31 c3cjpA_ Probab=99.85   E-value=7.8e-19  Score=132.04  Aligned_columns=226  Identities=15%

Q ss_pred             CEEECCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCC---------------------------
Q ss_conf             06433141278123355664223887889999999997399899993698765---------------------------
Q batch____         8 YTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMG---------------------------   60 (292)
Q Consensus         8 ~iD~H~Hl~~d~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iV~~~~~~~~---------------------------   60 (292)
                      +||+|+|++..                 ..+.++.+.++|+.+.+..+.....                           
T Consensus         2 IID~H~Hl~~~-----------------~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (262)
T c3cjpA_           2 IIDGHTHVILP-----------------VEKHIKIMDEAGVDKTILFSTSIHPETAVNLRDVKKEMKKLNDVVNGKTNSM   64 (262)
T ss_dssp             CEEEEEECCSS-----------------HHHHHHHHHHHTCCEEEEECCSCCGGGCCSHHHHHHHHHHHHHHHTTSSTTC
T ss_pred             EEEEEEECCCC-----------------HHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHCCCEEEECCCC
T ss_conf             68998502697-----------------8999999997699569983587885783108999984222035516630653


Q ss_pred             -----CCHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCH
Q ss_conf             -----788999998852187099999750653565556777989999999999997512258512012031366787897
Q batch____        61 -----RNAQFMLDVMRETGINVVACTGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGKITP  135 (292)
Q Consensus        61 -----~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (292)
                           ..+..+.+..+....+........+             ..............+...+..+.............. 
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~~gi~~~~~~~~~~~~~-  130 (262)
T c3cjpA_          65 IDVRRNSIKELTNVIQAYPSRYVGFGNVPV-------------GLSENDTNSYIEENIVNNKLVGIGELTPASGQIKSL-  130 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHSTTTEEEEECCCT-------------TCCHHHHHHHHHHHTTTTTCSEEEEECCCTTCGGGG-
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCEEECC-------------CCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHH-
T ss_conf             222136789999997630275002202125-------------788068999999971248750898458876788538-


Q ss_pred             HHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH--CCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEC
Q ss_conf             899999999999985398099728874101477899986--398855427745774102899999986696899403441
Q batch____       136 LEEKVFIAAALAHNQTGRPISTHTSFSTMGLEQLALLQA--HGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGK  213 (292)
Q Consensus       136 ~~~~~l~~~~~~a~~~g~pv~~h~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (292)
                            .++++.+.+.+.++.+|+...............  ...+..+.++.|+ +.+......+......+++++..+.
T Consensus       131 ------~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~P~~~~i~~H~-g~~~~~~~~~~l~~~~n~y~d~s~~  203 (262)
T c3cjpA_         131 ------KPIFKYSMDSGSLPIWIHAFNPLVLQDIKEIAELCKAFPKVPVILGHM-GGSNWMTAVELAKEIQNLYLDTSAY  203 (262)
T ss_dssp             ------HHHHHHHHHTTCCCEEECCSTTCCHHHHHHHHHHHHHSTTSCEEEGGG-GGGGHHHHHHHHHHCTTEEEECTTC
T ss_pred             ------HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEC-CCCCHHHHHHHHHHCCCCEEECCCC
T ss_conf             ------999999996499559992688777589899999999689985899628-8778899999996045561701226


Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
Q ss_conf             4775201458999999984198729996589888865558898812379999999998599989999999784888829
Q batch____       214 NSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQADVDVMLRENPSQFFQ  292 (292)
Q Consensus       214 ~~~~~~~~~~~~~~~~i~~~~~dri~~gSD~p~~~~~~~~~~~~~~~~~~~~~~~l~~~g~s~~~~~~i~~~Nparly~  292 (292)
                      ..        +.+.++++..|.+|||||||||+++             ....+..+.+.++|+++.++|+++||+|||+
T Consensus       204 ~~--------~~~~~~~~~~g~dril~GSD~P~~~-------------~~~~~~~~~~~~l~~~~~~~i~~~Na~rl~~  261 (262)
T c3cjpA_         204 FS--------TFVLKIVINELPLKCIFGTDMPFGD-------------LQLSIEAIKKMSNDSYVANAVLGDNISRLLN  261 (262)
T ss_dssp             SC--------HHHHHHHHHHSTTTEECCCCTTSSC-------------HHHHHHHHHHHCSSHHHHHHHHTHHHHHHHT
T ss_pred             CH--------HHHHHHHHHHCCCEEEEECCCCCCC-------------HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf             88--------9999999850923199903868999-------------8999999994798989999997133999958