12 c1vciA_ Probab=100.00  E-value=0  Score=359.38  Aligned_columns=232  Identities=27%

Q ss_pred             CCCCEEEEEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCHHHHHHH
Q ss_conf             98724999527998487655531323577998899986999988999999961125336872321010012352554210
Q batch____         1 MNQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGKTTLLKSISARLTPQQGEIHYENRSLYAMSEADRRRL   80 (252)
Q Consensus         1 ms~p~i~~~nl~~~~~~~~iL~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~~   80 (252)
                      |++  |+++|++++|+++++|+++||++++||+++|+|+||||||||+++|+|+++|++|+|+++|+++...++.     
T Consensus         4 M~~--i~~~~l~~~y~~~~~L~~isl~i~~Ge~~~l~G~nGsGKsTll~~l~g~~~p~~G~i~~~g~~~~~~~~~-----   76 (353)
T c1vciA_           4 MVE--VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPK-----   76 (353)
T ss_dssp             CCC--EEEEEEEEEETTEEEEEEEEEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGG-----
T ss_pred             EEE--EEEEEEEEEECCEEEEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHH-----
T ss_conf             108--9994189984888986323246889978999879998888999999668747600799888887457832-----


Q ss_pred             HHHHCCCCCCCHHHHCCCCCHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHH
Q ss_conf             12110254566122000110144432010000112226788756788885336532101014455661356788887531
Q batch____        81 LRTEWGVVHQHPLDGLRRQVSAGGNIGERLMATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNL  160 (252)
Q Consensus        81 ~~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LS~Ge~~rv~laral  160 (252)
                       ...+++++|+        .++.+|+.......   ........+.++++.+++ ....++++.+||+|||||++||||+
T Consensus        77 -~~~~~~~~~~--------~~~~~n~~~~~~~~---~~~~~~~~~~~~l~~~~~-~~~~~~~~~~LSgGq~qrv~iaral  143 (353)
T c1vciA_          77 -DRNISMVFQH--------MTVYENIAFPLKKF---PKDEIDKRVRWAAELLQI-EELLNRYPAQLSGGQRQRVAVARAI  143 (353)
T ss_dssp             -GTTEEEECCC--------CCHHHHHHTTCCCC---CHHHHHHHHHHHHHHTTC-GGGTTCCGGGCCSSCHHHHHHHHHH
T ss_pred             -HCEEECCCCC--------CEEEECCCCCCHHH---HHHHCCHHHHHHHHHCCC-CEEECCCCEECCCCHHHHHHHHHHH
T ss_conf             -3022023332--------00000121121000---011000025787631385-1011025203576615768888985


Q ss_pred             CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCH
Q ss_conf             12553045422335887113899999999998852983999938989999868989998599899964979998467998
Q batch____       161 VTHPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQGQVVESGLTDRVLDDPHHP  240 (252)
Q Consensus       161 ~~~p~ililDEp~~gLD~~~~~~i~~~l~~l~~~~~~tvi~ith~~~~~~~l~d~i~~l~~G~i~~~g~~~ei~~~~~~~  240 (252)
                      +.+|+++||||||++||+.++..+++.|+++.++.|+|+|++||+++++..+||||++|++|+++++|++++++++|.+.
T Consensus       144 ~~~p~llllDEP~s~LD~~~~~~~~~~l~~~~~~~g~tvi~vtH~~~~~~~~~drv~vl~~G~i~~~g~~~ei~~~p~~~  223 (353)
T c1vciA_         144 VVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSV  223 (353)
T ss_dssp             TTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHHHCCEEEEEESCHHHHHHHCSEEEEEETTEEEEEECHHHHHHSCSBH
T ss_pred             CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHCCEEEEEECCEEEEECCHHHHHHCCCCC
T ss_conf             07865999956101988899999999999999973982467730578888644889991047572545988997378982


Q ss_pred             HHHHHHHHHCCC
Q ss_conf             999998530288
Q batch____       241 YTQLLVSSVLQN  252 (252)
Q Consensus       241 ~~~~~~~~~~~n  252 (252)
                      |+..|++....|
T Consensus       224 ~~a~~~g~~~~~  235 (353)
T c1vciA_         224 FVATFIGAPEMN  235 (353)
T ss_dssp             HHHHHSSSSCCE
T ss_pred             HHHHHCCCCCCC
T ss_conf             278750887752