Phyre 2 alignment of P09373 with c3gd5D_

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Job Description | P09373
Confidence | 12.23% | Date | Thu Jan 5 11:02:15 GMT 2012
Rank | 62 | Aligned Residues | 36
% Identity | 19% | Template | c3gd5D_
PDB info | PDB header:transferase | Chain: D: PDB Molecule:ornithine carbamoyltransferase; | PDBTitle: crystal structure of ornithine carbamoyltransferase from gloeobacter2 violaceus
Resolution | 2.10 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 691 | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | G | Y | F | H | H | E | A | S | I | E | G | G | Q | H | L | N | V | N | V | M | N | R | E | M | L | L | D | A | M | E | N | P | E | K | Y | P | Q | L | T | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | V | S | F | T | V | A | M | Y | Q | L | G | G | Q | V | I | D | L | . | . | . | . | . | E | P | V | R | D | T | A | R | V | L | G | R | Y | V | D | G | L | A
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T | T |  | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |  |  |  |  |  | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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