 1e-39 UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli Re... 165 1e-39 UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 ... 164 2e-39 UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase... 164 3e-39 UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethio... 164 3e-39 UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 ... 164 3e-39 UniRef50_C0QBT7 RNA methyltransferase (TrmH family protein, grou... 163 6e-39 UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 ... 162 9e-39 UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase... 162 1e-38 UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clos... 162 1e-38 UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyan... 162 1e-38 UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 ... 162 1e-38 UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51... 161 2e-38 UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 160 2e-38 UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas ... 160 3e-38 UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21... 160 3e-38 UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 ... 160 3e-38 UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase... 159 5e-38 UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltra... 157 2e-37 UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepI... 157 2e-37 UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 ... 157 4e-37 UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 ... 157 4e-37 UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostri... 157 4e-37 UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipe... 156 6e-37 UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 ... 156 7e-37 UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Crypto... 155 1e-36 UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 ... 154 2e-36 UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 ... 154 2e-36 UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 ... 152 7e-36 UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 ... 152 1e-35 UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 ... 151 2e-35 UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerof... 150 3e-35 UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus... 150 3e-35 UniRef50_Q7BKE9 Predicted rRNA methylase n=4 Tax=Bacteria RepID=... 149 6e-35 UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomyceta... 149 8e-35 UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces ... 149 1e-34 UniRef50_D1B9Y1 RNA methyltransferase, TrmH family, group 3 n=1 ... 148 1e-34 UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 ... 147 4e-34 UniRef50_A7HWP6 RNA methyltransferase, TrmH family, group 3 n=1 ... 147 4e-34 UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 ... 146 5e-34 UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14... 146 5e-34 UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacteriu... 146 5e-34 UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 ... 145 1e-33 UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=D... 145 1e-33 UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacter... 144 4e-33 UniRef50_A1KPR5 Uncharacterized tRNA/rRNA methyltransferase BCG_... 144 4e-33 UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sph... 143 5e-33 UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 ... 143 6e-33 UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Ta... 142 1e-32 UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 ... 141 2e-32 UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococ... 141 2e-32 UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 ... 139 6e-32 UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 ... 138 1e-31 UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 ... 138 2e-31 UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 ... 137 2e-31 UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 ... 137 3e-31 UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12... 137 4e-31 UniRef50_A8LF93 RNA methyltransferase, TrmH family, group 3 n=16... 137 4e-31 UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Te... 137 4e-31 UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 ... 136 5e-31 UniRef50_D2LHP2 RNA methyltransferase, TrmH family, group 3 n=1 ... 136 5e-31 UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale... 136 5e-31 UniRef50_Q2RQU5 RNA methyltransferase TrmH, group 3 n=3 Tax=Rhod... 135 9e-31 UniRef50_Q5GSE7 RRNA methylases n=12 Tax=Rickettsiales RepID=Q5G... 135 1e-30 UniRef50_A8F2F0 tRNA/rRNA methyltransferase n=16 Tax=cellular or... 132 8e-30 UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=... 132 9e-30 UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 132 2e-29 UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 ... 131 2e-29 UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae Re... 131 2e-29 UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=... 131 2e-29 UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacte... 131 2e-29 UniRef50_B8H4C5 23S rRNA Gm2251 methyltransferase n=3 Tax=Caulob... 131 2e-29 UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidet... 131 2e-29 UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 ... 130 3e-29 UniRef50_Q0BYS7 RNA methyltransferase, TrmH family, group 3 n=1 ... 130 3e-29 UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 ... 130 4e-29 UniRef50_Q0BV71 23S rRNA Gm2251 methyltransferase n=13 Tax=Aceto... 129 8e-29 UniRef50_C1ZH71 rRNA methylase n=1 Tax=Planctomyces limnophilus ... 128 1e-28 UniRef50_A6G5X9 RNA methyltransferase, TrmH family, group 3 n=1 ... 128 2e-28 UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 ... 127 3e-28 UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collins... 127 5e-28 UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 ... 126 7e-28 UniRef50_A7IKP0 RNA methyltransferase, TrmH family, group 3 n=13... 126 7e-28 UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H... 126 7e-28 UniRef50_O51468 Uncharacterized tRNA/rRNA methyltransferase BB_0... 126 7e-28 UniRef50_Q04SA9 TRNA (Guanosine-2'-O-)-methyltransferase n=4 Tax... 126 8e-28 UniRef50_A9GVZ1 tRNA/rRNA methyltransferase n=1 Tax=Sorangium ce... 125 1e-27 UniRef50_Q1GEY5 RNA methyltransferase TrmH group 3 n=13 Tax=Rhod... 125 2e-27 UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma a... 124 2e-27 UniRef50_A1B8P8 RNA methyltransferase, TrmH family, group 3 n=29... 124 3e-27 UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax... 124 4e-27 UniRef50_B0T2B4 RNA methyltransferase, TrmH family, group 3 n=2 ... 123 5e-27 UniRef50_A5V919 RNA methyltransferase, TrmH family, group 3 n=2 ... 123 6e-27 UniRef50_A3VTQ4 RRNA methylase n=1 Tax=Parvularcula bermudensis ... 122 9e-27 UniRef50_C6XLJ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 122 9e-27 UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 ... 122 1e-26 UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 ... 122 1e-26 UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=M... 122 1e-26 UniRef50_B3CT02 tRNA/rRNA methyltransferase, TrmH family n=2 Tax... 121 2e-26 UniRef50_Q6MIZ9 RNA methyltransferase, TrmH family, group n=1 Ta... 121 3e-26 UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candida... 120 3e-26 UniRef50_A6BZU1 Gm2251 methyltransferase of 23S rRNA n=1 Tax=Pla... 120 4e-26 UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group... 120 5e-26 UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 ... 120 5e-26 UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1... 119 7e-26 UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 ... 119 8e-26 UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma R... 119 8e-26 UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 ... 118 1e-25 UniRef50_Q3BPZ8 tRNA/rRNA methyltransferase n=13 Tax=Xanthomonad... 118 2e-25 UniRef50_Q6UCQ6 Predicted tRNA/rRNA methyltransferase n=2 Tax=Ba... 118 2e-25 UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Ta... 117 2e-25 UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacter... 117 5e-25 UniRef50_C7M1Q7 RNA methyltransferase, TrmH family, group 3 n=1 ... 117 5e-25 UniRef50_A3EV98 Putative TRNA/rRNA methyltransferase (SpoU) n=2 ... 116 5e-25 UniRef50_C4XN87 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 116 5e-25 UniRef50_C6V4C7 RNA methyltransferase, TrmH family, group 3 n=2 ... 116 7e-25 UniRef50_C1QAT9 rRNA methylase, putative, group 3 n=1 Tax=Brachy... 116 9e-25 UniRef50_A9M5R9 RNA methyltransferase, TrmH family, group 3 n=39... 115 1e-24 UniRef50_Q0ANM8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Hypho... 115 2e-24 UniRef50_B3S0S7 Putative uncharacterized protein n=1 Tax=Trichop... 114 4e-24 UniRef50_Q4A787 TRNA/rRNA methyltransferase n=4 Tax=Mycoplasma R... 113 5e-24 UniRef50_Q4A651 Putative tRNA/rRNA methyltransferase n=1 Tax=Myc... 113 5e-24 UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Ato... 112 2e-23 UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15... 110 3e-23 UniRef50_C6HZU7 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Lepto... 110 4e-23 UniRef50_B3PW50 23S rRNA (Guanosine-2'-O-)-methyltransferase n=2... 110 5e-23 UniRef50_Q2G8L5 RNA methyltransferase TrmH, group 3 n=9 Tax=Sphi... 110 5e-23 UniRef50_Q1MSB5 RRNA methylases n=1 Tax=Lawsonia intracellularis... 109 8e-23 UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis... 109 9e-23 UniRef50_Q8EX27 rRNA methylase n=1 Tax=Mycoplasma penetrans RepI... 109 9e-23 UniRef50_Q3CY16 RNA methyltransferase, TrmH family, group 3 (Fra... 108 1e-22 UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 ... 108 1e-22 UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 108 2e-22 UniRef50_B2IK44 RNA methyltransferase, TrmH family, group 3 n=2 ... 108 2e-22 UniRef50_D0RNL1 SpoU rRNA Methylase family n=1 Tax=alpha proteob... 108 2e-22 UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitu... 108 2e-22 UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verru... 108 2e-22 UniRef50_C6BUS0 RNA methyltransferase, TrmH family, group 3 n=2 ... 108 2e-22 UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A... 107 4e-22 UniRef50_B0S8U9 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax... 106 8e-22 UniRef50_Q6KIE3 SpoU class tRNA/rRNA methylase n=1 Tax=Mycoplasm... 106 9e-22 UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planct... 104 2e-21 UniRef50_Q1UZI1 SpoU rRNA Methylase family protein n=3 Tax=Candi... 104 3e-21 UniRef50_Q820Y2 TRNA/rRNA methyltransferase n=2 Tax=Tropheryma w... 103 4e-21 UniRef50_D0JBH4 SpoU rRNA methylase family protein n=2 Tax=Blatt... 103 5e-21 UniRef50_Q5FFT7 Hypothetical tRNA/rRNA methyltransferase n=4 Tax... 102 9e-21 UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacil... 102 1e-20 UniRef50_C6WJ30 RNA methyltransferase, TrmH family, group 3 n=1 ... 101 2e-20 UniRef50_Q98R32 TRNA/RRNA METHYLTRANSFERASE n=1 Tax=Mycoplasma p... 101 3e-20 UniRef50_A5D0U2 rRNA methylases n=2 Tax=Peptococcaceae RepID=A5D... 100 4e-20 UniRef50_A4S7U0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 100 5e-20 UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 ... 100 6e-20 UniRef50_B6R0T8 RNA methyltransferase, TrmH family, group 3 n=2 ... 100 7e-20 UniRef50_C0QYW1 RNA methyltransferase, TrmH family, group 3 n=1 ... 99 9e-20 UniRef50_A0NWK7 TRNA/rRNA metyltransferase n=1 Tax=Labrenzia agg... 99 1e-19 UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victi... 99 1e-19 UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostri... 99 1e-19 UniRef50_B6YR56 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 99 2e-19 UniRef50_C0GP39 RNA methyltransferase, TrmH family, group 3 n=1 ... 98 2e-19 UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 98 2e-19 UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2... 98 3e-19 UniRef50_UPI0000D53948 hypothetical protein P700755_33595 n=1 Ta... 98 3e-19 UniRef50_D0RMZ2 RNA methyltransferase, TrmH family, group 3 n=1 ... 97 3e-19 UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteri... 97 4e-19 UniRef50_A6Q6S3 RNA methyltransferase, TrmH family n=2 Tax=Epsil... 97 6e-19 UniRef50_Q7NAH8 SpoU n=2 Tax=Mycoplasma RepID=Q7NAH8_MYCGA 97 7e-19 UniRef50_P47494 Uncharacterized tRNA/rRNA methyltransferase MG25... 96 8e-19 UniRef50_A1VHL4 RNA methyltransferase, TrmH family, group 3 n=9 ... 96 1e-18 UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 96 1e-18 UniRef50_D2R0C4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Pirel... 96 2e-18 UniRef50_B6IWB6 RNA methyltransferase, TrmH family n=6 Tax=Prote... 95 2e-18 UniRef50_Q04UK4 RRNA methylase n=6 Tax=Leptospira RepID=Q04UK4_L... 95 2e-18 UniRef50_B1M5G3 RNA methyltransferase, TrmH family, group 3 n=16... 94 3e-18 UniRef50_C7PC85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chiti... 94 4e-18 UniRef50_Q7UG85 SpoU rRNA methylase family protein n=1 Tax=Rhodo... 94 4e-18 UniRef50_UPI00016C0619 tRNA/rRNA methyltransferase (SpoU) n=1 Ta... 94 6e-18 UniRef50_D2MNZ0 RNA methyltransferase, TrmH family n=1 Tax=Bulle... 93 9e-18 UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachl... 93 1e-17 UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Ta... 92 1e-17 UniRef50_A8RCR6 Putative uncharacterized protein n=1 Tax=Eubacte... 92 1e-17 UniRef50_A7NNQ2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Rosei... 92 1e-17 UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 92 2e-17 UniRef50_UPI0000ECA455 rRNA methyltransferase 1, mitochondrial p... 92 2e-17 UniRef50_C0GJM5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Dethi... 92 2e-17 UniRef50_B2S202 Putative uncharacterized protein n=2 Tax=Trepone... 92 2e-17 UniRef50_B7G778 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 92 2e-17 UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium... 91 2e-17 UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes Re... 91 3e-17 UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 91 3e-17 UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 91 4e-17 UniRef50_D1CFS4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 91 4e-17 UniRef50_D1BMG9 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Veill... 91 4e-17 >UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=32 Tax=Proteobacteria RepID=RLMB_VIBVY Length = 247 Score = 362 bits (930), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 171/241 (70%), Positives = 205/241 (85%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +E IYGIHAV+A+L++ PERF E ++LKGR+D RL+P+++ L+ GV +Q R+ LD+K Sbjct: 3 NEFIYGIHAVRAVLDKEPERFIEAYVLKGRQDDRLMPILNELQMVGVSLQQMTRKTLDDK 62 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + GA HQGIIARVKP +Q ENDL D++A P LLILDGVTDPHNLGACLR+ADAAGV Sbjct: 63 AHGANHQGIIARVKPAKQLNENDLDDILAKHASPLLLILDGVTDPHNLGACLRNADAAGV 122 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AVIVPKD+SA + AT KVACGAAE+VPL+RVTNLARTMR LQE+ IWIVGTAGEA H Sbjct: 123 AAVIVPKDKSAPMTATVSKVACGAAETVPLVRVTNLARTMRHLQEQGIWIVGTAGEATHD 182 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +YQ+K+TG LA+VMGAEG+GMRRLTRE CD+LI IPMAG+VSSLNVSVA+GICLFEAVRQ Sbjct: 183 IYQAKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGAVSSLNVSVASGICLFEAVRQ 242 Query: 242 R 242 R Sbjct: 243 R 243 >UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Gammaproteobacteria RepID=Q1LSR1_BAUCH Length = 248 Score = 301 bits (771), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 152/245 (62%), Positives = 198/245 (80%), Gaps = 3/245 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M+E+IYGIHAVQA+L+R P+ F+EV++L+ R D+R +I L+ + ++I++ NRQ+LD Sbjct: 1 MNEIIYGIHAVQAILKRDPQLFKEVYLLERRNDQRFQCIIKQLKQKKIIIKIVNRQWLDM 60 Query: 61 KSDGAVHQGIIARVKPGR-QYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 + GA HQGIIARV+ R Q+QE DLP L+A P LL+LDGVTDPHNLGACLR ADAA Sbjct: 61 QVKGATHQGIIARVQTNRRQFQEQDLPALLAQHTAPLLLVLDGVTDPHNLGACLRCADAA 120 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 GV+A+I+P++RSA LNAT KKVA GAAE++PLI+VTNLART+R+LQE NI I+GT EAD Sbjct: 121 GVNAIIIPRNRSAYLNATVKKVASGAAETMPLIQVTNLARTLRLLQEHNILILGTTIEAD 180 Query: 180 HTLYQS--KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 +YQ+ K T +ALV+GAEG G+RRLT+++C+EL+ IPM GSV+SLNVSVA G+ LFE Sbjct: 181 SHIYQTSFKFTSPIALVVGAEGNGIRRLTKKYCNELLRIPMVGSVASLNVSVAVGVFLFE 240 Query: 238 AVRQR 242 VRQR Sbjct: 241 VVRQR 245 >UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=285 Tax=Proteobacteria RepID=RLMB_PSEPK Length = 248 Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 139/241 (57%), Positives = 181/241 (75%), Gaps = 2/241 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E IYG+HAVQALL+ P+R +++++ +GR + RL L+ V + A R+ +D Sbjct: 5 EKIYGVHAVQALLQHHPKRVKQIWLSEGRSEPRLETLLALAAENRVPVGQAERREMDAWV 64 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAGV 121 +G VHQG++A V P + + E L +L+ + P +L+LDGVTDPHNLGACLR+ADAAG Sbjct: 65 EG-VHQGVVAEVSPSQVWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTADAAGA 123 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AVIVPKD+SA L +KVACGAAE +PL+ VTNLART+ LQ+ +W+VGTAGEA+ Sbjct: 124 TAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEQE 183 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +YQ +TG L ++MGAEG+GMRRLTREHCD L+ +PMAGSVSSLNVSVATG+CLFEAVRQ Sbjct: 184 IYQQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFEAVRQ 243 Query: 242 R 242 R Sbjct: 244 R 244 >UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=23 Tax=Proteobacteria RepID=RLMB_CHRVO Length = 248 Score = 261 bits (668), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 132/240 (55%), Positives = 167/240 (69%), Gaps = 3/240 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I+G HA+ A L + P+ E+++ GR D R ++ ++ V + + +++ LD S Sbjct: 6 LIHGFHAINARLWQNPKSLIEIWLAGGRHDARAKAVLDKAGAENVKLHIVDKERLDSMSG 65 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAGVH 122 A HQG++A + Y DL D++ +L +P LLILDGVTDPHNLGACLR ADA G H Sbjct: 66 NARHQGVVAMIDASMNYV--DLDDVLENLSEPPLLLILDGVTDPHNLGACLRVADAMGAH 123 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AVI PKDRSA LNAT KVACGAAE VP I VTNLART+R L++ +WI GT EAD L Sbjct: 124 AVIAPKDRSATLNATVSKVACGAAEVVPYITVTNLARTLRDLKDAGVWIAGTTMEADTDL 183 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 Y +G LA VMGAEGEGMRRLTREHCD L+SIPM G+V SLNVSV++G+ L E+ RQR Sbjct: 184 YHFDASGPLAWVMGAEGEGMRRLTREHCDVLVSIPMFGTVESLNVSVSSGMVLSESRRQR 243 >UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=2 Tax=Candidatus Blochmannia RepID=RLMB_BLOFL Length = 254 Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 123/244 (50%), Positives = 174/244 (71%), Gaps = 2/244 (0%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MSE++YGIH V++++ ++P R V+I+ D RL LI+ + + IQ R+ L+ Sbjct: 1 MSELVYGIHTVESIVNQSPNRILIVYIVSNPRDLRLKSLIYRIRKMNINIQECTRRVLNI 60 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ--PFLLILDGVTDPHNLGACLRSADA 118 KS + HQGIIA V P E+ L + + + P LL+LDG+TDPHNLGAC+RSADA Sbjct: 61 KSMKSAHQGIIAEVIPMPALNEDYLLHFLKTKNNIIPLLLVLDGITDPHNLGACIRSADA 120 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AGVH +IVP+DRSA +NAT +KVA G+++ VP +RVTNL+RT+++L++ NI+IVG+ + Sbjct: 121 AGVHMIIVPRDRSANVNATVRKVASGSSDRVPFVRVTNLSRTLKLLKKYNIYIVGSVLRS 180 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + L+ +++ +ALVMG+E G+RRLTRE+CD+L+ IP S SLNVSVATGI LFE Sbjct: 181 NQILFNTRLIDPIALVMGSESSGIRRLTRENCDKLVHIPTLQSTVSLNVSVATGIFLFET 240 Query: 239 VRQR 242 VRQR Sbjct: 241 VRQR 244 >UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=27 Tax=Neisseria RepID=RLMB_NEIMB Length = 250 Score = 248 bits (634), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 124/239 (51%), Positives = 162/239 (67%), Gaps = 3/239 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 IYG HAV A L + P+ E++I +G+ D R ++ ++ + + A+ L+ S G Sbjct: 7 IYGFHAVNARLWQNPKSIVELYIQEGKSDARTREVLEKAANENIRVYFADADRLNAISKG 66 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAGVHA 123 A HQG++ + + + L D++ +L +P LLILDG+TDPHNLGACLR+ADA GVHA Sbjct: 67 ARHQGVVGFIDASKNHVH--LEDVLENLSEPPLLLILDGITDPHNLGACLRTADAMGVHA 124 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VI PKD+SA LNAT KVACGAAE+VP I VTNLART+R L+E IWI+GT + LY Sbjct: 125 VIAPKDKSAGLNATVSKVACGAAETVPYITVTNLARTLRELKEYGIWIIGTDMSGESDLY 184 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + A VMG EG+GMRRLTREHCD L+SIPM G+V S+NVSV+ G+ L E RQR Sbjct: 185 HCNLPDSAAWVMGNEGDGMRRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETRRQR 243 >UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P9_MAGSM Length = 246 Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 127/240 (52%), Positives = 163/240 (67%), Gaps = 2/240 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I+G++ VQALLE +++LKGR KR+ +I ++GV IQ R +D +DG Sbjct: 7 IHGVNPVQALLESG-RPVSSLWVLKGRHGKRVEEMIEGFRARGVPIQFCERTAMDRMADG 65 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAV 124 HQG+IAR P +DL D++ QP L+ILDGV DPHNLGA +RSA+A G AV Sbjct: 66 GAHQGVIARCAPREAMSWDDLLDVVEKAKQPLLVILDGVEDPHNLGAIMRSAEAFGALAV 125 Query: 125 IVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQ 184 I+PKDR+A LNA A K + GAAE + LIRVTNLAR + LQ+ N+W++G AGEA L Sbjct: 126 ILPKDRTAPLNAGAIKASAGAAERLDLIRVTNLARAIEQLQQRNVWVIGLAGEAGAPLIG 185 Query: 185 S-KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 + G LALVMG EG G+RRLTRE CD+L +IPM G V SLNVSVATG+ L+E +RQR+ Sbjct: 186 TLDCKGPLALVMGNEGSGLRRLTRERCDQLAAIPMGGGVGSLNVSVATGVALYEVLRQRA 245 >UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Proteobacteria RepID=RLMB_COXBU Length = 250 Score = 243 bits (619), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 124/239 (51%), Positives = 166/239 (69%), Gaps = 2/239 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 IYGIHAV +L+ AP+R ++++ + R+D+RL L+ ++ GV + L +R L+ S+ Sbjct: 7 IYGIHAVSGVLDAAPQRIVKLYVQENRDDQRLQSLVEKAKALGVKVILLSRTELNTLSNE 66 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGI+A + E+ L L+ + P LLILDGV DPHNLGACLRSA+A GV A Sbjct: 67 K-HQGIVADCEEVENLDESALLSLLKKRETPALLLILDGVKDPHNLGACLRSANAFGVRA 125 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VI PKDR+ + +KVACGAAE P IRVTNL+RT+ LQ+E +WIVGTA EA+ + Sbjct: 126 VIAPKDRAVGVTPVVRKVACGAAEMTPFIRVTNLSRTIDWLQKEGVWIVGTAVEAETLIQ 185 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + +TG +A+V+G+EG G+RRLT+E CD L IP+ GSV SLNVSVA GICL+E RQR Sbjct: 186 EIDLTGDIAIVLGSEGAGLRRLTKERCDFLAQIPLRGSVESLNVSVACGICLYEVQRQR 244 >UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=49 Tax=cellular organisms RepID=RLMB_XYLFT Length = 249 Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 122/243 (50%), Positives = 166/243 (68%), Gaps = 1/243 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++ I GI+AV + +E E +EV + ++ RLL + +G+ ++ Q LD Sbjct: 5 NQWIVGINAVVSSIENDAEHVREVLVEAASKNSRLLDIEENARRKGIEVRRVTTQALDGV 64 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 G HQG+ AR R ++E+DL DL+ A+ Q LL+LDGV DPHNLGACLRSA AAG Sbjct: 65 GGGVRHQGVAARYAAVRLWEEHDLKDLVDAAGGQALLLVLDGVQDPHNLGACLRSAAAAG 124 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V AVI+PKD+S +NAT +K + GAA+ +P+I V NLAR++R LQ++++WI G AGE + Sbjct: 125 VTAVIIPKDKSVGINATVRKTSSGAADRLPVIAVVNLARSLRELQKQDVWIYGLAGEVET 184 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +LY + G +ALV+G E +G+RRLTREHCD L IPM G V SLNVSVA G+ LFEAVR Sbjct: 185 SLYALDLRGNVALVLGGEADGLRRLTREHCDVLARIPMPGEVESLNVSVAAGVTLFEAVR 244 Query: 241 QRS 243 QR+ Sbjct: 245 QRT 247 >UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112 Tax=Proteobacteria RepID=RLMB_NITEU Length = 260 Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 124/243 (51%), Positives = 161/243 (66%), Gaps = 3/243 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S+ I+G HA+ + L + P+ +E+++ R D+R L+ E+ + L + L + Sbjct: 4 SQYIFGFHAITSRLRQHPDSIKEIYLDTNRHDQRARDLMSLAETTSTRLILCEQDRLCKM 63 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAG 120 + HQG+ A V R+Y L DL+ L +P LL+LDGV DPHNLGACLR ADA G Sbjct: 64 TGTTRHQGVAAHVTKLRRYAT--LEDLLEGLTEPALLLVLDGVKDPHNLGACLRVADAFG 121 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VHAV+VPKDR+ L+AT KVA GA ++VP VTNLART+R L+E +WIVGTA +A Sbjct: 122 VHAVVVPKDRAVGLSATVHKVASGAVDTVPFFAVTNLARTLRELKEMGLWIVGTAADAPD 181 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 TL +T LA V+GAE GMRRLTRE CD L+SIPM+GS+ SLNVSV+ GICLFE R Sbjct: 182 TLDSVTLTRPLAWVLGAEDGGMRRLTREACDLLVSIPMSGSIESLNVSVSAGICLFETFR 241 Query: 241 QRS 243 Q S Sbjct: 242 QHS 244 >UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine bacterium EB0_41B09 RepID=A4GI27_9BACT Length = 246 Score = 236 bits (601), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 119/241 (49%), Positives = 161/241 (66%), Gaps = 3/241 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 IYG H++ + + P +E+FI + R D R+ L+ +++ V L+ + LD G Sbjct: 7 IYGFHSITSQIRLDPLVVKEIFIDEARSDGRVNDLMKIIKANEVKFHLSTKDRLDGMVSG 66 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIA-SLDQPFL-LILDGVTDPHNLGACLRSADAAGVH 122 HQG++A V+ Q + + D+I + D+P L LILDGV DP NLGAC R ADA GV Sbjct: 67 NKHQGVVALVREA-QNKYVTVEDIIEENYDKPLLFLILDGVVDPQNLGACFRVADAMGVD 125 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+I PKD + LNAT +KVACG AESVP + VTNLART+R L+ N+++ GT A+ +L Sbjct: 126 ALICPKDNAVGLNATVRKVACGGAESVPFVVVTNLARTIRYLKNSNVFVYGTDDNANKSL 185 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++ G +ALVMG+EG+GMRRLT E CD++ SIPM G V SLNVSVA+GICL+E RQR Sbjct: 186 QKTNFKGSIALVMGSEGKGMRRLTNELCDDIFSIPMMGQVESLNVSVASGICLYEINRQR 245 Query: 243 S 243 S Sbjct: 246 S 246 >UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ2_THICR Length = 244 Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 116/240 (48%), Positives = 159/240 (66%), Gaps = 2/240 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 + +YGIHA++ L+++P + KG +KR+ L+ + G+ QL + + + K Sbjct: 4 QQLYGIHAIEKFLKQSPHLIYSLTFQKGPVNKRVQSLMDQAKRMGIAYQLEPKSFFN-KL 62 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 +G VHQG++A V E DL L+ + P L LD V DPHNLGA LR+ADA GV Sbjct: 63 EG-VHQGVVATVAKEADLNETDLKALLEAESNPLFLFLDEVQDPHNLGAILRTADATGVT 121 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AV++PK S +NAT +KVACGAAE+V ++ V+NL RT++ LQ+ +W+ G AGE + TL Sbjct: 122 AVVIPKHNSVGVNATVRKVACGAAETVKVVVVSNLVRTIKELQQAGLWVTGLAGETNTTL 181 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 YQ G + LVMGAEG G+R+LTRE CD L +IPMAGS+ SLNVSVATG+ L+E RQR Sbjct: 182 YQLDFKGAVGLVMGAEGSGLRKLTRETCDHLAAIPMAGSIESLNVSVATGVVLYEVYRQR 241 >UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella RepID=B0TZ81_FRAP2 Length = 248 Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 115/247 (46%), Positives = 159/247 (64%), Gaps = 6/247 (2%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILK-GREDKRLLPLIHALESQGVVIQLAN--RQY 57 MS +IYGIHAV +L+E + +E+ + K + ++ +I ES+G+ + + +Q Sbjct: 1 MSSLIYGIHAVDSLVE--ANQAKEILVFKKSNANHKIESIIAKAESKGLKVTFIDSFKQL 58 Query: 58 LDEKSDGAVHQGIIA-RVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSA 116 A HQ I A + + Y END+ +LI F+LILD V DPHN GAC+RSA Sbjct: 59 PGRVRKDANHQNIFAIEINDFKTYSENDIENLIPQDKNAFILILDNVQDPHNFGACIRSA 118 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 +AG+ +I+PKD SA +NAT KKVACGAAE ++ VTNLAR + L++ +WI+G AG Sbjct: 119 HSAGIDFIIIPKDNSAPVNATVKKVACGAAEHTKIVVVTNLARAIEKLKQLGVWIIGLAG 178 Query: 177 EADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 EA+ +LY + +A+V GAEG GMR+ T+ CD L +PM G VSSLNVSVATGI L+ Sbjct: 179 EANDSLYSMNLADSVAIVAGAEGSGMRQRTKASCDFLAKLPMLGEVSSLNVSVATGIALY 238 Query: 237 EAVRQRS 243 E VRQR+ Sbjct: 239 ETVRQRA 245 >UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Moraxellaceae RepID=RLMB_ACIAD Length = 248 Score = 223 bits (569), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 116/242 (47%), Positives = 162/242 (66%), Gaps = 2/242 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E YG+H+V++LLE PER +F LKGR+D+RL ++ E G+ +Q A+R L++ + Sbjct: 5 EYYYGVHSVESLLELEPERVLTLFTLKGRDDQRLQKILELAEPFGISVQKASRDSLEKLA 64 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG++A V+P E DL L+ + DQ LL LD VTDPHNLGAC+R+A A G+ Sbjct: 65 GLPFHQGVVAAVRPHPVLNEKDLDQLLQNNDQALLLALDQVTDPHNLGACIRTAAAMGIA 124 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE-NIWIVGTA-GEADH 180 AVIVP+DRSA L TA+KVA G AE V I+VTNLART+ ++ + +VGT E Sbjct: 125 AVIVPRDRSASLTPTARKVAAGGAEKVKFIQVTNLARTLAHIKAHFFVKVVGTMLDEKAL 184 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + + +G +A+VMGAE G+R +T+ CD+ + IPM+G++ SLNVSVA G+ L+EA R Sbjct: 185 PIQKYDFSGNVAIVMGAEDTGLRPITQSQCDQTVYIPMSGNLQSLNVSVAAGMALYEACR 244 Query: 241 QR 242 QR Sbjct: 245 QR 246 >UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rickettsiella grylli RepID=A8PMQ1_9COXI Length = 253 Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 112/245 (45%), Positives = 158/245 (64%), Gaps = 5/245 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E I+G H + ALL+ AP++ ++ + R+DKR+ + + + G+ I ++ +E + Sbjct: 8 EFIFGFHTITALLKSAPQKIDTLYCREDRQDKRVQSIRNLAKLHGIPIGTLSKVQCNEIA 67 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLI-----ASLDQPFLLILDGVTDPHNLGACLRSAD 117 AVHQG+ A++K + E DL + +L+ PFLL+LDGV DPHNLGACLRSA+ Sbjct: 68 PNAVHQGVFAKIKKTSRLNEQDLMIFLHHRLHNNLNPPFLLVLDGVQDPHNLGACLRSAN 127 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 AAGV AVI+P+DR+ +K A GAAE L VTNLA + L++ IW G Sbjct: 128 AAGVDAVIIPQDRAVNKTPIVQKTAAGAAEVTSLFTVTNLATCLERLKKCGIWCYGLDQS 187 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 +Y + +TG LALV+GAEG+G+RRLT+ CD+L++IPM G+V SLNVSVA G+ LFE Sbjct: 188 GTRLIYDAPLTGPLALVLGAEGKGLRRLTKVCCDDLVAIPMVGTVGSLNVSVAAGVGLFE 247 Query: 238 AVRQR 242 VRQR Sbjct: 248 VVRQR 252 >UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Methylococcus capsulatus RepID=Q606P1_METCA Length = 250 Score = 222 bits (566), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 118/240 (49%), Positives = 157/240 (65%), Gaps = 1/240 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 ++GIHA +A L+ +P++ + ++ R RL + L+ GV I A+R+ LD +D Sbjct: 7 VWGIHAAEAALDYSPDKIVKAWLDDHRMQNRLQAVATRLDELGVEIVRADRKRLDRLADP 66 Query: 65 AVHQGIIARVK-PGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGI+ + PG Q + L L A+ P L+LD V DPHNLGACLR+ DAAGV Sbjct: 67 RKHQGILLELDLPGEQGEAELLDTLDAADGHPLYLVLDHVQDPHNLGACLRTCDAAGVKG 126 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 ++V KD+S L T KVA GAAE+VP+ RVTNLAR + ++ W+VG AGEA+ TLY Sbjct: 127 LVVTKDQSVGLTPTVAKVASGAAETVPVYRVTNLARCLDRFKQRGYWVVGAAGEAERTLY 186 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 + + L +VMGAEG G+RRLTRE CD L+ IPM G V SLN+SVATGI L+E +RQRS Sbjct: 187 ELDLRLPLVVVMGAEGVGLRRLTRERCDFLLRIPMVGGVESLNLSVATGIVLYEVMRQRS 246 >UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Proteobacteria RepID=A1WUS8_HALHL Length = 271 Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 116/239 (48%), Positives = 160/239 (66%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG HA + P + V++ GR D RL L+ L QGV ++ +R+ LD+ ++ Sbjct: 25 LVYGQHAAREAAAYDPAGVEAVWVEHGRRDARLERLLDKLGRQGVTVERVHRRVLDQMAE 84 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G HQGI+ R E +L DL+ + +P LL+LD V DPHNLGAC+RSA AAG H Sbjct: 85 GGNHQGIVLRYSGTPARGEGELADLVDAEPEPLLLVLDRVQDPHNLGACMRSAAAAGAHG 144 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V+ P+DR+A L+ K A GA + +P +VTNLART++ L++ + +VG AGEA+ + Y Sbjct: 145 VVAPRDRAAALSPAVHKTAAGAVQRIPFFQVTNLARTLQQLRDAGVHVVGAAGEAEKSCY 204 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + G LALV+G EGEG+RRLTRE CDE ++IPM GS+ SLNVSVA G+ LFEAVRQR Sbjct: 205 EVDLRGPLALVLGGEGEGLRRLTRERCDERVAIPMPGSMESLNVSVAAGVLLFEAVRQR 263 >UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJH8_9GAMM Length = 251 Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 121/242 (50%), Positives = 155/242 (64%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E GIHAV A+L+ APER + + + G + L L+ +++G+ ++ A R LD+ Sbjct: 10 GESFGGIHAVAAVLQHAPERVRLLQLASGTLEPALAQLLEQAQARGISVERAGRDKLDQH 69 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIAS-LDQPFLLILDGVTDPHNLGACLRSADAAG 120 G HQG+I P +E L + + LD +L+LDGVTDPHNLGACLR+ADAAG Sbjct: 70 HPGFQHQGVIVHCAPRPVVEEKALVQRVRNGLD--LVLVLDGVTDPHNLGACLRTADAAG 127 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 A++ P+ SA L A KVA GAAE+VP++ V NLART+ L++ +W VG G A Sbjct: 128 AGAIVTPRHHSAALTPAAIKVASGAAETVPVVAVGNLARTLAALKDAGMWTVGLDGAAHE 187 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 LY + A+VMGAEGEGMRRLTRE CD L IPM G+V SLNVSVATGI LFEA R Sbjct: 188 DLYAVDLRPPTAIVMGAEGEGMRRLTREACDHLARIPMGGTVESLNVSVATGITLFEARR 247 Query: 241 QR 242 QR Sbjct: 248 QR 249 >UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Gammaproteobacteria RepID=A1AWI4_RUTMC Length = 247 Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 111/242 (45%), Positives = 156/242 (64%), Gaps = 1/242 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S +I HAVQA L+ P F +VFIL R DKRL L + G+ +Q + LD+ Sbjct: 4 SIIITSFHAVQAQLKSNPTCFIKVFILNKRCDKRLNTLTSEFNNFGISVQRCTKIQLDKL 63 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAG 120 S+ HQG+ A + + +L ++ LD F+LILD + DP NLGACLRSA+AAG Sbjct: 64 SNHQTHQGVAAEILLPTLPDQGELISYVSKLDNAGFILILDSIQDPRNLGACLRSANAAG 123 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VH V++ K+ SA +N+ K + GA + + +VTNL+RT++ LQ++NIW++G G + Sbjct: 124 VHCVVINKNGSAPINSLVHKTSAGALNQLKIFQVTNLSRTIKALQQKNIWVIGLDGSVNI 183 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++YQ +T A++MGAEG G+RRLT++ CD+L IPM G V SLNVSVATG+ LFE R Sbjct: 184 SIYQIDLTIPNAIIMGAEGSGLRRLTKQSCDQLAKIPMQGKVESLNVSVATGVTLFEVNR 243 Query: 241 QR 242 QR Sbjct: 244 QR 245 >UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Acidithiobacillus RepID=B5EQA2_ACIF5 Length = 255 Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 119/244 (48%), Positives = 160/244 (65%), Gaps = 11/244 (4%) Query: 3 EMIYGIHAVQALLERAPERFQEVFI-LKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E +YGIHAV A L+ E E+++ ++ R D+R+ PL+ Q + +Q L K Sbjct: 4 ESLYGIHAVSAALD--AEELLELWVAVERRADERIAPLVQKAAEQRLPVQEWRSVALGRK 61 Query: 62 SDGAVHQGI--IARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADA 118 + HQG+ + R PG+ ++ ++A L+ FLL+LDGV DPHNLGACLRSA+A Sbjct: 62 LNTDRHQGVGGLLRAFPGQDFEA-----ILAQLNGCGFLLVLDGVLDPHNLGACLRSAEA 116 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AGV AVI+P+D + +NAT +K + G+A VP+ VTNL+RT+ LQE W+VG AGE Sbjct: 117 AGVDAVILPRDNACPVNATVRKASAGSASRVPVCTVTNLSRTLSSLQEAGFWLVGMAGEG 176 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 +LY + L +VMG E +G+RRLTREHCD L IPM G++ SLNVSVATGICLFEA Sbjct: 177 SRSLYALDLDMPLVMVMGGEEKGLRRLTREHCDYLAHIPMMGAIESLNVSVATGICLFEA 236 Query: 239 VRQR 242 RQR Sbjct: 237 ARQR 240 >UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alcanivorax RepID=Q0VMF8_ALCBS Length = 251 Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 122/248 (49%), Positives = 159/248 (64%), Gaps = 12/248 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILK---GREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M G HAV+ALL PE E+F+ R+D RL L+ A + G+ IQ A R+ L E Sbjct: 6 MYSGFHAVEALLRHRPEAVLELFVQDTRADRDDPRLAALMQAAKDFGIAIQRARREVL-E 64 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLD----QPFLLILDGVTDPHNLGACLRSA 116 K G +QGI+AR +P R E+ L + LD +P LL+L+ VTDPHNLGACLRSA Sbjct: 65 KHAGPQNQGIVARARPRRPLDESAL---LQWLDGKPAKPLLLVLENVTDPHNLGACLRSA 121 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA- 175 DAAGV AVIVP+ +A L A + A GAAES+ + NLA + L++ +W+VGTA Sbjct: 122 DAAGVQAVIVPRRNAAGLTPVACRTAVGAAESLAYYEIGNLASLLDQLRDRGVWVVGTAL 181 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 E +L+ + LA+VMGAEG G++RLTR+ CD+L+ IPMAG V SLNVSVATG+ L Sbjct: 182 EERSESLFTFQAPESLAVVMGAEGSGLKRLTRDKCDQLLEIPMAGEVQSLNVSVATGVML 241 Query: 236 FEAVRQRS 243 F+ QRS Sbjct: 242 FQVRAQRS 249 >UniRef50_Q8D323 YjfH protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D323_WIGBR Length = 250 Score = 210 bits (534), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 94/241 (39%), Positives = 157/241 (65%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M+E+IYGIH ++ ++ + + LK R+D + LI + + I+ ++++L++ Sbjct: 1 MNEIIYGIHVIEEFIKNKSNKILCILFLKSRKDIKFKKLILISNEKNIKIKFVDKKFLNK 60 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 ++ HQGI+A +K + +E L ++ + F LILDG+ DP NLG+C+RSA G Sbjct: 61 ITNNKKHQGIVAYIKNSKILKEPFLLKMLENKKNYFFLILDGIMDPRNLGSCIRSAYIFG 120 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V AVI+ K+RSA++++ KKVA G+ + +PLI VTNL RT+ +L++ NI I+GT+ +A Sbjct: 121 VQAVIIRKNRSAKISSAVKKVASGSLDLIPLIYVTNLVRTINLLKKYNIQIIGTSRKAQL 180 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + K+ +A+VMG+E G+ RL +E+CD +++IP + LN+SVATGIC+FE +R Sbjct: 181 DICNKKLKQSIAVVMGSENLGISRLVKENCDNILNIPTVKNNLPLNISVATGICIFEIIR 240 Query: 241 Q 241 + Sbjct: 241 K 241 >UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9X3_9GAMM Length = 243 Score = 202 bits (514), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 109/236 (46%), Positives = 149/236 (63%), Gaps = 4/236 (1%) Query: 7 GIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAV 66 GIH VQ LL A +++ ++ K L L+ +++GV ++ ++ G Sbjct: 9 GIHTVQQLL--ADGHVLRLYVADNKKSKNLTALVGEAQARGVPVETVALYEIEMMLPGVR 66 Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 HQG+ A V R Q D D IA +++P LL+LD + DPHNLGACLRSA AAGVHAV++ Sbjct: 67 HQGVAA-VSEARG-QAADWADAIAGVEKPLLLVLDSIQDPHNLGACLRSAAAAGVHAVLI 124 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 P R+A + +KVACGA E +PL RV+NL R + +Q + IW+VG AG A +LY + Sbjct: 125 PNSRAADVTPVVEKVACGATEILPLFRVSNLRREVERMQRQGIWVVGGAGGAAQSLYATD 184 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 +T LA+++G EGEG+R RE CD L+ IPMA + SLNVSVA G+ LFEA RQR Sbjct: 185 LTVPLAVIVGNEGEGIRHGLREQCDFLVQIPMAEGMESLNVSVACGVMLFEARRQR 240 >UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVP7_9PROT Length = 247 Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 106/243 (43%), Positives = 154/243 (63%), Gaps = 5/243 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ GIHAV+ L+ A + E+ I KG+ RL LIH + + ++ L ++ Sbjct: 3 VLAGIHAVKHALD-AGDSIDELLIEKGKHHPRLNELIHLAKKHSIRFSFVPKEALARLAE 61 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQ---PFLLILDGVTDPHNLGACLRSADAAG 120 G HQG++A++ + ++D P +L+LD VTDPHNLGAC+R+A+AAG Sbjct: 62 GVPHQGVVAKMVAAGAQAVPTFEAWLKTVDMETAPMVLLLDQVTDPHNLGACVRTAEAAG 121 Query: 121 VHAVIVPKDRSAQLNA-TAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 AVIV KD +A +++ K ACGA +P++RV N+ R + LQ++ W VG AGEA+ Sbjct: 122 CAAVIVLKDHAADVHSPVVAKAACGALSRLPVLRVINMKRCIEQLQQQGFWTVGLAGEAE 181 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 ++Y +K++G A+VMG+E +G+RRL RE CD+LI IPM G V SLNVSVATG+ LFE Sbjct: 182 LSIYDAKLSGATAVVMGSEDKGVRRLVRETCDQLIHIPMPGVVESLNVSVATGVALFEIN 241 Query: 240 RQR 242 RQR Sbjct: 242 RQR 244 >UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UR21_AKKM8 Length = 193 Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 98/162 (60%), Positives = 117/162 (72%) Query: 82 ENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKV 141 E L ++ P LLILD V DPHNLGA LR+AD AGV AVI P+D+S + T +V Sbjct: 32 EEVLDGILDKSSNPLLLILDCVQDPHNLGAILRTADGAGVDAVIAPRDKSVGITETVLRV 91 Query: 142 ACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEG 201 + GAAE VP I+VTNLARTM+ LQ IWI GT+ + D LY++ TG ALVMGAEGEG Sbjct: 92 SVGAAEKVPFIQVTNLARTMKQLQSRGIWIFGTSDKGDRGLYETDFTGPAALVMGAEGEG 151 Query: 202 MRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 MRRLT E+CD L+ IPM GS+ LNVSVATG+CL+E VRQRS Sbjct: 152 MRRLTEENCDFLLRIPMKGSIPCLNVSVATGVCLYEMVRQRS 193 >UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acidobacteria RepID=Q1ISZ4_ACIBL Length = 261 Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 105/243 (43%), Positives = 150/243 (61%), Gaps = 6/243 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++IYGIH V L+ FQ V I K R D R+ ++ G+ ++ R +LD + Sbjct: 2 DVIYGIHPVSEALKSRGRSFQYVAIAKDRMDPRVQRIVEDARESGITVRFLPRDFLDRTA 61 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASL--DQPFLLILDGVTDPHNLGACLRSADAAG 120 + +HQG+IA V ++Y DL D+I + F+++LDG+ DPHNLGA +RSAD AG Sbjct: 62 NTNMHQGVIA-VTSKKEYL--DLDDIIEKKRGEHAFVVVLDGIEDPHNLGALIRSADGAG 118 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE-NIWIVGTAGEAD 179 V V++P+ R+ + TA K + GAAE VP+ RVTN+AR++ L+++ N+W VG Sbjct: 119 VDGVVIPERRAVGVTGTAMKASAGAAEYVPIARVTNIARSIEDLKDKYNVWTVGLDERGT 178 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + LALV+GAEG+G+ L R+ CD L+ IPMAG VSSLNVSVA GI ++E Sbjct: 179 QNYDEIDYNMSLALVLGAEGKGLHDLVRKKCDLLVKIPMAGEVSSLNVSVAGGIVMYEVS 238 Query: 240 RQR 242 RQR Sbjct: 239 RQR 241 >UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSH6_DESOH Length = 256 Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 106/247 (42%), Positives = 146/247 (59%), Gaps = 11/247 (4%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLP---LIHALESQGVVIQLANRQYL 58 SE +YGIH V A + + +FI GRE ++ P + A E + + + L Sbjct: 7 SETLYGIHPVMAAITAGRRKVDTLFIASGRETRQ--PHQQALQAAEQHNIPVNEIPARDL 64 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIA---SLDQPFLLILDGVTDPHNLGACLRS 115 ++ + G VHQGI ARV Y L DL+A S D PF+L+ DG+TDPHNLGA R+ Sbjct: 65 EQMTGGKVHQGIAARVS---VYPFVPLADLLAAVPSTDTPFILVADGLTDPHNLGALART 121 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 A AGVH +I+PKD +A A K + GA E +P+ R TN+AR + L++ +WI G Sbjct: 122 ALCAGVHGLIIPKDNAASPTPAAVKASAGALEFLPVARETNIARVLDALKDAGLWIAGLD 181 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 G + T+Y S +TG LALV+G EG G+RRL + CD ++SIP V SLN SVA + + Sbjct: 182 GRGEQTIYDSDLTGPLALVVGDEGRGIRRLVGQKCDFILSIPQTDMVHSLNASVAGAVAM 241 Query: 236 FEAVRQR 242 +EA RQR Sbjct: 242 YEAFRQR 248 >UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes RepID=A3DH38_CLOTH Length = 277 Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust. Identities = 94/239 (39%), Positives = 150/239 (62%), Gaps = 3/239 (1%) Query: 8 IHAVQALLE--RAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 I ++LE +A ++ + KG ++ + +I +G+V+Q +R LD+ S Sbjct: 38 IEGRNSVLEAIKAGRTINKILVPKGEKEGSIRQIIALARERGIVVQETDRSNLDKISTTH 97 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSADAAGVHAV 124 HQG+IA V + +D+ + + P+++ILDG+TD +NLG+ LR+ADA G H V Sbjct: 98 AHQGVIAYVAFKDYVEVDDILKIAQDKGEDPYIIILDGITDAYNLGSILRTADAVGAHGV 157 Query: 125 IVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQ 184 ++PK R+ LNA K + GA E VP+ RVTN+++T+ L+++NIWIVGT + ++ Sbjct: 158 VIPKRRAIGLNAAVSKASAGAIEYVPVARVTNISQTIEYLKKKNIWIVGTDLSGEKPFFE 217 Query: 185 SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 + + G +ALV+G+EGEGM RL E CD +++IPM G +SSLN +VA I ++E RQR+ Sbjct: 218 ADLKGPVALVIGSEGEGMGRLVSEKCDFIVNIPMQGKISSLNAAVAAAIIMYEIRRQRN 276 >UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransferase yacO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUG1_SYNWW Length = 248 Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/247 (38%), Positives = 154/247 (62%), Gaps = 10/247 (4%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M E+++GI+AV L + R +++ + R+DKRL ++ + + +Q ++ +DE Sbjct: 1 MKELVFGINAVSEAL-KGQRRVYKIYAQRERQDKRLEEILTLAREKQLKLQYLEKKKMDE 59 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-----PFLLILDGVTDPHNLGACLRS 115 +G HQGIIA V+ +Y DL ++ L PFLL+LDG+ DP NLGA +R+ Sbjct: 60 LCEGK-HQGIIAEVE---RYPYADLGQVLEKLQAQKEKPPFLLLLDGIEDPQNLGAIIRT 115 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 A+ AGV +I+P +SA++N T +V+ GA E + +IR NL T++ L++E W++G Sbjct: 116 AECAGVDGIIIPSHKSAEVNPTVSRVSAGAVEHMAIIRENNLVNTIKYLKQEGFWVLGAD 175 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 +A + + + + ALV+G EG+G+RRL RE+CD L+ IPM G ++SLN SVA + + Sbjct: 176 AKARQSYFNTSIPSPTALVIGGEGQGIRRLVRENCDILVRIPMFGQLNSLNASVAAALLI 235 Query: 236 FEAVRQR 242 +E +RQR Sbjct: 236 YEVLRQR 242 >UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Firmicutes RepID=B8G1U5_DESHD Length = 246 Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 103/245 (42%), Positives = 152/245 (62%), Gaps = 11/245 (4%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDK-RLLPLIHALESQGVVIQLANRQYLDEK 61 E++YG +AV LL+ + +L+G R ++ +Q + Q ++ LD Sbjct: 4 EIVYGRNAVWELLQSGKPVNK--LLLQGEGTAGRFQDIVSHARAQKIPFQFVDKAALDRL 61 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIA----SLDQPFLLILDGVTDPHNLGACLRSAD 117 ++ A HQGI+A V P R+Y E D D++A + PF+L+LD V DPHNLGA +R+AD Sbjct: 62 TEKAKHQGILAYVAP-REYAEVD--DILALAGEKGEDPFILVLDEVEDPHNLGALIRTAD 118 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 AAGVH VI+PK RS L AT K + GA E V + RV NL +T++ LQ+ W+ G E Sbjct: 119 AAGVHGVIIPKRRSVSLTATVAKTSAGAVEHVLVARVGNLVQTLKDLQKAGCWVSGAEAE 178 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 +Y+S +TG +V+G+EG+G+ RL +E CDE++S+PM G ++SLN SVA I ++E Sbjct: 179 GTE-VYRSDLTGARVIVIGSEGKGLSRLVKETCDEIVSLPMKGRINSLNASVAGSILMYE 237 Query: 238 AVRQR 242 +RQR Sbjct: 238 VLRQR 242 >UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2HJX9_PEPMA Length = 244 Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 89/220 (40%), Positives = 138/220 (62%), Gaps = 3/220 (1%) Query: 25 VFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQEND 84 ++I KG + + G+ ++ +++Y+++ ++ HQG++A++ P Y D Sbjct: 23 IYIQKGELKGFIKKIEKKAYDMGIRVEYVDKKYIEKFAENTAHQGVMAKM-PSFGYSSVD 81 Query: 85 LPDLIASL--DQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVA 142 + A + PFL+ILD +TDPHNLG+ +R+A+ AG H VI+PK R+ ++NATA K + Sbjct: 82 EMIIYAKKINEDPFLIILDEITDPHNLGSIIRTAEVAGCHGVIIPKHRACEVNATAIKTS 141 Query: 143 CGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGM 202 GA ++ + RVTN+ T+ L+E NIWI G GEA T Q+ + G + LV+G EG+G+ Sbjct: 142 AGAVFNIKIARVTNITTTINYLKEHNIWIYGACGEASQTHTQANLKGPIGLVIGNEGKGI 201 Query: 203 RRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 RL RE+CD+LI IPM G SLN S A I ++E +RQR Sbjct: 202 SRLVRENCDQLIKIPMYGKTESLNASNAASILIYEIIRQR 241 >UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86 Tax=Bacteria RepID=YACO_BACSU Length = 249 Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 93/209 (44%), Positives = 131/209 (62%), Gaps = 8/209 (3%) Query: 39 LIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLD----Q 94 +I + QG+ IQ R+ LD+ G HQG++A+V Y+ +L DL + + Q Sbjct: 41 VIELAKKQGITIQYVPRKKLDQMVTGQ-HQGVVAQVAA---YEYAELDDLYKAAEEKNEQ 96 Query: 95 PFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRV 154 PF LILD + DPHNLG+ +R+ADA G H +++PK R+ L T K + GA E +P+ RV Sbjct: 97 PFFLILDELEDPHNLGSIMRTADAVGAHGIVIPKRRAVGLTTTVAKASTGAIEHIPVARV 156 Query: 155 TNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELI 214 TNLART+ ++E IW+VGT A LALV+G+EG+GM RL +E CD LI Sbjct: 157 TNLARTLEEMKERGIWVVGTDASAREDFRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLI 216 Query: 215 SIPMAGSVSSLNVSVATGICLFEAVRQRS 243 +PMAG V+SLN SVA G+ ++E R+R+ Sbjct: 217 KLPMAGKVTSLNASVAAGLLMYEVYRKRN 245 >UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter violaceus RepID=Q7MBB6_GLOVI Length = 338 Score = 183 bits (465), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 103/244 (42%), Positives = 150/244 (61%), Gaps = 6/244 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +E++YG +V A L+ + + K R D R L L+ A ++ G VI + + LD+ Sbjct: 90 AELLYGKQSVLAALQNSRPLNRVWLTEKLRYDPRFLRLLDAAKAGGAVIDIVEPRRLDQL 149 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASL---DQPFLLILDGVTDPHNLGACLRSADA 118 + G HQG+ A+ Y E + +LIASL P LL DG+ DPHNLGA +RSA+A Sbjct: 150 TAGGNHQGVAAQAA-AHPYVEFE--ELIASLVERPDPVLLAADGIEDPHNLGALIRSAEA 206 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G +I+P+ R+ + AT KVA GA E +P+ RVTNL + + L+E +VGT +A Sbjct: 207 FGFQGIILPQRRAVGVTATVAKVAAGAVEHLPIARVTNLNQAIERLKEAGYQVVGTQEKA 266 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 LY+ K+ G L +V+G+EG+G+ LT+ HCD ++SIP+AG +SLN SVA GI L+E Sbjct: 267 SQALYELKLDGPLVVVVGSEGKGISLLTQRHCDHMVSIPLAGKTTSLNASVAGGIMLYEV 326 Query: 239 VRQR 242 +RQR Sbjct: 327 MRQR 330 >UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Desulfuromonadales RepID=A1APM1_PELPD Length = 251 Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 94/242 (38%), Positives = 147/242 (60%), Gaps = 8/242 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E+++G++ V+ L E F +++ D RL ++ +GV + R+ L Sbjct: 4 ELVFGVNPVREALRGKREIFG-LYVQSTATDHRLDKILELARERGVRVIRREREDLTRMC 62 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQP----FLLILDGVTDPHNLGACLRSADA 118 + HQG+ +V P + DL DLI + D+ FLL+LDG+ DPHNLGA +R+A Sbjct: 63 GSSHHQGMALKVAP---FSYADLDDLIEAGDREDAAGFLLVLDGIQDPHNLGALIRTAAC 119 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AG V++P+DR+ + A+K + GA E++ + +VTN+A+++ L+ W+ G +GEA Sbjct: 120 AGASGVVIPRDRACAITPAAEKASAGAVETITVAQVTNIAQSLEKLKRSGYWVYGLSGEA 179 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 D +LY+ +G++ALV+G EGEG+R L R+ CD L+SIP+ G V SLN SVA GI L+E Sbjct: 180 DASLYEVAFSGKIALVIGGEGEGIRPLVRKQCDALVSIPLYGGVGSLNASVAGGIALYEV 239 Query: 239 VR 240 R Sbjct: 240 AR 241 >UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVE3_DICNV Length = 242 Score = 182 bits (462), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 98/239 (41%), Positives = 150/239 (62%), Gaps = 6/239 (2%) Query: 5 IYGIHAV-QALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 I GIHA+ QAL + R + + +G+ K L L+ ++ + I R Y+D + Sbjct: 6 IGGIHALRQALNDGNLLRLE---VSEGKTSKNLASLVADAKAAQIEIITVPRHYIDHRLP 62 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGI + Q ++ I+ +++PF+L+LD + DPHNLGACLR+A AAGV A Sbjct: 63 DVRHQGIAGECR--LSAQASNWQQAISGVERPFILVLDSIQDPHNLGACLRTAMAAGVDA 120 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++P +A + +K+ACGAAE++ + RV NL R + M++E+ +W+VG AGEA+ +L+ Sbjct: 121 VVLPNSCAADITPVVRKIACGAAEALAIFRVANLKREVEMMKEKGLWVVGGAGEAEKSLF 180 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++G L +++G E +G+ R+ CD L +IPMA ++ SLNVSVA GI LFEA RQR Sbjct: 181 DLDLSGGLVMIVGNEEKGIHYGLRQTCDWLAAIPMAETMESLNVSVACGIMLFEARRQR 239 >UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus RepID=Q2JI19_SYNJB Length = 378 Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 102/246 (41%), Positives = 147/246 (59%), Gaps = 9/246 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E+IYG V A L ++ V+IL K R + L L+ +++G VI + + L+ Sbjct: 106 EIIYGRQTVLAAL-KSQATLNRVWILPKLRYSPQFLSLLEEAKARGTVIDEVSPKRLNAL 164 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ----PFLLILDGVTDPHNLGACLRSAD 117 + GA HQGI A+ P YQ L DL+ Q P L++LDG+ DPHNLGA RS + Sbjct: 165 TAGANHQGIAAQATP---YQYVALEDLVERSRQAGPNPVLVVLDGIQDPHNLGAIARSVE 221 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A G+ +++P+ R+A + +T KVA GA ++P+ RV NL R + L+E+ W+ GT Sbjct: 222 AFGMQGMVIPQRRAAGVTSTVMKVAAGALSTLPVARVVNLNRALEYLKEQGFWVYGTTSR 281 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 +Y + +ALV+G+EGEG+ LT+ HCD+L+SIP+AG SLN SVA GI L+E Sbjct: 282 GADPIYSADFQRPIALVVGSEGEGISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYE 341 Query: 238 AVRQRS 243 RQRS Sbjct: 342 IHRQRS 347 >UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 Tax=Bacteria RepID=B8HJN1_CYAP4 Length = 387 Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 98/243 (40%), Positives = 144/243 (59%), Gaps = 2/243 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLDE 60 S++IYG H + A LE + + ++++ R D R L+ ++ GVVI + LD+ Sbjct: 126 SDLIYGRHTLLAALE-SERQLNRIWVVNQLRYDPRFHSLLLQAKAAGVVIDEVDYLRLDQ 184 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + A HQGI A+V P + + L + I LD P LL DG+TDPHNLGA +R+A+A G Sbjct: 185 ITAHAKHQGIAAQVAPYSYLELDTLLENIQGLDHPVLLAADGITDPHNLGAIIRTAEALG 244 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 ++VP+ R+ + +T KVA GA E + RV NL + + L+ WI G A A Sbjct: 245 AQGLVVPQRRAVGITSTVAKVAAGALEHFAVARVVNLNQALEQLKAAGFWIYGMAATAAK 304 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +Y + +G + LV+GAEG G+ L + +CD+L+SIP+ G SLN SVATG+ L+E R Sbjct: 305 PIYSVEFSGPVVLVVGAEGTGLSLLAQRYCDQLVSIPLLGKTPSLNASVATGMALYEIFR 364 Query: 241 QRS 243 QRS Sbjct: 365 QRS 367 >UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteria RepID=Q1D7V2_MYXXD Length = 282 Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 94/245 (38%), Positives = 147/245 (60%), Gaps = 4/245 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLL-PLIHALESQGVVIQLANRQYLDE 60 S +YG++ V A L P+ + +F+++G+ R L+ G+ ++ R+ L Sbjct: 34 SRFVYGVNPVLAALRARPDEVERLFLVEGQLGARAAGELLSRAREFGIRVEKVTRERLGT 93 Query: 61 KSDGAVHQGIIARVKPGRQYQE-NDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADA 118 ++G VHQG++ ++ G +Y E DL + +L QP +++LDG+ DPHNLGA +RSADA Sbjct: 94 LAEGGVHQGVVVELR-GFKYAELEDLLEAAKALGQPPLVVVLDGIQDPHNLGAIIRSADA 152 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G H V++ KDR+ Q+ T K + GA E + RV N++R + L+E +W+ +A Sbjct: 153 LGAHGVVIAKDRAVQVTGTVAKASAGAVEHSRIARVVNISRALEELKEAGLWVAAADVDA 212 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 ++ +++ G LALV+GAEG G+R +HCD + IPMAG V SLN SV+ GI L+E Sbjct: 213 KEPMWSARLDGPLALVVGAEGAGVRDGVLKHCDFRLRIPMAGQVGSLNASVSAGILLYEV 272 Query: 239 VRQRS 243 RQR Sbjct: 273 ARQRG 277 >UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTZ2_ALIAD Length = 255 Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/245 (41%), Positives = 150/245 (61%), Gaps = 12/245 (4%) Query: 2 SEMIYGIHAVQALLERAPER-FQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 ++++ G HAV A LE ER +V++ +G + ++ S+GVV+Q R LDE Sbjct: 20 ADLVKGRHAVLAALE--SERPVNKVWVAEGASG--MDAIVAKARSRGVVVQFVPRSRLDE 75 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIA--SLDQPFLLILDGVTDPHNLGACLRSADA 118 + + HQG+IA+V P Y DL D+I + P +++LD + DPHN GA LR+A+A Sbjct: 76 MA--SAHQGVIAQVAP---YAYVDLDDVIRRDTGFAPLVVVLDEIADPHNFGAILRTAEA 130 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 +G V++ K R AQ+ K A GA E++P+ RV N+A+ ++ L++ WIVG EA Sbjct: 131 SGAQGVVIGKRRQAQVTDVVAKAAAGALETLPVARVANVAQALQRLKQAGYWIVGADVEA 190 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + G A+V+G+EG+GMRR RE CD L+SIP+ G V SLN SVA G+ L+EA Sbjct: 191 KVPYTEVDYRGPTAVVIGSEGQGMRRWVREQCDFLVSIPILGRVQSLNASVAAGVLLYEA 250 Query: 239 VRQRS 243 VRQR+ Sbjct: 251 VRQRA 255 >UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bacteria RepID=Q31LC0_SYNE7 Length = 519 Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 104/245 (42%), Positives = 152/245 (62%), Gaps = 9/245 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E+IYG HAV A L+ +++ + R + L LI A ++ G V+ + + + Sbjct: 242 ELIYGRHAVLAALQ-GNRTLNRIWVTPRLRYESTFLELIDAAKAGGAVVDEVPVERIRQL 300 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIA----SLDQPFLLILDGVTDPHNLGACLRSAD 117 +DGAVHQGI A+V P Y +L DLIA + P +++ DG+TDPHNLGA +R+A+ Sbjct: 301 TDGAVHQGIAAQVAP---YPYQELSDLIAQAKAATTDPVIVVADGITDPHNLGAIIRTAE 357 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A G H +++P+ R+ + A KVA GA ES P+ RV NL R + L++ WI G AGE Sbjct: 358 ALGAHGLVIPQRRAVGVTAAVAKVAAGALESFPVARVVNLNRALEELKDAGFWIYGAAGE 417 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 A +++++ +G + LV+G+E EG+ LTRE CD LISIP+ G +SLN SVA G+ L+E Sbjct: 418 AKQSIHETSFSGPVVLVVGSEDEGLSLLTRERCDHLISIPLRGKTNSLNASVAAGMVLYE 477 Query: 238 AVRQR 242 RQR Sbjct: 478 VSRQR 482 >UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3 Length = 384 Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 142/242 (58%), Gaps = 3/242 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +++YG HAV A L+ + ++I R D R I ++ G V+ + L++ Sbjct: 124 DLLYGHHAVLAALD-GDRQLNRIWITSHLRHDIRYRTKIQTAKANGTVVDEVDNFRLNQI 182 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAAG 120 + A HQGI A+V P ++ DL D S P L+I+D +TDPHNLGA +R+A+A G Sbjct: 183 THNANHQGIAAQVAPYHYWELGDLIDKAKSQSTAPVLIIIDSITDPHNLGAIIRTAEAFG 242 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +++P+ R A + +T KVA GA E P+ RV NL+R + L+E WI GT Sbjct: 243 AQGMVLPQRRVAGITSTVMKVAAGALEHFPVARVVNLSRALETLKESGFWIYGTVAGKQT 302 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 L+Q+ + + LV+G+EGEG+ LT++HCD LI+IP+AG SLN SVA I L+E R Sbjct: 303 ALHQADLREPMGLVIGSEGEGLSLLTQKHCDHLITIPLAGKTPSLNASVAAAISLYEIFR 362 Query: 241 QR 242 QR Sbjct: 363 QR 364 >UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Deltaproteobacteria RepID=Q1NS81_9DELT Length = 302 Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/252 (40%), Positives = 144/252 (57%), Gaps = 15/252 (5%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + +++GIH V LL R P +++++ GR+D R+ ++ S + + +R L Sbjct: 45 ASLVWGIHPVTELLRRRPGLVRKLYLAGGRDDGRVAAIVELAASHRIPL---DRAGLPPA 101 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASL-----------DQPFLLILDGVTDPHNLG 110 + HQG+ ARV P +L + +L P LL+LD + DPHNLG Sbjct: 102 AAELPHQGVAARVAPPSPLSLAELLQRLPALGPAPASSPAAGPPPLLLVLDSLQDPHNLG 161 Query: 111 ACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIW 170 A LRSA A GV VI+PKDRSA L+ T K A G A + + R TNLA + L++ W Sbjct: 162 AVLRSAAAFGVDGVILPKDRSAPLSGTVLKAAAGTAALLDICRTTNLAGALGTLKKHGFW 221 Query: 171 IVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVA 230 I G +GEA LY++ TG LV+G E +G+R L ++HCD L++IP+A V SLNVSVA Sbjct: 222 IYGASGEASGNLYETDFTGPTCLVLGNEQKGIRPLLKKHCDFLLAIPLAAGVESLNVSVA 281 Query: 231 TGICLFEAVRQR 242 GI L E +R+R Sbjct: 282 AGIMLAE-IRRR 292 >UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y2_ACIC5 Length = 270 Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 100/244 (40%), Positives = 139/244 (56%), Gaps = 4/244 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRED----KRLLPLIHALESQGVVIQLANRQYL 58 +++YG+H V+ L +F V + + R+D ++L ++ S+GV ++ NR+ L Sbjct: 2 DVLYGLHPVEEALRAGSRKFDHVCVSRERQDHGAAQKLQRIVDLCRSEGVRLRFENREQL 61 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 + HQG++A V+ DL A LL LDGV DP NLGA LRSAD Sbjct: 62 TRMAKTHAHQGVVAVVRERSFLTIEDLMAAPADGHPHLLLALDGVEDPQNLGALLRSADG 121 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AGV V++P+ RSA L+A A K + GAAE + + RV NL R + L+E+NIW VG Sbjct: 122 AGVDGVLLPERRSAPLSAVAVKTSAGAAEHIRIARVVNLVRALEQLKEQNIWCVGLDERG 181 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + T +V+G EGEG+ L R+ CD L+ IPMAG VSSLNVS A + L+EA Sbjct: 182 TMSYDAYDWTTPSVVVLGREGEGLHDLVRKTCDHLVRIPMAGGVSSLNVSAAGAVVLYEA 241 Query: 239 VRQR 242 RQR Sbjct: 242 ARQR 245 >UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes RepID=A6LPP3_CLOB8 Length = 300 Score = 176 bits (445), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 91/241 (37%), Positives = 146/241 (60%), Gaps = 2/241 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +++ G +AV L R + ++I + + + ++ + ++I+ +++ LD Sbjct: 59 DIVIGRNAVIEAL-RGERTIEALYISNSKLEGSIKTIVGLAKENKILIKEVDKRKLDSMC 117 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAAGV 121 G VHQG+IA+V P + + +D+ DL + PF++ILD V DPHNLG+ +R+A+ GV Sbjct: 118 GGEVHQGVIAKVTPYKYSEVSDILDLAEKRGEAPFIVILDEVEDPHNLGSIVRTAELFGV 177 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H +I+PK RSA ++ T K + GA E V + +VTNL T+ L+E+ IWI G A+ Sbjct: 178 HGIILPKRRSASVSTTVYKSSVGAIEHVKIAKVTNLNSTIEELKEKGIWIYGADIRAEEY 237 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 YQ G A+++G EG G+ +LT E CD+LI IPM G ++SLN SVA GI ++E ++ Sbjct: 238 SYQVDFGGPCAVIIGNEGRGISKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMYEVLKG 297 Query: 242 R 242 R Sbjct: 298 R 298 >UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales RepID=Q3A6R3_PELCD Length = 246 Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 100/245 (40%), Positives = 154/245 (62%), Gaps = 2/245 (0%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M +IYG++ V L+ + E+ +L G E RL + A ++ V I+ +R+ LD Sbjct: 1 MGSLIYGVNPVLEALKSRQRKPLELLVLHGAESSRLSAVCEAARARRVAIRSLDRRELDA 60 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRSADAA 119 ++GA HQG+ R++ DL DL + + +L+LDG+TDPHNLGA RSA+A Sbjct: 61 LAEGARHQGVALRLESQSVIALEDLLDLWRNAGGKGVILVLDGITDPHNLGALARSAEAV 120 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA- 178 G +++PKDRS + A A+K + GA +P+ RVTN+AR++ + ++ W+ G AG+A Sbjct: 121 GCQGIVLPKDRSCPITAAAEKASAGALAYLPVCRVTNVARSLEVFKQAGFWVYGLAGDAG 180 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 +LY + + G + LV+G EG+G+R R+HCD L++IPM G VSSLN SVA G+ LFE Sbjct: 181 SQSLYDTDLRGNVVLVVGGEGKGLRDNVRKHCDALLAIPMRGQVSSLNASVAGGVALFEV 240 Query: 239 VRQRS 243 +RQ++ Sbjct: 241 LRQQT 245 >UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXE5_DESAC Length = 244 Score = 173 bits (438), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 99/242 (40%), Positives = 141/242 (58%), Gaps = 7/242 (2%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS+ ++G++AV L + R ++ + + RL ++ + V ++ R+ LD+ Sbjct: 1 MSQYLFGLNAVFEALGQG--RKVVALYVEAQRNPRLEEIVAQATERHVAVKQCERRQLDK 58 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP--FLLILDGVTDPHNLGACLRSADA 118 HQG++A+VK L L+A Q F LILDG+TDPHN GA +RSA A Sbjct: 59 MVGDVRHQGVVAQVKA---QDFVSLAQLLAQSSQSERFFLILDGITDPHNFGALIRSAAA 115 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AG VI KDRS + +K A G V L +VTNL R + L++ +W+ G AGE Sbjct: 116 AGCQGVIFAKDRSCPVTGIVEKTAAGTLGYVQLCQVTNLGRAIEELKKAGVWVYGLAGEE 175 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 +L+++ ++ +ALV G+EG G+R L R+ CD LI+IPM G V SLNVSVATGI LFE Sbjct: 176 GQSLFEAPLSAPIALVAGSEGRGIRPLIRKLCDGLIAIPMPGRVESLNVSVATGIALFEV 235 Query: 239 VR 240 VR Sbjct: 236 VR 237 >UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMK8_9FIRM Length = 282 Score = 172 bits (436), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 94/223 (42%), Positives = 139/223 (62%), Gaps = 6/223 (2%) Query: 23 QEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQE 82 ++VFI G++D RLL L E GV + LD ++G HQG+ A +KP Y Sbjct: 64 KKVFIKSGKKDGRLLALAEEAERLGVAAIETEERTLDRLTEGVRHQGVAASLKP---YAY 120 Query: 83 NDLPDLIASLDQ--PFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKK 140 DL ++++S ++ P L++LDGV D N+GA +R+A+ AG AV++PK RS+ + A A K Sbjct: 121 ADLEEVLSSCERKDPLLILLDGVEDVRNIGAIVRTAECAGAAAVLLPKHRSSPVTAAAMK 180 Query: 141 VACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGE 200 A GA +P+ ++ N+ +T+ L+E W VG + LYQ+ + G L +VMGAEG+ Sbjct: 181 TASGAFAYLPVCQIGNIRQTLEKLKERGFWAVGADMDGGD-LYQADLKGPLVIVMGAEGK 239 Query: 201 GMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 G+ LT+ CD + IPM G VSSLNVSVA + ++EAVRQR+ Sbjct: 240 GISPLTKRMCDFCVRIPMRGKVSSLNVSVAAALLMYEAVRQRN 282 >UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH Length = 244 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 85/222 (38%), Positives = 133/222 (59%), Gaps = 1/222 (0%) Query: 22 FQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQ 81 +++FI +G K++ +I + +Q A + +LD+K+ HQGIIA + Sbjct: 20 IKKIFIQEGVRGKKVDRIIKEASRFNIPLQKAKKDFLDKKARSHSHQGIIAMADDIKYVS 79 Query: 82 ENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKK 140 ++ ++ + PF++ILD V DPHNLGA +R+A AAG H +I P+ RSA + K Sbjct: 80 PREMVEIAREKGEDPFIIILDQVQDPHNLGAIIRTAYAAGAHGLIYPRKRSADITPVVTK 139 Query: 141 VACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGE 200 + GA +PL +V+N+ T+ L++ +WI GT Y + G + LV+G EG+ Sbjct: 140 ASAGAVNHLPLAKVSNINYTIADLKDMGLWITGTDVRGTRPYYSADYKGPVGLVIGNEGK 199 Query: 201 GMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 GMRRL +E+CD +++IPM+G + SLN SVA G+ +FE VRQR Sbjct: 200 GMRRLVKENCDFVVNIPMSGELGSLNASVAAGVVIFEVVRQR 241 >UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IX93_NOSP7 Length = 363 Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 93/246 (37%), Positives = 142/246 (57%), Gaps = 8/246 (3%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 +++IYG H V + L++ ++I + R D + + G VI + LD Sbjct: 106 NDIIYGRHPVLSALQKQ-RNLNRIWITTRLRYDPSFHHFLLQAKENGTVIDEVEPKRLDY 164 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLI---ASLDQPFLLILDGVTDPHNLGACLRSAD 117 ++GA HQG+ A+ P Y +L DLI S+ P +++ DG+TDPHNLGA +R+A+ Sbjct: 165 LTNGANHQGVAAQTAP---YGYIELADLIEQSKSVTDPVIVVADGITDPHNLGAIIRTAE 221 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A G +++P+ R++ + +T KVA GA E+ + RV NL+R + L+E WI GTA Sbjct: 222 AIGAQGLVIPQRRASGITSTVMKVAAGALENFTVSRVVNLSRALEELKEAGFWIYGTAAS 281 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 ++ G + LV+G+EGEG+ LT+ CD L+SIP+ G SLN SVA G+ L+E Sbjct: 282 GSEPVHTVNFKGPIVLVIGSEGEGLGMLTQRSCDFLVSIPLQGKTPSLNASVAAGMALYE 341 Query: 238 AVRQRS 243 RQRS Sbjct: 342 IYRQRS 347 >UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC37_HELMI Length = 256 Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 89/221 (40%), Positives = 132/221 (59%), Gaps = 3/221 (1%) Query: 22 FQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQ 81 ++ + KG + + ++ +G+ I R LD + HQGIIA V P + Sbjct: 29 INKLVVAKGAREGSIREILGMARDRGIPITELERTVLDREVRH--HQGIIAHVAPVAYVE 86 Query: 82 -ENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKK 140 E L A + PF+L+LDG+ DPHN+GA LR+A+ AG H VI+PK R + +T K Sbjct: 87 VEEILEKAKAKGEPPFVLLLDGLEDPHNIGALLRTAEGAGAHGVIIPKRRGGAITSTVAK 146 Query: 141 VACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGE 200 + GA E VP+ RVTNL +T+ L++ +WI+G+A +A ++ G + L++G+EG+ Sbjct: 147 ASAGAVEYVPIARVTNLVQTVGQLKKAGLWIIGSAMDAPRPYFRQDFRGPVGLIVGSEGK 206 Query: 201 GMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 G+ L REHCD L+SIPM G V SLN SVA + ++E VRQ Sbjct: 207 GISPLLREHCDHLVSIPMGGKVDSLNASVAGALLMYERVRQ 247 >UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Deinococci RepID=Q1IWR8_DEIGD Length = 246 Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 7/240 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG + V L R EV + +G E+ + +L++ V ++ A R LD+ + Sbjct: 2 LLYGRNPVLEALRDG--RVTEVLVARGVEE----AFVRSLKAFDVRLRFAPRIELDQLAG 55 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLIL-DGVTDPHNLGACLRSADAAGVH 122 HQG+IA V+ +D+ D + + L++L DG+TDP N GA +RSA+ G H Sbjct: 56 TTQHQGVIAEVEDLAWATVDDILDRAEARGEDLLIVLLDGITDPRNFGAIIRSAEVLGAH 115 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 V+V + RSA L+ K A GA +P+ + NL R + L+E+ +WI G AGEA + Sbjct: 116 GVVVEERRSAPLSPVVVKTAAGATSYLPVAQTKNLPRLIDALKEDGVWIYGAAGEAAQDI 175 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++ ++G++ALV+GAEGEG+RRL RE CD L+ IP G V SLN SVA GI L+EA R R Sbjct: 176 GRTDLSGKVALVIGAEGEGLRRLVREKCDALVRIPTRGQVQSLNASVAAGILLYEAARAR 235 >UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Thermotogaceae RepID=A9BJB6_PETMO Length = 240 Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 88/240 (36%), Positives = 146/240 (60%), Gaps = 8/240 (3%) Query: 5 IYGIHAVQALLE-RAPERFQEVFILKGREDK-RLLPLIHALESQGVVIQLANRQYLDEKS 62 IYG + ++ ++E R P + +F + ++ L ++ + + G + + L++ + Sbjct: 3 IYGKNILKEIIEARYP--VKHIFFSSSKTERGSLKEIVEDVANLGYSYSFSPNEVLEKMA 60 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQGI+ + G ++ +L D+I ++ FL+ILD + DPHN GA +R++ AAGV Sbjct: 61 LTNKHQGIVIDI--GNDFKYENL-DIIEGKEKLFLVILDQIQDPHNFGAIVRTSVAAGVD 117 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+I+PKD + ++ KV+ G +P+I+VTNL+ T+ L++EN+W+ G E Sbjct: 118 AIIIPKDNAVEVTPVVIKVSSGQIFKIPIIKVTNLSNTIETLKKENVWVYGADVEG-KPY 176 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 Y+ G++ LV G EG G+R+ + HCDEL+SIPM +V SLNVSV++GI LFEA +QR Sbjct: 177 YEIDWQGKICLVFGNEGNGIRKNVKNHCDELVSIPMFNNVESLNVSVSSGIILFEAKKQR 236 >UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQ81_SYNAS Length = 249 Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 90/243 (37%), Positives = 139/243 (57%), Gaps = 7/243 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E+IYG++ ++ L E + + +GR + + + + +G+ +++ R +LD+ + Sbjct: 2 EVIYGVNPLREALISGGEGVTRIVVARGRSESSISEIRTLAKQRGIPVEIRERSFLDDLA 61 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIA----SLDQPFLLILDGVTDPHNLGACLRSADA 118 A HQG++ Y+ DL +IA S +LILDG+ DPHNLGA +RSA Sbjct: 62 GHASHQGVLGVCT---AYRYQDLDAVIANRHPSCPYDLVLILDGILDPHNLGALIRSAHC 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G + +I+P+ R+A + T K + GAA +P+ RV NLAR + L+ + WI G A Sbjct: 119 FGANGIILPERRAASVTGTVIKTSAGAARHIPIARVANLARALDELKTKGFWIFGADARA 178 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 D ++ G + LVMG E +G+R L R+ CD+LISIPM G + SLNVSV+ GI L E Sbjct: 179 DQSVSDPDYQGAVGLVMGGESKGLRPLIRKKCDDLISIPMLGKIDSLNVSVSGGIILHEI 238 Query: 239 VRQ 241 R+ Sbjct: 239 RRK 241 >UniRef50_A7BZJ1 SpoU rRNA Methylase family n=1 Tax=Beggiatoa sp. PS RepID=A7BZJ1_9GAMM Length = 141 Score = 169 bits (427), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 76/130 (58%), Positives = 101/130 (77%) Query: 113 LRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV 172 +R+AD AG+ A+IVPK+ + +L + VACGAA++VPLI VTNLART+R LQE+ +WIV Sbjct: 1 MRTADVAGIQAIIVPKNNAVKLTSIVHAVACGAADNVPLIEVTNLARTLRWLQEQGVWIV 60 Query: 173 GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATG 232 GT + +L+++ +TG LA V G+EG G+RRLT+E CD L+ IP G + SLNVSVATG Sbjct: 61 GTDENSQESLFETNLTGPLAFVFGSEGTGLRRLTKETCDILVRIPSLGKIKSLNVSVATG 120 Query: 233 ICLFEAVRQR 242 ICL+EAVRQR Sbjct: 121 ICLYEAVRQR 130 >UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8A8_9BACT Length = 269 Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/241 (38%), Positives = 138/241 (57%), Gaps = 6/241 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ +G + V LLE PE ++VF+L G +D+ + + + R+ L+ S Sbjct: 22 DLCWGRNPVLTLLEHRPELCRKVFLLAGAQDEFRDTVARLCADGRIPLDFVEREELERLS 81 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLD---QPFLLILDGVTDPHNLGACLRSADAA 119 GAVHQG+ ARV P DL ++ +LD +++LD DPHNLGA +R+A+ A Sbjct: 82 GGAVHQGVAARVAP---IPPADLDGVVDALDPQAPALIVLLDHCQDPHNLGAVIRTAEVA 138 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G V+ DRSA +N T K + GAA +P+ +V N+ R + L+ + W+VG D Sbjct: 139 GAACVVCQNDRSATVNGTVVKTSAGAAFRLPVAQVVNVGRAVERLKRKGFWVVGLDHRTD 198 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 T++ S + RLALV+G+EGEG+ LT + CD L+ PMAG +LN SVA + +FE V Sbjct: 199 ETVWSSALPERLALVVGSEGEGISALTAKKCDMLVKFPMAGRTGNLNASVAAALGMFEWV 258 Query: 240 R 240 R Sbjct: 259 R 259 >UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WGA5_9SYNE Length = 365 Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 90/244 (36%), Positives = 141/244 (57%), Gaps = 9/244 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFI-LKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++IYG HAV+A +E A +++ K D PLI ++ G V+ L + Sbjct: 97 DLIYGRHAVEAAIE-AGRSLNRLWVNAKLHYDSHFRPLIATAKANGSVVDEVENVRLSQM 155 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLD----QPFLLILDGVTDPHNLGACLRSAD 117 + GA HQGI+A+V Y+ DL L+ +P ++ DG+TDPHNLGA +RSA+ Sbjct: 156 TQGASHQGIVAQVS---AYEYVDLEVLVQQAKNKARRPVIVAADGITDPHNLGAIIRSAE 212 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A G +++P+ R+ + +T KV+ GA E++P+ RV NL R + L+ + WI G E Sbjct: 213 AIGAQGIVIPQRRAVGVTSTVAKVSAGALENIPIARVINLGRALEYLKSNSFWIYGLTAE 272 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 A +++ + + + LV+GAEG G+ + CD+L+SI ++G SLN SVATG+ L+E Sbjct: 273 AAQSIHTTDFSAPVVLVVGAEGSGLSLSVQNLCDQLVSIELSGKTPSLNASVATGMALYE 332 Query: 238 AVRQ 241 RQ Sbjct: 333 IYRQ 336 >UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria RepID=Q3AXD9_SYNS9 Length = 652 Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 97/246 (39%), Positives = 141/246 (57%), Gaps = 13/246 (5%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++I+G HA QA LE + + R + L L+ ++ GV+++ L + + Sbjct: 290 DLIWGRHASQAALESGRPIHRIWCTPEMRSAPKFLQLLREAKTSGVLVEEVTWARLAQVT 349 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLD-------QPFLLILDGVTDPHNLGACLRS 115 G+VHQGI Q D DL A ++ P LL LDG+TDPHNLGA +RS Sbjct: 350 GGSVHQGIAL------QTAAADTLDLSALIEGCSELGEPPLLLALDGITDPHNLGAVVRS 403 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 A+A G H +++P+ RSA L +A KVA GA E +P+ RV NL R++ L++ ++G A Sbjct: 404 AEAMGAHGLVLPQRRSAGLTGSAAKVAAGAMEHLPVARVVNLNRSLEKLKDSGYRVIGLA 463 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 E D TL + G L LV G+E +G+ LTR HCD+L+ IP+ G SLN SVAT +C+ Sbjct: 464 AEGDVTLMDVDLEGPLVLVTGSEDQGLSLLTRRHCDQLVRIPLRGITPSLNASVATALCV 523 Query: 236 FEAVRQ 241 +E R+ Sbjct: 524 YEVARR 529 >UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A6BKK3_9FIRM Length = 265 Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 87/241 (36%), Positives = 138/241 (57%), Gaps = 10/241 (4%) Query: 8 IHAVQALLE--RAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 I A++E R+ + ++++L G +D + +I ++ + L++ S+ Sbjct: 27 IEGRNAVMEAFRSGKPVDKLYVLDGCQDGAVRSIIREARKHDTILNFVEKDRLNQLSETG 86 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQ----PFLLILDGVTDPHNLGACLRSADAAGV 121 HQG+IA V Y+ ++ D++ ++ PFL+ILD + DPHNLGA +R+A+ AG Sbjct: 87 KHQGVIASVAA---YEYAEVEDMLKLAEEKGEDPFLIILDNIEDPHNLGAIIRTANQAGA 143 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H VI+PK R+ L AT + + GA P+ +VTNL +TM L+++ +W V + D Sbjct: 144 HGVIIPKRRAVGLTATVARTSAGALNYTPVAKVTNLVKTMEDLKKKGLWFVCADMDGD-V 202 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +Y M G + LV+G EGEG+ RL ++ CD IPM G + SLN SVA G+ +E VRQ Sbjct: 203 MYDVNMKGPIGLVIGNEGEGVGRLVKDTCDFTARIPMKGDIDSLNASVAAGVLAYEIVRQ 262 Query: 242 R 242 R Sbjct: 263 R 263 >UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lactobacillales RepID=Q1J4P0_STRPF Length = 257 Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/242 (37%), Positives = 139/242 (57%), Gaps = 5/242 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++++YG+HAV L+ +++I + K++ + + V I ++ L + Sbjct: 19 NDIVYGVHAVTESLQ--ANTGNKLYIQEDLRGKKVDNIKSLATQKKVAISWTPKKTLSQM 76 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 +DGAVHQG + RV +++ ++ P +LILDG+TDPHNLG+ LR+ADA V Sbjct: 77 TDGAVHQGFVLRVSAFAYTDVDEILEIAEQEANPLILILDGLTDPHNLGSILRTADATNV 136 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+PK RS + K + GA E +P+ RVTNL++T+ L+ WI GT + + T Sbjct: 137 CGVIIPKHRSVGVTPVVSKTSTGAVEHIPIARVTNLSQTLDKLKARGFWIFGT--DMNGT 194 Query: 182 LYQSKMT-GRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 T G+LALV+G EG+G+ ++ DE+I+IPM G V SLN SVA I ++E R Sbjct: 195 PSDCWNTNGKLALVIGNEGKGISTNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFR 254 Query: 241 QR 242 R Sbjct: 255 NR 256 >UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli RepID=Q1G8Z2_LACDA Length = 255 Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/245 (36%), Positives = 141/245 (57%), Gaps = 8/245 (3%) Query: 2 SEMIYGIHA-VQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 ++ ++G HA + L + E+ +VF+ +G ++ + + + ++IQ + LD+ Sbjct: 12 NDFVFGRHAGIDFLKTQDSEKINKVFLAEGVQEDFAREVYRYAKKKHLIIQRVPKNKLDK 71 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ---PFLLILDGVTDPHNLGACLRSAD 117 + G HQG++ V ++ D L+ LDQ P LL+LD + DPHNLG+ LRSAD Sbjct: 72 LTGGENHQGLVLAVA---SFEYADFDQLLDKLDQEEAPLLLMLDNIEDPHNLGSILRSAD 128 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A GV VI+PK R++ L + K + GA + VP+ RV NL +T + L++ WI GTA E Sbjct: 129 ATGVSGVIIPKRRASGLTSVVAKTSTGAIDHVPVARVNNLVQTCQALKDRGYWIFGTAME 188 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 D + G+ LV+G EG+G+ L + D+ ++IPM G V SLN SVATG+ L++ Sbjct: 189 GD-DYRKWNANGKTVLVIGNEGKGISPLLLKQMDQTLTIPMIGHVQSLNASVATGVLLYQ 247 Query: 238 AVRQR 242 A R Sbjct: 248 AFNSR 252 >UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEV3_DESAA Length = 249 Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 86/244 (35%), Positives = 146/244 (59%), Gaps = 8/244 (3%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +E++YG+H V+ L +FQ V++ + R + ++ +G+ ++ ++ + + Sbjct: 3 TELLYGMHPVREALLAGKRQFQAVYVSESRTGEGKEDILSLARERGIEVKTPDQSFFKGQ 62 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLI--ASLDQP-FLLILDGVTDPHNLGACLRSADA 118 G QG+ ARV ++ L L+ A +QP F L++D + DP N GA +R+A Sbjct: 63 DRGG--QGVAARVS---LFKPIALELLVKKAGGEQPLFFLLMDEINDPQNCGALMRTALC 117 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AGV+ VI+P RS+ L+ K + GA E +P+ RV NL R+M+ L+++ +W G A Sbjct: 118 AGVNGVIMPDKRSSPLSPAVSKASAGALEHMPVARVVNLVRSMQYLKDQGVWFFGLDARA 177 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 T++++ +TG A+V+G EG+G+R L R+ CD+L+SIP AG + SLN SVA + ++E Sbjct: 178 SGTVWEADLTGPAAVVVGNEGKGLRPLVRKECDQLVSIPQAGPLGSLNASVAGALSMYEV 237 Query: 239 VRQR 242 +RQR Sbjct: 238 MRQR 241 >UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase n=86 Tax=Firmicutes RepID=TRMHL_STAAC Length = 248 Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 94/246 (38%), Positives = 145/246 (58%), Gaps = 15/246 (6%) Query: 4 MIYGIHAV-QALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +I G HAV +A++ P ++ I +G + +++ ++ + Q +++Q + LD + Sbjct: 5 VIVGRHAVREAIITGHP--INKILIQEGIKKQQINEILKNAKDQKIIVQTVPKSKLDFLA 62 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQP----FLLILDGVTDPHNLGACLRSADA 118 + A HQG+ A + P Y+ D + + +LILDG+ DPHNLG+ LR+ADA Sbjct: 63 N-APHQGVAALIAP---YEYADFDQFLKQQKEKEGLLTVLILDGLEDPHNLGSILRTADA 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE- 177 GV VI+PK RS L T K + GA E VP+IRVTNLA+T+ L++ W+ GT Sbjct: 119 TGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWVAGTEANN 178 Query: 178 -ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 D+ ++ M+ LA+V+G+EG+GM RL + CD I IPM G V+SLN SVA + ++ Sbjct: 179 ATDYRNLEADMS--LAIVIGSEGQGMSRLVSDKCDFYIKIPMVGHVNSLNASVAASLMMY 236 Query: 237 EAVRQR 242 E R+R Sbjct: 237 EVFRKR 242 >UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TM87_9BACT Length = 269 Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 91/241 (37%), Positives = 131/241 (54%), Gaps = 9/241 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ +G +AV ++LE P +++++ G + L+ V + AN YLDE + Sbjct: 29 DLCWGRNAVISMLETVPSACKKIYLATGIQTTFRDDLLSLAGKNAVEVTEANGSYLDEIT 88 Query: 63 DGAVHQGIIARV---KPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 G HQGI+A + KP DL LL +D V DPHN GA +R+A+A Sbjct: 89 GGEKHQGIVANIDLPKP------RDLSQFSPKKGPSLLLAMDHVKDPHNFGAMIRTAEAV 142 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G VI P RS + T K + GAA VPL VTNL R+M +L++E W+VG E Sbjct: 143 GALGVIYPSRRSVGVTGTVIKTSAGAAFRVPLYEVTNLVRSMEILKKEGYWVVGLDHEEP 202 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 ++ S + +L L++G+EGEG+ RL+ E CD+L IPM G SLN SVA + +FE Sbjct: 203 RDIWSSPLPDKLVLMVGSEGEGLSRLSSERCDDLRRIPMVGKTGSLNASVAAALGMFEWR 262 Query: 240 R 240 R Sbjct: 263 R 263 >UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Anaerococcus RepID=C7REQ2_ANAPD Length = 234 Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 90/239 (37%), Positives = 142/239 (59%), Gaps = 10/239 (4%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 + IYG V L+ + ++ +ILK + K + +I L + + I ++++ D+ Sbjct: 2 DKIYGRKPVLDTLDTDIKVYK-AYILK-QNSKLVDKIIDKLNQKNIEISFVDKRFFDKID 59 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG++ V+ + D L+ILD + DPHNLGA +RSA++ G Sbjct: 60 --MNHQGVMLEVESFKYSSL------EDLSDSSRLIILDKIEDPHNLGAIIRSAESFGFD 111 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AVI+P+ RSA + +T K + GA ++ ++RVTNL RT++ L+++ WI G AGEA + Sbjct: 112 AVIIPERRSASVTSTVYKTSAGAINNIKVVRVTNLTRTIKDLKDKGFWIYGLAGEAHSDI 171 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + + G++ LV+G EGEG+ RL RE+CD LI+IPM G V+SLN SVA I ++E +RQ Sbjct: 172 SHADLRGKVGLVVGNEGEGISRLVRENCDMLINIPMLGRVNSLNASVAAAISMYELLRQ 230 >UniRef50_C0QBT7 RNA methyltransferase (TrmH family protein, group 3) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBT7_DESAH Length = 253 Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 81/241 (33%), Positives = 138/241 (57%), Gaps = 1/241 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E++ GIH ++ L +F + + K R RL ++ + Q + +++ + LD + Sbjct: 9 EILCGIHPIREALRAGRRKFYAILVSKDRSRARLAEILGVAQEQSIPVEITDTMTLDALT 68 Query: 63 DGAVHQGIIARVKPGRQYQ-ENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 D A HQG+ ARV P + E + + + F+L+++ + DP N GA +R+A AGV Sbjct: 69 DNARHQGVAARVSPFATVRAEGIVKQMPKGVSNRFILVIETLEDPQNFGALIRTALCAGV 128 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +++PK+RSA + + + + GA E + +TN A +R L+ W+ G G+ Sbjct: 129 DHIMIPKERSASPSPSVSRASAGAMEHAEISLITNTAGLLRQLKAMGFWVAGLDGQGTTP 188 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L+ + +TG L LV+G E +G+R L ++ CD L+S+P+ V+SLN SVA GI ++EA+RQ Sbjct: 189 LFSADLTGNLVLVVGGEHKGIRPLVKKECDFLVSLPIKAGVTSLNASVAGGIAMYEALRQ 248 Query: 242 R 242 R Sbjct: 249 R 249 >UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodothermaceae RepID=Q2S2J6_SALRD Length = 253 Score = 162 bits (410), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 90/207 (43%), Positives = 122/207 (58%), Gaps = 8/207 (3%) Query: 44 ESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQEND--LPDLIASLD-----QPF 96 + +G +Q L +SDGA HQG++A P R Y+E D L D+ + D QP Sbjct: 48 DDRGTPVQYVPEARLRHESDGATHQGVVAITAPIR-YREVDAMLSDIAPTWDAVQTAQPM 106 Query: 97 LLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTN 156 LL++D VTDP N GA LRSA AAG VIVP A LNA A K + G A +P+ R + Sbjct: 107 LLVVDRVTDPRNFGAMLRSAVAAGTDGVIVPTREMAPLNAAAIKASAGTAPRIPIARTDD 166 Query: 157 LARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISI 216 L R + L+E ++ G G A+ L+ + +A+V+G+EG+G+ E CDEL+SI Sbjct: 167 LPRVLTQLKERGYFVYGAEGTAETPLWDADWDRPVAVVLGSEGQGLAPEVAEACDELLSI 226 Query: 217 PMAGSVSSLNVSVATGICLFEAVRQRS 243 PM G SLNVSVATG+ +FEA R R+ Sbjct: 227 PMRGPAESLNVSVATGLLVFEAARSRT 253 >UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase n=10 Tax=Bacilli RepID=TRMHL_STAHJ Length = 249 Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 93/245 (37%), Positives = 142/245 (57%), Gaps = 13/245 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G HAV+ + +++I +G +++ ++ + Q +++Q + LD ++ Sbjct: 5 VIVGRHAVKEAIVSG-HTINKIWIQEGIRKQQINDILQNAKEQKLIVQTVPKSKLDNLAN 63 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQ----PFLLILDGVTDPHNLGACLRSADAA 119 A HQG+ A + P Y+ D I S ++ILDG+ DPHNLG+ LR+ADA+ Sbjct: 64 -APHQGVAALIAP---YEYADFDQFIQSQKDKEGLSTVVILDGLEDPHNLGSILRTADAS 119 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 GV VI+PK RS L T K + GA + VP++RVTNLA+T+ L+E W+ G EAD Sbjct: 120 GVDGVIIPKRRSVALTQTVAKASTGAIQHVPVMRVTNLAKTIDELKEHGYWVAG--AEAD 177 Query: 180 HTLYQSKMTGR--LALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 + M LA+V+G+EG+GM RL ++ CD I IPM G V+SLN SVA + ++E Sbjct: 178 NATDYRDMAADMPLAIVIGSEGQGMSRLVKDKCDFYIKIPMVGHVNSLNASVAASLMMYE 237 Query: 238 AVRQR 242 R+R Sbjct: 238 VYRKR 242 >UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clostridia RepID=Q2RFM6_MOOTA Length = 246 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 99/247 (40%), Positives = 145/247 (58%), Gaps = 9/247 (3%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M+E + G + V+ L RA ++ + E + + +I+ +GV +Q NR L E Sbjct: 1 MTETLAGRNQVREAL-RAGRPLNKILLAPHLEGQAIGEIINLARERGVPLQRVNRAAL-E 58 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ----PFLLILDGVTDPHNLGACLRSA 116 K G HQG++A + R+Y DL DL+A + PFL++LD V DPHNLGA LRSA Sbjct: 59 KLAGHHHQGVVA-LAAAREYA--DLEDLLARAGEAGEPPFLIMLDRVEDPHNLGAILRSA 115 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 +A G H VI+P+ R L A + A GA E VP+ RVTNLART+ L+ + +W +G AG Sbjct: 116 EAVGAHGVIIPRRRGVGLTAAVARAAVGAQEYVPVARVTNLARTLEELKGKGLWAIGAAG 175 Query: 177 EADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 +A + + T L LV+G+EG G+ L R CD + +PM G ++SLNV+ A + ++ Sbjct: 176 DAGQEAFNADFTVPLVLVLGSEGRGLSPLVRSRCDFTVHLPMRGRINSLNVATAATVLMY 235 Query: 237 EAVRQRS 243 E +RQR Sbjct: 236 EVLRQRG 242 >UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyanobacteria RepID=A2C1X9_PROM1 Length = 442 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 93/243 (38%), Positives = 142/243 (58%), Gaps = 5/243 (2%) Query: 3 EMIYGIHAVQALL--ERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 ++I+G H+ +A L RA R L R + L+ ++ GV+++ + L + Sbjct: 177 DLIWGRHSTEAALVGGRAIHRIWCTSEL--RSTPKFFQLLKDQKASGVLVEEVSWSRLGQ 234 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSADAA 119 ++GAVHQGI+ ++ + +L D + D LL LDG+TDP NLGA +RSA+A Sbjct: 235 LTNGAVHQGIVLQIAASKTLDLKNLIDACKAFGDSSLLLALDGLTDPQNLGAIIRSAEAL 294 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G +I+P+ RSA L + KVA GA E +P+ RV NL R++ L++E +VG A E Sbjct: 295 GAQGLILPQRRSAGLTGSVAKVAAGALEHLPVARVVNLNRSLEKLKDEGYTVVGLAEEGS 354 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 TL + K G L +V+G+E +G+ +TR CD+L+ IP+ G +SLN SVAT I L+E Sbjct: 355 STLSEIKFQGPLVVVVGSEDKGISLITRRLCDQLVRIPLKGVTTSLNASVATSIFLYEVA 414 Query: 240 RQR 242 R + Sbjct: 415 RSK 417 >UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YID5_THEYD Length = 248 Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 84/239 (35%), Positives = 141/239 (58%), Gaps = 4/239 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 IYG++ V + + +E++I K R K L ++ E + + +++ ++++ + G Sbjct: 10 IYGVNPVLESF-KISDALKEIYISKNRISK-LKEILRLAEEKSISVKIVEETFIEKITQG 67 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAGVHA 123 VHQG++A++KP + ++ + ++P F LILD V DP N G+ R ADAAGVHA Sbjct: 68 -VHQGVVAKIKPKKTITLDEALKISFKKNEPAFFLILDLVEDPQNFGSICRIADAAGVHA 126 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I K RS + + K + GA V L+ + N+ ++ L+E NI I G +A + Sbjct: 127 IIYQKKRSVGIVPSVWKASAGAVWHVNLVEINNIKYAIKTLKEHNITIYGAEAQAKDVFW 186 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 +S T L L++G+EG+G+R+ CD++I IPM G+++SLNVSVA+ + FE +RQR Sbjct: 187 ESDFTQPLGLIVGSEGKGIRQTVIALCDKVIKIPMRGTINSLNVSVASALITFEVLRQR 245 >UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes RepID=B0K5F8_THEPX Length = 247 Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 128/205 (62%), Gaps = 1/205 (0%) Query: 39 LIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIA-SLDQPFL 97 +I+ + G+V+ + L E + HQG++A + ++ +DL + ++PFL Sbjct: 39 IINFAKEAGIVVSTTDNDTLSELAGSRNHQGVVALSAVYKYFEVDDLLEYAEQKKEKPFL 98 Query: 98 LILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNL 157 LILD +TDPHNLGA +RSA+A GVH +I+PK R+ +NAT K + GA E + + +V+N+ Sbjct: 99 LILDEITDPHNLGAIIRSAEAFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNI 158 Query: 158 ARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP 217 T+R L+E +WIVGT A+ + + +A V+G EG+G+ +L ++CD ++ IP Sbjct: 159 NNTIRDLKERGLWIVGTDVNAEKSFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVKIP 218 Query: 218 MAGSVSSLNVSVATGICLFEAVRQR 242 M G ++SLN SVA I +++ V +R Sbjct: 219 MKGKINSLNASVAASILIYQVVSKR 243 >UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2I4_ERYRH Length = 236 Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/243 (36%), Positives = 144/243 (59%), Gaps = 9/243 (3%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS I+G + V A L ++ ++ + +++ + ++ L + QG+ +Q ++ LD+ Sbjct: 1 MSNYIFGKNTVTAYL-KSGQKPKNLYLFNKGNYQEIVAL---AKEQGIRVQFVDKFRLDK 56 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 +DG VHQG++ + + Y+ + L ++I +++ D + DPHNLGA LR+ DA G Sbjct: 57 MADG-VHQGVVIEI---QDYKYHSLQEIIKGAKNNLIVLCDQLEDPHNLGAILRTCDACG 112 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V V+V K RS L +T KV+ GA +V + TN+ + + L+E W+V D Sbjct: 113 VDGVVVGKHRSVGLTSTVAKVSTGAINTVKVAEATNMVKAIAELKEAGYWVVAAENAVDA 172 Query: 181 TLY-QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 Y + + L LV+G+EG+G+ RL ++ CD L +IPM GSV+SLNVSVATG+ LF+ V Sbjct: 173 VDYTEFNVDMPLVLVVGSEGKGISRLVKKECDILTTIPMQGSVNSLNVSVATGVLLFDIV 232 Query: 240 RQR 242 R+R Sbjct: 233 RRR 235 >UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0H0_9FIRM Length = 272 Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 85/199 (42%), Positives = 120/199 (60%), Gaps = 2/199 (1%) Query: 46 QGVVIQLANRQYLDE-KSDGAVHQGIIARVKP-GRQYQENDLPDLIASLDQPFLLILDGV 103 G+++ R LD S HQG +A V P E + A + P LL+LDG+ Sbjct: 68 HGIMVDTVGRSKLDALVSQDVRHQGAVAYVAPVAYVAVEEVIAGARARGEDPLLLLLDGI 127 Query: 104 TDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRM 163 DP NLGA LR+ADAAGVH +++P+ S L T +V+ GA E VP+ R+ N+A+T+R Sbjct: 128 EDPQNLGALLRTADAAGVHGILLPRRHSVPLTETVARVSAGALEYVPVARIGNIAQTIRA 187 Query: 164 LQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVS 223 L+E+ WI G + ++ +TG L LV+G+EG GM RLTR+ CD + +PM G ++ Sbjct: 188 LKEQGFWIAGADMGGEEIYDRANLTGALVLVIGSEGRGMSRLTRDLCDFTVRLPMMGKIN 247 Query: 224 SLNVSVATGICLFEAVRQR 242 SLN SVA I ++EA RQR Sbjct: 248 SLNASVAGAILMYEAQRQR 266 >UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes RepID=Q724H1_LISMF Length = 251 Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 93/243 (38%), Positives = 144/243 (59%), Gaps = 7/243 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E I G + V +L R+ ++++ +G + L ++ + + + +Q +Q +++ Sbjct: 8 EWIGGRNPVLEVL-RSDRDIHKIYVQEGSQKGVLKQVLTLAKERKIQVQFVPKQKIEKVV 66 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAAGV 121 GA HQG+ A+V + + +DL + D+ PF +ILD + DPHNLG+ +R+AD+ G Sbjct: 67 SGA-HQGVAAQVAAYQYAELDDLFAAAEAKDEMPFFIILDELEDPHNLGSIMRTADSVGA 125 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT--AGEAD 179 H +I+PK RS L T K + GA E VP++RVTN+ RTM LQ+ +WI GT G +D Sbjct: 126 HGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTNMVRTMEELQKRGLWIFGTDAKGSSD 185 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + M LA+V+G+EG GM L RE CD L+ +PM G V+SLN SVA + L+E Sbjct: 186 YRTMDVDMP--LAIVIGSEGFGMSCLVREKCDFLVHLPMRGKVTSLNASVAASLLLYEVY 243 Query: 240 RQR 242 R+R Sbjct: 244 RKR 246 >UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4B9_NATTJ Length = 247 Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 84/191 (43%), Positives = 119/191 (62%), Gaps = 8/191 (4%) Query: 58 LDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLD----QPF-LLILDGVTDPHNLGAC 112 LD+ HQGI+A +P + Q L ++ D +P LLILD +TDP N GA Sbjct: 59 LDKMVPTTEHQGIVAETEPFKYSQ---LDTVLKGFDYNNQKPLTLLILDHLTDPQNFGAI 115 Query: 113 LRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV 172 +R+ADA GV VI+PK RS +N T K + GAAE VP+I+V+NL +T+ L+E+ IWI+ Sbjct: 116 IRTADAVGVDGVIIPKRRSVDVNPTVMKASSGAAEHVPIIKVSNLRQTISKLKEQWIWIL 175 Query: 173 GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATG 232 GT + D +++ LALV+G E GM L ++ CD + +IPM G V+SLN SVAT Sbjct: 176 GTDIDGDRGIFEENYNIPLALVVGNEASGMSPLVKKECDFIANIPMIGRVNSLNASVATA 235 Query: 233 ICLFEAVRQRS 243 + L+E RQ++ Sbjct: 236 VVLYEIYRQKT 246 >UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase n=7 Tax=Staphylococcaceae RepID=TRMHL_STAEQ Length = 249 Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 92/245 (37%), Positives = 145/245 (59%), Gaps = 13/245 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G HAV+ + + ++ I G + +++ ++ +SQ +++Q + LD ++ Sbjct: 5 VIVGRHAVKEAI-ISGHAINKILIQDGIKKQQINDILKNAKSQKLIVQTVPKSKLDFLAN 63 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQ----PFLLILDGVTDPHNLGACLRSADAA 119 A HQG+ A V P Y+ + + + + ++ILDG+ DPHNLG+ LR+ADA+ Sbjct: 64 -APHQGVAALVAP---YEYANFDEFLQKQKKKARYSTVIILDGLEDPHNLGSILRTADAS 119 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE-- 177 GV AVI+PK RS L T K + GA + VP+IRVTNL++T+ L++ WI GT Sbjct: 120 GVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVTNLSKTIDELKDNGFWIAGTEANNA 179 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 D+ Q+ M+ L +V+G+EG+GM RL + CD I IPM G V+SLN SVA + ++E Sbjct: 180 TDYRDLQADMS--LGIVIGSEGQGMSRLVSDKCDFHIKIPMVGHVNSLNASVAASLMMYE 237 Query: 238 AVRQR 242 R+R Sbjct: 238 VYRKR 242 >UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH n=1 Tax=Paulinella chromatophora RepID=B1X411_PAUCH Length = 526 Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 88/243 (36%), Positives = 144/243 (59%), Gaps = 7/243 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++I+G H+ QA LE + + + + L L+ +++ V+++ + L + Sbjct: 191 DLIWGRHSTQAALESGRPIHRIWCTSEVKSSSKFLQLLKKVKASSVLVEEVSWARLGQLI 250 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASL----DQPFLLILDGVTDPHNLGACLRSADA 118 G+ HQGI ++ + DL LI + P L+ ++G+TDPHNLGA +RSA+A Sbjct: 251 GGSGHQGIALQMAA---VETLDLTKLIEDCCHLGENPLLMAVEGLTDPHNLGAIVRSAEA 307 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G H +I+P+ R+A L + KVA GA E +P+ RV NL R++ +L+++ IVG A E Sbjct: 308 LGAHGLILPQRRNAGLTGSVAKVAAGALEHLPVARVVNLNRSLDILKDKGYRIVGLATEG 367 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 D +L ++ + G L +V G+EG G+ LTR +CD+LI IP+ G+ SLN SVA+ + L+E Sbjct: 368 DVSLTEADLNGPLVIVTGSEGNGLSLLTRRYCDQLIRIPLRGATPSLNASVASALMLYEV 427 Query: 239 VRQ 241 R+ Sbjct: 428 ARR 430 >UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepID=C3RMB5_9MOLU Length = 244 Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 83/243 (34%), Positives = 136/243 (55%), Gaps = 4/243 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M + IYG + + L + + V++ +D +I + + + ++ ++ + Sbjct: 4 MKQYIYGKNTILEAL-KGDKSVYTVYVQNNAKDN---GIIEQCKRKKIPFKIVDKSEFIK 59 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 K HQG++A ++ R Y +++ + I QP LL+LDG+ DPHNLGA LR+ DA G Sbjct: 60 KLGNVSHQGVMAEIEEYRYYSIDEIINTIPDGKQPLLLMLDGLEDPHNLGAILRTCDAIG 119 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V VI+ K+RS LN T KV+ GA + V + +VTNL RT+ L++ + W+VG + Sbjct: 120 VDGVIIGKNRSVGLNGTVAKVSTGAIDHVKVAQVTNLTRTLEDLKKRSFWVVGCDLDKSQ 179 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 Q L +V+G+EG G+ RL ++ CD + +PM G V+SLN SVAT + L++ Sbjct: 180 DYRQVDYNMPLVIVIGSEGFGISRLVKKSCDINVVLPMVGHVNSLNASVATAVILYQVYN 239 Query: 241 QRS 243 R+ Sbjct: 240 SRN 242 >UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Treponema denticola RepID=Q73MR5_TREDE Length = 258 Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 94/259 (36%), Positives = 138/259 (53%), Gaps = 20/259 (7%) Query: 1 MSEMIYGIHAVQALL-------ERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLA 53 M ++I G HA+ +L E+ R + I +E R+ ++ A + I+ Sbjct: 1 MKKIITGFHAIDEILRAEKLKIEKEKNRKPSLEIFYSKEGPRVKKILEAARKLNLKIEKK 60 Query: 54 NRQYLDEKSDGAV-----HQGIIARVKPGRQYQENDLPDLIASLDQP---FLLILDGVTD 105 + Q+LD + H+GI+ + Q + + + A L + F++ILD VTD Sbjct: 61 DNQFLDSLTKTLPEQLRDHRGIVLVTEAENQKKGMSVDEFFAKLAEKGSAFVVILDSVTD 120 Query: 106 PHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQ 165 PHN G+ +RSAD G+ +IVP+++SA KV+ GA VP + VTNL RT+ L+ Sbjct: 121 PHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNLVRTVERLK 180 Query: 166 EENIWIVG--TAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVS 223 +E WI G G+A L K T L+MG EG GM RL E CDE++SIP G + Sbjct: 181 KEGFWIYGADAGGKALPNLTFPKKT---VLIMGNEGRGMSRLVEETCDEIVSIPTKGKLD 237 Query: 224 SLNVSVATGICLFEAVRQR 242 SLNVSVA GI L+E R++ Sbjct: 238 SLNVSVAAGILLYEISRKK 256 >UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ96_HALO1 Length = 267 Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 103/252 (40%), Positives = 143/252 (56%), Gaps = 21/252 (8%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDK-RLLPLIHALESQ----GVVIQLANRQYL 58 ++YG+ V+ LL R +++ R + R + A+ Q GV ++ +R+ L Sbjct: 6 LVYGVGPVEELLGRRAREIAVLYVNPSRRSRQRAGDPVAAVAEQARRRGVSVEELSREQL 65 Query: 59 D-------EKSDGAV--HQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLI-LDGVTDPH 107 D + DG HQG++A V ++ L DLIA+ Q P L + LD VTDPH Sbjct: 66 DALVAGRGDAEDGGRVHHQGVVALVG---AFEYAALEDLIAAPRQRPALFVALDSVTDPH 122 Query: 108 NLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE 167 NLGA +RSA G VI+PKDR+AQ++ KV+ GA E + + +VTNLAR + L++ Sbjct: 123 NLGAIVRSAHVLGADGVILPKDRAAQVSGVVTKVSAGATEQIAIAQVTNLARALEQLKQA 182 Query: 168 NIWIVG-TAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGS-VSSL 225 +WI G AGE +L TG L LV+GAEG G+R L CD LI IPM G+ V SL Sbjct: 183 EVWIAGLAAGEGATSLPAFDATGALCLVLGAEGTGLRPLVARTCDFLIEIPMLGAGVGSL 242 Query: 226 NVSVATGICLFE 237 NVSVA G+ L+E Sbjct: 243 NVSVAAGVALYE 254 >UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P8C0_9FIRM Length = 256 Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 96/249 (38%), Positives = 148/249 (59%), Gaps = 17/249 (6%) Query: 4 MIYGIHAVQALLERAPERFQEVFIL-----KGREDKRLLPLIHALESQGVVIQLANRQYL 58 ++ G +AV LL + P + ++I +G+ R++ L A E++ V ++ + + L Sbjct: 14 LVLGRNAVIELL-KGPREVECIYICDDVPARGQPISRIVAL--AKEAR-VPVKRVDVRRL 69 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASL----DQPFLLILDGVTDPHNLGACLR 114 D ++G HQG+ A+ + + +L A + P L+I D + DPHNLGA +R Sbjct: 70 DTLANGLNHQGVAAQAA---AFHYCTVEELFARAAARGEPPLLVIADSIEDPHNLGAIIR 126 Query: 115 SADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT 174 +A+AAG H +I+PK A L A + + GA E +P+ RVTNL T++ L+ +WI G Sbjct: 127 TAEAAGAHGLIIPKRGGAGLTAIVGRTSAGAVEHLPVARVTNLVSTIKELKARGVWIYG- 185 Query: 175 AGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGIC 234 A + Q+ +TG ALV+G+EG G+ RL RE CD L+S+PM G V+SLN SVA GI Sbjct: 186 ADASGARWDQTDLTGPSALVIGSEGFGLSRLVRETCDALLSLPMRGEVNSLNASVAAGIL 245 Query: 235 LFEAVRQRS 243 ++EAVRQR+ Sbjct: 246 MYEAVRQRT 254 >UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8RFN1_9FIRM Length = 241 Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 84/243 (34%), Positives = 137/243 (56%), Gaps = 4/243 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M++ +YG + V+ALL ++ E+ + G DK L + + + ++ +R+ +D Sbjct: 1 MTQYVYGKNVVKALLADK-KKVYEIILSDGFRDKELE---QEIRKRKIPCKVNSRKKMDT 56 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 G+ HQGI A++ + Y +L + P ++LD + DPHNLGA LR+ D G Sbjct: 57 MFSGSNHQGIAAKIDDYKTYTIEELVAGVPKGKTPLFVMLDELEDPHNLGAILRTCDCVG 116 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V VI+ K R +L T KV+ GA ++V + VTNLA+T++ L++E W+ G + Sbjct: 117 VDGVIIGKHRGVKLTPTVAKVSTGAIDTVKVAVVTNLAQTLKGLKKEGFWVAGADFDNSQ 176 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 Q+ L LV+G+EG G+ L +++CD + +PM GSVSSLN SVA + L++ Sbjct: 177 DYRQASYDMPLVLVVGSEGFGISPLVKKNCDFFVRLPMEGSVSSLNASVACAVLLYQIYA 236 Query: 241 QRS 243 QR+ Sbjct: 237 QRN 239 >UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=B1I0T3_DESAP Length = 251 Score = 156 bits (394), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 90/240 (37%), Positives = 139/240 (57%), Gaps = 7/240 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQG-VVIQLANRQYLDEKS 62 +IYG + V+ L R ++ +++G D RL + L G + +Q+ R LD + Sbjct: 12 VIYGRNPVREAL-RGGRTLHKILVVRG-ADPRLFRELRELARPGRIPVQVVERPLLDRLT 69 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 DG HQG+ A V ++ + + + P +++L+ + DP NLGA LR+A+AAGV Sbjct: 70 DGGAHQGVAATV----SVKDFATVEELLGTENPLIVVLNAIQDPRNLGAILRTAEAAGVD 125 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +VP R+A L A K A GA E +P+ RVTN+A T+R +++ +W+VG + + Sbjct: 126 GAVVPSRRAAPLTPAAAKTAAGAVEYLPVARVTNIALTLREFKQKGLWVVGADPDGPVSY 185 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + + G LALV+G E G+ R R CD L+ IPM+G V SLN SVA + ++EAVRQR Sbjct: 186 WDADLGGPLALVIGGEAGGLGRAVRAECDSLVRIPMSGRVGSLNASVAAALLIYEAVRQR 245 >UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMG3_CRYCD Length = 300 Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 143/259 (55%), Gaps = 23/259 (8%) Query: 1 MSEMIYGIHAV-QALLERAPERFQEVFILKGREDKRLL-PLIHALESQGVVIQLANRQYL 58 M+E I G H V +AL P +F+ G + RLL ++H Q +V++ R L Sbjct: 1 MAEFIEGKHPVWEALSTHVP--ITRIFLADGNKHDRLLQDILHMAARQHIVMETVPRAQL 58 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIA-SLDQP---------------FLLILDG 102 D++S HQGI+A+ +P + L D+IA DQ +++LD Sbjct: 59 DKRSKRGSHQGIMAQAQP---FAYASLDDIIARGNDQAVSLAVSHSSSAAPCALIIVLDH 115 Query: 103 VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMR 162 +TD NLGA RSA++ G +I+P RSA + A+ K + GA +P+ +V NL + + Sbjct: 116 ITDAGNLGAIARSAESVGAAGIIIPNKRSAYVTASTYKSSAGAISHIPVAQVANLQQALA 175 Query: 163 MLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSV 222 L+ E W+ G + +A+ ++ + +TG + LVMG E G+ RLT+E CD +S+P G V Sbjct: 176 RLKNEGYWVAGASEKAEGGIWDANLTGNVCLVMGNENTGLARLTQEACDFFVSLPQRGVV 235 Query: 223 SSLNVSVATGICLFEAVRQ 241 SSLNV+ + +C++E +RQ Sbjct: 236 SSLNVAQSATVCMYEWLRQ 254 >UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=A4XJ85_CALS8 Length = 253 Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 79/242 (32%), Positives = 136/242 (56%), Gaps = 8/242 (3%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I G + V+ L + + EV+I +DK + +I+ + +G+V++ ++ +D+ S Sbjct: 4 IEGKNPVKEALNSSTQ-ITEVYISNTTKDKSISEIINLCKQKGIVVKFVDKSKIDKMSKT 62 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASL----DQPFLLILDGVTDPHNLGACLRSADAAG 120 QG+IA ++Y+ D+ DL+ ++PFL++LD +TDPHN G+ +RSA G Sbjct: 63 KNPQGVIA---IAQEYKYWDIDDLLLEAANKGEKPFLVLLDEITDPHNFGSIIRSAHLCG 119 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 H +I S + T +K + GA E + + RV NL RT+ L+E+ +W+ A+ Sbjct: 120 AHGIITEARNSCPITPTVEKASAGAIEHIKVARVVNLRRTIDSLKEKGVWVYAADNNAEK 179 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +Y + +++G+EG+G+ RL +E D L+ IP G ++S N SVA GI FE ++ Sbjct: 180 FVYDCDFKIPICIIIGSEGKGISRLVKEGADFLVKIPQKGKINSYNASVAAGIIFFEVLK 239 Query: 241 QR 242 QR Sbjct: 240 QR 241 >UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Proteobacteria RepID=B6IRN7_RHOCS Length = 251 Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/246 (36%), Positives = 135/246 (54%), Gaps = 11/246 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVV-IQLANRQYLDEK- 61 +IYG+H V A R + +++ + L L A++ + ++ + +L+++ Sbjct: 10 LIYGLHPVAAAWINPERRCRGLYV----TESALAALDGAVQRAAELGLERPDPTFLEKEE 65 Query: 62 -----SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSA 116 GAVHQG+ P + D+ S Q +++LD VTDPHN+GA +RSA Sbjct: 66 LDKLLPPGAVHQGVALDTAPLPEVAVEDVCIAAESEPQALVIVLDQVTDPHNVGAIMRSA 125 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 A G AVIV + + K A GA ++VPL+RVTNLAR + L++ W VG Sbjct: 126 AAFGARAVIVQDRHAPPVTGVLAKTASGAVDAVPLVRVTNLARALDTLKQAGFWTVGLDE 185 Query: 177 EADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 L++ +TGR ALV+G+EGEG+RRLT E CDE+ +P G V SLNVS A + L+ Sbjct: 186 SGARPLHEVDLTGRTALVLGSEGEGLRRLTGERCDEIARLPTGGPVGSLNVSNAAAVALY 245 Query: 237 EAVRQR 242 E R+R Sbjct: 246 EVARRR 251 >UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NV68_9BACL Length = 271 Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 86/240 (35%), Positives = 137/240 (57%), Gaps = 3/240 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E+I G +A+ ++ E ++ +G E RL + + ++ Q ++ LD Sbjct: 31 KEVIAGRNAILEAIKSGRE-INKILFQEGIEKGRLKSIFAIANEKKIICQEVPKRKLDN- 88 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 S HQG+IA V P ++ +++ + + LLILD + DPHNLGA +R+A+A+GV Sbjct: 89 STTERHQGVIAYVAPYSYFELDEVVNNLEINKDTTLLILDHIEDPHNLGAIIRTAEASGV 148 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA-GEADH 180 A+I+PK R+A ++ TA K + GA E +P+IRV+NL ++ L+E+ WI GT E Sbjct: 149 KAIIIPKRRAAVVSQTAVKASAGAIEHMPVIRVSNLTDAIKKLKEKGFWIAGTTLAERSE 208 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + LA+V+G EGEGM ++ CD L +PM G + SLN SVA GI ++E ++ Sbjct: 209 DYTKIAKDVPLAIVIGNEGEGMSKVVTNECDFLYHLPMLGKIQSLNASVAAGIIMYERIK 268 >UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Ammonifex degensii KC4 RepID=C9RBD1_AMMDK Length = 254 Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 89/242 (36%), Positives = 138/242 (57%), Gaps = 7/242 (2%) Query: 2 SEMIYGIHAV-QALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 +E++YG HAV +ALL A ++ + +G L S+ V +Q+ + LD Sbjct: 8 AELVYGRHAVKEALL--AGRSLYKILVARGLGGAFFHELRSLAASRSVPVQIVPAEALDR 65 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + VHQG +A V P Y L +++A+ LL+L +TDP NLGA LR+A A G Sbjct: 66 LTARGVHQGCVALVSP---YNYASLDEILAT-HPSCLLVLAYITDPRNLGAILRTAAAVG 121 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V VI+P R+A L A A K + G AE V + RVTNLA+T+R L+E+ W++G +A Sbjct: 122 VEGVIIPSRRAAGLTAEALKASAGGAEHVKVARVTNLAQTLRYLKEQGFWVLGAEADAKV 181 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +L++++ L +V+G E G+ ++ R CD L+ IP + LN SVA + L+E +R Sbjct: 182 SLWEAEWNEPLVVVIGGEDTGLGKVVRRECDVLVRIPTTAKMPCLNASVAAAVILYEVLR 241 Query: 241 QR 242 ++ Sbjct: 242 RQ 243 >UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6N6_9BACT Length = 278 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 92/246 (37%), Positives = 135/246 (54%), Gaps = 19/246 (7%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL----- 58 + +G + LER+ E + V++ +G E + E+Q V++LA R L Sbjct: 37 LCWGRNPSLEQLERSGESVERVWLARGVEAE--------FEAQ--VVRLAGRTALERVDR 86 Query: 59 ---DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRS 115 D+ + GAVHQGI ++ + +DL D +A +++LD DPHNLG+ +R+ Sbjct: 87 LALDQMTGGAVHQGIALSLRRPDEVSLDDLLDQLAG-GPALVILLDRCQDPHNLGSVIRT 145 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 A+AAG AV+VPKDRS +L T K + GAA P+I V N+ R + L+E W+VG A Sbjct: 146 AEAAGASAVLVPKDRSVRLTGTVVKASAGAALRFPVISVVNVKRALDDLKEAGFWVVGLA 205 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 GE+ L + R L +GAEG G+ LTR+ CD L IPM+G SLN VA + Sbjct: 206 GESSEPLGKLAWDQRTVLAVGAEGTGLAELTRKSCDFLARIPMSGQAESLNAGVAAALGA 265 Query: 236 FEAVRQ 241 +E R+ Sbjct: 266 YEWARR 271 >UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C951_9FIRM Length = 242 Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 92/244 (37%), Positives = 138/244 (56%), Gaps = 10/244 (4%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E + G +AV+ L +A +++I + D L+ +I +S+G+ IQ N LD S Sbjct: 5 EKVIGRNAVRETL-KAGRNVNKLYISE-NHDSGLVSIIKMAKSKGISIQKTNNHKLDSMS 62 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQ----PFLLILDGVTDPHNLGACLRSADA 118 HQG++A P + L +LI +++ P ++ILD +TDPHN GA +RSA Sbjct: 63 GSTHHQGVLALCSP---VETISLRELIEKMNEKVTKPLVVILDNITDPHNAGAIIRSAYC 119 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AG VI+ RSA + K + GA E + L V+N+A+T+ L++E +++VG Sbjct: 120 AGADGVIMQTRRSASIGEGMYKSSAGAIEHIDLCEVSNIAQTIDTLKKEGLFVVGLDMNG 179 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 ++ Y LALV+GAEG+G+ RL +E CD + SIP+ SLN SVA GI LFEA Sbjct: 180 EN-YYDMDYDMPLALVVGAEGKGLGRLIKEKCDFISSIPLKNDFDSLNASVAAGIVLFEA 238 Query: 239 VRQR 242 V+ R Sbjct: 239 VKTR 242 >UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BF70_9FIRM Length = 239 Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 85/242 (35%), Positives = 139/242 (57%), Gaps = 12/242 (4%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 + + IYG V ++ + ++ F++K + K + +I L V I ++++ D+ Sbjct: 5 LMDKIYGRKPVIDAIDSGVKIYK-AFVIK-QNSKIVEEIIAKLNKANVEINFVDKRFFDK 62 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAA 119 HQG++ ++ DL DL D+ L+ILD + DPHNLGA +RSA++ Sbjct: 63 IELN--HQGVMVE---AESFEYKDLRDL----DKYQRLIILDQIEDPHNLGAIIRSAESF 113 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G VI+P+ RSA ++ K + GA ++ +I V N R + ++E W+ G AGEA Sbjct: 114 GFDGVIIPERRSASVSPIVYKTSAGAINNINIIMVKNTNRAIEEIKEAGFWVYGLAGEAS 173 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + Q + G++ L++G EG+G+ RL RE+CD LI+IPM G V+SLN SVA+ I ++E + Sbjct: 174 SPIDQVDLKGKVCLIVGNEGKGLSRLVRENCDILINIPMKGFVNSLNASVASAIAMYEVL 233 Query: 240 RQ 241 RQ Sbjct: 234 RQ 235 >UniRef50_Q7BKE9 Predicted rRNA methylase n=4 Tax=Bacteria RepID=Q7BKE9_PRB01 Length = 240 Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 82/236 (34%), Positives = 128/236 (54%), Gaps = 8/236 (3%) Query: 7 GIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAV 66 G H+++++LE +P + +++ + RED R+ LI +E + + +N+ + ++ + + Sbjct: 11 GFHSIESILEHSPHKIKKITLPAKREDGRITKLIQKIEENKIPFEFSNK--VKQEPEAYI 68 Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 + K + + ++D P +LILD + DP NLGAC+RSA GV A+I+ Sbjct: 69 SSDLEMNFKDLKLFLDSD------KAQNPLILILDNIIDPRNLGACIRSAAVIGVDAMII 122 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 K A +N+ A KV+ G AE + + VTNL ++ LQ NI I G + A + Sbjct: 123 NKHHCAPINSIAHKVSVGGAEVIKIFHVTNLVNCLKYLQGININIYGLSEHASKSHTDYN 182 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 T A++MGAE G+R T E CD I++ S NVSVATGI L EA RQR Sbjct: 183 FTEASAIIMGAEESGVREKTLERCDHKINLSSNKLFKSFNVSVATGIILSEASRQR 238 >UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomycetaceae RepID=C0W457_9ACTO Length = 330 Score = 149 bits (376), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 102/244 (41%), Positives = 136/244 (55%), Gaps = 6/244 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFI-LKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E++ G +AV A RA VF+ + D RL ++ G + + L+ Sbjct: 83 EIVCGRNAV-AEAARAGVPISRVFMAVSAESDDRLGAVVRRATLIGCPVLETTKLDLEAL 141 Query: 62 SDGAVHQGIIARVKPGRQYQEN-DLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAA 119 +DGAVHQG+ V P Y DL D ++ P L+ LD VTDPHNLGA LRS A Sbjct: 142 TDGAVHQGVAIEV-PAYGYTSALDLLDRARAVGHTPLLVALDQVTDPHNLGAVLRSTGAF 200 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G VI+P+ RS +NAT KV+ GAA VP+ R TNL RT+ L++E ++VG G + Sbjct: 201 GGDGVIIPERRSVGVNATVWKVSAGAAARVPVARETNLVRTLETLKKEGCFVVGLDGGGE 260 Query: 180 HTLYQ-SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + S L LV GAEG G+ RL RE CD + SIP++ +V SLN +VATGI L+E Sbjct: 261 TLMEDLSLADSPLVLVTGAEGAGLSRLVRETCDVIASIPISQTVESLNAAVATGISLYEV 320 Query: 239 VRQR 242 R R Sbjct: 321 DRLR 324 >UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces RepID=C0W229_9ACTO Length = 322 Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/247 (37%), Positives = 140/247 (56%), Gaps = 9/247 (3%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +E+I G +AV ++ + + VF+ D+R+ ++ + G + + L+ Sbjct: 78 NELIVGRNAVFEAVDAGIDIIR-VFLAGNALDERIGKVVRTATALGAPVLEVTKMDLENA 136 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ----PFLLILDGVTDPHNLGACLRSAD 117 S + HQ I V +Y DL+ + P ++ LD VTDPHNLGA LRS Sbjct: 137 SGESAHQSIGIEVP---EYDYCSAQDLLERTKENAQIPLIVALDQVTDPHNLGAVLRSGG 193 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A G+ V++ + RSA +NA A KV+ GAA VP+ R TNL R + L+E ++VG G Sbjct: 194 AFGITGVLISERRSASVNAAAWKVSAGAAARVPVARETNLVRALGELKEAGCFVVGLDGG 253 Query: 178 ADHTLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 D +L + TG L +V GAEG+G+ RL RE CD+++SIP++ +V SLN +VATGI L+ Sbjct: 254 GDVSLRDLDLATGPLVVVTGAEGKGLSRLVRETCDQIVSIPISSAVESLNAAVATGIALY 313 Query: 237 EAVRQRS 243 E +R+ Sbjct: 314 EVASKRA 320 >UniRef50_D1B9Y1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9Y1_THEAS Length = 256 Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 86/239 (35%), Positives = 140/239 (58%), Gaps = 5/239 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +++YG + V +LLE + + V I + R D ++ ++G+ Q + + LD Sbjct: 11 DLVYGRNPVMSLLEGGGDCLK-VLISRRRSDPVRERIVEICRARGIPFQEVDGKVLDRMV 69 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLD--QPF-LLILDGVTDPHNLGACLRSADAA 119 + HQG++ARV P + DL L + D F LL++D V DPHNLGA +R+A+AA Sbjct: 70 GTSSHQGVVARVSPVGILKLEDLYRLAGASDPVAAFALLVVDHVEDPHNLGAMIRTAEAA 129 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE-NIWIVGTAGEA 178 G AV+ P R A K + GAA VPLI V N+++ +R ++E+ +W VG + Sbjct: 130 GFSAVLFPSRREALPTGVVVKASAGAALRVPLIMVGNVSQAIRRVKEDLGLWAVGLEAQG 189 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 +++ ++ R+ALV+G+EG+G+ R+ CD+++ IPM G+ SLNVSVA GI +++ Sbjct: 190 RASVFDERLPPRIALVVGSEGKGLSRVASAACDDILMIPMMGASGSLNVSVAAGIVMYQ 248 >UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIN0_9FIRM Length = 245 Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 84/241 (34%), Positives = 135/241 (56%), Gaps = 6/241 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 MI G V L RA + + + KG K + ++ + V ++ ++ LD+++ Sbjct: 6 MIEGRRPVMEAL-RAGTKITRILLQKGSRGKPVDDILALAKEYSVKVEYLDKAALDKRAT 64 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQ--PFLLILDGVTDPHNLGACLRSADAAGV 121 HQG++A P ++ D++A PFL++LD + DPHNLGA +R+A AAG Sbjct: 65 SRNHQGVMAETPP---FRYTPFADILAKAGDKPPFLVLLDHIQDPHNLGALIRTAYAAGC 121 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +I+P+ R+AQ+ A + A GAAE +P+ +V NLAR + ++ +W+ G + + Sbjct: 122 DGIIIPERRAAQMTPAAVRTAAGAAEYLPVAKVVNLARCLDECKDAGLWVYGADMDGESV 181 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 G LV+G+EGEG+ RL +E CD L+ +PM G V+SLN SVA + ++E RQ Sbjct: 182 YTTGDYQGGTVLVIGSEGEGLGRLVKEKCDHLVQLPMQGKVASLNASVAGALLMYEVYRQ 241 Query: 242 R 242 R Sbjct: 242 R 242 >UniRef50_A7HWP6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HWP6_PARL1 Length = 288 Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 100/247 (40%), Positives = 128/247 (51%), Gaps = 24/247 (9%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD- 63 +YG HAV A L P R E +L + L A + + L R + E D Sbjct: 54 LYGFHAVLAALAN-PARLAERLVLTRNAETEL-----ARQGARLPADLPVRLEIMENEDI 107 Query: 64 ------GAVHQGIIARVKPGRQYQENDLPDLI---ASLDQPFLLILDGVTDPHNLGACLR 114 GAVHQGI R P LPDL A +++LD VTDPHN GA LR Sbjct: 108 AALLPAGAVHQGIALRASP--------LPDLDVVEACEGTNRVVVLDQVTDPHNFGAILR 159 Query: 115 SADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT 174 SA G A+I + S L K A GA E V + R+TNL R + L+E +VG Sbjct: 160 SAAVFGAGALITTERNSPSLGGVLAKAASGALELVRVARITNLVRAIEELKELGFEVVGL 219 Query: 175 AGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGIC 234 GE + +L K++ R+ALV+GAEG G+RRLTREHCD L +P AG + SLNVS A + Sbjct: 220 DGEGEASLPDLKLSPRVALVLGAEGAGLRRLTREHCDLLARLPAAGGMKSLNVSNAAAVA 279 Query: 235 LFEAVRQ 241 L+E R+ Sbjct: 280 LYELFRR 286 >UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Dictyoglomus RepID=B5YF75_DICT6 Length = 241 Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 145/242 (59%), Gaps = 13/242 (5%) Query: 1 MSEMIYGIHAV-QALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYL 58 M + IYG +AV +AL P +++I KG D + +++ + +GV I+ R + Sbjct: 1 MEDKIYGKNAVLEALKSNIP--LNKIYIAKGIHFDNKFNEILNLAKEKGVPIKYVERSVI 58 Query: 59 DEKSDGAVHQGIIARVK--PGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRS 115 EK G QG++A + P R+++ D+ +L+ + +++LD + DPHNLGA R+ Sbjct: 59 -EKMVGGNSQGVLAIISSVPYREWE-----DIEKTLNNKSVIVVLDHIQDPHNLGAIART 112 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 ++ AG A+++PK RSA + + + K + GA +P++RV+N+A +R L+++ +IVG Sbjct: 113 SEFAGASAIVIPKARSAGVTSASFKASAGALSYIPVVRVSNIANFLRELKKKGWFIVGAD 172 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + ++ Q LALV+G+E EG+ R+ +E CD L+ IP G V SLNVSVA GI L Sbjct: 173 LDTENLYNQVNYRFPLALVVGSEDEGLHRIVKESCDLLVKIPSYGKVESLNVSVALGIIL 232 Query: 236 FE 237 ++ Sbjct: 233 YK 234 >UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Actinobacteridae RepID=D2RCJ3_GARVA Length = 331 Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 86/229 (37%), Positives = 127/229 (55%), Gaps = 22/229 (9%) Query: 33 DKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASL 92 D R ++ QG+ + A+R +D + HQGII +V+P YQ + L +L+ Sbjct: 98 DDRTREIVKLAGMQGLRLLEADRLEMDRIAHSTNHQGIIVKVQP---YQYHSLQELVERA 154 Query: 93 DQ------------------PFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQL 134 ++ P + LDGVTDP NLGA +RSA A G + VI+P+ RSA + Sbjct: 155 EKKARAMEAADSDSARINARPLFIALDGVTDPQNLGAVIRSAAAFGANGVILPERRSASV 214 Query: 135 NATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKM-TGRLAL 193 A A KV+ GAA +P+ RV NL + ++ L+E + +G G D + ++ T L + Sbjct: 215 TAAAWKVSAGAAAHLPVARVVNLNKAIQGLRERGWYAIGLDGGGDKLVGETGFETDPLVV 274 Query: 194 VMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 V+G+EG+GM RLTRE CD + IP++ +V SLN SVA GI L+ R Sbjct: 275 VLGSEGKGMSRLTREACDAIAGIPISSAVESLNASVAAGISLYAVANAR 323 >UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacterium RepID=Q7P601_FUSNV Length = 234 Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 80/227 (35%), Positives = 122/227 (53%), Gaps = 31/227 (13%) Query: 9 HAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQ 68 VQ L + A +R ++F + D SQGV + ++N Y + + Sbjct: 33 ETVQKLKDLASKRNIKIFYTGKKID----------NSQGVAVYISNYDYYKDFDEA---- 78 Query: 69 GIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPK 128 Y+E +A D+ +LILD + DP N GA +RSA+ V +I+P+ Sbjct: 79 -----------YEE------LAEKDKSLVLILDEIQDPRNFGAIIRSAEVFKVDLIIIPE 121 Query: 129 DRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMT 188 S ++N T K + GA E V + +VTNL+ T+ L++ + W+ G AGEA + + Sbjct: 122 RNSVRINETVVKTSTGAIEYVNISKVTNLSDTINKLKKLDYWVYGAAGEASINYNEENYS 181 Query: 189 GRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 ++ LV+G EG G+R+ REHCD+LI IPM G ++SLNVSVA+GI L Sbjct: 182 NKIILVLGNEGSGIRKKVREHCDKLIKIPMYGQINSLNVSVASGILL 228 >UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Bifidobacterium longum RepID=B7GPD2_BIFLI Length = 333 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 91/253 (35%), Positives = 138/253 (54%), Gaps = 20/253 (7%) Query: 2 SEMIYGIHAV-QALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLD 59 S+++YG ++V +AL P ++I+ E D R ++ G+ + A+R +D Sbjct: 71 SDLVYGRNSVLEALRVGVPS--STLYIMSRIEHDDRTREIVKIAGMNGLHMLEADRLEMD 128 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPD---------------LIASLDQPFLLILDGVT 104 + HQG+I +V P + N+L D +P + LDGVT Sbjct: 129 RIARSGNHQGVILKVDPFQYSSLNELADRAEKKAKAMEAANSAAARIAARPLFIALDGVT 188 Query: 105 DPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRML 164 DP NLGA +RSA A G + VI+P+ RSA +NA A KV+ GAA +P+ RV NL + + L Sbjct: 189 DPQNLGAVIRSAAAFGANGVILPERRSASVNAAAWKVSAGAAAHMPVARVVNLTKALEGL 248 Query: 165 QEENIWIVGTAGEADHTLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVS 223 +E ++VG G D + ++ + L +V+G+EG G+ RL RE CD + IP++ SV Sbjct: 249 KERGYYVVGLDGGGDKLVGETGFESDPLVVVLGSEGSGLGRLVRETCDAIAGIPISSSVE 308 Query: 224 SLNVSVATGICLF 236 SLN SVA GI L+ Sbjct: 309 SLNASVAAGISLY 321 >UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ92_DESPS Length = 295 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 85/250 (34%), Positives = 136/250 (54%), Gaps = 16/250 (6%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++I+GIH + L+ P R E+ K R + ++ + V + + L + Sbjct: 47 DLIWGIHPIVEALKYEPNRISEIIAQKDRRGAKFDEIVELARAAKVKVTFIDSISL--QG 104 Query: 63 DGAV---HQGIIARVKPGRQYQENDLPDLIASL-------DQPFLLILDGVTDPHNLGAC 112 DGA HQG+IA+V Q D D + ++P +++ D + DPHNLGA Sbjct: 105 DGAASARHQGVIAKVT---QADLMDFADFLQKFKDAVDRGEKPRIIVCDSLQDPHNLGAI 161 Query: 113 LRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV 172 +RSA A+G V++ ++RSA L TA K + GA + + +VTNL +++ L++ W+ Sbjct: 162 VRSALASGAIGVLLTRERSAPLGGTAAKSSAGAISHMDICQVTNLVKSLAELKKVGAWVF 221 Query: 173 GTAGEADH-TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVAT 231 G +AD +L+ + + +V+G+EG G+R L R CD +SIPM G + SLN SVA Sbjct: 222 GAIKDADAVSLFDADLNVPACIVVGSEGTGIRPLVRRECDIQLSIPMVGELDSLNSSVAA 281 Query: 232 GICLFEAVRQ 241 + LFEA+RQ Sbjct: 282 AVILFEAMRQ 291 >UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacterium RepID=B8DUY4_BIFA0 Length = 331 Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 83/229 (36%), Positives = 125/229 (54%), Gaps = 22/229 (9%) Query: 33 DKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASL 92 D R ++ G+ + A+R +D + HQG+I + P +Q + L +L+ Sbjct: 98 DDRTREIVRLAGQHGLNLLEADRLEMDRIARSGNHQGVILKADP---FQYSSLHELVERA 154 Query: 93 DQ------------------PFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQL 134 ++ P + LDG+TDP NLGA +RSA A GV+ VI+P+ RSA + Sbjct: 155 ERKARAMEMADSKASRLSARPLFIALDGITDPQNLGAVIRSAAAFGVNGVILPERRSASV 214 Query: 135 NATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKM-TGRLAL 193 NA A KV+ GAA +P+ RV NL + + L+E + +G G + ++ T L + Sbjct: 215 NAAAWKVSAGAAAHMPIARVVNLTKAIEALKERGYYSIGLDGGGSKLVGETGFETDPLVV 274 Query: 194 VMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 V+G+EG+G+ RLTRE CD + SIP+ +V SLN SVA GI L+ V R Sbjct: 275 VLGSEGKGLSRLTREACDAIASIPITSAVESLNASVAAGIALYATVNAR 323 >UniRef50_A1KPR5 Uncharacterized tRNA/rRNA methyltransferase BCG_3644c n=102 Tax=Actinobacteridae RepID=Y3644_MYCBP Length = 322 Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 89/237 (37%), Positives = 131/237 (55%), Gaps = 6/237 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDE 60 +E + G + V L RA +++ G E D+RL + G+ I R LD Sbjct: 67 TETVLGRNPVLECL-RAGVPATALYVALGTEADERLTECVARAADSGIAIVELLRADLDR 125 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP--FLLILDGVTDPHNLGACLRSADA 118 + +HQGI +V P +DL L A+LDQP L+ LD ++DP NLGA +RS A Sbjct: 126 MTANHLHQGIALQVPPYNYAHPDDL--LAAALDQPPALLVALDNLSDPRNLGAIVRSVAA 183 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G H V++P+ RSA + A A + + GAA +P+ R TNL RT++ + + ++G Sbjct: 184 FGGHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLKGWADRGVRVIGLDAGG 243 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 L T L +V+G+EG+G+ RL R++CDE++SIPMA SLN SVA G+ L Sbjct: 244 GTALDDVDGTDSLVVVVGSEGKGLSRLVRQNCDEVVSIPMAAQAESLNASVAAGVVL 300 >UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZ75_9SPHI Length = 259 Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 88/247 (35%), Positives = 137/247 (55%), Gaps = 13/247 (5%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLI-----HALESQGVVIQLANRQ 56 ++M++GI AV ++ E + +F+ +G L L H + Q V I+ NR Sbjct: 16 NQMVFGIRAVIEAIDSGKE-IESLFVQRGLGGSLFLELKALIKEHEIGFQQVPIEKLNR- 73 Query: 57 YLDEKSDGAVHQGIIARVKP-GRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRS 115 + K+ HQG+IA + P Q E+ +P++ + P +L+LDGVTD NLGA R+ Sbjct: 74 -ITRKN----HQGVIAVISPITYQKIEDLIPEIYEKGETPLILMLDGVTDVRNLGAIART 128 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 A+ +GVHA+IVPK SA++N A K + GA +P+ R NL + + L + I +V + Sbjct: 129 AECSGVHAIIVPKKGSAEINPDAIKTSAGALYKIPVCRHDNLGKVGKFLIDSGIQLVVST 188 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + + ++Y T ++MGAE G+ D L IPM G + SLNVSV+ G+ L Sbjct: 189 EKTEESIYSVDYTAPTCIIMGAEDVGVSDDLIRISDHLAKIPMFGEIGSLNVSVSAGVVL 248 Query: 236 FEAVRQR 242 +EA+RQR Sbjct: 249 YEAIRQR 255 >UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Coriobacteriaceae RepID=C8W818_ATOPD Length = 338 Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 84/243 (34%), Positives = 133/243 (54%), Gaps = 6/243 (2%) Query: 2 SEMIYGIHAV-QALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 +++I G AV +AL P + V G++D+ + L LE +G+ ++ R LD Sbjct: 95 TDLIEGRRAVAEALTVGIPLKNALVQAASGQKDQEIEALARQLEQEGIPVERVARPVLDS 154 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLI--ASLDQPFLLILDGVTDPHNLGACLRSADA 118 S HQG+I R +P + DL ++I A +++LD VTD N GA +RSA+ Sbjct: 155 LSSHGAHQGVIVRTQP---FAYADLSEIIQRAGSANALVVVLDHVTDEGNFGAIVRSAEV 211 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G V++ R+A++ A K + GA +P+ +V+NL R + L+ W G+ A Sbjct: 212 VGAAGVVIANARAARVGVGAYKTSAGAVLHLPIAQVSNLPRALEELKAAGFWTCGSTEHA 271 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 +++++ M GRLALVMG+EG G+ RL E CD +P G V SLNV+ AT + +E Sbjct: 272 TQSVWEAPMGGRLALVMGSEGSGISRLMLEKCDFTCKLPQFGQVESLNVAQATTVMCYEW 331 Query: 239 VRQ 241 +R+ Sbjct: 332 LRR 334 >UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Tax=Actinobacteria (class) RepID=A9WLY5_RENSM Length = 336 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/225 (36%), Positives = 128/225 (56%), Gaps = 20/225 (8%) Query: 33 DKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLI--- 89 D R+ ++ +G+ + ++ LD +D AVHQG+ ++ P D PD I Sbjct: 107 DDRVKEVLKLASERGIPLMETHKPELDRMTDDAVHQGLALQIPP------YDYPDAIDIA 160 Query: 90 -ASLDQ---------PFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAK 139 ++D+ P ++ LDG+TDP NLGA +RS A AVIVP+ RS L A+A Sbjct: 161 QETVDKFKKGYIKNSPLIVALDGITDPRNLGAIIRSVSAFAGQAVIVPERRSVGLTASAW 220 Query: 140 KVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGR-LALVMGAE 198 K + GAA VP+ R NL R + + +++G G+ D +L + + +V+G+E Sbjct: 221 KTSAGAAVRVPVARAGNLNRALESFKGMGYFVLGLDGDGDVSLPALAVAKEPVCIVVGSE 280 Query: 199 GEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 G+G+ RL RE+CD+++SIP+ ++ SLN S+A GI L+E RQRS Sbjct: 281 GKGLSRLVRENCDQIVSIPIDSAMESLNASMAVGITLYEIARQRS 325 >UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Fusobacteriaceae RepID=D1AP92_SEBTE Length = 234 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/241 (32%), Positives = 134/241 (55%), Gaps = 9/241 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E I G++AV+ L+ + +++ I KG R+ ++ + + I Y D++ Sbjct: 2 EKIIGLNAVREALD-GSKNIEKIEIYKGTNKDRIRDILSKASKKNIKIF-----YTDKRQ 55 Query: 63 DGAVHQGIIARVKPGRQYQE-NDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + + QGI A V Y E N+ + + + + +L+LD + DP N GA +RSA+ GV Sbjct: 56 ENS--QGIAALVSEYDYYLELNEFLEKVLAKQRSIVLVLDQIQDPRNFGAIIRSAECFGV 113 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +I+ S + T K + GA E V +I+VTN++ +M L++ +I G + + Sbjct: 114 DGIIIQDRNSVSVTETVVKSSTGAIEHVDIIKVTNVSDSMDKLKKYGYFIYGAEADGETE 173 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 Y +L LV+G+EG+GMR+ +EHCD++++IPM G ++SLNVSVA GI L E + Sbjct: 174 YYNEPFPEKLCLVLGSEGKGMRKKVKEHCDKILNIPMHGKINSLNVSVANGILLAEISKN 233 Query: 242 R 242 + Sbjct: 234 K 234 >UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococcus marinus RepID=Q7TU91_PROMP Length = 428 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 88/239 (36%), Positives = 131/239 (54%), Gaps = 11/239 (4%) Query: 3 EMIYGIHAVQALL--ERAPERF---QEVFILKGREDKRLLPLIHALESQGVVIQLANRQY 57 + I+G H+V A L ER R E+F ++ L+ L+S+GV+I+ Sbjct: 189 DWIWGKHSVFAALNSERPINRIWCTSEIF-----SSEKFYLLLKDLKSKGVLIEEVPWSR 243 Query: 58 LDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRSA 116 L + + GAVHQG+ + L D+ S P ++ LDGVTDPHN GA +RSA Sbjct: 244 LSQLTSGAVHQGVALQHASTESISLEKLIDISKSKSSNPIIVALDGVTDPHNFGAIIRSA 303 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 +A +IVP+ RSA L T KVA GA E +P+ RV NL R + L+++ I+G +G Sbjct: 304 EAFDCKGIIVPQRRSAGLTGTVAKVAAGALEHIPVSRVVNLNRAIDELKKKGFIIIGLSG 363 Query: 177 EADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + + + K + +++GAE +G+ L ++ CD L+ IP+ G SSLN SVA I L Sbjct: 364 DGQVPISEFKEKAPVVVIVGAENKGISLLVQKKCDYLLKIPLKGKTSSLNASVAAAISL 422 >UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Thermotogaceae RepID=A7HLT3_FERNB Length = 234 Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 122/209 (58%), Gaps = 7/209 (3%) Query: 33 DKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASL 92 DK L LI ++ + + +A + L + +QG++ + + E+ LP+ Sbjct: 29 DKELDKLIEQVKERKLPYTIAPKNVLKKLCGEEKNQGVVIDIGDFQYADESYLPE----- 83 Query: 93 DQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLI 152 PF+++LD V DP NLGA +R+A AAGV+ V++ KD SA + + K + G +P++ Sbjct: 84 -NPFIVLLDQVQDPQNLGAIVRTAVAAGVNMVVLTKDNSAHVTPGSIKASAGTIFRIPIV 142 Query: 153 RVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDE 212 NLAR + L+++ +WI G A L++ K+ L +V G EG G+R+L +E CDE Sbjct: 143 ITVNLARYIEKLKDKGVWIYG-ADMRGKPLWEVKLERPLGIVFGNEGSGIRQLVKESCDE 201 Query: 213 LISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L+SIPM + SLNVSV+ GI ++E +R+ Sbjct: 202 LVSIPMKTPIDSLNVSVSAGILIYEVLRR 230 >UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD69_THET1 Length = 264 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 81/243 (33%), Positives = 132/243 (54%), Gaps = 7/243 (2%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQ-GVVIQLANRQYLDEKSD 63 IYG +AV+ L + + + + L I +L ++ G+ I+ R LD + Sbjct: 23 IYGRNAVRECLLAGRRKVYRLLVAYSHSASQTLEAIESLAARSGLQIERVERSILDRLTH 82 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIAS--LDQPFLLILDGVTDPHNLGACLRSADAAGV 121 GA HQG++ ++ + + DL+AS L +L+LD + DP N G LR+A+ G+ Sbjct: 83 GANHQGVVIEAS---EFSYSSIEDLLASGELRGKDILMLDSLQDPQNFGTLLRTAEVFGI 139 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVG-TAGEADH 180 AVI+P+ RS ++ + GA E + + +VTNLART L+E W++G E+ Sbjct: 140 GAVIIPEHRSVEVTPAVVNASSGATEHLNISKVTNLARTASKLKEYGYWVLGLEYDESSS 199 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++ + + LV+G+EG G+R L R+ CD L+ IP AG + SLN +VA I L+E + Sbjct: 200 VIWDVDLRIPICLVVGSEGSGIRELVRKRCDLLVKIPQAGRIGSLNAAVAGSIALYEIYK 259 Query: 241 QRS 243 +S Sbjct: 260 SKS 262 >UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Caulobacteraceae RepID=C5SHP3_9CAUL Length = 322 Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 92/255 (36%), Positives = 127/255 (49%), Gaps = 32/255 (12%) Query: 5 IYGIHAVQALLER-----------APERFQEVFILKGREDKRLLPLIHALESQGVVIQLA 53 I+G+HAV+A L+ P+R + + + + + L E G + Q Sbjct: 76 IWGLHAVEAALKNQSRLGPIRLYVTPDRQKALEQVAPKRGDLHVRLTEMAEFSGFLPQ-- 133 Query: 54 NRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACL 113 GAVHQG+ P N L + ++P L++LD VTDP N+GA L Sbjct: 134 ----------GAVHQGVALNGPPLEGDDLNGLMEGALRQERPVLVMLDQVTDPQNIGAIL 183 Query: 114 RSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVG 173 R+ A G +I+ S + K A GA + VP RVTNL+R + L E +G Sbjct: 184 RTCAAFGAAGLIMQDRHSPVMQGVLAKTAAGAMDRVPFARVTNLSRALESLTENGFVSLG 243 Query: 174 TAGEADHTLY---------QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSS 224 AGEA+H+L Q+ L +VMG+EGEG+RRL EHCD L+ IPM G S Sbjct: 244 MAGEAEHSLQAVLEQQGWRQAGSPRALVIVMGSEGEGLRRLVAEHCDHLVKIPMPGGFES 303 Query: 225 LNVSVATGICLFEAV 239 LNVS AT I L+EA+ Sbjct: 304 LNVSHATSIALYEAL 318 >UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBE6_ELUMP Length = 249 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 131/237 (55%), Gaps = 3/237 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKR-LLPLIHALESQGVVIQLANRQYLDEK 61 ++++G+HAV +++ R ++++L + R + I A + + I + + +D Sbjct: 6 DIVFGVHAVTEVIKNRKRRVIQLYVLDNKAGHRGIEDAIKAAKRNNIKIDRMDVKTMDAL 65 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + HQGI ARV+P + + D D+ + + +D +TDP NLG+ +RSA G Sbjct: 66 TKKGNHQGIAARVEPVKIMRLIDAIDVSRGNKKDLWIAVDEMTDPQNLGSIIRSAACLGF 125 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +I+P R+ L + KVA GA E V ++ V NLA + L++E WI G A + Sbjct: 126 STIILPSRRTVGLTPSVYKVASGATEKVTVVEVANLATALLDLKDEGFWIYG-ADMGGQS 184 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMA-GSVSSLNVSVATGICLFE 237 + ++ + LV+G+EG G+R T EHCD+++SIP A GSV SLN + A I +F+ Sbjct: 185 IVKTDYSFPAVLVVGSEGTGIREKTAEHCDQVVSIPQAPGSVDSLNAANAASIIMFD 241 >UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi (class) RepID=A5UYW3_ROSS1 Length = 252 Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 91/250 (36%), Positives = 137/250 (54%), Gaps = 13/250 (5%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLD 59 M +++YG +AV+ L FQ + + G +E L ++ GV ++ +R+ LD Sbjct: 1 MPDLLYGRNAVREALRARRRTFQRLLVSAGAQETGTLGDIVRIAGEVGVPVERIDRRELD 60 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ----PFLLILDGVTDPHNLGACLRS 115 + A HQG+ Y DL D +A ++ FLL+LD + DP N+G LR+ Sbjct: 61 RRLRDANHQGVALECS---DYPYVDLNDCLALAEERGEPAFLLLLDHIQDPQNVGTLLRT 117 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 A+ GVH V++P R+A++ + GA E + + VTNLA T+ +Q +W+VG Sbjct: 118 AEVVGVHGVVIPGRRAAEVTPAVVNTSSGAVEHLRVAVVTNLAATIEQIQHAGVWVVGV- 176 Query: 176 GEADHTLYQS---KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATG 232 E D Y+ + LALV+GAEG G+ RLTRE CD L+ +PM G ++SLNV+VA Sbjct: 177 -EDDERAYEYDRVDLDLPLALVLGAEGPGLARLTRERCDFLVRLPMRGQIASLNVAVAGS 235 Query: 233 ICLFEAVRQR 242 I L+ A R R Sbjct: 236 IVLYHAWRVR 245 >UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12 Tax=Chlorobiaceae RepID=B3QM30_CHLP8 Length = 257 Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 83/242 (34%), Positives = 135/242 (55%), Gaps = 5/242 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +++YG +AV LL+ PE +++++ +L ++ + A + L S Sbjct: 17 QVVYGRNAVIELLQSKPESVEKIYLQFNTSHPKLKEIVITARRLKIPCGKARMEKLTLIS 76 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASL--DQPFLLILDGVTDPHNLGACLRSADAAG 120 A +QG+ A + Y L +++A+ P L+IL G+ DPHN+GA +R+A+A Sbjct: 77 GTAKNQGVCALLTSVTFYT---LDEVLAAPRNSSPLLVILQGLEDPHNVGAIIRTAEAVA 133 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +VI+ + + A ++AT K + GA + + +V +L +T+ +L E IV EA+H Sbjct: 134 ADSVIMIEGKGAPISATVHKASAGALSHMRVCKVKSLVKTLDLLHERGFSIVAADMEAEH 193 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 LVMGAEG+G+ TR+ CD+++ IPMAG V SLNVSVA G+ L+EA+R Sbjct: 194 NHTDIDWKRPTVLVMGAEGKGLGSETRKRCDQIVRIPMAGCVESLNVSVAAGVMLYEAMR 253 Query: 241 QR 242 QR Sbjct: 254 QR 255 >UniRef50_A8LF93 RNA methyltransferase, TrmH family, group 3 n=16 Tax=Bacteria RepID=A8LF93_FRASN Length = 386 Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 90/237 (37%), Positives = 129/237 (54%), Gaps = 3/237 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDEK 61 E++ G +AV L RA ++I G + D+R+ G+ + R LD Sbjct: 140 ELVVGRNAVVEAL-RAGVPATTLYIAGGLDFDERIADARRLAGRAGLAVVDIGRFELDRL 198 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 A HQG+ V P +D+ + ++ LDGVTDP NLGA +RSA A G Sbjct: 199 CGTAPHQGLALSVPPFEYAHPDDVLAAAQAAAPGLVVALDGVTDPRNLGAVVRSAAAFGA 258 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 V+VP+ R+A + A A K + GAA +P+ R NL RT+R E +++VG A + + + Sbjct: 259 SGVVVPERRAAGVTAAAWKTSAGAAARLPVARAVNLTRTLRSFAESGLFVVGLAADGEVS 318 Query: 182 LYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 L + ++ T L LV+G+EG+G+ RL E CD + IPMAG V SLN VATGI L E Sbjct: 319 LDELQVATDPLVLVIGSEGKGLSRLVGECCDLRVRIPMAGQVESLNAGVATGIALSE 375 >UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYT1_UNCTG Length = 251 Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 136/239 (56%), Gaps = 3/239 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G + V LL+ A ++ + + + +I+ + +G+ + + LD+ S+ Sbjct: 13 VVCGRNPVLELLKAARRTVNKIMVSRTARGVVISEIINLAKQKGIALHSVPPEKLDKFSE 72 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 + QGI+A V P + + +DL + +P L+ILDG+ DPHNLGA +R+ A G Sbjct: 73 SS--QGIVAEVSPVQYTELSDLIERSKKSLKPLLVILDGLEDPHNLGAIIRNCVAFGADG 130 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VI+PK R+A +N T K + GA E + + RV N + + +L+E + WIVG A L Sbjct: 131 VIIPKWRAAGVNETVSKSSAGAVEHISISRVENTNQAIGLLKENSFWIVG-AENGGRILE 189 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + LA+++G+EG G+ LT+++ D LISIP +SSLN S A+ + L+E ++R Sbjct: 190 KIDLPFPLAVIIGSEGFGLHSLTKKNSDFLISIPQENIISSLNASCASAVILYEIAKKR 248 >UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BGA8_9BACT Length = 244 Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 86/242 (35%), Positives = 124/242 (51%), Gaps = 9/242 (3%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I+GI A+ +E + V++LKG + K L+H L ++ + + LD S Sbjct: 7 IFGIRAILEAIESG-KSLDRVWLLKGTQSKLFEQLLHVLRNKNIAFSFVPVERLDRFSSK 65 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASL----DQPFLLILDGVTDPHNLGACLRSADAAG 120 HQG +AR+ D+ LI S+ + P ++LDGVTD N GA LRSA A G Sbjct: 66 N-HQGAVARIG---ALSTQDMEPLIESVLKEKENPVFVLLDGVTDTRNFGAILRSAAATG 121 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V AV + SA LN K + G A VP+ +V +L + L+ +I +G ++ Sbjct: 122 VDAVFISSTGSAPLNGDVVKTSAGGAFKVPISKVQHLKDVVYYLKAHDIPTLGITEKSTE 181 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 TLY S + G LALV GAE G+ + D +PM +V SLNVSVA + +E +R Sbjct: 182 TLYDSDLKGPLALVFGAEDVGISNGLLKILDHKAKLPMTEAVDSLNVSVACAVVFYETIR 241 Query: 241 QR 242 QR Sbjct: 242 QR 243 >UniRef50_D2LHP2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LHP2_RHOVA Length = 310 Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 91/236 (38%), Positives = 127/236 (53%), Gaps = 9/236 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE-K 61 E +YG+H+V+A L R + ++ + RL PL L+++ + LA LD Sbjct: 70 ETLYGLHSVEAALANPKRRIRHAWLTENAA-ARLAPL---LDARKIAATLALPADLDALT 125 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAG 120 GAVHQG + +V+P Q +D D + D P ++ILD VTDPHN+GA LRSA A G Sbjct: 126 GPGAVHQGAVLQVEPLAQPGLDDFLDALG--DAPATVVILDQVTDPHNVGAVLRSAAAFG 183 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 + A+IV S L A K A G E VP+I V NLAR + L+E + +G E Sbjct: 184 IGALIVQDRHSPPLTAALAKSASGGLEHVPVIEVVNLARVLEKLKERDFLCIGFDSEGAQ 243 Query: 181 TLYQSKMTG-RLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + G R+A V GAE +G+RRL RE CD + ++ G + SLN+S A I Sbjct: 244 RFDAALAGGRRVAFVFGAEDKGLRRLVREGCDAIAALSAPGPIKSLNISNAAAIVF 299 >UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale str. Israel RepID=D1AU26_ANACI Length = 262 Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 73/181 (40%), Positives = 110/181 (60%), Gaps = 4/181 (2%) Query: 65 AVHQGIIARVKP--GRQYQENDLPDLIA--SLDQPFLLILDGVTDPHNLGACLRSADAAG 120 VHQGI RV GR + + D+++ + +++LD VTD +N+GA +RSA Sbjct: 74 TVHQGIALRVGKLFGRDGDKLRVEDIVSGSAFTASTVVLLDQVTDINNVGAIVRSAACFD 133 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V AVI+P+ S N +V+ GAA+ VP++RV NL +TM L++ W G + D Sbjct: 134 VDAVILPEHHSPSENCIITRVSSGAADLVPVVRVGNLVKTMEYLKQNGYWCYGMDVDGDK 193 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 L++ R A+++G+EG+G+RRLTREHCD L+ IPM+ ++SLNVS A I L+ + Sbjct: 194 ALHEISFCERRAIILGSEGKGIRRLTREHCDHLVKIPMSARINSLNVSNAAAIVLYSSYL 253 Query: 241 Q 241 Q Sbjct: 254 Q 254 >UniRef50_Q2RQU5 RNA methyltransferase TrmH, group 3 n=3 Tax=Rhodospirillaceae RepID=Q2RQU5_RHORT Length = 348 Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 87/236 (36%), Positives = 126/236 (53%), Gaps = 14/236 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK-S 62 ++G HAV+A L+ PER K L L G ++ A+R+ ++ Sbjct: 117 WLFGRHAVEAALQN-PER-------KALRLLALAGAAEGLPKGGPTVEPADREAIEAVVP 168 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLL-ILDGVTDPHNLGACLRSADAAGV 121 GAVHQG+ +V P Q + IA + P ++ ILD V+DPHN+GA LRSA A G+ Sbjct: 169 PGAVHQGLALKVAPLSQPTVEE----IARIPGPSVVAILDQVSDPHNIGAVLRSAAAFGI 224 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AV+V S + T K A G E VPL+R NL++ + +E W G A+ T Sbjct: 225 RAVVVQDRHSPEETGTLAKSASGTLERVPLVRAINLSQALDTFKEHGFWCAGLDASAETT 284 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 L ++ + R +V+G+EG G+RRL R+HCD L+ + M V SLNVS A + +E Sbjct: 285 LAEAALPERCVVVLGSEGAGLRRLVRDHCDLLVKLAMDSGVESLNVSNAAAVTFYE 340 >UniRef50_Q5GSE7 RRNA methylases n=12 Tax=Rickettsiales RepID=Q5GSE7_WOLTR Length = 258 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 79/235 (33%), Positives = 127/235 (54%), Gaps = 5/235 (2%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK-SD 63 +YG H L+ E+ + + + + ++S+G+ +QL + L E S Sbjct: 12 LYGKHTCMLALKNKNRLCIELLVTENSYREYEKEIRQCVDSKGIKVQLVKNKILSEVLSK 71 Query: 64 GAVHQGIIARVKPG-RQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 A HQGI +V P ++ + +S D ++ILD VTD HN+G+ LR++ V Sbjct: 72 SANHQGIALKVAPILHSLSIKEIAE--SSSDSSTIVILDQVTDTHNIGSILRTSACFNVD 129 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+++P + S NA+ K A G + VPLI VTN+ +TM L++ W G A + Sbjct: 130 ALVLPYNHSPSENASIAKAASGTLDIVPLIHVTNVVKTMEYLKKVGYWCYGFDSNAKENI 189 Query: 183 YQSKMTG-RLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + K G ++ ++ G+EG+GMRRL +E+CD L+ IPM+ + SLNVS A I L+ Sbjct: 190 DEIKSFGKKIVIIFGSEGKGMRRLVKENCDYLLKIPMSNVIDSLNVSNAAAIGLY 244 >UniRef50_A8F2F0 tRNA/rRNA methyltransferase n=16 Tax=cellular organisms RepID=A8F2F0_RICM5 Length = 256 Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 68/183 (37%), Positives = 105/183 (57%), Gaps = 3/183 (1%) Query: 51 QLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLG 110 ++ N L + + HQGI A+++P Y +L D+ + + + ILD +TD N+G Sbjct: 69 EIVNNDILSKLLENHTHQGIAAKIRPIFSY---NLEDIDITNPKCKIAILDQITDTQNIG 125 Query: 111 ACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIW 170 A +RSA A ++A+I+P+D S + K ACG E +P+I+VTNL M L++ W Sbjct: 126 AIIRSAAAFDINAIILPQDNSPNESGGIAKAACGTLELIPIIKVTNLRSCMNYLKKHGFW 185 Query: 171 IVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVA 230 I+G G A+ ++ ++ LV G+E +G+RRL E CD L IP++ V SLNVS A Sbjct: 186 IIGLTGSANDYFTDKLISDKIVLVFGSEDKGIRRLVAETCDYLAKIPISQRVESLNVSNA 245 Query: 231 TGI 233 I Sbjct: 246 ASI 248 >UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=Mobiluncus mulieris RepID=C2KTT3_9ACTO Length = 354 Score = 132 bits (333), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 71/149 (47%), Positives = 100/149 (67%), Gaps = 2/149 (1%) Query: 95 PFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRV 154 P L+ LD VTDPHNLGA LRSA A G VI+P+ R+A +NA A KV+ GAA VP+ + Sbjct: 206 PLLVALDQVTDPHNLGAVLRSAAAFGADGVIIPEHRAASVNAAAWKVSAGAAAIVPVAQA 265 Query: 155 TNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTG-RLALVMGAEGEGMRRLTREHCDEL 213 TNL R ++ L+ +++G G D L ++T L +V G+EG G+ RL R+ CD++ Sbjct: 266 TNLTRALQDLKRAGAFVIGLDGGGDVALPDLQLTDVPLVVVTGSEGRGISRLVRDTCDQI 325 Query: 214 ISIPMAGSVSSLNVSVATGICLFE-AVRQ 241 +SIP+A + SLN +VATGI L++ AVR+ Sbjct: 326 VSIPIAPRMESLNAAVATGIALYQIAVRR 354 >UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0N3_9FIRM Length = 297 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 1/151 (0%) Query: 93 DQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLI 152 ++P +L+LD + DP NLGA +R+A AGVH +I+ KDR+A + T KV+ GA S+P I Sbjct: 146 EKPLVLVLDRIEDPRNLGAIIRTARCAGVHGIIIAKDRAAGITPTVAKVSEGAIFSIPCI 205 Query: 153 RVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDE 212 VTNLA ++ L++ W+ D + ++ + G +ALV+G EG+G+ +L D Sbjct: 206 MVTNLAAALKDLKQRGFWVYAADANGD-SCFEQEFGGSVALVLGNEGKGISKLCLNESDY 264 Query: 213 LISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 +SIPM SLNVSVA GI ++E VR+ + Sbjct: 265 KVSIPMVNDFDSLNVSVAAGILMYEIVRKNN 295 >UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Thermotogaceae RepID=C5CF29_KOSOT Length = 250 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/240 (31%), Positives = 125/240 (52%), Gaps = 4/240 (1%) Query: 5 IYGIHAVQALLERAPERFQ---EVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++G + ++ +L+ P++ + +F + D+ L L +G +++ + L Sbjct: 3 LHGRNVLREILKLEPKKLKIKKVLFTDQKNVDRELEELKEHTAKKGYRMEVVPPEKLFNL 62 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 S HQG++ +K L D I + L++LD + DPHNLGA +RS+ AAG Sbjct: 63 SREKKHQGVVINLKEFPYTSLETLLDKIMEKKRSLLVLLDRIQDPHNLGAIIRSSVAAGA 122 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+ + S ++ KV+ G +P++RV N+ART+ L+EE W E + Sbjct: 123 DGVIITEKASVEVTPAVVKVSTGLVFRIPIVRVVNMARTIETLKEEGFWTYAATMEGE-P 181 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 Y T + AL+ G EG+G+R L ++ D L+SIPM + SLNV+ + I LFE RQ Sbjct: 182 YYSVSFTDKAALIFGNEGKGIRHLVKKKSDYLVSIPMCEGIDSLNVAASAAIMLFEYRRQ 241 >UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae RepID=A2U3D3_9FLAO Length = 248 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 2/240 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I+G+ A+ +E ++++ KG L ++ + + L+ S Sbjct: 7 IFGLRAIIEAIESG-STINKIYLQKGLRGSLYYELDKLIKDSKIATSTVPVEKLNRLSKN 65 Query: 65 AVHQGIIARVKPGRQYQ-ENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 + HQG +A++ P Y E L D + + PF LILD ++D N GA +R+A+ GV+ Sbjct: 66 SNHQGAVAQISPIDFYDLETLLDDTLEAEKVPFFLILDQLSDVRNFGAIIRTAECTGVNG 125 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I+ K+ SA +NA K + GAA +P+ +V ++ + +LQ NI V + D ++Y Sbjct: 126 IIIQKNGSAPVNAETIKTSAGAAFKMPICKVDHIKDALFILQASNIKTVAATEKTDSSIY 185 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 +A++MG+E G+ + D +P++G++ SLNVSVA G+ L+E VRQRS Sbjct: 186 DVNFNQPIAIIMGSEHRGVNPSVLKMVDYKAKLPLSGNIESLNVSVACGVFLYETVRQRS 245 >UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=B2S257_TREPS Length = 292 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/164 (45%), Positives = 96/164 (58%), Gaps = 5/164 (3%) Query: 81 QENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKK 140 QE L +A+ +L+LD +TDPHN+GA +RSAD V AV++P A T + Sbjct: 117 QERTLLHALATHTHALVLVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGGTETITR 176 Query: 141 VACGAAESVPLIRVTNLARTMRMLQEENIWIVG--TAGEADHTLYQSKMTGRLALVMGAE 198 V+ GA VPL+RV NL RT +L+ W+ G AGEA + + ALV+G E Sbjct: 177 VSAGAVAWVPLVRVRNLVRTAGILKRSGFWLYGADVAGEA---IGARTFPPKTALVLGNE 233 Query: 199 GEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 G G+ L R HCD LISIP G+V SLNVSVA GI L+E R + Sbjct: 234 GHGVSPLLRTHCDALISIPTQGNVDSLNVSVAAGILLYEIRRSQ 277 >UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacteria RepID=Q7MTU3_PORGI Length = 249 Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 84/242 (34%), Positives = 130/242 (53%), Gaps = 5/242 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +MI+G+H++ E E ++FI +G + ++ +I + V + + LD + Sbjct: 5 KMIFGLHSISEAFEAGKE-IDKIFIRRGLKTEQTEAIIREAVERCVPVMHVPIEKLDRLT 63 Query: 63 DGAVHQGIIARVKPGRQYQEND--LPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 HQG++A + +Y D +P L PFLL+LDG+TD N GA R+A+ AG Sbjct: 64 SKN-HQGVVA-ILSAIEYTRLDQLMPMLYEEGKAPFLLLLDGITDVRNFGAIARTAECAG 121 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V A+I+P+ S + A K + GA +P+ RVT++ +R LQE I IV + +A Sbjct: 122 VDAIIIPERGSVSVGGDAIKTSAGALHRIPVCRVTSIPGAIRSLQEYGIRIVAASEKAAD 181 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 M L +VMGAE G T D +++IP G++ SLNVSVA GI ++E VR Sbjct: 182 LYTDVPMKLPLGIVMGAEDVGPSPDTLRMADGIVAIPQMGAIGSLNVSVAAGIVIYEVVR 241 Query: 241 QR 242 Q+ Sbjct: 242 QQ 243 >UniRef50_B8H4C5 23S rRNA Gm2251 methyltransferase n=3 Tax=Caulobacteraceae RepID=B8H4C5_CAUCN Length = 278 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 90/245 (36%), Positives = 125/245 (51%), Gaps = 15/245 (6%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK- 61 + I+G HAV+A L + + KRL P + L +Q+ Q + ++ Sbjct: 39 DWIWGTHAVEAALANPRRPAPKRLLATPDRAKRLAPHLQKL----TCLQVMEGQEIAKQL 94 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP---FLLILDGVTDPHNLGACLRSADA 118 GAVHQG+ ++ + P IA L P FL++LD +TDP N+GA RSA A Sbjct: 95 PQGAVHQGLALKI-------DEPEPLTIAELGTPAKGFLVMLDQITDPQNIGAIFRSAAA 147 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G VI+ + L+ K A GA + P RV NL+R + L + V AGEA Sbjct: 148 FGAKGVILQDRHAPALSGVLAKTAVGAVDKAPYARVVNLSRALEELADLGWRAVALAGEA 207 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + +L + LV+G+EGEG+RRL EHCD L IPM G SLNVS A I L+EA Sbjct: 208 EQSLDAVLDSQPTVLVLGSEGEGVRRLVAEHCDALGKIPMPGGFESLNVSAAAAIALYEA 267 Query: 239 VRQRS 243 + R+ Sbjct: 268 SKVRA 272 >UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A6L4B5_BACV8 Length = 255 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/242 (31%), Positives = 128/242 (52%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +EMI+G+ AV ++ A +V + K + + L L++ + +Q + ++ Sbjct: 5 NEMIFGVRAVIEAIQ-AGREIDKVLVKKDIQSELSKELFACLKNTLIPVQRVPVERINRI 63 Query: 62 SDGAVHQGIIARVKP-GRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + HQG++A + Q E+ +P L P ++LDG+TD N GA R+ + AG Sbjct: 64 TRKN-HQGVVAFISSVTYQKTEDLVPFLFEEGKTPLFVMLDGITDVRNFGAIARTCECAG 122 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 A+I+P S +NA A K + GA ++P+ R NL T++ L++ IV + D+ Sbjct: 123 ADAIIIPSKNSVSVNADAMKTSAGALHTLPVCREQNLTNTIKYLKDCGFKIVAATEKGDY 182 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++ + ++MGAE G+ CDE I IP+ G + SLNVSVA GI ++EAV+ Sbjct: 183 DYTKANYKDPVCIIMGAEDTGVPYEHLSLCDEWIKIPLMGKIESLNVSVAAGILIYEAVK 242 Query: 241 QR 242 QR Sbjct: 243 QR 244 >UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPE7_SYNFM Length = 252 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 81/227 (35%), Positives = 123/227 (54%), Gaps = 11/227 (4%) Query: 21 RFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQY 80 R + + ++ R D+R+ L+ +G+ + R L A HQG+ R++ Sbjct: 28 RVEVLEMIVARSDQRVRELVELGALRGIAPRQETRDGLSALVGHAHHQGVALRMR----- 82 Query: 81 QENDLPDLIASLDQPF-----LLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLN 135 E L A L++P L+ILD + DP NLGA LRSA G VIVP+DRSA++ Sbjct: 83 -EFPYAALEALLEKPTGEREPLVILDCLQDPQNLGAMLRSACFLGARGVIVPRDRSARVT 141 Query: 136 ATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVM 195 +T ++A GA +P+I+V NL R + L+E +WI G +A T+Y + +T L LV+ Sbjct: 142 STVIRIAAGATAYLPVIQVNNLVRALEQLKECGLWIFGLDAQAAQTIYDADLTVPLGLVV 201 Query: 196 GAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 G E +G+R L CD ++ IP G + SLN + + I L E R+R Sbjct: 202 GNEQKGLRPLVARACDAMVRIPEHGPLQSLNAATSGAIALAEVQRRR 248 >UniRef50_Q0BYS7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYS7_HYPNA Length = 269 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 86/239 (35%), Positives = 124/239 (51%), Gaps = 14/239 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK-S 62 ++G HAV A L +F + + K L + + QLA + +D + Sbjct: 37 WLWGTHAVMAALANPARKFHTLLATENAAQK--------LPAGVISPQLATAKEIDNRLP 88 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 GAVHQGI R P +E L D+IA+ + +LD V+DPHNLGA RSA A G Sbjct: 89 PGAVHQGIALRADP---LEEAILEDVIAA-GATRIAVLDQVSDPHNLGAIFRSAAAFGFE 144 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +++ + + K A GA E+V IR N+AR + L E + VG AGE+ +L Sbjct: 145 GLVLQTRNAPPITGIVAKSAAGAIETVTEIRAVNIARALEQLAEADFHTVGLAGESTRSL 204 Query: 183 YQS-KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++ K ++A+V+GAEG G+R + C EL IP+A + SLNVS A I +EA R Sbjct: 205 DEAVKGAAKVAIVLGAEGSGLRPAVAKACSELARIPIAAQMESLNVSNAAAIAFYEASR 263 >UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Flexibacteraceae RepID=D2QM84_9SPHI Length = 276 Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 84/248 (33%), Positives = 139/248 (56%), Gaps = 16/248 (6%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQG-VVIQLANRQYLDEK 61 EM++GI +V L ++ ++ ++++ KG + P I L Q V IQ + LD Sbjct: 31 EMVFGIQSVIETL-KSDQQIDKLYMEKGLSN----PDIQNLAFQKRVTIQRVPVERLDRF 85 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASL----DQPFLLILDGVTDPHNLGACLRSAD 117 + HQG++ + Q Q L ++IA + + PF L+LD +TD N GA R+A+ Sbjct: 86 TRKN-HQGVVCLIA---QVQYVKLSNVIADVFERGEVPFFLLLDRITDVRNFGAIARTAE 141 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 G+ +++P +A +N+ A K + GA + + R +L T++ LQE I +V + Sbjct: 142 CTGIQCIVIPGRGAAAINSDAMKTSSGALNHISVCREPDLTETVKYLQESGITVVACTEK 201 Query: 178 ADHTLYQ--SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + LY+ + +TG +A++MG+E +G+ D + IP+ G+V SLNVSVATG+ L Sbjct: 202 SARDLYERTTDLTGPMAIIMGSEEDGISPELLRMVDTHVKIPLLGAVGSLNVSVATGVIL 261 Query: 236 FEAVRQRS 243 +EAVRQRS Sbjct: 262 YEAVRQRS 269 >UniRef50_Q0BV71 23S rRNA Gm2251 methyltransferase n=13 Tax=Acetobacteraceae RepID=Q0BV71_GRABC Length = 441 Score = 129 bits (324), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 97/242 (40%), Positives = 139/242 (57%), Gaps = 16/242 (6%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRL---LPLIHALESQGVVIQLANRQYLDE 60 ++G+HAV+A L R P R +L + L LP AL V + R ++D+ Sbjct: 209 WLHGLHAVEAAL-RNPARRLRRLLLTEEAEATLAERLPPPWAL-----VAERTERAHMDQ 262 Query: 61 K-SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 +VHQGI + L +++A P +L+LD V+DP N+GA LRSA A Sbjct: 263 LLGTESVHQGIALLAD---KLPSPPLGEILAQRPGP-VLVLDQVSDPRNVGAILRSAAAF 318 Query: 120 GVHAVIVPKDRSA-QLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 VIV +DR+A + + T K A GA + +P++RV N+ART+ L+ ++W+VG E Sbjct: 319 QACCVIV-QDRNAPEESGTMAKAASGALDRLPMLRVVNIARTLAALKAADLWVVGLDAEG 377 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + R+ALVMGAEG+G+RRLTRE CDE++S+ MA + SLNVSVAT I L+E Sbjct: 378 APLSGPALGKRRVALVMGAEGDGLRRLTRESCDEIVSLAMAEGMESLNVSVATAIALYEI 437 Query: 239 VR 240 R Sbjct: 438 SR 439 >UniRef50_C1ZH71 rRNA methylase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZH71_PLALI Length = 262 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/165 (41%), Positives = 96/165 (58%) Query: 76 PGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLN 135 PG Q++D + S L LD + DPHN+GA R+A GV +I +DRSA L+ Sbjct: 98 PGPLAQKSDASGGVESNRHGIWLALDCLQDPHNVGAVFRAAAFFGVRGIIATRDRSAPLS 157 Query: 136 ATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVM 195 TA V+ G ES+P + NLAR + + ++ +W++GT+ A L K +V+ Sbjct: 158 GTAYDVSAGGLESIPFAQPPNLARALELAKKSGVWVLGTSEHAQQPLSSIKADRPWLIVI 217 Query: 196 GAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 G E G+RRLT E CDE+ +IP G+V SLNVSVATGI L+ R Sbjct: 218 GNEEGGLRRLTLELCDEVCTIPSQGAVGSLNVSVATGILLYALSR 262 >UniRef50_A6G5X9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5X9_9DELT Length = 325 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 85/248 (34%), Positives = 130/248 (52%), Gaps = 21/248 (8%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 + G AV LL +P R + + + +GR + L L + V I+ R+ D+ Sbjct: 78 VPGERAVVELLRASPTRVRRLLLEEGRRFESLEALAAEALGERVTIERVEREIFDDLIGP 137 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASL-------------DQPFLLILDGVTDPHNLGA 111 + +G++A +P R++ D L+ +++LDGV DPHNLGA Sbjct: 138 GLARGVLAVTRPPRRW---DFEALLEGGPEAEGGEAVRTRRGHRIIVLLDGVQDPHNLGA 194 Query: 112 CLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI-W 170 +R+A+ G AV+ +DR+A L+A A + + GA E +PL +VTN+AR + + W Sbjct: 195 VIRNAEFFGATAVVWGQDRAAPLSAVAVRSSAGATERLPLGQVTNVARALEQAKASGTWW 254 Query: 171 IVGTA---GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNV 227 +VGT G H Q + + LV+G+E GMRRLTRE CD L++I GS+ SLNV Sbjct: 255 VVGTVVDEGTPVHEFAQDPPSD-MILVLGSEERGMRRLTRERCDFLVTIARGGSLGSLNV 313 Query: 228 SVATGICL 235 S A + L Sbjct: 314 SAAGAVAL 321 >UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Fusobacteriaceae RepID=D0GJ12_9FUSO Length = 244 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/236 (29%), Positives = 130/236 (55%), Gaps = 9/236 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E I GI+ V +L ++ + +++ + KG + + +++ + + I Y D ++ Sbjct: 14 EKIIGINPVTEVL-KSDKNIEKIEVYKGIKKDTIKEILNLASKRNIKIF-----YTDRRT 67 Query: 63 DGAVHQGIIARVKPGRQYQE-NDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + + QG++A V Y E + + + + D+ ++ILD + DP N GA +RSA+ GV Sbjct: 68 ENS--QGVVALVSEFDYYLELTEFFEKVLAKDKSIVVILDQIQDPRNFGAIIRSAECFGV 125 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +++ + ++ T K + GA E V +I+VTN++ T+ ++ + G + ++ Sbjct: 126 DGIVIQDRNNVKVTETVVKSSTGAIEHVDIIKVTNISDTIDKFKKYGYKVYGAEADGENL 185 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 Y+ ++ LV+G+EG GMR+ REHCD+ + I + G +SLNVSVA GI L E Sbjct: 186 YYEESYPKKVCLVLGSEGNGMRKKVREHCDKTLKIHLKGQTNSLNVSVAGGIILAE 241 >UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9D9_9ACTN Length = 302 Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 115/216 (53%), Gaps = 5/216 (2%) Query: 30 GREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLI 89 G D L L+ L + GV I+ R LD S HQGI V + D+ D++ Sbjct: 83 GERDAALSRLVDDLNAAGVRIKYVPRAQLDALSSHGAHQGIALEVG---NFPYADVADIL 139 Query: 90 A-SLDQPFLLI-LDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAE 147 + D P L++ LD VTD N GA +RSA+ G VI+ R+A + + K + GA Sbjct: 140 DRAGDGPALVVVLDHVTDDGNFGAIVRSAEVVGAAGVIIANKRAAGVTVGSYKTSAGAVM 199 Query: 148 SVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTR 207 +P+ +V N+AR + L+ W+ G + A+ + + + GR+ALVMG+EG+G+ RL Sbjct: 200 HLPIAQVPNIARALDDLKAAGFWVSGASERAEGSCWDAPFEGRVALVMGSEGDGISRLVL 259 Query: 208 EHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 E CD L +P G SLNV+ AT FE +R+ + Sbjct: 260 EKCDFLTKLPQRGMTESLNVAQATTALCFEWLRRNA 295 >UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Anaplasma RepID=Q2GL62_ANAPZ Length = 258 Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 79/239 (33%), Positives = 129/239 (53%), Gaps = 8/239 (3%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE-KSD 63 IYG HA + L+ E+ I DK P+I +++ + I+ +D Sbjct: 12 IYGKHACLSALKNPNRVCIELLITHKFIDKND-PVIKLAKNRKIGIRDVEIAKIDSLVGS 70 Query: 64 GAVHQGIIARVKP--GRQYQE-NDLPDLIASLD---QPFLLILDGVTDPHNLGACLRSAD 117 A+HQG++ +V P GR + D++A + +L+LD VTD HN+GA LR+A Sbjct: 71 KAIHQGMLLKVLPLFGRNASSLIRIEDIVAQTEAAPTSTILVLDEVTDVHNVGAVLRTAA 130 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 V AV++ + S + K + GA + VP++ + NL +T+ L+++N W G Sbjct: 131 CFNVDAVVLTEHNSPSESCGMAKASSGAIDIVPVVCIGNLVKTLEYLKQKNYWCYGFDAS 190 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 L+Q + + R +++GAEG+GMR LT++HCD L+ IPM+ + SLNVS A I ++ Sbjct: 191 GGTCLHQVEFSERRVVILGAEGKGMRHLTKKHCDHLVKIPMSEKMESLNVSNAAAIAMY 249 >UniRef50_A7IKP0 RNA methyltransferase, TrmH family, group 3 n=13 Tax=Rhizobiales RepID=A7IKP0_XANP2 Length = 288 Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 89/244 (36%), Positives = 123/244 (50%), Gaps = 23/244 (9%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG H V + RF+ L+ E+ IH L +G+ +A D Sbjct: 56 LLYGWHTVAEAIGNPKRRFRR---LRATENA-----IHRLAEEGLTPPIAPEIVRPGDID 107 Query: 64 -----GAVHQGIIARVK--PGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSA 116 AVHQG++A V P + ++ IA D +L+LD +TDPHN+GA +RSA Sbjct: 108 KLLGADAVHQGLLAEVDHLPSPRLKD------IAKTD--LVLVLDQITDPHNVGAIVRSA 159 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 A V A++ S K A G E VP VTNLAR + L+E + +VG Sbjct: 160 AAFAVSAIVTTARHSPAATGVLAKSASGGLEHVPFCLVTNLARALTELKENGMLVVGLDS 219 Query: 177 EADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 E L + M LALV+GAEG+G+R+LTRE CD L I + G++ SLNVS A + L Sbjct: 220 EGPADLEDTPMRAPLALVLGAEGKGLRQLTRETCDVLARIDLPGAIKSLNVSNAAALSLG 279 Query: 237 EAVR 240 A R Sbjct: 280 MARR 283 >UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H8_FLAB3 Length = 265 Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 69/178 (38%), Positives = 101/178 (56%), Gaps = 3/178 (1%) Query: 67 HQGIIARVK--PGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAV 124 HQG++A + P Q+ LP L PFLLILD +TD N GA R+A+ GVHA+ Sbjct: 84 HQGVVAFISDVPFESIQDV-LPQLFEEGKTPFLLILDRLTDVRNFGAICRTAECVGVHAI 142 Query: 125 IVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQ 184 I+P+ +A +N+ A K + GA ++ + + NLA + LQ+ + + + +A +Y Sbjct: 143 ILPEKGAAPINSDAIKTSAGAIYNLRICKEKNLAHAVDFLQQSGLQVFSASEKAQKLIYD 202 Query: 185 SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 T A+VMG E G+ + H DE I +P+ G SLNVSVA G L+EAVRQ+ Sbjct: 203 VDFTQPCAIVMGNEETGISKEVLHHSDEKIKLPIEGKTQSLNVSVACGAILYEAVRQK 260 >UniRef50_O51468 Uncharacterized tRNA/rRNA methyltransferase BB_0516 n=21 Tax=Borrelia RepID=Y516_BORBU Length = 228 Score = 126 bits (316), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 69/206 (33%), Positives = 116/206 (56%), Gaps = 9/206 (4%) Query: 44 ESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGR----QYQENDLPDLIASL---DQPF 96 ++Q + I N LD+ H+G ++K + + Q D +L+ + + F Sbjct: 20 KTQNIKIIRINTNELDKILKNKDHRGFALKLKLEKNKNVKTQTKDFENLLETFKKKENAF 79 Query: 97 LLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTN 156 +L+LD + DP N GA LR+A+ + VI + RSA+ N+T + + GA++ V + VTN Sbjct: 80 ILLLDEIEDPQNFGAILRTAEQFSIDLVITTQKRSAKDNSTVLRTSSGASQYVKKMTVTN 139 Query: 157 LARTMRMLQEENIWIVGTAGEADHTLYQSKMTG-RLALVMGAEGEGMRRLTREHCDELIS 215 + T+ +L+ WI T + + K+ ++AL++G EG+G+ +L +E+ D LI Sbjct: 140 INNTINLLKNYGFWIY-TGDIKGQDINKIKINDKKIALILGNEGKGVHKLIKENSDFLIR 198 Query: 216 IPMAGSVSSLNVSVATGICLFEAVRQ 241 IP +G + SLNVSV+TGI +FE RQ Sbjct: 199 IPTSGKIDSLNVSVSTGILIFEIKRQ 224 >UniRef50_Q04SA9 TRNA (Guanosine-2'-O-)-methyltransferase n=4 Tax=Leptospira RepID=Q04SA9_LEPBJ Length = 253 Score = 126 bits (316), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 72/187 (38%), Positives = 107/187 (57%), Gaps = 3/187 (1%) Query: 58 LDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP--FLLILDGVTDPHNLGACLRS 115 LD G HQG++A P RQ Q +D +L L + L+LD + DP NLG LR+ Sbjct: 68 LDSLVPGRNHQGVVALKSPFRQ-QISDKKNLEEYLSEKPGTFLVLDRIQDPGNLGNILRT 126 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 A+ GV +I+P+ SA + +KV+ GA + + V NLA T+ +L+E WIV T+ Sbjct: 127 AECFGVTNIILPERESAGITPVVEKVSSGALSFLKIFTVKNLANTLELLKENGYWIVSTS 186 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + LA++MG EGEG++R+ E D ++ IP+ G++SSLNV+VATGI L Sbjct: 187 DRGTENWSKLPELKELAILMGNEGEGVKRILLEKSDFVLRIPIHGNLSSLNVTVATGIVL 246 Query: 236 FEAVRQR 242 V ++ Sbjct: 247 DRIVNRK 253 >UniRef50_A9GVZ1 tRNA/rRNA methyltransferase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GVZ1_SORC5 Length = 248 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 83/246 (33%), Positives = 121/246 (49%), Gaps = 7/246 (2%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS ++YG+ V+ + R V + + K L L E QG+ + A R LD Sbjct: 1 MSRLVYGLQPVREAIRAHGARVGWVLVQRDGGPK-LDALARLAEGQGIPTERAPRNELDR 59 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP----FLLILDGVTDPHNLGACLRSA 116 +S G HQG +A + +++P + QP + LDGV DP N GA +RSA Sbjct: 60 RSAGGRHQGAVASAPELQIVGVDEIP--VVEEGQPGAGTITVALDGVMDPQNFGAVIRSA 117 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 A G A++ P+ SA L + + GA E L RV +L + L + + Sbjct: 118 VALGARAILWPEHSSAPLTPATFRASAGAIEHARLCRVPSLPDALEALAARGVAAIALDA 177 Query: 177 EADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + L + +TG +A+V+GAE +G RR R C + +PM G +SSLN SVA I L+ Sbjct: 178 QGPVELGELPLTGPVAIVIGAEDKGTRRSVRRVCQHVARLPMTGPISSLNASVAGAIALY 237 Query: 237 EAVRQR 242 E VRQR Sbjct: 238 EVVRQR 243 >UniRef50_Q1GEY5 RNA methyltransferase TrmH group 3 n=13 Tax=Rhodobacterales RepID=Q1GEY5_SILST Length = 262 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 86/243 (35%), Positives = 133/243 (54%), Gaps = 15/243 (6%) Query: 4 MIYGIHAVQ-ALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLAN-RQYLDEK 61 ++G+HAV+ ALL E+ + V L + L A+ + G+ ++ + R++ Sbjct: 28 WLFGLHAVRDALLNPKREKLRLVVTLNAQNK-----LEDAIATSGITPEVVDPRKFSVPI 82 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 G+VHQG VKP L D + P +++LD VTDPHN+GA LRSA+ G Sbjct: 83 DPGSVHQGAALEVKP---LNWGGLEDNCIGAEVPRVILLDRVTDPHNVGAILRSAEVLGA 139 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AVI + SA K A GA E P +R+ NL+ T+ LQ+ ++G GEA+ T Sbjct: 140 SAVIGTRHHSAPETGALAKTASGALERQPYLRMRNLSDTIVALQQMGYLVLGLDGEAEET 199 Query: 182 LYQSKMTGR----LALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 + ++ + GR +ALV+GAEG G+R+ T+E D+L+ I A SLNVS A + L+ Sbjct: 200 IEEA-VAGRTKEPIALVLGAEGPGLRQKTKETVDKLVKIDAARGFGSLNVSNAAALSLYA 258 Query: 238 AVR 240 +++ Sbjct: 259 SLK 261 >UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXH9_MYCAP Length = 233 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 66/176 (37%), Positives = 102/176 (57%), Gaps = 5/176 (2%) Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 HQG + +K Y+ D+I + +LILD + DPHN GA +R+A+AAG+ +I+ Sbjct: 60 HQGYLLFLKDFNYYE----IDVIKKDNPKTVLILDHIHDPHNFGAIIRTANAAGIKHIII 115 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS- 185 PKDRS + +T KV+ G V +I+V+N+A ++ L++ WI + + + Y Sbjct: 116 PKDRSTDVTSTVLKVSSGGFVGVKIIKVSNIASSIEKLKKWGFWIYSSLLDENAVPYNKV 175 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + G ALV+G E +G+ + D + IP G+V S+NVSVATGI LFE V + Sbjct: 176 QYAGNCALVVGNEEKGISKPVVNATDVKVYIPQFGTVQSMNVSVATGILLFELVNR 231 >UniRef50_A1B8P8 RNA methyltransferase, TrmH family, group 3 n=29 Tax=Rhodobacterales RepID=A1B8P8_PARDP Length = 265 Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 89/229 (38%), Positives = 121/229 (52%), Gaps = 10/229 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQY-LDEKS 62 ++G+HAV+ L P R + ++ RL PL L + V + +R L +S Sbjct: 30 WLFGLHAVRDALAN-PRREKLRLVVTRNALDRLGPLPPDLAHEIVDARTFDRAVPLPAES 88 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 VHQG V+P + DL ++ +P L+ LD VTDPHN+GA LRSA+ G Sbjct: 89 ---VHQGAALEVRPLKWGSLVDL--ALSGPGRPLLVALDRVTDPHNVGAILRSAEVFGAR 143 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AVI P SA K A GA E P +RVTNLA T+ LQ ++G G D L Sbjct: 144 AVIAPARHSAPETGALAKTASGALERQPYLRVTNLADTLIELQSMGYTVLGLDGTGDELL 203 Query: 183 YQS--KMTGR-LALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVS 228 ++ ++GR + LV+GAEG G+R TRE CD ++ IP A SLNVS Sbjct: 204 PEALRDLSGRAICLVLGAEGPGLRERTRETCDRILRIPFAADFGSLNVS 252 >UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A0M5B1_GRAFK Length = 245 Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 74/239 (30%), Positives = 124/239 (51%), Gaps = 2/239 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I+GI V ++ + + ++VFI K L L+ I + L++ S Sbjct: 7 IFGIRTVIEAID-SKKDIEKVFIQKDLSGPLFKELNRNLKEGNYNISYVPVEKLNKLSKN 65 Query: 65 AVHQGIIARVKP-GRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQG++A + P G E + D S P ++LDG+TD N GA +R+A+ GV Sbjct: 66 GNHQGVVANISPIGFVSLEKLVEDSQKSSTTPLFVLLDGITDVRNFGAIIRTAECCGVTG 125 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I+ + SA +NA K + GA ++P+ +V ++ + LQ +I ++ + D ++ Sbjct: 126 IIIQEKGSAPINADTVKTSAGAVFNIPICKVNHIKDAVFHLQTYDIKLIAATEKTDDVIF 185 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + +A++MG E +G+ + D +PM GS++SLNVSVA G L+EAVRQR Sbjct: 186 DIDLKQPIAIIMGDEAKGISNSILKSVDYKAKLPMLGSIASLNVSVACGAFLYEAVRQR 244 >UniRef50_B0T2B4 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Caulobacteraceae RepID=B0T2B4_CAUSK Length = 278 Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 89/253 (35%), Positives = 122/253 (48%), Gaps = 31/253 (12%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLP------LIHALESQGVVIQLANRQ 56 + I+G HAV+A L + + KRL P + +E + QL Sbjct: 39 DWIWGTHAVEAALSNPARPAPKRLLATADRAKRLAPNLAKAPFLTIMEGAEIARQLPT-- 96 Query: 57 YLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLD-----QPFLLILDGVTDPHNLGA 111 GAVHQG+ ++ D P+ ++ D Q L++LD +TDP N+GA Sbjct: 97 -------GAVHQGVALKI---------DEPEALSVYDLGTPAQGLLVMLDQITDPQNIGA 140 Query: 112 CLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWI 171 RSA A G VI+ + L K A GA + + RV NL+R + L + Sbjct: 141 IFRSAAAFGARGVILQDRHAPALTGVLAKTAVGAVDKIAYARVVNLSRALEELADLGWRA 200 Query: 172 VGTAGEADHTLYQSKMTGR-LALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVA 230 V AGEA TL Q + GR LV+G+EGEG+RRL EHCD + I M G SLNVS A Sbjct: 201 VALAGEAQQTLDQV-LDGRPTVLVLGSEGEGVRRLVSEHCDAMGKIAMPGGFESLNVSAA 259 Query: 231 TGICLFEAVRQRS 243 + L+EA + RS Sbjct: 260 AAVALYEASKVRS 272 >UniRef50_A5V919 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alphaproteobacteria RepID=A5V919_SPHWW Length = 247 Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 9/168 (5%) Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSA---DAAGV 121 A HQG++ V P DL + A D+ L++LD VTDPHN+GA LRSA DA G Sbjct: 71 APHQGLVIEVDPLPDIWLGDLLE-AAQGDRRPLVVLDQVTDPHNVGAVLRSAAAFDAVG- 128 Query: 122 HAVIVPKDRSAQLNATA-KKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 IV +DR A + A + A GA E VP +RV NLAR + + E W +G +G A Sbjct: 129 ---IVTQDRHAPPESGALARSASGALELVPWVRVVNLARALDEIAEAGFWRIGLSGHARG 185 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVS 228 TL Q R+A+V+GAEGEGMR+ T HCDEL +P++ V SLN+S Sbjct: 186 TLAQVMGDSRIAIVLGAEGEGMRQNTEAHCDELAKLPISPKVESLNIS 233 >UniRef50_A3VTQ4 RRNA methylase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTQ4_9PROT Length = 243 Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 85/240 (35%), Positives = 126/240 (52%), Gaps = 14/240 (5%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQG--VVIQLANRQYLDEK- 61 +YG H V+A L P+R Q V +L R + L+ +G + I + +D+ Sbjct: 14 LYGRHTVEAALGN-PQRHQ-VKLLATRNA------LGWLKERGRTITIDPVTPKDIDKAL 65 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 GAVHQG+ P L +++ + + LL+LD +TDP N+GA R A A Sbjct: 66 PPGAVHQGLAMLANP---LPSPSLAEILENGETGPLLVLDQITDPQNIGALFRLAAAFSA 122 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AVI R+ L K A GA E VP I V N++R + ++E++I I G AGE + Sbjct: 123 KAVIAQDRRTPPLGGPLAKAATGAVECVPFIPVVNISRALEAIREKHIPIFGLAGEGALS 182 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L + T ALV+GAEG+G+R R CD+L++IP+ + SLNV+ A I L+ R+ Sbjct: 183 LRDTAPTRTCALVLGAEGKGLRPGVRAVCDQLVAIPIDPQIESLNVATAAAISLYHLGRE 242 >UniRef50_C6XLJ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLJ1_HIRBI Length = 272 Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 83/241 (34%), Positives = 124/241 (51%), Gaps = 10/241 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE-KS 62 I+G+HAV + L+ + F + K L H QLA+ + +D+ Sbjct: 35 WIWGVHAVASALKNNSRKKIRAFFTRNGAQKLGLDAEHLPH----YAQLADPKDIDKLVP 90 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 +VHQG++ R+ D D++A+ + P ++ILD VTDP N+GA RS A G Sbjct: 91 PDSVHQGVVLH---ARELDGVDFEDVLANGEGP-IVILDQVTDPQNVGAVFRSCAAFGAK 146 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AVI+ S L K A GA + +P + V N++R + L + W+VG G + + Sbjct: 147 AVIMQTRNSPNLGGALAKAAVGAIDIIPEVAVVNISRAVTALSDAGWWVVGMDGNTEIDI 206 Query: 183 YQSKMT-GRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 Q+ T LA+VMGAEG G+R L + C +L I ++ + SLNVS A I L+EA RQ Sbjct: 207 AQAFDTPAPLAIVMGAEGSGIRPLIAKGCSQLAKISISPQMESLNVSSAASIALYEANRQ 266 Query: 242 R 242 Sbjct: 267 N 267 >UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMX4_CHIPD Length = 263 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/231 (35%), Positives = 128/231 (55%), Gaps = 10/231 (4%) Query: 17 RAPERFQEVFILKGREDKRLLPLIHALESQ-GVVIQLANRQYLDEKSDGAVHQGIIARVK 75 +A + + +F+L+G + ++P I L Q + I L + L+ + A HQG +A + Sbjct: 36 KAGKAIERIFMLRGATGE-IIPQIRQLAEQYNIPINLVPVEKLNGLTS-ANHQGCVA-IT 92 Query: 76 PGRQYQENDLPDLIASLDQ----PFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRS 131 Y DL D+I+ + + P LILDG+TD N+GA RSA G A+I+P Sbjct: 93 GNINYL--DLQDVISHVTEQGQTPLFLILDGITDVRNIGAIARSAVCCGAQAIIIPDRGI 150 Query: 132 AQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRL 191 A LN A K + GA E++ + RV +L + + L I ++ + EA+ LY ++ + Sbjct: 151 AALNEEAIKSSAGALETISVCRVNSLLKAIDTLHLNGIKVIASEMEAETKLYDCQLQEPV 210 Query: 192 ALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 A++MG+E +G+ + D L IPMAG+ S NVSVA GI L+EA++QR Sbjct: 211 AVIMGSEDKGVFPALIKASDTLFHIPMAGNFESFNVSVAAGIILYEAMKQR 261 >UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Ruminococcaceae RepID=C7H9L6_9FIRM Length = 267 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 78/244 (31%), Positives = 127/244 (52%), Gaps = 6/244 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG + V LL ++ V I +G + G ++ + L + Sbjct: 24 LVYGKNPVTELL-KSGSGVDTVLIAEGMAPAVAAYYTAMAKEAGATVKRVHPNKLRLMTG 82 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAGVH 122 HQG+ A DL ++ +P FL++ DG+ DPHNLGA +RSA G H Sbjct: 83 TESHQGVAAFASEIEYVTVEDLLNVAREKGEPPFLVLSDGIEDPHNLGAVMRSALLCGAH 142 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +++PK A + T K + GAAE +P+ RV N+ T+R L+++ +++ A L Sbjct: 143 GIVIPKRGGASVTPTVIKSSAGAAERLPVARVANIGETIRRLKDQGVFVY-CADMDGVPL 201 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAG---SVSSLNVSVATGICLFEAV 239 ++ +TG +ALV+G+EG G+ +L ++ CD ++ + MA V S NVSVA GI L+E Sbjct: 202 RKNNLTGPIALVLGSEGSGVSQLVKKLCDGVVRLDMAAQGTGVDSFNVSVAAGIILYEIQ 261 Query: 240 RQRS 243 QR+ Sbjct: 262 SQRA 265 >UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM16_MYCA5 Length = 229 Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 77/249 (30%), Positives = 128/249 (51%), Gaps = 27/249 (10%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL-- 58 M +IYG ++V L +A ++++ KG +K I N +YL Sbjct: 1 MKNLIYGKNSVLDAL-KANFPIAKIYLQKGLVNK--------------AITFKNIEYLSI 45 Query: 59 ---DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFL-LILDGVTDPHNLGACLR 114 ++ HQG IA + YQ DL + D+P L L+LD + DPHN GA +R Sbjct: 46 QEMNQLVKNGNHQGYIAEI---YNYQYYDLGTIFK--DKPNLVLMLDHIQDPHNFGAIIR 100 Query: 115 SADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT 174 +A+ G+ +I+PK+R+ ++ T K++ GA + +IRV +L T++ LQ+ WI + Sbjct: 101 NANGFGIKHIIIPKNRACEVTPTVLKISSGAFTEIKIIRVGSLFDTLKELQKNGFWIYSS 160 Query: 175 AGEADHT-LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGI 233 + T L+++K L++G E G+ +H D L+ I G+V SLNV+ AT + Sbjct: 161 TLDDKATKLHKTKFATPTCLIVGNEESGVSHTLIKHSDALVYIEQKGTVQSLNVASATAV 220 Query: 234 CLFEAVRQR 242 L+EA ++ Sbjct: 221 LLYEATKEN 229 >UniRef50_B3CT02 tRNA/rRNA methyltransferase, TrmH family n=2 Tax=Orientia tsutsugamushi RepID=B3CT02_ORITI Length = 266 Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 62/175 (35%), Positives = 97/175 (55%), Gaps = 3/175 (1%) Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 VHQGI P N + + + + ILD + D +NLGA +RSA A + +I Sbjct: 89 VHQGIAVNTIP---LTINGIKHIDLATPNYKIAILDQLLDHNNLGAIIRSAAAFNISTII 145 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 +P++ S + N T K+A GA E + L++V NL T+ L++ WI+G + L + Sbjct: 146 LPENNSIEENGTIAKIAVGALEKINLVKVKNLYNTINYLKKYGFWIIGLDLNNSNQLTEQ 205 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++A V+G+E +G+R LTR+ CD LI IPM+ SLNV+ A I +E+ + Sbjct: 206 TFHSKMAFVLGSENKGLRNLTRQQCDFLIKIPMSHKTESLNVAGAATIIFYESFK 260 >UniRef50_Q6MIZ9 RNA methyltransferase, TrmH family, group n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MIZ9_BDEBA Length = 297 Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 79/241 (32%), Positives = 132/241 (54%), Gaps = 7/241 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQG-VVIQLANRQYLDEKS 62 ++ G HA+ +L+ P++ + ++ +G E+ L ++ L + + ++L L++ Sbjct: 55 VVIGTHAINEVLKVRPKQVKGFWLRQGFENSGDLRDMNELALKNHIKVELKAEAALEKF- 113 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 G QG V ++ D+ L LD+ +LILDG+ DPHNLGA LR++ G Sbjct: 114 -GPSQQGAAIFVDGAPEF---DMASL-EGLDKSMVLILDGIEDPHNLGAILRTSWLVGAQ 168 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 V++P+DR+ L T KVACG E VP+ TN A L+++ WI G + ++ Sbjct: 169 GVLIPEDRAVGLTPTVHKVACGGVEHVPVEETTNFANYAEELKKQGYWIYGLSPRGKRSI 228 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++ ++ ++ +G+E +GMR T CDEL+ IP A S +S N SVAT + L E +RQ Sbjct: 229 FELELPDKVVWAIGSEDKGMRVTTERLCDELVFIPQASSSASYNASVATAMALTETLRQH 288 Query: 243 S 243 + Sbjct: 289 A 289 >UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETE6_AMOA5 Length = 246 Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 67/178 (37%), Positives = 103/178 (57%), Gaps = 1/178 (0%) Query: 67 HQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 HQGI+A + P + + D + P ++ILDGVTD NLGA +R+A G HA++ Sbjct: 67 HQGIVALLSPVPLVTLSHIVQDTYEKGELPLIIILDGVTDVGNLGAIVRTAVCVGAHALV 126 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 +PK SA L + A K + GA +P+ R NL ++ LQ + ++ + ++YQ Sbjct: 127 LPKQGSASLGSGAMKTSAGALAHLPICREANLQASINYLQNSGLQVIACHEKTQTSIYQV 186 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 K+T A+++G+E +G++ D SIPM G +SSLNVSVA I L+E+ RQR+ Sbjct: 187 KLTVPTAILLGSEDKGIQPQLLNKVDVQASIPMVGPISSLNVSVAAAIILYESFRQRN 244 >UniRef50_A6BZU1 Gm2251 methyltransferase of 23S rRNA n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BZU1_9PLAN Length = 251 Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 80/232 (34%), Positives = 115/232 (49%), Gaps = 5/232 (2%) Query: 9 HAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQ--GVVIQLANRQYLDEK---SD 63 H+V A L+ P E+ + G + SQ VVI+ + Q + + Sbjct: 9 HSVMAALQTRPIDVTEIRLTAGSAQGSWGDVADEARSQRIPVVIKKSAPQKMKRRQAEDQ 68 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G G +A VKP + N+L L LD + DPHN+GA R+A GV Sbjct: 69 GRRTAGSVALVKPRTPFVLNELFPDSGQETGGLWLALDCIQDPHNIGAIFRTAAFFGVRG 128 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +++ KDRSA +NAT VA G E+VP TNL+R+M +E +WI+GT+ A+ + Sbjct: 129 IVLTKDRSAPINATVYDVASGGMEAVPFAVETNLSRSMTQAKETGVWIMGTSEHAEEDVS 188 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 +V+G E +G+RRLT E CD + + G V SLN SVA GI + Sbjct: 189 VYSQDRPWMVVIGNEEKGLRRLTLEQCDVVTRLTPTGIVDSLNASVAAGIMI 240 >UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31319 Length = 256 Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 76/241 (31%), Positives = 124/241 (51%), Gaps = 8/241 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVF-ILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++YG +AV L R Q ++ E+ L + H + V + +A+ +++ +S Sbjct: 21 ILYGRNAVHEAL-RGSREVQHIWATAHAVEEPWLAAVAHDASAVDVNV-VADGGWIERRS 78 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG+ A+V P R ++L +++ P ++ LD + DP NLGA R+A+ AG Sbjct: 79 GSPDHQGVCAQVAPFRYAYVDEL----LAVEHPLIVALDEIQDPQNLGAIARTAECAGAT 134 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +++P RSA + K + GA E +P+ R NLA + + W+ G G+ Sbjct: 135 GLVIPARRSADVTPAVCKASAGAVEHLPIARARNLADFLGDARGVGAWVYGAEGDGGVPY 194 Query: 183 YQSKMTGR-LALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +G + LV+G+EG G+R CD LI++P+ G + SLNVS A L+E VRQ Sbjct: 195 TGVDYSGPGVVLVLGSEGRGLRPRVAASCDALIALPLRGRIGSLNVSAAASALLYEIVRQ 254 Query: 242 R 242 R Sbjct: 255 R 255 >UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi RepID=B9KYY7_THERP Length = 261 Score = 120 bits (300), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 6/242 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDK-RLLPLIHALESQGVVIQLANRQYLDE 60 SE +YG +AV L R + +F+ G E R++ L+ A +G+ + + R LD Sbjct: 10 SEYLYGRNAVAEALRGR-RRHRRLFVASGIETHGRIVALMEAARVRGIPVIVIPRSELDR 68 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 HQG++ P Y D L+ + +L+LD + DP N+ LR+A+AAG Sbjct: 69 MVGSVNHQGVVLETSP---YPYVDFATLLDPAPESIVLLLDHLQDPQNIATLLRTAEAAG 125 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVG-TAGEAD 179 V V++P+ R+A + + GA E + + VTNLAR + L+E WIV G Sbjct: 126 VRGVVLPERRAAGITPAVVNASAGAVEHLQITLVTNLARAVDTLREHGYWIVALEPGPNA 185 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 +L+++ + L L++GAEG G+ + + D + IPM G + SLN +VA I L+E V Sbjct: 186 QSLFRAPLPLPLVLLVGAEGHGLSPVLLKRADVQVIIPMLGQIESLNAAVAGSIALYEIV 245 Query: 240 RQ 241 R+ Sbjct: 246 RR 247 >UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PR4_SPICI Length = 244 Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 5/235 (2%) Query: 5 IYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 IYGI+ V L + ++++L +G+ + L L + + + V L + S Sbjct: 7 IYGINPVVESLLNPAVKINKLYLLPQGKNNDYYLKLAKSRQLKVVFCSAVEMTTLVQTSK 66 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQ +I + + Y + PFLL+LD ++DPHN GA LR+ D V Sbjct: 67 ---HQSLILEICKPQNYSLASITTKALQNKHPFLLVLDQISDPHNFGAILRTCDLFNVDG 123 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA-GEADHTL 182 VI+ R +NAT K + GA VP+ RV NL + L+++ WI T+ + Sbjct: 124 VIILDKRQVDINATVAKTSAGAFNYVPVCRVNNLTNAIEYLKKQGFWIYATSLNTKAQNV 183 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 + K + L++G EG G+ +H D I IP AG + SLNVSVA+ I +++ Sbjct: 184 SELKYDIPICLIVGNEGTGISAKLLKHADFNIYIPTAGHLDSLNVSVASAILIYQ 238 >UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT15_9FIRM Length = 234 Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 69/198 (34%), Positives = 112/198 (56%), Gaps = 3/198 (1%) Query: 44 ESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQE-NDLPDLIASLDQPFLLILDG 102 + + V+I ++ LD+ + G HQG++A V G +Y++ +L D + LLILD Sbjct: 39 KEKKVLISSLSKDRLDKMAPGKNHQGVVALV-SGYEYKDFQELLDENKDKKEFRLLILDK 97 Query: 103 VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMR 162 + DPHNLGA RSA +I+PK R A +N T K + GA ++V + +VTNL++T+ Sbjct: 98 MEDPHNLGAIARSALFFNFDGIIIPKHREALVNDTVYKTSQGAVDNVNICQVTNLSQTIE 157 Query: 163 MLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSV 222 L++ WI E D+ + +G++A+++G EG+G+ + D + IP Sbjct: 158 KLKKAGFWIYAALLEGDN-IKDVDFSGKVAIIIGNEGKGISDNLIKASDFKVKIPNLSEF 216 Query: 223 SSLNVSVATGICLFEAVR 240 SLN SVA GI ++E +R Sbjct: 217 DSLNASVAAGIIMYEVIR 234 >UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma RepID=D1J7J9_MYCHP Length = 230 Score = 119 bits (298), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 76/246 (30%), Positives = 132/246 (53%), Gaps = 20/246 (8%) Query: 1 MSEMIYGIHAVQALLERAPERF--QEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 M ++++G ++V LE F +E+++ KG + + L+ + VV +R L Sbjct: 1 MKKIVFGKNSV---LEAIEYEFPIEEIYLQKGLVN-------NNLKFKKVV--YLDRNSL 48 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 D+ ++ HQG A++K +Q +DL + +LILD + DP N GA +RSA+ Sbjct: 49 DKLTENGNHQGYAAKLK---DFQYHDLGSIFKDGSDK-VLILDHIQDPQNFGAIIRSANV 104 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA-GE 177 G +I+PKDR+ + + K + G ++V +I+V +L + L+ + WI +A + Sbjct: 105 FGFKHIIIPKDRACDVTPSVLKTSSGGFKNVKVIKVNSLFDAIEELKNKGFWIYASALNQ 164 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM-AGSVSSLNVSVATGICLF 236 L +K ++A+++G EG G+ + +H DE+I I SV SLNVSVATGI L+ Sbjct: 165 QAKKLNDAKFNEKIAIIVGNEGSGVSKTLLKHSDEIIYIEQDKESVQSLNVSVATGILLY 224 Query: 237 EAVRQR 242 ++ Sbjct: 225 TVFNKK 230 >UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 Tax=Aquificales RepID=B4U792_HYDS0 Length = 251 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 119/217 (54%), Gaps = 4/217 (1%) Query: 27 ILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLP 86 IL + K L+ + +G+ +Q+A RQ L+E ++ QG++A + P E +L Sbjct: 30 ILIAHDSKAPKELLDLAKERGIKVQIAPRQKLEELANTKKTQGVVAILSPITYVPEEELF 89 Query: 87 DLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAA 146 ++ F ++LD +TDP N+G+ R+ + G +++PKDRSA +NA K + GA Sbjct: 90 RKTIE-EKGFFVVLDHITDPQNVGSIARTVEVFGGIGLLIPKDRSAPINAVVVKSSSGAI 148 Query: 147 ESVPLIRVTNLARTMRMLQEENIWIVG-TAGEADHTLYQSKMTGRLALVMGAEGEGMRRL 205 + + + ++++ ++ +E W+ G D T + + +V+G+EGEG+ + Sbjct: 149 FHLKISKTPSISKAIKTFKEMGGWVYALEKGGKDIT--KVDFAYPMCIVLGSEGEGVSKN 206 Query: 206 TREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 EH D +SIPM G V+SLNVS A ICL+E + + Sbjct: 207 VLEHSDVRVSIPMKGKVTSLNVSAAGAICLWEVYKNQ 243 >UniRef50_Q3BPZ8 tRNA/rRNA methyltransferase n=13 Tax=Xanthomonadaceae RepID=Q3BPZ8_XANC5 Length = 390 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 85/244 (34%), Positives = 132/244 (54%), Gaps = 22/244 (9%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQY----LDE 60 +YGI+AVQA+ + P+ +++++ + R +P AL + V ++ R L + Sbjct: 150 LYGINAVQAVFKARPQALRKLYLSEAR-----IPQFKALLAWCVTQRIGYRVVDEADLSK 204 Query: 61 KSDGAVHQGIIA---RVKPGRQYQENDLPDLIASLDQ-PFL-LILDGVTDPHNLGACLRS 115 + A H+GI+A RV P L + +A+L Q P L L LDGV +PHN GA LRS Sbjct: 205 LAASAHHEGIVAEVLRVAP------QPLQEWLAALPQGPVLALWLDGVGNPHNFGAILRS 258 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 + GV +++P + L+ A +VA G AE+VPL+++ + A M L++ I T Sbjct: 259 SAHFGVAGLLLPAGSTLGLSGAAARVAEGGAEAVPLVQLPDTATAMAQLRQAGFAIAATL 318 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + ++ + + RL VMGAE EGM R CD +SI +G V SLNV+ AT + Sbjct: 319 VDGGQDVFAAALPQRLVYVMGAESEGMDRAFARDCDLQLSIRGSGKVESLNVASATAV-- 376 Query: 236 FEAV 239 F+A Sbjct: 377 FQAA 380 >UniRef50_Q6UCQ6 Predicted tRNA/rRNA methyltransferase n=2 Tax=Bacteria RepID=Q6UCQ6_9PROT Length = 257 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 73/235 (31%), Positives = 122/235 (51%), Gaps = 8/235 (3%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 IYG HAV L EV+ +K+L I LE+ V+ R +D G Sbjct: 19 IYGHHAVVGALMNENRVKYEVY-FTSEAEKKLKNEIK-LENINVISIKKTRDEIDLLLKG 76 Query: 65 -AVHQGIIARVKPGRQYQENDLPDLIASLDQ--PFLLILDGVTDPHNLGACLRSADAAGV 121 + HQGI RV+ + Q L D I +L++ + +LD + DP N+GA RSA A + Sbjct: 77 ISNHQGICMRVE---KLQTPKLSDFINNLNEERSIIFLLDQLDDPQNVGAIFRSALAFNI 133 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +I+ S N+ K A A + VP I++ N++ +++L++ WI G +A+ + Sbjct: 134 DGIILTNTNSVTENSFLAKTASSALDKVPFIKIQNISSCIKILKDSGYWIYGLDMKAERS 193 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + ++ ++ ++G+E +GMR++T CDE + I M+ ++ SLNVS I +F Sbjct: 194 ITETTFPKKIVFILGSESKGMRKITDSLCDEGLKIKMSDNLESLNVSNTAAIIMF 248 >UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Tax=Bacteroidetes RepID=Q11YB9_CYTH3 Length = 268 Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 80/241 (33%), Positives = 125/241 (51%), Gaps = 3/241 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +MI+GI V LE E ++ I + E + L V + + LD + Sbjct: 24 DMIFGIRPVIEALEAGKE-IDKILIQRNIEQAVVQELFELANRVKVPVIKVPVEKLDRVT 82 Query: 63 DGAVHQGIIARVKP-GRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 HQG+I + +N + S P L++LD VTD N GA RSA+ GV Sbjct: 83 RKN-HQGVICYLSAINFASLDNIVSACFESGKNPLLVMLDRVTDVRNFGAVARSAECLGV 141 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 A+IVP +AQLN+ A K + GA +P+ RV +L T++ L++ + I+ + +A Sbjct: 142 DAMIVPSRGAAQLNSDAVKTSAGALYHIPVCRVDHLIDTVKYLKQCGLRIIACSEKASIN 201 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +Y +T ++MG+E +G+ + D ++IPM+G ++SLNVSVATG+ L E RQ Sbjct: 202 VYDEDLTDPCVILMGSEEDGISMDLLRYADAHVTIPMSGHINSLNVSVATGMILSEVTRQ 261 Query: 242 R 242 R Sbjct: 262 R 262 >UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacterium RepID=D0JB44_BLASB Length = 253 Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 74/244 (30%), Positives = 122/244 (50%), Gaps = 7/244 (2%) Query: 3 EMIYGIHA-VQALLERAPERFQEVFILKG--REDKRLLPLIHALESQGVVIQLANRQYLD 59 E++YGI ++A+ R+ + ++F +G + LI + + + IQ +Q Sbjct: 5 EIVYGIRPLIEAI--RSKKTISKLFFQRGFRKISNAYKELISLSKKENIPIQTVPKQKFY 62 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 + + HQG+ A + P YQ DL P P L+ILD +TD N G+ +R++ Sbjct: 63 QLKNKN-HQGVFAILSPIETYQIKDLLPVFYEKGKNPLLVILDRITDVRNFGSIIRTSAC 121 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G A+I+PK +A + + + K + GA VP+ + N+ T+ L + IV ++ Sbjct: 122 VGADAIIIPKKYTAMIGSDSIKTSSGALFKVPICQEKNIKNTIEFLMNSGLKIVSATEKS 181 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + Y +G AL++G E +G+ E E IP +SSLNVSVA G+ L+E Sbjct: 182 NIYWYNIDFSGPTALILGNEEKGISPKYLEISCEKAKIPAIKGISSLNVSVACGVILYEV 241 Query: 239 VRQR 242 RQR Sbjct: 242 FRQR 245 >UniRef50_C7M1Q7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1Q7_ACIFD Length = 251 Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 72/198 (36%), Positives = 106/198 (53%), Gaps = 7/198 (3%) Query: 47 GVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDP 106 GV ++L + + + VHQG++A P + L D L+++D + DP Sbjct: 58 GVPVELLPPERFERVARTEVHQGVLADCDPVVDVGLDGL------ADGSLLVVVDHLEDP 111 Query: 107 HNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQE 166 HNLGA LRSA A G V++P+ RS L T KVA G E + V+++ +R L+ Sbjct: 112 HNLGAVLRSAAAFGADGVVLPRYRSVPLTPTVTKVAAGGVEWLRFALVSSIPAALRRLRA 171 Query: 167 ENIWIVGTAGEADHTLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSL 225 +W VG +A +++ + T RLALV+GAEG G+ L R D +IP+A +V+SL Sbjct: 172 RGVWSVGLDADAATSVFSLTLATERLALVVGAEGRGLAPLVRRGVDVTAAIPLAATVASL 231 Query: 226 NVSVATGICLFEAVRQRS 243 N SVA I L V R+ Sbjct: 232 NASVAASIALAAIVDART 249 >UniRef50_A3EV98 Putative TRNA/rRNA methyltransferase (SpoU) n=2 Tax=Leptospirillum sp. Group II RepID=A3EV98_9BACT Length = 192 Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 103/187 (55%), Gaps = 2/187 (1%) Query: 50 IQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNL 109 + R LD + VHQG+ A + P + D L P L+ +DGV DP NL Sbjct: 1 MDFVPRASLDRMAPDLVHQGVYASLLPLPLLDLGEFLDGKDPLPSP-LVAVDGVQDPRNL 59 Query: 110 GACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI 169 GA LR+ DAAGV V++PK R A L+ K + GA ++PLIRV NL++++ L++ Sbjct: 60 GALLRTCDAAGVQGVLLPKRRVAPLSPVCAKTSSGALFTIPLIRVGNLSQSLMYLRKRG- 118 Query: 170 WIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSV 229 + V + T Y+ L +V+G E +G+ R + D +S+PM G VSSLN+SV Sbjct: 119 YGVASLALGGSTAYRDPFPAPLVVVVGEEEKGVSRPVLQQSDWKVSLPMRGKVSSLNLSV 178 Query: 230 ATGICLF 236 A GI L+ Sbjct: 179 ALGIFLY 185 >UniRef50_C4XN87 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XN87_DESMR Length = 237 Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 77/225 (34%), Positives = 122/225 (54%), Gaps = 6/225 (2%) Query: 14 LLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIAR 73 L+E++P+ +V + +G + ++ A E+ GV + +D G HQG++AR Sbjct: 4 LVEQSPKSVDDVLLRQGLRGADVDAIVRACEAAGVRYRFMPGLDMDRLYPGN-HQGVMAR 62 Query: 74 VKPGRQYQENDLPDLIASLDQPF--LLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRS 131 + G D+ L A LD P +L+LD V DP N+GA +R+ A G ++VPK Sbjct: 63 LAAGPLVSLEDV--LAAGLDAPLQVILVLDRVQDPGNVGALVRTLYALGGGGILVPKHEG 120 Query: 132 AQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD-HTLYQSKMTGR 190 A+L A K + G +PL +VTNL++ + +E ++G AGE + ++ +K Sbjct: 121 ARLGPGAAKASAGTLARLPLAKVTNLSQALDAAKEAGYTVIGAAGEEEAQNVHLAKPPFP 180 Query: 191 LALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 LALV+G+E EG+R R+ CD L IP A + SLNV+ A I + Sbjct: 181 LALVLGSEEEGIRPGIRKRCDALWRIPQARPIDSLNVAQAGAIMM 225 >UniRef50_C6V4C7 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Neorickettsia RepID=C6V4C7_NEORI Length = 243 Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 74/238 (31%), Positives = 123/238 (51%), Gaps = 10/238 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRL-LPLIHALESQGVVIQLANRQYLDEKS 62 +I+G HA A ++ +FI RE K + LPL+ + N Q Sbjct: 7 VIFGKHAAVAAIKNPERNILSIFI--AREKKAVYLPLLERSRLPNISF-CENTQIAKICG 63 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAAGV 121 A+HQGI + + + +L D++ + ++ ++ILD +TDP N+G LRS+ A GV Sbjct: 64 RDALHQGIAVITE---KLSQPELRDVLKNTNKRSLVMILDSITDPFNVGNILRSSKAFGV 120 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 A++V + S + K A GA ES+P+ + NL +++LQE + G A Sbjct: 121 DAIVVKQRHSPSETSVIAKTASGALESIPVCTIANLTNAIKILQENGYFCYAMDGGASSK 180 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAG--SVSSLNVSVATGICLFE 237 L + + ++A V+G+EG+G+ L + CD+ +SIPM + S+NVS A I +F+ Sbjct: 181 LTEIRFPNKVAFVLGSEGKGISHLLKTRCDQTLSIPMYADKNFDSINVSNAAAIAMFK 238 >UniRef50_C1QAT9 rRNA methylase, putative, group 3 n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QAT9_9SPIR Length = 237 Score = 116 bits (290), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 71/230 (30%), Positives = 119/230 (51%), Gaps = 3/230 (1%) Query: 8 IHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVH 67 I + A+ E + E +K KR +I E + V+I+ ++ + EK G V+ Sbjct: 3 ITSKNAITEAISKNLVETLYIKFPISKREKDIIKLAEKKKVLIKNVDKNEM-EKIVGKVY 61 Query: 68 QGIIARVKPGRQYQ-ENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 I A +K + EN L + D P + ILD +TD HNLGA +R+A G +I+ Sbjct: 62 S-IAADIKENAEIGIENFLQKALEKKDNPLIFILDSITDVHNLGAIIRNAYFFGSSGIII 120 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 PKD SA +N +++ GAA +P+ TNL RT+ +++++ WI + E + +L K Sbjct: 121 PKDNSAPINEKVYEISAGAAYHLPISIETNLNRTIELMKDKGFWIYYASEEGETSLEDFK 180 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 A+++G E G+R + +++ D I I + SLNVS A+ + + Sbjct: 181 FNTPTAIILGNEHSGVRDILKKNSDGSIIINKSNDFDSLNVSAASAVIAY 230 >UniRef50_A9M5R9 RNA methyltransferase, TrmH family, group 3 n=39 Tax=Alphaproteobacteria RepID=A9M5R9_BRUC2 Length = 286 Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 81/239 (33%), Positives = 125/239 (52%), Gaps = 14/239 (5%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVV--IQLANRQYLDEKS 62 +YG+H V+A +E P+R IL+ R + + E+ + +++ + + +D+++ Sbjct: 54 LYGLHTVRAAVEN-PQRK----ILRMRATRNGFARLEIGEADSLPFPVEIVDPRDIDKET 108 Query: 63 DG-AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 AVHQG++ +P R + ++L + P LL+LD VTDPHN+GA +RSA A G Sbjct: 109 GSEAVHQGVMIEAEPLRTRKLSEL------RESPLLLVLDQVTDPHNVGAIMRSAVAFGA 162 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 A+I S Q K A GA E + I V NLA + L +G + Sbjct: 163 GALITTSRHSPQETGVLAKAASGALELIAHIEVRNLAEAIEELHTLGFQTIGLDSQGPLE 222 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + + R+ALV+GAEG+G+R+ TRE L + M G + SLNVS A I L+ A R Sbjct: 223 MEATLSGNRIALVLGAEGKGLRQKTRETVTALARLDMPGEIKSLNVSNAAAISLYAAER 281 >UniRef50_Q0ANM8 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Hyphomonadaceae RepID=Q0ANM8_MARMM Length = 289 Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 91/236 (38%), Positives = 123/236 (52%), Gaps = 23/236 (9%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILK-GREDKRLLPLIHALESQGVVIQLANRQYLDE 60 S I+G HAV A + + +E+ LK R R LP G Q + +D Sbjct: 45 SGWIWGRHAVLAAVA---NKRREILELKVTRNAARDLP-------DGTDHQQVEPKVIDN 94 Query: 61 K-SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 +GAVHQG AR + N + D LL+LD +TDPHN+GA LRSA A Sbjct: 95 ALPEGAVHQGFAARARALPSESVNGVIDPTHGA----LLVLDQITDPHNVGAVLRSAAAF 150 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G+ AVI+ ++ L T K A GAAE V +RVTN+A T+ + ++G AGEA+ Sbjct: 151 GIRAVIMQDRKAPPLFGTVCKSAVGAAERVAHVRVTNIADTLLEFSKAGRHVLGLAGEAE 210 Query: 180 HTLYQS------KMTGR-LALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVS 228 L + K G L LVMG+E +G+R+ E CD+L+ IPM +V SLNVS Sbjct: 211 LDLATALAAPDGKGWGPGLVLVMGSEDKGLRQRVAECCDQLVRIPMTDTVESLNVS 266 >UniRef50_B3S0S7 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S0S7_TRIAD Length = 267 Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 78/259 (30%), Positives = 131/259 (50%), Gaps = 31/259 (11%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKG----REDKRLLPLIHALESQGVVIQLANRQYL 58 E+IYGI Q L+ + +++ + +K + +I G+ + ++++YL Sbjct: 8 EIIYGIAPCQLALKADRRKIYHIYVRDPAGTLKPNKSIEHIIFKARKLGIHVLPSDKRYL 67 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLI---------ASLDQPFLLILDGVTDPHNL 109 D+ ++G HQG+ + P R P+LI A+ + L L+ V DP NL Sbjct: 68 DKLTEGRPHQGVAMKATPLR-------PNLIRHDLDKTAMANNRKALWLGLNDVQDPMNL 120 Query: 110 GACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI 169 GA +R+A GV+ V+V ++A+L+A K + GA E P+ V NL++ + L E + Sbjct: 121 GALIRTAALMGVNRVVVNSRKTARLSAVVSKASAGAMEVYPIYAVKNLSKYLDYLVENDW 180 Query: 170 WIVGTAGEADHTLYQS------KMTGRLALVM-GAEGEGMRRLTREHCDELISIPMAGS- 221 I+GT G + YQ+ G+ ++M G EG G+ +E C+ ++IP + S Sbjct: 181 NIIGTVGHKEVNQYQAMSCQNFNHNGKPTILMLGNEGFGISASIKEKCNSFLTIPTSSSC 240 Query: 222 ---VSSLNVSVATGICLFE 237 + SLNVSVA GI L+ Sbjct: 241 PPDIDSLNVSVAAGILLYS 259 >UniRef50_Q4A787 TRNA/rRNA methyltransferase n=4 Tax=Mycoplasma RepID=Q4A787_MYCH7 Length = 233 Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 68/217 (31%), Positives = 118/217 (54%), Gaps = 17/217 (7%) Query: 22 FQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQ 81 F+E+++LK D+ L Q V ++ +R +LD K HQG + ++ + ++ Sbjct: 21 FKEIYLLKPTNDQIFL-------KQKV--KIVSRDFLD-KLVSLNHQGFVGVLENFKFFE 70 Query: 82 ENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKK 140 + L D+P +LILD + D +NLG +R+A+ G+ +I+PK R+A+LN T K Sbjct: 71 IDTLVK-----DKPKIILILDHIQDQNNLGNIIRTANCFGIKHIILPKKRAAKLNETTMK 125 Query: 141 VACGAAESVPLIRVTNLARTMRMLQEENIWIVGT-AGEADHTLYQSKMTGRLALVMGAEG 199 V+ G + I V ++ + L+E + WI T E + + + A+++G E Sbjct: 126 VSSGGFVGLKFILVNSIVSAINKLKEMDFWIYATDLKEKSRKIQEIQFNYPCAIILGNEA 185 Query: 200 EGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 G+++ + D+ IP+ G+V+SLNV+VATGI LF Sbjct: 186 TGIKKSSLNASDQTFFIPLEGTVNSLNVTVATGIILF 222 >UniRef50_Q4A651 Putative tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A651_MYCS5 Length = 233 Score = 113 bits (283), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 105/182 (57%), Gaps = 8/182 (4%) Query: 58 LDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSA 116 L + ++ A HQG +A + + +D+ + S +P +L+LD + D +NLGA +RSA Sbjct: 51 LSKLTNNANHQGFVAEL----DFTYSDINKIYES--KPKIVLVLDHIMDTYNLGAIIRSA 104 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 +AAG+ +++PK+ A + + KV+ G + +V++L + L++ + WI G+ Sbjct: 105 NAAGIKDIVMPKENCADITSNVLKVSSGGFIGINFYKVSSLNAFLNKLKKHSYWIYGSML 164 Query: 177 EADHTLYQS-KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + + T Y S K +A ++G E +G+ + DE I IP +GSV SLNVSVA GI L Sbjct: 165 DKNSTSYYSAKYNFPMAFILGNEEKGISKSALVEVDEKIHIPQSGSVESLNVSVAAGILL 224 Query: 236 FE 237 F+ Sbjct: 225 FD 226 >UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C1_9ACTN Length = 372 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 63/243 (25%), Positives = 111/243 (45%), Gaps = 43/243 (17%) Query: 39 LIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ---- 94 LI +G+ + + +D S HQG++ P + + D++A++D+ Sbjct: 128 LITCARERGIACEYVKKSAMDSLSSHGAHQGVMFEAAP---FAYAEFGDVLAAIDRKGAR 184 Query: 95 ------------------------------------PFLLILDGVTDPHNLGACLRSADA 118 +++LD V D N GA +RSA+ Sbjct: 185 ATDASAADASAADASAADAHELVTNTDNQTAAHKQASLVVLLDHVVDEGNFGAIVRSAEV 244 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G VI+ R A + A K + GA +P+++V NLAR + L+E W++G + A Sbjct: 245 VGASCVIIANARCASVGVGAYKTSAGAVLHMPIVQVVNLARAIDELKEHGFWVIGASEHA 304 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 T++ + TG++ L+MG+E G+ L ++ CD + +P G + SLNV+ A + +E Sbjct: 305 QQTVWDAPFTGKVCLIMGSEENGISSLVQKKCDFICKLPQRGRIESLNVAQAATVMCYEW 364 Query: 239 VRQ 241 +RQ Sbjct: 365 MRQ 367 >UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15 Tax=Ureaplasma RepID=B1AIB3_UREP2 Length = 239 Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 4/200 (2%) Query: 39 LIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPD---LIASLDQP 95 LI+ + + ++ N + + HQ I ++ + +Q+ L LI Sbjct: 32 LINLINKNKITYEIVNEAWFKQFDHSLNHQNIAFKL-VKKNFQKTSLESFLKLIKDKKNA 90 Query: 96 FLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVT 155 +LILD + DP N GA +R+A+ GV A+I K A +N K + GA + +I V Sbjct: 91 LVLILDEIEDPRNFGAIIRTANGFGVDAIIYKKHHQASINDLVIKTSMGAINYIYMIEVN 150 Query: 156 NLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELIS 215 NL+ T++ LQ+E W+ T+ + + ++G E +G+ L ++ D+ I Sbjct: 151 NLSNTIKNLQDEGFWVYATSLLKSQPYEKVDYANKTVFIVGNENKGVSPLILKNADQSIR 210 Query: 216 IPMAGSVSSLNVSVATGICL 235 I M G V SLNV VATGI L Sbjct: 211 IDMFGDVQSLNVGVATGIIL 230 >UniRef50_C6HZU7 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZU7_9BACT Length = 259 Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 22/258 (8%) Query: 7 GIHAVQALLERAPERFQEVFILKGRE-----DKRLLPLIHALESQGVVIQ---------L 52 G H V +L P+ +++ + R D R +I S+G+ + L Sbjct: 3 GFHPVMEVLSLRPDSVVHLYLREDRHGESRMDGRRREIIRVARSRGIPVDFLPGPAIDGL 62 Query: 53 ANRQYLDEKSDGAV------HQGIIARVKPGRQYQE-NDLPDLIASLDQPFLLILDGVTD 105 +R + + G HQG++AR++ + +D + + L+ +DGV D Sbjct: 63 FHRGQVSATASGGTGKGLPSHQGVVARIEEVATFPNLDDFLEASPGIAPSPLVAVDGVQD 122 Query: 106 PHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQ 165 P NLGA LR+ DAAGV V++P+ R A L+ T K + GA ++PL+R+ NL+ ++R L+ Sbjct: 123 PRNLGALLRTCDAAGVGGVLIPRRRVAPLSQTVAKTSAGALFTLPLVRIGNLSGSLRQLK 182 Query: 166 EENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSL 225 +E I D + LV+GAE +G+ R + D +PM G V SL Sbjct: 183 KEGYAIAALDLSGDPLPEGPLPGPLV-LVVGAEEKGVTRPVLDLADWRFRLPMKGKVQSL 241 Query: 226 NVSVATGICLFEAVRQRS 243 N+SVA GI L+ + S Sbjct: 242 NLSVAAGIFLYRQISGSS 259 >UniRef50_B3PW50 23S rRNA (Guanosine-2'-O-)-methyltransferase n=25 Tax=Rhizobiales RepID=B3PW50_RHIE6 Length = 296 Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 81/227 (35%), Positives = 117/227 (51%), Gaps = 15/227 (6%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK-SD 63 +YG+H V+A L+ PER + + RL I L G+ ++ +D+ Sbjct: 66 LYGLHTVRAALDN-PERKKIKLSVTQNALARLEIDIEPL---GIPFEIVAPHEIDKVLGP 121 Query: 64 GAVHQGIIARVKPGRQYQENDLP--DLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 A+HQG++ +P LP L A D P LL+LD VTDPHN+GA +RSA A Sbjct: 122 EAIHQGVMLETRP--------LPVRRLEALKDSPLLLVLDQVTDPHNVGAIMRSAVAFNA 173 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AVI + S + K A GA E +P I++TNLA + L + +G E Sbjct: 174 GAVITTQRHSPTESGVLAKSASGALELIPYIQITNLADALGELHKLGFSTIGLDSEGPAP 233 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVS 228 L + +LALV+G+EG+G+R+ TRE L + M G++ SLNVS Sbjct: 234 LEGTFSGDKLALVLGSEGKGLRQKTRETVTALARLDMPGAIKSLNVS 280 >UniRef50_Q2G8L5 RNA methyltransferase TrmH, group 3 n=9 Tax=Sphingomonadales RepID=Q2G8L5_NOVAD Length = 271 Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 80/132 (60%) Query: 97 LLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTN 156 +++LD VTDPHN+GA LRS A V A++ + + T K A GA E VP +RV N Sbjct: 125 IVVLDSVTDPHNVGAILRSCAAFDVAALVTQDRHAPPESGTLAKSASGALEIVPWVRVVN 184 Query: 157 LARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISI 216 L+R + + EE W +G G+ + +G +ALV+GAEGEG+R +HCD + + Sbjct: 185 LSRALERMSEEGYWRIGLDGDGKAVFPAALPSGPVALVLGAEGEGLRHNVAQHCDSIARL 244 Query: 217 PMAGSVSSLNVS 228 P+A ++ SLNVS Sbjct: 245 PIASAIESLNVS 256 >UniRef50_Q1MSB5 RRNA methylases n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MSB5_LAWIP Length = 290 Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 68/236 (28%), Positives = 121/236 (51%), Gaps = 12/236 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKG---REDKRLLPLIHALESQGVVI--QLANRQYL 58 ++ GI V L+E+ P++ +F+ KG +E +++L L + + ++ NR L Sbjct: 47 ILSGIKPVLDLIEKEPQKIDTIFLQKGLCSKEYQKVLDLCRQTNIRFIFTTSKVLNRFCL 106 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 HQGI+AR+ + DL D + P +++ D + DP N G +R+ + Sbjct: 107 TN------HQGIVARLFESGFIELEDLFDKVPDAPLPLIVVFDQIQDPGNAGTIIRTLYS 160 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G VI+PK L A++ A G E +P+ + NL+R + E+ I GT+ E Sbjct: 161 LGGAGVIIPKHNGVFLGQDARRAAVGCLERLPISKAINLSRAIETANEKGFHIYGTSIEK 220 Query: 179 D-HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGI 233 D ++++++ L++G+E G+R ++ C ++ IPM V+SLNV+ A GI Sbjct: 221 DSKNVFEAELKFPALLILGSEKSGIRLQLKKRCHTILHIPMVRDVNSLNVAQAGGI 276 >UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXH3_9BACT Length = 269 Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 70/177 (39%), Positives = 96/177 (54%), Gaps = 8/177 (4%) Query: 68 QGIIARVK-PGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 +G++A VK R + DLP+ P +++L+ V P NLGA LRSADA+ AVIV Sbjct: 98 EGMMAEVKVKNRTLADLDLPE------SPLIVVLESVEKPGNLGAVLRSADASKADAVIV 151 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 + N + + GA +VP + ++ A M L+E NI I+ + Y S Sbjct: 152 CNPLTDLFNPNLIRSSIGAIFTVPTVACSSQA-CMNFLKERNIKILTAQLQDSAPYYDSD 210 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 M G A+VMG E G+ R+ D I IPM G + SLNVSV+ I +FEAVRQRS Sbjct: 211 MRGGTAIVMGTESTGLTDAWRKAADAHIRIPMLGQLDSLNVSVSAAILMFEAVRQRS 267 >UniRef50_Q8EX27 rRNA methylase n=1 Tax=Mycoplasma penetrans RepID=Q8EX27_MYCPE Length = 238 Score = 109 bits (272), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 101/201 (50%), Gaps = 9/201 (4%) Query: 43 LESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASL-----DQPFL 97 +S+ + + N+++ D+ VHQ I+ K D I + D+ + Sbjct: 34 FKSKNIKLNKVNKKFFDKYE--VVHQNILGIAKESSLTIHTDFDSFIEKINNLNTDKKII 91 Query: 98 LILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNL 157 L+LD + DP N GA R++ + V +I K+ Q+N T K + G + ++V NL Sbjct: 92 LVLDEIQDPGNFGAICRTSKSFQVAGIIFKKNNQIQINETVIKTSLGTVNYLNFLKVNNL 151 Query: 158 ARTMRMLQEENIWIVGTA-GEADHTLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELIS 215 + + L++EN W V TA E L + K +L +++G E +G+ L ++ D ++ Sbjct: 152 SEVLNKLKKENYWTVCTALDEKSIPLSKFKTDINKLVVIVGNENKGVSELIKKDSDFIVK 211 Query: 216 IPMAGSVSSLNVSVATGICLF 236 I M SV SLNVSV+T I L+ Sbjct: 212 IEMDSSVQSLNVSVSTAIILY 232 >UniRef50_Q3CY16 RNA methyltransferase, TrmH family, group 3 (Fragment) n=1 Tax=Streptococcus agalactiae H36B RepID=Q3CY16_STRAG Length = 169 Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/112 (47%), Positives = 75/112 (66%), Gaps = 5/112 (4%) Query: 93 DQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLI 152 + P +LILDG+TDPHNLG+ LR+ADA V +I+PK RS + K + GA E VP+ Sbjct: 59 ENPLILILDGLTDPHNLGSILRTADATNVTGIIIPKHRSVGVTPVVSKTSTGAVEHVPIA 118 Query: 153 RVTNLARTMRMLQEENIWIVGT--AGEADHTLYQSKMTGRLALVMGAEGEGM 202 RVTNL++T+ L+++ WI GT G H + +K G+LALV+G EG+G+ Sbjct: 119 RVTNLSQTLDTLKDKEFWIFGTDMNGTPSHK-WNTK--GKLALVIGNEGKGI 167 >UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Mollicutes RepID=Q2ST10_MYCCT Length = 244 Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 122/236 (51%), Gaps = 7/236 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK- 61 +IYG H + LL++ +E+++ ++ +LL L++ + I + + LD+ Sbjct: 4 NLIYGKHVIYELLKKHKNMVKEIWV----KNLKLLDEFD-LKNTKIKINVVSENKLDQLL 58 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 +HQGIIA++K ++L + + + ++ +L+LD + DP+N GA +RS V Sbjct: 59 KTNELHQGIIAQIKDFNYTPFDELLNDLNTKEKSLVLVLDQIHDPYNFGAIIRSCSLLNV 118 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +I+ + Q+N+T K + G+A + + + NL +++L+ WI T + T Sbjct: 119 DGIIILDKKQVQVNSTVLKTSSGSAFDIKISKTNNLNNAIKILKNNGFWIYATNLNQNST 178 Query: 182 -LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + +++ + +++G E +G+ L ++ D I +P ++ S N SVA I F Sbjct: 179 DMTKTQFANKSVVIIGNEQKGVSELLTKNSDFNIYVPSNKNIDSFNASVACSIICF 234 >UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2REE3_ARCPR Length = 232 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 72/237 (30%), Positives = 126/237 (53%), Gaps = 11/237 (4%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 + GI+ V L+ + ++F+LK + R+ ++ AL + + + Q E Sbjct: 3 VMGINGVMEALKSG--KVNKIFVLKDATNPRIKEIV-ALAKKKKIPVVYTPQLPKE---- 55 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAV 124 +G++A + P +Y+E D + F+L LD V DP N+GA +RSA+ G V Sbjct: 56 --ARGVMAEISP-IEYKEVDTIIDKCIREGSFILFLDSVEDPQNMGAIMRSAEFFGCAGV 112 Query: 125 IVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQ 184 ++PK R Q+N T KV+ GA + + RV NLA ++ L++ I +VG + + L Sbjct: 113 VIPKRRCVQVNETVAKVSAGAVFHLDIARVENLANILKKLKKFGITVVGADLDGE-PLRN 171 Query: 185 SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 ++ LA+V+G E +G+ + ++ CD + I G ++SLN+SVA I ++E R+ Sbjct: 172 VDLSPPLAIVVGGEDKGLSKPVKKQCDFIAKIEGYGKINSLNLSVAGAIIMYEFRRR 228 >UniRef50_B2IK44 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Beijerinckiaceae RepID=B2IK44_BEII9 Length = 293 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/172 (38%), Positives = 93/172 (54%), Gaps = 9/172 (5%) Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 VHQG++ +P ++P +L+LD +TDPHN+GA +R+A A V A++ Sbjct: 123 VHQGVLLEARPLEPLDITEIPTRSG-----VVLVLDQITDPHNVGAIVRTAAAFDVDAIV 177 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVG--TAGEADHTLY 183 + + L K A G E V ++ V NLAR + L N VG +A EAD T Sbjct: 178 TTERHAPALGGVLAKAASGGLEHVQIVPVVNLARALETLGRLNYLRVGLDSAAEADFT-- 235 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 Q + +ALV+G EG G+RRLTRE CD L + M G + SLNVS A + L Sbjct: 236 QLPLQRPIALVLGGEGTGLRRLTREKCDFLARLDMPGKIKSLNVSNACAVVL 287 >UniRef50_D0RNL1 SpoU rRNA Methylase family n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNL1_9RICK Length = 242 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/169 (30%), Positives = 94/169 (55%), Gaps = 2/169 (1%) Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 HQG ++K + +Q ++L I D+ ++IL+ V D N+G+ +RS A V +IV Sbjct: 69 HQGYAVKIKERKTFQFSELRKNIIKYDE--IIILNNVFDDRNIGSIIRSCVAFDVKCLIV 126 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 K+ + K A G E + + V+NL +++LQ+ W+ GE++ ++ K Sbjct: 127 EKNNFRAGSELMNKSASGGMEYIDIYLVSNLNNVIKVLQQNAYWVYSLDGESNKNIFDIK 186 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + A + G+EG+G++ L +++ DE+ISIP+ + SLN+S + I L Sbjct: 187 FNKKSAFIFGSEGDGIKSLVKKNSDEIISIPINKKIESLNLSNSVSIVL 235 >UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitutaceae RepID=B1ZVF9_OPITP Length = 296 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/149 (40%), Positives = 86/149 (57%), Gaps = 1/149 (0%) Query: 95 PFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRV 154 PF+L+++ + P NLG LRSADAAG AVIV + N + + G SVPL+ V Sbjct: 148 PFILVVEAIEKPGNLGTILRSADAAGCDAVIVCDPVTDIFNPNVVRASTGVLFSVPLV-V 206 Query: 155 TNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELI 214 A + L+ + + + T A+ + + G LA+VMG+E G+ ++CD + Sbjct: 207 AESAPVLAWLRAQGVRTIATTPAAEKLYTDADLRGPLAIVMGSEQYGLSEFWLKNCDLPV 266 Query: 215 SIPMAGSVSSLNVSVATGICLFEAVRQRS 243 IPMAG SLNV++AT I LFEAVRQR+ Sbjct: 267 RIPMAGQADSLNVAMATIITLFEAVRQRA 295 >UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMU7_9BACT Length = 273 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/175 (37%), Positives = 96/175 (54%), Gaps = 6/175 (3%) Query: 68 QGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVP 127 +G++A +K Q N D + D PFLLI++ + P NLG LRSADAAGV AVI Sbjct: 98 EGLLAVIK-----QWNHTLDDLQLSDPPFLLIVEAIEKPGNLGTILRSADAAGVDAVICC 152 Query: 128 KDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKM 187 + N A + + G S+P + ++ ++ ++++ I + T D + + Sbjct: 153 DSVTDLFNPNAVRSSTGVLFSMPTVTASS-DEVIKWIRQKGIRTIATTPHTDILYTDTDL 211 Query: 188 TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 G LA+VMG+E G+ CD + IPMAG SLNV++AT I LFEAVRQR Sbjct: 212 RGPLAIVMGSEQFGLSEKWLSACDTKVLIPMAGQADSLNVAMATLITLFEAVRQR 266 >UniRef50_C6BUS0 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Desulfovibrionales RepID=C6BUS0_DESAD Length = 251 Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 2/241 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + +I G VQ LL +PER +++ KGR+DK I + G+ ++A++ L Sbjct: 10 NTIIAGRKPVQELLLDSPERIDLLYLQKGRQDKNFERTIQRCKKYGIKYKIADKAELGRV 69 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 G HQG+IARV +D+ + +A P L++LD V DP N+G RS A G Sbjct: 70 FSGN-HQGVIARVAALPFADFDDMLENLADSPLPLLVVLDQVQDPGNVGVLARSLYALGG 128 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD-H 180 ++ K A L A K + GA +P+ RV N+++ + + I I G + D Sbjct: 129 AGIVTAKHGGAFLGPAAVKASAGALNKLPVARVNNISQALDKAIDMGINIYGAGLDDDSS 188 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + Y +++ LV+G E +G+R + C +LI IP SLNV+ A + + E R Sbjct: 189 SAYTAEIHTPAILVLGNEEKGIRFNVEKRCQKLIHIPFRRDFDSLNVAQAGAMLISEFAR 248 Query: 241 Q 241 + Sbjct: 249 R 249 >UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV4_9PLAN Length = 261 Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 6/208 (2%) Query: 40 IHALESQG----VVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP 95 I LE Q + + ++ + L +K + HQG+IA++ P Y +L + + P Sbjct: 54 IEQLEQQAARSTIPVFISTDKELTQKCRASDHQGMIAKMAP-FPYTSIELFNQ-QEITSP 111 Query: 96 FLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVT 155 LILD + DP N GA +RSA+ G + ++ + + + GA VPL++ T Sbjct: 112 LFLILDRIQDPFNFGAIIRSAEIMGADGIFSGTHEQCEVTSLVCRTSAGAVNHVPLVQAT 171 Query: 156 NLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELIS 215 +L R ++ I IVGTA +A L A+++G EG G+ + C L+ Sbjct: 172 DLVSLCRDWKQNGINIVGTAMQASEKLNDYNFQQPTAVIVGNEGTGISPELQAECTHLVR 231 Query: 216 IPMAGSVSSLNVSVATGICLFEAVRQRS 243 IP G SLNV+V+ I L+EA RQR+ Sbjct: 232 IPQQGKTESLNVAVSASILLYEASRQRN 259 >UniRef50_B0S8U9 tRNA (Guanosine-2'-O-)-methyltransferase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0S8U9_LEPBA Length = 257 Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 78/252 (30%), Positives = 131/252 (51%), Gaps = 28/252 (11%) Query: 3 EMIYG----IHAVQALLERAPER----FQEVFILKG--REDKRLLPLIHALESQGVVIQL 52 E+++G +++L + APER +EV + G E+K+ I A V Sbjct: 7 EILFGKRNFFEFLESLEQMAPERGIKTIREVIVKDGIGNEEKQR---IKAYLPNSVKFTT 63 Query: 53 ANRQYLDEKSDGAVHQG-IIARVKPG-------RQYQENDLPDLIASLDQPFLLILDGVT 104 + + LD + HQG +I R K Q+++N P+ + P +LILD + Sbjct: 64 VSARELDRIAQDKNHQGYVIIRTKQKSYLSLGFEQFKQNIKPN-----EGP-VLILDRIQ 117 Query: 105 DPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRML 164 DP NLG LR+A+ GV V++ ++ + +KV+ GA + + RV NL + L Sbjct: 118 DPGNLGNLLRTAECMGVKHVLMSDRDTSPITPVVEKVSAGAIHHIQIYRVANLKHGIDFL 177 Query: 165 QEENIWIVGTAGEADHTLYQS-KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVS 223 ++ WI+ T E + ++++ ++A++MG EGEG++R+ E D + IP+ G+V+ Sbjct: 178 KKNEYWILATDEEGEEGIWETLPDVSQMAVIMGNEGEGVKRILLEDADYVARIPLYGAVT 237 Query: 224 SLNVSVATGICL 235 SLNV VA GI L Sbjct: 238 SLNVVVACGITL 249 >UniRef50_Q6KIE3 SpoU class tRNA/rRNA methylase n=1 Tax=Mycoplasma mobile RepID=Q6KIE3_MYCMO Length = 230 Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 109/200 (54%), Gaps = 12/200 (6%) Query: 46 QGVVIQLANRQYLDE--KSDGAVHQGIIARVKPGRQYQ-ENDLPDLIASLDQPFLLILDG 102 + ++++ N Q L+E K++ HQ I+A +K + EN + D D+ +LILD Sbjct: 37 KDIIVEYTNLQTLNELVKTN---HQNIVAELKEFNYFSLENIIKD---KADK--VLILDH 88 Query: 103 VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMR 162 + D N G+ LRSA+A G + +I+P RS ++N A KV+ G +V +I++ +L + Sbjct: 89 IQDSFNFGSILRSANAFGWNYIIIPSKRSVEINDVALKVSSGGFYNVKIIKIDSLIVAIN 148 Query: 163 MLQEENIWIVGTA-GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGS 221 L+E WI G+ E + + + + L++G E G+ + D + I M+G+ Sbjct: 149 FLKEHGFWIYGSMLDENSFEIKNAPINFPIGLIIGNEHSGLSKTMINSLDVKVKIMMSGT 208 Query: 222 VSSLNVSVATGICLFEAVRQ 241 V SLN +VATGI L + ++ Sbjct: 209 VQSLNAAVATGILLHDLSKK 228 >UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZH70_PLALI Length = 271 Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 59/175 (33%), Positives = 95/175 (54%), Gaps = 3/175 (1%) Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 HQG+ AR+ ++ D L + L+ILDG+ D NLGA +R A+A G +++ Sbjct: 96 HQGLAARMP---EFPYADFEGLFQAQLPALLVILDGIQDSFNLGAIIRCAEALGAGGIVL 152 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 P+ + +N+ A + + GA +P+ RV L R + L+ + I+ +++ +L+ Sbjct: 153 PEKGQSGVNSQAARSSAGAVNFLPIYRVPALDRAIDQLKSRGMKILAATEKSEQSLWNVV 212 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + L L++G EG+G+ CD + IPMAG SSLN +VA GI L E RQ Sbjct: 213 IPAPLCLIIGNEGKGVSSALLSACDIQVRIPMAGQTSSLNAAVAAGILLAEIQRQ 267 >UniRef50_Q1UZI1 SpoU rRNA Methylase family protein n=3 Tax=Candidatus Pelagibacter RepID=Q1UZI1_PELUB Length = 247 Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 67/238 (28%), Positives = 117/238 (49%), Gaps = 9/238 (3%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDK--RLLPLIHALESQGVVIQLANRQYLD 59 S +I G HAV L + +VF+ + + R P + LE V + +++ LD Sbjct: 5 SFLIVGQHAVIEALRNPKRKVLKVFLTEESKKNIHRKNPKKNVLED--VKVYFKSKKELD 62 Query: 60 EKS--DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSAD 117 + + D +H G IA V+ + DL + I ++ + +D VTDP N+G+ +RSA Sbjct: 63 KYTSKDQIMHGGYIAEVE---HIDQPDLKEFIKGKNELTFVCIDEVTDPRNIGSLIRSAS 119 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 + + +IV + + + K A G E + + V+N+ T++ L+E+N W+ G Sbjct: 120 SFHIDGLIVKERQFPSDSKLMYKAASGCMEHINIFEVSNINSTLKNLREKNFWVYGFDAR 179 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + + K G+ L+ G+EG GMR T ++ D + I + V SLN+S + I Sbjct: 180 GEKDFTEIKWEGKNVLLFGSEGFGMREHTGKYTDFFVKIDINKDVESLNISNSAAIVF 237 >UniRef50_Q820Y2 TRNA/rRNA methyltransferase n=2 Tax=Tropheryma whipplei RepID=Q820Y2_TROWT Length = 263 Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 86/246 (34%), Positives = 130/246 (52%), Gaps = 18/246 (7%) Query: 5 IYGIHAV-QALLERAPE---RFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 I GI+ V +AL ER P + F LK + R+ +++ + + + R LD Sbjct: 26 IVGINPVYEALRERVPSIKLLIDKSFALK--HNPRVSKIMNYSDIPHIFVP---RSTLDR 80 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLI-LDGVTDPHNLGACLRSADAA 119 +D HQG+ K R + +L L + +P L I D VTDP NLGA +RSA A Sbjct: 81 LTD-LPHQGVALLCKSYRPSRAEEL--LKQTWPRPPLFIACDQVTDPRNLGAIVRSAAAF 137 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA- 178 AV++ K+RSA++ K + GA +P+ V NL R + +E +++G + Sbjct: 138 RASAVLIGKNRSARVTPMVWKASAGAVGKLPIAEVGNLTRYIVRFREYGGFVLGLDSNSK 197 Query: 179 ---DHTLYQSKMTGR-LALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGIC 234 D +++ K R L L++G+EG G+ L ++HCDEL++IP SV SLNVSVA I Sbjct: 198 TPIDKSVFLKKEDKRALLLIVGSEGSGISHLVKKHCDELLTIPTDASVDSLNVSVAVSIA 257 Query: 235 LFEAVR 240 L+E R Sbjct: 258 LYELQR 263 >UniRef50_D0JBH4 SpoU rRNA methylase family protein n=2 Tax=Blattabacterium RepID=D0JBH4_BLASB Length = 267 Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 55/156 (35%), Positives = 93/156 (59%), Gaps = 7/156 (4%) Query: 93 DQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLI 152 + +LILDG+ P N+GA LR+ADAAG+H +I+ ++ N+ + + G+ + I Sbjct: 109 NNSLILILDGIEKPGNIGAMLRTADAAGIHIIILCNMKTHIYNSNVIRCSLGSVFTRK-I 167 Query: 153 RVTNLARTMRMLQEENIWIVGTAGEADH----TLYQSKMT-GRLALVMGAEGEGMRRLTR 207 + + + LQE + IVGT G +H LY++K+ LA++ G+E +G+ + Sbjct: 168 FIEKMGSIISWLQENKVKIVGT-GFYNHQKAKNLYKTKLNYSNLAIIFGSENKGISNIWF 226 Query: 208 EHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 +++I+IPM G+V SLNVS A I ++E +RQR+ Sbjct: 227 NIANKIITIPMFGNVDSLNVSHAMSIIIYEIIRQRN 262 >UniRef50_Q5FFT7 Hypothetical tRNA/rRNA methyltransferase n=4 Tax=Ehrlichia ruminantium RepID=Q5FFT7_EHRRG Length = 249 Score = 102 bits (255), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 49/146 (33%), Positives = 83/146 (56%) Query: 97 LLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTN 156 +++LD VTD +N+G+ +RSA VHAVI+P S N K + GA + +P++ V N Sbjct: 102 IILLDQVTDVYNVGSIIRSAVCFNVHAVILPYYNSPSENCGMSKTSSGAIDMIPIVYVVN 161 Query: 157 LARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISI 216 ++ + L++ W G + L++ K+ + ++ G+E +G+R LT+E+CD L+ I Sbjct: 162 ISNAIHTLKKAGYWCYGFDAKQGEPLHKIKLDNKRLVIFGSENKGLRTLTKENCDFLLKI 221 Query: 217 PMAGSVSSLNVSVATGICLFEAVRQR 242 + + SLNVS A I L+ Q Sbjct: 222 ATSERIDSLNVSNAAAIALYSIFIQN 247 >UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacillales RepID=C6CVT7_PAESJ Length = 264 Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/150 (38%), Positives = 83/150 (55%), Gaps = 1/150 (0%) Query: 93 DQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLI 152 + +++LDGV DP N+G +RSADA G AV++ K N + G+ +P+I Sbjct: 113 NNSLVVVLDGVRDPGNVGTIIRSADAVGADAVVLGKGSVDLYNPKTVRSTMGSLFHLPII 172 Query: 153 RVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDE 212 +LA + Q + I +VGT+ +A HT Y T L+MG E EG+ R DE Sbjct: 173 E-ADLAELLPEAQSKGIKLVGTSLQATHTCYTYDWTAGTWLLMGNESEGLSDAVRLAVDE 231 Query: 213 LISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + IPM G SLNV++A + L+EAVRQR Sbjct: 232 SVIIPMQGEAESLNVAMAATVLLYEAVRQR 261 >UniRef50_C6WJ30 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJ30_ACTMD Length = 248 Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 7/241 (2%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 +YG V L+ +V + +G ++ A +GV +Q A Q + + Sbjct: 12 VYGRKPVLEALDDPRLEVDKVLMAEGARGPAAKEILDAASRRGVRVQRATAQRVKVLAGN 71 Query: 65 AVH-QGIIARVKPGRQYQENDLPDLIASLDQPF-LLILDGVTDPHNLGACLRSADAAGVH 122 H QG++A V R P +A +P +L+LDG+T P N+G LR+A AAGV Sbjct: 72 GRHDQGVLADVVAPRMA-----PLALALESRPRGVLLLDGITTPANVGMILRTATAAGVE 126 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 ++VP+ A ++ K + G A P++R A L+ + A ++ Sbjct: 127 GIVVPRRGVASIDPLVVKASAGVAFRAPVLRCGTAAEAAAQLRAAGYPLFALDASAKRSV 186 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 Y +++ R A V+G+E G+ REH + +SIPMA V SLNV+ A + FE VR+R Sbjct: 187 YAAELPERAAFVLGSETAGVSDGVREHVTDWLSIPMAAGVESLNVASAAAVLCFEVVRRR 246 Query: 243 S 243 S Sbjct: 247 S 247 >UniRef50_Q98R32 TRNA/RRNA METHYLTRANSFERASE n=1 Tax=Mycoplasma pulmonis RepID=Q98R32_MYCPU Length = 229 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 21/198 (10%) Query: 46 QGVVIQLANRQYLDE--KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPF-----LL 98 + + I++ ++Q+LD K + HQG +A +K SLDQ +L Sbjct: 39 KNIKIEVKDKQFLDSLVKEN---HQGYVAVLKSLN----------FVSLDQMIKSKETIL 85 Query: 99 ILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLA 158 ILD + DP+N GA LRSA+A G+ +I P R+ +N+T KV+ G ++ + +++ Sbjct: 86 ILDHLEDPYNFGAILRSANAFGIKNIIYPIKRAVDINSTVLKVSSGGFVNLRFYKSNSIS 145 Query: 159 RTMRMLQEENIWIVGTAGE-ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP 217 T+ L+++ WI ++ + + + LV+G E +G+ + T++ D+L I Sbjct: 146 ATIDKLKKQGYWIYSSSLDPTSEDINKISFNNPSVLVIGNEKKGISQTTKKQSDQLFYIK 205 Query: 218 MAGSVSSLNVSVATGICL 235 GSV SLN SVA GI Sbjct: 206 TKGSVQSLNASVAAGIIF 223 >UniRef50_A5D0U2 rRNA methylases n=2 Tax=Peptococcaceae RepID=A5D0U2_PELTS Length = 270 Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 80/239 (33%), Positives = 113/239 (47%), Gaps = 4/239 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G+ V+ L A V+ + E +R L+ QGV + + E + Sbjct: 28 LIEGVRFVEEALNSAWPVEMLVYCRRITETRRGEALLEKASFQGVPLVEVDESLFGELAG 87 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QG +A VK G+ L DL A + L+I+DGV DP NLG +RSA AAG Sbjct: 88 TTTPQGALAVVKKGKV----SLEDLQAGGEPALLVIVDGVQDPGNLGTIVRSAGAAGAGG 143 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VI+ K + NA A + GA VP+++ M L++ I V D +Y Sbjct: 144 VILLKGTADIFNAKALRATMGAIFYVPVVQDVTSVEAMTYLKQLGIKAVAGDPRGDKLIY 203 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 +T ALV+G+E G E + IPM G SLNV+V++ + LFEAVRQR Sbjct: 204 DCDLTVPCALVLGSEAAGAGEPVLRMVAERVRIPMPGRAESLNVAVSSAVLLFEAVRQR 262 >UniRef50_A4S7U0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S7U0_OSTLU Length = 318 Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/204 (34%), Positives = 99/204 (48%), Gaps = 5/204 (2%) Query: 44 ESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGV 103 E++ V ++ A++ L+ D HQG++ + DLP + P L LD + Sbjct: 111 EARAVTVKRASKHDLNMACDNKPHQGVLLDAEALEIPTLEDLPKWDGRGEPPVWLALDEI 170 Query: 104 TDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRM 163 DP NLGA LRSA GV V+ SA NAT K + GA E+ + + + R + Sbjct: 171 VDPQNLGAALRSAHFLGVDGVVCCAKNSAPFNATVSKASAGAMEAQVVHQTGVMHRFLAK 230 Query: 164 LQEENIWIVGTAGEAD-HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGS- 221 ++E +VG A +A + + LVMG EG G+R R C+ LI IP + S Sbjct: 231 ARDEGWDVVGAAADARAEDVSDFSVRAPTILVMGNEGSGLRTNVRRACNRLIEIPRSASS 290 Query: 222 ---VSSLNVSVATGICLFEAVRQR 242 V SLNVSVA GI + V R Sbjct: 291 AAGVDSLNVSVAAGILIHRLVAAR 314 >UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Clostridium RepID=B8I1W5_CLOCE Length = 269 Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 6/194 (3%) Query: 50 IQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNL 109 I L + E SD QGI+A +K + + + + ++ILD + DP N Sbjct: 77 ISLVPEKIFREVSDTQTPQGILAVIKKNKYSFDKVITE------GSSVVILDCLQDPGNA 130 Query: 110 GACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI 169 G +R+ADAAG+ AV++ K + + G+ +P+ N+ +R+L++ + Sbjct: 131 GTIIRTADAAGISAVLMSKGCVDLYSPKVLRSTMGSVFHIPIFEGLNITEIIRVLKQNDY 190 Query: 170 WIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSV 229 ++ + + +Q +TGR A+++G E G+ T D L+ IPM G SLN SV Sbjct: 191 KVIASHLSGKNNYFQEDLTGRSAIIVGNEANGISDETAYMADSLVKIPMPGKAESLNASV 250 Query: 230 ATGICLFEAVRQRS 243 A + ++E VRQ+S Sbjct: 251 AASVMIYEIVRQKS 264 >UniRef50_B6R0T8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodobacteraceae RepID=B6R0T8_9RHOB Length = 289 Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 70/235 (29%), Positives = 118/235 (50%), Gaps = 11/235 (4%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE-KSD 63 IYG+H ++A + PER + ++ +RL ++ V ++ A+ + +D+ Sbjct: 58 IYGLHTIEAAF-KNPERKRHKLVVTQNALRRLEERNLKID---VPVEDASPRDIDKLVGK 113 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 AVHQG V +Y +L D +L LD VTDPHN+GA LRSA A A Sbjct: 114 DAVHQGAALLVDALPEYGPEELKD------GQLVLALDQVTDPHNVGAILRSAVALNADA 167 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V+ + + + K A GA + + +R+ N++R + ++++ + E + Sbjct: 168 VVTTRRHAPEEGPVLAKTASGALDMIKHVRIQNMSRFVEEMRDKGYQAIALDSEGPEAVE 227 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + T + LV+G+EG+G+R R+ CD L + M G + SLNVS A + L+ A Sbjct: 228 NTAFTDKTLLVLGSEGKGVREGVRKSCDTLARLDMPGEIKSLNVSNAAILSLYVA 282 >UniRef50_C0QYW1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QYW1_BRAHW Length = 236 Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 48/142 (33%), Positives = 80/142 (56%) Query: 93 DQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLI 152 + P + ILD +TD HNLGA +R+A V +I+PKD SA +N +++ GAA +P+ Sbjct: 87 ENPLIFILDSITDVHNLGAIIRNAYFFDVAGIIMPKDNSAPINEKVYEISEGAAYHLPIS 146 Query: 153 RVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDE 212 TNL R + +++++ WI + + + +L K A+++G E G+R + +++ D Sbjct: 147 IETNLNRVIDLMKDKGFWIYYASEKGETSLEDFKFNSPTAIILGNEHSGVRDILKKNSDG 206 Query: 213 LISIPMAGSVSSLNVSVATGIC 234 I I SLNVS A+ I Sbjct: 207 SIIINAVNDFDSLNVSAASAII 228 >UniRef50_A0NWK7 TRNA/rRNA metyltransferase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NWK7_9RHOB Length = 271 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 25/243 (10%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHAL---ESQGVVIQLANRQYLDE 60 ++YG+H V+A F K R+ +L +AL E +GV I + + Sbjct: 40 LLYGLHTVEA-----------AFANKDRKRLKLFATDNALRRLEERGVKIDVPVESMMPR 88 Query: 61 KSD-----GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRS 115 D AVHQG+I P Y L +L LD VTDPHN+GA LRS Sbjct: 89 ALDRMVTKDAVHQGMILEADPLPAYGAEHLKGAR------LVLALDQVTDPHNVGAILRS 142 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 A A AV+ + + + + K A GA + + +RV N+AR + +++E + Sbjct: 143 AVALDADAVVTTERHAPEEGSVLAKSASGALDMIKHVRVKNMARFIAEMKDEGFSCIALD 202 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + +L ++ + + LV+G+EG+G+R+ RE C + M G + SLNVS A + L Sbjct: 203 SDGPASLEETPFSDKTVLVLGSEGKGVRQGVREACGLTARLDMPGEIRSLNVSNAAVLSL 262 Query: 236 FEA 238 + A Sbjct: 263 YVA 265 >UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAJ1_9BACT Length = 273 Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/238 (32%), Positives = 111/238 (46%), Gaps = 17/238 (7%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 YG+ V+ APE F G+ + PL+ S+GV + L++ + Sbjct: 46 YGMEIVEVFF--APEHFL------GQNE---FPLLETFASEGVKVCQVAPFLLEKMAYRE 94 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 +G+IA K R + ++P L L+ + V P NLG+ LRSADAAGV I Sbjct: 95 RPEGLIAIAKMKR-HTLAEMPVRPNGL----YLVAEAVEKPGNLGSMLRSADAAGVDGFI 149 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 + + N + + GA SVPL N L++ NI + D Sbjct: 150 ICNKCTDIYNPNVIRASTGALFSVPLAEAEN-QEAYDWLKKNNIRTLAATPHTDQIYTDV 208 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 MT +A+V+G E G+ L EH D + IPM G + SLNV+ AT I L+EA RQR+ Sbjct: 209 DMTQAVAIVVGTEQTGLTELWMEHSDLPVRIPMLGKIDSLNVATATTILLYEAARQRN 266 >UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8STN2_9FIRM Length = 272 Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 51/159 (32%), Positives = 85/159 (53%), Gaps = 1/159 (0%) Query: 84 DLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVAC 143 ++ D+ S D LILD + DP N+G RSA+AAG+ VI+ N + Sbjct: 109 EMTDIAGSTDTATYLILDTIQDPGNMGTIFRSAEAAGITGVIIGPGSCDPYNPKVVRSTM 168 Query: 144 GAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMR 203 GA VP ++ +L T+ L+ + + I G + + LY ++ ++A ++G EG G+ Sbjct: 169 GAIFRVPFVQSDDLIYTIDALKRKGVLIYGAHLDGEE-LYDTEFPDKIAFLIGNEGNGLS 227 Query: 204 RLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + D L+ IPM G V SLN +++ + +EA+RQR Sbjct: 228 KAVSDTADRLLRIPMEGKVESLNAAISATLLSYEAMRQR 266 >UniRef50_B6YR56 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YR56_AZOPC Length = 274 Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 6/177 (3%) Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 HQGI+A KP L DL S + P +++L+ + P NLGA LR+A+AA + A I+ Sbjct: 101 HQGILALAKPKLHL----LADLNLS-NNPLIIVLESIEKPGNLGAILRTAEAAKIDATII 155 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 + N + + G S P+ +N T+ L+ +++ I A Y + Sbjct: 156 CNPSTDIYNPNVVRSSIGCLFSNPIAVASN-EETLAYLKSKSVQIFAAELTAFKQYYNTD 214 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 T A+V+GAE G+ ++ + I IPM G + SLNVSV+ I FEA+RQR+ Sbjct: 215 FTSASAIVIGAEVNGLTNFWLDNAHQRIKIPMQGIIDSLNVSVSVAIITFEAIRQRN 271 >UniRef50_C0GP39 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GP39_9DELT Length = 240 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 74/233 (31%), Positives = 111/233 (47%), Gaps = 3/233 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ G V LE PE ++ ++K + L P+I V +L Q L + Sbjct: 4 NLVLGKKPVMEALEENPEHI-DLVLVKKPVPRGLDPVISRCRQLHVRFKLVPDQELQQM- 61 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 GA QGI AR++ + L + P LL+LD V DP NLG R+ A G Sbjct: 62 -GAARQGIAARLRMQTLVDLDLLLNNTTRAVFPVLLLLDQVQDPGNLGTLARTLAALGGA 120 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +I+P+DRSA L A K + GA + + +VTNLART+ + + I + ++ Sbjct: 121 GIIIPRDRSAPLGPGAMKASAGALNRIGVAQVTNLARTLDHIDQAGFNIYAATMDQGQSV 180 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + LV+G E +G+R + C I IPMAG + SLNV+ A + L Sbjct: 181 LEQTFVFPAVLVLGGEEKGIRPNVLKRCPGKIHIPMAGGMDSLNVAHAGALIL 233 >UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J4Z3_DESRM Length = 267 Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 4/204 (1%) Query: 39 LIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLL 98 L+ +GV + + + E SD QG++A ++ + L D+I +P ++ Sbjct: 64 LLDLARDKGVEVLAVSDAIMKELSDTETPQGMLAVLR----QPDYTLEDIIRPDQKPLVV 119 Query: 99 ILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLA 158 I+DGV DP NLG +RSADAAG VI+ K N + G+ +P+I+V+++ Sbjct: 120 IVDGVQDPGNLGTIIRSADAAGASGVILLKGTVDIYNPKTLRATMGSLFHLPVIQVSDVN 179 Query: 159 RTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM 218 + L + ++ ++++ + + +++ EG G R + + I+IPM Sbjct: 180 EALEYLASIGVTLLVGEPAGGIPVFKANLQTPVGIIVANEGAGPREEIFRYNHQKITIPM 239 Query: 219 AGSVSSLNVSVATGICLFEAVRQR 242 G SLNV++AT I L+EA+RQR Sbjct: 240 PGCAESLNVAIATSIILYEAIRQR 263 >UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2399 n=2 Tax=Archaeoglobaceae RepID=Y2399_ARCFU Length = 224 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 3/148 (2%) Query: 96 FLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVT 155 F+L LD V D N+GAC+R+A+ G V++PK R + A K + GA +P+ RV Sbjct: 78 FILFLDNVVDQRNIGACIRTAEFFGAAGVVLPKRRVGSIQEGAVKASAGAVFHIPIARVE 137 Query: 156 NLARTMRMLQEENIWIVGTAGEAD-HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELI 214 N A ++ L++ + A + D L + A+V+G E G+ R ++ CD ++ Sbjct: 138 NFASAIKKLKK--LGFTTLAADLDGEDLEAVSLLLPAAVVIGGEDRGVSRPVKKQCDFVV 195 Query: 215 SIPMAGSVSSLNVSVATGICLFEAVRQR 242 IP G V+SLN+SVA GI L+ RQ+ Sbjct: 196 KIPGVGKVNSLNLSVAAGIFLYTLSRQK 223 >UniRef50_UPI0000D53948 hypothetical protein P700755_33595 n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D53948 Length = 160 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/155 (38%), Positives = 89/155 (57%), Gaps = 2/155 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E++ G++ V +++ P Q +FI +G + +R ++ E +G+ I + + +E Sbjct: 8 ELVCGLNVVSEIIKIRPRSVQNLFI-EGSKKERFKSVLEKAEKEGITINERGKDFFEENF 66 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQ I + E L LI + LLILDG+TDPHNLGACLRSA AA V Sbjct: 67 RDVNHQNIALSCNKRSEETEVFLEKLIDK-KELRLLILDGITDPHNLGACLRSAAAASVD 125 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNL 157 AVIVPK+RS L T ++++ GA+E +P + VTNL Sbjct: 126 AVIVPKNRSCHLTPTVRRISSGASELIPFVIVTNL 160 >UniRef50_D0RMZ2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RMZ2_9RICK Length = 233 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 6/169 (3%) Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 HQG A+++ R Y N +L + L++LDG+TD N+GA +R+A A + +I+ Sbjct: 65 HQGFFAQIE--RNYSNNK-EEL---FKEKNLIMLDGLTDQRNIGAIIRTASAFNIKQIII 118 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 K N K A G + + + + +N+ + L++++ W G G + ++ Sbjct: 119 NKKDIVTSNLLLNKTASGGMDLINIFQTSNIINLFKELKKKDYWFYGFDGNSKTIFKKNL 178 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 ++ + + G+EG+G+R + +++CD L+ I + V SLNVS + L Sbjct: 179 LSEKNVFIFGSEGKGLREIIKKNCDHLVRININNKVDSLNVSASVASAL 227 >UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A7B5E9_RUMGN Length = 275 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 53/148 (35%), Positives = 77/148 (52%) Query: 95 PFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRV 154 P L+ILD + DP NLG R+A+AAGV +I+ +D N + GA +P + V Sbjct: 126 PHLMILDNLQDPGNLGTIFRTAEAAGVTGIIMSRDCVDIYNPKTIRSTMGALYRMPFVYV 185 Query: 155 TNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELI 214 +L T+ L+E+NI + +T + A ++G EG G+R + D I Sbjct: 186 EDLRETIHTLKEKNIKSYAAHLDGKNTYDKEDYRQGTAFLIGNEGNGLREEIAQCADTWI 245 Query: 215 SIPMAGSVSSLNVSVATGICLFEAVRQR 242 IPM G V SLN +VA + +FE RQR Sbjct: 246 RIPMCGQVESLNAAVAATVLMFEVSRQR 273 >UniRef50_A6Q6S3 RNA methyltransferase, TrmH family n=2 Tax=Epsilonproteobacteria RepID=A6Q6S3_SULNB Length = 234 Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 72/234 (30%), Positives = 111/234 (47%), Gaps = 17/234 (7%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLP--LIHALESQGVVIQLANRQYLDEK 61 +IYG LE+ PE V++ K K +LP L H + I+ ++ Sbjct: 8 IIYGKQVCLYALEKHPETVSTVYVAK----KGILPQKLFHQFHDK---IKFLEEKWAQSM 60 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 S G HQG++ + E + P L + FL+ILDG+TD N+GA +RSA A G Sbjct: 61 SKGGNHQGLLLEI------SELEQPSLSDVKREDFLVILDGLTDVGNIGAIVRSAYALGA 114 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AVI + A A + + GA +P + + N+ L + + G A E D Sbjct: 115 DAVIATGVKQLNFEAIA-RTSSGALLDMPFLLIPNILDVCNELHQVGFKLYGAAMEGD-A 172 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + + + AL++G+EG+G+ + + D LISI M + SLNVS A I + Sbjct: 173 VQLMEFERKRALILGSEGKGLSKKAQGKIDHLISIEMKHAFDSLNVSAAAAILI 226 >UniRef50_Q7NAH8 SpoU n=2 Tax=Mycoplasma RepID=Q7NAH8_MYCGA Length = 260 Score = 96.7 bits (239), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 4/204 (1%) Query: 38 PLIHALESQGVVIQLANRQYLDEKS-DGAVHQGIIARVK-PGRQYQENDLPDLIASLDQP 95 PL+ ++ +G+ +L ++ D + D HQG +A + N + I + Q Sbjct: 51 PLLKLIKQKGIEYELHTIKWFDNQYRDLPNHQGFVAEIDGSSLTISFNQFCEKIKNEQQG 110 Query: 96 FLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVT 155 +++LD + DP N G LRS AA V VI KD +N T K + GA + LI V Sbjct: 111 IVVVLDQIHDPGNFGGILRSCLAANVLGVIFKKDNQVSINNTVIKTSLGACFYLNLIEVA 170 Query: 156 NLARTMRMLQEENIWIVGTAGEADHTL-YQSKMTGRLALVMGAEGEGMRRLTREHCDELI 214 NL+ ++ LQE+ + + +D Y + L++G E +G+ ++ D I Sbjct: 171 NLSYAIKDLQEKYGFWSYVSNLSDQAQDYNVDYANKSILIVGNEQKGVSSQLIKNADYQI 230 Query: 215 SIPM-AGSVSSLNVSVATGICLFE 237 IPM + SLNVSVATGI LF Sbjct: 231 KIPMYTDKIQSLNVSVATGIMLFN 254 >UniRef50_P47494 Uncharacterized tRNA/rRNA methyltransferase MG252 n=3 Tax=Mycoplasma RepID=Y252_MYCGE Length = 242 Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%) Query: 34 KRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLD 93 K+L+PLI E++ + Q+ + + + + HQ ++A + D L+ LD Sbjct: 36 KKLIPLI---EAKKINFQIHSTNWFNNQYRDINHQELVAVL---------DTNQLLIPLD 83 Query: 94 Q----------PFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVAC 143 Q L++LD + DP+N GA LR+ A+ V +I K+ +N T K + Sbjct: 84 QLVKVVENKKCSTLVMLDEIQDPYNFGAILRTCLASEVDGIIFKKNNQVPINNTVMKTSM 143 Query: 144 GAAESVPLIRVTNLARTMRMLQEENIW-IVGTAGEADHTL-YQSKMTGRLALVMGAEGEG 201 G+ L++V NL+ T+ L+E W +V T + Y+ + L++G E G Sbjct: 144 GSVFYQNLVQVANLSYTITKLKEIGFWTVVSTLDPIWKPIDYRKVDFAKKILIVGNEDRG 203 Query: 202 MRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + +L ++ D I IPM ++SLNVSVA GI LF Sbjct: 204 VNQLITKNADCRIKIPMNNKINSLNVSVALGIILF 238 >UniRef50_A1VHL4 RNA methyltransferase, TrmH family, group 3 n=9 Tax=Desulfovibrionales RepID=A1VHL4_DESVV Length = 274 Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 77/233 (33%), Positives = 107/233 (45%), Gaps = 2/233 (0%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G+ V LL P R VFI +GR L+ V L Q LD+ Sbjct: 32 VLPGLKPVLELLASDPARIDTVFIRRGRRTPDTDRLMDLCREMRVRFSLVEGQVLDKLYA 91 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G HQG++AR+ + +DL P ++ LD V DP N G RS A G Sbjct: 92 GG-HQGVVARLFEAGYVELDDLLRDAPDAPLPLIIALDQVQDPGNAGTLARSLYALGGAG 150 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT-AGEADHTL 182 +IVP+ +A L A A + A GA E +P+ RV NLAR + E I G GE Sbjct: 151 LIVPRHNAAYLGAGAHRAAAGALEKLPVARVANLARALDEAAEAGYAIYGAMCGEGSVNA 210 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + + + LV+G E +G+R + CD L+ IPM S NV+ A + L Sbjct: 211 FTATLRTPCVLVLGNEDKGIRPNVAKRCDTLLHIPMLRDFDSFNVAQAGALLL 263 >UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IND6_ACIBL Length = 285 Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 71/242 (29%), Positives = 125/242 (51%), Gaps = 15/242 (6%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDK--RLLPLIHA-LESQGVVIQLANRQYLDEK 61 + G+H ++ + R+ RF+ +F + ED+ +LLP IH+ +E+ + ++ + L E Sbjct: 54 VEGVHLLEEAI-RSGLRFKTIFFSQAAEDRAGKLLPQIHSNVETLLLPDEVFSSAVLTES 112 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 QG+ A VK + L DL+ + + P LL + GV DP NLG LRSA+A G Sbjct: 113 P-----QGVAALVK----LKTFKLEDLLRA-ENPMLLGVAGVQDPGNLGTILRSAEAFGA 162 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 V++ ++ N + + G+ +P+++V A + L+ + + I+ T+ Sbjct: 163 TGVLIGDKTASPWNPKVIRGSSGSVFRLPVVKVEWPA-ALEQLRAKGVQILATSSHKGEP 221 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L + TG +++G EG G+ R D ++IP + V SLN +A I ++EA RQ Sbjct: 222 LPEVDFTGPTIVLIGGEGAGVPRDVLASVDGTLAIPHSPKVESLNAGIAASIVMYEAARQ 281 Query: 242 RS 243 R+ Sbjct: 282 RN 283 >UniRef50_D2R0C4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0C4_9PLAN Length = 272 Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 74/223 (33%), Positives = 118/223 (52%), Gaps = 8/223 (3%) Query: 24 EVFILKGRE--DKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQ 81 E+F+L G E + HA ES G I +RQ +++ + G + +I + Sbjct: 51 ELFVLDGVELSATSQQTMRHARES-GATILPVSRQVMEKLAFGDRVEEVILVAESPSPAL 109 Query: 82 ENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKV 141 + L D +A+ + +++GV P NLGA LRSADAAG+ VIV R N A + Sbjct: 110 DTFLQDKLAAKRDLLVAVVEGVEKPGNLGAILRSADAAGIDGVIVCGARLDLYNPNAIRA 169 Query: 142 ACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA--GEADHTLYQSKMTGRLALVMGAEG 199 + GA ++P+I +T + + + L+ ++ T G D+T + + GR A+++G+E Sbjct: 170 SLGALFTLPVIGMT-VPQALAWLRMHQFQMLATRVDGAIDYT--TADLRGRTAIILGSEA 226 Query: 200 EGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 EG+ R IS+PM G+V SLN+SV I +EA+RQR Sbjct: 227 EGLSREWLGDDIRAISLPMLGTVDSLNLSVTAAILFYEALRQR 269 >UniRef50_B6IWB6 RNA methyltransferase, TrmH family n=6 Tax=Proteobacteria RepID=B6IWB6_RHOCS Length = 265 Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 80/241 (33%), Positives = 121/241 (50%), Gaps = 10/241 (4%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I G+ AV A+ R P+R Q +F + R + + P L +L ++ LD + Sbjct: 29 ICGLPAVAAVFARDPDRVQRLF-YEERHRQAVGPFCARLAEARKPYRLVEKEELDRVAGT 87 Query: 65 AVHQGIIARVKPGRQYQEN-DLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV-H 122 +H G++A +P + N D A+ +P LL+LDG+ +PHNLGA +R+A G+ Sbjct: 88 PLHGGVVAVAEPRQVLPFNPDWAKRWAAEGRP-LLLLDGIGNPHNLGAIVRTAAFFGLDR 146 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 VI AQ + +A +VA G E V + R A +R L E + +VGTA L Sbjct: 147 LVISDHPEQAQPSESAYRVAEGGFEYVQIYRADRFATAVRRLAE-SYRVVGTALGGHPAL 205 Query: 183 YQSKMTG---RLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 ++TG A+++G E +G+ T C EL +IP AG V SLNV+ I +E Sbjct: 206 --GRLTGGPKPPAVLLGNEEDGLPAETLRACAELATIPGAGQVQSLNVAATAAILAWEMT 263 Query: 240 R 240 R Sbjct: 264 R 264 >UniRef50_Q04UK4 RRNA methylase n=6 Tax=Leptospira RepID=Q04UK4_LEPBJ Length = 277 Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 80/145 (55%), Gaps = 1/145 (0%) Query: 97 LLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTN 156 +L+++GV P NLG LR+A+ AG H VIV + N + + GA ++ + + Sbjct: 130 ILVIEGVEKPGNLGTILRTAEGAGFHTVIVSDPKLDLFNPNVIRASTGALFTLD-VYLGE 188 Query: 157 LARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISI 216 + +L++ + + EA + + + G++ALV G+E G+ R H DE +S+ Sbjct: 189 IETIYGILKKNHYRTLAVTPEAKKFYFDADLKGKIALVFGSEQYGLSSYARNHSDEYLSL 248 Query: 217 PMAGSVSSLNVSVATGICLFEAVRQ 241 PM G SLN++++ GI ++E +RQ Sbjct: 249 PMLGEADSLNLAMSAGILMYEVIRQ 273 >UniRef50_B1M5G3 RNA methyltransferase, TrmH family, group 3 n=16 Tax=Bacteria RepID=B1M5G3_METRJ Length = 281 Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 54/140 (38%), Positives = 75/140 (53%) Query: 103 VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMR 162 +TDPHN+GA +R+A A GV ++ + K A G E VP + V NLA + Sbjct: 141 ITDPHNVGAIVRTAAAFGVAGIVTTARHAPGATGVLAKSASGGLEHVPFVTVRNLAEALI 200 Query: 163 MLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSV 222 L E VG +A +L + L +V+GAEG+G+R TR CD L IP +G++ Sbjct: 201 ELGERGFTRVGLDSDAPESLDALTVARPLVIVLGAEGKGLRERTRGCCDVLARIPFSGAI 260 Query: 223 SSLNVSVATGICLFEAVRQR 242 SLNVS A I L+ R+R Sbjct: 261 RSLNVSNAAAITLYALGRKR 280 >UniRef50_C7PC85 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PC85_CHIPD Length = 197 Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 84/147 (57%), Gaps = 1/147 (0%) Query: 98 LILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNL 157 ++L+ V DPHN+ A LR+ DA G+ V V +A+ K + AA+ + + + ++ Sbjct: 22 VVLENVFDPHNISAVLRTCDAVGIQDVYVLNTTTARRKRWGHKSSSSAAKWLTVHQFSDT 81 Query: 158 ARTMRMLQEENIWIVGTAGEAD-HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISI 216 A M +++E+ I T AD +LY+ TG +ALV G E EG+ R+ CD I Sbjct: 82 ATCMAVVREKYDKIYTTHLAADAKSLYELDFTGSVALVFGNEQEGVSEEIRKLCDGNFII 141 Query: 217 PMAGSVSSLNVSVATGICLFEAVRQRS 243 P G + SLN+SVA + ++EA+RQ+S Sbjct: 142 PQVGIIKSLNISVACAVSIYEAMRQKS 168 >UniRef50_Q7UG85 SpoU rRNA methylase family protein n=1 Tax=Rhodopirellula baltica RepID=Q7UG85_RHOBA Length = 281 Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 1/154 (0%) Query: 90 ASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESV 149 +S + +L+LD V P NLGA RSADAAGV AV++ S + N A + + GA +V Sbjct: 127 SSWNDGLILVLDRVEKPGNLGAVFRSADAAGVSAVLLSDCPSDRFNPNAIRGSLGAVFTV 186 Query: 150 PLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREH 209 P + ++ L+ + E L+ S + G++A+V+G+E +G+ Sbjct: 187 PSASGSE-SQMEAFLKTHGYRVAAMRVEGSRPLFDSDLRGKVAVVLGSEADGLADRWAGD 245 Query: 210 CDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 + +++PMAG V SLNVSV+ I FEAVRQRS Sbjct: 246 SIDPVALPMAGHVDSLNVSVSAAIVAFEAVRQRS 279 >UniRef50_UPI00016C0619 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0619 Length = 262 Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 5/182 (2%) Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 SD QG++A VK + L D + +L IL+G+ DP NLG +R+A V Sbjct: 82 SDTKTPQGLMAIVKQ----RNKSLNDFTIKQNGTYL-ILEGIKDPGNLGTIVRTAYGLFV 136 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 A+ + KD + + GA + +IR + + +E + I T + Sbjct: 137 DAIFLTKDCVELYSPKVVRATMGAISKIDIIRNYEMTSYVDFFRENKVKIYATDLYQSNN 196 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 LY +K G A+V+G E G+ TR D I IP ++ SLN ++AT I L+E RQ Sbjct: 197 LYTTKFDGSSAIVIGNEATGISEYTRAQADSTIKIPTRDNLESLNAAIATSIVLYEVARQ 256 Query: 242 RS 243 ++ Sbjct: 257 KN 258 >UniRef50_D2MNZ0 RNA methyltransferase, TrmH family n=1 Tax=Bulleidia extructa W1219 RepID=D2MNZ0_9FIRM Length = 237 Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 65/242 (26%), Positives = 118/242 (48%), Gaps = 12/242 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G +V+A LE +++ ++D+ L ++ V + R+ ++ + Sbjct: 2 IIEGATSVKAALEAKKRVVNALYVDDKKKDRNLNYILFKAHEAHVPVYRLKREEINTLAF 61 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G H G++A V E + D + FLL+L+GV DP N G +R+A +AGV Sbjct: 62 GKTHGGLLADV-------EERIMDHLEISRSSFLLVLEGVVDPFNFGYMVRTAYSAGVDG 114 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +++P+ L + K + GA + +I +LA+ +R+L+E+ I AG D+ + Sbjct: 115 ILIPEYHWHDLESVILKSSAGAFDHCSIIPSKDLAQDLRLLKEKGFTIY--AGYRDNAIV 172 Query: 184 --QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMA-GSVSSLNVSVATGICLFEAVR 240 ++ T +G E G+ + E D+ + IP A G ++LN + A + FE +R Sbjct: 173 YDEADYTNPTVFCVGGELRGLSKQVLEQVDQAVYIPYANGFKNALNAASACSVFCFEVLR 232 Query: 241 QR 242 QR Sbjct: 233 QR 234 >UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5P1_9CHLA Length = 277 Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 59/174 (33%), Positives = 92/174 (52%), Gaps = 2/174 (1%) Query: 69 GIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPK 128 G+IA + P DL + + + PFL++ + + P NLG LR +DA G+ A+IV Sbjct: 102 GLIA-IAPQFHLSLEDLGKQLKNQNNPFLIVAEAIEKPGNLGTILRCSDAVGLDALIVCD 160 Query: 129 DRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMT 188 + N + + G +VP+I + A T++ L+++ I I+ A L +T Sbjct: 161 ACTDIHNPNVVRASVGTLFTVPVIE-SQGAETLQWLKQKGISILAATPHAKQELADIDLT 219 Query: 189 GRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 G LA+ +G E G+ E D + IPM G SLNV++AT I L+EA+RQR Sbjct: 220 GPLAIAVGTEQLGLSPQWMEQADIQVRIPMYGIADSLNVAMATTILLYEALRQR 273 >UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42339 Length = 281 Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/235 (31%), Positives = 120/235 (51%), Gaps = 20/235 (8%) Query: 4 MIYGIHAVQALLERAPERFQ-EVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +I G H V+ L+ +F EV ++ ++ +LPL + ++I + Q L E S Sbjct: 61 LIEGFHLVEEALKA---KFHIEVILMT---EQTVLPLTWEVYENDIII--VSPQVLKEIS 112 Query: 63 DGAVHQGIIARVK-PGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + QGI A P P + +L FLLI D V DP N+G +R+ADAAG+ Sbjct: 113 ETETPQGIAAVCAIPA--------PPSMTTLSGQFLLI-DRVQDPGNIGTMIRTADAAGM 163 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 V++ + N+ + + G+ +P+IR +L + L+E+NI + GT+ + Sbjct: 164 TGVVLGEGSVDLFNSKVIRASQGSIFHMPVIR-GSLIEWVEKLKEKNIPVFGTSLTEASS 222 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + AL++G EGEG++ E D+ I IP+ G SLNV+VATGI L+ Sbjct: 223 YTAIEPQPEFALIVGNEGEGVQSELLEGSDQNIYIPIYGQAESLNVAVATGILLY 277 >UniRef50_A8RCR6 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCR6_9FIRM Length = 243 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 119/243 (48%), Gaps = 5/243 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + ++ G +V+A+L+ Q + + ++DK ++ + QG+ IQ A R +D Sbjct: 3 TYIVEGNISVKAVLQAKRRVVQRIVVDAKKKDKDTSYILRLAKKQGITIQAAQRAEIDTL 62 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + G H GI+A R+YQ + D+I S + FL +++GV DP N G LR+ AAG Sbjct: 63 AQGKTHGGILAYCGE-RRYQ--SIEDII-SKENVFLALVEGVEDPFNFGYVLRTLYAAGC 118 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +IV K T + + GA+E + + ++ T++ ++++ I + + + Sbjct: 119 DGIIVGKRNWTSAVNTVTRASAGASEYINIFVSEDMEATIQQMKKQQITFLCAQRKDAIS 178 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSV-SSLNVSVATGICLFEAVR 240 LY + + +G E G+ + D+ + IP +++ + +T I FE VR Sbjct: 179 LYDYHFPKKCCIAIGGEMRGLSKAVMAQSDQNLFIPYRSEFRNAMTAAASTAIFAFELVR 238 Query: 241 QRS 243 Q++ Sbjct: 239 QKN 241 >UniRef50_A7NNQ2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Roseiflexus RepID=A7NNQ2_ROSCS Length = 496 Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 52/146 (35%), Positives = 78/146 (53%) Query: 97 LLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTN 156 +L + + +P NLG LR+ADAAGV AVIV + + + A GA +P+ + Sbjct: 336 ILATEQINNPENLGMTLRTADAAGVEAVIVAGSGADPFHRECVRAARGAVGRIPIYTCAD 395 Query: 157 LARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISI 216 L + + I +VG G + TLY + + L +++G E EG+ T C L+ I Sbjct: 396 LPTWVGQARARGIHVVGATGNVERTLYDADLPLPLMIIVGNETEGLTDATLAVCSSLVRI 455 Query: 217 PMAGSVSSLNVSVATGICLFEAVRQR 242 PMA SLNV VA G+ L++ VR+R Sbjct: 456 PMAPGQDSLNVGVAAGVILYDIVRRR 481 >UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS4_UNCTG Length = 255 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 52/176 (29%), Positives = 90/176 (51%), Gaps = 6/176 (3%) Query: 68 QGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVP 127 QGI+A V+ ++Y + D+I + ++L+ + DP NLG +RSADA G AV V Sbjct: 83 QGIMAIVE--KKYYA--VEDIIK--NSGLFILLENIQDPGNLGTIIRSADAFGAKAVFVS 136 Query: 128 KDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKM 187 K + + + G+ +P+I N+ T+ +++ + I + + + + L K Sbjct: 137 KGSADIYSDKTIRATMGSIFHLPIIDSINIKNTLNLMKNKKISVFAASLKGEKYLNDIKF 196 Query: 188 TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 + A V+G E G+R T D L+ I M G+ SLN + A I ++EA + R+ Sbjct: 197 PNKSAFVIGNEANGLRSETENSADTLVKIYMPGNTESLNAATAASIIMYEAAKNRT 252 >UniRef50_UPI0000ECA455 rRNA methyltransferase 1, mitochondrial precursor (EC 2.1.1.-). n=2 Tax=Gallus gallus RepID=UPI0000ECA455 Length = 317 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 18/259 (6%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALES--QGVVIQLANRQYLD 59 SE+++G+ L +A +F+ + +RL+ L++ +GV + R+ LD Sbjct: 54 SEILFGVAPCSMALSQARRDLFRLFLKRSGGPQRLVTSEFVLQAAARGVPVLHVGRRELD 113 Query: 60 EKSDGAVHQGIIARVKPGR-----QYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLR 114 G VHQG+ P R + +E L D + Q L L+ + DP NLGA LR Sbjct: 114 TLCGGRVHQGVCLEATPLRFKRLEEAEEPGLGDGESPNRQLLWLALEQIQDPMNLGALLR 173 Query: 115 SADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT 174 SA GV V+ + S L T K + GA E + +L ++ E +VGT Sbjct: 174 SAYFLGVDRVVTSQRNSCPLTPTVSKASSGAMEVFDVYSTDDLRSFLKAKAAEGWEVVGT 233 Query: 175 AGEADH-------TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP----MAGSVS 223 +++ + + + + LV+G+EG+G+ T+ C +++ IP + + Sbjct: 234 VSQSETVENVPVISCLEFRWNKPIILVIGSEGDGLSLETQLLCHQMLVIPSGRALHPGIE 293 Query: 224 SLNVSVATGICLFEAVRQR 242 SLNVSVATGI L Q+ Sbjct: 294 SLNVSVATGILLHSICSQK 312 >UniRef50_C0GJM5 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJM5_9FIRM Length = 264 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 81/234 (34%), Positives = 116/234 (49%), Gaps = 11/234 (4%) Query: 12 QALLERAPER--FQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQG 69 + L+ A ER EV L+ P + ALESQ V+ +A + + D + QG Sbjct: 35 EKLIRDAIERRVLPEVVYLREGLTPEEFPFLQALESQVPVLSIAEKLF-DRTAFTDSPQG 93 Query: 70 IIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAGVHAVIVPK 128 I+A V P ++DL DL + +P LL+ DGV DP NLG LRSA AAG I+ Sbjct: 94 ILA-VAP---RPKSDLTDLF--VKKPALLLVADGVQDPGNLGTMLRSAAAAGADGAILLP 147 Query: 129 DRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMT 188 N A + A GA ++ ++ TN + L + +V TA A+ + Sbjct: 148 GTVDATNPKALRAAMGAYFALSVVE-TNHQDCLSALAGHGVSLVTTAARAEVAYDRYDWN 206 Query: 189 GRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 +A+V+G EG G+ E +SIPMAG+V SLN ++A + FEA RQR Sbjct: 207 TPVAVVIGNEGSGVSPAMAEAAKSRVSIPMAGAVESLNAAIAMSVIFFEAARQR 260 >UniRef50_B2S202 Putative uncharacterized protein n=2 Tax=Treponema pallidum RepID=B2S202_TREPS Length = 319 Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/254 (31%), Positives = 121/254 (47%), Gaps = 23/254 (9%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S + G+ AV+ L PE+ F R KR PL L ++ + + AN Q L+ Sbjct: 25 SLTVCGLRAVETLGSIHPEKIHRFFFTPVR-AKRFGPLCAYLAARKRLYRSANTQELERL 83 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASL------DQPFLLILDGVTDPHNLGACLRS 115 + HQG+ A + E P + S + F+++LD V D HNLGA +RS Sbjct: 84 TQSVHHQGVAATID------EPRFPAVTHSQVEFWVQRREFVVLLDRVGDAHNLGAIIRS 137 Query: 116 ADAAGVHAVIVPKDR-SAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT 174 A GVH+++V R AQ+ + +VA G E V L+R TN + M + + VG Sbjct: 138 AAFFGVHSLVVSDCRQQAQVTSATYRVAQGGMEFVQLLRCTNAQEVLEMCAGK-MTRVGA 196 Query: 175 AGEADHTLYQSKMTGRLA------LVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVS 228 + A +L ++++ L+ LV+G E G+ HCD L I +G V SLNV+ Sbjct: 197 SPHAFRSL--TRLSNILSPEEAVILVLGNEETGLSEHLTAHCDHLCRIAGSGQVESLNVA 254 Query: 229 VATGICLFEAVRQR 242 A + L V+ R Sbjct: 255 QAGALFLSTIVQLR 268 >UniRef50_B7G778 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G778_PHATR Length = 212 Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 71/211 (33%), Positives = 104/211 (49%), Gaps = 19/211 (9%) Query: 48 VVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQE--NDLPDLIASLDQPFL-LILDGVT 104 + I ++ L+ S HQG + R G+ + E N +P P + L+LD V Sbjct: 1 IPIASVDKGVLNTLSGNRPHQGYVLRC--GKLFFESLNKIPHPDEDSAAPSMWLVLDEVV 58 Query: 105 DPHNLGACLRSADAAGVH---AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTM 161 DP NLGA LRSA G ++V SA + T + GA E V L +NL RT+ Sbjct: 59 DPQNLGALLRSAYFLGGSTKVGILVCAKNSAPPSPTVSAASAGALELVDLYSTSNLPRTL 118 Query: 162 RMLQEENIWIVGTAG----EADHTLYQ----SKMTGRLALVMGAEGEGMRRLTREHCDEL 213 + + IVG + + + LY+ S+M+G LV+G+EG G+R L + C E Sbjct: 119 AAAESDGFRIVGASASVPRDLNVPLYELQEISEMSGPTILVLGSEGHGLRSLVAKSCTEF 178 Query: 214 ISIPM---AGSVSSLNVSVATGICLFEAVRQ 241 + +P AG V SLNVSV GI L+ ++ Sbjct: 179 VKVPGAVDAGGVDSLNVSVTGGILLWHFLKD 209 >UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium RepID=A5N255_CLOK5 Length = 266 Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 94/175 (53%), Gaps = 10/175 (5%) Query: 68 QGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVP 127 QGIIA VK +E ++ D +Q F ++ D + DP N+G +RSA A+G +I Sbjct: 94 QGIIAVVKN----KELNIKD-----EQGFYILADRIQDPGNMGTIIRSAHASGALGIITT 144 Query: 128 KDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKM 187 K N + G+ +P+I+ NL + + L++ ++ ++ ++D Y + Sbjct: 145 KGTVDVYNEKTLRATMGSIFYIPIIQDENLEK-VSTLRQMGFKLISSSLDSDINFYDMDL 203 Query: 188 TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 G++ + +G EG G+ + ++ D ++IPM G+ SLN +VA I +FE VRQ+ Sbjct: 204 RGKIIIAIGNEGNGLLQDVKKISDIEVNIPMPGNAESLNAAVAASIMMFEVVRQK 258 >UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes RepID=C5WEU6_STRDG Length = 245 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 73/240 (30%), Positives = 116/240 (48%), Gaps = 22/240 (9%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S +I G H + +++ + F+ +F+L+ ++ + + VV L + L E Sbjct: 26 SYLIEGWHLFEEA-QQSGQGFRHIFVLEELAER-------VADQEKVV--LVSADVLKEL 75 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRSADAAG 120 +D QGIIA V D+P L D Q LIL+ V DP NLG +R+ADAAG Sbjct: 76 TDSPSPQGIIAEV---------DMPQLAFPTDYQGKYLILEDVQDPGNLGTIIRTADAAG 126 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V + + + N+ + G+ +P+ R T++ + R +QE N ++ T Sbjct: 127 FDGVFLSEKSADVYNSKTLRSMQGSHFHLPIWR-TDIYKICREMQEHNTPVLATTLSKVS 185 Query: 181 TLYQS-KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 Y++ ALVMG EG+G+ D+L+ I M G SLNV+VA GI +F + Sbjct: 186 VDYKTVPHQESFALVMGNEGQGISAEMTTLADQLVHITMPGQAESLNVAVAAGILIFSFI 245 >UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPG2_9FIRM Length = 270 Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 5/181 (2%) Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 +D QGI+ V ++Y +DL S D+ +++LD V DP N+G +R+ADAAG Sbjct: 90 TDTEQPQGILC-VMEKKRYTFDDLQ----SSDRELIVVLDNVQDPGNVGTVVRTADAAGC 144 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+ K + + + G+ +P+I L+ + I ++ TA ++ Sbjct: 145 CGVILTKGCADLFSGKTVRATMGSLFHLPVITGVAEQEVAAFLERQGIRLLATALDSSSL 204 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + + +A+V G EG G+ ++ E DE + IP+ G SLNV+VA + L+EA RQ Sbjct: 205 YHDVDLRSPVAIVFGNEGAGVSKVILEKADERLYIPLYGRAESLNVAVAAAVILYEARRQ 264 Query: 242 R 242 R Sbjct: 265 R 265 >UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z380_EUBE2 Length = 279 Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 10/208 (4%) Query: 40 IHAL-ESQGVV---IQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP 95 +H L + QG+ I++ D S QGI+A V+ +++ + D++ D P Sbjct: 77 VHELVKKQGISSDSIEIVADNVFDRMSQTQTPQGIMAVVR----MKDSSISDMLT--DNP 130 Query: 96 FLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVT 155 L++++ + DP NLG LR + AGV VI+ + N + G+ VP + V Sbjct: 131 LLILVENLQDPGNLGTILRMGEGAGVTGVIMSSNTVDIYNPKTIRSTMGSIFRVPFVYVQ 190 Query: 156 NLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELIS 215 + + + + I + + +T A ++G EG G+ + D LI Sbjct: 191 DFSDAVSQCKNAGIKVYAAHLDGKNTYLGEDYREGTAFLIGNEGNGLTEDITKQADTLIR 250 Query: 216 IPMAGSVSSLNVSVATGICLFEAVRQRS 243 IPM G V SLN ++A I +EAVRQRS Sbjct: 251 IPMQGEVESLNAAIACTILTYEAVRQRS 278 >UniRef50_D1CFS4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CFS4_THET1 Length = 266 Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 1/147 (0%) Query: 97 LLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTN 156 LL L V DP N+G+ LR+ADA GV VI+ D + + + GA +V LI+ T+ Sbjct: 119 LLALKAVQDPGNIGSILRTADAVGVRYVILLGDSVDPYDPNSVRAGAGATFTVKLIK-TS 177 Query: 157 LARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISI 216 R + I ++G G A + L+MG+E +G+ + CD L+S+ Sbjct: 178 FERLLDWKNIHQIPVIGAVGGAPLNYSRVNYPYPCILLMGSERQGLDLREQSSCDMLVSV 237 Query: 217 PMAGSVSSLNVSVATGICLFEAVRQRS 243 PM G V SLN++VAT + L+E QRS Sbjct: 238 PMVGKVDSLNLAVATSVILYEIFDQRS 264 >UniRef50_D1BMG9 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Veillonella RepID=D1BMG9_VEIPT Length = 264 Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 64/211 (30%), Positives = 93/211 (44%), Gaps = 8/211 (3%) Query: 32 EDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARV-KPGRQYQENDLPDLIA 90 +DK +L L+ Q V +A D+ + QG++A V KP + + D Sbjct: 58 QDKNILDLLDLDTVQSVPKYIAQDPVFDKVDNTVNGQGVVAIVSKPTYDIESISIVD--- 114 Query: 91 SLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVP 150 + LDGV DP NLG +R+A AAGV + + K N + A +P Sbjct: 115 ----GLYITLDGVQDPGNLGTIIRTAVAAGVKGIFLMKGTVDPFNDKTVRSTMSALHKIP 170 Query: 151 LIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHC 210 L L M+ E N+ TA E + + + R LV+G EG G+ C Sbjct: 171 LYEDITLTLLHDMVTESNMTSYVTALEHSNPYHTVRYAKRTMLVLGNEGNGVTPEVMNLC 230 Query: 211 DELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 I IPM G + SLNVSVA +C+++ Q Sbjct: 231 TNRIMIPMYGDMESLNVSVAAALCMYKVQEQ 261 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 320 2e-86 UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 298 9e-80 UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ... 294 1e-78 UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransfera... 294 2e-78 UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35... 286 3e-76 UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 ... 286 5e-76 UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 ... 286 5e-76 UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0... 286 6e-76 UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 286 6e-76 UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14... 284 2e-75 UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 284 2e-75 UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 283 3e-75 UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acid... 283 3e-75 UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 ... 283 4e-75 UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 ... 282 7e-75 UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 281 2e-74 UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ... 280 2e-74 UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepI... 280 3e-74 UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 279 5e-74 UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter ... 279 5e-74 UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 ... 279 7e-74 UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thio... 278 1e-73 UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 ... 277 2e-73 UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lacto... 277 2e-73 UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiale... 277 2e-73 UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase... 277 3e-73 UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 ... 277 3e-73 UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 277 3e-73 UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipe... 276 4e-73 UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=... 276 6e-73 UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 ... 275 1e-72 UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 ... 274 1e-72 UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Delt... 274 2e-72 UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 ... 274 2e-72 UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 ... 273 3e-72 UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 273 4e-72 UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51... 273 5e-72 UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 ... 273 5e-72 UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 272 6e-72 UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli Re... 272 6e-72 UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Helio... 272 6e-72 UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase... 271 1e-71 UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 ... 271 1e-71 UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteri... 271 2e-71 UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 ... 271 2e-71 UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyan... 270 3e-71 UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntro... 269 5e-71 UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 ... 269 5e-71 UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine... 269 6e-71 UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desu... 268 9e-71 UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase... 268 1e-70 UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac... 268 1e-70 UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 ... 268 2e-70 UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 ... 267 2e-70 UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21... 267 3e-70 UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 ... 265 1e-69 UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltra... 264 1e-69 UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase... 264 1e-69 UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bac... 264 2e-69 UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12... 263 4e-69 UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, put... 263 5e-69 UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostri... 262 9e-69 UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 ... 261 1e-68 UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 ... 261 2e-68 UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 ... 260 2e-68 UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 ... 259 7e-68 UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus... 259 7e-68 UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerof... 258 9e-68 UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas ... 258 1e-67 UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethio... 257 2e-67 UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 ... 256 3e-67 UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Dein... 256 4e-67 UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella... 256 4e-67 UniRef50_C0QBT7 RNA methyltransferase (TrmH family protein, grou... 256 4e-67 UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 256 7e-67 UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 ... 255 1e-66 UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 ... 254 1e-66 UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococ... 254 1e-66 UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 ... 254 2e-66 UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidet... 254 2e-66 UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 254 2e-66 UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fra... 254 2e-66 UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 ... 254 3e-66 UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 ... 252 9e-66 UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 251 2e-65 UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 ... 251 2e-65 UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H... 251 2e-65 UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae Re... 251 2e-65 UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 ... 250 3e-65 UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 ... 250 4e-65 UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 ... 250 4e-65 UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sph... 249 5e-65 UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A... 249 7e-65 UniRef50_Q8D323 YjfH protein n=1 Tax=Wigglesworthia glossinidia ... 248 1e-64 UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 ... 248 1e-64 UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clos... 247 2e-64 UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 ... 247 2e-64 UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 ... 247 3e-64 UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1... 246 4e-64 UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 ... 246 5e-64 UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 ... 246 5e-64 UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Te... 246 5e-64 UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales... 246 7e-64 UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacter... 246 7e-64 UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 ... 243 3e-63 UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=D... 243 4e-63 UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 ... 242 8e-63 UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Crypto... 242 9e-63 UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 ... 242 1e-62 UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacteriu... 241 1e-62 UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax... 241 2e-62 UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 ... 241 2e-62 UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 241 2e-62 UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 ... 239 6e-62 UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 239 7e-62 UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 ... 239 7e-62 UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 ... 239 9e-62 UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Ta... 238 1e-61 UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 237 3e-61 UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Ta... 236 4e-61 UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 ... 236 7e-61 UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 ... 235 9e-61 UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candida... 234 2e-60 UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale... 234 2e-60 UniRef50_D1I377 Whole genome shotgun sequence of line PN40024, s... 234 2e-60 UniRef50_D1B9Y1 RNA methyltransferase, TrmH family, group 3 n=1 ... 234 2e-60 UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 ... 234 2e-60 UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 ... 233 4e-60 UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 233 4e-60 UniRef50_Q5GSE7 RRNA methylases n=12 Tax=Rickettsiales RepID=Q5G... 232 6e-60 UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacte... 232 7e-60 UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacter... 231 2e-59 UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces ... 230 3e-59 UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomyceta... 230 3e-59 UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 ... 229 5e-59 UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=M... 229 5e-59 UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 ... 229 6e-59 UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group... 229 7e-59 UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 ... 229 9e-59 UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Ato... 229 9e-59 UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteri... 229 9e-59 UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collins... 228 1e-58 UniRef50_A9GVZ1 tRNA/rRNA methyltransferase n=1 Tax=Sorangium ce... 227 2e-58 UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostri... 227 3e-58 UniRef50_B4W2Z7 RNA methyltransferase, TrmH family, group 3 n=1 ... 226 4e-58 UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 226 4e-58 UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acida... 226 4e-58 UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 ... 226 5e-58 UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 ... 226 6e-58 UniRef50_A8LF93 RNA methyltransferase, TrmH family, group 3 n=16... 225 1e-57 UniRef50_B8FZK3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Desul... 225 1e-57 UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma R... 224 1e-57 UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 224 2e-57 UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotro... 224 2e-57 UniRef50_B8H4C5 23S rRNA Gm2251 methyltransferase n=3 Tax=Caulob... 224 2e-57 UniRef50_A1KPR5 Uncharacterized tRNA/rRNA methyltransferase BCG_... 223 4e-57 UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=... 223 4e-57 UniRef50_A5D0U2 rRNA methylases n=2 Tax=Peptococcaceae RepID=A5D... 222 8e-57 UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15... 222 9e-57 UniRef50_Q6IN84 rRNA methyltransferase 1, mitochondrial n=14 Tax... 222 1e-56 UniRef50_B9ILU6 Predicted protein n=1 Tax=Populus trichocarpa Re... 222 1e-56 UniRef50_C6BUS0 RNA methyltransferase, TrmH family, group 3 n=2 ... 221 1e-56 UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 ... 221 2e-56 UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium... 221 2e-56 UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clost... 221 2e-56 UniRef50_A8F2F0 tRNA/rRNA methyltransferase n=16 Tax=cellular or... 220 3e-56 UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacil... 220 4e-56 UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14... 220 4e-56 UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clost... 220 4e-56 UniRef50_Q5FFT7 Hypothetical tRNA/rRNA methyltransferase n=4 Tax... 220 4e-56 UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 ... 220 4e-56 UniRef50_A7HWP6 RNA methyltransferase, TrmH family, group 3 n=1 ... 219 5e-56 UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibaci... 219 9e-56 UniRef50_C5XJ83 Putative uncharacterized protein Sb03g034180 n=2... 218 1e-55 UniRef50_Q6UCQ6 Predicted tRNA/rRNA methyltransferase n=2 Tax=Ba... 218 2e-55 UniRef50_Q04SA9 TRNA (Guanosine-2'-O-)-methyltransferase n=4 Tax... 217 2e-55 UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Ta... 217 3e-55 UniRef50_Q1MSB5 RRNA methylases n=1 Tax=Lawsonia intracellularis... 217 3e-55 UniRef50_A4S7U0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 217 4e-55 UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 216 4e-55 UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clost... 216 8e-55 UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clost... 216 8e-55 UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachl... 215 9e-55 UniRef50_Q5JKV8 Putative tRNA/rRNA methyltransferase n=2 Tax=Ory... 215 1e-54 UniRef50_B0T2B4 RNA methyltransferase, TrmH family, group 3 n=2 ... 215 1e-54 UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victi... 215 1e-54 UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 ... 214 1e-54 UniRef50_Q2RQU5 RNA methyltransferase TrmH, group 3 n=3 Tax=Rhod... 214 2e-54 UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Ther... 214 2e-54 UniRef50_UPI0000ECA455 rRNA methyltransferase 1, mitochondrial p... 214 3e-54 UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma a... 213 4e-54 UniRef50_C6HZU7 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Lepto... 213 4e-54 UniRef50_A6Q869 RNA methyltransferase, TrmA family n=7 Tax=Prote... 213 4e-54 UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminoc... 212 6e-54 UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=... 212 7e-54 UniRef50_B3S0S7 Putative uncharacterized protein n=1 Tax=Trichop... 212 8e-54 UniRef50_C6XLJ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 212 8e-54 UniRef50_B2IK44 RNA methyltransferase, TrmH family, group 3 n=2 ... 212 8e-54 UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostri... 212 9e-54 UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID... 212 9e-54 UniRef50_C6WJ30 RNA methyltransferase, TrmH family, group 3 n=1 ... 212 1e-53 UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis ... 211 1e-53 UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planct... 211 2e-53 UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacter... 211 2e-53 UniRef50_C6V4C7 RNA methyltransferase, TrmH family, group 3 n=2 ... 210 4e-53 UniRef50_Q0BYS7 RNA methyltransferase, TrmH family, group 3 n=1 ... 210 4e-53 UniRef50_A3VTQ4 RRNA methylase n=1 Tax=Parvularcula bermudensis ... 210 4e-53 UniRef50_B3CT02 tRNA/rRNA methyltransferase, TrmH family n=2 Tax... 209 6e-53 UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 209 6e-53 UniRef50_D2MNZ0 RNA methyltransferase, TrmH family n=1 Tax=Bulle... 209 8e-53 UniRef50_Q4A651 Putative tRNA/rRNA methyltransferase n=1 Tax=Myc... 209 9e-53 UniRef50_Q7BKE9 Predicted rRNA methylase n=4 Tax=Bacteria RepID=... 208 1e-52 UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halot... 208 1e-52 UniRef50_Q7NAH8 SpoU n=2 Tax=Mycoplasma RepID=Q7NAH8_MYCGA 208 2e-52 UniRef50_O51468 Uncharacterized tRNA/rRNA methyltransferase BB_0... 208 2e-52 UniRef50_A4XKC2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clost... 207 2e-52 UniRef50_Q4SFE3 Chromosome 2 SCAF14604, whole genome shotgun seq... 207 3e-52 UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verru... 207 3e-52 UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Therm... 207 3e-52 UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitu... 206 6e-52 UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exigu... 206 7e-52 UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes Re... 206 7e-52 UniRef50_Q6MA83 Putative rRNA methylase n=2 Tax=Chlamydiae/Verru... 204 2e-51 UniRef50_D2LHP2 RNA methyltransferase, TrmH family, group 3 n=1 ... 204 2e-51 UniRef50_Q0BV71 23S rRNA Gm2251 methyltransferase n=13 Tax=Aceto... 204 2e-51 UniRef50_C1QAT9 rRNA methylase, putative, group 3 n=1 Tax=Brachy... 204 2e-51 UniRef50_A7IKP0 RNA methyltransferase, TrmH family, group 3 n=13... 204 2e-51 UniRef50_B6R0T8 RNA methyltransferase, TrmH family, group 3 n=2 ... 203 4e-51 UniRef50_Q30P99 RNA methyltransferase TrmH, group 3 n=2 Tax=Camp... 203 4e-51 UniRef50_C0WU39 RNA methyltransferase n=3 Tax=Lactobacillus RepI... 203 4e-51 UniRef50_D1A1M0 tRNA/rRNA methyltransferase (SpoU) n=26 Tax=Acti... 203 4e-51 UniRef50_UPI00006CAEFD RNA methyltransferase, TrmH family protei... 203 5e-51 UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis... 202 6e-51 UniRef50_C9RRQ7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibro... 202 8e-51 UniRef50_C0GP39 RNA methyltransferase, TrmH family, group 3 n=1 ... 202 9e-51 UniRef50_A1S8M2 Putative tRNA/rRNA methyltransferase n=1 Tax=She... 202 1e-50 UniRef50_A9T6G4 Predicted protein n=1 Tax=Physcomitrella patens ... 201 1e-50 UniRef50_Q0AY01 23S rRNA methyltransferase n=1 Tax=Syntrophomona... 201 1e-50 UniRef50_A6G5X9 RNA methyltransferase, TrmH family, group 3 n=1 ... 201 2e-50 UniRef50_Q4A787 TRNA/rRNA methyltransferase n=4 Tax=Mycoplasma R... 201 2e-50 UniRef50_A1VHL4 RNA methyltransferase, TrmH family, group 3 n=9 ... 201 2e-50 UniRef50_Q1GEY5 RNA methyltransferase TrmH group 3 n=13 Tax=Rhod... 201 2e-50 UniRef50_C1EER3 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 201 2e-50 UniRef50_Q6FPX7 Strain CBS138 chromosome I complete sequence n=1... 201 3e-50 UniRef50_C4XN87 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 200 4e-50 UniRef50_A9M5R9 RNA methyltransferase, TrmH family, group 3 n=39... 199 5e-50 UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepI... 199 5e-50 UniRef50_C4Q227 rRNA methylase, putative n=1 Tax=Schistosoma man... 199 6e-50 UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2... 199 7e-50 UniRef50_A1CIR5 RNA methyltransferase, TrmH family family n=5 Ta... 199 8e-50 Sequences not found previously or not previously below threshold: >UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=32 Tax=Proteobacteria RepID=RLMB_VIBVY Length = 247 Score = 320 bits (822), Expect = 2e-86, Method: Composition-based stats. Identities = 171/241 (70%), Positives = 205/241 (85%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +E IYGIHAV+A+L++ PERF E ++LKGR+D RL+P+++ L+ GV +Q R+ LD+K Sbjct: 3 NEFIYGIHAVRAVLDKEPERFIEAYVLKGRQDDRLMPILNELQMVGVSLQQMTRKTLDDK 62 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + GA HQGIIARVKP +Q ENDL D++A P LLILDGVTDPHNLGACLR+ADAAGV Sbjct: 63 AHGANHQGIIARVKPAKQLNENDLDDILAKHASPLLLILDGVTDPHNLGACLRNADAAGV 122 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AVIVPKD+SA + AT KVACGAAE+VPL+RVTNLARTMR LQE+ IWIVGTAGEA H Sbjct: 123 AAVIVPKDKSAPMTATVSKVACGAAETVPLVRVTNLARTMRHLQEQGIWIVGTAGEATHD 182 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +YQ+K+TG LA+VMGAEG+GMRRLTRE CD+LI IPMAG+VSSLNVSVA+GICLFEAVRQ Sbjct: 183 IYQAKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGAVSSLNVSVASGICLFEAVRQ 242 Query: 242 R 242 R Sbjct: 243 R 243 >UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=285 Tax=Proteobacteria RepID=RLMB_PSEPK Length = 248 Score = 298 bits (765), Expect = 9e-80, Method: Composition-based stats. Identities = 140/245 (57%), Positives = 184/245 (75%), Gaps = 4/245 (1%) Query: 1 MSEM--IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 MS++ IYG+HAVQALL+ P+R +++++ +GR + RL L+ V + A R+ + Sbjct: 1 MSQLEKIYGVHAVQALLQHHPKRVKQIWLSEGRSEPRLETLLALAAENRVPVGQAERREM 60 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRSAD 117 D +G VHQG++A V P + + E L +L+ + P +L+LDGVTDPHNLGACLR+AD Sbjct: 61 DAWVEG-VHQGVVAEVSPSQVWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTAD 119 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 AAG AVIVPKD+SA L +KVACGAAE +PL+ VTNLART+ LQ+ +W+VGTAGE Sbjct: 120 AAGATAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGE 179 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 A+ +YQ +TG L ++MGAEG+GMRRLTREHCD L+ +PMAGSVSSLNVSVATG+CLFE Sbjct: 180 AEQEIYQQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFE 239 Query: 238 AVRQR 242 AVRQR Sbjct: 240 AVRQR 244 >UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P9_MAGSM Length = 246 Score = 294 bits (755), Expect = 1e-78, Method: Composition-based stats. Identities = 129/246 (52%), Positives = 165/246 (67%), Gaps = 4/246 (1%) Query: 1 MSE--MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 MS+ I+G++ VQALLE +++LKGR KR+ +I ++GV IQ R + Sbjct: 1 MSDETKIHGVNPVQALLESG-RPVSSLWVLKGRHGKRVEEMIEGFRARGVPIQFCERTAM 59 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 D +DG HQG+IAR P +DL D++ QP L+ILDGV DPHNLGA +RSA+A Sbjct: 60 DRMADGGAHQGVIARCAPREAMSWDDLLDVVEKAKQPLLVILDGVEDPHNLGAIMRSAEA 119 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G AVI+PKDR+A LNA A K + GAAE + LIRVTNLAR + LQ+ N+W++G AGEA Sbjct: 120 FGALAVILPKDRTAPLNAGAIKASAGAAERLDLIRVTNLARAIEQLQQRNVWVIGLAGEA 179 Query: 179 DHTLY-QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 L G LALVMG EG G+RRLTRE CD+L +IPM G V SLNVSVATG+ L+E Sbjct: 180 GAPLIGTLDCKGPLALVMGNEGSGLRRLTRERCDQLAAIPMGGGVGSLNVSVATGVALYE 239 Query: 238 AVRQRS 243 +RQR+ Sbjct: 240 VLRQRA 245 >UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransferase yacO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUG1_SYNWW Length = 248 Score = 294 bits (753), Expect = 2e-78, Method: Composition-based stats. Identities = 95/247 (38%), Positives = 153/247 (61%), Gaps = 10/247 (4%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M E+++GI+AV L+ R +++ + R+DKRL ++ + + +Q ++ +DE Sbjct: 1 MKELVFGINAVSEALK-GQRRVYKIYAQRERQDKRLEEILTLAREKQLKLQYLEKKKMDE 59 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLD-----QPFLLILDGVTDPHNLGACLRS 115 +G HQGIIA V +Y DL ++ L PFLL+LDG+ DP NLGA +R+ Sbjct: 60 LCEGK-HQGIIAEV---ERYPYADLGQVLEKLQAQKEKPPFLLLLDGIEDPQNLGAIIRT 115 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 A+ AGV +I+P +SA++N T +V+ GA E + +IR NL T++ L++E W++G Sbjct: 116 AECAGVDGIIIPSHKSAEVNPTVSRVSAGAVEHMAIIRENNLVNTIKYLKQEGFWVLGAD 175 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 +A + + + + ALV+G EG+G+RRL RE+CD L+ IPM G ++SLN SVA + + Sbjct: 176 AKARQSYFNTSIPSPTALVIGGEGQGIRRLVRENCDILVRIPMFGQLNSLNASVAAALLI 235 Query: 236 FEAVRQR 242 +E +RQR Sbjct: 236 YEVLRQR 242 >UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes RepID=A6LPP3_CLOB8 Length = 300 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 91/241 (37%), Positives = 146/241 (60%), Gaps = 2/241 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +++ G +AV L R + ++I + + + ++ + ++I+ +++ LD Sbjct: 59 DIVIGRNAVIEAL-RGERTIEALYISNSKLEGSIKTIVGLAKENKILIKEVDKRKLDSMC 117 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSADAAGV 121 G VHQG+IA+V P + + +D+ DL + PF++ILD V DPHNLG+ +R+A+ GV Sbjct: 118 GGEVHQGVIAKVTPYKYSEVSDILDLAEKRGEAPFIVILDEVEDPHNLGSIVRTAELFGV 177 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H +I+PK RSA ++ T K + GA E V + +VTNL T+ L+E+ IWI G A+ Sbjct: 178 HGIILPKRRSASVSTTVYKSSVGAIEHVKIAKVTNLNSTIEELKEKGIWIYGADIRAEEY 237 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 YQ G A+++G EG G+ +LT E CD+LI IPM G ++SLN SVA GI ++E ++ Sbjct: 238 SYQVDFGGPCAVIIGNEGRGISKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMYEVLKG 297 Query: 242 R 242 R Sbjct: 298 R 298 >UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Gammaproteobacteria RepID=Q1LSR1_BAUCH Length = 248 Score = 286 bits (733), Expect = 5e-76, Method: Composition-based stats. Identities = 152/245 (62%), Positives = 198/245 (80%), Gaps = 3/245 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M+E+IYGIHAVQA+L+R P+ F+EV++L+ R D+R +I L+ + ++I++ NRQ+LD Sbjct: 1 MNEIIYGIHAVQAILKRDPQLFKEVYLLERRNDQRFQCIIKQLKQKKIIIKIVNRQWLDM 60 Query: 61 KSDGAVHQGIIARVK-PGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 + GA HQGIIARV+ RQ+QE DLP L+A P LL+LDGVTDPHNLGACLR ADAA Sbjct: 61 QVKGATHQGIIARVQTNRRQFQEQDLPALLAQHTAPLLLVLDGVTDPHNLGACLRCADAA 120 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 GV+A+I+P++RSA LNAT KKVA GAAE++PLI+VTNLART+R+LQE NI I+GT EAD Sbjct: 121 GVNAIIIPRNRSAYLNATVKKVASGAAETMPLIQVTNLARTLRLLQEHNILILGTTIEAD 180 Query: 180 HTLYQS--KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 +YQ+ K T +ALV+GAEG G+RRLT+++C+EL+ IPM GSV+SLNVSVA G+ LFE Sbjct: 181 SHIYQTSFKFTSPIALVVGAEGNGIRRLTKKYCNELLRIPMVGSVASLNVSVAVGVFLFE 240 Query: 238 AVRQR 242 VRQR Sbjct: 241 VVRQR 245 >UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Methylococcus capsulatus RepID=Q606P1_METCA Length = 250 Score = 286 bits (732), Expect = 5e-76, Method: Composition-based stats. Identities = 118/240 (49%), Positives = 157/240 (65%), Gaps = 1/240 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 ++GIHA +A L+ +P++ + ++ R RL + L+ GV I A+R+ LD +D Sbjct: 7 VWGIHAAEAALDYSPDKIVKAWLDDHRMQNRLQAVATRLDELGVEIVRADRKRLDRLADP 66 Query: 65 AVHQGIIARVK-PGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGI+ + PG Q + L L A+ P L+LD V DPHNLGACLR+ DAAGV Sbjct: 67 RKHQGILLELDLPGEQGEAELLDTLDAADGHPLYLVLDHVQDPHNLGACLRTCDAAGVKG 126 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 ++V KD+S L T KVA GAAE+VP+ RVTNLAR + ++ W+VG AGEA+ TLY Sbjct: 127 LVVTKDQSVGLTPTVAKVASGAAETVPVYRVTNLARCLDRFKQRGYWVVGAAGEAERTLY 186 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 + + L +VMGAEG G+RRLTRE CD L+ IPM G V SLN+SVATGI L+E +RQRS Sbjct: 187 ELDLRLPLVVVMGAEGVGLRRLTRERCDFLLRIPMVGGVESLNLSVATGIVLYEVMRQRS 246 >UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3 Length = 384 Score = 286 bits (732), Expect = 6e-76, Method: Composition-based stats. Identities = 97/242 (40%), Positives = 142/242 (58%), Gaps = 3/242 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +++YG HAV A L+ + ++I R D R I ++ G V+ + L++ Sbjct: 124 DLLYGHHAVLAALD-GDRQLNRIWITSHLRHDIRYRTKIQTAKANGTVVDEVDNFRLNQI 182 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAAG 120 + A HQGI A+V P ++ DL D S P L+I+D +TDPHNLGA +R+A+A G Sbjct: 183 THNANHQGIAAQVAPYHYWELGDLIDKAKSQSTAPVLIIIDSITDPHNLGAIIRTAEAFG 242 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +++P+ R A + +T KVA GA E P+ RV NL+R + L+E WI GT Sbjct: 243 AQGMVLPQRRVAGITSTVMKVAAGALEHFPVARVVNLSRALETLKESGFWIYGTVAGKQT 302 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 L+Q+ + + LV+G+EGEG+ LT++HCD LI+IP+AG SLN SVA I L+E R Sbjct: 303 ALHQADLREPMGLVIGSEGEGLSLLTQKHCDHLITIPLAGKTPSLNASVAAAISLYEIFR 362 Query: 241 QR 242 QR Sbjct: 363 QR 364 >UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=27 Tax=Neisseria RepID=RLMB_NEIMB Length = 250 Score = 286 bits (732), Expect = 6e-76, Method: Composition-based stats. Identities = 124/239 (51%), Positives = 162/239 (67%), Gaps = 3/239 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 IYG HAV A L + P+ E++I +G+ D R ++ ++ + + A+ L+ S G Sbjct: 7 IYGFHAVNARLWQNPKSIVELYIQEGKSDARTREVLEKAANENIRVYFADADRLNAISKG 66 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 A HQG++ + + + L D++ +L + P LLILDG+TDPHNLGACLR+ADA GVHA Sbjct: 67 ARHQGVVGFIDASKNH--VHLEDVLENLSEPPLLLILDGITDPHNLGACLRTADAMGVHA 124 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VI PKD+SA LNAT KVACGAAE+VP I VTNLART+R L+E IWI+GT + LY Sbjct: 125 VIAPKDKSAGLNATVSKVACGAAETVPYITVTNLARTLRELKEYGIWIIGTDMSGESDLY 184 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + A VMG EG+GMRRLTREHCD L+SIPM G+V S+NVSV+ G+ L E RQR Sbjct: 185 HCNLPDSAAWVMGNEGDGMRRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETRRQR 243 >UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes RepID=A3DH38_CLOTH Length = 277 Score = 284 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 93/240 (38%), Positives = 150/240 (62%), Gaps = 2/240 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I G ++V ++ ++ + KG ++ + +I +G+V+Q +R LD+ S Sbjct: 38 IEGRNSVLEAIKAG-RTINKILVPKGEKEGSIRQIIALARERGIVVQETDRSNLDKISTT 96 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQG+IA V + +D+ + + P+++ILDG+TD +NLG+ LR+ADA G H Sbjct: 97 HAHQGVIAYVAFKDYVEVDDILKIAQDKGEDPYIIILDGITDAYNLGSILRTADAVGAHG 156 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++PK R+ LNA K + GA E VP+ RVTN+++T+ L+++NIWIVGT + + Sbjct: 157 VVIPKRRAIGLNAAVSKASAGAIEYVPVARVTNISQTIEYLKKKNIWIVGTDLSGEKPFF 216 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 ++ + G +ALV+G+EGEGM RL E CD +++IPM G +SSLN +VA I ++E RQR+ Sbjct: 217 EADLKGPVALVIGSEGEGMGRLVSEKCDFIVNIPMQGKISSLNAAVAAAIIMYEIRRQRN 276 >UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Proteobacteria RepID=RLMB_COXBU Length = 250 Score = 284 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 125/245 (51%), Positives = 168/245 (68%), Gaps = 4/245 (1%) Query: 1 MSEM--IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 MS++ IYGIHAV +L+ AP+R ++++ + R+D+RL L+ ++ GV + L +R L Sbjct: 1 MSKIKSIYGIHAVSGVLDAAPQRIVKLYVQENRDDQRLQSLVEKAKALGVKVILLSRTEL 60 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSAD 117 + HQGI+A + E+ L L+ + P LLILDGV DPHNLGACLRSA+ Sbjct: 61 NTL-SNEKHQGIVADCEEVENLDESALLSLLKKRETPALLLILDGVKDPHNLGACLRSAN 119 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A GV AVI PKDR+ + +KVACGAAE P IRVTNL+RT+ LQ+E +WIVGTA E Sbjct: 120 AFGVRAVIAPKDRAVGVTPVVRKVACGAAEMTPFIRVTNLSRTIDWLQKEGVWIVGTAVE 179 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 A+ + + +TG +A+V+G+EG G+RRLT+E CD L IP+ GSV SLNVSVA GICL+E Sbjct: 180 AETLIQEIDLTGDIAIVLGSEGAGLRRLTKERCDFLAQIPLRGSVESLNVSVACGICLYE 239 Query: 238 AVRQR 242 RQR Sbjct: 240 VQRQR 244 >UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rickettsiella grylli RepID=A8PMQ1_9COXI Length = 253 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 112/246 (45%), Positives = 158/246 (64%), Gaps = 5/246 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E I+G H + ALL+ AP++ ++ + R+DKR+ + + + G+ I ++ +E Sbjct: 7 KEFIFGFHTITALLKSAPQKIDTLYCREDRQDKRVQSIRNLAKLHGIPIGTLSKVQCNEI 66 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIA-----SLDQPFLLILDGVTDPHNLGACLRSA 116 + AVHQG+ A++K + E DL + +L+ PFLL+LDGV DPHNLGACLRSA Sbjct: 67 APNAVHQGVFAKIKKTSRLNEQDLMIFLHHRLHNNLNPPFLLVLDGVQDPHNLGACLRSA 126 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 +AAGV AVI+P+DR+ +K A GAAE L VTNLA + L++ IW G Sbjct: 127 NAAGVDAVIIPQDRAVNKTPIVQKTAAGAAEVTSLFTVTNLATCLERLKKCGIWCYGLDQ 186 Query: 177 EADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 +Y + +TG LALV+GAEG+G+RRLT+ CD+L++IPM G+V SLNVSVA G+ LF Sbjct: 187 SGTRLIYDAPLTGPLALVLGAEGKGLRRLTKVCCDDLVAIPMVGTVGSLNVSVAAGVGLF 246 Query: 237 EAVRQR 242 E VRQR Sbjct: 247 EVVRQR 252 >UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acidobacteria RepID=Q1ISZ4_ACIBL Length = 261 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 100/241 (41%), Positives = 145/241 (60%), Gaps = 2/241 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++IYGIH V L+ FQ V I K R D R+ ++ G+ ++ R +LD + Sbjct: 2 DVIYGIHPVSEALKSRGRSFQYVAIAKDRMDPRVQRIVEDARESGITVRFLPRDFLDRTA 61 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 + +HQG+IA +D+ + + F+++LDG+ DPHNLGA +RSAD AGV Sbjct: 62 NTNMHQGVIAVTSKKEYLDLDDIIE-KKRGEHAFVVVLDGIEDPHNLGALIRSADGAGVD 120 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE-NIWIVGTAGEADHT 181 V++P+ R+ + TA K + GAAE VP+ RVTN+AR++ L+++ N+W VG Sbjct: 121 GVVIPERRAVGVTGTAMKASAGAAEYVPIARVTNIARSIEDLKDKYNVWTVGLDERGTQN 180 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + LALV+GAEG+G+ L R+ CD L+ IPMAG VSSLNVSVA GI ++E RQ Sbjct: 181 YDEIDYNMSLALVLGAEGKGLHDLVRKKCDLLVKIPMAGEVSSLNVSVAGGIVMYEVSRQ 240 Query: 242 R 242 R Sbjct: 241 R 241 >UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 Tax=Bacteria RepID=B8HJN1_CYAP4 Length = 387 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 98/242 (40%), Positives = 142/242 (58%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S++IYG H + A LE + + + + R D R L+ ++ GVVI + LD+ Sbjct: 126 SDLIYGRHTLLAALESERQLNRIWVVNQLRYDPRFHSLLLQAKAAGVVIDEVDYLRLDQI 185 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + A HQGI A+V P + + L + I LD P LL DG+TDPHNLGA +R+A+A G Sbjct: 186 TAHAKHQGIAAQVAPYSYLELDTLLENIQGLDHPVLLAADGITDPHNLGAIIRTAEALGA 245 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 ++VP+ R+ + +T KVA GA E + RV NL + + L+ WI G A A Sbjct: 246 QGLVVPQRRAVGITSTVAKVAAGALEHFAVARVVNLNQALEQLKAAGFWIYGMAATAAKP 305 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +Y + +G + LV+GAEG G+ L + +CD+L+SIP+ G SLN SVATG+ L+E RQ Sbjct: 306 IYSVEFSGPVVLVVGAEGTGLSLLAQRYCDQLVSIPLLGKTPSLNASVATGMALYEIFRQ 365 Query: 242 RS 243 RS Sbjct: 366 RS 367 >UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IX93_NOSP7 Length = 363 Score = 282 bits (723), Expect = 7e-75, Method: Composition-based stats. Identities = 90/243 (37%), Positives = 139/243 (57%), Gaps = 2/243 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLDE 60 +++IYG H V + L++ ++I R D + + G VI + LD Sbjct: 106 NDIIYGRHPVLSALQK-QRNLNRIWITTRLRYDPSFHHFLLQAKENGTVIDEVEPKRLDY 164 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 ++GA HQG+ A+ P + DL + S+ P +++ DG+TDPHNLGA +R+A+A G Sbjct: 165 LTNGANHQGVAAQTAPYGYIELADLIEQSKSVTDPVIVVADGITDPHNLGAIIRTAEAIG 224 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +++P+ R++ + +T KVA GA E+ + RV NL+R + L+E WI GTA Sbjct: 225 AQGLVIPQRRASGITSTVMKVAAGALENFTVSRVVNLSRALEELKEAGFWIYGTAASGSE 284 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++ G + LV+G+EGEG+ LT+ CD L+SIP+ G SLN SVA G+ L+E R Sbjct: 285 PVHTVNFKGPIVLVIGSEGEGLGMLTQRSCDFLVSIPLQGKTPSLNASVAAGMALYEIYR 344 Query: 241 QRS 243 QRS Sbjct: 345 QRS 347 >UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112 Tax=Proteobacteria RepID=RLMB_NITEU Length = 260 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 124/243 (51%), Positives = 161/243 (66%), Gaps = 3/243 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S+ I+G HA+ + L + P+ +E+++ R D+R L+ E+ + L + L + Sbjct: 4 SQYIFGFHAITSRLRQHPDSIKEIYLDTNRHDQRARDLMSLAETTSTRLILCEQDRLCKM 63 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAG 120 + HQG+ A V R+Y L DL+ L +P LL+LDGV DPHNLGACLR ADA G Sbjct: 64 TGTTRHQGVAAHVTKLRRY--ATLEDLLEGLTEPALLLVLDGVKDPHNLGACLRVADAFG 121 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VHAV+VPKDR+ L+AT KVA GA ++VP VTNLART+R L+E +WIVGTA +A Sbjct: 122 VHAVVVPKDRAVGLSATVHKVASGAVDTVPFFAVTNLARTLRELKEMGLWIVGTAADAPD 181 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 TL +T LA V+GAE GMRRLTRE CD L+SIPM+GS+ SLNVSV+ GICLFE R Sbjct: 182 TLDSVTLTRPLAWVLGAEDGGMRRLTREACDLLVSIPMSGSIESLNVSVSAGICLFETFR 241 Query: 241 QRS 243 Q S Sbjct: 242 QHS 244 >UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus RepID=Q2JI19_SYNJB Length = 378 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 98/243 (40%), Positives = 144/243 (59%), Gaps = 3/243 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E+IYG V A L+ V+IL K R + L L+ +++G VI + + L+ Sbjct: 106 EIIYGRQTVLAALKSQA-TLNRVWILPKLRYSPQFLSLLEEAKARGTVIDEVSPKRLNAL 164 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + GA HQGI A+ P + DL + + P L++LDG+ DPHNLGA RS +A G Sbjct: 165 TAGANHQGIAAQATPYQYVALEDLVERSRQAGPNPVLVVLDGIQDPHNLGAIARSVEAFG 224 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 + +++P+ R+A + +T KVA GA ++P+ RV NL R + L+E+ W+ GT Sbjct: 225 MQGMVIPQRRAAGVTSTVMKVAAGALSTLPVARVVNLNRALEYLKEQGFWVYGTTSRGAD 284 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +Y + +ALV+G+EGEG+ LT+ HCD+L+SIP+AG SLN SVA GI L+E R Sbjct: 285 PIYSADFQRPIALVVGSEGEGISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYEIHR 344 Query: 241 QRS 243 QRS Sbjct: 345 QRS 347 >UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepID=C3RMB5_9MOLU Length = 244 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 83/243 (34%), Positives = 136/243 (55%), Gaps = 4/243 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M + IYG + + L+ + V++ +D +I + + + ++ ++ + Sbjct: 4 MKQYIYGKNTILEALK-GDKSVYTVYVQNNAKD---NGIIEQCKRKKIPFKIVDKSEFIK 59 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 K HQG++A ++ R Y +++ + I QP LL+LDG+ DPHNLGA LR+ DA G Sbjct: 60 KLGNVSHQGVMAEIEEYRYYSIDEIINTIPDGKQPLLLMLDGLEDPHNLGAILRTCDAIG 119 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V VI+ K+RS LN T KV+ GA + V + +VTNL RT+ L++ + W+VG + Sbjct: 120 VDGVIIGKNRSVGLNGTVAKVSTGAIDHVKVAQVTNLTRTLEDLKKRSFWVVGCDLDKSQ 179 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 Q L +V+G+EG G+ RL ++ CD + +PM G V+SLN SVAT + L++ Sbjct: 180 DYRQVDYNMPLVIVIGSEGFGISRLVKKSCDINVVLPMVGHVNSLNASVATAVILYQVYN 239 Query: 241 QRS 243 R+ Sbjct: 240 SRN 242 >UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=23 Tax=Proteobacteria RepID=RLMB_CHRVO Length = 248 Score = 279 bits (715), Expect = 5e-74, Method: Composition-based stats. Identities = 134/245 (54%), Positives = 169/245 (68%), Gaps = 5/245 (2%) Query: 1 MSE--MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 MS +I+G HA+ A L + P+ E+++ GR D R ++ ++ V + + +++ L Sbjct: 1 MSNKRLIHGFHAINARLWQNPKSLIEIWLAGGRHDARAKAVLDKAGAENVKLHIVDKERL 60 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSAD 117 D S A HQG++A + Y DL D++ +L + P LLILDGVTDPHNLGACLR AD Sbjct: 61 DSMSGNARHQGVVAMIDASMNY--VDLDDVLENLSEPPLLLILDGVTDPHNLGACLRVAD 118 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A G HAVI PKDRSA LNAT KVACGAAE VP I VTNLART+R L++ +WI GT E Sbjct: 119 AMGAHAVIAPKDRSATLNATVSKVACGAAEVVPYITVTNLARTLRDLKDAGVWIAGTTME 178 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 AD LY +G LA VMGAEGEGMRRLTREHCD L+SIPM G+V SLNVSV++G+ L E Sbjct: 179 ADTDLYHFDASGPLAWVMGAEGEGMRRLTREHCDVLVSIPMFGTVESLNVSVSSGMVLSE 238 Query: 238 AVRQR 242 + RQR Sbjct: 239 SRRQR 243 >UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter violaceus RepID=Q7MBB6_GLOVI Length = 338 Score = 279 bits (715), Expect = 5e-74, Method: Composition-based stats. Identities = 97/242 (40%), Positives = 147/242 (60%), Gaps = 2/242 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLDE 60 +E++YG +V A L+ + V++ + R D R L L+ A ++ G VI + + LD+ Sbjct: 90 AELLYGKQSVLAALQNS-RPLNRVWLTEKLRYDPRFLRLLDAAKAGGAVIDIVEPRRLDQ 148 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + G HQG+ A+ + +L + P LL DG+ DPHNLGA +RSA+A G Sbjct: 149 LTAGGNHQGVAAQAAAHPYVEFEELIASLVERPDPVLLAADGIEDPHNLGALIRSAEAFG 208 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +I+P+ R+ + AT KVA GA E +P+ RVTNL + + L+E +VGT +A Sbjct: 209 FQGIILPQRRAVGVTATVAKVAAGAVEHLPIARVTNLNQAIERLKEAGYQVVGTQEKASQ 268 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 LY+ K+ G L +V+G+EG+G+ LT+ HCD ++SIP+AG +SLN SVA GI L+E +R Sbjct: 269 ALYELKLDGPLVVVVGSEGKGISLLTQRHCDHMVSIPLAGKTTSLNASVAGGIMLYEVMR 328 Query: 241 QR 242 QR Sbjct: 329 QR 330 >UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSH6_DESOH Length = 256 Score = 279 bits (714), Expect = 7e-74, Method: Composition-based stats. Identities = 102/242 (42%), Positives = 142/242 (58%), Gaps = 1/242 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKR-LLPLIHALESQGVVIQLANRQYLDE 60 SE +YGIH V A + + +FI GRE ++ + A E + + + L++ Sbjct: 7 SETLYGIHPVMAAITAGRRKVDTLFIASGRETRQPHQQALQAAEQHNIPVNEIPARDLEQ 66 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + G VHQGI ARV DL + S D PF+L+ DG+TDPHNLGA R+A AG Sbjct: 67 MTGGKVHQGIAARVSVYPFVPLADLLAAVPSTDTPFILVADGLTDPHNLGALARTALCAG 126 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VH +I+PKD +A A K + GA E +P+ R TN+AR + L++ +WI G G + Sbjct: 127 VHGLIIPKDNAASPTPAAVKASAGALEFLPVARETNIARVLDALKDAGLWIAGLDGRGEQ 186 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 T+Y S +TG LALV+G EG G+RRL + CD ++SIP V SLN SVA + ++EA R Sbjct: 187 TIYDSDLTGPLALVVGDEGRGIRRLVGQKCDFILSIPQTDMVHSLNASVAGAVAMYEAFR 246 Query: 241 QR 242 QR Sbjct: 247 QR 248 >UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ2_THICR Length = 244 Score = 278 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 114/240 (47%), Positives = 157/240 (65%), Gaps = 2/240 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 + +YGIHA++ L+++P + KG +KR+ L+ + G+ QL + + ++ Sbjct: 4 QQLYGIHAIEKFLKQSPHLIYSLTFQKGPVNKRVQSLMDQAKRMGIAYQLEPKSFFNKLE 63 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 VHQG++A V E DL L+ + P L LD V DPHNLGA LR+ADA GV Sbjct: 64 G--VHQGVVATVAKEADLNETDLKALLEAESNPLFLFLDEVQDPHNLGAILRTADATGVT 121 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AV++PK S +NAT +KVACGAAE+V ++ V+NL RT++ LQ+ +W+ G AGE + TL Sbjct: 122 AVVIPKHNSVGVNATVRKVACGAAETVKVVVVSNLVRTIKELQQAGLWVTGLAGETNTTL 181 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 YQ G + LVMGAEG G+R+LTRE CD L +IPMAGS+ SLNVSVATG+ L+E RQR Sbjct: 182 YQLDFKGAVGLVMGAEGSGLRKLTRETCDHLAAIPMAGSIESLNVSVATGVVLYEVYRQR 241 >UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y2_ACIC5 Length = 270 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 100/244 (40%), Positives = 139/244 (56%), Gaps = 4/244 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRED----KRLLPLIHALESQGVVIQLANRQYL 58 +++YG+H V+ L +F V + + R+D ++L ++ S+GV ++ NR+ L Sbjct: 2 DVLYGLHPVEEALRAGSRKFDHVCVSRERQDHGAAQKLQRIVDLCRSEGVRLRFENREQL 61 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 + HQG++A V+ DL A LL LDGV DP NLGA LRSAD Sbjct: 62 TRMAKTHAHQGVVAVVRERSFLTIEDLMAAPADGHPHLLLALDGVEDPQNLGALLRSADG 121 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AGV V++P+ RSA L+A A K + GAAE + + RV NL R + L+E+NIW VG Sbjct: 122 AGVDGVLLPERRSAPLSAVAVKTSAGAAEHIRIARVVNLVRALEQLKEQNIWCVGLDERG 181 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + T +V+G EGEG+ L R+ CD L+ IPMAG VSSLNVS A + L+EA Sbjct: 182 TMSYDAYDWTTPSVVVLGREGEGLHDLVRKTCDHLVRIPMAGGVSSLNVSAAGAVVLYEA 241 Query: 239 VRQR 242 RQR Sbjct: 242 ARQR 245 >UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lactobacillales RepID=Q1J4P0_STRPF Length = 257 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 88/241 (36%), Positives = 136/241 (56%), Gaps = 3/241 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++++YG+HAV L+ +++I + K++ + + V I ++ L + Sbjct: 19 NDIVYGVHAVTESLQAN--TGNKLYIQEDLRGKKVDNIKSLATQKKVAISWTPKKTLSQM 76 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 +DGAVHQG + RV +++ ++ P +LILDG+TDPHNLG+ LR+ADA V Sbjct: 77 TDGAVHQGFVLRVSAFAYTDVDEILEIAEQEANPLILILDGLTDPHNLGSILRTADATNV 136 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+PK RS + K + GA E +P+ RVTNL++T+ L+ WI GT + Sbjct: 137 CGVIIPKHRSVGVTPVVSKTSTGAVEHIPIARVTNLSQTLDKLKARGFWIFGTDMNGTPS 196 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 G+LALV+G EG+G+ ++ DE+I+IPM G V SLN SVA I ++E R Sbjct: 197 DC-WNTNGKLALVIGNEGKGISTNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRN 255 Query: 242 R 242 R Sbjct: 256 R 256 >UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2HJX9_PEPMA Length = 244 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 89/241 (36%), Positives = 145/241 (60%), Gaps = 2/241 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 + + G + V LE ++I KG + + G+ ++ +++Y+++ + Sbjct: 2 QYLVGRNPVMEALEMD-MGVTNIYIQKGELKGFIKKIEKKAYDMGIRVEYVDKKYIEKFA 60 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAAGV 121 + HQG++A++ +++ +++ PFL+ILD +TDPHNLG+ +R+A+ AG Sbjct: 61 ENTAHQGVMAKMPSFGYSSVDEMIIYAKKINEDPFLIILDEITDPHNLGSIIRTAEVAGC 120 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H VI+PK R+ ++NATA K + GA ++ + RVTN+ T+ L+E NIWI G GEA T Sbjct: 121 HGVIIPKHRACEVNATAIKTSAGAVFNIKIARVTNITTTINYLKEHNIWIYGACGEASQT 180 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 Q+ + G + LV+G EG+G+ RL RE+CD+LI IPM G SLN S A I ++E +RQ Sbjct: 181 HTQANLKGPIGLVIGNEGKGISRLVRENCDQLIKIPMYGKTESLNASNAASILIYEIIRQ 240 Query: 242 R 242 R Sbjct: 241 R 241 >UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86 Tax=Bacteria RepID=YACO_BACSU Length = 249 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 95/242 (39%), Positives = 143/242 (59%), Gaps = 3/242 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 + + G +AV L+ + ++++ + + +I + QG+ IQ R+ LD+ Sbjct: 6 DYVIGKNAVIETLKSD-RKLYKLWMAENTVKGQAQQVIELAKKQGITIQYVPRKKLDQMV 64 Query: 63 DGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 G HQG++A+V + +DL +QPF LILD + DPHNLG+ +R+ADA G Sbjct: 65 TGQ-HQGVVAQVAAYEYAELDDLYKAAEEKNEQPFFLILDELEDPHNLGSIMRTADAVGA 123 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H +++PK R+ L T K + GA E +P+ RVTNLART+ ++E IW+VGT A Sbjct: 124 HGIVIPKRRAVGLTTTVAKASTGAIEHIPVARVTNLARTLEEMKERGIWVVGTDASARED 183 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 LALV+G+EG+GM RL +E CD LI +PMAG V+SLN SVA G+ ++E R+ Sbjct: 184 FRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRK 243 Query: 242 RS 243 R+ Sbjct: 244 RN 245 >UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4B9_NATTJ Length = 247 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 88/242 (36%), Positives = 135/242 (55%), Gaps = 3/242 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G + V + R + ++I K ++ + + + LD+ Sbjct: 6 LVPGKNPVVEAI-RGNRKVFRIYISKDSNKNFQDEMLKLAQQHNINLDKVPLDRLDKMVP 64 Query: 64 GAVHQGIIARVKPGRQYQEND-LPDLIASLDQPF-LLILDGVTDPHNLGACLRSADAAGV 121 HQGI+A +P + Q + L + +P LLILD +TDP N GA +R+ADA GV Sbjct: 65 TTEHQGIVAETEPFKYSQLDTVLKGFDYNNQKPLTLLILDHLTDPQNFGAIIRTADAVGV 124 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+PK RS +N T K + GAAE VP+I+V+NL +T+ L+E+ IWI+GT + D Sbjct: 125 DGVIIPKRRSVDVNPTVMKASSGAAEHVPIIKVSNLRQTISKLKEQWIWILGTDIDGDRG 184 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +++ LALV+G E GM L ++ CD + +IPM G V+SLN SVAT + L+E RQ Sbjct: 185 IFEENYNIPLALVVGNEASGMSPLVKKECDFIANIPMIGRVNSLNASVATAVVLYEIYRQ 244 Query: 242 RS 243 ++ Sbjct: 245 KT 246 >UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=49 Tax=cellular organisms RepID=RLMB_XYLFT Length = 249 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 166/243 (68%), Gaps = 1/243 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++ I GI+AV + +E E +EV + ++ RLL + +G+ ++ Q LD Sbjct: 5 NQWIVGINAVVSSIENDAEHVREVLVEAASKNSRLLDIEENARRKGIEVRRVTTQALDGV 64 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 G HQG+ AR R ++E+DL DL+ A+ Q LL+LDGV DPHNLGACLRSA AAG Sbjct: 65 GGGVRHQGVAARYAAVRLWEEHDLKDLVDAAGGQALLLVLDGVQDPHNLGACLRSAAAAG 124 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V AVI+PKD+S +NAT +K + GAA+ +P+I V NLAR++R LQ++++WI G AGE + Sbjct: 125 VTAVIIPKDKSVGINATVRKTSSGAADRLPVIAVVNLARSLRELQKQDVWIYGLAGEVET 184 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +LY + G +ALV+G E +G+RRLTREHCD L IPM G V SLNVSVA G+ LFEAVR Sbjct: 185 SLYALDLRGNVALVLGGEADGLRRLTREHCDVLARIPMPGEVESLNVSVAAGVTLFEAVR 244 Query: 241 QRS 243 QR+ Sbjct: 245 QRT 247 >UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8RFN1_9FIRM Length = 241 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 84/243 (34%), Positives = 137/243 (56%), Gaps = 4/243 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M++ +YG + V+ALL ++ E+ + G DK L + + + ++ +R+ +D Sbjct: 1 MTQYVYGKNVVKALLA-DKKKVYEIILSDGFRDK---ELEQEIRKRKIPCKVNSRKKMDT 56 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 G+ HQGI A++ + Y +L + P ++LD + DPHNLGA LR+ D G Sbjct: 57 MFSGSNHQGIAAKIDDYKTYTIEELVAGVPKGKTPLFVMLDELEDPHNLGAILRTCDCVG 116 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V VI+ K R +L T KV+ GA ++V + VTNLA+T++ L++E W+ G + Sbjct: 117 VDGVIIGKHRGVKLTPTVAKVSTGAIDTVKVAVVTNLAQTLKGLKKEGFWVAGADFDNSQ 176 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 Q+ L LV+G+EG G+ L +++CD + +PM GSVSSLN SVA + L++ Sbjct: 177 DYRQASYDMPLVLVVGSEGFGISPLVKKNCDFFVRLPMEGSVSSLNASVACAVLLYQIYA 236 Query: 241 QRS 243 QR+ Sbjct: 237 QRN 239 >UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH Length = 244 Score = 276 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 88/239 (36%), Positives = 139/239 (58%), Gaps = 2/239 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I G + V ++ +++FI +G K++ +I + +Q A + +LD+K+ Sbjct: 4 IEGRNPVIEAIKSG-RTIKKIFIQEGVRGKKVDRIIKEASRFNIPLQKAKKDFLDKKARS 62 Query: 65 AVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGIIA + ++ ++ + PF++ILD V DPHNLGA +R+A AAG H Sbjct: 63 HSHQGIIAMADDIKYVSPREMVEIAREKGEDPFIIILDQVQDPHNLGAIIRTAYAAGAHG 122 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I P+ RSA + K + GA +PL +V+N+ T+ L++ +WI GT Y Sbjct: 123 LIYPRKRSADITPVVTKASAGAVNHLPLAKVSNINYTIADLKDMGLWITGTDVRGTRPYY 182 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + G + LV+G EG+GMRRL +E+CD +++IPM+G + SLN SVA G+ +FE VRQR Sbjct: 183 SADYKGPVGLVIGNEGKGMRRLVKENCDFVVNIPMSGELGSLNASVAAGVVIFEVVRQR 241 >UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Firmicutes RepID=B8G1U5_DESHD Length = 246 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 97/241 (40%), Positives = 146/241 (60%), Gaps = 3/241 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E++YG +AV LL+ ++ + R ++ +Q + Q ++ LD + Sbjct: 4 EIVYGRNAVWELLQSGK-PVNKLLLQGEGTAGRFQDIVSHARAQKIPFQFVDKAALDRLT 62 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + A HQGI+A V P + +D+ L + PF+L+LD V DPHNLGA +R+ADAAGV Sbjct: 63 EKAKHQGILAYVAPREYAEVDDILALAGEKGEDPFILVLDEVEDPHNLGALIRTADAAGV 122 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H VI+PK RS L AT K + GA E V + RV NL +T++ LQ+ W+ G E Sbjct: 123 HGVIIPKRRSVSLTATVAKTSAGAVEHVLVARVGNLVQTLKDLQKAGCWVSGAEAEGTE- 181 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +Y+S +TG +V+G+EG+G+ RL +E CDE++S+PM G ++SLN SVA I ++E +RQ Sbjct: 182 VYRSDLTGARVIVIGSEGKGLSRLVKETCDEIVSLPMKGRINSLNASVAGSILMYEVLRQ 241 Query: 242 R 242 R Sbjct: 242 R 242 >UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=A4XJ85_CALS8 Length = 253 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 134/239 (56%), Gaps = 2/239 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I G + V+ L + + EV+I +DK + +I+ + +G+V++ ++ +D+ S Sbjct: 4 IEGKNPVKEAL-NSSTQITEVYISNTTKDKSISEIINLCKQKGIVVKFVDKSKIDKMSKT 62 Query: 65 AVHQGIIARVKPGRQYQENDLP-DLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QG+IA + + + +DL + ++PFL++LD +TDPHN G+ +RSA G H Sbjct: 63 KNPQGVIAIAQEYKYWDIDDLLLEAANKGEKPFLVLLDEITDPHNFGSIIRSAHLCGAHG 122 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I S + T +K + GA E + + RV NL RT+ L+E+ +W+ A+ +Y Sbjct: 123 IITEARNSCPITPTVEKASAGAIEHIKVARVVNLRRTIDSLKEKGVWVYAADNNAEKFVY 182 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + +++G+EG+G+ RL +E D L+ IP G ++S N SVA GI FE ++QR Sbjct: 183 DCDFKIPICIIIGSEGKGISRLVKEGADFLVKIPQKGKINSYNASVAAGIIFFEVLKQR 241 >UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Deltaproteobacteria RepID=Q1NS81_9DELT Length = 302 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 100/250 (40%), Positives = 142/250 (56%), Gaps = 14/250 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +++GIH V LL R P +++++ GR+D R+ ++ S + + +R L + Sbjct: 47 LVWGIHPVTELLRRRPGLVRKLYLAGGRDDGRVAAIVELAASHRIPL---DRAGLPPAAA 103 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLI-----------ASLDQPFLLILDGVTDPHNLGAC 112 HQG+ ARV P +L + A+ P LL+LD + DPHNLGA Sbjct: 104 ELPHQGVAARVAPPSPLSLAELLQRLPALGPAPASSPAAGPPPLLLVLDSLQDPHNLGAV 163 Query: 113 LRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV 172 LRSA A GV VI+PKDRSA L+ T K A G A + + R TNLA + L++ WI Sbjct: 164 LRSAAAFGVDGVILPKDRSAPLSGTVLKAAAGTAALLDICRTTNLAGALGTLKKHGFWIY 223 Query: 173 GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATG 232 G +GEA LY++ TG LV+G E +G+R L ++HCD L++IP+A V SLNVSVA G Sbjct: 224 GASGEASGNLYETDFTGPTCLVLGNEQKGIRPLLKKHCDFLLAIPLAAGVESLNVSVAAG 283 Query: 233 ICLFEAVRQR 242 I L E R++ Sbjct: 284 IMLAEIRRRQ 293 >UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Desulfuromonadales RepID=A1APM1_PELPD Length = 251 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 93/242 (38%), Positives = 146/242 (60%), Gaps = 8/242 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E+++G++ V+ L R +++ D RL ++ +GV + R+ L Sbjct: 4 ELVFGVNPVREAL-RGKREIFGLYVQSTATDHRLDKILELARERGVRVIRREREDLTRMC 62 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQ----PFLLILDGVTDPHNLGACLRSADA 118 + HQG+ +V P + DL DLI + D+ FLL+LDG+ DPHNLGA +R+A Sbjct: 63 GSSHHQGMALKVAP---FSYADLDDLIEAGDREDAAGFLLVLDGIQDPHNLGALIRTAAC 119 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AG V++P+DR+ + A+K + GA E++ + +VTN+A+++ L+ W+ G +GEA Sbjct: 120 AGASGVVIPRDRACAITPAAEKASAGAVETITVAQVTNIAQSLEKLKRSGYWVYGLSGEA 179 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 D +LY+ +G++ALV+G EGEG+R L R+ CD L+SIP+ G V SLN SVA GI L+E Sbjct: 180 DASLYEVAFSGKIALVIGGEGEGIRPLVRKQCDALVSIPLYGGVGSLNASVAGGIALYEV 239 Query: 239 VR 240 R Sbjct: 240 AR 241 >UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Gammaproteobacteria RepID=A1AWI4_RUTMC Length = 247 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 111/242 (45%), Positives = 156/242 (64%), Gaps = 1/242 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S +I HAVQA L+ P F +VFIL R DKRL L + G+ +Q + LD+ Sbjct: 4 SIIITSFHAVQAQLKSNPTCFIKVFILNKRCDKRLNTLTSEFNNFGISVQRCTKIQLDKL 63 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAAG 120 S+ HQG+ A + + +L ++ LD F+LILD + DP NLGACLRSA+AAG Sbjct: 64 SNHQTHQGVAAEILLPTLPDQGELISYVSKLDNAGFILILDSIQDPRNLGACLRSANAAG 123 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VH V++ K+ SA +N+ K + GA + + +VTNL+RT++ LQ++NIW++G G + Sbjct: 124 VHCVVINKNGSAPINSLVHKTSAGALNQLKIFQVTNLSRTIKALQQKNIWVIGLDGSVNI 183 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++YQ +T A++MGAEG G+RRLT++ CD+L IPM G V SLNVSVATG+ LFE R Sbjct: 184 SIYQIDLTIPNAIIMGAEGSGLRRLTKQSCDQLAKIPMQGKVESLNVSVATGVTLFEVNR 243 Query: 241 QR 242 QR Sbjct: 244 QR 245 >UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=2 Tax=Candidatus Blochmannia RepID=RLMB_BLOFL Length = 254 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 123/244 (50%), Positives = 174/244 (71%), Gaps = 2/244 (0%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MSE++YGIH V++++ ++P R V+I+ D RL LI+ + + IQ R+ L+ Sbjct: 1 MSELVYGIHTVESIVNQSPNRILIVYIVSNPRDLRLKSLIYRIRKMNINIQECTRRVLNI 60 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ--PFLLILDGVTDPHNLGACLRSADA 118 KS + HQGIIA V P E+ L + + + P LL+LDG+TDPHNLGAC+RSADA Sbjct: 61 KSMKSAHQGIIAEVIPMPALNEDYLLHFLKTKNNIIPLLLVLDGITDPHNLGACIRSADA 120 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AGVH +IVP+DRSA +NAT +KVA G+++ VP +RVTNL+RT+++L++ NI+IVG+ + Sbjct: 121 AGVHMIIVPRDRSANVNATVRKVASGSSDRVPFVRVTNLSRTLKLLKKYNIYIVGSVLRS 180 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + L+ +++ +ALVMG+E G+RRLTRE+CD+L+ IP S SLNVSVATGI LFE Sbjct: 181 NQILFNTRLIDPIALVMGSESSGIRRLTRENCDKLVHIPTLQSTVSLNVSVATGIFLFET 240 Query: 239 VRQR 242 VRQR Sbjct: 241 VRQR 244 >UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes RepID=B0K5F8_THEPX Length = 247 Score = 273 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 85/245 (34%), Positives = 146/245 (59%), Gaps = 5/245 (2%) Query: 1 MSE--MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 M E +I+G + V ++ E +++++ K + +I+ + G+V+ + L Sbjct: 1 MEEQNVIFGRNPVIEAIKSGKE-IEKIYVSK-TAGGNISKIINFAKEAGIVVSTTDNDTL 58 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIA-SLDQPFLLILDGVTDPHNLGACLRSAD 117 E + HQG++A + ++ +DL + ++PFLLILD +TDPHNLGA +RSA+ Sbjct: 59 SELAGSRNHQGVVALSAVYKYFEVDDLLEYAEQKKEKPFLLILDEITDPHNLGAIIRSAE 118 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A GVH +I+PK R+ +NAT K + GA E + + +V+N+ T+R L+E +WIVGT Sbjct: 119 AFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNINNTIRDLKERGLWIVGTDVN 178 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 A+ + + +A V+G EG+G+ +L ++CD ++ IPM G ++SLN SVA I +++ Sbjct: 179 AEKSFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQ 238 Query: 238 AVRQR 242 V +R Sbjct: 239 VVSKR 243 >UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteria RepID=Q1D7V2_MYXXD Length = 282 Score = 273 bits (698), Expect = 5e-72, Method: Composition-based stats. Identities = 91/243 (37%), Positives = 145/243 (59%), Gaps = 2/243 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLL-PLIHALESQGVVIQLANRQYLDE 60 S +YG++ V A L P+ + +F+++G+ R L+ G+ ++ R+ L Sbjct: 34 SRFVYGVNPVLAALRARPDEVERLFLVEGQLGARAAGELLSRAREFGIRVEKVTRERLGT 93 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAA 119 ++G VHQG++ ++ + + DL + +L QP +++LDG+ DPHNLGA +RSADA Sbjct: 94 LAEGGVHQGVVVELRGFKYAELEDLLEAAKALGQPPLVVVLDGIQDPHNLGAIIRSADAL 153 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G H V++ KDR+ Q+ T K + GA E + RV N++R + L+E +W+ +A Sbjct: 154 GAHGVVIAKDRAVQVTGTVAKASAGAVEHSRIARVVNISRALEELKEAGLWVAAADVDAK 213 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 ++ +++ G LALV+GAEG G+R +HCD + IPMAG V SLN SV+ GI L+E Sbjct: 214 EPMWSARLDGPLALVVGAEGAGVRDGVLKHCDFRLRIPMAGQVGSLNASVSAGILLYEVA 273 Query: 240 RQR 242 RQR Sbjct: 274 RQR 276 >UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Moraxellaceae RepID=RLMB_ACIAD Length = 248 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 116/242 (47%), Positives = 161/242 (66%), Gaps = 2/242 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E YG+H+V++LLE PER +F LKGR+D+RL ++ E G+ +Q A+R L++ + Sbjct: 5 EYYYGVHSVESLLELEPERVLTLFTLKGRDDQRLQKILELAEPFGISVQKASRDSLEKLA 64 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG++A V+P E DL L+ + DQ LL LD VTDPHNLGAC+R+A A G+ Sbjct: 65 GLPFHQGVVAAVRPHPVLNEKDLDQLLQNNDQALLLALDQVTDPHNLGACIRTAAAMGIA 124 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI-WIVGTAG-EADH 180 AVIVP+DRSA L TA+KVA G AE V I+VTNLART+ ++ +VGT E Sbjct: 125 AVIVPRDRSASLTPTARKVAAGGAEKVKFIQVTNLARTLAHIKAHFFVKVVGTMLDEKAL 184 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + + +G +A+VMGAE G+R +T+ CD+ + IPM+G++ SLNVSVA G+ L+EA R Sbjct: 185 PIQKYDFSGNVAIVMGAEDTGLRPITQSQCDQTVYIPMSGNLQSLNVSVAAGMALYEACR 244 Query: 241 QR 242 QR Sbjct: 245 QR 246 >UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli RepID=Q1G8Z2_LACDA Length = 255 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 138/242 (57%), Gaps = 2/242 (0%) Query: 2 SEMIYGIHAVQALLE-RAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 ++ ++G HA L+ + E+ +VF+ +G ++ + + + ++IQ + LD+ Sbjct: 12 NDFVFGRHAGIDFLKTQDSEKINKVFLAEGVQEDFAREVYRYAKKKHLIIQRVPKNKLDK 71 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + G HQG++ V + L D + + P LL+LD + DPHNLG+ LRSADA G Sbjct: 72 LTGGENHQGLVLAVASFEYADFDQLLDKLDQEEAPLLLMLDNIEDPHNLGSILRSADATG 131 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V VI+PK R++ L + K + GA + VP+ RV NL +T + L++ WI GTA E D Sbjct: 132 VSGVIIPKRRASGLTSVVAKTSTGAIDHVPVARVNNLVQTCQALKDRGYWIFGTAMEGD- 190 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + G+ LV+G EG+G+ L + D+ ++IPM G V SLN SVATG+ L++A Sbjct: 191 DYRKWNANGKTVLVIGNEGKGISPLLLKQMDQTLTIPMIGHVQSLNASVATGVLLYQAFN 250 Query: 241 QR 242 R Sbjct: 251 SR 252 >UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC37_HELMI Length = 256 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 91/240 (37%), Positives = 139/240 (57%), Gaps = 4/240 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +++ G V L+ ++ + KG + + ++ +G+ I R LD + Sbjct: 11 DLLAGRQPVMEALKSG-RAINKLVVAKGAREGSIREILGMARDRGIPITELERTVLDREV 69 Query: 63 DGAVHQGIIARVKPGRQYQEND-LPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 HQGIIA V P + + L A + PF+L+LDG+ DPHN+GA LR+A+ AG Sbjct: 70 --RHHQGIIAHVAPVAYVEVEEILEKAKAKGEPPFVLLLDGLEDPHNIGALLRTAEGAGA 127 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H VI+PK R + +T K + GA E VP+ RVTNL +T+ L++ +WI+G+A +A Sbjct: 128 HGVIIPKRRGGAITSTVAKASAGAVEYVPIARVTNLVQTVGQLKKAGLWIIGSAMDAPRP 187 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 ++ G + L++G+EG+G+ L REHCD L+SIPM G V SLN SVA + ++E VRQ Sbjct: 188 YFRQDFRGPVGLIVGSEGKGISPLLREHCDHLVSIPMGGKVDSLNASVAGALLMYERVRQ 247 >UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase n=10 Tax=Bacilli RepID=TRMHL_STAHJ Length = 249 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 86/244 (35%), Positives = 136/244 (55%), Gaps = 4/244 (1%) Query: 1 MSEM-IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLD 59 M ++ I G HAV+ + +++I +G +++ ++ + Q +++Q + LD Sbjct: 1 MEDIVIVGRHAVKEAIVSG-HTINKIWIQEGIRKQQINDILQNAKEQKLIVQTVPKSKLD 59 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADA 118 + A HQG+ A + P + + ++ILDG+ DPHNLG+ LR+ADA Sbjct: 60 NLA-NAPHQGVAALIAPYEYADFDQFIQSQKDKEGLSTVVILDGLEDPHNLGSILRTADA 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 +GV VI+PK RS L T K + GA + VP++RVTNLA+T+ L+E W+ G + Sbjct: 119 SGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVMRVTNLAKTIDELKEHGYWVAGAEADN 178 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 LA+V+G+EG+GM RL ++ CD I IPM G V+SLN SVA + ++E Sbjct: 179 ATDYRDMAADMPLAIVIGSEGQGMSRLVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEV 238 Query: 239 VRQR 242 R+R Sbjct: 239 YRKR 242 >UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMK8_9FIRM Length = 282 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 98/242 (40%), Positives = 146/242 (60%), Gaps = 8/242 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 I G ++V L + ++VFI G++D RLL L E GV + LD ++ Sbjct: 47 FIGGRNSVLESLRAG--QVKKVFIKSGKKDGRLLALAEEAERLGVAAIETEERTLDRLTE 104 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQ--PFLLILDGVTDPHNLGACLRSADAAGV 121 G HQG+ A +KP Y DL ++++S ++ P L++LDGV D N+GA +R+A+ AG Sbjct: 105 GVRHQGVAASLKP---YAYADLEEVLSSCERKDPLLILLDGVEDVRNIGAIVRTAECAGA 161 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AV++PK RS+ + A A K A GA +P+ ++ N+ +T+ L+E W VG + Sbjct: 162 AAVLLPKHRSSPVTAAAMKTASGAFAYLPVCQIGNIRQTLEKLKERGFWAVGADMDGG-D 220 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 LYQ+ + G L +VMGAEG+G+ LT+ CD + IPM G VSSLNVSVA + ++EAVRQ Sbjct: 221 LYQADLKGPLVIVMGAEGKGISPLTKRMCDFCVRIPMRGKVSSLNVSVAAALLMYEAVRQ 280 Query: 242 RS 243 R+ Sbjct: 281 RN 282 >UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A6BKK3_9FIRM Length = 265 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 87/241 (36%), Positives = 132/241 (54%), Gaps = 3/241 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +I G +AV ++++L G +D + +I ++ + L++ S Sbjct: 25 NIIEGRNAVMEAFRSGK-PVDKLYVLDGCQDGAVRSIIREARKHDTILNFVEKDRLNQLS 83 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIA-SLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + HQG+IA V + D+ L + PFL+ILD + DPHNLGA +R+A+ AG Sbjct: 84 ETGKHQGVIASVAAYEYAEVEDMLKLAEEKGEDPFLIILDNIEDPHNLGAIIRTANQAGA 143 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H VI+PK R+ L AT + + GA P+ +VTNL +TM L+++ +W V + D Sbjct: 144 HGVIIPKRRAVGLTATVARTSAGALNYTPVAKVTNLVKTMEDLKKKGLWFVCADMDGD-V 202 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +Y M G + LV+G EGEG+ RL ++ CD IPM G + SLN SVA G+ +E VRQ Sbjct: 203 MYDVNMKGPIGLVIGNEGEGVGRLVKDTCDFTARIPMKGDIDSLNASVAAGVLAYEIVRQ 262 Query: 242 R 242 R Sbjct: 263 R 263 >UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEV3_DESAA Length = 249 Score = 271 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 82/241 (34%), Positives = 139/241 (57%), Gaps = 2/241 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +E++YG+H V+ L +FQ V++ + R + ++ +G+ ++ ++ + + Sbjct: 3 TELLYGMHPVREALLAGKRQFQAVYVSESRTGEGKEDILSLARERGIEVKTPDQSFFKGQ 62 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 G QG+ ARV + L F L++D + DP N GA +R+A AGV Sbjct: 63 DRGG--QGVAARVSLFKPIALELLVKKAGGEQPLFFLLMDEINDPQNCGALMRTALCAGV 120 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 + VI+P RS+ L+ K + GA E +P+ RV NL R+M+ L+++ +W G A T Sbjct: 121 NGVIMPDKRSSPLSPAVSKASAGALEHMPVARVVNLVRSMQYLKDQGVWFFGLDARASGT 180 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 ++++ +TG A+V+G EG+G+R L R+ CD+L+SIP AG + SLN SVA + ++E +RQ Sbjct: 181 VWEADLTGPAAVVVGNEGKGLRPLVRKECDQLVSIPQAGPLGSLNASVAGALSMYEVMRQ 240 Query: 242 R 242 R Sbjct: 241 R 241 >UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyanobacteria RepID=A2C1X9_PROM1 Length = 442 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 90/242 (37%), Positives = 140/242 (57%), Gaps = 3/242 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++I+G H+ +A L ++ R + L+ ++ GV+++ + L + Sbjct: 177 DLIWGRHSTEAALV-GGRAIHRIWCTSELRSTPKFFQLLKDQKASGVLVEEVSWSRLGQL 235 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDL-IASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 ++GAVHQGI+ ++ + +L D A D LL LDG+TDP NLGA +RSA+A G Sbjct: 236 TNGAVHQGIVLQIAASKTLDLKNLIDACKAFGDSSLLLALDGLTDPQNLGAIIRSAEALG 295 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +I+P+ RSA L + KVA GA E +P+ RV NL R++ L++E +VG A E Sbjct: 296 AQGLILPQRRSAGLTGSVAKVAAGALEHLPVARVVNLNRSLEKLKDEGYTVVGLAEEGSS 355 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 TL + K G L +V+G+E +G+ +TR CD+L+ IP+ G +SLN SVAT I L+E R Sbjct: 356 TLSEIKFQGPLVVVVGSEDKGISLITRRLCDQLVRIPLKGVTTSLNASVATSIFLYEVAR 415 Query: 241 QR 242 + Sbjct: 416 SK 417 >UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQ81_SYNAS Length = 249 Score = 269 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 89/243 (36%), Positives = 139/243 (57%), Gaps = 7/243 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E+IYG++ ++ L E + + +GR + + + + +G+ +++ R +LD+ + Sbjct: 2 EVIYGVNPLREALISGGEGVTRIVVARGRSESSISEIRTLAKQRGIPVEIRERSFLDDLA 61 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQP----FLLILDGVTDPHNLGACLRSADA 118 A HQG++ Y+ DL +IA+ +LILDG+ DPHNLGA +RSA Sbjct: 62 GHASHQGVLGVCTA---YRYQDLDAVIANRHPSCPYDLVLILDGILDPHNLGALIRSAHC 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G + +I+P+ R+A + T K + GAA +P+ RV NLAR + L+ + WI G A Sbjct: 119 FGANGIILPERRAASVTGTVIKTSAGAARHIPIARVANLARALDELKTKGFWIFGADARA 178 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 D ++ G + LVMG E +G+R L R+ CD+LISIPM G + SLNVSV+ GI L E Sbjct: 179 DQSVSDPDYQGAVGLVMGGESKGLRPLIRKKCDDLISIPMLGKIDSLNVSVSGGIILHEI 238 Query: 239 VRQ 241 R+ Sbjct: 239 RRK 241 >UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJH8_9GAMM Length = 251 Score = 269 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 118/236 (50%), Positives = 152/236 (64%), Gaps = 1/236 (0%) Query: 7 GIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAV 66 GIHAV A+L+ APER + + + G + L L+ +++G+ ++ A R LD+ G Sbjct: 15 GIHAVAAVLQHAPERVRLLQLASGTLEPALAQLLEQAQARGISVERAGRDKLDQHHPGFQ 74 Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 HQG+I P +E L + + +L+LDGVTDPHNLGACLR+ADAAG A++ Sbjct: 75 HQGVIVHCAPRPVVEEKALVQRVRNG-LDLVLVLDGVTDPHNLGACLRTADAAGAGAIVT 133 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 P+ SA L A KVA GAAE+VP++ V NLART+ L++ +W VG G A LY Sbjct: 134 PRHHSAALTPAAIKVASGAAETVPVVAVGNLARTLAALKDAGMWTVGLDGAAHEDLYAVD 193 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + A+VMGAEGEGMRRLTRE CD L IPM G+V SLNVSVATGI LFEA RQR Sbjct: 194 LRPPTAIVMGAEGEGMRRLTREACDHLARIPMGGTVESLNVSVATGITLFEARRQR 249 >UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine bacterium EB0_41B09 RepID=A4GI27_9BACT Length = 246 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 116/240 (48%), Positives = 157/240 (65%), Gaps = 1/240 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 IYG H++ + + P +E+FI + R D R+ L+ +++ V L+ + LD G Sbjct: 7 IYGFHSITSQIRLDPLVVKEIFIDEARSDGRVNDLMKIIKANEVKFHLSTKDRLDGMVSG 66 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQPFL-LILDGVTDPHNLGACLRSADAAGVHA 123 HQG++A V+ + + + D+P L LILDGV DP NLGAC R ADA GV A Sbjct: 67 NKHQGVVALVREAQNKYVTVEDIIEENYDKPLLFLILDGVVDPQNLGACFRVADAMGVDA 126 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I PKD + LNAT +KVACG AESVP + VTNLART+R L+ N+++ GT A+ +L Sbjct: 127 LICPKDNAVGLNATVRKVACGGAESVPFVVVTNLARTIRYLKNSNVFVYGTDDNANKSLQ 186 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 ++ G +ALVMG+EG+GMRRLT E CD++ SIPM G V SLNVSVA+GICL+E RQRS Sbjct: 187 KTNFKGSIALVMGSEGKGMRRLTNELCDDIFSIPMMGQVESLNVSVASGICLYEINRQRS 246 >UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXE5_DESAC Length = 244 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 142/240 (59%), Gaps = 3/240 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS+ ++G++AV L + + +++ + + + RL ++ + V ++ R+ LD+ Sbjct: 1 MSQYLFGLNAVFEALGQG-RKVVALYV-EAQRNPRLEEIVAQATERHVAVKQCERRQLDK 58 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 HQG++A+VK L + ++ F LILDG+TDPHN GA +RSA AAG Sbjct: 59 MVGDVRHQGVVAQVKAQDFVSLAQLLAQSSQSER-FFLILDGITDPHNFGALIRSAAAAG 117 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VI KDRS + +K A G V L +VTNL R + L++ +W+ G AGE Sbjct: 118 CQGVIFAKDRSCPVTGIVEKTAAGTLGYVQLCQVTNLGRAIEELKKAGVWVYGLAGEEGQ 177 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +L+++ ++ +ALV G+EG G+R L R+ CD LI+IPM G V SLNVSVATGI LFE VR Sbjct: 178 SLFEAPLSAPIALVAGSEGRGIRPLIRKLCDGLIAIPMPGRVESLNVSVATGIALFEVVR 237 >UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase n=86 Tax=Firmicutes RepID=TRMHL_STAAC Length = 248 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 89/244 (36%), Positives = 135/244 (55%), Gaps = 4/244 (1%) Query: 1 MSE-MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLD 59 M + +I G HAV+ + ++ I +G + +++ ++ + Q +++Q + LD Sbjct: 1 MEDTVIVGRHAVREAIITG-HPINKILIQEGIKKQQINEILKNAKDQKIIVQTVPKSKLD 59 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPF-LLILDGVTDPHNLGACLRSADA 118 + A HQG+ A + P + + +LILDG+ DPHNLG+ LR+ADA Sbjct: 60 FLA-NAPHQGVAALIAPYEYADFDQFLKQQKEKEGLLTVLILDGLEDPHNLGSILRTADA 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 GV VI+PK RS L T K + GA E VP+IRVTNLA+T+ L++ W+ GT Sbjct: 119 TGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWVAGTEANN 178 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + LA+V+G+EG+GM RL + CD I IPM G V+SLN SVA + ++E Sbjct: 179 ATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIPMVGHVNSLNASVAASLMMYEV 238 Query: 239 VRQR 242 R+R Sbjct: 239 FRKR 242 >UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria RepID=Q3AXD9_SYNS9 Length = 652 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 94/241 (39%), Positives = 142/241 (58%), Gaps = 3/241 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++I+G HA QA LE ++ + R + L L+ ++ GV+++ L + Sbjct: 290 DLIWGRHASQAALESG-RPIHRIWCTPEMRSAPKFLQLLREAKTSGVLVEEVTWARLAQV 348 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSADAAG 120 + G+VHQGI + + L + + L + P LL LDG+TDPHNLGA +RSA+A G Sbjct: 349 TGGSVHQGIALQTAAADTLDLSALIEGCSELGEPPLLLALDGITDPHNLGAVVRSAEAMG 408 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 H +++P+ RSA L +A KVA GA E +P+ RV NL R++ L++ ++G A E D Sbjct: 409 AHGLVLPQRRSAGLTGSAAKVAAGAMEHLPVARVVNLNRSLEKLKDSGYRVIGLAAEGDV 468 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 TL + G L LV G+E +G+ LTR HCD+L+ IP+ G SLN SVAT +C++E R Sbjct: 469 TLMDVDLEGPLVLVTGSEDQGLSLLTRRHCDQLVRIPLRGITPSLNASVATALCVYEVAR 528 Query: 241 Q 241 + Sbjct: 529 R 529 >UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Proteobacteria RepID=A1WUS8_HALHL Length = 271 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 116/239 (48%), Positives = 160/239 (66%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG HA + P + V++ GR D RL L+ L QGV ++ +R+ LD+ ++ Sbjct: 25 LVYGQHAAREAAAYDPAGVEAVWVEHGRRDARLERLLDKLGRQGVTVERVHRRVLDQMAE 84 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G HQGI+ R E +L DL+ + +P LL+LD V DPHNLGAC+RSA AAG H Sbjct: 85 GGNHQGIVLRYSGTPARGEGELADLVDAEPEPLLLVLDRVQDPHNLGACMRSAAAAGAHG 144 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V+ P+DR+A L+ K A GA + +P +VTNLART++ L++ + +VG AGEA+ + Y Sbjct: 145 VVAPRDRAAALSPAVHKTAAGAVQRIPFFQVTNLARTLQQLRDAGVHVVGAAGEAEKSCY 204 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + G LALV+G EGEG+RRLTRE CDE ++IPM GS+ SLNVSVA G+ LFEAVRQR Sbjct: 205 EVDLRGPLALVLGGEGEGLRRLTRERCDERVAIPMPGSMESLNVSVAAGVLLFEAVRQR 263 >UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Acidithiobacillus RepID=B5EQA2_ACIF5 Length = 255 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 118/243 (48%), Positives = 156/243 (64%), Gaps = 7/243 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 E +YGIHAV A L+ E E+++ + R D+R+ PL+ Q + +Q L Sbjct: 3 KESLYGIHAVSAALDA--EELLELWVAVERRADERIAPLVQKAAEQRLPVQEWRSVALGR 60 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAA 119 K + HQG+ + R + D ++A L+ FLL+LDGV DPHNLGACLRSA+AA Sbjct: 61 KLNTDRHQGVGGLL---RAFPGQDFEAILAQLNGCGFLLVLDGVLDPHNLGACLRSAEAA 117 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 GV AVI+P+D + +NAT +K + G+A VP+ VTNL+RT+ LQE W+VG AGE Sbjct: 118 GVDAVILPRDNACPVNATVRKASAGSASRVPVCTVTNLSRTLSSLQEAGFWLVGMAGEGS 177 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 +LY + L +VMG E +G+RRLTREHCD L IPM G++ SLNVSVATGICLFEA Sbjct: 178 RSLYALDLDMPLVMVMGGEEKGLRRLTREHCDYLAHIPMMGAIESLNVSVATGICLFEAA 237 Query: 240 RQR 242 RQR Sbjct: 238 RQR 240 >UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes RepID=Q724H1_LISMF Length = 251 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 89/241 (36%), Positives = 139/241 (57%), Gaps = 3/241 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E I G + V +L ++++ +G + L ++ + + + +Q +Q +++ Sbjct: 8 EWIGGRNPVLEVLRSD-RDIHKIYVQEGSQKGVLKQVLTLAKERKIQVQFVPKQKIEKVV 66 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAAGV 121 GA HQG+ A+V + + +DL + D+ PF +ILD + DPHNLG+ +R+AD+ G Sbjct: 67 SGA-HQGVAAQVAAYQYAELDDLFAAAEAKDEMPFFIILDELEDPHNLGSIMRTADSVGA 125 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H +I+PK RS L T K + GA E VP++RVTN+ RTM LQ+ +WI GT + Sbjct: 126 HGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTNMVRTMEELQKRGLWIFGTDAKGSSD 185 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + LA+V+G+EG GM L RE CD L+ +PM G V+SLN SVA + L+E R+ Sbjct: 186 YRTMDVDMPLAIVIGSEGFGMSCLVREKCDFLVHLPMRGKVTSLNASVAASLLLYEVYRK 245 Query: 242 R 242 R Sbjct: 246 R 246 >UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NV68_9BACL Length = 271 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 137/240 (57%), Gaps = 3/240 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E+I G +A+ ++ E ++ +G E RL + + ++ Q ++ LD Sbjct: 31 KEVIAGRNAILEAIKSGRE-INKILFQEGIEKGRLKSIFAIANEKKIICQEVPKRKLDN- 88 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 S HQG+IA V P ++ +++ + + LLILD + DPHNLGA +R+A+A+GV Sbjct: 89 STTERHQGVIAYVAPYSYFELDEVVNNLEINKDTTLLILDHIEDPHNLGAIIRTAEASGV 148 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADH 180 A+I+PK R+A ++ TA K + GA E +P+IRV+NL ++ L+E+ WI GT E Sbjct: 149 KAIIIPKRRAAVVSQTAVKASAGAIEHMPVIRVSNLTDAIKKLKEKGFWIAGTTLAERSE 208 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + LA+V+G EGEGM ++ CD L +PM G + SLN SVA GI ++E ++ Sbjct: 209 DYTKIAKDVPLAIVIGNEGEGMSKVVTNECDFLYHLPMLGKIQSLNASVAAGIIMYERIK 268 >UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH n=1 Tax=Paulinella chromatophora RepID=B1X411_PAUCH Length = 526 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 141/242 (58%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLDE 60 ++I+G H+ QA LE ++ + + L L+ +++ V+++ + L + Sbjct: 190 KDLIWGRHSTQAALESG-RPIHRIWCTSEVKSSSKFLQLLKKVKASSVLVEEVSWARLGQ 248 Query: 61 KSDGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 G+ HQGI ++ L D + P L+ ++G+TDPHNLGA +RSA+A Sbjct: 249 LIGGSGHQGIALQMAAVETLDLTKLIEDCCHLGENPLLMAVEGLTDPHNLGAIVRSAEAL 308 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G H +I+P+ R+A L + KVA GA E +P+ RV NL R++ +L+++ IVG A E D Sbjct: 309 GAHGLILPQRRNAGLTGSVAKVAAGALEHLPVARVVNLNRSLDILKDKGYRIVGLATEGD 368 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 +L ++ + G L +V G+EG G+ LTR +CD+LI IP+ G+ SLN SVA+ + L+E Sbjct: 369 VSLTEADLNGPLVIVTGSEGNGLSLLTRRYCDQLIRIPLRGATPSLNASVASALMLYEVA 428 Query: 240 RQ 241 R+ Sbjct: 429 RR 430 >UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase n=7 Tax=Staphylococcaceae RepID=TRMHL_STAEQ Length = 249 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 89/244 (36%), Positives = 137/244 (56%), Gaps = 4/244 (1%) Query: 1 MSEM-IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLD 59 M ++ I G HAV+ + ++ I G + +++ ++ +SQ +++Q + LD Sbjct: 1 MEDIVIVGRHAVKEAIISG-HAINKILIQDGIKKQQINDILKNAKSQKLIVQTVPKSKLD 59 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADA 118 + A HQG+ A V P ++ + ++ILDG+ DPHNLG+ LR+ADA Sbjct: 60 FLA-NAPHQGVAALVAPYEYANFDEFLQKQKKKARYSTVIILDGLEDPHNLGSILRTADA 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 +GV AVI+PK RS L T K + GA + VP+IRVTNL++T+ L++ WI GT Sbjct: 119 SGVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVTNLSKTIDELKDNGFWIAGTEANN 178 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + L +V+G+EG+GM RL + CD I IPM G V+SLN SVA + ++E Sbjct: 179 ATDYRDLQADMSLGIVIGSEGQGMSRLVSDKCDFHIKIPMVGHVNSLNASVAASLMMYEV 238 Query: 239 VRQR 242 R+R Sbjct: 239 YRKR 242 >UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bacteria RepID=Q31LC0_SYNE7 Length = 519 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 101/242 (41%), Positives = 150/242 (61%), Gaps = 3/242 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E+IYG HAV A L+ +++ + R + L LI A ++ G V+ + + + Sbjct: 242 ELIYGRHAVLAALQ-GNRTLNRIWVTPRLRYESTFLELIDAAKAGGAVVDEVPVERIRQL 300 Query: 62 SDGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 +DGAVHQGI A+V P + +DL A+ P +++ DG+TDPHNLGA +R+A+A G Sbjct: 301 TDGAVHQGIAAQVAPYPYQELSDLIAQAKAATTDPVIVVADGITDPHNLGAIIRTAEALG 360 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 H +++P+ R+ + A KVA GA ES P+ RV NL R + L++ WI G AGEA Sbjct: 361 AHGLVIPQRRAVGVTAAVAKVAAGALESFPVARVVNLNRALEELKDAGFWIYGAAGEAKQ 420 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +++++ +G + LV+G+E EG+ LTRE CD LISIP+ G +SLN SVA G+ L+E R Sbjct: 421 SIHETSFSGPVVLVVGSEDEGLSLLTRERCDHLISIPLRGKTNSLNASVAAGMVLYEVSR 480 Query: 241 QR 242 QR Sbjct: 481 QR 482 >UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12 Tax=Chlorobiaceae RepID=B3QM30_CHLP8 Length = 257 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 81/240 (33%), Positives = 132/240 (55%), Gaps = 1/240 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +++YG +AV LL+ PE +++++ +L ++ + A + L S Sbjct: 17 QVVYGRNAVIELLQSKPESVEKIYLQFNTSHPKLKEIVITARRLKIPCGKARMEKLTLIS 76 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 A +QG+ A + Y +++ P L+IL G+ DPHN+GA +R+A+A Sbjct: 77 GTAKNQGVCALLTSVTFYTLDEVL-AAPRNSSPLLVILQGLEDPHNVGAIIRTAEAVAAD 135 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +VI+ + + A ++AT K + GA + + +V +L +T+ +L E IV EA+H Sbjct: 136 SVIMIEGKGAPISATVHKASAGALSHMRVCKVKSLVKTLDLLHERGFSIVAADMEAEHNH 195 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 LVMGAEG+G+ TR+ CD+++ IPMAG V SLNVSVA G+ L+EA+RQR Sbjct: 196 TDIDWKRPTVLVMGAEGKGLGSETRKRCDQIVRIPMAGCVESLNVSVAAGVMLYEAMRQR 255 >UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WGA5_9SYNE Length = 365 Score = 263 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 86/241 (35%), Positives = 136/241 (56%), Gaps = 3/241 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFI-LKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++IYG HAV+A +E +++ K D PLI ++ G V+ L + Sbjct: 97 DLIYGRHAVEAAIEAG-RSLNRLWVNAKLHYDSHFRPLIATAKANGSVVDEVENVRLSQM 155 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSADAAG 120 + GA HQGI+A+V L + +P ++ DG+TDPHNLGA +RSA+A G Sbjct: 156 TQGASHQGIVAQVSAYEYVDLEVLVQQAKNKARRPVIVAADGITDPHNLGAIIRSAEAIG 215 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +++P+ R+ + +T KV+ GA E++P+ RV NL R + L+ + WI G EA Sbjct: 216 AQGIVIPQRRAVGVTSTVAKVSAGALENIPIARVINLGRALEYLKSNSFWIYGLTAEAAQ 275 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +++ + + + LV+GAEG G+ + CD+L+SI ++G SLN SVATG+ L+E R Sbjct: 276 SIHTTDFSAPVVLVVGAEGSGLSLSVQNLCDQLVSIELSGKTPSLNASVATGMALYEIYR 335 Query: 241 Q 241 Q Sbjct: 336 Q 336 >UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P8C0_9FIRM Length = 256 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 90/243 (37%), Positives = 138/243 (56%), Gaps = 5/243 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKG--REDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++ G +AV LL+ P + ++I + + ++ + V ++ + + LD Sbjct: 14 LVLGRNAVIELLK-GPREVECIYICDDVPARGQPISRIVALAKEARVPVKRVDVRRLDTL 72 Query: 62 SDGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 ++G HQG+ A+ +L A + P L+I D + DPHNLGA +R+A+AAG Sbjct: 73 ANGLNHQGVAAQAAAFHYCTVEELFARAAARGEPPLLVIADSIEDPHNLGAIIRTAEAAG 132 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 H +I+PK A L A + + GA E +P+ RVTNL T++ L+ +WI G Sbjct: 133 AHGLIIPKRGGAGLTAIVGRTSAGAVEHLPVARVTNLVSTIKELKARGVWIYGADASGAR 192 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 Q+ +TG ALV+G+EG G+ RL RE CD L+S+PM G V+SLN SVA GI ++EAVR Sbjct: 193 -WDQTDLTGPSALVIGSEGFGLSRLVRETCDALLSLPMRGEVNSLNASVAAGILMYEAVR 251 Query: 241 QRS 243 QR+ Sbjct: 252 QRT 254 >UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTZ2_ALIAD Length = 255 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 96/242 (39%), Positives = 143/242 (59%), Gaps = 6/242 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++++ G HAV A LE +V++ +G + ++ S+GVV+Q R LDE Sbjct: 20 ADLVKGRHAVLAALESE-RPVNKVWVAEGASG--MDAIVAKARSRGVVVQFVPRSRLDEM 76 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + HQG+IA+V P +D+ P +++LD + DPHN GA LR+A+A+G Sbjct: 77 AS--AHQGVIAQVAPYAYVDLDDVIRRDTGF-APLVVVLDEIADPHNFGAILRTAEASGA 133 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 V++ K R AQ+ K A GA E++P+ RV N+A+ ++ L++ WIVG EA Sbjct: 134 QGVVIGKRRQAQVTDVVAKAAAGALETLPVARVANVAQALQRLKQAGYWIVGADVEAKVP 193 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + G A+V+G+EG+GMRR RE CD L+SIP+ G V SLN SVA G+ L+EAVRQ Sbjct: 194 YTEVDYRGPTAVVIGSEGQGMRRWVREQCDFLVSIPILGRVQSLNASVAAGVLLYEAVRQ 253 Query: 242 RS 243 R+ Sbjct: 254 RA 255 >UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIN0_9FIRM Length = 245 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 85/244 (34%), Positives = 133/244 (54%), Gaps = 4/244 (1%) Query: 1 MSE--MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 M E MI G V L + + + KG K + ++ + V ++ ++ L Sbjct: 1 MEEKRMIEGRRPVMEALRAG-TKITRILLQKGSRGKPVDDILALAKEYSVKVEYLDKAAL 59 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 D+++ HQG++A P R D+ A PFL++LD + DPHNLGA +R+A A Sbjct: 60 DKRATSRNHQGVMAETPPFRYTPFADIL-AKAGDKPPFLVLLDHIQDPHNLGALIRTAYA 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AG +I+P+ R+AQ+ A + A GAAE +P+ +V NLAR + ++ +W+ G + Sbjct: 119 AGCDGIIIPERRAAQMTPAAVRTAAGAAEYLPVAKVVNLARCLDECKDAGLWVYGADMDG 178 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + G LV+G+EGEG+ RL +E CD L+ +PM G V+SLN SVA + ++E Sbjct: 179 ESVYTTGDYQGGTVLVIGSEGEGLGRLVKEKCDHLVQLPMQGKVASLNASVAGALLMYEV 238 Query: 239 VRQR 242 RQR Sbjct: 239 YRQR 242 >UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVP7_9PROT Length = 247 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 107/246 (43%), Positives = 154/246 (62%), Gaps = 6/246 (2%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS ++ GIHAV+ L+ + E+ I KG+ RL LIH + + ++ L Sbjct: 1 MS-VLAGIHAVKHALDAG-DSIDELLIEKGKHHPRLNELIHLAKKHSIRFSFVPKEALAR 58 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLD---QPFLLILDGVTDPHNLGACLRSAD 117 ++G HQG++A++ + ++D P +L+LD VTDPHNLGAC+R+A+ Sbjct: 59 LAEGVPHQGVVAKMVAAGAQAVPTFEAWLKTVDMETAPMVLLLDQVTDPHNLGACVRTAE 118 Query: 118 AAGVHAVIVPKDRSAQL-NATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 AAG AVIV KD +A + + K ACGA +P++RV N+ R + LQ++ W VG AG Sbjct: 119 AAGCAAVIVLKDHAADVHSPVVAKAACGALSRLPVLRVINMKRCIEQLQQQGFWTVGLAG 178 Query: 177 EADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 EA+ ++Y +K++G A+VMG+E +G+RRL RE CD+LI IPM G V SLNVSVATG+ LF Sbjct: 179 EAELSIYDAKLSGATAVVMGSEDKGVRRLVRETCDQLIHIPMPGVVESLNVSVATGVALF 238 Query: 237 EAVRQR 242 E RQR Sbjct: 239 EINRQR 244 >UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Thermotogaceae RepID=A9BJB6_PETMO Length = 240 Score = 259 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 143/240 (59%), Gaps = 6/240 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDK-RLLPLIHALESQGVVIQLANRQYLDEKS 62 IYG + ++ ++E A + +F + ++ L ++ + + G + + L++ + Sbjct: 2 YIYGKNILKEIIE-ARYPVKHIFFSSSKTERGSLKEIVEDVANLGYSYSFSPNEVLEKMA 60 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQGI+ + +Y+ D+I ++ FL+ILD + DPHN GA +R++ AAGV Sbjct: 61 LTNKHQGIVIDIGNDFKYEN---LDIIEGKEKLFLVILDQIQDPHNFGAIVRTSVAAGVD 117 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+I+PKD + ++ KV+ G +P+I+VTNL+ T+ L++EN+W+ G E Sbjct: 118 AIIIPKDNAVEVTPVVIKVSSGQIFKIPIIKVTNLSNTIETLKKENVWVYGADVEG-KPY 176 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 Y+ G++ LV G EG G+R+ + HCDEL+SIPM +V SLNVSV++GI LFEA +QR Sbjct: 177 YEIDWQGKICLVFGNEGNGIRKNVKNHCDELVSIPMFNNVESLNVSVSSGIILFEAKKQR 236 >UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BF70_9FIRM Length = 239 Score = 259 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 82/241 (34%), Positives = 133/241 (55%), Gaps = 10/241 (4%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 + + IYG V ++ + + F++K + K + +I L V I ++++ D+ Sbjct: 5 LMDKIYGRKPVIDAIDSG-VKIYKAFVIK-QNSKIVEEIIAKLNKANVEINFVDKRFFDK 62 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 HQG++ + DL L+ILD + DPHNLGA +RSA++ G Sbjct: 63 IE--LNHQGVMVEAESFEYKDLRDLDKYQR------LIILDQIEDPHNLGAIIRSAESFG 114 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VI+P+ RSA ++ K + GA ++ +I V N R + ++E W+ G AGEA Sbjct: 115 FDGVIIPERRSASVSPIVYKTSAGAINNINIIMVKNTNRAIEEIKEAGFWVYGLAGEASS 174 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + Q + G++ L++G EG+G+ RL RE+CD LI+IPM G V+SLN SVA+ I ++E +R Sbjct: 175 PIDQVDLKGKVCLIVGNEGKGLSRLVRENCDILINIPMKGFVNSLNASVASAIAMYEVLR 234 Query: 241 Q 241 Q Sbjct: 235 Q 235 >UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C951_9FIRM Length = 242 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 91/245 (37%), Positives = 136/245 (55%), Gaps = 6/245 (2%) Query: 1 MS--EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 MS E + G +AV+ L+ +++I + D L+ +I +S+G+ IQ N L Sbjct: 1 MSNYEKVIGRNAVRETLKAG-RNVNKLYISEN-HDSGLVSIIKMAKSKGISIQKTNNHKL 58 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPD-LIASLDQPFLLILDGVTDPHNLGACLRSAD 117 D S HQG++A P +L + + + +P ++ILD +TDPHN GA +RSA Sbjct: 59 DSMSGSTHHQGVLALCSPVETISLRELIEKMNEKVTKPLVVILDNITDPHNAGAIIRSAY 118 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 AG VI+ RSA + K + GA E + L V+N+A+T+ L++E +++VG Sbjct: 119 CAGADGVIMQTRRSASIGEGMYKSSAGAIEHIDLCEVSNIAQTIDTLKKEGLFVVGLDMN 178 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 + Y LALV+GAEG+G+ RL +E CD + SIP+ SLN SVA GI LFE Sbjct: 179 GE-NYYDMDYDMPLALVVGAEGKGLGRLIKEKCDFISSIPLKNDFDSLNASVAAGIVLFE 237 Query: 238 AVRQR 242 AV+ R Sbjct: 238 AVKTR 242 >UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0H0_9FIRM Length = 272 Score = 258 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 88/241 (36%), Positives = 132/241 (54%), Gaps = 3/241 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G HA+ ++ + + G + L G+++ R LD Sbjct: 27 ILAGRHAIIEAIKAG-RGINRILLADGVRGSGVNELRDLAREHGIMVDTVGRSKLDALVS 85 Query: 64 -GAVHQGIIARVKPGRQYQEND-LPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 HQG +A V P + + A + P LL+LDG+ DP NLGA LR+ADAAGV Sbjct: 86 QDVRHQGAVAYVAPVAYVAVEEVIAGARARGEDPLLLLLDGIEDPQNLGALLRTADAAGV 145 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H +++P+ S L T +V+ GA E VP+ R+ N+A+T+R L+E+ WI G + Sbjct: 146 HGILLPRRHSVPLTETVARVSAGALEYVPVARIGNIAQTIRALKEQGFWIAGADMGGEEI 205 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 ++ +TG L LV+G+EG GM RLTR+ CD + +PM G ++SLN SVA I ++EA RQ Sbjct: 206 YDRANLTGALVLVIGSEGRGMSRLTRDLCDFTVRLPMMGKINSLNASVAGAILMYEAQRQ 265 Query: 242 R 242 R Sbjct: 266 R 266 >UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TM87_9BACT Length = 269 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 89/239 (37%), Positives = 130/239 (54%), Gaps = 3/239 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++ +G +AV ++LE P +++++ G + L+ V + AN YLDE Sbjct: 28 KDLCWGRNAVISMLETVPSACKKIYLATGIQTTFRDDLLSLAGKNAVEVTEANGSYLDEI 87 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + G HQGI+A + + DL LL +D V DPHN GA +R+A+A G Sbjct: 88 TGGEKHQGIVANIDLPKP---RDLSQFSPKKGPSLLLAMDHVKDPHNFGAMIRTAEAVGA 144 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI P RS + T K + GAA VPL VTNL R+M +L++E W+VG E Sbjct: 145 LGVIYPSRRSVGVTGTVIKTSAGAAFRVPLYEVTNLVRSMEILKKEGYWVVGLDHEEPRD 204 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++ S + +L L++G+EGEG+ RL+ E CD+L IPM G SLN SVA + +FE R Sbjct: 205 IWSSPLPDKLVLMVGSEGEGLSRLSSERCDDLRRIPMVGKTGSLNASVAAALGMFEWRR 263 >UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Anaerococcus RepID=C7REQ2_ANAPD Length = 234 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 90/239 (37%), Positives = 141/239 (58%), Gaps = 10/239 (4%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 + IYG V L+ + + +ILK + K + +I L + + I ++++ D+ Sbjct: 2 DKIYGRKPVLDTLDTDI-KVYKAYILK-QNSKLVDKIIDKLNQKNIEISFVDKRFFDKI- 58 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG++ V+ + D L+ILD + DPHNLGA +RSA++ G Sbjct: 59 -DMNHQGVMLEVESFKYSSLE------DLSDSSRLIILDKIEDPHNLGAIIRSAESFGFD 111 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AVI+P+ RSA + +T K + GA ++ ++RVTNL RT++ L+++ WI G AGEA + Sbjct: 112 AVIIPERRSASVTSTVYKTSAGAINNIKVVRVTNLTRTIKDLKDKGFWIYGLAGEAHSDI 171 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + + G++ LV+G EGEG+ RL RE+CD LI+IPM G V+SLN SVA I ++E +RQ Sbjct: 172 SHADLRGKVGLVVGNEGEGISRLVRENCDMLINIPMLGRVNSLNASVAAAISMYELLRQ 230 >UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Deinococci RepID=Q1IWR8_DEIGD Length = 246 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 7/240 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG + V L R EV + +G E+ + +L++ V ++ A R LD+ + Sbjct: 2 LLYGRNPVLEALRDG--RVTEVLVARGVEE----AFVRSLKAFDVRLRFAPRIELDQLAG 55 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLIL-DGVTDPHNLGACLRSADAAGVH 122 HQG+IA V+ +D+ D + + L++L DG+TDP N GA +RSA+ G H Sbjct: 56 TTQHQGVIAEVEDLAWATVDDILDRAEARGEDLLIVLLDGITDPRNFGAIIRSAEVLGAH 115 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 V+V + RSA L+ K A GA +P+ + NL R + L+E+ +WI G AGEA + Sbjct: 116 GVVVEERRSAPLSPVVVKTAAGATSYLPVAQTKNLPRLIDALKEDGVWIYGAAGEAAQDI 175 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++ ++G++ALV+GAEGEG+RRL RE CD L+ IP G V SLN SVA GI L+EA R R Sbjct: 176 GRTDLSGKVALVIGAEGEGLRRLVREKCDALVRIPTRGQVQSLNASVAAGILLYEAARAR 235 >UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella RepID=B0TZ81_FRAP2 Length = 248 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 116/246 (47%), Positives = 157/246 (63%), Gaps = 4/246 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLAN--RQYL 58 MS +IYGIHAV +L+E + VF K + ++ +I ES+G+ + + +Q Sbjct: 1 MSSLIYGIHAVDSLVEANQAKEILVF-KKSNANHKIESIIAKAESKGLKVTFIDSFKQLP 59 Query: 59 DEKSDGAVHQGIIA-RVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSAD 117 A HQ I A + + Y END+ +LI F+LILD V DPHN GAC+RSA Sbjct: 60 GRVRKDANHQNIFAIEINDFKTYSENDIENLIPQDKNAFILILDNVQDPHNFGACIRSAH 119 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 +AG+ +I+PKD SA +NAT KKVACGAAE ++ VTNLAR + L++ +WI+G AGE Sbjct: 120 SAGIDFIIIPKDNSAPVNATVKKVACGAAEHTKIVVVTNLARAIEKLKQLGVWIIGLAGE 179 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 A+ +LY + +A+V GAEG GMR+ T+ CD L +PM G VSSLNVSVATGI L+E Sbjct: 180 ANDSLYSMNLADSVAIVAGAEGSGMRQRTKASCDFLAKLPMLGEVSSLNVSVATGIALYE 239 Query: 238 AVRQRS 243 VRQR+ Sbjct: 240 TVRQRA 245 >UniRef50_C0QBT7 RNA methyltransferase (TrmH family protein, group 3) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBT7_DESAH Length = 253 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 137/241 (56%), Gaps = 1/241 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E++ GIH ++ L +F + + K R RL ++ + Q + +++ + LD + Sbjct: 9 EILCGIHPIREALRAGRRKFYAILVSKDRSRARLAEILGVAQEQSIPVEITDTMTLDALT 68 Query: 63 DGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 D A HQG+ ARV P + + + + F+L+++ + DP N GA +R+A AGV Sbjct: 69 DNARHQGVAARVSPFATVRAEGIVKQMPKGVSNRFILVIETLEDPQNFGALIRTALCAGV 128 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +++PK+RSA + + + + GA E + +TN A +R L+ W+ G G+ Sbjct: 129 DHIMIPKERSASPSPSVSRASAGAMEHAEISLITNTAGLLRQLKAMGFWVAGLDGQGTTP 188 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L+ + +TG L LV+G E +G+R L ++ CD L+S+P+ V+SLN SVA GI ++EA+RQ Sbjct: 189 LFSADLTGNLVLVVGGEHKGIRPLVKKECDFLVSLPIKAGVTSLNASVAGGIAMYEALRQ 248 Query: 242 R 242 R Sbjct: 249 R 249 >UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2I4_ERYRH Length = 236 Score = 256 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 89/243 (36%), Positives = 138/243 (56%), Gaps = 9/243 (3%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS I+G + V A L+ + KG ++ + QG+ +Q ++ LD+ Sbjct: 1 MSNYIFGKNTVTAYLKSGQKPKNLYLFNKGN----YQEIVALAKEQGIRVQFVDKFRLDK 56 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 +DG VHQG++ + + Y+ + L ++I +++ D + DPHNLGA LR+ DA G Sbjct: 57 MADG-VHQGVVIEI---QDYKYHSLQEIIKGAKNNLIVLCDQLEDPHNLGAILRTCDACG 112 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V V+V K RS L +T KV+ GA +V + TN+ + + L+E W+V D Sbjct: 113 VDGVVVGKHRSVGLTSTVAKVSTGAINTVKVAEATNMVKAIAELKEAGYWVVAAENAVDA 172 Query: 181 TLY-QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 Y + + L LV+G+EG+G+ RL ++ CD L +IPM GSV+SLNVSVATG+ LF+ V Sbjct: 173 VDYTEFNVDMPLVLVVGSEGKGISRLVKKECDILTTIPMQGSVNSLNVSVATGVLLFDIV 232 Query: 240 RQR 242 R+R Sbjct: 233 RRR 235 >UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT15_9FIRM Length = 234 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 123/240 (51%), Gaps = 6/240 (2%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS IYG V L+ + ++++ + ++ + + + V+I ++ LD+ Sbjct: 1 MS-YIYGRGPVIEALKNN--KVDKIYLA--SHEGSIIKIKAMAKEKKVLISSLSKDRLDK 55 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + G HQG++A V +L D + LLILD + DPHNLGA RSA Sbjct: 56 MAPGKNHQGVVALVSGYEYKDFQELLDENKDKKEFRLLILDKMEDPHNLGAIARSALFFN 115 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +I+PK R A +N T K + GA ++V + +VTNL++T+ L++ WI E D Sbjct: 116 FDGIIIPKHREALVNDTVYKTSQGAVDNVNICQVTNLSQTIEKLKKAGFWIYAALLEGD- 174 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + +G++A+++G EG+G+ + D + IP SLN SVA GI ++E +R Sbjct: 175 NIKDVDFSGKVAIIIGNEGKGISDNLIKASDFKVKIPNLSEFDSLNASVAAGIIMYEVIR 234 >UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Fusobacteriaceae RepID=D1AP92_SEBTE Length = 234 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 77/241 (31%), Positives = 131/241 (54%), Gaps = 9/241 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E I G++AV+ L+ + +++ I KG R+ ++ + + I +++ Sbjct: 2 EKIIGLNAVREALD-GSKNIEKIEIYKGTNKDRIRDILSKASKKNIKIFYTDKRQ----- 55 Query: 63 DGAVHQGIIARVKPGRQYQE-NDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 QGI A V Y E N+ + + + + +L+LD + DP N GA +RSA+ GV Sbjct: 56 --ENSQGIAALVSEYDYYLELNEFLEKVLAKQRSIVLVLDQIQDPRNFGAIIRSAECFGV 113 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +I+ S + T K + GA E V +I+VTN++ +M L++ +I G + + Sbjct: 114 DGIIIQDRNSVSVTETVVKSSTGAIEHVDIIKVTNVSDSMDKLKKYGYFIYGAEADGETE 173 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 Y +L LV+G+EG+GMR+ +EHCD++++IPM G ++SLNVSVA GI L E + Sbjct: 174 YYNEPFPEKLCLVLGSEGKGMRKKVKEHCDKILNIPMHGKINSLNVSVANGILLAEISKN 233 Query: 242 R 242 + Sbjct: 234 K 234 >UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococcus marinus RepID=Q7TU91_PROMP Length = 428 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 83/235 (35%), Positives = 128/235 (54%), Gaps = 3/235 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGR-EDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + I+G H+V A L + ++ ++ L+ L+S+GV+I+ L + Sbjct: 189 DWIWGKHSVFAAL-NSERPINRIWCTSEIFSSEKFYLLLKDLKSKGVLIEEVPWSRLSQL 247 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRSADAAG 120 + GAVHQG+ + L D+ S P ++ LDGVTDPHN GA +RSA+A Sbjct: 248 TSGAVHQGVALQHASTESISLEKLIDISKSKSSNPIIVALDGVTDPHNFGAIIRSAEAFD 307 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +IVP+ RSA L T KVA GA E +P+ RV NL R + L+++ I+G +G+ Sbjct: 308 CKGIIVPQRRSAGLTGTVAKVAAGALEHIPVSRVVNLNRAIDELKKKGFIIIGLSGDGQV 367 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + + K + +++GAE +G+ L ++ CD L+ IP+ G SSLN SVA I L Sbjct: 368 PISEFKEKAPVVVIVGAENKGISLLVQKKCDYLLKIPLKGKTSSLNASVAAAISL 422 >UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Thermotogaceae RepID=C5CF29_KOSOT Length = 250 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 126/243 (51%), Gaps = 4/243 (1%) Query: 4 MIYGIHAVQALLERAPERFQE---VFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 ++G + ++ +L+ P++ + +F + D+ L L +G +++ + L Sbjct: 2 YLHGRNVLREILKLEPKKLKIKKVLFTDQKNVDRELEELKEHTAKKGYRMEVVPPEKLFN 61 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 S HQG++ +K L D I + L++LD + DPHNLGA +RS+ AAG Sbjct: 62 LSREKKHQGVVINLKEFPYTSLETLLDKIMEKKRSLLVLLDRIQDPHNLGAIIRSSVAAG 121 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VI+ + S ++ KV+ G +P++RV N+ART+ L+EE W E + Sbjct: 122 ADGVIITEKASVEVTPAVVKVSTGLVFRIPIVRVVNMARTIETLKEEGFWTYAATMEGE- 180 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 Y T + AL+ G EG+G+R L ++ D L+SIPM + SLNV+ + I LFE R Sbjct: 181 PYYSVSFTDKAALIFGNEGKGIRHLVKKKSDYLVSIPMCEGIDSLNVAASAAIMLFEYRR 240 Query: 241 QRS 243 Q + Sbjct: 241 QWA 243 >UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A6L4B5_BACV8 Length = 255 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 127/242 (52%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +EMI+G+ AV ++ E +V + K + + L L++ + +Q + ++ Sbjct: 5 NEMIFGVRAVIEAIQAGRE-IDKVLVKKDIQSELSKELFACLKNTLIPVQRVPVERINRI 63 Query: 62 SDGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + HQG++A + + DL P L P ++LDG+TD N GA R+ + AG Sbjct: 64 TR-KNHQGVVAFISSVTYQKTEDLVPFLFEEGKTPLFVMLDGITDVRNFGAIARTCECAG 122 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 A+I+P S +NA A K + GA ++P+ R NL T++ L++ IV + D+ Sbjct: 123 ADAIIIPSKNSVSVNADAMKTSAGALHTLPVCREQNLTNTIKYLKDCGFKIVAATEKGDY 182 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++ + ++MGAE G+ CDE I IP+ G + SLNVSVA GI ++EAV+ Sbjct: 183 DYTKANYKDPVCIIMGAEDTGVPYEHLSLCDEWIKIPLMGKIESLNVSVAAGILIYEAVK 242 Query: 241 QR 242 QR Sbjct: 243 QR 244 >UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9X3_9GAMM Length = 243 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 106/236 (44%), Positives = 147/236 (62%), Gaps = 4/236 (1%) Query: 7 GIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAV 66 GIH VQ LL +++ ++ K L L+ +++GV ++ ++ G Sbjct: 9 GIHTVQQLLADG--HVLRLYVADNKKSKNLTALVGEAQARGVPVETVALYEIEMMLPGVR 66 Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 HQG+ A + Q D D IA +++P LL+LD + DPHNLGACLRSA AAGVHAV++ Sbjct: 67 HQGVAAVSEARGQA--ADWADAIAGVEKPLLLVLDSIQDPHNLGACLRSAAAAGVHAVLI 124 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 P R+A + +KVACGA E +PL RV+NL R + +Q + IW+VG AG A +LY + Sbjct: 125 PNSRAADVTPVVEKVACGATEILPLFRVSNLRREVERMQRQGIWVVGGAGGAAQSLYATD 184 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 +T LA+++G EGEG+R RE CD L+ IPMA + SLNVSVA G+ LFEA RQR Sbjct: 185 LTVPLAVIVGNEGEGIRHGLREQCDFLVQIPMAEGMESLNVSVACGVMLFEARRQR 240 >UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8A8_9BACT Length = 269 Score = 254 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 89/238 (37%), Positives = 135/238 (56%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ +G + V LLE PE ++VF+L G +D+ + + + R+ L+ S Sbjct: 22 DLCWGRNPVLTLLEHRPELCRKVFLLAGAQDEFRDTVARLCADGRIPLDFVEREELERLS 81 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 GAVHQG+ ARV P + + D + +++LD DPHNLGA +R+A+ AG Sbjct: 82 GGAVHQGVAARVAPIPPADLDGVVDALDPQAPALIVLLDHCQDPHNLGAVIRTAEVAGAA 141 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 V+ DRSA +N T K + GAA +P+ +V N+ R + L+ + W+VG D T+ Sbjct: 142 CVVCQNDRSATVNGTVVKTSAGAAFRLPVAQVVNVGRAVERLKRKGFWVVGLDHRTDETV 201 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + S + RLALV+G+EGEG+ LT + CD L+ PMAG +LN SVA + +FE VR Sbjct: 202 WSSALPERLALVVGSEGEGISALTAKKCDMLVKFPMAGRTGNLNASVAAALGMFEWVR 259 >UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alcanivorax RepID=Q0VMF8_ALCBS Length = 251 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 116/242 (47%), Positives = 155/242 (64%), Gaps = 6/242 (2%) Query: 7 GIHAVQALLERAPERFQEVFILK---GREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 G HAV+ALL PE E+F+ R+D RL L+ A + G+ IQ A R+ L++ + Sbjct: 9 GFHAVEALLRHRPEAVLELFVQDTRADRDDPRLAALMQAAKDFGIAIQRARREVLEKHAG 68 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRSADAAGVH 122 QGI+AR +P R E+ L + +P LL+L+ VTDPHNLGACLRSADAAGV Sbjct: 69 PQN-QGIVARARPRRPLDESALLQWLDGKPAKPLLLVLENVTDPHNLGACLRSADAAGVQ 127 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA-DHT 181 AVIVP+ +A L A + A GAAES+ + NLA + L++ +W+VGTA E + Sbjct: 128 AVIVPRRNAAGLTPVACRTAVGAAESLAYYEIGNLASLLDQLRDRGVWVVGTALEERSES 187 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L+ + LA+VMGAEG G++RLTR+ CD+L+ IPMAG V SLNVSVATG+ LF+ Q Sbjct: 188 LFTFQAPESLAVVMGAEGSGLKRLTRDKCDQLLEIPMAGEVQSLNVSVATGVMLFQVRAQ 247 Query: 242 RS 243 RS Sbjct: 248 RS 249 >UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodothermaceae RepID=Q2S2J6_SALRD Length = 253 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 92/245 (37%), Positives = 134/245 (54%), Gaps = 6/245 (2%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 + G V L+R ++V + + ++ + + +G +Q L +SDG Sbjct: 9 LIGRGPVLEALKRDDLGIEKVMLKQDVSGAQIGAIRSIADDRGTPVQYVPEARLRHESDG 68 Query: 65 AVHQGIIARVKPGRQYQEND-LPDLIASLD-----QPFLLILDGVTDPHNLGACLRSADA 118 A HQG++A P R + + L D+ + D QP LL++D VTDP N GA LRSA A Sbjct: 69 ATHQGVVAITAPIRYREVDAMLSDIAPTWDAVQTAQPMLLVVDRVTDPRNFGAMLRSAVA 128 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AG VIVP A LNA A K + G A +P+ R +L R + L+E ++ G G A Sbjct: 129 AGTDGVIVPTREMAPLNAAAIKASAGTAPRIPIARTDDLPRVLTQLKERGYFVYGAEGTA 188 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + L+ + +A+V+G+EG+G+ E CDEL+SIPM G SLNVSVATG+ +FEA Sbjct: 189 ETPLWDADWDRPVAVVLGSEGQGLAPEVAEACDELLSIPMRGPAESLNVSVATGLLVFEA 248 Query: 239 VRQRS 243 R R+ Sbjct: 249 ARSRT 253 >UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0N3_9FIRM Length = 297 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 77/241 (31%), Positives = 127/241 (52%), Gaps = 3/241 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +YG + V+ L + + ++++ ++ K + S+G+ + + + E Sbjct: 57 FVYGRNIVEEALIHSAKYIEKIYFS-SKKKKNQKGIEDLAISKGLRPEYIDDDEIAEFIS 115 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIA-SLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 QG IA +D L ++P +L+LD + DP NLGA +R+A AGVH Sbjct: 116 ENDAQGCIAVFNKFAYRDIDDALRLADIRGEKPLVLVLDRIEDPRNLGAIIRTARCAGVH 175 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +I+ KDR+A + T KV+ GA S+P I VTNLA ++ L++ W+ D + Sbjct: 176 GIIIAKDRAAGITPTVAKVSEGAIFSIPCIMVTNLAAALKDLKQRGFWVYAADANGD-SC 234 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++ + G +ALV+G EG+G+ +L D +SIPM SLNVSVA GI ++E VR+ Sbjct: 235 FEQEFGGSVALVLGNEGKGISKLCLNESDYKVSIPMVNDFDSLNVSVAAGILMYEIVRKN 294 Query: 243 S 243 + Sbjct: 295 N 295 >UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=B1I0T3_DESAP Length = 251 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 87/239 (36%), Positives = 134/239 (56%), Gaps = 5/239 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +IYG + V+ L R ++ +++G + + L + +Q+ R LD +D Sbjct: 12 VIYGRNPVREAL-RGGRTLHKILVVRGADPRLFRELRELARPGRIPVQVVERPLLDRLTD 70 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G HQG+ A V +L + P +++L+ + DP NLGA LR+A+AAGV Sbjct: 71 GGAHQGVAATVSVKDFATVEELL----GTENPLIVVLNAIQDPRNLGAILRTAEAAGVDG 126 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +VP R+A L A K A GA E +P+ RVTN+A T+R +++ +W+VG + + + Sbjct: 127 AVVPSRRAAPLTPAAAKTAAGAVEYLPVARVTNIALTLREFKQKGLWVVGADPDGPVSYW 186 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + G LALV+G E G+ R R CD L+ IPM+G V SLN SVA + ++EAVRQR Sbjct: 187 DADLGGPLALVIGGEAGGLGRAVRAECDSLVRIPMSGRVGSLNASVAAALLIYEAVRQR 245 >UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H8_FLAB3 Length = 265 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 3/241 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 + I+G+ V +E ++F+ + L L + + L+ + Sbjct: 22 DFIFGLRPVIEAIEAGK-TIDKIFMQNALQGDIYYELKTLLSKHNIRPNYVPIEKLNRFT 80 Query: 63 DGAVHQGIIARVKPGRQYQEND-LPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 HQG++A + D LP L PFLLILD +TD N GA R+A+ GV Sbjct: 81 R-KNHQGVVAFISDVPFESIQDVLPQLFEEGKTPFLLILDRLTDVRNFGAICRTAECVGV 139 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 HA+I+P+ +A +N+ A K + GA ++ + + NLA + LQ+ + + + +A Sbjct: 140 HAIILPEKGAAPINSDAIKTSAGAIYNLRICKEKNLAHAVDFLQQSGLQVFSASEKAQKL 199 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +Y T A+VMG E G+ + H DE I +P+ G SLNVSVA G L+EAVRQ Sbjct: 200 IYDVDFTQPCAIVMGNEETGISKEVLHHSDEKIKLPIEGKTQSLNVSVACGAILYEAVRQ 259 Query: 242 R 242 + Sbjct: 260 K 260 >UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae RepID=A2U3D3_9FLAO Length = 248 Score = 251 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 76/246 (30%), Positives = 130/246 (52%), Gaps = 4/246 (1%) Query: 1 MSEM--IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 M+E I+G+ A+ +E ++++ KG L ++ + + L Sbjct: 1 MTETTNIFGLRAIIEAIESGS-TINKIYLQKGLRGSLYYELDKLIKDSKIATSTVPVEKL 59 Query: 59 DEKSDGAVHQGIIARVKPGRQYQ-ENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSAD 117 + S + HQG +A++ P Y E L D + + PF LILD ++D N GA +R+A+ Sbjct: 60 NRLSKNSNHQGAVAQISPIDFYDLETLLDDTLEAEKVPFFLILDQLSDVRNFGAIIRTAE 119 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 GV+ +I+ K+ SA +NA K + GAA +P+ +V ++ + +LQ NI V + Sbjct: 120 CTGVNGIIIQKNGSAPVNAETIKTSAGAAFKMPICKVDHIKDALFILQASNIKTVAATEK 179 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 D ++Y +A++MG+E G+ + D +P++G++ SLNVSVA G+ L+E Sbjct: 180 TDSSIYDVNFNQPIAIIMGSEHRGVNPSVLKMVDYKAKLPLSGNIESLNVSVACGVFLYE 239 Query: 238 AVRQRS 243 VRQRS Sbjct: 240 TVRQRS 245 >UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Dictyoglomus RepID=B5YF75_DICT6 Length = 241 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 79/240 (32%), Positives = 138/240 (57%), Gaps = 5/240 (2%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLD 59 M + IYG +AV L+ +++I KG D + +++ + +GV I+ R ++ Sbjct: 1 MEDKIYGKNAVLEALKSNI-PLNKIYIAKGIHFDNKFNEILNLAKEKGVPIKYVERSVIE 59 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 + G QG++A + + D+ + ++ +++LD + DPHNLGA R+++ A Sbjct: 60 KMVGG-NSQGVLAIISSVPYREWEDIEKTL--NNKSVIVVLDHIQDPHNLGAIARTSEFA 116 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G A+++PK RSA + + + K + GA +P++RV+N+A +R L+++ +IVG + + Sbjct: 117 GASAIVIPKARSAGVTSASFKASAGALSYIPVVRVSNIANFLRELKKKGWFIVGADLDTE 176 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + Q LALV+G+E EG+ R+ +E CD L+ IP G V SLNVSVA GI L++ Sbjct: 177 NLYNQVNYRFPLALVVGSEDEGLHRIVKESCDLLVKIPSYGKVESLNVSVALGIILYKIR 236 >UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Thermotogaceae RepID=A7HLT3_FERNB Length = 234 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 77/238 (32%), Positives = 133/238 (55%), Gaps = 9/238 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG + ++ +L + ++ DK L LI ++ + + +A + L + Sbjct: 2 IVYGRNVLKEILTSN-HPVKLIYFS-DSHDKELDKLIEQVKERKLPYTIAPKNVLKKLCG 59 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 +QG++ + + E+ LP+ PF+++LD V DP NLGA +R+A AAGV+ Sbjct: 60 EEKNQGVVIDIGDFQYADESYLPE------NPFIVLLDQVQDPQNLGAIVRTAVAAGVNM 113 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ KD SA + + K + G +P++ NLAR + L+++ +WI G L+ Sbjct: 114 VVLTKDNSAHVTPGSIKASAGTIFRIPIVITVNLARYIEKLKDKGVWIYGADMRG-KPLW 172 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + K+ L +V G EG G+R+L +E CDEL+SIPM + SLNVSV+ GI ++E +R+ Sbjct: 173 EVKLERPLGIVFGNEGSGIRQLVKESCDELVSIPMKTPIDSLNVSVSAGILIYEVLRR 230 >UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YID5_THEYD Length = 248 Score = 250 bits (639), Expect = 4e-65, Method: Composition-based stats. Identities = 84/240 (35%), Positives = 142/240 (59%), Gaps = 4/240 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 IYG++ V + + + +E++I K R K L ++ E + + +++ ++++ + Sbjct: 9 YIYGVNPVLESFKIS-DALKEIYISKNRISK-LKEILRLAEEKSISVKIVEETFIEKITQ 66 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAAGVH 122 G VHQG++A++KP + ++ + ++P F LILD V DP N G+ R ADAAGVH Sbjct: 67 G-VHQGVVAKIKPKKTITLDEALKISFKKNEPAFFLILDLVEDPQNFGSICRIADAAGVH 125 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+I K RS + + K + GA V L+ + N+ ++ L+E NI I G +A Sbjct: 126 AIIYQKKRSVGIVPSVWKASAGAVWHVNLVEINNIKYAIKTLKEHNITIYGAEAQAKDVF 185 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++S T L L++G+EG+G+R+ CD++I IPM G+++SLNVSVA+ + FE +RQR Sbjct: 186 WESDFTQPLGLIVGSEGKGIRQTVIALCDKVIKIPMRGTINSLNVSVASALITFEVLRQR 245 >UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZ75_9SPHI Length = 259 Score = 249 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 83/242 (34%), Positives = 133/242 (54%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++M++GI AV ++ E + +F+ +G L L ++ + Q + L+ Sbjct: 16 NQMVFGIRAVIEAIDSGKE-IESLFVQRGLGGSLFLELKALIKEHEIGFQQVPIEKLNRI 74 Query: 62 SDGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + HQG+IA + P + DL P++ + P +L+LDGVTD NLGA R+A+ +G Sbjct: 75 TR-KNHQGVIAVISPITYQKIEDLIPEIYEKGETPLILMLDGVTDVRNLGAIARTAECSG 133 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VHA+IVPK SA++N A K + GA +P+ R NL + + L + I +V + + + Sbjct: 134 VHAIIVPKKGSAEINPDAIKTSAGALYKIPVCRHDNLGKVGKFLIDSGIQLVVSTEKTEE 193 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++Y T ++MGAE G+ D L IPM G + SLNVSV+ G+ L+EA+R Sbjct: 194 SIYSVDYTAPTCIIMGAEDVGVSDDLIRISDHLAKIPMFGEIGSLNVSVSAGVVLYEAIR 253 Query: 241 QR 242 QR Sbjct: 254 QR 255 >UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV4_9PLAN Length = 261 Score = 249 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 2/240 (0%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 I+G +AV+ L E+ + + + + L + + ++ + L +K Sbjct: 22 WIWGRNAVRETLFAGFWPMYELHLSDHLKSEEIEQLEQQAARSTIPVFISTDKELTQKCR 81 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 + HQG+IA++ P + P LILD + DP N GA +RSA+ G Sbjct: 82 ASDHQGMIAKMAPFPYTSIELFNQ--QEITSPLFLILDRIQDPFNFGAIIRSAEIMGADG 139 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 + ++ + + + GA VPL++ T+L R ++ I IVGTA +A L Sbjct: 140 IFSGTHEQCEVTSLVCRTSAGAVNHVPLVQATDLVSLCRDWKQNGINIVGTAMQASEKLN 199 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 A+++G EG G+ + C L+ IP G SLNV+V+ I L+EA RQR+ Sbjct: 200 DYNFQQPTAVIVGNEGTGISPELQAECTHLVRIPQQGKTESLNVAVSASILLYEASRQRN 259 >UniRef50_Q8D323 YjfH protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D323_WIGBR Length = 250 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 94/241 (39%), Positives = 157/241 (65%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M+E+IYGIH ++ ++ + + LK R+D + LI + + I+ ++++L++ Sbjct: 1 MNEIIYGIHVIEEFIKNKSNKILCILFLKSRKDIKFKKLILISNEKNIKIKFVDKKFLNK 60 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 ++ HQGI+A +K + +E L ++ + F LILDG+ DP NLG+C+RSA G Sbjct: 61 ITNNKKHQGIVAYIKNSKILKEPFLLKMLENKKNYFFLILDGIMDPRNLGSCIRSAYIFG 120 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V AVI+ K+RSA++++ KKVA G+ + +PLI VTNL RT+ +L++ NI I+GT+ +A Sbjct: 121 VQAVIIRKNRSAKISSAVKKVASGSLDLIPLIYVTNLVRTINLLKKYNIQIIGTSRKAQL 180 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + K+ +A+VMG+E G+ RL +E+CD +++IP + LN+SVATGIC+FE +R Sbjct: 181 DICNKKLKQSIAVVMGSENLGISRLVKENCDNILNIPTVKNNLPLNISVATGICIFEIIR 240 Query: 241 Q 241 + Sbjct: 241 K 241 >UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Treponema denticola RepID=Q73MR5_TREDE Length = 258 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 88/257 (34%), Positives = 134/257 (52%), Gaps = 16/257 (6%) Query: 1 MSEMIYGIHAVQALLERAPERFQE-------VFILKGREDKRLLPLIHALESQGVVIQLA 53 M ++I G HA+ +L + ++ + I +E R+ ++ A + I+ Sbjct: 1 MKKIITGFHAIDEILRAEKLKIEKEKNRKPSLEIFYSKEGPRVKKILEAARKLNLKIEKK 60 Query: 54 NRQYLDEKSDGAV-----HQGIIARVKPGRQYQENDLPDLIASLDQ---PFLLILDGVTD 105 + Q+LD + H+GI+ + Q + + + A L + F++ILD VTD Sbjct: 61 DNQFLDSLTKTLPEQLRDHRGIVLVTEAENQKKGMSVDEFFAKLAEKGSAFVVILDSVTD 120 Query: 106 PHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQ 165 PHN G+ +RSAD G+ +IVP+++SA KV+ GA VP + VTNL RT+ L+ Sbjct: 121 PHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNLVRTVERLK 180 Query: 166 EENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSL 225 +E WI G L + L+MG EG GM RL E CDE++SIP G + SL Sbjct: 181 KEGFWIYGADA-GGKALPNLTFPKKTVLIMGNEGRGMSRLVEETCDEIVSIPTKGKLDSL 239 Query: 226 NVSVATGICLFEAVRQR 242 NVSVA GI L+E R++ Sbjct: 240 NVSVAAGILLYEISRKK 256 >UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clostridia RepID=Q2RFM6_MOOTA Length = 246 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 92/243 (37%), Positives = 139/243 (57%), Gaps = 3/243 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M+E + G + V+ L RA ++ + E + + +I+ +GV +Q NR L++ Sbjct: 1 MTETLAGRNQVREAL-RAGRPLNKILLAPHLEGQAIGEIINLARERGVPLQRVNRAALEK 59 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAA 119 + G HQG++A DL + + PFL++LD V DPHNLGA LRSA+A Sbjct: 60 LA-GHHHQGVVALAAAREYADLEDLLARAGEAGEPPFLIMLDRVEDPHNLGAILRSAEAV 118 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G H VI+P+ R L A + A GA E VP+ RVTNLART+ L+ + +W +G AG+A Sbjct: 119 GAHGVIIPRRRGVGLTAAVARAAVGAQEYVPVARVTNLARTLEELKGKGLWAIGAAGDAG 178 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + + T L LV+G+EG G+ L R CD + +PM G ++SLNV+ A + ++E + Sbjct: 179 QEAFNADFTVPLVLVLGSEGRGLSPLVRSRCDFTVHLPMRGRINSLNVATAATVLMYEVL 238 Query: 240 RQR 242 RQR Sbjct: 239 RQR 241 >UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Ammonifex degensii KC4 RepID=C9RBD1_AMMDK Length = 254 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 86/241 (35%), Positives = 135/241 (56%), Gaps = 5/241 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +E++YG HAV+ L ++ + +G L S+ V +Q+ + LD Sbjct: 8 AELVYGRHAVKEALLAG-RSLYKILVARGLGGAFFHELRSLAASRSVPVQIVPAEALDRL 66 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + VHQG +A V P Y L +++A+ LL+L +TDP NLGA LR+A A GV Sbjct: 67 TARGVHQGCVALVSP---YNYASLDEILAT-HPSCLLVLAYITDPRNLGAILRTAAAVGV 122 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+P R+A L A A K + G AE V + RVTNLA+T+R L+E+ W++G +A + Sbjct: 123 EGVIIPSRRAAGLTAEALKASAGGAEHVKVARVTNLAQTLRYLKEQGFWVLGAEADAKVS 182 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L++++ L +V+G E G+ ++ R CD L+ IP + LN SVA + L+E +R+ Sbjct: 183 LWEAEWNEPLVVVIGGEDTGLGKVVRRECDVLVRIPTTAKMPCLNASVAAAVILYEVLRR 242 Query: 242 R 242 + Sbjct: 243 Q 243 >UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD69_THET1 Length = 264 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 78/244 (31%), Positives = 128/244 (52%), Gaps = 7/244 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 IYG +AV+ L + + + + L + G+ I+ R LD + Sbjct: 22 YIYGRNAVRECLLAGRRKVYRLLVAYSHSASQTLEAIESLAARSGLQIERVERSILDRLT 81 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLD--QPFLLILDGVTDPHNLGACLRSADAAG 120 GA HQG++ ++ + + DL+AS + +L+LD + DP N G LR+A+ G Sbjct: 82 HGANHQGVVIEAS---EFSYSSIEDLLASGELRGKDILMLDSLQDPQNFGTLLRTAEVFG 138 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA-GEAD 179 + AVI+P+ RS ++ + GA E + + +VTNLART L+E W++G E+ Sbjct: 139 IGAVIIPEHRSVEVTPAVVNASSGATEHLNISKVTNLARTASKLKEYGYWVLGLEYDESS 198 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 ++ + + LV+G+EG G+R L R+ CD L+ IP AG + SLN +VA I L+E Sbjct: 199 SVIWDVDLRIPICLVVGSEGSGIRELVRKRCDLLVKIPQAGRIGSLNAAVAGSIALYEIY 258 Query: 240 RQRS 243 + +S Sbjct: 259 KSKS 262 >UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PR4_SPICI Length = 244 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 5/241 (2%) Query: 1 MSEMIY--GIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 M E IY GI+ V L + ++++L ++ + +S+ + + + + Sbjct: 1 MQEYIYIYGINPVVESLLNPAVKINKLYLLPQGKNNDYY--LKLAKSRQLKVVFCSAVEM 58 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 + HQ +I + + Y + PFLL+LD ++DPHN GA LR+ D Sbjct: 59 TTLVQTSKHQSLILEICKPQNYSLASITTKALQNKHPFLLVLDQISDPHNFGAILRTCDL 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 V VI+ R +NAT K + GA VP+ RV NL + L+++ WI T+ Sbjct: 119 FNVDGVIILDKRQVDINATVAKTSAGAFNYVPVCRVNNLTNAIEYLKKQGFWIYATSLNT 178 Query: 179 -DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 + + K + L++G EG G+ +H D I IP AG + SLNVSVA+ I +++ Sbjct: 179 KAQNVSELKYDIPICLIVGNEGTGISAKLLKHADFNIYIPTAGHLDSLNVSVASAILIYQ 238 Query: 238 A 238 Sbjct: 239 I 239 >UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Fusobacteriaceae RepID=D0GJ12_9FUSO Length = 244 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 69/241 (28%), Positives = 127/241 (52%), Gaps = 9/241 (3%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 + E I GI+ V +L+ +++ + KG + + +++ + + I +R+ Sbjct: 12 VMEKIIGINPVTEVLKSDK-NIEKIEVYKGIKKDTIKEILNLASKRNIKIFYTDRR---- 66 Query: 61 KSDGAVHQGIIARVKPGRQYQE-NDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 QG++A V Y E + + + + D+ ++ILD + DP N GA +RSA+ Sbjct: 67 ---TENSQGVVALVSEFDYYLELTEFFEKVLAKDKSIVVILDQIQDPRNFGAIIRSAECF 123 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 GV +++ + ++ T K + GA E V +I+VTN++ T+ ++ + G + + Sbjct: 124 GVDGIVIQDRNNVKVTETVVKSSTGAIEHVDIIKVTNISDTIDKFKKYGYKVYGAEADGE 183 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + Y+ ++ LV+G+EG GMR+ REHCD+ + I + G +SLNVSVA GI L E Sbjct: 184 NLYYEESYPKKVCLVLGSEGNGMRKKVREHCDKTLKIHLKGQTNSLNVSVAGGIILAEMS 243 Query: 240 R 240 + Sbjct: 244 K 244 >UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 Tax=Aquificales RepID=B4U792_HYDS0 Length = 251 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 129/241 (53%), Gaps = 5/241 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S +I+G + V L + +++ I + + L+ + +G+ +Q+A RQ L+E Sbjct: 8 SYVIWGRNPVIEALVAG-QSMEKILIAHDSKAPK--ELLDLAKERGIKVQIAPRQKLEEL 64 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 ++ QG++A + P E +L ++ F ++LD +TDP N+G+ R+ + G Sbjct: 65 ANTKKTQGVVAILSPITYVPEEELFRKTIE-EKGFFVVLDHITDPQNVGSIARTVEVFGG 123 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +++PKDRSA +NA K + GA + + + ++++ ++ +E W+ + Sbjct: 124 IGLLIPKDRSAPINAVVVKSSSGAIFHLKISKTPSISKAIKTFKEMGGWVYALE-KGGKD 182 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + + + +V+G+EGEG+ + EH D +SIPM G V+SLNVS A ICL+E + Sbjct: 183 ITKVDFAYPMCIVLGSEGEGVSKNVLEHSDVRVSIPMKGKVTSLNVSAAGAICLWEVYKN 242 Query: 242 R 242 + Sbjct: 243 Q 243 >UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYT1_UNCTG Length = 251 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 79/240 (32%), Positives = 135/240 (56%), Gaps = 3/240 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ G + V LL+ A ++ + + + +I+ + +G+ + + LD+ S Sbjct: 12 NVVCGRNPVLELLKAARRTVNKIMVSRTARGVVISEIINLAKQKGIALHSVPPEKLDKFS 71 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 + + QGI+A V P + + +DL + +P L+ILDG+ DPHNLGA +R+ A G Sbjct: 72 ESS--QGIVAEVSPVQYTELSDLIERSKKSLKPLLVILDGLEDPHNLGAIIRNCVAFGAD 129 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 VI+PK R+A +N T K + GA E + + RV N + + +L+E + WIVG L Sbjct: 130 GVIIPKWRAAGVNETVSKSSAGAVEHISISRVENTNQAIGLLKENSFWIVGAE-NGGRIL 188 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + LA+++G+EG G+ LT+++ D LISIP +SSLN S A+ + L+E ++R Sbjct: 189 EKIDLPFPLAVIIGSEGFGLHSLTKKNSDFLISIPQENIISSLNASCASAVILYEIAKKR 248 >UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales RepID=Q3A6R3_PELCD Length = 246 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 99/245 (40%), Positives = 153/245 (62%), Gaps = 2/245 (0%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M +IYG++ V L+ + E+ +L G E RL + A ++ V I+ +R+ LD Sbjct: 1 MGSLIYGVNPVLEALKSRQRKPLELLVLHGAESSRLSAVCEAARARRVAIRSLDRRELDA 60 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIAS-LDQPFLLILDGVTDPHNLGACLRSADAA 119 ++GA HQG+ R++ DL DL + + +L+LDG+TDPHNLGA RSA+A Sbjct: 61 LAEGARHQGVALRLESQSVIALEDLLDLWRNAGGKGVILVLDGITDPHNLGALARSAEAV 120 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE-A 178 G +++PKDRS + A A+K + GA +P+ RVTN+AR++ + ++ W+ G AG+ Sbjct: 121 GCQGIVLPKDRSCPITAAAEKASAGALAYLPVCRVTNVARSLEVFKQAGFWVYGLAGDAG 180 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 +LY + + G + LV+G EG+G+R R+HCD L++IPM G VSSLN SVA G+ LFE Sbjct: 181 SQSLYDTDLRGNVVLVVGGEGKGLRDNVRKHCDALLAIPMRGQVSSLNASVAGGVALFEV 240 Query: 239 VRQRS 243 +RQ++ Sbjct: 241 LRQQT 245 >UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacterium RepID=D0JB44_BLASB Length = 253 Score = 246 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 74/247 (29%), Positives = 118/247 (47%), Gaps = 7/247 (2%) Query: 1 MS--EMIYGIHAVQALLERAPERFQEVFILKGRED--KRLLPLIHALESQGVVIQLANRQ 56 MS E++YGI + + + ++F +G LI + + + IQ +Q Sbjct: 1 MSKLEIVYGIRPLIEAIRS-KKTISKLFFQRGFRKISNAYKELISLSKKENIPIQTVPKQ 59 Query: 57 YLDEKSDGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRS 115 + HQG+ A + P YQ DL P P L+ILD +TD N G+ +R+ Sbjct: 60 KFYQL-KNKNHQGVFAILSPIETYQIKDLLPVFYEKGKNPLLVILDRITDVRNFGSIIRT 118 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 + G A+I+PK +A + + + K + GA VP+ + N+ T+ L + IV Sbjct: 119 SACVGADAIIIPKKYTAMIGSDSIKTSSGALFKVPICQEKNIKNTIEFLMNSGLKIVSAT 178 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 +++ Y +G AL++G E +G+ E E IP +SSLNVSVA G+ L Sbjct: 179 EKSNIYWYNIDFSGPTALILGNEEKGISPKYLEISCEKAKIPAIKGISSLNVSVACGVIL 238 Query: 236 FEAVRQR 242 +E RQR Sbjct: 239 YEVFRQR 245 >UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Proteobacteria RepID=B6IRN7_RHOCS Length = 251 Score = 243 bits (622), Expect = 3e-63, Method: Composition-based stats. Identities = 91/244 (37%), Positives = 130/244 (53%), Gaps = 5/244 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVV---IQLANRQYLD 59 +IYG+H V A R + +++ + L + G+ ++ LD Sbjct: 9 NLIYGLHPVAAAWINPERRCRGLYVTE-SALAALDGAVQRAAELGLERPDPTFLEKEELD 67 Query: 60 EK-SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 + GAVHQG+ P + D+ S Q +++LD VTDPHN+GA +RSA A Sbjct: 68 KLLPPGAVHQGVALDTAPLPEVAVEDVCIAAESEPQALVIVLDQVTDPHNVGAIMRSAAA 127 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G AVIV + + K A GA ++VPL+RVTNLAR + L++ W VG Sbjct: 128 FGARAVIVQDRHAPPVTGVLAKTASGAVDAVPLVRVTNLARALDTLKQAGFWTVGLDESG 187 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 L++ +TGR ALV+G+EGEG+RRLT E CDE+ +P G V SLNVS A + L+E Sbjct: 188 ARPLHEVDLTGRTALVLGSEGEGLRRLTGERCDEIARLPTGGPVGSLNVSNAAAVALYEV 247 Query: 239 VRQR 242 R+R Sbjct: 248 ARRR 251 >UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ92_DESPS Length = 295 Score = 243 bits (621), Expect = 4e-63, Method: Composition-based stats. Identities = 82/245 (33%), Positives = 133/245 (54%), Gaps = 6/245 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK- 61 ++I+GIH + L+ P R E+ K R + ++ + V + + L Sbjct: 47 DLIWGIHPIVEALKYEPNRISEIIAQKDRRGAKFDEIVELARAAKVKVTFIDSISLQGDG 106 Query: 62 SDGAVHQGIIARVKPGRQYQENDL----PDLIASLDQPFLLILDGVTDPHNLGACLRSAD 117 + A HQG+IA+V D D + ++P +++ D + DPHNLGA +RSA Sbjct: 107 AASARHQGVIAKVTQADLMDFADFLQKFKDAVDRGEKPRIIVCDSLQDPHNLGAIVRSAL 166 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A+G V++ ++RSA L TA K + GA + + +VTNL +++ L++ W+ G + Sbjct: 167 ASGAIGVLLTRERSAPLGGTAAKSSAGAISHMDICQVTNLVKSLAELKKVGAWVFGAIKD 226 Query: 178 ADH-TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 AD +L+ + + +V+G+EG G+R L R CD +SIPM G + SLN SVA + LF Sbjct: 227 ADAVSLFDADLNVPACIVVGSEGTGIRPLVRRECDIQLSIPMVGELDSLNSSVAAAVILF 286 Query: 237 EAVRQ 241 EA+RQ Sbjct: 287 EAMRQ 291 >UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi (class) RepID=A5UYW3_ROSS1 Length = 252 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 88/245 (35%), Positives = 133/245 (54%), Gaps = 3/245 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLD 59 M +++YG +AV+ L FQ + + G +E L ++ GV ++ +R+ LD Sbjct: 1 MPDLLYGRNAVREALRARRRTFQRLLVSAGAQETGTLGDIVRIAGEVGVPVERIDRRELD 60 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADA 118 + A HQG+ ND L +P FLL+LD + DP N+G LR+A+ Sbjct: 61 RRLRDANHQGVALECSDYPYVDLNDCLALAEERGEPAFLLLLDHIQDPQNVGTLLRTAEV 120 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT-AGE 177 GVH V++P R+A++ + GA E + + VTNLA T+ +Q +W+VG E Sbjct: 121 VGVHGVVIPGRRAAEVTPAVVNTSSGAVEHLRVAVVTNLAATIEQIQHAGVWVVGVEDDE 180 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 + + + LALV+GAEG G+ RLTRE CD L+ +PM G ++SLNV+VA I L+ Sbjct: 181 RAYEYDRVDLDLPLALVLGAEGPGLARLTRERCDFLVRLPMRGQIASLNVAVAGSIVLYH 240 Query: 238 AVRQR 242 A R R Sbjct: 241 AWRVR 245 >UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMG3_CRYCD Length = 300 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 83/255 (32%), Positives = 137/255 (53%), Gaps = 15/255 (5%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLL-PLIHALESQGVVIQLANRQYLD 59 M+E I G H V L +F+ G + RLL ++H Q +V++ R LD Sbjct: 1 MAEFIEGKHPVWEALSTH-VPITRIFLADGNKHDRLLQDILHMAARQHIVMETVPRAQLD 59 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDL-------------IASLDQPFLLILDGVTDP 106 ++S HQGI+A+ +P +D+ ++ +++LD +TD Sbjct: 60 KRSKRGSHQGIMAQAQPFAYASLDDIIARGNDQAVSLAVSHSSSAAPCALIIVLDHITDA 119 Query: 107 HNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQE 166 NLGA RSA++ G +I+P RSA + A+ K + GA +P+ +V NL + + L+ Sbjct: 120 GNLGAIARSAESVGAAGIIIPNKRSAYVTASTYKSSAGAISHIPVAQVANLQQALARLKN 179 Query: 167 ENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLN 226 E W+ G + +A+ ++ + +TG + LVMG E G+ RLT+E CD +S+P G VSSLN Sbjct: 180 EGYWVAGASEKAEGGIWDANLTGNVCLVMGNENTGLARLTQEACDFFVSLPQRGVVSSLN 239 Query: 227 VSVATGICLFEAVRQ 241 V+ + +C++E +RQ Sbjct: 240 VAQSATVCMYEWLRQ 254 >UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBE6_ELUMP Length = 249 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 77/236 (32%), Positives = 129/236 (54%), Gaps = 3/236 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKR-LLPLIHALESQGVVIQLANRQYLDEK 61 ++++G+HAV +++ R ++++L + R + I A + + I + + +D Sbjct: 6 DIVFGVHAVTEVIKNRKRRVIQLYVLDNKAGHRGIEDAIKAAKRNNIKIDRMDVKTMDAL 65 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + HQGI ARV+P + + D D+ + + +D +TDP NLG+ +RSA G Sbjct: 66 TKKGNHQGIAARVEPVKIMRLIDAIDVSRGNKKDLWIAVDEMTDPQNLGSIIRSAACLGF 125 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +I+P R+ L + KVA GA E V ++ V NLA + L++E WI G + Sbjct: 126 STIILPSRRTVGLTPSVYKVASGATEKVTVVEVANLATALLDLKDEGFWIYGADM-GGQS 184 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMA-GSVSSLNVSVATGICLF 236 + ++ + LV+G+EG G+R T EHCD+++SIP A GSV SLN + A I +F Sbjct: 185 IVKTDYSFPAVLVVGSEGTGIREKTAEHCDQVVSIPQAPGSVDSLNAANAASIIMF 240 >UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacterium RepID=Q7P601_FUSNV Length = 234 Score = 241 bits (617), Expect = 1e-62, Method: Composition-based stats. Identities = 78/234 (33%), Positives = 126/234 (53%), Gaps = 8/234 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E I GI+ V L + +++ G + + + L + + I ++ Sbjct: 2 ERIIGINPVTEALLNKEKNIEKLEFYNGLKGETVQKLKDLASKRNIKIFYTGKKI----- 56 Query: 63 DGAVHQGIIARVKPGRQYQENDLP-DLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 QG+ + Y++ D + +A D+ +LILD + DP N GA +RSA+ V Sbjct: 57 --DNSQGVAVYISNYDYYKDFDEAYEELAEKDKSLVLILDEIQDPRNFGAIIRSAEVFKV 114 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +I+P+ S ++N T K + GA E V + +VTNL+ T+ L++ + W+ G AGEA Sbjct: 115 DLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNLSDTINKLKKLDYWVYGAAGEASIN 174 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + + ++ LV+G EG G+R+ REHCD+LI IPM G ++SLNVSVA+GI L Sbjct: 175 YNEENYSNKIILVLGNEGSGIRKKVREHCDKLIKIPMYGQINSLNVSVASGILL 228 >UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A0M5B1_GRAFK Length = 245 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 2/239 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I+GI V ++ + ++VFI K L L+ I + L++ S Sbjct: 7 IFGIRTVIEAIDS-KKDIEKVFIQKDLSGPLFKELNRNLKEGNYNISYVPVEKLNKLSKN 65 Query: 65 AVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQG++A + P L D S P ++LDG+TD N GA +R+A+ GV Sbjct: 66 GNHQGVVANISPIGFVSLEKLVEDSQKSSTTPLFVLLDGITDVRNFGAIIRTAECCGVTG 125 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I+ + SA +NA K + GA ++P+ +V ++ + LQ +I ++ + D ++ Sbjct: 126 IIIQEKGSAPINADTVKTSAGAVFNIPICKVNHIKDAVFHLQTYDIKLIAATEKTDDVIF 185 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + +A++MG E +G+ + D +PM GS++SLNVSVA G L+EAVRQR Sbjct: 186 DIDLKQPIAIIMGDEAKGISNSILKSVDYKAKLPMLGSIASLNVSVACGAFLYEAVRQR 244 >UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Flexibacteraceae RepID=D2QM84_9SPHI Length = 276 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 136/244 (55%), Gaps = 8/244 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 EM++GI +V L+ ++ ++++ KG + + + + V IQ + LD + Sbjct: 31 EMVFGIQSVIETLKSD-QQIDKLYMEKGLSNP---DIQNLAFQKRVTIQRVPVERLDRFT 86 Query: 63 DGAVHQGIIARVKPGRQYQEND-LPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 HQG++ + + + ++ + D+ + PF L+LD +TD N GA R+A+ G+ Sbjct: 87 R-KNHQGVVCLIAQVQYVKLSNVIADVFERGEVPFFLLLDRITDVRNFGAIARTAECTGI 145 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +++P +A +N+ A K + GA + + R +L T++ LQE I +V ++ Sbjct: 146 QCIVIPGRGAAAINSDAMKTSSGALNHISVCREPDLTETVKYLQESGITVVACTEKSARD 205 Query: 182 LYQ--SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 LY+ + +TG +A++MG+E +G+ D + IP+ G+V SLNVSVATG+ L+EAV Sbjct: 206 LYERTTDLTGPMAIIMGSEEDGISPELLRMVDTHVKIPLLGAVGSLNVSVATGVILYEAV 265 Query: 240 RQRS 243 RQRS Sbjct: 266 RQRS 269 >UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVE3_DICNV Length = 242 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 95/239 (39%), Positives = 147/239 (61%), Gaps = 4/239 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 I GIHA++ L + + +G+ K L L+ ++ + I R Y+D + Sbjct: 5 WIGGIHALRQALNDG--NLLRLEVSEGKTSKNLASLVADAKAAQIEIITVPRHYIDHRLP 62 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGI + Q ++ I+ +++PF+L+LD + DPHNLGACLR+A AAGV A Sbjct: 63 DVRHQGIAGECRLSAQA--SNWQQAISGVERPFILVLDSIQDPHNLGACLRTAMAAGVDA 120 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++P +A + +K+ACGAAE++ + RV NL R + M++E+ +W+VG AGEA+ +L+ Sbjct: 121 VVLPNSCAADITPVVRKIACGAAEALAIFRVANLKREVEMMKEKGLWVVGGAGEAEKSLF 180 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++G L +++G E +G+ R+ CD L +IPMA ++ SLNVSVA GI LFEA RQR Sbjct: 181 DLDLSGGLVMIVGNEEKGIHYGLRQTCDWLAAIPMAETMESLNVSVACGIMLFEARRQR 239 >UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Clostridium RepID=B8I1W5_CLOCE Length = 269 Score = 239 bits (611), Expect = 6e-62, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 8/241 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLL-PLIHALESQGVVIQLANRQYLDEKS 62 + GI V ++ + ++ I + E LI ++ I L + E S Sbjct: 31 FVEGIRFVSDAIDNG-QSIAKIIISEKLEGLNGGSELIEKVKGACSDISLVPEKIFREVS 89 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 D QGI+A +K + + + + ++ILD + DP N G +R+ADAAG+ Sbjct: 90 DTQTPQGILAVIKKNKYSFDKVI------TEGSSVVILDCLQDPGNAGTIIRTADAAGIS 143 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AV++ K + + G+ +P+ N+ +R+L++ + ++ + + Sbjct: 144 AVLMSKGCVDLYSPKVLRSTMGSVFHIPIFEGLNITEIIRVLKQNDYKVIASHLSGKNNY 203 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 +Q +TGR A+++G E G+ T D L+ IPM G SLN SVA + ++E VRQ+ Sbjct: 204 FQEDLTGRSAIIVGNEANGISDETAYMADSLVKIPMPGKAESLNASVAASVMIYEIVRQK 263 Query: 243 S 243 S Sbjct: 264 S 264 >UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPG2_9FIRM Length = 270 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 5/239 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ GI V+ + K R+ + L ++G I + +D Sbjct: 32 VVEGIRLVEEAAGSTWRPAMCFYTEKAAAAPRVQATLEILAAKGCRIFPVADNVYAKITD 91 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI+ ++ R D + S D+ +++LD V DP N+G +R+ADAAG Sbjct: 92 TEQPQGILCVMEKKRYT-----FDDLQSSDRELIVVLDNVQDPGNVGTVVRTADAAGCCG 146 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VI+ K + + + G+ +P+I L+ + I ++ TA ++ + Sbjct: 147 VILTKGCADLFSGKTVRATMGSLFHLPVITGVAEQEVAAFLERQGIRLLATALDSSSLYH 206 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + +A+V G EG G+ ++ E DE + IP+ G SLNV+VA + L+EA RQR Sbjct: 207 DVDLRSPVAIVFGNEGAGVSKVILEKADERLYIPLYGRAESLNVAVAAAVILYEARRQR 265 >UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Ruminococcaceae RepID=C7H9L6_9FIRM Length = 267 Score = 239 bits (611), Expect = 7e-62, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 6/244 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG + V LL+ V I +G + G ++ + L + Sbjct: 24 LVYGKNPVTELLKSGS-GVDTVLIAEGMAPAVAAYYTAMAKEAGATVKRVHPNKLRLMTG 82 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG+ A DL ++ + PFL++ DG+ DPHNLGA +RSA G H Sbjct: 83 TESHQGVAAFASEIEYVTVEDLLNVAREKGEPPFLVLSDGIEDPHNLGAVMRSALLCGAH 142 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +++PK A + T K + GAAE +P+ RV N+ T+R L+++ +++ + L Sbjct: 143 GIVIPKRGGASVTPTVIKSSAGAAERLPVARVANIGETIRRLKDQGVFVYCADMDG-VPL 201 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAG---SVSSLNVSVATGICLFEAV 239 ++ +TG +ALV+G+EG G+ +L ++ CD ++ + MA V S NVSVA GI L+E Sbjct: 202 RKNNLTGPIALVLGSEGSGVSQLVKKLCDGVVRLDMAAQGTGVDSFNVSVAAGIILYEIQ 261 Query: 240 RQRS 243 QR+ Sbjct: 262 SQRA 265 >UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6N6_9BACT Length = 278 Score = 239 bits (610), Expect = 9e-62, Method: Composition-based stats. Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 3/238 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 + +G + LER+ E + V++ +G E + ++ ++ +R LD+ + Sbjct: 37 LCWGRNPSLEQLERSGESVERVWLARGVEAEFEAQVVRLAGR--TALERVDRLALDQMTG 94 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 GAVHQGI ++ + +DL D +A +++LD DPHNLG+ +R+A+AAG A Sbjct: 95 GAVHQGIALSLRRPDEVSLDDLLDQLAGGP-ALVILLDRCQDPHNLGSVIRTAEAAGASA 153 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V+VPKDRS +L T K + GAA P+I V N+ R + L+E W+VG AGE+ L Sbjct: 154 VLVPKDRSVRLTGTVVKASAGAALRFPVISVVNVKRALDDLKEAGFWVVGLAGESSEPLG 213 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + R L +GAEG G+ LTR+ CD L IPM+G SLN VA + +E R+ Sbjct: 214 KLAWDQRTVLAVGAEGTGLAELTRKSCDFLARIPMSGQAESLNAGVAAALGAYEWARR 271 >UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Tax=Actinobacteria (class) RepID=A9WLY5_RENSM Length = 336 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 85/250 (34%), Positives = 136/250 (54%), Gaps = 10/250 (4%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDEK 61 EM+ G ++V L + ++I E D R+ ++ +G+ + ++ LD Sbjct: 77 EMVTGRNSVVEALRAGI-PAKALYIAVRIEVDDRVKEVLKLASERGIPLMETHKPELDRM 135 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASL-------DQPFLLILDGVTDPHNLGACLR 114 +D AVHQG+ ++ P D+ + P ++ LDG+TDP NLGA +R Sbjct: 136 TDDAVHQGLALQIPPYDYPDAIDIAQETVDKFKKGYIKNSPLIVALDGITDPRNLGAIIR 195 Query: 115 SADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT 174 S A AVIVP+ RS L A+A K + GAA VP+ R NL R + + +++G Sbjct: 196 SVSAFAGQAVIVPERRSVGLTASAWKTSAGAAVRVPVARAGNLNRALESFKGMGYFVLGL 255 Query: 175 AGEADHTLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGI 233 G+ D +L + + +V+G+EG+G+ RL RE+CD+++SIP+ ++ SLN S+A GI Sbjct: 256 DGDGDVSLPALAVAKEPVCIVVGSEGKGLSRLVRENCDQIVSIPIDSAMESLNASMAVGI 315 Query: 234 CLFEAVRQRS 243 L+E RQRS Sbjct: 316 TLYEIARQRS 325 >UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J4Z3_DESRM Length = 267 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 4/238 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 + GI V+ L + ++ + + +R L+ +GV + + + E SD Sbjct: 30 VEGIRFVEEALSSTWQTEILLYTDQACQAQRGKILLDLARDKGVEVLAVSDAIMKELSDT 89 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAV 124 QG++A ++ L D+I +P ++I+DGV DP NLG +RSADAAG V Sbjct: 90 ETPQGMLAVLRQPDYT----LEDIIRPDQKPLVVIVDGVQDPGNLGTIIRSADAAGASGV 145 Query: 125 IVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQ 184 I+ K N + G+ +P+I+V+++ + L + ++ +++ Sbjct: 146 ILLKGTVDIYNPKTLRATMGSLFHLPVIQVSDVNEALEYLASIGVTLLVGEPAGGIPVFK 205 Query: 185 SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + + +++ EG G R + + I+IPM G SLNV++AT I L+EA+RQR Sbjct: 206 ANLQTPVGIIVANEGAGPREEIFRYNHQKITIPMPGCAESLNVAIATSIILYEAIRQR 263 >UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Tax=Bacteroidetes RepID=Q11YB9_CYTH3 Length = 268 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 125/242 (51%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +MI+GI V LE E ++ I + E + L V + + LD Sbjct: 23 KDMIFGIRPVIEALEAGKE-IDKILIQRNIEQAVVQELFELANRVKVPVIKVPVEKLDRV 81 Query: 62 SDGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + HQG+I + +++ S P L++LD VTD N GA RSA+ G Sbjct: 82 TR-KNHQGVICYLSAINFASLDNIVSACFESGKNPLLVMLDRVTDVRNFGAVARSAECLG 140 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V A+IVP +AQLN+ A K + GA +P+ RV +L T++ L++ + I+ + +A Sbjct: 141 VDAMIVPSRGAAQLNSDAVKTSAGALYHIPVCRVDHLIDTVKYLKQCGLRIIACSEKASI 200 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +Y +T ++MG+E +G+ + D ++IPM+G ++SLNVSVATG+ L E R Sbjct: 201 NVYDEDLTDPCVILMGSEEDGISMDLLRYADAHVTIPMSGHINSLNVSVATGMILSEVTR 260 Query: 241 QR 242 QR Sbjct: 261 QR 262 >UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Anaplasma RepID=Q2GL62_ANAPZ Length = 258 Score = 236 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 125/243 (51%), Gaps = 8/243 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 IYG HA + L+ E+ I DK P+I +++ + I+ +D Sbjct: 11 WIYGKHACLSALKNPNRVCIELLITHKFIDKN-DPVIKLAKNRKIGIRDVEIAKIDSLVG 69 Query: 64 G-AVHQGIIARVKPG------RQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSA 116 A+HQG++ +V P + D+ + +L+LD VTD HN+GA LR+A Sbjct: 70 SKAIHQGMLLKVLPLFGRNASSLIRIEDIVAQTEAAPTSTILVLDEVTDVHNVGAVLRTA 129 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 V AV++ + S + K + GA + VP++ + NL +T+ L+++N W G Sbjct: 130 ACFNVDAVVLTEHNSPSESCGMAKASSGAIDIVPVVCIGNLVKTLEYLKQKNYWCYGFDA 189 Query: 177 EADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 L+Q + + R +++GAEG+GMR LT++HCD L+ IPM+ + SLNVS A I ++ Sbjct: 190 SGGTCLHQVEFSERRVVILGAEGKGMRHLTKKHCDHLVKIPMSEKMESLNVSNAAAIAMY 249 Query: 237 EAV 239 Sbjct: 250 SVF 252 >UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Coriobacteriaceae RepID=C8W818_ATOPD Length = 338 Score = 235 bits (601), Expect = 9e-61, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 128/241 (53%), Gaps = 2/241 (0%) Query: 2 SEMIYGIHAVQALLERA-PERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 +++I G AV L P + V G++D+ + L LE +G+ ++ R LD Sbjct: 95 TDLIEGRRAVAEALTVGIPLKNALVQAASGQKDQEIEALARQLEQEGIPVERVARPVLDS 154 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 S HQG+I R +P +++ A +++LD VTD N GA +RSA+ G Sbjct: 155 LSSHGAHQGVIVRTQPFAYADLSEIIQR-AGSANALVVVLDHVTDEGNFGAIVRSAEVVG 213 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V++ R+A++ A K + GA +P+ +V+NL R + L+ W G+ A Sbjct: 214 AAGVVIANARAARVGVGAYKTSAGAVLHLPIAQVSNLPRALEELKAAGFWTCGSTEHATQ 273 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +++++ M GRLALVMG+EG G+ RL E CD +P G V SLNV+ AT + +E +R Sbjct: 274 SVWEAPMGGRLALVMGSEGSGISRLMLEKCDFTCKLPQFGQVESLNVAQATTVMCYEWLR 333 Query: 241 Q 241 + Sbjct: 334 R 334 >UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETE6_AMOA5 Length = 246 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 125/240 (52%), Gaps = 3/240 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I+G AV + ++FI K ++ + +A+ + + L++ Sbjct: 7 IFGSKAVLEAILAGK-TIDKIFIDKDTKNADYQSIFNAIRYKQIPCSRVPVAKLNKLVP- 64 Query: 65 AVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGI+A + P + + D + P ++ILDGVTD NLGA +R+A G HA Sbjct: 65 LNHQGIVALLSPVPLVTLSHIVQDTYEKGELPLIIILDGVTDVGNLGAIVRTAVCVGAHA 124 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +++PK SA L + A K + GA +P+ R NL ++ LQ + ++ + ++Y Sbjct: 125 LVLPKQGSASLGSGAMKTSAGALAHLPICREANLQASINYLQNSGLQVIACHEKTQTSIY 184 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 Q K+T A+++G+E +G++ D SIPM G +SSLNVSVA I L+E+ RQR+ Sbjct: 185 QVKLTVPTAILLGSEDKGIQPQLLNKVDVQASIPMVGPISSLNVSVAAAIILYESFRQRN 244 >UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale str. Israel RepID=D1AU26_ANACI Length = 262 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 131/244 (53%), Gaps = 7/244 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK-- 61 I G H + L+ +E+ + G K+ + +++G+ + + + + Sbjct: 12 WICGRHVCISALQNPNRVCRELLVT-GEFLKKHPEVARMAQNKGIRPRRVAAEEIGKIWG 70 Query: 62 SDGAVHQGIIARVKPGRQYQENDL--PDLIA--SLDQPFLLILDGVTDPHNLGACLRSAD 117 VHQGI RV + L D+++ + +++LD VTD +N+GA +RSA Sbjct: 71 HGRTVHQGIALRVGKLFGRDGDKLRVEDIVSGSAFTASTVVLLDQVTDINNVGAIVRSAA 130 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 V AVI+P+ S N +V+ GAA+ VP++RV NL +TM L++ W G + Sbjct: 131 CFDVDAVILPEHHSPSENCIITRVSSGAADLVPVVRVGNLVKTMEYLKQNGYWCYGMDVD 190 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 D L++ R A+++G+EG+G+RRLTREHCD L+ IPM+ ++SLNVS A I L+ Sbjct: 191 GDKALHEISFCERRAIILGSEGKGIRRLTREHCDHLVKIPMSARINSLNVSNAAAIVLYS 250 Query: 238 AVRQ 241 + Q Sbjct: 251 SYLQ 254 >UniRef50_D1I377 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=3 Tax=Magnoliophyta RepID=D1I377_VITVI Length = 569 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 20/257 (7%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGRE----------DKRLLPLIHALESQGVVI 50 + E IYG+ V A L F +++ +G + K ++ E G+ I Sbjct: 296 VGEGIYGVGPVLAALSAGRREFYALYVQEGLDLSGNNRKKKDKKGFEKVLKLAEKIGLSI 355 Query: 51 QLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNL 109 + ++ L+ D HQG++ P + +L ++ ++ P + LD VTDP NL Sbjct: 356 KDLSKHDLNMVVDNRPHQGLVLDASPLEMVKIKELDPVLTEGEKGPLWVALDEVTDPQNL 415 Query: 110 GACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI 169 GA +RSA GV V++ SA L+ K + G+ E + L N+ + + E Sbjct: 416 GAIIRSAYFFGVSGVVLCAKNSAPLSGVVSKASAGSLELMELRFCKNMMQFLTSSAENGW 475 Query: 170 WIVGTAGEA-DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGS------V 222 ++G + L + LV+G+EG G+R L C +LI IP G+ V Sbjct: 476 QVLGGSVSPRAIPLNEISPGAPTILVLGSEGTGLRPLVERSCTQLIRIP--GNIPSFLAV 533 Query: 223 SSLNVSVATGICLFEAV 239 SLNVSVA G+ L V Sbjct: 534 ESLNVSVAAGVLLHHLV 550 >UniRef50_D1B9Y1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9Y1_THEAS Length = 256 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 139/241 (57%), Gaps = 5/241 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +++YG + V +LLE + +V I + R D ++ ++G+ Q + + LD Sbjct: 11 DLVYGRNPVMSLLEGGGDCL-KVLISRRRSDPVRERIVEICRARGIPFQEVDGKVLDRMV 69 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPF---LLILDGVTDPHNLGACLRSADAA 119 + HQG++ARV P + DL L + D LL++D V DPHNLGA +R+A+AA Sbjct: 70 GTSSHQGVVARVSPVGILKLEDLYRLAGASDPVAAFALLVVDHVEDPHNLGAMIRTAEAA 129 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE-NIWIVGTAGEA 178 G AV+ P R A K + GAA VPLI V N+++ +R ++E+ +W VG + Sbjct: 130 GFSAVLFPSRREALPTGVVVKASAGAALRVPLIMVGNVSQAIRRVKEDLGLWAVGLEAQG 189 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 +++ ++ R+ALV+G+EG+G+ R+ CD+++ IPM G+ SLNVSVA GI +++ Sbjct: 190 RASVFDERLPPRIALVVGSEGKGLSRVASAACDDILMIPMMGASGSLNVSVAAGIVMYQW 249 Query: 239 V 239 Sbjct: 250 Y 250 >UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Bifidobacterium longum RepID=B7GPD2_BIFLI Length = 333 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 88/257 (34%), Positives = 133/257 (51%), Gaps = 16/257 (6%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S+++YG ++V L + + D R ++ G+ + A+R +D Sbjct: 71 SDLVYGRNSVLEALRVGVPSSTLYIMSRIEHDDRTREIVKIAGMNGLHMLEADRLEMDRI 130 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASL---------------DQPFLLILDGVTDP 106 + HQG+I +V P + N+L D +P + LDGVTDP Sbjct: 131 ARSGNHQGVILKVDPFQYSSLNELADRAEKKAKAMEAANSAAARIAARPLFIALDGVTDP 190 Query: 107 HNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQE 166 NLGA +RSA A G + VI+P+ RSA +NA A KV+ GAA +P+ RV NL + + L+E Sbjct: 191 QNLGAVIRSAAAFGANGVILPERRSASVNAAAWKVSAGAAAHMPVARVVNLTKALEGLKE 250 Query: 167 ENIWIVGTAGEADHTLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSL 225 ++VG G D + ++ + L +V+G+EG G+ RL RE CD + IP++ SV SL Sbjct: 251 RGYYVVGLDGGGDKLVGETGFESDPLVVVLGSEGSGLGRLVRETCDAIAGIPISSSVESL 310 Query: 226 NVSVATGICLFEAVRQR 242 N SVA GI L+ R Sbjct: 311 NASVAAGISLYAVSNAR 327 >UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BGA8_9BACT Length = 244 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 82/239 (34%), Positives = 120/239 (50%), Gaps = 3/239 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I+GI A+ +E V++LKG + K L+H L ++ + + LD Sbjct: 7 IFGIRAILEAIESGK-SLDRVWLLKGTQSKLFEQLLHVLRNKNIAFSFVPVERLDR-FSS 64 Query: 65 AVHQGIIARVKPGRQYQENDLPD-LIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQG +AR+ L + ++ + P ++LDGVTD N GA LRSA A GV A Sbjct: 65 KNHQGAVARIGALSTQDMEPLIESVLKEKENPVFVLLDGVTDTRNFGAILRSAAATGVDA 124 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V + SA LN K + G A VP+ +V +L + L+ +I +G ++ TLY Sbjct: 125 VFISSTGSAPLNGDVVKTSAGGAFKVPISKVQHLKDVVYYLKAHDIPTLGITEKSTETLY 184 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 S + G LALV GAE G+ + D +PM +V SLNVSVA + +E +RQR Sbjct: 185 DSDLKGPLALVFGAEDVGISNGLLKILDHKAKLPMTEAVDSLNVSVACAVVFYETIRQR 243 >UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2REE3_ARCPR Length = 232 Score = 233 bits (595), Expect = 4e-60, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 124/237 (52%), Gaps = 11/237 (4%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 + GI+ V L+ + ++F+LK + R+ ++ + + + + + Sbjct: 3 VMGINGVMEALKSG--KVNKIFVLKDATNPRIKEIVALAKKKKIPVVYTP-----QLPKE 55 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAV 124 A +G++A + P + + + D + F+L LD V DP N+GA +RSA+ G V Sbjct: 56 A--RGVMAEISPIEYKEVDTIIDKCI-REGSFILFLDSVEDPQNMGAIMRSAEFFGCAGV 112 Query: 125 IVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQ 184 ++PK R Q+N T KV+ GA + + RV NLA ++ L++ I +VG + + L Sbjct: 113 VIPKRRCVQVNETVAKVSAGAVFHLDIARVENLANILKKLKKFGITVVGADLDGE-PLRN 171 Query: 185 SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 ++ LA+V+G E +G+ + ++ CD + I G ++SLN+SVA I ++E R+ Sbjct: 172 VDLSPPLAIVVGGEDKGLSKPVKKQCDFIAKIEGYGKINSLNLSVAGAIIMYEFRRR 228 >UniRef50_Q5GSE7 RRNA methylases n=12 Tax=Rickettsiales RepID=Q5GSE7_WOLTR Length = 258 Score = 232 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 78/239 (32%), Positives = 126/239 (52%), Gaps = 5/239 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE-KS 62 +YG H L+ E+ + + + + ++S+G+ +QL + L E S Sbjct: 11 WLYGKHTCMLALKNKNRLCIELLVTENSYREYEKEIRQCVDSKGIKVQLVKNKILSEVLS 70 Query: 63 DGAVHQGIIARVKP-GRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 A HQGI +V P ++ + +S D ++ILD VTD HN+G+ LR++ V Sbjct: 71 KSANHQGIALKVAPILHSLSIKEIAE--SSSDSSTIVILDQVTDTHNIGSILRTSACFNV 128 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 A+++P + S NA+ K A G + VPLI VTN+ +TM L++ W G A Sbjct: 129 DALVLPYNHSPSENASIAKAASGTLDIVPLIHVTNVVKTMEYLKKVGYWCYGFDSNAKEN 188 Query: 182 LYQSK-MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + + K ++ ++ G+EG+GMRRL +E+CD L+ IPM+ + SLNVS A I L+ Sbjct: 189 IDEIKSFGKKIVIIFGSEGKGMRRLVKENCDYLLKIPMSNVIDSLNVSNAAAIGLYSVY 247 >UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacteria RepID=Q7MTU3_PORGI Length = 249 Score = 232 bits (594), Expect = 7e-60, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 128/240 (53%), Gaps = 3/240 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 MI+G+H++ E E ++FI +G + ++ +I + V + + LD + Sbjct: 6 MIFGLHSISEAFEAGKE-IDKIFIRRGLKTEQTEAIIREAVERCVPVMHVPIEKLDRLTS 64 Query: 64 GAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG++A + + + L P L PFLL+LDG+TD N GA R+A+ AGV Sbjct: 65 -KNHQGVVAILSAIEYTRLDQLMPMLYEEGKAPFLLLLDGITDVRNFGAIARTAECAGVD 123 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+I+P+ S + A K + GA +P+ RVT++ +R LQE I IV + +A Sbjct: 124 AIIIPERGSVSVGGDAIKTSAGALHRIPVCRVTSIPGAIRSLQEYGIRIVAASEKAADLY 183 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 M L +VMGAE G T D +++IP G++ SLNVSVA GI ++E VRQ+ Sbjct: 184 TDVPMKLPLGIVMGAEDVGPSPDTLRMADGIVAIPQMGAIGSLNVSVAAGIVIYEVVRQQ 243 >UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacterium RepID=B8DUY4_BIFA0 Length = 331 Score = 231 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 85/257 (33%), Positives = 134/257 (52%), Gaps = 18/257 (7%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDEK 61 +++ G ++V L +++ E D R ++ G+ + A+R +D Sbjct: 68 DLVIGRNSVLEALRVG-VPASVLYVANRIEHDDRTREIVRLAGQHGLNLLEADRLEMDRI 126 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ---------------PFLLILDGVTDP 106 + HQG+I + P + ++L + + P + LDG+TDP Sbjct: 127 ARSGNHQGVILKADPFQYSSLHELVERAERKARAMEMADSKASRLSARPLFIALDGITDP 186 Query: 107 HNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQE 166 NLGA +RSA A GV+ VI+P+ RSA +NA A KV+ GAA +P+ RV NL + + L+E Sbjct: 187 QNLGAVIRSAAAFGVNGVILPERRSASVNAAAWKVSAGAAAHMPIARVVNLTKAIEALKE 246 Query: 167 ENIWIVGTAGEADHTLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSL 225 + +G G + ++ T L +V+G+EG+G+ RLTRE CD + SIP+ +V SL Sbjct: 247 RGYYSIGLDGGGSKLVGETGFETDPLVVVLGSEGKGLSRLTREACDAIASIPITSAVESL 306 Query: 226 NVSVATGICLFEAVRQR 242 N SVA GI L+ V R Sbjct: 307 NASVAAGIALYATVNAR 323 >UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces RepID=C0W229_9ACTO Length = 322 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 92/244 (37%), Positives = 137/244 (56%), Gaps = 3/244 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +E+I G +AV ++ + VF+ D+R+ ++ + G + + L+ Sbjct: 78 NELIVGRNAVFEAVDAGID-IIRVFLAGNALDERIGKVVRTATALGAPVLEVTKMDLENA 136 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAAG 120 S + HQ I V DL + Q P ++ LD VTDPHNLGA LRS A G Sbjct: 137 SGESAHQSIGIEVPEYDYCSAQDLLERTKENAQIPLIVALDQVTDPHNLGAVLRSGGAFG 196 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 + V++ + RSA +NA A KV+ GAA VP+ R TNL R + L+E ++VG G D Sbjct: 197 ITGVLISERRSASVNAAAWKVSAGAAARVPVARETNLVRALGELKEAGCFVVGLDGGGDV 256 Query: 181 TLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 +L + TG L +V GAEG+G+ RL RE CD+++SIP++ +V SLN +VATGI L+E Sbjct: 257 SLRDLDLATGPLVVVTGAEGKGLSRLVRETCDQIVSIPISSAVESLNAAVATGIALYEVA 316 Query: 240 RQRS 243 +R+ Sbjct: 317 SKRA 320 >UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomycetaceae RepID=C0W457_9ACTO Length = 330 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 99/243 (40%), Positives = 131/243 (53%), Gaps = 4/243 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E++ G +AV RA VF+ D RL ++ G + + L+ Sbjct: 83 EIVCGRNAVAEA-ARAGVPISRVFMAVSAESDDRLGAVVRRATLIGCPVLETTKLDLEAL 141 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 +DGAVHQG+ V DL D A P L+ LD VTDPHNLGA LRS A G Sbjct: 142 TDGAVHQGVAIEVPAYGYTSALDLLDRARAVGHTPLLVALDQVTDPHNLGAVLRSTGAFG 201 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VI+P+ RS +NAT KV+ GAA VP+ R TNL RT+ L++E ++VG G + Sbjct: 202 GDGVIIPERRSVGVNATVWKVSAGAAARVPVARETNLVRTLETLKKEGCFVVGLDGGGET 261 Query: 181 TLYQSKMTG-RLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + + L LV GAEG G+ RL RE CD + SIP++ +V SLN +VATGI L+E Sbjct: 262 LMEDLSLADSPLVLVTGAEGAGLSRLVRETCDVIASIPISQTVESLNAAVATGISLYEVD 321 Query: 240 RQR 242 R R Sbjct: 322 RLR 324 >UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi RepID=B9KYY7_THERP Length = 261 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 6/242 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDE 60 SE +YG +AV L R + +F+ G E R++ L+ A +G+ + + R LD Sbjct: 10 SEYLYGRNAVAEALRGR-RRHRRLFVASGIETHGRIVALMEAARVRGIPVIVIPRSELDR 68 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 HQG++ P Y D L+ + +L+LD + DP N+ LR+A+AAG Sbjct: 69 MVGSVNHQGVVLETSP---YPYVDFATLLDPAPESIVLLLDHLQDPQNIATLLRTAEAAG 125 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA-GEAD 179 V V++P+ R+A + + GA E + + VTNLAR + L+E WIV G Sbjct: 126 VRGVVLPERRAAGITPAVVNASAGAVEHLQITLVTNLARAVDTLREHGYWIVALEPGPNA 185 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 +L+++ + L L++GAEG G+ + + D + IPM G + SLN +VA I L+E V Sbjct: 186 QSLFRAPLPLPLVLLVGAEGHGLSPVLLKRADVQVIIPMLGQIESLNAAVAGSIALYEIV 245 Query: 240 RQ 241 R+ Sbjct: 246 RR 247 >UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM16_MYCA5 Length = 229 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 124/241 (51%), Gaps = 15/241 (6%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M +IYG ++V L+ ++++ KG +K + I+ + Q +++ Sbjct: 1 MKNLIYGKNSVLDALKAN-FPIAKIYLQKGLVNKAIT---------FKNIEYLSIQEMNQ 50 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 HQG IA + YQ DL + +L+LD + DPHN GA +R+A+ G Sbjct: 51 LVKNGNHQGYIAEI---YNYQYYDLGTIFKDKPN-LVLMLDHIQDPHNFGAIIRNANGFG 106 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 + +I+PK+R+ ++ T K++ GA + +IRV +L T++ LQ+ WI + + Sbjct: 107 IKHIIIPKNRACEVTPTVLKISSGAFTEIKIIRVGSLFDTLKELQKNGFWIYSSTLDDKA 166 Query: 181 T-LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 T L+++K L++G E G+ +H D L+ I G+V SLNV+ AT + L+EA Sbjct: 167 TKLHKTKFATPTCLIVGNEESGVSHTLIKHSDALVYIEQKGTVQSLNVASATAVLLYEAT 226 Query: 240 R 240 + Sbjct: 227 K 227 >UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPE7_SYNFM Length = 252 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 125/239 (52%), Gaps = 3/239 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 + G + V+ +L E+ + R D+R+ L+ +G+ + R L Sbjct: 13 WVSGFNPVREVLLTGRVEVLEMIVA--RSDQRVRELVELGALRGIAPRQETRDGLSALVG 70 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 A HQG+ R++ L + +P L+ILD + DP NLGA LRSA G Sbjct: 71 HAHHQGVALRMREFPYAALEALLEKPTGEREP-LVILDCLQDPQNLGAMLRSACFLGARG 129 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VIVP+DRSA++ +T ++A GA +P+I+V NL R + L+E +WI G +A T+Y Sbjct: 130 VIVPRDRSARVTSTVIRIAAGATAYLPVIQVNNLVRALEQLKECGLWIFGLDAQAAQTIY 189 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + +T L LV+G E +G+R L CD ++ IP G + SLN + + I L E R+R Sbjct: 190 DADLTVPLGLVVGNEQKGLRPLVARACDAMVRIPEHGPLQSLNAATSGAIALAEVQRRR 248 >UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31319 Length = 256 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 75/240 (31%), Positives = 121/240 (50%), Gaps = 6/240 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG +AV L + E E+ L + H + V + +A+ +++ +S Sbjct: 21 ILYGRNAVHEALRGSREVQHIWATAHAVEEPWLAAVAHDASAVDVNV-VADGGWIERRSG 79 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQG+ A+V P R ++L + + P ++ LD + DP NLGA R+A+ AG Sbjct: 80 SPDHQGVCAQVAPFRYAYVDELLAV----EHPLIVALDEIQDPQNLGAIARTAECAGATG 135 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +++P RSA + K + GA E +P+ R NLA + + W+ G G+ Sbjct: 136 LVIPARRSADVTPAVCKASAGAVEHLPIARARNLADFLGDARGVGAWVYGAEGDGGVPYT 195 Query: 184 QSKMTGR-LALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 +G + LV+G+EG G+R CD LI++P+ G + SLNVS A L+E VRQR Sbjct: 196 GVDYSGPGVVLVLGSEGRGLRPRVAASCDALIALPLRGRIGSLNVSAAASALLYEIVRQR 255 >UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Caulobacteraceae RepID=C5SHP3_9CAUL Length = 322 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 90/248 (36%), Positives = 126/248 (50%), Gaps = 16/248 (6%) Query: 4 MIYGIHAVQALLERAPER-FQEVFILKGREDKRLLPLIHALESQG-VVIQLANRQYLDE- 60 I+G+HAV+A L+ +++ R+ L +G + ++L Sbjct: 75 WIWGLHAVEAALKNQSRLGPIRLYVTPDRQ----KALEQVAPKRGDLHVRLTEMAEFSGF 130 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 GAVHQG+ P N L + ++P L++LD VTDP N+GA LR+ A G Sbjct: 131 LPQGAVHQGVALNGPPLEGDDLNGLMEGALRQERPVLVMLDQVTDPQNIGAILRTCAAFG 190 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +I+ S + K A GA + VP RVTNL+R + L E +G AGEA+H Sbjct: 191 AAGLIMQDRHSPVMQGVLAKTAAGAMDRVPFARVTNLSRALESLTENGFVSLGMAGEAEH 250 Query: 181 TL---------YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVAT 231 +L Q+ L +VMG+EGEG+RRL EHCD L+ IPM G SLNVS AT Sbjct: 251 SLQAVLEQQGWRQAGSPRALVIVMGSEGEGLRRLVAEHCDHLVKIPMPGGFESLNVSHAT 310 Query: 232 GICLFEAV 239 I L+EA+ Sbjct: 311 SIALYEAL 318 >UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C1_9ACTN Length = 372 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 42/279 (15%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGR----EDKRLLPLIHALESQGVVIQLANRQYLD 59 MI G A LE +++ + + + + LI +G+ + + +D Sbjct: 90 MIEGRRACFEALEAH-LPLKKLLVQENMNAALQTADVERLITCARERGIACEYVKKSAMD 148 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLI------------------------------ 89 S HQG++ P + D+ I Sbjct: 149 SLSSHGAHQGVMFEAAPFAYAEFGDVLAAIDRKGARATDASAADASAADASAADAHELVT 208 Query: 90 -------ASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVA 142 A +++LD V D N GA +RSA+ G VI+ R A + A K + Sbjct: 209 NTDNQTAAHKQASLVVLLDHVVDEGNFGAIVRSAEVVGASCVIIANARCASVGVGAYKTS 268 Query: 143 CGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGM 202 GA +P+++V NLAR + L+E W++G + A T++ + TG++ L+MG+E G+ Sbjct: 269 AGAVLHMPIVQVVNLARAIDELKEHGFWVIGASEHAQQTVWDAPFTGKVCLIMGSEENGI 328 Query: 203 RRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L ++ CD + +P G + SLNV+ A + +E +RQ Sbjct: 329 SSLVQKKCDFICKLPQRGRIESLNVAQAATVMCYEWMRQ 367 >UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A7B5E9_RUMGN Length = 275 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 16/245 (6%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVI--------QLANRQY 57 GI V+ ER ++ + E K ++ + + + ++ + Sbjct: 37 EGIRMVRE---TPHERLVGLYFSESFEKKYGKEVLDVISGGDLKVREQIRKKTEILSDAV 93 Query: 58 LDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSAD 117 SD QG++A V I P L+ILD + DP NLG R+A+ Sbjct: 94 FSYVSDTKTPQGVLAVVHQMEYTLGQMTEGAI-----PHLMILDNLQDPGNLGTIFRTAE 148 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 AAGV +I+ +D N + GA +P + V +L T+ L+E+NI + Sbjct: 149 AAGVTGIIMSRDCVDIYNPKTIRSTMGALYRMPFVYVEDLRETIHTLKEKNIKSYAAHLD 208 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 +T + A ++G EG G+R + D I IPM G V SLN +VA + +FE Sbjct: 209 GKNTYDKEDYRQGTAFLIGNEGNGLREEIAQCADTWIRIPMCGQVESLNAAVAATVLMFE 268 Query: 238 AVRQR 242 RQR Sbjct: 269 VSRQR 273 >UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9D9_9ACTN Length = 302 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 116/241 (48%), Gaps = 1/241 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E I G A L + G D L L+ L + GV I+ R LD S Sbjct: 56 EFIEGRRAAAEALRTGFPVKCALIAEGGERDAALSRLVDDLNAAGVRIKYVPRAQLDALS 115 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQGI V D+ D A +++LD VTD N GA +RSA+ G Sbjct: 116 SHGAHQGIALEVGNFPYADVADILDR-AGDGPALVVVLDHVTDDGNFGAIVRSAEVVGAA 174 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 VI+ R+A + + K + GA +P+ +V N+AR + L+ W+ G + A+ + Sbjct: 175 GVIIANKRAAGVTVGSYKTSAGAVMHLPIAQVPNIARALDDLKAAGFWVSGASERAEGSC 234 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + GR+ALVMG+EG+G+ RL E CD L +P G SLNV+ AT FE +R+ Sbjct: 235 WDAPFEGRVALVMGSEGDGISRLVLEKCDFLTKLPQRGMTESLNVAQATTALCFEWLRRN 294 Query: 243 S 243 + Sbjct: 295 A 295 >UniRef50_A9GVZ1 tRNA/rRNA methyltransferase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GVZ1_SORC5 Length = 248 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 119/244 (48%), Gaps = 3/244 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS ++YG+ V+ + R V + + +L L E QG+ + A R LD Sbjct: 1 MSRLVYGLQPVREAIRAHGARVGWVLVQRD-GGPKLDALARLAEGQGIPTERAPRNELDR 59 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ--PFLLILDGVTDPHNLGACLRSADA 118 +S G HQG +A + +++P + + LDGV DP N GA +RSA A Sbjct: 60 RSAGGRHQGAVASAPELQIVGVDEIPVVEEGQPGAGTITVALDGVMDPQNFGAVIRSAVA 119 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G A++ P+ SA L + + GA E L RV +L + L + + + Sbjct: 120 LGARAILWPEHSSAPLTPATFRASAGAIEHARLCRVPSLPDALEALAARGVAAIALDAQG 179 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 L + +TG +A+V+GAE +G RR R C + +PM G +SSLN SVA I L+E Sbjct: 180 PVELGELPLTGPVAIVIGAEDKGTRRSVRRVCQHVARLPMTGPISSLNASVAGAIALYEV 239 Query: 239 VRQR 242 VRQR Sbjct: 240 VRQR 243 >UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8STN2_9FIRM Length = 272 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 114/244 (46%), Gaps = 18/244 (7%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKG-----REDKRLLPLIHALESQGVVIQLANRQYL 58 ++ GI + + + E+++ + ++ L L +A E + + + Sbjct: 36 IVEGIRMFREI---PVDSVDEIYMSESAYAEYCDEDDLQELYNAAE-----VTVMSDSVF 87 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 S QG +A V+ ++ D+ S D LILD + DP N+G RSA+A Sbjct: 88 AGVSQTKTPQGCMAVVRCFHY----EMTDIAGSTDTATYLILDTIQDPGNMGTIFRSAEA 143 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AG+ VI+ N + GA VP ++ +L T+ L+ + + I G + Sbjct: 144 AGITGVIIGPGSCDPYNPKVVRSTMGAIFRVPFVQSDDLIYTIDALKRKGVLIYGAHLDG 203 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + LY ++ ++A ++G EG G+ + + D L+ IPM G V SLN +++ + +EA Sbjct: 204 EE-LYDTEFPDKIAFLIGNEGNGLSKAVSDTADRLLRIPMEGKVESLNAAISATLLSYEA 262 Query: 239 VRQR 242 +RQR Sbjct: 263 MRQR 266 >UniRef50_B4W2Z7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W2Z7_9CYAN Length = 269 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 7/244 (2%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 +YG V L ++ I + + +I +GV + + +Y+ S Sbjct: 16 VYGRKPVLEALSNPDIIIDKLLIANNARGEFIDEIIKQARQRGVKVSRESPKYITRISRN 75 Query: 65 AVH-QGIIARVKPGRQYQENDLPDLIASLDQ------PFLLILDGVTDPHNLGACLRSAD 117 H QG++ V P + + S L LDGV +P N+G +R+ Sbjct: 76 GRHDQGVVVDVIPPAMEALSTYLERQQSHPPNQKPQTHKFLALDGVKNPSNVGMIIRTCL 135 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 AAG +I+P+ LN K + G A ++R L+ ++ L++ N I G +G Sbjct: 136 AAGFDGIILPRKGCPDLNPLVIKASAGTAFYTRVLRCAELSDALQQLRQANYTIYGLSGT 195 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 A TLY + V+G E EG+ R D +SIP+ SLNV+ A + FE Sbjct: 196 ATSTLYNLSFSPFSVFVLGNETEGINRDHHNLIDTWVSIPIEFPAESLNVASAAAVVCFE 255 Query: 238 AVRQ 241 RQ Sbjct: 256 LKRQ 259 >UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4I6_DESAP Length = 272 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 59/237 (24%), Positives = 100/237 (42%), Gaps = 4/237 (1%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G+ ++ L+ E ++ R + L+ + G + +Q L +D Sbjct: 32 EGLKVIEEALQAGWEVRMLLYTSDVLRHPRGVALLDKARATGTELWECEKQVLAVVTDTK 91 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QG +A + E+ L L+ P +++LDG+ DP NLG +R+ADA + VI Sbjct: 92 TPQGALALIAK----PEHSLDVLLQGRGTPLVVVLDGLQDPGNLGTIIRTADACELQGVI 147 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 + + + + GA +P + + D++LY+ Sbjct: 148 TLEGTVDLFHPKVVRASAGALFHLPAFGDLPAPAVLEFFTGAGVQKFVADPRGDYSLYEC 207 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + AL MG E G + D +++IPM G SLNV VA + ++EAVRQR Sbjct: 208 DFSRPTALFMGNEARGCGEMLHAAADRVVAIPMPGQAESLNVGVAASLFIYEAVRQR 264 >UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidaminococcus RepID=D2RLA3_ACIFE Length = 260 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 58/237 (24%), Positives = 100/237 (42%), Gaps = 12/237 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G AV+ L + +F + E E+ + L + + Sbjct: 32 LLEGKRAVEEALASGW-TIRALFFTRLPEG-----WEQQAENSSLPWYEVPLPVLQKITA 85 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 Q + A V+ R+ P+ + +L+LD + DP NLG +R+ADA G Sbjct: 86 TEDPQSVAALVELRREELAAFAPE------RGMVLVLDRIRDPGNLGTLIRTADALGAAG 139 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ ++ + N + G+ +P+ ++ + TA E + Sbjct: 140 VVLLENTADLYNPKVVRSTMGSLFHLPVFTGVKTGELEEWCRQHGYALWATALEGAEDMT 199 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + + ALV+G+E EG+ D+ + IPMAG SLNV+VA GI +FEA R Sbjct: 200 RLTWPEKTALVLGSEAEGVSPEILAAADQKVKIPMAGHAESLNVAVAGGIVMFEAAR 256 >UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMX4_CHIPD Length = 263 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 122/242 (50%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S ++ G + ++ + +F+L+G + + + E + I L + L+ Sbjct: 22 SSLVIGRQPIVEAMKAGK-AIERIFMLRGATGEIIPQIRQLAEQYNIPINLVPVEKLNGL 80 Query: 62 SDGAVHQGIIARVKPGRQYQEND-LPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + A HQG +A D + + P LILDG+TD N+GA RSA G Sbjct: 81 TS-ANHQGCVAITGNINYLDLQDVISHVTEQGQTPLFLILDGITDVRNIGAIARSAVCCG 139 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 A+I+P A LN A K + GA E++ + RV +L + + L I ++ + EA+ Sbjct: 140 AQAIIIPDRGIAALNEEAIKSSAGALETISVCRVNSLLKAIDTLHLNGIKVIASEMEAET 199 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 LY ++ +A++MG+E +G+ + D L IPMAG+ S NVSVA GI L+EA++ Sbjct: 200 KLYDCQLQEPVAVIMGSEDKGVFPALIKASDTLFHIPMAGNFESFNVSVAAGIILYEAMK 259 Query: 241 QR 242 QR Sbjct: 260 QR 261 >UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UR21_AKKM8 Length = 193 Score = 226 bits (576), Expect = 6e-58, Method: Composition-based stats. Identities = 98/162 (60%), Positives = 117/162 (72%) Query: 82 ENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKV 141 E L ++ P LLILD V DPHNLGA LR+AD AGV AVI P+D+S + T +V Sbjct: 32 EEVLDGILDKSSNPLLLILDCVQDPHNLGAILRTADGAGVDAVIAPRDKSVGITETVLRV 91 Query: 142 ACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEG 201 + GAAE VP I+VTNLARTM+ LQ IWI GT+ + D LY++ TG ALVMGAEGEG Sbjct: 92 SVGAAEKVPFIQVTNLARTMKQLQSRGIWIFGTSDKGDRGLYETDFTGPAALVMGAEGEG 151 Query: 202 MRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 MRRLT E+CD L+ IPM GS+ LNVSVATG+CL+E VRQRS Sbjct: 152 MRRLTEENCDFLLRIPMKGSIPCLNVSVATGVCLYEMVRQRS 193 >UniRef50_A8LF93 RNA methyltransferase, TrmH family, group 3 n=16 Tax=Bacteria RepID=A8LF93_FRASN Length = 386 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 90/238 (37%), Positives = 129/238 (54%), Gaps = 3/238 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDEK 61 E++ G +AV L RA ++I G + D+R+ G+ + R LD Sbjct: 140 ELVVGRNAVVEAL-RAGVPATTLYIAGGLDFDERIADARRLAGRAGLAVVDIGRFELDRL 198 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 A HQG+ V P +D+ + ++ LDGVTDP NLGA +RSA A G Sbjct: 199 CGTAPHQGLALSVPPFEYAHPDDVLAAAQAAAPGLVVALDGVTDPRNLGAVVRSAAAFGA 258 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 V+VP+ R+A + A A K + GAA +P+ R NL RT+R E +++VG A + + + Sbjct: 259 SGVVVPERRAAGVTAAAWKTSAGAAARLPVARAVNLTRTLRSFAESGLFVVGLAADGEVS 318 Query: 182 LYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 L + ++ T L LV+G+EG+G+ RL E CD + IPMAG V SLN VATGI L E Sbjct: 319 LDELQVATDPLVLVIGSEGKGLSRLVGECCDLRVRIPMAGQVESLNAGVATGIALSEI 376 >UniRef50_B8FZK3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Desulfitobacterium hafniense RepID=B8FZK3_DESHD Length = 271 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 6/241 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G V+ L R +VF +++ L AL+ +GV + + + L + SD Sbjct: 29 LIEGWRFVEEGLARGAH-LTKVFFCSECKNESWPQLAEALKVKGVPVIEVDERVLRKMSD 87 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQ---PFLLILDGVTDPHNLGACLRSADAAG 120 QGI+A VK R + +D +++ + P LLILDGV DP N G LR+A AAG Sbjct: 88 TENPQGILAVVKQSR-WTWDDFIEIVNPAGRSAIPMLLILDGVQDPGNCGTILRTALAAG 146 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V V + + N + GA S+ ++ +++ + I + E Sbjct: 147 VTQVCLTEGTVDLYNLKVLRSTMGAIFSLNIVTHCQPEEILKVCRSHKIPVFVGDVEG-T 205 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 LY++ +ALV+G EG G + + I+IPM+ V SLNV++ATGI L+E R Sbjct: 206 DLYETHFAQPMALVVGNEGNGPSAAFQGPGVKRITIPMSHQVESLNVAMATGIILYEVRR 265 Query: 241 Q 241 + Sbjct: 266 R 266 >UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma RepID=D1J7J9_MYCHP Length = 230 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 72/244 (29%), Positives = 127/244 (52%), Gaps = 16/244 (6%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M ++++G ++V +E +E+++ KG + L + + +R LD+ Sbjct: 1 MKKIVFGKNSVLEAIEYE-FPIEEIYLQKGLVNNNL---------KFKKVVYLDRNSLDK 50 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 ++ HQG A++K +Q +DL + +LILD + DP N GA +RSA+ G Sbjct: 51 LTENGNHQGYAAKLK---DFQYHDLGSIFKDGSDK-VLILDHIQDPQNFGAIIRSANVFG 106 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE-AD 179 +I+PKDR+ + + K + G ++V +I+V +L + L+ + WI +A Sbjct: 107 FKHIIIPKDRACDVTPSVLKTSSGGFKNVKVIKVNSLFDAIEELKNKGFWIYASALNQQA 166 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM-AGSVSSLNVSVATGICLFEA 238 L +K ++A+++G EG G+ + +H DE+I I SV SLNVSVATGI L+ Sbjct: 167 KKLNDAKFNEKIAIIVGNEGSGVSKTLLKHSDEIIYIEQDKESVQSLNVSVATGILLYTV 226 Query: 239 VRQR 242 ++ Sbjct: 227 FNKK 230 >UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z380_EUBE2 Length = 279 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 60/243 (24%), Positives = 109/243 (44%), Gaps = 12/243 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVV---IQLANRQYLDE 60 ++ G+ V + + ++++ + + ++ QG+ I++ D Sbjct: 45 VVEGVRMVSEV---PADLLVKIYMSERFHSNNPEYVHELVKKQGISSDSIEIVADNVFDR 101 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 S QGI+A V+ +++ + D++ D P L++++ + DP NLG LR + AG Sbjct: 102 MSQTQTPQGIMAVVR----MKDSSISDMLT--DNPLLILVENLQDPGNLGTILRMGEGAG 155 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V VI+ + N + G+ VP + V + + + + I + + + Sbjct: 156 VTGVIMSSNTVDIYNPKTIRSTMGSIFRVPFVYVQDFSDAVSQCKNAGIKVYAAHLDGKN 215 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 T A ++G EG G+ + D LI IPM G V SLN ++A I +EAVR Sbjct: 216 TYLGEDYREGTAFLIGNEGNGLTEDITKQADTLIRIPMQGEVESLNAAIACTILTYEAVR 275 Query: 241 QRS 243 QRS Sbjct: 276 QRS 278 >UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1K9_ABIDE Length = 279 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 64/248 (25%), Positives = 103/248 (41%), Gaps = 13/248 (5%) Query: 4 MIYGIHAVQALLERAP-------ERFQEVFILKGREDKRLLPL----IHALESQGVVIQL 52 ++ GI V LE E I RLL I +G + + Sbjct: 32 VVEGIKLVDEALEYGKVLEVVCAESLYNELISGDLSGNRLLAENDKNITNYVKKGSSLLV 91 Query: 53 ANRQYLDEKSDGAVHQGIIARVKPG--RQYQENDLPDLIASLDQPFLLILDGVTDPHNLG 110 + S+ QGI+A + R + L + LL+L+ DP NLG Sbjct: 92 VSDTVFKSMSETKTPQGILAVAEMPDYRLLDKGFLEQAYTKNGKIKLLVLEDTADPGNLG 151 Query: 111 ACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIW 170 +R+A+AAGV VI+ K N + G+ +P V +L T++ L++ I Sbjct: 152 TIMRTAEAAGVTGVIMGKGTVDIFNPKVVRSTMGSIFRLPFTYVEDLKETIKELKKSGIS 211 Query: 171 IVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVA 230 T + + + K +GR A+++G E G+ + D + IPM G V SLN +VA Sbjct: 212 FYATHLKGEKSYKDIKYSGRSAIIVGNEARGLSDEVADLADTYVLIPMQGKVESLNAAVA 271 Query: 231 TGICLFEA 238 + ++E Sbjct: 272 AALMMYEV 279 >UniRef50_B8H4C5 23S rRNA Gm2251 methyltransferase n=3 Tax=Caulobacteraceae RepID=B8H4C5_CAUCN Length = 278 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 121/242 (50%), Gaps = 7/242 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + I+G HAV+A L + + KRL P + L V + ++ + Sbjct: 38 KDWIWGTHAVEAALANPRRPAPKRLLATPDRAKRLAPHLQKLTCLQV---MEGQEIAKQL 94 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 GAVHQG+ ++ +L + + FL++LD +TDP N+GA RSA A G Sbjct: 95 PQGAVHQGLALKIDEPEPLTIAEL----GTPAKGFLVMLDQITDPQNIGAIFRSAAAFGA 150 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+ + L+ K A GA + P RV NL+R + L + V AGEA+ + Sbjct: 151 KGVILQDRHAPALSGVLAKTAVGAVDKAPYARVVNLSRALEELADLGWRAVALAGEAEQS 210 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L + LV+G+EGEG+RRL EHCD L IPM G SLNVS A I L+EA + Sbjct: 211 LDAVLDSQPTVLVLGSEGEGVRRLVAEHCDALGKIPMPGGFESLNVSAAAAIALYEASKV 270 Query: 242 RS 243 R+ Sbjct: 271 RA 272 >UniRef50_A1KPR5 Uncharacterized tRNA/rRNA methyltransferase BCG_3644c n=102 Tax=Actinobacteridae RepID=Y3644_MYCBP Length = 322 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 83/235 (35%), Positives = 124/235 (52%), Gaps = 2/235 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDE 60 +E + G + V L RA +++ G E D+RL + G+ I R LD Sbjct: 67 TETVLGRNPVLECL-RAGVPATALYVALGTEADERLTECVARAADSGIAIVELLRADLDR 125 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + +HQGI +V P +DL L+ LD ++DP NLGA +RS A G Sbjct: 126 MTANHLHQGIALQVPPYNYAHPDDLLAAALDQPPALLVALDNLSDPRNLGAIVRSVAAFG 185 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 H V++P+ RSA + A A + + GAA +P+ R TNL RT++ + + ++G Sbjct: 186 GHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLKGWADRGVRVIGLDAGGGT 245 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 L T L +V+G+EG+G+ RL R++CDE++SIPMA SLN SVA G+ L Sbjct: 246 ALDDVDGTDSLVVVVGSEGKGLSRLVRQNCDEVVSIPMAAQAESLNASVAAGVVL 300 >UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=Mobiluncus mulieris RepID=C2KTT3_9ACTO Length = 354 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 92/290 (31%), Positives = 141/290 (48%), Gaps = 50/290 (17%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGR-EDKRLLPLIHALESQGVVIQLANRQYLDE 60 +E+I+G + V A F+ +F+ +D +L ++ + GV ++ + LD Sbjct: 66 AELIFGRNPVSEA-AVAGVPFKRLFVASTIMKDPKLAKVVERASASGVPLRECSAADLDR 124 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLI------------------------------- 89 ++G VHQGI A + + +L DL Sbjct: 125 LTEGGVHQGIAAELCAYQYLDVMELWDLAVARAEAAGCAASAGCAVVSPAVHEVPSGVLG 184 Query: 90 ----------------ASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQ 133 P L+ LD VTDPHNLGA LRSA A G VI+P+ R+A Sbjct: 185 ETPKSDLAPHETVATKPPTHPPLLVALDQVTDPHNLGAVLRSAAAFGADGVIIPEHRAAS 244 Query: 134 LNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTG-RLA 192 +NA A KV+ GAA VP+ + TNL R ++ L+ +++G G D L ++T L Sbjct: 245 VNAAAWKVSAGAAAIVPVAQATNLTRALQDLKRAGAFVIGLDGGGDVALPDLQLTDVPLV 304 Query: 193 LVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 +V G+EG G+ RL R+ CD+++SIP+A + SLN +VATGI L++ +R Sbjct: 305 VVTGSEGRGISRLVRDTCDQIVSIPIAPRMESLNAAVATGIALYQIAVRR 354 >UniRef50_A5D0U2 rRNA methylases n=2 Tax=Peptococcaceae RepID=A5D0U2_PELTS Length = 270 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 113/239 (47%), Gaps = 4/239 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G+ V+ L A V+ + E +R L+ QGV + + E + Sbjct: 28 LIEGVRFVEEALNSAWPVEMLVYCRRITETRRGEALLEKASFQGVPLVEVDESLFGELAG 87 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QG +A VK G+ L DL A + L+I+DGV DP NLG +RSA AAG Sbjct: 88 TTTPQGALAVVKKGKV----SLEDLQAGGEPALLVIVDGVQDPGNLGTIVRSAGAAGAGG 143 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VI+ K + NA A + GA VP+++ M L++ I V D +Y Sbjct: 144 VILLKGTADIFNAKALRATMGAIFYVPVVQDVTSVEAMTYLKQLGIKAVAGDPRGDKLIY 203 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 +T ALV+G+E G E + IPM G SLNV+V++ + LFEAVRQR Sbjct: 204 DCDLTVPCALVLGSEAAGAGEPVLRMVAERVRIPMPGRAESLNVAVSSAVLLFEAVRQR 262 >UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15 Tax=Ureaplasma RepID=B1AIB3_UREP2 Length = 239 Score = 222 bits (566), Expect = 9e-57, Method: Composition-based stats. Identities = 64/232 (27%), Positives = 105/232 (45%), Gaps = 8/232 (3%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 +G A+ + + +V++L LI+ + + ++ N + + Sbjct: 5 FGKKALLDAIGN-KQSISKVYLLSKNY-----ELINLINKNKITYEIVNEAWFKQFDHSL 58 Query: 66 VHQGII--ARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQ I K ++ LI +LILD + DP N GA +R+A+ GV A Sbjct: 59 NHQNIAFKLVKKNFQKTSLESFLKLIKDKKNALVLILDEIEDPRNFGAIIRTANGFGVDA 118 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I K A +N K + GA + +I V NL+ T++ LQ+E W+ T+ Sbjct: 119 IIYKKHHQASINDLVIKTSMGAINYIYMIEVNNLSNTIKNLQDEGFWVYATSLLKSQPYE 178 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + + ++G E +G+ L ++ D+ I I M G V SLNV VATGI L Sbjct: 179 KVDYANKTVFIVGNENKGVSPLILKNADQSIRIDMFGDVQSLNVGVATGIIL 230 >UniRef50_Q6IN84 rRNA methyltransferase 1, mitochondrial n=14 Tax=Euteleostomi RepID=MRM1_HUMAN Length = 353 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 69/258 (26%), Positives = 108/258 (41%), Gaps = 18/258 (6%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRED--KRLLPLIHALESQGVVIQLANRQYLDE 60 E+++G+ L+ A + + G+ + L+ E++ + + RQ LD Sbjct: 50 ELLFGMTPCLLALQAARRSVARLLLQAGKAGLQGKRAELLRMAEARDIPVLRPRRQKLDT 109 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRSADAA 119 VHQG+ V P R + + D Q L+LDG+ DP N GA LRSA Sbjct: 110 MCRYQVHQGVCMEVSPLRPRPWREAGEASPGDDPQQLWLVLDGIQDPRNFGAVLRSAHFL 169 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 GV VI + S L K + GA E + + +L ++ ++ + GT G Sbjct: 170 GVDKVITSRRNSCPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQGWLVAGTVGCPS 229 Query: 180 H-----------TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISI-P---MAGSVSS 224 + + LV+G EG G+ + + C L++I P + + S Sbjct: 230 TEDPQSSEIPIMSCLEFLWERPTLLVLGNEGSGLSQEVQASCQLLLTILPRRQLPPGLES 289 Query: 225 LNVSVATGICLFEAVRQR 242 LNVSVA GI L QR Sbjct: 290 LNVSVAAGILLHSICSQR 307 >UniRef50_B9ILU6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ILU6_POPTR Length = 571 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 68/281 (24%), Positives = 116/281 (41%), Gaps = 42/281 (14%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKG---------REDKR-LLPLIHALESQGVVI 50 + E ++G+ V A L F ++I +G R+DK+ ++ + G+ Sbjct: 273 VGEGVFGVGPVLAALSTGRREFYALYIQEGLDLSGNNRKRKDKKGFEKVLRMAKKIGLST 332 Query: 51 QLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNL 109 + ++ L+ D HQG++ P + +L ++ ++ + LD VTDP NL Sbjct: 333 KEVSKHDLNMIVDNRPHQGLVLDASPLEMVKIQELDAVLPDEEKGSLWVALDEVTDPQNL 392 Query: 110 GACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI 169 GA +RSA G V++ SA L+ K + G+ E + L N+ + + E Sbjct: 393 GAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLVSSAENGW 452 Query: 170 WIV-GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP-------MAGS 221 ++ G+ +L + LV+G+EG G+R L C +L+ IP G Sbjct: 453 RVLGGSVSSKAVSLSEVLPGQPTILVLGSEGTGLRPLVERSCTQLVRIPGNIPVDATVGG 512 Query: 222 -----------------------VSSLNVSVATGICLFEAV 239 V SLNVSVA G+ L + Sbjct: 513 GDEVKDEEINLECSSAEFRSFLAVESLNVSVAAGVLLHHLI 553 >UniRef50_C6BUS0 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Desulfovibrionales RepID=C6BUS0_DESAD Length = 251 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 2/241 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + +I G VQ LL +PER +++ KGR+DK I + G+ ++A++ L Sbjct: 10 NTIIAGRKPVQELLLDSPERIDLLYLQKGRQDKNFERTIQRCKKYGIKYKIADKAELGRV 69 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 G HQG+IARV +D+ + +A P L++LD V DP N+G RS A G Sbjct: 70 FSG-NHQGVIARVAALPFADFDDMLENLADSPLPLLVVLDQVQDPGNVGVLARSLYALGG 128 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD-H 180 ++ K A L A K + GA +P+ RV N+++ + + I I G + D Sbjct: 129 AGIVTAKHGGAFLGPAAVKASAGALNKLPVARVNNISQALDKAIDMGINIYGAGLDDDSS 188 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + Y +++ LV+G E +G+R + C +LI IP SLNV+ A + + E R Sbjct: 189 SAYTAEIHTPAILVLGNEEKGIRFNVEKRCQKLIHIPFRRDFDSLNVAQAGAMLISEFAR 248 Query: 241 Q 241 + Sbjct: 249 R 249 >UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ96_HALO1 Length = 267 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 93/251 (37%), Positives = 129/251 (51%), Gaps = 17/251 (6%) Query: 4 MIYGIHAVQALLERAPERFQEVFI-----LKGREDKRLLPLIHALESQGVVIQLANRQYL 58 ++YG+ V+ LL R +++ + R + + +GV ++ +R+ L Sbjct: 6 LVYGVGPVEELLGRRAREIAVLYVNPSRRSRQRAGDPVAAVAEQARRRGVSVEELSREQL 65 Query: 59 DEKSDGA---------VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNL 109 D G HQG++A V DL + LD VTDPHNL Sbjct: 66 DALVAGRGDAEDGGRVHHQGVVALVGAFEYAALEDLI-AAPRQRPALFVALDSVTDPHNL 124 Query: 110 GACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI 169 GA +RSA G VI+PKDR+AQ++ KV+ GA E + + +VTNLAR + L++ + Sbjct: 125 GAIVRSAHVLGADGVILPKDRAAQVSGVVTKVSAGATEQIAIAQVTNLARALEQLKQAEV 184 Query: 170 WIVG-TAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAG-SVSSLNV 227 WI G AGE +L TG L LV+GAEG G+R L CD LI IPM G V SLNV Sbjct: 185 WIAGLAAGEGATSLPAFDATGALCLVLGAEGTGLRPLVARTCDFLIEIPMLGAGVGSLNV 244 Query: 228 SVATGICLFEA 238 SVA G+ L+E Sbjct: 245 SVAAGVALYEV 255 >UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium RepID=A5N255_CLOK5 Length = 266 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 110/239 (46%), Gaps = 11/239 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G V+ + + ++F+ + ++ + I + L S Sbjct: 31 IIEGFRFVKEAI-NSEFYISQIFLSEYFTNREERFFLERNNKVKCPIYFVTDEILRSISC 89 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGIIA VK +L +Q F ++ D + DP N+G +RSA A+G Sbjct: 90 TENPQGIIAVVKN---------KELNIKDEQGFYILADRIQDPGNMGTIIRSAHASGALG 140 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I K N + G+ +P+I+ NL + + L++ ++ ++ ++D Y Sbjct: 141 IITTKGTVDVYNEKTLRATMGSIFYIPIIQDENLEK-VSTLRQMGFKLISSSLDSDINFY 199 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + G++ + +G EG G+ + ++ D ++IPM G+ SLN +VA I +FE VRQ+ Sbjct: 200 DMDLRGKIIIAIGNEGNGLLQDVKKISDIEVNIPMPGNAESLNAAVAASIMMFEVVRQK 258 >UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clostridiaceae RepID=A8MI79_ALKOO Length = 278 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 106/240 (44%), Gaps = 6/240 (2%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M + G+ V+ ++ + ++ + + L+ + G + + Q + Sbjct: 30 MQFTVEGLRIVEECVKHNGDIAYIIYSEEIYSTQGAEKLLDKIALAGYTLYEVSSQLFSK 89 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAA 119 S QGI+A V + L ++ + + F +ILD + DP N+G +R+A++A Sbjct: 90 ISTTENPQGIMAVV----HMKNRSLEEIKSQKGKELFFVILDRIQDPGNMGTIIRTAESA 145 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 AVI+ K N+ + GA +P+I+ + R + L+E + ++ + D Sbjct: 146 NADAVIITKGSVDPYNSKTLRATMGAIFHMPIIQCDD-DRWLDDLKENEVKLIAADLDTD 204 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 T + +++G E G+ D+ + IP+ G + SLN SVA I +++A Sbjct: 205 KTYIDIDYNTSIGIIIGNEANGISEALLSKVDQRVIIPILGKIESLNASVAASILIYKAA 264 >UniRef50_A8F2F0 tRNA/rRNA methyltransferase n=16 Tax=cellular organisms RepID=A8F2F0_RICM5 Length = 256 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 9/231 (3%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 YG H V + L + + + D + ++ N L + + Sbjct: 30 YGKHPVFSALNNPKRQIDNILCTREIFDTNKKLIGTR------SYEIVNNDILSKLLENH 83 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 HQGI A+++P Y L D+ + + + ILD +TD N+GA +RSA A ++A+I Sbjct: 84 THQGIAAKIRPIFSYN---LEDIDITNPKCKIAILDQITDTQNIGAIIRSAAAFDINAII 140 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 +P+D S + K ACG E +P+I+VTNL M L++ WI+G G A+ Sbjct: 141 LPQDNSPNESGGIAKAACGTLELIPIIKVTNLRSCMNYLKKHGFWIIGLTGSANDYFTDK 200 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 ++ ++ LV G+E +G+RRL E CD L IP++ V SLNVS A I Sbjct: 201 LISDKIVLVFGSEDKGIRRLVAETCDYLAKIPISQRVESLNVSNAASIIFH 251 >UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacillales RepID=C6CVT7_PAESJ Length = 264 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 72/239 (30%), Positives = 109/239 (45%), Gaps = 10/239 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G+H VQ + + Q V R L G A Q + + + Sbjct: 33 IIEGVHLVQEAFKSSA-AVQCVVYNSERGIP--HELEQLAREGGAEWVQATTQVMAKCTG 89 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 + A ++ ++ D + +++LDGV DP N+G +RSADA G A Sbjct: 90 TDTPPPVFAVLEKLKR------DDTALFRNNSLVVVLDGVRDPGNVGTIIRSADAVGADA 143 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ K N + G+ +P+I +LA + Q + I +VGT+ +A HT Y Sbjct: 144 VVLGKGSVDLYNPKTVRSTMGSLFHLPIIEA-DLAELLPEAQSKGIKLVGTSLQATHTCY 202 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 T L+MG E EG+ R DE + IPM G SLNV++A + L+EAVRQR Sbjct: 203 TYDWTAGTWLLMGNESEGLSDAVRLAVDESVIIPMQGEAESLNVAMAATVLLYEAVRQR 261 >UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Actinobacteridae RepID=D2RCJ3_GARVA Length = 331 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 88/257 (34%), Positives = 136/257 (52%), Gaps = 18/257 (7%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDEK 61 E++ G +A L ++++ E D R ++ QG+ + A+R +D Sbjct: 68 ELVIGRNAALEALRVGVPS-TQLYVANRIEHDDRTREIVKLAGMQGLRLLEADRLEMDRI 126 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ---------------PFLLILDGVTDP 106 + HQGII +V+P + + +L + + P + LDGVTDP Sbjct: 127 AHSTNHQGIIVKVQPYQYHSLQELVERAEKKARAMEAADSDSARINARPLFIALDGVTDP 186 Query: 107 HNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQE 166 NLGA +RSA A G + VI+P+ RSA + A A KV+ GAA +P+ RV NL + ++ L+E Sbjct: 187 QNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHLPVARVVNLNKAIQGLRE 246 Query: 167 ENIWIVGTAGEADHTLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSL 225 + +G G D + ++ T L +V+G+EG+GM RLTRE CD + IP++ +V SL Sbjct: 247 RGWYAIGLDGGGDKLVGETGFETDPLVVVLGSEGKGMSRLTREACDAIAGIPISSAVESL 306 Query: 226 NVSVATGICLFEAVRQR 242 N SVA GI L+ R Sbjct: 307 NASVAAGISLYAVANAR 323 >UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clostridium RepID=B2V596_CLOBA Length = 262 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 11/238 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G V ++ + + IL ++L I + + + E + Sbjct: 31 VIEGFRLVDEAIKANLD--IDYLILTEIGYEKLDNYIDKDKIKKHKVYCITDTLFKELAS 88 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGIIA VK + + F L D V DP NLG +R+A AAGV+ Sbjct: 89 TENPQGIIAIVK---------MNNKKLDFQGDFYLFCDKVQDPGNLGTIIRTAHAAGVNG 139 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +++ K N + G+ +P+ + ++ L+++ ++ T+ E+ + Sbjct: 140 IVLSKGTVDIYNEKTIRSTMGSLFYMPIYYDDDEFSLIKSLKKDGFTLIVTSLESSKDFF 199 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + + G++ L +G EG G+ + D + IPM G SLNV++AT I ++E VRQ Sbjct: 200 KEDLKGKIILTVGNEGNGVSNEVLDLADRRVKIPMPGGAESLNVAIATSIIIYEKVRQ 257 >UniRef50_Q5FFT7 Hypothetical tRNA/rRNA methyltransferase n=4 Tax=Ehrlichia ruminantium RepID=Q5FFT7_EHRRG Length = 249 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 4/241 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKG--REDKRLLPLIHALESQGVVIQLANRQYLDE- 60 IYG H A L+ + E+ + + + + + + + + + + N ++ Sbjct: 7 WIYGKHPCVAALQNINRKCHELLVTENFIKHNNGIQKIRELSKQKNIYPKQVNINTINSV 66 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + HQGI +V D+ I + + +++LD VTD +N+G+ +RSA Sbjct: 67 LPPNSNHQGIALQVSIVDTVSIEDVLSNIPT-EISTIILLDQVTDVYNVGSIIRSAVCFN 125 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VHAVI+P S N K + GA + +P++ V N++ + L++ W G + Sbjct: 126 VHAVILPYYNSPSENCGMSKTSSGAIDMIPIVYVVNISNAIHTLKKAGYWCYGFDAKQGE 185 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 L++ K+ + ++ G+E +G+R LT+E+CD L+ I + + SLNVS A I L+ Sbjct: 186 PLHKIKLDNKRLVIFGSENKGLRTLTKENCDFLLKIATSERIDSLNVSNAAAIALYSIFI 245 Query: 241 Q 241 Q Sbjct: 246 Q 246 >UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Mollicutes RepID=Q2ST10_MYCCT Length = 244 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 60/239 (25%), Positives = 122/239 (51%), Gaps = 8/239 (3%) Query: 1 MS-EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLD 59 M+ +IYG H + LL++ +E+++ ++ +LL L++ + I + + LD Sbjct: 1 MNHNLIYGKHVIYELLKKHKNMVKEIWV----KNLKLLDEFD-LKNTKIKINVVSENKLD 55 Query: 60 EKSDG-AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 + +HQGIIA++K ++L + + + ++ +L+LD + DP+N GA +RS Sbjct: 56 QLLKTNELHQGIIAQIKDFNYTPFDELLNDLNTKEKSLVLVLDQIHDPYNFGAIIRSCSL 115 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE- 177 V +I+ + Q+N+T K + G+A + + + NL +++L+ WI T Sbjct: 116 LNVDGIIILDKKQVQVNSTVLKTSSGSAFDIKISKTNNLNNAIKILKNNGFWIYATNLNQ 175 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + +++ + +++G E +G+ L ++ D I +P ++ S N SVA I F Sbjct: 176 NSTDMTKTQFANKSVVIIGNEQKGVSELLTKNSDFNIYVPSNKNIDSFNASVACSIICF 234 >UniRef50_A7HWP6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HWP6_PARL1 Length = 288 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 90/239 (37%), Positives = 124/239 (51%), Gaps = 6/239 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +YG HAV A L + + + + E + V +++ + + Sbjct: 53 YLYGFHAVLAALANPARLAERLVLTRNAETELARQGARLPADLPVRLEIMENEDIAALLP 112 Query: 64 -GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 GAVHQGI R P DL + A +++LD VTDPHN GA LRSA G Sbjct: 113 AGAVHQGIALRASPLP-----DLDVVEACEGTNRVVVLDQVTDPHNFGAILRSAAVFGAG 167 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+I + S L K A GA E V + R+TNL R + L+E +VG GE + +L Sbjct: 168 ALITTERNSPSLGGVLAKAASGALELVRVARITNLVRAIEELKELGFEVVGLDGEGEASL 227 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 K++ R+ALV+GAEG G+RRLTREHCD L +P AG + SLNVS A + L+E R+ Sbjct: 228 PDLKLSPRVALVLGAEGAGLRRLTREHCDLLARLPAAGGMKSLNVSNAAAVALYELFRR 286 >UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9E4_BREBN Length = 271 Score = 219 bits (558), Expect = 9e-56, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 3/240 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G H V+ L+ E ++ + D + A + V + A L + S+ Sbjct: 33 LVEGAHLVEEALKSGAEVVTVIYDQQRDMDPACQRAL-ANHPEAVQVIAAPETVLAKLSE 91 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI+A VK + LL LD + DP NLG LR+A+AA + Sbjct: 92 TKSPQGIVAEVKKTAADWAKWVDQKREEQGSLLLLFLDEIQDPGNLGTILRTAEAAAIDG 151 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE-ADHTL 182 V++ N + GA +P+ +L T + + ++ ++ E + Sbjct: 152 VVLGSGSVDIYNGKVVRATMGALFRIPVFT-QSLVDTADEWKAKGGRVLISSLEQNSVSY 210 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++ G ALV+G EG G+ + D+ + IP+ G SLN +VA GI ++EA R+R Sbjct: 211 DEADYAGLTALVIGNEGRGVSKEMFAKADQFVHIPLYGGAESLNAAVAAGIFVYEAQRKR 270 >UniRef50_C5XJ83 Putative uncharacterized protein Sb03g034180 n=2 Tax=Andropogoneae RepID=C5XJ83_SORBI Length = 552 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 113/281 (40%), Gaps = 42/281 (14%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFIL----------KGREDKRLLPLIHALESQGVVI 50 + + +YG+ V A L F ++I K ++ K + ++ E G+ + Sbjct: 256 VGQGVYGVGPVLAALMARRREFYALYIQESMDLSGNNKKRKDKKAVEKVLRMAEEIGLKV 315 Query: 51 QLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDL-IASLDQPFLLILDGVTDPHNL 109 ++ L+ D HQG++ P +L + + P + LD + DP NL Sbjct: 316 IETSKHDLNMVVDNRPHQGVVLDASPLEMVNIKELDPVRVEGGKAPVWIALDEIMDPQNL 375 Query: 110 GACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI 169 GA +RSA G VI+ SA L+ K + G+ E + L+ N+ + + E Sbjct: 376 GAIIRSAYYFGAQGVILCAKNSAPLSGVVSKASAGSLELIELLSCRNMMQFLSSSAENGW 435 Query: 170 WIV-GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM---------- 218 ++ GT L + ++ LVMG+EG G+R L C L+ IP Sbjct: 436 RVLGGTIANKAVPLSEVEIGVPTILVMGSEGTGLRPLVERSCTHLVRIPGNVDVFVEGAG 495 Query: 219 ----AGS----------------VSSLNVSVATGICLFEAV 239 AG V SLNVSVA G+ L+ Sbjct: 496 ADADAGEEGDSSSSNQDLRSFLAVESLNVSVAAGVLLYHLA 536 >UniRef50_Q6UCQ6 Predicted tRNA/rRNA methyltransferase n=2 Tax=Bacteria RepID=Q6UCQ6_9PROT Length = 257 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 4/234 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 IYG HAV L EV+ E K + LE+ V+ R +D Sbjct: 18 WIYGHHAVVGALMNENRVKYEVYFTSEAEKKLKNEI--KLENINVISIKKTRDEIDLLLK 75 Query: 64 G-AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 G + HQGI RV+ + + +D + + + ++ + +LD + DP N+GA RSA A + Sbjct: 76 GISNHQGICMRVEKLQTPKLSDFINNL-NEERSIIFLLDQLDDPQNVGAIFRSALAFNID 134 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +I+ S N+ K A A + VP I++ N++ +++L++ WI G +A+ ++ Sbjct: 135 GIILTNTNSVTENSFLAKTASSALDKVPFIKIQNISSCIKILKDSGYWIYGLDMKAERSI 194 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 ++ ++ ++G+E +GMR++T CDE + I M+ ++ SLNVS I +F Sbjct: 195 TETTFPKKIVFILGSESKGMRKITDSLCDEGLKIKMSDNLESLNVSNTAAIIMF 248 >UniRef50_Q04SA9 TRNA (Guanosine-2'-O-)-methyltransferase n=4 Tax=Leptospira RepID=Q04SA9_LEPBJ Length = 253 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 9/241 (3%) Query: 2 SEMIYGIHAVQALLERA-----PERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQ 56 SE I+G + L E F ++++ + + +++ L S V + + Sbjct: 8 SEYIFGKRTLIELTEAHIGKEHSFPFTDLYVKENPGTDIVEKILNRLPSF-VKVHRISGS 66 Query: 57 YLDEKSDGAVHQGIIARVKPGRQ--YQENDLPDLIASLDQPFLLILDGVTDPHNLGACLR 114 LD G HQG++A P RQ + +L + ++ F L+LD + DP NLG LR Sbjct: 67 KLDSLVPGRNHQGVVALKSPFRQQISDKKNLEEYLSEKPGTF-LVLDRIQDPGNLGNILR 125 Query: 115 SADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT 174 +A+ GV +I+P+ SA + +KV+ GA + + V NLA T+ +L+E WIV T Sbjct: 126 TAECFGVTNIILPERESAGITPVVEKVSSGALSFLKIFTVKNLANTLELLKENGYWIVST 185 Query: 175 AGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGIC 234 + + LA++MG EGEG++R+ E D ++ IP+ G++SSLNV+VATGI Sbjct: 186 SDRGTENWSKLPELKELAILMGNEGEGVKRILLEKSDFVLRIPIHGNLSSLNVTVATGIV 245 Query: 235 L 235 L Sbjct: 246 L 246 >UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42339 Length = 281 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 16/233 (6%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G H V+ L+ A + + + + + +LPL + ++I + Q L E S+ Sbjct: 61 LIEGFHLVEEALK-AKFHIEVILMTE----QTVLPLTWEVYENDIII--VSPQVLKEISE 113 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI A L L++D V DP N+G +R+ADAAG+ Sbjct: 114 TETPQGIAAVCAIPAPPSMTTLS--------GQFLLIDRVQDPGNIGTMIRTADAAGMTG 165 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ + N+ + + G+ +P+IR +L + L+E+NI + GT+ + Sbjct: 166 VVLGEGSVDLFNSKVIRASQGSIFHMPVIR-GSLIEWVEKLKEKNIPVFGTSLTEASSYT 224 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + AL++G EGEG++ E D+ I IP+ G SLNV+VATGI L+ Sbjct: 225 AIEPQPEFALIVGNEGEGVQSELLEGSDQNIYIPIYGQAESLNVAVATGILLY 277 >UniRef50_Q1MSB5 RRNA methylases n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MSB5_LAWIP Length = 290 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 2/233 (0%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ GI V L+E+ P++ +F+ KG K ++ + + L+ Sbjct: 47 ILSGIKPVLDLIEKEPQKIDTIFLQKGLCSKEYQKVLDLCRQTNIRFIFTTSKVLNRFCL 106 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGI+AR+ + DL D + P +++ D + DP N G +R+ + G Sbjct: 107 T-NHQGIVARLFESGFIELEDLFDKVPDAPLPLIVVFDQIQDPGNAGTIIRTLYSLGGAG 165 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD-HTL 182 VI+PK L A++ A G E +P+ + NL+R + E+ I GT+ E D + Sbjct: 166 VIIPKHNGVFLGQDARRAAVGCLERLPISKAINLSRAIETANEKGFHIYGTSIEKDSKNV 225 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 +++++ L++G+E G+R ++ C ++ IPM V+SLNV+ A GI + Sbjct: 226 FEAELKFPALLILGSEKSGIRLQLKKRCHTILHIPMVRDVNSLNVAQAGGIII 278 >UniRef50_A4S7U0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S7U0_OSTLU Length = 318 Score = 217 bits (553), Expect = 4e-55, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 116/259 (44%), Gaps = 16/259 (6%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLL--------PLIHALESQGVVIQL 52 + E++YG + V L R +++ G ++ E++ V ++ Sbjct: 60 VGEIVYGTNPVLEALRRNRRALFALYVQTGEGGAANGGKGAGAESEILRLAEARAVTVKR 119 Query: 53 ANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGAC 112 A++ L+ D HQG++ + DLP + P L LD + DP NLGA Sbjct: 120 ASKHDLNMACDNKPHQGVLLDAEALEIPTLEDLPKWDGRGEPPVWLALDEIVDPQNLGAA 179 Query: 113 LRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV 172 LRSA GV V+ SA NAT K + GA E+ + + + R + ++E +V Sbjct: 180 LRSAHFLGVDGVVCCAKNSAPFNATVSKASAGAMEAQVVHQTGVMHRFLAKARDEGWDVV 239 Query: 173 GTAGEA-DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM----AGSVSSLNV 227 G A +A + + LVMG EG G+R R C+ LI IP A V SLNV Sbjct: 240 GAAADARAEDVSDFSVRAPTILVMGNEGSGLRTNVRRACNRLIEIPRSASSAAGVDSLNV 299 Query: 228 SVATGICLF---EAVRQRS 243 SVA GI + A R R+ Sbjct: 300 SVAAGILIHRLVAARRSRA 318 >UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IND6_ACIBL Length = 285 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 69/241 (28%), Positives = 116/241 (48%), Gaps = 13/241 (5%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDK--RLLPLIHALESQGVVIQLANRQYLDEKS 62 + G+H ++ + RF+ +F + ED+ +LLP IH V L + Sbjct: 54 VEGVHLLEEAIRSG-LRFKTIFFSQAAEDRAGKLLPQIH----SNVETLLLPDEVFSSAV 108 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 QG+ A VK + L DL+ + + P LL + GV DP NLG LRSA+A G Sbjct: 109 LTESPQGVAALVK----LKTFKLEDLLRA-ENPMLLGVAGVQDPGNLGTILRSAEAFGAT 163 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 V++ ++ N + + G+ +P+++V A + L+ + + I+ T+ L Sbjct: 164 GVLIGDKTASPWNPKVIRGSSGSVFRLPVVKVEWPA-ALEQLRAKGVQILATSSHKGEPL 222 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + TG +++G EG G+ R D ++IP + V SLN +A I ++EA RQR Sbjct: 223 PEVDFTGPTIVLIGGEGAGVPRDVLASVDGTLAIPHSPKVESLNAGIAASIVMYEAARQR 282 Query: 243 S 243 + Sbjct: 283 N 283 >UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHD7_CLOPH Length = 264 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 7/236 (2%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G + + + + ++V++ + + L+ G+ ++ + Q + E S+ Sbjct: 32 EGKKMFEEVASQQRNQIKKVYLAESYYHQYTKQNPEYLK--GLDFEVLSDQVMKEASETI 89 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QGI+A VK L D+ S D LL+L+ + DP NLG +R+A+ G+ ++ Sbjct: 90 TPQGILAIVKQPIYT----LKDMT-SGDSIRLLLLEDIRDPGNLGTMVRTAEGVGMTGIV 144 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 + KD N + GA VP + + ++ E I I + + Sbjct: 145 LSKDSVDMFNPKVIRSTMGAIFRVPFFYAEDFYACLNQIKNEEIAIYAAHLQGAVWYDKV 204 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 G+ A+++G E G+ + I IPM G+V SLN ++A + ++E+ RQ Sbjct: 205 SYQGKSAILIGNEANGLSDKATSLSTQRIKIPMEGNVESLNAAIAAAVLMYESYRQ 260 >UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clostridiales RepID=C7G6D1_9FIRM Length = 281 Score = 216 bits (550), Expect = 8e-55, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 95/214 (44%), Gaps = 7/214 (3%) Query: 29 KGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDL 88 K E+K ++ L G ++ + SD QGI+ +K E Sbjct: 73 KHGEEKLNRKVLERLNETG--YEIVSDNVFKSVSDTQTPQGILCVIKKPEYALEE----- 125 Query: 89 IASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAES 148 + +Q LLIL+ + DP NLG +R+ + AG+ VI+ + N + G+ Sbjct: 126 LIKGEQTHLLILESIQDPGNLGTMVRTGEGAGITGVIMNQTTVDLFNPKTIRSTMGSIYR 185 Query: 149 VPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTRE 208 VP +LA T+ L+E+ + + + + + + A ++G EG G+ + Sbjct: 186 VPFFITKDLAGTISSLKEQQVNVYAAHLKGTLSYDEPDYKKKTAFLIGNEGNGLSDEIAD 245 Query: 209 HCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 D I IPM G V SLN +++ + ++E RQR Sbjct: 246 LADTYIKIPMQGQVESLNAAISASLLMYETGRQR 279 >UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5P1_9CHLA Length = 277 Score = 215 bits (549), Expect = 9e-55, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 2/239 (0%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G + ++ + F + LI + G + + S Sbjct: 37 LIEGYRELLRAVDAGRKMETLFFCPELYLGTNEASLIQKIAKTGASLYQCTESVFKKLSY 96 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G+IA + P DL + + + PFL++ + + P NLG LR +DA G+ A Sbjct: 97 RDRPDGLIA-IAPQFHLSLEDLGKQLKNQNNPFLIVAEAIEKPGNLGTILRCSDAVGLDA 155 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +IV + N + + G +VP+I + A T++ L+++ I I+ A L Sbjct: 156 LIVCDACTDIHNPNVVRASVGTLFTVPVIE-SQGAETLQWLKQKGISILAATPHAKQELA 214 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 +TG LA+ +G E G+ E D + IPM G SLNV++AT I L+EA+RQR Sbjct: 215 DIDLTGPLAIAVGTEQLGLSPQWMEQADIQVRIPMYGIADSLNVAMATTILLYEALRQR 273 >UniRef50_Q5JKV8 Putative tRNA/rRNA methyltransferase n=2 Tax=Oryza sativa RepID=Q5JKV8_ORYSJ Length = 517 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 69/281 (24%), Positives = 112/281 (39%), Gaps = 42/281 (14%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGRE----------DKRLLPLIHALESQGVVI 50 + + +YG+ V A L F ++I +G + K + ++ E G+ + Sbjct: 221 VGQGVYGVGPVLAALMAERRDFYALYIQEGMDFSVSNKKKKDKKGIEKVLQLAERIGLKV 280 Query: 51 QLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDL-IASLDQPFLLILDGVTDPHNL 109 A++ L+ D HQG++ P +L + + P + LD V DP NL Sbjct: 281 IEASKHDLNMVVDNRPHQGLVLDASPLEMVNTKELEPVRVDDGKAPVWIALDEVMDPQNL 340 Query: 110 GACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI 169 GA +RSA G V++ SA L+ K + G+ E + L+ N+ + + E Sbjct: 341 GAIIRSAYFFGAEGVVLCAKNSAPLSGVVSKASAGSLELIELLSCRNMMQFLSSSAENGW 400 Query: 170 WIV-GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP----------- 217 ++ GT L + LV+G+EG G+R L C L+ IP Sbjct: 401 RVLGGTVAPKAIPLSEVVPGEPTILVLGSEGTGLRPLVERSCTHLVRIPGNVDGSFVGAD 460 Query: 218 -----------------MAG--SVSSLNVSVATGICLFEAV 239 M +V SLNVSVA G+ L+ Sbjct: 461 TDTDGGEEGDNYSGNQDMKSFLAVESLNVSVAAGVLLYHLA 501 >UniRef50_B0T2B4 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Caulobacteraceae RepID=B0T2B4_CAUSK Length = 278 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 84/242 (34%), Positives = 117/242 (48%), Gaps = 7/242 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + I+G HAV+A L + + KRL P + ++ + I + + Sbjct: 38 KDWIWGTHAVEAALSNPARPAPKRLLATADRAKRLAP--NLAKAPFLTIME-GAEIARQL 94 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 GAVHQG+ ++ DL + Q L++LD +TDP N+GA RSA A G Sbjct: 95 PTGAVHQGVALKIDEPEALSVYDL----GTPAQGLLVMLDQITDPQNIGAIFRSAAAFGA 150 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+ + L K A GA + + RV NL+R + L + V AGEA T Sbjct: 151 RGVILQDRHAPALTGVLAKTAVGAVDKIAYARVVNLSRALEELADLGWRAVALAGEAQQT 210 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L Q LV+G+EGEG+RRL EHCD + I M G SLNVS A + L+EA + Sbjct: 211 LDQVLDGRPTVLVLGSEGEGVRRLVSEHCDAMGKIAMPGGFESLNVSAAAAVALYEASKV 270 Query: 242 RS 243 RS Sbjct: 271 RS 272 >UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAJ1_9BACT Length = 273 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 105/240 (43%), Gaps = 6/240 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G + E E + F + + PL+ S+GV + L++ + Sbjct: 33 VLEGYRELTRAREYGMEIVEVFFAPEHFLGQNEFPLLETFASEGVKVCQVAPFLLEKMAY 92 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 +G+IA K R + L+ + V P NLG+ LRSADAAGV Sbjct: 93 RERPEGLIAIAKMKRHTLAE-----MPVRPNGLYLVAEAVEKPGNLGSMLRSADAAGVDG 147 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 I+ + N + + GA SVPL N L++ NI + D Sbjct: 148 FIICNKCTDIYNPNVIRASTGALFSVPLAEAEN-QEAYDWLKKNNIRTLAATPHTDQIYT 206 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 MT +A+V+G E G+ L EH D + IPM G + SLNV+ AT I L+EA RQR+ Sbjct: 207 DVDMTQAVAIVVGTEQTGLTELWMEHSDLPVRIPMLGKIDSLNVATATTILLYEAARQRN 266 >UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Clostridiales RepID=C4ZGM4_EUBR3 Length = 263 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 61/254 (24%), Positives = 107/254 (42%), Gaps = 30/254 (11%) Query: 11 VQALLERAPERFQE-VFILKGRE---------------------DKRLLPLIHALESQGV 48 VQALL +A ER ++ VF+++G + D R + Sbjct: 13 VQALLSKAKERKKQGVFVVEGPKMSFEAPYDWVSAVYMSESFFNDDRFKEEKKRFLDK-- 70 Query: 49 VIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHN 108 ++ + SD QG++A VK D + D+ LL+L+ + DP N Sbjct: 71 -TEIVSDSVFKSMSDTQTPQGVLAIVKMPHYE-----IDELFKGDKTELLVLESIQDPGN 124 Query: 109 LGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEEN 168 LG +R+ + AGV +I+ + N + G+ VP +L T+ + + Sbjct: 125 LGTMVRTGEGAGVSGIIMNRTTVDIFNPKTVRSTMGSLYRVPFYITDDLPETIEYAKSKG 184 Query: 169 IWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVS 228 + + + + + TG ++G EG G+ + D I IPM G+V SLN + Sbjct: 185 VSLYAAHLKGKCSYDRPDYTGACGFMIGNEGNGLSDEIADMADTYIRIPMEGAVESLNAA 244 Query: 229 VATGICLFEAVRQR 242 ++ + ++E RQR Sbjct: 245 ISATLLMYECNRQR 258 >UniRef50_Q2RQU5 RNA methyltransferase TrmH, group 3 n=3 Tax=Rhodospirillaceae RepID=Q2RQU5_RHORT Length = 348 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 120/236 (50%), Gaps = 12/236 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK-S 62 ++G HAV+A L+ K L L G ++ A+R+ ++ Sbjct: 117 WLFGRHAVEAALQNPER--------KALRLLALAGAAEGLPKGGPTVEPADREAIEAVVP 168 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 GAVHQG+ +V P Q ++ + + ILD V+DPHN+GA LRSA A G+ Sbjct: 169 PGAVHQGLALKVAPLSQPTVEEIARI---PGPSVVAILDQVSDPHNIGAVLRSAAAFGIR 225 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AV+V S + T K A G E VPL+R NL++ + +E W G A+ TL Sbjct: 226 AVVVQDRHSPEETGTLAKSASGTLERVPLVRAINLSQALDTFKEHGFWCAGLDASAETTL 285 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 ++ + R +V+G+EG G+RRL R+HCD L+ + M V SLNVS A + +E Sbjct: 286 AEAALPERCVVVLGSEGAGLRRLVRDHCDLLVKLAMDSGVESLNVSNAAAVTFYEL 341 >UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Thermoanaerobacterales RepID=B0K3L2_THEPX Length = 254 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 111/239 (46%), Gaps = 19/239 (7%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 + G +V L+ F+ +I+ G K +P + I + + SD Sbjct: 30 FVEGTTSVLEALKSN---FEIEYIVMGEGVKIDIP------TGNFKIVHTTERVFKKISD 80 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 Q ++A +K + ++ + D + +I D + DP NLG +R+ADA G A Sbjct: 81 TVTPQMVMAIIKIPKYEEDTYIKD------KGIYIIADNIQDPGNLGTIIRTADAFGASA 134 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 + + N + + G+ +P+I ++ + L++ I + T +A ++ Sbjct: 135 IFTINNCVDVFNPKVLRASMGSIFHIPVI--VTASQILLKLKQRGIKVFATHLKARKLVH 192 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + ++ ++A V+G E +G+ + D+ + IPM G SLNVS+A GI L+E+ RQR Sbjct: 193 ECNISDKVAFVLGNEAKGVS--VVDLVDDFVKIPMTGEAESLNVSIAAGIFLYESQRQR 249 >UniRef50_UPI0000ECA455 rRNA methyltransferase 1, mitochondrial precursor (EC 2.1.1.-). n=2 Tax=Gallus gallus RepID=UPI0000ECA455 Length = 317 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 18/259 (6%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLL--PLIHALESQGVVIQLANRQYLD 59 SE+++G+ L +A +F+ + +RL+ + ++GV + R+ LD Sbjct: 54 SEILFGVAPCSMALSQARRDLFRLFLKRSGGPQRLVTSEFVLQAAARGVPVLHVGRRELD 113 Query: 60 EKSDGAVHQGIIARVKPGR-----QYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLR 114 G VHQG+ P R + +E L D + Q L L+ + DP NLGA LR Sbjct: 114 TLCGGRVHQGVCLEATPLRFKRLEEAEEPGLGDGESPNRQLLWLALEQIQDPMNLGALLR 173 Query: 115 SADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT 174 SA GV V+ + S L T K + GA E + +L ++ E +VGT Sbjct: 174 SAYFLGVDRVVTSQRNSCPLTPTVSKASSGAMEVFDVYSTDDLRSFLKAKAAEGWEVVGT 233 Query: 175 AGEADH-------TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP----MAGSVS 223 +++ + + + + LV+G+EG+G+ T+ C +++ IP + + Sbjct: 234 VSQSETVENVPVISCLEFRWNKPIILVIGSEGDGLSLETQLLCHQMLVIPSGRALHPGIE 293 Query: 224 SLNVSVATGICLFEAVRQR 242 SLNVSVATGI L Q+ Sbjct: 294 SLNVSVATGILLHSICSQK 312 >UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXH9_MYCAP Length = 233 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 76/239 (31%), Positives = 123/239 (51%), Gaps = 14/239 (5%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G ++V ++ A + V++L +L + I + + + E + Sbjct: 7 CGKNSVIDAIK-AKLPIEAVYVLSKSHADKLKEF------SNIKIVVKDASFFKE-YNSE 58 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 HQG + +K Y+ D+I + +LILD + DPHN GA +R+A+AAG+ +I Sbjct: 59 NHQGYLLFLKDFNYYEI----DVIKKDNPKTVLILDHIHDPHNFGAIIRTANAAGIKHII 114 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADHTLYQ 184 +PKDRS + +T KV+ G V +I+V+N+A ++ L++ WI + E + Sbjct: 115 IPKDRSTDVTSTVLKVSSGGFVGVKIIKVSNIASSIEKLKKWGFWIYSSLLDENAVPYNK 174 Query: 185 SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 + G ALV+G E +G+ + D + IP G+V S+NVSVATGI LFE V RS Sbjct: 175 VQYAGNCALVVGNEEKGISKPVVNATDVKVYIPQFGTVQSMNVSVATGILLFELV-NRS 232 >UniRef50_C6HZU7 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZU7_9BACT Length = 259 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 121/256 (47%), Gaps = 25/256 (9%) Query: 7 GIHAVQALLERAPERFQEVFILKGRE-----DKRLLPLIHALESQGVVIQLANRQYLDEK 61 G H V +L P+ +++ + R D R +I S+G+ + +D Sbjct: 3 GFHPVMEVLSLRPDSVVHLYLREDRHGESRMDGRRREIIRVARSRGIPVDFLPGPAIDGL 62 Query: 62 SDGA---------------VHQGIIARVKPGRQYQ-ENDLPDLIASLDQPFLLILDGVTD 105 HQG++AR++ + +D + + L+ +DGV D Sbjct: 63 FHRGQVSATASGGTGKGLPSHQGVVARIEEVATFPNLDDFLEASPGIAPSPLVAVDGVQD 122 Query: 106 PHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQ 165 P NLGA LR+ DAAGV V++P+ R A L+ T K + GA ++PL+R+ NL+ ++R L+ Sbjct: 123 PRNLGALLRTCDAAGVGGVLIPRRRVAPLSQTVAKTSAGALFTLPLVRIGNLSGSLRQLK 182 Query: 166 EENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSL 225 +E I D L LV+GAE +G+ R + D +PM G V SL Sbjct: 183 KEGYAIAALDLSGDPLPEGPLPGP-LVLVVGAEEKGVTRPVLDLADWRFRLPMKGKVQSL 241 Query: 226 NVSVATGICLFEAVRQ 241 N+SVA GI L+ RQ Sbjct: 242 NLSVAAGIFLY---RQ 254 >UniRef50_A6Q869 RNA methyltransferase, TrmA family n=7 Tax=Proteobacteria RepID=A6Q869_SULNB Length = 263 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 110/234 (47%), Gaps = 5/234 (2%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHA-LESQGVVIQLANRQYLDEKSD 63 IYG +AV LE ++ + K +D +L + +G+ +Q ++ L S Sbjct: 32 IYGRNAVLEALEDPDITIHKLHLSKSNKDAPVLEQMKKIASKRGIEVQYHDKASLSRISK 91 Query: 64 GAVH-QGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 A QG+ + D D I+ ++ LDGVT+P NLG +RS A + Sbjct: 92 NAKQDQGVALDI---VLEHFGDEKDFISKNINYRIIALDGVTNPQNLGMIIRSCAAGNID 148 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+++P +AQ++ K + G + +I+ +NL T++ ++E + + AD + Sbjct: 149 AILLPTKGAAQISPLVIKASVGTLFKMSIIKTSNLKETLKHFRKEGASLYTLSSHADKSY 208 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + + + V+G E EG+ + C+ I+IPM V SLNV+V + F Sbjct: 209 KEQIYSEKTIFVLGNESEGVSPAVEKLCNASIAIPMQRGVESLNVAVTASLLAF 262 >UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CKU5_9FIRM Length = 279 Score = 212 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 23/255 (9%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G V+ + ER + ++I + E K + G+ ++ + SD Sbjct: 30 LVEGPRMVEEI---PKERIERLYISESFERKNPAYI----RELGMPAEVLSDPVFSYVSD 82 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQ----------------PFLLILDGVTDPH 107 QGI+A VK E+ L ++ P +++LD + DP Sbjct: 83 TKNPQGILAVVKRLEYTMEDVLGKSALKCEEKSGEKEKNPENHQIRVPHVIVLDNLQDPG 142 Query: 108 NLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE 167 NLG R+A+AAG +++ D N + GA +P V +L ++ L + Sbjct: 143 NLGTIFRTAEAAGATGILLSSDSVDVYNPKVIRSTMGAVFRMPFFYVKDLPAAVKSLSSQ 202 Query: 168 NIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNV 227 I + + T A ++G EG G+R E D LI IPM G SLN Sbjct: 203 GIRTYAAHLNGKNVYDEEDYTEGCAFLIGNEGNGLRDEVSECADCLIRIPMCGKAESLNA 262 Query: 228 SVATGICLFEAVRQR 242 +VA + +FEA RQR Sbjct: 263 AVAAAVLMFEAGRQR 277 >UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=B2S257_TREPS Length = 292 Score = 212 bits (542), Expect = 7e-54, Method: Composition-based stats. Identities = 88/279 (31%), Positives = 129/279 (46%), Gaps = 40/279 (14%) Query: 4 MIYGIHAVQALLERAP-----------------ERFQEVFILKGREDKRLLPLIHALESQ 46 +I G+ A++ L P + + + E+ R+ L+ ++ Sbjct: 2 VISGLRAIEEFLRAQPAALEGLHAGGKNSKTQQSCVRVLTLYYAAENARIKRLLGMAAAR 61 Query: 47 GVVIQLANRQYLDEKSDGAV-----HQGIIARVKPGRQY----------------QENDL 85 G+ I LD+ + H+GI+A + QE L Sbjct: 62 GIRITHTTCAVLDKLARSLPPALRDHRGILAVLSSPSATPQGSHTRKKRPAVDSSQERTL 121 Query: 86 PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGA 145 +A+ +L+LD +TDPHN+GA +RSAD V AV++P A T +V+ GA Sbjct: 122 LHALATHTHALVLVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGGTETITRVSAGA 181 Query: 146 AESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRL 205 VPL+RV NL RT +L+ W+ G + + + ALV+G EG G+ L Sbjct: 182 VAWVPLVRVRNLVRTAGILKRSGFWLYGADVAGEA-IGARTFPPKTALVLGNEGHGVSPL 240 Query: 206 TREHCDELISIPMAGSVSSLNVSVATGICLFEAVR-QRS 243 R HCD LISIP G+V SLNVSVA GI L+E R Q+S Sbjct: 241 LRTHCDALISIPTQGNVDSLNVSVAAGILLYEIRRSQQS 279 >UniRef50_B3S0S7 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S0S7_TRIAD Length = 267 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 75/251 (29%), Positives = 127/251 (50%), Gaps = 17/251 (6%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKG----REDKRLLPLIHALESQGVVIQLANRQYL 58 E+IYGI Q L+ + +++ + +K + +I G+ + ++++YL Sbjct: 8 EIIYGIAPCQLALKADRRKIYHIYVRDPAGTLKPNKSIEHIIFKARKLGIHVLPSDKRYL 67 Query: 59 DEKSDGAVHQGIIARVKPGRQ-YQENDLPD-LIASLDQPFLLILDGVTDPHNLGACLRSA 116 D+ ++G HQG+ + P R +DL +A+ + L L+ V DP NLGA +R+A Sbjct: 68 DKLTEGRPHQGVAMKATPLRPNLIRHDLDKTAMANNRKALWLGLNDVQDPMNLGALIRTA 127 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 GV+ V+V ++A+L+A K + GA E P+ V NL++ + L E + I+GT G Sbjct: 128 ALMGVNRVVVNSRKTARLSAVVSKASAGAMEVYPIYAVKNLSKYLDYLVENDWNIIGTVG 187 Query: 177 EADHTLYQS----KMT---GRLALVMGAEGEGMRRLTREHCDELISIPM----AGSVSSL 225 + YQ+ L++G EG G+ +E C+ ++IP + SL Sbjct: 188 HKEVNQYQAMSCQNFNHNGKPTILMLGNEGFGISASIKEKCNSFLTIPTSSSCPPDIDSL 247 Query: 226 NVSVATGICLF 236 NVSVA GI L+ Sbjct: 248 NVSVAAGILLY 258 >UniRef50_C6XLJ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XLJ1_HIRBI Length = 272 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 82/240 (34%), Positives = 123/240 (51%), Gaps = 10/240 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK-S 62 I+G+HAV + L+ + F + K L H QLA+ + +D+ Sbjct: 35 WIWGVHAVASALKNNSRKKIRAFFTRNGAQKLGLDAEHLPHYA----QLADPKDIDKLVP 90 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 +VHQG++ R+ D D++A+ + P ++ILD VTDP N+GA RS A G Sbjct: 91 PDSVHQGVVLHA---RELDGVDFEDVLANGEGP-IVILDQVTDPQNVGAVFRSCAAFGAK 146 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AVI+ S L K A GA + +P + V N++R + L + W+VG G + + Sbjct: 147 AVIMQTRNSPNLGGALAKAAVGAIDIIPEVAVVNISRAVTALSDAGWWVVGMDGNTEIDI 206 Query: 183 YQS-KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 Q+ LA+VMGAEG G+R L + C +L I ++ + SLNVS A I L+EA RQ Sbjct: 207 AQAFDTPAPLAIVMGAEGSGIRPLIAKGCSQLAKISISPQMESLNVSSAASIALYEANRQ 266 >UniRef50_B2IK44 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Beijerinckiaceae RepID=B2IK44_BEII9 Length = 293 Score = 212 bits (541), Expect = 8e-54, Method: Composition-based stats. Identities = 72/233 (30%), Positives = 112/233 (48%), Gaps = 10/233 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +++G HAV+ L ++ + +K L ++ G+ + + L + Sbjct: 64 LLHGFHAVREALRSDQRTCLALYATEAAAEK----LAPDSKAAGLAPHIVTAEDLSRRLG 119 Query: 64 GA-VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 VHQG++ +P ++P +L+LD +TDPHN+GA +R+A A V Sbjct: 120 SQTVHQGVLLEARPLEPLDITEIP-----TRSGVVLVLDQITDPHNVGAIVRTAAAFDVD 174 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A++ + + L K A G E V ++ V NLAR + L N VG A+ Sbjct: 175 AIVTTERHAPALGGVLAKAASGGLEHVQIVPVVNLARALETLGRLNYLRVGLDSAAEADF 234 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 Q + +ALV+G EG G+RRLTRE CD L + M G + SLNVS A + L Sbjct: 235 TQLPLQRPIALVLGGEGTGLRRLTREKCDFLARLDMPGKIKSLNVSNACAVVL 287 >UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostridiales RepID=A8S2F6_9CLOT Length = 270 Score = 212 bits (541), Expect = 9e-54, Method: Composition-based stats. Identities = 49/240 (20%), Positives = 102/240 (42%), Gaps = 10/240 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ G+ + L PE +++ + D + + + ++ + Sbjct: 30 VVEGLRMCREL---NPEDVDALYVTENFAGDADNRKWMGRFR-----PETVSDVVMNVMA 81 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 D QG++A V+ R Y +D+ +++L+ + DP NLG +R+ + AG+ Sbjct: 82 DTQTPQGVLAVVRQKR-YTMDDIVKPAPDGRSLAIMVLETIQDPGNLGTIIRAGEGAGIT 140 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +++ D + N + G+ +P + +L +++ + + + + Sbjct: 141 GIVMNHDTADIYNPKVIRSTMGSIFRMPFVYADDLQDACLLMKNRGVRLFAAHLKGMNNY 200 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 Q T + ++G E G+ T D L+ IPM G V SLN ++A + +FE RQR Sbjct: 201 DQEDYTDNVGFLIGNEANGLTEETTSLADCLVKIPMEGKVESLNAAIAASVLMFETARQR 260 >UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID=C9XLS4_CLODC Length = 265 Score = 212 bits (540), Expect = 9e-54, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 8/238 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKR-LLPLIHALESQGVVIQLANRQYLDEKS 62 +I G V LE VFI + E+K+ + L+ L+ + I + E Sbjct: 32 IIEGYRIVMLALECMA-NLDYVFINEEFENKKEHVKLLEDLDKKNTKIYKTTNKNFKELV 90 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 D QGII V +++ L + I D+ F+LILD + DP N+G +R+AD+AGV Sbjct: 91 DTENTQGIIGVVS----FKKKKLSESINKKDK-FVLILDRIQDPGNMGTIIRTADSAGVD 145 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+I K N + G+ + +I + T+ ML+ + IV + ++ Sbjct: 146 AIIALKGCVDIYNPKVIRSTMGSIFDMNIIDASQ-DETVDMLKSLDFNIVSSYLNTENFY 204 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + ++ALV+G E G+ D L+ IP+ G SLN ++++ I ++E + Sbjct: 205 DKIDYGSKVALVIGNEANGINEELVSKSDILVKIPIYGKAESLNAAISSAILMYEIKK 262 >UniRef50_C6WJ30 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJ30_ACTMD Length = 248 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 116/240 (48%), Gaps = 5/240 (2%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 +YG V L+ +V + +G ++ A +GV +Q A Q + + Sbjct: 12 VYGRKPVLEALDDPRLEVDKVLMAEGARGPAAKEILDAASRRGVRVQRATAQRVKVLAGN 71 Query: 65 AVH-QGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 H QG++A V R L + S + +L+LDG+T P N+G LR+A AAGV Sbjct: 72 GRHDQGVLADVVAPRMAP---LALALESRPRG-VLLLDGITTPANVGMILRTATAAGVEG 127 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 ++VP+ A ++ K + G A P++R A L+ + A ++Y Sbjct: 128 IVVPRRGVASIDPLVVKASAGVAFRAPVLRCGTAAEAAAQLRAAGYPLFALDASAKRSVY 187 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 +++ R A V+G+E G+ REH + +SIPMA V SLNV+ A + FE VR+RS Sbjct: 188 AAELPERAAFVLGSETAGVSDGVREHVTDWLSIPMAAGVESLNVASAAAVLCFEVVRRRS 247 >UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPH3_OCEIH Length = 246 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 19/237 (8%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I GIH +Q L+ QE+ +++G E +++ V + + L E S Sbjct: 29 LIDGIHLIQEALKSNW-VIQELIVVEGYELPN--------DAKDVPVAYVSENVLKEISQ 79 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QG+IA V+ + D +++LD + DP N+G +R+ADAAGV A Sbjct: 80 TQTPQGVIAVVEMNIPKVQED---------NNLIILLDAIQDPGNMGTIIRTADAAGVDA 130 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ N + G+ +P+ T L + + MLQ + I+ TA Sbjct: 131 VVLGDGCVDIFNDKVIRATQGSIFHIPIYTAT-LEQEIHMLQTQGFTILATALHDAVEYT 189 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + + ++ L++G EG G+ ++ I+IP+ G SLNV +A GI ++ + Sbjct: 190 EVSVHNKVGLILGNEGAGIAPSLLNKANQRINIPIYGKAESLNVGIAAGILMYHLKK 246 >UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZH70_PLALI Length = 271 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 24/259 (9%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGR---EDKRLLPLI------------------HA 42 I+G H V A + E+ R D P++ + Sbjct: 12 WIWGRHLVSATIHAKYWIPLELHYDSHRFSPHDPLGDPIVGDFPLGDSIEEAHSTSLKNL 71 Query: 43 LESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDG 102 E+ G+ + + L HQG+ AR+ ++ D L + L+ILDG Sbjct: 72 CEAVGIQLVASTADQLSRLIRAEDHQGLAARM---PEFPYADFEGLFQAQLPALLVILDG 128 Query: 103 VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMR 162 + D NLGA +R A+A G +++P+ + +N+ A + + GA +P+ RV L R + Sbjct: 129 IQDSFNLGAIIRCAEALGAGGIVLPEKGQSGVNSQAARSSAGAVNFLPIYRVPALDRAID 188 Query: 163 MLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSV 222 L+ + I+ +++ +L+ + L L++G EG+G+ CD + IPMAG Sbjct: 189 QLKSRGMKILAATEKSEQSLWNVVIPAPLCLIIGNEGKGVSSALLSACDIQVRIPMAGQT 248 Query: 223 SSLNVSVATGICLFEAVRQ 241 SSLN +VA GI L E RQ Sbjct: 249 SSLNAAVAAGILLAEIQRQ 267 >UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KW83_9FIRM Length = 260 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 56/254 (22%), Positives = 111/254 (43%), Gaps = 27/254 (10%) Query: 6 YGIHAVQALLERAPERFQE-VFILKGRE----------------DKRLLPLIHALESQGV 48 G+ ++ L ++A +R+++ +F+ +G + L +E + Sbjct: 10 EGLKEIRELTKKAKKRWEKGMFVAEGERLLLDLPASSLLQLYVQEDYKGALPRGIEKEDS 69 Query: 49 VIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHN 108 I + +++ ++ S QGI+ ++ ++ LIL+ + DP N Sbjct: 70 RICILSKKAMESISTTEHGQGILGLLRFPKK----------EKPKGDLFLILENIQDPGN 119 Query: 109 LGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEEN 168 LG R+A+AAGV+ + + ++ + + G+ +P +L L+ Sbjct: 120 LGTLFRTAEAAGVNHIFLSRNTVDPFSPKVVRSTMGSLFRLPFSIEEDLFFLCESLKSAG 179 Query: 169 IWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVS 228 + + + T +Q+ G A + G EG G+ + + E + IPM G + SLNV+ Sbjct: 180 VQVFALDLDGKKTHFQAAFQGPSAFLFGNEGNGLTKELSQCATEKLLIPMEGKIESLNVA 239 Query: 229 VATGICLFEAVRQR 242 + I L+EAVRQR Sbjct: 240 TSASIVLYEAVRQR 253 >UniRef50_C6V4C7 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Neorickettsia RepID=C6V4C7_NEORI Length = 243 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 72/235 (30%), Positives = 118/235 (50%), Gaps = 6/235 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I+G HA A ++ +FI + ++ LPL+ + N Q Sbjct: 7 VIFGKHAAVAAIKNPERNILSIFIAREKK-AVYLPLLERSRLPNISFCE-NTQIAKICGR 64 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 A+HQGI + Q + D+ L + + ++ILD +TDP N+G LRS+ A GV A Sbjct: 65 DALHQGIAVITEKLSQPELRDV--LKNTNKRSLVMILDSITDPFNVGNILRSSKAFGVDA 122 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 ++V + S + K A GA ES+P+ + NL +++LQE + G A L Sbjct: 123 IVVKQRHSPSETSVIAKTASGALESIPVCTIANLTNAIKILQENGYFCYAMDGGASSKLT 182 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAG--SVSSLNVSVATGICLF 236 + + ++A V+G+EG+G+ L + CD+ +SIPM + S+NVS A I +F Sbjct: 183 EIRFPNKVAFVLGSEGKGISHLLKTRCDQTLSIPMYADKNFDSINVSNAAAIAMF 237 >UniRef50_Q0BYS7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYS7_HYPNA Length = 269 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 86/239 (35%), Positives = 123/239 (51%), Gaps = 14/239 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLD-EKS 62 ++G HAV A L +F + + K L + + QLA + +D Sbjct: 37 WLWGTHAVMAALANPARKFHTLLATENAAQK--------LPAGVISPQLATAKEIDNRLP 88 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 GAVHQGI R P +E L D+IA+ + +LD V+DPHNLGA RSA A G Sbjct: 89 PGAVHQGIALRADP---LEEAILEDVIAAG-ATRIAVLDQVSDPHNLGAIFRSAAAFGFE 144 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +++ + + K A GA E+V IR N+AR + L E + VG AGE+ +L Sbjct: 145 GLVLQTRNAPPITGIVAKSAAGAIETVTEIRAVNIARALEQLAEADFHTVGLAGESTRSL 204 Query: 183 YQS-KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++ K ++A+V+GAEG G+R + C EL IP+A + SLNVS A I +EA R Sbjct: 205 DEAVKGAAKVAIVLGAEGSGLRPAVAKACSELARIPIAAQMESLNVSNAAAIAFYEASR 263 >UniRef50_A3VTQ4 RRNA methylase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTQ4_9PROT Length = 243 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 79/240 (32%), Positives = 120/240 (50%), Gaps = 14/240 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQG--VVIQLANRQYLDE- 60 +YG H V+A L ++ + + L+ +G + I + +D+ Sbjct: 13 WLYGRHTVEAALGNPQRHQVKLLATRNA--------LGWLKERGRTITIDPVTPKDIDKA 64 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 GAVHQG+ P L +++ + + LL+LD +TDP N+GA R A A Sbjct: 65 LPPGAVHQGLAMLANP---LPSPSLAEILENGETGPLLVLDQITDPQNIGALFRLAAAFS 121 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 AVI R+ L K A GA E VP I V N++R + ++E++I I G AGE Sbjct: 122 AKAVIAQDRRTPPLGGPLAKAATGAVECVPFIPVVNISRALEAIREKHIPIFGLAGEGAL 181 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +L + T ALV+GAEG+G+R R CD+L++IP+ + SLNV+ A I L+ R Sbjct: 182 SLRDTAPTRTCALVLGAEGKGLRPGVRAVCDQLVAIPIDPQIESLNVATAAAISLYHLGR 241 >UniRef50_B3CT02 tRNA/rRNA methyltransferase, TrmH family n=2 Tax=Orientia tsutsugamushi RepID=B3CT02_ORITI Length = 266 Score = 209 bits (534), Expect = 6e-53, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 118/240 (49%), Gaps = 10/240 (4%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S I+G HA A L + ++ + L L ++ I ++L + Sbjct: 30 SYYIFGTHASLAALNNPLRVIRYIYCTESC----FLSLSKLIQKHDYKI--VTTKFLHQL 83 Query: 62 SDGA-VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 VHQGI P N + + + + ILD + D +NLGA +RSA A Sbjct: 84 LGSQIVHQGIAVNTIP---LTINGIKHIDLATPNYKIAILDQLLDHNNLGAIIRSAAAFN 140 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 + +I+P++ S + N T K+A GA E + L++V NL T+ L++ WI+G + Sbjct: 141 ISTIILPENNSIEENGTIAKIAVGALEKINLVKVKNLYNTINYLKKYGFWIIGLDLNNSN 200 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 L + ++A V+G+E +G+R LTR+ CD LI IPM+ SLNV+ A I +E+ + Sbjct: 201 QLTEQTFHSKMAFVLGSENKGLRNLTRQQCDFLIKIPMSHKTESLNVAGAATIIFYESFK 260 >UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS4_UNCTG Length = 255 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 17/240 (7%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 + G + + + +++FI + ++ + L++ + + + + S Sbjct: 30 FVEGKKQIYEIPKN--RTIKQIFISEKYKND-----VTNLKN----VIMLSNHLFSKLSA 78 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI+A V+ E+ + + ++L+ + DP NLG +RSADA G A Sbjct: 79 TKSPQGIMAIVEKKYYAVEDII------KNSGLFILLENIQDPGNLGTIIRSADAFGAKA 132 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V V K + + + G+ +P+I N+ T+ +++ + I + + + + L Sbjct: 133 VFVSKGSADIYSDKTIRATMGSIFHLPIIDSINIKNTLNLMKNKKISVFAASLKGEKYLN 192 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 K + A V+G E G+R T D L+ I M G+ SLN + A I ++EA + R+ Sbjct: 193 DIKFPNKSAFVIGNEANGLRSETENSADTLVKIYMPGNTESLNAATAASIIMYEAAKNRT 252 >UniRef50_D2MNZ0 RNA methyltransferase, TrmH family n=1 Tax=Bulleidia extructa W1219 RepID=D2MNZ0_9FIRM Length = 237 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 8/240 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G +V+A LE +++ ++D+ L ++ V + R+ ++ + Sbjct: 2 IIEGATSVKAALEAKKRVVNALYVDDKKKDRNLNYILFKAHEAHVPVYRLKREEINTLAF 61 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G H G++A V E + D + FLL+L+GV DP N G +R+A +AGV Sbjct: 62 GKTHGGLLADV-------EERIMDHLEISRSSFLLVLEGVVDPFNFGYMVRTAYSAGVDG 114 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +++P+ L + K + GA + +I +LA+ +R+L+E+ I + Sbjct: 115 ILIPEYHWHDLESVILKSSAGAFDHCSIIPSKDLAQDLRLLKEKGFTIYAGYRDNAIVYD 174 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSV-SSLNVSVATGICLFEAVRQR 242 ++ T +G E G+ + E D+ + IP A ++LN + A + FE +RQR Sbjct: 175 EADYTNPTVFCVGGELRGLSKQVLEQVDQAVYIPYANGFKNALNAASACSVFCFEVLRQR 234 >UniRef50_Q4A651 Putative tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma synoviae 53 RepID=Q4A651_MYCS5 Length = 233 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 63/236 (26%), Positives = 121/236 (51%), Gaps = 14/236 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 I G ++ +E + +++ K + ++ +++ + L + ++ Sbjct: 5 FIGGKNSTLDAIES-KLNLKRIYLSKKEN-------LKYFKNTNFKVEILSNLELSKLTN 56 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 A HQG +A + + +D+ + S + +L+LD + D +NLGA +RSA+AAG+ Sbjct: 57 NANHQGFVAELD----FTYSDINKIYESKPK-IVLVLDHIMDTYNLGAIIRSANAAGIKD 111 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA-DHTL 182 +++PK+ A + + KV+ G + +V++L + L++ + WI G+ + + Sbjct: 112 IVMPKENCADITSNVLKVSSGGFIGINFYKVSSLNAFLNKLKKHSYWIYGSMLDKNSTSY 171 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 Y +K +A ++G E +G+ + DE I IP +GSV SLNVSVA GI LF+ Sbjct: 172 YSAKYNFPMAFILGNEEKGISKSALVEVDEKIHIPQSGSVESLNVSVAAGILLFDI 227 >UniRef50_Q7BKE9 Predicted rRNA methylase n=4 Tax=Bacteria RepID=Q7BKE9_PRB01 Length = 240 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 84/243 (34%), Positives = 128/243 (52%), Gaps = 12/243 (4%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +++ G H+++++LE +P + +++ + RED R+ LI +E + + +N+ + + Sbjct: 6 NDLRVGFHSIESILEHSPHKIKKITLPAKREDGRITKLIQKIEENKIPFEFSNKVKQEPE 65 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIAS--LDQPFLLILDGVTDPHNLGACLRSADAA 119 A + + DL + S P +LILD + DP NLGAC+RSA Sbjct: 66 ----------AYISSDLEMNFKDLKLFLDSDKAQNPLILILDNIIDPRNLGACIRSAAVI 115 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 GV A+I+ K A +N+ A KV+ G AE + + VTNL ++ LQ NI I G + A Sbjct: 116 GVDAMIINKHHCAPINSIAHKVSVGGAEVIKIFHVTNLVNCLKYLQGININIYGLSEHAS 175 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + T A++MGAE G+R T E CD I++ S NVSVATGI L EA Sbjct: 176 KSHTDYNFTEASAIIMGAEESGVREKTLERCDHKINLSSNKLFKSFNVSVATGIILSEAS 235 Query: 240 RQR 242 RQR Sbjct: 236 RQR 238 >UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halothermothrix orenii H 168 RepID=B8D292_HALOH Length = 270 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 9/238 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G + RF +F+ I + + + L +D Sbjct: 32 ILEGYRLIMEA--CGKARFDRIFMTPYFAKTDEGEEIIRKFKDHIPVHFVTGKLLYNVAD 89 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI A + L + ++ +LILD + DP N+G +R+A AAG+ Sbjct: 90 TENPQGIAAIT----YVPRSGANILFHNRNRGIILILDRIQDPGNMGTIIRTAVAAGIEG 145 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE--NIWIVGTAGEADHT 181 +I K N + + GA S+P++ + R ++ +++E + ++ T Sbjct: 146 IICLKGSVDIYNLKVIRASMGAIFSIPILTGVSFKR-LQKIRDEYPDYKLICTDLNTSKF 204 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 ++ L LV+G E G+R D I IP+ G++ SLN +V+T I L++ V Sbjct: 205 YHEIDYQEPLMLVIGNEARGIREELLSLADIKIKIPLMGNIDSLNAAVSTAIVLYDIV 262 >UniRef50_Q7NAH8 SpoU n=2 Tax=Mycoplasma RepID=Q7NAH8_MYCGA Length = 260 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 69/236 (29%), Positives = 110/236 (46%), Gaps = 10/236 (4%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 ++G + V L + ++V++ K PL+ ++ +G+ +L ++ D + Sbjct: 24 LFGYNGVYEGLINN-LKIKKVYLHKEDH-----PLLKLIKQKGIEYELHTIKWFDNQYRD 77 Query: 65 -AVHQGIIARVKPGRQY-QENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG +A + N + I + Q +++LD + DP N G LRS AA V Sbjct: 78 LPNHQGFVAEIDGSSLTISFNQFCEKIKNEQQGIVVVLDQIHDPGNFGGILRSCLAANVL 137 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE-NIWIVGTAGEADHT 181 VI KD +N T K + GA + LI V NL+ ++ LQE+ W + Sbjct: 138 GVIFKKDNQVSINNTVIKTSLGACFYLNLIEVANLSYAIKDLQEKYGFWSYVSNLSDQAQ 197 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMA-GSVSSLNVSVATGICLF 236 Y + L++G E +G+ ++ D I IPM + SLNVSVATGI LF Sbjct: 198 DYNVDYANKSILIVGNEQKGVSSQLIKNADYQIKIPMYTDKIQSLNVSVATGIMLF 253 >UniRef50_O51468 Uncharacterized tRNA/rRNA methyltransferase BB_0516 n=21 Tax=Borrelia RepID=Y516_BORBU Length = 228 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 68/219 (31%), Positives = 119/219 (54%), Gaps = 9/219 (4%) Query: 31 REDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGR----QYQENDLP 86 ++ + + ++Q + I N LD+ H+G ++K + + Q D Sbjct: 7 KKSPKTKEIEQLAKTQNIKIIRINTNELDKILKNKDHRGFALKLKLEKNKNVKTQTKDFE 66 Query: 87 DLIA---SLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVAC 143 +L+ + F+L+LD + DP N GA LR+A+ + VI + RSA+ N+T + + Sbjct: 67 NLLETFKKKENAFILLLDEIEDPQNFGAILRTAEQFSIDLVITTQKRSAKDNSTVLRTSS 126 Query: 144 GAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTG-RLALVMGAEGEGM 202 GA++ V + VTN+ T+ +L+ WI + + + K+ ++AL++G EG+G+ Sbjct: 127 GASQYVKKMTVTNINNTINLLKNYGFWIYTGDIKG-QDINKIKINDKKIALILGNEGKGV 185 Query: 203 RRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +L +E+ D LI IP +G + SLNVSV+TGI +FE RQ Sbjct: 186 HKLIKENSDFLIRIPTSGKIDSLNVSVSTGILIFEIKRQ 224 >UniRef50_A4XKC2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clostridia RepID=A4XKC2_CALS8 Length = 271 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 11/242 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDK---RLLPLIHALESQGVV-IQLANRQYLD 59 ++ G+ AV+ L+ A E + + K I L S + I + + Sbjct: 37 LVEGVKAVKEALDYAIEDINLLIFSQEASKKYEEFFSRCISLLNSGKLKRIVQVPEKIFE 96 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 S QG++A +L ++++D V DP NLG +R ADA Sbjct: 97 HISTTTTPQGVLAECSFFD-------KELDVLKKHNRVVVIDSVQDPGNLGTIIRCADAF 149 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G VI N + A G+ V ++R + L + + T D Sbjct: 150 GFECVITVNGTVDVYNPKVVRSAMGSMFHVDVVRERKKEEVLEALNKRGFALYVTTPYGD 209 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + + + R A+V+G E +G+ E+ + + I M G SLN +VA I L+E Sbjct: 210 VDISKLSVDDRFAIVIGNESKGVDVAFLENATKKVKISMPGKAESLNSAVAAAIVLYELR 269 Query: 240 RQ 241 ++ Sbjct: 270 KK 271 >UniRef50_Q4SFE3 Chromosome 2 SCAF14604, whole genome shotgun sequence. (Fragment) n=5 Tax=Clupeocephala RepID=Q4SFE3_TETNG Length = 364 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 77/255 (30%), Positives = 115/255 (45%), Gaps = 15/255 (5%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKR--LLPLIHALESQGVVIQLANRQYLDE 60 E+++GI L + + ++F+ G +R +L + S+GV I + LD+ Sbjct: 109 EIVFGIAPCLLALSQGRRKAFKLFVKDGEAAERASVLKVCEEAHSRGVQICHVRKNDLDK 168 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDL--IASLDQPFLLILDGVTDPHNLGACLRSADA 118 S G VHQG+ + + S P L+L+ + DP NLGA LRSA Sbjct: 169 MSLGRVHQGVCLQASRLDFLTKTTCNSRGSKDSNRPPLWLVLEEIQDPMNLGAILRSAYF 228 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-E 177 GV V RS L+ K + G E + + +L +RM + +VG+ G E Sbjct: 229 LGVDRVASSVHRSCPLSPVVSKASSGVMEVMEVYGYESLEDMLRMKVAQGWQVVGSVGTE 288 Query: 178 ADHT------LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP----MAGSVSSLNV 227 A+ T +T L+MG EGEG+ R C L+SIP + + SLNV Sbjct: 289 AEATHIPIIRCSDFHLTKPTLLLMGGEGEGLSRGLLSLCQALLSIPAGRNLFPGIESLNV 348 Query: 228 SVATGICLFEAVRQR 242 SVA GI L ++ R Sbjct: 349 SVAAGIILHSMLQSR 363 >UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMU7_9BACT Length = 273 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 102/194 (52%), Gaps = 6/194 (3%) Query: 49 VIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHN 108 + ++ ++ + +G++A +K Q N D + D PFLLI++ + P N Sbjct: 79 TLFELSKHAFEKVAYRDRPEGLLAVIK-----QWNHTLDDLQLSDPPFLLIVEAIEKPGN 133 Query: 109 LGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEEN 168 LG LRSADAAGV AVI + N A + + G S+P + ++ ++ ++++ Sbjct: 134 LGTILRSADAAGVDAVICCDSVTDLFNPNAVRSSTGVLFSMPTVTASS-DEVIKWIRQKG 192 Query: 169 IWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVS 228 I + T D + + G LA+VMG+E G+ CD + IPMAG SLNV+ Sbjct: 193 IRTIATTPHTDILYTDTDLRGPLAIVMGSEQFGLSEKWLSACDTKVLIPMAGQADSLNVA 252 Query: 229 VATGICLFEAVRQR 242 +AT I LFEAVRQR Sbjct: 253 MATLITLFEAVRQR 266 >UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIM1_THEYD Length = 261 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 9/237 (3%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G+H V+ L ++VF+ + +K+ + L+ + + + + + + SD Sbjct: 29 EGVHLVETSLVSDYVFTEKVFVTEKFIEKQ-KNFLEILQEKKIPVIIISEKVAKTISDTV 87 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QG+ A + + NDL + F++I D + DP N+G +R+A+A G AV+ Sbjct: 88 TPQGVFA-IADFKIKNINDLSN------PTFIVIADRIQDPGNIGTIIRAAEAFGAEAVL 140 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 V + A + + G+ +P+I+VT + + + + +V T +A + + Sbjct: 141 VTHGTCNPFSNKALRASAGSIFFLPVIKVT-VKEIEEFVSKYGLNLVITDLKATISSFNM 199 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 T LA+V G E +G+ + R IP G SLNV++A L+E +RQR Sbjct: 200 DFTKPLAIVFGNESKGVSQDLRAIKHTSCKIPHKGKAESLNVAMAATAILYEILRQR 256 >UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitutaceae RepID=B1ZVF9_OPITP Length = 296 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 120/266 (45%), Gaps = 29/266 (10%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +I G ++ LE+ +E++ + LI E+ G + + + + Sbjct: 33 LIEGFREIRRALEK-RVPLRELYYAPEWFLGENEPALIAQAEAAGAQLFELTKSAFAKVA 91 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIAS-------------------------LDQPFL 97 G++A V P + DL ++A PF+ Sbjct: 92 YRERPDGLLA-VAPQWKRTLQDLDKIVAGSGGPGRPGSTTPATTSAVGAGAPDLQRAPFI 150 Query: 98 LILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNL 157 L+++ + P NLG LRSADAAG AVIV + N + + G SVPL+ V Sbjct: 151 LVVEAIEKPGNLGTILRSADAAGCDAVIVCDPVTDIFNPNVVRASTGVLFSVPLV-VAES 209 Query: 158 ARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP 217 A + L+ + + + T A+ + + G LA+VMG+E G+ ++CD + IP Sbjct: 210 APVLAWLRAQGVRTIATTPAAEKLYTDADLRGPLAIVMGSEQYGLSEFWLKNCDLPVRIP 269 Query: 218 MAGSVSSLNVSVATGICLFEAVRQRS 243 MAG SLNV++AT I LFEAVRQR+ Sbjct: 270 MAGQADSLNVAMATIITLFEAVRQRA 295 >UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L451_EXISA Length = 248 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 20/238 (8%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G H V + R ++ + + K L + + D S+ Sbjct: 31 LVEGEHLVDEAIRAG--RLVQLIMAESYSPKGTWRLEDM------PVLELSDHVADLLSE 82 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QG+ A VK +L+LD V DP NLG +R+ADAAG Sbjct: 83 TEKTQGVFAVVKMTP-----------VERKMKKVLVLDRVQDPGNLGTMIRTADAAGFDT 131 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ K NA + G+ V + V +L + L+E+ + GTA + Sbjct: 132 VLLGKGTVDPFNAKVVRATQGSLFHVNVTSV-DLLEKLPELKEDGFHVYGTALSKATSYE 190 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 Q ++ALV+G E +G+ CD + IP+ G V SLN +VA GI ++ Q Sbjct: 191 QVAFEEKVALVIGNEAQGVHADVLALCDTRVHIPVLGDVESLNAAVAAGILMYRIALQ 248 >UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes RepID=C5WEU6_STRDG Length = 245 Score = 206 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 72/237 (30%), Positives = 110/237 (46%), Gaps = 22/237 (9%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S +I G H + +++ + F+ +F+L+ L + Q + L + L E Sbjct: 26 SYLIEGWHLFEEA-QQSGQGFRHIFVLE--------ELAERVADQE-KVVLVSADVLKEL 75 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRSADAAG 120 +D QGIIA V D+P L D Q LIL+ V DP NLG +R+ADAAG Sbjct: 76 TDSPSPQGIIAEV---------DMPQLAFPTDYQGKYLILEDVQDPGNLGTIIRTADAAG 126 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA-D 179 V + + + N+ + G+ +P+ R T++ + R +QE N ++ T Sbjct: 127 FDGVFLSEKSADVYNSKTLRSMQGSHFHLPIWR-TDIYKICREMQEHNTPVLATTLSKVS 185 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 ALVMG EG+G+ D+L+ I M G SLNV+VA GI +F Sbjct: 186 VDYKTVPHQESFALVMGNEGQGISAEMTTLADQLVHITMPGQAESLNVAVAAGILIF 242 >UniRef50_Q6MA83 Putative rRNA methylase n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=Q6MA83_PARUW Length = 265 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 2/204 (0%) Query: 39 LIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLL 98 LI L S+G + + + + S G++A + P R +DL PF + Sbjct: 60 LIERLTSRGTELFYCSEKVFRKISYRDRPDGLLA-IAPQRHLTLDDLSLKTKKPMAPFFV 118 Query: 99 ILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLA 158 + + + P NLG LRS+DA G+ +IV + N + + G +VP + Sbjct: 119 VAEAIEKPGNLGTILRSSDAVGIDGLIVCDRCTDIYNPNVVRASVGTLFTVPTVEAR-GE 177 Query: 159 RTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM 218 + L ++ I I+ A+ Q +T +A+ +G E G+ + + IPM Sbjct: 178 DILLWLNKQGIDILAATPHAEKEFTQVDLTSPVAIAVGTEQLGLSERWMKQATMQVRIPM 237 Query: 219 AGSVSSLNVSVATGICLFEAVRQR 242 G SLNV++AT + L+E +RQR Sbjct: 238 MGVADSLNVAMATTLLLYEVLRQR 261 >UniRef50_D2LHP2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LHP2_RHOVA Length = 310 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 92/241 (38%), Positives = 128/241 (53%), Gaps = 8/241 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E +YG+H+V+A L R + ++ + RL PL+ A + + LA LD + Sbjct: 70 ETLYGLHSVEAALANPKRRIRHAWLTEN-AAARLAPLLDA---RKIAATLALPADLDALT 125 Query: 63 D-GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 GAVHQG + +V+P Q +D D + ++ILD VTDPHN+GA LRSA A G+ Sbjct: 126 GPGAVHQGAVLQVEPLAQPGLDDFLDALGDAP-ATVVILDQVTDPHNVGAVLRSAAAFGI 184 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 A+IV S L A K A G E VP+I V NLAR + L+E + +G E Sbjct: 185 GALIVQDRHSPPLTAALAKSASGGLEHVPVIEVVNLARVLEKLKERDFLCIGFDSEGAQR 244 Query: 182 LYQSKMTG-RLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + G R+A V GAE +G+RRL RE CD + ++ G + SLN+S A I F A Sbjct: 245 FDAALAGGRRVAFVFGAEDKGLRRLVREGCDAIAALSAPGPIKSLNISNAAAIV-FHARA 303 Query: 241 Q 241 Q Sbjct: 304 Q 304 >UniRef50_Q0BV71 23S rRNA Gm2251 methyltransferase n=13 Tax=Acetobacteraceae RepID=Q0BV71_GRABC Length = 441 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 88/238 (36%), Positives = 131/238 (55%), Gaps = 8/238 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++G+HAV+A L R + + + + E L +V + R ++D+ Sbjct: 209 WLHGLHAVEAALRNPARRLRRLLLTEEAEATLAERLP---PPWALVAERTERAHMDQLLG 265 Query: 64 GA-VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 VHQGI + L +++A P +L+LD V+DP N+GA LRSA A Sbjct: 266 TESVHQGIALLAD---KLPSPPLGEILAQRPGP-VLVLDQVSDPRNVGAILRSAAAFQAC 321 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 VIV + + + T K A GA + +P++RV N+ART+ L+ ++W+VG E Sbjct: 322 CVIVQDRNAPEESGTMAKAASGALDRLPMLRVVNIARTLAALKAADLWVVGLDAEGAPLS 381 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + R+ALVMGAEG+G+RRLTRE CDE++S+ MA + SLNVSVAT I L+E R Sbjct: 382 GPALGKRRVALVMGAEGDGLRRLTRESCDEIVSLAMAEGMESLNVSVATAIALYEISR 439 >UniRef50_C1QAT9 rRNA methylase, putative, group 3 n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QAT9_9SPIR Length = 237 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 66/234 (28%), Positives = 118/234 (50%), Gaps = 6/234 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 I +A+ + + + ++I K KR +I E + V+I+ ++ +++ Sbjct: 2 FITSKNAITEAI--SKNLVETLYI-KFPISKREKDIIKLAEKKKVLIKNVDKNEMEKIVG 58 Query: 64 GAVHQGIIARVKPGRQYQ-ENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 I A +K + EN L + D P + ILD +TD HNLGA +R+A G Sbjct: 59 KVYS--IAADIKENAEIGIENFLQKALEKKDNPLIFILDSITDVHNLGAIIRNAYFFGSS 116 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +I+PKD SA +N +++ GAA +P+ TNL RT+ +++++ WI + E + +L Sbjct: 117 GIIIPKDNSAPINEKVYEISAGAAYHLPISIETNLNRTIELMKDKGFWIYYASEEGETSL 176 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 K A+++G E G+R + +++ D I I + SLNVS A+ + + Sbjct: 177 EDFKFNTPTAIILGNEHSGVRDILKKNSDGSIIINKSNDFDSLNVSAASAVIAY 230 >UniRef50_A7IKP0 RNA methyltransferase, TrmH family, group 3 n=13 Tax=Rhizobiales RepID=A7IKP0_XANP2 Length = 288 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 83/242 (34%), Positives = 119/242 (49%), Gaps = 19/242 (7%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQG----VVIQLANRQYLD 59 ++YG H V + RF+ + + IH L +G + ++ +D Sbjct: 56 LLYGWHTVAEAIGNPKRRFRRLRATENA--------IHRLAEEGLTPPIAPEIVRPGDID 107 Query: 60 EKSD-GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 + AVHQG++A V + D+ +L+LD +TDPHN+GA +RSA A Sbjct: 108 KLLGADAVHQGLLAEVDHLPSPRLKDIA------KTDLVLVLDQITDPHNVGAIVRSAAA 161 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 V A++ S K A G E VP VTNLAR + L+E + +VG E Sbjct: 162 FAVSAIVTTARHSPAATGVLAKSASGGLEHVPFCLVTNLARALTELKENGMLVVGLDSEG 221 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 L + M LALV+GAEG+G+R+LTRE CD L I + G++ SLNVS A + L A Sbjct: 222 PADLEDTPMRAPLALVLGAEGKGLRQLTRETCDVLARIDLPGAIKSLNVSNAAALSLGMA 281 Query: 239 VR 240 R Sbjct: 282 RR 283 >UniRef50_B6R0T8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodobacteraceae RepID=B6R0T8_9RHOB Length = 289 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 11/234 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 IYG+H ++A + + ++ + + L L V ++ A+ + +D+ Sbjct: 57 YIYGLHTIEAAFKNPERKRHKLVVTQN----ALRRLEERNLKIDVPVEDASPRDIDKLVG 112 Query: 64 -GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 AVHQG V +Y +L D +L LD VTDPHN+GA LRSA A Sbjct: 113 KDAVHQGAALLVDALPEYGPEELKD------GQLVLALDQVTDPHNVGAILRSAVALNAD 166 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AV+ + + + K A GA + + +R+ N++R + ++++ + E + Sbjct: 167 AVVTTRRHAPEEGPVLAKTASGALDMIKHVRIQNMSRFVEEMRDKGYQAIALDSEGPEAV 226 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + T + LV+G+EG+G+R R+ CD L + M G + SLNVS A + L+ Sbjct: 227 ENTAFTDKTLLVLGSEGKGVREGVRKSCDTLARLDMPGEIKSLNVSNAAILSLY 280 >UniRef50_Q30P99 RNA methyltransferase TrmH, group 3 n=2 Tax=Campylobacterales RepID=Q30P99_SULDN Length = 226 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 12/232 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +IY + ++++ P + +++++ K + K L+ G I+ + Sbjct: 2 LIYAKQPINYIIQKHPTKIKKLYLAKEMDKKEYSQLMKI----GFEIKRIPPDAAGKMCK 57 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 A HQGI+A V E L + L+ F+L+L GVTD N+GA +R+A A GV Sbjct: 58 NASHQGILAEV------DEYVLCNYKTFLNYEFVLVLSGVTDVGNIGAIIRTAYALGVDG 111 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VI +S + A + + GA +P N+ + L+ G + Sbjct: 112 VIACGVKSLPIEAIV-RTSTGALFDMPFAIEQNVLDVLNDLKMSGFTSYGADM-GATDIR 169 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 K+ + AL +G+EGEG+ + DEL+SI M+ SLNVSVA I + Sbjct: 170 DVKIKQKRALFLGSEGEGLTQRVSSKLDELVSIKMSHEFDSLNVSVAGAILM 221 >UniRef50_C0WU39 RNA methyltransferase n=3 Tax=Lactobacillus RepID=C0WU39_LACBU Length = 255 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 14/238 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G H V ++ ++ V + D L + ++ L + S Sbjct: 31 IIEGWHIVDEAIK-HDQQIDAVIVT----DANFLDQLE-VDPAVTDTYLITPEVAKHISA 84 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QG+ A + ++ +P+ + L+LD + DP N+G +R+ADAAG++ Sbjct: 85 TETPQGVFAVLTTENYHE--SIPEKLGGS----WLMLDNIQDPGNIGTMVRTADAAGMNG 138 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADHTL 182 VI K + N + G+ V L +LA M + N+ + GT + + Sbjct: 139 VIFGKGTADIYNPKVVRSMQGSQFHVRLYS-GDLAVWMAAFNKHNVPVYGTELNDQAISY 197 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + T + ALVMG EG G+ + D+ + IPM G SLNV+VATGI +F V+ Sbjct: 198 DDVEPTKQFALVMGNEGNGVSADLLDKTDQNLYIPMNGEAESLNVAVATGILIFHFVK 255 >UniRef50_D1A1M0 tRNA/rRNA methyltransferase (SpoU) n=26 Tax=Actinomycetales RepID=D1A1M0_THECD Length = 289 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 12/243 (4%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G AV+ L + R L+ A E GV + + + + E + Sbjct: 35 EGPQAVREALGLPG--VLTELFTTAEAESRHAELVTAAERAGVPVLRVSGEVMAELAQTV 92 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QG++ + + L D + S + +L V DP N G LR+ADAAG AV+ Sbjct: 93 TPQGLLGVCT----FVDVSLADAL-SPPPTLVTVLAHVRDPGNAGTVLRTADAAGCDAVV 147 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 N + + G+ VP++ T + L+E + ++ G +HTL + Sbjct: 148 FTDASVDPYNGKCVRASAGSLFHVPVVAGTRFETLIGALRECGLTVLAADGAGEHTLDAA 207 Query: 186 ----KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR- 240 + A V G E G+ D ++ +P+ G SLN++ A +CL+ + R Sbjct: 208 LDGGLLDRPTAWVFGNEAWGLPEEILRAVDHVVRVPIYGRAESLNLATAAAVCLYASARA 267 Query: 241 QRS 243 QR+ Sbjct: 268 QRA 270 >UniRef50_UPI00006CAEFD RNA methyltransferase, TrmH family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CAEFD Length = 293 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 57/248 (22%), Positives = 105/248 (42%), Gaps = 19/248 (7%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRED---KRLLPLIHALESQGVVIQLANRQYLD 59 +YG++ L EV I + + ++ +I+ ++ + ++ +R+ LD Sbjct: 36 NFVYGLNPTMIALHSNKRNIVEVIINQHVQSHLPPKISNIINTANAKKIPVKFVDREKLD 95 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 HQ ++ + +P + + L + +L LD +TDP N GA +R+ Sbjct: 96 RLVQNQPHQNVVIKAEPLKYLRTKSSDILQGN----MILFLDRITDPQNFGAIIRTCQYL 151 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 GV V+V + LN T K + GA E + + + ++ Q + T Sbjct: 152 GVDNVVVDEFSRCPLNPTVSKTSSGALEVMDIYCTPDPVEFLKDCQLRGWKVYSTGLNHS 211 Query: 180 HT-LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISI--------PMAGS---VSSLNV 227 + K+ ++ LVMG EG G+ + D+++SI PM + SLNV Sbjct: 212 ENQISLEKLKDKIVLVMGNEGNGVDPKILKVSDKIVSIDQTLYLNRPMVFPYTLIDSLNV 271 Query: 228 SVATGICL 235 + AT I + Sbjct: 272 NSATSILI 279 >UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXH3_9BACT Length = 269 Score = 202 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 78/243 (32%), Positives = 115/243 (47%), Gaps = 13/243 (5%) Query: 4 MIYGIHAVQALL--ERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++ G V+ L+ A + +F + DK I + ++ Sbjct: 35 VVEG---VRELIHCAHAGYEIENLFCCRDILDKNPEAWKLDSLIGQTTIYEVTQAVYEKM 91 Query: 62 SDGAVHQGIIARVK-PGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + +G++A VK R + DLP+ P +++L+ V P NLGA LRSADA+ Sbjct: 92 AYRGSTEGMMAEVKVKNRTLADLDLPE------SPLIVVLESVEKPGNLGAVLRSADASK 145 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 AVIV + N + + GA +VP + ++ A M L+E NI I+ + Sbjct: 146 ADAVIVCNPLTDLFNPNLIRSSIGAIFTVPTVACSSQA-CMNFLKERNIKILTAQLQDSA 204 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 Y S M G A+VMG E G+ R+ D I IPM G + SLNVSV+ I +FEAVR Sbjct: 205 PYYDSDMRGGTAIVMGTESTGLTDAWRKAADAHIRIPMLGQLDSLNVSVSAAILMFEAVR 264 Query: 241 QRS 243 QRS Sbjct: 265 QRS 267 >UniRef50_C9RRQ7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRQ7_FIBSS Length = 415 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 12/236 (5%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G+H V+ L++ E V++++G E++ L+ I+ E + + + S Sbjct: 183 EGVHVVEELVKHHRELVISVYVVEGFENEELIEAINEAE---ITLHTLTEDQMKRLSSTM 239 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QGIIA + + + L ++D V DP NLG R++ +I Sbjct: 240 TTQGIIAYCNIASKKPVYE-------TSRSVLTLVDAVQDPGNLGTLFRTSLGFNSSGMI 292 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 + + + N + + G VP +L + L+ + I+ T A +L + Sbjct: 293 LGRGTVSPFNPKVVRGSSGTFLRVPFEFDVDLVDQINFLRSKGYTIIATDLHAKQSLREI 352 Query: 186 KMTG--RLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 ++A ++G EG G E DE + IPM+ + SLNV+VA GI +EA Sbjct: 353 PAHKLRKMAFLVGNEGAGTNPYFIELADETVKIPMSSELESLNVAVAHGILSYEAA 408 >UniRef50_C0GP39 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GP39_9DELT Length = 240 Score = 202 bits (515), Expect = 9e-51, Method: Composition-based stats. Identities = 75/233 (32%), Positives = 109/233 (46%), Gaps = 3/233 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ G V LE PE V + K + L P+I V +L Q L + Sbjct: 4 NLVLGKKPVMEALEENPEHIDLVLV-KKPVPRGLDPVISRCRQLHVRFKLVPDQELQQM- 61 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 GA QGI AR++ + L + P LL+LD V DP NLG R+ A G Sbjct: 62 -GAARQGIAARLRMQTLVDLDLLLNNTTRAVFPVLLLLDQVQDPGNLGTLARTLAALGGA 120 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +I+P+DRSA L A K + GA + + +VTNLART+ + + I + ++ Sbjct: 121 GIIIPRDRSAPLGPGAMKASAGALNRIGVAQVTNLARTLDHIDQAGFNIYAATMDQGQSV 180 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + LV+G E +G+R + C I IPMAG + SLNV+ A + L Sbjct: 181 LEQTFVFPAVLVLGGEEKGIRPNVLKRCPGKIHIPMAGGMDSLNVAHAGALIL 233 >UniRef50_A1S8M2 Putative tRNA/rRNA methyltransferase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S8M2_SHEAM Length = 333 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 2/239 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 +YGI+A + + + ++++ + + ++ L + + L++ + Sbjct: 97 LYGINACRETFKLRSDEVIKLYLDEETA-PKFADVMKYLARNRKAYHVVDADELEKIAGS 155 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAV 124 H G++ V+ + + LL LDGV +PHNLGA +RS GV + Sbjct: 156 QHHGGVVMVVRRKPVQDIAGYLAANTAKSRDCLLALDGVGNPHNLGAIMRSCAHFGVAGI 215 Query: 125 IVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQ 184 ++ + Q + A + A G E V IR L +++ ++ I+ T+ +LY+ Sbjct: 216 VMTEAGLLQ-SGAAARTAEGGMEHVEGIRCDRLTDALQLCRDAGYSIITTSSHGGESLYR 274 Query: 185 SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 SK+ R+ +V G E +G+ + D + IP G V SLNVSVA + L E RQ+S Sbjct: 275 SKLPARVVVVFGEEMDGVSKAVASRADIGVQIPGTGLVESLNVSVAASLILGEWYRQQS 333 >UniRef50_A9T6G4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6G4_PHYPA Length = 280 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 13/249 (5%) Query: 3 EMIYGIHAVQALLERAPERFQEVFIL----------KGREDKRLLPLIHALESQGVVIQL 52 E +YG+ ++A F +++ K ++ + + +++ + + ++ Sbjct: 19 EAVYGVAPIRAAFLAERRIFHTLYVQTNLVDNIATGKRKDKQAVNWILNRAHNLEMKVET 78 Query: 53 ANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDL-IASLDQPFLLILDGVTDPHNLGA 111 ++Q+L+ D HQG++ P L I P + LD V DP N GA Sbjct: 79 VSKQHLNLLVDNRPHQGLVLDASPLELVPCEYLERPSIQDGRSPVWVALDEVIDPQNFGA 138 Query: 112 CLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWI 171 LRS G V+V SA L+ K + GA E + + N+ + + + Sbjct: 139 ILRSCHYLGATGVVVCAKNSAPLSGVVSKASAGALEVMEIQSCRNMMKFLDTSVQNGWRA 198 Query: 172 VGTAGEA-DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVA 230 VG + E + + + LV+G EG G+R + C EL+SI A +V SLNVSVA Sbjct: 199 VGASSEPRALPIQELEPGLPTILVLGNEGRGLRTNVKRSCTELVSIK-ADAVDSLNVSVA 257 Query: 231 TGICLFEAV 239 GI L + + Sbjct: 258 AGILLHDLL 266 >UniRef50_Q0AY01 23S rRNA methyltransferase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY01_SYNWW Length = 264 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 11/239 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G ++ L+ P+ +++FI + L + +++ + SD Sbjct: 31 LIEGKKMLEEALK-HPKLLRQIFI-EAELASEYTELYQQHPEW--ECYVVDKRLMKHISD 86 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 GI+A + +E L FLL LD + DP NLG +RS A GV Sbjct: 87 TETPPGIVALCQIPSWSREEFLSQ------NAFLLYLDRIADPGNLGTIIRSGWALGVDG 140 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +++ + + + + G ++PL+ ++ ++ L++ + +A ++ Sbjct: 141 ILLSPESVDPFSPKVVRASMGGIFNIPLLLDFSVDE-LKRLKQNAYTFFCASLQARQEIF 199 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 TG L +G+E +G+R + E CD IP+ V SLN +VA I + EA +QR Sbjct: 200 SLDFTGPSLLAIGSESQGVRPVIEEICDFNCKIPIKPGVDSLNAAVACAIIINEAWKQR 258 >UniRef50_A6G5X9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G5X9_9DELT Length = 325 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 81/244 (33%), Positives = 129/244 (52%), Gaps = 13/244 (5%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 + G AV LL +P R + + + +GR + L L + V I+ R+ D+ Sbjct: 78 VPGERAVVELLRASPTRVRRLLLEEGRRFESLEALAAEALGERVTIERVEREIFDDLIGP 137 Query: 65 AVHQGIIARVKPGRQYQENDL----------PDLIASLDQPFLLILDGVTDPHNLGACLR 114 + +G++A +P R++ L + +++LDGV DPHNLGA +R Sbjct: 138 GLARGVLAVTRPPRRWDFEALLEGGPEAEGGEAVRTRRGHRIIVLLDGVQDPHNLGAVIR 197 Query: 115 SADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEEN-IWIVG 173 +A+ G AV+ +DR+A L+A A + + GA E +PL +VTN+AR + + W+VG Sbjct: 198 NAEFFGATAVVWGQDRAAPLSAVAVRSSAGATERLPLGQVTNVARALEQAKASGTWWVVG 257 Query: 174 TAGEADHTLYQS--KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVAT 231 T + +++ + LV+G+E GMRRLTRE CD L++I GS+ SLNVS A Sbjct: 258 TVVDEGTPVHEFAQDPPSDMILVLGSEERGMRRLTRERCDFLVTIARGGSLGSLNVSAAG 317 Query: 232 GICL 235 + L Sbjct: 318 AVAL 321 >UniRef50_Q4A787 TRNA/rRNA methyltransferase n=4 Tax=Mycoplasma RepID=Q4A787_MYCH7 Length = 233 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 66/237 (27%), Positives = 123/237 (51%), Gaps = 16/237 (6%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M + I G +++ ++ F+E+++LK D+ L +++ +R +LD+ Sbjct: 1 MVKYICGRNSLADAIKNG-FIFKEIYLLKPTNDQIFLKQ---------KVKIVSRDFLDK 50 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 HQG + ++ + ++ D + +LILD + D +NLG +R+A+ G Sbjct: 51 LVS-LNHQGFVGVLENFKFFEI----DTLVKDKPKIILILDHIQDQNNLGNIIRTANCFG 105 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EAD 179 + +I+PK R+A+LN T KV+ G + I V ++ + L+E + WI T E Sbjct: 106 IKHIILPKKRAAKLNETTMKVSSGGFVGLKFILVNSIVSAINKLKEMDFWIYATDLKEKS 165 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + + + A+++G E G+++ + D+ IP+ G+V+SLNV+VATGI LF Sbjct: 166 RKIQEIQFNYPCAIILGNEATGIKKSSLNASDQTFFIPLEGTVNSLNVTVATGIILF 222 >UniRef50_A1VHL4 RNA methyltransferase, TrmH family, group 3 n=9 Tax=Desulfovibrionales RepID=A1VHL4_DESVV Length = 274 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 77/230 (33%), Positives = 105/230 (45%), Gaps = 2/230 (0%) Query: 7 GIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAV 66 G+ V LL P R VFI +GR L+ V L Q LD+ G Sbjct: 35 GLKPVLELLASDPARIDTVFIRRGRRTPDTDRLMDLCREMRVRFSLVEGQVLDKLYAGG- 93 Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 HQG++AR+ + +DL P ++ LD V DP N G RS A G +IV Sbjct: 94 HQGVVARLFEAGYVELDDLLRDAPDAPLPLIIALDQVQDPGNAGTLARSLYALGGAGLIV 153 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT-AGEADHTLYQS 185 P+ +A L A A + A GA E +P+ RV NLAR + E I G GE + + Sbjct: 154 PRHNAAYLGAGAHRAAAGALEKLPVARVANLARALDEAAEAGYAIYGAMCGEGSVNAFTA 213 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + LV+G E +G+R + CD L+ IPM S NV+ A + L Sbjct: 214 TLRTPCVLVLGNEDKGIRPNVAKRCDTLLHIPMLRDFDSFNVAQAGALLL 263 >UniRef50_Q1GEY5 RNA methyltransferase TrmH group 3 n=13 Tax=Rhodobacterales RepID=Q1GEY5_SILST Length = 262 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 126/241 (52%), Gaps = 11/241 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLD-EKS 62 ++G+HAV+ L + + ++K L A+ + G+ ++ + + Sbjct: 28 WLFGLHAVRDALLNPKREKLRLVVTLNAQNK----LEDAIATSGITPEVVDPRKFSVPID 83 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 G+VHQG VKP L D + P +++LD VTDPHN+GA LRSA+ G Sbjct: 84 PGSVHQGAALEVKP---LNWGGLEDNCIGAEVPRVILLDRVTDPHNVGAILRSAEVLGAS 140 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AVI + SA K A GA E P +R+ NL+ T+ LQ+ ++G GEA+ T+ Sbjct: 141 AVIGTRHHSAPETGALAKTASGALERQPYLRMRNLSDTIVALQQMGYLVLGLDGEAEETI 200 Query: 183 YQS---KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 ++ + +ALV+GAEG G+R+ T+E D+L+ I A SLNVS A + L+ ++ Sbjct: 201 EEAVAGRTKEPIALVLGAEGPGLRQKTKETVDKLVKIDAARGFGSLNVSNAAALSLYASL 260 Query: 240 R 240 + Sbjct: 261 K 261 >UniRef50_C1EER3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EER3_9CHLO Length = 513 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 74/278 (26%), Positives = 114/278 (41%), Gaps = 44/278 (15%) Query: 3 EMIYGIHAVQALLERAPER-FQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E ++G + V A+L V+I +G + R L+ A++++G+ + A++ L+ Sbjct: 226 EAVFGRNPVLAMLAARRREEISAVWIQEGSDASRDRALLKAVQARGITPEYASKHDLNML 285 Query: 62 SDG---AVHQGIIARVKPGRQYQENDLP--------------------DLIASLDQPFLL 98 G H G++A P + LP + D P L Sbjct: 286 VGGDGRRPHNGVVADASPLTPTPIDSLPLPAEWATDRAGDGSGSSVDDNQSRPSDPPVWL 345 Query: 99 ILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLA 158 LD + DP NLGA LRSA GV V+V SA L+ K + GA E + + V + Sbjct: 346 ALDEIVDPQNLGAMLRSAHFLGVAGVVVCAKNSAPLSPVVSKASSGALERMDVRSVGVMP 405 Query: 159 RTMRMLQEENIWIVGTAGEAD-HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISI- 216 R ++ EE + G D + + +V+G EG G+R R C+ ++ I Sbjct: 406 RFLQRCVEEGWDVFGADNAPDAEDVTAVSVARPSVVVVGNEGAGLRTNVRRACNRVVRIE 465 Query: 217 ------------------PMAGSVSSLNVSVATGICLF 236 +V SLNVSVATGI L Sbjct: 466 GGGGAERGVGEAGVGEGSEGGDTVDSLNVSVATGILLH 503 >UniRef50_Q6FPX7 Strain CBS138 chromosome I complete sequence n=1 Tax=Candida glabrata RepID=Q6FPX7_CANGA Length = 384 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 70/276 (25%), Positives = 115/276 (41%), Gaps = 41/276 (14%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLP--LIHALESQGVVIQLANRQYL 58 +SE +YG++ + A LE + + DK ++ + +G+ I A++ L Sbjct: 105 LSEYLYGVNPILAALESDRRGYFTRLLHHDTNDKDSNKLTILRLCKEKGIKIDTADKHQL 164 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLI--------------------------ASL 92 + + AVH ++ KP + N L ++ Sbjct: 165 NLITKSAVHNNMVLECKPLSIPEINSLQNVNIDTASFNVLQTDGITQWSKSEKFHNNERK 224 Query: 93 DQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLI 152 P + LD VTDPHN+GA +RSA G V + + A + K + GA + +P+ Sbjct: 225 KYPVGIYLDEVTDPHNMGAIIRSAFFLGADFVALSRKNCAAIGPVVAKTSSGAVDYLPMF 284 Query: 153 RVTNLARTMRMLQEENIWIVGTAGEADH----------TLYQSKMTGRLALVMGAEGEGM 202 V + + Q E +V ++ L+ + + LVMG E G+ Sbjct: 285 YVDKPLKFFELSQAEGWTVVSSSHGHSKKDVAKTLDLGDLHNMSHSMPILLVMGNEYSGI 344 Query: 203 RRLTREHCDELISIP-MAGS--VSSLNVSVATGICL 235 R ++ D L++IP M + V SLNVSVATGI L Sbjct: 345 RTNLKQRSDFLVAIPQMTNNSTVDSLNVSVATGILL 380 >UniRef50_C4XN87 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XN87_DESMR Length = 237 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 72/225 (32%), Positives = 118/225 (52%), Gaps = 2/225 (0%) Query: 12 QALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGII 71 + L+E++P+ +V + +G + ++ A E+ GV + +D G HQG++ Sbjct: 2 RELVEQSPKSVDDVLLRQGLRGADVDAIVRACEAAGVRYRFMPGLDMDRLYPG-NHQGVM 60 Query: 72 ARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRS 131 AR+ G D+ +L+LD V DP N+GA +R+ A G ++VPK Sbjct: 61 ARLAAGPLVSLEDVLAAGLDAPLQVILVLDRVQDPGNVGALVRTLYALGGGGILVPKHEG 120 Query: 132 AQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD-HTLYQSKMTGR 190 A+L A K + G +PL +VTNL++ + +E ++G AGE + ++ +K Sbjct: 121 ARLGPGAAKASAGTLARLPLAKVTNLSQALDAAKEAGYTVIGAAGEEEAQNVHLAKPPFP 180 Query: 191 LALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 LALV+G+E EG+R R+ CD L IP A + SLNV+ A I + Sbjct: 181 LALVLGSEEEGIRPGIRKRCDALWRIPQARPIDSLNVAQAGAIMM 225 >UniRef50_A9M5R9 RNA methyltransferase, TrmH family, group 3 n=39 Tax=Alphaproteobacteria RepID=A9M5R9_BRUC2 Length = 286 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 77/237 (32%), Positives = 120/237 (50%), Gaps = 10/237 (4%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 +YG+H V+A +E + ++ + I +S +++ + + +D+++ Sbjct: 54 LYGLHTVRAAVENPQRKILR---MRATRNGFARLEIGEADSLPFPVEIVDPRDIDKETGS 110 Query: 65 -AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 AVHQG++ +P R + ++L + P LL+LD VTDPHN+GA +RSA A G A Sbjct: 111 EAVHQGVMIEAEPLRTRKLSEL------RESPLLLVLDQVTDPHNVGAIMRSAVAFGAGA 164 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I S Q K A GA E + I V NLA + L +G + + Sbjct: 165 LITTSRHSPQETGVLAKAASGALELIAHIEVRNLAEAIEELHTLGFQTIGLDSQGPLEME 224 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + R+ALV+GAEG+G+R+ TRE L + M G + SLNVS A I L+ A R Sbjct: 225 ATLSGNRIALVLGAEGKGLRQKTRETVTALARLDMPGEIKSLNVSNAAAISLYAAER 281 >UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepID=C0X8M7_ENTFA Length = 258 Score = 199 bits (508), Expect = 5e-50, Method: Composition-based stats. Identities = 57/234 (24%), Positives = 110/234 (47%), Gaps = 13/234 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G H V+ ++ + +F +G+++ E + + + + L+ S+ Sbjct: 31 IIEGFHLVEEAVKANADVQWILFNQRGQQEWGT----WLAEQETEKLIFVSDEVLNSLSE 86 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI+A V Q +++ + L+LD + DP N+G +R+ADAAG+ Sbjct: 87 LPTSQGILAIVTLETQQEQS-------LSFKGGWLLLDNIQDPGNVGTMIRTADAAGLAG 139 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADHTL 182 VI+ K + N + G+ +P+++ L ++ +++ + + GT EA Sbjct: 140 VILGKGTADIYNTKVLRSMQGSHYHLPVLQ-RELTEVVQAFKKQGLPVFGTELNEAAIAY 198 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 Y+ + AL++G EG G+ + + IPM G SLNV++A G+ +F Sbjct: 199 YEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMKGQAESLNVAIAAGVLMF 252 >UniRef50_C4Q227 rRNA methylase, putative n=1 Tax=Schistosoma mansoni RepID=C4Q227_SCHMA Length = 338 Score = 199 bits (507), Expect = 6e-50, Method: Composition-based stats. Identities = 74/293 (25%), Positives = 108/293 (36%), Gaps = 56/293 (19%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFI---LKGREDKR------LLPLIHALESQGVVIQL 52 SE++YGIH V L +++ L +D + G+ + Sbjct: 26 SELLYGIHPVLCALTFRHRDIYRLYVKDTLSNCKDPDNLVEISTFQITEKALKYGIPVTR 85 Query: 53 ANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLP---------------DLIASLDQPFL 97 + L E S+ HQG+I V P +DL +P + Sbjct: 86 VPVEKLKELSNSRAHQGVILEVSPTTIQSISDLSIKNLLFSWNNLSGNLPYAKKYHRPTV 145 Query: 98 LILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNL 157 L+LD + D N G LRSA G+ AVI+ + K++ GA ES+ R+T+ Sbjct: 146 LLLDHMMDTMNFGNILRSAAFFGISAVILSTSPCVSPSPLISKISVGAMESILFYRLTDT 205 Query: 158 ARTMRMLQEENIWIVGTAGEADHTLYQSK--------------------MTGRLALVMGA 197 M+ L IVGT GE+ + L L +G+ Sbjct: 206 VMDMKSLSNAGFLIVGTCGESQLPSSKVSKSTDLLKPDEVGANNDNTGVYPRPLILALGS 265 Query: 198 EGEGMRRLTREHCDELISIPMAGSV------------SSLNVSVATGICLFEA 238 E G+ CD L+ IP G SSLNVSVA GI L++ Sbjct: 266 ESRGLSENVLNSCDLLLRIPGYGDSTKLNQCISQTIPSSLNVSVAAGILLYQL 318 >UniRef50_O30272 Uncharacterized tRNA/rRNA methyltransferase AF_2399 n=2 Tax=Archaeoglobaceae RepID=Y2399_ARCFU Length = 224 Score = 199 bits (507), Expect = 7e-50, Method: Composition-based stats. Identities = 61/235 (25%), Positives = 110/235 (46%), Gaps = 17/235 (7%) Query: 8 IHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVH 67 +++++ L + ++ G + ++ ++ +GV I + + Sbjct: 6 VNSIKEALLEG--KVVRIY-HSGERNPKISEILEIARKKGVPIYRKDGERFS-------- 54 Query: 68 QGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVP 127 A V P + Y + + A F+L LD V D N+GAC+R+A+ G V++P Sbjct: 55 ----AEVSPIK-YADFEFIVKKALTGGSFILFLDNVVDQRNIGACIRTAEFFGAAGVVLP 109 Query: 128 KDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKM 187 K R + A K + GA +P+ RV N A ++ L++ + + + L + Sbjct: 110 KRRVGSIQEGAVKASAGAVFHIPIARVENFASAIKKLKKLGFTTLAADLDGE-DLEAVSL 168 Query: 188 TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 A+V+G E G+ R ++ CD ++ IP G V+SLN+SVA GI L+ RQ+ Sbjct: 169 LLPAAVVIGGEDRGVSRPVKKQCDFVVKIPGVGKVNSLNLSVAAGIFLYTLSRQK 223 >UniRef50_A1CIR5 RNA methyltransferase, TrmH family family n=5 Tax=Trichocomaceae RepID=A1CIR5_ASPCL Length = 495 Score = 199 bits (507), Expect = 8e-50, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 109/296 (36%), Gaps = 62/296 (20%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDK---RLLPLIHALESQGVVIQLANRQY- 57 S+ +YG AV+A L + ++I +G D+ L S+ + +++A + Sbjct: 181 SQFLYGTSAVEAALRCGRRQMYRLYIYQGDTDELGSNRSKLRKLALSKNIKVKMAYAGWD 240 Query: 58 --LDEKSDGAVHQGIIARVKPGRQYQENDLPDLIA------------------------- 90 D+ S G H G I P L + + Sbjct: 241 RLFDQMSSGRPHNGCILDASPLPVLPIKSLCAVPSLDVNEFRVTLAAQSREEALVNSTND 300 Query: 91 ---------SLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKV 141 P +++LDG+ D NLG +RSA G+ A++ A L+ K Sbjct: 301 RIEIRHPPNRRRYPVIILLDGIVDKGNLGGIIRSAYYLGIDAIVFAGRNCAPLSPVTIKA 360 Query: 142 ACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE--ADHTLYQSKMT--------GRL 191 + GAAE++P+++VTN ++ + L M Sbjct: 361 SAGAAENMPMLKVTNEVDFIQQSKANGWQFYAADAPVLGATYLDNFDMAMTRNPLTQAPS 420 Query: 192 ALVMGAEGEGMRRLTREHCDELISIPMAG------------SVSSLNVSVATGICL 235 L++G+EG G+ + D ++SIP A V SLNVSVA I + Sbjct: 421 VLMLGSEGFGLSPHIKSQADSIVSIPGARAPTEWGTDSDPARVDSLNVSVAAAILM 476 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransfera... 301 1e-80 UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 297 2e-79 UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35... 297 2e-79 UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14... 295 9e-79 UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 ... 292 6e-78 UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 ... 291 1e-77 UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acid... 291 1e-77 UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 ... 291 2e-77 UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiale... 289 6e-77 UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 288 1e-76 UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepI... 288 1e-76 UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51... 288 1e-76 UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0... 288 1e-76 UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lacto... 288 1e-76 UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 287 3e-76 UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=... 286 3e-76 UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 ... 286 5e-76 UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteri... 286 6e-76 UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 ... 286 6e-76 UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter ... 286 7e-76 UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase... 286 7e-76 UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 284 2e-75 UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 ... 284 2e-75 UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase... 284 2e-75 UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli Re... 284 3e-75 UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 ... 283 3e-75 UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 ... 283 4e-75 UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 ... 282 5e-75 UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 ... 282 6e-75 UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 ... 282 6e-75 UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase... 282 8e-75 UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipe... 281 1e-74 UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Helio... 281 2e-74 UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 ... 280 3e-74 UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 ... 280 3e-74 UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntro... 279 4e-74 UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 277 1e-73 UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyan... 276 4e-73 UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase... 276 4e-73 UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Delt... 276 7e-73 UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 275 8e-73 UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bac... 275 9e-73 UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 ... 275 9e-73 UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desu... 275 9e-73 UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 ... 275 1e-72 UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 ... 274 2e-72 UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 ... 273 3e-72 UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 ... 273 3e-72 UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Therm... 272 6e-72 UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostri... 272 6e-72 UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 ... 272 9e-72 UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21... 272 9e-72 UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desul... 271 1e-71 UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 271 1e-71 UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12... 271 1e-71 UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, put... 270 3e-71 UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 ... 270 3e-71 UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas ... 270 4e-71 UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltra... 269 5e-71 UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 ... 269 5e-71 UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 ... 269 7e-71 UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 ... 269 7e-71 UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 269 8e-71 UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thio... 268 1e-70 UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 ... 268 1e-70 UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 ... 267 3e-70 UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerof... 266 4e-70 UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A... 266 5e-70 UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 ... 265 6e-70 UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 265 8e-70 UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine... 265 8e-70 UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 ... 265 8e-70 UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidet... 265 9e-70 UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 ... 265 1e-69 UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus... 264 2e-69 UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Dein... 264 2e-69 UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlm... 264 2e-69 UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 ... 264 3e-69 UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteri... 263 3e-69 UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H... 263 3e-69 UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 ... 263 4e-69 UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococ... 262 5e-69 UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bac... 262 6e-69 UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 ... 262 7e-69 UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae Re... 261 1e-68 UniRef50_C0QBT7 RNA methyltransferase (TrmH family protein, grou... 261 2e-68 UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sph... 261 2e-68 UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotro... 260 2e-68 UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 260 3e-68 UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 ... 259 4e-68 UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 ... 259 5e-68 UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fra... 258 1e-67 UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clost... 258 1e-67 UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 ... 258 1e-67 UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 ... 258 1e-67 UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 ... 258 1e-67 UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Te... 258 1e-67 UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostri... 258 2e-67 UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethio... 258 2e-67 UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubac... 257 3e-67 UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 ... 256 4e-67 UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1... 256 4e-67 UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 256 4e-67 UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 ... 255 6e-67 UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clos... 255 8e-67 UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acida... 255 8e-67 UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clost... 255 8e-67 UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacter... 254 2e-66 UniRef50_B8FZK3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Desul... 254 2e-66 UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 ... 254 3e-66 UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax... 254 3e-66 UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella... 253 3e-66 UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 ... 253 4e-66 UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibaci... 253 5e-66 UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium... 253 5e-66 UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase Rlm... 252 5e-66 UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 ... 252 6e-66 UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 ... 252 8e-66 UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Crypto... 252 9e-66 UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacil... 251 1e-65 UniRef50_Q8D323 YjfH protein n=1 Tax=Wigglesworthia glossinidia ... 250 2e-65 UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminoc... 249 4e-65 UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 ... 249 5e-65 UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacteriu... 249 5e-65 UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Ta... 249 8e-65 UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales... 248 1e-64 UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candida... 248 1e-64 UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clost... 248 1e-64 UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 ... 248 1e-64 UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis ... 247 2e-64 UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Ta... 247 2e-64 UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 ... 247 2e-64 UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=D... 247 2e-64 UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 ... 247 2e-64 UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clost... 247 4e-64 UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacter... 246 4e-64 UniRef50_A5D0U2 rRNA methylases n=2 Tax=Peptococcaceae RepID=A5D... 246 4e-64 UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 ... 246 5e-64 UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Ta... 246 6e-64 UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 ... 245 6e-64 UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacte... 245 7e-64 UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victi... 245 8e-64 UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 245 9e-64 UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachl... 245 1e-63 UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 ... 245 1e-63 UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collins... 245 1e-63 UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 ... 244 2e-63 UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Ato... 244 2e-63 UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 ... 243 4e-63 UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostri... 243 4e-63 UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exigu... 243 5e-63 UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1... 243 5e-63 UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces ... 242 6e-63 UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candi... 242 6e-63 UniRef50_D1I377 Whole genome shotgun sequence of line PN40024, s... 242 8e-63 UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 ... 242 9e-63 UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=M... 242 9e-63 UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Ther... 242 1e-62 UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 ... 241 2e-62 UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 ... 240 2e-62 UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacter... 240 2e-62 UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID... 240 4e-62 UniRef50_Q5GSE7 RRNA methylases n=12 Tax=Rickettsiales RepID=Q5G... 239 4e-62 UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomyceta... 239 6e-62 UniRef50_Q0AY01 23S rRNA methyltransferase n=1 Tax=Syntrophomona... 238 1e-61 UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halot... 238 1e-61 UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma R... 237 2e-61 UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 ... 237 3e-61 UniRef50_B4W2Z7 RNA methyltransferase, TrmH family, group 3 n=1 ... 237 3e-61 UniRef50_C0WU39 RNA methyltransferase n=3 Tax=Lactobacillus RepI... 237 4e-61 UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale... 236 4e-61 UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group... 236 5e-61 UniRef50_A8LF93 RNA methyltransferase, TrmH family, group 3 n=16... 236 5e-61 UniRef50_A4XKC2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clost... 236 6e-61 UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 ... 235 7e-61 UniRef50_D1B9Y1 RNA methyltransferase, TrmH family, group 3 n=1 ... 235 1e-60 UniRef50_A9GVZ1 tRNA/rRNA methyltransferase n=1 Tax=Sorangium ce... 235 1e-60 UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 ... 234 2e-60 UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14... 234 2e-60 UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=... 234 2e-60 UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Therm... 234 2e-60 UniRef50_Q6MA83 Putative rRNA methylase n=2 Tax=Chlamydiae/Verru... 232 6e-60 UniRef50_C4V3B4 TrmH family rRNA methyltransferase n=2 Tax=Selen... 232 6e-60 UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15... 232 1e-59 UniRef50_C9KPX8 RNA methyltransferase, TrmH family n=1 Tax=Mitsu... 232 1e-59 UniRef50_A1KPR5 Uncharacterized tRNA/rRNA methyltransferase BCG_... 231 1e-59 UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes Re... 231 2e-59 UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitu... 231 2e-59 UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 ... 231 2e-59 UniRef50_B9ILU6 Predicted protein n=1 Tax=Populus trichocarpa Re... 230 2e-59 UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepI... 230 3e-59 UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verru... 230 3e-59 UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granul... 230 4e-59 UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA... 230 5e-59 UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 ... 229 5e-59 UniRef50_C6BUS0 RNA methyltransferase, TrmH family, group 3 n=2 ... 229 9e-59 UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 ... 228 1e-58 UniRef50_Q1MSB5 RRNA methylases n=1 Tax=Lawsonia intracellularis... 228 1e-58 UniRef50_B5YER6 23S rRNA methyltransferase n=1 Tax=Dictyoglomus ... 228 1e-58 UniRef50_Q5WEJ4 23S rRNA methyltransferase n=2 Tax=Bacilli RepID... 227 2e-58 UniRef50_A7HWP6 RNA methyltransferase, TrmH family, group 3 n=1 ... 227 2e-58 UniRef50_A8F2F0 tRNA/rRNA methyltransferase n=16 Tax=cellular or... 227 2e-58 UniRef50_Q04SA9 TRNA (Guanosine-2'-O-)-methyltransferase n=4 Tax... 227 3e-58 UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales... 227 4e-58 UniRef50_D1A1M0 tRNA/rRNA methyltransferase (SpoU) n=26 Tax=Acti... 226 5e-58 UniRef50_D1BMG9 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Veill... 226 5e-58 UniRef50_B2GD96 rRNA methylase n=26 Tax=Bacilli RepID=B2GD96_LACF3 226 5e-58 UniRef50_Q5FFT7 Hypothetical tRNA/rRNA methyltransferase n=4 Tax... 226 6e-58 UniRef50_Q04FE0 rRNA methylase n=2 Tax=Oenococcus oeni RepID=Q04... 226 7e-58 UniRef50_C9A4E5 RNA methyltransferase n=3 Tax=Enterococcus casse... 225 7e-58 UniRef50_B8E0E0 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Dicty... 225 7e-58 UniRef50_B8H4C5 23S rRNA Gm2251 methyltransferase n=3 Tax=Caulob... 225 8e-58 UniRef50_C5XJ83 Putative uncharacterized protein Sb03g034180 n=2... 225 8e-58 UniRef50_Q6IN84 rRNA methyltransferase 1, mitochondrial n=14 Tax... 225 9e-58 UniRef50_A4S7U0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 225 9e-58 UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=... 225 1e-57 UniRef50_Q038C4 rRNA methylase n=8 Tax=Lactobacillus RepID=Q038C... 224 2e-57 UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chlor... 224 2e-57 UniRef50_A6Q869 RNA methyltransferase, TrmA family n=7 Tax=Prote... 224 2e-57 UniRef50_UPI000196B15F hypothetical protein CATMIT_01248 n=1 Tax... 224 2e-57 UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bactero... 224 2e-57 UniRef50_A8DJH5 TsnR n=1 Tax=Candidatus Chloracidobacterium ther... 224 3e-57 UniRef50_B2A5N7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Natra... 222 8e-57 UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alph... 222 1e-56 UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planct... 222 1e-56 UniRef50_A7VXH5 Putative uncharacterized protein n=1 Tax=Clostri... 222 1e-56 UniRef50_Q8DNE3 Possible rRNA/tRNA methylase n=69 Tax=Streptococ... 222 1e-56 UniRef50_C9LL58 RNA methyltransferase, TrmH family n=1 Tax=Diali... 222 1e-56 UniRef50_Q6UCQ6 Predicted tRNA/rRNA methyltransferase n=2 Tax=Ba... 221 2e-56 UniRef50_Q5JKV8 Putative tRNA/rRNA methyltransferase n=2 Tax=Ory... 221 2e-56 UniRef50_C9RRQ7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibro... 221 2e-56 UniRef50_A5US41 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chlor... 221 2e-56 UniRef50_D2MNZ0 RNA methyltransferase, TrmH family n=1 Tax=Bulle... 221 2e-56 UniRef50_B9E768 rRNA methyltransferase homolog n=1 Tax=Macrococc... 221 2e-56 UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma a... 221 2e-56 UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis... 221 2e-56 UniRef50_B9KZB6 Possible 23S rRNA methyltransferase tsnR n=1 Tax... 220 2e-56 UniRef50_C5NX63 Putative tRNA/rRNA methyltransferase n=1 Tax=Gem... 220 3e-56 UniRef50_C6NZV4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Sider... 220 3e-56 UniRef50_B2IK44 RNA methyltransferase, TrmH family, group 3 n=2 ... 220 3e-56 UniRef50_D2R0C4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Pirel... 220 4e-56 UniRef50_UPI0000ECA455 rRNA methyltransferase 1, mitochondrial p... 219 5e-56 UniRef50_Q6AGD8 RRNA methyltransferase n=2 Tax=Actinobacteria (c... 219 5e-56 UniRef50_C6HZU7 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Lepto... 219 5e-56 UniRef50_Q1G9C5 TRNA/rRNA methyltransferase n=28 Tax=Lactobacill... 219 6e-56 UniRef50_Q03G93 rRNA methylase n=1 Tax=Pediococcus pentosaceus A... 219 6e-56 UniRef50_Q2RQU5 RNA methyltransferase TrmH, group 3 n=3 Tax=Rhod... 218 1e-55 UniRef50_C1QAT9 rRNA methylase, putative, group 3 n=1 Tax=Brachy... 218 1e-55 UniRef50_D1C2Y8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Sphae... 218 1e-55 UniRef50_A9B181 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Chlor... 218 2e-55 Sequences not found previously or not previously below threshold: >UniRef50_Q0AUG1 Conserved hypothetical tRNA/rRNA methyltransferase yacO n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AUG1_SYNWW Length = 248 Score = 301 bits (773), Expect = 1e-80, Method: Composition-based stats. Identities = 91/244 (37%), Positives = 150/244 (61%), Gaps = 4/244 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M E+++GI+AV L+ R +++ + R+DKRL ++ + + +Q ++ +DE Sbjct: 1 MKELVFGINAVSEALK-GQRRVYKIYAQRERQDKRLEEILTLAREKQLKLQYLEKKKMDE 59 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIA--SLDQPFLLILDGVTDPHNLGACLRSADA 118 +G HQGIIA V+ + + + PFLL+LDG+ DP NLGA +R+A+ Sbjct: 60 LCEGK-HQGIIAEVERYPYADLGQVLEKLQAQKEKPPFLLLLDGIEDPQNLGAIIRTAEC 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AGV +I+P +SA++N T +V+ GA E + +IR NL T++ L++E W++G +A Sbjct: 119 AGVDGIIIPSHKSAEVNPTVSRVSAGAVEHMAIIRENNLVNTIKYLKQEGFWVLGADAKA 178 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + + + + ALV+G EG+G+RRL RE+CD L+ IPM G ++SLN SVA + ++E Sbjct: 179 RQSYFNTSIPSPTALVIGGEGQGIRRLVRENCDILVRIPMFGQLNSLNASVAAALLIYEV 238 Query: 239 VRQR 242 +RQR Sbjct: 239 LRQR 242 >UniRef50_Q7MH13 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=32 Tax=Proteobacteria RepID=RLMB_VIBVY Length = 247 Score = 297 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 171/241 (70%), Positives = 205/241 (85%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +E IYGIHAV+A+L++ PERF E ++LKGR+D RL+P+++ L+ GV +Q R+ LD+K Sbjct: 3 NEFIYGIHAVRAVLDKEPERFIEAYVLKGRQDDRLMPILNELQMVGVSLQQMTRKTLDDK 62 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + GA HQGIIARVKP +Q ENDL D++A P LLILDGVTDPHNLGACLR+ADAAGV Sbjct: 63 AHGANHQGIIARVKPAKQLNENDLDDILAKHASPLLLILDGVTDPHNLGACLRNADAAGV 122 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AVIVPKD+SA + AT KVACGAAE+VPL+RVTNLARTMR LQE+ IWIVGTAGEA H Sbjct: 123 AAVIVPKDKSAPMTATVSKVACGAAETVPLVRVTNLARTMRHLQEQGIWIVGTAGEATHD 182 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +YQ+K+TG LA+VMGAEG+GMRRLTRE CD+LI IPMAG+VSSLNVSVA+GICLFEAVRQ Sbjct: 183 IYQAKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGAVSSLNVSVASGICLFEAVRQ 242 Query: 242 R 242 R Sbjct: 243 R 243 >UniRef50_A6LPP3 RNA methyltransferase, TrmH family, group 3 n=35 Tax=Firmicutes RepID=A6LPP3_CLOB8 Length = 300 Score = 297 bits (762), Expect = 2e-79, Method: Composition-based stats. Identities = 90/242 (37%), Positives = 145/242 (59%), Gaps = 2/242 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +++ G +AV L + ++I + + + ++ + ++I+ +++ LD Sbjct: 58 EDIVIGRNAVIEALR-GERTIEALYISNSKLEGSIKTIVGLAKENKILIKEVDKRKLDSM 116 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSADAAG 120 G VHQG+IA+V P + + +D+ DL + PF++ILD V DPHNLG+ +R+A+ G Sbjct: 117 CGGEVHQGVIAKVTPYKYSEVSDILDLAEKRGEAPFIVILDEVEDPHNLGSIVRTAELFG 176 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VH +I+PK RSA ++ T K + GA E V + +VTNL T+ L+E+ IWI G A+ Sbjct: 177 VHGIILPKRRSASVSTTVYKSSVGAIEHVKIAKVTNLNSTIEELKEKGIWIYGADIRAEE 236 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 YQ G A+++G EG G+ +LT E CD+LI IPM G ++SLN SVA GI ++E ++ Sbjct: 237 YSYQVDFGGPCAVIIGNEGRGISKLTVEKCDKLIKIPMVGKINSLNASVAGGIIMYEVLK 296 Query: 241 QR 242 R Sbjct: 297 GR 298 >UniRef50_A3DH38 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Firmicutes RepID=A3DH38_CLOTH Length = 277 Score = 295 bits (756), Expect = 9e-79, Method: Composition-based stats. Identities = 93/240 (38%), Positives = 150/240 (62%), Gaps = 2/240 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I G ++V ++ ++ + KG ++ + +I +G+V+Q +R LD+ S Sbjct: 38 IEGRNSVLEAIKAG-RTINKILVPKGEKEGSIRQIIALARERGIVVQETDRSNLDKISTT 96 Query: 65 AVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQG+IA V + +D+ + + P+++ILDG+TD +NLG+ LR+ADA G H Sbjct: 97 HAHQGVIAYVAFKDYVEVDDILKIAQDKGEDPYIIILDGITDAYNLGSILRTADAVGAHG 156 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++PK R+ LNA K + GA E VP+ RVTN+++T+ L+++NIWIVGT + + Sbjct: 157 VVIPKRRAIGLNAAVSKASAGAIEYVPVARVTNISQTIEYLKKKNIWIVGTDLSGEKPFF 216 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 ++ + G +ALV+G+EGEGM RL E CD +++IPM G +SSLN +VA I ++E RQR+ Sbjct: 217 EADLKGPVALVIGSEGEGMGRLVSEKCDFIVNIPMQGKISSLNAAVAAAIIMYEIRRQRN 276 >UniRef50_A0L4P9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L4P9_MAGSM Length = 246 Score = 292 bits (750), Expect = 6e-78, Method: Composition-based stats. Identities = 129/246 (52%), Positives = 165/246 (67%), Gaps = 4/246 (1%) Query: 1 MSE--MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 MS+ I+G++ VQALLE +++LKGR KR+ +I ++GV IQ R + Sbjct: 1 MSDETKIHGVNPVQALLESG-RPVSSLWVLKGRHGKRVEEMIEGFRARGVPIQFCERTAM 59 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 D +DG HQG+IAR P +DL D++ QP L+ILDGV DPHNLGA +RSA+A Sbjct: 60 DRMADGGAHQGVIARCAPREAMSWDDLLDVVEKAKQPLLVILDGVEDPHNLGAIMRSAEA 119 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G AVI+PKDR+A LNA A K + GAAE + LIRVTNLAR + LQ+ N+W++G AGEA Sbjct: 120 FGALAVILPKDRTAPLNAGAIKASAGAAERLDLIRVTNLARAIEQLQQRNVWVIGLAGEA 179 Query: 179 DHTL-YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 L G LALVMG EG G+RRLTRE CD+L +IPM G V SLNVSVATG+ L+E Sbjct: 180 GAPLIGTLDCKGPLALVMGNEGSGLRRLTRERCDQLAAIPMGGGVGSLNVSVATGVALYE 239 Query: 238 AVRQRS 243 +RQR+ Sbjct: 240 VLRQRA 245 >UniRef50_Q2JI19 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Synechococcus RepID=Q2JI19_SYNJB Length = 378 Score = 291 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 95/243 (39%), Positives = 142/243 (58%), Gaps = 1/243 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E+IYG V A L+ + + K R + L L+ +++G VI + + L+ Sbjct: 105 QEIIYGRQTVLAALKSQATLNRVWILPKLRYSPQFLSLLEEAKARGTVIDEVSPKRLNAL 164 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + GA HQGI A+ P + DL + + P L++LDG+ DPHNLGA RS +A G Sbjct: 165 TAGANHQGIAAQATPYQYVALEDLVERSRQAGPNPVLVVLDGIQDPHNLGAIARSVEAFG 224 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 + +++P+ R+A + +T KVA GA ++P+ RV NL R + L+E+ W+ GT Sbjct: 225 MQGMVIPQRRAAGVTSTVMKVAAGALSTLPVARVVNLNRALEYLKEQGFWVYGTTSRGAD 284 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +Y + +ALV+G+EGEG+ LT+ HCD+L+SIP+AG SLN SVA GI L+E R Sbjct: 285 PIYSADFQRPIALVVGSEGEGISLLTQRHCDQLLSIPLAGRTESLNASVAAGIALYEIHR 344 Query: 241 QRS 243 QRS Sbjct: 345 QRS 347 >UniRef50_Q1ISZ4 RNA methyltransferase TrmH, group 3 n=2 Tax=Acidobacteria RepID=Q1ISZ4_ACIBL Length = 261 Score = 291 bits (746), Expect = 1e-77, Method: Composition-based stats. Identities = 100/241 (41%), Positives = 145/241 (60%), Gaps = 2/241 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++IYGIH V L+ FQ V I K R D R+ ++ G+ ++ R +LD + Sbjct: 2 DVIYGIHPVSEALKSRGRSFQYVAIAKDRMDPRVQRIVEDARESGITVRFLPRDFLDRTA 61 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 + +HQG+IA +D+ + + F+++LDG+ DPHNLGA +RSAD AGV Sbjct: 62 NTNMHQGVIAVTSKKEYLDLDDIIEK-KRGEHAFVVVLDGIEDPHNLGALIRSADGAGVD 120 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE-NIWIVGTAGEADHT 181 V++P+ R+ + TA K + GAAE VP+ RVTN+AR++ L+++ N+W VG Sbjct: 121 GVVIPERRAVGVTGTAMKASAGAAEYVPIARVTNIARSIEDLKDKYNVWTVGLDERGTQN 180 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + LALV+GAEG+G+ L R+ CD L+ IPMAG VSSLNVSVA GI ++E RQ Sbjct: 181 YDEIDYNMSLALVLGAEGKGLHDLVRKKCDLLVKIPMAGEVSSLNVSVAGGIVMYEVSRQ 240 Query: 242 R 242 R Sbjct: 241 R 241 >UniRef50_A4XJ85 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=A4XJ85_CALS8 Length = 253 Score = 291 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 77/239 (32%), Positives = 134/239 (56%), Gaps = 2/239 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I G + V+ L + + EV+I +DK + +I+ + +G+V++ ++ +D+ S Sbjct: 4 IEGKNPVKEALNSSTQ-ITEVYISNTTKDKSISEIINLCKQKGIVVKFVDKSKIDKMSKT 62 Query: 65 AVHQGIIARVKPGRQYQENDLP-DLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QG+IA + + + +DL + ++PFL++LD +TDPHN G+ +RSA G H Sbjct: 63 KNPQGVIAIAQEYKYWDIDDLLLEAANKGEKPFLVLLDEITDPHNFGSIIRSAHLCGAHG 122 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I S + T +K + GA E + + RV NL RT+ L+E+ +W+ A+ +Y Sbjct: 123 IITEARNSCPITPTVEKASAGAIEHIKVARVVNLRRTIDSLKEKGVWVYAADNNAEKFVY 182 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + +++G+EG+G+ RL +E D L+ IP G ++S N SVA GI FE ++QR Sbjct: 183 DCDFKIPICIIIGSEGKGISRLVKEGADFLVKIPQKGKINSYNASVAAGIIFFEVLKQR 241 >UniRef50_C2HJX9 tRNA/rRNA methyltransferase n=3 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2HJX9_PEPMA Length = 244 Score = 289 bits (741), Expect = 6e-77, Method: Composition-based stats. Identities = 90/243 (37%), Positives = 144/243 (59%), Gaps = 3/243 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M ++ G + V LE ++I KG + + G+ ++ +++Y+++ Sbjct: 1 MQYLV-GRNPVMEALEMDM-GVTNIYIQKGELKGFIKKIEKKAYDMGIRVEYVDKKYIEK 58 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIAS-LDQPFLLILDGVTDPHNLGACLRSADAA 119 ++ HQG++A++ +++ + PFL+ILD +TDPHNLG+ +R+A+ A Sbjct: 59 FAENTAHQGVMAKMPSFGYSSVDEMIIYAKKINEDPFLIILDEITDPHNLGSIIRTAEVA 118 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G H VI+PK R+ ++NATA K + GA ++ + RVTN+ T+ L+E NIWI G GEA Sbjct: 119 GCHGVIIPKHRACEVNATAIKTSAGAVFNIKIARVTNITTTINYLKEHNIWIYGACGEAS 178 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 T Q+ + G + LV+G EG+G+ RL RE+CD+LI IPM G SLN S A I ++E + Sbjct: 179 QTHTQANLKGPIGLVIGNEGKGISRLVRENCDQLIKIPMYGKTESLNASNAASILIYEII 238 Query: 240 RQR 242 RQR Sbjct: 239 RQR 241 >UniRef50_Q88DE7 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=285 Tax=Proteobacteria RepID=RLMB_PSEPK Length = 248 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 140/245 (57%), Positives = 184/245 (75%), Gaps = 4/245 (1%) Query: 1 MSEM--IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 MS++ IYG+HAVQALL+ P+R +++++ +GR + RL L+ V + A R+ + Sbjct: 1 MSQLEKIYGVHAVQALLQHHPKRVKQIWLSEGRSEPRLETLLALAAENRVPVGQAERREM 60 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRSAD 117 D +G VHQG++A V P + + E L +L+ + P +L+LDGVTDPHNLGACLR+AD Sbjct: 61 DAWVEG-VHQGVVAEVSPSQVWGELMLEELLERTETPPLILVLDGVTDPHNLGACLRTAD 119 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 AAG AVIVPKD+SA L +KVACGAAE +PL+ VTNLART+ LQ+ +W+VGTAGE Sbjct: 120 AAGATAVIVPKDKSATLTPVVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGE 179 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 A+ +YQ +TG L ++MGAEG+GMRRLTREHCD L+ +PMAGSVSSLNVSVATG+CLFE Sbjct: 180 AEQEIYQQDLTGPLVMIMGAEGKGMRRLTREHCDFLVKLPMAGSVSSLNVSVATGVCLFE 239 Query: 238 AVRQR 242 AVRQR Sbjct: 240 AVRQR 244 >UniRef50_C3RMB5 23S rRNA methyltransferase n=5 Tax=Bacteria RepID=C3RMB5_9MOLU Length = 244 Score = 288 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 83/243 (34%), Positives = 136/243 (55%), Gaps = 4/243 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M + IYG + + L+ + V++ +D +I + + + ++ ++ + Sbjct: 4 MKQYIYGKNTILEALK-GDKSVYTVYVQNNAKDNG---IIEQCKRKKIPFKIVDKSEFIK 59 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 K HQG++A ++ R Y +++ + I QP LL+LDG+ DPHNLGA LR+ DA G Sbjct: 60 KLGNVSHQGVMAEIEEYRYYSIDEIINTIPDGKQPLLLMLDGLEDPHNLGAILRTCDAIG 119 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V VI+ K+RS LN T KV+ GA + V + +VTNL RT+ L++ + W+VG + Sbjct: 120 VDGVIIGKNRSVGLNGTVAKVSTGAIDHVKVAQVTNLTRTLEDLKKRSFWVVGCDLDKSQ 179 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 Q L +V+G+EG G+ RL ++ CD + +PM G V+SLN SVAT + L++ Sbjct: 180 DYRQVDYNMPLVIVIGSEGFGISRLVKKSCDINVVLPMVGHVNSLNASVATAVILYQVYN 239 Query: 241 QRS 243 R+ Sbjct: 240 SRN 242 >UniRef50_B0K5F8 RNA methyltransferase, TrmH family, group 3 n=51 Tax=Firmicutes RepID=B0K5F8_THEPX Length = 247 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 85/245 (34%), Positives = 146/245 (59%), Gaps = 5/245 (2%) Query: 1 MSE--MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 M E +I+G + V ++ E +++++ K + +I+ + G+V+ + L Sbjct: 1 MEEQNVIFGRNPVIEAIKSGKE-IEKIYVSK-TAGGNISKIINFAKEAGIVVSTTDNDTL 58 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIA-SLDQPFLLILDGVTDPHNLGACLRSAD 117 E + HQG++A + ++ +DL + ++PFLLILD +TDPHNLGA +RSA+ Sbjct: 59 SELAGSRNHQGVVALSAVYKYFEVDDLLEYAEQKKEKPFLLILDEITDPHNLGAIIRSAE 118 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A GVH +I+PK R+ +NAT K + GA E + + +V+N+ T+R L+E +WIVGT Sbjct: 119 AFGVHGIIIPKRRAVGVNATVVKTSAGAVEHMRIAKVSNINNTIRDLKERGLWIVGTDVN 178 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 A+ + + +A V+G EG+G+ +L ++CD ++ IPM G ++SLN SVA I +++ Sbjct: 179 AEKSFEELNYDFPVAFVIGNEGKGVSKLVLQNCDFVVKIPMKGKINSLNASVAASILIYQ 238 Query: 238 AVRQR 242 V +R Sbjct: 239 VVSKR 243 >UniRef50_P74328 Uncharacterized tRNA/rRNA methyltransferase slr0955 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Y955_SYNY3 Length = 384 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 97/242 (40%), Positives = 142/242 (58%), Gaps = 3/242 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +++YG HAV A L+ + ++I R D R I ++ G V+ + L++ Sbjct: 124 DLLYGHHAVLAALD-GDRQLNRIWITSHLRHDIRYRTKIQTAKANGTVVDEVDNFRLNQI 182 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSADAAG 120 + A HQGI A+V P ++ DL D S P L+I+D +TDPHNLGA +R+A+A G Sbjct: 183 THNANHQGIAAQVAPYHYWELGDLIDKAKSQSTAPVLIIIDSITDPHNLGAIIRTAEAFG 242 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +++P+ R A + +T KVA GA E P+ RV NL+R + L+E WI GT Sbjct: 243 AQGMVLPQRRVAGITSTVMKVAAGALEHFPVARVVNLSRALETLKESGFWIYGTVAGKQT 302 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 L+Q+ + + LV+G+EGEG+ LT++HCD LI+IP+AG SLN SVA I L+E R Sbjct: 303 ALHQADLREPMGLVIGSEGEGLSLLTQKHCDHLITIPLAGKTPSLNASVAAAISLYEIFR 362 Query: 241 QR 242 QR Sbjct: 363 QR 364 >UniRef50_Q1J4P0 23S rRNA Gm2251 methyltransferase n=42 Tax=Lactobacillales RepID=Q1J4P0_STRPF Length = 257 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 88/241 (36%), Positives = 136/241 (56%), Gaps = 3/241 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++++YG+HAV L+ +++I + K++ + + V I ++ L + Sbjct: 19 NDIVYGVHAVTESLQANTG--NKLYIQEDLRGKKVDNIKSLATQKKVAISWTPKKTLSQM 76 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 +DGAVHQG + RV +++ ++ P +LILDG+TDPHNLG+ LR+ADA V Sbjct: 77 TDGAVHQGFVLRVSAFAYTDVDEILEIAEQEANPLILILDGLTDPHNLGSILRTADATNV 136 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+PK RS + K + GA E +P+ RVTNL++T+ L+ WI GT + Sbjct: 137 CGVIIPKHRSVGVTPVVSKTSTGAVEHIPIARVTNLSQTLDKLKARGFWIFGTDMNGTPS 196 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 G+LALV+G EG+G+ ++ DE+I+IPM G V SLN SVA I ++E R Sbjct: 197 -DCWNTNGKLALVIGNEGKGISTNIKKQVDEMITIPMNGHVQSLNASVAAAILMYEVFRN 255 Query: 242 R 242 R Sbjct: 256 R 256 >UniRef50_Q9JZR3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=27 Tax=Neisseria RepID=RLMB_NEIMB Length = 250 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 122/239 (51%), Positives = 160/239 (66%), Gaps = 3/239 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 IYG HAV A L + P+ E++I +G+ D R ++ ++ + + A+ L+ S G Sbjct: 7 IYGFHAVNARLWQNPKSIVELYIQEGKSDARTREVLEKAANENIRVYFADADRLNAISKG 66 Query: 65 AVHQGIIARVKPGR-QYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 A HQG++ + + D+ + ++ + P LLILDG+TDPHNLGACLR+ADA GVHA Sbjct: 67 ARHQGVVGFIDASKNHVHLEDVLENLS--EPPLLLILDGITDPHNLGACLRTADAMGVHA 124 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VI PKD+SA LNAT KVACGAAE+VP I VTNLART+R L+E IWI+GT + LY Sbjct: 125 VIAPKDKSAGLNATVSKVACGAAETVPYITVTNLARTLRELKEYGIWIIGTDMSGESDLY 184 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + A VMG EG+GMRRLTREHCD L+SIPM G+V S+NVSV+ G+ L E RQR Sbjct: 185 HCNLPDSAAWVMGNEGDGMRRLTREHCDMLVSIPMFGTVESMNVSVSAGMVLSETRRQR 243 >UniRef50_B8D0A6 RNA methyltransferase n=11 Tax=Firmicutes RepID=B8D0A6_HALOH Length = 244 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 88/239 (36%), Positives = 139/239 (58%), Gaps = 2/239 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I G + V ++ +++FI +G K++ +I + +Q A + +LD+K+ Sbjct: 4 IEGRNPVIEAIKSG-RTIKKIFIQEGVRGKKVDRIIKEASRFNIPLQKAKKDFLDKKARS 62 Query: 65 AVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGIIA + ++ ++ + PF++ILD V DPHNLGA +R+A AAG H Sbjct: 63 HSHQGIIAMADDIKYVSPREMVEIAREKGEDPFIIILDQVQDPHNLGAIIRTAYAAGAHG 122 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I P+ RSA + K + GA +PL +V+N+ T+ L++ +WI GT Y Sbjct: 123 LIYPRKRSADITPVVTKASAGAVNHLPLAKVSNINYTIADLKDMGLWITGTDVRGTRPYY 182 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + G + LV+G EG+GMRRL +E+CD +++IPM+G + SLN SVA G+ +FE VRQR Sbjct: 183 SADYKGPVGLVIGNEGKGMRRLVKENCDFVVNIPMSGELGSLNASVAAGVVIFEVVRQR 241 >UniRef50_Q606P1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Methylococcus capsulatus RepID=Q606P1_METCA Length = 250 Score = 286 bits (733), Expect = 5e-76, Method: Composition-based stats. Identities = 116/240 (48%), Positives = 157/240 (65%), Gaps = 1/240 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 ++GIHA +A L+ +P++ + ++ R RL + L+ GV I A+R+ LD +D Sbjct: 7 VWGIHAAEAALDYSPDKIVKAWLDDHRMQNRLQAVATRLDELGVEIVRADRKRLDRLADP 66 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGI+ + + E +L D + + D P L+LD V DPHNLGACLR+ DAAGV Sbjct: 67 RKHQGILLELDLPGEQGEAELLDTLDAADGHPLYLVLDHVQDPHNLGACLRTCDAAGVKG 126 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 ++V KD+S L T KVA GAAE+VP+ RVTNLAR + ++ W+VG AGEA+ TLY Sbjct: 127 LVVTKDQSVGLTPTVAKVASGAAETVPVYRVTNLARCLDRFKQRGYWVVGAAGEAERTLY 186 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 + + L +VMGAEG G+RRLTRE CD L+ IPM G V SLN+SVATGI L+E +RQRS Sbjct: 187 ELDLRLPLVVVMGAEGVGLRRLTRERCDFLLRIPMVGGVESLNLSVATGIVLYEVMRQRS 246 >UniRef50_A6BKK3 Putative uncharacterized protein n=6 Tax=Bacteria RepID=A6BKK3_9FIRM Length = 265 Score = 286 bits (732), Expect = 6e-76, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 132/242 (54%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +I G +AV ++++L G +D + +I ++ + L++ Sbjct: 24 ENIIEGRNAVMEAFRSGK-PVDKLYVLDGCQDGAVRSIIREARKHDTILNFVEKDRLNQL 82 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIA-SLDQPFLLILDGVTDPHNLGACLRSADAAG 120 S+ HQG+IA V + D+ L + PFL+ILD + DPHNLGA +R+A+ AG Sbjct: 83 SETGKHQGVIASVAAYEYAEVEDMLKLAEEKGEDPFLIILDNIEDPHNLGAIIRTANQAG 142 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 H VI+PK R+ L AT + + GA P+ +VTNL +TM L+++ +W V + D Sbjct: 143 AHGVIIPKRRAVGLTATVARTSAGALNYTPVAKVTNLVKTMEDLKKKGLWFVCADMDGDV 202 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +Y M G + LV+G EGEG+ RL ++ CD IPM G + SLN SVA G+ +E VR Sbjct: 203 -MYDVNMKGPIGLVIGNEGEGVGRLVKDTCDFTARIPMKGDIDSLNASVAAGVLAYEIVR 261 Query: 241 QR 242 QR Sbjct: 262 QR 263 >UniRef50_C1F8Y2 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Y2_ACIC5 Length = 270 Score = 286 bits (732), Expect = 6e-76, Method: Composition-based stats. Identities = 100/244 (40%), Positives = 139/244 (56%), Gaps = 4/244 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRED----KRLLPLIHALESQGVVIQLANRQYL 58 +++YG+H V+ L +F V + + R+D ++L ++ S+GV ++ NR+ L Sbjct: 2 DVLYGLHPVEEALRAGSRKFDHVCVSRERQDHGAAQKLQRIVDLCRSEGVRLRFENREQL 61 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 + HQG++A V+ DL A LL LDGV DP NLGA LRSAD Sbjct: 62 TRMAKTHAHQGVVAVVRERSFLTIEDLMAAPADGHPHLLLALDGVEDPQNLGALLRSADG 121 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AGV V++P+ RSA L+A A K + GAAE + + RV NL R + L+E+NIW VG Sbjct: 122 AGVDGVLLPERRSAPLSAVAVKTSAGAAEHIRIARVVNLVRALEQLKEQNIWCVGLDERG 181 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + T +V+G EGEG+ L R+ CD L+ IPMAG VSSLNVS A + L+EA Sbjct: 182 TMSYDAYDWTTPSVVVLGREGEGLHDLVRKTCDHLVRIPMAGGVSSLNVSAAGAVVLYEA 241 Query: 239 VRQR 242 RQR Sbjct: 242 ARQR 245 >UniRef50_Q7MBB6 tRNA/rRNA methyltransferase n=1 Tax=Gloeobacter violaceus RepID=Q7MBB6_GLOVI Length = 338 Score = 286 bits (732), Expect = 7e-76, Method: Composition-based stats. Identities = 97/241 (40%), Positives = 146/241 (60%), Gaps = 2/241 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E++YG +V A L+ + V++ + R D R L L+ A ++ G VI + + LD+ Sbjct: 91 ELLYGKQSVLAALQNS-RPLNRVWLTEKLRYDPRFLRLLDAAKAGGAVIDIVEPRRLDQL 149 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + G HQG+ A+ + +L + P LL DG+ DPHNLGA +RSA+A G Sbjct: 150 TAGGNHQGVAAQAAAHPYVEFEELIASLVERPDPVLLAADGIEDPHNLGALIRSAEAFGF 209 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +I+P+ R+ + AT KVA GA E +P+ RVTNL + + L+E +VGT +A Sbjct: 210 QGIILPQRRAVGVTATVAKVAAGAVEHLPIARVTNLNQAIERLKEAGYQVVGTQEKASQA 269 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 LY+ K+ G L +V+G+EG+G+ LT+ HCD ++SIP+AG +SLN SVA GI L+E +RQ Sbjct: 270 LYELKLDGPLVVVVGSEGKGISLLTQRHCDHMVSIPLAGKTTSLNASVAGGIMLYEVMRQ 329 Query: 242 R 242 R Sbjct: 330 R 330 >UniRef50_Q06753 Putative trmH family tRNA/rRNA methyltransferase yacO n=86 Tax=Bacteria RepID=YACO_BACSU Length = 249 Score = 286 bits (732), Expect = 7e-76, Method: Composition-based stats. Identities = 94/242 (38%), Positives = 142/242 (58%), Gaps = 3/242 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 + + G +AV L+ + ++++ + + +I + QG+ IQ R+ LD+ Sbjct: 6 DYVIGKNAVIETLKSD-RKLYKLWMAENTVKGQAQQVIELAKKQGITIQYVPRKKLDQMV 64 Query: 63 DGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 HQG++A+V + +DL +QPF LILD + DPHNLG+ +R+ADA G Sbjct: 65 -TGQHQGVVAQVAAYEYAELDDLYKAAEEKNEQPFFLILDELEDPHNLGSIMRTADAVGA 123 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H +++PK R+ L T K + GA E +P+ RVTNLART+ ++E IW+VGT A Sbjct: 124 HGIVIPKRRAVGLTTTVAKASTGAIEHIPVARVTNLARTLEEMKERGIWVVGTDASARED 183 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 LALV+G+EG+GM RL +E CD LI +PMAG V+SLN SVA G+ ++E R+ Sbjct: 184 FRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRK 243 Query: 242 RS 243 R+ Sbjct: 244 RN 245 >UniRef50_Q83CW6 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Proteobacteria RepID=RLMB_COXBU Length = 250 Score = 284 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 126/245 (51%), Positives = 169/245 (68%), Gaps = 4/245 (1%) Query: 1 MSEM--IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 MS++ IYGIHAV +L+ AP+R ++++ + R+D+RL L+ ++ GV + L +R L Sbjct: 1 MSKIKSIYGIHAVSGVLDAAPQRIVKLYVQENRDDQRLQSLVEKAKALGVKVILLSRTEL 60 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSAD 117 + S HQGI+A + E+ L L+ + P LLILDGV DPHNLGACLRSA+ Sbjct: 61 NTLS-NEKHQGIVADCEEVENLDESALLSLLKKRETPALLLILDGVKDPHNLGACLRSAN 119 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A GV AVI PKDR+ + +KVACGAAE P IRVTNL+RT+ LQ+E +WIVGTA E Sbjct: 120 AFGVRAVIAPKDRAVGVTPVVRKVACGAAEMTPFIRVTNLSRTIDWLQKEGVWIVGTAVE 179 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 A+ + + +TG +A+V+G+EG G+RRLT+E CD L IP+ GSV SLNVSVA GICL+E Sbjct: 180 AETLIQEIDLTGDIAIVLGSEGAGLRRLTKERCDFLAQIPLRGSVESLNVSVACGICLYE 239 Query: 238 AVRQR 242 RQR Sbjct: 240 VQRQR 244 >UniRef50_B2A4B9 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4B9_NATTJ Length = 247 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 132/242 (54%), Gaps = 3/242 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G + V + + ++I K ++ + + + LD+ Sbjct: 6 LVPGKNPVVEAIR-GNRKVFRIYISKDSNKNFQDEMLKLAQQHNINLDKVPLDRLDKMVP 64 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIA--SLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 HQGI+A +P + Q + + + LLILD +TDP N GA +R+ADA GV Sbjct: 65 TTEHQGIVAETEPFKYSQLDTVLKGFDYNNQKPLTLLILDHLTDPQNFGAIIRTADAVGV 124 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+PK RS +N T K + GAAE VP+I+V+NL +T+ L+E+ IWI+GT + D Sbjct: 125 DGVIIPKRRSVDVNPTVMKASSGAAEHVPIIKVSNLRQTISKLKEQWIWILGTDIDGDRG 184 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +++ LALV+G E GM L ++ CD + +IPM G V+SLN SVAT + L+E RQ Sbjct: 185 IFEENYNIPLALVVGNEASGMSPLVKKECDFIANIPMIGRVNSLNASVATAVVLYEIYRQ 244 Query: 242 RS 243 ++ Sbjct: 245 KT 246 >UniRef50_Q4L3J1 Putative trmH family tRNA/rRNA methyltransferase n=10 Tax=Bacilli RepID=TRMHL_STAHJ Length = 249 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 86/244 (35%), Positives = 136/244 (55%), Gaps = 4/244 (1%) Query: 1 MSEM-IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLD 59 M ++ I G HAV+ + +++I +G +++ ++ + Q +++Q + LD Sbjct: 1 MEDIVIVGRHAVKEAIVSG-HTINKIWIQEGIRKQQINDILQNAKEQKLIVQTVPKSKLD 59 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADA 118 + A HQG+ A + P + + ++ILDG+ DPHNLG+ LR+ADA Sbjct: 60 NLA-NAPHQGVAALIAPYEYADFDQFIQSQKDKEGLSTVVILDGLEDPHNLGSILRTADA 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 +GV VI+PK RS L T K + GA + VP++RVTNLA+T+ L+E W+ G + Sbjct: 119 SGVDGVIIPKRRSVALTQTVAKASTGAIQHVPVMRVTNLAKTIDELKEHGYWVAGAEADN 178 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 LA+V+G+EG+GM RL ++ CD I IPM G V+SLN SVA + ++E Sbjct: 179 ATDYRDMAADMPLAIVIGSEGQGMSRLVKDKCDFYIKIPMVGHVNSLNASVAASLMMYEV 238 Query: 239 VRQR 242 R+R Sbjct: 239 YRKR 242 >UniRef50_Q1G8Z2 TRNA/rRNA methyltransferase n=109 Tax=Bacilli RepID=Q1G8Z2_LACDA Length = 255 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 87/242 (35%), Positives = 138/242 (57%), Gaps = 2/242 (0%) Query: 2 SEMIYGIHAVQALLE-RAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 ++ ++G HA L+ + E+ +VF+ +G ++ + + + ++IQ + LD+ Sbjct: 12 NDFVFGRHAGIDFLKTQDSEKINKVFLAEGVQEDFAREVYRYAKKKHLIIQRVPKNKLDK 71 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + G HQG++ V + L D + + P LL+LD + DPHNLG+ LRSADA G Sbjct: 72 LTGGENHQGLVLAVASFEYADFDQLLDKLDQEEAPLLLMLDNIEDPHNLGSILRSADATG 131 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V VI+PK R++ L + K + GA + VP+ RV NL +T + L++ WI GTA E D Sbjct: 132 VSGVIIPKRRASGLTSVVAKTSTGAIDHVPVARVNNLVQTCQALKDRGYWIFGTAMEGD- 190 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + G+ LV+G EG+G+ L + D+ ++IPM G V SLN SVATG+ L++A Sbjct: 191 DYRKWNANGKTVLVIGNEGKGISPLLLKQMDQTLTIPMIGHVQSLNASVATGVLLYQAFN 250 Query: 241 QR 242 R Sbjct: 251 SR 252 >UniRef50_A8PMQ1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Rickettsiella grylli RepID=A8PMQ1_9COXI Length = 253 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 111/246 (45%), Positives = 156/246 (63%), Gaps = 5/246 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E I+G H + ALL+ AP++ ++ + R+DKR+ + + + G+ I ++ +E Sbjct: 7 KEFIFGFHTITALLKSAPQKIDTLYCREDRQDKRVQSIRNLAKLHGIPIGTLSKVQCNEI 66 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASL-----DQPFLLILDGVTDPHNLGACLRSA 116 + AVHQG+ A++K + E DL + + PFLL+LDGV DPHNLGACLRSA Sbjct: 67 APNAVHQGVFAKIKKTSRLNEQDLMIFLHHRLHNNLNPPFLLVLDGVQDPHNLGACLRSA 126 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 +AAGV AVI+P+DR+ +K A GAAE L VTNLA + L++ IW G Sbjct: 127 NAAGVDAVIIPQDRAVNKTPIVQKTAAGAAEVTSLFTVTNLATCLERLKKCGIWCYGLDQ 186 Query: 177 EADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 +Y + +TG LALV+GAEG+G+RRLT+ CD+L++IPM G+V SLNVSVA G+ LF Sbjct: 187 SGTRLIYDAPLTGPLALVLGAEGKGLRRLTKVCCDDLVAIPMVGTVGSLNVSVAAGVGLF 246 Query: 237 EAVRQR 242 E VRQR Sbjct: 247 EVVRQR 252 >UniRef50_Q1D7V2 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Bacteria RepID=Q1D7V2_MYXXD Length = 282 Score = 283 bits (725), Expect = 4e-75, Method: Composition-based stats. Identities = 89/243 (36%), Positives = 143/243 (58%), Gaps = 2/243 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLL-PLIHALESQGVVIQLANRQYLDE 60 S +YG++ V A L P+ + +F+++G+ R L+ G+ ++ R+ L Sbjct: 34 SRFVYGVNPVLAALRARPDEVERLFLVEGQLGARAAGELLSRAREFGIRVEKVTRERLGT 93 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIAS-LDQPFLLILDGVTDPHNLGACLRSADAA 119 ++G VHQG++ ++ + + DL + + P +++LDG+ DPHNLGA +RSADA Sbjct: 94 LAEGGVHQGVVVELRGFKYAELEDLLEAAKALGQPPLVVVLDGIQDPHNLGAIIRSADAL 153 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G H V++ KDR+ Q+ T K + GA E + RV N++R + L+E +W+ +A Sbjct: 154 GAHGVVIAKDRAVQVTGTVAKASAGAVEHSRIARVVNISRALEELKEAGLWVAAADVDAK 213 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 ++ +++ G LALV+GAEG G+R +HCD + IPMAG V SLN SV+ GI L+E Sbjct: 214 EPMWSARLDGPLALVVGAEGAGVRDGVLKHCDFRLRIPMAGQVGSLNASVSAGILLYEVA 273 Query: 240 RQR 242 RQR Sbjct: 274 RQR 276 >UniRef50_B2IX93 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IX93_NOSP7 Length = 363 Score = 282 bits (724), Expect = 5e-75, Method: Composition-based stats. Identities = 90/243 (37%), Positives = 140/243 (57%), Gaps = 2/243 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 +++IYG H V + L++ ++I + R D + + G VI + LD Sbjct: 106 NDIIYGRHPVLSALQK-QRNLNRIWITTRLRYDPSFHHFLLQAKENGTVIDEVEPKRLDY 164 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 ++GA HQG+ A+ P + DL + S+ P +++ DG+TDPHNLGA +R+A+A G Sbjct: 165 LTNGANHQGVAAQTAPYGYIELADLIEQSKSVTDPVIVVADGITDPHNLGAIIRTAEAIG 224 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +++P+ R++ + +T KVA GA E+ + RV NL+R + L+E WI GTA Sbjct: 225 AQGLVIPQRRASGITSTVMKVAAGALENFTVSRVVNLSRALEELKEAGFWIYGTAASGSE 284 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++ G + LV+G+EGEG+ LT+ CD L+SIP+ G SLN SVA G+ L+E R Sbjct: 285 PVHTVNFKGPIVLVIGSEGEGLGMLTQRSCDFLVSIPLQGKTPSLNASVAAGMALYEIYR 344 Query: 241 QRS 243 QRS Sbjct: 345 QRS 347 >UniRef50_B8HJN1 RNA methyltransferase, TrmH family, group 3 n=6 Tax=Bacteria RepID=B8HJN1_CYAP4 Length = 387 Score = 282 bits (724), Expect = 6e-75, Method: Composition-based stats. Identities = 98/242 (40%), Positives = 142/242 (58%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S++IYG H + A LE + + + + R D R L+ ++ GVVI + LD+ Sbjct: 126 SDLIYGRHTLLAALESERQLNRIWVVNQLRYDPRFHSLLLQAKAAGVVIDEVDYLRLDQI 185 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + A HQGI A+V P + + L + I LD P LL DG+TDPHNLGA +R+A+A G Sbjct: 186 TAHAKHQGIAAQVAPYSYLELDTLLENIQGLDHPVLLAADGITDPHNLGAIIRTAEALGA 245 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 ++VP+ R+ + +T KVA GA E + RV NL + + L+ WI G A A Sbjct: 246 QGLVVPQRRAVGITSTVAKVAAGALEHFAVARVVNLNQALEQLKAAGFWIYGMAATAAKP 305 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +Y + +G + LV+GAEG G+ L + +CD+L+SIP+ G SLN SVATG+ L+E RQ Sbjct: 306 IYSVEFSGPVVLVVGAEGTGLSLLAQRYCDQLVSIPLLGKTPSLNASVATGMALYEIFRQ 365 Query: 242 RS 243 RS Sbjct: 366 RS 367 >UniRef50_B8G1U5 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Firmicutes RepID=B8G1U5_DESHD Length = 246 Score = 282 bits (723), Expect = 6e-75, Method: Composition-based stats. Identities = 97/241 (40%), Positives = 146/241 (60%), Gaps = 3/241 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E++YG +AV LL+ ++ + R ++ +Q + Q ++ LD + Sbjct: 4 EIVYGRNAVWELLQSGK-PVNKLLLQGEGTAGRFQDIVSHARAQKIPFQFVDKAALDRLT 62 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + A HQGI+A V P + +D+ L + PF+L+LD V DPHNLGA +R+ADAAGV Sbjct: 63 EKAKHQGILAYVAPREYAEVDDILALAGEKGEDPFILVLDEVEDPHNLGALIRTADAAGV 122 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H VI+PK RS L AT K + GA E V + RV NL +T++ LQ+ W+ G E Sbjct: 123 HGVIIPKRRSVSLTATVAKTSAGAVEHVLVARVGNLVQTLKDLQKAGCWVSGAEAEG-TE 181 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +Y+S +TG +V+G+EG+G+ RL +E CDE++S+PM G ++SLN SVA I ++E +RQ Sbjct: 182 VYRSDLTGARVIVIGSEGKGLSRLVKETCDEIVSLPMKGRINSLNASVAGSILMYEVLRQ 241 Query: 242 R 242 R Sbjct: 242 R 242 >UniRef50_Q5HIE3 Putative trmH family tRNA/rRNA methyltransferase n=86 Tax=Firmicutes RepID=TRMHL_STAAC Length = 248 Score = 282 bits (723), Expect = 8e-75, Method: Composition-based stats. Identities = 89/244 (36%), Positives = 135/244 (55%), Gaps = 4/244 (1%) Query: 1 MSE-MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLD 59 M + +I G HAV+ + ++ I +G + +++ ++ + Q +++Q + LD Sbjct: 1 MEDTVIVGRHAVREAIITG-HPINKILIQEGIKKQQINEILKNAKDQKIIVQTVPKSKLD 59 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPF-LLILDGVTDPHNLGACLRSADA 118 + A HQG+ A + P + + +LILDG+ DPHNLG+ LR+ADA Sbjct: 60 FLA-NAPHQGVAALIAPYEYADFDQFLKQQKEKEGLLTVLILDGLEDPHNLGSILRTADA 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 GV VI+PK RS L T K + GA E VP+IRVTNLA+T+ L++ W+ GT Sbjct: 119 TGVDGVIIPKRRSVTLTQTVAKASTGAIEHVPVIRVTNLAKTIDELKDNGFWVAGTEANN 178 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + LA+V+G+EG+GM RL + CD I IPM G V+SLN SVA + ++E Sbjct: 179 ATDYRNLEADMSLAIVIGSEGQGMSRLVSDKCDFYIKIPMVGHVNSLNASVAASLMMYEV 238 Query: 239 VRQR 242 R+R Sbjct: 239 FRKR 242 >UniRef50_A8RFN1 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8RFN1_9FIRM Length = 241 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 82/243 (33%), Positives = 135/243 (55%), Gaps = 4/243 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M++ +YG + V+ L ++ E+ + G DK L + + + ++ +R+ +D Sbjct: 1 MTQYVYGKNVVK-ALLADKKKVYEIILSDGFRDK---ELEQEIRKRKIPCKVNSRKKMDT 56 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 G+ HQGI A++ + Y +L + P ++LD + DPHNLGA LR+ D G Sbjct: 57 MFSGSNHQGIAAKIDDYKTYTIEELVAGVPKGKTPLFVMLDELEDPHNLGAILRTCDCVG 116 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V VI+ K R +L T KV+ GA ++V + VTNLA+T++ L++E W+ G + Sbjct: 117 VDGVIIGKHRGVKLTPTVAKVSTGAIDTVKVAVVTNLAQTLKGLKKEGFWVAGADFDNSQ 176 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 Q+ L LV+G+EG G+ L +++CD + +PM GSVSSLN SVA + L++ Sbjct: 177 DYRQASYDMPLVLVVGSEGFGISPLVKKNCDFFVRLPMEGSVSSLNASVACAVLLYQIYA 236 Query: 241 QRS 243 QR+ Sbjct: 237 QRN 239 >UniRef50_B0TC37 RNA methyltransferase, trmh family n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC37_HELMI Length = 256 Score = 281 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 90/240 (37%), Positives = 140/240 (58%), Gaps = 4/240 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +++ G V L+ ++ + KG + + ++ +G+ I R LD Sbjct: 11 DLLAGRQPVMEALKSG-RAINKLVVAKGAREGSIREILGMARDRGIPITELERTVLDR-- 67 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + HQGIIA V P + ++ + A + PF+L+LDG+ DPHN+GA LR+A+ AG Sbjct: 68 EVRHHQGIIAHVAPVAYVEVEEILEKAKAKGEPPFVLLLDGLEDPHNIGALLRTAEGAGA 127 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H VI+PK R + +T K + GA E VP+ RVTNL +T+ L++ +WI+G+A +A Sbjct: 128 HGVIIPKRRGGAITSTVAKASAGAVEYVPIARVTNLVQTVGQLKKAGLWIIGSAMDAPRP 187 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 ++ G + L++G+EG+G+ L REHCD L+SIPM G V SLN SVA + ++E VRQ Sbjct: 188 YFRQDFRGPVGLIVGSEGKGISPLLREHCDHLVSIPMGGKVDSLNASVAGALLMYERVRQ 247 >UniRef50_A8ZSH6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSH6_DESOH Length = 256 Score = 280 bits (718), Expect = 3e-74, Method: Composition-based stats. Identities = 102/242 (42%), Positives = 142/242 (58%), Gaps = 1/242 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKR-LLPLIHALESQGVVIQLANRQYLDE 60 SE +YGIH V A + + +FI GRE ++ + A E + + + L++ Sbjct: 7 SETLYGIHPVMAAITAGRRKVDTLFIASGRETRQPHQQALQAAEQHNIPVNEIPARDLEQ 66 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + G VHQGI ARV DL + S D PF+L+ DG+TDPHNLGA R+A AG Sbjct: 67 MTGGKVHQGIAARVSVYPFVPLADLLAAVPSTDTPFILVADGLTDPHNLGALARTALCAG 126 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VH +I+PKD +A A K + GA E +P+ R TN+AR + L++ +WI G G + Sbjct: 127 VHGLIIPKDNAASPTPAAVKASAGALEFLPVARETNIARVLDALKDAGLWIAGLDGRGEQ 186 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 T+Y S +TG LALV+G EG G+RRL + CD ++SIP V SLN SVA + ++EA R Sbjct: 187 TIYDSDLTGPLALVVGDEGRGIRRLVGQKCDFILSIPQTDMVHSLNASVAGAVAMYEAFR 246 Query: 241 QR 242 QR Sbjct: 247 QR 248 >UniRef50_A1APM1 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Desulfuromonadales RepID=A1APM1_PELPD Length = 251 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 89/240 (37%), Positives = 141/240 (58%), Gaps = 2/240 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E+++G++ V+ L +++ D RL ++ +GV + R+ L Sbjct: 3 EELVFGVNPVREALR-GKREIFGLYVQSTATDHRLDKILELARERGVRVIRREREDLTRM 61 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAAG 120 + HQG+ +V P +DL + D FLL+LDG+ DPHNLGA +R+A AG Sbjct: 62 CGSSHHQGMALKVAPFSYADLDDLIEAGDREDAAGFLLVLDGIQDPHNLGALIRTAACAG 121 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V++P+DR+ + A+K + GA E++ + +VTN+A+++ L+ W+ G +GEAD Sbjct: 122 ASGVVIPRDRACAITPAAEKASAGAVETITVAQVTNIAQSLEKLKRSGYWVYGLSGEADA 181 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +LY+ +G++ALV+G EGEG+R L R+ CD L+SIP+ G V SLN SVA GI L+E R Sbjct: 182 SLYEVAFSGKIALVIGGEGEGIRPLVRKQCDALVSIPLYGGVGSLNASVAGGIALYEVAR 241 >UniRef50_Q2LQ81 23S rRNA Gm2251 methyltransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LQ81_SYNAS Length = 249 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 86/240 (35%), Positives = 136/240 (56%), Gaps = 1/240 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E+IYG++ ++ L E + + +GR + + + + +G+ +++ R +LD+ + Sbjct: 2 EVIYGVNPLREALISGGEGVTRIVVARGRSESSISEIRTLAKQRGIPVEIRERSFLDDLA 61 Query: 63 DGAVHQGIIARVKPGRQYQEND-LPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 A HQG++ R + + + S +LILDG+ DPHNLGA +RSA G Sbjct: 62 GHASHQGVLGVCTAYRYQDLDAVIANRHPSCPYDLVLILDGILDPHNLGALIRSAHCFGA 121 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 + +I+P+ R+A + T K + GAA +P+ RV NLAR + L+ + WI G AD + Sbjct: 122 NGIILPERRAASVTGTVIKTSAGAARHIPIARVANLARALDELKTKGFWIFGADARADQS 181 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + G + LVMG E +G+R L R+ CD+LISIPM G + SLNVSV+ GI L E R+ Sbjct: 182 VSDPDYQGAVGLVMGGESKGLRPLIRKKCDDLISIPMLGKIDSLNVSVSGGIILHEIRRK 241 >UniRef50_Q7NYX3 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=23 Tax=Proteobacteria RepID=RLMB_CHRVO Length = 248 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 130/245 (53%), Positives = 167/245 (68%), Gaps = 5/245 (2%) Query: 1 MSE--MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 MS +I+G HA+ A L + P+ E+++ GR D R ++ ++ V + + +++ L Sbjct: 1 MSNKRLIHGFHAINARLWQNPKSLIEIWLAGGRHDARAKAVLDKAGAENVKLHIVDKERL 60 Query: 59 DEKSDGAVHQGIIARVKP-GRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSAD 117 D S A HQG++A + +D+ + ++ + P LLILDGVTDPHNLGACLR AD Sbjct: 61 DSMSGNARHQGVVAMIDASMNYVDLDDVLENLS--EPPLLLILDGVTDPHNLGACLRVAD 118 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 A G HAVI PKDRSA LNAT KVACGAAE VP I VTNLART+R L++ +WI GT E Sbjct: 119 AMGAHAVIAPKDRSATLNATVSKVACGAAEVVPYITVTNLARTLRDLKDAGVWIAGTTME 178 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 AD LY +G LA VMGAEGEGMRRLTREHCD L+SIPM G+V SLNVSV++G+ L E Sbjct: 179 ADTDLYHFDASGPLAWVMGAEGEGMRRLTREHCDVLVSIPMFGTVESLNVSVSSGMVLSE 238 Query: 238 AVRQR 242 + RQR Sbjct: 239 SRRQR 243 >UniRef50_A2C1X9 RNA methyltransferase TrmH, group 3 n=6 Tax=Cyanobacteria RepID=A2C1X9_PROM1 Length = 442 Score = 276 bits (708), Expect = 4e-73, Method: Composition-based stats. Identities = 88/240 (36%), Positives = 138/240 (57%), Gaps = 3/240 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRED-KRLLPLIHALESQGVVIQLANRQYLDEK 61 ++I+G H+ +A L ++ + L+ ++ GV+++ + L + Sbjct: 177 DLIWGRHSTEAAL-VGGRAIHRIWCTSELRSTPKFFQLLKDQKASGVLVEEVSWSRLGQL 235 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIAS-LDQPFLLILDGVTDPHNLGACLRSADAAG 120 ++GAVHQGI+ ++ + +L D + D LL LDG+TDP NLGA +RSA+A G Sbjct: 236 TNGAVHQGIVLQIAASKTLDLKNLIDACKAFGDSSLLLALDGLTDPQNLGAIIRSAEALG 295 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +I+P+ RSA L + KVA GA E +P+ RV NL R++ L++E +VG A E Sbjct: 296 AQGLILPQRRSAGLTGSVAKVAAGALEHLPVARVVNLNRSLEKLKDEGYTVVGLAEEGSS 355 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 TL + K G L +V+G+E +G+ +TR CD+L+ IP+ G +SLN SVAT I L+E R Sbjct: 356 TLSEIKFQGPLVVVVGSEDKGISLITRRLCDQLVRIPLKGVTTSLNASVATSIFLYEVAR 415 >UniRef50_Q5HRM1 Putative trmH family tRNA/rRNA methyltransferase n=7 Tax=Staphylococcaceae RepID=TRMHL_STAEQ Length = 249 Score = 276 bits (708), Expect = 4e-73, Method: Composition-based stats. Identities = 89/244 (36%), Positives = 137/244 (56%), Gaps = 4/244 (1%) Query: 1 MSEM-IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLD 59 M ++ I G HAV+ + ++ I G + +++ ++ +SQ +++Q + LD Sbjct: 1 MEDIVIVGRHAVKEAIISG-HAINKILIQDGIKKQQINDILKNAKSQKLIVQTVPKSKLD 59 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADA 118 + A HQG+ A V P ++ + ++ILDG+ DPHNLG+ LR+ADA Sbjct: 60 FLA-NAPHQGVAALVAPYEYANFDEFLQKQKKKARYSTVIILDGLEDPHNLGSILRTADA 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 +GV AVI+PK RS L T K + GA + VP+IRVTNL++T+ L++ WI GT Sbjct: 119 SGVDAVIIPKRRSVALTQTVAKASTGAIQHVPVIRVTNLSKTIDELKDNGFWIAGTEANN 178 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + L +V+G+EG+GM RL + CD I IPM G V+SLN SVA + ++E Sbjct: 179 ATDYRDLQADMSLGIVIGSEGQGMSRLVSDKCDFHIKIPMVGHVNSLNASVAASLMMYEV 238 Query: 239 VRQR 242 R+R Sbjct: 239 YRKR 242 >UniRef50_Q1NS81 RNA methyltransferase TrmH, group 3 n=3 Tax=Deltaproteobacteria RepID=Q1NS81_9DELT Length = 302 Score = 276 bits (706), Expect = 7e-73, Method: Composition-based stats. Identities = 99/250 (39%), Positives = 140/250 (56%), Gaps = 14/250 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +++GIH V LL R P +++++ GR+D R+ ++ S + +R L + Sbjct: 47 LVWGIHPVTELLRRRPGLVRKLYLAGGRDDGRVAAIVELAASHRIP---LDRAGLPPAAA 103 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIAS-----------LDQPFLLILDGVTDPHNLGAC 112 HQG+ ARV P +L + + P LL+LD + DPHNLGA Sbjct: 104 ELPHQGVAARVAPPSPLSLAELLQRLPALGPAPASSPAAGPPPLLLVLDSLQDPHNLGAV 163 Query: 113 LRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV 172 LRSA A GV VI+PKDRSA L+ T K A G A + + R TNLA + L++ WI Sbjct: 164 LRSAAAFGVDGVILPKDRSAPLSGTVLKAAAGTAALLDICRTTNLAGALGTLKKHGFWIY 223 Query: 173 GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATG 232 G +GEA LY++ TG LV+G E +G+R L ++HCD L++IP+A V SLNVSVA G Sbjct: 224 GASGEASGNLYETDFTGPTCLVLGNEQKGIRPLLKKHCDFLLAIPLAAGVESLNVSVAAG 283 Query: 233 ICLFEAVRQR 242 I L E R++ Sbjct: 284 IMLAEIRRRQ 293 >UniRef50_Q82XD1 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=112 Tax=Proteobacteria RepID=RLMB_NITEU Length = 260 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 120/243 (49%), Positives = 157/243 (64%), Gaps = 3/243 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S+ I+G HA+ + L + P+ +E+++ R D+R L+ E+ + L + L + Sbjct: 4 SQYIFGFHAITSRLRQHPDSIKEIYLDTNRHDQRARDLMSLAETTSTRLILCEQDRLCKM 63 Query: 62 SDGAVHQGIIARVKPGR-QYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + HQG+ A V R DL + + + LL+LDGV DPHNLGACLR ADA G Sbjct: 64 TGTTRHQGVAAHVTKLRRYATLEDLLEGL--TEPALLLVLDGVKDPHNLGACLRVADAFG 121 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VHAV+VPKDR+ L+AT KVA GA ++VP VTNLART+R L+E +WIVGTA +A Sbjct: 122 VHAVVVPKDRAVGLSATVHKVASGAVDTVPFFAVTNLARTLRELKEMGLWIVGTAADAPD 181 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 TL +T LA V+GAE GMRRLTRE CD L+SIPM+GS+ SLNVSV+ GICLFE R Sbjct: 182 TLDSVTLTRPLAWVLGAEDGGMRRLTREACDLLVSIPMSGSIESLNVSVSAGICLFETFR 241 Query: 241 QRS 243 Q S Sbjct: 242 QHS 244 >UniRef50_Q3AXD9 RNA methyltransferase TrmH, group 3 n=19 Tax=Bacteria RepID=Q3AXD9_SYNS9 Length = 652 Score = 275 bits (705), Expect = 9e-73, Method: Composition-based stats. Identities = 93/241 (38%), Positives = 140/241 (58%), Gaps = 3/241 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++I+G HA QA LE ++ + R + L L+ ++ GV+++ L + Sbjct: 290 DLIWGRHASQAALESG-RPIHRIWCTPEMRSAPKFLQLLREAKTSGVLVEEVTWARLAQV 348 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPD-LIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + G+VHQGI + + L + + P LL LDG+TDPHNLGA +RSA+A G Sbjct: 349 TGGSVHQGIALQTAAADTLDLSALIEGCSELGEPPLLLALDGITDPHNLGAVVRSAEAMG 408 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 H +++P+ RSA L +A KVA GA E +P+ RV NL R++ L++ ++G A E D Sbjct: 409 AHGLVLPQRRSAGLTGSAAKVAAGAMEHLPVARVVNLNRSLEKLKDSGYRVIGLAAEGDV 468 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 TL + G L LV G+E +G+ LTR HCD+L+ IP+ G SLN SVAT +C++E R Sbjct: 469 TLMDVDLEGPLVLVTGSEDQGLSLLTRRHCDQLVRIPLRGITPSLNASVATALCVYEVAR 528 Query: 241 Q 241 + Sbjct: 529 R 529 >UniRef50_C0GIN0 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIN0_9FIRM Length = 245 Score = 275 bits (705), Expect = 9e-73, Method: Composition-based stats. Identities = 85/244 (34%), Positives = 133/244 (54%), Gaps = 4/244 (1%) Query: 1 MSE--MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 M E MI G V L + + + KG K + ++ + V ++ ++ L Sbjct: 1 MEEKRMIEGRRPVMEALRAG-TKITRILLQKGSRGKPVDDILALAKEYSVKVEYLDKAAL 59 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 D+++ HQG++A P R D+ A PFL++LD + DPHNLGA +R+A A Sbjct: 60 DKRATSRNHQGVMAETPPFRYTPFADILAK-AGDKPPFLVLLDHIQDPHNLGALIRTAYA 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AG +I+P+ R+AQ+ A + A GAAE +P+ +V NLAR + ++ +W+ G + Sbjct: 119 AGCDGIIIPERRAAQMTPAAVRTAAGAAEYLPVAKVVNLARCLDECKDAGLWVYGADMDG 178 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + G LV+G+EGEG+ RL +E CD L+ +PM G V+SLN SVA + ++E Sbjct: 179 ESVYTTGDYQGGTVLVIGSEGEGLGRLVKEKCDHLVQLPMQGKVASLNASVAGALLMYEV 238 Query: 239 VRQR 242 RQR Sbjct: 239 YRQR 242 >UniRef50_Q1JXE5 RNA methyltransferase TrmH, group 3 n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXE5_DESAC Length = 244 Score = 275 bits (705), Expect = 9e-73, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 142/240 (59%), Gaps = 3/240 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS+ ++G++AV L + + +++ + + + RL ++ + V ++ R+ LD+ Sbjct: 1 MSQYLFGLNAVFEALGQG-RKVVALYV-EAQRNPRLEEIVAQATERHVAVKQCERRQLDK 58 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 HQG++A+VK L + ++ F LILDG+TDPHN GA +RSA AAG Sbjct: 59 MVGDVRHQGVVAQVKAQDFVSLAQLLAQSSQSER-FFLILDGITDPHNFGALIRSAAAAG 117 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VI KDRS + +K A G V L +VTNL R + L++ +W+ G AGE Sbjct: 118 CQGVIFAKDRSCPVTGIVEKTAAGTLGYVQLCQVTNLGRAIEELKKAGVWVYGLAGEEGQ 177 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +L+++ ++ +ALV G+EG G+R L R+ CD LI+IPM G V SLNVSVATGI LFE VR Sbjct: 178 SLFEAPLSAPIALVAGSEGRGIRPLIRKLCDGLIAIPMPGRVESLNVSVATGIALFEVVR 237 >UniRef50_C5NV68 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NV68_9BACL Length = 271 Score = 275 bits (704), Expect = 1e-72, Method: Composition-based stats. Identities = 85/237 (35%), Positives = 134/237 (56%), Gaps = 3/237 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E+I G +A+ ++ ++ +G E RL + + ++ Q ++ LD Sbjct: 31 KEVIAGRNAILEAIKSG-REINKILFQEGIEKGRLKSIFAIANEKKIICQEVPKRKLDN- 88 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 S HQG+IA V P ++ +++ + + LLILD + DPHNLGA +R+A+A+GV Sbjct: 89 STTERHQGVIAYVAPYSYFELDEVVNNLEINKDTTLLILDHIEDPHNLGAIIRTAEASGV 148 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADH 180 A+I+PK R+A ++ TA K + GA E +P+IRV+NL ++ L+E+ WI GT E Sbjct: 149 KAIIIPKRRAAVVSQTAVKASAGAIEHMPVIRVSNLTDAIKKLKEKGFWIAGTTLAERSE 208 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 + LA+V+G EGEGM ++ CD L +PM G + SLN SVA GI ++E Sbjct: 209 DYTKIAKDVPLAIVIGNEGEGMSKVVTNECDFLYHLPMLGKIQSLNASVAAGIIMYE 265 >UniRef50_C9LMK8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMK8_9FIRM Length = 282 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 95/240 (39%), Positives = 138/240 (57%), Gaps = 4/240 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 I G ++V L ++VFI G++D RLL L E GV + LD ++ Sbjct: 47 FIGGRNSVLESLRAGQ--VKKVFIKSGKKDGRLLALAEEAERLGVAAIETEERTLDRLTE 104 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G HQG+ A +KP ++ D P L++LDGV D N+GA +R+A+ AG A Sbjct: 105 GVRHQGVAASLKPYAYADLEEVLSSCERKD-PLLILLDGVEDVRNIGAIVRTAECAGAAA 163 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++PK RS+ + A A K A GA +P+ ++ N+ +T+ L+E W VG + LY Sbjct: 164 VLLPKHRSSPVTAAAMKTASGAFAYLPVCQIGNIRQTLEKLKERGFWAVGADMDGG-DLY 222 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 Q+ + G L +VMGAEG+G+ LT+ CD + IPM G VSSLNVSVA + ++EAVRQR+ Sbjct: 223 QADLKGPLVIVMGAEGKGISPLTKRMCDFCVRIPMRGKVSSLNVSVAAALLMYEAVRQRN 282 >UniRef50_A9BJB6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Thermotogaceae RepID=A9BJB6_PETMO Length = 240 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 86/239 (35%), Positives = 138/239 (57%), Gaps = 4/239 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 IYG + ++ ++E F E L ++ + + G + + L++ + Sbjct: 2 YIYGKNILKEIIEARYPVKHIFFSSSKTERGSLKEIVEDVANLGYSYSFSPNEVLEKMAL 61 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGI+ + +Y+ D+I ++ FL+ILD + DPHN GA +R++ AAGV A Sbjct: 62 TNKHQGIVIDIGNDFKYEN---LDIIEGKEKLFLVILDQIQDPHNFGAIVRTSVAAGVDA 118 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I+PKD + ++ KV+ G +P+I+VTNL+ T+ L++EN+W+ G E Y Sbjct: 119 IIIPKDNAVEVTPVVIKVSSGQIFKIPIIKVTNLSNTIETLKKENVWVYGADVEG-KPYY 177 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + G++ LV G EG G+R+ + HCDEL+SIPM +V SLNVSV++GI LFEA +QR Sbjct: 178 EIDWQGKICLVFGNEGNGIRKNVKNHCDELVSIPMFNNVESLNVSVSSGIILFEAKKQR 236 >UniRef50_B8FEV3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEV3_DESAA Length = 249 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 82/241 (34%), Positives = 139/241 (57%), Gaps = 2/241 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +E++YG+H V+ L +FQ V++ + R + ++ +G+ ++ ++ + + Sbjct: 3 TELLYGMHPVREALLAGKRQFQAVYVSESRTGEGKEDILSLARERGIEVKTPDQSFFKGQ 62 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 G QG+ ARV + L F L++D + DP N GA +R+A AGV Sbjct: 63 DRGG--QGVAARVSLFKPIALELLVKKAGGEQPLFFLLMDEINDPQNCGALMRTALCAGV 120 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 + VI+P RS+ L+ K + GA E +P+ RV NL R+M+ L+++ +W G A T Sbjct: 121 NGVIMPDKRSSPLSPAVSKASAGALEHMPVARVVNLVRSMQYLKDQGVWFFGLDARASGT 180 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 ++++ +TG A+V+G EG+G+R L R+ CD+L+SIP AG + SLN SVA + ++E +RQ Sbjct: 181 VWEADLTGPAAVVVGNEGKGLRPLVRKECDQLVSIPQAGPLGSLNASVAGALSMYEVMRQ 240 Query: 242 R 242 R Sbjct: 241 R 241 >UniRef50_A1HPG2 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPG2_9FIRM Length = 270 Score = 272 bits (698), Expect = 6e-72, Method: Composition-based stats. Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 5/239 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ GI V+ + K R+ + L ++G I + +D Sbjct: 32 VVEGIRLVEEAAGSTWRPAMCFYTEKAAAAPRVQATLEILAAKGCRIFPVADNVYAKITD 91 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI+ ++ R D + S D+ +++LD V DP N+G +R+ADAAG Sbjct: 92 TEQPQGILCVMEKKRYT-----FDDLQSSDRELIVVLDNVQDPGNVGTVVRTADAAGCCG 146 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VI+ K + + + G+ +P+I L+ + I ++ TA ++ + Sbjct: 147 VILTKGCADLFSGKTVRATMGSLFHLPVITGVAEQEVAAFLERQGIRLLATALDSSSLYH 206 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + +A+V G EG G+ ++ E DE + IP+ G SLNV+VA + L+EA RQR Sbjct: 207 DVDLRSPVAIVFGNEGAGVSKVILEKADERLYIPLYGRAESLNVAVAAAVILYEARRQR 265 >UniRef50_B0P8C0 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0P8C0_9FIRM Length = 256 Score = 272 bits (698), Expect = 6e-72, Method: Composition-based stats. Identities = 90/243 (37%), Positives = 138/243 (56%), Gaps = 5/243 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKG--REDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++ G +AV LL+ P + ++I + + ++ + V ++ + + LD Sbjct: 14 LVLGRNAVIELLK-GPREVECIYICDDVPARGQPISRIVALAKEARVPVKRVDVRRLDTL 72 Query: 62 SDGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 ++G HQG+ A+ +L A + P L+I D + DPHNLGA +R+A+AAG Sbjct: 73 ANGLNHQGVAAQAAAFHYCTVEELFARAAARGEPPLLVIADSIEDPHNLGAIIRTAEAAG 132 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 H +I+PK A L A + + GA E +P+ RVTNL T++ L+ +WI G Sbjct: 133 AHGLIIPKRGGAGLTAIVGRTSAGAVEHLPVARVTNLVSTIKELKARGVWIYGADASGAR 192 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 Q+ +TG ALV+G+EG G+ RL RE CD L+S+PM G V+SLN SVA GI ++EAVR Sbjct: 193 -WDQTDLTGPSALVIGSEGFGLSRLVRETCDALLSLPMRGEVNSLNASVAAGILMYEAVR 251 Query: 241 QRS 243 QR+ Sbjct: 252 QRT 254 >UniRef50_A1AWI4 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Gammaproteobacteria RepID=A1AWI4_RUTMC Length = 247 Score = 272 bits (696), Expect = 9e-72, Method: Composition-based stats. Identities = 112/245 (45%), Positives = 158/245 (64%), Gaps = 3/245 (1%) Query: 1 MSE--MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 MS+ +I HAVQA L+ P F +VFIL R DKRL L + G+ +Q + L Sbjct: 1 MSKSIIITSFHAVQAQLKSNPTCFIKVFILNKRCDKRLNTLTSEFNNFGISVQRCTKIQL 60 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSAD 117 D+ S+ HQG+ A + + +L ++ LD F+LILD + DP NLGACLRSA+ Sbjct: 61 DKLSNHQTHQGVAAEILLPTLPDQGELISYVSKLDNAGFILILDSIQDPRNLGACLRSAN 120 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 AAGVH V++ K+ SA +N+ K + GA + + +VTNL+RT++ LQ++NIW++G G Sbjct: 121 AAGVHCVVINKNGSAPINSLVHKTSAGALNQLKIFQVTNLSRTIKALQQKNIWVIGLDGS 180 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 + ++YQ +T A++MGAEG G+RRLT++ CD+L IPM G V SLNVSVATG+ LFE Sbjct: 181 VNISIYQIDLTIPNAIIMGAEGSGLRRLTKQSCDQLAKIPMQGKVESLNVSVATGVTLFE 240 Query: 238 AVRQR 242 RQR Sbjct: 241 VNRQR 245 >UniRef50_Q724H1 RNA methyltransferase, TrmH family, group 3 n=21 Tax=Firmicutes RepID=Q724H1_LISMF Length = 251 Score = 272 bits (696), Expect = 9e-72, Method: Composition-based stats. Identities = 89/242 (36%), Positives = 139/242 (57%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E I G + V +L ++++ +G + L ++ + + + +Q +Q +++ Sbjct: 7 QEWIGGRNPVLEVLRSD-RDIHKIYVQEGSQKGVLKQVLTLAKERKIQVQFVPKQKIEKV 65 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNLGACLRSADAAG 120 GA HQG+ A+V + + +DL + D+ PF +ILD + DPHNLG+ +R+AD+ G Sbjct: 66 VSGA-HQGVAAQVAAYQYAELDDLFAAAEAKDEMPFFIILDELEDPHNLGSIMRTADSVG 124 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 H +I+PK RS L T K + GA E VP++RVTN+ RTM LQ+ +WI GT + Sbjct: 125 AHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTNMVRTMEELQKRGLWIFGTDAKGSS 184 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + LA+V+G+EG GM L RE CD L+ +PM G V+SLN SVA + L+E R Sbjct: 185 DYRTMDVDMPLAIVIGSEGFGMSCLVREKCDFLVHLPMRGKVTSLNASVAASLLLYEVYR 244 Query: 241 QR 242 +R Sbjct: 245 KR 246 >UniRef50_A4J4Z3 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J4Z3_DESRM Length = 267 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 65/238 (27%), Positives = 117/238 (49%), Gaps = 4/238 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 + GI V+ L + ++ + + +R L+ +GV + + + E SD Sbjct: 30 VEGIRFVEEALSSTWQTEILLYTDQACQAQRGKILLDLARDKGVEVLAVSDAIMKELSDT 89 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAV 124 QG++A ++ L D+I +P ++I+DGV DP NLG +RSADAAG V Sbjct: 90 ETPQGMLAVLRQPDYT----LEDIIRPDQKPLVVIVDGVQDPGNLGTIIRSADAAGASGV 145 Query: 125 IVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQ 184 I+ K N + G+ +P+I+V+++ + L + ++ +++ Sbjct: 146 ILLKGTVDIYNPKTLRATMGSLFHLPVIQVSDVNEALEYLASIGVTLLVGEPAGGIPVFK 205 Query: 185 SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + + +++ EG G R + + I+IPM G SLNV++AT I L+EA+RQR Sbjct: 206 ANLQTPVGIIVANEGAGPREEIFRYNHQKITIPMPGCAESLNVAIATSIILYEAIRQR 263 >UniRef50_Q6FF50 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=19 Tax=Moraxellaceae RepID=RLMB_ACIAD Length = 248 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 116/242 (47%), Positives = 161/242 (66%), Gaps = 2/242 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E YG+H+V++LLE PER +F LKGR+D+RL ++ E G+ +Q A+R L++ + Sbjct: 5 EYYYGVHSVESLLELEPERVLTLFTLKGRDDQRLQKILELAEPFGISVQKASRDSLEKLA 64 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG++A V+P E DL L+ + DQ LL LD VTDPHNLGAC+R+A A G+ Sbjct: 65 GLPFHQGVVAAVRPHPVLNEKDLDQLLQNNDQALLLALDQVTDPHNLGACIRTAAAMGIA 124 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI-WIVGTAG-EADH 180 AVIVP+DRSA L TA+KVA G AE V I+VTNLART+ ++ +VGT E Sbjct: 125 AVIVPRDRSASLTPTARKVAAGGAEKVKFIQVTNLARTLAHIKAHFFVKVVGTMLDEKAL 184 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + + +G +A+VMGAE G+R +T+ CD+ + IPM+G++ SLNVSVA G+ L+EA R Sbjct: 185 PIQKYDFSGNVAIVMGAEDTGLRPITQSQCDQTVYIPMSGNLQSLNVSVAAGMALYEACR 244 Query: 241 QR 242 QR Sbjct: 245 QR 246 >UniRef50_B3QM30 RNA methyltransferase, TrmH family, group 3 n=12 Tax=Chlorobiaceae RepID=B3QM30_CHLP8 Length = 257 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 81/241 (33%), Positives = 132/241 (54%), Gaps = 1/241 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +++YG +AV LL+ PE +++++ +L ++ + A + L Sbjct: 16 EQVVYGRNAVIELLQSKPESVEKIYLQFNTSHPKLKEIVITARRLKIPCGKARMEKLTLI 75 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 S A +QG+ A + Y +++ P L+IL G+ DPHN+GA +R+A+A Sbjct: 76 SGTAKNQGVCALLTSVTFYTLDEVLA-APRNSSPLLVILQGLEDPHNVGAIIRTAEAVAA 134 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +VI+ + + A ++AT K + GA + + +V +L +T+ +L E IV EA+H Sbjct: 135 DSVIMIEGKGAPISATVHKASAGALSHMRVCKVKSLVKTLDLLHERGFSIVAADMEAEHN 194 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 LVMGAEG+G+ TR+ CD+++ IPMAG V SLNVSVA G+ L+EA+RQ Sbjct: 195 HTDIDWKRPTVLVMGAEGKGLGSETRKRCDQIVRIPMAGCVESLNVSVAAGVMLYEAMRQ 254 Query: 242 R 242 R Sbjct: 255 R 255 >UniRef50_B4WGA5 RNA methyltransferase, TrmH family, group 3, putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WGA5_9SYNE Length = 365 Score = 270 bits (692), Expect = 3e-71, Method: Composition-based stats. Identities = 86/241 (35%), Positives = 136/241 (56%), Gaps = 3/241 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFI-LKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++IYG HAV+A +E +++ K D PLI ++ G V+ L + Sbjct: 97 DLIYGRHAVEAAIEAG-RSLNRLWVNAKLHYDSHFRPLIATAKANGSVVDEVENVRLSQM 155 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSADAAG 120 + GA HQGI+A+V L + +P ++ DG+TDPHNLGA +RSA+A G Sbjct: 156 TQGASHQGIVAQVSAYEYVDLEVLVQQAKNKARRPVIVAADGITDPHNLGAIIRSAEAIG 215 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +++P+ R+ + +T KV+ GA E++P+ RV NL R + L+ + WI G EA Sbjct: 216 AQGIVIPQRRAVGVTSTVAKVSAGALENIPIARVINLGRALEYLKSNSFWIYGLTAEAAQ 275 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +++ + + + LV+GAEG G+ + CD+L+SI ++G SLN SVATG+ L+E R Sbjct: 276 SIHTTDFSAPVVLVVGAEGSGLSLSVQNLCDQLVSIELSGKTPSLNASVATGMALYEIYR 335 Query: 241 Q 241 Q Sbjct: 336 Q 336 >UniRef50_Q1LSR1 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Gammaproteobacteria RepID=Q1LSR1_BAUCH Length = 248 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 152/245 (62%), Positives = 197/245 (80%), Gaps = 3/245 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M+E+IYGIHAVQA+L+R P+ F+EV++L+ R D+R +I L+ + ++I++ NRQ+LD Sbjct: 1 MNEIIYGIHAVQAILKRDPQLFKEVYLLERRNDQRFQCIIKQLKQKKIIIKIVNRQWLDM 60 Query: 61 KSDGAVHQGIIARVKP-GRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 + GA HQGIIARV+ RQ+QE DLP L+A P LL+LDGVTDPHNLGACLR ADAA Sbjct: 61 QVKGATHQGIIARVQTNRRQFQEQDLPALLAQHTAPLLLVLDGVTDPHNLGACLRCADAA 120 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 GV+A+I+P++RSA LNAT KKVA GAAE++PLI+VTNLART+R+LQE NI I+GT EAD Sbjct: 121 GVNAIIIPRNRSAYLNATVKKVASGAAETMPLIQVTNLARTLRLLQEHNILILGTTIEAD 180 Query: 180 HTLYQ--SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 +YQ K T +ALV+GAEG G+RRLT+++C+EL+ IPM GSV+SLNVSVA G+ LFE Sbjct: 181 SHIYQTSFKFTSPIALVVGAEGNGIRRLTKKYCNELLRIPMVGSVASLNVSVAVGVFLFE 240 Query: 238 AVRQR 242 VRQR Sbjct: 241 VVRQR 245 >UniRef50_C4V0H0 tRNA/rRNA methyltransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0H0_9FIRM Length = 272 Score = 270 bits (691), Expect = 4e-71, Method: Composition-based stats. Identities = 89/241 (36%), Positives = 133/241 (55%), Gaps = 3/241 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK-S 62 ++ G HA+ ++ + + G + L G+++ R LD S Sbjct: 27 ILAGRHAIIEAIKAG-RGINRILLADGVRGSGVNELRDLAREHGIMVDTVGRSKLDALVS 85 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 HQG +A V P ++ A + P LL+LDG+ DP NLGA LR+ADAAGV Sbjct: 86 QDVRHQGAVAYVAPVAYVAVEEVIAGARARGEDPLLLLLDGIEDPQNLGALLRTADAAGV 145 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 H +++P+ S L T +V+ GA E VP+ R+ N+A+T+R L+E+ WI G + Sbjct: 146 HGILLPRRHSVPLTETVARVSAGALEYVPVARIGNIAQTIRALKEQGFWIAGADMGGEEI 205 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 ++ +TG L LV+G+EG GM RLTR+ CD + +PM G ++SLN SVA I ++EA RQ Sbjct: 206 YDRANLTGALVLVIGSEGRGMSRLTRDLCDFTVRLPMMGKINSLNASVAGAILMYEAQRQ 265 Query: 242 R 242 R Sbjct: 266 R 266 >UniRef50_B1X411 tRNA/rRNA methyltransferase (SpoU):RNA methyltransferase TrmH n=1 Tax=Paulinella chromatophora RepID=B1X411_PAUCH Length = 526 Score = 269 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 86/242 (35%), Positives = 141/242 (58%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLDE 60 ++I+G H+ QA LE ++ + + L L+ +++ V+++ + L + Sbjct: 190 KDLIWGRHSTQAALESG-RPIHRIWCTSEVKSSSKFLQLLKKVKASSVLVEEVSWARLGQ 248 Query: 61 KSDGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 G+ HQGI ++ L D + P L+ ++G+TDPHNLGA +RSA+A Sbjct: 249 LIGGSGHQGIALQMAAVETLDLTKLIEDCCHLGENPLLMAVEGLTDPHNLGAIVRSAEAL 308 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G H +I+P+ R+A L + KVA GA E +P+ RV NL R++ +L+++ IVG A E D Sbjct: 309 GAHGLILPQRRNAGLTGSVAKVAAGALEHLPVARVVNLNRSLDILKDKGYRIVGLATEGD 368 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 +L ++ + G L +V G+EG G+ LTR +CD+LI IP+ G+ SLN SVA+ + L+E Sbjct: 369 VSLTEADLNGPLVIVTGSEGNGLSLLTRRYCDQLIRIPLRGATPSLNASVASALMLYEVA 428 Query: 240 RQ 241 R+ Sbjct: 429 RR 430 >UniRef50_C8WTZ2 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTZ2_ALIAD Length = 255 Score = 269 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 96/241 (39%), Positives = 143/241 (59%), Gaps = 6/241 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +++ G HAV A LE +V++ +G + ++ S+GVV+Q R LDE + Sbjct: 21 DLVKGRHAVLAALES-ERPVNKVWVAEGASG--MDAIVAKARSRGVVVQFVPRSRLDEMA 77 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG+IA+V P +D+ + P +++LD + DPHN GA LR+A+A+G Sbjct: 78 S--AHQGVIAQVAPYAYVDLDDVIRR-DTGFAPLVVVLDEIADPHNFGAILRTAEASGAQ 134 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 V++ K R AQ+ K A GA E++P+ RV N+A+ ++ L++ WIVG EA Sbjct: 135 GVVIGKRRQAQVTDVVAKAAAGALETLPVARVANVAQALQRLKQAGYWIVGADVEAKVPY 194 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + G A+V+G+EG+GMRR RE CD L+SIP+ G V SLN SVA G+ L+EAVRQR Sbjct: 195 TEVDYRGPTAVVIGSEGQGMRRWVREQCDFLVSIPILGRVQSLNASVAAGVLLYEAVRQR 254 Query: 243 S 243 + Sbjct: 255 A 255 >UniRef50_D1VT15 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT15_9FIRM Length = 234 Score = 269 bits (689), Expect = 7e-71, Method: Composition-based stats. Identities = 74/240 (30%), Positives = 122/240 (50%), Gaps = 6/240 (2%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS IYG V L+ ++++ + ++ + + + V+I ++ LD+ Sbjct: 1 MS-YIYGRGPVIEALKNNK--VDKIYLAS--HEGSIIKIKAMAKEKKVLISSLSKDRLDK 55 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + G HQG++A V +L D + LLILD + DPHNLGA RSA Sbjct: 56 MAPGKNHQGVVALVSGYEYKDFQELLDENKDKKEFRLLILDKMEDPHNLGAIARSALFFN 115 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +I+PK R A +N T K + GA ++V + +VTNL++T+ L++ WI E D Sbjct: 116 FDGIIIPKHREALVNDTVYKTSQGAVDNVNICQVTNLSQTIEKLKKAGFWIYAALLEGD- 174 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + +G++A+++G EG+G+ + D + IP SLN SVA GI ++E +R Sbjct: 175 NIKDVDFSGKVAIIIGNEGKGISDNLIKASDFKVKIPNLSEFDSLNASVAAGIIMYEVIR 234 >UniRef50_B8I1W5 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Clostridium RepID=B8I1W5_CLOCE Length = 269 Score = 269 bits (688), Expect = 7e-71, Method: Composition-based stats. Identities = 64/242 (26%), Positives = 115/242 (47%), Gaps = 8/242 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRED-KRLLPLIHALESQGVVIQLANRQYLDEK 61 + GI V ++ + ++ I + E LI ++ I L + E Sbjct: 30 YFVEGIRFVSDAIDNG-QSIAKIIISEKLEGLNGGSELIEKVKGACSDISLVPEKIFREV 88 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 SD QGI+A +K + + + + + ++ILD + DP N G +R+ADAAG+ Sbjct: 89 SDTQTPQGILAVIKKNKYSFDKVITEGSS------VVILDCLQDPGNAGTIIRTADAAGI 142 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AV++ K + + G+ +P+ N+ +R+L++ + ++ + + Sbjct: 143 SAVLMSKGCVDLYSPKVLRSTMGSVFHIPIFEGLNITEIIRVLKQNDYKVIASHLSGKNN 202 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +Q +TGR A+++G E G+ T D L+ IPM G SLN SVA + ++E VRQ Sbjct: 203 YFQEDLTGRSAIIVGNEANGISDETAYMADSLVKIPMPGKAESLNASVAASVMIYEIVRQ 262 Query: 242 RS 243 +S Sbjct: 263 KS 264 >UniRef50_Q87D65 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=49 Tax=cellular organisms RepID=RLMB_XYLFT Length = 249 Score = 269 bits (688), Expect = 8e-71, Method: Composition-based stats. Identities = 122/243 (50%), Positives = 166/243 (68%), Gaps = 1/243 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++ I GI+AV + +E E +EV + ++ RLL + +G+ ++ Q LD Sbjct: 5 NQWIVGINAVVSSIENDAEHVREVLVEAASKNSRLLDIEENARRKGIEVRRVTTQALDGV 64 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 G HQG+ AR R ++E+DL DL+ A+ Q LL+LDGV DPHNLGACLRSA AAG Sbjct: 65 GGGVRHQGVAARYAAVRLWEEHDLKDLVDAAGGQALLLVLDGVQDPHNLGACLRSAAAAG 124 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V AVI+PKD+S +NAT +K + GAA+ +P+I V NLAR++R LQ++++WI G AGE + Sbjct: 125 VTAVIIPKDKSVGINATVRKTSSGAADRLPVIAVVNLARSLRELQKQDVWIYGLAGEVET 184 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +LY + G +ALV+G E +G+RRLTREHCD L IPM G V SLNVSVA G+ LFEAVR Sbjct: 185 SLYALDLRGNVALVLGGEADGLRRLTREHCDVLARIPMPGEVESLNVSVAAGVTLFEAVR 244 Query: 241 QRS 243 QR+ Sbjct: 245 QRT 247 >UniRef50_Q31FJ2 RNA methyltransferase TrmH, group 3 n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FJ2_THICR Length = 244 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 114/238 (47%), Positives = 156/238 (65%), Gaps = 2/238 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 +YGIHA++ L+++P + KG +KR+ L+ + G+ QL + + ++ Sbjct: 6 LYGIHAIEKFLKQSPHLIYSLTFQKGPVNKRVQSLMDQAKRMGIAYQLEPKSFFNKLEG- 64 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAV 124 VHQG++A V E DL L+ + P L LD V DPHNLGA LR+ADA GV AV Sbjct: 65 -VHQGVVATVAKEADLNETDLKALLEAESNPLFLFLDEVQDPHNLGAILRTADATGVTAV 123 Query: 125 IVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQ 184 ++PK S +NAT +KVACGAAE+V ++ V+NL RT++ LQ+ +W+ G AGE + TLYQ Sbjct: 124 VIPKHNSVGVNATVRKVACGAAETVKVVVVSNLVRTIKELQQAGLWVTGLAGETNTTLYQ 183 Query: 185 SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 G + LVMGAEG G+R+LTRE CD L +IPMAGS+ SLNVSVATG+ L+E RQR Sbjct: 184 LDFKGAVGLVMGAEGSGLRKLTRETCDHLAAIPMAGSIESLNVSVATGVVLYEVYRQR 241 >UniRef50_C5CF29 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Thermotogaceae RepID=C5CF29_KOSOT Length = 250 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 125/241 (51%), Gaps = 4/241 (1%) Query: 4 MIYGIHAVQALLERAPERFQE---VFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 ++G + ++ +L+ P++ + +F + D+ L L +G +++ + L Sbjct: 2 YLHGRNVLREILKLEPKKLKIKKVLFTDQKNVDRELEELKEHTAKKGYRMEVVPPEKLFN 61 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 S HQG++ +K L D I + L++LD + DPHNLGA +RS+ AAG Sbjct: 62 LSREKKHQGVVINLKEFPYTSLETLLDKIMEKKRSLLVLLDRIQDPHNLGAIIRSSVAAG 121 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VI+ + S ++ KV+ G +P++RV N+ART+ L+EE W E + Sbjct: 122 ADGVIITEKASVEVTPAVVKVSTGLVFRIPIVRVVNMARTIETLKEEGFWTYAATMEGE- 180 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 Y T + AL+ G EG+G+R L ++ D L+SIPM + SLNV+ + I LFE R Sbjct: 181 PYYSVSFTDKAALIFGNEGKGIRHLVKKKSDYLVSIPMCEGIDSLNVAASAAIMLFEYRR 240 Query: 241 Q 241 Q Sbjct: 241 Q 241 >UniRef50_Q0EVP7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EVP7_9PROT Length = 247 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 105/246 (42%), Positives = 148/246 (60%), Gaps = 6/246 (2%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS ++ GIHAV+ L+ + E+ I KG+ RL LIH + + ++ L Sbjct: 1 MS-VLAGIHAVKHALDAG-DSIDELLIEKGKHHPRLNELIHLAKKHSIRFSFVPKEALAR 58 Query: 61 KSDGAVHQGIIAR---VKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSAD 117 ++G HQG++A+ + P +L+LD VTDPHNLGAC+R+A+ Sbjct: 59 LAEGVPHQGVVAKMVAAGAQAVPTFEAWLKTVDMETAPMVLLLDQVTDPHNLGACVRTAE 118 Query: 118 AAGVHAVIVPKDRS-AQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 AAG AVIV KD + + K ACGA +P++RV N+ R + LQ++ W VG AG Sbjct: 119 AAGCAAVIVLKDHAADVHSPVVAKAACGALSRLPVLRVINMKRCIEQLQQQGFWTVGLAG 178 Query: 177 EADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 EA+ ++Y +K++G A+VMG+E +G+RRL RE CD+LI IPM G V SLNVSVATG+ LF Sbjct: 179 EAELSIYDAKLSGATAVVMGSEDKGVRRLVRETCDQLIHIPMPGVVESLNVSVATGVALF 238 Query: 237 EAVRQR 242 E RQR Sbjct: 239 EINRQR 244 >UniRef50_B1C951 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C951_9FIRM Length = 242 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 90/245 (36%), Positives = 135/245 (55%), Gaps = 6/245 (2%) Query: 1 MSEM--IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 MS + G +AV+ L+ +++I + D L+ +I +S+G+ IQ N L Sbjct: 1 MSNYEKVIGRNAVRETLKAG-RNVNKLYISEN-HDSGLVSIIKMAKSKGISIQKTNNHKL 58 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSAD 117 D S HQG++A P +L + + + +P ++ILD +TDPHN GA +RSA Sbjct: 59 DSMSGSTHHQGVLALCSPVETISLRELIEKMNEKVTKPLVVILDNITDPHNAGAIIRSAY 118 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 AG VI+ RSA + K + GA E + L V+N+A+T+ L++E +++VG Sbjct: 119 CAGADGVIMQTRRSASIGEGMYKSSAGAIEHIDLCEVSNIAQTIDTLKKEGLFVVGLDMN 178 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 + Y LALV+GAEG+G+ RL +E CD + SIP+ SLN SVA GI LFE Sbjct: 179 GE-NYYDMDYDMPLALVVGAEGKGLGRLIKEKCDFISSIPLKNDFDSLNASVAAGIVLFE 237 Query: 238 AVRQR 242 AV+ R Sbjct: 238 AVKTR 242 >UniRef50_A6CBV4 YacO n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBV4_9PLAN Length = 261 Score = 266 bits (681), Expect = 5e-70, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 2/240 (0%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 I+G +AV+ L E+ + + + + L + + ++ + L +K Sbjct: 22 WIWGRNAVRETLFAGFWPMYELHLSDHLKSEEIEQLEQQAARSTIPVFISTDKELTQKCR 81 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 + HQG+IA++ P + P LILD + DP N GA +RSA+ G Sbjct: 82 ASDHQGMIAKMAPFPYTSIELFNQ--QEITSPLFLILDRIQDPFNFGAIIRSAEIMGADG 139 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 + ++ + + + GA VPL++ T+L R ++ I IVGTA +A L Sbjct: 140 IFSGTHEQCEVTSLVCRTSAGAVNHVPLVQATDLVSLCRDWKQNGINIVGTAMQASEKLN 199 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 A+++G EG G+ + C L+ IP G SLNV+V+ I L+EA RQR+ Sbjct: 200 DYNFQQPTAVIVGNEGTGISPELQAECTHLVRIPQQGKTESLNVAVSASILLYEASRQRN 259 >UniRef50_A1WUS8 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Proteobacteria RepID=A1WUS8_HALHL Length = 271 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 116/239 (48%), Positives = 160/239 (66%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG HA + P + V++ GR D RL L+ L QGV ++ +R+ LD+ ++ Sbjct: 25 LVYGQHAAREAAAYDPAGVEAVWVEHGRRDARLERLLDKLGRQGVTVERVHRRVLDQMAE 84 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G HQGI+ R E +L DL+ + +P LL+LD V DPHNLGAC+RSA AAG H Sbjct: 85 GGNHQGIVLRYSGTPARGEGELADLVDAEPEPLLLVLDRVQDPHNLGACMRSAAAAGAHG 144 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V+ P+DR+A L+ K A GA + +P +VTNLART++ L++ + +VG AGEA+ + Y Sbjct: 145 VVAPRDRAAALSPAVHKTAAGAVQRIPFFQVTNLARTLQQLRDAGVHVVGAAGEAEKSCY 204 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + G LALV+G EGEG+RRLTRE CDE ++IPM GS+ SLNVSVA G+ LFEAVRQR Sbjct: 205 EVDLRGPLALVLGGEGEGLRRLTRERCDERVAIPMPGSMESLNVSVAAGVLLFEAVRQR 263 >UniRef50_C7H0N3 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0N3_9FIRM Length = 297 Score = 265 bits (680), Expect = 8e-70, Method: Composition-based stats. Identities = 77/243 (31%), Positives = 127/243 (52%), Gaps = 3/243 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +YG + V+ L + + ++++ ++ K + S+G+ + + + E Sbjct: 55 KFFVYGRNIVEEALIHSAKYIEKIYFSSKKK-KNQKGIEDLAISKGLRPEYIDDDEIAEF 113 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIA-SLDQPFLLILDGVTDPHNLGACLRSADAAG 120 QG IA +D L ++P +L+LD + DP NLGA +R+A AG Sbjct: 114 ISENDAQGCIAVFNKFAYRDIDDALRLADIRGEKPLVLVLDRIEDPRNLGAIIRTARCAG 173 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VH +I+ KDR+A + T KV+ GA S+P I VTNLA ++ L++ W+ D Sbjct: 174 VHGIIIAKDRAAGITPTVAKVSEGAIFSIPCIMVTNLAAALKDLKQRGFWVYAADANGD- 232 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + ++ + G +ALV+G EG+G+ +L D +SIPM SLNVSVA GI ++E VR Sbjct: 233 SCFEQEFGGSVALVLGNEGKGISKLCLNESDYKVSIPMVNDFDSLNVSVAAGILMYEIVR 292 Query: 241 QRS 243 + + Sbjct: 293 KNN 295 >UniRef50_A4GI27 rRNA methyltransferase n=1 Tax=uncultured marine bacterium EB0_41B09 RepID=A4GI27_9BACT Length = 246 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 114/241 (47%), Positives = 154/241 (63%), Gaps = 3/241 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 IYG H++ + + P +E+FI + R D R+ L+ +++ V L+ + LD G Sbjct: 7 IYGFHSITSQIRLDPLVVKEIFIDEARSDGRVNDLMKIIKANEVKFHLSTKDRLDGMVSG 66 Query: 65 AVHQGIIARVKPGR--QYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG++A V+ + D+ + LILDGV DP NLGAC R ADA GV Sbjct: 67 NKHQGVVALVREAQNKYVTVEDIIEENYDK-PLLFLILDGVVDPQNLGACFRVADAMGVD 125 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+I PKD + LNAT +KVACG AESVP + VTNLART+R L+ N+++ GT A+ +L Sbjct: 126 ALICPKDNAVGLNATVRKVACGGAESVPFVVVTNLARTIRYLKNSNVFVYGTDDNANKSL 185 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++ G +ALVMG+EG+GMRRLT E CD++ SIPM G V SLNVSVA+GICL+E RQR Sbjct: 186 QKTNFKGSIALVMGSEGKGMRRLTNELCDDIFSIPMMGQVESLNVSVASGICLYEINRQR 245 Query: 243 S 243 S Sbjct: 246 S 246 >UniRef50_B9ZJH8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJH8_9GAMM Length = 251 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 118/236 (50%), Positives = 152/236 (64%), Gaps = 1/236 (0%) Query: 7 GIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAV 66 GIHAV A+L+ APER + + + G + L L+ +++G+ ++ A R LD+ G Sbjct: 15 GIHAVAAVLQHAPERVRLLQLASGTLEPALAQLLEQAQARGISVERAGRDKLDQHHPGFQ 74 Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 HQG+I P +E L + + +L+LDGVTDPHNLGACLR+ADAAG A++ Sbjct: 75 HQGVIVHCAPRPVVEEKALVQRVRNG-LDLVLVLDGVTDPHNLGACLRTADAAGAGAIVT 133 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 P+ SA L A KVA GAAE+VP++ V NLART+ L++ +W VG G A LY Sbjct: 134 PRHHSAALTPAAIKVASGAAETVPVVAVGNLARTLAALKDAGMWTVGLDGAAHEDLYAVD 193 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + A+VMGAEGEGMRRLTRE CD L IPM G+V SLNVSVATGI LFEA RQR Sbjct: 194 LRPPTAIVMGAEGEGMRRLTREACDHLARIPMGGTVESLNVSVATGITLFEARRQR 249 >UniRef50_A6L4B5 tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A6L4B5_BACV8 Length = 255 Score = 265 bits (679), Expect = 9e-70, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 125/242 (51%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +EMI+G+ AV ++ +V + K + + L L++ + +Q + ++ Sbjct: 5 NEMIFGVRAVIEAIQAG-REIDKVLVKKDIQSELSKELFACLKNTLIPVQRVPVERINRI 63 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + HQG++A + + DL + P ++LDG+TD N GA R+ + AG Sbjct: 64 TR-KNHQGVVAFISSVTYQKTEDLVPFLFEEGKTPLFVMLDGITDVRNFGAIARTCECAG 122 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 A+I+P S +NA A K + GA ++P+ R NL T++ L++ IV + D+ Sbjct: 123 ADAIIIPSKNSVSVNADAMKTSAGALHTLPVCREQNLTNTIKYLKDCGFKIVAATEKGDY 182 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++ + ++MGAE G+ CDE I IP+ G + SLNVSVA GI ++EAV+ Sbjct: 183 DYTKANYKDPVCIIMGAEDTGVPYEHLSLCDEWIKIPLMGKIESLNVSVAAGILIYEAVK 242 Query: 241 QR 242 QR Sbjct: 243 QR 244 >UniRef50_B5EQA2 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Acidithiobacillus RepID=B5EQA2_ACIF5 Length = 255 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 114/242 (47%), Positives = 151/242 (62%), Gaps = 5/242 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 E +YGIHAV A L+ E E+++ + R D+R+ PL+ Q + +Q L Sbjct: 3 KESLYGIHAVSAALDA--EELLELWVAVERRADERIAPLVQKAAEQRLPVQEWRSVALGR 60 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 K + HQG+ ++ + + FLL+LDGV DPHNLGACLRSA+AAG Sbjct: 61 KLNTDRHQGVGGLLRAFPGQDFEAILAQL--NGCGFLLVLDGVLDPHNLGACLRSAEAAG 118 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V AVI+P+D + +NAT +K + G+A VP+ VTNL+RT+ LQE W+VG AGE Sbjct: 119 VDAVILPRDNACPVNATVRKASAGSASRVPVCTVTNLSRTLSSLQEAGFWLVGMAGEGSR 178 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +LY + L +VMG E +G+RRLTREHCD L IPM G++ SLNVSVATGICLFEA R Sbjct: 179 SLYALDLDMPLVMVMGGEEKGLRRLTREHCDYLAHIPMMGAIESLNVSVATGICLFEAAR 238 Query: 241 QR 242 QR Sbjct: 239 QR 240 >UniRef50_C2BF70 tRNA/rRNA methyltransferase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BF70_9FIRM Length = 239 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 81/239 (33%), Positives = 130/239 (54%), Gaps = 10/239 (4%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 + IYG V ++ + ++ I + K + +I L V I ++++ D+ Sbjct: 7 DKIYGRKPVIDAIDSGVKIYKAFVIKQN--SKIVEEIIAKLNKANVEINFVDKRFFDKI- 63 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG++ + DL L+ILD + DPHNLGA +RSA++ G Sbjct: 64 -ELNHQGVMVEAESFEYKDLRDLDKYQ------RLIILDQIEDPHNLGAIIRSAESFGFD 116 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 VI+P+ RSA ++ K + GA ++ +I V N R + ++E W+ G AGEA + Sbjct: 117 GVIIPERRSASVSPIVYKTSAGAINNINIIMVKNTNRAIEEIKEAGFWVYGLAGEASSPI 176 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 Q + G++ L++G EG+G+ RL RE+CD LI+IPM G V+SLN SVA+ I ++E +RQ Sbjct: 177 DQVDLKGKVCLIVGNEGKGLSRLVRENCDILINIPMKGFVNSLNASVASAIAMYEVLRQ 235 >UniRef50_Q1IWR8 RNA methyltransferase TrmH, group 3 n=6 Tax=Deinococci RepID=Q1IWR8_DEIGD Length = 246 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 94/240 (39%), Positives = 140/240 (58%), Gaps = 7/240 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG + V L EV + +G E + +L++ V ++ A R LD+ + Sbjct: 2 LLYGRNPVLEALRDGR--VTEVLVARGVE----EAFVRSLKAFDVRLRFAPRIELDQLAG 55 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPF-LLILDGVTDPHNLGACLRSADAAGVH 122 HQG+IA V+ +D+ D + + +++LDG+TDP N GA +RSA+ G H Sbjct: 56 TTQHQGVIAEVEDLAWATVDDILDRAEARGEDLLIVLLDGITDPRNFGAIIRSAEVLGAH 115 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 V+V + RSA L+ K A GA +P+ + NL R + L+E+ +WI G AGEA + Sbjct: 116 GVVVEERRSAPLSPVVVKTAAGATSYLPVAQTKNLPRLIDALKEDGVWIYGAAGEAAQDI 175 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++ ++G++ALV+GAEGEG+RRL RE CD L+ IP G V SLN SVA GI L+EA R R Sbjct: 176 GRTDLSGKVALVIGAEGEGLRRLVREKCDALVRIPTRGQVQSLNASVAAGILLYEAARAR 235 >UniRef50_Q7VQP0 23S rRNA (guanosine-2'-O-)-methyltransferase rlmB n=2 Tax=Candidatus Blochmannia RepID=RLMB_BLOFL Length = 254 Score = 264 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 123/244 (50%), Positives = 174/244 (71%), Gaps = 2/244 (0%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MSE++YGIH V++++ ++P R V+I+ D RL LI+ + + IQ R+ L+ Sbjct: 1 MSELVYGIHTVESIVNQSPNRILIVYIVSNPRDLRLKSLIYRIRKMNINIQECTRRVLNI 60 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ--PFLLILDGVTDPHNLGACLRSADA 118 KS + HQGIIA V P E+ L + + + P LL+LDG+TDPHNLGAC+RSADA Sbjct: 61 KSMKSAHQGIIAEVIPMPALNEDYLLHFLKTKNNIIPLLLVLDGITDPHNLGACIRSADA 120 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AGVH +IVP+DRSA +NAT +KVA G+++ VP +RVTNL+RT+++L++ NI+IVG+ + Sbjct: 121 AGVHMIIVPRDRSANVNATVRKVASGSSDRVPFVRVTNLSRTLKLLKKYNIYIVGSVLRS 180 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + L+ +++ +ALVMG+E G+RRLTRE+CD+L+ IP S SLNVSVATGI LFE Sbjct: 181 NQILFNTRLIDPIALVMGSESSGIRRLTRENCDKLVHIPTLQSTVSLNVSVATGIFLFET 240 Query: 239 VRQR 242 VRQR Sbjct: 241 VRQR 244 >UniRef50_D1AP92 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Fusobacteriaceae RepID=D1AP92_SEBTE Length = 234 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 76/243 (31%), Positives = 133/243 (54%), Gaps = 10/243 (4%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M ++I G++AV+ L+ + +++ I KG R+ ++ + + I +++ Sbjct: 1 MEKII-GLNAVREALD-GSKNIEKIEIYKGTNKDRIRDILSKASKKNIKIFYTDKRQ--- 55 Query: 61 KSDGAVHQGIIARVKPGRQY-QENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 QGI A V Y + N+ + + + + +L+LD + DP N GA +RSA+ Sbjct: 56 ----ENSQGIAALVSEYDYYLELNEFLEKVLAKQRSIVLVLDQIQDPRNFGAIIRSAECF 111 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 GV +I+ S + T K + GA E V +I+VTN++ +M L++ +I G + + Sbjct: 112 GVDGIIIQDRNSVSVTETVVKSSTGAIEHVDIIKVTNVSDSMDKLKKYGYFIYGAEADGE 171 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 Y +L LV+G+EG+GMR+ +EHCD++++IPM G ++SLNVSVA GI L E Sbjct: 172 TEYYNEPFPEKLCLVLGSEGKGMRKKVKEHCDKILNIPMHGKINSLNVSVANGILLAEIS 231 Query: 240 RQR 242 + + Sbjct: 232 KNK 234 >UniRef50_A7B5E9 Putative uncharacterized protein n=7 Tax=Bacteria RepID=A7B5E9_RUMGN Length = 275 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 66/245 (26%), Positives = 105/245 (42%), Gaps = 16/245 (6%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVI--------QLANRQY 57 GI V+ ER ++ + E K ++ + + + ++ + Sbjct: 37 EGIRMVRE---TPHERLVGLYFSESFEKKYGKEVLDVISGGDLKVREQIRKKTEILSDAV 93 Query: 58 LDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSAD 117 SD QG++A V + P L+ILD + DP NLG R+A+ Sbjct: 94 FSYVSDTKTPQGVLAVVHQMEYT-----LGQMTEGAIPHLMILDNLQDPGNLGTIFRTAE 148 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 AAGV +I+ +D N + GA +P + V +L T+ L+E+NI + Sbjct: 149 AAGVTGIIMSRDCVDIYNPKTIRSTMGALYRMPFVYVEDLRETIHTLKEKNIKSYAAHLD 208 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 +T + A ++G EG G+R + D I IPM G V SLN +VA + +FE Sbjct: 209 GKNTYDKEDYRQGTAFLIGNEGNGLREEIAQCADTWIRIPMCGQVESLNAAVAATVLMFE 268 Query: 238 AVRQR 242 RQR Sbjct: 269 VSRQR 273 >UniRef50_C6X1H8 rRNA methylase n=4 Tax=Bacteroidetes RepID=C6X1H8_FLAB3 Length = 265 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 76/241 (31%), Positives = 119/241 (49%), Gaps = 3/241 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 + I+G+ V +E ++F+ + L L + + L+ + Sbjct: 22 DFIFGLRPVIEAIEAGK-TIDKIFMQNALQGDIYYELKTLLSKHNIRPNYVPIEKLNRFT 80 Query: 63 DGAVHQGIIARVKPGRQYQEND-LPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 HQG++A + D LP L PFLLILD +TD N GA R+A+ GV Sbjct: 81 R-KNHQGVVAFISDVPFESIQDVLPQLFEEGKTPFLLILDRLTDVRNFGAICRTAECVGV 139 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 HA+I+P+ +A +N+ A K + GA ++ + + NLA + LQ+ + + + +A Sbjct: 140 HAIILPEKGAAPINSDAIKTSAGAIYNLRICKEKNLAHAVDFLQQSGLQVFSASEKAQKL 199 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +Y T A+VMG E G+ + H DE I +P+ G SLNVSVA G L+EAVRQ Sbjct: 200 IYDVDFTQPCAIVMGNEETGISKEVLHHSDEKIKLPIEGKTQSLNVSVACGAILYEAVRQ 259 Query: 242 R 242 + Sbjct: 260 K 260 >UniRef50_B5YF75 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Dictyoglomus RepID=B5YF75_DICT6 Length = 241 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 79/240 (32%), Positives = 137/240 (57%), Gaps = 5/240 (2%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLD 59 M + IYG +AV L+ +++I KG D + +++ + +GV I+ R ++ Sbjct: 1 MEDKIYGKNAVLEALKSNI-PLNKIYIAKGIHFDNKFNEILNLAKEKGVPIKYVERSVIE 59 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 + G QG++A + + D+ + + +++LD + DPHNLGA R+++ A Sbjct: 60 KMVGG-NSQGVLAIISSVPYREWEDIEKTLNNK--SVIVVLDHIQDPHNLGAIARTSEFA 116 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G A+++PK RSA + + + K + GA +P++RV+N+A +R L+++ +IVG + + Sbjct: 117 GASAIVIPKARSAGVTSASFKASAGALSYIPVVRVSNIANFLRELKKKGWFIVGADLDTE 176 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + Q LALV+G+E EG+ R+ +E CD L+ IP G V SLNVSVA GI L++ Sbjct: 177 NLYNQVNYRFPLALVVGSEDEGLHRIVKESCDLLVKIPSYGKVESLNVSVALGIILYKIR 236 >UniRef50_Q7TU91 tRNA/rRNA methyltransferase n=3 Tax=Prochlorococcus marinus RepID=Q7TU91_PROMP Length = 428 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 83/236 (35%), Positives = 128/236 (54%), Gaps = 3/236 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGR-EDKRLLPLIHALESQGVVIQLANRQYLDE 60 + I+G H+V A L + ++ ++ L+ L+S+GV+I+ L + Sbjct: 188 EDWIWGKHSVFAAL-NSERPINRIWCTSEIFSSEKFYLLLKDLKSKGVLIEEVPWSRLSQ 246 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRSADAA 119 + GAVHQG+ + L D+ S P ++ LDGVTDPHN GA +RSA+A Sbjct: 247 LTSGAVHQGVALQHASTESISLEKLIDISKSKSSNPIIVALDGVTDPHNFGAIIRSAEAF 306 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 +IVP+ RSA L T KVA GA E +P+ RV NL R + L+++ I+G +G+ Sbjct: 307 DCKGIIVPQRRSAGLTGTVAKVAAGALEHIPVSRVVNLNRAIDELKKKGFIIIGLSGDGQ 366 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + + K + +++GAE +G+ L ++ CD L+ IP+ G SSLN SVA I L Sbjct: 367 VPISEFKEKAPVVVIVGAENKGISLLVQKKCDYLLKIPLKGKTSSLNASVAAAISL 422 >UniRef50_Q31LC0 RNA methyltransferase TrmH, group 3 n=22 Tax=Bacteria RepID=Q31LC0_SYNE7 Length = 519 Score = 262 bits (672), Expect = 6e-69, Method: Composition-based stats. Identities = 101/242 (41%), Positives = 150/242 (61%), Gaps = 3/242 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E+IYG HAV A L+ +++ + R + L LI A ++ G V+ + + + Sbjct: 242 ELIYGRHAVLAALQ-GNRTLNRIWVTPRLRYESTFLELIDAAKAGGAVVDEVPVERIRQL 300 Query: 62 SDGAVHQGIIARVKPGRQYQENDLP-DLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 +DGAVHQGI A+V P + +DL A+ P +++ DG+TDPHNLGA +R+A+A G Sbjct: 301 TDGAVHQGIAAQVAPYPYQELSDLIAQAKAATTDPVIVVADGITDPHNLGAIIRTAEALG 360 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 H +++P+ R+ + A KVA GA ES P+ RV NL R + L++ WI G AGEA Sbjct: 361 AHGLVIPQRRAVGVTAAVAKVAAGALESFPVARVVNLNRALEELKDAGFWIYGAAGEAKQ 420 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +++++ +G + LV+G+E EG+ LTRE CD LISIP+ G +SLN SVA G+ L+E R Sbjct: 421 SIHETSFSGPVVLVVGSEDEGLSLLTRERCDHLISIPLRGKTNSLNASVAAGMVLYEVSR 480 Query: 241 QR 242 QR Sbjct: 481 QR 482 >UniRef50_A7HLT3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Thermotogaceae RepID=A7HLT3_FERNB Length = 234 Score = 262 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 77/238 (32%), Positives = 133/238 (55%), Gaps = 9/238 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG + ++ +L + ++ DK L LI ++ + + +A + L + Sbjct: 2 IVYGRNVLKEILTSN-HPVKLIYFSDS-HDKELDKLIEQVKERKLPYTIAPKNVLKKLCG 59 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 +QG++ + + E+ LP+ PF+++LD V DP NLGA +R+A AAGV+ Sbjct: 60 EEKNQGVVIDIGDFQYADESYLPE------NPFIVLLDQVQDPQNLGAIVRTAVAAGVNM 113 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ KD SA + + K + G +P++ NLAR + L+++ +WI G L+ Sbjct: 114 VVLTKDNSAHVTPGSIKASAGTIFRIPIVITVNLARYIEKLKDKGVWIYGADMRG-KPLW 172 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + K+ L +V G EG G+R+L +E CDEL+SIPM + SLNVSV+ GI ++E +R+ Sbjct: 173 EVKLERPLGIVFGNEGSGIRQLVKESCDELVSIPMKTPIDSLNVSVSAGILIYEVLRR 230 >UniRef50_A2U3D3 SpoU rRNA methylase n=2 Tax=Flavobacteriaceae RepID=A2U3D3_9FLAO Length = 248 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 126/240 (52%), Gaps = 2/240 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I+G+ A+ +E ++++ KG L ++ + + L+ S Sbjct: 7 IFGLRAIIEAIESGS-TINKIYLQKGLRGSLYYELDKLIKDSKIATSTVPVEKLNRLSKN 65 Query: 65 AVHQGIIARVKPGRQYQENDLPD-LIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 + HQG +A++ P Y L D + + PF LILD ++D N GA +R+A+ GV+ Sbjct: 66 SNHQGAVAQISPIDFYDLETLLDDTLEAEKVPFFLILDQLSDVRNFGAIIRTAECTGVNG 125 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I+ K+ SA +NA K + GAA +P+ +V ++ + +LQ NI V + D ++Y Sbjct: 126 IIIQKNGSAPVNAETIKTSAGAAFKMPICKVDHIKDALFILQASNIKTVAATEKTDSSIY 185 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 +A++MG+E G+ + D +P++G++ SLNVSVA G+ L+E VRQRS Sbjct: 186 DVNFNQPIAIIMGSEHRGVNPSVLKMVDYKAKLPLSGNIESLNVSVACGVFLYETVRQRS 245 >UniRef50_C0QBT7 RNA methyltransferase (TrmH family protein, group 3) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QBT7_DESAH Length = 253 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 136/241 (56%), Gaps = 1/241 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E++ GIH ++ L +F + + K R RL ++ + Q + +++ + LD + Sbjct: 9 EILCGIHPIREALRAGRRKFYAILVSKDRSRARLAEILGVAQEQSIPVEITDTMTLDALT 68 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASL-DQPFLLILDGVTDPHNLGACLRSADAAGV 121 D A HQG+ ARV P + + + F+L+++ + DP N GA +R+A AGV Sbjct: 69 DNARHQGVAARVSPFATVRAEGIVKQMPKGVSNRFILVIETLEDPQNFGALIRTALCAGV 128 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +++PK+RSA + + + + GA E + +TN A +R L+ W+ G G+ Sbjct: 129 DHIMIPKERSASPSPSVSRASAGAMEHAEISLITNTAGLLRQLKAMGFWVAGLDGQGTTP 188 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L+ + +TG L LV+G E +G+R L ++ CD L+S+P+ V+SLN SVA GI ++EA+RQ Sbjct: 189 LFSADLTGNLVLVVGGEHKGIRPLVKKECDFLVSLPIKAGVTSLNASVAGGIAMYEALRQ 248 Query: 242 R 242 R Sbjct: 249 R 249 >UniRef50_C2FZ75 Possible tRNA/rRNA methyltransferase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZ75_9SPHI Length = 259 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 83/242 (34%), Positives = 133/242 (54%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++M++GI AV ++ E + +F+ +G L L ++ + Q + L+ Sbjct: 16 NQMVFGIRAVIEAIDSGKE-IESLFVQRGLGGSLFLELKALIKEHEIGFQQVPIEKLNRI 74 Query: 62 SDGAVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + HQG+IA + P + DL P++ + P +L+LDGVTD NLGA R+A+ +G Sbjct: 75 TR-KNHQGVIAVISPITYQKIEDLIPEIYEKGETPLILMLDGVTDVRNLGAIARTAECSG 133 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VHA+IVPK SA++N A K + GA +P+ R NL + + L + I +V + + + Sbjct: 134 VHAIIVPKKGSAEINPDAIKTSAGALYKIPVCRHDNLGKVGKFLIDSGIQLVVSTEKTEE 193 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++Y T ++MGAE G+ D L IPM G + SLNVSV+ G+ L+EA+R Sbjct: 194 SIYSVDYTAPTCIIMGAEDVGVSDDLIRISDHLAKIPMFGEIGSLNVSVSAGVVLYEAIR 253 Query: 241 QR 242 QR Sbjct: 254 QR 255 >UniRef50_C4G1K9 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G1K9_ABIDE Length = 279 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 17/250 (6%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRL-------------LPLIHALESQGVVI 50 ++ GI V LE EV + ++ + I +G + Sbjct: 32 VVEGIKLVDEALEYGK--VLEVVCAESLYNELISGDLSGNRLLAENDKNITNYVKKGSSL 89 Query: 51 QLANRQYLDEKSDGAVHQGIIARVKPGRQYQEND--LPDLIASLDQPFLLILDGVTDPHN 108 + + S+ QGI+A + + L + LL+L+ DP N Sbjct: 90 LVVSDTVFKSMSETKTPQGILAVAEMPDYRLLDKGFLEQAYTKNGKIKLLVLEDTADPGN 149 Query: 109 LGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEEN 168 LG +R+A+AAGV VI+ K N + G+ +P V +L T++ L++ Sbjct: 150 LGTIMRTAEAAGVTGVIMGKGTVDIFNPKVVRSTMGSIFRLPFTYVEDLKETIKELKKSG 209 Query: 169 IWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVS 228 I T + + + K +GR A+++G E G+ + D + IPM G V SLN + Sbjct: 210 ISFYATHLKGEKSYKDIKYSGRSAIIVGNEARGLSDEVADLADTYVLIPMQGKVESLNAA 269 Query: 229 VATGICLFEA 238 VA + ++E Sbjct: 270 VAAALMMYEV 279 >UniRef50_C8P2I4 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P2I4_ERYRH Length = 236 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 86/243 (35%), Positives = 135/243 (55%), Gaps = 9/243 (3%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS I+G + V A L+ + KG ++ + QG+ +Q ++ LD+ Sbjct: 1 MSNYIFGKNTVTAYLKSGQKPKNLYLFNKG----NYQEIVALAKEQGIRVQFVDKFRLDK 56 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 +DG VHQG++ ++ + + L ++I +++ D + DPHNLGA LR+ DA G Sbjct: 57 MADG-VHQGVVIEIQDYKY---HSLQEIIKGAKNNLIVLCDQLEDPHNLGAILRTCDACG 112 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE-AD 179 V V+V K RS L +T KV+ GA +V + TN+ + + L+E W+V Sbjct: 113 VDGVVVGKHRSVGLTSTVAKVSTGAINTVKVAEATNMVKAIAELKEAGYWVVAAENAVDA 172 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + + L LV+G+EG+G+ RL ++ CD L +IPM GSV+SLNVSVATG+ LF+ V Sbjct: 173 VDYTEFNVDMPLVLVVGSEGKGISRLVKKECDILTTIPMQGSVNSLNVSVATGVLLFDIV 232 Query: 240 RQR 242 R+R Sbjct: 233 RRR 235 >UniRef50_C7REQ2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Anaerococcus RepID=C7REQ2_ANAPD Length = 234 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 92/239 (38%), Positives = 143/239 (59%), Gaps = 10/239 (4%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 + IYG V L+ + + +ILK + K + +I L + + I ++++ D+ Sbjct: 2 DKIYGRKPVLDTLDTDI-KVYKAYILK-QNSKLVDKIIDKLNQKNIEISFVDKRFFDKI- 58 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG++ V+ + DL D L+ILD + DPHNLGA +RSA++ G Sbjct: 59 -DMNHQGVMLEVESFKYSSLEDLSDSS------RLIILDKIEDPHNLGAIIRSAESFGFD 111 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AVI+P+ RSA + +T K + GA ++ ++RVTNL RT++ L+++ WI G AGEA + Sbjct: 112 AVIIPERRSASVTSTVYKTSAGAINNIKVVRVTNLTRTIKDLKDKGFWIYGLAGEAHSDI 171 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + + G++ LV+G EGEG+ RL RE+CD LI+IPM G V+SLN SVA I ++E +RQ Sbjct: 172 SHADLRGKVGLVVGNEGEGISRLVRENCDMLINIPMLGRVNSLNASVAAAISMYELLRQ 230 >UniRef50_D1CD69 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD69_THET1 Length = 264 Score = 259 bits (664), Expect = 5e-68, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 121/242 (50%), Gaps = 3/242 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 IYG +AV+ L + + + + L + G+ I+ R LD + Sbjct: 22 YIYGRNAVRECLLAGRRKVYRLLVAYSHSASQTLEAIESLAARSGLQIERVERSILDRLT 81 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 GA HQG++ DL + +L+LD + DP N G LR+A+ G+ Sbjct: 82 HGANHQGVVIEASEFSYSSIEDLLASGELRGKD-ILMLDSLQDPQNFGTLLRTAEVFGIG 140 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT- 181 AVI+P+ RS ++ + GA E + + +VTNLART L+E W++G + + Sbjct: 141 AVIIPEHRSVEVTPAVVNASSGATEHLNISKVTNLARTASKLKEYGYWVLGLEYDESSSV 200 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 ++ + + LV+G+EG G+R L R+ CD L+ IP AG + SLN +VA I L+E + Sbjct: 201 IWDVDLRIPICLVVGSEGSGIRELVRKRCDLLVKIPQAGRIGSLNAAVAGSIALYEIYKS 260 Query: 242 RS 243 +S Sbjct: 261 KS 262 >UniRef50_D1Y8A8 RNA methyltransferase, TrmH family, group 3 (Fragment) n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y8A8_9BACT Length = 269 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 89/238 (37%), Positives = 135/238 (56%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ +G + V LLE PE ++VF+L G +D+ + + + R+ L+ S Sbjct: 22 DLCWGRNPVLTLLEHRPELCRKVFLLAGAQDEFRDTVARLCADGRIPLDFVEREELERLS 81 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 GAVHQG+ ARV P + + D + +++LD DPHNLGA +R+A+ AG Sbjct: 82 GGAVHQGVAARVAPIPPADLDGVVDALDPQAPALIVLLDHCQDPHNLGAVIRTAEVAGAA 141 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 V+ DRSA +N T K + GAA +P+ +V N+ R + L+ + W+VG D T+ Sbjct: 142 CVVCQNDRSATVNGTVVKTSAGAAFRLPVAQVVNVGRAVERLKRKGFWVVGLDHRTDETV 201 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + S + RLALV+G+EGEG+ LT + CD L+ PMAG +LN SVA + +FE VR Sbjct: 202 WSSALPERLALVVGSEGEGISALTAKKCDMLVKFPMAGRTGNLNASVAAALGMFEWVR 259 >UniRef50_A8MI79 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Clostridiaceae RepID=A8MI79_ALKOO Length = 278 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 52/239 (21%), Positives = 104/239 (43%), Gaps = 4/239 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M + G+ V+ ++ + ++ + + L+ + G + + Q + Sbjct: 30 MQFTVEGLRIVEECVKHNGDIAYIIYSEEIYSTQGAEKLLDKIALAGYTLYEVSSQLFSK 89 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 S QGI+A V + ++ + F +ILD + DP N+G +R+A++A Sbjct: 90 ISTTENPQGIMAVVHM-KNRSLEEIK--SQKGKELFFVILDRIQDPGNMGTIIRTAESAN 146 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 AVI+ K N+ + GA +P+I+ + R + L+E + ++ + D Sbjct: 147 ADAVIITKGSVDPYNSKTLRATMGAIFHMPIIQCDD-DRWLDDLKENEVKLIAADLDTDK 205 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 T + +++G E G+ D+ + IP+ G + SLN SVA I +++A Sbjct: 206 TYIDIDYNTSIGIIIGNEANGISEALLSKVDQRVIIPILGKIESLNASVAASILIYKAA 264 >UniRef50_B4U792 RNA methyltransferase, TrmH family, group 3 n=9 Tax=Aquificales RepID=B4U792_HYDS0 Length = 251 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 128/241 (53%), Gaps = 5/241 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S +I+G + V L + +++ I + L+ + +G+ +Q+A RQ L+E Sbjct: 8 SYVIWGRNPVIEALVAG-QSMEKILIAHDSKAP--KELLDLAKERGIKVQIAPRQKLEEL 64 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 ++ QG++A + P E +L ++ F ++LD +TDP N+G+ R+ + G Sbjct: 65 ANTKKTQGVVAILSPITYVPEEELFRKTIE-EKGFFVVLDHITDPQNVGSIARTVEVFGG 123 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +++PKDRSA +NA K + GA + + + ++++ ++ +E W+ + Sbjct: 124 IGLLIPKDRSAPINAVVVKSSSGAIFHLKISKTPSISKAIKTFKEMGGWVYALE-KGGKD 182 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + + + +V+G+EGEG+ + EH D +SIPM G V+SLNVS A ICL+E + Sbjct: 183 ITKVDFAYPMCIVLGSEGEGVSKNVLEHSDVRVSIPMKGKVTSLNVSAAGAICLWEVYKN 242 Query: 242 R 242 + Sbjct: 243 Q 243 >UniRef50_B1I0T3 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridia RepID=B1I0T3_DESAP Length = 251 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 86/239 (35%), Positives = 133/239 (55%), Gaps = 5/239 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +IYG + V+ L ++ +++G + + L + +Q+ R LD +D Sbjct: 12 VIYGRNPVREALR-GGRTLHKILVVRGADPRLFRELRELARPGRIPVQVVERPLLDRLTD 70 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G HQG+ A V +L + P +++L+ + DP NLGA LR+A+AAGV Sbjct: 71 GGAHQGVAATVSVKDFATVEELL----GTENPLIVVLNAIQDPRNLGAILRTAEAAGVDG 126 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +VP R+A L A K A GA E +P+ RVTN+A T+R +++ +W+VG + + + Sbjct: 127 AVVPSRRAAPLTPAAAKTAAGAVEYLPVARVTNIALTLREFKQKGLWVVGADPDGPVSYW 186 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + G LALV+G E G+ R R CD L+ IPM+G V SLN SVA + ++EAVRQR Sbjct: 187 DADLGGPLALVIGGEAGGLGRAVRAECDSLVRIPMSGRVGSLNASVAAALLIYEAVRQR 245 >UniRef50_Q2S2J6 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Rhodothermaceae RepID=Q2S2J6_SALRD Length = 253 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 91/243 (37%), Positives = 131/243 (53%), Gaps = 6/243 (2%) Query: 7 GIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAV 66 G V L+R ++V + + ++ + + +G +Q L +SDGA Sbjct: 11 GRGPVLEALKRDDLGIEKVMLKQDVSGAQIGAIRSIADDRGTPVQYVPEARLRHESDGAT 70 Query: 67 HQGIIARVKPGRQYQENDLPDLIASL------DQPFLLILDGVTDPHNLGACLRSADAAG 120 HQG++A P R + + + IA QP LL++D VTDP N GA LRSA AAG Sbjct: 71 HQGVVAITAPIRYREVDAMLSDIAPTWDAVQTAQPMLLVVDRVTDPRNFGAMLRSAVAAG 130 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VIVP A LNA A K + G A +P+ R +L R + L+E ++ G G A+ Sbjct: 131 TDGVIVPTREMAPLNAAAIKASAGTAPRIPIARTDDLPRVLTQLKERGYFVYGAEGTAET 190 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 L+ + +A+V+G+EG+G+ E CDEL+SIPM G SLNVSVATG+ +FEA R Sbjct: 191 PLWDADWDRPVAVVLGSEGQGLAPEVAEACDELLSIPMRGPAESLNVSVATGLLVFEAAR 250 Query: 241 QRS 243 R+ Sbjct: 251 SRT 253 >UniRef50_B1GYT1 23S rRNA methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYT1_UNCTG Length = 251 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 79/241 (32%), Positives = 133/241 (55%), Gaps = 3/241 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++ G + V LL+ A ++ + + + +I+ + +G+ + + LD+ Sbjct: 11 ENVVCGRNPVLELLKAARRTVNKIMVSRTARGVVISEIINLAKQKGIALHSVPPEKLDKF 70 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 S QGI+A V P + + +DL + +P L+ILDG+ DPHNLGA +R+ A G Sbjct: 71 S--ESSQGIVAEVSPVQYTELSDLIERSKKSLKPLLVILDGLEDPHNLGAIIRNCVAFGA 128 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+PK R+A +N T K + GA E + + RV N + + +L+E + WIVG Sbjct: 129 DGVIIPKWRAAGVNETVSKSSAGAVEHISISRVENTNQAIGLLKENSFWIVGAE-NGGRI 187 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L + + LA+++G+EG G+ LT+++ D LISIP +SSLN S A+ + L+E ++ Sbjct: 188 LEKIDLPFPLAVIIGSEGFGLHSLTKKNSDFLISIPQENIISSLNASCASAVILYEIAKK 247 Query: 242 R 242 R Sbjct: 248 R 248 >UniRef50_A8STN2 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=A8STN2_9FIRM Length = 272 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 18/244 (7%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDK-----RLLPLIHALESQGVVIQLANRQYL 58 ++ GI + + + E+++ + + L L +A E + + + Sbjct: 36 IVEGIRMFREI---PVDSVDEIYMSESAYAEYCDEDDLQELYNAAE-----VTVMSDSVF 87 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 S QG +A V+ ++ D+ S D LILD + DP N+G RSA+A Sbjct: 88 AGVSQTKTPQGCMAVVRCFHY----EMTDIAGSTDTATYLILDTIQDPGNMGTIFRSAEA 143 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AG+ VI+ N + GA VP ++ +L T+ L+ + + I G + Sbjct: 144 AGITGVIIGPGSCDPYNPKVVRSTMGAIFRVPFVQSDDLIYTIDALKRKGVLIYGAHLDG 203 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + LY ++ ++A ++G EG G+ + + D L+ IPM G V SLN +++ + +EA Sbjct: 204 EE-LYDTEFPDKIAFLIGNEGNGLSKAVSDTADRLLRIPMEGKVESLNAAISATLLSYEA 262 Query: 239 VRQR 242 +RQR Sbjct: 263 MRQR 266 >UniRef50_C1TM87 rRNA methylase, putative, group 3 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TM87_9BACT Length = 269 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 89/239 (37%), Positives = 130/239 (54%), Gaps = 3/239 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++ +G +AV ++LE P +++++ G + L+ V + AN YLDE Sbjct: 28 KDLCWGRNAVISMLETVPSACKKIYLATGIQTTFRDDLLSLAGKNAVEVTEANGSYLDEI 87 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + G HQGI+A + + DL LL +D V DPHN GA +R+A+A G Sbjct: 88 TGGEKHQGIVANIDLPKPR---DLSQFSPKKGPSLLLAMDHVKDPHNFGAMIRTAEAVGA 144 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI P RS + T K + GAA VPL VTNL R+M +L++E W+VG E Sbjct: 145 LGVIYPSRRSVGVTGTVIKTSAGAAFRVPLYEVTNLVRSMEILKKEGYWVVGLDHEEPRD 204 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 ++ S + +L L++G+EGEG+ RL+ E CD+L IPM G SLN SVA + +FE R Sbjct: 205 IWSSPLPDKLVLMVGSEGEGLSRLSSERCDDLRRIPMVGKTGSLNASVAAALGMFEWRR 263 >UniRef50_C4Z380 RNA methyltransferase, TrmH family n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z380_EUBE2 Length = 279 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 12/245 (4%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVV---IQLANRQYL 58 ++ G+ V + + ++++ + + ++ QG+ I++ Sbjct: 43 EYVVEGVRMVSEV---PADLLVKIYMSERFHSNNPEYVHELVKKQGISSDSIEIVADNVF 99 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 D S QGI+A V+ + L D P L++++ + DP NLG LR + Sbjct: 100 DRMSQTQTPQGIMAVVRMKDSSISDMLTD------NPLLILVENLQDPGNLGTILRMGEG 153 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 AGV VI+ + N + G+ VP + V + + + + I + + Sbjct: 154 AGVTGVIMSSNTVDIYNPKTIRSTMGSIFRVPFVYVQDFSDAVSQCKNAGIKVYAAHLDG 213 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 +T A ++G EG G+ + D LI IPM G V SLN ++A I +EA Sbjct: 214 KNTYLGEDYREGTAFLIGNEGNGLTEDITKQADTLIRIPMQGEVESLNAAIACTILTYEA 273 Query: 239 VRQRS 243 VRQRS Sbjct: 274 VRQRS 278 >UniRef50_D0GJ12 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Fusobacteriaceae RepID=D0GJ12_9FUSO Length = 244 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 68/241 (28%), Positives = 127/241 (52%), Gaps = 10/241 (4%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M ++I GI+ V +L+ +++ + KG + + +++ + + I +R Sbjct: 13 MEKII-GINPVTEVLKSDKN-IEKIEVYKGIKKDTIKEILNLASKRNIKIFYTDR----- 65 Query: 61 KSDGAVHQGIIARVKPGRQY-QENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 QG++A V Y + + + + + D+ ++ILD + DP N GA +RSA+ Sbjct: 66 --RTENSQGVVALVSEFDYYLELTEFFEKVLAKDKSIVVILDQIQDPRNFGAIIRSAECF 123 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 GV +++ + ++ T K + GA E V +I+VTN++ T+ ++ + G + + Sbjct: 124 GVDGIVIQDRNNVKVTETVVKSSTGAIEHVDIIKVTNISDTIDKFKKYGYKVYGAEADGE 183 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + Y+ ++ LV+G+EG GMR+ REHCD+ + I + G +SLNVSVA GI L E Sbjct: 184 NLYYEESYPKKVCLVLGSEGNGMRKKVREHCDKTLKIHLKGQTNSLNVSVAGGIILAEMS 243 Query: 240 R 240 + Sbjct: 244 K 244 >UniRef50_Q14PR4 Putative trna/rrna methyltransferase protein n=1 Tax=Spiroplasma citri RepID=Q14PR4_SPICI Length = 244 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 71/241 (29%), Positives = 115/241 (47%), Gaps = 5/241 (2%) Query: 1 MSEMIY--GIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYL 58 M E IY GI+ V L + ++++L + K + +S+ + + + + Sbjct: 1 MQEYIYIYGINPVVESLLNPAVKINKLYLL--PQGKNNDYYLKLAKSRQLKVVFCSAVEM 58 Query: 59 DEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 + HQ +I + + Y + PFLL+LD ++DPHN GA LR+ D Sbjct: 59 TTLVQTSKHQSLILEICKPQNYSLASITTKALQNKHPFLLVLDQISDPHNFGAILRTCDL 118 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE- 177 V VI+ R +NAT K + GA VP+ RV NL + L+++ WI T+ Sbjct: 119 FNVDGVIILDKRQVDINATVAKTSAGAFNYVPVCRVNNLTNAIEYLKKQGFWIYATSLNT 178 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 + + K + L++G EG G+ +H D I IP AG + SLNVSVA+ I +++ Sbjct: 179 KAQNVSELKYDIPICLIVGNEGTGISAKLLKHADFNIYIPTAGHLDSLNVSVASAILIYQ 238 Query: 238 A 238 Sbjct: 239 I 239 >UniRef50_B1I4I6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I4I6_DESAP Length = 272 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 4/237 (1%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G+ ++ L+ E ++ R + L+ + G + +Q L +D Sbjct: 32 EGLKVIEEALQAGWEVRMLLYTSDVLRHPRGVALLDKARATGTELWECEKQVLAVVTDTK 91 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QG +A + L L+ P +++LDG+ DP NLG +R+ADA + VI Sbjct: 92 TPQGALALIAKPEH----SLDVLLQGRGTPLVVVLDGLQDPGNLGTIIRTADACELQGVI 147 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 + + + + GA +P + + D++LY+ Sbjct: 148 TLEGTVDLFHPKVVRASAGALFHLPAFGDLPAPAVLEFFTGAGVQKFVADPRGDYSLYEC 207 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + AL MG E G + D +++IPM G SLNV VA + ++EAVRQR Sbjct: 208 DFSRPTALFMGNEARGCGEMLHAAADRVVAIPMPGQAESLNVGVAASLFIYEAVRQR 264 >UniRef50_C9RBD1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Ammonifex degensii KC4 RepID=C9RBD1_AMMDK Length = 254 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 130/240 (54%), Gaps = 5/240 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E++YG HAV+ L ++ + +G L S+ V +Q+ + LD + Sbjct: 9 ELVYGRHAVKEALLAG-RSLYKILVARGLGGAFFHELRSLAASRSVPVQIVPAEALDRLT 67 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 VHQG +A V P +++ LL+L +TDP NLGA LR+A A GV Sbjct: 68 ARGVHQGCVALVSPYNYASLDEILA----THPSCLLVLAYITDPRNLGAILRTAAAVGVE 123 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 VI+P R+A L A A K + G AE V + RVTNLA+T+R L+E+ W++G +A +L Sbjct: 124 GVIIPSRRAAGLTAEALKASAGGAEHVKVARVTNLAQTLRYLKEQGFWVLGAEADAKVSL 183 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++++ L +V+G E G+ ++ R CD L+ IP + LN SVA + L+E +R++ Sbjct: 184 WEAEWNEPLVVVIGGEDTGLGKVVRRECDVLVRIPTTAKMPCLNASVAAAVILYEVLRRQ 243 >UniRef50_Q2RFM6 RNA methyltransferase TrmH, group 3 n=2 Tax=Clostridia RepID=Q2RFM6_MOOTA Length = 246 Score = 255 bits (654), Expect = 8e-67, Method: Composition-based stats. Identities = 89/243 (36%), Positives = 136/243 (55%), Gaps = 3/243 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M+E + G + V+ L ++ + E + + +I+ +GV +Q NR L++ Sbjct: 1 MTETLAGRNQVREALRAG-RPLNKILLAPHLEGQAIGEIINLARERGVPLQRVNRAALEK 59 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAA 119 + HQG++A DL + + PFL++LD V DPHNLGA LRSA+A Sbjct: 60 LAG-HHHQGVVALAAAREYADLEDLLARAGEAGEPPFLIMLDRVEDPHNLGAILRSAEAV 118 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G H VI+P+ R L A + A GA E VP+ RVTNLART+ L+ + +W +G AG+A Sbjct: 119 GAHGVIIPRRRGVGLTAAVARAAVGAQEYVPVARVTNLARTLEELKGKGLWAIGAAGDAG 178 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + + T L LV+G+EG G+ L R CD + +PM G ++SLNV+ A + ++E + Sbjct: 179 QEAFNADFTVPLVLVLGSEGRGLSPLVRSRCDFTVHLPMRGRINSLNVATAATVLMYEVL 238 Query: 240 RQR 242 RQR Sbjct: 239 RQR 241 >UniRef50_D2RLA3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Acidaminococcus RepID=D2RLA3_ACIFE Length = 260 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 12/237 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G AV+ L + +F + E E+ + L + + Sbjct: 32 LLEGKRAVEEALASGW-TIRALFFTRLPEGWE-----QQAENSSLPWYEVPLPVLQKITA 85 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 Q + A V+ + +L ++ +L+LD + DP NLG +R+ADA G Sbjct: 86 TEDPQSVAALVE----LRREELAAFAP--ERGMVLVLDRIRDPGNLGTLIRTADALGAAG 139 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ ++ + N + G+ +P+ ++ + TA E + Sbjct: 140 VVLLENTADLYNPKVVRSTMGSLFHLPVFTGVKTGELEEWCRQHGYALWATALEGAEDMT 199 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + + ALV+G+E EG+ D+ + IPMAG SLNV+VA GI +FEA R Sbjct: 200 RLTWPEKTALVLGSEAEGVSPEILAAADQKVKIPMAGHAESLNVAVAGGIVMFEAAR 256 >UniRef50_B2V596 RNA methyltransferase, TrmH family n=7 Tax=Clostridium RepID=B2V596_CLOBA Length = 262 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 11/240 (4%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +I G V ++ + + IL ++L I + + + E Sbjct: 29 KYVIEGFRLVDEAIKANLD--IDYLILTEIGYEKLDNYIDKDKIKKHKVYCITDTLFKEL 86 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + QGIIA VK + F L D V DP NLG +R+A AAGV Sbjct: 87 ASTENPQGIIAIVKM---------NNKKLDFQGDFYLFCDKVQDPGNLGTIIRTAHAAGV 137 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 + +++ K N + G+ +P+ + ++ L+++ ++ T+ E+ Sbjct: 138 NGIVLSKGTVDIYNEKTIRSTMGSLFYMPIYYDDDEFSLIKSLKKDGFTLIVTSLESSKD 197 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 ++ + G++ L +G EG G+ + D + IPM G SLNV++AT I ++E VRQ Sbjct: 198 FFKEDLKGKIILTVGNEGNGVSNEVLDLADRRVKIPMPGGAESLNVAIATSIIIYEKVRQ 257 >UniRef50_D0JB44 tRNA/rRNA methyltransferase n=2 Tax=Blattabacterium RepID=D0JB44_BLASB Length = 253 Score = 254 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 7/247 (2%) Query: 1 MS--EMIYGIHAVQALLERAPERFQEVFILKGRE--DKRLLPLIHALESQGVVIQLANRQ 56 MS E++YGI + + + ++F +G LI + + + IQ +Q Sbjct: 1 MSKLEIVYGIRPLIEAIRS-KKTISKLFFQRGFRKISNAYKELISLSKKENIPIQTVPKQ 59 Query: 57 YLDEKSDGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRS 115 + HQG+ A + P YQ DL + P L+ILD +TD N G+ +R+ Sbjct: 60 KFYQL-KNKNHQGVFAILSPIETYQIKDLLPVFYEKGKNPLLVILDRITDVRNFGSIIRT 118 Query: 116 ADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTA 175 + G A+I+PK +A + + + K + GA VP+ + N+ T+ L + IV Sbjct: 119 SACVGADAIIIPKKYTAMIGSDSIKTSSGALFKVPICQEKNIKNTIEFLMNSGLKIVSAT 178 Query: 176 GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 +++ Y +G AL++G E +G+ E E IP +SSLNVSVA G+ L Sbjct: 179 EKSNIYWYNIDFSGPTALILGNEEKGISPKYLEISCEKAKIPAIKGISSLNVSVACGVIL 238 Query: 236 FEAVRQR 242 +E RQR Sbjct: 239 YEVFRQR 245 >UniRef50_B8FZK3 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Desulfitobacterium hafniense RepID=B8FZK3_DESHD Length = 271 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 4/240 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G V+ L R +VF +++ L AL+ +GV + + + L + SD Sbjct: 29 LIEGWRFVEEGLARGAH-LTKVFFCSECKNESWPQLAEALKVKGVPVIEVDERVLRKMSD 87 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQ--PFLLILDGVTDPHNLGACLRSADAAGV 121 QGI+A VK R ++ + + + P LLILDGV DP N G LR+A AAGV Sbjct: 88 TENPQGILAVVKQSRWTWDDFIEIVNPAGRSAIPMLLILDGVQDPGNCGTILRTALAAGV 147 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 V + + N + GA S+ ++ +++ + I + E Sbjct: 148 TQVCLTEGTVDLYNLKVLRSTMGAIFSLNIVTHCQPEEILKVCRSHKIPVFVGDVEG-TD 206 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 LY++ +ALV+G EG G + + I+IPM+ V SLNV++ATGI L+E R+ Sbjct: 207 LYETHFAQPMALVVGNEGNGPSAAFQGPGVKRITIPMSHQVESLNVAMATGIILYEVRRR 266 >UniRef50_Q73MR5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Treponema denticola RepID=Q73MR5_TREDE Length = 258 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 86/257 (33%), Positives = 132/257 (51%), Gaps = 16/257 (6%) Query: 1 MSEMIYGIHAVQALLERAPERFQE-------VFILKGREDKRLLPLIHALESQGVVIQLA 53 M ++I G HA+ +L + ++ + I +E R+ ++ A + I+ Sbjct: 1 MKKIITGFHAIDEILRAEKLKIEKEKNRKPSLEIFYSKEGPRVKKILEAARKLNLKIEKK 60 Query: 54 NRQYLDEKSDGAV-----HQGIIARVK---PGRQYQENDLPDLIASLDQPFLLILDGVTD 105 + Q+LD + H+GI+ + + ++ +A F++ILD VTD Sbjct: 61 DNQFLDSLTKTLPEQLRDHRGIVLVTEAENQKKGMSVDEFFAKLAEKGSAFVVILDSVTD 120 Query: 106 PHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQ 165 PHN G+ +RSAD G+ +IVP+++SA KV+ GA VP + VTNL RT+ L+ Sbjct: 121 PHNTGSIIRSADQFGIDGIIVPENKSAGGFEIISKVSAGALAWVPFVEVTNLVRTVERLK 180 Query: 166 EENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSL 225 +E WI G L + L+MG EG GM RL E CDE++SIP G + SL Sbjct: 181 KEGFWIYGADA-GGKALPNLTFPKKTVLIMGNEGRGMSRLVEETCDEIVSIPTKGKLDSL 239 Query: 226 NVSVATGICLFEAVRQR 242 NVSVA GI L+E R++ Sbjct: 240 NVSVAAGILLYEISRKK 256 >UniRef50_A0M5B1 TrmH family tRNA/rRNA methyltransferase n=16 Tax=Bacteroidetes RepID=A0M5B1_GRAFK Length = 245 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 73/239 (30%), Positives = 121/239 (50%), Gaps = 2/239 (0%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I+GI V ++ + ++VFI K L L+ I + L++ S Sbjct: 7 IFGIRTVIEAIDS-KKDIEKVFIQKDLSGPLFKELNRNLKEGNYNISYVPVEKLNKLSKN 65 Query: 65 AVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQG++A + P L D S P ++LDG+TD N GA +R+A+ GV Sbjct: 66 GNHQGVVANISPIGFVSLEKLVEDSQKSSTTPLFVLLDGITDVRNFGAIIRTAECCGVTG 125 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I+ + SA +NA K + GA ++P+ +V ++ + LQ +I ++ + D ++ Sbjct: 126 IIIQEKGSAPINADTVKTSAGAVFNIPICKVNHIKDAVFHLQTYDIKLIAATEKTDDVIF 185 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + +A++MG E +G+ + D +PM GS++SLNVSVA G L+EAVRQR Sbjct: 186 DIDLKQPIAIIMGDEAKGISNSILKSVDYKAKLPMLGSIASLNVSVACGAFLYEAVRQR 244 >UniRef50_B0TZ81 tRNA/rRNA methyltransferase n=20 Tax=Francisella RepID=B0TZ81_FRAP2 Length = 248 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 114/246 (46%), Positives = 157/246 (63%), Gaps = 4/246 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLAN--RQYL 58 MS +IYGIHAV +L+E + + + K + ++ +I ES+G+ + + +Q Sbjct: 1 MSSLIYGIHAVDSLVEANQAK-EILVFKKSNANHKIESIIAKAESKGLKVTFIDSFKQLP 59 Query: 59 DEKSDGAVHQGIIAR-VKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSAD 117 A HQ I A + + Y END+ +LI F+LILD V DPHN GAC+RSA Sbjct: 60 GRVRKDANHQNIFAIEINDFKTYSENDIENLIPQDKNAFILILDNVQDPHNFGACIRSAH 119 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 +AG+ +I+PKD SA +NAT KKVACGAAE ++ VTNLAR + L++ +WI+G AGE Sbjct: 120 SAGIDFIIIPKDNSAPVNATVKKVACGAAEHTKIVVVTNLARAIEKLKQLGVWIIGLAGE 179 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 A+ +LY + +A+V GAEG GMR+ T+ CD L +PM G VSSLNVSVATGI L+E Sbjct: 180 ANDSLYSMNLADSVAIVAGAEGSGMRQRTKASCDFLAKLPMLGEVSSLNVSVATGIALYE 239 Query: 238 AVRQRS 243 VRQR+ Sbjct: 240 TVRQRA 245 >UniRef50_C7H9L6 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Ruminococcaceae RepID=C7H9L6_9FIRM Length = 267 Score = 253 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 77/244 (31%), Positives = 125/244 (51%), Gaps = 6/244 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++YG + V LL+ V I +G + G ++ + L + Sbjct: 24 LVYGKNPVTELLKSGS-GVDTVLIAEGMAPAVAAYYTAMAKEAGATVKRVHPNKLRLMTG 82 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLIL-DGVTDPHNLGACLRSADAAGVH 122 HQG+ A DL ++ +P L+L DG+ DPHNLGA +RSA G H Sbjct: 83 TESHQGVAAFASEIEYVTVEDLLNVAREKGEPPFLVLSDGIEDPHNLGAVMRSALLCGAH 142 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +++PK A + T K + GAAE +P+ RV N+ T+R L+++ +++ + L Sbjct: 143 GIVIPKRGGASVTPTVIKSSAGAAERLPVARVANIGETIRRLKDQGVFVYCADMDG-VPL 201 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAG---SVSSLNVSVATGICLFEAV 239 ++ +TG +ALV+G+EG G+ +L ++ CD ++ + MA V S NVSVA GI L+E Sbjct: 202 RKNNLTGPIALVLGSEGSGVSQLVKKLCDGVVRLDMAAQGTGVDSFNVSVAAGIILYEIQ 261 Query: 240 RQRS 243 QR+ Sbjct: 262 SQRA 265 >UniRef50_C0Z9E4 Putative RNA methyltransferase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z9E4_BREBN Length = 271 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 3/240 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G H V+ L+ E ++ + D + V + A L + S+ Sbjct: 33 LVEGAHLVEEALKSGAEVVTVIYDQQRDMDPACQRALANHPEA-VQVIAAPETVLAKLSE 91 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI+A VK + LL LD + DP NLG LR+A+AA + Sbjct: 92 TKSPQGIVAEVKKTAADWAKWVDQKREEQGSLLLLFLDEIQDPGNLGTILRTAEAAAIDG 151 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE-ADHTL 182 V++ N + GA +P+ +L T + + ++ ++ E + Sbjct: 152 VVLGSGSVDIYNGKVVRATMGALFRIPVFT-QSLVDTADEWKAKGGRVLISSLEQNSVSY 210 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++ G ALV+G EG G+ + D+ + IP+ G SLN +VA GI ++EA R+R Sbjct: 211 DEADYAGLTALVIGNEGRGVSKEMFAKADQFVHIPLYGGAESLNAAVAAGIFVYEAQRKR 270 >UniRef50_A5N255 Predicted methyltransferase n=28 Tax=Clostridium RepID=A5N255_CLOK5 Length = 266 Score = 253 bits (647), Expect = 5e-66, Method: Composition-based stats. Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 11/239 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G V+ + ++F+ + ++ + I + L S Sbjct: 31 IIEGFRFVKEAINSEFY-ISQIFLSEYFTNREERFFLERNNKVKCPIYFVTDEILRSISC 89 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGIIA VK +L +Q F ++ D + DP N+G +RSA A+G Sbjct: 90 TENPQGIIAVVKN---------KELNIKDEQGFYILADRIQDPGNMGTIIRSAHASGALG 140 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I K N + G+ +P+I+ NL + + L++ ++ ++ ++D Y Sbjct: 141 IITTKGTVDVYNEKTLRATMGSIFYIPIIQDENLEK-VSTLRQMGFKLISSSLDSDINFY 199 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + G++ + +G EG G+ + ++ D ++IPM G+ SLN +VA I +FE VRQ+ Sbjct: 200 DMDLRGKIIIAIGNEGNGLLQDVKKISDIEVNIPMPGNAESLNAAVAASIMMFEVVRQK 258 >UniRef50_C8N9X3 23S rRNA (Guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N9X3_9GAMM Length = 243 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 106/236 (44%), Positives = 147/236 (62%), Gaps = 4/236 (1%) Query: 7 GIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAV 66 GIH VQ LL +++ ++ K L L+ +++GV ++ ++ G Sbjct: 9 GIHTVQQLLADGH--VLRLYVADNKKSKNLTALVGEAQARGVPVETVALYEIEMMLPGVR 66 Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 HQG+ A + Q D D IA +++P LL+LD + DPHNLGACLRSA AAGVHAV++ Sbjct: 67 HQGVAAVSEARGQA--ADWADAIAGVEKPLLLVLDSIQDPHNLGACLRSAAAAGVHAVLI 124 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 P R+A + +KVACGA E +PL RV+NL R + +Q + IW+VG AG A +LY + Sbjct: 125 PNSRAADVTPVVEKVACGATEILPLFRVSNLRREVERMQRQGIWVVGGAGGAAQSLYATD 184 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 +T LA+++G EGEG+R RE CD L+ IPMA + SLNVSVA G+ LFEA RQR Sbjct: 185 LTVPLAVIVGNEGEGIRHGLREQCDFLVQIPMAEGMESLNVSVACGVMLFEARRQR 240 >UniRef50_Q0VMF8 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Alcanivorax RepID=Q0VMF8_ALCBS Length = 251 Score = 252 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 116/242 (47%), Positives = 155/242 (64%), Gaps = 6/242 (2%) Query: 7 GIHAVQALLERAPERFQEVFILK---GREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 G HAV+ALL PE E+F+ R+D RL L+ A + G+ IQ A R+ L++ + Sbjct: 9 GFHAVEALLRHRPEAVLELFVQDTRADRDDPRLAALMQAAKDFGIAIQRARREVLEKHAG 68 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLD-QPFLLILDGVTDPHNLGACLRSADAAGVH 122 QGI+AR +P R E+ L + +P LL+L+ VTDPHNLGACLRSADAAGV Sbjct: 69 PQN-QGIVARARPRRPLDESALLQWLDGKPAKPLLLVLENVTDPHNLGACLRSADAAGVQ 127 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA-DHT 181 AVIVP+ +A L A + A GAAES+ + NLA + L++ +W+VGTA E + Sbjct: 128 AVIVPRRNAAGLTPVACRTAVGAAESLAYYEIGNLASLLDQLRDRGVWVVGTALEERSES 187 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L+ + LA+VMGAEG G++RLTR+ CD+L+ IPMAG V SLNVSVATG+ LF+ Q Sbjct: 188 LFTFQAPESLAVVMGAEGSGLKRLTRDKCDQLLEIPMAGEVQSLNVSVATGVMLFQVRAQ 247 Query: 242 RS 243 RS Sbjct: 248 RS 249 >UniRef50_B5YID5 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YID5_THEYD Length = 248 Score = 252 bits (645), Expect = 8e-66, Method: Composition-based stats. Identities = 83/240 (34%), Positives = 140/240 (58%), Gaps = 4/240 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 IYG++ V + + + +E++I K R K L ++ E + + +++ ++++ + Sbjct: 9 YIYGVNPVLESFKIS-DALKEIYISKNRISK-LKEILRLAEEKSISVKIVEETFIEKITQ 66 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 G VHQG++A++KP + ++ + + F LILD V DP N G+ R ADAAGVH Sbjct: 67 G-VHQGVVAKIKPKKTITLDEALKISFKKNEPAFFLILDLVEDPQNFGSICRIADAAGVH 125 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+I K RS + + K + GA V L+ + N+ ++ L+E NI I G +A Sbjct: 126 AIIYQKKRSVGIVPSVWKASAGAVWHVNLVEINNIKYAIKTLKEHNITIYGAEAQAKDVF 185 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++S T L L++G+EG+G+R+ CD++I IPM G+++SLNVSVA+ + FE +RQR Sbjct: 186 WESDFTQPLGLIVGSEGKGIRQTVIALCDKVIKIPMRGTINSLNVSVASALITFEVLRQR 245 >UniRef50_C7MMG3 rRNA methylase, putative, group 3 n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMG3_CRYCD Length = 300 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 82/255 (32%), Positives = 137/255 (53%), Gaps = 15/255 (5%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKG-REDKRLLPLIHALESQGVVIQLANRQYLD 59 M+E I G H V L +F+ G + D+ L ++H Q +V++ R LD Sbjct: 1 MAEFIEGKHPVWEALSTH-VPITRIFLADGNKHDRLLQDILHMAARQHIVMETVPRAQLD 59 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDL-------------IASLDQPFLLILDGVTDP 106 ++S HQGI+A+ +P +D+ ++ +++LD +TD Sbjct: 60 KRSKRGSHQGIMAQAQPFAYASLDDIIARGNDQAVSLAVSHSSSAAPCALIIVLDHITDA 119 Query: 107 HNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQE 166 NLGA RSA++ G +I+P RSA + A+ K + GA +P+ +V NL + + L+ Sbjct: 120 GNLGAIARSAESVGAAGIIIPNKRSAYVTASTYKSSAGAISHIPVAQVANLQQALARLKN 179 Query: 167 ENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLN 226 E W+ G + +A+ ++ + +TG + LVMG E G+ RLT+E CD +S+P G VSSLN Sbjct: 180 EGYWVAGASEKAEGGIWDANLTGNVCLVMGNENTGLARLTQEACDFFVSLPQRGVVSSLN 239 Query: 227 VSVATGICLFEAVRQ 241 V+ + +C++E +RQ Sbjct: 240 VAQSATVCMYEWLRQ 254 >UniRef50_C6CVT7 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Bacillales RepID=C6CVT7_PAESJ Length = 264 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 10/239 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G+H VQ + + V+ E L G A Q + + + Sbjct: 33 IIEGVHLVQEAFKSSAAVQCVVY---NSERGIPHELEQLAREGGAEWVQATTQVMAKCTG 89 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 + A ++ ++ D + +++LDGV DP N+G +RSADA G A Sbjct: 90 TDTPPPVFAVLEKLKR------DDTALFRNNSLVVVLDGVRDPGNVGTIIRSADAVGADA 143 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ K N + G+ +P+I +LA + Q + I +VGT+ +A HT Y Sbjct: 144 VVLGKGSVDLYNPKTVRSTMGSLFHLPIIEA-DLAELLPEAQSKGIKLVGTSLQATHTCY 202 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 T L+MG E EG+ R DE + IPM G SLNV++A + L+EAVRQR Sbjct: 203 TYDWTAGTWLLMGNESEGLSDAVRLAVDESVIIPMQGEAESLNVAMAATVLLYEAVRQR 261 >UniRef50_Q8D323 YjfH protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D323_WIGBR Length = 250 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 94/241 (39%), Positives = 157/241 (65%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M+E+IYGIH ++ ++ + + LK R+D + LI + + I+ ++++L++ Sbjct: 1 MNEIIYGIHVIEEFIKNKSNKILCILFLKSRKDIKFKKLILISNEKNIKIKFVDKKFLNK 60 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 ++ HQGI+A +K + +E L ++ + F LILDG+ DP NLG+C+RSA G Sbjct: 61 ITNNKKHQGIVAYIKNSKILKEPFLLKMLENKKNYFFLILDGIMDPRNLGSCIRSAYIFG 120 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V AVI+ K+RSA++++ KKVA G+ + +PLI VTNL RT+ +L++ NI I+GT+ +A Sbjct: 121 VQAVIIRKNRSAKISSAVKKVASGSLDLIPLIYVTNLVRTINLLKKYNIQIIGTSRKAQL 180 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + K+ +A+VMG+E G+ RL +E+CD +++IP + LN+SVATGIC+FE +R Sbjct: 181 DICNKKLKQSIAVVMGSENLGISRLVKENCDNILNIPTVKNNLPLNISVATGICIFEIIR 240 Query: 241 Q 241 + Sbjct: 241 K 241 >UniRef50_B5CKU5 Putative uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CKU5_9FIRM Length = 279 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 66/255 (25%), Positives = 106/255 (41%), Gaps = 23/255 (9%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G V+ + ER + ++I + E K + G+ ++ + SD Sbjct: 30 LVEGPRMVEEI---PKERIERLYISESFERKNPAYI----RELGMPAEVLSDPVFSYVSD 82 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQ----------------PFLLILDGVTDPH 107 QGI+A VK E+ L ++ P +++LD + DP Sbjct: 83 TKNPQGILAVVKRLEYTMEDVLGKSALKCEEKSGEKEKNPENHQIRVPHVIVLDNLQDPG 142 Query: 108 NLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE 167 NLG R+A+AAG +++ D N + GA +P V +L ++ L + Sbjct: 143 NLGTIFRTAEAAGATGILLSSDSVDVYNPKVIRSTMGAVFRMPFFYVKDLPAAVKSLSSQ 202 Query: 168 NIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNV 227 I + + T A ++G EG G+R E D LI IPM G SLN Sbjct: 203 GIRTYAAHLNGKNVYDEEDYTEGCAFLIGNEGNGLRDEVSECADCLIRIPMCGKAESLNA 262 Query: 228 SVATGICLFEAVRQR 242 +VA + +FEA RQR Sbjct: 263 AVAAAVLMFEAGRQR 277 >UniRef50_D2QM84 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Flexibacteraceae RepID=D2QM84_9SPHI Length = 276 Score = 249 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 76/244 (31%), Positives = 135/244 (55%), Gaps = 8/244 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 EM++GI +V L+ + ++++ KG + + + + V IQ + LD + Sbjct: 31 EMVFGIQSVIETLKSDQQ-IDKLYMEKGLSNP---DIQNLAFQKRVTIQRVPVERLDRFT 86 Query: 63 DGAVHQGIIARVKPGRQYQEND-LPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 HQG++ + + + ++ + D+ + PF L+LD +TD N GA R+A+ G+ Sbjct: 87 R-KNHQGVVCLIAQVQYVKLSNVIADVFERGEVPFFLLLDRITDVRNFGAIARTAECTGI 145 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +++P +A +N+ A K + GA + + R +L T++ LQE I +V ++ Sbjct: 146 QCIVIPGRGAAAINSDAMKTSSGALNHISVCREPDLTETVKYLQESGITVVACTEKSARD 205 Query: 182 LYQ--SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 LY+ + +TG +A++MG+E +G+ D + IP+ G+V SLNVSVATG+ L+EAV Sbjct: 206 LYERTTDLTGPMAIIMGSEEDGISPELLRMVDTHVKIPLLGAVGSLNVSVATGVILYEAV 265 Query: 240 RQRS 243 RQRS Sbjct: 266 RQRS 269 >UniRef50_Q7P601 23S rRNA methyltransferase n=10 Tax=Fusobacterium RepID=Q7P601_FUSNV Length = 234 Score = 249 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 77/236 (32%), Positives = 126/236 (53%), Gaps = 9/236 (3%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M +I GI+ V L + +++ G + + + L + + I ++ Sbjct: 1 MERII-GINPVTEALLNKEKNIEKLEFYNGLKGETVQKLKDLASKRNIKIFYTGKKI--- 56 Query: 61 KSDGAVHQGIIARVKPGRQY-QENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 QG+ + Y ++ + +A D+ +LILD + DP N GA +RSA+ Sbjct: 57 ----DNSQGVAVYISNYDYYKDFDEAYEELAEKDKSLVLILDEIQDPRNFGAIIRSAEVF 112 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 V +I+P+ S ++N T K + GA E V + +VTNL+ T+ L++ + W+ G AGEA Sbjct: 113 KVDLIIIPERNSVRINETVVKTSTGAIEYVNISKVTNLSDTINKLKKLDYWVYGAAGEAS 172 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 + + ++ LV+G EG G+R+ REHCD+LI IPM G ++SLNVSVA+GI L Sbjct: 173 INYNEENYSNKIILVLGNEGSGIRKKVREHCDKLIKIPMYGQINSLNVSVASGILL 228 >UniRef50_Q11YB9 tRNA/rRNA methyltransferase, TrmH family n=24 Tax=Bacteroidetes RepID=Q11YB9_CYTH3 Length = 268 Score = 249 bits (636), Expect = 8e-65, Method: Composition-based stats. Identities = 79/242 (32%), Positives = 125/242 (51%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +MI+GI V LE E ++ I + E + L V + + LD Sbjct: 23 KDMIFGIRPVIEALEAGKE-IDKILIQRNIEQAVVQELFELANRVKVPVIKVPVEKLDRV 81 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDL-IASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + HQG+I + +++ S P L++LD VTD N GA RSA+ G Sbjct: 82 TR-KNHQGVICYLSAINFASLDNIVSACFESGKNPLLVMLDRVTDVRNFGAVARSAECLG 140 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V A+IVP +AQLN+ A K + GA +P+ RV +L T++ L++ + I+ + +A Sbjct: 141 VDAMIVPSRGAAQLNSDAVKTSAGALYHIPVCRVDHLIDTVKYLKQCGLRIIACSEKASI 200 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +Y +T ++MG+E +G+ + D ++IPM+G ++SLNVSVATG+ L E R Sbjct: 201 NVYDEDLTDPCVILMGSEEDGISMDLLRYADAHVTIPMSGHINSLNVSVATGMILSEVTR 260 Query: 241 QR 242 QR Sbjct: 261 QR 262 >UniRef50_Q3A6R3 rRNA methyltranferase n=2 Tax=Desulfuromonadales RepID=Q3A6R3_PELCD Length = 246 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 99/245 (40%), Positives = 153/245 (62%), Gaps = 2/245 (0%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M +IYG++ V L+ + E+ +L G E RL + A ++ V I+ +R+ LD Sbjct: 1 MGSLIYGVNPVLEALKSRQRKPLELLVLHGAESSRLSAVCEAARARRVAIRSLDRRELDA 60 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIAS-LDQPFLLILDGVTDPHNLGACLRSADAA 119 ++GA HQG+ R++ DL DL + + +L+LDG+TDPHNLGA RSA+A Sbjct: 61 LAEGARHQGVALRLESQSVIALEDLLDLWRNAGGKGVILVLDGITDPHNLGALARSAEAV 120 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE-A 178 G +++PKDRS + A A+K + GA +P+ RVTN+AR++ + ++ W+ G AG+ Sbjct: 121 GCQGIVLPKDRSCPITAAAEKASAGALAYLPVCRVTNVARSLEVFKQAGFWVYGLAGDAG 180 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 +LY + + G + LV+G EG+G+R R+HCD L++IPM G VSSLN SVA G+ LFE Sbjct: 181 SQSLYDTDLRGNVVLVVGGEGKGLRDNVRKHCDALLAIPMRGQVSSLNASVAGGVALFEV 240 Query: 239 VRQRS 243 +RQ++ Sbjct: 241 LRQQT 245 >UniRef50_B3ETE6 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETE6_AMOA5 Length = 246 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 76/240 (31%), Positives = 125/240 (52%), Gaps = 3/240 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I+G AV + ++FI K ++ + +A+ + + L++ Sbjct: 7 IFGSKAVLEAILAGK-TIDKIFIDKDTKNADYQSIFNAIRYKQIPCSRVPVAKLNKLVPL 65 Query: 65 AVHQGIIARVKPGRQYQENDL-PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGI+A + P + + D + P ++ILDGVTD NLGA +R+A G HA Sbjct: 66 -NHQGIVALLSPVPLVTLSHIVQDTYEKGELPLIIILDGVTDVGNLGAIVRTAVCVGAHA 124 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +++PK SA L + A K + GA +P+ R NL ++ LQ + ++ + ++Y Sbjct: 125 LVLPKQGSASLGSGAMKTSAGALAHLPICREANLQASINYLQNSGLQVIACHEKTQTSIY 184 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 Q K+T A+++G+E +G++ D SIPM G +SSLNVSVA I L+E+ RQR+ Sbjct: 185 QVKLTVPTAILLGSEDKGIQPQLLNKVDVQASIPMVGPISSLNVSVAAAIILYESFRQRN 244 >UniRef50_A9KHD7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KHD7_CLOPH Length = 264 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 7/236 (2%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G + + + + ++V++ + + L+ G+ ++ + Q + E S+ Sbjct: 32 EGKKMFEEVASQQRNQIKKVYLAESYYHQYTKQNPEYLK--GLDFEVLSDQVMKEASETI 89 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QGI+A VK + S D LL+L+ + DP NLG +R+A+ G+ ++ Sbjct: 90 TPQGILAIVKQPIYT-----LKDMTSGDSIRLLLLEDIRDPGNLGTMVRTAEGVGMTGIV 144 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 + KD N + GA VP + + ++ E I I + + Sbjct: 145 LSKDSVDMFNPKVIRSTMGAIFRVPFFYAEDFYACLNQIKNEEIAIYAAHLQGAVWYDKV 204 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 G+ A+++G E G+ + I IPM G+V SLN ++A + ++E+ RQ Sbjct: 205 SYQGKSAILIGNEANGLSDKATSLSTQRIKIPMEGNVESLNAAIAAAVLMYESYRQ 260 >UniRef50_B6IRN7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Proteobacteria RepID=B6IRN7_RHOCS Length = 251 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 90/244 (36%), Positives = 129/244 (52%), Gaps = 5/244 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVV---IQLANRQYLD 59 +IYG+H V A R + +++ + + G+ ++ LD Sbjct: 9 NLIYGLHPVAAAWINPERRCRGLYVTESALAALDGA-VQRAAELGLERPDPTFLEKEELD 67 Query: 60 EK-SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 + GAVHQG+ P + D+ S Q +++LD VTDPHN+GA +RSA A Sbjct: 68 KLLPPGAVHQGVALDTAPLPEVAVEDVCIAAESEPQALVIVLDQVTDPHNVGAIMRSAAA 127 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G AVIV + + K A GA ++VPL+RVTNLAR + L++ W VG Sbjct: 128 FGARAVIVQDRHAPPVTGVLAKTASGAVDAVPLVRVTNLARALDTLKQAGFWTVGLDESG 187 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 L++ +TGR ALV+G+EGEG+RRLT E CDE+ +P G V SLNVS A + L+E Sbjct: 188 ARPLHEVDLTGRTALVLGSEGEGLRRLTGERCDEIARLPTGGPVGSLNVSNAAAVALYEV 247 Query: 239 VRQR 242 R+R Sbjct: 248 ARRR 251 >UniRef50_Q8EPH3 rRNA methylase n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPH3_OCEIH Length = 246 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 19/239 (7%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + +I GIH +Q L+ QE+ +++G E +++ V + + L E Sbjct: 27 TFLIDGIHLIQEALKSNW-VIQELIVVEGYELPN--------DAKDVPVAYVSENVLKEI 77 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 S QG+IA V+ + D +++LD + DP N+G +R+ADAAGV Sbjct: 78 SQTQTPQGVIAVVEMNIPKVQED---------NNLIILLDAIQDPGNMGTIIRTADAAGV 128 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AV++ N + G+ +P+ T L + + MLQ + I+ TA Sbjct: 129 DAVVLGDGCVDIFNDKVIRATQGSIFHIPIYTAT-LEQEIHMLQTQGFTILATALHDAVE 187 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + + ++ L++G EG G+ ++ I+IP+ G SLNV +A GI ++ + Sbjct: 188 YTEVSVHNKVGLILGNEGAGIAPSLLNKANQRINIPIYGKAESLNVGIAAGILMYHLKK 246 >UniRef50_UPI0001C42339 RNA methyltransferase, TrmH family n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C42339 Length = 281 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 64/233 (27%), Positives = 106/233 (45%), Gaps = 16/233 (6%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G H V+ L+ + + + + + I + + Q L E S+ Sbjct: 61 LIEGFHLVEEALKA-KFHIEVILMTEQTVLPLTWEVYEN------DIIIVSPQVLKEISE 113 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI A L L++D V DP N+G +R+ADAAG+ Sbjct: 114 TETPQGIAAVCAIPAPPSMTTL--------SGQFLLIDRVQDPGNIGTMIRTADAAGMTG 165 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ + N+ + + G+ +P+IR +L + L+E+NI + GT+ + Sbjct: 166 VVLGEGSVDLFNSKVIRASQGSIFHMPVIR-GSLIEWVEKLKEKNIPVFGTSLTEASSYT 224 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + AL++G EGEG++ E D+ I IP+ G SLNV+VATGI L+ Sbjct: 225 AIEPQPEFALIVGNEGEGVQSELLEGSDQNIYIPIYGQAESLNVAVATGILLY 277 >UniRef50_C8W818 RNA methyltransferase, TrmH family, group 3 n=7 Tax=Coriobacteriaceae RepID=C8W818_ATOPD Length = 338 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 78/241 (32%), Positives = 126/241 (52%), Gaps = 2/241 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVF-ILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 +++I G AV L + G++D+ + L LE +G+ ++ R LD Sbjct: 95 TDLIEGRRAVAEALTVGIPLKNALVQAASGQKDQEIEALARQLEQEGIPVERVARPVLDS 154 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 S HQG+I R +P +++ A +++LD VTD N GA +RSA+ G Sbjct: 155 LSSHGAHQGVIVRTQPFAYADLSEIIQR-AGSANALVVVLDHVTDEGNFGAIVRSAEVVG 213 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V++ R+A++ A K + GA +P+ +V+NL R + L+ W G+ A Sbjct: 214 AAGVVIANARAARVGVGAYKTSAGAVLHLPIAQVSNLPRALEELKAAGFWTCGSTEHATQ 273 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 +++++ M GRLALVMG+EG G+ RL E CD +P G V SLNV+ AT + +E +R Sbjct: 274 SVWEAPMGGRLALVMGSEGSGISRLMLEKCDFTCKLPQFGQVESLNVAQATTVMCYEWLR 333 Query: 241 Q 241 + Sbjct: 334 R 334 >UniRef50_Q6AJ92 Related to tRNA/rRNA methyltransferase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ92_DESPS Length = 295 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 82/246 (33%), Positives = 133/246 (54%), Gaps = 6/246 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++I+GIH + L+ P R E+ K R + ++ + V + + L Sbjct: 46 EDLIWGIHPIVEALKYEPNRISEIIAQKDRRGAKFDEIVELARAAKVKVTFIDSISLQGD 105 Query: 62 -SDGAVHQGIIARVKPGRQYQENDLP----DLIASLDQPFLLILDGVTDPHNLGACLRSA 116 + A HQG+IA+V D D + ++P +++ D + DPHNLGA +RSA Sbjct: 106 GAASARHQGVIAKVTQADLMDFADFLQKFKDAVDRGEKPRIIVCDSLQDPHNLGAIVRSA 165 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 A+G V++ ++RSA L TA K + GA + + +VTNL +++ L++ W+ G Sbjct: 166 LASGAIGVLLTRERSAPLGGTAAKSSAGAISHMDICQVTNLVKSLAELKKVGAWVFGAIK 225 Query: 177 EAD-HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 +AD +L+ + + +V+G+EG G+R L R CD +SIPM G + SLN SVA + L Sbjct: 226 DADAVSLFDADLNVPACIVVGSEGTGIRPLVRRECDIQLSIPMVGELDSLNSSVAAAVIL 285 Query: 236 FEAVRQ 241 FEA+RQ Sbjct: 286 FEAMRQ 291 >UniRef50_B7GPD2 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Bifidobacterium longum RepID=B7GPD2_BIFLI Length = 333 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 88/257 (34%), Positives = 133/257 (51%), Gaps = 16/257 (6%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S+++YG ++V L + + D R ++ G+ + A+R +D Sbjct: 71 SDLVYGRNSVLEALRVGVPSSTLYIMSRIEHDDRTREIVKIAGMNGLHMLEADRLEMDRI 130 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLD---------------QPFLLILDGVTDP 106 + HQG+I +V P + N+L D +P + LDGVTDP Sbjct: 131 ARSGNHQGVILKVDPFQYSSLNELADRAEKKAKAMEAANSAAARIAARPLFIALDGVTDP 190 Query: 107 HNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQE 166 NLGA +RSA A G + VI+P+ RSA +NA A KV+ GAA +P+ RV NL + + L+E Sbjct: 191 QNLGAVIRSAAAFGANGVILPERRSASVNAAAWKVSAGAAAHMPVARVVNLTKALEGLKE 250 Query: 167 ENIWIVGTAGEADHTLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSL 225 ++VG G D + ++ + L +V+G+EG G+ RL RE CD + IP++ SV SL Sbjct: 251 RGYYVVGLDGGGDKLVGETGFESDPLVVVLGSEGSGLGRLVRETCDAIAGIPISSSVESL 310 Query: 226 NVSVATGICLFEAVRQR 242 N SVA GI L+ R Sbjct: 311 NASVAAGISLYAVSNAR 327 >UniRef50_C7G6D1 RNA methyltransferase, TrmH family n=5 Tax=Clostridiales RepID=C7G6D1_9FIRM Length = 281 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 56/258 (21%), Positives = 102/258 (39%), Gaps = 31/258 (12%) Query: 6 YGIHAVQALLERAPERFQEVFILKGR---------------------EDKRLLPLIHALE 44 G E ++V++ + E+K ++ L Sbjct: 32 EGRKMFLEA---PVEWVKQVYVSESFYGTCTQGNMQDCMESCTPKHGEEKLNRKVLERLN 88 Query: 45 SQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVT 104 G ++ + SD QGI+ +K + + +Q LLIL+ + Sbjct: 89 ETG--YEIVSDNVFKSVSDTQTPQGILCVIKKPEYA-----LEELIKGEQTHLLILESIQ 141 Query: 105 DPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRML 164 DP NLG +R+ + AG+ VI+ + N + G+ VP +LA T+ L Sbjct: 142 DPGNLGTMVRTGEGAGITGVIMNQTTVDLFNPKTIRSTMGSIYRVPFFITKDLAGTISSL 201 Query: 165 QEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSS 224 +E+ + + + + + + A ++G EG G+ + D I IPM G V S Sbjct: 202 KEQQVNVYAAHLKGTLSYDEPDYKKKTAFLIGNEGNGLSDEIADLADTYIKIPMQGQVES 261 Query: 225 LNVSVATGICLFEAVRQR 242 LN +++ + ++E RQR Sbjct: 262 LNAAISASLLMYETGRQR 279 >UniRef50_B8DUY4 tRNA/rRNA methyltransferase n=5 Tax=Bifidobacterium RepID=B8DUY4_BIFA0 Length = 331 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 85/257 (33%), Positives = 134/257 (52%), Gaps = 18/257 (7%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDEK 61 +++ G ++V L +++ E D R ++ G+ + A+R +D Sbjct: 68 DLVIGRNSVLEALRVG-VPASVLYVANRIEHDDRTREIVRLAGQHGLNLLEADRLEMDRI 126 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ---------------PFLLILDGVTDP 106 + HQG+I + P + ++L + + P + LDG+TDP Sbjct: 127 ARSGNHQGVILKADPFQYSSLHELVERAERKARAMEMADSKASRLSARPLFIALDGITDP 186 Query: 107 HNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQE 166 NLGA +RSA A GV+ VI+P+ RSA +NA A KV+ GAA +P+ RV NL + + L+E Sbjct: 187 QNLGAVIRSAAAFGVNGVILPERRSASVNAAAWKVSAGAAAHMPIARVVNLTKAIEALKE 246 Query: 167 ENIWIVGTAGEADHTLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSL 225 + +G G + ++ T L +V+G+EG+G+ RLTRE CD + SIP+ +V SL Sbjct: 247 RGYYSIGLDGGGSKLVGETGFETDPLVVVLGSEGKGLSRLTREACDAIASIPITSAVESL 306 Query: 226 NVSVATGICLFEAVRQR 242 N SVA GI L+ V R Sbjct: 307 NASVAAGIALYATVNAR 323 >UniRef50_A5D0U2 rRNA methylases n=2 Tax=Peptococcaceae RepID=A5D0U2_PELTS Length = 270 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 113/241 (46%), Gaps = 4/241 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +I G+ V+ L A V+ + E +R L+ QGV + + E Sbjct: 26 KFLIEGVRFVEEALNSAWPVEMLVYCRRITETRRGEALLEKASFQGVPLVEVDESLFGEL 85 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + QG +A VK G+ L DL A + L+I+DGV DP NLG +RSA AAG Sbjct: 86 AGTTTPQGALAVVKKGKV----SLEDLQAGGEPALLVIVDGVQDPGNLGTIVRSAGAAGA 141 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+ K + NA A + GA VP+++ M L++ I V D Sbjct: 142 GGVILLKGTADIFNAKALRATMGAIFYVPVVQDVTSVEAMTYLKQLGIKAVAGDPRGDKL 201 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +Y +T ALV+G+E G E + IPM G SLNV+V++ + LFEAVRQ Sbjct: 202 IYDCDLTVPCALVLGSEAAGAGEPVLRMVAERVRIPMPGRAESLNVAVSSAVLLFEAVRQ 261 Query: 242 R 242 R Sbjct: 262 R 262 >UniRef50_B2KBE6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBE6_ELUMP Length = 249 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 76/236 (32%), Positives = 128/236 (54%), Gaps = 3/236 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKR-LLPLIHALESQGVVIQLANRQYLDEK 61 ++++G+HAV +++ R ++++L + R + I A + + I + + +D Sbjct: 6 DIVFGVHAVTEVIKNRKRRVIQLYVLDNKAGHRGIEDAIKAAKRNNIKIDRMDVKTMDAL 65 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + HQGI ARV+P + + D D+ + + +D +TDP NLG+ +RSA G Sbjct: 66 TKKGNHQGIAARVEPVKIMRLIDAIDVSRGNKKDLWIAVDEMTDPQNLGSIIRSAACLGF 125 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +I+P R+ L + KVA GA E V ++ V NLA + L++E WI G + Sbjct: 126 STIILPSRRTVGLTPSVYKVASGATEKVTVVEVANLATALLDLKDEGFWIYGADM-GGQS 184 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM-AGSVSSLNVSVATGICLF 236 + ++ + LV+G+EG G+R T EHCD+++SIP GSV SLN + A I +F Sbjct: 185 IVKTDYSFPAVLVVGSEGTGIREKTAEHCDQVVSIPQAPGSVDSLNAANAASIIMF 240 >UniRef50_A9WLY5 23S rRNA methyltransferase TrmH, group 3 n=11 Tax=Actinobacteria (class) RepID=A9WLY5_RENSM Length = 336 Score = 246 bits (629), Expect = 6e-64, Method: Composition-based stats. Identities = 85/251 (33%), Positives = 136/251 (54%), Gaps = 10/251 (3%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDE 60 EM+ G ++V L + ++I E D R+ ++ +G+ + ++ LD Sbjct: 76 EEMVTGRNSVVEALRAGI-PAKALYIAVRIEVDDRVKEVLKLASERGIPLMETHKPELDR 134 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASL-------DQPFLLILDGVTDPHNLGACL 113 +D AVHQG+ ++ P D+ + P ++ LDG+TDP NLGA + Sbjct: 135 MTDDAVHQGLALQIPPYDYPDAIDIAQETVDKFKKGYIKNSPLIVALDGITDPRNLGAII 194 Query: 114 RSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVG 173 RS A AVIVP+ RS L A+A K + GAA VP+ R NL R + + +++G Sbjct: 195 RSVSAFAGQAVIVPERRSVGLTASAWKTSAGAAVRVPVARAGNLNRALESFKGMGYFVLG 254 Query: 174 TAGEADHTLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATG 232 G+ D +L + + +V+G+EG+G+ RL RE+CD+++SIP+ ++ SLN S+A G Sbjct: 255 LDGDGDVSLPALAVAKEPVCIVVGSEGKGLSRLVRENCDQIVSIPIDSAMESLNASMAVG 314 Query: 233 ICLFEAVRQRS 243 I L+E RQRS Sbjct: 315 ITLYEIARQRS 325 >UniRef50_A5UYW3 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi (class) RepID=A5UYW3_ROSS1 Length = 252 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 88/245 (35%), Positives = 132/245 (53%), Gaps = 3/245 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGR-EDKRLLPLIHALESQGVVIQLANRQYLD 59 M +++YG +AV+ L FQ + + G E L ++ GV ++ +R+ LD Sbjct: 1 MPDLLYGRNAVREALRARRRTFQRLLVSAGAQETGTLGDIVRIAGEVGVPVERIDRRELD 60 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADA 118 + A HQG+ ND L +P FLL+LD + DP N+G LR+A+ Sbjct: 61 RRLRDANHQGVALECSDYPYVDLNDCLALAEERGEPAFLLLLDHIQDPQNVGTLLRTAEV 120 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT-AGE 177 GVH V++P R+A++ + GA E + + VTNLA T+ +Q +W+VG E Sbjct: 121 VGVHGVVIPGRRAAEVTPAVVNTSSGAVEHLRVAVVTNLAATIEQIQHAGVWVVGVEDDE 180 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 + + + LALV+GAEG G+ RLTRE CD L+ +PM G ++SLNV+VA I L+ Sbjct: 181 RAYEYDRVDLDLPLALVLGAEGPGLARLTRERCDFLVRLPMRGQIASLNVAVAGSIVLYH 240 Query: 238 AVRQR 242 A R R Sbjct: 241 AWRVR 245 >UniRef50_Q7MTU3 RNA methyltransferase, TrmH family n=5 Tax=Bacteria RepID=Q7MTU3_PORGI Length = 249 Score = 245 bits (628), Expect = 7e-64, Method: Composition-based stats. Identities = 81/241 (33%), Positives = 129/241 (53%), Gaps = 3/241 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +MI+G+H++ E E ++FI +G + ++ +I + V + + LD + Sbjct: 5 KMIFGLHSISEAFEAGKE-IDKIFIRRGLKTEQTEAIIREAVERCVPVMHVPIEKLDRLT 63 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 HQG++A + + + L ++ PFLL+LDG+TD N GA R+A+ AGV Sbjct: 64 S-KNHQGVVAILSAIEYTRLDQLMPMLYEEGKAPFLLLLDGITDVRNFGAIARTAECAGV 122 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 A+I+P+ S + A K + GA +P+ RVT++ +R LQE I IV + +A Sbjct: 123 DAIIIPERGSVSVGGDAIKTSAGALHRIPVCRVTSIPGAIRSLQEYGIRIVAASEKAADL 182 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 M L +VMGAE G T D +++IP G++ SLNVSVA GI ++E VRQ Sbjct: 183 YTDVPMKLPLGIVMGAEDVGPSPDTLRMADGIVAIPQMGAIGSLNVSVAAGIVIYEVVRQ 242 Query: 242 R 242 + Sbjct: 243 Q 243 >UniRef50_D1NAJ1 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAJ1_9BACT Length = 273 Score = 245 bits (628), Expect = 8e-64, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 105/240 (43%), Gaps = 6/240 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G + E E + F + + PL+ S+GV + L++ + Sbjct: 33 VLEGYRELTRAREYGMEIVEVFFAPEHFLGQNEFPLLETFASEGVKVCQVAPFLLEKMAY 92 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 +G+IA K R + L+ + V P NLG+ LRSADAAGV Sbjct: 93 RERPEGLIAIAKMKRHT-----LAEMPVRPNGLYLVAEAVEKPGNLGSMLRSADAAGVDG 147 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 I+ + N + + GA SVPL N L++ NI + D Sbjct: 148 FIICNKCTDIYNPNVIRASTGALFSVPLAEAEN-QEAYDWLKKNNIRTLAATPHTDQIYT 206 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 MT +A+V+G E G+ L EH D + IPM G + SLNV+ AT I L+EA RQR+ Sbjct: 207 DVDMTQAVAIVVGTEQTGLTELWMEHSDLPVRIPMLGKIDSLNVATATTILLYEAARQRN 266 >UniRef50_D2REE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Archaeoglobus profundus DSM 5631 RepID=D2REE3_ARCPR Length = 232 Score = 245 bits (627), Expect = 9e-64, Method: Composition-based stats. Identities = 67/235 (28%), Positives = 124/235 (52%), Gaps = 11/235 (4%) Query: 7 GIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAV 66 GI+ V L+ ++F+LK + R+ ++ + + + + L +++ Sbjct: 5 GINGVMEALKSGK--VNKIFVLKDATNPRIKEIVALAKKKKIPVVYTP--QLPKEA---- 56 Query: 67 HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIV 126 +G++A + P + + + D + F+L LD V DP N+GA +RSA+ G V++ Sbjct: 57 -RGVMAEISPIEYKEVDTIIDKCI-REGSFILFLDSVEDPQNMGAIMRSAEFFGCAGVVI 114 Query: 127 PKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSK 186 PK R Q+N T KV+ GA + + RV NLA ++ L++ I +VG + + L Sbjct: 115 PKRRCVQVNETVAKVSAGAVFHLDIARVENLANILKKLKKFGITVVGADLDGE-PLRNVD 173 Query: 187 MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 ++ LA+V+G E +G+ + ++ CD + I G ++SLN+SVA I ++E R+ Sbjct: 174 LSPPLAIVVGGEDKGLSKPVKKQCDFIAKIEGYGKINSLNLSVAGAIIMYEFRRR 228 >UniRef50_D1R5P1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5P1_9CHLA Length = 277 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 2/239 (0%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G + ++ + F + LI + G + + S Sbjct: 37 LIEGYRELLRAVDAGRKMETLFFCPELYLGTNEASLIQKIAKTGASLYQCTESVFKKLSY 96 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G+IA + P DL + + + PFL++ + + P NLG LR +DA G+ A Sbjct: 97 RDRPDGLIA-IAPQFHLSLEDLGKQLKNQNNPFLIVAEAIEKPGNLGTILRCSDAVGLDA 155 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +IV + N + + G +VP+I + A T++ L+++ I I+ A L Sbjct: 156 LIVCDACTDIHNPNVVRASVGTLFTVPVIE-SQGAETLQWLKQKGISILAATPHAKQELA 214 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 +TG LA+ +G E G+ E D + IPM G SLNV++AT I L+EA+RQR Sbjct: 215 DIDLTGPLAIAVGTEQLGLSPQWMEQADIQVRIPMYGIADSLNVAMATTILLYEALRQR 273 >UniRef50_C7PMX4 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PMX4_CHIPD Length = 263 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 75/242 (30%), Positives = 122/242 (50%), Gaps = 3/242 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S ++ G + ++ + +F+L+G + + + E + I L + L+ Sbjct: 22 SSLVIGRQPIVEAMKAGK-AIERIFMLRGATGEIIPQIRQLAEQYNIPINLVPVEKLNGL 80 Query: 62 SDGAVHQGIIARVKPGRQYQEND-LPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + A HQG +A D + + P LILDG+TD N+GA RSA G Sbjct: 81 TS-ANHQGCVAITGNINYLDLQDVISHVTEQGQTPLFLILDGITDVRNIGAIARSAVCCG 139 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 A+I+P A LN A K + GA E++ + RV +L + + L I ++ + EA+ Sbjct: 140 AQAIIIPDRGIAALNEEAIKSSAGALETISVCRVNSLLKAIDTLHLNGIKVIASEMEAET 199 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 LY ++ +A++MG+E +G+ + D L IPMAG+ S NVSVA GI L+EA++ Sbjct: 200 KLYDCQLQEPVAVIMGSEDKGVFPALIKASDTLFHIPMAGNFESFNVSVAAGIILYEAMK 259 Query: 241 QR 242 QR Sbjct: 260 QR 261 >UniRef50_A4E9D9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9D9_9ACTN Length = 302 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 115/239 (48%), Gaps = 1/239 (0%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E I G A L + G D L L+ L + GV I+ R LD S Sbjct: 56 EFIEGRRAAAEALRTGFPVKCALIAEGGERDAALSRLVDDLNAAGVRIKYVPRAQLDALS 115 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQGI V D+ D A +++LD VTD N GA +RSA+ G Sbjct: 116 SHGAHQGIALEVGNFPYADVADILDR-AGDGPALVVVLDHVTDDGNFGAIVRSAEVVGAA 174 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 VI+ R+A + + K + GA +P+ +V N+AR + L+ W+ G + A+ + Sbjct: 175 GVIIANKRAAGVTVGSYKTSAGAVMHLPIAQVPNIARALDDLKAAGFWVSGASERAEGSC 234 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + + GR+ALVMG+EG+G+ RL E CD L +P G SLNV+ AT FE +R+ Sbjct: 235 WDAPFEGRVALVMGSEGDGISRLVLEKCDFLTKLPQRGMTESLNVAQATTALCFEWLRR 293 >UniRef50_C4ZGM4 RNA methyltransferase, TrmH family, group 3 n=8 Tax=Clostridiales RepID=C4ZGM4_EUBR3 Length = 263 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 52/240 (21%), Positives = 96/240 (40%), Gaps = 12/240 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGR-EDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ G + V++ + D R ++ + S Sbjct: 30 VVEGPKMSFEA---PYDWVSAVYMSESFFNDDRFKEEKKRFLD---KTEIVSDSVFKSMS 83 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 D QG++A VK D + D+ LL+L+ + DP NLG +R+ + AGV Sbjct: 84 DTQTPQGVLAIVKMPHYE-----IDELFKGDKTELLVLESIQDPGNLGTMVRTGEGAGVS 138 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +I+ + N + G+ VP +L T+ + + + + + + Sbjct: 139 GIIMNRTTVDIFNPKTVRSTMGSLYRVPFYITDDLPETIEYAKSKGVSLYAAHLKGKCSY 198 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + TG ++G EG G+ + D I IPM G+V SLN +++ + ++E RQR Sbjct: 199 DRPDYTGACGFMIGNEGNGLSDEIADMADTYIRIPMEGAVESLNAAISATLLMYECNRQR 258 >UniRef50_C2D9C1 Possible tRNA/rRNA methyltransferase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D9C1_9ACTN Length = 372 Score = 244 bits (624), Expect = 2e-63, Method: Composition-based stats. Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 42/279 (15%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKG----REDKRLLPLIHALESQGVVIQLANRQYLD 59 MI G A LE +++ + + + + LI +G+ + + +D Sbjct: 90 MIEGRRACFEALEAH-LPLKKLLVQENMNAALQTADVERLITCARERGIACEYVKKSAMD 148 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASL--------------------------- 92 S HQG++ P + D+ I Sbjct: 149 SLSSHGAHQGVMFEAAPFAYAEFGDVLAAIDRKGARATDASAADASAADASAADAHELVT 208 Query: 93 ----------DQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVA 142 +++LD V D N GA +RSA+ G VI+ R A + A K + Sbjct: 209 NTDNQTAAHKQASLVVLLDHVVDEGNFGAIVRSAEVVGASCVIIANARCASVGVGAYKTS 268 Query: 143 CGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGM 202 GA +P+++V NLAR + L+E W++G + A T++ + TG++ L+MG+E G+ Sbjct: 269 AGAVLHMPIVQVVNLARAIDELKEHGFWVIGASEHAQQTVWDAPFTGKVCLIMGSEENGI 328 Query: 203 RRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L ++ CD + +P G + SLNV+ A + +E +RQ Sbjct: 329 SSLVQKKCDFICKLPQRGRIESLNVAQAATVMCYEWMRQ 367 >UniRef50_C9M6N6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6N6_9BACT Length = 278 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 3/238 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 + +G + LER+ E + V++ +G E + ++ ++ +R LD+ + Sbjct: 37 LCWGRNPSLEQLERSGESVERVWLARGVEAEFEAQVVRLAGR--TALERVDRLALDQMTG 94 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 GAVHQGI ++ + +DL D +A +++LD DPHNLG+ +R+A+AAG A Sbjct: 95 GAVHQGIALSLRRPDEVSLDDLLDQLAGG-PALVILLDRCQDPHNLGSVIRTAEAAGASA 153 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V+VPKDRS +L T K + GAA P+I V N+ R + L+E W+VG AGE+ L Sbjct: 154 VLVPKDRSVRLTGTVVKASAGAALRFPVISVVNVKRALDDLKEAGFWVVGLAGESSEPLG 213 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 + R L +GAEG G+ LTR+ CD L IPM+G SLN VA + +E R+ Sbjct: 214 KLAWDQRTVLAVGAEGTGLAELTRKSCDFLARIPMSGQAESLNAGVAAALGAYEWARR 271 >UniRef50_A8S2F6 Putative uncharacterized protein n=8 Tax=Clostridiales RepID=A8S2F6_9CLOT Length = 270 Score = 243 bits (622), Expect = 4e-63, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 101/241 (41%), Gaps = 10/241 (4%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++ G+ + L PE +++ + D + + + ++ Sbjct: 29 YVVEGLRMCREL---NPEDVDALYVTENFAGDADNRKWMGRFRP-----ETVSDVVMNVM 80 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 +D QG++A V+ R +D+ +++L+ + DP NLG +R+ + AG+ Sbjct: 81 ADTQTPQGVLAVVRQKRYT-MDDIVKPAPDGRSLAIMVLETIQDPGNLGTIIRAGEGAGI 139 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +++ D + N + G+ +P + +L +++ + + + + Sbjct: 140 TGIVMNHDTADIYNPKVIRSTMGSIFRMPFVYADDLQDACLLMKNRGVRLFAAHLKGMNN 199 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 Q T + ++G E G+ T D L+ IPM G V SLN ++A + +FE RQ Sbjct: 200 YDQEDYTDNVGFLIGNEANGLTEETTSLADCLVKIPMEGKVESLNAAIAASVLMFETARQ 259 Query: 242 R 242 R Sbjct: 260 R 260 >UniRef50_C4L451 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L451_EXISA Length = 248 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 20/238 (8%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G H V + ++ + + K L + + D S+ Sbjct: 31 LVEGEHLVDEAIRAGR--LVQLIMAESYSPKGTWRLEDM------PVLELSDHVADLLSE 82 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QG+ A VK +L+LD V DP NLG +R+ADAAG Sbjct: 83 TEKTQGVFAVVKMTPV-----------ERKMKKVLVLDRVQDPGNLGTMIRTADAAGFDT 131 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ K NA + G+ V + V +L + L+E+ + GTA + Sbjct: 132 VLLGKGTVDPFNAKVVRATQGSLFHVNVTSV-DLLEKLPELKEDGFHVYGTALSKATSYE 190 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 Q ++ALV+G E +G+ CD + IP+ G V SLN +VA GI ++ Q Sbjct: 191 QVAFEEKVALVIGNEAQGVHADVLALCDTRVHIPVLGDVESLNAAVAAGILMYRIALQ 248 >UniRef50_B1GZS4 23S rRNA (Guanosine-2'-O-)-methyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZS4_UNCTG Length = 255 Score = 243 bits (621), Expect = 5e-63, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 108/240 (45%), Gaps = 17/240 (7%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 + G + + + +++FI + ++ + L++ + + + + S Sbjct: 30 FVEGKKQIYEIPKN--RTIKQIFISEKYKND-----VTNLKN----VIMLSNHLFSKLSA 78 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI+A V+ E+ + + ++L+ + DP NLG +RSADA G A Sbjct: 79 TKSPQGIMAIVEKKYYAVEDII------KNSGLFILLENIQDPGNLGTIIRSADAFGAKA 132 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V V K + + + G+ +P+I N+ T+ +++ + I + + + + L Sbjct: 133 VFVSKGSADIYSDKTIRATMGSIFHLPIIDSINIKNTLNLMKNKKISVFAASLKGEKYLN 192 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 K + A V+G E G+R T D L+ I M G+ SLN + A I ++EA + R+ Sbjct: 193 DIKFPNKSAFVIGNEANGLRSETENSADTLVKIYMPGNTESLNAATAASIIMYEAAKNRT 252 >UniRef50_C0W229 tRNA/rRNA methyltransferase n=2 Tax=Actinomyces RepID=C0W229_9ACTO Length = 322 Score = 242 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 91/244 (37%), Positives = 137/244 (56%), Gaps = 3/244 (1%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +E+I G +AV ++ + VF+ D+R+ ++ + G + + L+ Sbjct: 78 NELIVGRNAVFEAVDAGID-IIRVFLAGNALDERIGKVVRTATALGAPVLEVTKMDLENA 136 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 S + HQ I V DL + + P ++ LD VTDPHNLGA LRS A G Sbjct: 137 SGESAHQSIGIEVPEYDYCSAQDLLERTKENAQIPLIVALDQVTDPHNLGAVLRSGGAFG 196 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 + V++ + RSA +NA A KV+ GAA VP+ R TNL R + L+E ++VG G D Sbjct: 197 ITGVLISERRSASVNAAAWKVSAGAAARVPVARETNLVRALGELKEAGCFVVGLDGGGDV 256 Query: 181 TLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 +L + TG L +V GAEG+G+ RL RE CD+++SIP++ +V SLN +VATGI L+E Sbjct: 257 SLRDLDLATGPLVVVTGAEGKGLSRLVRETCDQIVSIPISSAVESLNAAVATGIALYEVA 316 Query: 240 RQRS 243 +R+ Sbjct: 317 SKRA 320 >UniRef50_Q1IND6 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IND6_ACIBL Length = 285 Score = 242 bits (620), Expect = 6e-63, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 9/239 (3%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 + G+H ++ + F+ +F + ED R L+ + S V L + Sbjct: 54 VEGVHLLEEAIRSGLR-FKTIFFSQAAED-RAGKLLPQIHS-NVETLLLPDEVFSSAVLT 110 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAV 124 QG+ A VK + ++ DL + P LL + GV DP NLG LRSA+A G V Sbjct: 111 ESPQGVAALVK-LKTFKLEDLL----RAENPMLLGVAGVQDPGNLGTILRSAEAFGATGV 165 Query: 125 IVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQ 184 ++ ++ N + + G+ +P+++V A + L+ + + I+ T+ L + Sbjct: 166 LIGDKTASPWNPKVIRGSSGSVFRLPVVKVEWPA-ALEQLRAKGVQILATSSHKGEPLPE 224 Query: 185 SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 TG +++G EG G+ R D ++IP + V SLN +A I ++EA RQR+ Sbjct: 225 VDFTGPTIVLIGGEGAGVPRDVLASVDGTLAIPHSPKVESLNAGIAASIVMYEAARQRN 283 >UniRef50_D1I377 Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x (Fragment) n=3 Tax=Magnoliophyta RepID=D1I377_VITVI Length = 569 Score = 242 bits (619), Expect = 8e-63, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 20/257 (7%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGRE----------DKRLLPLIHALESQGVVI 50 + E IYG+ V A L F +++ +G + K ++ E G+ I Sbjct: 296 VGEGIYGVGPVLAALSAGRREFYALYVQEGLDLSGNNRKKKDKKGFEKVLKLAEKIGLSI 355 Query: 51 QLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQ-PFLLILDGVTDPHNL 109 + ++ L+ D HQG++ P + +L ++ ++ P + LD VTDP NL Sbjct: 356 KDLSKHDLNMVVDNRPHQGLVLDASPLEMVKIKELDPVLTEGEKGPLWVALDEVTDPQNL 415 Query: 110 GACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI 169 GA +RSA GV V++ SA L+ K + G+ E + L N+ + + E Sbjct: 416 GAIIRSAYFFGVSGVVLCAKNSAPLSGVVSKASAGSLELMELRFCKNMMQFLTSSAENGW 475 Query: 170 WIVGTAGEA-DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGS------V 222 ++G + L + LV+G+EG G+R L C +LI IP G+ V Sbjct: 476 QVLGGSVSPRAIPLNEISPGAPTILVLGSEGTGLRPLVERSCTQLIRIP--GNIPSFLAV 533 Query: 223 SSLNVSVATGICLFEAV 239 SLNVSVA G+ L V Sbjct: 534 ESLNVSVAAGVLLHHLV 550 >UniRef50_A5EVE3 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EVE3_DICNV Length = 242 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 95/239 (39%), Positives = 146/239 (61%), Gaps = 4/239 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 I GIHA++ L + + +G+ K L L+ ++ + I R Y+D + Sbjct: 5 WIGGIHALRQALNDGN--LLRLEVSEGKTSKNLASLVADAKAAQIEIITVPRHYIDHRLP 62 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGI + Q + I+ +++PF+L+LD + DPHNLGACLR+A AAGV A Sbjct: 63 DVRHQGIAGECRLSAQAS--NWQQAISGVERPFILVLDSIQDPHNLGACLRTAMAAGVDA 120 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++P +A + +K+ACGAAE++ + RV NL R + M++E+ +W+VG AGEA+ +L+ Sbjct: 121 VVLPNSCAADITPVVRKIACGAAEALAIFRVANLKREVEMMKEKGLWVVGGAGEAEKSLF 180 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 ++G L +++G E +G+ R+ CD L +IPMA ++ SLNVSVA GI LFEA RQR Sbjct: 181 DLDLSGGLVMIVGNEEKGIHYGLRQTCDWLAAIPMAETMESLNVSVACGIMLFEARRQR 239 >UniRef50_B3PM16 SpoU class tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM16_MYCA5 Length = 229 Score = 242 bits (618), Expect = 9e-63, Method: Composition-based stats. Identities = 67/241 (27%), Positives = 121/241 (50%), Gaps = 15/241 (6%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M +IYG ++V L+ ++++ KG +K + I+ + Q +++ Sbjct: 1 MKNLIYGKNSVLDALKAN-FPIAKIYLQKGLVNKAIT---------FKNIEYLSIQEMNQ 50 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 HQG IA + + Y + +L+LD + DPHN GA +R+A+ G Sbjct: 51 LVKNGNHQGYIAEIYNYQYYDLGTIF----KDKPNLVLMLDHIQDPHNFGAIIRNANGFG 106 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA-D 179 + +I+PK+R+ ++ T K++ GA + +IRV +L T++ LQ+ WI + + Sbjct: 107 IKHIIIPKNRACEVTPTVLKISSGAFTEIKIIRVGSLFDTLKELQKNGFWIYSSTLDDKA 166 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 L+++K L++G E G+ +H D L+ I G+V SLNV+ AT + L+EA Sbjct: 167 TKLHKTKFATPTCLIVGNEESGVSHTLIKHSDALVYIEQKGTVQSLNVASATAVLLYEAT 226 Query: 240 R 240 + Sbjct: 227 K 227 >UniRef50_B0K3L2 tRNA/rRNA methyltransferase (SpoU) n=11 Tax=Thermoanaerobacterales RepID=B0K3L2_THEPX Length = 254 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 56/239 (23%), Positives = 110/239 (46%), Gaps = 19/239 (7%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 + G +V L+ E + + + +G + + + I + + SD Sbjct: 30 FVEGTTSVLEALKSNFE-IEYIVMGEGVKID--------IPTGNFKIVHTTERVFKKISD 80 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 Q ++A +K + ++ + D + +I D + DP NLG +R+ADA G A Sbjct: 81 TVTPQMVMAIIKIPKYEEDTYIKD------KGIYIIADNIQDPGNLGTIIRTADAFGASA 134 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 + + N + + G+ +P+I ++ + L++ I + T +A ++ Sbjct: 135 IFTINNCVDVFNPKVLRASMGSIFHIPVI--VTASQILLKLKQRGIKVFATHLKARKLVH 192 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + ++ ++A V+G E +G+ + D+ + IPM G SLNVS+A GI L+E+ RQR Sbjct: 193 ECNISDKVAFVLGNEAKGVS--VVDLVDDFVKIPMTGEAESLNVSIAAGIFLYESQRQR 249 >UniRef50_C0BGA8 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BGA8_9BACT Length = 244 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 83/239 (34%), Positives = 121/239 (50%), Gaps = 3/239 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I+GI A+ +E V++LKG + K L+H L ++ + + LD S Sbjct: 7 IFGIRAILEAIESGK-SLDRVWLLKGTQSKLFEQLLHVLRNKNIAFSFVPVERLDRFSS- 64 Query: 65 AVHQGIIARVKPGRQYQENDLPD-LIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQG +AR+ L + ++ + P ++LDGVTD N GA LRSA A GV A Sbjct: 65 KNHQGAVARIGALSTQDMEPLIESVLKEKENPVFVLLDGVTDTRNFGAILRSAAATGVDA 124 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V + SA LN K + G A VP+ +V +L + L+ +I +G ++ TLY Sbjct: 125 VFISSTGSAPLNGDVVKTSAGGAFKVPISKVQHLKDVVYYLKAHDIPTLGITEKSTETLY 184 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 S + G LALV GAE G+ + D +PM +V SLNVSVA + +E +RQR Sbjct: 185 DSDLKGPLALVFGAEDVGISNGLLKILDHKAKLPMTEAVDSLNVSVACAVVFYETIRQR 243 >UniRef50_Q2GL62 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Anaplasma RepID=Q2GL62_ANAPZ Length = 258 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 8/240 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 IYG HA + L+ E+ I DK P+I +++ + I+ +D Sbjct: 11 WIYGKHACLSALKNPNRVCIELLITHKFIDKN-DPVIKLAKNRKIGIRDVEIAKIDSLVG 69 Query: 64 GAV-HQGIIARVKPG------RQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSA 116 HQG++ +V P + D+ + +L+LD VTD HN+GA LR+A Sbjct: 70 SKAIHQGMLLKVLPLFGRNASSLIRIEDIVAQTEAAPTSTILVLDEVTDVHNVGAVLRTA 129 Query: 117 DAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG 176 V AV++ + S + K + GA + VP++ + NL +T+ L+++N W G Sbjct: 130 ACFNVDAVVLTEHNSPSESCGMAKASSGAIDIVPVVCIGNLVKTLEYLKQKNYWCYGFDA 189 Query: 177 EADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 L+Q + + R +++GAEG+GMR LT++HCD L+ IPM+ + SLNVS A I ++ Sbjct: 190 SGGTCLHQVEFSERRVVILGAEGKGMRHLTKKHCDHLVKIPMSEKMESLNVSNAAAIAMY 249 >UniRef50_C2KW83 Possible RNA methyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KW83_9FIRM Length = 260 Score = 240 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 17/237 (7%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G LL+ ++++ + + L +E + I + +++ ++ S Sbjct: 34 EGERL---LLDLPASSLLQLYVQEDYKG----ALPRGIEKEDSRICILSKKAMESISTTE 86 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QGI+ ++ + LIL+ + DP NLG R+A+AAGV+ + Sbjct: 87 HGQGILGLLRFPK----------KEKPKGDLFLILENIQDPGNLGTLFRTAEAAGVNHIF 136 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 + ++ + + G+ +P +L L+ + + + T +Q+ Sbjct: 137 LSRNTVDPFSPKVVRSTMGSLFRLPFSIEEDLFFLCESLKSAGVQVFALDLDGKKTHFQA 196 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 G A + G EG G+ + + E + IPM G + SLNV+ + I L+EAVRQR Sbjct: 197 AFQGPSAFLFGNEGNGLTKELSQCATEKLLIPMEGKIESLNVATSASIVLYEAVRQR 253 >UniRef50_C9XLS4 Putative RNA methylase n=9 Tax=Clostridium RepID=C9XLS4_CLODC Length = 265 Score = 240 bits (613), Expect = 4e-62, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 8/240 (3%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKR-LLPLIHALESQGVVIQLANRQYLDE 60 +I G V LE VFI + E+K+ + L+ L+ + I + E Sbjct: 30 KFIIEGYRIVMLALEC-MANLDYVFINEEFENKKEHVKLLEDLDKKNTKIYKTTNKNFKE 88 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 D QGII V ++ + + F+LILD + DP N+G +R+AD+AG Sbjct: 89 LVDTENTQGIIGVVSFKKKKLSESI-----NKKDKFVLILDRIQDPGNMGTIIRTADSAG 143 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V A+I K N + G+ + +I + T+ ML+ + IV + ++ Sbjct: 144 VDAIIALKGCVDIYNPKVIRSTMGSIFDMNII-DASQDETVDMLKSLDFNIVSSYLNTEN 202 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + ++ALV+G E G+ D L+ IP+ G SLN ++++ I ++E + Sbjct: 203 FYDKIDYGSKVALVIGNEANGINEELVSKSDILVKIPIYGKAESLNAAISSAILMYEIKK 262 >UniRef50_Q5GSE7 RRNA methylases n=12 Tax=Rickettsiales RepID=Q5GSE7_WOLTR Length = 258 Score = 239 bits (612), Expect = 4e-62, Method: Composition-based stats. Identities = 78/241 (32%), Positives = 127/241 (52%), Gaps = 5/241 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE- 60 + +YG H L+ E+ + + + + ++S+G+ +QL + L E Sbjct: 9 NFWLYGKHTCMLALKNKNRLCIELLVTENSYREYEKEIRQCVDSKGIKVQLVKNKILSEV 68 Query: 61 KSDGAVHQGIIARVKP-GRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 S A HQGI +V P ++ + +S D ++ILD VTD HN+G+ LR++ Sbjct: 69 LSKSANHQGIALKVAPILHSLSIKEIAE--SSSDSSTIVILDQVTDTHNIGSILRTSACF 126 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 V A+++P + S NA+ K A G + VPLI VTN+ +TM L++ W G A Sbjct: 127 NVDALVLPYNHSPSENASIAKAASGTLDIVPLIHVTNVVKTMEYLKKVGYWCYGFDSNAK 186 Query: 180 HTLYQSK-MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + + K ++ ++ G+EG+GMRRL +E+CD L+ IPM+ + SLNVS A I L+ Sbjct: 187 ENIDEIKSFGKKIVIIFGSEGKGMRRLVKENCDYLLKIPMSNVIDSLNVSNAAAIGLYSV 246 Query: 239 V 239 Sbjct: 247 Y 247 >UniRef50_C0W457 tRNA/rRNA methyltransferase n=2 Tax=Actinomycetaceae RepID=C0W457_9ACTO Length = 330 Score = 239 bits (611), Expect = 6e-62, Method: Composition-based stats. Identities = 96/243 (39%), Positives = 129/243 (53%), Gaps = 4/243 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFIL-KGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E++ G +AV VF+ D RL ++ G + + L+ Sbjct: 83 EIVCGRNAVAEAARAG-VPISRVFMAVSAESDDRLGAVVRRATLIGCPVLETTKLDLEAL 141 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIAS-LDQPFLLILDGVTDPHNLGACLRSADAAG 120 +DGAVHQG+ V DL D + P L+ LD VTDPHNLGA LRS A G Sbjct: 142 TDGAVHQGVAIEVPAYGYTSALDLLDRARAVGHTPLLVALDQVTDPHNLGAVLRSTGAFG 201 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VI+P+ RS +NAT KV+ GAA VP+ R TNL RT+ L++E ++VG G + Sbjct: 202 GDGVIIPERRSVGVNATVWKVSAGAAARVPVARETNLVRTLETLKKEGCFVVGLDGGGET 261 Query: 181 TLYQSKMTG-RLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + + L LV GAEG G+ RL RE CD + SIP++ +V SLN +VATGI L+E Sbjct: 262 LMEDLSLADSPLVLVTGAEGAGLSRLVRETCDVIASIPISQTVESLNAAVATGISLYEVD 321 Query: 240 RQR 242 R R Sbjct: 322 RLR 324 >UniRef50_Q0AY01 23S rRNA methyltransferase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AY01_SYNWW Length = 264 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 57/239 (23%), Positives = 105/239 (43%), Gaps = 11/239 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G ++ L+ P+ +++FI + L + +++ + SD Sbjct: 31 LIEGKKMLEEALK-HPKLLRQIFI-EAELASEYTELYQQHPEW--ECYVVDKRLMKHISD 86 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 GI+A + +E L FLL LD + DP NLG +RS A GV Sbjct: 87 TETPPGIVALCQIPSWSREEFL------SQNAFLLYLDRIADPGNLGTIIRSGWALGVDG 140 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +++ + + + + G ++PL+ ++ ++ L++ + +A ++ Sbjct: 141 ILLSPESVDPFSPKVVRASMGGIFNIPLLLDFSVDE-LKRLKQNAYTFFCASLQARQEIF 199 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 TG L +G+E +G+R + E CD IP+ V SLN +VA I + EA +QR Sbjct: 200 SLDFTGPSLLAIGSESQGVRPVIEEICDFNCKIPIKPGVDSLNAAVACAIIINEAWKQR 258 >UniRef50_B8D292 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Halothermothrix orenii H 168 RepID=B8D292_HALOH Length = 270 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 9/240 (3%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++ G + RF +F+ I + + + L Sbjct: 30 KFILEGYRLIMEA--CGKARFDRIFMTPYFAKTDEGEEIIRKFKDHIPVHFVTGKLLYNV 87 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 +D QGI A + L + ++ +LILD + DP N+G +R+A AAG+ Sbjct: 88 ADTENPQGIAAI----TYVPRSGANILFHNRNRGIILILDRIQDPGNMGTIIRTAVAAGI 143 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE--NIWIVGTAGEAD 179 +I K N + + GA S+P++ + R ++ +++E + ++ T Sbjct: 144 EGIICLKGSVDIYNLKVIRASMGAIFSIPILTGVSFKR-LQKIRDEYPDYKLICTDLNTS 202 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 ++ L LV+G E G+R D I IP+ G++ SLN +V+T I L++ V Sbjct: 203 KFYHEIDYQEPLMLVIGNEARGIREELLSLADIKIKIPLMGNIDSLNAAVSTAIVLYDIV 262 >UniRef50_D1J7J9 tRNA/rRNA methyltransferase n=2 Tax=Mycoplasma RepID=D1J7J9_MYCHP Length = 230 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 69/238 (28%), Positives = 123/238 (51%), Gaps = 16/238 (6%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 M ++++G ++V +E +E+++ KG + L + + +R LD+ Sbjct: 1 MKKIVFGKNSVLEAIEY-EFPIEEIYLQKGLVNNNL---------KFKKVVYLDRNSLDK 50 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 ++ HQG A++K + + + +LILD + DP N GA +RSA+ G Sbjct: 51 LTENGNHQGYAAKLKDFQYHDLGSIF----KDGSDKVLILDHIQDPQNFGAIIRSANVFG 106 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EAD 179 +I+PKDR+ + + K + G ++V +I+V +L + L+ + WI +A + Sbjct: 107 FKHIIIPKDRACDVTPSVLKTSSGGFKNVKVIKVNSLFDAIEELKNKGFWIYASALNQQA 166 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM-AGSVSSLNVSVATGICLF 236 L +K ++A+++G EG G+ + +H DE+I I SV SLNVSVATGI L+ Sbjct: 167 KKLNDAKFNEKIAIIVGNEGSGVSKTLLKHSDEIIYIEQDKESVQSLNVSVATGILLY 224 >UniRef50_A0LPE7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LPE7_SYNFM Length = 252 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 80/239 (33%), Positives = 124/239 (51%), Gaps = 3/239 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 + G + V+ +L E+ + R D+R+ L+ +G+ + R L Sbjct: 13 WVSGFNPVREVLLTGRVEVLEMIVA--RSDQRVRELVELGALRGIAPRQETRDGLSALVG 70 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 A HQG+ R++ L + +P +ILD + DP NLGA LRSA G Sbjct: 71 HAHHQGVALRMREFPYAALEALLEKPTGEREPL-VILDCLQDPQNLGAMLRSACFLGARG 129 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VIVP+DRSA++ +T ++A GA +P+I+V NL R + L+E +WI G +A T+Y Sbjct: 130 VIVPRDRSARVTSTVIRIAAGATAYLPVIQVNNLVRALEQLKECGLWIFGLDAQAAQTIY 189 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + +T L LV+G E +G+R L CD ++ IP G + SLN + + I L E R+R Sbjct: 190 DADLTVPLGLVVGNEQKGLRPLVARACDAMVRIPEHGPLQSLNAATSGAIALAEVQRRR 248 >UniRef50_B4W2Z7 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W2Z7_9CYAN Length = 269 Score = 237 bits (605), Expect = 3e-61, Method: Composition-based stats. Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 7/244 (2%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 +YG V L ++ I + + +I +GV + + +Y+ S Sbjct: 16 VYGRKPVLEALSNPDIIIDKLLIANNARGEFIDEIIKQARQRGVKVSRESPKYITRISRN 75 Query: 65 AVH-QGIIARVKPGRQYQENDLPDLIASLDQP------FLLILDGVTDPHNLGACLRSAD 117 H QG++ V P + + S L LDGV +P N+G +R+ Sbjct: 76 GRHDQGVVVDVIPPAMEALSTYLERQQSHPPNQKPQTHKFLALDGVKNPSNVGMIIRTCL 135 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 AAG +I+P+ LN K + G A ++R L+ ++ L++ N I G +G Sbjct: 136 AAGFDGIILPRKGCPDLNPLVIKASAGTAFYTRVLRCAELSDALQQLRQANYTIYGLSGT 195 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 A TLY + V+G E EG+ R D +SIP+ SLNV+ A + FE Sbjct: 196 ATSTLYNLSFSPFSVFVLGNETEGINRDHHNLIDTWVSIPIEFPAESLNVASAAAVVCFE 255 Query: 238 AVRQ 241 RQ Sbjct: 256 LKRQ 259 >UniRef50_C0WU39 RNA methyltransferase n=3 Tax=Lactobacillus RepID=C0WU39_LACBU Length = 255 Score = 237 bits (605), Expect = 4e-61, Method: Composition-based stats. Identities = 64/240 (26%), Positives = 103/240 (42%), Gaps = 14/240 (5%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +I G H V ++ ++ V + D L + ++ L + Sbjct: 29 QYIIEGWHIVDEAIKHD-QQIDAVIVT----DANFLDQLE-VDPAVTDTYLITPEVAKHI 82 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 S QG+ A + + + I L+LD + DP N+G +R+ADAAG+ Sbjct: 83 SATETPQGVFAVLTTENYH------ESIPEKLGGSWLMLDNIQDPGNIGTMVRTADAAGM 136 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADH 180 + VI K + N + G+ V L +LA M + N+ + GT + Sbjct: 137 NGVIFGKGTADIYNPKVVRSMQGSQFHVRLYS-GDLAVWMAAFNKHNVPVYGTELNDQAI 195 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + + T + ALVMG EG G+ + D+ + IPM G SLNV+VATGI +F V+ Sbjct: 196 SYDDVEPTKQFALVMGNEGNGVSADLLDKTDQNLYIPMNGEAESLNVAVATGILIFHFVK 255 >UniRef50_D1AU26 RNA methyltransferase n=1 Tax=Anaplasma centrale str. Israel RepID=D1AU26_ANACI Length = 262 Score = 236 bits (604), Expect = 4e-61, Method: Composition-based stats. Identities = 79/244 (32%), Positives = 126/244 (51%), Gaps = 7/244 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK-- 61 I G H + L+ +E+ + K+ + +++G+ + + + + Sbjct: 12 WICGRHVCISALQNPNRVCRELLVTGEFL-KKHPEVARMAQNKGIRPRRVAAEEIGKIWG 70 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPF----LLILDGVTDPHNLGACLRSAD 117 VHQGI RV + L F +++LD VTD +N+GA +RSA Sbjct: 71 HGRTVHQGIALRVGKLFGRDGDKLRVEDIVSGSAFTASTVVLLDQVTDINNVGAIVRSAA 130 Query: 118 AAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE 177 V AVI+P+ S N +V+ GAA+ VP++RV NL +TM L++ W G + Sbjct: 131 CFDVDAVILPEHHSPSENCIITRVSSGAADLVPVVRVGNLVKTMEYLKQNGYWCYGMDVD 190 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 D L++ R A+++G+EG+G+RRLTREHCD L+ IPM+ ++SLNVS A I L+ Sbjct: 191 GDKALHEISFCERRAIILGSEGKGIRRLTREHCDHLVKIPMSARINSLNVSNAAAIVLYS 250 Query: 238 AVRQ 241 + Q Sbjct: 251 SYLQ 254 >UniRef50_UPI0001C31319 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31319 Length = 256 Score = 236 bits (604), Expect = 5e-61, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 122/241 (50%), Gaps = 8/241 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVF-ILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++YG +AV L Q ++ E+ L + H + V + +A+ +++ +S Sbjct: 21 ILYGRNAVHEALR-GSREVQHIWATAHAVEEPWLAAVAHDASAVDVNV-VADGGWIERRS 78 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG+ A+V P R ++L + + P ++ LD + DP NLGA R+A+ AG Sbjct: 79 GSPDHQGVCAQVAPFRYAYVDELLAV----EHPLIVALDEIQDPQNLGAIARTAECAGAT 134 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +++P RSA + K + GA E +P+ R NLA + + W+ G G+ Sbjct: 135 GLVIPARRSADVTPAVCKASAGAVEHLPIARARNLADFLGDARGVGAWVYGAEGDGGVPY 194 Query: 183 YQSKMTGR-LALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 +G + LV+G+EG G+R CD LI++P+ G + SLNVS A L+E VRQ Sbjct: 195 TGVDYSGPGVVLVLGSEGRGLRPRVAASCDALIALPLRGRIGSLNVSAAASALLYEIVRQ 254 Query: 242 R 242 R Sbjct: 255 R 255 >UniRef50_A8LF93 RNA methyltransferase, TrmH family, group 3 n=16 Tax=Bacteria RepID=A8LF93_FRASN Length = 386 Score = 236 bits (603), Expect = 5e-61, Method: Composition-based stats. Identities = 88/238 (36%), Positives = 127/238 (53%), Gaps = 3/238 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDEK 61 E++ G +AV L ++I G + D+R+ G+ + R LD Sbjct: 140 ELVVGRNAVVEALRAG-VPATTLYIAGGLDFDERIADARRLAGRAGLAVVDIGRFELDRL 198 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 A HQG+ V P +D+ + ++ LDGVTDP NLGA +RSA A G Sbjct: 199 CGTAPHQGLALSVPPFEYAHPDDVLAAAQAAAPGLVVALDGVTDPRNLGAVVRSAAAFGA 258 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 V+VP+ R+A + A A K + GAA +P+ R NL RT+R E +++VG A + + + Sbjct: 259 SGVVVPERRAAGVTAAAWKTSAGAAARLPVARAVNLTRTLRSFAESGLFVVGLAADGEVS 318 Query: 182 LYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 L + ++ T L LV+G+EG+G+ RL E CD + IPMAG V SLN VATGI L E Sbjct: 319 LDELQVATDPLVLVIGSEGKGLSRLVGECCDLRVRIPMAGQVESLNAGVATGIALSEI 376 >UniRef50_A4XKC2 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Clostridia RepID=A4XKC2_CALS8 Length = 271 Score = 236 bits (603), Expect = 6e-61, Method: Composition-based stats. Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 11/242 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKR---LLPLIHALESQGVV-IQLANRQYLD 59 ++ G+ AV+ L+ A E + + K I L S + I + + Sbjct: 37 LVEGVKAVKEALDYAIEDINLLIFSQEASKKYEEFFSRCISLLNSGKLKRIVQVPEKIFE 96 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 S QG++A +L ++++D V DP NLG +R ADA Sbjct: 97 HISTTTTPQGVLAECSFFD-------KELDVLKKHNRVVVIDSVQDPGNLGTIIRCADAF 149 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD 179 G VI N + A G+ V ++R + L + + T D Sbjct: 150 GFECVITVNGTVDVYNPKVVRSAMGSMFHVDVVRERKKEEVLEALNKRGFALYVTTPYGD 209 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + + + R A+V+G E +G+ E+ + + I M G SLN +VA I L+E Sbjct: 210 VDISKLSVDDRFAIVIGNESKGVDVAFLENATKKVKISMPGKAESLNSAVAAAIVLYELR 269 Query: 240 RQ 241 ++ Sbjct: 270 KK 271 >UniRef50_B9KYY7 RNA methyltransferase, TrmH family, group 3 n=4 Tax=Chloroflexi RepID=B9KYY7_THERP Length = 261 Score = 235 bits (602), Expect = 7e-61, Method: Composition-based stats. Identities = 78/242 (32%), Positives = 124/242 (51%), Gaps = 6/242 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDE 60 SE +YG +AV L R + +F+ G E R++ L+ A +G+ + + R LD Sbjct: 10 SEYLYGRNAVAEALRG-RRRHRRLFVASGIETHGRIVALMEAARVRGIPVIVIPRSELDR 68 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 HQG++ P L D + +L+LD + DP N+ LR+A+AAG Sbjct: 69 MVGSVNHQGVVLETSPYPYVDFATLLD---PAPESIVLLLDHLQDPQNIATLLRTAEAAG 125 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE-AD 179 V V++P+ R+A + + GA E + + VTNLAR + L+E WIV Sbjct: 126 VRGVVLPERRAAGITPAVVNASAGAVEHLQITLVTNLARAVDTLREHGYWIVALEPGPNA 185 Query: 180 HTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 +L+++ + L L++GAEG G+ + + D + IPM G + SLN +VA I L+E V Sbjct: 186 QSLFRAPLPLPLVLLVGAEGHGLSPVLLKRADVQVIIPMLGQIESLNAAVAGSIALYEIV 245 Query: 240 RQ 241 R+ Sbjct: 246 RR 247 >UniRef50_D1B9Y1 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9Y1_THEAS Length = 256 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 85/241 (35%), Positives = 139/241 (57%), Gaps = 5/241 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +++YG + V +LLE + +V I + R D ++ ++G+ Q + + LD Sbjct: 11 DLVYGRNPVMSLLEGGGD-CLKVLISRRRSDPVRERIVEICRARGIPFQEVDGKVLDRMV 69 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPF---LLILDGVTDPHNLGACLRSADAA 119 + HQG++ARV P + DL L + D LL++D V DPHNLGA +R+A+AA Sbjct: 70 GTSSHQGVVARVSPVGILKLEDLYRLAGASDPVAAFALLVVDHVEDPHNLGAMIRTAEAA 129 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE-NIWIVGTAGEA 178 G AV+ P R A K + GAA VPLI V N+++ +R ++E+ +W VG + Sbjct: 130 GFSAVLFPSRREALPTGVVVKASAGAALRVPLIMVGNVSQAIRRVKEDLGLWAVGLEAQG 189 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 +++ ++ R+ALV+G+EG+G+ R+ CD+++ IPM G+ SLNVSVA GI +++ Sbjct: 190 RASVFDERLPPRIALVVGSEGKGLSRVASAACDDILMIPMMGASGSLNVSVAAGIVMYQW 249 Query: 239 V 239 Sbjct: 250 Y 250 >UniRef50_A9GVZ1 tRNA/rRNA methyltransferase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GVZ1_SORC5 Length = 248 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 80/244 (32%), Positives = 119/244 (48%), Gaps = 3/244 (1%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDE 60 MS ++YG+ V+ + R V + + +L L E QG+ + A R LD Sbjct: 1 MSRLVYGLQPVREAIRAHGARVGWVLVQRD-GGPKLDALARLAEGQGIPTERAPRNELDR 59 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP--FLLILDGVTDPHNLGACLRSADA 118 +S G HQG +A + +++P + + LDGV DP N GA +RSA A Sbjct: 60 RSAGGRHQGAVASAPELQIVGVDEIPVVEEGQPGAGTITVALDGVMDPQNFGAVIRSAVA 119 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA 178 G A++ P+ SA L + + GA E L RV +L + L + + + Sbjct: 120 LGARAILWPEHSSAPLTPATFRASAGAIEHARLCRVPSLPDALEALAARGVAAIALDAQG 179 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 L + +TG +A+V+GAE +G RR R C + +PM G +SSLN SVA I L+E Sbjct: 180 PVELGELPLTGPVAIVIGAEDKGTRRSVRRVCQHVARLPMTGPISSLNASVAGAIALYEV 239 Query: 239 VRQR 242 VRQR Sbjct: 240 VRQR 243 >UniRef50_Q2ST10 RNA methyltransferase, TrmH family, group 3 n=5 Tax=Mollicutes RepID=Q2ST10_MYCCT Length = 244 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 58/239 (24%), Positives = 119/239 (49%), Gaps = 8/239 (3%) Query: 1 MS-EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLD 59 M+ +IYG H + LL++ +E+++ + L++ + I + + LD Sbjct: 1 MNHNLIYGKHVIYELLKKHKNMVKEIWVKNLKLLDEFD-----LKNTKIKINVVSENKLD 55 Query: 60 EKSDG-AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADA 118 + +HQGIIA++K ++L + + + ++ +L+LD + DP+N GA +RS Sbjct: 56 QLLKTNELHQGIIAQIKDFNYTPFDELLNDLNTKEKSLVLVLDQIHDPYNFGAIIRSCSL 115 Query: 119 AGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-E 177 V +I+ + Q+N+T K + G+A + + + NL +++L+ WI T + Sbjct: 116 LNVDGIIILDKKQVQVNSTVLKTSSGSAFDIKISKTNNLNNAIKILKNNGFWIYATNLNQ 175 Query: 178 ADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + +++ + +++G E +G+ L ++ D I +P ++ S N SVA I F Sbjct: 176 NSTDMTKTQFANKSVVIIGNEQKGVSELLTKNSDFNIYVPSNKNIDSFNASVACSIICF 234 >UniRef50_D2RCJ3 RNA methyltransferase, TrmH family, group 3 n=14 Tax=Actinobacteridae RepID=D2RCJ3_GARVA Length = 331 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 88/256 (34%), Positives = 133/256 (51%), Gaps = 16/256 (6%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 E++ G +A L Q + D R ++ QG+ + A+R +D + Sbjct: 68 ELVIGRNAALEALRVGVPSTQLYVANRIEHDDRTREIVKLAGMQGLRLLEADRLEMDRIA 127 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQ---------------PFLLILDGVTDPH 107 HQGII +V+P + + +L + + P + LDGVTDP Sbjct: 128 HSTNHQGIIVKVQPYQYHSLQELVERAEKKARAMEAADSDSARINARPLFIALDGVTDPQ 187 Query: 108 NLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEE 167 NLGA +RSA A G + VI+P+ RSA + A A KV+ GAA +P+ RV NL + ++ L+E Sbjct: 188 NLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHLPVARVVNLNKAIQGLRER 247 Query: 168 NIWIVGTAGEADHTLYQSKM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLN 226 + +G G D + ++ T L +V+G+EG+GM RLTRE CD + IP++ +V SLN Sbjct: 248 GWYAIGLDGGGDKLVGETGFETDPLVVVLGSEGKGMSRLTREACDAIAGIPISSAVESLN 307 Query: 227 VSVATGICLFEAVRQR 242 SVA GI L+ R Sbjct: 308 ASVAAGISLYAVANAR 323 >UniRef50_C2KTT3 TrmH family tRNA/rRNA methyltransferase n=2 Tax=Mobiluncus mulieris RepID=C2KTT3_9ACTO Length = 354 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 91/289 (31%), Positives = 139/289 (48%), Gaps = 50/289 (17%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGR-EDKRLLPLIHALESQGVVIQLANRQYLDEK 61 E+I+G + V F+ +F+ +D +L ++ + GV ++ + LD Sbjct: 67 ELIFGRNPVSEAAVAG-VPFKRLFVASTIMKDPKLAKVVERASASGVPLRECSAADLDRL 125 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLI-------------------------------- 89 ++G VHQGI A + + +L DL Sbjct: 126 TEGGVHQGIAAELCAYQYLDVMELWDLAVARAEAAGCAASAGCAVVSPAVHEVPSGVLGE 185 Query: 90 ---------------ASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQL 134 P L+ LD VTDPHNLGA LRSA A G VI+P+ R+A + Sbjct: 186 TPKSDLAPHETVATKPPTHPPLLVALDQVTDPHNLGAVLRSAAAFGADGVIIPEHRAASV 245 Query: 135 NATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTG-RLAL 193 NA A KV+ GAA VP+ + TNL R ++ L+ +++G G D L ++T L + Sbjct: 246 NAAAWKVSAGAAAIVPVAQATNLTRALQDLKRAGAFVIGLDGGGDVALPDLQLTDVPLVV 305 Query: 194 VMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 V G+EG G+ RL R+ CD+++SIP+A + SLN +VATGI L++ +R Sbjct: 306 VTGSEGRGISRLVRDTCDQIVSIPIAPRMESLNAAVATGIALYQIAVRR 354 >UniRef50_B5YIM1 RNA methyltransferase, TrmH family n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIM1_THEYD Length = 261 Score = 234 bits (598), Expect = 2e-60, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 109/237 (45%), Gaps = 9/237 (3%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G+H V+ L ++VF+ + +K+ + L+ + + + + + + SD Sbjct: 29 EGVHLVETSLVSDYVFTEKVFVTEKFIEKQ-KNFLEILQEKKIPVIIISEKVAKTISDTV 87 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QG+ A + ++ + F++I D + DP N+G +R+A+A G AV+ Sbjct: 88 TPQGVFAIAD-------FKIKNINDLSNPTFIVIADRIQDPGNIGTIIRAAEAFGAEAVL 140 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 V + A + + G+ +P+I+VT + + + + +V T +A + + Sbjct: 141 VTHGTCNPFSNKALRASAGSIFFLPVIKVT-VKEIEEFVSKYGLNLVITDLKATISSFNM 199 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 T LA+V G E +G+ + R IP G SLNV++A L+E +RQR Sbjct: 200 DFTKPLAIVFGNESKGVSQDLRAIKHTSCKIPHKGKAESLNVAMAATAILYEILRQR 256 >UniRef50_Q6MA83 Putative rRNA methylase n=2 Tax=Chlamydiae/Verrucomicrobia group RepID=Q6MA83_PARUW Length = 265 Score = 232 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 2/241 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + +I G + + E LI L S+G + + + + Sbjct: 23 TFLIEGYRELLRAADADWEVNLLFICPALFLGMNEPTLIERLTSRGTELFYCSEKVFRKI 82 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 S G++A + P R +DL PF ++ + + P NLG LRS+DA G+ Sbjct: 83 SYRDRPDGLLA-IAPQRHLTLDDLSLKTKKPMAPFFVVAEAIEKPGNLGTILRSSDAVGI 141 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +IV + N + + G +VP + + L ++ I I+ A+ Sbjct: 142 DGLIVCDRCTDIYNPNVVRASVGTLFTVPTVEAR-GEDILLWLNKQGIDILAATPHAEKE 200 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 Q +T +A+ +G E G+ + + IPM G SLNV++AT + L+E +RQ Sbjct: 201 FTQVDLTSPVAIAVGTEQLGLSERWMKQATMQVRIPMMGVADSLNVAMATTLLLYEVLRQ 260 Query: 242 R 242 R Sbjct: 261 R 261 >UniRef50_C4V3B4 TrmH family rRNA methyltransferase n=2 Tax=Selenomonas RepID=C4V3B4_9FIRM Length = 276 Score = 232 bits (594), Expect = 6e-60, Method: Composition-based stats. Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 4/240 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 + G+ + ++ V + +R+ L+ L ++ + I + + S+ Sbjct: 35 FVEGLRLAEMAVQSNWAILHAVVTEHAMKMERMQLLLTKLSARNIPIASVSERLFSACSE 94 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGII ++ ++ + L P L LD V DP N+G LR+ADAAG Sbjct: 95 TDSPQGIILLLQRLPCTPLEEMVQVTEGL--PLYLALDRVQDPGNVGTILRTADAAGASG 152 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD-HTL 182 VI+ + + + + A G+ +P + + +R +E + A + D T Sbjct: 153 VILLRGCADVYGSKVVRAAMGSLFYLPFVTGVDEEDLVRFAKENVLCFYAAACDTDGVTH 212 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + ++++ +V+G E G+ + + +PM G SLNV+ A L+EA+RQR Sbjct: 213 FAAELSRPSLVVLGNEANGVSERLLR-AGQHLYVPMCGRAESLNVAAAATAILYEAIRQR 271 >UniRef50_B1AIB3 RNA methyltransferase, TrmH family, group 3 n=15 Tax=Ureaplasma RepID=B1AIB3_UREP2 Length = 239 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 64/234 (27%), Positives = 105/234 (44%), Gaps = 8/234 (3%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 +G A+ + + +V++L LI+ + + ++ N + + Sbjct: 5 FGKKALLDAIGN-KQSISKVYLLSKNY-----ELINLINKNKITYEIVNEAWFKQFDHSL 58 Query: 66 VHQGII--ARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQ I K ++ LI +LILD + DP N GA +R+A+ GV A Sbjct: 59 NHQNIAFKLVKKNFQKTSLESFLKLIKDKKNALVLILDEIEDPRNFGAIIRTANGFGVDA 118 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +I K A +N K + GA + +I V NL+ T++ LQ+E W+ T+ Sbjct: 119 IIYKKHHQASINDLVIKTSMGAINYIYMIEVNNLSNTIKNLQDEGFWVYATSLLKSQPYE 178 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE 237 + + ++G E +G+ L ++ D+ I I M G V SLNV VATGI L Sbjct: 179 KVDYANKTVFIVGNENKGVSPLILKNADQSIRIDMFGDVQSLNVGVATGIILAH 232 >UniRef50_C9KPX8 RNA methyltransferase, TrmH family n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KPX8_9FIRM Length = 271 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 57/240 (23%), Positives = 98/240 (40%), Gaps = 4/240 (1%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 I G+ + + ++ + E +R L+ AL+++ + + + Sbjct: 31 IEGVRLSEMVAASGWAIRFGLYTAELVEKERGRALVEALQAK-CPLYEIGAALAKKVAAT 89 Query: 65 AVHQGIIARVKPGRQYQENDLPDLI-ASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI + ++ L A+ +P L++LDGV DP N G +R+ADA G Sbjct: 90 DTPQGIFLVAEQQKKSLPQMAEHLQQAAARKPLLVVLDGVQDPGNAGTIIRTADAVGADG 149 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADHTL 182 VI+ K + + G+ +P++ + Q ++ TA E Sbjct: 150 VILTKGSVDVFSDKTVRATMGSLFHLPVVTDVSAEEVATFAQAAGCQLLATALDEQAKPH 209 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + G EG G+ E + IPM G SLNV V++ + L+EAVRQR Sbjct: 210 FAVDFGKGSLIAFGNEGGGVSEELLAAA-EKVYIPMYGEAESLNVGVSSAVVLYEAVRQR 268 >UniRef50_A1KPR5 Uncharacterized tRNA/rRNA methyltransferase BCG_3644c n=102 Tax=Actinobacteridae RepID=Y3644_MYCBP Length = 322 Score = 231 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 81/235 (34%), Positives = 122/235 (51%), Gaps = 2/235 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDE 60 +E + G + V L +++ G E D+RL + G+ I R LD Sbjct: 67 TETVLGRNPVLECLRAG-VPATALYVALGTEADERLTECVARAADSGIAIVELLRADLDR 125 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + +HQGI +V P +DL L+ LD ++DP NLGA +RS A G Sbjct: 126 MTANHLHQGIALQVPPYNYAHPDDLLAAALDQPPALLVALDNLSDPRNLGAIVRSVAAFG 185 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 H V++P+ RSA + A A + + GAA +P+ R TNL RT++ + + ++G Sbjct: 186 GHGVLIPQRRSASVTAVAWRTSAGAAARIPVARATNLTRTLKGWADRGVRVIGLDAGGGT 245 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 L T L +V+G+EG+G+ RL R++CDE++SIPMA SLN SVA G+ L Sbjct: 246 ALDDVDGTDSLVVVVGSEGKGLSRLVRQNCDEVVSIPMAAQAESLNASVAAGVVL 300 >UniRef50_C5WEU6 23S rRNA methyltransferase n=2 Tax=Firmicutes RepID=C5WEU6_STRDG Length = 245 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 69/236 (29%), Positives = 105/236 (44%), Gaps = 20/236 (8%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S +I G H + + + F+ +F+L+ L + Q + L + L E Sbjct: 26 SYLIEGWHLFEEAQQSG-QGFRHIFVLE--------ELAERVADQE-KVVLVSADVLKEL 75 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 +D QGIIA V + D Q LIL+ V DP NLG +R+ADAAG Sbjct: 76 TDSPSPQGIIAEVDMPQLAFPTDY--------QGKYLILEDVQDPGNLGTIIRTADAAGF 127 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA-DH 180 V + + + N+ + G+ +P+ R T++ + R +QE N ++ T Sbjct: 128 DGVFLSEKSADVYNSKTLRSMQGSHFHLPIWR-TDIYKICREMQEHNTPVLATTLSKVSV 186 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 ALVMG EG+G+ D+L+ I M G SLNV+VA GI +F Sbjct: 187 DYKTVPHQESFALVMGNEGQGISAEMTTLADQLVHITMPGQAESLNVAVAAGILIF 242 >UniRef50_B1ZVF9 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Opitutaceae RepID=B1ZVF9_OPITP Length = 296 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 74/265 (27%), Positives = 118/265 (44%), Gaps = 27/265 (10%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G ++ LE+ + + + + LI E+ G + + + + Sbjct: 33 LIEGFREIRRALEKRVPLRELYYAPEWFLGENEPALIAQAEAAGAQLFELTKSAFAKVAY 92 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIAS-------------------------LDQPFLL 98 G++A P + DL ++A PF+L Sbjct: 93 RERPDGLLAVA-PQWKRTLQDLDKIVAGSGGPGRPGSTTPATTSAVGAGAPDLQRAPFIL 151 Query: 99 ILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLA 158 +++ + P NLG LRSADAAG AVIV + N + + G SVPL+ V A Sbjct: 152 VVEAIEKPGNLGTILRSADAAGCDAVIVCDPVTDIFNPNVVRASTGVLFSVPLV-VAESA 210 Query: 159 RTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM 218 + L+ + + + T A+ + + G LA+VMG+E G+ ++CD + IPM Sbjct: 211 PVLAWLRAQGVRTIATTPAAEKLYTDADLRGPLAIVMGSEQYGLSEFWLKNCDLPVRIPM 270 Query: 219 AGSVSSLNVSVATGICLFEAVRQRS 243 AG SLNV++AT I LFEAVRQR+ Sbjct: 271 AGQADSLNVAMATIITLFEAVRQRA 295 >UniRef50_C5SHP3 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Caulobacteraceae RepID=C5SHP3_9CAUL Length = 322 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 90/248 (36%), Positives = 126/248 (50%), Gaps = 16/248 (6%) Query: 4 MIYGIHAVQALLERAPER-FQEVFILKGREDKRLLPLIHALESQG-VVIQLANRQYLDE- 60 I+G+HAV+A L+ +++ R+ L +G + ++L Sbjct: 75 WIWGLHAVEAALKNQSRLGPIRLYVTPDRQ----KALEQVAPKRGDLHVRLTEMAEFSGF 130 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 GAVHQG+ P N L + ++P L++LD VTDP N+GA LR+ A G Sbjct: 131 LPQGAVHQGVALNGPPLEGDDLNGLMEGALRQERPVLVMLDQVTDPQNIGAILRTCAAFG 190 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 +I+ S + K A GA + VP RVTNL+R + L E +G AGEA+H Sbjct: 191 AAGLIMQDRHSPVMQGVLAKTAAGAMDRVPFARVTNLSRALESLTENGFVSLGMAGEAEH 250 Query: 181 TL---------YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVAT 231 +L Q+ L +VMG+EGEG+RRL EHCD L+ IPM G SLNVS AT Sbjct: 251 SLQAVLEQQGWRQAGSPRALVIVMGSEGEGLRRLVAEHCDHLVKIPMPGGFESLNVSHAT 310 Query: 232 GICLFEAV 239 I L+EA+ Sbjct: 311 SIALYEAL 318 >UniRef50_B9ILU6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9ILU6_POPTR Length = 571 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 66/281 (23%), Positives = 114/281 (40%), Gaps = 42/281 (14%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKG----------REDKRLLPLIHALESQGVVI 50 + E ++G+ V A L F ++I +G ++ K ++ + G+ Sbjct: 273 VGEGVFGVGPVLAALSTGRREFYALYIQEGLDLSGNNRKRKDKKGFEKVLRMAKKIGLST 332 Query: 51 QLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNL 109 + ++ L+ D HQG++ P + +L ++ ++ + LD VTDP NL Sbjct: 333 KEVSKHDLNMIVDNRPHQGLVLDASPLEMVKIQELDAVLPDEEKGSLWVALDEVTDPQNL 392 Query: 110 GACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI 169 GA +RSA G V++ SA L+ K + G+ E + L N+ + + E Sbjct: 393 GAIIRSAYFFGASGVVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLVSSAENGW 452 Query: 170 WIVGTA-GEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP-------MAGS 221 ++G + +L + LV+G+EG G+R L C +L+ IP G Sbjct: 453 RVLGGSVSSKAVSLSEVLPGQPTILVLGSEGTGLRPLVERSCTQLVRIPGNIPVDATVGG 512 Query: 222 -----------------------VSSLNVSVATGICLFEAV 239 V SLNVSVA G+ L + Sbjct: 513 GDEVKDEEINLECSSAEFRSFLAVESLNVSVAAGVLLHHLI 553 >UniRef50_C0X8M7 RNA methyltransferase n=36 Tax=Enterococcus RepID=C0X8M7_ENTFA Length = 258 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 13/236 (5%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 +I G H V+ ++ + +F +G+++ E + + + + L+ Sbjct: 29 QYIIEGFHLVEEAVKANADVQWILFNQRGQQEWGTW----LAEQETEKLIFVSDEVLNSL 84 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 S+ QGI+A V QE L + L+LD + DP N+G +R+ADAAG+ Sbjct: 85 SELPTSQGILAIVT-LETQQEQSLSF------KGGWLLLDNIQDPGNVGTMIRTADAAGL 137 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADH 180 VI+ K + N + G+ +P+++ L ++ +++ + + GT EA Sbjct: 138 AGVILGKGTADIYNTKVLRSMQGSHYHLPVLQ-RELTEVVQAFKKQGLPVFGTELNEAAI 196 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 Y+ + AL++G EG G+ + + IPM G SLNV++A G+ +F Sbjct: 197 AYYEQEAVENYALILGNEGSGVSPELLAETTKNLYIPMKGQAESLNVAIAAGVLMF 252 >UniRef50_B5JMU7 RNA methyltransferase, TrmH family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JMU7_9BACT Length = 273 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 73/237 (30%), Positives = 115/237 (48%), Gaps = 6/237 (2%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G A+ LE+ + F L+ ++ G + ++ ++ + Sbjct: 36 EGYRAISRALEKDVVPTEIYFCPDCFLGDNEDALLAQAQAAGATLFELSKHAFEKVAYRD 95 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 +G++A +K Q N D + D PFLLI++ + P NLG LRSADAAGV AVI Sbjct: 96 RPEGLLAVIK-----QWNHTLDDLQLSDPPFLLIVEAIEKPGNLGTILRSADAAGVDAVI 150 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 + N A + + G S+P + ++ ++ ++++ I + T D + Sbjct: 151 CCDSVTDLFNPNAVRSSTGVLFSMPTVTASS-DEVIKWIRQKGIRTIATTPHTDILYTDT 209 Query: 186 KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + G LA+VMG+E G+ CD + IPMAG SLNV++AT I LFEAVRQR Sbjct: 210 DLRGPLAIVMGSEQFGLSEKWLSACDTKVLIPMAGQADSLNVAMATLITLFEAVRQR 266 >UniRef50_C8NEH0 TrmH family RNA methyltransferase n=2 Tax=Granulicatella RepID=C8NEH0_9LACT Length = 256 Score = 230 bits (587), Expect = 4e-59, Method: Composition-based stats. Identities = 55/235 (23%), Positives = 107/235 (45%), Gaps = 16/235 (6%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ G H V+ ++ + + + + RL + L V + + ++ + S Sbjct: 30 YLLEGEHLVEEAIKERAQ-IKLIVVTSN----RLEDYKNLLAQTDVQVLVVSQDVFHKLS 84 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 QGI+A V+ +Q + ++LD V DP NLG +R+ADAAG Sbjct: 85 MTETAQGILAVVEIVKQEILP---------HKGRFIVLDAVQDPGNLGTIVRTADAAGFD 135 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE-ADHT 181 AV++ N + G+ +P+ + NL + +L+E+ + + TA Sbjct: 136 AVVLGTGTVDLYNDKVLRSMQGSHFHIPVFQA-NLQEYLPILKEKGVQVAVTALHRDSKD 194 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + +A+V+G EG+G+ + D +++IP+ G SLNVS+A+ + ++ Sbjct: 195 YSVLQGATDVAIVVGNEGQGVSDDVIDLADVVVTIPIFGKAESLNVSIASALLMY 249 >UniRef50_P94538 Uncharacterized tRNA/rRNA methyltransferase ysgA n=110 Tax=Bacillales RepID=YSGA_BACSU Length = 248 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 99/238 (41%), Gaps = 19/238 (7%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + +I G H V+ L+ +E+ + L G+ + + Sbjct: 29 TFLIEGEHLVEEALKSPG-IVKEILVKDETRIPSDLE-------TGIQCYMLSEDAFSAV 80 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 ++ Q I A + +L++D V DP NLG +R+ADAAG+ Sbjct: 81 TETETPQQIAAVCHMPEE----------KLATARKVLLIDAVQDPGNLGTMIRTADAAGL 130 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 AV++ + N + A G+ +P++R NL + L+ E + + GTA + Sbjct: 131 DAVVLGDGTADAFNGKTLRSAQGSHFHIPVVR-RNLPSYVDELKAEGVKVYGTALQNGAP 189 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + + AL++G EG G+ E D + +P+ G SLNV+VA I ++ Sbjct: 190 YQEIPQSESFALIVGNEGAGVDAALLEKTDLNLYVPLYGQAESLNVAVAAAILVYHLR 247 >UniRef50_D0LZ96 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZ96_HALO1 Length = 267 Score = 229 bits (586), Expect = 5e-59, Method: Composition-based stats. Identities = 92/251 (36%), Positives = 129/251 (51%), Gaps = 17/251 (6%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKR-----LLPLIHALESQGVVIQLANRQYL 58 ++YG+ V+ LL R +++ R ++ + + +GV ++ +R+ L Sbjct: 6 LVYGVGPVEELLGRRAREIAVLYVNPSRRSRQRAGDPVAAVAEQARRRGVSVEELSREQL 65 Query: 59 DEKS---------DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNL 109 D HQG++A V DL + LD VTDPHNL Sbjct: 66 DALVAGRGDAEDGGRVHHQGVVALVGAFEYAALEDLIA-APRQRPALFVALDSVTDPHNL 124 Query: 110 GACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENI 169 GA +RSA G VI+PKDR+AQ++ KV+ GA E + + +VTNLAR + L++ + Sbjct: 125 GAIVRSAHVLGADGVILPKDRAAQVSGVVTKVSAGATEQIAIAQVTNLARALEQLKQAEV 184 Query: 170 WIVG-TAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAG-SVSSLNV 227 WI G AGE +L TG L LV+GAEG G+R L CD LI IPM G V SLNV Sbjct: 185 WIAGLAAGEGATSLPAFDATGALCLVLGAEGTGLRPLVARTCDFLIEIPMLGAGVGSLNV 244 Query: 228 SVATGICLFEA 238 SVA G+ L+E Sbjct: 245 SVAAGVALYEV 255 >UniRef50_C6BUS0 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Desulfovibrionales RepID=C6BUS0_DESAD Length = 251 Score = 229 bits (584), Expect = 9e-59, Method: Composition-based stats. Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 2/241 (0%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + +I G VQ LL +PER +++ KGR+DK I + G+ ++A++ L Sbjct: 10 NTIIAGRKPVQELLLDSPERIDLLYLQKGRQDKNFERTIQRCKKYGIKYKIADKAELGRV 69 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 G HQG+IARV +D+ + +A P L++LD V DP N+G RS A G Sbjct: 70 FSG-NHQGVIARVAALPFADFDDMLENLADSPLPLLVVLDQVQDPGNVGVLARSLYALGG 128 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD-H 180 ++ K A L A K + GA +P+ RV N+++ + + I I G + D Sbjct: 129 AGIVTAKHGGAFLGPAAVKASAGALNKLPVARVNNISQALDKAIDMGINIYGAGLDDDSS 188 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + Y +++ LV+G E +G+R + C +LI IP SLNV+ A + + E R Sbjct: 189 SAYTAEIHTPAILVLGNEEKGIRFNVEKRCQKLIHIPFRRDFDSLNVAQAGAMLISEFAR 248 Query: 241 Q 241 + Sbjct: 249 R 249 >UniRef50_B2UR21 RNA methyltransferase, TrmH family, group 3 n=3 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UR21_AKKM8 Length = 193 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 98/162 (60%), Positives = 117/162 (72%) Query: 82 ENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKV 141 E L ++ P LLILD V DPHNLGA LR+AD AGV AVI P+D+S + T +V Sbjct: 32 EEVLDGILDKSSNPLLLILDCVQDPHNLGAILRTADGAGVDAVIAPRDKSVGITETVLRV 91 Query: 142 ACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEG 201 + GAAE VP I+VTNLARTM+ LQ IWI GT+ + D LY++ TG ALVMGAEGEG Sbjct: 92 SVGAAEKVPFIQVTNLARTMKQLQSRGIWIFGTSDKGDRGLYETDFTGPAALVMGAEGEG 151 Query: 202 MRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 MRRLT E+CD L+ IPM GS+ LNVSVATG+CL+E VRQRS Sbjct: 152 MRRLTEENCDFLLRIPMKGSIPCLNVSVATGVCLYEMVRQRS 193 >UniRef50_Q1MSB5 RRNA methylases n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MSB5_LAWIP Length = 290 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 2/233 (0%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ GI V L+E+ P++ +F+ KG K ++ + + L+ Sbjct: 47 ILSGIKPVLDLIEKEPQKIDTIFLQKGLCSKEYQKVLDLCRQTNIRFIFTTSKVLNRFCL 106 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 HQGI+AR+ + DL D + P +++ D + DP N G +R+ + G Sbjct: 107 T-NHQGIVARLFESGFIELEDLFDKVPDAPLPLIVVFDQIQDPGNAGTIIRTLYSLGGAG 165 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEAD-HTL 182 VI+PK L A++ A G E +P+ + NL+R + E+ I GT+ E D + Sbjct: 166 VIIPKHNGVFLGQDARRAAVGCLERLPISKAINLSRAIETANEKGFHIYGTSIEKDSKNV 225 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 +++++ L++G+E G+R ++ C ++ IPM V+SLNV+ A GI + Sbjct: 226 FEAELKFPALLILGSEKSGIRLQLKKRCHTILHIPMVRDVNSLNVAQAGGIII 278 >UniRef50_B5YER6 23S rRNA methyltransferase n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YER6_DICT6 Length = 266 Score = 228 bits (582), Expect = 1e-58, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 11/240 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G +Q E +++ I K +K+ ++ S + + +++ S Sbjct: 31 LVEGWRLIQDAKENGI-SIEKLIISKSLWNKKREEILEKFSSCDL--YIVEDNLMNKISL 87 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 GI+ + +++ + D +L D + DP NLG +R AD GV A Sbjct: 88 METPPGIMGVFPLFLSPKW----EILKNKDNKIVLYSDDIQDPGNLGTIIRVADGVGVDA 143 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 I+ ++ N + + G+ VP+ +++ + ++ IV + + Sbjct: 144 FILSENTVDPYNYKVIRASTGSIFRVPIW-ISDDKTFVEFFKD--WKIVIADPKGSKLYF 200 Query: 184 QSKMTGRLALVMGAEGEGMRRL-TREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + L++G E G+++ + L+ IP+ V SLNVSVA + LFEA RQR Sbjct: 201 EENFKESFVLILGNEAWGIKKEKYLDLNPILLRIPLRKGVDSLNVSVAASVFLFEAQRQR 260 >UniRef50_Q5WEJ4 23S rRNA methyltransferase n=2 Tax=Bacilli RepID=Q5WEJ4_BACSK Length = 246 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 21/233 (9%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G H V+ + + + V I + + E S+ Sbjct: 31 LIEGEHLVEEAWKSDW-KVETVLTTADDASLFPGECIG-----------VSEAVMKELSE 78 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI+A + + + L + ++LD V DP N+G +R+A AA Sbjct: 79 TKSPQGIVAVCQKKQWHTPERL--------KGRFVLLDRVQDPGNVGTIIRTALAADAAG 130 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ + NA + GA +P+ + +L + L+E I + GT+ + Sbjct: 131 VVLGSGCADLFNAKVIRATQGALFHLPVY-MGDLVTWIEALKESGIPVYGTSLQDATPHD 189 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 Q + AL++G EGEG++ + E + I SLNVSVA GI LF Sbjct: 190 QFHSQEQFALLLGNEGEGVQSHLLDAATENLFIRQNRKAESLNVSVAAGILLF 242 >UniRef50_A7HWP6 RNA methyltransferase, TrmH family, group 3 n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HWP6_PARL1 Length = 288 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 90/239 (37%), Positives = 124/239 (51%), Gaps = 6/239 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +YG HAV A L + + + + E + V +++ + + Sbjct: 53 YLYGFHAVLAALANPARLAERLVLTRNAETELARQGARLPADLPVRLEIMENEDIAALLP 112 Query: 64 -GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 GAVHQGI R P DL + A +++LD VTDPHN GA LRSA G Sbjct: 113 AGAVHQGIALRASPLP-----DLDVVEACEGTNRVVVLDQVTDPHNFGAILRSAAVFGAG 167 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+I + S L K A GA E V + R+TNL R + L+E +VG GE + +L Sbjct: 168 ALITTERNSPSLGGVLAKAASGALELVRVARITNLVRAIEELKELGFEVVGLDGEGEASL 227 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 K++ R+ALV+GAEG G+RRLTREHCD L +P AG + SLNVS A + L+E R+ Sbjct: 228 PDLKLSPRVALVLGAEGAGLRRLTREHCDLLARLPAAGGMKSLNVSNAAAVALYELFRR 286 >UniRef50_A8F2F0 tRNA/rRNA methyltransferase n=16 Tax=cellular organisms RepID=A8F2F0_RICM5 Length = 256 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 73/234 (31%), Positives = 113/234 (48%), Gaps = 9/234 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +YG H V + L + + + D + ++ N L + Sbjct: 27 YYMYGKHPVFSALNNPKRQIDNILCTREIFDTNKKLIGTR------SYEIVNNDILSKLL 80 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 + HQGI A+++P Y D+ + ILD +TD N+GA +RSA A ++ Sbjct: 81 ENHTHQGIAAKIRPIFSYNLEDIDITNPKCK---IAILDQITDTQNIGAIIRSAAAFDIN 137 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+I+P+D S + K ACG E +P+I+VTNL M L++ WI+G G A+ Sbjct: 138 AIILPQDNSPNESGGIAKAACGTLELIPIIKVTNLRSCMNYLKKHGFWIIGLTGSANDYF 197 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 ++ ++ LV G+E +G+RRL E CD L IP++ V SLNVS A I Sbjct: 198 TDKLISDKIVLVFGSEDKGIRRLVAETCDYLAKIPISQRVESLNVSNAASIIFH 251 >UniRef50_Q04SA9 TRNA (Guanosine-2'-O-)-methyltransferase n=4 Tax=Leptospira RepID=Q04SA9_LEPBJ Length = 253 Score = 227 bits (580), Expect = 3e-58, Method: Composition-based stats. Identities = 78/241 (32%), Positives = 126/241 (52%), Gaps = 9/241 (3%) Query: 2 SEMIYGIHAVQALLERA-----PERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQ 56 SE I+G + L E F ++++ + + +++ L S V + + Sbjct: 8 SEYIFGKRTLIELTEAHIGKEHSFPFTDLYVKENPGTDIVEKILNRLPSF-VKVHRISGS 66 Query: 57 YLDEKSDGAVHQGIIARVKPGRQ--YQENDLPDLIASLDQPFLLILDGVTDPHNLGACLR 114 LD G HQG++A P RQ + +L + ++ L+LD + DP NLG LR Sbjct: 67 KLDSLVPGRNHQGVVALKSPFRQQISDKKNLEEYLSEK-PGTFLVLDRIQDPGNLGNILR 125 Query: 115 SADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT 174 +A+ GV +I+P+ SA + +KV+ GA + + V NLA T+ +L+E WIV T Sbjct: 126 TAECFGVTNIILPERESAGITPVVEKVSSGALSFLKIFTVKNLANTLELLKENGYWIVST 185 Query: 175 AGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGIC 234 + + LA++MG EGEG++R+ E D ++ IP+ G++SSLNV+VATGI Sbjct: 186 SDRGTENWSKLPELKELAILMGNEGEGVKRILLEKSDFVLRIPIHGNLSSLNVTVATGIV 245 Query: 235 L 235 L Sbjct: 246 L 246 >UniRef50_D0B4K6 tRNA/rRNA methyltransferase n=41 Tax=Rhizobiales RepID=D0B4K6_BRUME Length = 297 Score = 227 bits (579), Expect = 4e-58, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 7/236 (2%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G+ V LE+ VF G+ +K + + ++G ++ + + + Sbjct: 59 EGLKLVIDALEQDWRIKTLVFAKSGKGNKTVEQVAARTFAKGGLVLEVTEKVISAITRRD 118 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 Q + + + + LD V DP NLGA +R+ADA G VI Sbjct: 119 NPQMVAGVFEQQYHQ-----LAGLKPKGNDVYVALDRVRDPGNLGAVIRTADAVGAKGVI 173 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 + D + + + G+ SVPL R + A + + + +VGT + Sbjct: 174 LIGDTTDPYSLETVRATMGSVFSVPLYRASE-ADFLNWRKGFSGLVVGTHLKGAVDYRTI 232 Query: 186 KM-TGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + L+MG E +G+ CD+L IP AG SLN+++ATG+ L+E R Sbjct: 233 PYANKPVILIMGNEQQGLPDSLAGACDKLARIPQAGRADSLNLAIATGVMLYEIRR 288 >UniRef50_D1A1M0 tRNA/rRNA methyltransferase (SpoU) n=26 Tax=Actinomycetales RepID=D1A1M0_THECD Length = 289 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 58/243 (23%), Positives = 97/243 (39%), Gaps = 12/243 (4%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G AV+ L + R L+ A E GV + + + + E + Sbjct: 35 EGPQAVREAL--GLPGVLTELFTTAEAESRHAELVTAAERAGVPVLRVSGEVMAELAQTV 92 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QG++ + L S + +L V DP N G LR+ADAAG AV+ Sbjct: 93 TPQGLLGVCTFVDVSLADAL-----SPPPTLVTVLAHVRDPGNAGTVLRTADAAGCDAVV 147 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 N + + G+ VP++ T + L+E + ++ G +HTL + Sbjct: 148 FTDASVDPYNGKCVRASAGSLFHVPVVAGTRFETLIGALRECGLTVLAADGAGEHTLDAA 207 Query: 186 ----KMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR- 240 + A V G E G+ D ++ +P+ G SLN++ A +CL+ + R Sbjct: 208 LDGGLLDRPTAWVFGNEAWGLPEEILRAVDHVVRVPIYGRAESLNLATAAAVCLYASARA 267 Query: 241 QRS 243 QR+ Sbjct: 268 QRA 270 >UniRef50_D1BMG9 tRNA/rRNA methyltransferase (SpoU) n=3 Tax=Veillonella RepID=D1BMG9_VEIPT Length = 264 Score = 226 bits (578), Expect = 5e-58, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 103/241 (42%), Gaps = 9/241 (3%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGR-EDKRLLPLIHALESQGVVIQLANRQYLDE 60 ++ GI +++ + + + I + + +DK +L L+ Q V +A D+ Sbjct: 29 EYIVEGIRSIRDIAAMG--AVKTIVIRESKAQDKNILDLLDLDTVQSVPKYIAQDPVFDK 86 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + QG++A V + + + LDGV DP NLG +R+A AAG Sbjct: 87 VDNTVNGQGVVAIVSKPTY-DIESISIV-----DGLYITLDGVQDPGNLGTIIRTAVAAG 140 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 V + + K N + A +PL L M+ E N+ TA E + Sbjct: 141 VKGIFLMKGTVDPFNDKTVRSTMSALHKIPLYEDITLTLLHDMVTESNMTSYVTALEHSN 200 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + + R LV+G EG G+ C I IPM G + SLNVSVA +C+++ Sbjct: 201 PYHTVRYAKRTMLVLGNEGNGVTPEVMNLCTNRIMIPMYGDMESLNVSVAAALCMYKVQE 260 Query: 241 Q 241 Q Sbjct: 261 Q 261 >UniRef50_B2GD96 rRNA methylase n=26 Tax=Bacilli RepID=B2GD96_LACF3 Length = 259 Score = 226 bits (577), Expect = 5e-58, Method: Composition-based stats. Identities = 56/238 (23%), Positives = 89/238 (37%), Gaps = 15/238 (6%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ G H V L+ E+ K ++ + + + + Sbjct: 31 YLLEGWHLVNEALQAD-RGLHELIGTKEEL-AAHPDIVARFKE----VYSVTPAIMAAVT 84 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 + QGI+ DL + L L LD V DP N+G +R+ADAAG Sbjct: 85 ETVTPQGIMVVA------DLPDLHQVATDLSGA-WLFLDRVQDPGNVGTMVRTADAAGFA 137 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE-ADHT 181 V+ + + + G+ + L +L + +++ + GT A Sbjct: 138 GVVAGDGSADLFSPKVVRSMQGSQFHLALYE-GDLKKWFEDVKQAGYPVYGTQLNPAAKD 196 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 G ALVMG EG GM + + IPM G SLNV+V+ GI +FE Sbjct: 197 FRIVTPQGGFALVMGNEGRGMSEELLKQTTANLYIPMRGQAESLNVAVSAGILMFELA 254 >UniRef50_Q5FFT7 Hypothetical tRNA/rRNA methyltransferase n=4 Tax=Ehrlichia ruminantium RepID=Q5FFT7_EHRRG Length = 249 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 64/241 (26%), Positives = 118/241 (48%), Gaps = 4/241 (1%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKG--REDKRLLPLIHALESQGVVIQLANRQYLDE- 60 IYG H A L+ + E+ + + + + + + + + + + N ++ Sbjct: 7 WIYGKHPCVAALQNINRKCHELLVTENFIKHNNGIQKIRELSKQKNIYPKQVNINTINSV 66 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAG 120 + HQGI +V D+ I + + +++LD VTD +N+G+ +RSA Sbjct: 67 LPPNSNHQGIALQVSIVDTVSIEDVLSNIPT-EISTIILLDQVTDVYNVGSIIRSAVCFN 125 Query: 121 VHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADH 180 VHAVI+P S N K + GA + +P++ V N++ + L++ W G + Sbjct: 126 VHAVILPYYNSPSENCGMSKTSSGAIDMIPIVYVVNISNAIHTLKKAGYWCYGFDAKQGE 185 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 L++ K+ + ++ G+E +G+R LT+E+CD L+ I + + SLNVS A I L+ Sbjct: 186 PLHKIKLDNKRLVIFGSENKGLRTLTKENCDFLLKIATSERIDSLNVSNAAAIALYSIFI 245 Query: 241 Q 241 Q Sbjct: 246 Q 246 >UniRef50_Q04FE0 rRNA methylase n=2 Tax=Oenococcus oeni RepID=Q04FE0_OENOB Length = 255 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 13/236 (5%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + M+ G H VQ L +A Q V + + D+ L+ + QGV + + Sbjct: 29 TYMLDGWHLVQEALNQAA-PIQAVIATEEQMDQHLIDV-----PQGVPAFQVSEEVARHI 82 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 + QGI A+ + L+LD + DP N+G +R+ADAAG Sbjct: 83 AKTNTPQGIFAQTSLPNNSFDPKYV------HNGSWLLLDRIQDPGNVGTLIRTADAAGF 136 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADH 180 V + K+ + N + G+ + L++ +L + L+ + + G+ E Sbjct: 137 SGVALSKESADPFNPKVVRAMQGSQFHLKLVKEVDLNDWVDKLEANDYNVYGSTLSENSV 196 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 AL++G EG+G+ + E + I G SLNV+VA GI +F Sbjct: 197 DYKTVVPEKNFALILGNEGQGIDPEIQAKTSENLHINFLGKAESLNVAVAGGILMF 252 >UniRef50_C9A4E5 RNA methyltransferase n=3 Tax=Enterococcus casseliflavus RepID=C9A4E5_ENTCA Length = 259 Score = 225 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 61/236 (25%), Positives = 98/236 (41%), Gaps = 16/236 (6%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 S +I G H VQ L + + + + L E L + Sbjct: 35 SYLIDGWHLVQEALHA-QVPIKALLVTPRGLSEANGQLDDYQEES----YLITEEIAAML 89 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 SD QGI A V+ QE DL L + LILD V DP N+G +R+ADAAG Sbjct: 90 SDLPTPQGIFAVVEK----QEQDLQTLTGN-----WLILDNVQDPGNVGTMIRTADAAGF 140 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEA-DH 180 V + + + + + G+ +P++ + ++ LQ + I GT Sbjct: 141 SGVFLGEGTADLYSTKVLRSMQGSNYHLPIVEGA-IPPFLKQLQAAGVAIYGTELNKEAV 199 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + A ++G EG+G+ + D+ + IP+ G SLNV++A GI ++ Sbjct: 200 PYTELPKGQAAAFILGNEGQGVNQELLALTDKNLYIPIYGQAESLNVAIAAGILMY 255 >UniRef50_B8E0E0 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=B8E0E0_DICTD Length = 269 Score = 225 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 55/240 (22%), Positives = 102/240 (42%), Gaps = 11/240 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G +Q E +++ I K +KR ++ + S + + +++ S Sbjct: 31 IVEGWRLIQDAKENGIF-IEKLIISKSLWNKRRDEILKSFSSYDL--YIVEDNLMEKISL 87 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 GI+ + +L+ + +L D + DP NLG +R AD GV A Sbjct: 88 METPPGIMGVFPLFLFPKW----ELLEEKNNKIVLFSDDIQDPGNLGTIIRIADGVGVDA 143 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VI+ ++ N + + G+ VP+ V++ + + ++ + + Sbjct: 144 VILSENTVDPYNYKVIRGSTGSIFRVPIW-VSDKKTFIEFFK--GWKVIIADPKGSKVYF 200 Query: 184 QSKMTGRLALVMGAEGEGMRRL-TREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 Q + L++G E G R+ + L+ IP+ V SLNVS+A + LFEA RQR Sbjct: 201 QENLRESFVLILGNEAWGTRKEKYIDLDPILLKIPLREGVDSLNVSIAASVFLFEAQRQR 260 >UniRef50_B8H4C5 23S rRNA Gm2251 methyltransferase n=3 Tax=Caulobacteraceae RepID=B8H4C5_CAUCN Length = 278 Score = 225 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 85/242 (35%), Positives = 121/242 (50%), Gaps = 7/242 (2%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 + I+G HAV+A L + + KRL P + L V + ++ + Sbjct: 38 KDWIWGTHAVEAALANPRRPAPKRLLATPDRAKRLAPHLQKLTCLQV---MEGQEIAKQL 94 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 GAVHQG+ ++ +L + + FL++LD +TDP N+GA RSA A G Sbjct: 95 PQGAVHQGLALKIDEPEPLTIAEL----GTPAKGFLVMLDQITDPQNIGAIFRSAAAFGA 150 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 VI+ + L+ K A GA + P RV NL+R + L + V AGEA+ + Sbjct: 151 KGVILQDRHAPALSGVLAKTAVGAVDKAPYARVVNLSRALEELADLGWRAVALAGEAEQS 210 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 L + LV+G+EGEG+RRL EHCD L IPM G SLNVS A I L+EA + Sbjct: 211 LDAVLDSQPTVLVLGSEGEGVRRLVAEHCDALGKIPMPGGFESLNVSAAAAIALYEASKV 270 Query: 242 RS 243 R+ Sbjct: 271 RA 272 >UniRef50_C5XJ83 Putative uncharacterized protein Sb03g034180 n=2 Tax=Andropogoneae RepID=C5XJ83_SORBI Length = 552 Score = 225 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 111/277 (40%), Gaps = 42/277 (15%) Query: 5 IYGIHAVQALLERAPERFQEVFILKG----------REDKRLLPLIHALESQGVVIQLAN 54 +YG+ V A L F ++I + ++ K + ++ E G+ + + Sbjct: 260 VYGVGPVLAALMARRREFYALYIQESMDLSGNNKKRKDKKAVEKVLRMAEEIGLKVIETS 319 Query: 55 RQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDL-IASLDQPFLLILDGVTDPHNLGACL 113 + L+ D HQG++ P +L + + P + LD + DP NLGA + Sbjct: 320 KHDLNMVVDNRPHQGVVLDASPLEMVNIKELDPVRVEGGKAPVWIALDEIMDPQNLGAII 379 Query: 114 RSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV- 172 RSA G VI+ SA L+ K + G+ E + L+ N+ + + E ++ Sbjct: 380 RSAYYFGAQGVILCAKNSAPLSGVVSKASAGSLELIELLSCRNMMQFLSSSAENGWRVLG 439 Query: 173 GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM-------------- 218 GT L + ++ LVMG+EG G+R L C L+ IP Sbjct: 440 GTIANKAVPLSEVEIGVPTILVMGSEGTGLRPLVERSCTHLVRIPGNVDVFVEGAGADAD 499 Query: 219 AGS----------------VSSLNVSVATGICLFEAV 239 AG V SLNVSVA G+ L+ Sbjct: 500 AGEEGDSSSSNQDLRSFLAVESLNVSVAAGVLLYHLA 536 >UniRef50_Q6IN84 rRNA methyltransferase 1, mitochondrial n=14 Tax=Euteleostomi RepID=MRM1_HUMAN Length = 353 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 18/258 (6%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGRED--KRLLPLIHALESQGVVIQLANRQYLDE 60 E+++G+ L+ A + + G+ + L+ E++ + + RQ LD Sbjct: 50 ELLFGMTPCLLALQAARRSVARLLLQAGKAGLQGKRAELLRMAEARDIPVLRPRRQKLDT 109 Query: 61 KSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQP-FLLILDGVTDPHNLGACLRSADAA 119 VHQG+ V P R + + D L+LDG+ DP N GA LRSA Sbjct: 110 MCRYQVHQGVCMEVSPLRPRPWREAGEASPGDDPQQLWLVLDGIQDPRNFGAVLRSAHFL 169 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT----- 174 GV VI + S L K + GA E + + +L ++ ++ + GT Sbjct: 170 GVDKVITSRRNSCPLTPVVSKSSAGAMEVMDVFSTDDLTGFLQTKAQQGWLVAGTVGCPS 229 Query: 175 --AGEADH----TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISI-P---MAGSVSS 224 ++ + + LV+G EG G+ + + C L++I P + + S Sbjct: 230 TEDPQSSEIPIMSCLEFLWERPTLLVLGNEGSGLSQEVQASCQLLLTILPRRQLPPGLES 289 Query: 225 LNVSVATGICLFEAVRQR 242 LNVSVA GI L QR Sbjct: 290 LNVSVAAGILLHSICSQR 307 >UniRef50_A4S7U0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S7U0_OSTLU Length = 318 Score = 225 bits (575), Expect = 9e-58, Method: Composition-based stats. Identities = 78/259 (30%), Positives = 116/259 (44%), Gaps = 16/259 (6%) Query: 1 MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLL--------PLIHALESQGVVIQL 52 + E++YG + V L R +++ G ++ E++ V ++ Sbjct: 60 VGEIVYGTNPVLEALRRNRRALFALYVQTGEGGAANGGKGAGAESEILRLAEARAVTVKR 119 Query: 53 ANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGAC 112 A++ L+ D HQG++ + DLP + P L LD + DP NLGA Sbjct: 120 ASKHDLNMACDNKPHQGVLLDAEALEIPTLEDLPKWDGRGEPPVWLALDEIVDPQNLGAA 179 Query: 113 LRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV 172 LRSA GV V+ SA NAT K + GA E+ + + + R + ++E +V Sbjct: 180 LRSAHFLGVDGVVCCAKNSAPFNATVSKASAGAMEAQVVHQTGVMHRFLAKARDEGWDVV 239 Query: 173 GTAGEA-DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM----AGSVSSLNV 227 G A +A + + LVMG EG G+R R C+ LI IP A V SLNV Sbjct: 240 GAAADARAEDVSDFSVRAPTILVMGNEGSGLRTNVRRACNRLIEIPRSASSAAGVDSLNV 299 Query: 228 SVATGICLF---EAVRQRS 243 SVA GI + A R R+ Sbjct: 300 SVAAGILIHRLVAARRSRA 318 >UniRef50_B2S257 Possible rRNA methylase n=3 Tax=Treponema RepID=B2S257_TREPS Length = 292 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 87/279 (31%), Positives = 128/279 (45%), Gaps = 40/279 (14%) Query: 4 MIYGIHAVQALLERAPER-----------------FQEVFILKGREDKRLLPLIHALESQ 46 +I G+ A++ L P + + + E+ R+ L+ ++ Sbjct: 2 VISGLRAIEEFLRAQPAALEGLHAGGKNSKTQQSCVRVLTLYYAAENARIKRLLGMAAAR 61 Query: 47 GVVIQLANRQYLDEKSDGAV-----HQGIIARVKPGRQYQ----------------ENDL 85 G+ I LD+ + H+GI+A + E L Sbjct: 62 GIRITHTTCAVLDKLARSLPPALRDHRGILAVLSSPSATPQGSHTRKKRPAVDSSQERTL 121 Query: 86 PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGA 145 +A+ +L+LD +TDPHN+GA +RSAD V AV++P A T +V+ GA Sbjct: 122 LHALATHTHALVLVLDAITDPHNVGAIVRSADQFSVDAVLLPHHHGAGGTETITRVSAGA 181 Query: 146 AESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRL 205 VPL+RV NL RT +L+ W+ G + + + ALV+G EG G+ L Sbjct: 182 VAWVPLVRVRNLVRTAGILKRSGFWLYGADVAGEA-IGARTFPPKTALVLGNEGHGVSPL 240 Query: 206 TREHCDELISIPMAGSVSSLNVSVATGICLFEAVR-QRS 243 R HCD LISIP G+V SLNVSVA GI L+E R Q+S Sbjct: 241 LRTHCDALISIPTQGNVDSLNVSVAAGILLYEIRRSQQS 279 >UniRef50_Q038C4 rRNA methylase n=8 Tax=Lactobacillus RepID=Q038C4_LACC3 Length = 253 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 58/238 (24%), Positives = 103/238 (43%), Gaps = 17/238 (7%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ G H VQ L +++ + + R AL+ I + + S Sbjct: 30 YLLEGRHLVQEALASGQTP-YDIYATEKYVEDR------ALKPFYEKITQISESVSEHLS 82 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 D QGI A + + LP+ ++ L+LD + DP N+G +R+ADAAG+ Sbjct: 83 DTQTPQGIFAVM----PRRAEQLPEPLSGQ----FLLLDAIQDPGNVGTLVRTADAAGIQ 134 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADHT 181 V+ + + G+ V ++ L ++ L I + G+ E + Sbjct: 135 TVVFGNGTADAFGPKVLRAMQGSQFHVRIVSAK-LMPIIKALHRGGIPVYGSELNEKAKS 193 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 + + + R AL++G EG GM + ++ D + IP+ G SLNV+VA + +F V Sbjct: 194 YHSIQPSERFALIVGNEGNGMDPVLLQNTDTNLYIPIRGKAESLNVAVAAAVMMFHLV 251 >UniRef50_A9WFI1 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chloroflexi (class) RepID=A9WFI1_CHLAA Length = 261 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 61/238 (25%), Positives = 96/238 (40%), Gaps = 7/238 (2%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +I GI V ++ V + LI + G I + + Sbjct: 29 YLIEGIRPVAEAIQCGAPLDMLVVAPELLNSSFAHELIDTYAAGGGKILTVSAAVFSSLA 88 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 D QG+ A V +L ++L V DP NLG LR+AD AG Sbjct: 89 DKDNPQGLAA-VGRIHYTPLPNLSPAPVG-----WVVLVEVADPGNLGTILRTADGAGFS 142 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 VI+ + + A + + GA S + R T+ + ++ I +VG++ Sbjct: 143 GVILVGATTDPFDPAAVRASMGALFSQQIAR-TSWPDLLTWARQHRIALVGSSDRGASDY 201 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + L LV+G+E G+ CD ++ IPM G SLN++VA GI ++EA R Sbjct: 202 RATTYPRPLLLVLGSERHGLTDEQLAACDLVVRIPMRGRSDSLNLAVAAGILMYEATR 259 >UniRef50_A6Q869 RNA methyltransferase, TrmA family n=7 Tax=Proteobacteria RepID=A6Q869_SULNB Length = 263 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 62/234 (26%), Positives = 109/234 (46%), Gaps = 5/234 (2%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGRED-KRLLPLIHALESQGVVIQLANRQYLDEKSD 63 IYG +AV LE ++ + K +D L + +G+ +Q ++ L S Sbjct: 32 IYGRNAVLEALEDPDITIHKLHLSKSNKDAPVLEQMKKIASKRGIEVQYHDKASLSRISK 91 Query: 64 GAVH-QGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 A QG+ + E D I+ ++ LDGVT+P NLG +RS A + Sbjct: 92 NAKQDQGVALDIVLEHFGDEKDF---ISKNINYRIIALDGVTNPQNLGMIIRSCAAGNID 148 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A+++P +AQ++ K + G + +I+ +NL T++ ++E + + AD + Sbjct: 149 AILLPTKGAAQISPLVIKASVGTLFKMSIIKTSNLKETLKHFRKEGASLYTLSSHADKSY 208 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + + + V+G E EG+ + C+ I+IPM V SLNV+V + F Sbjct: 209 KEQIYSEKTIFVLGNESEGVSPAVEKLCNASIAIPMQRGVESLNVAVTASLLAF 262 >UniRef50_UPI000196B15F hypothetical protein CATMIT_01248 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B15F Length = 242 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 26/233 (11%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G H V+ + V + + + + + +++ S Sbjct: 29 LVDGFHMVEEAKKAG--LCDLVISTDESLEGQD------------KVLVVSDSVMEKLSY 74 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 Q I+A +LILDGV DP NLG LRSA A G Sbjct: 75 TKTPQPIMAVCHKKDNI----------LKHYDRVLILDGVQDPGNLGTILRSALAFGFKQ 124 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +++ D N A + GA + ++R +L + LQ+ + ++ T+ ++ Sbjct: 125 IVMSPDCVDLYNDKALRSTQGAVFHLDIVR-DDLHHVIPELQKLGVRVIATSLHNASSID 183 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 K T ++A VMG EG G+R T D + IP+ ++ SLNV VA GI ++ Sbjct: 184 DIKSTDKMAFVMGNEGNGVRDETIAMSDASLYIPI-DTMESLNVGVAAGIVMY 235 >UniRef50_A6P2D0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P2D0_9BACE Length = 252 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 57/236 (24%), Positives = 92/236 (38%), Gaps = 18/236 (7%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G ++ L+ + + +G PL L + + L S Sbjct: 34 EGPKLIEEALKWGA-CVETILAAEG------KPLPQGLTGESRQV-EVPDSLLRAVSSVE 85 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QG++A + + L L+LDGV DP NLG R+ADA G ++ Sbjct: 86 TPQGLLAVCRNPGLTPPDKL-------TGGRYLVLDGVQDPGNLGTIWRTADAFGADGLL 138 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADHTLYQ 184 + + + + GA +P T+L +L +I + TA E + Sbjct: 139 LVNGCADPWSPKTIRATMGACFRLP-AWETDLETVRALLDGADIPLYATALREDTVDVRD 197 Query: 185 SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + R A+V+G+EG G+ C I IPM SLN ++A G+ L+E R Sbjct: 198 VDL-KRAAVVIGSEGRGISDEALALCRRTIKIPMRARCESLNAAMAAGVVLWEMCR 252 >UniRef50_A8DJH5 TsnR n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJH5_9BACT Length = 282 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 68/242 (28%), Positives = 105/242 (43%), Gaps = 8/242 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 I G+ V+ L + + E R L+ AL+SQ + SD Sbjct: 30 FIEGVRLVEEALRSKIVFEAVAYTPRLYETPRGAQLLAALQSQPCRGARLTEALMAYISD 89 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G+I + DL P ++ DG+ P NLGA +R+A+AAG Sbjct: 90 VETAPGVI-VLGQRPSSTLPDL----THHPAPLFVLADGIQSPGNLGALIRTAEAAGATG 144 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 ++V A + A G+A +P+I +++A ++ L + + +V D Sbjct: 145 ILVTVGTVDPFQPKALRAAAGSAFRLPIIAGSSVADELQKLYRQGVRLVTADIHGDTPYE 204 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDEL---ISIPMAGSVSSLNVSVATGICLFEAVR 240 + L +G+EG G+R LT + L + IPM G V SLNV+VA I L+EA R Sbjct: 205 AFDWRQPVLLWLGSEGHGLRSLTDDFKHRLAARLVIPMEGQVESLNVAVAGAILLYEARR 264 Query: 241 QR 242 QR Sbjct: 265 QR 266 >UniRef50_B2A5N7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5N7_NATTJ Length = 269 Score = 222 bits (567), Expect = 8e-57, Method: Composition-based stats. Identities = 52/244 (21%), Positives = 100/244 (40%), Gaps = 12/244 (4%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDG 64 + G ++ L + ++ L+ + +Q + + + + Sbjct: 30 LEGSLLIKEALHSGVKFDFVLYSADQEVINANEDLLLEIHNQQIPAYSVDPSLFQKTAFT 89 Query: 65 AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAV 124 QGI+A + E DL L + +LIL V DP N+G +RSADA G V Sbjct: 90 ETPQGILAVC----TFNEGDLESLTSEKKD--ILILYQVQDPGNMGTLIRSADAFGFQGV 143 Query: 125 IVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQ 184 + K N + + G+ +P++ + + + ++LQ E +I+ + Sbjct: 144 VCSKGCVDPTNDKVVRSSMGSLFHIPVVMNSEIDQLFQVLQREQYFILFGDKSGSKPIMT 203 Query: 185 SKMTG-RLALVMGAEGEGMRRLTREHC-----DELISIPMAGSVSSLNVSVATGICLFEA 238 ++ +AL +G E G++ L + + + IPM G SLN +A I ++E Sbjct: 204 IDLSNTAVALFVGNESRGLQDLNFDQKFNQVRHQKVEIPMFGKAESLNAGIAGSIMMYEL 263 Query: 239 VRQR 242 ++R Sbjct: 264 SKKR 267 >UniRef50_Q11C30 tRNA/rRNA methyltransferase (SpoU) n=21 Tax=Alphaproteobacteria RepID=Q11C30_MESSB Length = 286 Score = 222 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 56/236 (23%), Positives = 96/236 (40%), Gaps = 7/236 (2%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G+ V L+ ++ GR + + + G ++ + + L + Sbjct: 46 EGLKLVLDALDSGWAIRTLIYAKAGRGNAAVEKAAARTVAAGGLVLEVSEKVLSAITRRD 105 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 Q ++ + + + + LD V DP NLG +R+ DA G VI Sbjct: 106 NPQMVVGVFEQRWLP-----LKEVTPKGEDLWVALDRVRDPGNLGTIIRTVDAVGARGVI 160 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 + + + + + G+ SVPL R A + + +VGT + Sbjct: 161 LVGECTDPFSVETVRATMGSVFSVPLARADE-AAFLAWREHFAGLMVGTHLKGSVDYRNV 219 Query: 186 KMT-GRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + G + L+MG E +G+ E CD L+ IP AG SLN++VATG+ L+E R Sbjct: 220 DYSGGPVLLLMGNEQQGLPDKLAEACDRLVRIPQAGRADSLNLAVATGVMLYEIRR 275 >UniRef50_C1ZH70 rRNA methylase, putative, group 3 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZH70_PLALI Length = 271 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 24/259 (9%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGR---EDKRLLPLI------------------HA 42 I+G H V A + E+ R D P++ + Sbjct: 12 WIWGRHLVSATIHAKYWIPLELHYDSHRFSPHDPLGDPIVGDFPLGDSIEEAHSTSLKNL 71 Query: 43 LESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDG 102 E+ G+ + + L HQG+ AR+ L L+ILDG Sbjct: 72 CEAVGIQLVASTADQLSRLIRAEDHQGLAARMPEFPYADFEGLFQAQL---PALLVILDG 128 Query: 103 VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMR 162 + D NLGA +R A+A G +++P+ + +N+ A + + GA +P+ RV L R + Sbjct: 129 IQDSFNLGAIIRCAEALGAGGIVLPEKGQSGVNSQAARSSAGAVNFLPIYRVPALDRAID 188 Query: 163 MLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSV 222 L+ + I+ +++ +L+ + L L++G EG+G+ CD + IPMAG Sbjct: 189 QLKSRGMKILAATEKSEQSLWNVVIPAPLCLIIGNEGKGVSSALLSACDIQVRIPMAGQT 248 Query: 223 SSLNVSVATGICLFEAVRQ 241 SSLN +VA GI L E RQ Sbjct: 249 SSLNAAVAAGILLAEIQRQ 267 >UniRef50_A7VXH5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VXH5_9CLOT Length = 270 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 51/236 (21%), Positives = 93/236 (39%), Gaps = 8/236 (3%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G+ + + + + E R + L + L ++Q S Sbjct: 35 EGVRLCRDAAYSGVRILRMFYTEEALE--RYPKDVELLREKAERAFLLSQQLAGGLSATV 92 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QGI + D D LL L+ + DP NLG LR+A+A G+ VI Sbjct: 93 TPQGIFCVCAMLDKTDCLDKMDA-----SGQLLGLEDIQDPSNLGTVLRTAEALGIGGVI 147 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE-ADHTLYQ 184 + + + + + GA +P+ V + + L+++ + + + Q Sbjct: 148 LTRGCCDIYSPKVLRGSMGAVFRLPMALVETMPPAVNALEQKGFVTMAAVPDREAEPITQ 207 Query: 185 SKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + +++G EG G++ T C ++IPM G SLN SVA + ++E +R Sbjct: 208 VLFSSPSIVLVGNEGNGLKPETIRACQRRVTIPMLGRAESLNASVAASLLMWEMMR 263 >UniRef50_Q8DNE3 Possible rRNA/tRNA methylase n=69 Tax=Streptococcaceae RepID=Q8DNE3_STRR6 Length = 252 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 106/237 (44%), Gaps = 20/237 (8%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +I G H + ++ +++F L+ D+ A Q V I + L + + Sbjct: 34 YLIEGWHLFEEAVQAG-VTIEKIFALENYRDQL------AAFPQTVWI---SEDILLDLA 83 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 D QGI+A V+ Q A L Q L L+ V DP N+G +R+ADAAG Sbjct: 84 DSQTPQGIVAVVQKEEVGQ--------ADLSQGKFLFLEDVQDPGNVGTIIRTADAAGFT 135 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADHT 181 VIV + + + G+ +P+ R+T+ A + ++ I ++ T + Sbjct: 136 GVIVSDKSADIYSLKTLRSMQGSHFHLPIYRMTSPA-LLDETKKVAIPVLATTLSKDSVD 194 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + LVMG EG+G+ L E D+L+ I M G SLNV+VA GI +F Sbjct: 195 YRELPSIENFVLVMGNEGQGISPLMAESADQLVHISMKGQAESLNVAVAAGILIFHL 251 >UniRef50_C9LL58 RNA methyltransferase, TrmH family n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL58_9FIRM Length = 269 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 6/234 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G+ + + + + + E+ + + E+ + + S Sbjct: 31 LMEGLRNAEDVQNQEISDIVCLVQSERAENGSVQHIFERGENLHWLFCEVEEPLMRLISG 90 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGII VK L + + ++LD V DP N+GA +R+A AAG Sbjct: 91 TENGQGIILLVKQPYVMDYPQLLNGLHGK----YVLLDTVQDPGNVGAIIRTAAAAGCSG 146 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQE-ENIWIVGTAGEADHTL 182 V++ K + + + + G+ +P+ ++ ++ ++ + +GT+ A Sbjct: 147 VLLTKGSADPYSEKVVRSSMGSILRLPIYHDLDI-EFLKEIKSFSKVPFIGTSLSASQNY 205 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 +K + G EG G+ + D + IPMAG+V SLNVS I LF Sbjct: 206 RHAKFVTEGVFIFGNEGSGISPEILDLTDWNVFIPMAGTVESLNVSSTAAIILF 259 >UniRef50_Q6UCQ6 Predicted tRNA/rRNA methyltransferase n=2 Tax=Bacteria RepID=Q6UCQ6_9PROT Length = 257 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 68/235 (28%), Positives = 120/235 (51%), Gaps = 4/235 (1%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 IYG HAV L EV+ E K + LE+ V+ R +D Sbjct: 17 YWIYGHHAVVGALMNENRVKYEVYFTSEAEKKLKNEI--KLENINVISIKKTRDEIDLLL 74 Query: 63 DG-AVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 G + HQGI RV+ + + +D + + + ++ + +LD + DP N+GA RSA A + Sbjct: 75 KGISNHQGICMRVEKLQTPKLSDFINNL-NEERSIIFLLDQLDDPQNVGAIFRSALAFNI 133 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHT 181 +I+ S N+ K A A + VP I++ N++ +++L++ WI G +A+ + Sbjct: 134 DGIILTNTNSVTENSFLAKTASSALDKVPFIKIQNISSCIKILKDSGYWIYGLDMKAERS 193 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + ++ ++ ++G+E +GMR++T CDE + I M+ ++ SLNVS I +F Sbjct: 194 ITETTFPKKIVFILGSESKGMRKITDSLCDEGLKIKMSDNLESLNVSNTAAIIMF 248 >UniRef50_Q5JKV8 Putative tRNA/rRNA methyltransferase n=2 Tax=Oryza sativa RepID=Q5JKV8_ORYSJ Length = 517 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 69/277 (24%), Positives = 110/277 (39%), Gaps = 42/277 (15%) Query: 5 IYGIHAVQALLERAPERFQEVFILKGRE----------DKRLLPLIHALESQGVVIQLAN 54 +YG+ V A L F ++I +G + K + ++ E G+ + A+ Sbjct: 225 VYGVGPVLAALMAERRDFYALYIQEGMDFSVSNKKKKDKKGIEKVLQLAERIGLKVIEAS 284 Query: 55 RQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDL-IASLDQPFLLILDGVTDPHNLGACL 113 + L+ D HQG++ P +L + + P + LD V DP NLGA + Sbjct: 285 KHDLNMVVDNRPHQGLVLDASPLEMVNTKELEPVRVDDGKAPVWIALDEVMDPQNLGAII 344 Query: 114 RSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIV- 172 RSA G V++ SA L+ K + G+ E + L+ N+ + + E ++ Sbjct: 345 RSAYFFGAEGVVLCAKNSAPLSGVVSKASAGSLELIELLSCRNMMQFLSSSAENGWRVLG 404 Query: 173 GTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP--------------- 217 GT L + LV+G+EG G+R L C L+ IP Sbjct: 405 GTVAPKAIPLSEVVPGEPTILVLGSEGTGLRPLVERSCTHLVRIPGNVDGSFVGADTDTD 464 Query: 218 -------------MAG--SVSSLNVSVATGICLFEAV 239 M +V SLNVSVA G+ L+ Sbjct: 465 GGEEGDNYSGNQDMKSFLAVESLNVSVAAGVLLYHLA 501 >UniRef50_C9RRQ7 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRQ7_FIBSS Length = 415 Score = 221 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 12/236 (5%) Query: 6 YGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGA 65 G+H V+ L++ E V++++G E+ LI A+ + + + S Sbjct: 183 EGVHVVEELVKHHRELVISVYVVEGFEN---EELIEAINEAEITLHTLTEDQMKRLSSTM 239 Query: 66 VHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVI 125 QGIIA + + + L ++D V DP NLG R++ +I Sbjct: 240 TTQGIIAYCNIASKKPVYE-------TSRSVLTLVDAVQDPGNLGTLFRTSLGFNSSGMI 292 Query: 126 VPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQS 185 + + + N + + G VP +L + L+ + I+ T A +L + Sbjct: 293 LGRGTVSPFNPKVVRGSSGTFLRVPFEFDVDLVDQINFLRSKGYTIIATDLHAKQSLREI 352 Query: 186 KMTG--RLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAV 239 ++A ++G EG G E DE + IPM+ + SLNV+VA GI +EA Sbjct: 353 PAHKLRKMAFLVGNEGAGTNPYFIELADETVKIPMSSELESLNVAVAHGILSYEAA 408 >UniRef50_A5US41 tRNA/rRNA methyltransferase (SpoU) n=4 Tax=Chloroflexaceae RepID=A5US41_ROSS1 Length = 262 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 62/241 (25%), Positives = 94/241 (39%), Gaps = 13/241 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGRE-DKRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ G+ V LE ++ + L+ L A Q + S Sbjct: 30 VLEGVRLVADALESGATLTLTLYAPDQLQLTPAGAALLQKLRYLPAS-YEATPQVVAAAS 88 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 D QG++A +A LL++D V DP NLG LRSA+A GV Sbjct: 89 DTVHPQGVVALASWPH----------VAPGKPGLLLVIDAVQDPGNLGTLLRSAEAVGVA 138 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 V+ + A GA + + + + L + + EA Sbjct: 139 QVLCSVGTVDLYAPKVVRSAMGAHFRLAMEQDLSWDAIGERLASVD-HVYAADPEARMPY 197 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 Y + AL++G E G+ R + I+IPM G SLNV+VA + LFEA+RQR Sbjct: 198 YAADWRQPSALLVGNEAHGLSDAARRLATKQIAIPMRGGTESLNVAVAASVILFEALRQR 257 Query: 243 S 243 + Sbjct: 258 T 258 >UniRef50_D2MNZ0 RNA methyltransferase, TrmH family n=1 Tax=Bulleidia extructa W1219 RepID=D2MNZ0_9FIRM Length = 237 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 60/240 (25%), Positives = 113/240 (47%), Gaps = 8/240 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G +V+A LE +++ ++D+ L ++ V + R+ ++ + Sbjct: 2 IIEGATSVKAALEAKKRVVNALYVDDKKKDRNLNYILFKAHEAHVPVYRLKREEINTLAF 61 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G H G++A V+ + D + FLL+L+GV DP N G +R+A +AGV Sbjct: 62 GKTHGGLLADVE-------ERIMDHLEISRSSFLLVLEGVVDPFNFGYMVRTAYSAGVDG 114 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 +++P+ L + K + GA + +I +LA+ +R+L+E+ I + Sbjct: 115 ILIPEYHWHDLESVILKSSAGAFDHCSIIPSKDLAQDLRLLKEKGFTIYAGYRDNAIVYD 174 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSV-SSLNVSVATGICLFEAVRQR 242 ++ T +G E G+ + E D+ + IP A ++LN + A + FE +RQR Sbjct: 175 EADYTNPTVFCVGGELRGLSKQVLEQVDQAVYIPYANGFKNALNAASACSVFCFEVLRQR 234 >UniRef50_B9E768 rRNA methyltransferase homolog n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E768_MACCJ Length = 246 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 21/237 (8%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G H V+ + + + + D+ ++ + Q + ++ S Sbjct: 31 IIEGEHLVEEAVNSNIDIEMILTV---NPDRLTEAMVAGSKQQ----YEITFKVAEKLSQ 83 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QGI A + ++ LD + DP N+G +R+ADAAG+ A Sbjct: 84 TEAPQGIYAVCNMKDG----------KDAELNRVIYLDRIQDPGNVGTIIRTADAAGLDA 133 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VI+ K N + + G+ +P+I + + + N I GT+ E Sbjct: 134 VIIAKGTVDIYNDKVLRASQGSVFHIPVIEM----DFDEVSSKFNGTIYGTSLEEARDYK 189 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVR 240 + + +V+G EG+G+ DE + IP+ G SLNV+V GI ++ V+ Sbjct: 190 EVIPSDNFMIVLGNEGQGVNPEILSATDENLYIPIYGRAESLNVAVCAGILMYHFVK 246 >UniRef50_A5IXH9 tRNA/rRNA methyltransferase n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXH9_MYCAP Length = 233 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 74/241 (30%), Positives = 124/241 (51%), Gaps = 14/241 (5%) Query: 1 MSEM-IYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLD 59 M ++ + G ++V ++ + V++L +L + I + + + Sbjct: 1 MKKLYMCGKNSVIDAIKA-KLPIEAVYVLSKSHADKLKEF------SNIKIVVKDASFFK 53 Query: 60 EKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAA 119 E + HQG + +K Y+ D+I + +LILD + DPHN GA +R+A+AA Sbjct: 54 EY-NSENHQGYLLFLKDFNYYEI----DVIKKDNPKTVLILDHIHDPHNFGAIIRTANAA 108 Query: 120 GVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EA 178 G+ +I+PKDRS + +T KV+ G V +I+V+N+A ++ L++ WI + E Sbjct: 109 GIKHIIIPKDRSTDVTSTVLKVSSGGFVGVKIIKVSNIASSIEKLKKWGFWIYSSLLDEN 168 Query: 179 DHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 + + G ALV+G E +G+ + D + IP G+V S+NVSVATGI LFE Sbjct: 169 AVPYNKVQYAGNCALVVGNEEKGISKPVVNATDVKVYIPQFGTVQSMNVSVATGILLFEL 228 Query: 239 V 239 V Sbjct: 229 V 229 >UniRef50_D1PXH3 SpoU rRNA methylase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PXH3_9BACT Length = 269 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 71/240 (29%), Positives = 109/240 (45%), Gaps = 7/240 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G+ + E + +F + DK I + ++ + Sbjct: 35 VVEGVRELIHCAHAGYE-IENLFCCRDILDKNPEAWKLDSLIGQTTIYEVTQAVYEKMAY 93 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 +G++A VK + + + P +++L+ V P NLGA LRSADA+ A Sbjct: 94 RGSTEGMMAEVKVKNRT-----LADLDLPESPLIVVLESVEKPGNLGAVLRSADASKADA 148 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VIV + N + + GA +VP + ++ M L+E NI I+ + Y Sbjct: 149 VIVCNPLTDLFNPNLIRSSIGAIFTVPTVACSS-QACMNFLKERNIKILTAQLQDSAPYY 207 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRS 243 S M G A+VMG E G+ R+ D I IPM G + SLNVSV+ I +FEAVRQRS Sbjct: 208 DSDMRGGTAIVMGTESTGLTDAWRKAADAHIRIPMLGQLDSLNVSVSAAILMFEAVRQRS 267 >UniRef50_B9KZB6 Possible 23S rRNA methyltransferase tsnR n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KZB6_THERP Length = 271 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 10/239 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G + ++ ++ R D ++ ++ G I + L E ++ Sbjct: 32 LVEGPKTIADAVQAGYRPSHLFYVPT-RLDPLEQKVVARAQAVGTRIIAVTERVLHEIAE 90 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 Q ++A + +P + + + F LI+D + DP NLG LRSA AGVHA Sbjct: 91 TMTPQAVVAV------FPIPSIPFRLPTAEPLFALIVDRLQDPGNLGTLLRSALGAGVHA 144 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 V++ N + A GA +P+ + +A + IV +A Sbjct: 145 VLLTPGTVDPFNPKVVRAAAGAHFHLPIATLDPVAIQREF---PGLEIVVARPQALRAYD 201 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + T A+V+G+E G+ + + IP+ G V SLN VA I LFEA RQR Sbjct: 202 ERDWTRASAVVIGSEAHGISAELARLAADEVRIPLRGGVESLNAGVAGSIILFEAARQR 260 >UniRef50_C5NX63 Putative tRNA/rRNA methyltransferase n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NX63_9BACL Length = 251 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 19/235 (8%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +I G H V+ L+ + +E+ + + E+ ++ + L S Sbjct: 28 YLIEGKHLVEEALDA--KVVEEIIVSESFEEYNIVDSFEG------DLIKVTDSVLKSIS 79 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 D QGIIA + + + + +LILD + DP NLG +R+ADA Sbjct: 80 DTITSQGIIAVCRI--------VKKELDINNYSKVLILDKIQDPGNLGTIIRTADAFNFD 131 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +I+ K ++ + G+ + +L + + E I T+ +AD + Sbjct: 132 CIILGKGTTSLYGQKVIRSTQGSNFHIDCFDNIDLVELIDEMHE--FNIFATSLKADKYI 189 Query: 183 YQSK-MTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 Q +TG++A+V G EG G+ + L+ I M G SLNVS+A GI + Sbjct: 190 EQLDNITGKVAVVFGNEGAGVSEEILSKVNNLLKISMPGRAESLNVSIAAGIVMH 244 >UniRef50_C6NZV4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZV4_9PROT Length = 261 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 58/241 (24%), Positives = 102/241 (42%), Gaps = 17/241 (7%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G H ++A L+ + + + ++D ++ L+ A V + S+ Sbjct: 35 LLDGSHLLRAFLDNGGKPKHLLLNEQAQQDAEIVALLDAC--VDVPQTQFEDALFAQLSE 92 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G++A + + F L+L+ + DP NLG+ LRSA AAG A Sbjct: 93 LKTPNGLLALIDIP--------AAQVEVAHSQFALLLEDIQDPGNLGSILRSAAAAGCDA 144 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIW--IVGTAGEADHT 181 V + + + + G ++ ++ +L + I+ + A + Sbjct: 145 VFMSPGCADAWSPKVLRAGMGGHFALSILESADLLKV-----ATGFTGKILAASLHARKS 199 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQ 241 LY + G+LA +G EG G+ + IPM G + SLN + AT +CLFEA RQ Sbjct: 200 LYDCNLRGKLAFAIGNEGAGLSPELLTAAQQHFIIPMQGKIESLNAAAATAVCLFEASRQ 259 Query: 242 R 242 R Sbjct: 260 R 260 >UniRef50_B2IK44 RNA methyltransferase, TrmH family, group 3 n=2 Tax=Beijerinckiaceae RepID=B2IK44_BEII9 Length = 293 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 71/233 (30%), Positives = 111/233 (47%), Gaps = 10/233 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +++G HAV+ L ++ + +K L ++ G+ + + L + Sbjct: 64 LLHGFHAVREALRSDQRTCLALYATEAAAEK----LAPDSKAAGLAPHIVTAEDLSRRLG 119 Query: 64 GAV-HQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 HQG++ +P ++P +L+LD +TDPHN+GA +R+A A V Sbjct: 120 SQTVHQGVLLEARPLEPLDITEIP-----TRSGVVLVLDQITDPHNVGAIVRTAAAFDVD 174 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 A++ + + L K A G E V ++ V NLAR + L N VG A+ Sbjct: 175 AIVTTERHAPALGGVLAKAASGGLEHVQIVPVVNLARALETLGRLNYLRVGLDSAAEADF 234 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL 235 Q + +ALV+G EG G+RRLTRE CD L + M G + SLNVS A + L Sbjct: 235 TQLPLQRPIALVLGGEGTGLRRLTREKCDFLARLDMPGKIKSLNVSNACAVVL 287 >UniRef50_D2R0C4 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0C4_9PLAN Length = 272 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 1/239 (0%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 +I G + L + + + G I +RQ +++ + Sbjct: 32 IIDGEREITRALGAGVVALELFVLDGVELSATSQQTMRHARESGATILPVSRQVMEKLAF 91 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 G + +I + + L D +A+ + +++GV P NLGA LRSADAAG+ Sbjct: 92 GDRVEEVILVAESPSPALDTFLQDKLAAKRDLLVAVVEGVEKPGNLGAILRSADAAGIDG 151 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLY 183 VIV R N A + + GA ++P+I +T + + + L+ ++ T + Sbjct: 152 VIVCGARLDLYNPNAIRASLGALFTLPVIGMT-VPQALAWLRMHQFQMLATRVDGAIDYT 210 Query: 184 QSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 + + GR A+++G+E EG+ R IS+PM G+V SLN+SV I +EA+RQR Sbjct: 211 TADLRGRTAIILGSEAEGLSREWLGDDIRAISLPMLGTVDSLNLSVTAAILFYEALRQR 269 >UniRef50_UPI0000ECA455 rRNA methyltransferase 1, mitochondrial precursor (EC 2.1.1.-). n=2 Tax=Gallus gallus RepID=UPI0000ECA455 Length = 317 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 18/259 (6%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRL--LPLIHALESQGVVIQLANRQYLD 59 SE+++G+ L +A +F+ + +RL + ++GV + R+ LD Sbjct: 54 SEILFGVAPCSMALSQARRDLFRLFLKRSGGPQRLVTSEFVLQAAARGVPVLHVGRRELD 113 Query: 60 EKSDGAVHQGIIARVKPGRQYQEND-----LPDLIASLDQPFLLILDGVTDPHNLGACLR 114 G VHQG+ P R + + L D + Q L L+ + DP NLGA LR Sbjct: 114 TLCGGRVHQGVCLEATPLRFKRLEEAEEPGLGDGESPNRQLLWLALEQIQDPMNLGALLR 173 Query: 115 SADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGT 174 SA GV V+ + S L T K + GA E + +L ++ E +VGT Sbjct: 174 SAYFLGVDRVVTSQRNSCPLTPTVSKASSGAMEVFDVYSTDDLRSFLKAKAAEGWEVVGT 233 Query: 175 AGEADH-------TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIP----MAGSVS 223 +++ + + + + LV+G+EG+G+ T+ C +++ IP + + Sbjct: 234 VSQSETVENVPVISCLEFRWNKPIILVIGSEGDGLSLETQLLCHQMLVIPSGRALHPGIE 293 Query: 224 SLNVSVATGICLFEAVRQR 242 SLNVSVATGI L Q+ Sbjct: 294 SLNVSVATGILLHSICSQK 312 >UniRef50_Q6AGD8 RRNA methyltransferase n=2 Tax=Actinobacteria (class) RepID=Q6AGD8_LEIXX Length = 277 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 53/244 (21%), Positives = 96/244 (39%), Gaps = 10/244 (4%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G AV L E E++ +R + A + G ++ Q L +D Sbjct: 38 LLEGPQAVAEALAFRSELLVELYATPTAL-ERHQDIAQAAAAAGTQVEFVTEQVLGTIAD 96 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QG +A + I + + IL+ V DP N G +R+AD+AG A Sbjct: 97 TVTPQGFVAVARQFPTSVRE-----IFAGSPALVAILEEVRDPGNAGTIIRAADSAGADA 151 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL- 182 V++ N + G+ +P+ +L + + + ++ + L Sbjct: 152 VVLTGRTVDLYNPKVVRSTTGSLFHIPVAVGADLPEVVSCARAAGLRVLAADIAGEDLLA 211 Query: 183 --YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFE-AV 239 ++ A V G E G+ D +++P+ G S+N++ A +CL+E A Sbjct: 212 ARTAGQLARPTAWVFGNEARGLPDEWLGLVDRAVAVPIYGRAESMNLATAASVCLYESAF 271 Query: 240 RQRS 243 QRS Sbjct: 272 AQRS 275 >UniRef50_C6HZU7 TRNA/rRNA methyltransferase (SpoU) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZU7_9BACT Length = 259 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 80/256 (31%), Positives = 123/256 (48%), Gaps = 25/256 (9%) Query: 7 GIHAVQALLERAPERFQEVFILKGRE-----DKRLLPLIHALESQGVVIQLANRQYLDEK 61 G H V +L P+ +++ + R D R +I S+G+ + +D Sbjct: 3 GFHPVMEVLSLRPDSVVHLYLREDRHGESRMDGRRREIIRVARSRGIPVDFLPGPAIDGL 62 Query: 62 ------SDGAV---------HQGIIARVKPGRQYQ-ENDLPDLIASLDQPFLLILDGVTD 105 S A HQG++AR++ + +D + + L+ +DGV D Sbjct: 63 FHRGQVSATASGGTGKGLPSHQGVVARIEEVATFPNLDDFLEASPGIAPSPLVAVDGVQD 122 Query: 106 PHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQ 165 P NLGA LR+ DAAGV V++P+ R A L+ T K + GA ++PL+R+ NL+ ++R L+ Sbjct: 123 PRNLGALLRTCDAAGVGGVLIPRRRVAPLSQTVAKTSAGALFTLPLVRIGNLSGSLRQLK 182 Query: 166 EENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSL 225 +E I D L LV+GAE +G+ R + D +PM G V SL Sbjct: 183 KEGYAIAALDLSGDPLPEGPLPGP-LVLVVGAEEKGVTRPVLDLADWRFRLPMKGKVQSL 241 Query: 226 NVSVATGICLFEAVRQ 241 N+SVA GI L+ RQ Sbjct: 242 NLSVAAGIFLY---RQ 254 >UniRef50_Q1G9C5 TRNA/rRNA methyltransferase n=28 Tax=Lactobacillus RepID=Q1G9C5_LACDA Length = 260 Score = 219 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 100/237 (42%), Gaps = 8/237 (3%) Query: 3 EMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKS 62 +I G H V+ L+ + +++E+ + + + +G + ++ S Sbjct: 30 YLIEGFHLVEEALKAS-VKYREILATEAALSRLAQ--LGLAYDEG-KLIKISQSVASHLS 85 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 Q I VK + N S + ++LD + DP N+G +R+ADAAG Sbjct: 86 STKNSQDIFMTVKINMTVKINRPKHFAFSYGK--WVLLDDLADPGNVGTIIRTADAAGFD 143 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGE-ADHT 181 VI+ N ++ G+ + LI+ +L + L+ +I + + + A Sbjct: 144 GVILSNKTVDLYNPKVQRSMQGSQFHLNLIKA-DLPDAIASLKAADIPVYASLLDPAAKQ 202 Query: 182 LYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 L ++AL++G E G+ DE + IP+ G SLN +VA GI ++ Sbjct: 203 LGDFAPVAQVALIIGNEAHGVSPEIEALADEKLYIPIKGRAESLNAAVAAGIMIYHF 259 >UniRef50_Q03G93 rRNA methylase n=1 Tax=Pediococcus pentosaceus ATCC 25745 RepID=Q03G93_PEDPA Length = 255 Score = 219 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 14/236 (5%) Query: 2 SEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEK 61 ++ G H V+ LE+A E ++ + + + + L + + L ++ + Sbjct: 29 KFLLEGRHPVETALEQATE-YEFLIVQEDFDLGELAEQVD-----NDKLILVTKEVANHI 82 Query: 62 SDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGV 121 SD QGI E D L+LD V DP N+G +R+ADAAG Sbjct: 83 SDTVHDQGIFLI----GYINEEDWQ--FPDDLSGKWLVLDNVQDPGNIGTMVRTADAAGF 136 Query: 122 HAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAG-EADH 180 V+ + N + G+ + L R+ NL + +R +++ I G+ E Sbjct: 137 TGVVFGDGTADFYNPKILRAMQGSQYHLQLKRL-NLEKWIRNCKDQGSVIFGSILDENAR 195 Query: 181 TLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 + + + +L+MG EG GM E D + IP+ GS SLNV+VA G+ +F Sbjct: 196 DYRKIDVPDQFSLIMGNEGNGMSERLIEMTDMNLYIPIKGSAESLNVAVAAGVLMF 251 >UniRef50_Q2RQU5 RNA methyltransferase TrmH, group 3 n=3 Tax=Rhodospirillaceae RepID=Q2RQU5_RHORT Length = 348 Score = 218 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 81/236 (34%), Positives = 120/236 (50%), Gaps = 12/236 (5%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++G HAV+A L+ K L L G ++ A+R+ ++ Sbjct: 117 WLFGRHAVEAALQNPER--------KALRLLALAGAAEGLPKGGPTVEPADREAIEAVVP 168 Query: 64 -GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 GAVHQG+ +V P Q ++ + + ILD V+DPHN+GA LRSA A G+ Sbjct: 169 PGAVHQGLALKVAPLSQPTVEEIARI---PGPSVVAILDQVSDPHNIGAVLRSAAAFGIR 225 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 AV+V S + T K A G E VPL+R NL++ + +E W G A+ TL Sbjct: 226 AVVVQDRHSPEETGTLAKSASGTLERVPLVRAINLSQALDTFKEHGFWCAGLDASAETTL 285 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEA 238 ++ + R +V+G+EG G+RRL R+HCD L+ + M V SLNVS A + +E Sbjct: 286 AEAALPERCVVVLGSEGAGLRRLVRDHCDLLVKLAMDSGVESLNVSNAAAVTFYEL 341 >UniRef50_C1QAT9 rRNA methylase, putative, group 3 n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1QAT9_9SPIR Length = 237 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 63/234 (26%), Positives = 116/234 (49%), Gaps = 6/234 (2%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 I +A+ + + + ++I K KR +I E + V+I+ ++ +++ Sbjct: 2 FITSKNAITEAI--SKNLVETLYI-KFPISKREKDIIKLAEKKKVLIKNVDKNEMEKIVG 58 Query: 64 GAVHQGIIARVKPGRQYQENDLPD-LIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 I A +K + + + D P + ILD +TD HNLGA +R+A G Sbjct: 59 KVYS--IAADIKENAEIGIENFLQKALEKKDNPLIFILDSITDVHNLGAIIRNAYFFGSS 116 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 +I+PKD SA +N +++ GAA +P+ TNL RT+ +++++ WI + E + +L Sbjct: 117 GIIIPKDNSAPINEKVYEISAGAAYHLPISIETNLNRTIELMKDKGFWIYYASEEGETSL 176 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLF 236 K A+++G E G+R + +++ D I I + SLNVS A+ + + Sbjct: 177 EDFKFNTPTAIILGNEHSGVRDILKKNSDGSIIINKSNDFDSLNVSAASAVIAY 230 >UniRef50_D1C2Y8 tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C2Y8_SPHTD Length = 293 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 63/240 (26%), Positives = 99/240 (41%), Gaps = 8/240 (3%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSD 63 ++ G+ + L+ +FI +E L L A ++G + L +D Sbjct: 41 LVEGVRLLTDALDAGAVP-SVLFIDAEKEHSALTELATAAHARGARVIPVTSALLRSIAD 99 Query: 64 GAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHA 123 QG++ V + + D+ A P LI DG+ DP NLG LR+A AG H Sbjct: 100 TETPQGVVGIV---PFPELGERGDIGAGATAPLFLIADGIRDPGNLGTLLRAALGAGAHG 156 Query: 124 VIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWI-VGTAGEADHTL 182 V V + + GA +P+ + A I + G+A+ Sbjct: 157 VYVTAGTTDPFAPKVVRAGMGAHFRLPIAYLDWRAPAP---HIAGIATRIAATGDAETVY 213 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 T +++G+E EG+ RE IP+AG + SLN ++A + LFEA RQR Sbjct: 214 DAIDWTAPACVIIGSEAEGLSPAAREFATGTARIPLAGGLESLNAAMAGTVILFEAARQR 273 >UniRef50_A9B181 tRNA/rRNA methyltransferase (SpoU) n=2 Tax=Chloroflexi (class) RepID=A9B181_HERA2 Length = 262 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 15/240 (6%) Query: 4 MIYGIHAVQALLERAPERFQEVFILKGRED-KRLLPLIHALESQGVVIQLANRQYLDEKS 62 ++ G+ V L A +++ + +R L+ + L S Sbjct: 34 VVEGVRLVGEALNFATPSLL-LYVPEQLASTERGQQLLDLIAQLP-NAFATTPAILAGLS 91 Query: 63 DGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVH 122 D QGIIA + + ++ +L+LDGV DP N+G LRSA+AAGV Sbjct: 92 DVETPQGIIAVIPMPQFTSQS----------ASLILMLDGVQDPGNVGTLLRSAEAAGVG 141 Query: 123 AVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTL 182 V+ + + + G +P++ N + L E ++ + Sbjct: 142 QVLCLPGTADVWSPKVVRSGMGVHFRLPIVDGLNWETALP-LIEHCQQRFAAVQDSPLSY 200 Query: 183 YQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQR 242 Q+ +T L++G E G+ T + I+IPM GS+ SLN +VA + LFEA RQR Sbjct: 201 DQADLTQPTVLIIGNEANGVSATTLSYS-STITIPMLGSLESLNAAVAGSVLLFEAARQR 259 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.196 0.617 Lambda K H 0.267 0.0599 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,874,512,473 Number of Sequences: 3077464 Number of extensions: 103422250 Number of successful extensions: 262674 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2669 Number of HSP's successfully gapped in prelim test: 541 Number of HSP's that attempted gapping in prelim test: 254580 Number of HSP's gapped (non-prelim): 3525 length of query: 243 length of database: 1,040,396,356 effective HSP length: 125 effective length of query: 118 effective length of database: 655,713,356 effective search space: 77374176008 effective search space used: 77374176008 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 92 (39.5 bits)