11/01/2012 03:05:19 : INFO  : Run start: Wed Jan 11 03:05:18 GMT 2012
11/01/2012 03:05:22 : INFO  : Initialised job
11/01/2012 03:05:23 : INFO  : Renaming log file 'phyre2_20120111_030518.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/973cbb7f09cb6b84/phyre_20120111_030518.log'
11/01/2012 03:05:23 : INFO  : Initialised job:
Sequence
>batch____
MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFLAGATEATTTLWDKVME
GVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQTEAPLKRALIPFGGIKMIE
GSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRCRKSGVLTGLPDAYGRGRIIG
DYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTIRLREEIAEQHRALGQMKEMAAK
YGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMSFGRTSTFLDVYIERDLKAGKITEQ
EAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIWATESIGGMGLDGRTLVTKNSFRFLNT
LYTMGPSPEPNMTILWSEKLPLNFKKFAAKVSIDTSSLQYENDDLMRPDFNNDDYAIACC
VSPMIVGKQMQFFGARANLAKTMLYAINGGVDEKLKMQVGPKSEPIKGDVLNYDEVMERM
DHFMDWLAKQYITALNIIHYMHDKYSYEASLMALHDRDVIRTMACGIAGLSVAADSLSAI
KYAKVKPIRDEDGLAIDFEIEGEYPQFGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIP
TQSVLTITSNVVYGKKTGNTPDGRRAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYA
KDGISYTFSIVPNALGKDDEVRKTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAM
ENPEKYPQLTIRVSGYAVRFNSLTKEQQQDVITRTFTQSM

11/01/2012 03:05:24 : INFO  : Checked sequence
11/01/2012 03:05:26 : INFO  : Finding homologues with PSI-BLAST
11/01/2012 03:05:27 : INFO  : PSI-BLAST 3 iterations
11/01/2012 03:08:18 : INFO  : PSI-BLAST 5 iterations
11/01/2012 03:11:08 : INFO  : Finished PSI-BLAST
11/01/2012 03:11:09 : INFO  : Running Buildali to generate a3m file
11/01/2012 03:19:55 : INFO  : Converting to HMM
11/01/2012 03:19:57 : INFO  : Calibrating HMM
11/01/2012 03:20:25 : INFO  : Searching HMM database
11/01/2012 03:39:01 : INFO  : Finished buildali
11/01/2012 03:39:02 : INFO  : Predicting secondary structure
11/01/2012 03:39:06 : INFO  : Predicted secondary structure (PSI-Pred)
11/01/2012 03:39:07 : INFO  : Predicting Disordered regions
11/01/2012 03:39:09 : INFO  : Predicted Disorder (Disopred)
11/01/2012 03:39:10 : INFO  : Running memsat_svm check
11/01/2012 03:47:37 : INFO  : Globular protein
11/01/2012 03:47:37 : INFO  : Predicted Transmembrane (memsat_svm) ID '973cbb7f09cb6b84'
11/01/2012 03:47:38 : INFO  : Initialising fold library search
11/01/2012 03:47:39 : INFO  : Initialised search input
11/01/2012 03:47:40 : INFO  : Building Ensemble models
11/01/2012 03:47:42 : INFO  : Building hh.d1h16a_.model.1.pdb
11/01/2012 03:47:50 : INFO  : Building d1h16a_.1.pdb
11/01/2012 03:47:56 : INFO  : Building d1qhma_.2.pdb
11/01/2012 03:48:02 : INFO  : Building d1r9da_.3.pdb
11/01/2012 03:48:09 : INFO  : Building c2y8nC_.4.pdb
11/01/2012 03:48:16 : INFO  : Building c2f3oB_.5.pdb
11/01/2012 03:48:22 : INFO  : Building d1hk8a_.6.pdb
11/01/2012 03:48:29 : INFO  : Building c1hk8A_.7.pdb
11/01/2012 03:48:35 : INFO  : Building c2cvuA_.8.pdb
11/01/2012 03:48:42 : INFO  : Building c2wghA_.9.pdb
11/01/2012 03:48:49 : INFO  : Building c3hnfA_.10.pdb
11/01/2012 03:48:55 : INFO  : Building c1xjeA_.11.pdb
11/01/2012 03:49:02 : INFO  : Building c3r1rB_.12.pdb
11/01/2012 03:49:08 : INFO  : Building c3gr1A_.13.pdb
11/01/2012 03:49:14 : INFO  : Building c1pemA_.14.pdb
11/01/2012 03:49:23 : INFO  : Building d1rlra2.15.pdb
11/01/2012 03:49:29 : INFO  : Building d2bgxa1.16.pdb
11/01/2012 03:49:35 : INFO  : Building d1u5tb1.17.pdb
11/01/2012 03:49:41 : INFO  : Building c3gr0D_.18.pdb
11/01/2012 03:49:48 : INFO  : Building d1dq3a4.19.pdb
11/01/2012 03:49:56 : INFO  : Building c2jobA_.20.pdb
11/01/2012 03:50:18 : INFO  : Finished HH model building
11/01/2012 03:50:19 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
11/01/2012 03:50:58 : INFO  : html domain output complete ID '973cbb7f09cb6b84'
11/01/2012 06:57:19 : INFO  : Run end  : Wed Jan 11 06:57:19 GMT 2012
