Phyre 2 alignment of P37443 with c1zkpD_

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Job Description | P37443
Confidence | 99.30% | Date | Thu Jan 5 11:55:38 GMT 2012
Rank | 17 | Aligned Residues | 208
% Identity | 18% | Template | c1zkpD_
PDB info | PDB header:structural genomics, unknown function | Chain: D: PDB Molecule:hypothetical protein ba1088; | PDBTitle: 1.5a resolution crystal structure of a metallo beta lactamase family2 protein, the elac homolgue of bacillus anthracis, a putative3 ribonuclease
Resolution | 1.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 492 | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 |  | . | . | . | . | . | . | . | . | . | 560 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Q | K | P | R | P | D | E | W | Q | L | Y | M | L | D | V | G | Q | G | . | . | . | . | . | . | . | . | L | A | M | V | I | A | R | N | G | K | A | I | L | Y | D | T | G | L | A | W | P | E | G | D | S | G | Q | Q | L | I | I | P | W | L | H | W | H | N | L | E | P | . | E | G | V | I | L | S | H | E | H | L | D | H
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | Y | F | Q | S | N | A | X | K | X | T | V | V | G | F | W | G | G | F | P | E | A | G | E | A | T | S | G | Y | L | F | E | H | D | G | F | R | L | L | V | D | C | G | . | . | . | . | . | . | . | . | . | S | G | V | L | A | Q | L | Q | K | Y | I | T | P | S | D | I | D | A | V | V | L | S | H | Y | H | H | D | H
Template Known Secondary structure |  |  | T | T | S |  |  | S |  |  |  |  |  |  |  |  | B | S | S | S |  |  | T | T |  |  | B | S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | T | T |  |  |  |  |  | T | T | T | S |  | G | G | G |  |  |  |  |  |  | S |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
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