BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (475 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P41067 Protein traB n=45 Tax=root RepID=TRAB1_ECOLI 969 0.0 UniRef50_B3WTP8 Protein TraB n=4 Tax=Enterobacteriaceae RepID=B3... 386 e-105 UniRef50_B6ICF4 TraB protein n=1 Tax=Escherichia coli SE11 RepID... 369 e-100 UniRef50_A4WGS4 TraB pilus assembly family protein n=4 Tax=Enter... 317 4e-85 UniRef50_B2VB09 TraB protein n=1 Tax=Erwinia tasmaniensis RepID=... 272 2e-71 UniRef50_A9L6K3 TraB pilus assembly family protein n=8 Tax=Gamma... 174 5e-42 UniRef50_A8QYQ1 TraB protein n=2 Tax=Legionellaceae RepID=A8QYQ1... 162 2e-38 UniRef50_C5F1X5 Sex pilus assembly protein n=1 Tax=Helicobacter ... 155 2e-36 UniRef50_B4RLS1 TraB n=9 Tax=Neisseria RepID=B4RLS1_NEIG2 150 8e-35 UniRef50_C9NPU6 IncF plasmid conjugative transfer pilus assembly... 150 1e-34 UniRef50_D0Z576 IncF plasmid conjugative transfer pilus assembly... 149 2e-34 UniRef50_A5KZF6 ATPase involved in DNA repair n=1 Tax=Vibrionale... 149 2e-34 UniRef50_Q8D6A1 ATPase involved in DNA repair n=5 Tax=Vibrionale... 146 2e-33 UniRef50_A7H3G6 Sex pilus assembly protein n=3 Tax=Campylobacter... 143 1e-32 UniRef50_C5SIK4 TraB pilus assembly family protein n=1 Tax=Astic... 140 8e-32 UniRef50_A3VN24 Putative conjugative transfer factor, TraB n=1 T... 130 8e-29 UniRef50_Q5NX52 Sex pilus assembly protein n=1 Tax=Aromatoleum a... 130 1e-28 UniRef50_Q2N5I1 Pilus assembly protein n=5 Tax=Erythrobacter Rep... 128 6e-28 UniRef50_Q0F360 TraB pilus assembly n=1 Tax=Mariprofundus ferroo... 125 5e-27 UniRef50_A0B4M9 TraB pilus assembly family protein n=1 Tax=Burkh... 124 8e-27 UniRef50_C5ANX7 TraB pilus assembly family protein n=2 Tax=Burkh... 123 2e-26 UniRef50_A1W656 TraB pilus assembly family protein n=6 Tax=Betap... 120 1e-25 UniRef50_Q2LTZ2 Pilus assembly protein n=1 Tax=Syntrophus acidit... 120 2e-25 UniRef50_A4JTP2 TraB pilus assembly family protein n=2 Tax=Burkh... 117 6e-25 UniRef50_A4XE89 TraB pilus assembly family protein n=6 Tax=Sphin... 117 8e-25 UniRef50_Q3IUW6 Putative conjugative transfer factor, TraB n=1 T... 117 1e-24 UniRef50_B2I3Y9 TraB pilus assembly family protein n=1 Tax=Acine... 116 2e-24 UniRef50_A1WDF7 TraB pilus assembly family protein n=2 Tax=Burkh... 113 1e-23 UniRef50_D0Z4T3 TraB pilus assembly n=1 Tax=Photobacterium damse... 112 4e-23 UniRef50_C1SHE3 TraB pilus assembly protein n=1 Tax=Denitrovibri... 111 7e-23 UniRef50_B4EQI2 Putative TraB conjugative transfer protein n=1 T... 109 2e-22 UniRef50_Q5ZTS2 Putative conjugative transfer protein TraB n=1 T... 109 2e-22 UniRef50_D0SGY7 TraB pilus assembly family protein n=1 Tax=Acine... 109 2e-22 UniRef50_Q6MBA0 Putative F pilus assembly protein traB n=1 Tax=C... 108 5e-22 UniRef50_C4NUW9 TraB n=11 Tax=Gammaproteobacteria RepID=C4NUW9_E... 107 7e-22 UniRef50_Q1MY41 TraB pilus assembly n=1 Tax=Bermanella marisrubr... 106 2e-21 UniRef50_D2U001 Conjugal transfer pilus assembly protein TraB (F... 105 4e-21 UniRef50_B7XGQ7 Putative pilus assembly protein n=2 Tax=Pseudomo... 104 8e-21 UniRef50_Q5WSC0 Putative uncharacterized protein n=2 Tax=Legione... 96 2e-18 UniRef50_C3NU45 IncF plasmid conjugative transfer pilus assembly... 95 6e-18 UniRef50_C4Z000 Putative TraB pilus assembly n=1 Tax=Rickettsia ... 94 1e-17 UniRef50_Q8L277 Pilus biogenesis protein n=4 Tax=Bacteria RepID=... 92 6e-17 UniRef50_B3EB62 TraB pilus assembly family protein n=3 Tax=Prote... 91 7e-17 UniRef50_C1MEJ9 Pilus biogenesis protein n=1 Tax=Citrobacter sp.... 91 7e-17 UniRef50_C0QUX1 TraB pilus assembly family protein n=1 Tax=Perse... 89 3e-16 UniRef50_C4K0M3 F pilus assembly protein TraB n=13 Tax=Rickettsi... 88 7e-16 UniRef50_A0R7R0 TraB pilus assembly family protein n=1 Tax=Pelob... 84 1e-14 UniRef50_D2U0R2 Conjugative transfer pilus assembly protein TraB... 84 1e-14 UniRef50_A9AU14 Putative uncharacterized protein n=1 Tax=Burkhol... 83 3e-14 UniRef50_Q19NS7 ThrB n=10 Tax=Enterobacteriaceae RepID=Q19NS7_ECOK1 80 2e-13 UniRef50_A0L342 TraB pilus assembly family protein n=1 Tax=Shewa... 77 1e-12 UniRef50_B7J829 Conjugal transfer protein, putative n=1 Tax=Acid... 76 3e-12 UniRef50_B0RL09 TraB pilus assembly family protein n=2 Tax=Yersi... 73 2e-11 UniRef50_B3CUL3 Putative conjugative transfer protein TraB n=1 T... 58 6e-07 UniRef50_A5CDW0 Conjugative pilus assembly protein n=23 Tax=Orie... 50 2e-04 UniRef50_C4YZI3 F pilus assembly protein TraB n=1 Tax=Rickettsia... 50 2e-04 UniRef50_D2W236 FH2 domain-containing protein n=2 Tax=Naegleria ... 49 6e-04 >UniRef50_P41067 Protein traB n=45 Tax=root RepID=TRAB1_ECOLI Length = 475 Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust. Identities = 475/475 (100%), Positives = 475/475 (100%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT Sbjct: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV Sbjct: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP Sbjct: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 Query: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST 240 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST Sbjct: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST 240 Query: 241 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK 300 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK Sbjct: 241 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK 300 Query: 301 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV 360 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV Sbjct: 301 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV 360 Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT 420 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT Sbjct: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT 420 Query: 421 QSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQGGGNDGK 475 QSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQGGGNDGK Sbjct: 421 QSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQGGGNDGK 475 >UniRef50_B3WTP8 Protein TraB n=4 Tax=Enterobacteriaceae RepID=B3WTP8_ECOLX Length = 454 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 220/465 (47%), Positives = 293/465 (63%), Gaps = 34/465 (7%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQ-EPVPDMTGVVD 59 MA++N IV+R+Q +V+G + G +S++++ A + EP PDMTGVV+ Sbjct: 1 MANVNKIVRRRQLALFIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVN 60 Query: 60 TTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQ 119 +FD+KV++ A E Q + Q + +++R E+ ++ + Q RI +L +N L Q Sbjct: 61 QSFDNKVQRSAIAEAQRLNKETQAEIKKLRTEMGIIGRDLKGSQERIRELEDENKLLQTQ 120 Query: 120 VKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVP-----PPTAFYP 174 ++A G N + + EP+P AS QG AV PPT F+P Sbjct: 121 IEA-GKNFDSLSAEPLPGALAS-------------------QGKAAVQAGEVLPPTTFWP 160 Query: 175 GNGVTPPPQVTYQSVPVPNRIQRKVFTR-NEGKQGPSLPYIPSGSFAKAMLIEGADANAS 233 G P V P + + FT + Q P P+I SGSFA+A+++EGADANAS Sbjct: 161 AGGGQAPVAPVMTPVQRPGMMDSQEFTLPDTTPQKPRFPWISSGSFAEAIVVEGADANAS 220 Query: 234 VTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGK 293 VTG+++TVPMQLR+TG V+MPN + +D TGCFV LEAWGDVSSERAIVRTR+ISC Sbjct: 221 VTGDKNTVPMQLRLTGKVQMPNDQEFDLTGCFVTLEAWGDVSSERAIVRTRSISCKLGDD 280 Query: 294 TIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATA 353 ID I GHVSF GKNGIKGEVVMRNG+IL +A G+GF+DGIG+G+E+AS VG+GATA Sbjct: 281 NIDQKIAGHVSFMGKNGIKGEVVMRNGQILLYAGGSGFLDGIGKGIEKASSTTVGVGATA 340 Query: 354 AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 + AG++ + G+GGG S AA+TLSDYYIKRAEQYHPVIPIGAGNEVT+VFQDGFQL+T+E Sbjct: 341 SMSAGEIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLE 400 Query: 414 EMALERTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNL 458 E + R + P SA + + G NT MLK L + Sbjct: 401 EARAKAAARRKQNQ------PSASSAPAAMPG-NTTDMLKHLQDF 438 >UniRef50_B6ICF4 TraB protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF4_ECOSE Length = 448 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 209/439 (47%), Positives = 270/439 (61%), Gaps = 32/439 (7%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 MA++N +V+RKQ L + ++ +G ++ GA Y+S V SG ++ P P+MTGVV Sbjct: 1 MANVNQLVRRKQNLRMAVIALGISAVGAGAWYMSTVKSSGKAAQTQQKAPPPNMTGVVSQ 60 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 TFD KV A ++Q TA++ +K+ + L + ++ D + +IE+ + A L + Sbjct: 61 TFDKKVSDAAVADIQHTASEAEKKLKAFESRLAKMEQREQDYRAKIEEQENELAILRAEQ 120 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFY-PGNGVT 179 +A+ N P P G+P P SF SV PPPTAFY PG G Sbjct: 121 EAMKEN-------------GGPELPAGQPVP-----SFGTGSSV--PPPTAFYQPGGGGE 160 Query: 180 P---PPQVTYQSVPVPNRIQRKVFTRNEGKQG-----PSLPYIPSGSFAKAMLIEGADAN 231 P YQ P P + T + G++ P LPYIPS SFA A++IEGADAN Sbjct: 161 ANNLAPVTQYQVTPQPKK-GLSSMTVDYGEKSAVSDKPLLPYIPSASFAPAVVIEGADAN 219 Query: 232 ASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD 291 ASVTGN PMQ R+TGLV MPN KTYD TGC V A+GD+SSERA++RT +SC K+ Sbjct: 220 ASVTGNSDPSPMQFRLTGLVRMPNDKTYDLTGCMVTAGAYGDISSERALIRTDRLSCHKN 279 Query: 292 GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGA 351 G IDMP KGHVSF+GKNGIKGE VMRNGKI+GWA+ AG VDGIG G+ + Q G GA Sbjct: 280 GHVIDMPFKGHVSFKGKNGIKGEPVMRNGKIIGWAFAAGAVDGIGSGVAKIGQETPGAGA 339 Query: 352 TAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKT 411 A+ V+ +GGGAS+ +TLSDYYIKRAEQYHPVIP+GAG EVTVVFQ+GFQLK Sbjct: 340 VASVSGSTVMNGALGGGASQVGKTLSDYYIKRAEQYHPVIPVGAGTEVTVVFQEGFQLKY 399 Query: 412 VEE--MALERTQSRAEEDN 428 +E + Q++A DN Sbjct: 400 TDEDKASTPARQAKAVVDN 418 >UniRef50_A4WGS4 TraB pilus assembly family protein n=4 Tax=Enterobacteriaceae RepID=A4WGS4_ENT38 Length = 466 Score = 317 bits (813), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 204/484 (42%), Positives = 282/484 (58%), Gaps = 60/484 (12%) Query: 5 NTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPV--PDMTGVVDTTF 62 N +R Q L V+ A+ GG ++ + + E PV P+MTGVV +F Sbjct: 6 NLKTRRTQLAVLATVIAVGAATAGGVMWYGN-----HQEQQKHPAPVAAPNMTGVVTASF 60 Query: 63 DDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAA---LAEQ 119 +++V A + Q + +++QY + +L NK + +KL + +A L +Q Sbjct: 61 NEQVNDAALAQQQAKTSALEQQYATLA-QLVAQNKLTTE-----QKLAEKDAEIQRLTDQ 114 Query: 120 V-KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSF----PPQGSVAVPPPTA--- 171 V KA G+N T TG+ P P G G P PG PV+ PP+ SV P A Sbjct: 115 VQKAPGSN--TTTGQQSP-----PAGQNGTPLPG--PVAAGQARPPEYSVTPNAPAATGV 165 Query: 172 -------FYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPS-LPYIPSGSFAKAM 223 FYPG + + F+ + K+ P+ LP+IPSGSF+ A+ Sbjct: 166 NMGQGAGFYPGG----------SGQRLTGGLSTTKFSYDSLKKKPTKLPWIPSGSFSDAV 215 Query: 224 LIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRT 283 +IEGADANASVTG ++T P+ LR+ G ++MPN+K Y A GCF+ E WGD+SSER VRT Sbjct: 216 MIEGADANASVTGQQNTSPVTLRLQGNIQMPNNKEYSADGCFIVGEIWGDISSERGTVRT 275 Query: 284 RNISC-LKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA 342 ++ISC LK+GK +DM +GHVS++GKNGI+G+ VMRNG I+G+A AG + G G+G++ A Sbjct: 276 QSISCVLKNGKHVDMEFQGHVSYQGKNGIRGKPVMRNGMIVGYAGAAGMLSGFGEGIKSA 335 Query: 343 SQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVV 402 + P+VGLGATA GAGDV K G GGGA+KAA TLS Y+IKRAEQYHPVI IGAGN+VTVV Sbjct: 336 ATPSVGLGATADVGAGDVFKQGFGGGANKAADTLSQYWIKRAEQYHPVIDIGAGNQVTVV 395 Query: 403 FQDGFQLKTVEEMALERTQSRAEE-----DNPESPVPVPPSAES---HLNGFNTDQMLKQ 454 FQ GF+L+T+E+ + + ++ N SP P S S + N D +L+Q Sbjct: 396 FQKGFRLETLEDAEDAKAKEELQKAGNAAQNAVSPQPASQSTTSGTASVGNINPDDVLRQ 455 Query: 455 LGNL 458 L Sbjct: 456 ASQL 459 >UniRef50_B2VB09 TraB protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB09_ERWT9 Length = 457 Score = 272 bits (696), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 182/486 (37%), Positives = 265/486 (54%), Gaps = 64/486 (13%) Query: 1 MASINTIVKRKQYLWL-GIVVVGTASAIGGALYLSDVDMSGNGETVAEQE-PVPDMTGVV 58 M +IN + KRKQ L G+++ G+ A G +YL+ D + + Q PV +GVV Sbjct: 1 MGNINMLTKRKQLATLIGVLIAGSVGA--GIVYLTAGDSKPAAQAIKPQSAPV---SGVV 55 Query: 59 DTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDD------QRRIEKLGQD 112 F ++V++ + Q A ++K+ ++++++ V N+ G+ + ++ L ++ Sbjct: 56 TNAFTEQVQKSVLQQQQERTAVLEKELDDLKKQ--VSNQPSGESADVQVLKATVDALLKN 113 Query: 113 NAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAF 172 A AEQ N A GEP V + QGS + P F Sbjct: 114 QKASAEQ-----NNGAHAVGEP--------------------EVKWNVQGSNSYSSPPVF 148 Query: 173 ---YPGNGVTPPPQVTYQSVPVPNR--IQRKVFTRNEGK-QGPSLPYIPSGSFAKAMLIE 226 GN PP ++ P P IQ F+ K +G LP+I SGSF A +IE Sbjct: 149 PVGQGGNNYVPP-----KNDPRPQIGGIQHTSFSWEHPKVKGNPLPWISSGSFINASMIE 203 Query: 227 GADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNI 286 GADANASVTG +S+ P+ + G +PN Y+ C V E +GD+SSER VRT +I Sbjct: 204 GADANASVTGQQSSTPVVFTLLGNASLPNGHKYNLDQCRVTGEIYGDISSERGEVRTDHI 263 Query: 287 SCLKDG-KTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP 345 SC G + +DMP KGHVS++GK GI+G+ VMRNGKI+ +A AG + G+G G+ + Sbjct: 264 SCNISGDRHVDMPFKGHVSYQGKEGIRGKPVMRNGKIIAYAGAAGVLSGLGSGISESGTT 323 Query: 346 AVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQD 405 +VG+GATA AG++ + GGGASKAA TLS Y+IKRAEQYHPVI IGAGN VTVVFQ+ Sbjct: 324 SVGIGATATPAAGEIARQAFGGGASKAADTLSQYWIKRAEQYHPVIDIGAGNAVTVVFQE 383 Query: 406 GFQLKTVEEMALERTQSRA------------EEDNPESPVPVPPSAESHLNGFNTDQMLK 453 GFQL T+E+ +++S A +D + +PPS + H N D +++ Sbjct: 384 GFQLTTIEDEIARKSESAAGQVVDKVAGNMSADDGARTLSSLPPSGQQHGAIINPDDVIR 443 Query: 454 QLGNLN 459 + +L+ Sbjct: 444 KAKDLD 449 >UniRef50_A9L6K3 TraB pilus assembly family protein n=8 Tax=Gammaproteobacteria RepID=A9L6K3_SHEB9 Length = 509 Score = 174 bits (442), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 145/483 (30%), Positives = 229/483 (47%), Gaps = 46/483 (9%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLS-DVDMSG--NGETVAEQEPVPDMTGVV 58 +++N K++ + V+ G + + GALYL+ D MS A P+ D V+ Sbjct: 20 SALNEANKKRNW-----VIAGVGATVLGALYLAGDAYMSAPKRAPETAAGNPI-DFGAVI 73 Query: 59 DTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNK----QRGDDQRRIEKLGQD-N 113 D F +K Q A T Q+ + QK +++ + ++ + + R D +R +E + Sbjct: 74 DKDFTEKDNQSALTAQQIALDKQQKAIDKMLKSMEAIERSNEANRLDLKRNLETFQLTVS 133 Query: 114 AALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFY 173 + +++ A AN + + V S G + P + G +PP + Sbjct: 134 EKIDDKINAATANAMQHSNNNVTD-EFSTQGIDASAYPVRQSTRY--LGEQTLPPRPSVG 190 Query: 174 PGNGVTPPPQVTYQSVPVP-----NRIQRKVFTRNEGKQGPSLP-------YIPSGSFAK 221 G + P YQ +P N I F N +LP Y+P+GSF Sbjct: 191 DGQSYSAP----YQGGAIPPPATQNGIDS--FALNWESPDQNLPKKRTPENYVPAGSFVT 244 Query: 222 AMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIV 281 A++ GADANA V G TVPM + T +PN K C V A+G++SS R IV Sbjct: 245 AVVTGGADANAGVNGQGDTVPMVFQTTNQGVLPNGKPSKLNNCTVLGAAYGEISSSRGIV 304 Query: 282 RTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMER 341 RT +SC+ + + ID+P++ V G+NGI+G +M+NGKI+ A +G + GIG+ + Sbjct: 305 RTTRLSCIFEDEIIDIPVEATVFNYGRNGIRGTAIMKNGKIVQMAGISGILTGIGETGKA 364 Query: 342 ASQPA--VGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEV 399 SQ LG+T++ D L G +S L+DYYIK AEQYHP+I + GN V Sbjct: 365 LSQTTSNSALGSTSSVNGADALLNLAGSASSSVGSKLADYYIKLAEQYHPIIELNPGNTV 424 Query: 400 TVVFQDGFQLKTVEEMALERTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQL-GNL 458 +VF GF L V E ++ ++ P SA + + ++ +L+Q+ GN+ Sbjct: 425 NIVFLKGFPLDPVGIQEYEEALAQQAQN--------PVSATAQILNTISNPLLEQMPGNI 476 Query: 459 NPQ 461 PQ Sbjct: 477 KPQ 479 >UniRef50_A8QYQ1 TraB protein n=2 Tax=Legionellaceae RepID=A8QYQ1_9GAMM Length = 457 Score = 162 bits (411), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 136/420 (32%), Positives = 202/420 (48%), Gaps = 48/420 (11%) Query: 53 DMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQD 112 D+TG+V+ +F D V A T Q ++KQ E+ + + K G+ ++ +L Sbjct: 52 DLTGIVEESFTDAVADQALTTQQTELESLKKQISELTQNI----KTMGEAHQK--ELQAQ 105 Query: 113 NAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAF 172 L QV L V A E + E + P PQ + P T Sbjct: 106 KEELTAQVHEL----VLANQEKQSHL-------EHQNNPSELNEVQNPQ--LWHNPNT-- 150 Query: 173 YPGNGVTPPPQVTYQSVPVPNRIQRKVF--TRNEGKQGPSL-----PYIPSGSFAKAMLI 225 Y N + + P RI F R K P+ Y+PS + +A+++ Sbjct: 151 YAMNTMMNSGTTLSDAAP---RIHTVSFRPKRRMKKPHPNFYLNPAHYVPSNTSVRAVIL 207 Query: 226 EGADANASVTG-NESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTR 284 GADA+ASV G +++ M + +PN + GC V ++GD+SSERA Sbjct: 208 GGADADASVNGQSKNNGVMLFKFLEDGTLPNGQRSRLRGCRVSANSYGDISSERAFATLY 267 Query: 285 NISCLKDGK-TIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA- 342 +SC G+ ID + G V F GK GIKG+ +MR+ K++ WA +G + G+ + A Sbjct: 268 RLSCAHPGQPIIDKEVTGWVFFNGKVGIKGKPLMRDNKVMTWAGVSGALSGVASAAQYAQ 327 Query: 343 SQPAVG-LGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTV 401 S A+G GAT+ + + GGASKAA TLS YY+KRAEQYHPVI +G+GN VTV Sbjct: 328 SVQAIGPYGATSVVPSSQIAPFAAYGGASKAADTLSAYYVKRAEQYHPVIQVGSGNVVTV 387 Query: 402 VFQDGFQLKTVE---EMALERTQSRAE--------EDNPESPV--PVPPSAESHLNGFNT 448 VF+DGF L+ E + A+ + +++ E ++NP S + VPP + NT Sbjct: 388 VFKDGFYLEPDEDKSQHAMNQVKAQHETQGLIASQDENPTSEMNFTVPPEVLGRIERLNT 447 >UniRef50_C5F1X5 Sex pilus assembly protein n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F1X5_9HELI Length = 443 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 111/359 (30%), Positives = 175/359 (48%), Gaps = 44/359 (12%) Query: 103 QRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGN--TP----- 155 +++I+ L N L +++ L + V + + E E Q N TP Sbjct: 93 KKKIDSLSITNQRLNTELETLK--------KTVGNLVTNKEKKEKESQSSNIETPKNVTL 144 Query: 156 --VSFPPQGSVAV----PPPTAF----YPGNGVTPPPQVTYQS--------VPVPNRIQR 197 + P G+V + P P G PP Q TY+ + N QR Sbjct: 145 NGIELPDLGNVNLYKDFPKPNESNNFGLEKTGEVPPIQETYEERTRALENPLVFNNHAQR 204 Query: 198 KV-FTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNS 256 + + E K+ YIP+GSF K +L+ G DA + +P+ +R+ +PNS Sbjct: 205 TIQEVKEEAKEKH---YIPTGSFVKVVLLNGVDAPTMTQAKTNPLPVLMRVVDTSVLPNS 261 Query: 257 KTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIKGHVSFR-GKNGIKGE 314 YD CF+ E +GD++SERA +RT +SC+ DG+ I++ KG VS GK G+KG Sbjct: 262 WQYDIKDCFITGEGYGDLTSERAYIRTNTLSCMANDGRHINLDFKGAVSGEDGKIGLKGR 321 Query: 315 VVMRNGKILGWAWGAGFVDGIGQ--GMERASQPAVGLGATAA---YGAGDVLKMGIGGGA 369 VV + G +L AGF+ G+G+ G + + G G T A + + G+ G Sbjct: 322 VVTKQGALLARTLIAGFLQGVGESFGQQDTTTIVSGSGTTTVPLDQTANEAFQQGLFQGL 381 Query: 370 SKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAEEDN 428 S +A+ L+D+Y+K A+Q PVI I AG E+TV+ D ++K++EE A + T + ++ N Sbjct: 382 SDSAEKLADFYLKMADQISPVIEISAGREITVITTDLTEIKSIEEEAKKSTSNNTKQPN 440 >UniRef50_B4RLS1 TraB n=9 Tax=Neisseria RepID=B4RLS1_NEIG2 Length = 437 Score = 150 bits (380), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 127/442 (28%), Positives = 208/442 (47%), Gaps = 57/442 (12%) Query: 9 KRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTF------ 62 +++Q G+V A+ +G A+Y+ + GN + AE V + ++ T F Sbjct: 14 RKRQLAIAGMVAGSMAAIVGSAIYV----IEGNKKKSAEVTQVQNKRQILRTDFTSPQAG 69 Query: 63 --DDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 D+ + + + A + + E + +EL K+ + + LG D + Sbjct: 70 ITDNSLWMNTESSKIEYANRKISELETMVQELK--EKENSSNPDTSKGLGPDGLGKPPAI 127 Query: 121 KALGANPVTATGEPVPQMP-ASPPG-------------PEGEPQPGNTPVSFPPQGSVAV 166 +G N P +P +PP E E QPG T GSV Sbjct: 128 SGIGDNGRLPPAPPAGTLPNGAPPADRPIERKIVSGSMSEAELQPGTT-------GSV-- 178 Query: 167 PPPTAFYPGNGVTPPPQVTYQSVPVPNRIQR----------KVFTRNEGKQGPSLPYIPS 216 P V PQ+ ++ V ++ R KV ++GK YIPS Sbjct: 179 ---NTGNPNENVRVSPQLK-EAEWVKSKTPRMNIEVVEDGGKVVV-SQGKFRARDSYIPS 233 Query: 217 GSFAKAMLIEGADA-NASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVS 275 G+F +++L+ G DA N S P+ +R+T ++PN Y+ CFV +A+GD+S Sbjct: 234 GTFFRSVLLGGVDAPTGGEAQNASPHPVLMRVTDFAQLPNRFKYNFRECFVTGQAYGDIS 293 Query: 276 SERAIVRTRNISCL-KDGKTIDMPIKGHVSFR-GKNGIKGEVVMRNGKILGWAWGAGFVD 333 SERA +R +N+SC+ DG+ IDMP+KG+V+ GK G++G +V + G++L A +G + Sbjct: 294 SERAYIRLQNLSCVGTDGRAIDMPVKGYVAGEDGKTGVRGNLVTKQGQLLANALMSGVIS 353 Query: 334 GIGQGMERASQPA--VGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVI 391 G+G+G+ A + G+T + D + GI G AA L++YYIK A++ PV+ Sbjct: 354 GMGKGVSEAFKVTNNTAFGSTTSIRGSDQYRAGIASGIGGAADRLAEYYIKLADKVFPVV 413 Query: 392 PIGAGNEVTVVFQDGFQLKTVE 413 + AG +V VV G ++ T E Sbjct: 414 EVNAGRQVDVVLTQGIEIDTGE 435 >UniRef50_C9NPU6 IncF plasmid conjugative transfer pilus assembly protein TraB n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU6_9VIBR Length = 462 Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 127/439 (28%), Positives = 186/439 (42%), Gaps = 48/439 (10%) Query: 7 IVKRKQYLWLGIV-VVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDK 65 I KR ++ ++ V+ A I ++ ++ D A P ++D F D Sbjct: 24 IAKRNTWVSASVIGVLAIAGIIVAWVFRTESDHP------ATLSPPLHFEHIIDPGFTDL 77 Query: 66 VRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGA 125 +Q A + + +Q I+ +L + KQ + +E+ Q AL Sbjct: 78 DQQSALAHQDLALQALTQQLTGIQEQLKQVQKQSERQSKELERKLQHLEALGVPSDTHEL 137 Query: 126 NPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVT 185 T + +P PA P EP S P Q ++ P P N P Sbjct: 138 TLGTPSSQPALPSPAVTPSLSLEP-------SSPTQATLEADTPWLEEPTNMNMP----R 186 Query: 186 YQSV-------PVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNE 238 Y SV PV + K Y+PSGSF AM+ GAD NA V Sbjct: 187 YHSVDFIWSAPPVKKHVSLKT-------------YVPSGSFVTAMVTGGADTNAGVLAQG 233 Query: 239 STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISC-LKDGKTIDM 297 TVP+ + +PN + C + A+G+VSS R +VRT ISC L DG ID Sbjct: 234 DTVPLVFQTLNRGILPNGQPSRLDQCTITASAYGEVSSSRGVVRTDKISCVLDDGTLIDQ 293 Query: 298 PIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAV--GLGATAAY 355 +KG G+NGI+G +++NG I+ A AG + G+G+ + S+ LGAT Sbjct: 294 AVKGTAFNFGRNGIRGTTLLKNGDIVQMAGLAGILTGLGETGKALSEHTTLHPLGATQTL 353 Query: 356 GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEM 415 + +G + LSDYYIK AE YHP++ I G V +VF +GF L + Sbjct: 354 KSDQAPLNLLGHAGATVGAKLSDYYIKLAETYHPIVEINPGTVVNIVFLEGFTLTPLN-- 411 Query: 416 ALERTQSRAEEDNPESPVP 434 QS A+E P++ P Sbjct: 412 -----QSGAQEVAPQTSRP 425 >UniRef50_D0Z576 IncF plasmid conjugative transfer pilus assembly protein TraB n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z576_LISDA Length = 457 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 115/394 (29%), Positives = 175/394 (44%), Gaps = 40/394 (10%) Query: 50 PVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKL 109 P PD V+ F DK + A Q T ++K E+++E L++Q R+E+ Sbjct: 25 PSPDFEPVITEDFTDKDAKSALQAQQRTIIALEKSVSELKKERQRLSEQVATGLDRLEQR 84 Query: 110 GQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPP- 168 DN+ E+ + L N + A + P++ P S P GS+ P Sbjct: 85 LNDNS---EETERLINNNLDAFRDSATTDPSNSVTP-----------SLDPFGSLDQYPQ 130 Query: 169 ----PTAFYPGNGVTPPPQVTYQSVPV-----PNRIQRKVFTRNEGKQGPSLPYIPSGSF 219 P + + + P T + + P + R Y+P+GSF Sbjct: 131 VPTAPRGYLDDHSLKDIPTTTRRGIQTFSYRWPKMASETTYRRTSDN------YVPTGSF 184 Query: 220 AKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERA 279 A+L+ ADANA V T P+ R +PN K CFV +G++SS R Sbjct: 185 VTAVLMGAADANAGVNAQGDTAPIVFRTIHEGILPNGKRSRIKDCFVTASVYGEISSNRG 244 Query: 280 IVRTRNISCL--KDGK--TIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGI 335 I R +SC+ +DG+ +D+P++G +NG++G VMRNGKI+ A +G G+ Sbjct: 245 IARLNRMSCIFDEDGEEDILDIPVRGTAFSFARNGMRGTPVMRNGKIIQMAGISGLFTGL 304 Query: 336 GQGMERASQPAVGLGATAAYGAGD----VLKMGIGGGASKAAQTLSDYYIKRAEQYHPVI 391 G + AS + G + D +L MG G L+DYYIK AEQYHP+I Sbjct: 305 GDTAKNASSSTIT-GPSGVVSTVDPSKALLNMG-GSALENIGSKLADYYIKLAEQYHPII 362 Query: 392 PIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAE 425 + G+ V +VF +GF L + E+ S E Sbjct: 363 ELNPGSVVNLVFLEGFPLDPLMRDGYEQRLSAQE 396 >UniRef50_A5KZF6 ATPase involved in DNA repair n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZF6_9GAMM Length = 383 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 82/217 (37%), Positives = 124/217 (57%), Gaps = 4/217 (1%) Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 Y+PSG+F A + GADANA G T P+ + +PN + C + +G Sbjct: 144 YVPSGTFVTAKITGGADANAGAFGQSDTAPIVFQTVHEGVLPNGEKSHLKDCTIIGSVYG 203 Query: 273 DVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFV 332 D+SS R + RT +SC++DG+ +D+P++G V G+NGI+G ++RNGKI+ A +G + Sbjct: 204 DLSSSRGVARTHTLSCIRDGRILDIPVQGTVFNFGRNGIRGTSILRNGKIVQMAGISGIL 263 Query: 333 DGIGQ-GMERASQPAV-GLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPV 390 G+G+ G AS + LG+T++ + DV +G S+ LSDYYI AE YHP Sbjct: 264 TGLGEAGAGLASTTSTSALGSTSSINSEDVGLSLLGNATSEVGSKLSDYYIALAELYHPF 323 Query: 391 IPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAEED 427 I I G V +VF GF L +E A++R +R E++ Sbjct: 324 IEINPGGIVNIVFTKGFPLD--DEEAIKRYVARQEKE 358 >UniRef50_Q8D6A1 ATPase involved in DNA repair n=5 Tax=Vibrionales RepID=Q8D6A1_VIBVU Length = 493 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 114/403 (28%), Positives = 188/403 (46%), Gaps = 43/403 (10%) Query: 46 AEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRR 105 + QEPV + +++ F + Q A + Q T + ++KQ ++ + + + + +R+ Sbjct: 63 SHQEPV-EFGAIIEQDFVETDNQSALSLQQKTLSALEKQIADLTKSMRT---HKEETERK 118 Query: 106 IEKLGQDNAALAE-QVKALGANPVTATGEPVPQMPAS--------PPGPEGEPQPGNTPV 156 IE+ + A L E QV+ N + ++ + P +P N+ Sbjct: 119 IEQAKEKTARLVEEQVREEFRNKEAQLQSRIDELEHNTSELVNTEPYSTIHTQRPMNSSE 178 Query: 157 SFPPQGSVAVPP-PTAFYPGNGVTPPPQVTYQ-SVPVPNRIQRKVFTRNE---------- 204 +F G +PP P A N Q+ YQ S +P F RNE Sbjct: 179 TF---GQHKLPPRPIA--SSNNNPDMAQMQYQPSEQIP-------FNRNEFDSFNFFWES 226 Query: 205 ---GKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDA 261 + Y+P+G+F A++ GAD NA V G T P+ + +PN + Sbjct: 227 DETTYHRTTENYVPTGTFVTAVVTGGADTNAGVLGQGDTTPVVFQTIHEGILPNGEKSKL 286 Query: 262 TGCFVGLEAWGDVSSERAIVRTRNISCLKD-GKTIDMPIKGHVSFRGKNGIKGEVVMRNG 320 + C + ++G++SS R I+RT +SC++D G +D+ IKG G+NGI+G +++NG Sbjct: 287 SNCTITGSSYGEISSSRGIIRTNRLSCIQDEGHILDVAIKGTAFNFGRNGIRGTTILKNG 346 Query: 321 KILGWAWGAGFVDGIGQGMERASQ--PAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSD 378 +I+ A AG ++GIG+ + SQ G T++ + D +G S + LSD Sbjct: 347 EIVQMAGIAGILNGIGETGQALSQTTSTSAFGTTSSINSQDAALNLLGNATSSVGEKLSD 406 Query: 379 YYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQ 421 YYI AE YHP++ I G V +VF +GF L + ER Q Sbjct: 407 YYIGLAELYHPIVEINPGAVVNIVFLEGFPLDPLMAEEYERQQ 449 >UniRef50_A7H3G6 Sex pilus assembly protein n=3 Tax=Campylobacterales RepID=A7H3G6_CAMJD Length = 446 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 80/209 (38%), Positives = 119/209 (56%), Gaps = 8/209 (3%) Query: 214 IPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGD 273 IP+GS KA+L+ G DA +P+ +++T L +PN YD CF+ E +GD Sbjct: 225 IPTGSIVKAVLLSGMDAPTMTQAKTEPLPVLMKVTDLSILPNRWGYDVNECFLMGEGYGD 284 Query: 274 VSSERAIVRTRNISCLKD-GKTIDMPIKGHVSFR-GKNGIKGEVVMRNGKILGWAWGAGF 331 ++SERA +R NISC+ + G+ I M +KG + GK G++GEVV + G +L AGF Sbjct: 285 LTSERAYIRVNNISCVTNKGQKIYMAMKGAATGEDGKLGLRGEVVTKQGALLARTLIAGF 344 Query: 332 VDGIGQGMERASQPAV--GLGATAA----YGAGDVLKMGIGGGASKAAQTLSDYYIKRAE 385 + G+G+G +Q G G T A L+ G G SK+A+ L+D+Y+K A+ Sbjct: 345 LQGVGEGFANQNQIVTQNGFGGTTTTNSNMSASATLQTGAFKGLSKSAEKLADFYLKMAD 404 Query: 386 QYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 Q PVI I AG E+ ++ +LKT+EE Sbjct: 405 QVSPVIEIAAGREINIITTATLELKTLEE 433 >UniRef50_C5SIK4 TraB pilus assembly family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIK4_9CAUL Length = 442 Score = 140 bits (354), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 121/429 (28%), Positives = 195/429 (45%), Gaps = 44/429 (10%) Query: 9 KRKQYLWLGIVVVGTASAIGGALYLSDV--------DMSGNGETVAEQEPVPDMTGV-VD 59 K LW I+ G A+ +GG S V E V + +GV + Sbjct: 26 KNSTLLWASII--GVAAVLGGFAVYSAVFPPDPKPKQKLTKEEAVRIKGTASVASGVPIS 83 Query: 60 TTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQ 119 T ++ + ++M Q++ + + E D LN + D+ ++ Q AE+ Sbjct: 84 PTAENAQLKSERSDMDARLRQLEAENAALSAERDTLNSRNLQDREEAYQMLQ-----AER 138 Query: 120 VKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSF---PPQGSVAVPPPTAFYPGN 176 + G++P G P + P P P P + P+ S A GN Sbjct: 139 DRRGGSDPHPTRGYPTEAADGAGFSPTPNPAPSLQPDANGKERPRRSFRTVSMNASSAGN 198 Query: 177 GVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTG 236 G V ++ V +RI+ F +E Y+P S+A A ++ G D V+G Sbjct: 199 GELAAQPVAQKASAVTDRIE--TFDPSE--------YVPPNSYATARVLVGVDMQTGVSG 248 Query: 237 NESTVPMQLRIT----GLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KD 291 N P+ LRI G+ ++ D GC + A+ ++SSE+ V+ + I+C K+ Sbjct: 249 NSDPKPVLLRIRTPAFGVGMDGKFQSSDLRGCTINGAAYAELSSEKVYVKLQRITCEGKN 308 Query: 292 GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVG--L 349 GK + P++G+V+++GK G++G+VV R G A+ AG G+GQ ME+ Q + Sbjct: 309 GKFLTSPVEGYVTYKGKTGVRGKVVRREGDYASKAFIAGTFQGLGQAMEKNVQGTISGKF 368 Query: 350 GATAA--------YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTV 401 G + A +G++ + +G G S A L+DYYIKRAEQY PVI + G +V + Sbjct: 369 GESDAGSIINARPLSSGEIGQASVGSGVSNAGGMLADYYIKRAEQYQPVIEMPTGIDVEI 428 Query: 402 VFQDGFQLK 410 VF GF+ K Sbjct: 429 VFLAGFRFK 437 >UniRef50_A3VN24 Putative conjugative transfer factor, TraB n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN24_9PROT Length = 418 Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 108/338 (31%), Positives = 159/338 (47%), Gaps = 42/338 (12%) Query: 90 RELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEP 149 R+L+ L R D ++K D AA+ E + A+ T T EP +P S P G+P Sbjct: 97 RDLE-LAATRAD----LQKTRDDAAAMVEDMAGRVASVSTRT-EPALGLPTSEPSAIGDP 150 Query: 150 --QPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKV-----FTR 202 + G P S A P P + P V P Q + +V F Sbjct: 151 FGRRGVLP-------SGAAPQPLSVEP---VIPRTVQVLQFAAATEALDTRVLEPAVFRL 200 Query: 203 NEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITG----LVEMPNSKT 258 +EG Y+P ++A A ++ G D + V + P+ LRITG +++ Sbjct: 201 DEGD------YVPPNAYAPAHVLVGVDMSTGVRLSADPKPVLLRITGPARSVLQNGRQLD 254 Query: 259 YDATGCFVGLEAWGDVSSERAIVRTRNISCLK-DGKTIDMPIKGHVSFRGKNGIKGEVVM 317 D TGC V A ++SSER V+ + I+C + DG+ + P++G+++ GK G++G VV Sbjct: 255 VDLTGCLVNGAAHAELSSERVYVKLQKITCDRGDGEVAESPVEGYIAQLGKVGVRGRVVS 314 Query: 318 RNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAA--------YGAGDVLKMGIGGGA 369 R G I+ A AG V G G+G+ R + G AG++ G G G Sbjct: 315 REGDIVSKALVAGVVGGFGRGIARNTDQIFAAGTAGGSTIIGQDNLSAGEIAAGGFGEGL 374 Query: 370 SKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGF 407 + AA T+SDY I RAEQY PVI + G +V +VF GF Sbjct: 375 ATAADTVSDYLIDRAEQYQPVIEMPTGIDVEIVFLSGF 412 >UniRef50_Q5NX52 Sex pilus assembly protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX52_AZOSE Length = 420 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 8/208 (3%) Query: 211 LPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEA 270 + Y+P GS + L+ G D S ++ VP LR+ +PN T+D CFV + Sbjct: 213 IAYLPMGSQFEGFLLNGMDVPTSNAKSKDPVPAVLRVKTDAILPNHFTHDVRECFVIISG 272 Query: 271 WGDVSSERAIVRTRNISCLK-DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWG 328 +GD+SSERA++RT SC+K DG I+ P++G+ V G+ GIKGE+V + G+++ + Sbjct: 273 FGDLSSERAVMRTEGFSCIKDDGAVIEGPMEGYVVGDDGRVGIKGELVSKQGQMIARSLT 332 Query: 329 AGFVDGIGQGMERASQP------AVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIK 382 AGF+ GI +G++ P +G + GDVL G GAS AA ++++Y++ Sbjct: 333 AGFLGGIAKGLQPWGTPDQWANTQTSVGQAERFEMGDVLTAGAMSGASSAANQVANFYLE 392 Query: 383 RAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 A + PV+ I A T+V G ++K Sbjct: 393 MAREMFPVVEIDAARRATIVLTKGLEVK 420 >UniRef50_Q2N5I1 Pilus assembly protein n=5 Tax=Erythrobacter RepID=Q2N5I1_ERYLH Length = 438 Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 82/215 (38%), Positives = 117/215 (54%), Gaps = 16/215 (7%) Query: 210 SLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVE--MPNSK--TYDATGCF 265 S Y+P S+A A +I G DA+ V +P+ LRITG M +K T D TGC Sbjct: 224 SRDYLPPNSYAPATVIVGVDASTGVASQSDPLPVVLRITGPARSVMRGNKLLTTDITGCL 283 Query: 266 VGLEAWGDVSSERAIVRTRNISCLKDGKTIDMP-IKGHVSFRGKNGIKGEVVMRNGKILG 324 V A GD+S+E+ V+ ++C + G + +KG +SF G++G++G VV R G ++ Sbjct: 284 VNGAARGDLSAEKVYVKLVRMTCAQPGGRFAVSEVKGFISFAGRSGVRGRVVSREGSLVS 343 Query: 325 WAWGAGFVDGIGQGMERASQPAVGL--------GATAAYGAGDVLKMGIGGGASKAAQTL 376 A AG V G G+G S A G+ G A D+L G G GA +AA T+ Sbjct: 344 QALLAGIVGGFGRGF---SANANGIFAGQVGSDGQREALSPTDILAGGFGQGAGEAADTV 400 Query: 377 SDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKT 411 S Y I+RAEQY PV+ + G EV +VF DG +++ Sbjct: 401 SRYLIERAEQYQPVVEMPTGIEVEIVFLDGVHVRS 435 >UniRef50_Q0F360 TraB pilus assembly n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F360_9PROT Length = 445 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 105/353 (29%), Positives = 162/353 (45%), Gaps = 33/353 (9%) Query: 72 TEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTAT 131 T+ + MQ++ E+R+E+D L ++R D +G+ + + + L NP + Sbjct: 102 TKSESDMRNMQQEIRELRQEIDRLRQERAD-----AGVGESHFNVEDGGSLL--NPTLPS 154 Query: 132 GEPVP-QMPASPP--GPEGEPQPGNTPVSFPPQG----SVAVPPPTAFYPGNGVTPPPQ- 183 P P PAS P GP P G T PQ S P T P +PP Sbjct: 155 LPPQPMNAPASIPAIGPNTAPT-GTTIAPITPQPINLPSGQAPATTGMPPAQNPSPPQSG 213 Query: 184 ---VTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST 240 V + S PV K+ + SF A L+ G DA ++ Sbjct: 214 GMLVVHMSPPV----------DEPAKENDDRSAWLAISFTPARLLNGLDAATGGQAQQNP 263 Query: 241 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPI 299 P+ L +T + +MPN + CF+ +GD+SSERA +R ++C+ DG I+ I Sbjct: 264 QPVLLEVTDMTQMPNRYRENFRECFITAAGYGDISSERAYLRLEKLACIDDDGHAIEEAI 323 Query: 300 KGHVSFR-GKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMER--ASQPAVGLGATAAYG 356 G+V+ GK G++G +V + G++L A AG GIG + ++Q LG T+ Sbjct: 324 DGYVTGEDGKVGMRGRLVSKQGQVLAKALLAGIASGIGDAFTQSLSTQSVSPLGVTSTIQ 383 Query: 357 AGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 G + GI G KA L+D+YI++A + +PVI + AG V V+ G +L Sbjct: 384 PGAAARAGIYSGVGKALNKLADFYIQQANKLYPVIEVDAGRAVDVIINRGVRL 436 >UniRef50_A0B4M9 TraB pilus assembly family protein n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0B4M9_BURCH Length = 440 Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 105/360 (29%), Positives = 159/360 (44%), Gaps = 40/360 (11%) Query: 58 VDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALA 117 +D+ DD V Q + K +E+ + +D + D AAL Sbjct: 79 IDSRADDAVSQMKA---------LSKAQDELSKRIDAMKSTPASAPAPASGATSDRAALD 129 Query: 118 EQVKALGANPVTATGEPVPQMPASPPGPEGEP-QPGNTPVSFPPQGSVA-VPPPTAFYPG 175 + P+ G P P P G+ +PG + PP+ ++ PT G Sbjct: 130 K--------PIPLNGAPAKTGAILNP-PFGKSGKPGVDMAAAPPKLAIIQFNTPT----G 176 Query: 176 NG---VTPPPQVTYQSVPV--PNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADA 230 NG V P Y S+P+ R Q+ N K+ + +IP SF + ++ G DA Sbjct: 177 NGADCVDP----RYSSLPLDQATRAQQDCLKANGKKK---ISFIPGSSFVRVFMMNGVDA 229 Query: 231 NASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISC-L 289 +P+ L++ +PNS+ D T C + +A+GDVSSER +R + C L Sbjct: 230 PTGGEAQHDPLPVFLQVLDPANLPNSRKLDITECRILTQAYGDVSSERTHMRGETLDCIL 289 Query: 290 KDGKTIDMPIKGHVSFR-GKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPA-- 346 K+G+T++MPIKG+V GK G++G +V + G L + AG GIGQ +++ Sbjct: 290 KNGRTVEMPIKGNVMGEDGKEGVRGRLVSKAGSALAMSVFAGISSGIGQAFNQSANTLSN 349 Query: 347 VGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDG 406 LG+T+ V + IG G S A L YYI+ AE+ PVI G V G Sbjct: 350 TALGSTSIINPSQVGRAAIGSGVSGGADALKQYYIRTAEKLFPVIETDGGRIVEFAVTKG 409 >UniRef50_C5ANX7 TraB pilus assembly family protein n=2 Tax=Burkholderia glumae BGR1 RepID=C5ANX7_BURGB Length = 445 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 97/355 (27%), Positives = 163/355 (45%), Gaps = 30/355 (8%) Query: 79 AQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVK--------ALGANPVTA 130 AQ + Q+ E++++LD N + + +++K+ Q L +Q + + P A Sbjct: 63 AQSEAQFAEMKKQLDAANGKADEATEKLKKVVQAQEDLKKQFDDQKKAGSGSAASAPAAA 122 Query: 131 TGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVA-------VPPPTAFYPGNGVTPP-- 181 + + + + P P Q + + PP G A V PP N +P Sbjct: 123 SSTALDRALLNKPIPLNGQQAKSGAILNPPFGQNARGAAMDVVAPPAKLDIINFDSPKKA 182 Query: 182 ------PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVT 235 P+ + + + Q+ N GK+G + +IP+ +F + ++ G DA Sbjct: 183 GDDCVDPRFSSLPIDQAKQAQQDCLKAN-GKKG--VTFIPATAFVRVFMMNGVDAPTGGE 239 Query: 236 GNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISC-LKDGKT 294 + + L + L +PN++ D TGC + A+GDVSSER ++ ++C LK+G+T Sbjct: 240 AQHDPLHVFLEVLDLANLPNARKLDITGCRILTSAYGDVSSERTMMHGETLACILKNGRT 299 Query: 295 IDMPIKGHVSFR-GKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP--AVGLGA 351 ++M IKG V GK G++G +V ++G L + AG GIGQ +++ LG Sbjct: 300 VEMTIKGTVMGEDGKEGVRGRLVSKSGSALAMSVLAGISSGIGQAFSQSANTLNTTALGT 359 Query: 352 TAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDG 406 T+ V + IG G S+ A +L YYI+ AE+ PVI G V G Sbjct: 360 TSIVNPSQVGRSAIGSGVSQGADSLKQYYIRAAEKLFPVIETDGGRVVEFAVMKG 414 >UniRef50_A1W656 TraB pilus assembly family protein n=6 Tax=Betaproteobacteria RepID=A1W656_ACISJ Length = 472 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 115/211 (54%), Gaps = 5/211 (2%) Query: 218 SFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSE 277 SF + +L+ G DA + P+ +R++ +PN + CFV +GD+SSE Sbjct: 245 SFTRGILLGGLDAPTGGQSQANPHPVLIRLSDNSVLPNQFRGEYRECFVVAAGYGDISSE 304 Query: 278 RAIVRTRNISCLK-DGKTIDMPIKGHVSFR-GKNGIKGEVVMRNGKILGWAWGAGFVDGI 335 RA +RT N+SC++ DG T+++ I+G V GK G++G +V + G++L A AG V GI Sbjct: 305 RAYLRTENLSCVRADGATLEVRIQGSVYGEDGKVGMRGRLVTKQGQMLANALLAGVVSGI 364 Query: 336 GQGMERA--SQPAVGLGATAAYGA-GDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIP 392 GQG+ A + + LG A+ + D + G+G G KA L+ YYIK AE PVI Sbjct: 365 GQGLSTANTTYSSSPLGTMASTDSNADAYRAGLGHGVGKALDRLAQYYIKLAENTFPVIE 424 Query: 393 IGAGNEVTVVFQDGFQLKTVEEMALERTQSR 423 + AG ++ VV G ++ ER Q R Sbjct: 425 VDAGRQIDVVITKGVRIDVPMTAVAERGQRR 455 >UniRef50_Q2LTZ2 Pilus assembly protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ2_SYNAS Length = 397 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 104/354 (29%), Positives = 171/354 (48%), Gaps = 32/354 (9%) Query: 73 EMQVTAAQMQKQ-YEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTAT 131 E+ + A ++K Y E R+E+ ++ Q+ ++++ + E+ KA+ A + Sbjct: 57 EITLDAGLLEKSAYLEGRKEIARTEEKLSLLQKELDEIKE------EKAKAVHAG----S 106 Query: 132 GEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTA--FYPGNGVTPPPQVT---- 185 +P+P +P PP P + +S+P P +A G P + T Sbjct: 107 KQPLPAVP-KPPDP-------SKAISYPVPPLPPPPVSSADPSKVGQASKPAAETTGDIE 158 Query: 186 YQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQL 245 S P + +K + ++G S+ Y+P SF +A L+ G DA + + VP+ L Sbjct: 159 LVSNPQAQKQDQKAAEVKKNEKGDSV-YLPP-SFMEATLLSGLDAPTVESAKGNPVPVLL 216 Query: 246 RITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL--KDGKTIDMPIKGH- 302 RI L +PN D GCFV E G+++ ERA +R N+SCL K ID IKG Sbjct: 217 RIKDLAILPNKVKADLKGCFVIAEGQGNLADERAHLRLVNLSCLSRKGQAVIDQKIKGFV 276 Query: 303 VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPA--VGLGATAAYGAGDV 360 V GK G++G VV + G + + AGF G+G + A+ + LG T G + Sbjct: 277 VDSDGKIGLRGTVVSKMGSAIARSVLAGFFGGVGDALRSATMTSSISALGTTQTVDPGQI 336 Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 + G+G G ++ A L +Y++ A+Q PVI +GA +T+V +G L+ E+ Sbjct: 337 AQAGLGSGLAQGAHELQKFYLELAKQSMPVIEVGATRNITLVVSEGVDLEIKEK 390 >UniRef50_A4JTP2 TraB pilus assembly family protein n=2 Tax=Burkholderiales RepID=A4JTP2_BURVG Length = 405 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 9/222 (4%) Query: 198 KVFTRNEGKQGPS-LPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNS 256 K T+ KQ + Y+ +GS + +L+ G DA S ++ VP +RI +PN+ Sbjct: 184 KAITKVAAKQDTTPAAYLTAGSMFEGILLNGMDAPTSSVAQKNPVPAVMRIKTDAILPNN 243 Query: 257 KTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD-GKTIDMPIKGHVSFR-GKNGIKGE 314 +D CFV + +G +SSERA +RT +SC+ D GK ++ + G+V G+ G +G Sbjct: 244 YNHDVKECFVLVSGYGSLSSERAQLRTETLSCVGDGGKVLETKLDGYVVGEDGRVGARGR 303 Query: 315 VVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAY------GAGDVLKMGIGGG 368 +V + G+++ + AG + G + P + LG+ + Y AG + + G+ G Sbjct: 304 LVSKQGQLIAKSLAAGVLSGFSDALTPQQIPRLDLGSGSGYISTERATAGTIAETGVAKG 363 Query: 369 ASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 S AA++++ +Y+ A++ PV+ I AG ++T+V G +LK Sbjct: 364 FSTAAKSVAAFYLDMAKEMTPVVEIDAGRKLTIVLIKGVELK 405 >UniRef50_A4XE89 TraB pilus assembly family protein n=6 Tax=Sphingomonadaceae RepID=A4XE89_NOVAD Length = 458 Score = 117 bits (294), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 93/292 (31%), Positives = 135/292 (46%), Gaps = 53/292 (18%) Query: 159 PPQGSVAVPP-PTAFYPGNGVTPPPQVTYQS---------------VPVPNRIQRKVFTR 202 P G+ A P P A Y G T PP +YQ+ +P + + + Sbjct: 171 PVMGAGATPVGPNALY---GRTSPP--SYQTAPSTPAGQAAMAAAGLPAGRGSEVSLVSF 225 Query: 203 NEGKQGPSLP-------------YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITG 249 NEG G P Y+P S A A +I G DA A V +P+ LRITG Sbjct: 226 NEGASGTGSPVPKGNTVFTDSANYLPPNSIAVAKVIVGVDAAAGVQSQTDPLPVVLRITG 285 Query: 250 LVEMPNSKTYD--------ATGCFVGLEAWGDVSSERAIVRTRNISCLK-DGKTIDMPIK 300 P YD GC V A GD+SSE+ V+ + ++C + +G+ +K Sbjct: 286 ----PARSVYDNGRLLTTNIAGCLVNGAARGDLSSEKVYVKLQRMTCPQPNGRYAVSDVK 341 Query: 301 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVG------LGATAA 354 G ++F GK G++G VV R G ++G A+ AG G G+G + + G Sbjct: 342 GFIAFGGKTGVRGRVVSREGSLIGQAFLAGLAGGFGRGFAANTNSTLTGTNVNVNGQRQK 401 Query: 355 YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDG 406 G GD+L+ G+G G + + +S Y I+RAEQY PVI + G +V +VF +G Sbjct: 402 LGTGDILEGGLGEGIATSGDMVSKYLIERAEQYQPVIEMPTGIDVEIVFLEG 453 >UniRef50_Q3IUW6 Putative conjugative transfer factor, TraB n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW6_RHOS4 Length = 417 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 77/208 (37%), Positives = 110/208 (52%), Gaps = 12/208 (5%) Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITG-----LVEMPNSKTYDATGCFVG 267 YIP+GS+A A++I G DA+ V ++ VP+ +RITG + + TGC V Sbjct: 212 YIPAGSYAPAVVISGVDASTGVVSRDNPVPVLVRITGPAVTAAAGAGAGRRINLTGCTVL 271 Query: 268 LEAWGDVSSERAIVRTRNISCLKDG-KTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWA 326 A GD+SSER VR ++C+ G K I+ + G V+ GK G++G VV R G + A Sbjct: 272 GSAMGDLSSERVYVRLTTLTCMGRGNKVIETQVAGLVAGSGKAGVRGHVVSREGNLATNA 331 Query: 327 WGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQT----LSDYYIK 382 AG + G + + A+ ++ A G VL G A + L++YYIK Sbjct: 332 AIAGALGGFAKALTSAA--SIASSNDGAETVGSVLGGAGAGVVGGGAASAADRLAEYYIK 389 Query: 383 RAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 RAEQY PV+ + AG V VVF +G LK Sbjct: 390 RAEQYQPVVSLYAGTNVEVVFMEGVSLK 417 >UniRef50_B2I3Y9 TraB pilus assembly family protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Y9_ACIBC Length = 438 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 9/200 (4%) Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGC-FVGLEAW 271 +IP GSF + ++I G DA +P+ + G +MPN+ + GC FVG AW Sbjct: 216 FIPDGSFVRVVMINGVDAPTGGQAQSDPIPVVFQTVGKFDMPNNYKMNIKGCRFVG-AAW 274 Query: 272 GDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFR-GKNGIKGEVVMRNGKILGWAWGAG 330 G++SSER ++ +C+ +G+T+ + IKG V GK GI+G VV + G+IL A A Sbjct: 275 GELSSERVKATIQSGNCIINGQTVPIQIKGQVVGEDGKTGIRGRVVSKQGQILAKAALAS 334 Query: 331 FVDGI----GQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQ 386 ++ I G + ASQ A LG ++ + +GG S A+ LSD+Y++RA Sbjct: 335 AMEAIGGLYGSTVGTASQSA--LGTVRTISGSELKQAAVGGAISGGAEKLSDFYMQRAND 392 Query: 387 YHPVIPIGAGNEVTVVFQDG 406 PVI + AG + +V Q G Sbjct: 393 LFPVIEVSAGRTLEIVVQQG 412 >UniRef50_A1WDF7 TraB pilus assembly family protein n=2 Tax=Burkholderiales RepID=A1WDF7_ACISJ Length = 449 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 3/200 (1%) Query: 210 SLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLE 269 ++ ++P+GSF + ++ G DA + +P+ + + + N D C + Sbjct: 220 TIEFLPAGSFVRVAMLNGVDAPTGGQAQSNPLPVAFHVLDVANLANKHKLDIKDCRIVAA 279 Query: 270 AWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWG 328 WGD+SSER + RT ++C+ +G+ ++M IKG V GK G++G +V + G++L A Sbjct: 280 TWGDLSSERMMGRTETLACVINGEAVEMAIKGQVIGEDGKAGVRGRLVTKQGQLLANALF 339 Query: 329 AGFVDGIGQGMERASQPAV--GLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQ 386 AG + GIG+ + ++ G G T + + IGGG A Q L+ YY+K A++ Sbjct: 340 AGALSGIGKAFQSSATITSTGGGGITQTIDPDKIGQAAIGGGVGSAGQQLAQYYLKAADK 399 Query: 387 YHPVIPIGAGNEVTVVFQDG 406 +PVI G V ++ G Sbjct: 400 LYPVIETDGGRTVEILITKG 419 >UniRef50_D0Z4T3 TraB pilus assembly n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4T3_LISDA Length = 404 Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 98/327 (29%), Positives = 149/327 (45%), Gaps = 24/327 (7%) Query: 17 GIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQV 76 +VV T SA+ YL+ ++ + E EP PD V+ + F K A Q Sbjct: 33 NLVVAATVSAMFAICYLAFKLITAPPQV--EIEPEPDYEPVITSDFTQKDSLSALQAQQQ 90 Query: 77 TAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGE--- 133 T +MQ + R+ D L++Q + +E+L E+ + N + A E Sbjct: 91 TIEKMQTTINGLVRQRDSLSEQI---KSGMEQLDTRFTKAFEEAQRNWLNDMDALQERMN 147 Query: 134 --PVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPV 191 P P +P P G N V+ P G+++ P +YP + + +PV Sbjct: 148 NQPPPIVPDMNEFPSGHSDNPNGRVNPDPFGTLSDQEP--YYPKPYPREYDKPDLKDIPV 205 Query: 192 PNRIQRKVFTRNEGKQGP-------SLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQ 244 R + F+ + + G S Y+P+GSF A+LI ADANA V T P+ Sbjct: 206 SKRQGIQTFSYSWPRAGSQTVYRRSSENYVPTGSFVTAVLIGAADANAGVNAQGDTAPIL 265 Query: 245 LRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL---KDGK--TIDMPI 299 R +PN K GCF +G++SS R I R +N+SC+ + GK ID+P+ Sbjct: 266 FRAIHNGILPNGKRSHLKGCFFTASVYGEISSNRGIARLQNMSCIFEKQKGKEEIIDIPV 325 Query: 300 KGHVSFRGKNGIKGEVVMRNGKILGWA 326 +G G+NG++G VMRNGKI+ A Sbjct: 326 QGTAFNFGRNGMRGTPVMRNGKIMQMA 352 >UniRef50_C1SHE3 TraB pilus assembly protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHE3_9BACT Length = 391 Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 94/329 (28%), Positives = 149/329 (45%), Gaps = 27/329 (8%) Query: 95 LNKQRGDDQRRIEKLGQDNAALA---EQVKALGANPVTATGEPVPQMPASPPGPEGEPQP 151 ++K+ GD +R+E+L A L+ + +A + V A GE Q + G PQ Sbjct: 72 IDKKFGDVLKRVEELENRKADLSFNNQPYQAQEPDKVIAAGETDFQKSVNSGGMR-YPQE 130 Query: 152 GNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPS- 210 N P+ + P T + Y S+ VP ++K K P+ Sbjct: 131 ENNLEFDKPKDKKSRPTETII---------SGIDYISISVPQETEQK-------KSNPAK 174 Query: 211 LPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEA 270 + Y+PS S KA+L+ G A S G + P+ R+T L PN + GC+VG EA Sbjct: 175 VNYVPSNSIFKAVLLTGVYAKTSTQGKSNPTPVIFRLTDLSFFPNEVRRNLAGCYVGGEA 234 Query: 271 WGDVSSERAIVRTRNISCLKDGK--TIDMPIKGHVS-FRGKNGIKGEVVMRNGKILGWAW 327 ++S ER R + SC+ + +D+P+ G V G GI G+V+ + L A Sbjct: 235 HAELSDERVHTRLTSFSCITSDRRQVVDIPVTGRVQGGDGSVGIAGKVISKQEAALLLAG 294 Query: 328 GAGFVDGIGQGMERA-SQPAVGLGATA--AYGAGDVLKMGIGGGASKAAQTLSDYYIKRA 384 +GF++G +G A S V + T+ Y + + IG G K+A L+D++ Sbjct: 295 VSGFIEGGAEGFSAANSTQNVNVFGTSEQTYTDDQIARNAIGKGVGKSAGVLTDFFEDLL 354 Query: 385 EQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 ++ PVI G EV ++ GF L+ E Sbjct: 355 QEIKPVIHAQGGQEVELIISKGFSLEMEE 383 >UniRef50_B4EQI2 Putative TraB conjugative transfer protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EQI2_BURCJ Length = 477 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 67/197 (34%), Positives = 102/197 (51%), Gaps = 3/197 (1%) Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 +P+GSF ++ G DA + + L +PN K+ D GC + AWG Sbjct: 251 LLPAGSFIPVAMLNGVDAPTGGQAQSDPLSVDLEAIKPANLPNGKSLDVRGCRIVSSAWG 310 Query: 273 DVSSERAIVRTRNISCLKDGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGF 331 D+S+ER + RT+ +SC+ G I++ IKG + GK G++G +V + G++L A AG Sbjct: 311 DLSAERMMGRTQILSCIIAGHPIELEIKGKLIGEDGKEGVRGRLVTKQGQVLANAILAGS 370 Query: 332 VDGIGQGMER-ASQPAVGLGATA-AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHP 389 + GIGQ ++ A+ + G G A G V + IGGG A Q L+ YY+K A++ P Sbjct: 371 LGGIGQAFQQSATVTSFGGGGVAQTIDGGQVGRAAIGGGVGTAGQMLAQYYLKAADKLFP 430 Query: 390 VIPIGAGNEVTVVFQDG 406 VI A + V G Sbjct: 431 VIETDATRTIEVSITKG 447 >UniRef50_Q5ZTS2 Putative conjugative transfer protein TraB n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS2_LEGPH Length = 439 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 70/200 (35%), Positives = 105/200 (52%), Gaps = 4/200 (2%) Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 Y+ S +FAKA++++GADA+A V + M +I MPN GC V G Sbjct: 195 YVFSNTFAKAVVLQGADASAGVLSQANPDIMIFQIVDDGVMPNKYRAPLKGCMVSASVIG 254 Query: 273 DVSSERAIVRTRNISCLK-DGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGF 331 D+SSER RT +SC+ +G ID+ + G +S KNGI+G V R+ ++ A+ F Sbjct: 255 DISSERGKFRTERLSCIHSNGTNIDIQVTGIIS-DSKNGIRGRAVWRDEPMVKKAFWGNF 313 Query: 332 VDGIGQ-GMERASQPAVG-LGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHP 389 + +G G + ++ + LG+ + AG + + G S AA+ + Y IKRAE YHP Sbjct: 314 WESMGNIGQQYSTDYSTSPLGSVSTIQAGKIPLAAVSSGGSGAAKMYAQYNIKRAEMYHP 373 Query: 390 VIPIGAGNEVTVVFQDGFQL 409 +I + V V F GF L Sbjct: 374 IIQLPPIVTVDVTFLKGFWL 393 >UniRef50_D0SGY7 TraB pilus assembly family protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY7_ACIJO Length = 440 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 40/302 (13%) Query: 136 PQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQ------VTYQSV 189 P++PA P P NT +F +PP G+ + P T Q + Sbjct: 127 PRLPAQPTNTN---PPSNTSSAF----GANLPPNRQGLHGDSILSDPMGSTVNPATGQVI 179 Query: 190 PVPNRIQ------RKV----FTRNEGKQGPSLP----------YIPSGSFAKAMLIEGAD 229 P+P+ + R+ T N+ +G S+ +IP GSF + +++ G D Sbjct: 180 PLPSNARGNGTAPRQAALIDLTTNDNGRGGSVASTQQAAKKETFIPDGSFVRVVMVTGID 239 Query: 230 ANASVTGNESTVPMQLRITGLVEMPNSKTYDATGC-FVGLEAWGDVSSERAIVRTRNISC 288 A +P+ G ++MPNS + GC F+G AWG +S+ER R + SC Sbjct: 240 APTGGAAQNDPLPVLFETVGKLDMPNSYKMNIKGCRFLGY-AWGSLSTERVNARIESGSC 298 Query: 289 LKDGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAV 347 + +GKT+ + +KG+ + GK GI+G+VV + G+ L A A ++ IG G+ ++ Sbjct: 299 IVNGKTVKINVKGNLIGEDGKPGIRGKVVSKQGQALSAAALASALEAIG-GLYSSTTGTT 357 Query: 348 GLGATAA---YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQ 404 +GA DV +GG S AA+ LSD+Y++RAE+ P++ + AG V ++ Sbjct: 358 TMGALGVQRTVSGEDVRNSAVGGAISGAAEKLSDFYLRRAEELFPIVEVHAGRAVEILIT 417 Query: 405 DG 406 G Sbjct: 418 KG 419 >UniRef50_Q6MBA0 Putative F pilus assembly protein traB n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBA0_PARUW Length = 408 Score = 108 bits (270), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 65/198 (32%), Positives = 101/198 (51%), Gaps = 5/198 (2%) Query: 215 PSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDV 274 P+ +A+L+ DA + +P++LR+ +P GC +G A+GD+ Sbjct: 193 PANVSVRAILLSSVDAVCRLDAQSDPIPVKLRLLDDAHLPGGMKVKLKGCLIGASAYGDI 252 Query: 275 SSERAIVRTRNISCLK-DGKTIDMPIKGHVSFR-GKNGIKGEVVMRNGKILGWAWGAGFV 332 SSER +R N++ + G+ I+ + G+VS G+ G++G +V R+ KIL A G+G + Sbjct: 253 SSERVYMRLENLTQVNLSGQAIETEVTGYVSGEDGRFGMRGILVDRSAKILKPALGSGIL 312 Query: 333 DGIGQGMERA-SQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVI 391 GI Q ++ A ++P+ T Y S A L+ YYIKRAEQ PV+ Sbjct: 313 SGIAQTLQSACARPSKETINT--YSLSSDFAQNTVAKTSDAFSLLASYYIKRAEQVQPVL 370 Query: 392 PIGAGNEVTVVFQDGFQL 409 I AG V V F GF + Sbjct: 371 QIDAGRLVDVTFTQGFSM 388 >UniRef50_C4NUW9 TraB n=11 Tax=Gammaproteobacteria RepID=C4NUW9_ECOLX Length = 438 Score = 107 bits (268), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 98/359 (27%), Positives = 159/359 (44%), Gaps = 34/359 (9%) Query: 79 AQMQKQYEEIRRELDVLNKQRGDD----------QRRIEKLGQDNAALAEQVKALGANPV 128 + ++K+ E +++EL+ G ++ +++L Q N LA++V+ A Sbjct: 78 SDLKKELERVKKELEETKTTAGKSSDVGREMTRLRQDLDRLTQKNMELAKKVETGAAGGK 137 Query: 129 TATGEPVPQMPAS-PPGPEGEPQPGNT----PVSF----PPQGSVAVPPPTAFYPGNGVT 179 T++ + + G +G+ P SF P S P T G T Sbjct: 138 TSSSSEDARADVNGASGGDGQFMEKKLDYKDPASFFRDAPLPDSKGGAPATGKGDGRDAT 197 Query: 180 PP-PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNE 238 P Q+ S P + K S+ Y+PSGS +LI G DA S Sbjct: 198 KPGIQIVSYSQKAPE------VEEKDNKDDESI-YLPSGSILTGVLINGMDAPTSQGARR 250 Query: 239 STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK-DGKTIDM 297 P LRI +PN D CF+ + +GD+SSERA +R SC++ DG I+ Sbjct: 251 DPFPSTLRIQKEAILPNRFRADVRECFLIVSGYGDLSSERAYLRGETFSCVRDDGGVIEA 310 Query: 298 PIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGL--GATAA 354 + + V GK G++G VV + G+I+ + AGF+ G+ + + P V G+ Sbjct: 311 KLDSYAVGEDGKAGVRGRVVSKQGQIIAKSLMAGFLGGVSEAFDVNPVPVVSTNPGSNTQ 370 Query: 355 YG---AGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 Y + +L+ GASKA ++ +YI AE PVI + AG +V ++ G +L+ Sbjct: 371 YQSVFSDQMLQGAAVKGASKALDRIAQFYIDMAEGIFPVIEVDAGRQVDIIVTKGTKLQ 429 >UniRef50_Q1MY41 TraB pilus assembly n=1 Tax=Bermanella marisrubri RepID=Q1MY41_9GAMM Length = 415 Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 4/186 (2%) Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 Y+P+G+FAK +++ G DA + +P+ L++ +PN D C V A G Sbjct: 204 YMPAGAFAKVLVLSGVDAPTGGMAESNPLPVILKVLDSAILPNFFDSDIRNCHVVGAATG 263 Query: 273 DVSSERAIVRTRNISC-LKDGKTIDMPIKGHVSFR-GKNGIKGEVVMRNGKILGWAWGAG 330 D+++ER ++RT +SC L +G I++PIKG+++ GKNG +G VV + G +L + AG Sbjct: 264 DLAAERVMIRTEVLSCVLANGDIIEVPIKGYIAGEDGKNGFRGRVVSKQGAVLAKSLFAG 323 Query: 331 FVDGIGQGMERASQ--PAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYH 388 G+ + Q LG + V + G GA+ + ++D+Y KRA + + Sbjct: 324 VASGLSNSINSQYQQIQTSALGTVTSIDPDKVAESGAAQGATTTLEKIADFYFKRANEIY 383 Query: 389 PVIPIG 394 P+I + Sbjct: 384 PIIEMA 389 >UniRef50_D2U001 Conjugal transfer pilus assembly protein TraB (Fragment) n=1 Tax=Arsenophonus nasoniae RepID=D2U001_9ENTR Length = 230 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 76/248 (30%), Positives = 118/248 (47%), Gaps = 48/248 (19%) Query: 34 SDVDMSGNGETVAEQEPV---PDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRR 90 S V+++ TV P PD+TG + TFD+KV+ + T+ Q++ + R+ Sbjct: 25 SGVELTAADSTVQSGNPSAQEPDLTGAITNTFDNKVQGNVVTDAQLSE-------KANRQ 77 Query: 91 ELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGE-- 148 +DVL K+ +R + + +N+ L V L A ++ + EGE Sbjct: 78 TMDVLLKEIQGIKRDFDAVKNENSQLKANVGQLQA-----------EIQHNKKAMEGENS 126 Query: 149 PQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQG 208 P PG + VS PPQ ++ +P ++ FT + + Sbjct: 127 PTPGASQVSHPPQIAI------------------------LPAKGQLGSTRFTYPKKENM 162 Query: 209 PSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMP-NSKTYDATGCFVG 267 PS Y+PSG+F+ A+++EGADANASV G V MQ ++TGL +P N K T CFV Sbjct: 163 PSGFYVPSGTFSTAIVLEGADANASVKGETKKVAMQFKLTGLAHLPGNQKLNKLTNCFVT 222 Query: 268 LEAWGDVS 275 AWG++S Sbjct: 223 ASAWGEIS 230 >UniRef50_B7XGQ7 Putative pilus assembly protein n=2 Tax=Pseudomonas RepID=B7XGQ7_PSEPU Length = 438 Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 63/211 (29%), Positives = 102/211 (48%), Gaps = 15/211 (7%) Query: 214 IPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGD 273 +P+GS ++L+ G DA P +RI +PN D CF+ WGD Sbjct: 216 LPAGSILSSVLVTGMDAPTGKQAQRDPFPSLVRIKNEAILPNRFRADFRECFMIASGWGD 275 Query: 274 VSSERAIVRTRNISCLK-DGKTIDMPIKGHVSFR-GKNGIKGEVVMRNGKILGWAWGAGF 331 +SSERA +R +SC++ DG ++ I+ + + GK G++G +V + G+I+ + GAGF Sbjct: 276 LSSERAYMRAERLSCVRNDGSVLEASIEAYATGEDGKAGLRGRLVSKQGQIIARSLGAGF 335 Query: 332 VDGIGQGMERASQPAVGL------GATA------AYGAGDVLKMGIGGGASKAAQTLSDY 379 + GI P + + G T A+ + + G G S A + ++D+ Sbjct: 336 LQGIAGAFNVQKVPTINVTRASDDGKTVAPVYEQAFDSNALQSAGFSGAGS-ALERIADF 394 Query: 380 YIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 Y++ AE PVI I A EV + G +K Sbjct: 395 YLEMAESIFPVIEIDAMREVDFIVNKGMTVK 425 >UniRef50_Q5WSC0 Putative uncharacterized protein n=2 Tax=Legionella RepID=Q5WSC0_LEGPA Length = 484 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 9/202 (4%) Query: 213 YIPSGSFAKAMLIEGADANASVTG--NESTVPMQLRITGLVEMPNSKTYDATGCFVGLEA 270 Y+ +G+ A+ +L+ GA +A + G N T ++L G+ MPN++ GC + Sbjct: 200 YVWAGTHAEGILLSGAKGDAGINGAKNMGTALIRLDSNGI--MPNNRHSRLNGCLAIVST 257 Query: 271 WGDVSSERAIVRTRNISCLKDGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGA 329 +GD+S + ++ +SC K + + + G V ++G +++ +L ++ A Sbjct: 258 YGDLSDDAVVMHLETLSCAKPNLSFEQKVYGAVYDLDAMQDLRGTSILKTKPLLEYSAAA 317 Query: 330 GFVDGIGQGMERASQPAV---GLGATAAYG-AGDVLKMGIGGGASKAAQTLSDYYIKRAE 385 G + G G G++ + G G YG A +++ GG S A +SDY +K A+ Sbjct: 318 GILAGFGDGLKNLNTAQTINPGAGTITTYGQASTLMQSAAGGAVSNPANKISDYIMKIAD 377 Query: 386 QYHPVIPIGAGNEVTVVFQDGF 407 YHP++ AG V+++F GF Sbjct: 378 IYHPLVVARAGRRVSIMFTKGF 399 >UniRef50_C3NU45 IncF plasmid conjugative transfer pilus assembly protein TraB n=16 Tax=Gammaproteobacteria RepID=C3NU45_VIBCJ Length = 430 Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 8/205 (3%) Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 Y+P+GS LI G DA + P LRI +PN D CF+ +G Sbjct: 214 YLPAGSIISGTLITGLDAPTHESARREPFPALLRIQKEAILPNRFRADIKECFLIAAGYG 273 Query: 273 DVSSERAIVRTRNISCLK-DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAG 330 D+SSERA +R ISC++ DG I+ + + V GK GI+G +V + G+++ + AG Sbjct: 274 DLSSERAYLRGETISCVREDGGVIETRLDSYAVGEDGKAGIRGRLVSKQGQLVAKSMMAG 333 Query: 331 FVDGIGQGMERASQPAV---GLGATAAYG---AGDVLKMGIGGGASKAAQTLSDYYIKRA 384 F+ G+ + P + G T Y + + L+ G KA ++ +Y+ A Sbjct: 334 FLQGLAGAFDVNPVPTIQTGNAGDTQLYQQVMSQEALQGAAIKGTGKALDRVAKFYLDMA 393 Query: 385 EQYHPVIPIGAGNEVTVVFQDGFQL 409 E PVI + A ++ V+ G L Sbjct: 394 ENMFPVIEVDAARKIEVIVTRGASL 418 >UniRef50_C4Z000 Putative TraB pilus assembly n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4Z000_9RICK Length = 428 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 95/420 (22%), Positives = 187/420 (44%), Gaps = 61/420 (14%) Query: 3 SINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTF 62 S++T + ++ WL I ++ I G L ++ SG+ + +E + D+ + T++ Sbjct: 30 SVSTYRRAQERRWLYICLI-----IFGVLGVAMKLQSGSSSKIKHEEKIKDVGRNIGTSY 84 Query: 63 D----DKVRQ-HATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALA 117 D +K+ Q H +++ + ++Q++ E+ V++ R ++ + + Q+ +A Sbjct: 85 DAMDGNKIWQNHFEDKLRNSQHELQEKVEK------VIHDMRAKEEEQRKHRDQEMQKMA 138 Query: 118 EQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNG 177 EQ+K + + + + ++ + E + A G Sbjct: 139 EQLK-FAQDELRSAALELKRVSDIAESNKYEQE--------------------AIIRGGE 177 Query: 178 VTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASV-TG 236 V+ S+ + + +Q K YIP SF + G + + T Sbjct: 178 VS--------SIKIGSNVQW-------DKPKDIRDYIPETSFVSGYTLGGIVTSTGINTA 222 Query: 237 NESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTID 296 +E+ P+ +R++ +P + D + C V ++GD+SSER I+R + C+ D KT Sbjct: 223 SENATPVVIRLSNRGNLPKNINVDISKCRVQGSSYGDLSSERVIIRAEKLICI-DPKTEL 281 Query: 297 MPIKGHVSF----RGKNGIKGEVVMRNGKILGWAWGAGFVDGIG---QGMERASQPAVGL 349 + + G NGIKG+V+ + K + A+ + G+ +G+E + ++G Sbjct: 282 VTTSDVIGVVHGDDGMNGIKGKVIATSSKHIKNAFIGSMLSGLASSSKGIEGLTLTSLGA 341 Query: 350 GATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 T G DV G+ G S A + ++DYY++ AEQ PV+ + G +V V+F GF L Sbjct: 342 VNTKRQGFKDVAGQGLLNGGSNAGEKIADYYLRLAEQMSPVLTVPGGVKVDVIFTKGFFL 401 >UniRef50_Q8L277 Pilus biogenesis protein n=4 Tax=Bacteria RepID=Q8L277_PROVU Length = 452 Score = 91.7 bits (226), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 114/452 (25%), Positives = 180/452 (39%), Gaps = 69/452 (15%) Query: 5 NTIVKRKQY-LWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPV-------PDMTG 56 N K+K+Y LW G+ +V L L + + + + A +E V D TG Sbjct: 13 NLDAKKKRYALWAGLAIVIIP------LLLVIMPENSSPRSKATKEKVIQNVLTDSDTTG 66 Query: 57 VVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELD--VLNKQRGDDQRRIEKLGQDNA 114 V ++R + T + + + + LD LNK+ + IE + ++ A Sbjct: 67 VSQNAIAARLR-----SLDETIKSTKTAVDTLNKTLDPDALNKRLTN----IENVQKNEA 117 Query: 115 A----LAEQVKALGANP-VTATGEPV--------PQMPASPPGPEGEPQPGNTPVSFPPQ 161 A L ++ L NP ++TG + PQ S E +PQ S Q Sbjct: 118 AARQTLNNRIDTLIKNPPASSTGGALNPKNVFAAPQDGQSGEAAENQPQNARATASGTLQ 177 Query: 162 G---SVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQ--GPSLPYIPS 216 + P P+ F + SVP +Q+ + ++ + GP Y+P+ Sbjct: 178 SVYENDIAPDPSDFDHSADASKSKNEAPASVPNIVTVQQDIKEEHDSDEDTGPE-TYLPA 236 Query: 217 GSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSS 276 S + I G DA + P +RI +PN D C + +GD+SS Sbjct: 237 TSIISGVFISGMDAPTAQNARNDPYPALIRIKKDAILPNRFRVDIRECGMLAAGFGDLSS 296 Query: 277 ERAIVRTRNISCLK-DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDG 334 ERA R+ I+C++ DG + I + V GK G++G +V + G+ L A AGF+ Sbjct: 297 ERAYFRSEVITCIREDGAVFEASIDAYAVGEDGKAGVRGRLVTKQGQYLAKALTAGFLQA 356 Query: 335 IGQGMERASQPAVG----------------LGATAAYGAGDVLKMGIGGGASKAAQTLSD 378 Q S P + + + A GA G+GG ++ L+D Sbjct: 357 ASQLFSVQSIPTINVNRDGNSRGGSPYEQVMSSQAMQGAA---ISGVGGALNR----LAD 409 Query: 379 YYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 +Y+K A PVI I V V Q G LK Sbjct: 410 FYMKMATDLFPVIEIDPARSVDFVVQKGVSLK 441 >UniRef50_B3EB62 TraB pilus assembly family protein n=3 Tax=Proteobacteria RepID=B3EB62_GEOLS Length = 422 Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 67/202 (33%), Positives = 104/202 (51%), Gaps = 6/202 (2%) Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 Y+P SF +A L+ G DA + + VP+ LR+ +PNS + GCFV + G Sbjct: 211 YLPP-SFMEATLLSGLDAPTTSEAKGNPVPVLLRVKTPAVLPNSVKANLKGCFVIADGKG 269 Query: 273 DVSSERAIVRTRNISCL--KDGKTIDMPIKGHVSFR-GKNGIKGEVVMRNGKILGWAWGA 329 ++++ERA + ++SCL K +D IKG V GK G++G VV + G ++ + A Sbjct: 270 NLATERAELLLVSLSCLDRKGQAVVDQKIKGFVVDEDGKIGLRGRVVAKMGSMIARSMLA 329 Query: 330 GFVDGIGQGMERA--SQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQY 387 GF G G ++ A + LG T D+ G+G G S + + +Y++ A Q Sbjct: 330 GFFGGAGDAIKSAATTMSVSPLGTTQTVDPKDIAMSGLGSGLSSGFKEIQKFYMELARQT 389 Query: 388 HPVIPIGAGNEVTVVFQDGFQL 409 PVI +GA VT+V +G L Sbjct: 390 MPVIEVGATKPVTLVISEGINL 411 >UniRef50_C1MEJ9 Pilus biogenesis protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MEJ9_9ENTR Length = 465 Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 11/209 (5%) Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 Y+P+ S +LI G DA S + P R+ +PN D C + +G Sbjct: 242 YLPATSIISTVLIAGMDAPTSRDARKDPYPALARVKKDAILPNRFRADIRECGMLAAGFG 301 Query: 273 DVSSERAIVRTRNISCLK-DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAG 330 D+SSERA R+ I+C++ DG + P+ + V GK+G++G +V + G+ L A AG Sbjct: 302 DLSSERAYFRSEVITCIRDDGAVFEAPLVAYAVGEDGKSGVRGRLVTKQGQYLARALTAG 361 Query: 331 FVDGIGQGMERASQPAVGL------GATAAYG---AGDVLKMGIGGGASKAAQTLSDYYI 381 F+ Q S P + + + Y + D L+ G A L+D+Y+ Sbjct: 362 FLQAASQLFNVQSIPTISIKRDGDSSDSTPYQQVMSSDALQGAAVSGVGGALNRLADFYM 421 Query: 382 KRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 + A PVI I G V + Q G LK Sbjct: 422 QMAGDLFPVIEIDPGRSVDFIVQKGVMLK 450 >UniRef50_C0QUX1 TraB pilus assembly family protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QUX1_PERMH Length = 416 Score = 89.4 bits (220), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 14/220 (6%) Query: 214 IPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGD 273 +P G F K + + G DA G + P+ + + N+K + CF +G+ Sbjct: 205 LPLG-FLKGLTLTGLDAPTFQYGQNNPHPVLIVSLSKQIIANNKKLNLKECFFLGSGFGE 263 Query: 274 VSSERAIVRTRNISCL-KDGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGF 331 +SSERA +R +SC+ K G ++ + G V GK G++G VV + G +L + AG Sbjct: 264 ISSERAYIRLVKLSCIDKKGNVLEQKVAGWVLDDDGKVGLRGRVVSKQGAVLAKTFMAGL 323 Query: 332 VDGIGQGMERASQPA--VGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHP 389 ++G+ + + S +G T D K+ + G AA L+ +Y+K AEQ +P Sbjct: 324 LEGLSRTIAATSTTIQISPVGTTQTLNPQDATKVALASGFQSAASRLAQFYMKIAEQMYP 383 Query: 390 VIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAEEDNP 429 V+ + G ++T++ G +LE+T+ NP Sbjct: 384 VVEVSPGRKITILISGG---------SLEKTKDNKLISNP 414 >UniRef50_C4K0M3 F pilus assembly protein TraB n=13 Tax=Rickettsieae RepID=C4K0M3_RICPU Length = 472 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 69/215 (32%), Positives = 100/215 (46%), Gaps = 14/215 (6%) Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDAT----GCFVGL 268 YI +GSFA+ +L+ G S P+ +R+ SK Y +G Sbjct: 192 YITTGSFARGLLLTGVVVGTGTNNAASPEPIMIRLVDTAIF--SKGYKTEQIKEAILIG- 248 Query: 269 EAWGDVSSERAIVRTRNISCLKD-GKTIDMPIKG-HVSFRGKNGIKGEVVMRNGKILGWA 326 GD+SSERA R +S L GK I+ ++G + G+ GIKG VV R+ + A Sbjct: 249 SCTGDISSERAKCRLETVSLLNSHGKIIEKSVEGWLIGEDGRPGIKGIVVDRSSDVARMA 308 Query: 327 WGAGFVDGIGQGMERASQPAVG-----LGATAAYGAGDVLKMGIGGGASKAAQTLSDYYI 381 G + GI Q + + ++ G A D LK G+ G A L+D+ I Sbjct: 309 VLNGVLGGIAQFFQNQATNSIFPVSPITGQQNALKVQDSLKAGVYAGTGNALAKLADFAI 368 Query: 382 KRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMA 416 KRAE PVI + +G + VVF+ GF L+ +E A Sbjct: 369 KRAESMSPVIVVASGRVIDVVFRKGFDLREDKEAA 403 >UniRef50_A0R7R0 TraB pilus assembly family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7R0_PELPD Length = 468 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 6/209 (2%) Query: 206 KQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCF 265 K+ + Y+P S+ +A L+ GA + + + +P+ LR+ +PN GC+ Sbjct: 249 KKATTTVYLPP-SYMEATLLSGAYIPTTESAKGNPMPVLLRVKTPAFLPNEAKAAVKGCY 307 Query: 266 VGLEAWGDVSSERAIVRTRNISCL-KDGK-TIDMPIKGH-VSFRGKNGIKGEVVMRNGKI 322 + + ++++ERA + ++SCL K G+ ID +KG + G GI G+VV + G + Sbjct: 308 IIADGKANLATERAEMTIVSMSCLDKKGRAVIDQKVKGWLIDSDGVAGIGGKVVAKMGTM 367 Query: 323 LGWAWGAGFVDGIGQGMERA--SQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYY 380 + + AGF GIG ++ A + LG T + D G+GGG S + + +Y Sbjct: 368 VARSLIAGFAGGIGDALKAAATTTSVSALGTTQSIDPKDAAMAGVGGGLSNGFKEIQKFY 427 Query: 381 IKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 + A+Q P + I VTV +G L Sbjct: 428 LDLAKQTMPTVAILPSKTVTVAISEGVVL 456 >UniRef50_D2U0R2 Conjugative transfer pilus assembly protein TraB n=1 Tax=Arsenophonus nasoniae RepID=D2U0R2_9ENTR Length = 434 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 57/211 (27%), Positives = 98/211 (46%), Gaps = 18/211 (8%) Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 Y+P+ S + + G DA + E+ PM LR+ +PN+ + D C + +G Sbjct: 222 YLPASSIIPTVALSGMDAPTAKQARENPYPMLLRVKKDAILPNNFSADIKECGILAVGYG 281 Query: 273 DVSSERAIVRTRNISCLK-DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAG 330 ++SSERA +R+ I+C++ DG + V GK GI+G +V + G+ L A AG Sbjct: 282 ELSSERAYLRSNTITCIRDDGAVFEAAFDSFAVGEDGKAGIRGRLVTKQGQYLAKALIAG 341 Query: 331 FVDGIGQGMERASQPAVGLG------ATAAYGAGDVLKM------GIGGGASKAAQTLSD 378 F+ + P + LG + Y + K+ G+GG ++ L+D Sbjct: 342 FLQAGAEMFSVQQLPTITLGRVGDDKVNSPYQQINSNKLQGAAMKGVGGALNR----LAD 397 Query: 379 YYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 +Y+ A+ PVI I + ++ G +L Sbjct: 398 FYMDMAQDLFPVIEIDPARSIDLIVTKGVKL 428 >UniRef50_A9AU14 Putative uncharacterized protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AU14_BURM1 Length = 453 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 59/179 (32%), Positives = 88/179 (49%), Gaps = 10/179 (5%) Query: 242 PMQLRITGLVEMPNS-KTYDATGCFVGLEAWGDVSSERAIVRTRNISC-LKDGKTIDMPI 299 P R+ G MPNS K+ D CF+G A +S+ERA V + ISC K+G+ + I Sbjct: 266 PFVSRVKGATIMPNSWKSSDLENCFIGGSATAVLSAERAYVISDKISCVFKNGEIYEGDI 325 Query: 300 KGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME----RASQPAVGLGATAA 354 + + G G+ G+VV + G +L A G G+G + + V G+T A Sbjct: 326 VAYGLDVDGNLGLAGKVVNKQGSMLMQAALTGMAAGLGSALAPTAVSSYNSNVSAGSTGA 385 Query: 355 Y---GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 Y +L +G G +KAA LS +Y+ A++ PVI + AG VT + + LK Sbjct: 386 YTYPSPSFLLGTSVGTGVNKAATELSQFYLNFAKETFPVIEVTAGTRVTWILKQALTLK 444 >UniRef50_Q19NS7 ThrB n=10 Tax=Enterobacteriaceae RepID=Q19NS7_ECOK1 Length = 455 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 8/207 (3%) Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 ++P+ S +LI G +A S++ +P+ +RI V MPN+ T D C + A G Sbjct: 244 FLPATSIITGVLITGLEAPTSLSSKSEPMPVTMRIKKDVIMPNNFTMDLRDCNLLGSAVG 303 Query: 273 DVSSERAIVRTRNISCLKD-GKTIDMPIKGHVSFR--GKNGIKGEVVMRNGKILGWAWGA 329 D++S+RA +R +ISC+ GK D+ ++ + GKNGI+G ++ RNG + A A Sbjct: 304 DLASQRAYIRATSISCVNSKGKAFDVKLEAYAVSENDGKNGIRGTLISRNGNAIAGAAFA 363 Query: 330 GFVDGIGQGM--ERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQT---LSDYYIKRA 384 G + + + + S + + A Y + + +G GA A L DYY A Sbjct: 364 GGLSSLAGSLSPSKVSSLNIDPNSQAQYQSPNFGALGALAGAGAAQGGLNRLVDYYTAIA 423 Query: 385 EQYHPVIPIGAGNEVTVVFQDGFQLKT 411 EQ P++ I G +T V Q G + T Sbjct: 424 EQQWPIVEISPGRAITFVVQTGTTIPT 450 >UniRef50_A0L342 TraB pilus assembly family protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L342_SHESA Length = 452 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 95/413 (23%), Positives = 172/413 (41%), Gaps = 79/413 (19%) Query: 41 NGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQM-----QKQYEEIRRELDVL 95 +G+ +A ++ + + +D + ++ + QV QM QK+ E I ++ +L Sbjct: 73 SGQLIAMRKKIQEREKAIDAQYTEQKASEKRIQQQVDTLQMSQLESQKRLETIAHQMQML 132 Query: 96 NKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTP 155 +E+ ++ A + V A GA P E + Q S P E P + Sbjct: 133 ----------VEQQSKNAATARDSVSAKGARP-----ENIAQQAPSLPSTEFSLDPMASL 177 Query: 156 VSFPPQGSVAVPPPTA---------------------FYPGNGVTPPPQVTYQSVPVPNR 194 S +VA+ PP + GN T QV ++ Sbjct: 178 KS-----NVAMTPPASKTLTMNRGDVSLGKAAATGDEANVGNASTAKNQVAAKA------ 226 Query: 195 IQRKVFTRNEG--KQGPSLP--YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGL 250 ++ + N G K+ P ++ +G+ +L+ G S + + P+ L+I + Sbjct: 227 -KQAISQENTGSIKKTEKEPETWLSAGTVIPTVLLTGQHVPTSSSAQSNPAPVLLKIVDV 285 Query: 251 VEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIKGHVSFR-GK 308 MPN T D GC V A G S+ R +R +ISC+ + G+ I+ P V + G Sbjct: 286 GVMPNGFTIDLVGCTVIGAARGSASTRRVEIRAESISCIDQRGRAIEQPFIAAVQGQDGH 345 Query: 309 NGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMG---- 364 +GI ++V G+++ ++ AG Q + +A+ V +GDV+ G Sbjct: 346 SGIPAKLVTLYGEVVKQSFWAGIYGTGAQTLTQAATNRV---------SGDVVYDGTYFK 396 Query: 365 ------IGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNE-VTVVFQDGFQLK 410 + GG+S A ++D+Y++ A++ P + + G E V ++ Q G LK Sbjct: 397 NTATSSLAGGSSTAFDKIADFYLQLADEARPYLEMHGGIEGVDLIVQRGVSLK 449 >UniRef50_B7J829 Conjugal transfer protein, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J829_ACIF2 Length = 543 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 92/399 (23%), Positives = 161/399 (40%), Gaps = 57/399 (14%) Query: 71 TTEMQVTAAQM-QKQYEEIRR--ELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANP 127 +++M+ QM Q+ +EI+ + L Q Q++I L Q+ L + + N Sbjct: 104 SSQMKDLKGQMSQEVLKEIQENEKKHALQLQNPATQKQIAALTQEIKTLKAEKQQPVYNQ 163 Query: 128 VTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPP------ 181 V P P MP + P P+ +G VA P T NG+ PP Sbjct: 164 VAPGVAPAPSMPVNTWSPA-------QPIEILGEGGVASSPST-----NGIAPPTAPAIP 211 Query: 182 ------------------PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAM 223 P V+Y ++ V N+ K G Y+P+ + + Sbjct: 212 GTPGAHGVPTAPAIAGRRPTVSYHQPKTLKQLGGTVKVSNK-KTGI---YLPASTILTGV 267 Query: 224 LIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRT 283 LI G A + + +RI +PN + C V +G ++ R +RT Sbjct: 268 LINGVIAGTGPDSKHNPQIVDIRIKKKAILPNGLRINLENCEVLASGYGSMNERRVFMRT 327 Query: 284 RNISCL--KDGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME 340 +SC+ + G I PI + VS G G+ G+V+ G + ++ +G G+G ++ Sbjct: 328 DTLSCVNRRTGNVISAPIHAYVVSSGGHGGVPGKVISHQGPAMLKSFLSGIFSGLGNAIQ 387 Query: 341 RASQPAVGL----GATAAYGAGDVLKMG---IGGGASKAAQTLSDYYIKRAEQYHPVIPI 393 ++ L G+ +Y + MG + GG S A +S +Y+ AE P I + Sbjct: 388 PNQVDSLSLNPQSGSAQSYQMPSLGYMGGSALAGGISTPAGEISKFYLHEAESELPTIEV 447 Query: 394 GAGNEVTVVFQDGFQL----KTVEEMALERTQSRAEEDN 428 G V+++ + G ++ +T ++A + QS + N Sbjct: 448 NPGVSVSMIIETGVRVHVHGETKGQLAEAQYQSASSISN 486 >UniRef50_B0RL09 TraB pilus assembly family protein n=2 Tax=Yersinia RepID=B0RL09_YEREN Length = 416 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 99/400 (24%), Positives = 166/400 (41%), Gaps = 66/400 (16%) Query: 39 SGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQ--VTAAQMQKQYEEIRRELDVLN 96 SG ETV +P+P + V DT D ++ ++Q + + + + ++ D++N Sbjct: 54 SGKAETV--NKPIPKTSVVADTAEDKLLKDDVVAQLQGDIKDSNAKITDDVAKKIQDMIN 111 Query: 97 KQRGDDQRRIE-----KLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQP 151 K + ++ L + N + ++ LG + TG PV S P P E P Sbjct: 112 K----GEFKLAPTPPVNLAEANISPVKENNELG----STTGNPVE---FSYPQPLSESSP 160 Query: 152 GNTPVSFPPQGSVAVPPPTA--FYPGN-------GVTPPPQVTYQSVPVPNRIQRKVFTR 202 ++ S P G+ PP A + G+ PP +V + N+IQ Sbjct: 161 VSSDNSTPVDGTT---PPDAGPIWLGDIAIDNSAFTQPPAEVNTEK---KNQIQ------ 208 Query: 203 NEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDAT 262 +P G F KA L+ G +A G E+ + R+ ++PN + + Sbjct: 209 -----------LPVG-FMKAHLLVGVNALTGEFGAENPQTVMFRVQAPAQLPNFIKMNLS 256 Query: 263 GCFVGLEAWGDVSSERAIVRTRNISCLKDGK--TIDMPIKGHVSFR-GKNGIKGEVVMRN 319 GCF G++S ER I ++ C+ K ++ IKG VS R GK + VV R Sbjct: 257 GCFSVANVTGNLSMERIIALPISMHCITRDKRFIVEGSIKGFVSDRDGKRDMSARVVSRA 316 Query: 320 GKILGWAWGAGFVDGIGQ--GMERASQPAVGLGATAAYGAGDVLKM----GIGGGASKAA 373 G +L A ++G G + +Q LG+ D+ K G+ GG S+ Sbjct: 317 GPLLASTIFAKSIEGFANVVGSQGVTQNVSALGSVNTIKNEDLAKTAATQGLAGGLSEVG 376 Query: 374 QTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 + Y + A+Q P + G+G +V + Q+ L+ E Sbjct: 377 K----YLLDLAKQTAPALETGSGKDVMLFIQETATLEIKE 412 >UniRef50_B3CUL3 Putative conjugative transfer protein TraB n=1 Tax=Orientia tsutsugamushi str. Ikeda RepID=B3CUL3_ORITI Length = 368 Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 9/113 (7%) Query: 307 GKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERAS-----QPAVGLGA----TAAYGA 357 G++GIKG VV ++ I G A G I + ++ + P + L A + Sbjct: 10 GRSGIKGIVVDKSSNIAGMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAGGQQQQEFQI 69 Query: 358 GDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 GD + G GAS A L+D+ IKRA+ P+I + +G + VVF+ GF L+ Sbjct: 70 GDAFQSGAYAGASNAFDKLADFAIKRADSMSPLIVVASGRVIDVVFKKGFDLR 122 >UniRef50_A5CDW0 Conjugative pilus assembly protein n=23 Tax=Orientia tsutsugamushi RepID=A5CDW0_ORITB Length = 156 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 24/52 (46%), Positives = 32/52 (61%) Query: 358 GDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 GD L+ G GAS A L+D+ IKRA+ PVI + +G + VVF+ GF L Sbjct: 73 GDALQSGAYSGASNAFDKLADFAIKRADSMSPVIVVASGRVIDVVFKKGFDL 124 >UniRef50_C4YZI3 F pilus assembly protein TraB n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4YZI3_9RICK Length = 235 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 14/102 (13%) Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL-KTVEEMAL-- 417 LK G+ G A + L+D+ IKRAE PVI +G+G V VVF+ GF L + EE L Sbjct: 102 LKAGVYSGTGNALEKLADFAIKRAESMSPVIVVGSGRVVDVVFRKGFDLIDSGEEQQLIA 161 Query: 418 ------ERTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLK 453 ++ R ++N PS + +N F + K Sbjct: 162 YGGNFTQQENYRNHQNNNH-----YPSGSNRINSFGNNNFSK 198 >UniRef50_D2W236 FH2 domain-containing protein n=2 Tax=Naegleria gruberi RepID=D2W236_NAEGR Length = 2131 Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats. Identities = 42/127 (33%), Positives = 54/127 (42%), Gaps = 21/127 (16%) Query: 81 MQKQYEEIRRELDVLNKQRGDDQRRIEKLGQ-------DNAALAEQVKAL-----GANPV 128 +QKQ + I ++ L Q + RIE L + A+ QV L G+N Sbjct: 419 LQKQVDTITKDNAQLKDQMEKLKVRIEALEKAPPTVIVKKVAVVRQVGELKSSGSGSNLA 478 Query: 129 TATGEPVPQMPASPPG--PEGEPQPGNTPVSFPPQGSVAVPPPTAFYPG-NGVTPPPQVT 185 P SPP P+ N+ V PPQ S VPPP PG GV PPP + Sbjct: 479 GLVESNSPT--TSPPNIFPDDTVPSCNSSVPPPPQASSVVPPP----PGMGGVVPPPPIG 532 Query: 186 YQSVPVP 192 SVP+P Sbjct: 533 SSSVPLP 539 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P41067 Protein traB n=45 Tax=root RepID=TRAB1_ECOLI 601 e-170 UniRef50_B3WTP8 Protein TraB n=4 Tax=Enterobacteriaceae RepID=B3... 384 e-105 UniRef50_B6ICF4 TraB protein n=1 Tax=Escherichia coli SE11 RepID... 363 6e-99 UniRef50_B2VB09 TraB protein n=1 Tax=Erwinia tasmaniensis RepID=... 354 3e-96 UniRef50_A4WGS4 TraB pilus assembly family protein n=4 Tax=Enter... 354 4e-96 UniRef50_A9L6K3 TraB pilus assembly family protein n=8 Tax=Gamma... 351 3e-95 UniRef50_D0Z576 IncF plasmid conjugative transfer pilus assembly... 336 9e-91 UniRef50_C9NPU6 IncF plasmid conjugative transfer pilus assembly... 331 3e-89 UniRef50_Q8D6A1 ATPase involved in DNA repair n=5 Tax=Vibrionale... 324 3e-87 UniRef50_B4RLS1 TraB n=9 Tax=Neisseria RepID=B4RLS1_NEIG2 310 8e-83 UniRef50_A8QYQ1 TraB protein n=2 Tax=Legionellaceae RepID=A8QYQ1... 301 3e-80 UniRef50_Q8L277 Pilus biogenesis protein n=4 Tax=Bacteria RepID=... 299 2e-79 UniRef50_C5F1X5 Sex pilus assembly protein n=1 Tax=Helicobacter ... 293 1e-77 UniRef50_C4NUW9 TraB n=11 Tax=Gammaproteobacteria RepID=C4NUW9_E... 287 6e-76 UniRef50_C5SIK4 TraB pilus assembly family protein n=1 Tax=Astic... 287 8e-76 UniRef50_C5ANX7 TraB pilus assembly family protein n=2 Tax=Burkh... 285 3e-75 UniRef50_Q0F360 TraB pilus assembly n=1 Tax=Mariprofundus ferroo... 282 1e-74 UniRef50_A0B4M9 TraB pilus assembly family protein n=1 Tax=Burkh... 280 1e-73 UniRef50_A5KZF6 ATPase involved in DNA repair n=1 Tax=Vibrionale... 279 1e-73 UniRef50_A1WDF7 TraB pilus assembly family protein n=2 Tax=Burkh... 267 8e-70 UniRef50_D0Z4T3 TraB pilus assembly n=1 Tax=Photobacterium damse... 265 2e-69 UniRef50_A7H3G6 Sex pilus assembly protein n=3 Tax=Campylobacter... 264 5e-69 UniRef50_C4Z000 Putative TraB pilus assembly n=1 Tax=Rickettsia ... 261 4e-68 UniRef50_A1W656 TraB pilus assembly family protein n=6 Tax=Betap... 261 4e-68 UniRef50_Q2LTZ2 Pilus assembly protein n=1 Tax=Syntrophus acidit... 261 5e-68 UniRef50_B2I3Y9 TraB pilus assembly family protein n=1 Tax=Acine... 260 1e-67 UniRef50_A4JTP2 TraB pilus assembly family protein n=2 Tax=Burkh... 257 6e-67 UniRef50_B7XGQ7 Putative pilus assembly protein n=2 Tax=Pseudomo... 256 1e-66 UniRef50_Q1MY41 TraB pilus assembly n=1 Tax=Bermanella marisrubr... 254 8e-66 UniRef50_C1SHE3 TraB pilus assembly protein n=1 Tax=Denitrovibri... 251 4e-65 UniRef50_Q5NX52 Sex pilus assembly protein n=1 Tax=Aromatoleum a... 251 5e-65 UniRef50_C1MEJ9 Pilus biogenesis protein n=1 Tax=Citrobacter sp.... 250 8e-65 UniRef50_D2U0R2 Conjugative transfer pilus assembly protein TraB... 249 1e-64 UniRef50_C3NU45 IncF plasmid conjugative transfer pilus assembly... 248 4e-64 UniRef50_A3VN24 Putative conjugative transfer factor, TraB n=1 T... 247 7e-64 UniRef50_B4EQI2 Putative TraB conjugative transfer protein n=1 T... 244 4e-63 UniRef50_C0QUX1 TraB pilus assembly family protein n=1 Tax=Perse... 238 3e-61 UniRef50_Q5ZTS2 Putative conjugative transfer protein TraB n=1 T... 238 3e-61 UniRef50_B7J829 Conjugal transfer protein, putative n=1 Tax=Acid... 238 4e-61 UniRef50_D0SGY7 TraB pilus assembly family protein n=1 Tax=Acine... 237 6e-61 UniRef50_Q6MBA0 Putative F pilus assembly protein traB n=1 Tax=C... 235 3e-60 UniRef50_B3EB62 TraB pilus assembly family protein n=3 Tax=Prote... 228 3e-58 UniRef50_Q5WSC0 Putative uncharacterized protein n=2 Tax=Legione... 227 5e-58 UniRef50_C4K0M3 F pilus assembly protein TraB n=13 Tax=Rickettsi... 227 8e-58 UniRef50_A0L342 TraB pilus assembly family protein n=1 Tax=Shewa... 225 2e-57 UniRef50_B0RL09 TraB pilus assembly family protein n=2 Tax=Yersi... 219 2e-55 UniRef50_Q2N5I1 Pilus assembly protein n=5 Tax=Erythrobacter Rep... 219 2e-55 UniRef50_A4XE89 TraB pilus assembly family protein n=6 Tax=Sphin... 214 5e-54 UniRef50_Q3IUW6 Putative conjugative transfer factor, TraB n=1 T... 208 2e-52 UniRef50_A0R7R0 TraB pilus assembly family protein n=1 Tax=Pelob... 203 1e-50 UniRef50_Q19NS7 ThrB n=10 Tax=Enterobacteriaceae RepID=Q19NS7_ECOK1 180 7e-44 UniRef50_A9AU14 Putative uncharacterized protein n=1 Tax=Burkhol... 169 2e-40 UniRef50_D2U001 Conjugal transfer pilus assembly protein TraB (F... 133 2e-29 UniRef50_B3CUL3 Putative conjugative transfer protein TraB n=1 T... 121 5e-26 UniRef50_C4YZI3 F pilus assembly protein TraB n=1 Tax=Rickettsia... 97 1e-18 UniRef50_A5CDW0 Conjugative pilus assembly protein n=23 Tax=Orie... 86 3e-15 UniRef50_D2W236 FH2 domain-containing protein n=2 Tax=Naegleria ... 62 6e-08 Sequences not found previously or not previously below threshold: UniRef50_A9MS59 Putative uncharacterized protein n=3 Tax=Enterob... 68 5e-10 UniRef50_Q4QPC9 Conserved putative exported protein n=5 Tax=Haem... 66 3e-09 UniRef50_A5IEK4 Exported membrane protein n=4 Tax=Legionella Rep... 63 2e-08 UniRef50_Q5ZWU4 Exported membrane protein n=4 Tax=Legionella pne... 63 2e-08 UniRef50_C6DZ83 Conjugation TrbI family protein n=1 Tax=Geobacte... 60 2e-07 UniRef50_C2LLI8 Exported protein n=20 Tax=Proteobacteria RepID=C... 60 2e-07 UniRef50_C3WYE2 Conjugal transfer protein TrbI n=2 Tax=Fusobacte... 59 5e-07 UniRef50_B3DV88 Type IV secretory pathway, VirB10 component n=1 ... 58 1e-06 UniRef50_C3WX80 Conjugal transfer protein TrbI n=3 Tax=Fusobacte... 55 7e-06 UniRef50_C7N9P2 Conjugation TrbI family protein n=1 Tax=Leptotri... 54 9e-06 UniRef50_A8EYQ4 F pilus assembly protein TraB n=2 Tax=Rickettsia... 54 1e-05 UniRef50_A5TXL6 Possible conjugal transfer protein TrbI n=3 Tax=... 53 3e-05 UniRef50_B1ZQ46 Putative uncharacterized protein n=2 Tax=Opitutu... 51 8e-05 UniRef50_B4W818 Bacterial conjugation TrbI-like protein n=2 Tax=... 51 8e-05 UniRef50_B4U0L4 Emm-like cell surface protein CspZ.2 n=2 Tax=Str... 50 1e-04 UniRef50_A7RH89 Predicted protein (Fragment) n=1 Tax=Nematostell... 50 2e-04 UniRef50_D0SZZ2 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 49 4e-04 UniRef50_C8PWQ0 Putative membrane protein n=1 Tax=Enhydrobacter ... 47 0.001 UniRef50_C6N554 Exported membrane protein n=3 Tax=Legionella Rep... 47 0.001 UniRef50_C9M9B5 Conjugal transfer protein TrbI n=1 Tax=Jonquetel... 46 0.002 UniRef50_A7FC40 Conjugal transfer protein TrbI n=1 Tax=Yersinia ... 46 0.002 UniRef50_Q0AD29 Conjugation TrbI family protein n=1 Tax=Nitrosom... 46 0.002 UniRef50_Q93894 Protein M03B6.3, confirmed by transcript evidenc... 46 0.004 UniRef50_UPI00006CE94C YEATS family protein n=1 Tax=Tetrahymena ... 46 0.005 UniRef50_A6GUS3 Conjugation TrbI family protein n=2 Tax=Bacteria... 46 0.005 UniRef50_C7Z9F5 Putative uncharacterized protein n=1 Tax=Nectria... 45 0.005 UniRef50_UPI0000E495BC PREDICTED: hypothetical protein n=1 Tax=S... 45 0.006 UniRef50_B4JS72 GH18674 n=2 Tax=Drosophila RepID=B4JS72_DROGR 45 0.007 UniRef50_Q210W5 Conjugation TrbI-like protein n=28 Tax=Alphaprot... 44 0.010 UniRef50_C1F4R5 Putative conjugal transfer protein, TrbI family ... 44 0.012 UniRef50_C1CP01 Pneumococcal surface protein A n=75 Tax=Streptoc... 44 0.016 UniRef50_A8PDB5 Predicted protein n=1 Tax=Coprinopsis cinerea ok... 44 0.017 UniRef50_B6H463 Pc13g07600 protein n=1 Tax=Penicillium chrysogen... 43 0.031 UniRef50_Q6CC43 YALI0C12617p n=1 Tax=Yarrowia lipolytica RepID=Q... 42 0.057 UniRef50_A2CDD9 Proline-rich region n=2 Tax=Prochlorococcus mari... 42 0.060 UniRef50_B5E3T5 Surface protein PspC n=11 Tax=Streptococcus pneu... 41 0.082 >UniRef50_P41067 Protein traB n=45 Tax=root RepID=TRAB1_ECOLI Length = 475 Score = 601 bits (1548), Expect = e-170, Method: Composition-based stats. Identities = 475/475 (100%), Positives = 475/475 (100%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT Sbjct: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV Sbjct: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP Sbjct: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 Query: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST 240 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST Sbjct: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST 240 Query: 241 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK 300 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK Sbjct: 241 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK 300 Query: 301 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV 360 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV Sbjct: 301 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV 360 Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT 420 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT Sbjct: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT 420 Query: 421 QSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQGGGNDGK 475 QSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQGGGNDGK Sbjct: 421 QSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQGGGNDGK 475 >UniRef50_B3WTP8 Protein TraB n=4 Tax=Enterobacteriaceae RepID=B3WTP8_ECOLX Length = 454 Score = 384 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 217/461 (47%), Positives = 291/461 (63%), Gaps = 24/461 (5%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAE-QEPVPDMTGVVD 59 MA++N IV+R+Q +V+G + G +S++++ A EP PDMTGVV+ Sbjct: 1 MANVNKIVRRRQLALFIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVN 60 Query: 60 TTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQ 119 +FD+KV++ A E Q + Q + +++R E+ ++ + Q RI +L +N L Q Sbjct: 61 QSFDNKVQRSAIAEAQRLNKETQAEIKKLRTEMGIIGRDLKGSQERIRELEDENKLLQTQ 120 Query: 120 VKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVT 179 ++A G N + + EP+P AS + + V PPT F+P G Sbjct: 121 IEA-GKNFDSLSAEPLPGALASQGKAAVQ--------------AGEVLPPTTFWPAGGGQ 165 Query: 180 PPPQVTYQSVPVPNRIQRKVFT-RNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNE 238 P V P + + FT + Q P P+I SGSFA+A+++EGADANASVTG++ Sbjct: 166 APVAPVMTPVQRPGMMDSQEFTLPDTTPQKPRFPWISSGSFAEAIVVEGADANASVTGDK 225 Query: 239 STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMP 298 +TVPMQLR+TG V+MPN + +D TGCFV LEAWGDVSSERAIVRTR+ISC ID Sbjct: 226 NTVPMQLRLTGKVQMPNDQEFDLTGCFVTLEAWGDVSSERAIVRTRSISCKLGDDNIDQK 285 Query: 299 IKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAG 358 I GHVSF GKNGIKGEVVMRNG+IL +A G+GF+DGIG+G+E+AS VG+GATA+ AG Sbjct: 286 IAGHVSFMGKNGIKGEVVMRNGQILLYAGGSGFLDGIGKGIEKASSTTVGVGATASMSAG 345 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 ++ + G+GGG S AA+TLSDYYIKRAEQYHPVIPIGAGNEVT+VFQDGFQL+T+EE + Sbjct: 346 EIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAK 405 Query: 419 RTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLN 459 R + P SA + + G NT MLK L + Sbjct: 406 AAARRKQNQ------PSASSAPAAMPG-NTTDMLKHLQDFR 439 >UniRef50_B6ICF4 TraB protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF4_ECOSE Length = 448 Score = 363 bits (932), Expect = 6e-99, Method: Composition-based stats. Identities = 207/439 (47%), Positives = 269/439 (61%), Gaps = 32/439 (7%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 MA++N +V+RKQ L + ++ +G ++ GA Y+S V SG ++ P P+MTGVV Sbjct: 1 MANVNQLVRRKQNLRMAVIALGISAVGAGAWYMSTVKSSGKAAQTQQKAPPPNMTGVVSQ 60 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 TFD KV A ++Q TA++ +K+ + L + ++ D + +IE+ + A L + Sbjct: 61 TFDKKVSDAAVADIQHTASEAEKKLKAFESRLAKMEQREQDYRAKIEEQENELAILRAEQ 120 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFY-PGNGVT 179 +A+ N P P G+P P S +VPPPTAFY PG G Sbjct: 121 EAMKENGG-------------PELPAGQPVPSFGTGS-------SVPPPTAFYQPGGGGE 160 Query: 180 P---PPQVTYQSVPVPNRIQRKVFTRNEGKQ-----GPSLPYIPSGSFAKAMLIEGADAN 231 P YQ P P + T + G++ P LPYIPS SFA A++IEGADAN Sbjct: 161 ANNLAPVTQYQVTPQPKK-GLSSMTVDYGEKSAVSDKPLLPYIPSASFAPAVVIEGADAN 219 Query: 232 ASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD 291 ASVTGN PMQ R+TGLV MPN KTYD TGC V A+GD+SSERA++RT +SC K+ Sbjct: 220 ASVTGNSDPSPMQFRLTGLVRMPNDKTYDLTGCMVTAGAYGDISSERALIRTDRLSCHKN 279 Query: 292 GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGA 351 G IDMP KGHVSF+GKNGIKGE VMRNGKI+GWA+ AG VDGIG G+ + Q G GA Sbjct: 280 GHVIDMPFKGHVSFKGKNGIKGEPVMRNGKIIGWAFAAGAVDGIGSGVAKIGQETPGAGA 339 Query: 352 TAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKT 411 A+ V+ +GGGAS+ +TLSDYYIKRAEQYHPVIP+GAG EVTVVFQ+GFQLK Sbjct: 340 VASVSGSTVMNGALGGGASQVGKTLSDYYIKRAEQYHPVIPVGAGTEVTVVFQEGFQLKY 399 Query: 412 VEE--MALERTQSRAEEDN 428 +E + Q++A DN Sbjct: 400 TDEDKASTPARQAKAVVDN 418 >UniRef50_B2VB09 TraB protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB09_ERWT9 Length = 457 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 173/475 (36%), Positives = 253/475 (53%), Gaps = 42/475 (8%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 M +IN + KRKQ L V++ S G +YL+ D + + Q ++GVV Sbjct: 1 MGNINMLTKRKQLATLIGVLIA-GSVGAGIVYLTAGDSKPAAQAIKPQSAP--VSGVVTN 57 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAAL--AE 118 F ++V++ + Q A ++K+ ++++++ ++ Q + ++ L AL + Sbjct: 58 AFTEQVQKSVLQQQQERTAVLEKELDDLKKQ---VSNQPSGESADVQVLKATVDALLKNQ 114 Query: 119 QVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGV 178 + A N A GEP V + QGS + P F G G Sbjct: 115 KASAEQNNGAHAVGEP--------------------EVKWNVQGSNSYSSPPVFPVGQGG 154 Query: 179 TPPPQVTYQSVPVPNRIQRKVFTRNEGK-QGPSLPYIPSGSFAKAMLIEGADANASVTGN 237 P IQ F+ K +G LP+I SGSF A +IEGADANASVTG Sbjct: 155 NNYVPPKNDPRPQIGGIQHTSFSWEHPKVKGNPLPWISSGSFINASMIEGADANASVTGQ 214 Query: 238 ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDG-KTID 296 +S+ P+ + G +PN Y+ C V E +GD+SSER VRT +ISC G + +D Sbjct: 215 QSSTPVVFTLLGNASLPNGHKYNLDQCRVTGEIYGDISSERGEVRTDHISCNISGDRHVD 274 Query: 297 MPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYG 356 MP KGHVS++GK GI+G+ VMRNGKI+ +A AG + G+G G+ + +VG+GATA Sbjct: 275 MPFKGHVSYQGKEGIRGKPVMRNGKIIAYAGAAGVLSGLGSGISESGTTSVGIGATATPA 334 Query: 357 AGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMA 416 AG++ + GGGASKAA TLS Y+IKRAEQYHPVI IGAGN VTVVFQ+GFQL T+E+ Sbjct: 335 AGEIARQAFGGGASKAADTLSQYWIKRAEQYHPVIDIGAGNAVTVVFQEGFQLTTIEDEI 394 Query: 417 LERTQSRA------------EEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLN 459 +++S A +D + +PPS + H N D ++++ +L+ Sbjct: 395 ARKSESAAGQVVDKVAGNMSADDGARTLSSLPPSGQQHGAIINPDDVIRKAKDLD 449 >UniRef50_A4WGS4 TraB pilus assembly family protein n=4 Tax=Enterobacteriaceae RepID=A4WGS4_ENT38 Length = 466 Score = 354 bits (908), Expect = 4e-96, Method: Composition-based stats. Identities = 182/469 (38%), Positives = 270/469 (57%), Gaps = 24/469 (5%) Query: 3 SINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPV--PDMTGVVDT 60 + N +R Q L V+ A+ GG ++ + + E PV P+MTGVV Sbjct: 4 NENLKTRRTQLAVLATVIAVGAATAGGVMWYGN-----HQEQQKHPAPVAAPNMTGVVTA 58 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 +F+++V A + Q + +++QY + + ++ + + ++++ + + L +QV Sbjct: 59 SFNEQVNDAALAQQQAKTSALEQQYATLAQ---LVAQNKLTTEQKLAEKDAEIQRLTDQV 115 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 + + T + P P P P + PP+ SV P A G Sbjct: 116 QKAPGSNTTTGQQSPPAGQNGTPLP----GPVAAGQARPPEYSVTPNAPAATGVNMGQGA 171 Query: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPS-LPYIPSGSFAKAMLIEGADANASVTGNES 239 + + F+ + K+ P+ LP+IPSGSF+ A++IEGADANASVTG ++ Sbjct: 172 GFYPGGSGQRLTGGLSTTKFSYDSLKKKPTKLPWIPSGSFSDAVMIEGADANASVTGQQN 231 Query: 240 TVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMP 298 T P+ LR+ G ++MPN+K Y A GCF+ E WGD+SSER VRT++ISC+ K+GK +DM Sbjct: 232 TSPVTLRLQGNIQMPNNKEYSADGCFIVGEIWGDISSERGTVRTQSISCVLKNGKHVDME 291 Query: 299 IKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAG 358 +GHVS++GKNGI+G+ VMRNG I+G+A AG + G G+G++ A+ P+VGLGATA GAG Sbjct: 292 FQGHVSYQGKNGIRGKPVMRNGMIVGYAGAAGMLSGFGEGIKSAATPSVGLGATADVGAG 351 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 DV K G GGGA+KAA TLS Y+IKRAEQYHPVI IGAGN+VTVVFQ GF+L+T+E+ Sbjct: 352 DVFKQGFGGGANKAADTLSQYWIKRAEQYHPVIDIGAGNQVTVVFQKGFRLETLEDAEDA 411 Query: 419 RTQSRAEE-----DNPESPVPVPP---SAESHLNGFNTDQMLKQLGNLN 459 + + ++ N SP P S + + N D +L+Q L Sbjct: 412 KAKEELQKAGNAAQNAVSPQPASQSTTSGTASVGNINPDDVLRQASQLR 460 >UniRef50_A9L6K3 TraB pilus assembly family protein n=8 Tax=Gammaproteobacteria RepID=A9L6K3_SHEB9 Length = 509 Score = 351 bits (900), Expect = 3e-95, Method: Composition-based stats. Identities = 131/477 (27%), Positives = 223/477 (46%), Gaps = 34/477 (7%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLSD---VDMSGNGETVAEQEPVPDMTGVV 58 +++N K++ + V+ G + + GALYL+ + A P+ D V+ Sbjct: 20 SALNEANKKRNW-----VIAGVGATVLGALYLAGDAYMSAPKRAPETAAGNPI-DFGAVI 73 Query: 59 DTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQD-----N 113 D F +K Q A T Q+ + QK +++ + ++ + + ++ +++ + + Sbjct: 74 DKDFTEKDNQSALTAQQIALDKQQKAIDKMLKSMEAIERSNEANRLDLKRNLETFQLTVS 133 Query: 114 AALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFY 173 + +++ A AN + + V S G + P + G +PP + Sbjct: 134 EKIDDKINAATANAMQHSNNNV-TDEFSTQGIDASAYPVRQSTRY--LGEQTLPPRPSVG 190 Query: 174 PGNGVTPPPQVTYQSVPVPNR------IQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEG 227 G + P Q P + + +N K+ Y+P+GSF A++ G Sbjct: 191 DGQSYSAPYQGGAIPPPATQNGIDSFALNWESPDQNLPKKRTPENYVPAGSFVTAVVTGG 250 Query: 228 ADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNIS 287 ADANA V G TVPM + T +PN K C V A+G++SS R IVRT +S Sbjct: 251 ADANAGVNGQGDTVPMVFQTTNQGVLPNGKPSKLNNCTVLGAAYGEISSSRGIVRTTRLS 310 Query: 288 CLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME--RASQP 345 C+ + + ID+P++ V G+NGI+G +M+NGKI+ A +G + GIG+ + + Sbjct: 311 CIFEDEIIDIPVEATVFNYGRNGIRGTAIMKNGKIVQMAGISGILTGIGETGKALSQTTS 370 Query: 346 AVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQD 405 LG+T++ D L G +S L+DYYIK AEQYHP+I + GN V +VF Sbjct: 371 NSALGSTSSVNGADALLNLAGSASSSVGSKLADYYIKLAEQYHPIIELNPGNTVNIVFLK 430 Query: 406 GFQLKTVEEMALERTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQL-GNLNPQ 461 GF L V E ++ ++ P SA + + ++ +L+Q+ GN+ PQ Sbjct: 431 GFPLDPVGIQEYEEALAQQAQN--------PVSATAQILNTISNPLLEQMPGNIKPQ 479 >UniRef50_D0Z576 IncF plasmid conjugative transfer pilus assembly protein TraB n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z576_LISDA Length = 457 Score = 336 bits (862), Expect = 9e-91, Method: Composition-based stats. Identities = 121/460 (26%), Positives = 192/460 (41%), Gaps = 36/460 (7%) Query: 28 GGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEE 87 G L ++ ET P PD V+ F DK + A Q T ++K E Sbjct: 5 FGLCGLVFWLINKPKETFVP--PSPDFEPVITEDFTDKDAKSALQAQQRTIIALEKSVSE 62 Query: 88 IRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEG 147 +++E L++Q R+E+ DN+ E+ + L N + A + P++ P Sbjct: 63 LKKERQRLSEQVATGLDRLEQRLNDNS---EETERLINNNLDAFRDSATTDPSNSVTP-- 117 Query: 148 EPQPGNTPVSFPPQGSVAVPP-----PTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTR 202 S P GS+ P P + + + P T + + + + Sbjct: 118 ---------SLDPFGSLDQYPQVPTAPRGYLDDHSLKDIPTTTRRGIQTFS-YRWPKMAS 167 Query: 203 NEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDAT 262 + S Y+P+GSF A+L+ ADANA V T P+ R +PN K Sbjct: 168 ETTYRRTSDNYVPTGSFVTAVLMGAADANAGVNAQGDTAPIVFRTIHEGILPNGKRSRIK 227 Query: 263 GCFVGLEAWGDVSSERAIVRTRNISCL--KDGK--TIDMPIKGHVSFRGKNGIKGEVVMR 318 CFV +G++SS R I R +SC+ +DG+ +D+P++G +NG++G VMR Sbjct: 228 DCFVTASVYGEISSNRGIARLNRMSCIFDEDGEEDILDIPVRGTAFSFARNGMRGTPVMR 287 Query: 319 NGKILGWAWGAGFVDGIGQGMERASQPAV--GLGATAAYGAGDVLKMGIGGGASKAAQTL 376 NGKI+ A +G G+G + AS + G + L G L Sbjct: 288 NGKIIQMAGISGLFTGLGDTAKNASSSTITGPSGVVSTVDPSKALLNMGGSALENIGSKL 347 Query: 377 SDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAEEDN-----PES 431 +DYYIK AEQYHP+I + G+ V +VF +GF L + E+ S E Sbjct: 348 ADYYIKLAEQYHPIIELNPGSVVNLVFLEGFPLDPLMRDGYEQRLSAQEVPQSVGDMASQ 407 Query: 432 PVPVPPSAESHLNGFNTDQMLKQLG---NLNPQQFMSGSQ 468 + + + T+ + +QL QF + +Q Sbjct: 408 LMTNMMNPLAAQPTLPTNPLKQQLSAQLQQKANQFDATTQ 447 >UniRef50_C9NPU6 IncF plasmid conjugative transfer pilus assembly protein TraB n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU6_9VIBR Length = 462 Score = 331 bits (848), Expect = 3e-89, Method: Composition-based stats. Identities = 127/457 (27%), Positives = 190/457 (41%), Gaps = 42/457 (9%) Query: 7 IVKRKQYLWLGIV-VVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDK 65 I KR ++ ++ V+ A I ++ ++ D A P ++D F D Sbjct: 24 IAKRNTWVSASVIGVLAIAGIIVAWVFRTESDHP------ATLSPPLHFEHIIDPGFTDL 77 Query: 66 VRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGA 125 +Q A + + +Q I+ +L + KQ + +E+ Q AL Sbjct: 78 DQQSALAHQDLALQALTQQLTGIQEQLKQVQKQSERQSKELERKLQHLEALGVPSDTHEL 137 Query: 126 NPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP---PP 182 T + +P PA P EP S P Q ++ P P N P Sbjct: 138 TLGTPSSQPALPSPAVTPSLSLEP-------SSPTQATLEADTPWLEEPTNMNMPRYHSV 190 Query: 183 QVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVP 242 + + PV + K Y+PSGSF AM+ GAD NA V TVP Sbjct: 191 DFIWSAPPVKKHVSLKT-------------YVPSGSFVTAMVTGGADTNAGVLAQGDTVP 237 Query: 243 MQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIKG 301 + + +PN + C + A+G+VSS R +VRT ISC+ DG ID +KG Sbjct: 238 LVFQTLNRGILPNGQPSRLDQCTITASAYGEVSSSRGVVRTDKISCVLDDGTLIDQAVKG 297 Query: 302 HVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAV--GLGATAAYGAGD 359 G+NGI+G +++NG I+ A AG + G+G+ + S+ LGAT + Sbjct: 298 TAFNFGRNGIRGTTLLKNGDIVQMAGLAGILTGLGETGKALSEHTTLHPLGATQTLKSDQ 357 Query: 360 VLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALER 419 +G + LSDYYIK AE YHP++ I G V +VF +GF L + Sbjct: 358 APLNLLGHAGATVGAKLSDYYIKLAETYHPIVEINPGTVVNIVFLEGFTLTPLN------ 411 Query: 420 TQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLG 456 QS A+E P++ PP L+Q G Sbjct: 412 -QSGAQEVAPQTSR--PPHTLGQPPINPLADELRQEG 445 >UniRef50_Q8D6A1 ATPase involved in DNA repair n=5 Tax=Vibrionales RepID=Q8D6A1_VIBVU Length = 493 Score = 324 bits (831), Expect = 3e-87, Method: Composition-based stats. Identities = 115/480 (23%), Positives = 205/480 (42%), Gaps = 28/480 (5%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTT 61 IN + ++ +A + + + QEPV + +++ Sbjct: 21 GEINQRTASRNNTV--TIIAVSALLLAALALYKYTRPPPPTQKESHQEPV-EFGAIIEQD 77 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALA-EQV 120 F + Q A + Q T + ++KQ ++ + + + + +R+IE+ + A L EQV Sbjct: 78 FVETDNQSALSLQQKTLSALEKQIADLTKSMRT---HKEETERKIEQAKEKTARLVEEQV 134 Query: 121 KALGANPVTATGEPVPQMPAS--------PPGPEGEPQPGNTPVSFPPQGSVAVPPPTAF 172 + N + ++ + P +P N+ +F G +PP Sbjct: 135 REEFRNKEAQLQSRIDELEHNTSELVNTEPYSTIHTQRPMNSSETF---GQHKLPPRPIA 191 Query: 173 YPGNGVTPPPQVTYQSVPVP-NRIQRKVF-----TRNEGKQGPSLPYIPSGSFAKAMLIE 226 N S +P NR + F + + Y+P+G+F A++ Sbjct: 192 SSNNNPDMAQMQYQPSEQIPFNRNEFDSFNFFWESDETTYHRTTENYVPTGTFVTAVVTG 251 Query: 227 GADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNI 286 GAD NA V G T P+ + +PN + + C + ++G++SS R I+RT + Sbjct: 252 GADTNAGVLGQGDTTPVVFQTIHEGILPNGEKSKLSNCTITGSSYGEISSSRGIIRTNRL 311 Query: 287 SCLKD-GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME--RAS 343 SC++D G +D+ IKG G+NGI+G +++NG+I+ A AG ++GIG+ + + Sbjct: 312 SCIQDEGHILDVAIKGTAFNFGRNGIRGTTILKNGEIVQMAGIAGILNGIGETGQALSQT 371 Query: 344 QPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVF 403 G T++ + D +G S + LSDYYI AE YHP++ I G V +VF Sbjct: 372 TSTSAFGTTSSINSQDAALNLLGNATSSVGEKLSDYYIGLAELYHPIVEINPGAVVNIVF 431 Query: 404 QDGFQLKTVEEMALERTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQF 463 +GF L + ER Q + + +S + + LN ++ Q + P F Sbjct: 432 LEGFPLDPLMAEEYERQQLAEQSMSSQSNQILDVITNAPLNPL-AKELSTQGIEVPPTPF 490 >UniRef50_B4RLS1 TraB n=9 Tax=Neisseria RepID=B4RLS1_NEIG2 Length = 437 Score = 310 bits (794), Expect = 8e-83, Method: Composition-based stats. Identities = 117/432 (27%), Positives = 196/432 (45%), Gaps = 33/432 (7%) Query: 8 VKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTF----- 62 +++Q G+V A+ +G A+Y+ + GN + AE V + ++ T F Sbjct: 13 ARKRQLAIAGMVAGSMAAIVGSAIYV----IEGNKKKSAEVTQVQNKRQILRTDFTSPQA 68 Query: 63 ---DDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQ 119 D+ + + + A + + E + +EL K+ + + LG D Sbjct: 69 GITDNSLWMNTESSKIEYANRKISELETMVQELK--EKENSSNPDTSKGLGPDGLGKPPA 126 Query: 120 VKALGANPVTATGEPVPQMPASPP---GPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGN 176 + +G N P +P P P + Q T P Sbjct: 127 ISGIGDNGRLPPAPPAGTLPNGAPPADRPIERKIVSGSMSEAELQPGTTGSVNTG-NPNE 185 Query: 177 GVTPPPQVTYQSVPVPNRIQRK---------VFTRNEGKQGPSLPYIPSGSFAKAMLIEG 227 V PQ+ ++ V ++ R ++GK YIPSG+F +++L+ G Sbjct: 186 NVRVSPQLK-EAEWVKSKTPRMNIEVVEDGGKVVVSQGKFRARDSYIPSGTFFRSVLLGG 244 Query: 228 ADANASVTGN-ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNI 286 DA S P+ +R+T ++PN Y+ CFV +A+GD+SSERA +R +N+ Sbjct: 245 VDAPTGGEAQNASPHPVLMRVTDFAQLPNRFKYNFRECFVTGQAYGDISSERAYIRLQNL 304 Query: 287 SCL-KDGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA-- 342 SC+ DG+ IDMP+KG+V GK G++G +V + G++L A +G + G+G+G+ A Sbjct: 305 SCVGTDGRAIDMPVKGYVAGEDGKTGVRGNLVTKQGQLLANALMSGVISGMGKGVSEAFK 364 Query: 343 SQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVV 402 G+T + D + GI G AA L++YYIK A++ PV+ + AG +V VV Sbjct: 365 VTNNTAFGSTTSIRGSDQYRAGIASGIGGAADRLAEYYIKLADKVFPVVEVNAGRQVDVV 424 Query: 403 FQDGFQLKTVEE 414 G ++ T E Sbjct: 425 LTQGIEIDTGET 436 >UniRef50_A8QYQ1 TraB protein n=2 Tax=Legionellaceae RepID=A8QYQ1_9GAMM Length = 457 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 141/473 (29%), Positives = 216/473 (45%), Gaps = 51/473 (10%) Query: 1 MAS--INTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDM-SGNGETVAEQEPVPDMTGV 57 MA+ N +K +Q L VG + + V + G+ + + D+TG+ Sbjct: 1 MANWQFNKKIKGRQVRTL----VGVGCIVFFIIATMIVLLAEGHPKKTTTTKNSVDLTGI 56 Query: 58 VDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALA 117 V+ +F D V A T Q ++KQ E+ + + K G+ ++ +L L Sbjct: 57 VEESFTDAVADQALTTQQTELESLKKQISELTQNI----KTMGEAHQK--ELQAQKEELT 110 Query: 118 EQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNG 177 QV L V A E + E + P PQ + P T Y N Sbjct: 111 AQVHEL----VLANQEKQSHL-------EHQNNPSELNEVQNPQ--LWHNPNT--YAMNT 155 Query: 178 VTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSL-----PYIPSGSFAKAMLIEGADANA 232 + + P + + + R K P+ Y+PS + +A+++ GADA+A Sbjct: 156 MMNSGTTLSDAAPRIHTVSFRP-KRRMKKPHPNFYLNPAHYVPSNTSVRAVILGGADADA 214 Query: 233 SVTGNE-STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD 291 SV G + M + +PN + GC V ++GD+SSERA +SC Sbjct: 215 SVNGQSKNNGVMLFKFLEDGTLPNGQRSRLRGCRVSANSYGDISSERAFATLYRLSCAHP 274 Query: 292 GK-TIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERAS--QPAVG 348 G+ ID + G V F GK GIKG+ +MR+ K++ WA +G + G+ + A Q Sbjct: 275 GQPIIDKEVTGWVFFNGKVGIKGKPLMRDNKVMTWAGVSGALSGVASAAQYAQSVQAIGP 334 Query: 349 LGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 GAT+ + + GGASKAA TLS YY+KRAEQYHPVI +G+GN VTVVF+DGF Sbjct: 335 YGATSVVPSSQIAPFAAYGGASKAADTLSAYYVKRAEQYHPVIQVGSGNVVTVVFKDGFY 394 Query: 409 LKTVE---EMALERTQSRAE--------EDNPESPV--PVPPSAESHLNGFNT 448 L+ E + A+ + +++ E ++NP S + VPP + NT Sbjct: 395 LEPDEDKSQHAMNQVKAQHETQGLIASQDENPTSEMNFTVPPEVLGRIERLNT 447 >UniRef50_Q8L277 Pilus biogenesis protein n=4 Tax=Bacteria RepID=Q8L277_PROVU Length = 452 Score = 299 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 102/440 (23%), Positives = 165/440 (37%), Gaps = 45/440 (10%) Query: 5 NTIVKRKQY-LWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPV-------PDMTG 56 N K+K+Y LW G+ +V L L + + + + A +E V D TG Sbjct: 13 NLDAKKKRYALWAGLAIVIIP------LLLVIMPENSSPRSKATKEKVIQNVLTDSDTTG 66 Query: 57 VVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELD--VLNKQRGDDQRRIEKLGQDNA 114 V ++R + T + + + + LD LNK+ + + + Sbjct: 67 VSQNAIAARLR-----SLDETIKSTKTAVDTLNKTLDPDALNKRLTNIENVQKNEAAARQ 121 Query: 115 ALAEQVKALGANPVTATGE---------PVPQMPASPPGPEGEPQPGNTPVSFPPQG--- 162 L ++ L NP ++ PQ S E +PQ S Q Sbjct: 122 TLNNRIDTLIKNPPASSTGGALNPKNVFAAPQDGQSGEAAENQPQNARATASGTLQSVYE 181 Query: 163 SVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGP-SLPYIPSGSFAK 221 + P P+ F + SVP +Q+ + ++ + Y+P+ S Sbjct: 182 NDIAPDPSDFDHSADASKSKNEAPASVPNIVTVQQDIKEEHDSDEDTGPETYLPATSIIS 241 Query: 222 AMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIV 281 + I G DA + P +RI +PN D C + +GD+SSERA Sbjct: 242 GVFISGMDAPTAQNARNDPYPALIRIKKDAILPNRFRVDIRECGMLAAGFGDLSSERAYF 301 Query: 282 RTRNISCLK-DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGM 339 R+ I+C++ DG + I + V GK G++G +V + G+ L A AGF+ Q Sbjct: 302 RSEVITCIREDGAVFEASIDAYAVGEDGKAGVRGRLVTKQGQYLAKALTAGFLQAASQLF 361 Query: 340 ERASQPAVGLGATA---------AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPV 390 S P + + + ++ G A L+D+Y+K A PV Sbjct: 362 SVQSIPTINVNRDGNSRGGSPYEQVMSSQAMQGAAISGVGGALNRLADFYMKMATDLFPV 421 Query: 391 IPIGAGNEVTVVFQDGFQLK 410 I I V V Q G LK Sbjct: 422 IEIDPARSVDFVVQKGVSLK 441 >UniRef50_C5F1X5 Sex pilus assembly protein n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F1X5_9HELI Length = 443 Score = 293 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 115/443 (25%), Positives = 199/443 (44%), Gaps = 52/443 (11%) Query: 9 KRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQ 68 ++++ L+LG+ ++ + L S + N ET A + ++ V T D+ VR Sbjct: 27 QKRKILFLGVAILVI--LVFVFLIFSG---NSNSETNAINDK--NIGNFVLTDKDENVRT 79 Query: 69 HATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPV 128 + +K+ + + LN + ++ + L + ++ + Sbjct: 80 NWIGSAAEDLELSKKKIDSLSITNQRLNTELETLKKTVGNLVTNKEKKEKESQ------- 132 Query: 129 TATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAV----PPPTAFY----PGNGVTP 180 ++ P+ G + P G+V + P P G P Sbjct: 133 ----------SSNIETPKNVTLNG---IELPDLGNVNLYKDFPKPNESNNFGLEKTGEVP 179 Query: 181 PPQVTYQ--------SVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANA 232 P Q TY+ + N QR + E + YIP+GSF K +L+ G DA Sbjct: 180 PIQETYEERTRALENPLVFNNHAQRTIQEVKEEAK--EKHYIPTGSFVKVVLLNGVDAPT 237 Query: 233 SVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KD 291 + +P+ +R+ +PNS YD CF+ E +GD++SERA +RT +SC+ D Sbjct: 238 MTQAKTNPLPVLMRVVDTSVLPNSWQYDIKDCFITGEGYGDLTSERAYIRTNTLSCMAND 297 Query: 292 GKTIDMPIKGHVSF-RGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLG 350 G+ I++ KG VS GK G+KG VV + G +L AGF+ G+G+ + + G Sbjct: 298 GRHINLDFKGAVSGEDGKIGLKGRVVTKQGALLARTLIAGFLQGVGESFGQQDTTTIVSG 357 Query: 351 ATAA-----YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQD 405 + A + + G+ G S +A+ L+D+Y+K A+Q PVI I AG E+TV+ D Sbjct: 358 SGTTTVPLDQTANEAFQQGLFQGLSDSAEKLADFYLKMADQISPVIEISAGREITVITTD 417 Query: 406 GFQLKTVEEMALERTQSRAEEDN 428 ++K++EE A + T + ++ N Sbjct: 418 LTEIKSIEEEAKKSTSNNTKQPN 440 >UniRef50_C4NUW9 TraB n=11 Tax=Gammaproteobacteria RepID=C4NUW9_ECOLX Length = 438 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 99/442 (22%), Positives = 174/442 (39%), Gaps = 40/442 (9%) Query: 6 TIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDK 65 +K+++ + G + + + E QE + + +T Sbjct: 9 LDPNKKRWVS----IAGGVFVLFAVVTM-FSGEPKKEEKRGRQETIKHVLTDKNTREIGI 63 Query: 66 VRQHATTEM-QVTAAQMQKQYEEIRRELDVLNKQRGDD----------QRRIEKLGQDNA 114 A +M + ++K+ E +++EL+ G ++ +++L Q N Sbjct: 64 DSLSADVKMVSRENSDLKKELERVKKELEETKTTAGKSSDVGREMTRLRQDLDRLTQKNM 123 Query: 115 ALAEQVKALGANPVTATGEPVPQMPASP---------PGPEGEPQPGNTPVSFPPQGSVA 165 LA++V+ A T++ + + P + P S Sbjct: 124 ELAKKVETGAAGGKTSSSSEDARADVNGASGGDGQFMEKKLDYKDPASFFRDAPLPDSKG 183 Query: 166 VPPPTAFYPGNGVTPP-PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAML 224 P T G T P Q+ S P + + Y+PSGS +L Sbjct: 184 GAPATGKGDGRDATKPGIQIVSYSQKAPE-------VEEKDNKDDESIYLPSGSILTGVL 236 Query: 225 IEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTR 284 I G DA S P LRI +PN D CF+ + +GD+SSERA +R Sbjct: 237 INGMDAPTSQGARRDPFPSTLRIQKEAILPNRFRADVRECFLIVSGYGDLSSERAYLRGE 296 Query: 285 NISCLK-DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA 342 SC++ DG I+ + + V GK G++G VV + G+I+ + AGF+ G+ + + Sbjct: 297 TFSCVRDDGGVIEAKLDSYAVGEDGKAGVRGRVVSKQGQIIAKSLMAGFLGGVSEAFDVN 356 Query: 343 SQP--AVGLGATAAYG---AGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGN 397 P + G+ Y + +L+ GASKA ++ +YI AE PVI + AG Sbjct: 357 PVPVVSTNPGSNTQYQSVFSDQMLQGAAVKGASKALDRIAQFYIDMAEGIFPVIEVDAGR 416 Query: 398 EVTVVFQDGFQLKTVEEMALER 419 +V ++ G +L+ ++ Sbjct: 417 QVDIIVTKGTKLQIRSTGGTKK 438 >UniRef50_C5SIK4 TraB pilus assembly family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIK4_9CAUL Length = 442 Score = 287 bits (733), Expect = 8e-76, Method: Composition-based stats. Identities = 117/432 (27%), Positives = 190/432 (43%), Gaps = 44/432 (10%) Query: 6 TIVKRKQYLWLGIVVVGTASAIGGALYLSDV--------DMSGNGETVAEQEPVPDMTGV 57 K LW I+ G A+ +GG S V E V + +GV Sbjct: 23 EAKKNSTLLWASII--GVAAVLGGFAVYSAVFPPDPKPKQKLTKEEAVRIKGTASVASGV 80 Query: 58 -VDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAAL 116 + T ++ + ++M Q++ + + E D LN + D+ ++ Q Sbjct: 81 PISPTAENAQLKSERSDMDARLRQLEAENAALSAERDTLNSRNLQDREEAYQMLQ----- 135 Query: 117 AEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSF---PPQGSVAVPPPTAFY 173 AE+ + G++P G P + P P P P + P+ S A Sbjct: 136 AERDRRGGSDPHPTRGYPTEAADGAGFSPTPNPAPSLQPDANGKERPRRSFRTVSMNASS 195 Query: 174 PGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANAS 233 GNG V ++ V +RI+ Y+P S+A A ++ G D Sbjct: 196 AGNGELAAQPVAQKASAVTDRIETF----------DPSEYVPPNSYATARVLVGVDMQTG 245 Query: 234 VTGNESTVPMQLRIT----GLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL 289 V+GN P+ LRI G+ ++ D GC + A+ ++SSE+ V+ + I+C Sbjct: 246 VSGNSDPKPVLLRIRTPAFGVGMDGKFQSSDLRGCTINGAAYAELSSEKVYVKLQRITCE 305 Query: 290 -KDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVG 348 K+GK + P++G+V+++GK G++G+VV R G A+ AG G+GQ ME+ Q + Sbjct: 306 GKNGKFLTSPVEGYVTYKGKTGVRGKVVRREGDYASKAFIAGTFQGLGQAMEKNVQGTIS 365 Query: 349 ----------LGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNE 398 + +G++ + +G G S A L+DYYIKRAEQY PVI + G + Sbjct: 366 GKFGESDAGSIINARPLSSGEIGQASVGSGVSNAGGMLADYYIKRAEQYQPVIEMPTGID 425 Query: 399 VTVVFQDGFQLK 410 V +VF GF+ K Sbjct: 426 VEIVFLAGFRFK 437 >UniRef50_C5ANX7 TraB pilus assembly family protein n=2 Tax=Burkholderia glumae BGR1 RepID=C5ANX7_BURGB Length = 445 Score = 285 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 104/435 (23%), Positives = 177/435 (40%), Gaps = 46/435 (10%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 M N K++Q + +VV G +A+ L G + V D Sbjct: 1 MTDPNEANKKRQ-KIISMVVFGLLAALFVVGLLFTRQGKGPQQATTSVP----FAHVGDQ 55 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 D + Q + Q+ E++++LD N + + +++K+ Q L +Q Sbjct: 56 N-DKNAWRA----------QSEAQFAEMKKQLDAANGKADEATEKLKKVVQAQEDLKKQF 104 Query: 121 KALGANPVTATGEP--------VPQMPASPPGPEGEPQPGNTPVSFPPQGSVA------- 165 + + + + P P Q + + PP G A Sbjct: 105 DDQKKAGSGSAASAPAAASSTALDRALLNKPIPLNGQQAKSGAILNPPFGQNARGAAMDV 164 Query: 166 VPPPTAFYPGNGVTPP--------PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSG 217 V PP N +P P+ + + + Q+ N K + +IP+ Sbjct: 165 VAPPAKLDIINFDSPKKAGDDCVDPRFSSLPIDQAKQAQQDCLKANGKK---GVTFIPAT 221 Query: 218 SFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSE 277 +F + ++ G DA + + L + L +PN++ D TGC + A+GDVSSE Sbjct: 222 AFVRVFMMNGVDAPTGGEAQHDPLHVFLEVLDLANLPNARKLDITGCRILTSAYGDVSSE 281 Query: 278 RAIVRTRNISCL-KDGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGI 335 R ++ ++C+ K+G+T++M IKG V GK G++G +V ++G L + AG GI Sbjct: 282 RTMMHGETLACILKNGRTVEMTIKGTVMGEDGKEGVRGRLVSKSGSALAMSVLAGISSGI 341 Query: 336 GQGMERASQ--PAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPI 393 GQ +++ LG T+ V + IG G S+ A +L YYI+ AE+ PVI Sbjct: 342 GQAFSQSANTLNTTALGTTSIVNPSQVGRSAIGSGVSQGADSLKQYYIRAAEKLFPVIET 401 Query: 394 GAGNEVTVVFQDGFQ 408 G V G + Sbjct: 402 DGGRVVEFAVMKGAE 416 >UniRef50_Q0F360 TraB pilus assembly n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F360_9PROT Length = 445 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 109/417 (26%), Positives = 178/417 (42%), Gaps = 31/417 (7%) Query: 8 VKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVR 67 + +Q+L G +V+ ++ LS+ + ++ + + Sbjct: 38 RRGQQWLLAGGIVLVLLVLAVISVSLSERSEESADMQPVDAPGDVEVHSITAPGAGVSDK 97 Query: 68 QHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANP 127 T+ + MQ++ E+R+E+D L ++R D +G+ + + + L NP Sbjct: 98 DIWITKSESDMRNMQQEIRELRQEIDRLRQERADA-----GVGESHFNVEDGGSLL--NP 150 Query: 128 VTATGEPVP-QMPASPPGPEGEPQP-GNTPVSFPPQG----SVAVPPPTAFYPGNGVTPP 181 + P P PAS P P G T PQ S P T P +PP Sbjct: 151 TLPSLPPQPMNAPASIPAIGPNTAPTGTTIAPITPQPINLPSGQAPATTGMPPAQNPSPP 210 Query: 182 PQ----VTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGN 237 V + S PV K+ + SF A L+ G DA Sbjct: 211 QSGGMLVVHMSPPV----------DEPAKENDDRSAWLAISFTPARLLNGLDAATGGQAQ 260 Query: 238 ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTID 296 ++ P+ L +T + +MPN + CF+ +GD+SSERA +R ++C+ DG I+ Sbjct: 261 QNPQPVLLEVTDMTQMPNRYRENFRECFITAAGYGDISSERAYLRLEKLACIDDDGHAIE 320 Query: 297 MPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMER--ASQPAVGLGATA 353 I G+V GK G++G +V + G++L A AG GIG + ++Q LG T+ Sbjct: 321 EAIDGYVTGEDGKVGMRGRLVSKQGQVLAKALLAGIASGIGDAFTQSLSTQSVSPLGVTS 380 Query: 354 AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 G + GI G KA L+D+YI++A + +PVI + AG V V+ G +L Sbjct: 381 TIQPGAAARAGIYSGVGKALNKLADFYIQQANKLYPVIEVDAGRAVDVIINRGVRLP 437 >UniRef50_A0B4M9 TraB pilus assembly family protein n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0B4M9_BURCH Length = 440 Score = 280 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 104/432 (24%), Positives = 173/432 (40%), Gaps = 41/432 (9%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 M+ +N KR+Q I+ V + + G + VP Sbjct: 1 MSDVNQATKRRQR----ILTVAGFAVLAGLFAVGMFFTQSGPANRQFTTKVP-------- 48 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 F Q+ + A + Q E+ R + ++ + D +++ L + L++++ Sbjct: 49 -FTSLGDQNDRNAWR---AHSEAQLAELTRRMSSIDSRADDAVSQMKALSKAQDELSKRI 104 Query: 121 KALGANPVTATGE----PVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVP------PPT 170 A+ + P +A + P P + PP G P P Sbjct: 105 DAMKSTPASAPAPASGATSDRAALDKPIPLNGAPAKTGAILNPPFGKSGKPGVDMAAAPP 164 Query: 171 AFYPGNGVTP--------PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKA 222 TP P+ + + R Q+ N K+ + +IP SF + Sbjct: 165 KLAIIQFNTPTGNGADCVDPRYSSLPLDQATRAQQDCLKANGKKK---ISFIPGSSFVRV 221 Query: 223 MLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVR 282 ++ G DA +P+ L++ +PNS+ D T C + +A+GDVSSER +R Sbjct: 222 FMMNGVDAPTGGEAQHDPLPVFLQVLDPANLPNSRKLDITECRILTQAYGDVSSERTHMR 281 Query: 283 TRNISCL-KDGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME 340 + C+ K+G+T++MPIKG+V GK G++G +V + G L + AG GIGQ Sbjct: 282 GETLDCILKNGRTVEMPIKGNVMGEDGKEGVRGRLVSKAGSALAMSVFAGISSGIGQAFN 341 Query: 341 RASQP--AVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNE 398 +++ LG+T+ V + IG G S A L YYI+ AE+ PVI G Sbjct: 342 QSANTLSNTALGSTSIINPSQVGRAAIGSGVSGGADALKQYYIRTAEKLFPVIETDGGRI 401 Query: 399 VTVVFQDGFQLK 410 V G + Sbjct: 402 VEFAVTKGAEYD 413 >UniRef50_A5KZF6 ATPase involved in DNA repair n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZF6_9GAMM Length = 383 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 105/394 (26%), Positives = 176/394 (44%), Gaps = 31/394 (7%) Query: 71 TTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTA 130 T ++++ E + R+++ L ++ + ++ ++N L ++++ N Sbjct: 1 MTLQGQDIEDVKEKMENLNRDVERL---IISNENTLAQMKKENETLRDEIR---NNQEAH 54 Query: 131 TGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPP-PTAFYPGNGVTPPPQVTYQSV 189 +P PAS P P GS +PP P Y N + + Sbjct: 55 RTVALPSTPASASKEASHLTVMGDPA---PFGSRPLPPKPLPSYATNDLQKESFQYSNAD 111 Query: 190 PVPNRIQRKVF---------TRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST 240 Q + F + Q Y+PSG+F A + GADANA G T Sbjct: 112 KASFDDQGQAFDSFDFFWTASSESAYQRTVDNYVPSGTFVTAKITGGADANAGAFGQSDT 171 Query: 241 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK 300 P+ + +PN + C + +GD+SS R + RT +SC++DG+ +D+P++ Sbjct: 172 APIVFQTVHEGVLPNGEKSHLKDCTIIGSVYGDLSSSRGVARTHTLSCIRDGRILDIPVQ 231 Query: 301 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME--RASQPAVGLGATAAYGAG 358 G V G+NGI+G ++RNGKI+ A +G + G+G+ ++ LG+T++ + Sbjct: 232 GTVFNFGRNGIRGTSILRNGKIVQMAGISGILTGLGEAGAGLASTTSTSALGSTSSINSE 291 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 DV +G S+ LSDYYI AE YHP I I G V +VF GF L +E A++ Sbjct: 292 DVGLSLLGNATSEVGSKLSDYYIALAELYHPFIEINPGGIVNIVFTKGFPLD--DEEAIK 349 Query: 419 RTQSRAEEDNPE--------SPVPVPPSAESHLN 444 R +R E++ + + P+ LN Sbjct: 350 RYVARQEKEQAKPDTLLETITLNPLAAEVNQQLN 383 >UniRef50_A1WDF7 TraB pilus assembly family protein n=2 Tax=Burkholderiales RepID=A1WDF7_ACISJ Length = 449 Score = 267 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 97/427 (22%), Positives = 171/427 (40%), Gaps = 29/427 (6%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 M+ N K++Q + +G V G G ++L D SG + +E ++ Sbjct: 1 MSEPNAQTKKRQMMLIGGAVTGILGLAGAGMFLFD---SGPAQ---HREKPKTVSITAPG 54 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 T DDK + + E++ +L +Q + +E+L + AA Sbjct: 55 TVDDKDA--WRAQQAAKEKSNEALIGEVKTQLKAQEEQNKKLAQALEELKANKAAAGSAG 112 Query: 121 KALGANPVTATGE-PVPQMPASPPGPEGEPQP---GNTPVSFPPQGSVAVPPPTAFYPGN 176 A A P + + P+P + PG P G P V VP Sbjct: 113 SATAAKPDASVLDKPLPIGNGTGPGQRVLQSPNGKGGATTLNQPLNQVDVPARREVEIIT 172 Query: 177 GVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQ--------------GPSLPYIPSGSFAKA 222 + + +V ++ ++ ++P+GSF + Sbjct: 173 FNNAEGKGAAGAAVGGAGGITEVLGFPTDEKAKKYGTTSGGADGKKQTIEFLPAGSFVRV 232 Query: 223 MLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVR 282 ++ G DA + +P+ + + + N D C + WGD+SSER + R Sbjct: 233 AMLNGVDAPTGGQAQSNPLPVAFHVLDVANLANKHKLDIKDCRIVAATWGDLSSERMMGR 292 Query: 283 TRNISCLKDGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMER 341 T ++C+ +G+ ++M IKG V GK G++G +V + G++L A AG + GIG+ + Sbjct: 293 TETLACVINGEAVEMAIKGQVIGEDGKAGVRGRLVTKQGQLLANALFAGALSGIGKAFQS 352 Query: 342 ASQPAVGLGA--TAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEV 399 ++ G T + + IGGG A Q L+ YY+K A++ +PVI G V Sbjct: 353 SATITSTGGGGITQTIDPDKIGQAAIGGGVGSAGQQLAQYYLKAADKLYPVIETDGGRTV 412 Query: 400 TVVFQDG 406 ++ G Sbjct: 413 EILITKG 419 >UniRef50_D0Z4T3 TraB pilus assembly n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4T3_LISDA Length = 404 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 98/328 (29%), Positives = 149/328 (45%), Gaps = 24/328 (7%) Query: 17 GIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQV 76 +VV T SA+ YL+ ++ + E EP PD V+ + F K A Q Sbjct: 33 NLVVAATVSAMFAICYLAFKLITAPPQV--EIEPEPDYEPVITSDFTQKDSLSALQAQQQ 90 Query: 77 TAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGE--- 133 T +MQ + R+ D L++Q + +E+L E+ + N + A E Sbjct: 91 TIEKMQTTINGLVRQRDSLSEQI---KSGMEQLDTRFTKAFEEAQRNWLNDMDALQERMN 147 Query: 134 --PVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPV 191 P P +P P G N V+ P G+++ P +YP + + +PV Sbjct: 148 NQPPPIVPDMNEFPSGHSDNPNGRVNPDPFGTLSDQEP--YYPKPYPREYDKPDLKDIPV 205 Query: 192 PNRIQRKVFTRNEGKQGP-------SLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQ 244 R + F+ + + G S Y+P+GSF A+LI ADANA V T P+ Sbjct: 206 SKRQGIQTFSYSWPRAGSQTVYRRSSENYVPTGSFVTAVLIGAADANAGVNAQGDTAPIL 265 Query: 245 LRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL---KDGK--TIDMPI 299 R +PN K GCF +G++SS R I R +N+SC+ + GK ID+P+ Sbjct: 266 FRAIHNGILPNGKRSHLKGCFFTASVYGEISSNRGIARLQNMSCIFEKQKGKEEIIDIPV 325 Query: 300 KGHVSFRGKNGIKGEVVMRNGKILGWAW 327 +G G+NG++G VMRNGKI+ A Sbjct: 326 QGTAFNFGRNGMRGTPVMRNGKIMQMAG 353 >UniRef50_A7H3G6 Sex pilus assembly protein n=3 Tax=Campylobacterales RepID=A7H3G6_CAMJD Length = 446 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 109/427 (25%), Positives = 182/427 (42%), Gaps = 25/427 (5%) Query: 7 IVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKV 66 ++ Q ++ G G L+L+ G G+ +E V + V D Sbjct: 17 DAQKNQNKNKVLIFTGIFVIAGALLFLA-----GGGDKKESKEKVGNFNLVQDDPMAKTR 71 Query: 67 RQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGAN 126 E +K+ + + + L+KQ D ++ I + ++N A + N Sbjct: 72 W---VGEASNDLTLAKKRVDSLDTRNEELSKQVSDLKKIITDMKKENDANKRNYELNLKN 128 Query: 127 PVTATGEPVPQMPAS--PPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQV 184 + PA+ P + + P + + P+ + + P Sbjct: 129 IQKTQKKATENTPATVLEDTPNNQEEDLYKNFPQPNKNTANAQKPSDYGLTHFGDVPELN 188 Query: 185 TYQSVPVPNRIQRKVFT-------RNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGN 237 FT + + ++ + IP+GS KA+L+ G DA Sbjct: 189 EVTQTRYTPIQDSLSFTNIAKPEEKEKVEKKSTRHVIPTGSIVKAVLLSGMDAPTMTQAK 248 Query: 238 ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD-GKTID 296 +P+ +++T L +PN YD CF+ E +GD++SERA +R NISC+ + G+ I Sbjct: 249 TEPLPVLMKVTDLSILPNRWGYDVNECFLMGEGYGDLTSERAYIRVNNISCVTNKGQKIY 308 Query: 297 MPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAV--GLGATA 353 M +KG GK G++GEVV + G +L AGF+ G+G+G +Q G G T Sbjct: 309 MAMKGAATGEDGKLGLRGEVVTKQGALLARTLIAGFLQGVGEGFANQNQIVTQNGFGGTT 368 Query: 354 A----YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 A L+ G G SK+A+ L+D+Y+K A+Q PVI I AG E+ ++ +L Sbjct: 369 TTNSNMSASATLQTGAFKGLSKSAEKLADFYLKMADQVSPVIEIAAGREINIITTATLEL 428 Query: 410 KTVEEMA 416 KT+EE Sbjct: 429 KTLEEQQ 435 >UniRef50_C4Z000 Putative TraB pilus assembly n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4Z000_9RICK Length = 428 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 96/448 (21%), Positives = 194/448 (43%), Gaps = 62/448 (13%) Query: 3 SINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTF 62 S++T + ++ WL I + I G L ++ SG+ + +E + D+ + T++ Sbjct: 30 SVSTYRRAQERRWLYICL-----IIFGVLGVAMKLQSGSSSKIKHEEKIKDVGRNIGTSY 84 Query: 63 D----DKVRQ-HATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALA 117 D +K+ Q H +++ + ++Q++ E+ V++ R ++ + + Q+ +A Sbjct: 85 DAMDGNKIWQNHFEDKLRNSQHELQEKVEK------VIHDMRAKEEEQRKHRDQEMQKMA 138 Query: 118 EQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNG 177 EQ+K + + + + ++ + E + A G Sbjct: 139 EQLK-FAQDELRSAALELKRVSDIAESNKYEQE--------------------AIIRGGE 177 Query: 178 VTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVT-G 236 V+ S+ + + +Q K YIP SF + G + + Sbjct: 178 VS--------SIKIGSNVQ-------WDKPKDIRDYIPETSFVSGYTLGGIVTSTGINTA 222 Query: 237 NESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGK--T 294 +E+ P+ +R++ +P + D + C V ++GD+SSER I+R + C+ Sbjct: 223 SENATPVVIRLSNRGNLPKNINVDISKCRVQGSSYGDLSSERVIIRAEKLICIDPKTELV 282 Query: 295 IDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIG---QGMERASQPAVGLG 350 + G V G NGIKG+V+ + K + A+ + G+ +G+E + ++G Sbjct: 283 TTSDVIGVVHGDDGMNGIKGKVIATSSKHIKNAFIGSMLSGLASSSKGIEGLTLTSLGAV 342 Query: 351 ATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 T G DV G+ G S A + ++DYY++ AEQ PV+ + G +V V+F GF L Sbjct: 343 NTKRQGFKDVAGQGLLNGGSNAGEKIADYYLRLAEQMSPVLTVPGGVKVDVIFTKGFFL- 401 Query: 411 TVEEMALERTQSRAEEDNPESPVPVPPS 438 E+ +++ ++A + N + Sbjct: 402 --GEVGMQQKIAKARKINKQVQAEDYEE 427 >UniRef50_A1W656 TraB pilus assembly family protein n=6 Tax=Betaproteobacteria RepID=A1W656_ACISJ Length = 472 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 116/445 (26%), Positives = 186/445 (41%), Gaps = 26/445 (5%) Query: 9 KRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMT-GVVDTTFDDKVR 67 +++QY L ++ G + + D +G A+ +P GV+ + Sbjct: 31 RQRQYALLAAILGGGIGLLWMIFSFAGSDAKPHGGRAAQTQPGDVTNIGVMPPG----GQ 86 Query: 68 QHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANP 127 + + TA + QYE R +NK R + + Q A L +++ + Sbjct: 87 VNPVDQWVGTAGRKLAQYETEREAQSRVNKDREAFENK---TLQRFAELEKRLTSAQQAA 143 Query: 128 VTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQ 187 + P P PA P P P G+ A+P + G V PP Sbjct: 144 ASPPPAPTPPPPAPAPAAPTTMPPAAGLPPAPSPGTGAMPSGMPTFQGMAVATPPTPVIS 203 Query: 188 SVPVPNRI------------QRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVT 235 V + R Q + + ++P SF + +L+ G DA Sbjct: 204 RVTLAERRRPSAEGSGDGSHQAEGANQASNAPKTVSTFLPV-SFTRGILLGGLDAPTGGQ 262 Query: 236 GNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK-DGKT 294 + P+ +R++ +PN + CFV +GD+SSERA +RT N+SC++ DG T Sbjct: 263 SQANPHPVLIRLSDNSVLPNQFRGEYRECFVVAAGYGDISSERAYLRTENLSCVRADGAT 322 Query: 295 IDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP--AVGLGA 351 +++ I+G V GK G++G +V + G++L A AG V GIGQG+ A+ + LG Sbjct: 323 LEVRIQGSVYGEDGKVGMRGRLVTKQGQMLANALLAGVVSGIGQGLSTANTTYSSSPLGT 382 Query: 352 TAAYGAG-DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 A+ + D + G+G G KA L+ YYIK AE PVI + AG ++ VV G ++ Sbjct: 383 MASTDSNADAYRAGLGHGVGKALDRLAQYYIKLAENTFPVIEVDAGRQIDVVITKGVRID 442 Query: 411 TVEEMALERTQSRAEEDNPESPVPV 435 ER Q R Sbjct: 443 VPMTAVAERGQRRTASPETRYLETT 467 >UniRef50_Q2LTZ2 Pilus assembly protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ2_SYNAS Length = 397 Score = 261 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 43/420 (10%) Query: 8 VKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVR 67 +++ + L + V A ++ G L+ D V+ + K Sbjct: 15 RQKRNLVLLAMATVVLAFSLAGYLF-----------------KTRDGGTVLGKSAQKKK- 56 Query: 68 QHATTEMQVTAAQMQK-QYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGAN 126 E+ + A ++K Y E R+E+ ++ Q+ ++++ ++ A V A Sbjct: 57 -----EITLDAGLLEKSAYLEGRKEIARTEEKLSLLQKELDEIKEEKAKA---VHAGSKQ 108 Query: 127 PVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTY 186 P+ A P P P+ P P S P P A G+ + Sbjct: 109 PLPAV--PKPPDPSKAISYPVPPLPPPPVSSADPSKVGQASKPAAETTGD-------IEL 159 Query: 187 QSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLR 246 S P + +K + ++G S+ Y+P SF +A L+ G DA + + VP+ LR Sbjct: 160 VSNPQAQKQDQKAAEVKKNEKGDSV-YLPP-SFMEATLLSGLDAPTVESAKGNPVPVLLR 217 Query: 247 ITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL--KDGKTIDMPIKGH-V 303 I L +PN D GCFV E G+++ ERA +R N+SCL K ID IKG V Sbjct: 218 IKDLAILPNKVKADLKGCFVIAEGQGNLADERAHLRLVNLSCLSRKGQAVIDQKIKGFVV 277 Query: 304 SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPA--VGLGATAAYGAGDVL 361 GK G++G VV + G + + AGF G+G + A+ + LG T G + Sbjct: 278 DSDGKIGLRGTVVSKMGSAIARSVLAGFFGGVGDALRSATMTSSISALGTTQTVDPGQIA 337 Query: 362 KMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQ 421 + G+G G ++ A L +Y++ A+Q PVI +GA +T+V +G L+ E+ ++ + Sbjct: 338 QAGLGSGLAQGAHELQKFYLELAKQSMPVIEVGATRNITLVVSEGVDLEIKEKPGGKKQK 397 >UniRef50_B2I3Y9 TraB pilus assembly family protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Y9_ACIBC Length = 438 Score = 260 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 89/412 (21%), Positives = 168/412 (40%), Gaps = 12/412 (2%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 + + N +K+KQ WL I+ + ++ SG+ + P+ V+ Sbjct: 7 LENPNDKLKKKQIKWLAILGTIL------FIIVAIFLFSGSPPEETNKTQAPENAVNVEK 60 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 D + + + +KQ +++ + ++ Q + + + + + +A + Sbjct: 61 PGDAEEQDKWRQTAAIDQEAQKKQIDDLTQTVNSQVAQNDALKSELSIMNERISQIANRS 120 Query: 121 K-ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVT 179 + + A P + + + + + P G+ P P Sbjct: 121 ESRVVAQPTNTNPPNLGGIAGTSSAYPNKQGLHGQSILSDPNGTGIDPQTGERIPLPNNI 180 Query: 180 PPPQV--TYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGN 237 P + + T + ++ +IP GSF + ++I G DA Sbjct: 181 APVKTFGIIDMNKSIDEQGNTTSTSVKSQRPEKTTFIPDGSFVRVVMINGVDAPTGGQAQ 240 Query: 238 ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDM 297 +P+ + G +MPN+ + GC AWG++SSER ++ +C+ +G+T+ + Sbjct: 241 SDPIPVVFQTVGKFDMPNNYKMNIKGCRFVGAAWGELSSERVKATIQSGNCIINGQTVPI 300 Query: 298 PIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQ--GMERASQPAVGLGATAA 354 IKG V GK GI+G VV + G+IL A A ++ IG G + LG Sbjct: 301 QIKGQVVGEDGKTGIRGRVVSKQGQILAKAALASAMEAIGGLYGSTVGTASQSALGTVRT 360 Query: 355 YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDG 406 ++ + +GG S A+ LSD+Y++RA PVI + AG + +V Q G Sbjct: 361 ISGSELKQAAVGGAISGGAEKLSDFYMQRANDLFPVIEVSAGRTLEIVVQQG 412 >UniRef50_A4JTP2 TraB pilus assembly family protein n=2 Tax=Burkholderiales RepID=A4JTP2_BURVG Length = 405 Score = 257 bits (656), Expect = 6e-67, Method: Composition-based stats. Identities = 94/421 (22%), Positives = 182/421 (43%), Gaps = 30/421 (7%) Query: 2 ASINTIVKRK--QYLWLGIVVVGTASAIGGALYL-SDVDMSGNGETVAEQEPVPDMTGVV 58 ++ I+K+K + + + G + + S GN + P V Sbjct: 3 GNVKDILKKKWLELPPKTRTAIAIGALFAGLVAVGSIFVHPGNAPRKQKIAPT------V 56 Query: 59 DTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAE 118 K + + ++ + +I+ ELD N ++ ++I+++ ++A Sbjct: 57 SNLLLPKPKDQTSEQLAAANKATNDEVAKIKTELDKSNDEKAALLKKIDEMQSNSAHPDV 116 Query: 119 QVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGV 178 V A + A + + S + P + +P P+A + Sbjct: 117 GVNADMMKELMAMKSRLDDLEKSKANGK------------TPGLTDPLPLPSAGGKSDDD 164 Query: 179 TPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPS-LPYIPSGSFAKAMLIEGADANASVTGN 237 P + + K T+ KQ + Y+ +GS + +L+ G DA S Sbjct: 165 APVAAAQPEKPHLRVTTNTKAITKVAAKQDTTPAAYLTAGSMFEGILLNGMDAPTSSVAQ 224 Query: 238 ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD-GKTID 296 ++ VP +RI +PN+ +D CFV + +G +SSERA +RT +SC+ D GK ++ Sbjct: 225 KNPVPAVMRIKTDAILPNNYNHDVKECFVLVSGYGSLSSERAQLRTETLSCVGDGGKVLE 284 Query: 297 MPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAY 355 + G+ V G+ G +G +V + G+++ + AG + G + P + LG+ + Y Sbjct: 285 TKLDGYVVGEDGRVGARGRLVSKQGQLIAKSLAAGVLSGFSDALTPQQIPRLDLGSGSGY 344 Query: 356 ------GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 AG + + G+ G S AA++++ +Y+ A++ PV+ I AG ++T+V G +L Sbjct: 345 ISTERATAGTIAETGVAKGFSTAAKSVAAFYLDMAKEMTPVVEIDAGRKLTIVLIKGVEL 404 Query: 410 K 410 K Sbjct: 405 K 405 >UniRef50_B7XGQ7 Putative pilus assembly protein n=2 Tax=Pseudomonas RepID=B7XGQ7_PSEPU Length = 438 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 89/433 (20%), Positives = 158/433 (36%), Gaps = 31/433 (7%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 M +I +++ ++ +G I G + ++ + P + ++ Sbjct: 1 MKAIQQFLEKLTPRGKLMLAIGGTVLIVGTVVGVAMNAATPERKSRAAAK-PQVEAILTD 59 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNK--QRGDDQRRIEKLGQDNAALAE 118 + + Q+Q Q + R + K Q + Q ++ L Q+ + + Sbjct: 60 EDPRALGMDSIASQ---LRQLQAQQNRLERTMGQKEKDVQLKNTQEKVSGLEQELQLVQK 116 Query: 119 QVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGV 178 ++ +G +S P P V + A P Sbjct: 117 ELAKVGREKKGTGESEDNSSDSSASNQARSPIPPRESV----FVNKATSSPAELTDVYSN 172 Query: 179 TPPPQVT--------YQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADA 230 PP Q P I+ K K +P+GS ++L+ G DA Sbjct: 173 LPPEQPEDPKSRSSEKTEAPKIRVIKAKEDEGKSDKPEELSVTLPAGSILSSVLVTGMDA 232 Query: 231 NASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK 290 P +RI +PN D CF+ WGD+SSERA +R +SC++ Sbjct: 233 PTGKQAQRDPFPSLVRIKNEAILPNRFRADFRECFMIASGWGDLSSERAYMRAERLSCVR 292 Query: 291 -DGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVG 348 DG ++ I+ + GK G++G +V + G+I+ + GAGF+ GI P + Sbjct: 293 NDGSVLEASIEAYATGEDGKAGLRGRLVSKQGQIIARSLGAGFLQGIAGAFNVQKVPTIN 352 Query: 349 LGATA----AYGA-------GDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGN 397 + + + L+ GA A + ++D+Y++ AE PVI I A Sbjct: 353 VTRASDDGKTVAPVYEQAFDSNALQSAGFSGAGSALERIADFYLEMAESIFPVIEIDAMR 412 Query: 398 EVTVVFQDGFQLK 410 EV + G +K Sbjct: 413 EVDFIVNKGMTVK 425 >UniRef50_Q1MY41 TraB pilus assembly n=1 Tax=Bermanella marisrubri RepID=Q1MY41_9GAMM Length = 415 Score = 254 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 84/410 (20%), Positives = 165/410 (40%), Gaps = 24/410 (5%) Query: 5 NTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDD 64 N ++KQ +V +G + LY SD + + ++++ + D+ Sbjct: 16 NEDSRKKQIRNFSLVGIGLFLMVLLGLYYSDNQIKKDRQSLSAEIEEQRKK-------DN 68 Query: 65 KVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALG 124 ++ + +K + E VL ++ + R+++L + + Sbjct: 69 EILKRYKFNPSEVVKPEEKWMAKSETEFKVLKEENDSLKERLQRLEEMMEKGPDTSNNTD 128 Query: 125 ANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQV 184 + + T + P P P + + G P ++ Sbjct: 129 ESVIANTQQSTPVENDQPKVKLSSPLSVESVKASVADG--------VAEPSIKNKKSTEI 180 Query: 185 TYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQ 244 Y + +K + + Y+P+G+FAK +++ G DA + +P+ Sbjct: 181 GYVDLSPMGSSNQK-----DKVKKNIETYMPAGAFAKVLVLSGVDAPTGGMAESNPLPVI 235 Query: 245 LRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIKGHV 303 L++ +PN D C V A GD+++ER ++RT +SC+ +G I++PIKG++ Sbjct: 236 LKVLDSAILPNFFDSDIRNCHVVGAATGDLAAERVMIRTEVLSCVLANGDIIEVPIKGYI 295 Query: 304 -SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQ--PAVGLGATAAYGAGDV 360 GKNG +G VV + G +L + AG G+ + Q LG + V Sbjct: 296 AGEDGKNGFRGRVVSKQGAVLAKSLFAGVASGLSNSINSQYQQIQTSALGTVTSIDPDKV 355 Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 + G GA+ + ++D+Y KRA + +P+I + +V G +L+ Sbjct: 356 AESGAAQGATTTLEKIADFYFKRANEIYPIIEMAPNRIGELVIIKGAKLE 405 >UniRef50_C1SHE3 TraB pilus assembly protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHE3_9BACT Length = 391 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 100/358 (27%), Positives = 154/358 (43%), Gaps = 25/358 (6%) Query: 65 KVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAAL---AEQVK 121 K R A V A + + L ++K+ GD +R+E+L A L + + Sbjct: 42 KKRPAAVQRTTVNAKNFSAKEDRNTSLLLGIDKKFGDVLKRVEELENRKADLSFNNQPYQ 101 Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPP 181 A + V A GE Q + G PQ N P+ + P T Sbjct: 102 AQEPDKVIAAGETDFQKSVNSGGMR-YPQEENNLEFDKPKDKKSRPTETII--------- 151 Query: 182 PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTV 241 + Y S+ VP ++K N K + Y+PS S KA+L+ G A S G + Sbjct: 152 SGIDYISISVPQETEQK--KSNPAK----VNYVPSNSIFKAVLLTGVYAKTSTQGKSNPT 205 Query: 242 PMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGK--TIDMPI 299 P+ R+T L PN + GC+VG EA ++S ER R + SC+ + +D+P+ Sbjct: 206 PVIFRLTDLSFFPNEVRRNLAGCYVGGEAHAELSDERVHTRLTSFSCITSDRRQVVDIPV 265 Query: 300 KGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA-SQPAVGLGAT--AAY 355 G V G GI G+V+ + L A +GF++G +G A S V + T Y Sbjct: 266 TGRVQGGDGSVGIAGKVISKQEAALLLAGVSGFIEGGAEGFSAANSTQNVNVFGTSEQTY 325 Query: 356 GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 + + IG G K+A L+D++ ++ PVI G EV ++ GF L+ E Sbjct: 326 TDDQIARNAIGKGVGKSAGVLTDFFEDLLQEIKPVIHAQGGQEVELIISKGFSLEMEE 383 >UniRef50_Q5NX52 Sex pilus assembly protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX52_AZOSE Length = 420 Score = 251 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 105/428 (24%), Positives = 185/428 (43%), Gaps = 29/428 (6%) Query: 4 INTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQE-------------P 50 ++ K ++ + + + L+ V S G T P Sbjct: 1 MSLKEKWQELPSNARLGIMVGGIFVSVIALAAVVQSTRGPTREIAGQPIGANRPANFRVP 60 Query: 51 VPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLG 110 TGV D + + +T M +M+ + + R+L + +G + ++ L Sbjct: 61 TARETGVDDLAAKLESIEKSTVGMDNRVKKMEADRQLLFRQLQEMRGTQGSNGVTVD-LV 119 Query: 111 QDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPT 170 + L+ +++ L + A + + P E +P + S A+P P+ Sbjct: 120 DEVQRLSRELERLKFSGGGAVAQGLVGPDGLPVVGEDG-KPLSADNPADAFSSGALPQPS 178 Query: 171 AFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADA 230 PPP + P ++ + + Y+P GS + L+ G D Sbjct: 179 VSAAPVFAPPPPTLRVVGAATPKEEKKTKDDK------ERIAYLPMGSQFEGFLLNGMDV 232 Query: 231 NASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK 290 S ++ VP LR+ +PN T+D CFV + +GD+SSERA++RT SC+K Sbjct: 233 PTSNAKSKDPVPAVLRVKTDAILPNHFTHDVRECFVIISGFGDLSSERAVMRTEGFSCIK 292 Query: 291 -DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP--- 345 DG I+ P++G+ V G+ GIKGE+V + G+++ + AGF+ GI +G++ P Sbjct: 293 DDGAVIEGPMEGYVVGDDGRVGIKGELVSKQGQMIARSLTAGFLGGIAKGLQPWGTPDQW 352 Query: 346 ---AVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVV 402 +G + GDVL G GAS AA ++++Y++ A + PV+ I A T+V Sbjct: 353 ANTQTSVGQAERFEMGDVLTAGAMSGASSAANQVANFYLEMAREMFPVVEIDAARRATIV 412 Query: 403 FQDGFQLK 410 G ++K Sbjct: 413 LTKGLEVK 420 >UniRef50_C1MEJ9 Pilus biogenesis protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MEJ9_9ENTR Length = 465 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 105/464 (22%), Positives = 175/464 (37%), Gaps = 52/464 (11%) Query: 5 NTIVKRKQYL-WLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFD 63 + K K+++ W G+ L + S + A QE V + V+ Sbjct: 11 SISAKHKKWVIWAGVTTFAI------LFLLLVIPDSAGPRSRAPQEKV--IASVLTDGDT 62 Query: 64 DKVRQHATTEMQVTAAQMQKQYEEIRREL------DVLNKQRGDDQRRIEKLGQDNAALA 117 + V Q+A + K ++ + L D ++ + + +K G + AA+ Sbjct: 63 NGVSQNAIAARIRALDKTIKDQGQLIKALTEKYGADQTAQRLSNLENGQKKSGAEVAAIK 122 Query: 118 EQVKALGANPVTATGEPVPQMPASPPG---------PEGEPQPGNTPVSFPPQGSVA--- 165 ++V +NPV + +P P + G PE P TP + + Sbjct: 123 KRVDT-VSNPVPYSQQPRGATPLAGNGQRNVPTLYKPEEISAPSVTPRNSGSFNNGKTLQ 181 Query: 166 ----------VPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVF---TRNEGKQGPSLP 212 VP P A V Q P +Q + +E + Sbjct: 182 RVYEDAAPPVVPEPAANQRQQKGKDGKAVPSQITPEIITVQEDIEAAPVADEDDNPENQT 241 Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 Y+P+ S +LI G DA S + P R+ +PN D C + +G Sbjct: 242 YLPATSIISTVLIAGMDAPTSRDARKDPYPALARVKKDAILPNRFRADIRECGMLAAGFG 301 Query: 273 DVSSERAIVRTRNISCLK-DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAG 330 D+SSERA R+ I+C++ DG + P+ + V GK+G++G +V + G+ L A AG Sbjct: 302 DLSSERAYFRSEVITCIRDDGAVFEAPLVAYAVGEDGKSGVRGRLVTKQGQYLARALTAG 361 Query: 331 FVDGIGQGMERASQPAVGL------GATAAYG---AGDVLKMGIGGGASKAAQTLSDYYI 381 F+ Q S P + + + Y + D L+ G A L+D+Y+ Sbjct: 362 FLQAASQLFNVQSIPTISIKRDGDSSDSTPYQQVMSSDALQGAAVSGVGGALNRLADFYM 421 Query: 382 KRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAE 425 + A PVI I G V + Q G LK + +T + Sbjct: 422 QMAGDLFPVIEIDPGRSVDFIVQKGVMLKFTRVTSKTQTVGGKK 465 >UniRef50_D2U0R2 Conjugative transfer pilus assembly protein TraB n=1 Tax=Arsenophonus nasoniae RepID=D2U0R2_9ENTR Length = 434 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 76/405 (18%), Positives = 147/405 (36%), Gaps = 31/405 (7%) Query: 30 ALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIR 89 ALY + E E T ++ + V Q + +++++ ++ Sbjct: 30 ALYFFTSVPDQSYEVKKENSKP--TTNLITSGDTQGVSQESIAA---DLRRIEEELIAVK 84 Query: 90 RELDVLNKQRGDDQRRIEKLGQDNAALAEQV--KALGANPVTATGEPVPQMPASPPGPEG 147 ++ + K+ + ++ +L QDN L Q+ + + P + Sbjct: 85 QQRETDQKEISELNKKQTQLSQDNNDLRFQIKNQQPTYQITPKVTKNTPNAYENELQKIY 144 Query: 148 EP-------------QPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNR 194 + G + P + G + + ++ Sbjct: 145 QNNDLPYSNNHVQNGDRGKDETKSDTFANEESYPEIMRFDGVASDGAEKGGALGESLNSK 204 Query: 195 IQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMP 254 + N + Y+P+ S + + G DA + E+ PM LR+ +P Sbjct: 205 KESDKPKIN-NDEAIEGTYLPASSIIPTVALSGMDAPTAKQARENPYPMLLRVKKDAILP 263 Query: 255 NSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK-DGKTIDMPIKGH-VSFRGKNGIK 312 N+ + D C + +G++SSERA +R+ I+C++ DG + V GK GI+ Sbjct: 264 NNFSADIKECGILAVGYGELSSERAYLRSNTITCIRDDGAVFEAAFDSFAVGEDGKAGIR 323 Query: 313 GEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGAT------AAYG--AGDVLKMG 364 G +V + G+ L A AGF+ + P + LG + Y + L+ Sbjct: 324 GRLVTKQGQYLAKALIAGFLQAGAEMFSVQQLPTITLGRVGDDKVNSPYQQINSNKLQGA 383 Query: 365 IGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 G A L+D+Y+ A+ PVI I + ++ G +L Sbjct: 384 AMKGVGGALNRLADFYMDMAQDLFPVIEIDPARSIDLIVTKGVKL 428 >UniRef50_C3NU45 IncF plasmid conjugative transfer pilus assembly protein TraB n=16 Tax=Gammaproteobacteria RepID=C3NU45_VIBCJ Length = 430 Score = 248 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 84/402 (20%), Positives = 149/402 (37%), Gaps = 13/402 (3%) Query: 21 VGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQ 80 + A GG + + V + + + + ++ T V + ++ Sbjct: 17 LSVAGIAGGLILMVMVFSPNPDDGASSRNRQETIRHILTDTNTRDVGVDSLAANVKLLSE 76 Query: 81 MQKQYEEIRRELDV---LNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQ 137 +Q L + ++ + A L ++ + A +A + Sbjct: 77 RNEQLRREVERLRRDVDSGRLSPGSPSIPSEVNAELARLRAELDDVRAGGDSAVEGTNSR 136 Query: 138 MPASPPGPEGEPQPGNTPVSFPP-QGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQ 196 E + P + + +P P NG + I+ Sbjct: 137 FEVPLSAMELPKEEKPLPSNPDDYFANAPLPDPLYQQTANGQGARARDVPLPPITIRMIE 196 Query: 197 RKVFTRNEGKQGPSLP-YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPN 255 +V E + P Y+P+GS LI G DA + P LRI +PN Sbjct: 197 PEVVAEPEVVVQEAPPLYLPAGSIISGTLITGLDAPTHESARREPFPALLRIQKEAILPN 256 Query: 256 SKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK-DGKTIDMPIKGH-VSFRGKNGIKG 313 D CF+ +GD+SSERA +R ISC++ DG I+ + + V GK GI+G Sbjct: 257 RFRADIKECFLIAAGYGDLSSERAYLRGETISCVREDGGVIETRLDSYAVGEDGKAGIRG 316 Query: 314 EVVMRNGKILGWAWGAGFVDGIGQGMERASQPAV---GLGATAAYG---AGDVLKMGIGG 367 +V + G+++ + AGF+ G+ + P + G T Y + + L+ Sbjct: 317 RLVSKQGQLVAKSMMAGFLQGLAGAFDVNPVPTIQTGNAGDTQLYQQVMSQEALQGAAIK 376 Query: 368 GASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 G KA ++ +Y+ AE PVI + A ++ V+ G L Sbjct: 377 GTGKALDRVAKFYLDMAENMFPVIEVDAARKIEVIVTRGASL 418 >UniRef50_A3VN24 Putative conjugative transfer factor, TraB n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN24_9PROT Length = 418 Score = 247 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 111/424 (26%), Positives = 181/424 (42%), Gaps = 29/424 (6%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 M+ N +Q L + +A ++ D + + MT V++ Sbjct: 1 MSEENKKRLTRQRLLMYGAGAAAVAAASVWIFSGDGADNQTRAEDLRRRKA--MTDVINP 58 Query: 61 T--FDDKVRQH--ATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAAL 116 DD + + ++ ++++ ++ L + + + ++K D AA+ Sbjct: 59 PGMADDFLSETGTRLAAVEGAISRLEADNTSLKEALRSRDLELAATRADLQKTRDDAAAM 118 Query: 117 AEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGN 176 E + A+ T T EP +P S P G+P S A P P + P Sbjct: 119 VEDMAGRVASVSTRT-EPALGLPTSEPSAIGDPFGRRG-----VLPSGAAPQPLSVEP-- 170 Query: 177 GVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTG 236 V P Q + +V + Y+P ++A A ++ G D + V Sbjct: 171 -VIPRTVQVLQFAAATEALDTRVLEPAVFRLDEG-DYVPPNAYAPAHVLVGVDMSTGVRL 228 Query: 237 NESTVPMQLRITGLV--EMPNSKT--YDATGCFVGLEAWGDVSSERAIVRTRNISCLK-D 291 + P+ LRITG + N + D TGC V A ++SSER V+ + I+C + D Sbjct: 229 SADPKPVLLRITGPARSVLQNGRQLDVDLTGCLVNGAAHAELSSERVYVKLQKITCDRGD 288 Query: 292 GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGA 351 G+ + P++G+++ GK G++G VV R G I+ A AG V G G+G+ R + G Sbjct: 289 GEVAESPVEGYIAQLGKVGVRGRVVSREGDIVSKALVAGVVGGFGRGIARNTDQIFAAGT 348 Query: 352 TAA--------YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVF 403 AG++ G G G + AA T+SDY I RAEQY PVI + G +V +VF Sbjct: 349 AGGSTIIGQDNLSAGEIAAGGFGEGLATAADTVSDYLIDRAEQYQPVIEMPTGIDVEIVF 408 Query: 404 QDGF 407 GF Sbjct: 409 LSGF 412 >UniRef50_B4EQI2 Putative TraB conjugative transfer protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EQI2_BURCJ Length = 477 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 100/442 (22%), Positives = 167/442 (37%), Gaps = 34/442 (7%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTT 61 A N +K +Q + + + +V +A G L+LS D + + E + + D Sbjct: 11 AGTNDRIKSRQRVIMIVAMVLILAATGVGLFLSG-DATPTAKPKPVVETIQPPGSISDRD 69 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVK 121 +++ ++ + + +D + + AA A Sbjct: 70 AWRGQSDAKLLDLEQRVQRVAAEQATAKAAIDKVASDVAGQKAAEASAAASAAAAASAAA 129 Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNT--PVSFPPQGSVAVPPPTAFY------ 173 A A T + + P P G G V PP + A+ P Sbjct: 130 AASAPSGTTSATTASPATLNKPLPVGTTGRGLGGKRVLTPPGDNTALNTPIGEGMPVSNE 189 Query: 174 ---------------PGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGP-------SL 211 ++ Q PV R +R T + + Sbjct: 190 LEIIDFDDSTDAGGVGAGPGGTGGKLEVQGFPVDARARRYKMTTSTNGGAAGGAGGKGDV 249 Query: 212 PYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAW 271 +P+GSF ++ G DA + + L +PN K+ D GC + AW Sbjct: 250 NLLPAGSFIPVAMLNGVDAPTGGQAQSDPLSVDLEAIKPANLPNGKSLDVRGCRIVSSAW 309 Query: 272 GDVSSERAIVRTRNISCLKDGKTIDMPIKG-HVSFRGKNGIKGEVVMRNGKILGWAWGAG 330 GD+S+ER + RT+ +SC+ G I++ IKG + GK G++G +V + G++L A AG Sbjct: 310 GDLSAERMMGRTQILSCIIAGHPIELEIKGKLIGEDGKEGVRGRLVTKQGQVLANAILAG 369 Query: 331 FVDGIGQGMERASQPAV--GLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYH 388 + GIGQ ++++ G G G V + IGGG A Q L+ YY+K A++ Sbjct: 370 SLGGIGQAFQQSATVTSFGGGGVAQTIDGGQVGRAAIGGGVGTAGQMLAQYYLKAADKLF 429 Query: 389 PVIPIGAGNEVTVVFQDGFQLK 410 PVI A + V G + Sbjct: 430 PVIETDATRTIEVSITKGVYVD 451 >UniRef50_C0QUX1 TraB pilus assembly family protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QUX1_PERMH Length = 416 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 79/424 (18%), Positives = 164/424 (38%), Gaps = 42/424 (9%) Query: 10 RKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQH 69 +K+ + LG + G + + + + + + + +V + +P + + ++ + Sbjct: 29 KKRMVILGAITAGISLFVIFSFFSNVIFGLADNTSVPQYQPKKEGEKTIAPKVEE-DWKA 87 Query: 70 ATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVT 129 + + +++ L + + +++ Q+ L E+++ V Sbjct: 88 I----------TEMKINQLQERLQRMEDTNKQILQLLQEQKQEREMLREEIEREIEERVK 137 Query: 130 ATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSV 189 T P P P G P ++ Sbjct: 138 TT-----------------PSASVPPPPPQTPVQYGQPQGQQGQQGQQQKAPALKEFKPD 180 Query: 190 PVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITG 249 +++V + ++ +P G F K + + G DA G + P+ + Sbjct: 181 KEEETDKKEVSKTEKKEKKAVKIKLPLG-FLKGLTLTGLDAPTFQYGQNNPHPVLIVSLS 239 Query: 250 LVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIKGHV-SFRG 307 + N+K + CF +G++SSERA +R +SC+ K G ++ + G V G Sbjct: 240 KQIIANNKKLNLKECFFLGSGFGEISSERAYIRLVKLSCIDKKGNVLEQKVAGWVLDDDG 299 Query: 308 KNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP--AVGLGATAAYGAGDVLKMGI 365 K G++G VV + G +L + AG ++G+ + + S +G T D K+ + Sbjct: 300 KVGLRGRVVSKQGAVLAKTFMAGLLEGLSRTIAATSTTIQISPVGTTQTLNPQDATKVAL 359 Query: 366 GGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAE 425 G AA L+ +Y+K AEQ +PV+ + G ++T++ G +LE+T+ Sbjct: 360 ASGFQSAASRLAQFYMKIAEQMYPVVEVSPGRKITILISGG---------SLEKTKDNKL 410 Query: 426 EDNP 429 NP Sbjct: 411 ISNP 414 >UniRef50_Q5ZTS2 Putative conjugative transfer protein TraB n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS2_LEGPH Length = 439 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 100/446 (22%), Positives = 175/446 (39%), Gaps = 38/446 (8%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSG----NGETVAEQEPVPDMTG 56 +A+++ +K++Q ++LGIV+ I L + + P T Sbjct: 9 LANMSIQLKKQQQIFLGIVIGVIVLVIACFALLGNKTVKSREVDKPAYKKHSLASPISTA 68 Query: 57 VVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAAL 116 ++ + +K + E+ + K + + E D +K + + ++ + L Sbjct: 69 TNESHWIEKTQNAWRAEL-AKSELFDKNLKALGDEKDKQSKLITSQKDELSEMKSTLSEL 127 Query: 117 AEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGN 176 Q+ L T + EPQ G P + S ++ Sbjct: 128 KHQIVKLQMERTTPIDGTLK---------NNEPQNGLLPRADEAAASNSM---------- 168 Query: 177 GVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTG 236 + Y + K+ +++ + Y+ S +FAKA++++GADA+A V Sbjct: 169 -EMDSGFIQYTA---------KLNKKSKPRIKTPNNYVFSNTFAKAVVLQGADASAGVLS 218 Query: 237 NESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK-DGKTI 295 + M +I MPN GC V GD+SSER RT +SC+ +G I Sbjct: 219 QANPDIMIFQIVDDGVMPNKYRAPLKGCMVSASVIGDISSERGKFRTERLSCIHSNGTNI 278 Query: 296 DMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQ--PAVGLGATA 353 D+ + G +S KNGI+G V R+ ++ A+ F + +G ++ S LG+ + Sbjct: 279 DIQVTGIIS-DSKNGIRGRAVWRDEPMVKKAFWGNFWESMGNIGQQYSTDYSTSPLGSVS 337 Query: 354 AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 AG + + G S AA+ + Y IKRAE YHP+I + V V F GF L Sbjct: 338 TIQAGKIPLAAVSSGGSGAAKMYAQYNIKRAEMYHPIIQLPPIVTVDVTFLKGFWLDGGT 397 Query: 414 EMALERTQSRAEEDNPESPVPVPPSA 439 + ++ P Sbjct: 398 DTNAPEQPEESQNSKVAFEAPAESET 423 >UniRef50_B7J829 Conjugal transfer protein, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J829_ACIF2 Length = 543 Score = 238 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 89/431 (20%), Positives = 166/431 (38%), Gaps = 32/431 (7%) Query: 37 DMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLN 96 S + + Q+ + +T ++ K Q + Q++ + K+ +E ++ L Sbjct: 75 PQSLQAQIASTQKQLKSLTKIIAEENGVKSSQMKDLKGQMSQEVL-KEIQENEKK-HALQ 132 Query: 97 KQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEG--------- 147 Q Q++I L Q+ L + + N V P P MP + P Sbjct: 133 LQNPATQKQIAALTQEIKTLKAEKQQPVYNQVAPGVAPAPSMPVNTWSPAQPIEILGEGG 192 Query: 148 -EPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP--PPQVTYQSVPVPNRIQRKVFTRNE 204 P ++ P ++ P P P V+Y ++ V N+ Sbjct: 193 VASSPSTNGIAPPTAPAIPGTPGAHGVPTAPAIAGRRPTVSYHQPKTLKQLGGTVKVSNK 252 Query: 205 GKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGC 264 + Y+P+ + +LI G A + + +RI +PN + C Sbjct: 253 K----TGIYLPASTILTGVLINGVIAGTGPDSKHNPQIVDIRIKKKAILPNGLRINLENC 308 Query: 265 FVGLEAWGDVSSERAIVRTRNISCLKD--GKTIDMPIKGH-VSFRGKNGIKGEVVMRNGK 321 V +G ++ R +RT +SC+ G I PI + VS G G+ G+V+ G Sbjct: 309 EVLASGYGSMNERRVFMRTDTLSCVNRRTGNVISAPIHAYVVSSGGHGGVPGKVISHQGP 368 Query: 322 ILGWAWGAGFVDGIGQGMERASQPAVGL----GATAAYGAGDVLKMG---IGGGASKAAQ 374 + ++ +G G+G ++ ++ L G+ +Y + MG + GG S A Sbjct: 369 AMLKSFLSGIFSGLGNAIQPNQVDSLSLNPQSGSAQSYQMPSLGYMGGSALAGGISTPAG 428 Query: 375 TLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL----KTVEEMALERTQSRAEEDNPE 430 +S +Y+ AE P I + G V+++ + G ++ +T ++A + QS + N Sbjct: 429 EISKFYLHEAESELPTIEVNPGVSVSMIIETGVRVHVHGETKGQLAEAQYQSASSISNSP 488 Query: 431 SPVPVPPSAES 441 P ES Sbjct: 489 QGGPALTPGES 499 >UniRef50_D0SGY7 TraB pilus assembly family protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY7_ACIJO Length = 440 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 95/433 (21%), Positives = 170/433 (39%), Gaps = 18/433 (4%) Query: 3 SINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVD--MSGNGETVAEQEPVPDMTGVVDT 60 + N K+KQ + + + + G+L+ D + + AE + G+ D Sbjct: 8 NPNEQRKKKQLTIIVVGAILLIVVVVGSLFFLGEDPAQKQSPQAKAEDVKLTPPGGIDDN 67 Query: 61 TFDDKVRQHATTEMQVTAAQMQK-------QYEEIRRELDVLNKQRGDDQRRIEKLGQDN 113 A ++ + ++ +LD +N++ + +R + Sbjct: 68 AAWRTGAAQDLAATNERLANLETVQSNKDSEINTLKSQLDEMNQRVQEAERIANNASRTP 127 Query: 114 AALAEQVKA-LGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAF 172 A+ +N +A G +P G P + V P G V P A Sbjct: 128 RLPAQPTNTNPPSNTSSAFGANLPPNRQGLHGDSILSDPMGSTV-NPATGQVIPLPSNAR 186 Query: 173 YPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANA 232 G + + + K+ +IP GSF + +++ G DA Sbjct: 187 GNGTAPRQAALIDLTTNDNGRGGSVASTQQAAKKE----TFIPDGSFVRVVMVTGIDAPT 242 Query: 233 SVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDG 292 +P+ G ++MPNS + GC AWG +S+ER R + SC+ +G Sbjct: 243 GGAAQNDPLPVLFETVGKLDMPNSYKMNIKGCRFLGYAWGSLSTERVNARIESGSCIVNG 302 Query: 293 KTIDMPIKG-HVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAV--GL 349 KT+ + +KG + GK GI+G+VV + G+ L A A ++ IG + L Sbjct: 303 KTVKINVKGNLIGEDGKPGIRGKVVSKQGQALSAAALASALEAIGGLYSSTTGTTTMGAL 362 Query: 350 GATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 G DV +GG S AA+ LSD+Y++RAE+ P++ + AG V ++ G + Sbjct: 363 GVQRTVSGEDVRNSAVGGAISGAAEKLSDFYLRRAEELFPIVEVHAGRAVEILITKGAVV 422 Query: 410 KTVEEMALERTQS 422 + + ++ Sbjct: 423 EGLNIQGSSNSKR 435 >UniRef50_Q6MBA0 Putative F pilus assembly protein traB n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBA0_PARUW Length = 408 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 87/368 (23%), Positives = 149/368 (40%), Gaps = 15/368 (4%) Query: 64 DKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKAL 123 K + E + +K+ E+++ L +L K+ Q R E+L A ++ + Sbjct: 52 QKYYEETLLEYKERERANEKEKIELKQYLTLLKKKMEASQVREEELKNKKDTSALEIASS 111 Query: 124 GANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQ 183 N + PP P + F QG++A A P Sbjct: 112 SKNTFDRPVFEQAEESLLPPSSYRFPSSSFSSDPFVSQGTIASFGQEAVKATETAALRPP 171 Query: 184 VTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPM 243 + ++P + + + P+ +A+L+ DA + +P+ Sbjct: 172 LCEYTLPQEAKNELFSLEKRT----------PANVSVRAILLSSVDAVCRLDAQSDPIPV 221 Query: 244 QLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK-DGKTIDMPIKGH 302 +LR+ +P GC +G A+GD+SSER +R N++ + G+ I+ + G+ Sbjct: 222 KLRLLDDAHLPGGMKVKLKGCLIGASAYGDISSERVYMRLENLTQVNLSGQAIETEVTGY 281 Query: 303 VSF-RGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA-SQPAVGLGATAAYGAGDV 360 VS G+ G++G +V R+ KIL A G+G + GI Q ++ A ++P+ Y Sbjct: 282 VSGEDGRFGMRGILVDRSAKILKPALGSGILSGIAQTLQSACARPSKE--TINTYSLSSD 339 Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT 420 S A L+ YYIKRAEQ PV+ I AG V V F GF + + + Sbjct: 340 FAQNTVAKTSDAFSLLASYYIKRAEQVQPVLQIDAGRLVDVTFTQGFSMGDLHAKENLKQ 399 Query: 421 QSRAEEDN 428 + Sbjct: 400 IRNKHRPS 407 >UniRef50_B3EB62 TraB pilus assembly family protein n=3 Tax=Proteobacteria RepID=B3EB62_GEOLS Length = 422 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 101/422 (23%), Positives = 170/422 (40%), Gaps = 33/422 (7%) Query: 8 VKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVR 67 +R+ +W I+ A+ Y + ++ + + Sbjct: 15 SQRRNLVW--IMTGCILVAVFTIGYYVMNKGKDPALNKSVKQTPLSIEP-------KLLE 65 Query: 68 QHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANP 127 + E Q A+ + E+ ++LD + + EK G A Q+ A P Sbjct: 66 KSQFLESQKEIAKRDDKVAELTKKLDEITR---------EKKGDPTTAPVAQIGTAPAVP 116 Query: 128 VTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGS-VAVPPPTAFYPG--------NGV 178 + Q+ + G + P+ PQGS +++PPP A G Sbjct: 117 GDNHAQQQGQLQKTGSGRTAISKQPLPPIPPMPQGSSISLPPPPATAQGIAAGQLQSPTE 176 Query: 179 TPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNE 238 T + S P + + + G Y+P SF +A L+ G DA + Sbjct: 177 TEIGDIAIVSSPGSGKSAKADVDDKKKDVGTVQVYLPP-SFMEATLLSGLDAPTTSEAKG 235 Query: 239 STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL--KDGKTID 296 + VP+ LR+ +PNS + GCFV + G++++ERA + ++SCL K +D Sbjct: 236 NPVPVLLRVKTPAVLPNSVKANLKGCFVIADGKGNLATERAELLLVSLSCLDRKGQAVVD 295 Query: 297 MPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP--AVGLGATA 353 IKG V GK G++G VV + G ++ + AGF G G ++ A+ LG T Sbjct: 296 QKIKGFVVDEDGKIGLRGRVVAKMGSMIARSMLAGFFGGAGDAIKSAATTMSVSPLGTTQ 355 Query: 354 AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 D+ G+G G S + + +Y++ A Q PVI +GA VT+V +G L + Sbjct: 356 TVDPKDIAMSGLGSGLSSGFKEIQKFYMELARQTMPVIEVGATKPVTLVISEGINLDIKK 415 Query: 414 EM 415 Sbjct: 416 IA 417 >UniRef50_Q5WSC0 Putative uncharacterized protein n=2 Tax=Legionella RepID=Q5WSC0_LEGPA Length = 484 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 86/446 (19%), Positives = 172/446 (38%), Gaps = 39/446 (8%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTT 61 A++N K +Q ++ G LY S ++ P GV+D+ Sbjct: 15 ANLNQSAKMEQLRNGLAFLLLGGLCYGFYLY------SSKPQSTLPTNKKPVFDGVLDSA 68 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVK 121 F + + Q ++ E+ ++ + + + L +N AL Sbjct: 69 FSKLSDEAVLEKQQRQIDALKALVEKNKK----------NTPNKSDDLVSENQAL----- 113 Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPT--AFYPGNGVT 179 ++A + + Q+ G+ Q S +VA PPT + Sbjct: 114 ------LSAMQKQLEQLALENKEINGKLQVALLKNSQTSLAAVAPRPPTREEIEARHKQR 167 Query: 180 PPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNES 239 + Y + + R + ++ Y+ +G+ A+ +L+ GA +A + G ++ Sbjct: 168 ILDEKAYYGKAGLETVHFN-YRRQQKEERTPDNYVWAGTHAEGILLSGAKGDAGINGAKN 226 Query: 240 TVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPI 299 +R+ MPN++ GC + +GD+S + ++ +SC K + + + Sbjct: 227 MGTALIRLDSNGIMPNNRHSRLNGCLAIVSTYGDLSDDAVVMHLETLSCAKPNLSFEQKV 286 Query: 300 KGHVSF-RGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAV---GLGATAAY 355 G V ++G +++ +L ++ AG + G G G++ + G G Y Sbjct: 287 YGAVYDLDAMQDLRGTSILKTKPLLEYSAAAGILAGFGDGLKNLNTAQTINPGAGTITTY 346 Query: 356 -GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 A +++ GG S A +SDY +K A+ YHP++ AG V+++F GF + Sbjct: 347 GQASTLMQSAAGGAVSNPANKISDYIMKIADIYHPLVVARAGRRVSIMFTKGFWID---- 402 Query: 415 MALERTQSRAEEDNPESPVPVPPSAE 440 A + +S DN + + Sbjct: 403 RAHQSFESGKSIDNQSAQNEAAITTT 428 >UniRef50_C4K0M3 F pilus assembly protein TraB n=13 Tax=Rickettsieae RepID=C4K0M3_RICPU Length = 472 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 78/357 (21%), Positives = 127/357 (35%), Gaps = 21/357 (5%) Query: 69 HATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPV 128 T + + + ++ I + +D K + ++ + L E N Sbjct: 61 EVKTSLDLQEERQAREISGIEKAIDPRAKWTAEILNEVKNMQNHLEKLIE-------NKY 113 Query: 129 TATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQS 188 T + E N + Sbjct: 114 LETKTNIDDFSQKLESLE------NPREETILYDGNDFNNNQKIEDLLDNNVEQSIAAAP 167 Query: 189 VPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRIT 248 + R+ V + G + YI +GSFA+ +L+ G S P+ +R+ Sbjct: 168 TALVKRLLGYVKRADLGVKKDVKDYITTGSFARGLLLTGVVVGTGTNNAASPEPIMIRLV 227 Query: 249 GLVEMPNSKTYD-ATGCFVGLEAWGDVSSERAIVRTRNISCLKD-GKTIDMPIKGH-VSF 305 + + GD+SSERA R +S L GK I+ ++G + Sbjct: 228 DTAIFSKGYKTEQIKEAILIGSCTGDISSERAKCRLETVSLLNSHGKIIEKSVEGWLIGE 287 Query: 306 RGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVG-----LGATAAYGAGDV 360 G+ GIKG VV R+ + A G + GI Q + + ++ G A D Sbjct: 288 DGRPGIKGIVVDRSSDVARMAVLNGVLGGIAQFFQNQATNSIFPVSPITGQQNALKVQDS 347 Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMAL 417 LK G+ G A L+D+ IKRAE PVI + +G + VVF+ GF L+ +E A Sbjct: 348 LKAGVYAGTGNALAKLADFAIKRAESMSPVIVVASGRVIDVVFRKGFDLREDKEAAK 404 >UniRef50_A0L342 TraB pilus assembly family protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L342_SHESA Length = 452 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 87/400 (21%), Positives = 161/400 (40%), Gaps = 45/400 (11%) Query: 40 GNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQM-----QKQYEEIRRELDV 94 +G+ +A ++ + + +D + ++ + QV QM QK+ E I ++ + Sbjct: 72 TSGQLIAMRKKIQEREKAIDAQYTEQKASEKRIQQQVDTLQMSQLESQKRLETIAHQMQM 131 Query: 95 LNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNT 154 L +E+ ++ A + V A GA P E + Q S P E P + Sbjct: 132 L----------VEQQSKNAATARDSVSAKGARP-----ENIAQQAPSLPSTEFSLDPMAS 176 Query: 155 PVSF---PPQGSVAVPPPTA-------------FYPGNGVTPPPQVTYQSVPVPNRIQRK 198 S P S + GN T QV ++ ++ Sbjct: 177 LKSNVAMTPPASKTLTMNRGDVSLGKAAATGDEANVGNASTAKNQVAAKAKQAISQENTG 236 Query: 199 VFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKT 258 + E + ++ +G+ +L+ G S + + P+ L+I + MPN T Sbjct: 237 SIKKTEKEP---ETWLSAGTVIPTVLLTGQHVPTSSSAQSNPAPVLLKIVDVGVMPNGFT 293 Query: 259 YDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIKGHVSF-RGKNGIKGEVV 316 D GC V A G S+ R +R +ISC+ + G+ I+ P V G +GI ++V Sbjct: 294 IDLVGCTVIGAARGSASTRRVEIRAESISCIDQRGRAIEQPFIAAVQGQDGHSGIPAKLV 353 Query: 317 MRNGKILGWAWGAGFVDGIGQGMERASQPAVG--LGATAAYGAGDVLKMGIGGGASKAAQ 374 G+++ ++ AG Q + +A+ V + Y + + GG+S A Sbjct: 354 TLYGEVVKQSFWAGIYGTGAQTLTQAATNRVSGDVVYDGTY-FKNTATSSLAGGSSTAFD 412 Query: 375 TLSDYYIKRAEQYHPVIPIGAGNE-VTVVFQDGFQLKTVE 413 ++D+Y++ A++ P + + G E V ++ Q G LK Sbjct: 413 KIADFYLQLADEARPYLEMHGGIEGVDLIVQRGVSLKYKG 452 >UniRef50_B0RL09 TraB pilus assembly family protein n=2 Tax=Yersinia RepID=B0RL09_YEREN Length = 416 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 89/397 (22%), Positives = 153/397 (38%), Gaps = 30/397 (7%) Query: 25 SAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTA--AQMQ 82 I + + +G+ +P+P + V DT D ++ ++Q + + Sbjct: 38 GTIASFIIIIFGFYYASGKAETVNKPIPKTSVVADTAEDKLLKDDVVAQLQGDIKDSNAK 97 Query: 83 KQYEEIRRELDVLNK-QRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPAS 141 + ++ D++NK + L + N + ++ LG+ TG PV S Sbjct: 98 ITDDVAKKIQDMINKGEFKLAPTPPVNLAEANISPVKENNELGS----TTGNPVE---FS 150 Query: 142 PPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFT 201 P P E P ++ S P G+ PP A G + P Sbjct: 151 YPQPLSESSPVSSDNSTPVDGTT---PPDAGPIWLGDIAIDNSAFTQPPA---------E 198 Query: 202 RNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDA 261 N K+ +P G F KA L+ G +A G E+ + R+ ++PN + Sbjct: 199 VNTEKKNQIQ--LPVG-FMKAHLLVGVNALTGEFGAENPQTVMFRVQAPAQLPNFIKMNL 255 Query: 262 TGCFVGLEAWGDVSSERAIVRTRNISCLKDGK--TIDMPIKGHVSF-RGKNGIKGEVVMR 318 +GCF G++S ER I ++ C+ K ++ IKG VS GK + VV R Sbjct: 256 SGCFSVANVTGNLSMERIIALPISMHCITRDKRFIVEGSIKGFVSDRDGKRDMSARVVSR 315 Query: 319 NGKILGWAWGAGFVDGIGQ--GMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTL 376 G +L A ++G G + +Q LG+ D+ K G + + Sbjct: 316 AGPLLASTIFAKSIEGFANVVGSQGVTQNVSALGSVNTIKNEDLAKTAATQGLAGGLSEV 375 Query: 377 SDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 Y + A+Q P + G+G +V + Q+ L+ E Sbjct: 376 GKYLLDLAKQTAPALETGSGKDVMLFIQETATLEIKE 412 >UniRef50_Q2N5I1 Pilus assembly protein n=5 Tax=Erythrobacter RepID=Q2N5I1_ERYLH Length = 438 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 105/417 (25%), Positives = 170/417 (40%), Gaps = 21/417 (5%) Query: 5 NTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDD 64 + I +R++ L GI + + + A D G+V+ + Sbjct: 30 SQIAQRQKMLLAGIGAIALIGGGMFIFGGDGDEGGSDANGAATI----DTGGLVNR---N 82 Query: 65 KVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALG 124 ++ + ++L R + ++ +E L +NA + +A Sbjct: 83 LSQREFVASYGNRLDAQGRAI----KDLQQTQLPRPEIEQELEALRSENAQMRSDGQAAI 138 Query: 125 ANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQV 184 Q+ + P P P P G+ P P + Sbjct: 139 DAISAENANLRSQLSEAAKAPATAPPLPPPPAYGPGVGTRRAAQPPQGAPETQGGQLSLM 198 Query: 185 TYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQ 244 ++ + + R T S Y+P S+A A +I G DA+ V +P+ Sbjct: 199 SFGAETGKDGKPRAAETAPALLLEASRDYLPPNSYAPATVIVGVDASTGVASQSDPLPVV 258 Query: 245 LRITGLV--EMPNSK--TYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMP-I 299 LRITG M +K T D TGC V A GD+S+E+ V+ ++C + G + + Sbjct: 259 LRITGPARSVMRGNKLLTTDITGCLVNGAARGDLSAEKVYVKLVRMTCAQPGGRFAVSEV 318 Query: 300 KGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGL-----GATAA 354 KG +SF G++G++G VV R G ++ A AG V G G+G + G A Sbjct: 319 KGFISFAGRSGVRGRVVSREGSLVSQALLAGIVGGFGRGFSANANGIFAGQVGSDGQREA 378 Query: 355 YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKT 411 D+L G G GA +AA T+S Y I+RAEQY PV+ + G EV +VF DG +++ Sbjct: 379 LSPTDILAGGFGQGAGEAADTVSRYLIERAEQYQPVVEMPTGIEVEIVFLDGVHVRS 435 >UniRef50_A4XE89 TraB pilus assembly family protein n=6 Tax=Sphingomonadaceae RepID=A4XE89_NOVAD Length = 458 Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 109/433 (25%), Positives = 174/433 (40%), Gaps = 40/433 (9%) Query: 5 NTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDD 64 N V++KQ L LG + ++ D + +V Q + +V+ + Sbjct: 36 NEAVRKKQMLLLGAGGLAALVIGSSWIF--AGDHKSSDASVKRQVADVSVDEMVNKNMAE 93 Query: 65 KVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQ---------------RGDDQRRIEKL 109 K + + ++ + + D L Q D +R + Sbjct: 94 KEWRAQSEAQMMSMDTNMRALAARAQRADQLEAQLAQGQAAQSTSGGGISPDTERVLSAY 153 Query: 110 GQDNAALAEQVKALGANPVTATGEPV--PQMPASPPGPEGEPQPGNTPVSFPPQGSVAVP 167 +N L + A +PV G P P +TP + +P Sbjct: 154 QNENEQLKAALAAARQSPVMGAGATPVGPNALYGRTSPPSYQTAPSTPAGQAAMAAAGLP 213 Query: 168 PPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEG 227 V+ + PVP VFT S Y+P S A A +I G Sbjct: 214 AGRGSEVS-LVSFNEGASGTGSPVPK--GNTVFT-------DSANYLPPNSIAVAKVIVG 263 Query: 228 ADANASVTGNESTVPMQLRITGLV--EMPNSK--TYDATGCFVGLEAWGDVSSERAIVRT 283 DA A V +P+ LRITG N + T + GC V A GD+SSE+ V+ Sbjct: 264 VDAAAGVQSQTDPLPVVLRITGPARSVYDNGRLLTTNIAGCLVNGAARGDLSSEKVYVKL 323 Query: 284 RNISCLK-DGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA 342 + ++C + +G+ +KG ++F GK G++G VV R G ++G A+ AG G G+G Sbjct: 324 QRMTCPQPNGRYAVSDVKGFIAFGGKTGVRGRVVSREGSLIGQAFLAGLAGGFGRGFAAN 383 Query: 343 SQPAVGL------GATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAG 396 + + G G GD+L+ G+G G + + +S Y I+RAEQY PVI + G Sbjct: 384 TNSTLTGTNVNVNGQRQKLGTGDILEGGLGEGIATSGDMVSKYLIERAEQYQPVIEMPTG 443 Query: 397 NEVTVVFQDGFQL 409 +V +VF +G + Sbjct: 444 IDVEIVFLEGVFI 456 >UniRef50_Q3IUW6 Putative conjugative transfer factor, TraB n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW6_RHOS4 Length = 417 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 100/347 (28%), Positives = 150/347 (43%), Gaps = 25/347 (7%) Query: 89 RRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGE 148 R ++D LNK + ++ + + A+ E+++ + + + P P Sbjct: 71 REQIDQLNKTVTELTNTVKGMAEKQASDLEELRTQYDEVIVQQQAEINSLKTGAPVPAVG 130 Query: 149 PQPGNTPVSFPPQ----GSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNE 204 + G Q G P G P V FT Sbjct: 131 GETGEAQAPGYGQEFVSGGTRTPAAGRAGQGGAAGPGAPGAAPMVQRFGAGASVDFTLQP 190 Query: 205 GKQGPSLP-------------YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLV 251 + P+ P YIP+GS+A A++I G DA+ V ++ VP+ +RITG Sbjct: 191 KPEKPTTPEEESSRNVRDLHSYIPAGSYAPAVVISGVDASTGVVSRDNPVPVLVRITGPA 250 Query: 252 E-----MPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDG-KTIDMPIKGHVSF 305 + + TGC V A GD+SSER VR ++C+ G K I+ + G V+ Sbjct: 251 VTAAAGAGAGRRINLTGCTVLGSAMGDLSSERVYVRLTTLTCMGRGNKVIETQVAGLVAG 310 Query: 306 RGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGA--GDVLKM 363 GK G++G VV R G + A AG + G + + A+ A G+ G Sbjct: 311 SGKAGVRGHVVSREGNLATNAAIAGALGGFAKALTSAASIASSNDGAETVGSVLGGAGAG 370 Query: 364 GIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 +GGGA+ AA L++YYIKRAEQY PV+ + AG V VVF +G LK Sbjct: 371 VVGGGAASAADRLAEYYIKRAEQYQPVVSLYAGTNVEVVFMEGVSLK 417 >UniRef50_A0R7R0 TraB pilus assembly family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7R0_PELPD Length = 468 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 91/447 (20%), Positives = 168/447 (37%), Gaps = 51/447 (11%) Query: 11 KQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHA 70 KQ + + + T+ A+ S E + D++ ++T +K R Sbjct: 19 KQRKTIVLALAFTSVAVIALFGWSQSRAKIKPVNTEEPKKRKDIS--IETGMLEKKR--- 73 Query: 71 TTEMQVTAAQMQKQYEEIR--RELDVLNKQRGDDQRRI-EKLGQDNAALAEQVKAL---- 123 + Q +++KQ + I+ + +D D + G+D + A Sbjct: 74 ELDNQAEVERLKKQIDAIKNGKPVDENGDPLPDGADPFTDPAGKDGTGVVPGSLAPKIGP 133 Query: 124 ---GANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 G N V G+ + P + PG + S+ PP + N + Sbjct: 134 IKSGQNQVGPNGQRLGNQPQGGQQGNAQSGPGGVGNNQVAGMSLPPLPPGSSKGRNSIPG 193 Query: 181 PPQVTYQS-----------------VPVPNRIQRKVFTRNE-------------GKQGPS 210 P + + + + + K+ + Sbjct: 194 MPTTGGIPGVPPGTPGGPGVPGAAMITRQEMGEISIVSYEKRAGDSKSRSDKYGKKKATT 253 Query: 211 LPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEA 270 Y+P S+ +A L+ GA + + + +P+ LR+ +PN GC++ + Sbjct: 254 TVYLPP-SYMEATLLSGAYIPTTESAKGNPMPVLLRVKTPAFLPNEAKAAVKGCYIIADG 312 Query: 271 WGDVSSERAIVRTRNISCL-KDGK-TIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAW 327 ++++ERA + ++SCL K G+ ID +KG + G GI G+VV + G ++ + Sbjct: 313 KANLATERAEMTIVSMSCLDKKGRAVIDQKVKGWLIDSDGVAGIGGKVVAKMGTMVARSL 372 Query: 328 GAGFVDGIGQGMERASQPA--VGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAE 385 AGF GIG ++ A+ LG T + D G+GGG S + + +Y+ A+ Sbjct: 373 IAGFAGGIGDALKAAATTTSVSALGTTQSIDPKDAAMAGVGGGLSNGFKEIQKFYLDLAK 432 Query: 386 QYHPVIPIGAGNEVTVVFQDGFQLKTV 412 Q P + I VTV +G L Sbjct: 433 QTMPTVAILPSKTVTVAISEGVVLNIK 459 >UniRef50_Q19NS7 ThrB n=10 Tax=Enterobacteriaceae RepID=Q19NS7_ECOK1 Length = 455 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 81/371 (21%), Positives = 144/371 (38%), Gaps = 25/371 (6%) Query: 64 DKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKAL 123 +++ Q+A E + A + Q++ + L +Q ++ N L Sbjct: 82 NRLDQNAAKEDREKAEKAQQETKAQVASLTSQLQQLSQQINDMQTNRNGNRNLDAGSSRK 141 Query: 124 GANPVTATGEPV--PQMPASPPGPEGEP--QPGNTPVSFPPQGSVAVP-----------P 168 N P + P N+P+ Q S+ Sbjct: 142 TINEQAPAAPYQLNANAPINGVNPNYASITPTRNSPMRTITQSSIKTNGTDGVIQVMPVS 201 Query: 169 PTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA 228 G V + ++V R+ ++ ++P+ S +LI G Sbjct: 202 ENRIKEGREVIAGDKAPTRTVRGDGTAPVDSKARHAARKDEM--FLPATSIITGVLITGL 259 Query: 229 DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISC 288 +A S++ +P+ +RI V MPN+ T D C + A GD++S+RA +R +ISC Sbjct: 260 EAPTSLSSKSEPMPVTMRIKKDVIMPNNFTMDLRDCNLLGSAVGDLASQRAYIRATSISC 319 Query: 289 LKD-GKTIDMPIKGHVS--FRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP 345 + GK D+ ++ + GKNGI+G ++ RNG + A AG + + + + Sbjct: 320 VNSKGKAFDVKLEAYAVSENDGKNGIRGTLISRNGNAIAGAAFAGGLSSLAGSLSPSKVS 379 Query: 346 AVGL--GATAAYGAGDV---LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVT 400 ++ + + A Y + + + G A L DYY AEQ P++ I G +T Sbjct: 380 SLNIDPNSQAQYQSPNFGALGALAGAGAAQGGLNRLVDYYTAIAEQQWPIVEISPGRAIT 439 Query: 401 VVFQDGFQLKT 411 V Q G + T Sbjct: 440 FVVQTGTTIPT 450 >UniRef50_A9AU14 Putative uncharacterized protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AU14_BURM1 Length = 453 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 86/364 (23%), Positives = 137/364 (37%), Gaps = 27/364 (7%) Query: 78 AAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKAL-GANPVTATGEPVP 136 + Q +++++ L K D + A + P + G Sbjct: 95 LEDLAAQVGSLQQQVVTLTKAVSDGKAGGAPDASKLTTTWTPASAPSASTPTPSDGSNNS 154 Query: 137 QMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQ 196 + P QPGN P S + A + PP ++ V Sbjct: 155 PLGKDLPDAVNFDQPGNRPSSASGSIAGTAAADPAAFAAARPAEPPAPARPTLVVDKPAP 214 Query: 197 RKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTV-----------PMQL 245 N K P+ P S +A+++ G +A N P Sbjct: 215 STASAGN-PKPDPTF---PIYSGIEAVMLSGFNARQGG-SNGGPAGAVTKAIDVGAPFVS 269 Query: 246 RITGLVEMPNSKTY-DATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIKGH- 302 R+ G MPNS D CF+G A +S+ERA V + ISC+ K+G+ + I + Sbjct: 270 RVKGATIMPNSWKSSDLENCFIGGSATAVLSAERAYVISDKISCVFKNGEIYEGDIVAYG 329 Query: 303 VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPA----VGLGATAAY--- 355 + G G+ G+VV + G +L A G G+G + + + V G+T AY Sbjct: 330 LDVDGNLGLAGKVVNKQGSMLMQAALTGMAAGLGSALAPTAVSSYNSNVSAGSTGAYTYP 389 Query: 356 GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEM 415 +L +G G +KAA LS +Y+ A++ PVI + AG VT + + LK Sbjct: 390 SPSFLLGTSVGTGVNKAATELSQFYLNFAKETFPVIEVTAGTRVTWILKQALTLKRKTPP 449 Query: 416 ALER 419 +R Sbjct: 450 KDQR 453 >UniRef50_D2U001 Conjugal transfer pilus assembly protein TraB (Fragment) n=1 Tax=Arsenophonus nasoniae RepID=D2U001_9ENTR Length = 230 Score = 133 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 52/272 (19%) Query: 14 LWLGIVVVGTASAIGGALYL----SDVDMSGNGETVAEQEPV---PDMTGVVDTTFDDKV 66 + + G + ++ S V+++ TV P PD+TG + TFD+KV Sbjct: 1 MVFSAIGFGVVAIFTLLWWINRQASGVELTAADSTVQSGNPSAQEPDLTGAITNTFDNKV 60 Query: 67 RQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGAN 126 + + T+ Q++ + R+ +DVL K+ +R + + +N+ L V L A Sbjct: 61 QGNVVTDAQLSE-------KANRQTMDVLLKEIQGIKRDFDAVKNENSQLKANVGQLQA- 112 Query: 127 PVTATGEPVPQMPASPPGPEGE--PQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQV 184 ++ + EGE P PG + VS PPQ ++ Sbjct: 113 ----------EIQHNKKAMEGENSPTPGASQVSHPPQIAI-------------------- 142 Query: 185 TYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQ 244 +P ++ FT + + PS Y+PSG+F+ A+++EGADANASV G V MQ Sbjct: 143 ----LPAKGQLGSTRFTYPKKENMPSGFYVPSGTFSTAIVLEGADANASVKGETKKVAMQ 198 Query: 245 LRITGLVEMPNSKTYD-ATGCFVGLEAWGDVS 275 ++TGL +P ++ + T CFV AWG++S Sbjct: 199 FKLTGLAHLPGNQKLNKLTNCFVTASAWGEIS 230 >UniRef50_B3CUL3 Putative conjugative transfer protein TraB n=1 Tax=Orientia tsutsugamushi str. Ikeda RepID=B3CUL3_ORITI Length = 368 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 13/169 (7%) Query: 299 IKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQ-----PAVGLGA- 351 ++G + G++GIKG VV ++ I G A G I + ++ + P + L A Sbjct: 1 MEGWLIGEDGRSGIKGIVVDKSSNIAGMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAG 60 Query: 352 ---TAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 + GD + G GAS A L+D+ IKRA+ P+I + +G + VVF+ GF Sbjct: 61 GQQQQEFQIGDAFQSGAYAGASNAFDKLADFAIKRADSMSPLIVVASGRVIDVVFKKGFD 120 Query: 409 LKTVEEMALERTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGN 457 L+ E + S +P + + ++ + L N Sbjct: 121 LR---EHKKKPHNSTYSPSTGNEDENLPAESSLQVLMIGSNNIENFLSN 166 >UniRef50_C4YZI3 F pilus assembly protein TraB n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4YZI3_9RICK Length = 235 Score = 97.2 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 15/117 (12%) Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL-KTVEEMAL-- 417 LK G+ G A + L+D+ IKRAE PVI +G+G V VVF+ GF L + EE L Sbjct: 102 LKAGVYSGTGNALEKLADFAIKRAESMSPVIVVGSGRVVDVVFRKGFDLIDSGEEQQLIA 161 Query: 418 ------ERTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQ 468 ++ R ++N PS + +N F + K L ++F+ + Sbjct: 162 YGGNFTQQENYRNHQNNNH-----YPSGSNRINSFGNNNFSKTNQKLR-ERFLKDDE 212 >UniRef50_A5CDW0 Conjugative pilus assembly protein n=23 Tax=Orientia tsutsugamushi RepID=A5CDW0_ORITB Length = 156 Score = 86.1 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 9/93 (9%) Query: 326 AWGAGFVDGIGQGMERAS-----QPAVGLGA----TAAYGAGDVLKMGIGGGASKAAQTL 376 ++ + I + ++ + P + L A + GD L+ G GAS A L Sbjct: 32 SYVSAIFSSIAKFLQTKAIKPDMTPTLNLVAGGQQQQEFQIGDALQSGAYSGASNAFDKL 91 Query: 377 SDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 +D+ IKRA+ PVI + +G + VVF+ GF L Sbjct: 92 ADFAIKRADSMSPVIVVASGRVIDVVFKKGFDL 124 >UniRef50_A9MS59 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A9MS59_SALAR Length = 445 Score = 68.3 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 110/374 (29%), Gaps = 51/374 (13%) Query: 64 DKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKAL 123 + V+ +Q +++ R + +N+Q+ ++ +L +Q+K Sbjct: 79 ETVKASNAALVQENQRLREREQNTDSRISEAINRQQTSASQQQNELLNSLQTQIQQLKGN 138 Query: 124 GANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVP-PPTAFYPGNGVTPPP 182 + G + + P GEP P P P P +P +P P Sbjct: 139 RTTDDSLAGLGIDE----PEAASGEPLRWIAPADALPTDKNGRPLQPALAFPSAMHSPTP 194 Query: 183 QVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGN----- 237 Q + +P S + G+ A ++ G Sbjct: 195 QPEASPPAAVKPVYT----------------LPQNS-----TLIGSVAMTALLGRIPLNG 233 Query: 238 --ESTVPMQLRITGLVEMPNSKTY-DATGCFVGLEAWGD--VSSERAIVRTRNISCLKDG 292 P ++ I N D G + A GD +S R + + +DG Sbjct: 234 SVTDPYPFKVLIGRDNLTANGIELPDIEGAVISGSATGDWTLSCVRGSLTSITFV-FRDG 292 Query: 293 KTIDMPIKGHVSFRGKNG-------------IKGEVVMRNGKILGWAWGAGFVDGIGQGM 339 +P +G + G G I GE + +G + Q + Sbjct: 293 TVRTLPAEGDKTGSGTEGNIGWLSDPHGLPCIPGERKSNAAEYIGSQFLLAGSSAAAQAL 352 Query: 340 ERA-SQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNE 398 + V G+ GD + +G + +D++ +R Q I + G Sbjct: 353 ANNQTTSTVEDGSITTALTGDSGQYVLGQALGGGLKESADWFKQRYGQMFDAIYVPPGQA 412 Query: 399 VTVVFQDGFQLKTV 412 V + + Sbjct: 413 VAIHITRQLAIDYD 426 >UniRef50_Q4QPC9 Conserved putative exported protein n=5 Tax=Haemophilus influenzae RepID=Q4QPC9_HAEI8 Length = 466 Score = 66.0 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 67/375 (17%), Positives = 112/375 (29%), Gaps = 31/375 (8%) Query: 84 QYEEIRRELDVLNKQRGDDQRRIEK-LGQDNAALAEQVKALGANPVTATGEPVPQ--MPA 140 Q E + +E + L Q + +I++ + + AL ++ AL V A + V A Sbjct: 91 QNERLVKENEQLKNQANNTDYQIQQAVQAETGALINEINALKDQVVQAGNQVVGNGNAQA 150 Query: 141 SPPGPEGEPQPGNTPVSFPPQGSVAVPP--PTAFYPGNGVTPPPQVTYQSVPVPNRIQRK 198 +P P P G V P V + P Sbjct: 151 NPNAPLPINGATTGPQVETRGGINWVNPSDMPTTDRQGNALQGIGVNGAGIGFPKTFDNN 210 Query: 199 V---------FTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGN-------ESTVP 242 V + G P + A + + A ++ G P Sbjct: 211 VNDIRKSNDGLQSSTGNNAIFNTATPFFTIAANSTLTNSVAMTALVGRVPIDNKVTEPYP 270 Query: 243 MQLRITGLVEMPNSKTY-DATGCFVGLEAWGD--VSSERAIVRTRNISCLKDGKTIDMPI 299 +L I + N D G V A GD +S R V++ DG+ + Sbjct: 271 FKLLIGRDNLIANGIELPDIEGAIVSGTASGDWTLSCVRGDVKSLTFV-FSDGRIVSTDN 329 Query: 300 K----GHVSF-RGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMER-ASQPAVGLGATA 353 G +S G I GE + L + QG+ S V GA Sbjct: 330 SDDKIGWLSDPHGVPCIPGERRTNAPEYLTTNFFLTGASAAAQGLSSSQSTTVVDGGAVI 389 Query: 354 AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 G+ K +G + +D++ +R Q + + G EV V + + Sbjct: 390 GAVTGNNGKYILGQALGGGLRETADWFRQRYGQMFDAVYVPPGKEVAVHIEKQIDIDYDR 449 Query: 414 EMALERTQSRAEEDN 428 + + + N Sbjct: 450 MSRKVKYGQASRQSN 464 >UniRef50_A5IEK4 Exported membrane protein n=4 Tax=Legionella RepID=A5IEK4_LEGPC Length = 437 Score = 63.3 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 58/406 (14%), Positives = 127/406 (31%), Gaps = 42/406 (10%) Query: 16 LGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHA--TTE 73 G+ ++ AL + + V +P ++ + + F+D +R A E Sbjct: 5 AGLKILTVTVIAVVALIMMNSKHHDREPEVTRPDP-NNLNEAIASQFNDNIRDVAARLQE 63 Query: 74 MQVTAAQMQKQYEEIRRELDVLNKQ-RGDDQRRIEKLGQDNAALAEQVKALGA------N 126 + A ++ + +++R + + + + + IE+L + A + ++ N Sbjct: 64 TEKKLANLESENKQLRSKKENVQASYNPEVIKEIEQLKSELANVKTSQESQQNSQPYTVN 123 Query: 127 PVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTY 186 + + E P + + P + Y Sbjct: 124 GESTLAKEQSVKDIDALLMNRESNPNEQAYWEGLKKTKQALTPKVKTAALNSKDKKSIPY 183 Query: 187 QSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLR 246 ++P + + R + P + F + +I D A N +P Sbjct: 184 YTIPAGSDLGRTTLLSALIGEVPVEGKLMQPLFPFSAIINRGDLMA---ANGIPLP---- 236 Query: 247 ITGLVEMPNSKTYDATGCFVGLEAWGD-VSSERAIVRTRNISCLKDGKTIDM---PIKGH 302 PN G +G+ ++ D +S RA V T + DG + + + G Sbjct: 237 -------PNISGMKVNGYAIGVGSFLDNISCVRAYV-TSALFVFDDGHFVTVGKEQMTGT 288 Query: 303 V------------SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP-AVGL 349 + G IKG+ ++L + + G G + + Sbjct: 289 AEMVNNESLGYLTTAFGNPCIKGQYFTNAPRVLTALVASDGIKGFGNALSQWQMSYTANA 348 Query: 350 GATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGA 395 G + +GG S+ +D+ KR + ++ + A Sbjct: 349 NGATGIPTGSMGNYALGGALSQGTVKAADWLEKRIQGSFDMVFVPA 394 >UniRef50_Q5ZWU4 Exported membrane protein n=4 Tax=Legionella pneumophila RepID=Q5ZWU4_LEGPH Length = 419 Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 66/409 (16%), Positives = 135/409 (33%), Gaps = 69/409 (16%) Query: 19 VVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTA 78 + + + S + + + P + + + F+D +R + Sbjct: 7 IKILSGSVVFAVVMILINSRHSTPIHDDTPNP-NNFHEAITSQFNDNIRD-----VSARL 60 Query: 79 AQMQKQYEEIRRELDVLNKQRGDDQRRIEK-LGQDNAALAEQVKALGANPVTATGEPVPQ 137 + +K+ E++ +E L KQ + L + L E++ AL Sbjct: 61 LETEKKLEQMHKENKSLQKQLKQPIQEASHTLQDELQTLKEKLSALTD------------ 108 Query: 138 MPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQR 197 + S+P +G+ A + P + ++ Sbjct: 109 ---------------HQTQSYPMEGNQASISGRIKDLDGLLDKAPIES------KIFAEQ 147 Query: 198 KVFTRNEGKQGPSLPYIPSGS-FAKAMLIEGADANASVTGN-ESTV-PMQ-LRITGLVEM 253 T+ E IP+GS F+K L+ V G + P + G + Sbjct: 148 DTTTKEEAPTKTPFYTIPAGSDFSKVTLLSALMGEVPVEGKLMQPLFPFTAMVSRGDLMT 207 Query: 254 PNSKT-------YDATGCFVGLEAWGD-VSSERAIVRTRNISCLKDGKTIDM-------- 297 N +G +G+ ++ D +S RA V T + +DG + + Sbjct: 208 ANGMQLPEEIIGMKISGYSIGVGSFLDNISCVRAYV-TAALFVFEDGHFVSIGQEQMKSS 266 Query: 298 ------PIKGHVS-FRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLG 350 G+++ G IKG+ + ++L AG + G G + + G Sbjct: 267 AELVNNDSIGYLTTQFGNPCIKGQYITNAPRVLTAFMAAGGIQGAGNALSKWQMSYQAEG 326 Query: 351 ATAAYGA-GDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNE 398 +A GD+ GG ++ +Q ++D+ KR + ++ + A Sbjct: 327 GSAIATPTGDLAHFAAGGAINEGSQKITDWLEKRIQGSFDMVFVPASIR 375 >UniRef50_D2W236 FH2 domain-containing protein n=2 Tax=Naegleria gruberi RepID=D2W236_NAEGR Length = 2131 Score = 61.8 bits (148), Expect = 6e-08, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 66/205 (32%), Gaps = 28/205 (13%) Query: 38 MSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNK 97 + E ++ E V D+ +++ + + ++ +QKQ + I ++ L Sbjct: 383 IKAVSEKISSLEWVNDIKIILEGS-------ESVNLLKDRNLSLQKQVDTITKDNAQLKD 435 Query: 98 QRGDDQRRIEKLGQ-------DNAALAEQVKAL-----GANPVTATGEPVPQMPASPPGP 145 Q + RIE L + A+ QV L G+N P P Sbjct: 436 QMEKLKVRIEALEKAPPTVIVKKVAVVRQVGELKSSGSGSNLAGLVESNSPTTSPPNIFP 495 Query: 146 EGE---------PQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQ 196 + P P + V PP G V PP + PP ++ P P Sbjct: 496 DDTVPSCNSSVPPPPQASSVVPPPPGMGGVVPPPPIGSSSVPLPPMTISSSVPPPPVGFN 555 Query: 197 RKVFTRNEGKQGPSLPYIPSGSFAK 221 V + P + +P S Sbjct: 556 SSVPPSSSIPLPPVMGTVPPNSAIP 580 >UniRef50_C6DZ83 Conjugation TrbI family protein n=1 Tax=Geobacter sp. M21 RepID=C6DZ83_GEOSM Length = 410 Score = 59.9 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 66/415 (15%), Positives = 120/415 (28%), Gaps = 37/415 (8%) Query: 11 KQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHA 70 + L V+ T SAI ++ + + + A + D + Sbjct: 22 RINRRLIAVISATVSAIVAFALVAGLSPKESAKGEAAVRQPQEKNQT-SPGLPDPLVSAP 80 Query: 71 TTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTA 130 T + A Q R + + + Q + + G + Sbjct: 81 GTYAEAKAKSSQ------RPTPRQNPEPAKEPTAPVASPLQPAYTVTAPGQPPGERGESQ 134 Query: 131 TGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVP 190 + Q + P G+ + P P+G + VPP PG P Y Sbjct: 135 AQK-DAQTAINSPVTFGQNEAPQQPKQEEPRGGLMVPP---LPPGIAGMPQAVERYADDQ 190 Query: 191 VPNRIQRKVFTRNEGKQ--------GPSLPY-IPSGSFAKAMLIEGA--DANASVTGNES 239 +R+ + + P Y I +G+ A LI G D + Sbjct: 191 NLQGEKREFSRERQAELPYIKTTLIAPISQYEIKAGTILPATLITGINSDLPGQIVAQLR 250 Query: 240 TVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPI 299 + +P G + A+G ER +V + L +G +I + Sbjct: 251 ENVYDSVTGNHLLVPQGTR--LIGEYDSKVAFGQ---ERVLVIWTRLI-LPNGSSIGLEG 304 Query: 300 KGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGD 359 + G G+ G+V GK++ + Q V +G A Sbjct: 305 MPGIDLSGYAGMTGKVNNHYGKLITGVVLGSVIGAGAQ---------VAVGGQGAPNVPP 355 Query: 360 VLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 GA++ + + + P I + G+++ V LK E Sbjct: 356 SFGQLAVSGAAQNINQTAQRHTDKVLNMQPTIEVTPGDKINVFVTKDMILKPFTE 410 >UniRef50_C2LLI8 Exported protein n=20 Tax=Proteobacteria RepID=C2LLI8_PROMI Length = 498 Score = 59.9 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 63/418 (15%), Positives = 116/418 (27%), Gaps = 53/418 (12%) Query: 49 EPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRE-----LDVLNKQRGDDQ 103 P + ++ T + RQ + Q ++ + R + + Sbjct: 63 TPADTLRTLIGTMKTVRDRQAELIAQNEKLLEENAQLRNRQQNVSGQIQSAVASVRQEAE 122 Query: 104 RRIEKLGQDNAALAEQVKALGANPVTATGEPV-----PQMPASPPGPEGEPQPGNTPVSF 158 + L Q+ L ++ +LG + G+P +P G Sbjct: 123 SQQRALQQEQQTLMRRLDSLGETLTASGGQPAQGSGQGDIPLGLGLDTGGSGLTVKDGLL 182 Query: 159 PPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYI---- 214 + A P P T Q+ R Q + Sbjct: 183 WAEPQDAQPAEPGRMVNGQPAKPAFPTSFLEDNAITRQKAELDRVAKNQRTLSGTVDGEA 242 Query: 215 ---PSGSFAKAMLIEGADANASVTGN-------ESTVPMQLRITGLVEMPNSKTY-DATG 263 P+ + + + G+ A ++ G P ++ + N D G Sbjct: 243 HTEPAYTIPENATLVGSQAMTALLGRVPIDGKVTDPYPFKVVVGKDNLTANGIELPDVEG 302 Query: 264 CFVGLEAWGD--VSSERAIV--------------------RTRNISCLKDGKTI--DMPI 299 + A GD +S R + RT S G+ + Sbjct: 303 AVISGSATGDWTLSCVRGDITSITFVFTDGTIRTVPKPADRTDGGSQANSGQNARNNGGS 362 Query: 300 KGHVSFR-GKNGIKGEVVMRNGKIL--GWAWGAGFVDGIGQGMERASQPAVGLGATAAYG 356 G +S G I GE G L +A A G + + G G T++ Sbjct: 363 LGWISDESGIPCISGERKTNAGTYLPTLFALTAAASAGDAMSQSQYTAQNNGYGITSSL- 421 Query: 357 AGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 +GD K +G + ++D+ R Q + + G +V V + + Sbjct: 422 SGDAGKAALGSAIGGGFKDVADWVKSRYGQTFDAVYVPPGQKVAVHISRQIPVDYESQ 479 >UniRef50_C3WYE2 Conjugal transfer protein TrbI n=2 Tax=Fusobacterium RepID=C3WYE2_9FUSO Length = 421 Score = 58.7 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 57/364 (15%), Positives = 115/364 (31%), Gaps = 61/364 (16%) Query: 84 QYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASP- 142 Q +E+ +EL ++ + + +++ ++N E EP P Sbjct: 71 QEKEVGQELKDIDYANRNTLKVVDEQLKNNYEEEEDPDIENPEYNIPATEPDPIEEYMKA 130 Query: 143 -------------PGPEGEPQPGNTPVSFPPQGSVAVPPPTAF------------YPGNG 177 P + +S S A+ G+ Sbjct: 131 QELKKLQRYYDAREAPFKKNANKIGDISTSELYSENETSTPAYSSDKEYLDYIMAGIGDN 190 Query: 178 VTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVT 235 T P + + N +N S + +G+ ++ D S++ Sbjct: 191 NTNPNMQKEKKQFLKNAAVNNFVLKNPLTPPISKFEVKTGTLIPVVITSSINSDLPGSIS 250 Query: 236 G--NESTVPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSE------RAIVRTRNI 286 E+ + +TG + P +G SSE R + Sbjct: 251 AMVREN---IYDTLTGTEILIPAGSKL-----------YGKFSSEVSWGQTRVQAVFNRL 296 Query: 287 SCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPA 346 + L +GK+I++ G +G++G+ G+V + GK++G AG V G + Sbjct: 297 T-LPNGKSINLGAMGVADAQGRSGLTGDVDLHLGKVIGSIIMAGVVGGADGALTNNGNYR 355 Query: 347 VGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDG 406 G+ G + + D Y + + P I + AG+ T++ ++ Sbjct: 356 ---------KDGNSALSRAGEESGRTTVETVDKYTSKVLEVQPTIWVEAGSRATLMIEED 406 Query: 407 FQLK 410 L+ Sbjct: 407 LILE 410 >UniRef50_B3DV88 Type IV secretory pathway, VirB10 component n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV88_METI4 Length = 400 Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 107/321 (33%), Gaps = 25/321 (7%) Query: 101 DDQRRIEKLGQDNAAL-AEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFP 159 +D+ ++ + AL E++ P P + + E P PV Sbjct: 76 EDKSSLKAVVPKEVALSKERISEPSLPPAQVKAPPQYKEKETLGFLEQPPPDRTAPVPRG 135 Query: 160 PQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSF 219 A+ + + + Y + T ++G L I SF Sbjct: 136 IVDQKALAKDSQSGDQPIIIKWAKKRYLFRNLSLSATETAGTEDKGGSEGPLANIDVNSF 195 Query: 220 AK-AMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDA----TGCFVGLEAWGDV 274 A +IE A N++ + N + + G V +P + +G G Sbjct: 196 APQGEMIEAALVNSAFSSNTD-----VDVVGAVWLPFYFQGNLLLEPGDRLIGTSGGGSA 250 Query: 275 SSERAIVRTRNISCLKDGKTIDMPIKG-HVSFRGKNGIKGEVVMRNGKILGWAWGAGFVD 333 +R +V I KDG+++ PI+G + G GIKG V GK L A Sbjct: 251 LRDRMMVHIDKII-FKDGRSL--PIQGVALHTDGTEGIKGYRVSEYGKQLLGPILAAMGQ 307 Query: 334 GIGQGMERAS----------QPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKR 383 ME S P G A GA L +G + A Q + + + Sbjct: 308 AFLYAMEYQSFNYYMSPYGLTPWGLYGQPAYNGAKQALMLGGMYAGTNAMQQVMNILAQD 367 Query: 384 AEQYHPVIPIGAGNEVTVVFQ 404 +QY P + + AG V + Sbjct: 368 IDQYKPYVFVPAGTRFRVFLK 388 >UniRef50_C3WX80 Conjugal transfer protein TrbI n=3 Tax=Fusobacterium RepID=C3WX80_9FUSO Length = 373 Score = 54.9 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 26/235 (11%) Query: 186 YQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGADANASVT----GNEST 240 S I + PY + +GSF +L+ G D+ E+ Sbjct: 159 STSTEESKNITEDTEYNKYSIKEVKSPYELKAGSFIPGILVSGVDSQIEGKMVGLVREN- 217 Query: 241 VPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPI 299 + I+G + P G + A+G +R ++ + + +GK+I + Sbjct: 218 --VYDSISGKYLLIPKGTK--IIGEYSSGVAYGQ---DRILIIWQRLI-FPNGKSISLEN 269 Query: 300 KGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGD 359 V G+KG V N ++L + + G + R+ + + Sbjct: 270 FPGVDLSAYAGMKGRVNNHNIELLKSVILSSVLGGGAALVNRSKDTRI-------QSWEN 322 Query: 360 VLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 + G G +LS+ + P I I G+ ++ L+ +E Sbjct: 323 AMASGAGERIIDIGDSLSERILN----IKPTITIKPGSRFNIIVNADLILEPYKE 373 >UniRef50_C7N9P2 Conjugation TrbI family protein n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7N9P2_LEPBD Length = 449 Score = 54.5 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 64/413 (15%), Positives = 119/413 (28%), Gaps = 36/413 (8%) Query: 18 IVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVT 77 I++ + I ++Y + + EQE V ++ + +D V A QV+ Sbjct: 51 ILICIISGLIFASIYFA--NQVKKNMKSNEQEKVDSISTGTELDINDAVNTQANKNPQVS 108 Query: 78 AAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGA------------ 125 Q E I D +N A + Sbjct: 109 ETIAQSGTENINTASDKTGTPNLSQYDSQLGSDYNNDNFDSSYGASTSPPSFSNVSENEN 168 Query: 126 -NPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQV 184 N + P + G + +T P+ P + Q Sbjct: 169 TNTSATSVAPSEKYKEWRKSSIGFDKGVSTQTPQVPEQYQEQQPASQNTQQQNENDTDQN 228 Query: 185 TYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGA--DANASVTGNESTV 241 +S + + ++ F K Y + +GSF A+L+ D V Sbjct: 229 KQKSKSLFLKQKQDSFYSTNLKNPAIGKYELKTGSFIPAVLVTAINSDLPGDVIAQVREN 288 Query: 242 PMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKG 301 R + +P G + +G R ++ + + + ++G Sbjct: 289 VYDYRTGKNILIP--MGTKIIGKYDSSITYGQ---NRVLLIWQRLVFPNGSTLVLDNMQG 343 Query: 302 HVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVL 361 V G G+KG+ K++ + ++ I G + G+ + Sbjct: 344 -VDLLGNAGLKGKTNNHFWKLMRSVLLSSAIN-IASGSLEGLNVNIETGSRSRVN----- 396 Query: 362 KMGIGGGASKAAQTLSDYYIKRAEQ---YHPVIPIGAGNEVTVVFQDGFQLKT 411 IG G S AAQ + + E+ P I I G + + L Sbjct: 397 ---IGTGVSDAAQNIRSIGERIIEKDLNRQPTIEIKRGKKFNIFVSKDIILSP 446 >UniRef50_A8EYQ4 F pilus assembly protein TraB n=2 Tax=Rickettsia RepID=A8EYQ4_RICCK Length = 73 Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 2/65 (3%) Query: 244 QLRITGLVEMPNSKTYD-ATGCFVGLEAWGDVSSERAIVRTRNISCLKD-GKTIDMPIKG 301 +R+ + GD+SSERA +S + + G+ I ++G Sbjct: 1 MIRLVDTANFSKRYKTKQIKEVILIGSCSGDISSERAKCYLETVSFINNKGEIIKKNVEG 60 Query: 302 HVSFR 306 + R Sbjct: 61 WLIGR 65 >UniRef50_A5TXL6 Possible conjugal transfer protein TrbI n=3 Tax=Fusobacterium RepID=A5TXL6_FUSNP Length = 400 Score = 52.9 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 98/312 (31%), Gaps = 31/312 (9%) Query: 107 EKLGQDNAALAEQVKALGA-NPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVA 165 ++ QDN + + + N + SP +P V + Sbjct: 116 DEENQDNVEPQKSTEEIERENRLRQLESEADAAFRSPTTITIATRPQTQQVDNKVLLAQN 175 Query: 166 VPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLI 225 P Y GN N +K + N + S + +G F A L Sbjct: 176 GNKPVEDYDGNRQESKKNFLM------NEQAQKFYQTNFLVEQLSEFELKAGDFIPATLQ 229 Query: 226 EGA--DANASVTGNESTVPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVR 282 G D + V + ++ I+G + P G + +G ER +V Sbjct: 230 TGINSDLPSKVIVAVVSENVRDTISGKHILIPQGTR--VVGTYDSSVTFGQ---ERLLVV 284 Query: 283 TRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA 342 + + DGK+I + V GK GI GE+ G +L + + G + Sbjct: 285 WQRLI-FPDGKSIGLDNMQGVDLSGKAGITGEIDNHFGTLLKGVVLSSIMGSAGAIVT-- 341 Query: 343 SQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVV 402 + + GA + T+ D + +RA P I I G + ++ Sbjct: 342 -------------DRKNDWRGAAAEGAGEQIVTIGDRFAERALSRQPTINIEPGTRLNIM 388 Query: 403 FQDGFQLKTVEE 414 L+ E Sbjct: 389 VHSDLILEPYGE 400 >UniRef50_B1ZQ46 Putative uncharacterized protein n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZQ46_OPITP Length = 371 Score = 51.4 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 57/374 (15%), Positives = 106/374 (28%), Gaps = 52/374 (13%) Query: 89 RRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGE 148 R + + R + ++G+ L E +++ T + Sbjct: 33 RNQAEQKQAARLAASAKKAEVGKVKVPLDEGLESGVPQQATVSDSAKENAGGRIVPFRPP 92 Query: 149 PQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQS------VPVPNRIQRKVFTR 202 P P P S P + P PP +V YQ+ P P + Sbjct: 93 PAPTPAPASAPERAQTEAPAR--------EKPPRKVRYQTLLAAYVPPAPRHVD------ 138 Query: 203 NEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDAT 262 P ++P G+ K L+ D + + + I N + Sbjct: 139 ----PEPPKRFLPYGTLLKCKLVNTVD-------SSNLETPVIAILLEDVWQNGQRVIPA 187 Query: 263 GCFVGLEAWGDVSSERAIV-----------RTRNISCLKDGKTIDMPIKGHVSFRGKNGI 311 V A +R R + + + + I G+ G G+ Sbjct: 188 NTLVHGTAKAGRIRDRVSANGTWRFVWQDGRELAFNGVALDREYEHDIDGYGITDGSGGM 247 Query: 312 KGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASK 371 KG V+ + + + G +G + +Q A+G T + G+ G Sbjct: 248 KGRVLATDDLQELKMLASAALSGFARGTQDRTQTALGTTITGSVS------NGVREGVGD 301 Query: 372 AAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAEEDNPES 431 + ++ E + + AG E V + + + + + A P S Sbjct: 302 VFDLYAQRTLREIEANGYFVRVPAGKEFYVYVTESVNPEKAKIAGTKVEATAA----PTS 357 Query: 432 PVPVPPSAESHLNG 445 P S G Sbjct: 358 ASEAPTENGSRAKG 371 >UniRef50_B4W818 Bacterial conjugation TrbI-like protein n=2 Tax=Brevundimonas sp. BAL3 RepID=B4W818_9CAUL Length = 387 Score = 51.4 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 54/252 (21%), Positives = 85/252 (33%), Gaps = 37/252 (14%) Query: 172 FYPGNGVTPPPQVTYQ---SVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA 228 F G G P T S P R V+ + S + +G+ A L+ G Sbjct: 158 FGGGPGAQPSGGTTPAGGASSAGPGRDYGAVYNGHALMSPLSPFELKAGAIVPAALLTGI 217 Query: 229 DANASVTGNESTVPMQLRITGLVE---------MPNSKTYDATGCFVGLEAWGDVSSERA 279 D + S P+ +T V +P G G ++GD RA Sbjct: 218 DTSRSG-------PVVATVTQNVFDSISGRHLLLPQGTR--LIGRHDGESSYGD---RRA 265 Query: 280 IVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGM 339 + + L +GK++ + + V +G G++G V R + AG + +GQ + Sbjct: 266 FLTWERLI-LPNGKSLILTEEPGVDAQGAVGVQGRVDRRLFPLAVATLFAGAITTLGQ-I 323 Query: 340 ERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEV 399 R G A + +GG I R Q P I + AG V Sbjct: 324 ARDDDDDGGGLLGDVGDATAIEGARVGGSL-----------IDRELQVRPSIRLRAGAPV 372 Query: 400 TVVFQDGFQLKT 411 V+ L+ Sbjct: 373 RVLITRDLILEP 384 >UniRef50_B4U0L4 Emm-like cell surface protein CspZ.2 n=2 Tax=Streptococcus equi subsp. zooepidemicus MGCS10565 RepID=B4U0L4_STREM Length = 626 Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 69/195 (35%), Gaps = 14/195 (7%) Query: 33 LSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRREL 92 LS S + Q + + + Q T ++ A +QKQ + I ++L Sbjct: 416 LSSTLESTKAQLSETQAKLSEAQKQLTAA------QEKLTTLEAEKAALQKQVDTISKQL 469 Query: 93 ----DVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGE 148 D+ K++ Q +I KL + ++++AL + G+ P+ P PE + Sbjct: 470 SEARDLSEKEKAALQEQINKLKAEIEQKTKEIEALKQGMQSHQGQEKPKDP---KTPETQ 526 Query: 149 PQPGNTPVSFPPQGSVAVPPPTA-FYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQ 207 P P+ + P P +TP + P + + KQ Sbjct: 527 KAPKVPEDPKAPEKNDQPQAPEKRSVPWTALTPAKPIDTTKAPKNSAPSSQTGAATPKKQ 586 Query: 208 GPSLPYIPSGSFAKA 222 P+ + SF A Sbjct: 587 LPATGDTATPSFFTA 601 >UniRef50_A7RH89 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7RH89_NEMVE Length = 608 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 52/152 (34%), Gaps = 2/152 (1%) Query: 63 DDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAE--QV 120 DD + Q A+ +Q+Q + I EL L ++ + + E+L Q + + + ++ Sbjct: 435 DDGDSTEVAGDAQTLASLLQQQIDAINMELHYLQEEHKSTEEKTEELEQTSTSKSALHRL 494 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 A +T P P + P E +T FPP + P G Sbjct: 495 SATEEYLANSTSFPFPPLDPMDTTPIWEYLANSTSFPFPPLDPMDTTPIWVKSSKEGSLN 554 Query: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLP 212 + P P+ + + +P Sbjct: 555 NLNDESPTPPTPSSLASDSTESPKTSIASPVP 586 >UniRef50_D0SZZ2 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZZ2_ACILW Length = 485 Score = 49.1 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 53/334 (15%), Positives = 89/334 (26%), Gaps = 15/334 (4%) Query: 85 YEEIRRELDV-LNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPP 143 E RR +D+ L ++ + Q + +L +Q + G P S Sbjct: 163 LEAERRNIDMRLQAKQAEQQAVFQSKMNRLQSLEQQRANSQNDLGAVLGAPTSTGNNSAG 222 Query: 144 --GPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFT 201 G QP + + R F Sbjct: 223 LRSVNGSQQPNSGLNGLLGGAGGQDSFMPGGGGNKDDMYSINRQGEKEQWTQRPSNDNFY 282 Query: 202 RNEGKQGPSLPY-IPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYD 260 + P Y + +G+ A L+ G +++ T + + Sbjct: 283 LAKALIDPMSDYEVKTGTVIPATLVTGMNSDLPGQIIGQVRQNVYDSTSGRFLLIPQGSK 342 Query: 261 ATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNG 320 G + G +R +V + I ++G G G K +V G Sbjct: 343 LIGTYDNGVTMGQ---QRGLVAWQRIIFPNGSSMSLGTMQGT-DKAGYAGFKDKVDNHYG 398 Query: 321 KILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYY 380 +I G A +GQ G T + D + + + Sbjct: 399 RIFGQATLISMFSALGQ------IAVSDNGNTNRSNSQD-NRETLAEELGRQWSQTGQEL 451 Query: 381 IKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 IKR P I I G E V+ LK + Sbjct: 452 IKRNLNIAPTIRIRPGYEFNVMVNKDMILKPYGK 485 >UniRef50_C8PWQ0 Putative membrane protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWQ0_9GAMM Length = 1054 Score = 47.2 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 1/110 (0%) Query: 74 MQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVT-ATG 132 Q +++ + + ++++L + + +A + P+T Sbjct: 22 QQKAITRLESKLDNLQKQLADVMATVYILSSEAKPSSTQQSASDIRQNQPVTKPITDPIT 81 Query: 133 EPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPP 182 + + Q P S P P P + P++ S + PPTA P PP Sbjct: 82 QSISQAPVSAPLPVPLPTLNSLPMANTLDASTSSAPPTATPPSVNDAAPP 131 >UniRef50_C6N554 Exported membrane protein n=3 Tax=Legionella RepID=C6N554_9GAMM Length = 465 Score = 47.2 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 56/400 (14%), Positives = 119/400 (29%), Gaps = 58/400 (14%) Query: 40 GNGETVAEQEPVPDMTGVVDTTFDDKVRQ--HATTEMQVTAAQMQKQYEEIRRELDVL-- 95 G + + ++ + + F+D +R + + ++ Q + + + L Sbjct: 29 GPSQAAESKADPNNLNEAISSQFNDNIRDVSARLVQTEQKMRAIEIQNKTLAEKNAELTA 88 Query: 96 ----------NKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGP 145 + + +E L ++ A L E G + G+ + PG Sbjct: 89 SKEEGGVVIRQELAPEVVETMEALKKELAQLKESQTPQGDSERYPLGQIASNGLLTAPGA 148 Query: 146 EGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEG 205 + N + P + + + K ++ Sbjct: 149 VYDID--NQLMKHPLSEQEV-----------SYWNKLNARRKQIQKSVVKKSKKIMPSQE 195 Query: 206 KQGPSLPY--IPSGS-FAKAMLIEGADANASVTGN-ESTVPMQLRITGLVEM--PNSKTY 259 ++ +PY IP+GS L+ + G + I ++ N Sbjct: 196 EKETDIPYYTIPAGSDLGNTTLLSALIGEVPIDGKLMQPLFPFSAIISRGDLMASNGVPL 255 Query: 260 --DATGCFVGLEAWG------DVSSERAIVRTRNISCLKDGKTIDM-------------- 297 D +G + A G ++S RA V + + +DG + + Sbjct: 256 PPDISGMKISGYAIGVGSFLDNISCARAYVTSVLFT-FQDGHFVVVGKDQMSNSVDLVNN 314 Query: 298 PIKGHVS-FRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAV-GLGATAAY 355 G+++ G I G+ ++L G G+G + + G A Sbjct: 315 ESLGYLTTAYGNPCIHGKYYTNAPRVLMAMMATGGAQGVGNALSQWQMTYFAGPNGATAA 374 Query: 356 GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGA 395 G GG S+ D+ KR + ++ + A Sbjct: 375 PTGSFGPYAAGGALSEGTAKGGDWLEKRIQGSFDMVFVPA 414 >UniRef50_C9M9B5 Conjugal transfer protein TrbI n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9B5_9BACT Length = 396 Score = 46.4 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 63/423 (14%), Positives = 116/423 (27%), Gaps = 54/423 (12%) Query: 3 SINTIVKRKQY--LWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 + N +++ +++ G + A+ ++ G+ V T Sbjct: 7 NHNEYQEKQPLSKRIRYVIIFGIM-ILFAAVAVAISMSKGHFRAADAPTAVKATTA--TP 63 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 KV + Q A + K+ + V+ Q + N Sbjct: 64 PEPSKVPSNVEAPAQNKAVEEAKEEPPQVQAPQVIYYQAPAPRVG-------NYRKNAYT 116 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 L + +T S G Q ++ G P A + GN Sbjct: 117 VRLASAGTASTISTFGSNGQSGNGGGQAQQANPGDLTNLLAGLGGENPAAAGWRGNA--- 173 Query: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIP----------SGSFAKAMLIEGA-- 228 P PN RK +G PY+P +GS +LI G Sbjct: 174 ---------PDPNGWNRKAEFMKQGLPEDYSPYLPQAPVTPYELKAGSVIPCVLISGLNS 224 Query: 229 DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVS--SERAIVRTRNI 286 D ++ S ++ +P G V +S R +V + + Sbjct: 225 DLPGNIVAQVSEDVYDTATGRILLIP-------RGSRVVGAYDSQISYGQSRVLVVWQRL 277 Query: 287 SCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPA 346 +G ++ + G G G+KG V ++ A + + ++ Sbjct: 278 -LYPNGVSVKIDNMGATDQSGYTGLKGGVNRHWNSVITSALMVSLLGAGVDIIAPKTKDD 336 Query: 347 VGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDG 406 + + A + IKR P I + G T+ + Sbjct: 337 ----NRDETDPKSKVLENAAASVADAMSQI----IKREVDRQPTIKVKPGYRCTIFVKQD 388 Query: 407 FQL 409 L Sbjct: 389 MTL 391 >UniRef50_A7FC40 Conjugal transfer protein TrbI n=1 Tax=Yersinia pseudotuberculosis IP 31758 RepID=A7FC40_YERP3 Length = 459 Score = 46.4 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 45/330 (13%), Positives = 94/330 (28%), Gaps = 27/330 (8%) Query: 91 ELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQ 150 +LD + + K + + A GA+ T T + + + Q Sbjct: 139 DLDRIKMAKLQQFEEAVKAKTTVSIPTLRDNATGADGATPTRDQTLARLEAVRRQIDQTQ 198 Query: 151 PGNTPVSFP-----PQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEG 205 + ++ QG+ + A G+G+ + R Sbjct: 199 NEDPTSAYKKRLQQLQGNGGMSGDNASSGGDGLATSSSNDIEQFAGTGVTDRWALNTKVE 258 Query: 206 KQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDA-T 262 I +G+ ++I G D + G + + P K Sbjct: 259 APRSPFE-IRAGAVVPGVMISGVNSDLPGQIMGQ--------VTQDVFDTPTGKHLLIPQ 309 Query: 263 GCFVGLEAWGDVS--SERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNG 320 G + DV+ ++ + + DGK +D+ G +G + +V Sbjct: 310 GTRLTGSYTSDVAFGQSAVMIAWQRMI-FPDGKALDIAAMPGADSAGYSGFRDQVNNHLF 368 Query: 321 KILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYY 380 +I A+ + G+ G+ + + A L +G + + Sbjct: 369 RIFSSAFL---LSGVTAGVTYSQGRNENSNGNNSPTASSALSEALGQQFGQVTAQMIAKN 425 Query: 381 IKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 + A P + I G ++ K Sbjct: 426 LNIA----PTLEIRPGYRFNIIVIKDMTFK 451 >UniRef50_Q0AD29 Conjugation TrbI family protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AD29_NITEC Length = 420 Score = 46.4 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 55/426 (12%), Positives = 109/426 (25%), Gaps = 42/426 (9%) Query: 12 QYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMT----GVVDTTFD---- 63 L L IV + ++ G +Y + N VAE P V + Sbjct: 2 NRLPLFIVGGIVSISVLGIVYTFYDRQNQNMSKVAEGPQPPVTEISLPPVKPGDYSPPEP 61 Query: 64 ---DKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 + TE T + +Q + EE + + ++E + Sbjct: 62 LPIEMGSTGIPTEGTNTPSPLQSELEESENRRRTIQRIEERKLAQLESALSSESQAQNFS 121 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGV-- 178 N T P P + + G G Sbjct: 122 VRSTRNDTTNIANNDPLAPIRTAINNAAMAEKQVIANNGINENETDDSLYGLNAGIGGLG 181 Query: 179 TPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-----------IPSGSFAKAMLIEG 227 + + +++++ F N + L + + +G+ ++I G Sbjct: 182 SNSGIINTSMASDNRQLEKQAFLSNTPEAITYLQHQRRAAVAASREVKAGTIIPGVMISG 241 Query: 228 A--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRN 285 D + + +P G + G ERA+V Sbjct: 242 LNSDLPGQIIAQVRENVYDSATGNTLLIPAG--ARLVGIYDSNVTLGQ---ERALVGWER 296 Query: 286 ISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP 345 I DG +I + G G +V ++ G Q + S Sbjct: 297 II-YPDGSSISLDRMPGSDVAGYAGFNDQVNNHYWRLFGHGILLSVFTAGIQLSQPKSTN 355 Query: 346 AVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQD 405 +Y + ++ +G + ++ + P + + G V+ Sbjct: 356 N------NSYSSQQIVAGALGQQMGQIGMRMAQRNMN----IQPTLEVRPGYTFNVMITK 405 Query: 406 GFQLKT 411 L Sbjct: 406 DIILPP 411 >UniRef50_Q93894 Protein M03B6.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q93894_CAEEL Length = 642 Score = 45.6 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 61/161 (37%), Gaps = 3/161 (1%) Query: 56 GVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAA 115 + T++ ++ + +Q + E R +++V K + +++ ++L ++ Sbjct: 273 QNILQTYEQTLQTKELLTRRKQLEVLQTELTEQRMKIEVQKKMEEELRKKEKQLEEEKQQ 332 Query: 116 LAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPG 175 + +++K +N ++ G P+ PA P + Q N P +A P P Sbjct: 333 MEQRLKEQLSNWHSSFGPNQPRPPAPLPT---DLQLENLGYPPSPPAPLAQPTPAPAVSE 389 Query: 176 NGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPS 216 N PP + S +R+ + P + S Sbjct: 390 NTDEPPAFIVASSHERKLTEERENLVEQQMMPVPPPAKLSS 430 >UniRef50_UPI00006CE94C YEATS family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CE94C Length = 497 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 13/192 (6%) Query: 32 YLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRE 91 Y + ++ + D V+ ++ + + + K+ E++++E Sbjct: 300 YYDWKQHYLKFDAQDHKQKLDDALVVIKEQ--NEKTKMDLEKCDKDIEALNKEIEQLQKE 357 Query: 92 LDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGE------PVPQMPASPPGP 145 D+ K+ ++Q+ ++ Q + Q N + P Q+ + P P Sbjct: 358 QDLKQKKLLEEQQLQQQQQQQQSQDGNQFSYPTPNFQNPQSQSQINEFPNEQIRSIPSTP 417 Query: 146 EG-EPQPGNTPV---SFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFT 201 + QP N P+ + PPQ PP YP P Q P P + + Sbjct: 418 SNIQQQPPNIPIQNIAPPPQMQNQYNPPNQ-YPMGQPPAAPMPQQQGPPPPLNMMPNSYA 476 Query: 202 RNEGKQGPSLPY 213 + PY Sbjct: 477 PPNPNIKMNNPY 488 >UniRef50_A6GUS3 Conjugation TrbI family protein n=2 Tax=Bacteria RepID=A6GUS3_9BURK Length = 467 Score = 45.6 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 55/379 (14%), Positives = 108/379 (28%), Gaps = 29/379 (7%) Query: 37 DMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLN 96 ++S + + VPD+ G T+ +TA+ + Sbjct: 113 ELSTSFSQPSITSGVPDLGGAASNALATASTSGKTSVPNLTASAATQPLA------QKSQ 166 Query: 97 KQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPV 156 + ++QRR ++ + L + KA A + +P + P Sbjct: 167 AELMEEQRREQEKQRRAQELDQAKKANLAASGFGGAQQAGAVPMPVSSNNFQQSAMQLPG 226 Query: 157 SFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IP 215 P + A+ Q + P K+ P PY + Sbjct: 227 LTPGMQNNALN-----NDDQNRQADKQQFLKDQKTPLDTDYSSSV----KKAPRSPYEVK 277 Query: 216 SGSFAKAMLIEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGD 273 +G+ A++I G D V + + +P G + +G Sbjct: 278 AGAVIPAVMIGGINSDLPGQVIAQVKENVYDSKTGQHLLIP--LGSRLIGLYDSSVTYGQ 335 Query: 274 VSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVD 333 ER ++ + +G + ++ G G EV K+ G A + Sbjct: 336 ---ERVLLAWNRVI-FPNGDSFNLQGMPGADKAGYAGFFDEVDNHYFKVFGNAILMSIIS 391 Query: 334 GIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPI 393 Q + + + G + +G + A T++ + P + I Sbjct: 392 AGVQ-ISQPNNGGNGNNTNQGPSVSQTVGAALGQQIGQTALTITQKNLN----IQPTLKI 446 Query: 394 GAGNEVTVVFQDGFQLKTV 412 G E V+ L Sbjct: 447 RPGYEFNVMVTADMILPPP 465 >UniRef50_C7Z9F5 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7Z9F5_NECH7 Length = 638 Score = 45.2 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 6/160 (3%) Query: 39 SGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQ 98 S + A + +++ E + T + Q++ E +R +L + Sbjct: 439 SSPPKAQAPNNDAQRKAEI--DAETQRLKAMVAEEERQTREREQQEENERKRIQKMLEDE 496 Query: 99 RGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSF 158 + +RR ++ ++ L + G + T P P PP P+ N Sbjct: 497 DKERRRREAEIDKETERLRREYGMDGQDFANQTS-PTNTSPRLPPRPQFASGALNVSPGL 555 Query: 159 PPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRK 198 PP+ + P P + N PPPQ + P P+ RK Sbjct: 556 PPRPNSVGPTPNSPPQANYFAPPPQ---HAQPGPSGDGRK 592 >UniRef50_UPI0000E495BC PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E495BC Length = 2645 Score = 45.2 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 42/198 (21%), Positives = 64/198 (32%), Gaps = 16/198 (8%) Query: 35 DVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQ-----HATTEMQVTAAQMQKQYEEIR 89 + E+ A PV VV + DK RQ + + Q+Q+Q ++ Sbjct: 312 FIKKPAPMESTAAPTPVQSTPIVVTSELSDKDRQEQDMRQSLISKRQELFQIQQQ--RLK 369 Query: 90 RELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMP-ASPPGPEGE 148 EL+ + R + Q A +Q+ L AN A EP+ +P S PGP + Sbjct: 370 LELEQTKARLELQARELAAKTQALADQEKQISQL-ANKSQAPNEPISVLPTTSVPGPATK 428 Query: 149 PQPGNTPVSFPPQGSVAVPP-PTAFYPGN------GVTPPPQVTYQSVPVPNRIQRKVFT 201 P ++ G + P A PG G PP + Sbjct: 429 PAGASSTAGLGLLGEAPIQNFPPAPGPGGLLGFAPGTHAPPGMRSTPPLASQAPATAANL 488 Query: 202 RNEGKQGPSLPYIPSGSF 219 N GP + Sbjct: 489 SNVSASGPVQSQASRNTI 506 >UniRef50_B4JS72 GH18674 n=2 Tax=Drosophila RepID=B4JS72_DROGR Length = 630 Score = 44.8 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 3/154 (1%) Query: 42 GETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGD 101 T + P + + K+R+ + + A +K + D + Sbjct: 157 SPTGKDPTPTQRKEKRISPQ-EQKLRKATEQTARKSPADKEKPLRRHKPSPDASEAKPKL 215 Query: 102 DQRRIEKLGQDNAALAEQVKALGANPV-TATGEPVPQMPASPPGPEGEPQPGNTPVSFPP 160 ++ ++ ++K ++ + P P P P +P P +P S P Sbjct: 216 TKQGSKQKSPSPTKPTSKLKQQVSSESEIKSMSPTPAAQVKQPSPVKQPSPEPSPKSNAP 275 Query: 161 Q-GSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPN 193 + S P P +PPP SV Sbjct: 276 KSPSPKEKPAPVVEPVKQPSPPPTTAASSVATTE 309 >UniRef50_Q210W5 Conjugation TrbI-like protein n=28 Tax=Alphaproteobacteria RepID=Q210W5_RHOPB Length = 411 Score = 44.5 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 88/281 (31%), Gaps = 22/281 (7%) Query: 140 ASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKV 199 +P P TP S P + AV P P + + + + R+ Sbjct: 151 FAPTNTRELPPIVPTPASATPPEASAVLNPLPQPPADSTFAQNGQDRKLAFINASVDRRT 210 Query: 200 FTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQLRITGLVEMPNSK 257 + + S + +G+ LI G D +T S + +P + Sbjct: 211 TSPDRLAAPASPYVVQAGTVIPGALITGIRSDLPGLITAQVSENVYDSPSGKFLLIP--Q 268 Query: 258 TYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVM 317 G + A+G R ++ + + +GK+I + + G G++ EV Sbjct: 269 GARLIGQYDSQVAFGQ---SRVLLVWTRLI-MPNGKSIVLERQPGADTAGYAGLEDEVDN 324 Query: 318 RNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLS 377 G + A + + + G+ D + I G S++ + Sbjct: 325 HWGALFKAAMLSTLLSVGSE--------------VGTSGSEDDVVQAIRRGGSQSFNQVG 370 Query: 378 DYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 + R P + I G V V+ L + A + Sbjct: 371 QRVVSRNLDIQPTLTIRPGFPVRVIVNRDLVLAPYNQEAAK 411 >UniRef50_C1F4R5 Putative conjugal transfer protein, TrbI family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4R5_ACIC5 Length = 453 Score = 44.1 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 66/439 (15%), Positives = 126/439 (28%), Gaps = 51/439 (11%) Query: 11 KQYLWLGIVVVGTASAIGGALYLSDVDMSGNGET---------VAEQEPVPDMTGVVDTT 61 K + +LGI ++ +A+ + + + A + V Sbjct: 34 KPWFYLGIALLVIVAAVFSSTGKKAATQKTSSQQASMPLLQDNTANNQKELKSDAVAAEQ 93 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDV----------LNKQRGDDQRRIEKLGQ 111 ++ + T Q+ + + G Q ++ Q Sbjct: 94 SMEQSNESMADPAPETMTPAQQAAASVYSPNGEPAPCAPGQPCAQQASGYMQGQLSPAQQ 153 Query: 112 DNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVP---- 167 + LA + + L A+ + P P P N PQ A Sbjct: 154 EAQQLAAKDRELSYESRFASNLVYTRAPVKPSHNASSPALANGAGVTGPQQGTASSLTVQ 213 Query: 168 --PPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLI 225 + P + +R + P + Y G+ +L+ Sbjct: 214 RRAESGRIAPQSAPDPAITSSAPGEQARTARRPEVDIDSAVGKPYVIY--EGTTLDTVLM 271 Query: 226 EGADANASVTGNESTVPMQLRITGLVEMPNSKTYDA-TGCFVGLEAWGDVSSERAIVRTR 284 + +A P++ ++ V + + G V EA S E R Sbjct: 272 NRLNGDA-------PGPVKALVSNPVYSHDRQHVLIPAGTVVLGEARAIGSPEIGHQRRM 324 Query: 285 NISCLK----DGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME 340 + + DG ++D+ + G G+KG+V KI G + G + G GQ E Sbjct: 325 ALVFHRMIMPDGYSVDLDQFLGLGQSGAVGVKGKVNNHYLKIFGTSIALGVIAGAGQIEE 384 Query: 341 RASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVT 400 G + G S++A ++ D ++ P I + G + Sbjct: 385 G--------GGIISTSGSQAFATGASANISQSATSVLDRFLDIP----PTITVREGQRIK 432 Query: 401 VVFQDGFQLKTVEEMALER 419 V F L + + Sbjct: 433 VYFTQDLLLPAYNRHRIPQ 451 >UniRef50_C1CP01 Pneumococcal surface protein A n=75 Tax=Streptococcus pneumoniae RepID=C1CP01_STRZT Length = 724 Score = 43.7 bits (101), Expect = 0.016, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 58/179 (32%), Gaps = 23/179 (12%) Query: 63 DDKVRQHATTEMQVTAAQMQKQYEEIRREL----------------DVLNKQRGDDQRRI 106 D+ ++ E+ A ++Q + ++ +E+ L + + + Sbjct: 357 DELDKEAEEAELDKKADELQNKVADLEKEISNLEILLGGADSEDDTAALQNKLATKKAEL 416 Query: 107 EKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPE-GEPQPGNTPVSFPPQGSVA 165 EK ++ A ++ G T P P+ PA P PE P P + P+ Sbjct: 417 EKTQKELDAALNELGPDGDEEETPAPAPQPEQPAPAPKPEQPAPAPKPEQPAPAPKPEQP 476 Query: 166 VPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAML 224 P P P P + T P + K + G Y GS A L Sbjct: 477 APAPKPEQPAKPEKPAEEPTQPEKPATPKTGWK------QENGMWYFYNTDGSMATGWL 529 >UniRef50_A8PDB5 Predicted protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8PDB5_COPC7 Length = 419 Score = 43.7 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 71/204 (34%), Gaps = 30/204 (14%) Query: 51 VPDMTGVVDTTFDDKVRQHA---------TTEMQVTAAQMQKQYEEIRRELDVLNKQRGD 101 V D T ++ +++ + ++++ + ++ + +E+R+E L Q D Sbjct: 80 VSDKTNAINAQLRERLEKTEGEYDDLRGRVSKVEDANSWLKDENKELRQENKTLRTQLDD 139 Query: 102 DQRR---IEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSF 158 +RR I++L ++ + L E++ + +P SPP QP S Sbjct: 140 LKRRFATIDELQKNVSTLTERLDCM-----------LPPKDGSPPTVPPPQQPSCNHHSS 188 Query: 159 PPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGS 218 PPQ PP + TP QVT + + P +P S Sbjct: 189 PPQPLHTNPPGNGSQTNHAPTPQLQVTRLP-------DLPPQGPPQVQPTPPPQILPQNS 241 Query: 219 FAKAMLIEGADANASVTGNESTVP 242 L + S+ P Sbjct: 242 SQSGDLTGQPTPPQQIVPQSSSHP 265 >UniRef50_B6H463 Pc13g07600 protein n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6H463_PENCW Length = 759 Score = 42.5 bits (98), Expect = 0.031, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 53/215 (24%), Gaps = 8/215 (3%) Query: 35 DVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDV 94 G+ +P PD V+ + A Q E++R Sbjct: 225 GGQKPPQGQKGQPAKPSPD--PVIQMLATRAAADPELKALMRVVASSQASQEQLRAFQAH 282 Query: 95 LNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQ---- 150 +++ + R ++ + ++ + + + E P Sbjct: 283 IDELNAIIKSREQQEQRQQSSAGQPLAQQPTPTSQTQTQKQQDSGTKSVSLEKSPPTSQT 342 Query: 151 PGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPS 210 P P + P P PP T + + Sbjct: 343 PSKGSKQSPVKTEAQPQTPAQAPPSQTPKPPESATGSGTIKEEQSGTEHSGPRPAPSEAG 402 Query: 211 LPYIPSGSFAKAMLIEGADANASVTGN--ESTVPM 243 P +P+ S A A+AS + P+ Sbjct: 403 RPVVPAQSATPGASSTPAPASASQQQTPVANPTPL 437 >UniRef50_Q6CC43 YALI0C12617p n=1 Tax=Yarrowia lipolytica RepID=Q6CC43_YARLI Length = 383 Score = 41.8 bits (96), Expect = 0.057, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 2/160 (1%) Query: 50 PVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKL 109 V D V+D DD A + + + EE + + K+ + + Sbjct: 195 TVEDEDDVIDNAIDDGNEDTAPKQPTTEEEEAELPEEEQIKRMMAEMKKEAGVDDGADSV 254 Query: 110 GQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNT--PVSFPPQGSVAVP 167 + L+ + ++ A+ ++ + + + PP P NT P G VA P Sbjct: 255 DPFDKRLSPKEVSIHASKALSSHDNDDPLSSIPPAPPTFLPEDNTPPAPPSNPPGDVAPP 314 Query: 168 PPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQ 207 PT P V+ P ++ + V + + K Sbjct: 315 KPTLPSPQRKVSSPAKIVAKPVDPKTVLDEDALIKQAQKH 354 >UniRef50_A2CDD9 Proline-rich region n=2 Tax=Prochlorococcus marinus RepID=A2CDD9_PROM3 Length = 253 Score = 41.8 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 44/237 (18%), Positives = 76/237 (32%), Gaps = 21/237 (8%) Query: 6 TIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDK 65 +++ WLG ++VG A+G + + + GN + +Q P + Sbjct: 13 QKNRKRPRFWLGPLLVGGCFALGYGMTQRIMILRGNTQQPQQQSFGPTPLPFPGERLEGL 72 Query: 66 VRQH--ATTEMQVTAAQMQKQYEEIRRELDVLNKQR----------------GDDQRRIE 107 R+H + ++Q A + + R+ + KQ + Q + Sbjct: 73 RRRHGGSNADLQADVAAKEAKITAKRKTKEQAEKQAKQQAEKLAAAAALRREQELQAIRQ 132 Query: 108 KLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEP--QPGNTPVSFPPQGSVA 165 D+A AL A + A P PA P P+ +P P + + P Sbjct: 133 ATETDSADPGLADPALAAPELPAPINPQGTRPAQPVAPKPKPARTPASDSLGRPTPPQPV 192 Query: 166 VPPP-TAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAK 221 P P A P + P P P + P P+ P F + Sbjct: 193 APKPKPARTPASDSLGRPTPPQPVAPKPKPSSTPASDFLRRRDSPQRPHSPVSDFLR 249 >UniRef50_B5E3T5 Surface protein PspC n=11 Tax=Streptococcus pneumoniae RepID=B5E3T5_STRP4 Length = 769 Score = 41.4 bits (95), Expect = 0.082, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 61/188 (32%), Gaps = 13/188 (6%) Query: 39 SGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQ 98 G +V + + + T+ K+ + + +Q + +ELD KQ Sbjct: 437 EGKKPSVPDINQEKEKAKLAVATYMSKILDD--IQKHHLQKEKHRQIVALIKELDEFKKQ 494 Query: 99 RGDDQRRIE---KLGQDNAALAEQVKALGANPVTATGEPVPQMPASP------PGPEGEP 149 + + ++ + + A+ + P+ P + PG + P Sbjct: 495 ALSEIDNVNTKVEIENTVHKIFADMDAVVTKFKKGLTQDTPKEPDNKKPSAPKPGMQPSP 554 Query: 150 QPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGP 209 QP S P Q P+A P G+ P PQ + VP + + + K Sbjct: 555 QPEGKKPSVPAQPGTEDKKPSA--PKPGMQPSPQPEGKKPSVPAQPGTEDKKPSAPKPDM 612 Query: 210 SLPYIPSG 217 P G Sbjct: 613 QPSPQPEG 620 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P41067 Protein traB n=45 Tax=root RepID=TRAB1_ECOLI 484 e-135 UniRef50_B3WTP8 Protein TraB n=4 Tax=Enterobacteriaceae RepID=B3... 331 4e-89 UniRef50_B6ICF4 TraB protein n=1 Tax=Escherichia coli SE11 RepID... 326 1e-87 UniRef50_D0Z576 IncF plasmid conjugative transfer pilus assembly... 320 6e-86 UniRef50_A4WGS4 TraB pilus assembly family protein n=4 Tax=Enter... 316 2e-84 UniRef50_Q8D6A1 ATPase involved in DNA repair n=5 Tax=Vibrionale... 314 4e-84 UniRef50_B2VB09 TraB protein n=1 Tax=Erwinia tasmaniensis RepID=... 312 2e-83 UniRef50_A9L6K3 TraB pilus assembly family protein n=8 Tax=Gamma... 301 3e-80 UniRef50_C9NPU6 IncF plasmid conjugative transfer pilus assembly... 298 3e-79 UniRef50_C5F1X5 Sex pilus assembly protein n=1 Tax=Helicobacter ... 296 2e-78 UniRef50_A8QYQ1 TraB protein n=2 Tax=Legionellaceae RepID=A8QYQ1... 286 2e-75 UniRef50_A1WDF7 TraB pilus assembly family protein n=2 Tax=Burkh... 279 1e-73 UniRef50_B2I3Y9 TraB pilus assembly family protein n=1 Tax=Acine... 277 6e-73 UniRef50_A7H3G6 Sex pilus assembly protein n=3 Tax=Campylobacter... 276 2e-72 UniRef50_B4RLS1 TraB n=9 Tax=Neisseria RepID=B4RLS1_NEIG2 275 3e-72 UniRef50_Q8L277 Pilus biogenesis protein n=4 Tax=Bacteria RepID=... 273 1e-71 UniRef50_A0B4M9 TraB pilus assembly family protein n=1 Tax=Burkh... 272 1e-71 UniRef50_C4NUW9 TraB n=11 Tax=Gammaproteobacteria RepID=C4NUW9_E... 271 4e-71 UniRef50_A1W656 TraB pilus assembly family protein n=6 Tax=Betap... 270 8e-71 UniRef50_C5ANX7 TraB pilus assembly family protein n=2 Tax=Burkh... 270 1e-70 UniRef50_Q0F360 TraB pilus assembly n=1 Tax=Mariprofundus ferroo... 269 1e-70 UniRef50_A5KZF6 ATPase involved in DNA repair n=1 Tax=Vibrionale... 269 2e-70 UniRef50_D0SGY7 TraB pilus assembly family protein n=1 Tax=Acine... 265 3e-69 UniRef50_Q1MY41 TraB pilus assembly n=1 Tax=Bermanella marisrubr... 262 1e-68 UniRef50_B7XGQ7 Putative pilus assembly protein n=2 Tax=Pseudomo... 262 2e-68 UniRef50_C3NU45 IncF plasmid conjugative transfer pilus assembly... 259 1e-67 UniRef50_A4JTP2 TraB pilus assembly family protein n=2 Tax=Burkh... 259 1e-67 UniRef50_Q5ZTS2 Putative conjugative transfer protein TraB n=1 T... 257 6e-67 UniRef50_C1MEJ9 Pilus biogenesis protein n=1 Tax=Citrobacter sp.... 257 8e-67 UniRef50_Q5NX52 Sex pilus assembly protein n=1 Tax=Aromatoleum a... 255 2e-66 UniRef50_D2U0R2 Conjugative transfer pilus assembly protein TraB... 254 4e-66 UniRef50_B4EQI2 Putative TraB conjugative transfer protein n=1 T... 253 1e-65 UniRef50_C5SIK4 TraB pilus assembly family protein n=1 Tax=Astic... 248 3e-64 UniRef50_Q2LTZ2 Pilus assembly protein n=1 Tax=Syntrophus acidit... 243 1e-62 UniRef50_A3VN24 Putative conjugative transfer factor, TraB n=1 T... 243 1e-62 UniRef50_Q6MBA0 Putative F pilus assembly protein traB n=1 Tax=C... 242 2e-62 UniRef50_Q5WSC0 Putative uncharacterized protein n=2 Tax=Legione... 238 3e-61 UniRef50_C0QUX1 TraB pilus assembly family protein n=1 Tax=Perse... 237 7e-61 UniRef50_B3EB62 TraB pilus assembly family protein n=3 Tax=Prote... 230 8e-59 UniRef50_C4Z000 Putative TraB pilus assembly n=1 Tax=Rickettsia ... 230 1e-58 UniRef50_A4XE89 TraB pilus assembly family protein n=6 Tax=Sphin... 229 2e-58 UniRef50_B7J829 Conjugal transfer protein, putative n=1 Tax=Acid... 229 2e-58 UniRef50_Q2N5I1 Pilus assembly protein n=5 Tax=Erythrobacter Rep... 225 3e-57 UniRef50_C4K0M3 F pilus assembly protein TraB n=13 Tax=Rickettsi... 222 2e-56 UniRef50_D0Z4T3 TraB pilus assembly n=1 Tax=Photobacterium damse... 220 6e-56 UniRef50_C1SHE3 TraB pilus assembly protein n=1 Tax=Denitrovibri... 217 9e-55 UniRef50_Q3IUW6 Putative conjugative transfer factor, TraB n=1 T... 211 5e-53 UniRef50_A0R7R0 TraB pilus assembly family protein n=1 Tax=Pelob... 208 2e-52 UniRef50_A0L342 TraB pilus assembly family protein n=1 Tax=Shewa... 202 3e-50 UniRef50_B0RL09 TraB pilus assembly family protein n=2 Tax=Yersi... 198 2e-49 UniRef50_Q19NS7 ThrB n=10 Tax=Enterobacteriaceae RepID=Q19NS7_ECOK1 178 5e-43 UniRef50_A5IEK4 Exported membrane protein n=4 Tax=Legionella Rep... 177 1e-42 UniRef50_A9AU14 Putative uncharacterized protein n=1 Tax=Burkhol... 177 1e-42 UniRef50_C7N9P2 Conjugation TrbI family protein n=1 Tax=Leptotri... 172 2e-41 UniRef50_Q4QPC9 Conserved putative exported protein n=5 Tax=Haem... 169 2e-40 UniRef50_Q5ZWU4 Exported membrane protein n=4 Tax=Legionella pne... 168 5e-40 UniRef50_C6DZ83 Conjugation TrbI family protein n=1 Tax=Geobacte... 157 9e-37 UniRef50_D0SZZ2 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 151 4e-35 UniRef50_A5TXL6 Possible conjugal transfer protein TrbI n=3 Tax=... 148 6e-34 UniRef50_A9MS59 Putative uncharacterized protein n=3 Tax=Enterob... 147 7e-34 UniRef50_C2LLI8 Exported protein n=20 Tax=Proteobacteria RepID=C... 145 5e-33 UniRef50_C6N554 Exported membrane protein n=3 Tax=Legionella Rep... 144 8e-33 UniRef50_C3WX80 Conjugal transfer protein TrbI n=3 Tax=Fusobacte... 141 5e-32 UniRef50_B1ZQ46 Putative uncharacterized protein n=2 Tax=Opitutu... 140 1e-31 UniRef50_B3DV88 Type IV secretory pathway, VirB10 component n=1 ... 140 1e-31 UniRef50_C3WYE2 Conjugal transfer protein TrbI n=2 Tax=Fusobacte... 139 2e-31 UniRef50_B3CUL3 Putative conjugative transfer protein TraB n=1 T... 125 3e-27 UniRef50_B4W818 Bacterial conjugation TrbI-like protein n=2 Tax=... 118 4e-25 UniRef50_D2U001 Conjugal transfer pilus assembly protein TraB (F... 111 4e-23 UniRef50_C4YZI3 F pilus assembly protein TraB n=1 Tax=Rickettsia... 97 2e-18 UniRef50_A5CDW0 Conjugative pilus assembly protein n=23 Tax=Orie... 80 1e-13 UniRef50_D2W236 FH2 domain-containing protein n=2 Tax=Naegleria ... 74 9e-12 UniRef50_B4U0L4 Emm-like cell surface protein CspZ.2 n=2 Tax=Str... 65 9e-09 Sequences not found previously or not previously below threshold: UniRef50_B0UVR9 Putative uncharacterized protein n=7 Tax=Pasteur... 135 4e-30 UniRef50_C3WQ31 Conjugal transfer protein trbI n=4 Tax=Fusobacte... 120 1e-25 UniRef50_D0FVW8 Conserved uncharacterized protein n=6 Tax=Entero... 115 6e-24 UniRef50_C9M9B5 Conjugal transfer protein TrbI n=1 Tax=Jonquetel... 112 4e-23 UniRef50_Q0AD29 Conjugation TrbI family protein n=1 Tax=Nitrosom... 111 5e-23 UniRef50_C5F2I1 Conjugal transfer protein trbI n=1 Tax=Helicobac... 111 5e-23 UniRef50_A8PL27 TrbI n=1 Tax=Rickettsiella grylli RepID=A8PL27_9... 111 6e-23 UniRef50_D2L4F3 Conjugation TrbI family protein n=1 Tax=Desulfov... 108 4e-22 UniRef50_B9K3A4 Conjugal transfer protein n=1 Tax=Agrobacterium ... 108 4e-22 UniRef50_P54917 Conjugal transfer protein trbI n=21 Tax=Rhizobia... 108 4e-22 UniRef50_B4S3J0 Conjugation TrbI family protein n=2 Tax=Prosthec... 108 6e-22 UniRef50_D2LK45 Conjugation TrbI family protein n=3 Tax=Rhodomic... 107 1e-21 UniRef50_A1U889 Putative uncharacterized protein n=1 Tax=Marinob... 106 1e-21 UniRef50_A1TQT7 Putative uncharacterized protein n=2 Tax=Comamon... 106 2e-21 UniRef50_Q5P8M1 Putative uncharacterized protein n=1 Tax=Aromato... 106 2e-21 UniRef50_A6GUS3 Conjugation TrbI family protein n=2 Tax=Bacteria... 106 3e-21 UniRef50_Q210W5 Conjugation TrbI-like protein n=28 Tax=Alphaprot... 105 3e-21 UniRef50_D0L1C0 Conjugation TrbI family protein n=1 Tax=Halothio... 105 4e-21 UniRef50_A9L6S0 Conjugation TrbI family protein n=1 Tax=Shewanel... 105 4e-21 UniRef50_A8PLK4 Mating pair formation protein TrbI n=1 Tax=Ricke... 104 6e-21 UniRef50_A5IH56 Conjugal transfer protein trbI n=3 Tax=Legionell... 103 1e-20 UniRef50_A1W7X8 Putative uncharacterized protein n=33 Tax=Proteo... 102 3e-20 UniRef50_A3VPP6 Conjugal transfer protein trbI n=1 Tax=Parvularc... 101 5e-20 UniRef50_C6XNV6 Conjugation TrbI family protein n=4 Tax=Alphapro... 100 1e-19 UniRef50_C6N225 Conjugal transfer protein trbI n=1 Tax=Legionell... 99 2e-19 UniRef50_C5SQN8 Conjugation TrbI family protein n=1 Tax=Asticcac... 100 2e-19 UniRef50_B1ZGL7 Conjugation TrbI family protein n=39 Tax=Bacteri... 99 3e-19 UniRef50_A3EW14 Putative conjugal transfer protein (TrbI) n=2 Ta... 98 5e-19 UniRef50_Q6AIG3 Probable conjugal transfer protein TrbI n=1 Tax=... 98 6e-19 UniRef50_D1AYI6 Conjugation TrbI family protein n=2 Tax=Streptob... 98 7e-19 UniRef50_Q1NCN7 Conjugal transfer protein trbI n=1 Tax=Sphingomo... 97 1e-18 UniRef50_B0T9T7 Conjugation TrbI family protein n=1 Tax=Caulobac... 97 1e-18 UniRef50_Q3JDD1 Putative uncharacterized protein n=4 Tax=Gammapr... 97 1e-18 UniRef50_C6BT47 Conjugation TrbI family protein n=1 Tax=Desulfov... 96 2e-18 UniRef50_B5ZFY5 Conjugation TrbI family protein n=3 Tax=Gluconac... 96 2e-18 UniRef50_A7HU77 Conjugation TrbI family protein n=1 Tax=Parvibac... 95 4e-18 UniRef50_B0T9F9 Conjugation TrbI family protein n=1 Tax=Caulobac... 95 5e-18 UniRef50_Q1ZJS8 Putative uncharacterized protein n=1 Tax=Photoba... 94 1e-17 UniRef50_A7FC40 Conjugal transfer protein TrbI n=1 Tax=Yersinia ... 94 1e-17 UniRef50_A5V2M5 Conjugation TrbI family protein n=1 Tax=Sphingom... 90 1e-16 UniRef50_B0T8R0 Conjugation TrbI family protein n=2 Tax=Caulobac... 90 1e-16 UniRef50_D1EBX3 TrbI protein n=1 Tax=Neisseria gonorrhoeae SK-92... 90 2e-16 UniRef50_C7I5U4 Conjugation TrbI family protein n=2 Tax=Thiomona... 90 2e-16 UniRef50_C6NY89 TrbI protein n=1 Tax=Acidithiobacillus caldus AT... 90 2e-16 UniRef50_A1VQ87 Conjugation TrbI family protein n=1 Tax=Polaromo... 89 3e-16 UniRef50_B8H104 Conjugal transfer protein trbI n=6 Tax=Alphaprot... 88 7e-16 UniRef50_C6XER7 Conjugation TrbI family protein n=1 Tax=Methylov... 87 1e-15 UniRef50_B9QRF5 Bacterial conjugation TrbI-like protein n=2 Tax=... 85 7e-15 UniRef50_B9NX79 Conjugal transfer protein TrbI n=1 Tax=Rhodobact... 81 1e-13 UniRef50_C5SHI4 Conjugation TrbI family protein n=1 Tax=Asticcac... 80 2e-13 UniRef50_B5ZFJ3 Conjugation TrbI family protein n=2 Tax=Alphapro... 79 5e-13 UniRef50_B9ZQ82 Conjugation TrbI family protein n=1 Tax=Thioalka... 79 5e-13 UniRef50_D1LZG9 TrbI n=1 Tax=Rhizobium leguminosarum bv. viciae ... 78 5e-13 UniRef50_Q1M9N3 Putative conjugative DNA transfer protein n=1 Ta... 78 6e-13 UniRef50_C1F4R5 Putative conjugal transfer protein, TrbI family ... 78 7e-13 UniRef50_B6A5A6 Conjugation TrbI family protein n=1 Tax=Rhizobiu... 77 2e-12 UniRef50_Q11ZI3 Conjugation TrbI-like protein n=1 Tax=Polaromona... 76 2e-12 UniRef50_C6BQE4 Conjugation TrbI family protein n=1 Tax=Ralstoni... 76 2e-12 UniRef50_A9HQ52 Putative conjugation TrbI-like protein n=1 Tax=G... 76 2e-12 UniRef50_Q0FXR1 Type IV secretion system protein B10, putative n... 75 5e-12 UniRef50_A1VV08 Conjugation TrbI family protein n=39 Tax=cellula... 75 6e-12 UniRef50_A8LT13 Conjugation TrbI family protein n=16 Tax=Rhodoba... 73 2e-11 UniRef50_Q5NV40 Conjugation TrbI-like protein n=6 Tax=Burkholder... 73 3e-11 UniRef50_A1WSV0 Conjugation TrbI family protein n=2 Tax=Proteoba... 70 2e-10 UniRef50_P17800 Protein virB10 n=16 Tax=Rhizobiales RepID=VIRBA_... 70 2e-10 UniRef50_B9JPS7 Type IV secretion protein n=1 Tax=Agrobacterium ... 69 3e-10 UniRef50_D1UHI4 Conjugation TrbI family protein n=1 Tax=Burkhold... 69 4e-10 UniRef50_A9M4S9 Hypothetical conjugal transfer protein n=1 Tax=V... 69 5e-10 UniRef50_A1VV44 Conjugation TrbI family protein n=1 Tax=Polaromo... 68 8e-10 UniRef50_C6RJZ0 VirB10 protein n=1 Tax=Acinetobacter radioresist... 68 9e-10 UniRef50_Q120E4 Conjugation TrbI-like protein n=1 Tax=Polaromona... 67 1e-09 UniRef50_A3U3E8 Type IV secretion system protein B10, putative n... 66 2e-09 UniRef50_B6JK51 Conjugal transfer protein n=3 Tax=Rhizobiales Re... 66 2e-09 UniRef50_A5PCI8 Conjugation TrbI-like protein n=1 Tax=Erythrobac... 66 3e-09 UniRef50_D1ATB8 Type IV secretion system protein VirB10 n=6 Tax=... 65 5e-09 UniRef50_C6BRC6 Conjugation TrbI family protein n=2 Tax=Ralstoni... 65 5e-09 UniRef50_B5ERV7 Conjugation TrbI family protein n=2 Tax=Acidithi... 65 8e-09 UniRef50_A3W6C8 Type IV secretion system protein B10, putative n... 63 2e-08 UniRef50_Q49KE9 TraF n=1 Tax=Pseudomonas putida RepID=Q49KE9_PSEPU 63 2e-08 UniRef50_C8S1Z6 Conjugation TrbI family protein n=1 Tax=Rhodobac... 63 2e-08 UniRef50_Q3C0D3 Type IV secretion system protein VirB10 n=3 Tax=... 62 5e-08 UniRef50_Q2NC51 Type IV secretion system protein B10, putative n... 61 7e-08 UniRef50_A4V6Q9 Putative TraB-family protein n=1 Tax=Pseudomonas... 61 9e-08 UniRef50_D1TIV7 Conjugation TrbI family protein n=1 Tax=Burkhold... 61 1e-07 UniRef50_A2UVZ7 Putative uncharacterized protein n=1 Tax=Shewane... 60 1e-07 UniRef50_B2UU21 ComB3 protein n=7 Tax=Helicobacter pylori RepID=... 60 2e-07 UniRef50_B4RFV2 Type IV secretory pathway, VirB10 component n=1 ... 60 3e-07 UniRef50_D1RHP0 Legionella vir-like protein LvhB10 n=1 Tax=Legio... 59 3e-07 UniRef50_A6D5G1 Probable conjugal transfer protein TrbI n=1 Tax=... 59 5e-07 UniRef50_Q5ZW40 LvhB10 n=5 Tax=Legionella pneumophila RepID=Q5ZW... 58 8e-07 UniRef50_B6D4X3 Conjugation TrbI family protein (Fragment) n=36 ... 58 1e-06 UniRef50_Q2GD29 Type IV secretion system protein VirB10 n=3 Tax=... 57 1e-06 UniRef50_A4JUI8 Conjugation TrbI family protein n=6 Tax=cellular... 55 6e-06 UniRef50_A8PMY5 IcmE protein n=1 Tax=Rickettsiella grylli RepID=... 55 8e-06 UniRef50_B4SNC4 Conjugation TrbI family protein n=4 Tax=Bacteria... 55 9e-06 UniRef50_B7KCN2 Putative uncharacterized protein n=2 Tax=Cyanoth... 54 1e-05 UniRef50_A5FU46 Conjugation TrbI family protein n=1 Tax=Acidiphi... 54 1e-05 UniRef50_A9HSY7 Putative conjugal transfer n=1 Tax=Gluconacetoba... 54 1e-05 UniRef50_Q46705 TraF protein n=9 Tax=root RepID=Q46705_ECOLX 54 1e-05 UniRef50_B8GZI0 Type IV secretory pathway, VirB10 channel protei... 53 2e-05 UniRef50_A0P1U3 COMB3 n=1 Tax=Labrenzia aggregata IAM 12614 RepI... 52 4e-05 UniRef50_B9D151 VirB10 n=1 Tax=Campylobacter rectus RM3267 RepID... 50 2e-04 UniRef50_C1CP01 Pneumococcal surface protein A n=75 Tax=Streptoc... 50 2e-04 UniRef50_Q7WDT6 Type IV secretion system protein ptlG homolog n=... 50 3e-04 UniRef50_Q0KKK7 VirB10 type IV secretion protein n=1 Tax=Plasmid... 49 4e-04 UniRef50_B6JNK3 VirB10 type IV secretion protein n=9 Tax=Helicob... 48 7e-04 UniRef50_A9KDM0 IcmE n=7 Tax=Coxiella burnetii RepID=A9KDM0_COXBN 48 7e-04 UniRef50_A9IYG1 Vbh10 protein n=2 Tax=Bartonella RepID=A9IYG1_BART1 48 9e-04 UniRef50_A8GMU9 VirB10 protein n=15 Tax=Rickettsia RepID=A8GMU9_... 48 9e-04 UniRef50_UPI00017C3087 PREDICTED: similar to diaphanous 1 n=1 Ta... 47 0.001 UniRef50_Q93894 Protein M03B6.3, confirmed by transcript evidenc... 47 0.002 UniRef50_UPI00006CE94C YEATS family protein n=1 Tax=Tetrahymena ... 45 0.006 UniRef50_Q8VQ55 Pneumococcal surface protein A (Fragment) n=21 T... 45 0.006 UniRef50_A2CDD9 Proline-rich region n=2 Tax=Prochlorococcus mari... 45 0.007 UniRef50_A9SY51 Predicted protein n=2 Tax=Physcomitrella patens ... 45 0.008 UniRef50_C1F5S5 Putative conjugal transfer protein, TrbI family ... 43 0.019 UniRef50_A2DXB4 Formin Homology 2 Domain containing protein n=1 ... 42 0.047 UniRef50_A4YUF3 Putative uncharacterized protein n=1 Tax=Bradyrh... 42 0.048 >UniRef50_P41067 Protein traB n=45 Tax=root RepID=TRAB1_ECOLI Length = 475 Score = 484 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 475/475 (100%), Positives = 475/475 (100%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT Sbjct: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV Sbjct: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP Sbjct: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 Query: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST 240 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST Sbjct: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST 240 Query: 241 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK 300 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK Sbjct: 241 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK 300 Query: 301 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV 360 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV Sbjct: 301 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV 360 Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT 420 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT Sbjct: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT 420 Query: 421 QSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQGGGNDGK 475 QSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQGGGNDGK Sbjct: 421 QSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQGGGNDGK 475 >UniRef50_B3WTP8 Protein TraB n=4 Tax=Enterobacteriaceae RepID=B3WTP8_ECOLX Length = 454 Score = 331 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 214/461 (46%), Positives = 283/461 (61%), Gaps = 24/461 (5%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLS-DVDMSGNGETVAEQEPVPDMTGVVD 59 MA++N IV+R+Q +V+G + G +S + EP PDMTGVV+ Sbjct: 1 MANVNKIVRRRQLALFIALVLGIGAGGAGTWMVSEMNLKKAPPAKAPKGEPAPDMTGVVN 60 Query: 60 TTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQ 119 +FD+KV++ A E Q + Q + +++R E+ ++ + Q RI +L +N L Q Sbjct: 61 QSFDNKVQRSAIAEAQRLNKETQAEIKKLRTEMGIIGRDLKGSQERIRELEDENKLLQTQ 120 Query: 120 VKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVT 179 ++A G N + + EP+P AS + + V PPT F+P G Sbjct: 121 IEA-GKNFDSLSAEPLPGALASQGKAAVQ--------------AGEVLPPTTFWPAGGGQ 165 Query: 180 PPPQVTYQSVPVPNRIQRKVFT-RNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNE 238 P V P + + FT + Q P P+I SGSFA+A+++EGADANASVTG++ Sbjct: 166 APVAPVMTPVQRPGMMDSQEFTLPDTTPQKPRFPWISSGSFAEAIVVEGADANASVTGDK 225 Query: 239 STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMP 298 +TVPMQLR+TG V+MPN + +D TGCFV LEAWGDVSSERAIVRTR+ISC ID Sbjct: 226 NTVPMQLRLTGKVQMPNDQEFDLTGCFVTLEAWGDVSSERAIVRTRSISCKLGDDNIDQK 285 Query: 299 IKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAG 358 I GHVSF GKNGIKGEVVMRNG+IL +A G+GF+DGIG+G+E+AS VG+GATA+ AG Sbjct: 286 IAGHVSFMGKNGIKGEVVMRNGQILLYAGGSGFLDGIGKGIEKASSTTVGVGATASMSAG 345 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 ++ + G+GGG S AA+TLSDYYIKRAEQYHPVIPIGAGNEVT+VFQDGFQL+T+EE + Sbjct: 346 EIGQAGLGGGVSSAAKTLSDYYIKRAEQYHPVIPIGAGNEVTLVFQDGFQLETLEEARAK 405 Query: 419 RTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLN 459 R + S P NT MLK L + Sbjct: 406 AAARRKQNQPSASSAPAAMPG-------NTTDMLKHLQDFR 439 >UniRef50_B6ICF4 TraB protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF4_ECOSE Length = 448 Score = 326 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 194/427 (45%), Positives = 253/427 (59%), Gaps = 16/427 (3%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 MA++N +V+RKQ L + ++ +G ++ GA Y+S V SG ++ P P+MTGVV Sbjct: 1 MANVNQLVRRKQNLRMAVIALGISAVGAGAWYMSTVKSSGKAAQTQQKAPPPNMTGVVSQ 60 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 TFD KV A ++Q TA++ +K+ + L + ++ D + +IE+ + A L + Sbjct: 61 TFDKKVSDAAVADIQHTASEAEKKLKAFESRLAKMEQREQDYRAKIEEQENELAILRAEQ 120 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 +A+ N P P G+P P S P + A P N + P Sbjct: 121 EAMKENG-------------GPELPAGQPVPSFGTGSSVPPPT-AFYQPGGGGEANNLAP 166 Query: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQ--GPSLPYIPSGSFAKAMLIEGADANASVTGNE 238 Q P V + P LPYIPS SFA A++IEGADANASVTGN Sbjct: 167 VTQYQVTPQPKKGLSSMTVDYGEKSAVSDKPLLPYIPSASFAPAVVIEGADANASVTGNS 226 Query: 239 STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMP 298 PMQ R+TGLV MPN KTYD TGC V A+GD+SSERA++RT +SC K+G IDMP Sbjct: 227 DPSPMQFRLTGLVRMPNDKTYDLTGCMVTAGAYGDISSERALIRTDRLSCHKNGHVIDMP 286 Query: 299 IKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAG 358 KGHVSF+GKNGIKGE VMRNGKI+GWA+ AG VDGIG G+ + Q G GA A+ Sbjct: 287 FKGHVSFKGKNGIKGEPVMRNGKIIGWAFAAGAVDGIGSGVAKIGQETPGAGAVASVSGS 346 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 V+ +GGGAS+ +TLSDYYIKRAEQYHPVIP+GAG EVTVVFQ+GFQLK +E Sbjct: 347 TVMNGALGGGASQVGKTLSDYYIKRAEQYHPVIPVGAGTEVTVVFQEGFQLKYTDEDKAS 406 Query: 419 RTQSRAE 425 +A+ Sbjct: 407 TPARQAK 413 >UniRef50_D0Z576 IncF plasmid conjugative transfer pilus assembly protein TraB n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z576_LISDA Length = 457 Score = 320 bits (820), Expect = 6e-86, Method: Composition-based stats. Identities = 116/458 (25%), Positives = 187/458 (40%), Gaps = 26/458 (5%) Query: 25 SAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQ 84 G L ++ P PD V+ F DK + A Q T ++K Sbjct: 2 LLFFGLCGLVFWLINKP--KETFVPPSPDFEPVITEDFTDKDAKSALQAQQRTIIALEKS 59 Query: 85 YEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPG 144 E+++E L++Q R+E+ DN+ E+ + L N + A + P++ Sbjct: 60 VSELKKERQRLSEQVATGLDRLEQRLNDNS---EETERLINNNLDAFRDSATTDPSNSVT 116 Query: 145 PEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNE 204 P +P P P + + + P T + + + + Sbjct: 117 PSLDPFGSLDQYPQVP------TAPRGYLDDHSLKDIPTTTRRGIQTFS-YRWPKMASET 169 Query: 205 GKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGC 264 + S Y+P+GSF A+L+ ADANA V T P+ R +PN K C Sbjct: 170 TYRRTSDNYVPTGSFVTAVLMGAADANAGVNAQGDTAPIVFRTIHEGILPNGKRSRIKDC 229 Query: 265 FVGLEAWGDVSSERAIVRTRNISCL--KDGK--TIDMPIKGHVSFRGKNGIKGEVVMRNG 320 FV +G++SS R I R +SC+ +DG+ +D+P++G +NG++G VMRNG Sbjct: 230 FVTASVYGEISSNRGIARLNRMSCIFDEDGEEDILDIPVRGTAFSFARNGMRGTPVMRNG 289 Query: 321 KILGWAWGAGFVDGIGQGMERASQPAV--GLGATAAYGAGDVLKMGIGGGASKAAQTLSD 378 KI+ A +G G+G + AS + G + L G L+D Sbjct: 290 KIIQMAGISGLFTGLGDTAKNASSSTITGPSGVVSTVDPSKALLNMGGSALENIGSKLAD 349 Query: 379 YYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAEEDN-----PESPV 433 YYIK AEQYHP+I + G+ V +VF +GF L + E+ S E + Sbjct: 350 YYIKLAEQYHPIIELNPGSVVNLVFLEGFPLDPLMRDGYEQRLSAQEVPQSVGDMASQLM 409 Query: 434 PVPPSAESHLNGFNTDQMLKQLG---NLNPQQFMSGSQ 468 + + T+ + +QL QF + +Q Sbjct: 410 TNMMNPLAAQPTLPTNPLKQQLSAQLQQKANQFDATTQ 447 >UniRef50_A4WGS4 TraB pilus assembly family protein n=4 Tax=Enterobacteriaceae RepID=A4WGS4_ENT38 Length = 466 Score = 316 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 178/467 (38%), Positives = 265/467 (56%), Gaps = 20/467 (4%) Query: 3 SINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTF 62 + N +R Q L V+ A+ GG ++ + + P+MTGVV +F Sbjct: 4 NENLKTRRTQLAVLATVIAVGAATAGGVMWYGN---HQEQQKHPAPVAAPNMTGVVTASF 60 Query: 63 DDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKA 122 +++V A + Q + +++QY + + ++ + + ++++ + + L +QV+ Sbjct: 61 NEQVNDAALAQQQAKTSALEQQYATLAQ---LVAQNKLTTEQKLAEKDAEIQRLTDQVQK 117 Query: 123 LGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPP 182 + T + P P P P + PP+ SV P A G Sbjct: 118 APGSNTTTGQQSPPAGQNGTPLP----GPVAAGQARPPEYSVTPNAPAATGVNMGQGAGF 173 Query: 183 QVTYQSVPVPNRIQRKVFTRNEGKQGPSL-PYIPSGSFAKAMLIEGADANASVTGNESTV 241 + + F+ + K+ P+ P+IPSGSF+ A++IEGADANASVTG ++T Sbjct: 174 YPGGSGQRLTGGLSTTKFSYDSLKKKPTKLPWIPSGSFSDAVMIEGADANASVTGQQNTS 233 Query: 242 PMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIK 300 P+ LR+ G ++MPN+K Y A GCF+ E WGD+SSER VRT++ISC+ K+GK +DM + Sbjct: 234 PVTLRLQGNIQMPNNKEYSADGCFIVGEIWGDISSERGTVRTQSISCVLKNGKHVDMEFQ 293 Query: 301 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV 360 GHVS++GKNGI+G+ VMRNG I+G+A AG + G G+G++ A+ P+VGLGATA GAGDV Sbjct: 294 GHVSYQGKNGIRGKPVMRNGMIVGYAGAAGMLSGFGEGIKSAATPSVGLGATADVGAGDV 353 Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALER- 419 K G GGGA+KAA TLS Y+IKRAEQYHPVI IGAGN+VTVVFQ GF+L+T+E+ + Sbjct: 354 FKQGFGGGANKAADTLSQYWIKRAEQYHPVIDIGAGNQVTVVFQKGFRLETLEDAEDAKA 413 Query: 420 ----TQSRAEEDNPESPVPVP---PSAESHLNGFNTDQMLKQLGNLN 459 ++ N SP P S + + N D +L+Q L Sbjct: 414 KEELQKAGNAAQNAVSPQPASQSTTSGTASVGNINPDDVLRQASQLR 460 >UniRef50_Q8D6A1 ATPase involved in DNA repair n=5 Tax=Vibrionales RepID=Q8D6A1_VIBVU Length = 493 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 112/477 (23%), Positives = 199/477 (41%), Gaps = 22/477 (4%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTT 61 IN + ++ +A + + + QEPV + +++ Sbjct: 21 GEINQRTASRNNTV--TIIAVSALLLAALALYKYTRPPPPTQKESHQEPV-EFGAIIEQD 77 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAAL-AEQV 120 F + Q A + Q T + ++KQ ++ + + + + +R+IE+ + A L EQV Sbjct: 78 FVETDNQSALSLQQKTLSALEKQIADLTKSMRT---HKEETERKIEQAKEKTARLVEEQV 134 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQ-----PGNTPVSFPPQGSVAVPPPTAFYPG 175 + N + ++ + S G +PP Sbjct: 135 REEFRNKEAQLQSRIDELEHNTSELVNTEPYSTIHTQRPMNSSETFGQHKLPPRPIASSN 194 Query: 176 NGVTPPPQVTYQSVPVP-NRIQRKVF-----TRNEGKQGPSLPYIPSGSFAKAMLIEGAD 229 N S +P NR + F + + Y+P+G+F A++ GAD Sbjct: 195 NNPDMAQMQYQPSEQIPFNRNEFDSFNFFWESDETTYHRTTENYVPTGTFVTAVVTGGAD 254 Query: 230 ANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL 289 NA V G T P+ + +PN + + C + ++G++SS R I+RT +SC+ Sbjct: 255 TNAGVLGQGDTTPVVFQTIHEGILPNGEKSKLSNCTITGSSYGEISSSRGIIRTNRLSCI 314 Query: 290 KD-GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME--RASQPA 346 +D G +D+ IKG G+NGI+G +++NG+I+ A AG ++GIG+ + + Sbjct: 315 QDEGHILDVAIKGTAFNFGRNGIRGTTILKNGEIVQMAGIAGILNGIGETGQALSQTTST 374 Query: 347 VGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDG 406 G T++ + D +G S + LSDYYI AE YHP++ I G V +VF +G Sbjct: 375 SAFGTTSSINSQDAALNLLGNATSSVGEKLSDYYIGLAELYHPIVEINPGAVVNIVFLEG 434 Query: 407 FQLKTVEEMALERTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQF 463 F L + ER Q + + +S + + LN ++ Q + P F Sbjct: 435 FPLDPLMAEEYERQQLAEQSMSSQSNQILDVITNAPLNPL-AKELSTQGIEVPPTPF 490 >UniRef50_B2VB09 TraB protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB09_ERWT9 Length = 457 Score = 312 bits (798), Expect = 2e-83, Method: Composition-based stats. Identities = 170/473 (35%), Positives = 248/473 (52%), Gaps = 38/473 (8%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 M +IN + KRKQ L V++ S G +YL+ D + + Q ++GVV Sbjct: 1 MGNINMLTKRKQLATLIGVLIA-GSVGAGIVYLTAGDSKPAAQAIKPQSAP--VSGVVTN 57 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 F ++V++ + Q A ++K+ +++++++ + D L V Sbjct: 58 AFTEQVQKSVLQQQQERTAVLEKELDDLKKQV----------SNQPSGESADVQVLKATV 107 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 AL N + + G G V + QGS + P F G G Sbjct: 108 DALLKNQKASAEQN-----------NGAHAVGEPEVKWNVQGSNSYSSPPVFPVGQGGNN 156 Query: 181 PPQVTYQSVPVPNRIQRKVFTRNEGK-QGPSLPYIPSGSFAKAMLIEGADANASVTGNES 239 P IQ F+ K +G LP+I SGSF A +IEGADANASVTG +S Sbjct: 157 YVPPKNDPRPQIGGIQHTSFSWEHPKVKGNPLPWISSGSFINASMIEGADANASVTGQQS 216 Query: 240 TVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISC-LKDGKTIDMP 298 + P+ + G +PN Y+ C V E +GD+SSER VRT +ISC + + +DMP Sbjct: 217 STPVVFTLLGNASLPNGHKYNLDQCRVTGEIYGDISSERGEVRTDHISCNISGDRHVDMP 276 Query: 299 IKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAG 358 KGHVS++GK GI+G+ VMRNGKI+ +A AG + G+G G+ + +VG+GATA AG Sbjct: 277 FKGHVSYQGKEGIRGKPVMRNGKIIAYAGAAGVLSGLGSGISESGTTSVGIGATATPAAG 336 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 ++ + GGGASKAA TLS Y+IKRAEQYHPVI IGAGN VTVVFQ+GFQL T+E+ Sbjct: 337 EIARQAFGGGASKAADTLSQYWIKRAEQYHPVIDIGAGNAVTVVFQEGFQLTTIEDEIAR 396 Query: 419 RTQSRA------------EEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLN 459 +++S A +D + +PPS + H N D ++++ +L+ Sbjct: 397 KSESAAGQVVDKVAGNMSADDGARTLSSLPPSGQQHGAIINPDDVIRKAKDLD 449 >UniRef50_A9L6K3 TraB pilus assembly family protein n=8 Tax=Gammaproteobacteria RepID=A9L6K3_SHEB9 Length = 509 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 125/474 (26%), Positives = 216/474 (45%), Gaps = 28/474 (5%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTT 61 +++N K++ ++ G+ + + + A P+ D V+D Sbjct: 20 SALNEANKKRNWVIAGVGATVLGALYLA--GDAYMSAPKRAPETAAGNPI-DFGAVIDKD 76 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNA-----AL 116 F +K Q A T Q+ + QK +++ + ++ + + ++ +++ + + Sbjct: 77 FTEKDNQSALTAQQIALDKQQKAIDKMLKSMEAIERSNEANRLDLKRNLETFQLTVSEKI 136 Query: 117 AEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGN 176 +++ A AN + + V S G + P + G +PP + G Sbjct: 137 DDKINAATANAMQHSNNNV-TDEFSTQGIDASAYPVRQSTRY--LGEQTLPPRPSVGDGQ 193 Query: 177 GVTPPPQVTYQSVPVPNR------IQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADA 230 + P Q P + + +N K+ Y+P+GSF A++ GADA Sbjct: 194 SYSAPYQGGAIPPPATQNGIDSFALNWESPDQNLPKKRTPENYVPAGSFVTAVVTGGADA 253 Query: 231 NASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK 290 NA V G TVPM + T +PN K C V A+G++SS R IVRT +SC+ Sbjct: 254 NAGVNGQGDTVPMVFQTTNQGVLPNGKPSKLNNCTVLGAAYGEISSSRGIVRTTRLSCIF 313 Query: 291 DGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME--RASQPAVG 348 + + ID+P++ V G+NGI+G +M+NGKI+ A +G + GIG+ + + Sbjct: 314 EDEIIDIPVEATVFNYGRNGIRGTAIMKNGKIVQMAGISGILTGIGETGKALSQTTSNSA 373 Query: 349 LGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 LG+T++ D L G +S L+DYYIK AEQYHP+I + GN V +VF GF Sbjct: 374 LGSTSSVNGADALLNLAGSASSSVGSKLADYYIKLAEQYHPIIELNPGNTVNIVFLKGFP 433 Query: 409 LKTVEEMALERTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQL-GNLNPQ 461 L V E ++ ++ P SA + + ++ +L+Q+ GN+ PQ Sbjct: 434 LDPVGIQEYEEALAQQAQN--------PVSATAQILNTISNPLLEQMPGNIKPQ 479 >UniRef50_C9NPU6 IncF plasmid conjugative transfer pilus assembly protein TraB n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU6_9VIBR Length = 462 Score = 298 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 120/454 (26%), Positives = 182/454 (40%), Gaps = 36/454 (7%) Query: 7 IVKRKQYLWLGIV-VVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDK 65 I KR ++ ++ V+ A I ++ ++ D A P ++D F D Sbjct: 24 IAKRNTWVSASVIGVLAIAGIIVAWVFRTESDHP------ATLSPPLHFEHIIDPGFTDL 77 Query: 66 VRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGA 125 +Q A + + +Q I+ +L + KQ + +E+ Q AL Sbjct: 78 DQQSALAHQDLALQALTQQLTGIQEQLKQVQKQSERQSKELERKLQHLEALGVPSDTHEL 137 Query: 126 NPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVT 185 T + +P PA P EP S P Q ++ P P N Sbjct: 138 TLGTPSSQPALPSPAVTPSLSLEP-------SSPTQATLEADTPWLEEPTNMNM------ 184 Query: 186 YQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQL 245 P + + K Y+PSGSF AM+ GAD NA V TVP+ Sbjct: 185 ----PRYHSVDFIWSAPPVKKHVSLKTYVPSGSFVTAMVTGGADTNAGVLAQGDTVPLVF 240 Query: 246 RITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIKGHVS 304 + +PN + C + A+G+VSS R +VRT ISC+ DG ID +KG Sbjct: 241 QTLNRGILPNGQPSRLDQCTITASAYGEVSSSRGVVRTDKISCVLDDGTLIDQAVKGTAF 300 Query: 305 FRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAV--GLGATAAYGAGDVLK 362 G+NGI+G +++NG I+ A AG + G+G+ + S+ LGAT + Sbjct: 301 NFGRNGIRGTTLLKNGDIVQMAGLAGILTGLGETGKALSEHTTLHPLGATQTLKSDQAPL 360 Query: 363 MGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQS 422 +G + LSDYYIK AE YHP++ I G V +VF +GF L + + + Sbjct: 361 NLLGHAGATVGAKLSDYYIKLAETYHPIVEINPGTVVNIVFLEGFTLTPLNQSGAQEVAP 420 Query: 423 RAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLG 456 + PP L+Q G Sbjct: 421 QTSR---------PPHTLGQPPINPLADELRQEG 445 >UniRef50_C5F1X5 Sex pilus assembly protein n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F1X5_9HELI Length = 443 Score = 296 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 101/436 (23%), Positives = 187/436 (42%), Gaps = 20/436 (4%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTT 61 + ++++ L+LG+ ++ + SGN + ++ V T Sbjct: 20 SDDTETKQKRKILFLGVAILVILVFVFLIF-------SGNSNSETNAINDKNIGNFVLTD 72 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVK 121 D+ VR + +K+ + + LN + ++ + L + ++ + Sbjct: 73 KDENVRTNWIGSAAEDLELSKKKIDSLSITNQRLNTELETLKKTVGNLVTNKEKKEKESQ 132 Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPP 181 + + P P+ P + + T P T Sbjct: 133 S------SNIETPKNVTLNGIELPDLGNVNLYKDFPKPNESNNFGLEKTGEVPPIQETYE 186 Query: 182 PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTV 241 + P+ + + ++ YIP+GSF K +L+ G DA + + Sbjct: 187 ERTRALENPLVFNNHAQRTIQEVKEEAKEKHYIPTGSFVKVVLLNGVDAPTMTQAKTNPL 246 Query: 242 PMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIK 300 P+ +R+ +PNS YD CF+ E +GD++SERA +RT +SC+ DG+ I++ K Sbjct: 247 PVLMRVVDTSVLPNSWQYDIKDCFITGEGYGDLTSERAYIRTNTLSCMANDGRHINLDFK 306 Query: 301 GHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAA----- 354 G V GK G+KG VV + G +L AGF+ G+G+ + + G+ Sbjct: 307 GAVSGEDGKIGLKGRVVTKQGALLARTLIAGFLQGVGESFGQQDTTTIVSGSGTTTVPLD 366 Query: 355 YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 A + + G+ G S +A+ L+D+Y+K A+Q PVI I AG E+TV+ D ++K++EE Sbjct: 367 QTANEAFQQGLFQGLSDSAEKLADFYLKMADQISPVIEISAGREITVITTDLTEIKSIEE 426 Query: 415 MALERTQSRAEEDNPE 430 A + T + ++ N + Sbjct: 427 EAKKSTSNNTKQPNTK 442 >UniRef50_A8QYQ1 TraB protein n=2 Tax=Legionellaceae RepID=A8QYQ1_9GAMM Length = 457 Score = 286 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 134/479 (27%), Positives = 209/479 (43%), Gaps = 47/479 (9%) Query: 1 MAS--INTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVV 58 MA+ N +K +Q L V I + L G+ + + D+TG+V Sbjct: 1 MANWQFNKKIKGRQVRTLVGVGCIVFFIIATMIVL---LAEGHPKKTTTTKNSVDLTGIV 57 Query: 59 DTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAE 118 + +F D V A T Q ++KQ E+ + + + + ++ A E Sbjct: 58 EESFTDAVADQALTTQQTELESLKKQISELTQNIKTMGEAH----------QKELQAQKE 107 Query: 119 QVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGV 178 ++ A V A E + E + P PQ + P T Y N + Sbjct: 108 ELTAQVHELVLANQEKQSHL-------EHQNNPSELNEVQNPQ--LWHNPNT--YAMNTM 156 Query: 179 TPPPQVTYQSVPVPNRIQRKVFTRNEGKQGP----SLPYIPSGSFAKAMLIEGADANASV 234 + P + + + R + Y+PS + +A+++ GADA+ASV Sbjct: 157 MNSGTTLSDAAPRIHTVSFRPKRRMKKPHPNFYLNPAHYVPSNTSVRAVILGGADADASV 216 Query: 235 TGNE-STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGK 293 G + M + +PN + GC V ++GD+SSERA +SC G+ Sbjct: 217 NGQSKNNGVMLFKFLEDGTLPNGQRSRLRGCRVSANSYGDISSERAFATLYRLSCAHPGQ 276 Query: 294 -TIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERAS--QPAVGLG 350 ID + G V F GK GIKG+ +MR+ K++ WA +G + G+ + A Q G Sbjct: 277 PIIDKEVTGWVFFNGKVGIKGKPLMRDNKVMTWAGVSGALSGVASAAQYAQSVQAIGPYG 336 Query: 351 ATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 AT+ + + GGASKAA TLS YY+KRAEQYHPVI +G+GN VTVVF+DGF L+ Sbjct: 337 ATSVVPSSQIAPFAAYGGASKAADTLSAYYVKRAEQYHPVIQVGSGNVVTVVFKDGFYLE 396 Query: 411 TVEEMA-----------LERTQSRAEEDNPESPV--PVPPSAESHLNGFNTDQMLKQLG 456 E+ + + ++++NP S + VPP + NT + G Sbjct: 397 PDEDKSQHAMNQVKAQHETQGLIASQDENPTSEMNFTVPPEVLGRIERLNTLNRNETGG 455 >UniRef50_A1WDF7 TraB pilus assembly family protein n=2 Tax=Burkholderiales RepID=A1WDF7_ACISJ Length = 449 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 92/428 (21%), Positives = 167/428 (39%), Gaps = 29/428 (6%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 M+ N K++Q + +G V G G ++L D +E ++ + Sbjct: 1 MSEPNAQTKKRQMMLIGGAVTGILGLAGAGMFLFDSGP------AQHREKPKTVS--ITA 52 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 + + + E++ +L +Q + +E+L + AA Sbjct: 53 PGTVDDKDAWRAQQAAKEKSNEALIGEVKTQLKAQEEQNKKLAQALEELKANKAAAGSAG 112 Query: 121 KALGANPVTAT-GEPVPQMPASPPGPEGEPQP---GNTPVSFPPQGSVAVPPPTAFYPGN 176 A A P + +P+P + PG P G P V VP Sbjct: 113 SATAAKPDASVLDKPLPIGNGTGPGQRVLQSPNGKGGATTLNQPLNQVDVPARREVEIIT 172 Query: 177 GVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQ--------------GPSLPYIPSGSFAKA 222 + + +V ++ ++ ++P+GSF + Sbjct: 173 FNNAEGKGAAGAAVGGAGGITEVLGFPTDEKAKKYGTTSGGADGKKQTIEFLPAGSFVRV 232 Query: 223 MLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVR 282 ++ G DA + +P+ + + + N D C + WGD+SSER + R Sbjct: 233 AMLNGVDAPTGGQAQSNPLPVAFHVLDVANLANKHKLDIKDCRIVAATWGDLSSERMMGR 292 Query: 283 TRNISCLKDGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMER 341 T ++C+ +G+ ++M IKG V GK G++G +V + G++L A AG + GIG+ + Sbjct: 293 TETLACVINGEAVEMAIKGQVIGEDGKAGVRGRLVTKQGQLLANALFAGALSGIGKAFQS 352 Query: 342 AS--QPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEV 399 ++ G G T + + IGGG A Q L+ YY+K A++ +PVI G V Sbjct: 353 SATITSTGGGGITQTIDPDKIGQAAIGGGVGSAGQQLAQYYLKAADKLYPVIETDGGRTV 412 Query: 400 TVVFQDGF 407 ++ G Sbjct: 413 EILITKGA 420 >UniRef50_B2I3Y9 TraB pilus assembly family protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Y9_ACIBC Length = 438 Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 90/412 (21%), Positives = 168/412 (40%), Gaps = 12/412 (2%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 + + N +K+KQ WL I+ + L+ SG+ + P+ V+ Sbjct: 7 LENPNDKLKKKQIKWLAILGTILFIIVAIFLF------SGSPPEETNKTQAPENAVNVEK 60 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 D + + + +KQ +++ + ++ Q + + + + + +A + Sbjct: 61 PGDAEEQDKWRQTAAIDQEAQKKQIDDLTQTVNSQVAQNDALKSELSIMNERISQIANRS 120 Query: 121 K-ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVT 179 + + A P + + + + + P G+ P P Sbjct: 121 ESRVVAQPTNTNPPNLGGIAGTSSAYPNKQGLHGQSILSDPNGTGIDPQTGERIPLPNNI 180 Query: 180 PPPQV--TYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGN 237 P + + T + ++ +IP GSF + ++I G DA Sbjct: 181 APVKTFGIIDMNKSIDEQGNTTSTSVKSQRPEKTTFIPDGSFVRVVMINGVDAPTGGQAQ 240 Query: 238 ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDM 297 +P+ + G +MPN+ + GC AWG++SSER ++ +C+ +G+T+ + Sbjct: 241 SDPIPVVFQTVGKFDMPNNYKMNIKGCRFVGAAWGELSSERVKATIQSGNCIINGQTVPI 300 Query: 298 PIKG-HVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQ--GMERASQPAVGLGATAA 354 IKG V GK GI+G VV + G+IL A A ++ IG G + LG Sbjct: 301 QIKGQVVGEDGKTGIRGRVVSKQGQILAKAALASAMEAIGGLYGSTVGTASQSALGTVRT 360 Query: 355 YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDG 406 ++ + +GG S A+ LSD+Y++RA PVI + AG + +V Q G Sbjct: 361 ISGSELKQAAVGGAISGGAEKLSDFYMQRANDLFPVIEVSAGRTLEIVVQQG 412 >UniRef50_A7H3G6 Sex pilus assembly protein n=3 Tax=Campylobacterales RepID=A7H3G6_CAMJD Length = 446 Score = 276 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 108/428 (25%), Positives = 181/428 (42%), Gaps = 25/428 (5%) Query: 6 TIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDK 65 ++ Q ++ G G L+L+ G+ +E V + V D Sbjct: 16 IDAQKNQNKNKVLIFTGIFVIAGALLFLAGG-----GDKKESKEKVGNFNLVQDDPMAKT 70 Query: 66 VRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGA 125 E +K+ + + + L+KQ D ++ I + ++N A + Sbjct: 71 RW---VGEASNDLTLAKKRVDSLDTRNEELSKQVSDLKKIITDMKKENDANKRNYELNLK 127 Query: 126 NPVTATGEPVPQMPAS--PPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQ 183 N + PA+ P + + P + + P+ + + P Sbjct: 128 NIQKTQKKATENTPATVLEDTPNNQEEDLYKNFPQPNKNTANAQKPSDYGLTHFGDVPEL 187 Query: 184 VTYQSVPVPNRIQRKVFT-------RNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTG 236 FT + + ++ + IP+GS KA+L+ G DA Sbjct: 188 NEVTQTRYTPIQDSLSFTNIAKPEEKEKVEKKSTRHVIPTGSIVKAVLLSGMDAPTMTQA 247 Query: 237 NESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD-GKTI 295 +P+ +++T L +PN YD CF+ E +GD++SERA +R NISC+ + G+ I Sbjct: 248 KTEPLPVLMKVTDLSILPNRWGYDVNECFLMGEGYGDLTSERAYIRVNNISCVTNKGQKI 307 Query: 296 DMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQ--PAVGLGAT 352 M +KG GK G++GEVV + G +L AGF+ G+G+G +Q G G T Sbjct: 308 YMAMKGAATGEDGKLGLRGEVVTKQGALLARTLIAGFLQGVGEGFANQNQIVTQNGFGGT 367 Query: 353 AA----YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 A L+ G G SK+A+ L+D+Y+K A+Q PVI I AG E+ ++ + Sbjct: 368 TTTNSNMSASATLQTGAFKGLSKSAEKLADFYLKMADQVSPVIEIAAGREINIITTATLE 427 Query: 409 LKTVEEMA 416 LKT+EE Sbjct: 428 LKTLEEQQ 435 >UniRef50_B4RLS1 TraB n=9 Tax=Neisseria RepID=B4RLS1_NEIG2 Length = 437 Score = 275 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 105/428 (24%), Positives = 185/428 (43%), Gaps = 21/428 (4%) Query: 7 IVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTT----F 62 +++Q G+V A+ +G A+Y+ + + + E Q + + Sbjct: 12 AARKRQLAIAGMVAGSMAAIVGSAIYVIEGNKKKSAEVTQVQNKRQILRTDFTSPQAGIT 71 Query: 63 DDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKA 122 D+ + + + A + + E + +EL K+ + + LG D + Sbjct: 72 DNSLWMNTESSKIEYANRKISELETMVQELK--EKENSSNPDTSKGLGPDGLGKPPAISG 129 Query: 123 LGANPVTATGEPVPQMPASPPGPEGE----------PQPGNTPVSFPPQGSVAVPPPTAF 172 +G N P +P P + + P + + Sbjct: 130 IGDNGRLPPAPPAGTLPNGAPPADRPIERKIVSGSMSEAELQPGTTGSVNTGNPNENVRV 189 Query: 173 YPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANA 232 P + + + ++GK YIPSG+F +++L+ G DA Sbjct: 190 SPQLKEAEWVKSKTPRMNIEVVEDGGKVVVSQGKFRARDSYIPSGTFFRSVLLGGVDAPT 249 Query: 233 SVTGN-ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-K 290 S P+ +R+T ++PN Y+ CFV +A+GD+SSERA +R +N+SC+ Sbjct: 250 GGEAQNASPHPVLMRVTDFAQLPNRFKYNFRECFVTGQAYGDISSERAYIRLQNLSCVGT 309 Query: 291 DGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA--SQPAV 347 DG+ IDMP+KG+V GK G++G +V + G++L A +G + G+G+G+ A Sbjct: 310 DGRAIDMPVKGYVAGEDGKTGVRGNLVTKQGQLLANALMSGVISGMGKGVSEAFKVTNNT 369 Query: 348 GLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGF 407 G+T + D + GI G AA L++YYIK A++ PV+ + AG +V VV G Sbjct: 370 AFGSTTSIRGSDQYRAGIASGIGGAADRLAEYYIKLADKVFPVVEVNAGRQVDVVLTQGI 429 Query: 408 QLKTVEEM 415 ++ T E Sbjct: 430 EIDTGETK 437 >UniRef50_Q8L277 Pilus biogenesis protein n=4 Tax=Bacteria RepID=Q8L277_PROVU Length = 452 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 101/443 (22%), Positives = 168/443 (37%), Gaps = 39/443 (8%) Query: 5 NTIVKRKQY-LWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFD 63 N K+K+Y LW G+ +V L L + + + + A +E V + V+ + Sbjct: 13 NLDAKKKRYALWAGLAIVIIP------LLLVIMPENSSPRSKATKEKV--IQNVLTDSDT 64 Query: 64 DKVRQHATTE----MQVTAAQMQKQYEEIRRELD--VLNKQRGDDQRRIEKLGQDNAALA 117 V Q+A + T + + + + LD LNK+ + + + L Sbjct: 65 TGVSQNAIAARLRSLDETIKSTKTAVDTLNKTLDPDALNKRLTNIENVQKNEAAARQTLN 124 Query: 118 EQVKALGANPVTATG---------EPVPQMPASPPGPEGEPQPGNTPVSFPPQG---SVA 165 ++ L NP ++ PQ S E +PQ S Q + Sbjct: 125 NRIDTLIKNPPASSTGGALNPKNVFAAPQDGQSGEAAENQPQNARATASGTLQSVYENDI 184 Query: 166 VPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGP-SLPYIPSGSFAKAML 224 P P+ F + SVP +Q+ + ++ + Y+P+ S + Sbjct: 185 APDPSDFDHSADASKSKNEAPASVPNIVTVQQDIKEEHDSDEDTGPETYLPATSIISGVF 244 Query: 225 IEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTR 284 I G DA + P +RI +PN D C + +GD+SSERA R+ Sbjct: 245 ISGMDAPTAQNARNDPYPALIRIKKDAILPNRFRVDIRECGMLAAGFGDLSSERAYFRSE 304 Query: 285 NISCLK-DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA 342 I+C++ DG + I + V GK G++G +V + G+ L A AGF+ Q Sbjct: 305 VITCIREDGAVFEASIDAYAVGEDGKAGVRGRLVTKQGQYLAKALTAGFLQAASQLFSVQ 364 Query: 343 SQPAVGLGATA---------AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPI 393 S P + + + ++ G A L+D+Y+K A PVI I Sbjct: 365 SIPTINVNRDGNSRGGSPYEQVMSSQAMQGAAISGVGGALNRLADFYMKMATDLFPVIEI 424 Query: 394 GAGNEVTVVFQDGFQLKTVEEMA 416 V V Q G LK + + Sbjct: 425 DPARSVDFVVQKGVSLKFNKVTS 447 >UniRef50_A0B4M9 TraB pilus assembly family protein n=1 Tax=Burkholderia cenocepacia HI2424 RepID=A0B4M9_BURCH Length = 440 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 103/432 (23%), Positives = 171/432 (39%), Gaps = 41/432 (9%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 M+ +N KR+Q I+ V + + G + VP + Sbjct: 1 MSDVNQATKRRQR----ILTVAGFAVLAGLFAVGMFFTQSGPANRQFTTKVP-----FTS 51 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 D R + Q E+ R + ++ + D +++ L + L++++ Sbjct: 52 LGDQNDRNAWRAH-------SEAQLAELTRRMSSIDSRADDAVSQMKALSKAQDELSKRI 104 Query: 121 KALGANPVTATGE----PVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVP------PPT 170 A+ + P +A + P P + PP G P P Sbjct: 105 DAMKSTPASAPAPASGATSDRAALDKPIPLNGAPAKTGAILNPPFGKSGKPGVDMAAAPP 164 Query: 171 AFYPGNGVTPP--------PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKA 222 TP P+ + + R Q+ N K+ + +IP SF + Sbjct: 165 KLAIIQFNTPTGNGADCVDPRYSSLPLDQATRAQQDCLKANGKKK---ISFIPGSSFVRV 221 Query: 223 MLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVR 282 ++ G DA +P+ L++ +PNS+ D T C + +A+GDVSSER +R Sbjct: 222 FMMNGVDAPTGGEAQHDPLPVFLQVLDPANLPNSRKLDITECRILTQAYGDVSSERTHMR 281 Query: 283 TRNISCL-KDGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME 340 + C+ K+G+T++MPIKG+V GK G++G +V + G L + AG GIGQ Sbjct: 282 GETLDCILKNGRTVEMPIKGNVMGEDGKEGVRGRLVSKAGSALAMSVFAGISSGIGQAFN 341 Query: 341 RASQP--AVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNE 398 +++ LG+T+ V + IG G S A L YYI+ AE+ PVI G Sbjct: 342 QSANTLSNTALGSTSIINPSQVGRAAIGSGVSGGADALKQYYIRTAEKLFPVIETDGGRI 401 Query: 399 VTVVFQDGFQLK 410 V G + Sbjct: 402 VEFAVTKGAEYD 413 >UniRef50_C4NUW9 TraB n=11 Tax=Gammaproteobacteria RepID=C4NUW9_ECOLX Length = 438 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 96/442 (21%), Positives = 176/442 (39%), Gaps = 38/442 (8%) Query: 5 NTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDD 64 +K+++ + V + + E QE + + +T Sbjct: 8 QLDPNKKRWVSIAGGVFVLFAVVTMF-----SGEPKKEEKRGRQETIKHVLTDKNTREIG 62 Query: 65 KVRQHATTEM-QVTAAQMQKQYEEIRRELDV----------LNKQRGDDQRRIEKLGQDN 113 A +M + ++K+ E +++EL+ + ++ ++ +++L Q N Sbjct: 63 IDSLSADVKMVSRENSDLKKELERVKKELEETKTTAGKSSDVGREMTRLRQDLDRLTQKN 122 Query: 114 AALAEQVKALGANPVTATGEPVPQMPASP---------PGPEGEPQPGNTPVSFPPQGSV 164 LA++V+ A T++ + + P + P S Sbjct: 123 MELAKKVETGAAGGKTSSSSEDARADVNGASGGDGQFMEKKLDYKDPASFFRDAPLPDSK 182 Query: 165 AVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAML 224 P T G T P + + + Q+ + + Y+PSGS +L Sbjct: 183 GGAPATGKGDGRDATKP------GIQIVSYSQKAPEVEEKDNKDDESIYLPSGSILTGVL 236 Query: 225 IEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTR 284 I G DA S P LRI +PN D CF+ + +GD+SSERA +R Sbjct: 237 INGMDAPTSQGARRDPFPSTLRIQKEAILPNRFRADVRECFLIVSGYGDLSSERAYLRGE 296 Query: 285 NISCLK-DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA 342 SC++ DG I+ + + V GK G++G VV + G+I+ + AGF+ G+ + + Sbjct: 297 TFSCVRDDGGVIEAKLDSYAVGEDGKAGVRGRVVSKQGQIIAKSLMAGFLGGVSEAFDVN 356 Query: 343 SQP--AVGLGATAAYG---AGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGN 397 P + G+ Y + +L+ GASKA ++ +YI AE PVI + AG Sbjct: 357 PVPVVSTNPGSNTQYQSVFSDQMLQGAAVKGASKALDRIAQFYIDMAEGIFPVIEVDAGR 416 Query: 398 EVTVVFQDGFQLKTVEEMALER 419 +V ++ G +L+ ++ Sbjct: 417 QVDIIVTKGTKLQIRSTGGTKK 438 >UniRef50_A1W656 TraB pilus assembly family protein n=6 Tax=Betaproteobacteria RepID=A1W656_ACISJ Length = 472 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 114/448 (25%), Positives = 180/448 (40%), Gaps = 26/448 (5%) Query: 6 TIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMT-GVVDTTFDD 64 +++QY L ++ G + + D +G A+ +P GV+ Sbjct: 28 LSPRQRQYALLAAILGGGIGLLWMIFSFAGSDAKPHGGRAAQTQPGDVTNIGVMPPGGQV 87 Query: 65 KVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALG 124 QYE R +NK R + + Q A L +++ + Sbjct: 88 NPVDQWVGTAGRKL----AQYETEREAQSRVNKDREAFENK---TLQRFAELEKRLTSAQ 140 Query: 125 ANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQV 184 + P P PA P P P G+ A+P + G V PP Sbjct: 141 QAAASPPPAPTPPPPAPAPAAPTTMPPAAGLPPAPSPGTGAMPSGMPTFQGMAVATPPTP 200 Query: 185 TYQSVPVPNRI------------QRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANA 232 V + R Q + + ++P SF + +L+ G DA Sbjct: 201 VISRVTLAERRRPSAEGSGDGSHQAEGANQASNAPKTVSTFLPV-SFTRGILLGGLDAPT 259 Query: 233 SVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK-D 291 + P+ +R++ +PN + CFV +GD+SSERA +RT N+SC++ D Sbjct: 260 GGQSQANPHPVLIRLSDNSVLPNQFRGEYRECFVVAAGYGDISSERAYLRTENLSCVRAD 319 Query: 292 GKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP--AVG 348 G T+++ I+G V GK G++G +V + G++L A AG V GIGQG+ A+ + Sbjct: 320 GATLEVRIQGSVYGEDGKVGMRGRLVTKQGQMLANALLAGVVSGIGQGLSTANTTYSSSP 379 Query: 349 LGATAAYGAG-DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGF 407 LG A+ + D + G+G G KA L+ YYIK AE PVI + AG ++ VV G Sbjct: 380 LGTMASTDSNADAYRAGLGHGVGKALDRLAQYYIKLAENTFPVIEVDAGRQIDVVITKGV 439 Query: 408 QLKTVEEMALERTQSRAEEDNPESPVPV 435 ++ ER Q R Sbjct: 440 RIDVPMTAVAERGQRRTASPETRYLETT 467 >UniRef50_C5ANX7 TraB pilus assembly family protein n=2 Tax=Burkholderia glumae BGR1 RepID=C5ANX7_BURGB Length = 445 Score = 270 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 102/435 (23%), Positives = 177/435 (40%), Gaps = 46/435 (10%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 M N K++Q + +VV G +A+ L G + P + Sbjct: 1 MTDPNEANKKRQ-KIISMVVFGLLAALFVVGLLFTRQGKGPQQATTSV-PFAHVG----- 53 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 D + + + Q+ E++++LD N + + +++K+ Q L +Q Sbjct: 54 --DQNDKNAWRAQ-------SEAQFAEMKKQLDAANGKADEATEKLKKVVQAQEDLKKQF 104 Query: 121 KALGANPVTATGEP--------VPQMPASPPGPEGEPQPGNTPVSFPPQGSVA------- 165 + + + + P P Q + + PP G A Sbjct: 105 DDQKKAGSGSAASAPAAASSTALDRALLNKPIPLNGQQAKSGAILNPPFGQNARGAAMDV 164 Query: 166 VPPPTAFYPGNGVTPP--------PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSG 217 V PP N +P P+ + + + Q+ N K + +IP+ Sbjct: 165 VAPPAKLDIINFDSPKKAGDDCVDPRFSSLPIDQAKQAQQDCLKANGKK---GVTFIPAT 221 Query: 218 SFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSE 277 +F + ++ G DA + + L + L +PN++ D TGC + A+GDVSSE Sbjct: 222 AFVRVFMMNGVDAPTGGEAQHDPLHVFLEVLDLANLPNARKLDITGCRILTSAYGDVSSE 281 Query: 278 RAIVRTRNISCL-KDGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGI 335 R ++ ++C+ K+G+T++M IKG V GK G++G +V ++G L + AG GI Sbjct: 282 RTMMHGETLACILKNGRTVEMTIKGTVMGEDGKEGVRGRLVSKSGSALAMSVLAGISSGI 341 Query: 336 GQGMERASQP--AVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPI 393 GQ +++ LG T+ V + IG G S+ A +L YYI+ AE+ PVI Sbjct: 342 GQAFSQSANTLNTTALGTTSIVNPSQVGRSAIGSGVSQGADSLKQYYIRAAEKLFPVIET 401 Query: 394 GAGNEVTVVFQDGFQ 408 G V G + Sbjct: 402 DGGRVVEFAVMKGAE 416 >UniRef50_Q0F360 TraB pilus assembly n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F360_9PROT Length = 445 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 100/417 (23%), Positives = 175/417 (41%), Gaps = 13/417 (3%) Query: 7 IVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKV 66 + +Q+L G +V+ ++ LS+ + ++ + Sbjct: 37 SRRGQQWLLAGGIVLVLLVLAVISVSLSERSEESADMQPVDAPGDVEVHSITAPGAGVSD 96 Query: 67 RQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGAN 126 + T+ + MQ++ E+R+E+D L ++R D +G+ + + + L N Sbjct: 97 KDIWITKSESDMRNMQQEIRELRQEIDRLRQERADA-----GVGESHFNVEDGGSLL--N 149 Query: 127 PVTATGEPVP-QMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVT 185 P + P P PAS P P T ++ + +P A G+ P + Sbjct: 150 PTLPSLPPQPMNAPASIPAIGPNTAPTGTTIAPITPQPINLPSGQA-PATTGMPPAQNPS 208 Query: 186 YQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQL 245 + K+ + SF A L+ G DA ++ P+ L Sbjct: 209 PPQSGGMLVVHMSPPVDEPAKENDDRSAWLAISFTPARLLNGLDAATGGQAQQNPQPVLL 268 Query: 246 RITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIKGHV- 303 +T + +MPN + CF+ +GD+SSERA +R ++C+ DG I+ I G+V Sbjct: 269 EVTDMTQMPNRYRENFRECFITAAGYGDISSERAYLRLEKLACIDDDGHAIEEAIDGYVT 328 Query: 304 SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMER--ASQPAVGLGATAAYGAGDVL 361 GK G++G +V + G++L A AG GIG + ++Q LG T+ G Sbjct: 329 GEDGKVGMRGRLVSKQGQVLAKALLAGIASGIGDAFTQSLSTQSVSPLGVTSTIQPGAAA 388 Query: 362 KMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 + GI G KA L+D+YI++A + +PVI + AG V V+ G +L + Sbjct: 389 RAGIYSGVGKALNKLADFYIQQANKLYPVIEVDAGRAVDVIINRGVRLPRWHKEKQP 445 >UniRef50_A5KZF6 ATPase involved in DNA repair n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZF6_9GAMM Length = 383 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 105/394 (26%), Positives = 176/394 (44%), Gaps = 31/394 (7%) Query: 71 TTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTA 130 T ++++ E + R+++ L ++ + ++ ++N L ++++ N Sbjct: 1 MTLQGQDIEDVKEKMENLNRDVERL---IISNENTLAQMKKENETLRDEIR---NNQEAH 54 Query: 131 TGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPP-PTAFYPGNGVTPPPQVTYQSV 189 +P PAS P P GS +PP P Y N + + Sbjct: 55 RTVALPSTPASASKEASHLTVMGDPA---PFGSRPLPPKPLPSYATNDLQKESFQYSNAD 111 Query: 190 PVPNRIQRKVF---------TRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNEST 240 Q + F + Q Y+PSG+F A + GADANA G T Sbjct: 112 KASFDDQGQAFDSFDFFWTASSESAYQRTVDNYVPSGTFVTAKITGGADANAGAFGQSDT 171 Query: 241 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK 300 P+ + +PN + C + +GD+SS R + RT +SC++DG+ +D+P++ Sbjct: 172 APIVFQTVHEGVLPNGEKSHLKDCTIIGSVYGDLSSSRGVARTHTLSCIRDGRILDIPVQ 231 Query: 301 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME--RASQPAVGLGATAAYGAG 358 G V G+NGI+G ++RNGKI+ A +G + G+G+ ++ LG+T++ + Sbjct: 232 GTVFNFGRNGIRGTSILRNGKIVQMAGISGILTGLGEAGAGLASTTSTSALGSTSSINSE 291 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 DV +G S+ LSDYYI AE YHP I I G V +VF GF L +E A++ Sbjct: 292 DVGLSLLGNATSEVGSKLSDYYIALAELYHPFIEINPGGIVNIVFTKGFPLD--DEEAIK 349 Query: 419 RTQSRAEEDNPE--------SPVPVPPSAESHLN 444 R +R E++ + + P+ LN Sbjct: 350 RYVARQEKEQAKPDTLLETITLNPLAAEVNQQLN 383 >UniRef50_D0SGY7 TraB pilus assembly family protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY7_ACIJO Length = 440 Score = 265 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 95/433 (21%), Positives = 170/433 (39%), Gaps = 18/433 (4%) Query: 3 SINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVD--MSGNGETVAEQEPVPDMTGVVDT 60 + N K+KQ + + + + G+L+ D + + AE + G+ D Sbjct: 8 NPNEQRKKKQLTIIVVGAILLIVVVVGSLFFLGEDPAQKQSPQAKAEDVKLTPPGGIDDN 67 Query: 61 TFDDKVRQHATTEMQVTAAQMQ-------KQYEEIRRELDVLNKQRGDDQRRIEKLGQDN 113 A ++ + ++ +LD +N++ + +R + Sbjct: 68 AAWRTGAAQDLAATNERLANLETVQSNKDSEINTLKSQLDEMNQRVQEAERIANNASRTP 127 Query: 114 AALAEQVKA-LGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAF 172 A+ +N +A G +P G P + V P G V P A Sbjct: 128 RLPAQPTNTNPPSNTSSAFGANLPPNRQGLHGDSILSDPMGSTV-NPATGQVIPLPSNAR 186 Query: 173 YPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANA 232 G + + + K+ +IP GSF + +++ G DA Sbjct: 187 GNGTAPRQAALIDLTTNDNGRGGSVASTQQAAKKE----TFIPDGSFVRVVMVTGIDAPT 242 Query: 233 SVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDG 292 +P+ G ++MPNS + GC AWG +S+ER R + SC+ +G Sbjct: 243 GGAAQNDPLPVLFETVGKLDMPNSYKMNIKGCRFLGYAWGSLSTERVNARIESGSCIVNG 302 Query: 293 KTIDMPIKG-HVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPA--VGL 349 KT+ + +KG + GK GI+G+VV + G+ L A A ++ IG + L Sbjct: 303 KTVKINVKGNLIGEDGKPGIRGKVVSKQGQALSAAALASALEAIGGLYSSTTGTTTMGAL 362 Query: 350 GATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 G DV +GG S AA+ LSD+Y++RAE+ P++ + AG V ++ G + Sbjct: 363 GVQRTVSGEDVRNSAVGGAISGAAEKLSDFYLRRAEELFPIVEVHAGRAVEILITKGAVV 422 Query: 410 KTVEEMALERTQS 422 + + ++ Sbjct: 423 EGLNIQGSSNSKR 435 >UniRef50_Q1MY41 TraB pilus assembly n=1 Tax=Bermanella marisrubri RepID=Q1MY41_9GAMM Length = 415 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 83/412 (20%), Positives = 164/412 (39%), Gaps = 24/412 (5%) Query: 3 SINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTF 62 N ++KQ +V +G + LY SD + + ++++ + Sbjct: 14 DTNEDSRKKQIRNFSLVGIGLFLMVLLGLYYSDNQIKKDRQSLSAEIEEQRKK------- 66 Query: 63 DDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKA 122 D+++ + +K + E VL ++ + R+++L + + Sbjct: 67 DNEILKRYKFNPSEVVKPEEKWMAKSETEFKVLKEENDSLKERLQRLEEMMEKGPDTSNN 126 Query: 123 LGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPP 182 + + T + P P P + + G P Sbjct: 127 TDESVIANTQQSTPVENDQPKVKLSSPLSVESVKASVADG--------VAEPSIKNKKST 178 Query: 183 QVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVP 242 ++ Y + +K + Y+P+G+FAK +++ G DA + +P Sbjct: 179 EIGYVDLSPMGSSNQKD-----KVKKNIETYMPAGAFAKVLVLSGVDAPTGGMAESNPLP 233 Query: 243 MQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIKG 301 + L++ +PN D C V A GD+++ER ++RT +SC+ +G I++PIKG Sbjct: 234 VILKVLDSAILPNFFDSDIRNCHVVGAATGDLAAERVMIRTEVLSCVLANGDIIEVPIKG 293 Query: 302 HV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGM--ERASQPAVGLGATAAYGAG 358 ++ GKNG +G VV + G +L + AG G+ + + LG + Sbjct: 294 YIAGEDGKNGFRGRVVSKQGAVLAKSLFAGVASGLSNSINSQYQQIQTSALGTVTSIDPD 353 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 V + G GA+ + ++D+Y KRA + +P+I + +V G +L+ Sbjct: 354 KVAESGAAQGATTTLEKIADFYFKRANEIYPIIEMAPNRIGELVIIKGAKLE 405 >UniRef50_B7XGQ7 Putative pilus assembly protein n=2 Tax=Pseudomonas RepID=B7XGQ7_PSEPU Length = 438 Score = 262 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 88/433 (20%), Positives = 156/433 (36%), Gaps = 31/433 (7%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 M +I +++ ++ +G I G + ++ + + ++ Sbjct: 1 MKAIQQFLEKLTPRGKLMLAIGGTVLIVGTVVGVAMNAATPERKSRAAAKPQ-VEAILTD 59 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNK--QRGDDQRRIEKLGQDNAALAE 118 + + Q+Q Q + R + K Q + Q ++ L Q+ + + Sbjct: 60 EDPRALGMDSIASQ---LRQLQAQQNRLERTMGQKEKDVQLKNTQEKVSGLEQELQLVQK 116 Query: 119 QVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGV 178 ++ +G +S P P V + A P Sbjct: 117 ELAKVGREKKGTGESEDNSSDSSASNQARSPIPPRESV----FVNKATSSPAELTDVYSN 172 Query: 179 TPPPQVT--------YQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADA 230 PP Q P I+ K K +P+GS ++L+ G DA Sbjct: 173 LPPEQPEDPKSRSSEKTEAPKIRVIKAKEDEGKSDKPEELSVTLPAGSILSSVLVTGMDA 232 Query: 231 NASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL- 289 P +RI +PN D CF+ WGD+SSERA +R +SC+ Sbjct: 233 PTGKQAQRDPFPSLVRIKNEAILPNRFRADFRECFMIASGWGDLSSERAYMRAERLSCVR 292 Query: 290 KDGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVG 348 DG ++ I+ + GK G++G +V + G+I+ + GAGF+ GI P + Sbjct: 293 NDGSVLEASIEAYATGEDGKAGLRGRLVSKQGQIIARSLGAGFLQGIAGAFNVQKVPTIN 352 Query: 349 LGATA-----------AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGN 397 + + + L+ GA A + ++D+Y++ AE PVI I A Sbjct: 353 VTRASDDGKTVAPVYEQAFDSNALQSAGFSGAGSALERIADFYLEMAESIFPVIEIDAMR 412 Query: 398 EVTVVFQDGFQLK 410 EV + G +K Sbjct: 413 EVDFIVNKGMTVK 425 >UniRef50_C3NU45 IncF plasmid conjugative transfer pilus assembly protein TraB n=16 Tax=Gammaproteobacteria RepID=C3NU45_VIBCJ Length = 430 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 83/424 (19%), Positives = 150/424 (35%), Gaps = 13/424 (3%) Query: 6 TIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDK 65 + +Q + A GG + + V + + + + ++ T Sbjct: 2 MKAQWEQMSPNMKRGLSVAGIAGGLILMVMVFSPNPDDGASSRNRQETIRHILTDTNTRD 61 Query: 66 VRQHATTEMQVTAAQMQKQYEEIRRELDV---LNKQRGDDQRRIEKLGQDNAALAEQVKA 122 V + ++ +Q L + ++ + A L ++ Sbjct: 62 VGVDSLAANVKLLSERNEQLRREVERLRRDVDSGRLSPGSPSIPSEVNAELARLRAELDD 121 Query: 123 LGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPP-QGSVAVPPPTAFYPGNGVTPP 181 + A +A + E + P + + +P P NG Sbjct: 122 VRAGGDSAVEGTNSRFEVPLSAMELPKEEKPLPSNPDDYFANAPLPDPLYQQTANGQGAR 181 Query: 182 PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLP-YIPSGSFAKAMLIEGADANASVTGNEST 240 + I+ +V E + P Y+P+GS LI G DA + Sbjct: 182 ARDVPLPPITIRMIEPEVVAEPEVVVQEAPPLYLPAGSIISGTLITGLDAPTHESARREP 241 Query: 241 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK-DGKTIDMPI 299 P LRI +PN D CF+ +GD+SSERA +R ISC++ DG I+ + Sbjct: 242 FPALLRIQKEAILPNRFRADIKECFLIAAGYGDLSSERAYLRGETISCVREDGGVIETRL 301 Query: 300 KGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGAT------ 352 + V GK GI+G +V + G+++ + AGF+ G+ + P + G Sbjct: 302 DSYAVGEDGKAGIRGRLVSKQGQLVAKSMMAGFLQGLAGAFDVNPVPTIQTGNAGDTQLY 361 Query: 353 AAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTV 412 + + L+ G KA ++ +Y+ AE PVI + A ++ V+ G L Sbjct: 362 QQVMSQEALQGAAIKGTGKALDRVAKFYLDMAENMFPVIEVDAARKIEVIVTRGASLSLA 421 Query: 413 EEMA 416 Sbjct: 422 TSQG 425 >UniRef50_A4JTP2 TraB pilus assembly family protein n=2 Tax=Burkholderiales RepID=A4JTP2_BURVG Length = 405 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 94/421 (22%), Positives = 180/421 (42%), Gaps = 30/421 (7%) Query: 2 ASINTIVKRK--QYLWLGIVVVGTASAIGGALYL-SDVDMSGNGETVAEQEPVPDMTGVV 58 ++ I+K+K + + + G + + S GN + P V Sbjct: 3 GNVKDILKKKWLELPPKTRTAIAIGALFAGLVAVGSIFVHPGNAPRKQKIAP------TV 56 Query: 59 DTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAE 118 K + + ++ + +I+ ELD N ++ ++I+++ ++A Sbjct: 57 SNLLLPKPKDQTSEQLAAANKATNDEVAKIKTELDKSNDEKAALLKKIDEMQSNSAHPDV 116 Query: 119 QVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGV 178 V A + A + + S P + +P P+A + Sbjct: 117 GVNADMMKELMAMKSRLDDLEKSK------------ANGKTPGLTDPLPLPSAGGKSDDD 164 Query: 179 TPPPQVTYQSVPVPNRIQRKVFTRNEGKQGP-SLPYIPSGSFAKAMLIEGADANASVTGN 237 P + + K T+ KQ Y+ +GS + +L+ G DA S Sbjct: 165 APVAAAQPEKPHLRVTTNTKAITKVAAKQDTTPAAYLTAGSMFEGILLNGMDAPTSSVAQ 224 Query: 238 ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD-GKTID 296 ++ VP +RI +PN+ +D CFV + +G +SSERA +RT +SC+ D GK ++ Sbjct: 225 KNPVPAVMRIKTDAILPNNYNHDVKECFVLVSGYGSLSSERAQLRTETLSCVGDGGKVLE 284 Query: 297 MPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAY 355 + G+ V G+ G +G +V + G+++ + AG + G + P + LG+ + Y Sbjct: 285 TKLDGYVVGEDGRVGARGRLVSKQGQLIAKSLAAGVLSGFSDALTPQQIPRLDLGSGSGY 344 Query: 356 ------GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 AG + + G+ G S AA++++ +Y+ A++ PV+ I AG ++T+V G +L Sbjct: 345 ISTERATAGTIAETGVAKGFSTAAKSVAAFYLDMAKEMTPVVEIDAGRKLTIVLIKGVEL 404 Query: 410 K 410 K Sbjct: 405 K 405 >UniRef50_Q5ZTS2 Putative conjugative transfer protein TraB n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS2_LEGPH Length = 439 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 101/446 (22%), Positives = 175/446 (39%), Gaps = 38/446 (8%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSG----NGETVAEQEPVPDMTG 56 +A+++ +K++Q ++LGIV+ I L + + P T Sbjct: 9 LANMSIQLKKQQQIFLGIVIGVIVLVIACFALLGNKTVKSREVDKPAYKKHSLASPISTA 68 Query: 57 VVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAAL 116 ++ + +K + E+ + K + + E D +K + + ++ + L Sbjct: 69 TNESHWIEKTQNAWRAEL-AKSELFDKNLKALGDEKDKQSKLITSQKDELSEMKSTLSEL 127 Query: 117 AEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGN 176 Q+ L T P EPQ G P + S ++ Sbjct: 128 KHQIVKLQMERTT---------PIDGTLKNNEPQNGLLPRADEAAASNSM---------- 168 Query: 177 GVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTG 236 + Y + K+ +++ + Y+ S +FAKA++++GADA+A V Sbjct: 169 -EMDSGFIQYTA---------KLNKKSKPRIKTPNNYVFSNTFAKAVVLQGADASAGVLS 218 Query: 237 NESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK-DGKTI 295 + M +I MPN GC V GD+SSER RT +SC+ +G I Sbjct: 219 QANPDIMIFQIVDDGVMPNKYRAPLKGCMVSASVIGDISSERGKFRTERLSCIHSNGTNI 278 Query: 296 DMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQ--PAVGLGATA 353 D+ + G +S KNGI+G V R+ ++ A+ F + +G ++ S LG+ + Sbjct: 279 DIQVTGIIS-DSKNGIRGRAVWRDEPMVKKAFWGNFWESMGNIGQQYSTDYSTSPLGSVS 337 Query: 354 AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 AG + + G S AA+ + Y IKRAE YHP+I + V V F GF L Sbjct: 338 TIQAGKIPLAAVSSGGSGAAKMYAQYNIKRAEMYHPIIQLPPIVTVDVTFLKGFWLDGGT 397 Query: 414 EMALERTQSRAEEDNPESPVPVPPSA 439 + ++ P Sbjct: 398 DTNAPEQPEESQNSKVAFEAPAESET 423 >UniRef50_C1MEJ9 Pilus biogenesis protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MEJ9_9ENTR Length = 465 Score = 257 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 104/464 (22%), Positives = 172/464 (37%), Gaps = 52/464 (11%) Query: 5 NTIVKRKQYL-WLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFD 63 + K K+++ W G+ L + S + A QE V + V+ Sbjct: 11 SISAKHKKWVIWAGVTTFAI------LFLLLVIPDSAGPRSRAPQEKV--IASVLTDGDT 62 Query: 64 DKVRQHATTEMQVTAAQMQKQYEEIRREL------DVLNKQRGDDQRRIEKLGQDNAALA 117 + V Q+A + K ++ + L D ++ + + +K G + AA+ Sbjct: 63 NGVSQNAIAARIRALDKTIKDQGQLIKALTEKYGADQTAQRLSNLENGQKKSGAEVAAIK 122 Query: 118 EQVKALGANPVTATGEPVPQMPASPPG---------PEGEPQPGNTPVSFPPQGSVA--- 165 ++V +NPV + +P P + G PE P TP + + Sbjct: 123 KRVDT-VSNPVPYSQQPRGATPLAGNGQRNVPTLYKPEEISAPSVTPRNSGSFNNGKTLQ 181 Query: 166 ----------VPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRN---EGKQGPSLP 212 VP P A V Q P +Q + E + Sbjct: 182 RVYEDAAPPVVPEPAANQRQQKGKDGKAVPSQITPEIITVQEDIEAAPVADEDDNPENQT 241 Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 Y+P+ S +LI G DA S + P R+ +PN D C + +G Sbjct: 242 YLPATSIISTVLIAGMDAPTSRDARKDPYPALARVKKDAILPNRFRADIRECGMLAAGFG 301 Query: 273 DVSSERAIVRTRNISCLK-DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAG 330 D+SSERA R+ I+C++ DG + P+ + V GK+G++G +V + G+ L A AG Sbjct: 302 DLSSERAYFRSEVITCIRDDGAVFEAPLVAYAVGEDGKSGVRGRLVTKQGQYLARALTAG 361 Query: 331 FVDGIGQGMERASQPAVGLGAT---------AAYGAGDVLKMGIGGGASKAAQTLSDYYI 381 F+ Q S P + + + D L+ G A L+D+Y+ Sbjct: 362 FLQAASQLFNVQSIPTISIKRDGDSSDSTPYQQVMSSDALQGAAVSGVGGALNRLADFYM 421 Query: 382 KRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAE 425 + A PVI I G V + Q G LK + +T + Sbjct: 422 QMAGDLFPVIEIDPGRSVDFIVQKGVMLKFTRVTSKTQTVGGKK 465 >UniRef50_Q5NX52 Sex pilus assembly protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX52_AZOSE Length = 420 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 105/428 (24%), Positives = 187/428 (43%), Gaps = 29/428 (6%) Query: 4 INTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAE-------------QEP 50 ++ K ++ + + + L+ V S G T + P Sbjct: 1 MSLKEKWQELPSNARLGIMVGGIFVSVIALAAVVQSTRGPTREIAGQPIGANRPANFRVP 60 Query: 51 VPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLG 110 TGV D + + +T M +M+ + + R+L + +G + ++ L Sbjct: 61 TARETGVDDLAAKLESIEKSTVGMDNRVKKMEADRQLLFRQLQEMRGTQGSNGVTVD-LV 119 Query: 111 QDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPT 170 + L+ +++ L + A + + P P + +P + S A+P P+ Sbjct: 120 DEVQRLSRELERLKFSGGGAVAQGL-VGPDGLPVVGEDGKPLSADNPADAFSSGALPQPS 178 Query: 171 AFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADA 230 PPP + P ++ + + Y+P GS + L+ G D Sbjct: 179 VSAAPVFAPPPPTLRVVGAATPKEEKKTKDDK------ERIAYLPMGSQFEGFLLNGMDV 232 Query: 231 NASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK 290 S ++ VP LR+ +PN T+D CFV + +GD+SSERA++RT SC+K Sbjct: 233 PTSNAKSKDPVPAVLRVKTDAILPNHFTHDVRECFVIISGFGDLSSERAVMRTEGFSCIK 292 Query: 291 -DGKTIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP--- 345 DG I+ P++G+ V G+ GIKGE+V + G+++ + AGF+ GI +G++ P Sbjct: 293 DDGAVIEGPMEGYVVGDDGRVGIKGELVSKQGQMIARSLTAGFLGGIAKGLQPWGTPDQW 352 Query: 346 ---AVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVV 402 +G + GDVL G GAS AA ++++Y++ A + PV+ I A T+V Sbjct: 353 ANTQTSVGQAERFEMGDVLTAGAMSGASSAANQVANFYLEMAREMFPVVEIDAARRATIV 412 Query: 403 FQDGFQLK 410 G ++K Sbjct: 413 LTKGLEVK 420 >UniRef50_D2U0R2 Conjugative transfer pilus assembly protein TraB n=1 Tax=Arsenophonus nasoniae RepID=D2U0R2_9ENTR Length = 434 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 75/405 (18%), Positives = 145/405 (35%), Gaps = 31/405 (7%) Query: 30 ALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIR 89 ALY + E E T ++ + V Q + +++++ ++ Sbjct: 30 ALYFFTSVPDQSYEVKKENSKP--TTNLITSGDTQGVSQESIAA---DLRRIEEELIAVK 84 Query: 90 RELDVLNKQRGDDQRRIEKLGQDNAALAEQV--KALGANPVTATGEPVPQMPASPPGPEG 147 ++ + K+ + ++ +L QDN L Q+ + + P + Sbjct: 85 QQRETDQKEISELNKKQTQLSQDNNDLRFQIKNQQPTYQITPKVTKNTPNAYENELQKIY 144 Query: 148 EP-------------QPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNR 194 + G + P + G + + ++ Sbjct: 145 QNNDLPYSNNHVQNGDRGKDETKSDTFANEESYPEIMRFDGVASDGAEKGGALGESLNSK 204 Query: 195 IQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMP 254 + N + Y+P+ S + + G DA + E+ PM LR+ +P Sbjct: 205 KESDKPKIN-NDEAIEGTYLPASSIIPTVALSGMDAPTAKQARENPYPMLLRVKKDAILP 263 Query: 255 NSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK-DGKTIDMPIKGH-VSFRGKNGIK 312 N+ + D C + +G++SSERA +R+ I+C++ DG + V GK GI+ Sbjct: 264 NNFSADIKECGILAVGYGELSSERAYLRSNTITCIRDDGAVFEAAFDSFAVGEDGKAGIR 323 Query: 313 GEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATA--------AYGAGDVLKMG 364 G +V + G+ L A AGF+ + P + LG + L+ Sbjct: 324 GRLVTKQGQYLAKALIAGFLQAGAEMFSVQQLPTITLGRVGDDKVNSPYQQINSNKLQGA 383 Query: 365 IGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 G A L+D+Y+ A+ PVI I + ++ G +L Sbjct: 384 AMKGVGGALNRLADFYMDMAQDLFPVIEIDPARSIDLIVTKGVKL 428 >UniRef50_B4EQI2 Putative TraB conjugative transfer protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4EQI2_BURCJ Length = 477 Score = 253 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 100/447 (22%), Positives = 166/447 (37%), Gaps = 34/447 (7%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTT 61 A N +K +Q + + + +V +A G L+LS D + + E + + D Sbjct: 11 AGTNDRIKSRQRVIMIVAMVLILAATGVGLFLSG-DATPTAKPKPVVETIQPPGSISDRD 69 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVK 121 +++ ++ + + +D + + AA A Sbjct: 70 AWRGQSDAKLLDLEQRVQRVAAEQATAKAAIDKVASDVAGQKAAEASAAASAAAAASAAA 129 Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNT--PVSFPPQGSVAVPPPTAFY------ 173 A A T + + P P G G V PP + A+ P Sbjct: 130 AASAPSGTTSATTASPATLNKPLPVGTTGRGLGGKRVLTPPGDNTALNTPIGEGMPVSNE 189 Query: 174 ---------------PGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSL------- 211 ++ Q PV R +R T + Sbjct: 190 LEIIDFDDSTDAGGVGAGPGGTGGKLEVQGFPVDARARRYKMTTSTNGGAAGGAGGKGDV 249 Query: 212 PYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAW 271 +P+GSF ++ G DA + + L +PN K+ D GC + AW Sbjct: 250 NLLPAGSFIPVAMLNGVDAPTGGQAQSDPLSVDLEAIKPANLPNGKSLDVRGCRIVSSAW 309 Query: 272 GDVSSERAIVRTRNISCLKDGKTIDMPIKG-HVSFRGKNGIKGEVVMRNGKILGWAWGAG 330 GD+S+ER + RT+ +SC+ G I++ IKG + GK G++G +V + G++L A AG Sbjct: 310 GDLSAERMMGRTQILSCIIAGHPIELEIKGKLIGEDGKEGVRGRLVTKQGQVLANAILAG 369 Query: 331 FVDGIGQGMERASQPAV--GLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYH 388 + GIGQ ++++ G G G V + IGGG A Q L+ YY+K A++ Sbjct: 370 SLGGIGQAFQQSATVTSFGGGGVAQTIDGGQVGRAAIGGGVGTAGQMLAQYYLKAADKLF 429 Query: 389 PVIPIGAGNEVTVVFQDGFQLKTVEEM 415 PVI A + V G + Sbjct: 430 PVIETDATRTIEVSITKGVYVDAATAA 456 >UniRef50_C5SIK4 TraB pilus assembly family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIK4_9CAUL Length = 442 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 112/434 (25%), Positives = 186/434 (42%), Gaps = 41/434 (9%) Query: 3 SINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGV----- 57 S N K+ L ++ A G A+Y + + +E + G Sbjct: 19 SPNAEAKKNSTLLWASIIGVAAVLGGFAVYSAVFPPDPKPKQKLTKEEAVRIKGTASVAS 78 Query: 58 ---VDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNA 114 + T ++ + ++M Q++ + + E D LN + D+ ++ Q Sbjct: 79 GVPISPTAENAQLKSERSDMDARLRQLEAENAALSAERDTLNSRNLQDREEAYQMLQ--- 135 Query: 115 ALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFP---PQGSVAVPPPTA 171 AE+ + G++P G P + P P P P + P+ S A Sbjct: 136 --AERDRRGGSDPHPTRGYPTEAADGAGFSPTPNPAPSLQPDANGKERPRRSFRTVSMNA 193 Query: 172 FYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADAN 231 GNG V ++ V +RI+ Y+P S+A A ++ G D Sbjct: 194 SSAGNGELAAQPVAQKASAVTDRIETF----------DPSEYVPPNSYATARVLVGVDMQ 243 Query: 232 ASVTGNESTVPMQLRITGLVE----MPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNIS 287 V+GN P+ LRI ++ D GC + A+ ++SSE+ V+ + I+ Sbjct: 244 TGVSGNSDPKPVLLRIRTPAFGVGMDGKFQSSDLRGCTINGAAYAELSSEKVYVKLQRIT 303 Query: 288 CL-KDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPA 346 C K+GK + P++G+V+++GK G++G+VV R G A+ AG G+GQ ME+ Q Sbjct: 304 CEGKNGKFLTSPVEGYVTYKGKTGVRGKVVRREGDYASKAFIAGTFQGLGQAMEKNVQGT 363 Query: 347 VGL----------GATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAG 396 + +G++ + +G G S A L+DYYIKRAEQY PVI + G Sbjct: 364 ISGKFGESDAGSIINARPLSSGEIGQASVGSGVSNAGGMLADYYIKRAEQYQPVIEMPTG 423 Query: 397 NEVTVVFQDGFQLK 410 +V +VF GF+ K Sbjct: 424 IDVEIVFLAGFRFK 437 >UniRef50_Q2LTZ2 Pilus assembly protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ2_SYNAS Length = 397 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 110/420 (26%), Positives = 185/420 (44%), Gaps = 43/420 (10%) Query: 8 VKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVR 67 +++ + L + V A ++ G L+ D V+ + K Sbjct: 15 RQKRNLVLLAMATVVLAFSLAGYLF-----------------KTRDGGTVLGKSAQKKK- 56 Query: 68 QHATTEMQVTAAQMQK-QYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGAN 126 E+ + A ++K Y E R+E+ ++ Q+ ++++ ++ A + V A Sbjct: 57 -----EITLDAGLLEKSAYLEGRKEIARTEEKLSLLQKELDEIKEEKA---KAVHAGSKQ 108 Query: 127 PVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTY 186 P+ A P P P+ P P S P P A G+ + Sbjct: 109 PLPAV--PKPPDPSKAISYPVPPLPPPPVSSADPSKVGQASKPAAETTGD-------IEL 159 Query: 187 QSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLR 246 S P + +K + ++G S+ Y+P SF +A L+ G DA + + VP+ LR Sbjct: 160 VSNPQAQKQDQKAAEVKKNEKGDSV-YLPP-SFMEATLLSGLDAPTVESAKGNPVPVLLR 217 Query: 247 ITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL--KDGKTIDMPIKGH-V 303 I L +PN D GCFV E G+++ ERA +R N+SCL K ID IKG V Sbjct: 218 IKDLAILPNKVKADLKGCFVIAEGQGNLADERAHLRLVNLSCLSRKGQAVIDQKIKGFVV 277 Query: 304 SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPA--VGLGATAAYGAGDVL 361 GK G++G VV + G + + AGF G+G + A+ + LG T G + Sbjct: 278 DSDGKIGLRGTVVSKMGSAIARSVLAGFFGGVGDALRSATMTSSISALGTTQTVDPGQIA 337 Query: 362 KMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQ 421 + G+G G ++ A L +Y++ A+Q PVI +GA +T+V +G L+ E+ ++ + Sbjct: 338 QAGLGSGLAQGAHELQKFYLELAKQSMPVIEVGATRNITLVVSEGVDLEIKEKPGGKKQK 397 >UniRef50_A3VN24 Putative conjugative transfer factor, TraB n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN24_9PROT Length = 418 Score = 243 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 110/424 (25%), Positives = 181/424 (42%), Gaps = 29/424 (6%) Query: 1 MASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDT 60 M+ N +Q L + +A ++ D + + MT V++ Sbjct: 1 MSEENKKRLTRQRLLMYGAGAAAVAAASVWIFSGDGADNQTRAEDLRRRKA--MTDVINP 58 Query: 61 T--FDDKVRQH--ATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAAL 116 DD + + ++ ++++ ++ L + + + ++K D AA+ Sbjct: 59 PGMADDFLSETGTRLAAVEGAISRLEADNTSLKEALRSRDLELAATRADLQKTRDDAAAM 118 Query: 117 AEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGN 176 E + A+ V+ EP +P S P G+P S A P P + P Sbjct: 119 VEDMAGRVAS-VSTRTEPALGLPTSEPSAIGDPFGRRG-----VLPSGAAPQPLSVEP-- 170 Query: 177 GVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTG 236 V P Q + +V + Y+P ++A A ++ G D + V Sbjct: 171 -VIPRTVQVLQFAAATEALDTRVLEPAVFRLDE-GDYVPPNAYAPAHVLVGVDMSTGVRL 228 Query: 237 NESTVPMQLRITGLV--EMPNSKTYD--ATGCFVGLEAWGDVSSERAIVRTRNISCLK-D 291 + P+ LRITG + N + D TGC V A ++SSER V+ + I+C + D Sbjct: 229 SADPKPVLLRITGPARSVLQNGRQLDVDLTGCLVNGAAHAELSSERVYVKLQKITCDRGD 288 Query: 292 GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGA 351 G+ + P++G+++ GK G++G VV R G I+ A AG V G G+G+ R + G Sbjct: 289 GEVAESPVEGYIAQLGKVGVRGRVVSREGDIVSKALVAGVVGGFGRGIARNTDQIFAAGT 348 Query: 352 TAA--------YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVF 403 AG++ G G G + AA T+SDY I RAEQY PVI + G +V +VF Sbjct: 349 AGGSTIIGQDNLSAGEIAAGGFGEGLATAADTVSDYLIDRAEQYQPVIEMPTGIDVEIVF 408 Query: 404 QDGF 407 GF Sbjct: 409 LSGF 412 >UniRef50_Q6MBA0 Putative F pilus assembly protein traB n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBA0_PARUW Length = 408 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 85/368 (23%), Positives = 147/368 (39%), Gaps = 13/368 (3%) Query: 64 DKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKAL 123 K + E + +K+ E+++ L +L K+ Q R E+L A ++ + Sbjct: 52 QKYYEETLLEYKERERANEKEKIELKQYLTLLKKKMEASQVREEELKNKKDTSALEIASS 111 Query: 124 GANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQ 183 N + PP P + F QG++A A P Sbjct: 112 SKNTFDRPVFEQAEESLLPPSSYRFPSSSFSSDPFVSQGTIASFGQEAVKATETAALRPP 171 Query: 184 VTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPM 243 + ++P + + + P+ +A+L+ DA + +P+ Sbjct: 172 LCEYTLPQEAKNELFSLEKRT----------PANVSVRAILLSSVDAVCRLDAQSDPIPV 221 Query: 244 QLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK-DGKTIDMPIKGH 302 +LR+ +P GC +G A+GD+SSER +R N++ + G+ I+ + G+ Sbjct: 222 KLRLLDDAHLPGGMKVKLKGCLIGASAYGDISSERVYMRLENLTQVNLSGQAIETEVTGY 281 Query: 303 V-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVL 361 V G+ G++G +V R+ KIL A G+G + GI Q ++ A + D Sbjct: 282 VSGEDGRFGMRGILVDRSAKILKPALGSGILSGIAQTLQSACARPSKETINTYSLSSDFA 341 Query: 362 KMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQ 421 + + S A L+ YYIKRAEQ PV+ I AG V V F GF + + + Sbjct: 342 QNTVAK-TSDAFSLLASYYIKRAEQVQPVLQIDAGRLVDVTFTQGFSMGDLHAKENLKQI 400 Query: 422 SRAEEDNP 429 + Sbjct: 401 RNKHRPSS 408 >UniRef50_Q5WSC0 Putative uncharacterized protein n=2 Tax=Legionella RepID=Q5WSC0_LEGPA Length = 484 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 91/474 (19%), Positives = 178/474 (37%), Gaps = 39/474 (8%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTT 61 A++N K +Q ++ G LY S ++ P GV+D+ Sbjct: 15 ANLNQSAKMEQLRNGLAFLLLGGLCYGFYLY------SSKPQSTLPTNKKPVFDGVLDSA 68 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVK 121 F + + Q ++ E+ ++ + + + L +N AL Sbjct: 69 FSKLSDEAVLEKQQRQIDALKALVEKNKK----------NTPNKSDDLVSENQAL----- 113 Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPT--AFYPGNGVT 179 ++A + + Q+ G+ Q S +VA PPT + Sbjct: 114 ------LSAMQKQLEQLALENKEINGKLQVALLKNSQTSLAAVAPRPPTREEIEARHKQR 167 Query: 180 PPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNES 239 + Y + + R + ++ Y+ +G+ A+ +L+ GA +A + G ++ Sbjct: 168 ILDEKAYYGKAGLETVHFN-YRRQQKEERTPDNYVWAGTHAEGILLSGAKGDAGINGAKN 226 Query: 240 TVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPI 299 +R+ MPN++ GC + +GD+S + ++ +SC K + + + Sbjct: 227 MGTALIRLDSNGIMPNNRHSRLNGCLAIVSTYGDLSDDAVVMHLETLSCAKPNLSFEQKV 286 Query: 300 KGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMER---ASQPAVGLGATAAY 355 G V ++G +++ +L ++ AG + G G G++ A G G Y Sbjct: 287 YGAVYDLDAMQDLRGTSILKTKPLLEYSAAAGILAGFGDGLKNLNTAQTINPGAGTITTY 346 Query: 356 -GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 A +++ GG S A +SDY +K A+ YHP++ AG V+++F GF + Sbjct: 347 GQASTLMQSAAGGAVSNPANKISDYIMKIADIYHPLVVARAGRRVSIMFTKGFWID---- 402 Query: 415 MALERTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGNLNPQQFMSGSQ 468 A + +S DN + + G + F S +Q Sbjct: 403 RAHQSFESGKSIDNQSAQNEAAITTTISRAGGEGGESSSGESTAPQSTFQSDTQ 456 >UniRef50_C0QUX1 TraB pilus assembly family protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QUX1_PERMH Length = 416 Score = 237 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 79/428 (18%), Positives = 165/428 (38%), Gaps = 42/428 (9%) Query: 6 TIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDK 65 + +K+ + LG + G + + + + + + + +V + +P + + ++ Sbjct: 25 DRLNKKRMVILGAITAGISLFVIFSFFSNVIFGLADNTSVPQYQPKKEGEKTIAPKV-EE 83 Query: 66 VRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGA 125 + + + +++ L + + +++ Q+ L E+++ Sbjct: 84 DWKAI----------TEMKINQLQERLQRMEDTNKQILQLLQEQKQEREMLREEIEREIE 133 Query: 126 NPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVT 185 V T P P P G P Sbjct: 134 ERVKTT-----------------PSASVPPPPPQTPVQYGQPQGQQGQQGQQQKAPALKE 176 Query: 186 YQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQL 245 ++ +++V + ++ +P G F K + + G DA G + P+ + Sbjct: 177 FKPDKEEETDKKEVSKTEKKEKKAVKIKLPLG-FLKGLTLTGLDAPTFQYGQNNPHPVLI 235 Query: 246 RITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPIKGHV- 303 + N+K + CF +G++SSERA +R +SC+ K G ++ + G V Sbjct: 236 VSLSKQIIANNKKLNLKECFFLGSGFGEISSERAYIRLVKLSCIDKKGNVLEQKVAGWVL 295 Query: 304 SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP--AVGLGATAAYGAGDVL 361 GK G++G VV + G +L + AG ++G+ + + S +G T D Sbjct: 296 DDDGKVGLRGRVVSKQGAVLAKTFMAGLLEGLSRTIAATSTTIQISPVGTTQTLNPQDAT 355 Query: 362 KMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQ 421 K+ + G AA L+ +Y+K AEQ +PV+ + G ++T++ G +LE+T+ Sbjct: 356 KVALASGFQSAASRLAQFYMKIAEQMYPVVEVSPGRKITILISGG---------SLEKTK 406 Query: 422 SRAEEDNP 429 NP Sbjct: 407 DNKLISNP 414 >UniRef50_B3EB62 TraB pilus assembly family protein n=3 Tax=Proteobacteria RepID=B3EB62_GEOLS Length = 422 Score = 230 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 99/423 (23%), Positives = 170/423 (40%), Gaps = 33/423 (7%) Query: 8 VKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVR 67 +R+ +W I+ A+ Y + ++ + + Sbjct: 15 SQRRNLVW--IMTGCILVAVFTIGYYVMNKGKDPALNKSVKQTPLSIEP-------KLLE 65 Query: 68 QHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANP 127 + E Q A+ + E+ ++LD + +++ G A Q+ A P Sbjct: 66 KSQFLESQKEIAKRDDKVAELTKKLDEITREKK---------GDPTTAPVAQIGTAPAVP 116 Query: 128 VTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGS-VAVPPPTAFYPG--------NGV 178 + Q+ + G + P+ PQGS +++PPP A G Sbjct: 117 GDNHAQQQGQLQKTGSGRTAISKQPLPPIPPMPQGSSISLPPPPATAQGIAAGQLQSPTE 176 Query: 179 TPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNE 238 T + S P + + + G Y+P SF +A L+ G DA + Sbjct: 177 TEIGDIAIVSSPGSGKSAKADVDDKKKDVGTVQVYLPP-SFMEATLLSGLDAPTTSEAKG 235 Query: 239 STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL--KDGKTID 296 + VP+ LR+ +PNS + GCFV + G++++ERA + ++SCL K +D Sbjct: 236 NPVPVLLRVKTPAVLPNSVKANLKGCFVIADGKGNLATERAELLLVSLSCLDRKGQAVVD 295 Query: 297 MPIKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP--AVGLGATA 353 IKG V GK G++G VV + G ++ + AGF G G ++ A+ LG T Sbjct: 296 QKIKGFVVDEDGKIGLRGRVVAKMGSMIARSMLAGFFGGAGDAIKSAATTMSVSPLGTTQ 355 Query: 354 AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 D+ G+G G S + + +Y++ A Q PVI +GA VT+V +G L + Sbjct: 356 TVDPKDIAMSGLGSGLSSGFKEIQKFYMELARQTMPVIEVGATKPVTLVISEGINLDIKK 415 Query: 414 EMA 416 Sbjct: 416 IAK 418 >UniRef50_C4Z000 Putative TraB pilus assembly n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4Z000_9RICK Length = 428 Score = 230 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 90/448 (20%), Positives = 187/448 (41%), Gaps = 62/448 (13%) Query: 3 SINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTF 62 S++T + ++ WL I + I G L ++ SG+ + +E + D+ + T++ Sbjct: 30 SVSTYRRAQERRWLYICL-----IIFGVLGVAMKLQSGSSSKIKHEEKIKDVGRNIGTSY 84 Query: 63 D----DKVRQH-ATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALA 117 D +K+ Q+ +++ + ++Q++ E++ ++ R ++ + + Q+ +A Sbjct: 85 DAMDGNKIWQNHFEDKLRNSQHELQEKVEKV------IHDMRAKEEEQRKHRDQEMQKMA 138 Query: 118 EQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNG 177 EQ+ + + + + ++ + E + Sbjct: 139 EQL-KFAQDELRSAALELKRVSDIAESNKYEQEA-------------------------- 171 Query: 178 VTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVT-G 236 + +I V K YIP SF + G + + Sbjct: 172 ------IIRGGEVSSIKIGSNV---QWDKPKDIRDYIPETSFVSGYTLGGIVTSTGINTA 222 Query: 237 NESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGK--T 294 +E+ P+ +R++ +P + D + C V ++GD+SSER I+R + C+ Sbjct: 223 SENATPVVIRLSNRGNLPKNINVDISKCRVQGSSYGDLSSERVIIRAEKLICIDPKTELV 282 Query: 295 IDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIG---QGMERASQPAVGLG 350 + G V G NGIKG+V+ + K + A+ + G+ +G+E + ++G Sbjct: 283 TTSDVIGVVHGDDGMNGIKGKVIATSSKHIKNAFIGSMLSGLASSSKGIEGLTLTSLGAV 342 Query: 351 ATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 T G DV G+ G S A + ++DYY++ AEQ PV+ + G +V V+F GF L Sbjct: 343 NTKRQGFKDVAGQGLLNGGSNAGEKIADYYLRLAEQMSPVLTVPGGVKVDVIFTKGFFL- 401 Query: 411 TVEEMALERTQSRAEEDNPESPVPVPPS 438 E+ +++ ++A + N + Sbjct: 402 --GEVGMQQKIAKARKINKQVQAEDYEE 427 >UniRef50_A4XE89 TraB pilus assembly family protein n=6 Tax=Sphingomonadaceae RepID=A4XE89_NOVAD Length = 458 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 106/433 (24%), Positives = 168/433 (38%), Gaps = 40/433 (9%) Query: 5 NTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDD 64 N V++KQ L LG + ++ D + +V Q + +V+ + Sbjct: 36 NEAVRKKQMLLLGAGGLAALVIGSSWIF--AGDHKSSDASVKRQVADVSVDEMVNKNMAE 93 Query: 65 KVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQR---------------GDDQRRIEKL 109 K + + ++ + + D L Q D +R + Sbjct: 94 KEWRAQSEAQMMSMDTNMRALAARAQRADQLEAQLAQGQAAQSTSGGGISPDTERVLSAY 153 Query: 110 GQDNAALAEQVKALGANPVTATGEPV--PQMPASPPGPEGEPQPGNTPVSFPPQGSVAVP 167 +N L + A +PV G P P +TP + +P Sbjct: 154 QNENEQLKAALAAARQSPVMGAGATPVGPNALYGRTSPPSYQTAPSTPAGQAAMAAAGLP 213 Query: 168 PPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEG 227 P VFT S Y+P S A A +I G Sbjct: 214 AGRGSEVS---LVSFNEGASGTGSPVPKGNTVFT-------DSANYLPPNSIAVAKVIVG 263 Query: 228 ADANASVTGNESTVPMQLRITGLV--EMPNSK--TYDATGCFVGLEAWGDVSSERAIVRT 283 DA A V +P+ LRITG N + T + GC V A GD+SSE+ V+ Sbjct: 264 VDAAAGVQSQTDPLPVVLRITGPARSVYDNGRLLTTNIAGCLVNGAARGDLSSEKVYVKL 323 Query: 284 RNISCL-KDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA 342 + ++C +G+ +KG ++F GK G++G VV R G ++G A+ AG G G+G Sbjct: 324 QRMTCPQPNGRYAVSDVKGFIAFGGKTGVRGRVVSREGSLIGQAFLAGLAGGFGRGFAAN 383 Query: 343 SQPAVGL------GATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAG 396 + + G G GD+L+ G+G G + + +S Y I+RAEQY PVI + G Sbjct: 384 TNSTLTGTNVNVNGQRQKLGTGDILEGGLGEGIATSGDMVSKYLIERAEQYQPVIEMPTG 443 Query: 397 NEVTVVFQDGFQL 409 +V +VF +G + Sbjct: 444 IDVEIVFLEGVFI 456 >UniRef50_B7J829 Conjugal transfer protein, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J829_ACIF2 Length = 543 Score = 229 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 86/439 (19%), Positives = 165/439 (37%), Gaps = 32/439 (7%) Query: 35 DVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDV 94 S + + Q+ + +T ++ K Q + Q++ +++ E ++ Sbjct: 73 ITPQSLQAQIASTQKQLKSLTKIIAEENGVKSSQMKDLKGQMSQEVLKEIQENEKK--HA 130 Query: 95 LNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGE------ 148 L Q Q++I L Q+ L + + N V P P MP + P Sbjct: 131 LQLQNPATQKQIAALTQEIKTLKAEKQQPVYNQVAPGVAPAPSMPVNTWSPAQPIEILGE 190 Query: 149 ----PQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPP--PQVTYQSVPVPNRIQRKVFTR 202 P ++ P ++ P P P V+Y ++ V Sbjct: 191 GGVASSPSTNGIAPPTAPAIPGTPGAHGVPTAPAIAGRRPTVSYHQPKTLKQLGGTVKVS 250 Query: 203 NEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDAT 262 N+ + Y+P+ + +LI G A + + +RI +PN + Sbjct: 251 NKK----TGIYLPASTILTGVLINGVIAGTGPDSKHNPQIVDIRIKKKAILPNGLRINLE 306 Query: 263 GCFVGLEAWGDVSSERAIVRTRNISCLKD--GKTIDMPIKGHV-SFRGKNGIKGEVVMRN 319 C V +G ++ R +RT +SC+ G I PI +V S G G+ G+V+ Sbjct: 307 NCEVLASGYGSMNERRVFMRTDTLSCVNRRTGNVISAPIHAYVVSSGGHGGVPGKVISHQ 366 Query: 320 GKILGWAWGAGFVDGIGQGMERASQPAVGL----GATAAYGAGD---VLKMGIGGGASKA 372 G + ++ +G G+G ++ ++ L G+ +Y + + GG S Sbjct: 367 GPAMLKSFLSGIFSGLGNAIQPNQVDSLSLNPQSGSAQSYQMPSLGYMGGSALAGGISTP 426 Query: 373 AQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL----KTVEEMALERTQSRAEEDN 428 A +S +Y+ AE P I + G V+++ + G ++ +T ++A + QS + N Sbjct: 427 AGEISKFYLHEAESELPTIEVNPGVSVSMIIETGVRVHVHGETKGQLAEAQYQSASSISN 486 Query: 429 PESPVPVPPSAESHLNGFN 447 P ES + + Sbjct: 487 SPQGGPALTPGESMQSPYG 505 >UniRef50_Q2N5I1 Pilus assembly protein n=5 Tax=Erythrobacter RepID=Q2N5I1_ERYLH Length = 438 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 105/420 (25%), Positives = 170/420 (40%), Gaps = 21/420 (5%) Query: 5 NTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDD 64 + I +R++ L GI + + + A D G+V+ + Sbjct: 30 SQIAQRQKMLLAGIGAIALIGGGMFIFGGDGDEGGSDANGAATI----DTGGLVNR---N 82 Query: 65 KVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALG 124 ++ + ++L R + ++ +E L +NA + +A Sbjct: 83 LSQREFVASYGNRLDAQGRAI----KDLQQTQLPRPEIEQELEALRSENAQMRSDGQAAI 138 Query: 125 ANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQV 184 Q+ + P P P P G+ P P + Sbjct: 139 DAISAENANLRSQLSEAAKAPATAPPLPPPPAYGPGVGTRRAAQPPQGAPETQGGQLSLM 198 Query: 185 TYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQ 244 ++ + + R T S Y+P S+A A +I G DA+ V +P+ Sbjct: 199 SFGAETGKDGKPRAAETAPALLLEASRDYLPPNSYAPATVIVGVDASTGVASQSDPLPVV 258 Query: 245 LRITGLV--EMPNSK--TYDATGCFVGLEAWGDVSSERAIVRTRNISCL-KDGKTIDMPI 299 LRITG M +K T D TGC V A GD+S+E+ V+ ++C G+ + Sbjct: 259 LRITGPARSVMRGNKLLTTDITGCLVNGAARGDLSAEKVYVKLVRMTCAQPGGRFAVSEV 318 Query: 300 KGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQ-----PAVGLGATAA 354 KG +SF G++G++G VV R G ++ A AG V G G+G + G A Sbjct: 319 KGFISFAGRSGVRGRVVSREGSLVSQALLAGIVGGFGRGFSANANGIFAGQVGSDGQREA 378 Query: 355 YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 D+L G G GA +AA T+S Y I+RAEQY PV+ + G EV +VF DG +++ + Sbjct: 379 LSPTDILAGGFGQGAGEAADTVSRYLIERAEQYQPVVEMPTGIEVEIVFLDGVHVRSSSK 438 >UniRef50_C4K0M3 F pilus assembly protein TraB n=13 Tax=Rickettsieae RepID=C4K0M3_RICPU Length = 472 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 78/357 (21%), Positives = 127/357 (35%), Gaps = 21/357 (5%) Query: 69 HATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPV 128 T + + + ++ I + +D K + ++ + L E N Sbjct: 61 EVKTSLDLQEERQAREISGIEKAIDPRAKWTAEILNEVKNMQNHLEKLIE-------NKY 113 Query: 129 TATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQS 188 T + E N + Sbjct: 114 LETKTNIDDFSQKLESLE------NPREETILYDGNDFNNNQKIEDLLDNNVEQSIAAAP 167 Query: 189 VPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRIT 248 + R+ V + G + YI +GSFA+ +L+ G S P+ +R+ Sbjct: 168 TALVKRLLGYVKRADLGVKKDVKDYITTGSFARGLLLTGVVVGTGTNNAASPEPIMIRLV 227 Query: 249 GLVEMPNSKTYD-ATGCFVGLEAWGDVSSERAIVRTRNISCLKD-GKTIDMPIKGH-VSF 305 + + GD+SSERA R +S L GK I+ ++G + Sbjct: 228 DTAIFSKGYKTEQIKEAILIGSCTGDISSERAKCRLETVSLLNSHGKIIEKSVEGWLIGE 287 Query: 306 RGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVG-----LGATAAYGAGDV 360 G+ GIKG VV R+ + A G + GI Q + + ++ G A D Sbjct: 288 DGRPGIKGIVVDRSSDVARMAVLNGVLGGIAQFFQNQATNSIFPVSPITGQQNALKVQDS 347 Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMAL 417 LK G+ G A L+D+ IKRAE PVI + +G + VVF+ GF L+ +E A Sbjct: 348 LKAGVYAGTGNALAKLADFAIKRAESMSPVIVVASGRVIDVVFRKGFDLREDKEAAK 404 >UniRef50_D0Z4T3 TraB pilus assembly n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4T3_LISDA Length = 404 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 96/326 (29%), Positives = 149/326 (45%), Gaps = 24/326 (7%) Query: 18 IVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVT 77 +VV T SA+ YL+ ++ + E EP PD V+ + F K A Q T Sbjct: 34 LVVAATVSAMFAICYLAFKLITAPPQ--VEIEPEPDYEPVITSDFTQKDSLSALQAQQQT 91 Query: 78 AAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATG----- 132 +MQ + R+ D L++Q + +E+L E+ + N + A Sbjct: 92 IEKMQTTINGLVRQRDSLSEQI---KSGMEQLDTRFTKAFEEAQRNWLNDMDALQERMNN 148 Query: 133 EPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVP 192 +P P +P P G N V+ P G+++ P +YP + + +PV Sbjct: 149 QPPPIVPDMNEFPSGHSDNPNGRVNPDPFGTLSDQEP--YYPKPYPREYDKPDLKDIPVS 206 Query: 193 NRIQRKVFTRNEGK-------QGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQL 245 R + F+ + + + S Y+P+GSF A+LI ADANA V T P+ Sbjct: 207 KRQGIQTFSYSWPRAGSQTVYRRSSENYVPTGSFVTAVLIGAADANAGVNAQGDTAPILF 266 Query: 246 RITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCL---KDGK--TIDMPIK 300 R +PN K GCF +G++SS R I R +N+SC+ + GK ID+P++ Sbjct: 267 RAIHNGILPNGKRSHLKGCFFTASVYGEISSNRGIARLQNMSCIFEKQKGKEEIIDIPVQ 326 Query: 301 GHVSFRGKNGIKGEVVMRNGKILGWA 326 G G+NG++G VMRNGKI+ A Sbjct: 327 GTAFNFGRNGMRGTPVMRNGKIMQMA 352 >UniRef50_C1SHE3 TraB pilus assembly protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHE3_9BACT Length = 391 Score = 217 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 95/415 (22%), Positives = 158/415 (38%), Gaps = 54/415 (13%) Query: 8 VKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVR 67 K+K +V+ + I +Y + Sbjct: 14 TKKK---LNIAIVLFIGAVILTLMYYASGASKKRP------------------------- 45 Query: 68 QHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAAL---AEQVKALG 124 A V A + + L ++K+ GD +R+E+L A L + +A Sbjct: 46 -AAVQRTTVNAKNFSAKEDRNTSLLLGIDKKFGDVLKRVEELENRKADLSFNNQPYQAQE 104 Query: 125 ANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQV 184 + V A GE Q + G + + ++ P T + Sbjct: 105 PDKVIAAGETDFQKSVNSGGMRYPQE----------ENNLEFDKPKDKKSRPTETIISGI 154 Query: 185 TYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQ 244 Y S+ VP ++ + + Y+PS S KA+L+ G A S G + P+ Sbjct: 155 DYISISVPQETEQ------KKSNPAKVNYVPSNSIFKAVLLTGVYAKTSTQGKSNPTPVI 208 Query: 245 LRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGK--TIDMPIKGH 302 R+T L PN + GC+VG EA ++S ER R + SC+ + +D+P+ G Sbjct: 209 FRLTDLSFFPNEVRRNLAGCYVGGEAHAELSDERVHTRLTSFSCITSDRRQVVDIPVTGR 268 Query: 303 V-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME-RASQPAVGLGAT--AAYGAG 358 V G GI G+V+ + L A +GF++G +G S V + T Y Sbjct: 269 VQGGDGSVGIAGKVISKQEAALLLAGVSGFIEGGAEGFSAANSTQNVNVFGTSEQTYTDD 328 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 + + IG G K+A L+D++ ++ PVI G EV ++ GF L+ E Sbjct: 329 QIARNAIGKGVGKSAGVLTDFFEDLLQEIKPVIHAQGGQEVELIISKGFSLEMEE 383 >UniRef50_Q3IUW6 Putative conjugative transfer factor, TraB n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW6_RHOS4 Length = 417 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 103/377 (27%), Positives = 159/377 (42%), Gaps = 25/377 (6%) Query: 59 DTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAE 118 + D+V + + A+ + R ++D LNK + ++ + + A+ E Sbjct: 41 SSGAPDRVDETIIADRTSNASPELSWARQSREQIDQLNKTVTELTNTVKGMAEKQASDLE 100 Query: 119 QVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQ----GSVAVPPPTAFYP 174 +++ + + + P P + G Q G P Sbjct: 101 ELRTQYDEVIVQQQAEINSLKTGAPVPAVGGETGEAQAPGYGQEFVSGGTRTPAAGRAGQ 160 Query: 175 GNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLP-------------YIPSGSFAK 221 G P V FT + P+ P YIP+GS+A Sbjct: 161 GGAAGPGAPGAAPMVQRFGAGASVDFTLQPKPEKPTTPEEESSRNVRDLHSYIPAGSYAP 220 Query: 222 AMLIEGADANASVTGNESTVPMQLRITGLVEM-----PNSKTYDATGCFVGLEAWGDVSS 276 A++I G DA+ V ++ VP+ +RITG + + TGC V A GD+SS Sbjct: 221 AVVISGVDASTGVVSRDNPVPVLVRITGPAVTAAAGAGAGRRINLTGCTVLGSAMGDLSS 280 Query: 277 ERAIVRTRNISCLKDG-KTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGI 335 ER VR ++C+ G K I+ + G V+ GK G++G VV R G + A AG + G Sbjct: 281 ERVYVRLTTLTCMGRGNKVIETQVAGLVAGSGKAGVRGHVVSREGNLATNAAIAGALGGF 340 Query: 336 GQGMERASQPAVGLGATAAYGA--GDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPI 393 + + A+ A G+ G +GGGA+ AA L++YYIKRAEQY PV+ + Sbjct: 341 AKALTSAASIASSNDGAETVGSVLGGAGAGVVGGGAASAADRLAEYYIKRAEQYQPVVSL 400 Query: 394 GAGNEVTVVFQDGFQLK 410 AG V VVF +G LK Sbjct: 401 YAGTNVEVVFMEGVSLK 417 >UniRef50_A0R7R0 TraB pilus assembly family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7R0_PELPD Length = 468 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 92/451 (20%), Positives = 165/451 (36%), Gaps = 51/451 (11%) Query: 11 KQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHA 70 KQ + + + T+ A+ S E + D++ ++T +K R+ Sbjct: 19 KQRKTIVLALAFTSVAVIALFGWSQSRAKIKPVNTEEPKKRKDIS--IETGMLEKKRE-- 74 Query: 71 TTEMQVTAAQMQKQYEEIR--RELDVLNKQRGDDQRRI-EKLGQDNAALAEQVKAL---- 123 + Q +++KQ + I+ + +D D + G+D + A Sbjct: 75 -LDNQAEVERLKKQIDAIKNGKPVDENGDPLPDGADPFTDPAGKDGTGVVPGSLAPKIGP 133 Query: 124 ---GANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 G N V G+ + P + PG + S+ PP + N + Sbjct: 134 IKSGQNQVGPNGQRLGNQPQGGQQGNAQSGPGGVGNNQVAGMSLPPLPPGSSKGRNSIPG 193 Query: 181 PPQVTYQSVPVPNRIQRKVFTRNE------------------------------GKQGPS 210 P P K+ + Sbjct: 194 MPTTGGIPGVPPGTPGGPGVPGAAMITRQEMGEISIVSYEKRAGDSKSRSDKYGKKKATT 253 Query: 211 LPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEA 270 Y+P S+ +A L+ GA + + + +P+ LR+ +PN GC++ + Sbjct: 254 TVYLPP-SYMEATLLSGAYIPTTESAKGNPMPVLLRVKTPAFLPNEAKAAVKGCYIIADG 312 Query: 271 WGDVSSERAIVRTRNISCL-KDGK-TIDMPIKGH-VSFRGKNGIKGEVVMRNGKILGWAW 327 ++++ERA + ++SCL K G+ ID +KG + G GI G+VV + G ++ + Sbjct: 313 KANLATERAEMTIVSMSCLDKKGRAVIDQKVKGWLIDSDGVAGIGGKVVAKMGTMVARSL 372 Query: 328 GAGFVDGIGQGMERASQPA--VGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAE 385 AGF GIG ++ A+ LG T + D G+GGG S + + +Y+ A+ Sbjct: 373 IAGFAGGIGDALKAAATTTSVSALGTTQSIDPKDAAMAGVGGGLSNGFKEIQKFYLDLAK 432 Query: 386 QYHPVIPIGAGNEVTVVFQDGFQLKTVEEMA 416 Q P + I VTV +G L Sbjct: 433 QTMPTVAILPSKTVTVAISEGVVLNIKPING 463 >UniRef50_A0L342 TraB pilus assembly family protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L342_SHESA Length = 452 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 75/384 (19%), Positives = 148/384 (38%), Gaps = 13/384 (3%) Query: 40 GNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQM-----QKQYEEIRRELDV 94 +G+ +A ++ + + +D + ++ + QV QM QK+ E I ++ + Sbjct: 72 TSGQLIAMRKKIQEREKAIDAQYTEQKASEKRIQQQVDTLQMSQLESQKRLETIAHQMQM 131 Query: 95 LNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNT 154 L +Q+ + A E + + + P P Sbjct: 132 LVEQQSKNAATARDSVSAKGARPENIAQQAPSLPSTEFSLDPMASLKSNVAMTPPASKTL 191 Query: 155 PVSF-PPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY 213 ++ A GN T QV ++ ++ + + + Sbjct: 192 TMNRGDVSLGKAAATGDEANVGNASTAKNQVAAKAKQAISQENTGSI---KKTEKEPETW 248 Query: 214 IPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGD 273 + +G+ +L+ G S + + P+ L+I + MPN T D GC V A G Sbjct: 249 LSAGTVIPTVLLTGQHVPTSSSAQSNPAPVLLKIVDVGVMPNGFTIDLVGCTVIGAARGS 308 Query: 274 VSSERAIVRTRNISCL-KDGKTIDMPIKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGF 331 S+ R +R +ISC+ + G+ I+ P V G +GI ++V G+++ ++ AG Sbjct: 309 ASTRRVEIRAESISCIDQRGRAIEQPFIAAVQGQDGHSGIPAKLVTLYGEVVKQSFWAGI 368 Query: 332 VDGIGQGMERASQPAVGLGAT-AAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPV 390 Q + +A+ V + + GG+S A ++D+Y++ A++ P Sbjct: 369 YGTGAQTLTQAATNRVSGDVVYDGTYFKNTATSSLAGGSSTAFDKIADFYLQLADEARPY 428 Query: 391 IPIGAGNE-VTVVFQDGFQLKTVE 413 + + G E V ++ Q G LK Sbjct: 429 LEMHGGIEGVDLIVQRGVSLKYKG 452 >UniRef50_B0RL09 TraB pilus assembly family protein n=2 Tax=Yersinia RepID=B0RL09_YEREN Length = 416 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 85/397 (21%), Positives = 148/397 (37%), Gaps = 30/397 (7%) Query: 25 SAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQ 84 I + + +G+ +P+P + V DT D ++ ++Q + Sbjct: 38 GTIASFIIIIFGFYYASGKAETVNKPIPKTSVVADTAEDKLLKDDVVAQLQGDIKDSNAK 97 Query: 85 Y--EEIRRELDVLNK-QRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPAS 141 + ++ D++NK + L + N + ++ LG+ S Sbjct: 98 ITDDVAKKIQDMINKGEFKLAPTPPVNLAEANISPVKENNELGSTTGNPV-------EFS 150 Query: 142 PPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFT 201 P P E P ++ S P G+ PP A G + P Sbjct: 151 YPQPLSESSPVSSDNSTPVDGTT---PPDAGPIWLGDIAIDNSAFTQPPA---------E 198 Query: 202 RNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDA 261 N K+ +P G F KA L+ G +A G E+ + R+ ++PN + Sbjct: 199 VNTEKKNQIQ--LPVG-FMKAHLLVGVNALTGEFGAENPQTVMFRVQAPAQLPNFIKMNL 255 Query: 262 TGCFVGLEAWGDVSSERAIVRTRNISCLKDGK--TIDMPIKGHVSF-RGKNGIKGEVVMR 318 +GCF G++S ER I ++ C+ K ++ IKG VS GK + VV R Sbjct: 256 SGCFSVANVTGNLSMERIIALPISMHCITRDKRFIVEGSIKGFVSDRDGKRDMSARVVSR 315 Query: 319 NGKILGWAWGAGFVDGIGQ--GMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTL 376 G +L A ++G G + +Q LG+ D+ K G + + Sbjct: 316 AGPLLASTIFAKSIEGFANVVGSQGVTQNVSALGSVNTIKNEDLAKTAATQGLAGGLSEV 375 Query: 377 SDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 Y + A+Q P + G+G +V + Q+ L+ E Sbjct: 376 GKYLLDLAKQTAPALETGSGKDVMLFIQETATLEIKE 412 >UniRef50_Q19NS7 ThrB n=10 Tax=Enterobacteriaceae RepID=Q19NS7_ECOK1 Length = 455 Score = 178 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 86/445 (19%), Positives = 163/445 (36%), Gaps = 45/445 (10%) Query: 10 RKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVV---DTTFD--- 63 +K + + + + + +Y+ + ++ DM + D+ + Sbjct: 8 KKAWENKTVRLSVIGALLVVIVYIISQSIFSTPVKKEKKTQKKDMQTNLLLDDSQMNKLS 67 Query: 64 --------------DKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKL 109 +++ Q+A E + A + Q++ + L +Q ++ Sbjct: 68 NEESQKVYKEMVKQNRLDQNAAKEDREKAEKAQQETKAQVASLTSQLQQLSQQINDMQTN 127 Query: 110 GQDNAALAEQVKALGANPVTATGEPV--PQMPASPPGPEGEP--QPGNTPVSFPPQGSVA 165 N L N P + P N+P+ Q S+ Sbjct: 128 RNGNRNLDAGSSRKTINEQAPAAPYQLNANAPINGVNPNYASITPTRNSPMRTITQSSIK 187 Query: 166 VP-----------PPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYI 214 G V + ++V R+ ++ ++ Sbjct: 188 TNGTDGVIQVMPVSENRIKEGREVIAGDKAPTRTVRGDGTAPVDSKARHAARKDEM--FL 245 Query: 215 PSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDV 274 P+ S +LI G +A S++ +P+ +RI V MPN+ T D C + A GD+ Sbjct: 246 PATSIITGVLITGLEAPTSLSSKSEPMPVTMRIKKDVIMPNNFTMDLRDCNLLGSAVGDL 305 Query: 275 SSERAIVRTRNISCLKD-GKTIDMPIKGHV--SFRGKNGIKGEVVMRNGKILGWAWGAGF 331 +S+RA +R +ISC+ GK D+ ++ + GKNGI+G ++ RNG + A AG Sbjct: 306 ASQRAYIRATSISCVNSKGKAFDVKLEAYAVSENDGKNGIRGTLISRNGNAIAGAAFAGG 365 Query: 332 VDGIGQGMERASQPAVGL--GATAAYGAGDV---LKMGIGGGASKAAQTLSDYYIKRAEQ 386 + + + + ++ + + A Y + + + G A L DYY AEQ Sbjct: 366 LSSLAGSLSPSKVSSLNIDPNSQAQYQSPNFGALGALAGAGAAQGGLNRLVDYYTAIAEQ 425 Query: 387 YHPVIPIGAGNEVTVVFQDGFQLKT 411 P++ I G +T V Q G + T Sbjct: 426 QWPIVEISPGRAITFVVQTGTTIPT 450 >UniRef50_A5IEK4 Exported membrane protein n=4 Tax=Legionella RepID=A5IEK4_LEGPC Length = 437 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 58/431 (13%), Positives = 130/431 (30%), Gaps = 47/431 (10%) Query: 14 LWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQ--HAT 71 G+ ++ AL + + V +P ++ + + F+D +R Sbjct: 3 KNAGLKILTVTVIAVVALIMMNSKHHDREPEVTRPDP-NNLNEAIASQFNDNIRDVAARL 61 Query: 72 TEMQVTAAQMQKQYEEIRRELDVLNKQ-RGDDQRRIEKLGQDNAALAEQVKALGA----- 125 E + A ++ + +++R + + + + + IE+L + A + ++ Sbjct: 62 QETEKKLANLESENKQLRSKKENVQASYNPEVIKEIEQLKSELANVKTSQESQQNSQPYT 121 Query: 126 -NPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQV 184 N + + E P + + P + Sbjct: 122 VNGESTLAKEQSVKDIDALLMNRESNPNEQAYWEGLKKTKQALTPKVKTAALNSKDKKSI 181 Query: 185 TYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQ 244 Y ++P + + R + P + F + +I D A N +P Sbjct: 182 PYYTIPAGSDLGRTTLLSALIGEVPVEGKLMQPLFPFSAIINRGDLMA---ANGIPLP-- 236 Query: 245 LRITGLVEMPNSKTYDATGCFVGLEAWGD-VSSERAIVRTRNISCLKDGKTIDM---PIK 300 PN G +G+ ++ D +S RA V T + DG + + + Sbjct: 237 ---------PNISGMKVNGYAIGVGSFLDNISCVRAYV-TSALFVFDDGHFVTVGKEQMT 286 Query: 301 GHV------------SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP-AV 347 G + G IKG+ ++L + + G G + + Sbjct: 287 GTAEMVNNESLGYLTTAFGNPCIKGQYFTNAPRVLTALVASDGIKGFGNALSQWQMSYTA 346 Query: 348 GLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGN-----EVTVV 402 G + +GG S+ +D+ KR + ++ + A +++ Sbjct: 347 NANGATGIPTGSMGNYALGGALSQGTVKAADWLEKRIQGSFDMVFVPASQGYRPTQLSFH 406 Query: 403 FQDGFQLKTVE 413 L Sbjct: 407 VTQTINLDKET 417 >UniRef50_A9AU14 Putative uncharacterized protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AU14_BURM1 Length = 453 Score = 177 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 86/364 (23%), Positives = 134/364 (36%), Gaps = 27/364 (7%) Query: 78 AAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGAN-PVTATGEPVP 136 + Q +++++ L K D + A A+ P + G Sbjct: 95 LEDLAAQVGSLQQQVVTLTKAVSDGKAGGAPDASKLTTTWTPASAPSASTPTPSDGSNNS 154 Query: 137 QMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQ 196 + P QPGN P S + A + PP ++ V Sbjct: 155 PLGKDLPDAVNFDQPGNRPSSASGSIAGTAAADPAAFAAARPAEPPAPARPTLVVDKPAP 214 Query: 197 RKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTV-----------PMQL 245 N P P S +A+++ G +A N P Sbjct: 215 STASAGNPK----PDPTFPIYSGIEAVMLSGFNARQGG-SNGGPAGAVTKAIDVGAPFVS 269 Query: 246 RITGLVEMPNSKTY-DATGCFVGLEAWGDVSSERAIVRTRNISC-LKDGKTIDMPIKGH- 302 R+ G MPNS D CF+G A +S+ERA V + ISC K+G+ + I + Sbjct: 270 RVKGATIMPNSWKSSDLENCFIGGSATAVLSAERAYVISDKISCVFKNGEIYEGDIVAYG 329 Query: 303 VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERAS----QPAVGLGATAAY--- 355 + G G+ G+VV + G +L A G G+G + + V G+T AY Sbjct: 330 LDVDGNLGLAGKVVNKQGSMLMQAALTGMAAGLGSALAPTAVSSYNSNVSAGSTGAYTYP 389 Query: 356 GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEM 415 +L +G G +KAA LS +Y+ A++ PVI + AG VT + + LK Sbjct: 390 SPSFLLGTSVGTGVNKAATELSQFYLNFAKETFPVIEVTAGTRVTWILKQALTLKRKTPP 449 Query: 416 ALER 419 +R Sbjct: 450 KDQR 453 >UniRef50_C7N9P2 Conjugation TrbI family protein n=1 Tax=Leptotrichia buccalis C-1013-b RepID=C7N9P2_LEPBD Length = 449 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 65/417 (15%), Positives = 121/417 (29%), Gaps = 36/417 (8%) Query: 17 GIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQV 76 I++ + I ++Y + + EQE V ++ + +D V A QV Sbjct: 50 IILICIISGLIFASIYFA--NQVKKNMKSNEQEKVDSISTGTELDINDAVNTQANKNPQV 107 Query: 77 TAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGA----------- 125 + Q E I D +N A + Sbjct: 108 SETIAQSGTENINTASDKTGTPNLSQYDSQLGSDYNNDNFDSSYGASTSPPSFSNVSENE 167 Query: 126 --NPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQ 183 N + P + G + +T P+ P + Q Sbjct: 168 NTNTSATSVAPSEKYKEWRKSSIGFDKGVSTQTPQVPEQYQEQQPASQNTQQQNENDTDQ 227 Query: 184 VTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGA--DANASVTGNEST 240 +S + + ++ F K Y + +GSF A+L+ D V Sbjct: 228 NKQKSKSLFLKQKQDSFYSTNLKNPAIGKYELKTGSFIPAVLVTAINSDLPGDVIAQVRE 287 Query: 241 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK 300 R + +P G + +G R ++ + + +G T+ + Sbjct: 288 NVYDYRTGKNILIP--MGTKIIGKYDSSITYGQ---NRVLLIWQRLV-FPNGSTLVLDNM 341 Query: 301 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV 360 V G G+KG+ K++ + ++ I G + G+ + Sbjct: 342 QGVDLLGNAGLKGKTNNHFWKLMRSVLLSSAIN-IASGSLEGLNVNIETGSRSRVN---- 396 Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQ---YHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 IG G S AAQ + + E+ P I I G + + L + Sbjct: 397 ----IGTGVSDAAQNIRSIGERIIEKDLNRQPTIEIKRGKKFNIFVSKDIILSPYRK 449 >UniRef50_Q4QPC9 Conserved putative exported protein n=5 Tax=Haemophilus influenzae RepID=Q4QPC9_HAEI8 Length = 466 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 72/465 (15%), Positives = 129/465 (27%), Gaps = 43/465 (9%) Query: 6 TIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQE-----PVPDMTGVVDT 60 +K + ++ + + S + ET E + Sbjct: 1 MQMKANKAFYVIGGITALVVTLMAGFLFSGSSSTNTAETKKEDTLDISFKDLSPEELRAM 60 Query: 61 TFDDKVRQHATTEMQVTAAQMQK-------QYEEIRRELDVLNKQRGDDQRRIEK-LGQD 112 + + + + K Q E + +E + L Q + +I++ + + Sbjct: 61 GIEGDTSKDTVRTLIGKVKEHNKRFDEVILQNERLVKENEQLKNQANNTDYQIQQAVQAE 120 Query: 113 NAALAEQVKALGANPVTATGE--PVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPP-- 168 AL ++ AL V A + A+P P P G V P Sbjct: 121 TGALINEINALKDQVVQAGNQVVGNGNAQANPNAPLPINGATTGPQVETRGGINWVNPSD 180 Query: 169 PTAFYPGNGVTPPPQVTYQSVPVPNRIQRKV---------FTRNEGKQGPSLPYIPSGSF 219 V + P V + G P + Sbjct: 181 MPTTDRQGNALQGIGVNGAGIGFPKTFDNNVNDIRKSNDGLQSSTGNNAIFNTATPFFTI 240 Query: 220 AKAMLIEGADANASVTGN-------ESTVPMQLRITGLVEMPNSKTY-DATGCFVGLEAW 271 A + + A ++ G P +L I + N D G V A Sbjct: 241 AANSTLTNSVAMTALVGRVPIDNKVTEPYPFKLLIGRDNLIANGIELPDIEGAIVSGTAS 300 Query: 272 GD--VSSERAIVRTRNISCLKDGKTIDMPI----KGHVSF-RGKNGIKGEVVMRNGKILG 324 GD +S R V++ DG+ + G +S G I GE + L Sbjct: 301 GDWTLSCVRGDVKSLTFV-FSDGRIVSTDNSDDKIGWLSDPHGVPCIPGERRTNAPEYLT 359 Query: 325 WAWGAGFVDGIGQGMER-ASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKR 383 + QG+ S V GA G+ K +G + +D++ +R Sbjct: 360 TNFFLTGASAAAQGLSSSQSTTVVDGGAVIGAVTGNNGKYILGQALGGGLRETADWFRQR 419 Query: 384 AEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAEEDN 428 Q + + G EV V + + + + + N Sbjct: 420 YGQMFDAVYVPPGKEVAVHIEKQIDIDYDRMSRKVKYGQASRQSN 464 >UniRef50_Q5ZWU4 Exported membrane protein n=4 Tax=Legionella pneumophila RepID=Q5ZWU4_LEGPH Length = 419 Score = 168 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 142/448 (31%), Gaps = 78/448 (17%) Query: 18 IVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVT 77 + + + S + + + P + + + F+D +R + Sbjct: 6 GIKILSGSVVFAVVMILINSRHSTPIHDDTPNP-NNFHEAITSQFNDNIRD-----VSAR 59 Query: 78 AAQMQKQYEEIRRELDVLNKQRGDDQRRIEK-LGQDNAALAEQVKALGANPVTATGEPVP 136 + +K+ E++ +E L KQ + L + L E++ AL Sbjct: 60 LLETEKKLEQMHKENKSLQKQLKQPIQEASHTLQDELQTLKEKLSALTD----------- 108 Query: 137 QMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQ 196 + S+P +G+ A + P + + Sbjct: 109 ----------------HQTQSYPMEGNQASISGRIKDLDGLLDKAP------IESKIFAE 146 Query: 197 RKVFTRNEGKQGPSLPYIPSGS-FAKAMLIEGADANASVTGN-ESTVPMQ--LRITGLVE 252 + T+ E IP+GS F+K L+ V G + + G + Sbjct: 147 QDTTTKEEAPTKTPFYTIPAGSDFSKVTLLSALMGEVPVEGKLMQPLFPFTAMVSRGDLM 206 Query: 253 MPNSKT-------YDATGCFVGLEAWGD-VSSERAIVRTRNISCLKDGKTIDM------- 297 N +G +G+ ++ D +S RA V T + +DG + + Sbjct: 207 TANGMQLPEEIIGMKISGYSIGVGSFLDNISCVRAYV-TAALFVFEDGHFVSIGQEQMKS 265 Query: 298 -------PIKGHVS-FRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGL 349 G+++ G IKG+ + ++L AG + G G + + Sbjct: 266 SAELVNNDSIGYLTTQFGNPCIKGQYITNAPRVLTAFMAAGGIQGAGNALSKWQMSYQAE 325 Query: 350 GATAAYGA-GDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNE---------V 399 G +A GD+ GG ++ +Q ++D+ KR + ++ + A Sbjct: 326 GGSAIATPTGDLAHFAAGGAINEGSQKITDWLEKRIQGSFDMVFVPASIRSHSGFIPNQF 385 Query: 400 TVVFQDGFQLKTVEEMALERTQSRAEED 427 + F + + + +++ Sbjct: 386 NLHFSQTIAIDKEHQGRVLDYGYHQQKN 413 >UniRef50_C6DZ83 Conjugation TrbI family protein n=1 Tax=Geobacter sp. M21 RepID=C6DZ83_GEOSM Length = 410 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 65/415 (15%), Positives = 119/415 (28%), Gaps = 37/415 (8%) Query: 11 KQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHA 70 + L V+ T SAI ++ + + + A + D + Sbjct: 22 RINRRLIAVISATVSAIVAFALVAGLSPKESAKGEAAVRQPQEKNQT-SPGLPDPLVSAP 80 Query: 71 TTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTA 130 T + A Q R + + + Q + + G + Sbjct: 81 GTYAEAKAKSSQ------RPTPRQNPEPAKEPTAPVASPLQPAYTVTAPGQPPGERGESQ 134 Query: 131 TGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVP 190 + Q + P G+ + P P+G + VPP PG P Y Sbjct: 135 AQK-DAQTAINSPVTFGQNEAPQQPKQEEPRGGLMVPP---LPPGIAGMPQAVERYADDQ 190 Query: 191 VPNRIQRKVFTRNEGKQG---------PSLPYIPSGSFAKAMLIEGA--DANASVTGNES 239 +R+ + + S I +G+ A LI G D + Sbjct: 191 NLQGEKREFSRERQAELPYIKTTLIAPISQYEIKAGTILPATLITGINSDLPGQIVAQLR 250 Query: 240 TVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPI 299 + +P G + A+G ER +V + L +G +I + Sbjct: 251 ENVYDSVTGNHLLVPQGTR--LIGEYDSKVAFGQ---ERVLVIWTRLI-LPNGSSIGLEG 304 Query: 300 KGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGD 359 + G G+ G+V GK++ + Q V +G A Sbjct: 305 MPGIDLSGYAGMTGKVNNHYGKLITGVVLGSVIGAGAQ---------VAVGGQGAPNVPP 355 Query: 360 VLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 GA++ + + + P I + G+++ V LK E Sbjct: 356 SFGQLAVSGAAQNINQTAQRHTDKVLNMQPTIEVTPGDKINVFVTKDMILKPFTE 410 >UniRef50_D0SZZ2 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZZ2_ACILW Length = 485 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 53/344 (15%), Positives = 92/344 (26%), Gaps = 15/344 (4%) Query: 75 QVTAAQMQKQYEEIRRELD-VLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGE 133 + + E RR +D L ++ + Q + +L +Q + G Sbjct: 153 DIANKRRIMLLEAERRNIDMRLQAKQAEQQAVFQSKMNRLQSLEQQRANSQNDLGAVLGA 212 Query: 134 PVPQMPASPP--GPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPV 191 P S G QP + + Sbjct: 213 PTSTGNNSAGLRSVNGSQQPNSGLNGLLGGAGGQDSFMPGGGGNKDDMYSINRQGEKEQW 272 Query: 192 PNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGL 250 R F + P Y + +G+ A L+ G +++ T Sbjct: 273 TQRPSNDNFYLAKALIDPMSDYEVKTGTVIPATLVTGMNSDLPGQIIGQVRQNVYDSTSG 332 Query: 251 VEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNG 310 + + G + G +R +V + I +G ++ + G G Sbjct: 333 RFLLIPQGSKLIGTYDNGVTMGQ---QRGLVAWQRII-FPNGSSMSLGTMQGTDKAGYAG 388 Query: 311 IKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGAS 370 K +V G+I G A +GQ G T + D + + Sbjct: 389 FKDKVDNHYGRIFGQATLISMFSALGQ------IAVSDNGNTNRSNSQD-NRETLAEELG 441 Query: 371 KAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 + IKR P I I G E V+ LK + Sbjct: 442 RQWSQTGQELIKRNLNIAPTIRIRPGYEFNVMVNKDMILKPYGK 485 >UniRef50_A5TXL6 Possible conjugal transfer protein TrbI n=3 Tax=Fusobacterium RepID=A5TXL6_FUSNP Length = 400 Score = 148 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 99/312 (31%), Gaps = 31/312 (9%) Query: 107 EKLGQDNAALAEQVKA-LGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVA 165 ++ QDN + + N + SP +P V + Sbjct: 116 DEENQDNVEPQKSTEEIERENRLRQLESEADAAFRSPTTITIATRPQTQQVDNKVLLAQN 175 Query: 166 VPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLI 225 P Y GN + + N +K + N + S + +G F A L Sbjct: 176 GNKPVEDYDGNRQ------ESKKNFLMNEQAQKFYQTNFLVEQLSEFELKAGDFIPATLQ 229 Query: 226 EGA--DANASVTGNESTVPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVR 282 G D + V + ++ I+G + P G + +G ER +V Sbjct: 230 TGINSDLPSKVIVAVVSENVRDTISGKHILIPQGTR--VVGTYDSSVTFGQ---ERLLVV 284 Query: 283 TRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA 342 + + DGK+I + V GK GI GE+ G +L + + G + Sbjct: 285 WQRLI-FPDGKSIGLDNMQGVDLSGKAGITGEIDNHFGTLLKGVVLSSIMGSAGAIVT-- 341 Query: 343 SQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVV 402 + + GA + T+ D + +RA P I I G + ++ Sbjct: 342 -------------DRKNDWRGAAAEGAGEQIVTIGDRFAERALSRQPTINIEPGTRLNIM 388 Query: 403 FQDGFQLKTVEE 414 L+ E Sbjct: 389 VHSDLILEPYGE 400 >UniRef50_A9MS59 Putative uncharacterized protein n=3 Tax=Enterobacteriaceae RepID=A9MS59_SALAR Length = 445 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 58/388 (14%), Positives = 113/388 (29%), Gaps = 51/388 (13%) Query: 64 DKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKAL 123 + V+ +Q +++ R + +N+Q+ ++ +L +Q+K Sbjct: 79 ETVKASNAALVQENQRLREREQNTDSRISEAINRQQTSASQQQNELLNSLQTQIQQLKGN 138 Query: 124 GANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVP-PPTAFYPGNGVTPPP 182 + G + + P GEP P P P P +P +P P Sbjct: 139 RTTDDSLAGLGIDE----PEAASGEPLRWIAPADALPTDKNGRPLQPALAFPSAMHSPTP 194 Query: 183 QVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGN----- 237 Q + +P S + G+ A ++ G Sbjct: 195 QPEASPPAAVK----------------PVYTLPQNS-----TLIGSVAMTALLGRIPLNG 233 Query: 238 --ESTVPMQLRITGLVEMPNSKTY-DATGCFVGLEAWGD--VSSERAIVRTRNISCLKDG 292 P ++ I N D G + A GD +S R + + +DG Sbjct: 234 SVTDPYPFKVLIGRDNLTANGIELPDIEGAVISGSATGDWTLSCVRGSLTSITFV-FRDG 292 Query: 293 KTIDMPIKGHVSFRGK-------------NGIKGEVVMRNGKILGWAWGAGFVDGIGQGM 339 +P +G + G I GE + +G + Q + Sbjct: 293 TVRTLPAEGDKTGSGTEGNIGWLSDPHGLPCIPGERKSNAAEYIGSQFLLAGSSAAAQAL 352 Query: 340 ERA-SQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNE 398 + V G+ GD + +G + +D++ +R Q I + G Sbjct: 353 ANNQTTSTVEDGSITTALTGDSGQYVLGQALGGGLKESADWFKQRYGQMFDAIYVPPGQA 412 Query: 399 VTVVFQDGFQLKTVEEMALERTQSRAEE 426 V + + + ++ E Sbjct: 413 VAIHITRQLAIDYDPDGRRVNYRTAGER 440 >UniRef50_C2LLI8 Exported protein n=20 Tax=Proteobacteria RepID=C2LLI8_PROMI Length = 498 Score = 145 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 57/425 (13%), Positives = 109/425 (25%), Gaps = 53/425 (12%) Query: 49 EPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELD-VLNKQRGDDQRRIE 107 P + ++ T + RQ + Q ++ + + ++ E Sbjct: 63 TPADTLRTLIGTMKTVRDRQAELIAQNEKLLEENAQLRNRQQNVSGQIQSAVASVRQEAE 122 Query: 108 KLGQDNA----ALAEQVKALGANPVTATGEP-----VPQMPASPPGPEGEPQPGNTPVSF 158 + L ++ +LG + G+P +P G Sbjct: 123 SQQRALQQEQQTLMRRLDSLGETLTASGGQPAQGSGQGDIPLGLGLDTGGSGLTVKDGLL 182 Query: 159 PPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYI---- 214 + A P P T Q+ R Q + Sbjct: 183 WAEPQDAQPAEPGRMVNGQPAKPAFPTSFLEDNAITRQKAELDRVAKNQRTLSGTVDGEA 242 Query: 215 ---PSGSFAKAMLIEGADANASVTGN-------ESTVPMQLRITGLVEMPNSKTY-DATG 263 P+ + + + G+ A ++ G P ++ + N D G Sbjct: 243 HTEPAYTIPENATLVGSQAMTALLGRVPIDGKVTDPYPFKVVVGKDNLTANGIELPDVEG 302 Query: 264 CFVGLEAWGD--VSSERAIVRTRNISCLKDGKTIDMP----------------------- 298 + A GD +S R + + DG +P Sbjct: 303 AVISGSATGDWTLSCVRGDITSITFV-FTDGTIRTVPKPADRTDGGSQANSGQNARNNGG 361 Query: 299 IKGHV-SFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLG-ATAAYG 356 G + G I GE G L + G M ++ A G + Sbjct: 362 SLGWISDESGIPCISGERKTNAGTYLPTLFALTAAASAGDAMSQSQYTAQNNGYGITSSL 421 Query: 357 AGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMA 416 +GD K +G + ++D+ R Q + + G +V V + + Sbjct: 422 SGDAGKAALGSAIGGGFKDVADWVKSRYGQTFDAVYVPPGQKVAVHISRQIPVDYESQGR 481 Query: 417 LERTQ 421 Sbjct: 482 RVNYG 486 >UniRef50_C6N554 Exported membrane protein n=3 Tax=Legionella RepID=C6N554_9GAMM Length = 465 Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 52/406 (12%), Positives = 119/406 (29%), Gaps = 58/406 (14%) Query: 40 GNGETVAEQEPVPDMTGVVDTTFDDKVRQ--HATTEMQVTAAQMQKQYEEIRRELDVL-- 95 G + + ++ + + F+D +R + + ++ Q + + + L Sbjct: 29 GPSQAAESKADPNNLNEAISSQFNDNIRDVSARLVQTEQKMRAIEIQNKTLAEKNAELTA 88 Query: 96 ----------NKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGP 145 + + +E L ++ A L E G + G+ + PG Sbjct: 89 SKEEGGVVIRQELAPEVVETMEALKKELAQLKESQTPQGDSERYPLGQIASNGLLTAPGA 148 Query: 146 EGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEG 205 + + + + + K ++ Sbjct: 149 VYDIDN-------------QLMKHPLSEQEVSYWNKLNARRKQIQKSVVKKSKKIMPSQE 195 Query: 206 KQGPSLPY--IPSGS-FAKAMLIEGADANASVTGN-ESTVPMQLRITGLVEM-------- 253 ++ +PY IP+GS L+ + G + I ++ Sbjct: 196 EKETDIPYYTIPAGSDLGNTTLLSALIGEVPIDGKLMQPLFPFSAIISRGDLMASNGVPL 255 Query: 254 -PNSKTYDATGCFVGLEAWGD-VSSERAIVRTRNISCLKDGKTIDM-------------- 297 P+ +G +G+ ++ D +S RA V + + +DG + + Sbjct: 256 PPDISGMKISGYAIGVGSFLDNISCARAYVTSVLFT-FQDGHFVVVGKDQMSNSVDLVNN 314 Query: 298 PIKGHVS-FRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGL-GATAAY 355 G+++ G I G+ ++L G G+G + + A Sbjct: 315 ESLGYLTTAYGNPCIHGKYYTNAPRVLMAMMATGGAQGVGNALSQWQMTYFAGPNGATAA 374 Query: 356 GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTV 401 G GG S+ D+ KR + ++ + A + Sbjct: 375 PTGSFGPYAAGGALSEGTAKGGDWLEKRIQGSFDMVFVPASVPYRI 420 >UniRef50_C3WX80 Conjugal transfer protein TrbI n=3 Tax=Fusobacterium RepID=C3WX80_9FUSO Length = 373 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 41/243 (16%), Positives = 78/243 (32%), Gaps = 26/243 (10%) Query: 178 VTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGADANASVT- 235 S I + PY + +GSF +L+ G D+ Sbjct: 151 NNNVKTDISTSTEESKNITEDTEYNKYSIKEVKSPYELKAGSFIPGILVSGVDSQIEGKM 210 Query: 236 ---GNESTVPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD 291 E+ + I+G + P G + A+G +R ++ + + + Sbjct: 211 VGLVREN---VYDSISGKYLLIPKGTK--IIGEYSSGVAYGQ---DRILIIWQRLI-FPN 261 Query: 292 GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGA 351 GK+I + V G+KG V N ++L + + G + R+ + Sbjct: 262 GKSISLENFPGVDLSAYAGMKGRVNNHNIELLKSVILSSVLGGGAALVNRSKDTRI---- 317 Query: 352 TAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKT 411 + + G G +LS +R P I I G+ ++ L+ Sbjct: 318 ---QSWENAMASGAGERIIDIGDSLS----ERILNIKPTITIKPGSRFNIIVNADLILEP 370 Query: 412 VEE 414 +E Sbjct: 371 YKE 373 >UniRef50_B1ZQ46 Putative uncharacterized protein n=2 Tax=Opitutus terrae PB90-1 RepID=B1ZQ46_OPITP Length = 371 Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats. Identities = 54/368 (14%), Positives = 102/368 (27%), Gaps = 40/368 (10%) Query: 89 RRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGE 148 R + + R + ++G+ L E +++ T + Sbjct: 33 RNQAEQKQAARLAASAKKAEVGKVKVPLDEGLESGVPQQATVSDSAKENAGGRIVPFRPP 92 Query: 149 PQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQG 208 P P P S P + P P V + P P + Sbjct: 93 PAPTPAPASAPERAQTEAPAR--EKPPRKVRYQTLLAAYVPPAPRHVD----------PE 140 Query: 209 PSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGL 268 P ++P G+ K L+ D + + + I N + V Sbjct: 141 PPKRFLPYGTLLKCKLVNTVD-------SSNLETPVIAILLEDVWQNGQRVIPANTLVHG 193 Query: 269 EAWGDVSSERAIV-----------RTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVM 317 A +R R + + + + I G+ G G+KG V+ Sbjct: 194 TAKAGRIRDRVSANGTWRFVWQDGRELAFNGVALDREYEHDIDGYGITDGSGGMKGRVLA 253 Query: 318 RNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLS 377 + + + G +G + +Q A+G T + G+ G + Sbjct: 254 TDDLQELKMLASAALSGFARGTQDRTQTALGTTITGSVS------NGVREGVGDVFDLYA 307 Query: 378 DYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAEEDNPESPVPVPP 437 ++ E + + AG E V + + + + + A P S P Sbjct: 308 QRTLREIEANGYFVRVPAGKEFYVYVTESVNPEKAKIAGTKVEATAA----PTSASEAPT 363 Query: 438 SAESHLNG 445 S G Sbjct: 364 ENGSRAKG 371 >UniRef50_B3DV88 Type IV secretory pathway, VirB10 component n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DV88_METI4 Length = 400 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 109/328 (33%), Gaps = 25/328 (7%) Query: 99 RGDDQRRIEKLGQDNAAL-AEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVS 157 + +D+ ++ + AL E++ P P + + E P PV Sbjct: 74 QKEDKSSLKAVVPKEVALSKERISEPSLPPAQVKAPPQYKEKETLGFLEQPPPDRTAPVP 133 Query: 158 FPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSG 217 A+ + + + Y + T ++G L I Sbjct: 134 RGIVDQKALAKDSQSGDQPIIIKWAKKRYLFRNLSLSATETAGTEDKGGSEGPLANIDVN 193 Query: 218 SFAK-AMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDA----TGCFVGLEAWG 272 SFA +IE A N++ + N + + G V +P + +G G Sbjct: 194 SFAPQGEMIEAALVNSAFSSNTD-----VDVVGAVWLPFYFQGNLLLEPGDRLIGTSGGG 248 Query: 273 DVSSERAIVRTRNISCLKDGKTIDMPIKG-HVSFRGKNGIKGEVVMRNGKILGWAWGAGF 331 +R +V I KDG+++ PI+G + G GIKG V GK L A Sbjct: 249 SALRDRMMVHIDKII-FKDGRSL--PIQGVALHTDGTEGIKGYRVSEYGKQLLGPILAAM 305 Query: 332 VDGIGQGMERAS----------QPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYI 381 ME S P G A GA L +G + A Q + + Sbjct: 306 GQAFLYAMEYQSFNYYMSPYGLTPWGLYGQPAYNGAKQALMLGGMYAGTNAMQQVMNILA 365 Query: 382 KRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 + +QY P + + AG V + + Sbjct: 366 QDIDQYKPYVFVPAGTRFRVFLKSYMDI 393 >UniRef50_C3WYE2 Conjugal transfer protein TrbI n=2 Tax=Fusobacterium RepID=C3WYE2_9FUSO Length = 421 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 54/360 (15%), Positives = 112/360 (31%), Gaps = 43/360 (11%) Query: 84 QYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASP- 142 Q +E+ +EL ++ + + +++ ++N E EP P Sbjct: 71 QEKEVGQELKDIDYANRNTLKVVDEQLKNNYEEEEDPDIENPEYNIPATEPDPIEEYMKA 130 Query: 143 -------------PGPEGEPQPGNTPVSFPPQGSVAVPPPTAF------------YPGNG 177 P + +S S A+ G+ Sbjct: 131 QELKKLQRYYDAREAPFKKNANKIGDISTSELYSENETSTPAYSSDKEYLDYIMAGIGDN 190 Query: 178 VTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVT 235 T P + + N +N S + +G+ ++ D S++ Sbjct: 191 NTNPNMQKEKKQFLKNAAVNNFVLKNPLTPPISKFEVKTGTLIPVVITSSINSDLPGSIS 250 Query: 236 GNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTI 295 + +P G F +WG R ++ L +GK+I Sbjct: 251 AMVRENIYDTLTGTEILIPAGSK--LYGKFSSEVSWGQT---RVQAVFNRLT-LPNGKSI 304 Query: 296 DMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAY 355 ++ G +G++G+ G+V + GK++G AG V G + Sbjct: 305 NLGAMGVADAQGRSGLTGDVDLHLGKVIGSIIMAGVVGGADGALTNNGNYR--------- 355 Query: 356 GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEM 415 G+ G + + D Y + + P I + AG+ T++ ++ L+ ++ Sbjct: 356 KDGNSALSRAGEESGRTTVETVDKYTSKVLEVQPTIWVEAGSRATLMIEEDLILEKYDKS 415 >UniRef50_B0UVR9 Putative uncharacterized protein n=7 Tax=Pasteurellaceae RepID=B0UVR9_HAES2 Length = 484 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 70/483 (14%), Positives = 134/483 (27%), Gaps = 61/483 (12%) Query: 6 TIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGE-------TVAEQEPVPDMTGVV 58 + ++ LGIV + + S+ + E V M Sbjct: 1 MKANKALFVILGIVFILVGGIVYALFGRSESVPQPTQQEILDISIKDLTPEQVRTMGIQG 60 Query: 59 DTTFDD-KVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQ-RGDDQRRIEKLGQDNAAL 116 DT D + + ++ + +++++ D++N + KL + A L Sbjct: 61 DTPIDTLRTLVTTVKSNERRMDELIDENRQLKQKEDLVNGRINDAVNNETRKLQEQIADL 120 Query: 117 AEQV--------KALGANPVTATGEPVPQMPASP-------------------------- 142 Q+ T E P + Sbjct: 121 KMQLFDMATLVNNKPTTQESTPQVEAQPNTVPNKGFGTAGDKLPIGGATMSNVDTSGMYW 180 Query: 143 --PGPEGEPQPGNTPVSFPPQGSVAVPPP--TAFYPGNGVTPPPQVTYQSVPVPNRIQRK 198 P + PVS + P + Q Sbjct: 181 VEPSDQISLDASGKPVSGNTVATKFGFPKDFNGGQSAGNNEKKGLPFFPETDTVTSSQGT 240 Query: 199 VFTRNEGKQGPSLPYIPSGS-FAKAMLIEGADANASVTGN-ESTVPMQLRITGLVEMPNS 256 Q S+ IPS S F ++ + G + P ++ I + N Sbjct: 241 AGNARGKNQMTSVYTIPSNSTFLDSVAMTGLIGRIPIDNRVSDAYPFKVLIGRENLIANG 300 Query: 257 KTY-DATGCFVGLEAWGD--VSSERAIVRTRNISCLKDGKTIDMPIKGHV-------SFR 306 D G V A GD +S R V++ DG+ + KG+ Sbjct: 301 IELPDVDGAIVSGTATGDWTLSCVRGSVKSMTFV-FNDGRIVSTSNKGNGEEIGWLSDSS 359 Query: 307 GKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGA-TAAYGAGDVLKMGI 365 G + GE + LG + QG ++ V G+ GD K + Sbjct: 360 GIPCVPGERKTNAPEYLGTNFFLAAASAAAQGFSQSQTTTVVDGSSVVGAVTGDQGKFIL 419 Query: 366 GGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAE 425 G + +D++ KR + + + G+ V++ + ++ + + S++ Sbjct: 420 GQAIGGGLKESADWFRKRFAENFDAVYVPPGHRVSIHIEKEIEIDYNAQGRKVKYGSKST 479 Query: 426 EDN 428 Sbjct: 480 NSQ 482 >UniRef50_B3CUL3 Putative conjugative transfer protein TraB n=1 Tax=Orientia tsutsugamushi str. Ikeda RepID=B3CUL3_ORITI Length = 368 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 13/169 (7%) Query: 299 IKGH-VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQ-----PAVGLGA- 351 ++G + G++GIKG VV ++ I G A G I + ++ + P + L A Sbjct: 1 MEGWLIGEDGRSGIKGIVVDKSSNIAGMAALNGVFSSIAKFLQSKAIKPDMLPTLNLVAG 60 Query: 352 ---TAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 + GD + G GAS A L+D+ IKRA+ P+I + +G + VVF+ GF Sbjct: 61 GQQQQEFQIGDAFQSGAYAGASNAFDKLADFAIKRADSMSPLIVVASGRVIDVVFKKGFD 120 Query: 409 LKTVEEMALERTQSRAEEDNPESPVPVPPSAESHLNGFNTDQMLKQLGN 457 L E + S +P + + ++ + L N Sbjct: 121 L---REHKKKPHNSTYSPSTGNEDENLPAESSLQVLMIGSNNIENFLSN 166 >UniRef50_C3WQ31 Conjugal transfer protein trbI n=4 Tax=Fusobacterium RepID=C3WQ31_9FUSO Length = 405 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 54/405 (13%), Positives = 116/405 (28%), Gaps = 28/405 (6%) Query: 14 LWLGIVVVGTASAIGGALY-LSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATT 72 + ++ G A+ + AL+ +S + E + + +T T Sbjct: 25 KNIILIACGIAAILIIALFRMSANQKKMMEQQEKIAEEPQESGEIENTNNSSFDIVDYTK 84 Query: 73 EMQVTAAQMQKQYEEIRRELDVL-NKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTAT 131 + + Q+ + + + + +E+ + N + L ++ ++A Sbjct: 85 TSKEDENEEQQNLTYFNENNEKTPEEDTKEPEVNVEEEIKKNEKREAYYETLLSDELSAR 144 Query: 132 GEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPV 191 + S E G PV P ++ + P + Sbjct: 145 SAIIEFGTESKQS--NEKSQGELPVINMPTD-LSKTQMSGISDDINKQPEKKAFLNDEKA 201 Query: 192 PNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQLRITG 249 + Q S I +G +L+ G D S+T Sbjct: 202 RKNYNEDIIH-----QPISKYEIKAGGIIPGVLLTGINSDLPGSMTALVREDVYDTVTGR 256 Query: 250 LVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKN 309 + +P G + ++G R +V + I +G +I++ G Sbjct: 257 YLLIPKGTR--VIGKYSSSVSFGQ---SRILVIWQRII-FPNGSSINLENFEGADMSGYA 310 Query: 310 GIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGA 369 G+ G+V K+ + + ++ K G GA Sbjct: 311 GLVGDVDNHTLKLFQGVILSSILGAAAGIVDDNGNSNNNN----------SWKNNAGRGA 360 Query: 370 SKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 + T+ + R P I I G+ ++ L+ +E Sbjct: 361 GEEIVTIGETIAGRLLSVQPTIKIAPGSRFNIMVNSDLVLEPYKE 405 >UniRef50_B4W818 Bacterial conjugation TrbI-like protein n=2 Tax=Brevundimonas sp. BAL3 RepID=B4W818_9CAUL Length = 387 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 67/383 (17%), Positives = 107/383 (27%), Gaps = 26/383 (6%) Query: 40 GNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQR 99 T V+ +Q ++ E R + R Sbjct: 23 APRPTAVRLRKSVVQVVVIGAAALLSGSLAWAFVVQPELRANARERVEEGRVDEARGTVR 82 Query: 100 GDDQRRIEKLGQDNAALAEQVKALGANPV---TATGEPVPQMPASPPGPEGEPQPGNTPV 156 D + D +Q+ P A P + Sbjct: 83 PADVVTGQPSSYDRLTPGDQLPEPRTRPGESEAADAAPRATDRVRSQDYGYAAAAAPSAP 142 Query: 157 SFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQ---SVPVPNRIQRKVFTRNEGKQGPSLPY 213 A F G G P T S P R V+ + S Sbjct: 143 RGRSVAQEAAGSGLFFGGGPGAQPSGGTTPAGGASSAGPGRDYGAVYNGHALMSPLSPFE 202 Query: 214 IPSGSFAKAMLIEGADANASV-TGNESTVPMQLRITGLVEM-PNSKTYDATGCFVGLEAW 271 + +G+ A L+ G D + S T + I+G + P G G ++ Sbjct: 203 LKAGAIVPAALLTGIDTSRSGPVVATVTQNVFDSISGRHLLLPQGTR--LIGRHDGESSY 260 Query: 272 GDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGF 331 GD RA + + L +GK++ + + V +G G++G V R + AG Sbjct: 261 GD---RRAFLTWERLI-LPNGKSLILTEEPGVDAQGAVGVQGRVDRRLFPLAVATLFAGA 316 Query: 332 VDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVI 391 + +GQ + R G A + +GG I R Q P I Sbjct: 317 ITTLGQ-IARDDDDDGGGLLGDVGDATAIEGARVGGSL-----------IDRELQVRPSI 364 Query: 392 PIGAGNEVTVVFQDGFQLKTVEE 414 + AG V V+ L+ Sbjct: 365 RLRAGAPVRVLITRDLILEPYRP 387 >UniRef50_D0FVW8 Conserved uncharacterized protein n=6 Tax=Enterobacteriaceae RepID=D0FVW8_ERWPY Length = 502 Score = 115 bits (286), Expect = 6e-24, Method: Composition-based stats. Identities = 58/410 (14%), Positives = 107/410 (26%), Gaps = 43/410 (10%) Query: 53 DMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELD-----VLNKQRGDDQRRIE 107 + G+ D A + + Q + R D L Q D +++ Sbjct: 82 RLDGIADDNKKLSDENKALKKTNGNVDRQISQVVDNARAEDTLKRSQLGAQVTDLSTQVD 141 Query: 108 KLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVP 167 +L + A +G N ++ + PV + G P + P+ + Sbjct: 142 RLMEQLRNGASGAAMVGKNSISGSDIPVGMGYDNGSGVNDSTPPADGMQWVEPKDGIPTD 201 Query: 168 PPTAFYPGNGVTPPPQVTYQSV-----PVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKA 222 G+ + S + + P + + Sbjct: 202 ASGRPVSGSNGNNATGFAFASTFDDVSDAGKTVNAATSAVQKTLSEAEKTTDPVYTLPEN 261 Query: 223 MLIEGADANASVTGN-------ESTVPMQLRITGLVEMPNSKTY-DATGCFVGLEAWGD- 273 + G+ A ++ G P ++ + N D G V A GD Sbjct: 262 ATLVGSQAMTALLGRVPVDGKVTDPYPFKVMVGKDNLTANGIELPDVQGAIVSGTATGDW 321 Query: 274 -VSSERAIVRTRNISCLKDGKT-------------------IDMPIKGHVSFR-GKNGIK 312 +S R + + DG + G +S G I Sbjct: 322 TLSCVRGAITSITFV-FTDGTVPSPNGQNGSGANQNGQGGNGNNSSIGWLSDDNGIPCIS 380 Query: 313 GEVVMRNGKIL--GWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGAS 370 G L A A G + + G G + GD + +G S Sbjct: 381 GTRKSNASTYLPTIAALAAAGAAGDALAQNQNTTQTNGYGGVTSSLTGDAGQAVLGKAFS 440 Query: 371 KAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT 420 + D+ R Q I + G +V + + E+ + Sbjct: 441 GGMRETVDWVKARYGQTFDAIYVPPGQKVALHITRQLAIDYEEKGRKVKY 490 >UniRef50_C9M9B5 Conjugal transfer protein TrbI n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M9B5_9BACT Length = 396 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 61/412 (14%), Positives = 110/412 (26%), Gaps = 28/412 (6%) Query: 3 SINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTF 62 + N + KQ L I V + ++ G A P Sbjct: 7 NHNEY-QEKQPLSKRIRYVIIFGIMILFAAVAVAISMSKGHFRAADAPTAVKATTATPPE 65 Query: 63 DDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKA 122 KV + Q A + K+ + V+ Q + N Sbjct: 66 PSKVPSNVEAPAQNKAVEEAKEEPPQVQAPQVIYYQAPAPRVG-------NYRKNAYTVR 118 Query: 123 LGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPP 182 L + +T S G Q ++ G P A + GN P Sbjct: 119 LASAGTASTISTFGSNGQSGNGGGQAQQANPGDLTNLLAGLGGENPAAAGWRGN---APD 175 Query: 183 QVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGA--DANASVTGNES 239 + + Q P PY + +GS +LI G D ++ S Sbjct: 176 PNGWNRKAEFMKQGLPEDYSPYLPQAPVTPYELKAGSVIPCVLISGLNSDLPGNIVAQVS 235 Query: 240 TVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPI 299 ++ +P G + ++G R +V + + +G ++ + Sbjct: 236 EDVYDTATGRILLIPRGSR--VVGAYDSQISYGQ---SRVLVVWQRL-LYPNGVSVKIDN 289 Query: 300 KGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGD 359 G G G+KG V ++ A + + ++ Sbjct: 290 MGATDQSGYTGLKGGVNRHWNSVITSALMVSLLGAGVDIIAPKTKDD----NRDETDPKS 345 Query: 360 VLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKT 411 + + A + IKR P I + G T+ + L Sbjct: 346 KVLENAAASVADAMSQI----IKREVDRQPTIKVKPGYRCTIFVKQDMTLIP 393 >UniRef50_D2U001 Conjugal transfer pilus assembly protein TraB (Fragment) n=1 Tax=Arsenophonus nasoniae RepID=D2U001_9ENTR Length = 230 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 48/270 (17%) Query: 14 LWLGIVVVGTASAIGGALYL----SDVDMSGNGETVAEQEPV---PDMTGVVDTTFDDKV 66 + + G + ++ S V+++ TV P PD+TG + TFD+KV Sbjct: 1 MVFSAIGFGVVAIFTLLWWINRQASGVELTAADSTVQSGNPSAQEPDLTGAITNTFDNKV 60 Query: 67 RQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGAN 126 + + T+ Q++ R+ +DVL K+ +R + + +N+ L V L A Sbjct: 61 QGNVVTDAQLSEK-------ANRQTMDVLLKEIQGIKRDFDAVKNENSQLKANVGQLQAE 113 Query: 127 PVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTY 186 Q E P PG + VS PPQ ++ Sbjct: 114 I---------QHNKKAMEGENSPTPGASQVSHPPQIAI---------------------- 142 Query: 187 QSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLR 246 +P ++ FT + + PS Y+PSG+F+ A+++EGADANASV G V MQ + Sbjct: 143 --LPAKGQLGSTRFTYPKKENMPSGFYVPSGTFSTAIVLEGADANASVKGETKKVAMQFK 200 Query: 247 ITGLVEMPNSKTYD-ATGCFVGLEAWGDVS 275 +TGL +P ++ + T CFV AWG++S Sbjct: 201 LTGLAHLPGNQKLNKLTNCFVTASAWGEIS 230 >UniRef50_Q0AD29 Conjugation TrbI family protein n=1 Tax=Nitrosomonas eutropha C91 RepID=Q0AD29_NITEC Length = 420 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 51/432 (11%), Positives = 112/432 (25%), Gaps = 55/432 (12%) Query: 13 YLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHAT- 71 +V G S + + D + + P P +T + Sbjct: 2 NRLPLFIVGGIVSISVLGIVYTFYDRQNQNMSKVAEGPQPPVTEISLPPVKPGDYSPPEP 61 Query: 72 -----------TEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 TE T + +Q + EE + + ++R++ +L AL+ + Sbjct: 62 LPIEMGSTGIPTEGTNTPSPLQSELEESENRRRTIQR---IEERKLAQLES---ALSSES 115 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTA--------F 172 +A + + + P P + + Sbjct: 116 QAQNFSVRSTRNDTTNIANNDPLAPIRTAINNAAMAEKQVIANNGINENETDDSLYGLNA 175 Query: 173 YPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGP-----------SLPYIPSGSFAK 221 G + + +++++ F N + + + +G+ Sbjct: 176 GIGGLGSNSGIINTSMASDNRQLEKQAFLSNTPEAITYLQHQRRAAVAASREVKAGTIIP 235 Query: 222 AMLIEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERA 279 ++I G D + + +P G + G ERA Sbjct: 236 GVMISGLNSDLPGQIIAQVRENVYDSATGNTLLIPAGAR--LVGIYDSNVTLGQ---ERA 290 Query: 280 IVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGM 339 +V I DG +I + G G +V ++ G Q Sbjct: 291 LVGWERII-YPDGSSISLDRMPGSDVAGYAGFNDQVNNHYWRLFGHGILLSVFTAGIQLS 349 Query: 340 ERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEV 399 + S +Y + ++ +G + ++ R P + + G Sbjct: 350 QPKSTNN------NSYSSQQIVAGALGQQMGQIGMRMAQ----RNMNIQPTLEVRPGYTF 399 Query: 400 TVVFQDGFQLKT 411 V+ L Sbjct: 400 NVMITKDIILPP 411 >UniRef50_C5F2I1 Conjugal transfer protein trbI n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F2I1_9HELI Length = 433 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 63/423 (14%), Positives = 120/423 (28%), Gaps = 44/423 (10%) Query: 7 IVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPD------------M 54 ++ I++ A + +++ V N E A Q + + Sbjct: 37 KNNKRLSKVPIIILFSIAVIVLFSIFYVAVSRKQNLEKQATQTTPKEQIQTTTNPNNTNL 96 Query: 55 TGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNA 114 ++ ++ Q T Q +EI+ + N Q + Sbjct: 97 DTYINDLMQNQKLQANNTNPLPIPNPTQPPIQEIKPQPIQTNNPPVLIQDNAMDEREMKV 156 Query: 115 ALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYP 174 Q+KAL ++ + P + +V P P+ Sbjct: 157 KKDMQLKALLSDTKLNIKTETNNKNQTINF-----NPPSNSNEDINAINVVNPSPSIGLE 211 Query: 175 GNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGA--DAN 231 GN + S + KQ P PY I +G A+LI G D Sbjct: 212 GNTNKDAQGQQFLS------QKNDNGYLKYTKQKPLSPYEIKAGWNIPAILITGVNSDLP 265 Query: 232 ASVTGNESTVPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLK 290 + T + TG + P G + +G R +V + Sbjct: 266 GQILAQV-TQNVYDTSTGKYLLIPQGTK--VVGAYSSNVIYGQ---SRLLVAWNKLI-FP 318 Query: 291 DGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLG 350 +G T+++ S G G + EV +I G A+ + G + S Sbjct: 319 NGDTLNLDSMQGASQDGYTGFEDEVDNHYFRIFGSAFLLSSISA-GIALSDNSDTNSE-- 375 Query: 351 ATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 + + + ++ I++ P + I G + + L+ Sbjct: 376 -KETASDKAIAQAI------QQMGQVASEMIRKNMNISPTLKIRPGYKFNIFVTKDIILE 428 Query: 411 TVE 413 +E Sbjct: 429 PLE 431 >UniRef50_A8PL27 TrbI n=1 Tax=Rickettsiella grylli RepID=A8PL27_9COXI Length = 349 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 45/288 (15%), Positives = 90/288 (31%), Gaps = 20/288 (6%) Query: 125 ANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQV 184 + + +PV Q A P + S AV + NG P + Sbjct: 75 KPVIPQSVKPVNQFSADDLTAMATPIREHQLTSERSVMKSAVNAMMPSHDKNG--PYEKY 132 Query: 185 TYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVP 242 + + + ++ + + SGS +L+ G D + + Sbjct: 133 AFIKLNAESDVKNNTLISSVQGLKSP-FELQSGSIIPGILLSGINSDLPGQIIAQVRSNV 191 Query: 243 MQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGH 302 V +P TG + A+G +R ++ + I +G++ID+ Sbjct: 192 YDSPSGNYVLIPQGSR--LTGIYDAQIAYGQ---QRILIIWQRII-FPNGQSIDLHGMPG 245 Query: 303 VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLK 362 V G G KGE+ K+ G + G + + + A +VL Sbjct: 246 VDRVGYAGFKGEINNHYWKLFGSTLLMSVIGVGGMVLAPPNNNPLA-----QLTAKEVLA 300 Query: 363 MGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 + + A+ ++ ++ P + I G E + + Sbjct: 301 ENLDTNLANASSRIA----EKNLSIQPTLTIPPGYEFNIFVTRDMVFE 344 >UniRef50_D2L4F3 Conjugation TrbI family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L4F3_9DELT Length = 410 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 45/423 (10%), Positives = 104/423 (24%), Gaps = 19/423 (4%) Query: 1 MASINTIV---KRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGV 57 M N + + +++ + T + E + + D + Sbjct: 1 MEDPNQYIETKRMRKWPLYVAIAGITLGIGIMVFAIEHSGKKKAEEAKKPEIQMRDDKPL 60 Query: 58 VDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALA 117 V T + + + ++ +++ D +R+ + AA+ Sbjct: 61 VSTDGGMGLANPPAPAPAPAPVEPKPIVVVKDKDPRDTSRELDDLRRQ-----KVQAAMT 115 Query: 118 EQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNG 177 L V+ + +P + + A G Sbjct: 116 ALSSPLVIRKVSEKEDKKSDGKQLVEKTMDGSRPDSRERPSDRLDQLDRLERLAGATKGG 175 Query: 178 VTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPS-LPYIPSGSFAKAMLIEGADANASVTG 236 P + + + +G+ A++I G +++ Sbjct: 176 EYNPAADRDKEAFFDRAKVSDRQWISPNTRMAGHRFEAKTGTVIPALMIGGINSDLPGQI 235 Query: 237 NESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTID 296 + + G + +G R +V I DG I Sbjct: 236 IAQVAQNVYDTADGRYLLIPQGARLYGVYDSRIIYGQ---SRVLVAWNRII-FPDGSAIT 291 Query: 297 MPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYG 356 + G +G + +V +I G A V G + P + + Sbjct: 292 LESMPGADSAGYSGFEDQVNNHYFRIFGGALLMSLVSGGASWAVDSVTP-----SDNSNN 346 Query: 357 AGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK-TVEEM 415 L+ + + + + + P + I G V+ + E Sbjct: 347 GSPTLQQQMSSSLATQLGQTTSQLLSKNMSIKPTLEIRPGYRFNVIVTKDLVFRAPYREQ 406 Query: 416 ALE 418 E Sbjct: 407 RHE 409 >UniRef50_B9K3A4 Conjugal transfer protein n=1 Tax=Agrobacterium vitis S4 RepID=B9K3A4_AGRVS Length = 445 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 59/390 (15%), Positives = 114/390 (29%), Gaps = 27/390 (6%) Query: 34 SDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELD 93 + + + E ++ V+ F RQ TT+ T + + + + Sbjct: 80 VNEPQRQDPLIITPGETPMELPEGVNP-FQPGSRQRPTTQQAETPLEPEADW------RE 132 Query: 94 VLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGN 153 L ++ + R E+ Q AA+ Q A + G+ G +G+ Q Sbjct: 133 RLKREHEEALLR-EQNRQRLAAMQAQANARNSPMAVDIGK---VTQQQGIGQQGQGQANG 188 Query: 154 TPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY 213 ++ A G+ P + + I + N+ S Sbjct: 189 LTSPNGTADLLSAAMRAAGAGPGGMADPNNQQGKISFLNKDIADAGYLPNQIVPQQSPFE 248 Query: 214 IPSGSFAKAMLIEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAW 271 + GS A LI G D +T + +P G + ++ Sbjct: 249 LKRGSVIPATLITGINSDLPGRITAQVRQHVYDSATGHRLLIPQGTK--LFGRYDSEVSY 306 Query: 272 GDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWG-AG 330 G RA+V +I +G T+ + V +G G K +V ++ G A A Sbjct: 307 GQ---SRALVVWTDII-FPNGSTLQIGGMAGVDTQGYGGFKDKVKNHFWRVWGSAILVAA 362 Query: 331 FVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPV 390 G+ + + D + ++D I + P Sbjct: 363 IGTGVDMAL---PESNSNAFGVTQNDPTDAARRNFAE----TFGRVADRTIDKNMNIQPT 415 Query: 391 IPIGAGNEVTVVFQDGFQLKTVEEMALERT 420 + I G + ++ L + Sbjct: 416 LEIRPGYQFNILVDQDIVLPGAYQTGYVER 445 >UniRef50_P54917 Conjugal transfer protein trbI n=21 Tax=Rhizobiales RepID=TRBI_RHIRD Length = 433 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 57/404 (14%), Positives = 105/404 (25%), Gaps = 33/404 (8%) Query: 23 TASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQ 82 G G + EP + D + + ++ Sbjct: 38 LGIIFYGLASRGLYFGRDKGPESSSGEPASTFADQIKRGVTDGIIGEPQQQTTFQPTPVE 97 Query: 83 -KQYEE-------------IRRELDVLNKQRGDDQRRIEK--LGQDNAALAEQVKALGAN 126 KQ +E +EL+ R +R ++ L + +++A A Sbjct: 98 TKQVDEKASNPFTPTPEQRRGQELEPEAVWRARLEREQQEQYLRERQRQRMARLQANDAA 157 Query: 127 PVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTY 186 ++ A + +T +S S G P Sbjct: 158 YDAPLAIDRGKLEARTATDDTSAANTSTAISPTAGASDLYAAALRAGLGGQNIDPNGQKS 217 Query: 187 QSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQ 244 + ++ + N SL + GS A LI G D +T S Sbjct: 218 KEDFFNTDLKDLGYLPNRVVPQQSLYELKRGSVIPATLITGINSDLPGRITAQVSQNVYD 277 Query: 245 LRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVS 304 + +P G + ++G R +V +I +G T+ + Sbjct: 278 SATGHRLLIPQGTK--LFGRYDSKVSFGQ---SRVLVVWSDII-FPNGSTLQIVGMAGTD 331 Query: 305 FRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMG 364 G G K +V K G A + S + D Sbjct: 332 AEGYGGFKDKVNNHYFKTFGSAVMIALIGTGIDMSVPQS---------STLATQDTASDA 382 Query: 365 IGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 ++ ++D I+R P + I G + V+ Sbjct: 383 ARRNFAETFGRVADRTIQRNMDVQPTLEIRPGYKFNVLVDQDII 426 >UniRef50_B4S3J0 Conjugation TrbI family protein n=2 Tax=Prosthecochloris aestuarii DSM 271 RepID=B4S3J0_PROA2 Length = 428 Score = 108 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 63/209 (30%), Gaps = 18/209 (8%) Query: 208 GPSLPYIPSGSFAKAMLIEGAD--ANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCF 265 S I +GS L+ G D + G + +P + Sbjct: 235 PSSPFEIKAGSIIPVSLVTGIDSDLPGEIIGQVREHVYDSVTGRYLLIPQGSR--LLARY 292 Query: 266 VGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGW 325 + ++G RA+V + DG +ID+ + G G V +++G Sbjct: 293 DSMVSYGQ---RRALVCWNRLIR-PDGSSIDLGCAPGIGLDGYAGFGDRVDNHFDRLIGG 348 Query: 326 AWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAE 385 + + + AG + G ++A Q ++ ++ Sbjct: 349 VLLSSVLS------VGTTMSQGEWDGHDDRTAGQLFAANAGEEINRAGQQIT----RKNL 398 Query: 386 QYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 P I + G V V+ L V E Sbjct: 399 GIQPTIKVRPGYSVNVLVNRDLTLGPVGE 427 >UniRef50_D2LK45 Conjugation TrbI family protein n=3 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LK45_RHOVA Length = 433 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 81/308 (26%), Gaps = 23/308 (7%) Query: 111 QDNAALAEQVKALGANPVTATGEPVPQMPASP--PGPEGEPQPGNTPVSFPPQGSVAVPP 168 + L E + L + A E +P E P P + F + + Sbjct: 120 KRLEHLREAREKLALTALGAGSEIQANLPRRTAFSTSEAAPAPLSASEQFTRLAADRLSQ 179 Query: 169 --PTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLI 225 A + + + + P + ++ P PY + +G+ A++I Sbjct: 180 LGGDAERDRDLNRQRDKRAFLADQDPKTADQNTLKAR--REAPRSPYEVRAGTVIPAIMI 237 Query: 226 EGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRT 283 G D + S + +P G + G ER +V Sbjct: 238 GGVNSDLPGQLLAQVSENVYDTATGRFIVIPQGSK--LVGTYDSGITTGQ---ERVLVAW 292 Query: 284 RNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERAS 343 I D ++D+ G G +V KI A Q + Sbjct: 293 TRII-YPDASSLDLGRMPGADEGGYAGFNDQVNNHVWKIWSNAILLSAFSAGIQLSQGNG 351 Query: 344 QPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVF 403 G A I + L +R Q P + + G V Sbjct: 352 NNQTSGGLNAT--------QTIAASTGQQLGQLGMEMARRNLQIQPTLEVRPGYRFVVQV 403 Query: 404 QDGFQLKT 411 L+ Sbjct: 404 TKDLILRP 411 >UniRef50_A1U889 Putative uncharacterized protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U889_MARAV Length = 494 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 48/399 (12%), Positives = 110/399 (27%), Gaps = 37/399 (9%) Query: 60 TTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGD-----------DQRRIEK 108 T VR+ + ++Q +++ + + + + + LNK+ + +R++E Sbjct: 88 TNETRAVREDSL-KLQEENERLKARIDSLLKMEESLNKRIANRFENAERDAAVQKRQLEN 146 Query: 109 LGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPP 168 L Q+++ + + G P S P V Sbjct: 147 TQDRTRGLIAQLESRLEELQGSNEKSQTTANGYDINSAGIPTGLGYDDSGSPVDFDQVIW 206 Query: 169 PTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY---IPSGSFAKAMLI 225 P +++ + V + +Q + + + + Sbjct: 207 TNPLEAEVDPRDPSKISLPDFDLGASSVSSVTGLDMPQQKQKSKEERLVKAYTIPDNATL 266 Query: 226 EGADANASVTGN-------ESTVPMQLRITGLVEMPNSKTYD-ATGCFVGLEAWGD--VS 275 G+ + ++ G P +L + N TG + A GD +S Sbjct: 267 LGSVSMTALLGRIPIGGQVVDPYPFKLIVGPENLSSNGIKIPGLTGIKMSGIAKGDWTLS 326 Query: 276 SERAIVRTRNISCLKDGKTIDMPIKG---------HVSFRGKNGIKGEVVMRNGKILGWA 326 + + + +DG + P G G + G+ + L Sbjct: 327 CVSGQIDSMTFT-FQDGTIVSYPEPGEKSIEAIAWFSDKYGIPCVTGQRITNAPSYLAQK 385 Query: 327 WGAGFVDGI--GQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRA 384 + + LG GD + + S + ++D+ R Sbjct: 386 VLLTGASSYSKAKADSEFTTSTNALGGQTKGLTGDPMVVAKNDAISSSLDEVTDWLDARQ 445 Query: 385 EQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSR 423 I + G E+ + + + E + Sbjct: 446 SNSFDAIYVEPGTELVIHISEQLAIDYDPEGRKVNHYAN 484 >UniRef50_A1TQT7 Putative uncharacterized protein n=2 Tax=Comamonadaceae RepID=A1TQT7_ACIAC Length = 484 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 66/484 (13%), Positives = 127/484 (26%), Gaps = 69/484 (14%) Query: 11 KQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHA 70 K ++ ++ + + +G ++ + A P + Sbjct: 4 KSNRFIPVLAIAAIAIVGTIFMMNRNPSPASEPMKAVPLPKTAGADEDTPAETLATVVAS 63 Query: 71 TTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKA----LGAN 126 E++ A ++ ++ EE+RR+L + A +A + Sbjct: 64 NRELRQWAERVLRENEELRRQLKLGGIPSQAVSAEPTAATGTPDQPAPPRQAKAGGASNS 123 Query: 127 PVTATGEPVPQMPASPPGPEGEPQPG---------NTPVSFPPQGSVAVPPPTAFYPGNG 177 PV + P + G VPP Sbjct: 124 PVDVIANAWGNATDTLGSLGRHPAAPVDGAVAQDMPADGAAGAVGYKVVPPMGYVAQTQS 183 Query: 178 VTPPPQVTYQSVPVPNRIQ-----------------RKVFTRNEGKQGPSLPYIPSGSFA 220 Y P R +E + +P S Sbjct: 184 NQGMTTTRYVRSPGSATAAAAAAAGAGGSTGTGSATRAAQAASEKPEAEPYFTLPENS-- 241 Query: 221 KAMLIEGADANASVTGN-------ESTVPMQLRITGLVEMPNSKTY--DATGCFVGLEAW 271 + G A S+ G + + + N D G V A Sbjct: 242 ---TLTGVTAMTSLIGRVPVNGRVTDPMQFKAIVGRENLAANGWELPEDLAGMVVTGVAI 298 Query: 272 GD--VSSERAIVRTRNISCLKDGKTIDMPIK------------------GHV-SFRGKNG 310 GD +S VR+ DG + + G + G Sbjct: 299 GDMALSCTEGKVRSMTFV-FNDGTIRTISARRSGSSTNGGIGSGNTSDLGFISDLHGNPC 357 Query: 311 IKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLG-ATAAYGAGDVLKMGIGGGA 369 I+G+ V L GA + + + +A + G +T++ G+ +G Sbjct: 358 IQGKFVTNAPAYLTDIVGAKGLGVAAEALAQAQTTTLNRGDSTSSAVTGNAGSFALGRMG 417 Query: 370 SKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAEEDNP 429 S AA L+ + +R + + AG + +V ++ + + R + N Sbjct: 418 SGAADELTRWLTERLKSSFDAVVTPAGQQ--LVVHLDTEVAIDKPANARKILHRTQSSNV 475 Query: 430 ESPV 433 S Sbjct: 476 LSGA 479 >UniRef50_Q5P8M1 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P8M1_AZOSE Length = 483 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 69/459 (15%), Positives = 135/459 (29%), Gaps = 54/459 (11%) Query: 16 LGIVVVGTASAIGGALYLSDVDMSGNGETVAEQE-PVPDMTGVVDTTFDDKVRQHATTEM 74 L V+ A + G + + G E P+P D + + Sbjct: 8 LVPVLTAVALTVTGYILYKQSEHPGVEPGAPMTEVPLPPTQKGADADTPQETLKTVVAGY 67 Query: 75 QVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDN-AALAEQVKALGANPVTATGE 133 ++ +E RR L+ +++ + R E+L ++ + +++AL N A Sbjct: 68 SELNDRVAALVDENRRLLEENTRKQRTEDRIREQLRKELRTEMTAEIEAL--NRRQAPTA 125 Query: 134 PVPQMPASPPGPEGEPQP---GNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVT----- 185 + S GP P+ + + G+VA P G + Sbjct: 126 DTGGLLESALGPGNLPRGFGFDSGSKAGNTGGTVAAAPTRVLPLGYEMGKGADGKEGVVR 185 Query: 186 --YQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGN------ 237 + +R + + IP + + + G ++ G Sbjct: 186 KLALADTTATAARRTRTAPSSQARKTVPAAIPFFTIPENATLTGVANMTAIVGRVPVDGK 245 Query: 238 -ESTVPMQLRITGLVEMPNSK--TYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKT 294 + +L + N + TG V A GD++ A ++++ + + + Sbjct: 246 VTDPMQFKLLLGPENLAANGHYLPRNLTGVVVSGIAIGDMTLSCAEGLIQSLTFVFNDGS 305 Query: 295 IDM----------------------------PIKGHVSF-RGKNGIKGEVVMRNGKILGW 325 I+ P G +S G I G V L Sbjct: 306 IETVSRRNNGTTPLFGATDSSSGHMPSLAAAPKLGWISDRYGNPCIPGRFVTNAPAHLTD 365 Query: 326 AWG--AGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKR 383 A G + + G + +Q G T + GD +G A ++ + ++R Sbjct: 366 AIGLRSLAIAGQAAAAAQTTQTGNVFGTTTSRVTGDTGTYILGQMMGGATDEVTSWIMRR 425 Query: 384 AEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQS 422 + + AG EV V + E Sbjct: 426 LTNSFDAVVVPAGGEVVVHIDTEIPIDKSPEARRLDYGR 464 >UniRef50_A6GUS3 Conjugation TrbI family protein n=2 Tax=Bacteria RepID=A6GUS3_9BURK Length = 467 Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 47/382 (12%), Positives = 96/382 (25%), Gaps = 15/382 (3%) Query: 34 SDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELD 93 S S V+ +P P+++ A + L Sbjct: 94 SSWYASKGNNLVSLLQPEPELSTSFSQPSITSGVPDLGGAASNALATASTSGKTSVPNLT 153 Query: 94 VLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGN 153 + Q+ +L ++ E+ + P P + Sbjct: 154 ASAATQPLAQKSQAELMEEQRREQEKQRRAQELDQAKKANLAASGFGGAQQAGAVPMPVS 213 Query: 154 TPVSFPPQGSVA-VPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLP 212 + + + P N Q Q + + K+ P P Sbjct: 214 SNNFQQSAMQLPGLTPGMQNNALNNDDQNRQADKQQFLKDQKTPLDTDYSSSVKKAPRSP 273 Query: 213 Y-IPSGSFAKAMLIEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLE 269 Y + +G+ A++I G D V + + +P G + Sbjct: 274 YEVKAGAVIPAVMIGGINSDLPGQVIAQVKENVYDSKTGQHLLIPLGSR--LIGLYDSSV 331 Query: 270 AWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGA 329 +G ER ++ + +G + ++ G G EV K+ G A Sbjct: 332 TYGQ---ERVLLAWNRVI-FPNGDSFNLQGMPGADKAGYAGFFDEVDNHYFKVFGNAILM 387 Query: 330 GFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHP 389 + Q + + + +G + + ++ P Sbjct: 388 SIISAGVQISQPNNGGNGNNTNQGPSVSQT-----VGAALGQQIGQTALTITQKNLNIQP 442 Query: 390 VIPIGAGNEVTVVFQDGFQLKT 411 + I G E V+ L Sbjct: 443 TLKIRPGYEFNVMVTADMILPP 464 >UniRef50_Q210W5 Conjugation TrbI-like protein n=28 Tax=Alphaproteobacteria RepID=Q210W5_RHOPB Length = 411 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 44/300 (14%), Positives = 89/300 (29%), Gaps = 26/300 (8%) Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 + G A + + P P P + +P P A Sbjct: 136 QRRGQEIEAARLSRLFAPTNTRELPPIVPTPASATPPEASAVLNPLPQPPADSTFAQNGQ 195 Query: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNE 238 ++ + + + R+ + + S + +G+ LI G D +T Sbjct: 196 DRKLAF----INASVDRRTTSPDRLAAPASPYVVQAGTVIPGALITGIRSDLPGLITAQV 251 Query: 239 STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMP 298 S + +P G + A+G R ++ + + +GK+I + Sbjct: 252 SENVYDSPSGKFLLIPQGAR--LIGQYDSQVAFGQ---SRVLLVWTRLI-MPNGKSIVLE 305 Query: 299 IKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAG 358 + G G++ EV G + A + + + G+ Sbjct: 306 RQPGADTAGYAGLEDEVDNHWGALFKAAMLSTLLSVGSE--------------VGTSGSE 351 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 D + I G S++ + + R P + I G V V+ L + A + Sbjct: 352 DDVVQAIRRGGSQSFNQVGQRVVSRNLDIQPTLTIRPGFPVRVIVNRDLVLAPYNQEAAK 411 >UniRef50_D0L1C0 Conjugation TrbI family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1C0_HALNC Length = 439 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 60/416 (14%), Positives = 115/416 (27%), Gaps = 31/416 (7%) Query: 8 VKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVR 67 KR L V + I D + + E D+ ++ V Sbjct: 32 SKRAALLLAIPVALAGGVVIYNIFSRGDEPTLASADKPKTVESAMDVAESINQKAARLVA 91 Query: 68 QH-ATTEMQVTAAQMQKQYEEIRRELDVLN------KQRGDDQRRIEKLGQDNAALAEQV 120 T Q + + + + + + Q LA++ Sbjct: 92 PSLPTASDQHSGSAASDKPNAKPTTNQATAPDLSHATPSNEQPKPLTPAEQAAQRLADER 151 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFP------PQGSVAVPPPTAFYP 174 + A + A+ P EP + GS P Sbjct: 152 LQRLQQAMDAATKTKSFRDANGGAPMDEPSINRGSLGQVSGLGLAASGSGFNPSSLLGNA 211 Query: 175 GNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGA--DAN 231 T Q ++ + + T + P+ I SG+ A+L+ G D Sbjct: 212 AGQGTQGDQKDKKAFLQAAKAEIATPTLAASVKPAQSPFEINSGTVIPAVLVTGLNSDLP 271 Query: 232 ASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD 291 + G S + +P G + ++G R +V + + + Sbjct: 272 GEIIGQVSENVFDTATGNHLLIPKG--AKLFGQYDSQVSYGQ---NRLLVAWQRVI-FPN 325 Query: 292 GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGA 351 G T+++ G V G G +G+V ++ A Q + + G+ Sbjct: 326 GSTLEIGGMGGVDKTGSAGFEGQVDNHYWRLFTGALMTSIFSAGIQLSQPQTNNNNGVQG 385 Query: 352 TAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGF 407 T G + +G + ++S + P I I G +V+ Sbjct: 386 T-----GQTIGAAVGQQIGQLGVSISQ----KNLAIQPTIVIRQGYRFSVMVDKDV 432 >UniRef50_A9L6S0 Conjugation TrbI family protein n=1 Tax=Shewanella baltica OS195 RepID=A9L6S0_SHEB9 Length = 431 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 92/331 (27%), Gaps = 25/331 (7%) Query: 87 EIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPE 146 + +L + QR D R Q AAL + + N Q + Sbjct: 122 SLEEQLRIQQMQRLADFRT----QQHLAALVADTE-IKINDSITQSMTKEQTSSMSENDS 176 Query: 147 GEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGK 206 Q +A P Q + + + Sbjct: 177 LIMQAKKKMTELQQNLGGNPFISSAMAEPMMQQADPNGQAQKAAFLGQQRSDDYLGYTRT 236 Query: 207 QGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGC 264 + S + G+ A LI G D ++T S + +P G Sbjct: 237 EPLSPYELSVGTLIPATLITGMNSDIPGAITAQVSQDVYDSATGKHLLIPQG--AKLYGV 294 Query: 265 FVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILG 324 + ++G R + I+ DG +++ G G +G EV K G Sbjct: 295 YDSNVSYGQT---RGVSAWTRIN-FPDGTRLNLAGMGGTDTEGYSGFADEVDNHYWKTFG 350 Query: 325 WAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRA 384 A+ G + G+ Q G + GD K I G ++ I++ Sbjct: 351 NAFLLGMISGVAQA-----------GISEDSKNGDT-KSAIADGVTQQFAQTGSTLIQKN 398 Query: 385 EQYHPVIPIGAGNEVTVVFQDGFQLKTVEEM 415 P I I G + ++ L + Sbjct: 399 LDVQPTIKIRPGYKFNIMVNKDVMLSPYNKR 429 >UniRef50_A8PLK4 Mating pair formation protein TrbI n=1 Tax=Rickettsiella grylli RepID=A8PLK4_9COXI Length = 385 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 49/400 (12%), Positives = 105/400 (26%), Gaps = 43/400 (10%) Query: 14 LWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTE 73 L + + G I + + E ++ Sbjct: 22 RRLLLSIAGGLLLIVILFLYFLNHYAPHPIKKVSGE-------------------NSQGN 62 Query: 74 MQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGE 133 + ++K E + L V +K + + + A+ A + A+ Sbjct: 63 SDSAVSLIEKIQGETHKPLLVDSKAKHPIKPKNSSDADSLASKASPKNLSQNDFKEASNA 122 Query: 134 PVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPN 193 + + E +P + Q P + ++ + + Sbjct: 123 SISVYHNNTQYAESQPSLSYPNLPSALQNINLDSPHSPDAYTQKNLQSEKIAF----LNK 178 Query: 194 RIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGA--DANASVTGNESTVPMQLRITGL 250 + T Q P Y + +G+ A L+ G + + Sbjct: 179 NDSLEKNTIQSTLQHPLSQYQLNAGTIIPANLVTGIYSNLPGHIMAKVRHDVYDTATGNY 238 Query: 251 VEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNG 310 + +P T G + A+G R ++ + D + D+ V G G Sbjct: 239 LLIPQGTT--LIGNYDSQVAYGQ---SRVLIVWSRLI-FPDTSSFDLQRMPGVDLAGMAG 292 Query: 311 IKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGAS 370 + +V ++ A GQ + S + ++ IG Sbjct: 293 LHDQVDNHYFRLFSSALMFSVFGAAGQLSQPQSNNN-------PLSSQQIIYGAIGQQIG 345 Query: 371 KAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 + A L + P + I G + V+ L+ Sbjct: 346 QTATQLVAKNM----NIQPTLKIRPGTDFNVLLTRDLVLQ 381 >UniRef50_A5IH56 Conjugal transfer protein trbI n=3 Tax=Legionella RepID=A5IH56_LEGPC Length = 416 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 58/408 (14%), Positives = 122/408 (29%), Gaps = 26/408 (6%) Query: 8 VKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVR 67 VKR + L IV+ + ++++ + ++ + + + Sbjct: 22 VKRVNNVPLIIVIGILTVFVVLIAFVANKRANAQNQSPEIVKIKSQKKNTMSLAY----- 76 Query: 68 QHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANP 127 +V Q + I++E + ++ D ++ E L Q+ +++ + Sbjct: 77 -EVVGNHKVPVVAPQTETITIKQEASLPILEQQDLPQKQETLDQNVT--DAEIERIRQEK 133 Query: 128 VTATGEPV-PQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTY 186 E V + + + V P TAF + Sbjct: 134 TQEFEEAVKAKTSIMVDNVRLNNRASVRTSMSGNDVTFNVDPSTAFKEQLMLVQGMHNKP 193 Query: 187 QSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGA--DANASVTGNESTVPM 243 + + N + P+ Y + +G +++ G + + G S Sbjct: 194 MPQTLGGEENEMRWHLNSRLESPNSRYELRAGGVIPGVMVSGISSELPGQIIGQVSQNVY 253 Query: 244 QLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHV 303 + +P G + ++G S +V + + DGK +D+ Sbjct: 254 DTATGKYLLIPQGTK--VFGIYSSDVSFGQNS---VLVAWQRLV-FPDGKALDIGSMPGA 307 Query: 304 SFRGKNGIKGEVVMRNGKILGWAWG-AGFVDGIGQGMERASQPAVGLGATAAYGAGDVLK 362 G G + +V +I G A +G V GI G + AG VL Sbjct: 308 DSAGFAGFRDQVDHHYARIYGSALLMSGIVAGITYSQNSNQPNQFGY---SQPTAGSVLS 364 Query: 363 MGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 +G + L + + P I + G ++ K Sbjct: 365 QALGQQLGEVTSQL----VSKNLNVSPTINVRPGYRFNIIVVKDLTFK 408 >UniRef50_A1W7X8 Putative uncharacterized protein n=33 Tax=Proteobacteria RepID=A1W7X8_ACISJ Length = 477 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 61/466 (13%), Positives = 128/466 (27%), Gaps = 54/466 (11%) Query: 13 YLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATT 72 WL I + +G L+ + A +M + + Sbjct: 7 LKWLLIPMALLLVFVGIKLFSGAPGGQPAPKGAASTLTPEEMKALGIAGDTPRDTVATLV 66 Query: 73 EMQVTAA-QMQKQYEEIRR---ELDVLNKQRGDDQRRIE-KLGQDNAALAEQVKALGANP 127 ++Q + ++ E + L + +RI+ L + + L ++ + ++ Sbjct: 67 AQVKQLRTELQSALGDNKQHKAENERLRARESAIDQRIQSALEGERSRLEQERNQVASDR 126 Query: 128 VTATGEPVP-----------QMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGN 176 G P+ P G + + + V P A Sbjct: 127 QQTQGLLQDLQRQLDGLSGKGGPSDLPVGLGLEEGDGQRFNRGVASTQWVEPDDAKVDAK 186 Query: 177 GVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPS-GSFAKAMLIEGADANASVT 235 + P P + V + + + + + G+ A ++ Sbjct: 187 NSSKEPSFPLSFGPAQKSLSAAVESVADVGSRAVGASTKAVYTVPSNSTLMGSIAMTALI 246 Query: 236 GN-------ESTVPMQLRITGLVEMPNSKTY-DATGCFVGLEAWGD--VSSERAIVRTRN 285 G P ++ I N D G V A GD +S R +R+ Sbjct: 247 GRVPIDGTVNDPYPFKVLIGPDNLTANGIDIPDVAGAVVSGTASGDWTLSCVRGQIRSVT 306 Query: 286 ISCLKDGKTIDMPIK----------------------GHVSF-RGKNGIKGEVVMRNGKI 322 +DG +P G +S G + GE + Sbjct: 307 FV-FQDGTIRTVPEDSSKGGSSGGNSGHNGASIQGGLGWISDPYGIPCVSGERRSNAQQY 365 Query: 323 LGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMG---IGGGASKAAQTLSDY 379 LG + ++ +V + A + G V G +G + + ++D+ Sbjct: 366 LGSQALITAAGAGAASLIKSDNGSVAVVANSNGSLGTVGISGNEAMGRILAGGVRDMADW 425 Query: 380 YIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAE 425 K Q + + G +V V + + + ++ Sbjct: 426 VNKLYGQAFAAVYVQPGAKVAVHLEQPLDIDYDAKGRRVHHRTGEA 471 >UniRef50_A3VPP6 Conjugal transfer protein trbI n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VPP6_9PROT Length = 404 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 68/243 (27%), Gaps = 23/243 (9%) Query: 175 GNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGA--DAN 231 G P P + Q P PY + +G+ A L+ G D Sbjct: 182 GFADAPDPNFQQRKEGFLGAEADDGIYNPHRLQAPISPYQVMAGTIIPASLVTGLNSDLP 241 Query: 232 ASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD 291 V + + +P G + + A+G RA+V I + D Sbjct: 242 GQVIAQVTENVYDTPTGAHLLIPQGSR--LIGRYDSVIAYGQ---SRALVVWSRII-MPD 295 Query: 292 GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGA 351 G +I + V G G++ V ++ A + + + Sbjct: 296 GSSIVIDNLPGVDMAGYAGLEDRVDYHTWRLFQAAILSSVLSVSAEL------------- 342 Query: 352 TAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKT 411 D + + G + I + P I + G + V+ LK Sbjct: 343 -GRDSNDDEILEALRDGGQRTINQAGLQIITKQLNVQPTITVRPGYRLRVIVNKDIVLKP 401 Query: 412 VEE 414 + Sbjct: 402 YGD 404 >UniRef50_C6XNV6 Conjugation TrbI family protein n=4 Tax=Alphaproteobacteria RepID=C6XNV6_HIRBI Length = 415 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 54/424 (12%), Positives = 115/424 (27%), Gaps = 40/424 (9%) Query: 4 INTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFD 63 +N K + + V+ + IG + +++ + ++ +T Sbjct: 14 LNIRSKPRPVTRINRKVLIVGAGIGVMGLFAAANIALAPPKAVDPSQRRELYNTTNTRKP 73 Query: 64 DKVRQHATT-------------EMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLG 110 D + + T ++ T ++ L + + Sbjct: 74 DGLARLPKTYNDVPKLGPPLNGDLGATILAAERDLGIEPTYLTNNPHSFKPNPLDEAERA 133 Query: 111 QDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPT 170 A A ++ P + Q S + + P T Sbjct: 134 ARMRQAKLAEAASQAPVFFQLQSRSGVTSSATPALSAQHQAMLETRSELMALAKSSMPQT 193 Query: 171 AFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA-- 228 G Q + + ++ + + S I +GS A L+ G Sbjct: 194 GSGFGGQHDSNLQDKKLAF-ANEHTRSDIYNPHRLETPASPYQIMAGSLIPASLVTGINS 252 Query: 229 DANASVTGNESTVPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVRTRNIS 287 D ++ T P+ +G + P G + ++G RA+V I Sbjct: 253 DLPGAIIAQV-TQPVYDTASGHHILIPQGAR--LLGRYQSNVSFGQ---NRALVTWNRI- 305 Query: 288 CLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAV 347 DG++I + G +G G+ + ++ A A + Sbjct: 306 LFPDGRSIIISAPG-ADSQGFAGLSDKTDHHWDRVFAAAGLATLL--------------- 349 Query: 348 GLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGF 407 +G+ + I G S + + P I + G + V+ Sbjct: 350 NIGSELGSNDDSDIVRAIRNGTSDTINQAGQAIVDKQLGIQPTIKVRPGWPLRVIVTRDL 409 Query: 408 QLKT 411 L+ Sbjct: 410 ILEP 413 >UniRef50_C6N225 Conjugal transfer protein trbI n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N225_9GAMM Length = 417 Score = 99 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 54/410 (13%), Positives = 110/410 (26%), Gaps = 33/410 (8%) Query: 8 VKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGET----VAEQEPVPDMT---GVVDT 60 VKR L L I + + ++++ + +T + +M +V Sbjct: 22 VKRVNNLPLMIAIGVLTVFVVLIVFVAHKRANAQNQTPEAIKVTGQKKNNMNLANEIVGN 81 Query: 61 TFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQV 120 + + ++ ++ + ++ Q D +E++ Q+ E+ Sbjct: 82 HKTGVMPASNEKLIINHEPVLELPVDQNSPQKQEMDSQNVSDT-ELERIRQEKTQAFEEA 140 Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 + + S + GS V Sbjct: 141 VKAKTSIMV-----DNPRLNSRESTNTHRINAASTFDVDVGGSF-------KEELQLVQE 188 Query: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGADANASVTGNES 239 + + N + P+ Y + +GS ++I G + Sbjct: 189 RQNTRPMPQTLGGEENEMRWHLNSRLENPNSRYELRAGSVIPGVMISGISSELPGQIIGQ 248 Query: 240 TVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPI 299 + + G + +G S +V + + DGK +D+ Sbjct: 249 VSQSVYDTPTGKYLLIPQGTKLIGIYSSDVNFGQNS---VLVAWQRLV-FPDGKALDIGS 304 Query: 300 KGHVSFRGKNGIKGEVVMRNGKILGWAWG-AGFVDGIGQGMERASQPAVGLGATAAYGAG 358 G G + +V +I G A +G V GI G AG Sbjct: 305 MPGADSAGYAGFRDKVNHHYIQIYGSALLMSGIVGGISYSQNINQPNQYGYTQPT---AG 361 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 VL +G + L + + P I I G ++ Sbjct: 362 SVLSQALGQQLGEVTSQL----VAKNLNVSPTINIRPGYRFNIIVVKDLT 407 >UniRef50_C5SQN8 Conjugation TrbI family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SQN8_9CAUL Length = 396 Score = 99.6 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 59/407 (14%), Positives = 115/407 (28%), Gaps = 41/407 (10%) Query: 10 RKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQH 69 R+ + V+V +A+ + +L+ G +P TF+ Sbjct: 22 RRIIRFKRHVLVASAAVVCASLFGVTWLALGASAPKVVAQP---------ETFNPDKLAD 72 Query: 70 ATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVT 129 +Q+ + Y++I + L + + L A Sbjct: 73 TQQAQPDKLSQLPQAYDQIPEGVPQLGPPLPGYRGE--------STLQVAPVPAQAGRDG 124 Query: 130 ATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSV 189 G PA+ G P + V+ P P + + Sbjct: 125 GVGSGSVSAPATVSGVFFTVAPRLSTVADKAPMPDIRPLDAMRLPISFGPAEGVPLAKPD 184 Query: 190 PVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQLRI 247 V + ++ +E + S + +G+ A L+ G D V S P+ + Sbjct: 185 FVDRKGYGGIYNSHEMQTPVSPYQVMAGTVLSASLVTGLKSDLPGVVIAQVS-QPVFDTV 243 Query: 248 TGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFR 306 + + P G + A+G RA+V + + L DG ++++ Sbjct: 244 SAQHLLIPAGTR--LLGQYDDQVAFGQ---SRALVVWKRLI-LPDGSSLEIDNLPATDSE 297 Query: 307 GKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIG 366 G G+ +V +L + + G G L Sbjct: 298 GDAGLADKVDYHTWSLLKGVGLSTLLG---------LTSHSGQG-----DDDSDLVRAFR 343 Query: 367 GGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 A ++++ P I + G V V+ LK Sbjct: 344 EATRDTANQAGQRIVEKSLNIRPSITVRPGWPVRVIVHKDLILKPYG 390 >UniRef50_B1ZGL7 Conjugation TrbI family protein n=39 Tax=Bacteria RepID=B1ZGL7_METPB Length = 421 Score = 99.2 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 37/314 (11%), Positives = 81/314 (25%), Gaps = 32/314 (10%) Query: 112 DNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTA 171 + V G G + + P + P+A Sbjct: 127 NAQNGGPSVSTPGGTAPAPVGPSPEEQRRTQELEAARTARLFASTETRPPNTATAAQPSA 186 Query: 172 FYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY----------IPSGSFAK 221 + Q + ++ F + P + +G+ Sbjct: 187 TATPATDLASLGLAPQPATPSAQDRQLAFLNQAPDKRTVSPDRVVAPASANVLQAGAVIS 246 Query: 222 AMLIEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERA 279 A LI G D +T + ++ +P G + +G R Sbjct: 247 AALITGIRSDLPGQITAQVTENVYDSPTGKILLVPQGTR--VIGQYDSGVGFGQ---RRV 301 Query: 280 IVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGM 339 ++ + +G++I + + G G++ V G++ A + + + Sbjct: 302 LLVWNRMI-FPNGRSITLERQPGADAEGYAGLEDGVDYHWGELFKAAALSTLLSVGAEAG 360 Query: 340 ERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEV 399 + + + GAS + ++R P + I G V Sbjct: 361 SSGQESDIA--------------RALRNGASNSVNQTGQQIVQRQLNIAPTLTIRPGFPV 406 Query: 400 TVVFQDGFQLKTVE 413 V+ L+ Sbjct: 407 RVIVTRDLVLEPYG 420 >UniRef50_A3EW14 Putative conjugal transfer protein (TrbI) n=2 Tax=Leptospirillum sp. Group II RepID=A3EW14_9BACT Length = 425 Score = 98.4 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 72/277 (25%), Gaps = 8/277 (2%) Query: 131 TGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVP 190 G P P P + P P T + + Sbjct: 146 GGLENGTSAPPPLPEGPHPATAVLPPALPNLSGGGQNTPQGKPSSYEQTNMQDQKARFLK 205 Query: 191 VPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGL 250 Q + N + S + +GS A L+EG +++ Sbjct: 206 NSREKQSDIL-PNPVRDPVSPFEVQAGSVIHAELVEGINSDLPGEVTAQVTGDVYDSINE 264 Query: 251 VEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNG 310 + + G + A G R ++ I DG++ID+ V G G Sbjct: 265 QILLIPQGSKIVGKYDSKVAVGQT---RVLMAWERII-FPDGRSIDLSGMPGVDLEGYAG 320 Query: 311 IKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGAS 370 V KI G A V Q + +G ++ + + IG Sbjct: 321 FHDLVDNHYLKIFGNAILMSLVMAGAQMSQPGGGYGLG--GMNSFSNPSMGQAAIGS-VG 377 Query: 371 KAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGF 407 + + Y+ P + I G V Sbjct: 378 QNMSMTMEQYLGNTMNIQPTLKIRPGYRFDVTVTKDM 414 >UniRef50_Q6AIG3 Probable conjugal transfer protein TrbI n=1 Tax=Desulfotalea psychrophila RepID=Q6AIG3_DESPS Length = 415 Score = 98.1 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 59/394 (14%), Positives = 117/394 (29%), Gaps = 16/394 (4%) Query: 24 ASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVR--QHATTEMQVTAAQM 81 +A GA+ L + S NG E+E + + T K + A + Sbjct: 24 FAATVGAIMLLIMLYSINGNKKVEREAEQSVVTIETTEEQTKADYGVASLPTPPNEAGTI 83 Query: 82 QKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPAS 141 + L +++ + Q LA+ + N + A P+ + + Sbjct: 84 RAAKSTAAPLLPAKPITVITQRQKTQVEIQHEKELAKVREWKITNQLKALNSPLIEKKIT 143 Query: 142 PPGPEGEPQPGNTPVSFPPQGSVA-----VPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQ 196 +TP + G A NG P Q S + ++ Sbjct: 144 GNESNFSSTLPSTPSASTSGGGGANARFDQLKNQLAKVQNGSATPAQPLKSSSGLTSKPS 203 Query: 197 RKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNS 256 + +T ++ + + +G+ A+++ G ++ + + Sbjct: 204 Q--WTSQYTREAGAQFELKTGTVIPALMLTGINSQLAGEITGQVSQNIYDTATGQYLIIP 261 Query: 257 KTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVV 316 + +G + G ER V + + DG ++ + V + G G+K +V Sbjct: 262 QGTRISGNYASDVQVGQ---ERLFVVWKRLV-FPDGSSVTLDGLQGVDYAGYTGLKDQVD 317 Query: 317 MRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTL 376 KI G A + G G A G ++ +G + Sbjct: 318 NHYAKIFGNAIVMSLITG---GSAYAIDSLNDNGNNDDRNRRITIQSELGTAVATQLSQT 374 Query: 377 SDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLK 410 ++R P I I G V+ Sbjct: 375 GLALLQRNMNIAPTIKIRPGYRFNVMVVKDMVFD 408 >UniRef50_D1AYI6 Conjugation TrbI family protein n=2 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AYI6_STRM9 Length = 467 Score = 98.1 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 46/408 (11%), Positives = 115/408 (28%), Gaps = 37/408 (9%) Query: 11 KQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHA 70 K + L +V+ +I G + ++ + + + R Sbjct: 91 KNFKTLFAIVILILLSIFGIVIYKNLP------------KAFESEEEITVADPNNFRISD 138 Query: 71 TTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIE-KLGQDNAALAEQVKALGANPVT 129 E +K E+I+ E N + + +++ L + + Sbjct: 139 IKEDDED-KAFEK-LEDIKDESKNNNNENIEINNKVDDNLDLEKNIKKSKFDNYEEEKNK 196 Query: 130 ATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSV 189 E + + A G G + + + + Sbjct: 197 KEYEELDRAIAELEGNSGVNEVSGRKHNGLAFFKKEKENDKEKKKERNNSKYINLL---E 253 Query: 190 PVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQLRI 247 +I ++ +N+ + + GS A+ + D SV R Sbjct: 254 NRKEKIDEEINRKNKIAYSFNDFVVQQGSLIPAIFLTEVNTDLPGSVLAQVRENIYDSRS 313 Query: 248 TGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRG 307 + +P G + G R V +S L +GK +++ G Sbjct: 314 GEYLLIPKGTK--IYGRYESNVDKGQT---RVFVVWDKLS-LPNGKFVELTEFQSADALG 367 Query: 308 KNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIG- 366 +G+ + ++G + + + + G + + G + G Sbjct: 368 NSGVNDKTNNHTWSLIGNSILSSVL---------NFTDTLANGVSFSVGGVKLGLNGQSK 418 Query: 367 -GGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 + ++ + +++ + P I I G + ++ +L+ + Sbjct: 419 EEKGGSPFKEVTSHLVRKEVERQPTITIRRGYKFNIIVNGDLELEKYK 466 >UniRef50_Q1NCN7 Conjugal transfer protein trbI n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NCN7_9SPHN Length = 397 Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 45/304 (14%), Positives = 77/304 (25%), Gaps = 23/304 (7%) Query: 109 LGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPP 168 L L A G N A + + Sbjct: 109 LRAQQQHLDA--DAPGGNRPAADAAEAERQARLAELKAARESGILVQTKADDHAAEVPAL 166 Query: 169 PTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYI-PSGSFAKAMLIEG 227 PT P T P + V R P+ P++ +GS LI G Sbjct: 167 PTIMVP-PDPTAPQTPQGRKVAFTERPNTGSDVNTSRLSPPASPFLLAAGSIISGSLITG 225 Query: 228 ADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNIS 287 +++ T + + G + + A+G RA+V + + Sbjct: 226 LNSDLPGLVTAQVTQNVFDSTTGQILLVPQGARLIGKYDSIVAFGQ---RRALVIWQRLI 282 Query: 288 CLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAV 347 L DG ++ + G G+ +V + +L A + Sbjct: 283 -LPDGSSLRLDNFPATDAAGYAGLADKVDFHSWSLLKGVAIATLLG-------------- 327 Query: 348 GLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGF 407 +G+ L I + D R P I + G V ++ Sbjct: 328 -VGSELTINGESDLVEAIRESTQQNISRAGDQITSRNLDIQPTIIVRPGTPVRLLVSRDL 386 Query: 408 QLKT 411 L Sbjct: 387 ILAP 390 >UniRef50_B0T9T7 Conjugation TrbI family protein n=1 Tax=Caulobacter sp. K31 RepID=B0T9T7_CAUSK Length = 418 Score = 97.3 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 54/407 (13%), Positives = 108/407 (26%), Gaps = 27/407 (6%) Query: 8 VKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVR 67 + + + V + GG + G Q + Sbjct: 36 TRWNRKYLMAGAAVLASIVAGGFYLGFGGAHATKGRPDDSQNAADTSSPQTPEIATRYAA 95 Query: 68 QHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANP 127 +A ++ + + ++ Q AA + + A A+P Sbjct: 96 GYADPAVRPGTTSLPPPDALAPPAPTTQAAGQPGQPAPVDPAVQ--AAREQALAARSASP 153 Query: 128 VTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQ 187 + PQ + +P P P G+ PP +A P Sbjct: 154 FFGGAQAQPQAASQTGPLAPDPGPMLAAALVPGFGT---PPASAAGDVQ----PANGQAG 206 Query: 188 SVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQL 245 + + + + S + +G+ A LI D V + Sbjct: 207 KRQFAAGARVDDYLTSPLQAPISPWEVKAGTIISAALITAINSDLPGQVIAQVTEPVYDH 266 Query: 246 RITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSF 305 R V +P G + A G R+++ + + DG++I++ Sbjct: 267 RTGRTVLIPQGSR--LIGQYDSQVAHGQ---SRSLIAWNRVI-MPDGRSINIGSMAGADL 320 Query: 306 RGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGI 365 G G++ + ++ + + A + G + Sbjct: 321 SGAAGLQDKTDGHFWQLARGVALSTVFSVGAAAAQDAGTRSSGGLVINS----------A 370 Query: 366 GGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTV 412 G G S +AQ + R + I AG + V+ L Sbjct: 371 GSGISTSAQQVGQQVTARDLNRQATLRIRAGWPLRVIVNKDMILAPY 417 >UniRef50_Q3JDD1 Putative uncharacterized protein n=4 Tax=Gammaproteobacteria RepID=Q3JDD1_NITOC Length = 473 Score = 96.9 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 49/429 (11%), Positives = 113/429 (26%), Gaps = 44/429 (10%) Query: 32 YLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRE 91 L V + + + + +T V ++ ++++ ++ ++ Sbjct: 38 LLEAVPQAPKPDADTPADTIKTLTANVSAM------TSELNALRRDNTALKQENRDLIKD 91 Query: 92 LDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGA---------NPVTATGEPVPQMPASP 142 + + + + +AA E A+ A N + + Sbjct: 92 RKQIENNVLSRVQTALETKRMDAAPTETTSAIAALTARVDSLTNRFGTSSTRPSSTGSDI 151 Query: 143 PGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTR 202 P G G + V T G+ T + + S + + +V + Sbjct: 152 PIGLGLDGIGTSAAESESLVWVNPLEFTPSPDGDKETLLNRFSRTSRNALDGTRPEVQSL 211 Query: 203 NEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGN-------ESTVPMQLRITGLVEMPN 255 +P + + + G+ ++ G +P ++ N Sbjct: 212 VAKGSDALNTALPVYTVPRNATLIGSTGMTALVGRVPIQGQVRDPMPFKVITGKENLAAN 271 Query: 256 SKTYD-ATGCFVGLEAWGD--VSSERAIVRTRNISCLKDGKTIDMPIK------------ 300 G A GD +S + + +DG + Sbjct: 272 GLRIPGVEGMIWSGTAIGDWTLSCVTGKLESVTFV-FEDGTIQTLSSDENQLGGSSGNSD 330 Query: 301 ---GHV-SFRGKNGIKGEVVMRNGKILGWAW--GAGFVDGIGQGMERASQPAVGLGATAA 354 G + RG I GE L A G + G + Sbjct: 331 RPLGWISDARGIPCITGERKTNAPAFLAQRIGVMALQAAGEAAAQSETTTLISDSGTATS 390 Query: 355 YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 +G+ K +G + ++ + +R Q + + AG E+ + + Sbjct: 391 VVSGETGKYVLGKTLGGGSDEVAQWLRERQAQSFDAVFVPAGIELAIHVDHELPIDFHSN 450 Query: 415 MALERTQSR 423 ++ Sbjct: 451 GRKLHHETN 459 >UniRef50_C4YZI3 F pilus assembly protein TraB n=1 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4YZI3_9RICK Length = 235 Score = 96.5 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 46/205 (22%), Positives = 76/205 (37%), Gaps = 23/205 (11%) Query: 279 AIVRTRNISCLKDGKTIDMP-IKGHVSFRGK--------NGIKGEVVMRN-GKILGWAW- 327 V C + + ++G + G GI G ++ ++ Sbjct: 16 GYVVFITFCCFLFQEIVFADTLEGQLDRIGTLSTGKLKTIGISGATILAAIWAVIKGNLR 75 Query: 328 GAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQY 387 AG + IG + + LK G+ G A + L+D+ IKRAE Sbjct: 76 LAGAIVAIGIILGFYLDWVSSGMKIS-------LKAGVYSGTGNALEKLADFAIKRAESM 128 Query: 388 HPVIPIGAGNEVTVVFQDGFQL-KTVEEMALERTQSR-AEEDN--PESPVPVPPSAESHL 443 PVI +G+G V VVF+ GF L + EE L +++N PS + + Sbjct: 129 SPVIVVGSGRVVDVVFRKGFDLIDSGEEQQLIAYGGNFTQQENYRNHQNNNHYPSGSNRI 188 Query: 444 NGFNTDQMLKQLGNLNPQQFMSGSQ 468 N F + K L ++F+ + Sbjct: 189 NSFGNNNFSKTNQKLR-ERFLKDDE 212 >UniRef50_C6BT47 Conjugation TrbI family protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BT47_DESAD Length = 403 Score = 96.1 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 119/400 (29%), Gaps = 25/400 (6%) Query: 10 RKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQH 69 ++ + I VV + Y N E+ V + T + Sbjct: 16 KRNNRIIIICVVMAMMIVSVMAYSLYNSSKKNKAAKEEKAAVTESDIRQTLTEPETFGLS 75 Query: 70 ATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVT 129 + + + ++I + + +++ I++L + E++KA A P+ Sbjct: 76 LPPKEEKKEEKKLPAQDKISVTVVRPIEPTEAEKQHIKELQELRTFKLERMKAALAAPL- 134 Query: 130 ATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSV 189 + MP + G+ P + +P + P G + + + Sbjct: 135 ---KIQASMPEKKNVKVIQTDIGDVRSRHP----ITLPNMSNTAPTEGNDQKDKEAFLNS 187 Query: 190 PVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQLRI 247 ++ + + +GS ++I G D + G S Sbjct: 188 RAAKDGSWQLPYERVPGKQ---FELKTGSVIAGIMITGINSDLPGQIIGQVSQNIYDTAT 244 Query: 248 TGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRG 307 + +P G + A G R +V I DG +I + I G Sbjct: 245 GQYMLIPQGARM--IGVYDSRVAAGQT---RVLVAWNRII-FPDGSSITLGIMPGTDVGG 298 Query: 308 KNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGG 367 G G+V +I G + + G G + + G++++ L+ +G Sbjct: 299 YAGYSGDVDNHYLRIFGSSAIMSLISG-GMAF---AMDSFNKGSSSSDNPS--LQDELGS 352 Query: 368 GASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGF 407 S + ++ P I G +V Sbjct: 353 ALSSQLGQSTLSLLQNNMAIKPAISTAPGKRFNMVVTKDI 392 >UniRef50_B5ZFY5 Conjugation TrbI family protein n=3 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZFY5_GLUDA Length = 386 Score = 96.1 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 44/299 (14%), Positives = 83/299 (27%), Gaps = 26/299 (8%) Query: 125 ANPVTATGEPVPQMPASPPGPEGEPQPGNTPVS---FPPQGSVAVPPPTAFYPGNGVTPP 181 V A G P PA P + VS Q P Sbjct: 109 KAGVGAPGMATPAAPADPEKQRMAQEQEAARVSHLFTQTQVGRNSAAPVTAGATPVPAAG 168 Query: 182 PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNES 239 + + ++ + PS I +GS LI G D VT + Sbjct: 169 AATDRNQAFLDGPVDQRTVSAARLTTVPSPYVIQAGSIIPGALITGIRSDLPGEVTAQVT 228 Query: 240 TVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPI 299 ++ +P G + A+G R ++ + + + + Sbjct: 229 ENVYDSPTGHILLVPQG--AKLIGRYDSQIAYGQT---RVLLVWTRLIRGANDSIV-LEN 282 Query: 300 KGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGD 359 + G G++ + G++ A + + +G+ A G + Sbjct: 283 EPAADAAGFAGLQDQTDNHWGEVFKAALVSTVLS---------------VGSEADIGGSN 327 Query: 360 VLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 + + G S+ + + + R+ P I G V V+ L + A Sbjct: 328 GIAQALRTGGSQGFNQIGEQMVGRSLNIQPTNTIRRGFPVRVMVHRDLVLSPYRQEASR 386 >UniRef50_A7HU77 Conjugation TrbI family protein n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HU77_PARL1 Length = 431 Score = 95.4 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 74/250 (29%), Gaps = 24/250 (9%) Query: 167 PPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIE 226 P + + + + ++ R+ ++ S + +GS A LI Sbjct: 202 PKRDLSSVASAEGDQNHQQRKLDFLNRGPDQDIYNRHALREPVSAHQLMAGSVIAASLIT 261 Query: 227 GA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTR 284 G D V + + +P G + + A+G RA++ Sbjct: 262 GLNSDLPGLVVAQITENIFDTVSGKTLLIPQGSR--LIGSYDSVVAFGQ---SRALLVWH 316 Query: 285 NISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQ 344 I + DG +I + G G+ +V ++ A + Sbjct: 317 RII-MPDGSSIVIDNLPATDAAGYAGVADKVDYHTWALVKGVALATLLS----------- 364 Query: 345 PAVGLGATAAYGAGDV-LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVF 403 +G ++G+ + L I + ++ P I + G + V+ Sbjct: 365 ----VGTELSFGSEESDLLRAIRQSTQQNVSQAGQRLTEKNLNIQPTITVRPGWPIRVIV 420 Query: 404 QDGFQLKTVE 413 Q L+ Sbjct: 421 QKDLILRPYR 430 >UniRef50_B0T9F9 Conjugation TrbI family protein n=1 Tax=Caulobacter sp. K31 RepID=B0T9F9_CAUSK Length = 408 Score = 95.0 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 47/253 (18%), Positives = 83/253 (32%), Gaps = 21/253 (8%) Query: 165 AVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAM 223 ++PP P TP ++ + + + Q P PY + +GS A Sbjct: 170 SLPPLAFAGPEAAPTPAAGLSAKEGFIARASAPQANYAPGLPQPPLSPYEVKAGSVIAAA 229 Query: 224 LIEGA--DANASVTGNESTVPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAI 280 L+ G D V T P+ TG V + P G + +G +R + Sbjct: 230 LVTGLNSDLPGMVVAQV-TQPVFDHATGRVMLIPQGAR--LIGKYDSQVGYGQ---DRVL 283 Query: 281 VRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGME 340 + + G+++D+ G G+ +L A G + IG Sbjct: 284 LVWTRLI-YPSGRSVDLGAMTGADVTGAGGLSDRTDTHL-PVLARAIGLSTLISIGGAAA 341 Query: 341 RASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVT 400 + S G+ +++ GG + A ++R Q +P + I G V Sbjct: 342 QNSVAR---------GSDNLVLQDGAGGIASQASQTGQRLVERDLQRNPTLRIRPGFPVR 392 Query: 401 VVFQDGFQLKTVE 413 V+ L Sbjct: 393 VMVDKDLILPPEG 405 >UniRef50_Q1ZJS8 Putative uncharacterized protein n=1 Tax=Photobacterium angustum S14 RepID=Q1ZJS8_PHOAS Length = 476 Score = 94.2 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 49/467 (10%), Positives = 118/467 (25%), Gaps = 63/467 (13%) Query: 18 IVVVGTASAIGGALYLSDVDMSGNGETVAEQEP----------------VPDMTGVVDTT 61 ++V+ + S + E ++ +DT Sbjct: 1 MIVLAILLIYVFVQKTFFGEDSAPASKIVENHKNEGTNNEVPTVVVDKTAVEIGEALDTP 60 Query: 62 FDDKVRQHATTEM--------QVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLG--- 110 + A + Q T Q+Q + +R+++++L K++ + + Sbjct: 61 EEKLRSMAARINLISDNNQRIQQTLEATQEQNDLLRKQIELLQKKQPPSELEQKATKVAE 120 Query: 111 -------QDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVS------ 157 + + + P G P V Sbjct: 121 TTNSIFKAAIETAKDMPNEIRKATRQEPVYEDSYLDTGEELPIGTPSLKPQLVDLSDYNK 180 Query: 158 --FPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIP 215 + P + P Q Y ++ N + P IP Sbjct: 181 PVYTPSNNDEWIQPIDVKIEKSPNGTKQYVYPTLKKTNNESSDNNINSSKTTTKPEP-IP 239 Query: 216 SGSFAKAMLIEGADANASVTGN-------ESTVPMQLRITGLVEMPNSKTY-DATGCFVG 267 G+ + ++ G +L+++ N +T + G V Sbjct: 240 FGTINDGATLLRTRTMTAMIGRLPRKGKIVDAYKFKLKVSRENLASNYQTIPNLDGVIVQ 299 Query: 268 LEAWGD--VSSERAIVRTRNISCLKDGKTIDMPIK-------GHV-SFRGKNGIKGEVVM 317 + GD + R V + DG+T + G++ +G I G+ + Sbjct: 300 GKTSGDRVLKCVRGTVTKITFT-FTDGRTTTHGGEDEQEEGLGYLSDAQGVPCISGQYIS 358 Query: 318 RNGKILGWAWGAGFVDGIGQGMERASQPAVGLGA-TAAYGAGDVLKMGIGGGASKAAQTL 376 + + + + + + + G G K+ + +++ Sbjct: 359 NDEQYVASNVLLDGFSAAAKAFGDSEKTRIISGDEVTEVVTGSSEKVALSEMFGAGSESG 418 Query: 377 SDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERTQSR 423 ++ + I + V V + + + Sbjct: 419 ANIMKEFMSDSFSAIYVPNNTVVDVHIEQDIPIDYHPDGRKISYGDE 465 >UniRef50_A7FC40 Conjugal transfer protein TrbI n=1 Tax=Yersinia pseudotuberculosis IP 31758 RepID=A7FC40_YERP3 Length = 459 Score = 93.8 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 44/368 (11%), Positives = 97/368 (26%), Gaps = 39/368 (10%) Query: 46 AEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRR 105 P + D D + + ++Q ++ + L Sbjct: 120 EPPVPPRNNGSRQDIPNDPDLDRIKMAKLQQFEEAVKAKTTVSIPTLRDNATGADGATPT 179 Query: 106 IEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVA 165 ++ A+ Q+ T+ + Q G G+ + Sbjct: 180 RDQTLARLEAVRRQIDQTQNEDPTSAYKKRLQQLQGNGGMSGDNASSGGDGLATSSSNDI 239 Query: 166 VPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAML 224 + N + P P+ I +G+ ++ Sbjct: 240 -----------------------EQFAGTGVTDRWALNTKVEAPRSPFEIRAGAVVPGVM 276 Query: 225 IEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVR 282 I G D + G + + +P TG + A+G + ++ Sbjct: 277 ISGVNSDLPGQIMGQVTQDVFDTPTGKHLLIPQGTR--LTGSYTSDVAFGQSA---VMIA 331 Query: 283 TRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA 342 + + DGK +D+ G +G + +V +I A+ + G+ G+ + Sbjct: 332 WQRMI-FPDGKALDIAAMPGADSAGYSGFRDQVNNHLFRIFSSAFL---LSGVTAGVTYS 387 Query: 343 SQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVV 402 + A L +G + + I + P + I G ++ Sbjct: 388 QGRNENSNGNNSPTASSALSEALGQQFGQVTAQM----IAKNLNIAPTLEIRPGYRFNII 443 Query: 403 FQDGFQLK 410 K Sbjct: 444 VIKDMTFK 451 >UniRef50_A5V2M5 Conjugation TrbI family protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V2M5_SPHWW Length = 395 Score = 90.3 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 76/297 (25%), Gaps = 22/297 (7%) Query: 117 AEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGN 176 E A + Q S G G + P A Sbjct: 111 TESGAAPSTTEADQAEQRRRQQAESARGSRLFAGAGEGRGPPQAANATPTEPAPAPPAEG 170 Query: 177 GVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASV 234 + ++ V P + +GS A LI G D V Sbjct: 171 TSRAGAPLDRRAAFVAGGTPEPTTNSGRLTPPPGRHVVTAGSTIAAALITGLSSDLAGQV 230 Query: 235 TGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKT 294 + +P G + + G RA+V + L DG++ Sbjct: 231 VAQVTEDVFDSVTGRTKLIPQGTR--LLGVYDSNVSTGQ---SRALVVWTRMI-LPDGRS 284 Query: 295 IDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAA 354 I + G++G V G IL + + Q A+ Sbjct: 285 IGLDRLVGTDAAGQSGFADRVNNHWGTILRAGLLSTLLGVGTQASGFGQNDAIA------ 338 Query: 355 YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKT 411 D ++ G +A + ++R P I + G V V+ L+ Sbjct: 339 ----DAIRDSAGQTVGRAGDRI----VERQLGIQPTISVRPGARVRVLVSRDLILEP 387 >UniRef50_B0T8R0 Conjugation TrbI family protein n=2 Tax=Caulobacter RepID=B0T8R0_CAUSK Length = 384 Score = 90.3 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 89/300 (29%), Gaps = 19/300 (6%) Query: 120 VKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVT 179 + A A + A + PP +P A G Sbjct: 103 LSAQRARGLEAPASSSDPALSQPPPIPRPADRTMSPDKTVQAREAARSAGLFASVAPGRA 162 Query: 180 PPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIP-SGSFAKAMLIEGADANASVTGNE 238 PP R+ + T E Q P+ PY+ +GS A L+ G ++A+ Sbjct: 163 GPPSPAAPLDVAGARVVDERATSPERLQAPASPYLLQAGSIIPAALVTGLRSDAAGLAIA 222 Query: 239 STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMP 298 G + G + G R V + L G++I + Sbjct: 223 QVSQDVFDSLGGHHLLIPAGSRLIGQYETATHVGQ---SRLSVAWTRLI-LPSGRSIMLD 278 Query: 299 IKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAG 358 +G G++ V +L A + + + + G Sbjct: 279 KLPGADAQGMAGLEDGVDRHGKAVLAAAALSTVLAIGAEAGQS--------------SGG 324 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 D L+ I GAS++ + + R+ P + I G + V+ L+ +E A Sbjct: 325 DDLERAIRRGASQSISDVGQQAVGRSLALTPTLTIRPGAPLRVLLSRDLVLEPYDEEARP 384 >UniRef50_D1EBX3 TrbI protein n=1 Tax=Neisseria gonorrhoeae SK-92-679 RepID=D1EBX3_NEIGO Length = 479 Score = 90.3 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 47/342 (13%), Positives = 84/342 (24%), Gaps = 25/342 (7%) Query: 84 QYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPP 143 + ++ ++ Q A+ + L ++++G P Sbjct: 136 EVDQEAEQIRQAKAQMFQAALAAPTKVDVVASTSRGSSGLYTAALSSSGSGTPNRSEMLA 195 Query: 144 GPEGEPQPGNTPVSFPP--------QGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRI 195 + S P Q + A A + P P I Sbjct: 196 QIAEVQRMSENAGSNPAEVERVYNQQLANAQQMAAAGGQDGVQGAGGMPGLNTPPTPGNI 255 Query: 196 QRKVFTR-------NEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQLR 246 R+ + P+ I SG+ A LI G D V S Sbjct: 256 PRQTAQNGGNNWRLESQVERPNAYMIRSGAVIPATLISGINSDLPGMVQAQISQNVYDTA 315 Query: 247 ITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFR 306 + +P G + G R + I DGK +D+ S Sbjct: 316 TGRHLLLPQGSR--LVGTYSSGINLGQ---RRLFIAWNRII-FPDGKALDIGDMPGASGA 369 Query: 307 GKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIG 366 G G + G++ G A V + + G ++ + Sbjct: 370 GYAGFSDRINNHYGRLWGNALMLSLVG--ASITYGVDKNSNNNNNGNNNGNNSTVRGALS 427 Query: 367 GGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 + I++ P + I G V+ Sbjct: 428 ESLGQTFGQAVSQSIQKNMNVSPTLEIRPGYRFNVILTKDID 469 >UniRef50_C7I5U4 Conjugation TrbI family protein n=2 Tax=Thiomonas intermedia K12 RepID=C7I5U4_THIIN Length = 469 Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 34/286 (11%), Positives = 66/286 (23%), Gaps = 17/286 (5%) Query: 127 PVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTY 186 A PQ P ++ A + Sbjct: 198 QSGAAAPSQADALRKLTALAATPQSAADPNLQKALAALQGASGLAGVDQSPQAQNKAFLA 257 Query: 187 QSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLR 246 + + S + +G+ A+++ G D++ T Sbjct: 258 AQDDKTSNGYLDA----AAQPPISNHELFAGAVIPAVMLTGIDSDLPGTITAQVRQTVYD 313 Query: 247 ITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFR 306 + + G + A+G R +V + +G +D+ Sbjct: 314 SLNPTVVLIPQGTRIIGEYSSDVAYGQ---SRVLVAWNRLI-FPNGAMMDLKGMSGTDGE 369 Query: 307 GKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIG 366 G+ G +V +I G A + Q + GA A + Sbjct: 370 GQAGFHDQVDNHYMRIFGSAVLMSMLGVGAQLSQPQ-----NAGALNTPSASQQAASALA 424 Query: 367 GGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTV 412 L + + P + I G V+ L Sbjct: 425 QQMDNVGTNL----LNKNLSIQPTLTIRPGYAFNVLVNRTMILPPY 466 >UniRef50_C6NY89 TrbI protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NY89_9GAMM Length = 426 Score = 90.0 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 49/318 (15%), Positives = 84/318 (26%), Gaps = 15/318 (4%) Query: 123 LGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPP 182 P P G +G S P G PT + + Sbjct: 117 PVNAPQNTRPSPQMLAFQQALGQQGGSGGKVISWSGPSAGEPLSLQPTGMTASDALAQSL 176 Query: 183 QVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNEST 240 + + P+ V++ + ++ S + G+ +L G D VT Sbjct: 177 AMAKAASQKPSDASVSVYSTHLVRKEVSPYELLQGTVIPGILTTGIKSDIPGQVTA-VVP 235 Query: 241 VPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPI 299 P+ + G + P G + A G R V I +G I + Sbjct: 236 HPVYNSLNGAYVLIPAGSR--LIGQYAASSAMGQT---RVNVAWTRIE-FPNGTYIQLSK 289 Query: 300 KGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGD 359 + G G V I A +D +G + + + A Sbjct: 290 MPGTAPDGYAGFHDLVNNHTWTIFKNALLLSLID-VGMAVASPTSTSTNTTGVTGNQALQ 348 Query: 360 VLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALER 419 + + +A + Y+ A P + I G VV Sbjct: 349 DGEQALAQTFGQAEAQMFQKYVNIA----PTLTIRPGYAFNVVVTKDLVFPGPYRHGTNL 404 Query: 420 TQSRAEEDNPESPVPVPP 437 + A +P P + P Sbjct: 405 VATSANPRSPAQPTTIDP 422 >UniRef50_A1VQ87 Conjugation TrbI family protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VQ87_POLNA Length = 490 Score = 89.2 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 43/298 (14%), Positives = 82/298 (27%), Gaps = 17/298 (5%) Query: 118 EQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNG 177 E V ++A AS V+ S +P A G Sbjct: 208 EGVGGGVNQKLSAANGRAANARASATAEAMRMANLPAGVAGISSNSGNLPATLAGGGSAG 267 Query: 178 VTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVT 235 + P ++ + K + +GS A+++ G D ++ Sbjct: 268 LDPAVAAQARNKAFMKEAFDNGYLPELLKPKLGEFELTAGSVIPAVMLSGINSDLPGTIV 327 Query: 236 GNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTI 295 V +P G + A+G R + + L +G I Sbjct: 328 AQTRQTVYATNDPDAVVIPQGSR--LIGRYSADVAYGQ---SRVLAAWDELI-LPNGSRI 381 Query: 296 DMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAY 355 + +G++GI+ +V K A F+ Q + +Q GA Sbjct: 382 SLHGMSAADGQGQSGIEDQVNNHFWKTWSSALLVSFLGVAAQQSQPQNQ-----GAFNTP 436 Query: 356 GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 S + + ++++ P + + G V+ L T Sbjct: 437 SGSAQASAAAMNSLSDVSSKI----LQKSLNISPTLQVRPGMAFNVMVNRSIILPTYR 490 >UniRef50_B8H104 Conjugal transfer protein trbI n=6 Tax=Alphaproteobacteria RepID=B8H104_CAUCN Length = 418 Score = 88.0 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 61/405 (15%), Positives = 115/405 (28%), Gaps = 31/405 (7%) Query: 10 RKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQH 69 R+ + + +V A + LS + + + V T + VRQ Sbjct: 38 RRGLVIGAVGIVAIALSGLAWFALS-------PRALQAAKAPTVSSAVDRGTSAEAVRQL 90 Query: 70 ATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVT 129 + Q A V+N QR D + G D + Sbjct: 91 PSDYAQGGAPPRLGPPLPGDLGRAVINHQRRDGLVVGDA-GSDTPMPQPSTDQQAVDAER 149 Query: 130 ATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVA-VPPPTAFYPGNGVTPPPQVTYQS 188 E + + V+ S PP P P Q + Sbjct: 150 QWREGQARQAREAGVMVQVTRRAEAAVAPNLLASPEFATPPPVSSPQGIGEPGDQNRKMA 209 Query: 189 VPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQLR 246 ++T ++ + S + +G+ A LI G D V + Sbjct: 210 FMGAVPGGESIYTAHQLETPRSPYQVMAGTVISASLITGLNSDLPGLVVAQVTENVFDSA 269 Query: 247 ITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFR 306 ++ +P G + + A+G RA++ + I L DG +I + Sbjct: 270 TGRILLIPQGAR--LIGSYDSVVAFGQ---RRALLVWKRII-LPDGASIQLDNLPATDTE 323 Query: 307 GKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIG 366 G G+ +V ++L + + G+G + LG L I Sbjct: 324 GHAGLADQVDFHTWRLLKGVVLSTLL-GVG--------TKLSLG-----DGESDLVRAIR 369 Query: 367 GGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKT 411 ++A + + P + + G + + L+ Sbjct: 370 QSTQQSASQAGQQIVAKQLAVQPTLRVRPGWPLRAIVHKDLILRP 414 >UniRef50_C6XER7 Conjugation TrbI family protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XER7_METSD Length = 423 Score = 87.3 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 40/310 (12%), Positives = 76/310 (24%), Gaps = 10/310 (3%) Query: 98 QRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVS 157 E + + + PV PG + Sbjct: 117 TLSSSVMETEAAPSPKVDTIAEKRRRDRERAMESNGPVSGFNEVTASLSNSENPGASKAE 176 Query: 158 FPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSG 217 + + + + + K + I +G Sbjct: 177 VEALLAAQAAQAKTPVDEQDDQNKQVRKEKFLKRAEAENEEGYLAAMRKPQITPYEIKAG 236 Query: 218 SFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSE 277 S A+L +++ + + G + A+G + Sbjct: 237 SVIPAVLKSAINSDLPGLIRGIVTDHVYDSKTGRYILIPRGSTLIGTYDSQIAYGQ---K 293 Query: 278 RAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQ 337 R + I DG T+ + G G+ GEV KI G A + + G Sbjct: 294 RLLAVWTKII-FPDGSTMALKGMPGADQEGSAGMSGEVDNHYLKIFGAALASSVISA-GY 351 Query: 338 GMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGN 397 + + Q VGLG T G + +G +A ++ + P + G Sbjct: 352 QISQGGQNVVGLG-TTVQTPGQTMASSLGQQLGQAGTAIT----TKNLNLQPTLTNPVGQ 406 Query: 398 EVTVVFQDGF 407 + Sbjct: 407 RFFINITKDL 416 >UniRef50_B9QRF5 Bacterial conjugation TrbI-like protein n=2 Tax=Alphaproteobacteria RepID=B9QRF5_9RHOB Length = 447 Score = 85.0 bits (208), Expect = 7e-15, Method: Composition-based stats. Identities = 49/369 (13%), Positives = 100/369 (27%), Gaps = 29/369 (7%) Query: 42 GETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGD 101 A E V + + + + Q + + Q ++ E Sbjct: 100 PVRAAVPEKVQKQRPFGNPFQPEPGKPDEVSAPQQSEPDWRAQLDQRFEE---------- 149 Query: 102 DQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQ 161 ++++++ + + + A +P T + +G T P Sbjct: 150 --QQLQEMHRQRMKRLQSIDAAHDSPTTVNLGDLQGQGEGAQTTQGNQTVNGTFTRGPTS 207 Query: 162 GSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAK 221 + A G P + I + N S + GS Sbjct: 208 PDLLSAALQAAQGGTANADPNGQYGKQAFFNQDITEAGYLANRVVPQQSPYELKRGSVIP 267 Query: 222 AMLIEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERA 279 A LI G D +TG L+ +P G + ++G R Sbjct: 268 ATLITGINSDLPGRITGQVRQNVYDSATGHLLLIPQGTK--LFGRYDSDVSFGQ---NRV 322 Query: 280 IVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGM 339 +V +I +G T+ + G V G G K +V + G A + Sbjct: 323 LVVWTDII-FPNGATLQISSMGGVDGEGYGGFKDKVNNHYLRTFGSAALLAIIGTG---- 377 Query: 340 ERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEV 399 + + ++ D + ++ + + I + P + I G Sbjct: 378 -----IDMAVPESSTLATQDTASDAVRRNFAEVFGRVVERSINKNLDVQPTVQIRPGYNF 432 Query: 400 TVVFQDGFQ 408 ++ Sbjct: 433 NILVDQDII 441 >UniRef50_B9NX79 Conjugal transfer protein TrbI n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NX79_9RHOB Length = 390 Score = 80.7 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 51/417 (12%), Positives = 105/417 (25%), Gaps = 49/417 (11%) Query: 12 QYLWLGIVVVGTASAIGGALYLSDV---DMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQ 68 ++ V A LY + G P T ++ Sbjct: 9 NLVFTLAVTTAIAGGGVAGLYFGGRYVLEQVGGTPREETAGPDQRTTAQIEREI------ 62 Query: 69 HATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKL-----GQDNAALAEQVKAL 123 A + + L + + + R ++L Q L + + Sbjct: 63 AALERAADRFNESAAEPSTQVTRLPQVEETEVPPEPRSDRLPAVLTEQAAETLKLREERR 122 Query: 124 GANPVTATGEPVPQMPA------SPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNG 177 G+ + + S E P + P ++P P + Sbjct: 123 QTALTAPLGKSLFTIEGIREARRSGQSALDESSPPGSTPPAEPVSPGSLPSPVSADVSAD 182 Query: 178 VTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGN 237 + + + + P + +GS A+L++ ++ Sbjct: 183 LAATARALAAPTSGID---------SYSVHRPGQVLLAAGSIIPAVLVDEIRSDLPGLIR 233 Query: 238 ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDM 297 + + + G + G R + + +G +D+ Sbjct: 234 ATITNDVYGTLEPGHVVIPRGSMLVGTYASQTHPGQ---RRLFITWTRV-LFPNGVALDL 289 Query: 298 PIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGA 357 G V G +GIKG GF + ++ VG T Sbjct: 290 EQAGGVDADGASGIKGRRRT------------GFFTAVLGTALISTAQNVGRKDTTNSDI 337 Query: 358 GDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 + ++ G LS+ Y P + AG + + F L+ + Sbjct: 338 AEAARIATGTAVGT----LSEQYFGNTLSQGPTFAVRAGTILNAQTERDFYLEGYTQ 390 >UniRef50_A5CDW0 Conjugative pilus assembly protein n=23 Tax=Orientia tsutsugamushi RepID=A5CDW0_ORITB Length = 156 Score = 80.3 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 9/104 (8%) Query: 315 VVMRNGKILGWAWGAGFVDGIGQGMERAS-----QPAVGLGA----TAAYGAGDVLKMGI 365 ++ + ++ + I + ++ + P + L A + GD L+ G Sbjct: 21 ILTHLAYYVPISYVSAIFSSIAKFLQTKAIKPDMTPTLNLVAGGQQQQEFQIGDALQSGA 80 Query: 366 GGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 GAS A L+D+ IKRA+ PVI + +G + VVF+ GF L Sbjct: 81 YSGASNAFDKLADFAIKRADSMSPVIVVASGRVIDVVFKKGFDL 124 >UniRef50_C5SHI4 Conjugation TrbI family protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SHI4_9CAUL Length = 352 Score = 79.9 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 49/315 (15%), Positives = 82/315 (26%), Gaps = 24/315 (7%) Query: 98 QRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVS 157 + G Q + L + E + L P +P GP E Q P Sbjct: 57 RAGATQEKAADLEKRVRPPTESLSGLPKTYADVPQLG-PPLPGDLGGPMLEAQRAELPPG 115 Query: 158 FPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSG 217 G A S P P +V + S + +G Sbjct: 116 AEVPGIQGPQQVAAGGAAAETPTGGLFVSVSQPYPPLSTIEVGKPTATVRKGSDLKVAAG 175 Query: 218 SFAKAMLIEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVS 275 + A LI G D V + R ++ +P G + Sbjct: 176 TIIAATLITGLNSDLPGVVLAQITEPVFDSRSGRIIVIPLGSR--LIGRYERATG---AR 230 Query: 276 SERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGI 335 +R V + L DG+ + G G+K V G + + + Sbjct: 231 QQRINVSWDKLV-LPDGRVATLKDALAADESGFVGLKDRVDYHPGALAKGLGLSTIL--- 286 Query: 336 GQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGA 395 L + G L + A + I++A I + Sbjct: 287 ------------ALADSRRGGDESDLTRALQEAAGRTFNEAGQKIIQQAVDAPATITVRP 334 Query: 396 GNEVTVVFQDGFQLK 410 G V ++ D ++ Sbjct: 335 GWPVRIILTDILTVE 349 >UniRef50_B5ZFJ3 Conjugation TrbI family protein n=2 Tax=Alphaproteobacteria RepID=B5ZFJ3_GLUDA Length = 397 Score = 78.8 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 85/302 (28%), Gaps = 22/302 (7%) Query: 120 VKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVT 179 +KA G T+ GE + ++ P G T Sbjct: 116 LKAQGQGKATSGGEDRRAAQEIEAAIASRLFVQTGERDHASEQAIPPAPGAPATQGRAST 175 Query: 180 PPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIE--GADANASVTGN 237 + + R + + S + +G+ L +D + G+ Sbjct: 176 TAGPQAGNLAFLEGQPDRATISPDRIMPRASPYVLQAGTVIAGALNTKISSDLPGQIVGH 235 Query: 238 ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDM 297 + + +P T G + ++G +R + + DG+++ + Sbjct: 236 VTQNVYDSPTGRYLLIPQGST--LFGAYNSGISFGQ---QRTQIIWTRLI-FPDGESLVL 289 Query: 298 PIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGA 357 G++G+ EV G++ A + + + Sbjct: 290 EKLPGGDAIGQSGLADEVNNHWGQLFKAALVTTLLSVGSEA--------------GTSQS 335 Query: 358 GDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMAL 417 + L I GAS + + I R+ P + G TV+ LK + Sbjct: 336 ENNLAQAIRSGASNGFSMVGNRLIDRSLNVQPTLTDRPGLPFTVLVGHDLLLKPYRDQGH 395 Query: 418 ER 419 R Sbjct: 396 IR 397 >UniRef50_B9ZQ82 Conjugation TrbI family protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZQ82_9GAMM Length = 446 Score = 78.8 bits (192), Expect = 5e-13, Method: Composition-based stats. Identities = 69/427 (16%), Positives = 116/427 (27%), Gaps = 39/427 (9%) Query: 6 TIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVP-------DMTGVV 58 + K L I++V ++ + G E +P+P D + Sbjct: 36 DKPRGKTSKKLAIIIVSAIGSVMALGMMMSNTADRAGGDAEEGDPLPGSSGSGRDFQQEI 95 Query: 59 DTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAE 118 + + + + E Q+ + + E + R D + D E Sbjct: 96 EEREREALERRRAREEQMRLDREMAEQEAPQENEREGPAIRPDAPVPGGQAQDDGLTERE 155 Query: 119 QV--KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSV------------ 164 +V + + + A + P E + G Sbjct: 156 RVMREQAAQSQIVAIAGQGSRASQGEPAEVSERERAQQGAEQMMAGMQERQEMAHEAMRQ 215 Query: 165 AVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAML 224 A P G P + R+ P + GS +L Sbjct: 216 AQQQPPGATGGRESRRNPNEEWLERSRERDANEMTPVRDRALDRPVVHE---GSVIPVVL 272 Query: 225 IEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVR 282 D +T + V +P G + A G +R I Sbjct: 273 QTSVNSDLPGMITALTTRDVRDSITGETVVIPRGSR--LVGEYNADVAEGQ---DRLIFA 327 Query: 283 TRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERA 342 DG+ I + G++G+ G+V LG AG + I G ER Sbjct: 328 FNRAI-FPDGRDIQLGAMQGADGEGRSGMDGDVNTHFWSRLGR---AGLIGAITMGAERQ 383 Query: 343 SQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVV 402 +QPA + G + A+ D + RA P I I AG + V+ Sbjct: 384 AQPANVTVIGGSGGGSTDGGTKAAEIFAGVAEDSIDRHRDRA----PTITIDAGTTMNVM 439 Query: 403 FQDGFQL 409 L Sbjct: 440 VNSDIVL 446 >UniRef50_D1LZG9 TrbI n=1 Tax=Rhizobium leguminosarum bv. viciae RepID=D1LZG9_RHILV Length = 445 Score = 78.4 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 73/278 (26%), Gaps = 23/278 (8%) Query: 147 GEPQPGNTPVSFPPQGSV--AVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNE 204 + G S G+ P+ V + + V Sbjct: 152 SGQRNGAARASTDAAGAGLFGASDPSGAQTAAASNGGGAVDNDRAFLKAMGGQGVDVSVA 211 Query: 205 GKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEM-PNSKTYDATG 263 + + +IP G+ + L +++ + G + P G Sbjct: 212 TENRRTDAWIPQGTMIRGTLETAINSDLAGMVKGIVRDDVYSFDGRRILIPAG--SSLIG 269 Query: 264 CFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRN---- 319 + G ER ++ + DG ++ + G G++G+ G V + Sbjct: 270 DYKSGVERGQ---ERILIVWTRMIR-GDGVSVQLGSYGT-DRLGRSGMTGVVDRKYWERF 324 Query: 320 GKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAY---------GAGDVLKMGIGGGAS 370 G G I Q ++ + + + D + + Sbjct: 325 GPPTMMTLIGGATQYIAQLGQKQDRNITIVNTDGTVTSIPQDNGSTSQDRAREIAAETIA 384 Query: 371 KAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 Q L + + P I I G+++ V Sbjct: 385 SGIQQLGTEAFQDSRNIRPTIHIPQGSDINVFVTRDLD 422 >UniRef50_Q1M9N3 Putative conjugative DNA transfer protein n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M9N3_RHIL3 Length = 457 Score = 78.4 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 57/407 (14%), Positives = 105/407 (25%), Gaps = 28/407 (6%) Query: 16 LGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMT-------GVVDTTFDDKVRQ 68 ++ A L + + + E D V +T +K Sbjct: 61 AVVLFFAVAGPTAALKVLGIGRDNDQAVSKVDMEVEKDSHRPVHLDFAVPASTEPEKKEL 120 Query: 69 HATTEMQVTAAQMQKQYEEI--RRELDVLNKQRGDD-----QRRIEKLGQDNAALAEQVK 121 + +Q Q E+ +++ V + + + + + A+ E+ Sbjct: 121 DPNAAWKAKIKALQDQIAELERKKQGSVSSGEIEALITRYNENTKRQFEDERKAMTEENA 180 Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPP 181 L A A E A + GSV V Sbjct: 181 RLRAAAERAEEERQRAEEAGKLQSGELKERQKLDKMQRESGSVVVDAADGPATTESDKSA 240 Query: 182 PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNES-T 240 + + T + G+ A+L D Sbjct: 241 TDQNQNARFLKTAASSTYPTSVSRPLPDPSRTVVQGTIISAVLETAIDTELPGNIRAQVM 300 Query: 241 VPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIK 300 P+ V MP+ G F +++ R ++ G++I + Sbjct: 301 EPVYSFDGARVLMPSG--TILIGEFNNDV---NLAQRRVLIAWNRAI-TPSGQSIALGST 354 Query: 301 GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV 360 G G++G +G V R G G A + + + G T+ G G Sbjct: 355 G-ADTLGRSGTEGNVNNRYGTKFGAAILISAITSLPSILSNR-NSQSKSGTTSKVGGGQD 412 Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGF 407 S A + + + P I I G E+ V+ Sbjct: 413 AGQ-----MSDTASDQARGVLDQYLSLPPAIKIPQGEEIRVLVNRDL 454 >UniRef50_C1F4R5 Putative conjugal transfer protein, TrbI family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F4R5_ACIC5 Length = 453 Score = 78.0 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 53/306 (17%), Positives = 87/306 (28%), Gaps = 30/306 (9%) Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP 180 +N V P AS P +V + Sbjct: 169 SRFASNLVYTRAPVKPSHNASSPALANGAGVTGPQQGTASSLTVQRRAESGRIAPQSAPD 228 Query: 181 PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTGNE 238 P + +R + P + Y G+ +L+ DA V Sbjct: 229 PAITSSAPGEQARTARRPEVDIDSAVGKPYVIY--EGTTLDTVLMNRLNGDAPGPVKALV 286 Query: 239 STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSE-----RAIVRTRNISCLKDGK 293 S P+ V +P G V EA S E R + + + DG Sbjct: 287 S-NPVYSHDRQHVLIP-------AGTVVLGEARAIGSPEIGHQRRMALVFHRMI-MPDGY 337 Query: 294 TIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATA 353 ++D+ + G G+KG+V KI G + G + G GQ G Sbjct: 338 SVDLDQFLGLGQSGAVGVKGKVNNHYLKIFGTSIALGVIAGAGQ--------IEEGGGII 389 Query: 354 AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 + G S++A ++ D ++ P I + G + V F L Sbjct: 390 STSGSQAFATGASANISQSATSVLDRFLD----IPPTITVREGQRIKVYFTQDLLLPAYN 445 Query: 414 EMALER 419 + + Sbjct: 446 RHRIPQ 451 >UniRef50_B6A5A6 Conjugation TrbI family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B6A5A6_RHILW Length = 444 Score = 76.9 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 75/278 (26%), Gaps = 24/278 (8%) Query: 148 EPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPP---QVTYQSVPVPNRIQRKVFTRNE 204 + G+ A P + G + V + + V Sbjct: 151 QSNRTTGAAQASADGASAGPFASGVGSGAQPSAAIDGNAVDSDRAFLKAMGGQGVEVSVA 210 Query: 205 GKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEM-PNSKTYDATG 263 + + +IP G+ + L +++ + G + P G Sbjct: 211 SQNRRTDAWIPQGTMIRGTLETAINSDLAGMVKGIVREDVYSFDGRRILIPAG--SSLIG 268 Query: 264 CFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRN---- 319 + G ER ++ + DG ++ + G G++G+ G V + Sbjct: 269 DYKSGVERGQ---ERILIVWTRMIR-GDGVSVQLGSYGT-DRLGRSGMTGVVDRKYWERF 323 Query: 320 GKILGWAWGAGFVDGIGQGME---RASQPAVGLGATAAYG------AGDVLKMGIGGGAS 370 G G I Q + R G+ + + D + + Sbjct: 324 GPPALMTLIGGATQYIAQLGQKPDRNITIINDSGSVTSIPQGNGDTSQDRARQIAAETIA 383 Query: 371 KAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 Q L + + P I I G+++ V Sbjct: 384 SGIQQLGTEAFQDSRNIRPTIHIPQGSDINVFVTRDLD 421 >UniRef50_Q11ZI3 Conjugation TrbI-like protein n=1 Tax=Polaromonas sp. JS666 RepID=Q11ZI3_POLSJ Length = 422 Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 50/415 (12%), Positives = 112/415 (26%), Gaps = 43/415 (10%) Query: 15 WLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEM 74 L + +G AIG + SDV GE +++ + + T D + Sbjct: 21 ILAFLGIGILLAIGCYSWYSDVSTPTKGEDASKKVTLQEATAAKDAGVKGDPKDVTAFAD 80 Query: 75 QVTAAQMQKQYEEIRRELDVLNKQ--------------------RGDDQRRIEKLGQDNA 114 + + + L + + +E + + Sbjct: 81 KAGVPAALRGDAAAKAPLPSASAPDTGVRPQPFPVDLGSPPASSKLGTAASLEAVRETEI 140 Query: 115 ALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYP 174 + A+ V + + P ++ E E + + Sbjct: 141 SNAKPV--VFDQALAPAQAPSEKLDPISQLIEQEKIAQARREAASAKAGDLSQVSGLLNS 198 Query: 175 GNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLI--EGADANA 232 P + + + + GS +A+ + +D Sbjct: 199 QRPQQAPAGRAADKSWLKEFAPSRKDPGLLPSLPEAPLMLTQGSVIEAVTLREINSDLPG 258 Query: 233 SVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDG 292 +T + + +P G + G ER + + L +G Sbjct: 259 VITARTTRDIYDSTTQRNLVLPKGTLA--IGEYSSDVRMGQ---ERLLFAFTRLV-LPNG 312 Query: 293 KTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGAT 352 ++ D+ G+ G+KG+V ++ G + G + + +T Sbjct: 313 QSFDLGSFNGGDAAGRAGVKGDVDNHYFRLFGTSLLIGLLA-------------DRVVST 359 Query: 353 AAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGF 407 A G + G + + ++R + P I I +G V + + Sbjct: 360 KAVPQGTNGQAGGLSATGQILTDTAKSILERNREVAPTISIPSGARVVIEVRRDM 414 >UniRef50_C6BQE4 Conjugation TrbI family protein n=1 Tax=Ralstonia pickettii 12D RepID=C6BQE4_RALP1 Length = 444 Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 70/429 (16%), Positives = 111/429 (25%), Gaps = 71/429 (16%) Query: 34 SDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELD 93 + G E +P P + D A E + + + + E Sbjct: 37 MFIKFGGGSTRNTEFKPTPVQAAQLGPAGDPTSIDKAKAEAEERVRLAKVREQADLTEAK 96 Query: 94 VLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGN 153 ++ Q R G +A ANP TA G+P +P P G G Sbjct: 97 RKQEELLAQQARQAANGGASATPPV---TPIANPATAGGQPNGALPPLPAGLAGTGSRPG 153 Query: 154 TPVSFPPQGSVAVPPP---TAFYPGNGVTPPPQVTYQSVPVPNRIQRKVF---------- 200 VS P + ++ P G + S P + QRK Sbjct: 154 RAVSDPDREAMIRNSPVLVKGAASGPNQAQGSGGSSLSPPELSDAQRKQIAGSFDMSSIL 213 Query: 201 ---------------------------------TRNEGKQGPSLPYIPSGSFAKAMLIEG 227 T P+ Y+ + + +A+ Sbjct: 214 KNIPGMQNGAAPGAGAAANAQWLSDYSSKAADHTVQTAYSPPAKYYLRANTLIQAVTTRA 273 Query: 228 ADANASVTGNESTVP-MQLRITGLVEMPNSKTYDATGCFVGLEAWGDV--SSERAIVRTR 284 +++ S + V + ITG + G + GD+ R V Sbjct: 274 INSDLSGPLEMNVVSDVYDTITGTQIL------IPAGSTISGGNNGDIRLGQSRIEVGIG 327 Query: 285 NISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQ 344 I C DG +D P G G+ G+V +I A + Sbjct: 328 RI-CRPDGICVDTPNSQGADSSGATGLTGDVNNHFLQIFATAIIPAAL--------AYVT 378 Query: 345 PAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQ 404 G+ Y G S + R P I + G V++V Sbjct: 379 SPKSAGSGNVYAGSGNPMNAAGQ----ILTQTSQQILNRYSNAPPTISVDPGTPVSIVLG 434 Query: 405 DGFQLKTVE 413 L Sbjct: 435 KDLVLPPFR 443 >UniRef50_A9HQ52 Putative conjugation TrbI-like protein n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HQ52_GLUDA Length = 390 Score = 76.5 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 79/302 (26%), Gaps = 22/302 (7%) Query: 120 VKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVT 179 + A G + E + + + T Sbjct: 109 LHAQGQGKAASGTEDHRAAQEVEAAIASRLFVQTGERDRASEQATPLAQGAPATQRQAST 168 Query: 180 PPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIE--GADANASVTGN 237 + + R + + S + +G+ L +D + G+ Sbjct: 169 TTGPQAGNLAFLEEQPDRATTSPDRIALPASPYILQAGTVIAGALNTKISSDLPGQIVGH 228 Query: 238 ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDM 297 + + +P T G + ++G +R + + DG+++ + Sbjct: 229 VTQNVYDSPTGRYLLIPQGST--LFGAYNSSISFGQ---QRIQIIWTRLI-FPDGESLVL 282 Query: 298 PIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGA 357 G++G+ EV G++ A + + + Sbjct: 283 EKLPGGDAIGQSGLSDEVDNHWGQLFKAALVTTLLSVGSEAGTSWN-------------- 328 Query: 358 GDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMAL 417 + L I GAS + + I R+ P + G TV+ LK Sbjct: 329 ENNLMQAIRSGASNGFSMVGNRLIDRSLNVQPTLTDRPGLPFTVILGPDLLLKPYRNGGN 388 Query: 418 ER 419 R Sbjct: 389 PR 390 >UniRef50_Q0FXR1 Type IV secretion system protein B10, putative n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXR1_9RHIZ Length = 449 Score = 74.9 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 44/377 (11%), Positives = 102/377 (27%), Gaps = 23/377 (6%) Query: 36 VDMSGNGETVAEQEPVPDMTGV--VDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELD 93 + + V + P D + + + + R + ++ ++ +LD Sbjct: 92 IQSEPAPDIVETEIPTVDPALMTEIASLKSELDRLRNAPKPVPDTSEQDAAIADLVAQLD 151 Query: 94 VLNKQRGDDQRRIEKLGQDNA-ALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPG 152 L + + Q +++ + L L + + E E + Sbjct: 152 NLRAESAEAQEELQRRLDERDRQLRRLSSELEMAQLQSGPTQTGPSEEDIRLAELERRRQ 211 Query: 153 NTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLP 212 + + + G+ Q + Sbjct: 212 EEAAFQDARDASDMIAFGGGSVGSESYGEDQRLSRDAAFVRSGAANAKVTQADVIANPSH 271 Query: 213 YIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 +P G+ +A L D++ G + + G + Sbjct: 272 TVPQGTLIQASLETALDSSLPGDIRAIVSENIHAFDGSRVL-IPRGSRLVGRYQSDI--- 327 Query: 273 DVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFV 332 D++ ER + I L +++ + G G+ G+ G+V + G A V Sbjct: 328 DLAQERVTIGWDRII-LPSNQSVQISAYGG-DQLGRAGVTGDVDKHFLERFGSAALLSIV 385 Query: 333 DGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIP 392 P++ + D ++ G T I + P I Sbjct: 386 SAG---------PSLATASLTDPDVADTVEDVGGDFGGSTRDT-----IDESLSIEPTIR 431 Query: 393 IGAGNEVTVVFQDGFQL 409 + G+ +TV+ ++ Sbjct: 432 VPQGSAITVMVDRDLEI 448 >UniRef50_A1VV08 Conjugation TrbI family protein n=39 Tax=cellular organisms RepID=A1VV08_POLNA Length = 439 Score = 74.9 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 75/301 (24%), Gaps = 22/301 (7%) Query: 118 EQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNG 177 ++K ++ + + +A P + Sbjct: 148 ARLKQAEEAAASSVFFRSGGQKVAAAAQPQALPVATALAANAAFDPMAAGPASTAAQSAD 207 Query: 178 VTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGSFAKAMLIEGA--DANASV 234 T Q ++ + Q + PY + +G+ A L+ G D V Sbjct: 208 PTAVQNRQDQKEAFLSKAGSTETRNSGSLQMSASPYQVMAGTVIAAALVTGIKSDLPGDV 267 Query: 235 TGNESTVPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGK 293 T P+ TG + P G + ++G R V + Sbjct: 268 IA-TVTEPVYDTATGKYVLIPQGSR--LLGKYNSQVSYGQ---SRVQVVWNRVILPDTSS 321 Query: 294 TIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATA 353 + G G G++ V ++ A + + ++ Sbjct: 322 FQLDKLIGT-DPAGYAGLEDGVDWHWDRVFAGAALTTLLGIGAELAAPENR--------- 371 Query: 354 AYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 GD + + + +R P + G V V+ L+ + Sbjct: 372 --NGGDRVIIAGRDSLKDSVNQAGQEMTRRNMNMQPTLTERPGLPVRVIVNRDLVLRPYQ 429 Query: 414 E 414 Sbjct: 430 P 430 >UniRef50_D2W236 FH2 domain-containing protein n=2 Tax=Naegleria gruberi RepID=D2W236_NAEGR Length = 2131 Score = 74.2 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 28/205 (13%) Query: 38 MSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNK 97 + E ++ E V D+ +++ + + ++ +QKQ + I ++ L Sbjct: 383 IKAVSEKISSLEWVNDIKIILEGS-------ESVNLLKDRNLSLQKQVDTITKDNAQLKD 435 Query: 98 QRGDDQRRIEKLGQ-------DNAALAEQVKALGANPVTATGEPVPQMPASPPGPEG--- 147 Q + RIE L + A+ QV L ++ + + + + P Sbjct: 436 QMEKLKVRIEALEKAPPTVIVKKVAVVRQVGELKSSGSGSNLAGLVESNSPTTSPPNIFP 495 Query: 148 -----------EPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQ 196 P P + V PP G V PP + PP ++ P P Sbjct: 496 DDTVPSCNSSVPPPPQASSVVPPPPGMGGVVPPPPIGSSSVPLPPMTISSSVPPPPVGFN 555 Query: 197 RKVFTRNEGKQGPSLPYIPSGSFAK 221 V + P + +P S Sbjct: 556 SSVPPSSSIPLPPVMGTVPPNSAIP 580 >UniRef50_A8LT13 Conjugation TrbI family protein n=16 Tax=Rhodobacterales RepID=A8LT13_DINSH Length = 459 Score = 73.4 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 59/458 (12%), Positives = 112/458 (24%), Gaps = 79/458 (17%) Query: 7 IVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQE---------------PV 51 I +++ L ++V+ A G LYL A + P Sbjct: 25 IAAQRRSPLLALIVILVIGAGGALLYLLSQPDEEEALPTATPDVFQNEGDGFGAIETLPP 84 Query: 52 PDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKL-- 109 P+ V F E+ +Q Q EE+R + + ++ I+ L Sbjct: 85 PEPEVV----FVAPDPVEPNVELLAQITALQAQIEELRNAPEAVVEEDTAAAEAIDALTA 140 Query: 110 ----------------GQDNAALAEQVKALG-----ANPVTATGEPVPQMPASPPGPEGE 148 + A ++ L A + +P P P E Sbjct: 141 QIAALQAASEAAQQRFQDELTARDRSLEQLRMDLELAQLEASRPQPAPTGPTEDELRARE 200 Query: 149 PQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRK---------- 198 + + P + + N Sbjct: 201 QERLRREEEARRMAELERRAAEERAFQERRITSPTIAFGGASGANETALTERTFGEVTDF 260 Query: 199 -------VFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLV 251 I G+ +A++ D++ + G+ Sbjct: 261 VLNGALPSTVTQAEVIANPSNTIIQGTMIQAVMETALDSSLPGQTRAVVSEDVYSVDGVR 320 Query: 252 EMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGI 311 + + G + D++ R + I L G+T+ + G G++G+ Sbjct: 321 LL-IPRGSRLIGRYRAGV---DIAQRRVTIAWDRII-LPAGQTVQISSFGG-DELGRSGV 374 Query: 312 KGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASK 371 G + R + G A + D Sbjct: 375 TGLIDTRFAERFGSAALISLISAAPGAAAS--------------EVQDETAADALEDVGD 420 Query: 372 AAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 +D I PVI + G VTV+ ++ Sbjct: 421 DLADATDSVIGDYLSIGPVIYVDQGARVTVMVDRDLEI 458 >UniRef50_Q5NV40 Conjugation TrbI-like protein n=6 Tax=Burkholderiaceae RepID=Q5NV40_RALME Length = 414 Score = 72.6 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 61/412 (14%), Positives = 110/412 (26%), Gaps = 23/412 (5%) Query: 8 VKRKQYLWLGIVVVGTASAIGGAL-YLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKV 66 VK K + + + G A+ + GAL Y + A+Q ++ + + Sbjct: 21 VKGKLPRNVVLALGGAAALMVGALGYYFQTVSDEQIDAKAQQARADEIKQRAGSADTGQS 80 Query: 67 RQHATTEMQVTAAQMQKQYEEIRRELDVLN--KQRGDDQRRIEKLGQDNAALAEQVKALG 124 A + ++ ++ D GD + G A L Sbjct: 81 LDAVIRAQADKAREESEKQRKLAIATDTKAPVMTAGDLTSAAKATGAAPDAKKNAEDDLF 140 Query: 125 ANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQV 184 + V +G Q+ + Q A PQ Sbjct: 141 TSSVFKSGTRKSQVAQVKQPSGMPDVTDPAQMRAIQQAVAAKAAAANAAGATPEGVAPQA 200 Query: 185 TYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGN-ESTVPM 243 + R + G A G +++ + + Sbjct: 201 SSSDRQFLRDAGSLNTLRTGFDGKLPRCTLSRGFVIPANFAGGLNSDKPGEFRATVSQDV 260 Query: 244 QLRITGL-VEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGH 302 + G +P T G + A G ER + + L +GKT+ + Sbjct: 261 YDTVKGTCKIIPAGTT--LVGMYSADIAVGQ---ERILTAFVRM-QLPNGKTVPLMGMQG 314 Query: 303 VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLK 362 G G G+V KI G A G + + P G Sbjct: 315 ADPDGTAGNTGDVNNHFLKIFGGALVIGALS-----LRFNDNPT-------TTTVGPSGL 362 Query: 363 MGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEE 414 + G A + A + + R + P I G ++ V + L+ + Sbjct: 363 VAYGNAAGQVATQTAQTILNRNQNIRPTITTEPGQKMMVQVKHDIVLEPYRD 414 >UniRef50_A1WSV0 Conjugation TrbI family protein n=2 Tax=Proteobacteria RepID=A1WSV0_VEREI Length = 450 Score = 69.9 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 63/442 (14%), Positives = 121/442 (27%), Gaps = 53/442 (11%) Query: 1 MASINTIVKRKQYL----WLGIVVVGTASAIGGALYL-----SDVDMSGNGETVAEQEPV 51 + + K K + LG+V+VG + G L+ ++ + +T + Sbjct: 23 LGEPTSKAKSKTNVGKFAILGLVLVGFLFIVAGLLFYQKHKRANATVETPAKTAPVKPEF 82 Query: 52 PDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRREL----------------DVL 95 V++ +K + + + AQ++ E + Sbjct: 83 ASKNAAVESDLIEKAKAEIKKKEEEDQAQIKAVEEAQAQAKAQAAAEAAKRGQGGFGQAD 142 Query: 96 NKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTP 155 +QRG + + + A E E Q Sbjct: 143 GQQRGGQYSGGQAQQGNQPPPPPTPMERKMAGGVLLDSKGAKPKADAQLSEKEQQQREVQ 202 Query: 156 VSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYI- 214 G P + + R+Q V + P+L Y+ Sbjct: 203 ARMAAAGVTPGGGQGFNGGTGLQLAPGGQGGGADGLAARLQPTVLQARWAGKLPNLDYLL 262 Query: 215 PSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDV 274 G+ L G D + ++ V N K G + +G+ Sbjct: 263 KRGTTIPCALKTGIDT-------TLPGFVICKVLNNVYSANGKVLLVER---GADVFGEQ 312 Query: 275 SS------ERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWG 328 S ER V I +G ++ G +GI G V + G A Sbjct: 313 QSQLKQGQERTFVVWTRID-NPNGVFANIDSPAT-DQMGYSGIPGYVDTHFWQRFGGAIM 370 Query: 329 AGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYH 388 + Q + + GATAA + ++A Q ++ ++ + Sbjct: 371 LSLIKDFSQAYSQRVANSSNTGATAAQPYSN---------TNQATQDMAAEALRNSINIP 421 Query: 389 PVIPIGAGNEVTVVFQDGFQLK 410 P + + V V+ + Sbjct: 422 PTLVVLPATIVNVMVARDVSFE 443 >UniRef50_P17800 Protein virB10 n=16 Tax=Rhizobiales RepID=VIRBA_AGRT5 Length = 377 Score = 69.5 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 72/296 (24%), Gaps = 29/296 (9%) Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPP 181 L +P PA EP+P TP+ G + Sbjct: 81 TLDPPAAQEAVQPTAPPPARSEPERHEPRPEETPIFAYTSGDQGTSKRVQQGETDRRREG 140 Query: 182 PQVTYQSVPVPNRIQRKVF--TRNEGKQGPSLPYIP-------SGSFAKAMLIEGADANA 232 V + + + Q +P G+ +L D + Sbjct: 141 NGEDSPLPKVEVSAENDLSIRMKPTELQPTRATLLPHPDFMVTEGTIIPCILQTAIDTSL 200 Query: 233 SVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDG 292 + +P +R T + + G GD R V Sbjct: 201 AGYVKC-VLPWDVRGTTNNVVLLDRGTTVVGEIQRGLQQGDA---RVFVLWDR--AETPD 254 Query: 293 KTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGAT 352 + G++G+ G V + A V G + AS A G Sbjct: 255 HAMISLASPSADELGRSGLPGTVDNHFWQRFSGAMLLSVVQG---AFQAASTYAGSSGGG 311 Query: 353 AAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 ++ + + +D +K P + G+ V++ Sbjct: 312 TSFNS-----------VQNNGEQTADTALKATINIPPTLKKNQGDTVSIFVARDLD 356 >UniRef50_B9JPS7 Type IV secretion protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JPS7_AGRRK Length = 427 Score = 69.2 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 73/265 (27%), Gaps = 10/265 (3%) Query: 172 FYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADAN 231 G V + + V T + IP G + +L ++ Sbjct: 168 AGSGGSANASADEDPDRRFVQSVGSQDVETVTASRNDRIDALIPQGVLIRGVLETAIQSD 227 Query: 232 ASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD 291 G + SK TG + A G R ++ + D Sbjct: 228 LPGMVRAVISTDVYSFDGRRVLL-SKGTMLTGEYKSGMARGQT---RILIVWTR-ALRSD 282 Query: 292 GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGA 351 G ++ + G G++G+ G V + G A V GI + + Sbjct: 283 GTSVALGSYGT-DDLGRSGLAGFVDKHYLERFGAAAVLSMVGGISSFVA-GLNSDGSSSS 340 Query: 352 TAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ--- 408 ++ + S+ +++ +K + P I + G ++ V + Sbjct: 341 GSSSSTSSDAQTQAQQTLSQTMAEMANIALKDSINIPPTIYVDQGTQIMVFVRKDLDFSS 400 Query: 409 LKTVEEMALERTQSRAEEDNPESPV 433 L RA N S Sbjct: 401 LYPDPVKEAVNELRRARIRNAPSTS 425 >UniRef50_D1UHI4 Conjugation TrbI family protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UHI4_9BURK Length = 447 Score = 69.2 bits (167), Expect = 4e-10, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 84/336 (25%), Gaps = 25/336 (7%) Query: 87 EIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPE 146 + + R QR+IE + + E + + Sbjct: 129 TSSQSAANRDADRLALQRQIEAMQSQSLVAYEDTTRDTQDASGQNPNAQDPDRIAGSMAN 188 Query: 147 GEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGK 206 QP ++ + P + K + Sbjct: 189 LYTQPAHSSSASTASAVETERAPMQQAGVASGIDRRNADWLKQQGDPADDEKPLVPVPLR 248 Query: 207 QGPSLPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGC 264 + G+ ++++GA D + +P G Sbjct: 249 SPYMVI---GGTSIPTVILQGAKSDMPGTFRAMVDRDIYDSIDGSCKLIPKGTRM--LGR 303 Query: 265 FVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFR--GKNGIKGEVVMRNGKI 322 A G + ++ + + M + G G+ G+ +V +I Sbjct: 304 TNNDVAIGQ---DLMLMAATRMIF----RHATMRLDGLSGNDPDGEAGVSADVNNHFFRI 356 Query: 323 LGWAWG-AGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYI 381 G + AG IG +++ + + A + A+++ + + Sbjct: 357 FGSTFLIAGVAAWIGHNQSQSNGTTINVNGGVASD--------LSSAAAQSLSQTTQTIL 408 Query: 382 KRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMAL 417 +R P + + G VT + Q L Sbjct: 409 QRNMNIQPTLRLEPGQRVTFITQRDMMLPPGATDGS 444 >UniRef50_A9M4S9 Hypothetical conjugal transfer protein n=1 Tax=Vibrio sp. 23023 RepID=A9M4S9_9VIBR Length = 405 Score = 68.8 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 59/415 (14%), Positives = 116/415 (27%), Gaps = 24/415 (5%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTT 61 AS K+ + V + TA + + + + +P + Sbjct: 5 ASPPLTKKKLTVYLMASVGLITAVLFVMTVIDMANRKATPTDITPTEASLPQEQSAQKPS 64 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAE--Q 119 +++ + + + + + + ++++L + + AL + Sbjct: 65 DIEQLVDEKMKVSSPELSNAKGNDQHLASTDEDEAIATLKTKMKLKELERASLALHSTWR 124 Query: 120 VKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVT 179 + P TA E + Q A+ F + Sbjct: 125 QENAPPAPTTAPPPSPSTSEQQLQTLEARRMETQRRIEQVTQLKEAIESQGGFSIDSKKL 184 Query: 180 PPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNES 239 Q + P K N +P G+ A+ + ++ + T Sbjct: 185 ASLQKQFTPPPHDVVGYTKSNAYNADI--TGKMVLPIGTVIPALTTTKSVSDYAGTFKGI 242 Query: 240 TVPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMP 298 + + P V +V ER + + I L +G IDM Sbjct: 243 VAQDIYDVNYQYVLIPKGSEVIMKSMKVSNVN--EVIQERMGIMVQWIV-LPNGTKIDMS 299 Query: 299 IKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAG 358 + G IK +V A F+ + +S G GA Sbjct: 300 KASGLDREGVGAIKDQVNRH--------LMAQFMGVAAYALLSSSTSYEGSGA----NND 347 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 + IG G + A+ L+ Y+ P I I AG + ++ D L + Sbjct: 348 NSYVGDIGNGVREQAKPLAKQYLNL----RPTITIRAGQSMNIITGDDIYLSPWK 398 >UniRef50_A1VV44 Conjugation TrbI family protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VV44_POLNA Length = 432 Score = 67.6 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 48/403 (11%), Positives = 107/403 (26%), Gaps = 22/403 (5%) Query: 11 KQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHA 70 + LGIV+VG +A+ G + + + E + + Q Sbjct: 49 RNLKKLGIVLVG--AAVAGYMLYPSLFPPSKEKKTVVVEKSDAHQETPGSIIEQLKSQPK 106 Query: 71 TTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTA 130 V + Q N + + +T Sbjct: 107 PPPPTVEVSVPPPQVHPTPPAGMSNNPDGASVLTPRQIEANRRETIMASAMEPSDINITL 166 Query: 131 TGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVP 190 +P + + GP+ + + S+A P P + + Q Sbjct: 167 RDQPRKKADSEADGPDSALARALAQQNGILEKSLAQP-------VEKPQPLAKGSNQDEF 219 Query: 191 VPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGL 250 + + + + + G+ + +L + + T Sbjct: 220 LLRTRNASLEEATKLAPARAAAALYQGTIVQVILDRAINTDNPGTARGRVRSDVYDSVTQ 279 Query: 251 VEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNG 310 + + ++ GD R +V + +GK++ + +G +G Sbjct: 280 SILLIPRGSLVILPYLNSMLVGD---SRILVAGERLI-FPNGKSMSLSGTPAADMQGASG 335 Query: 311 IKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGAS 370 I +V ++ ++ G + SQ V + + G +G Sbjct: 336 IPADVDNHFYEMFKTSFMVGA----ASLLLPKSQQNVSI-SDTVSGGSRTGGSILGTTLY 390 Query: 371 KAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 + +S R P I G T++ +L+ Sbjct: 391 DTIKQIS----ARNASIRPTGSIEVGEPFTLMLSKDIELEPYR 429 >UniRef50_C6RJZ0 VirB10 protein n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RJZ0_ACIRA Length = 450 Score = 67.6 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 62/424 (14%), Positives = 119/424 (28%), Gaps = 49/424 (11%) Query: 10 RKQYLWLGIVVVGTASAIGGALYLSDVDMSGN----GETVAEQEPVPDMTGVVDT----T 61 + + + +G+++ + A+Y + G A +PV ++ G + Sbjct: 50 KAKLIKVGVILFVVIGLVISAVYFKLQKNKESRLESGVETAVAKPVTNIEGTGLSEDRFG 109 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVK 121 F A TE +K E++ E + +Q+ + + Q A + Sbjct: 110 FGGPQPIPALTEPNPLPTANEKSPEQLEMERQLAAQQQQLAMEQEQARQQAIAQQQALLN 169 Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPP 181 A + + TG+ SP G+ G P P S+ N Sbjct: 170 ARYKSGIMVTGQSQSNSGISPNNAAGDM-AGVPPELMPLFMSMQSSQANNNGGANTSNVN 228 Query: 182 PQVTYQSVPV------PNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANAS 233 P++ S + +K + I G A+L D ++ Sbjct: 229 PRIANNSASSMGGRFDSSTTNQKAPIAHASYNADRRLLIQQGKIVDAVLETAVKSDLPSN 288 Query: 234 VTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSS------ERAIVRTRNIS 287 + T + +P +G SS Sbjct: 289 IIARV-TTDIYGEQGRNRLLPAGTRL-----------FGQYSSIVNDGQAEVAAVWNRAI 336 Query: 288 CLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAV 347 +G I + G G+ G+V G+I G A + V Sbjct: 337 -TPNGVEIMLDSPSTNGL-GVAGLGGKVNNHYGRIFGTATLLSVIGAG--------VSNV 386 Query: 348 GLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGF 407 G+ ++ A + + A + ++R P I + G + V+ Sbjct: 387 GVSSSDQNNASQAYRTEVANSFGNQADRV----LQRNLSIPPTITVPHGTRIKVLVAKDL 442 Query: 408 QLKT 411 T Sbjct: 443 DFST 446 >UniRef50_Q120E4 Conjugation TrbI-like protein n=1 Tax=Polaromonas sp. JS666 RepID=Q120E4_POLSJ Length = 483 Score = 67.2 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 40/320 (12%), Positives = 89/320 (27%), Gaps = 27/320 (8%) Query: 98 QRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVS 157 + R + L D + + + + TG P + + P + ++ Sbjct: 172 EIEAQVRGAKALAFDESQASSAIAQGAQGSIVQTGLPASGVNVAQRSLAALPDLVSAGIT 231 Query: 158 FPPQGSVAVPPPTAFYPGNGVTPPPQVTYQS---------VPVPNRIQRKVFTRNEGKQG 208 P +V G Q + ++ + Sbjct: 232 QAPSATVQTSMDRMLGNLRGAQGGISARAQGGGSGNAAWVNDYASGTGQRSSETIKSYPT 291 Query: 209 PSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGL 268 S + G A+L +++ V G + K G + Sbjct: 292 SSAYTLHQGKVIPAVLGRQINSDLPGEITAYVVTNVYDSLGNGALLIPKGSVLAGRYNSE 351 Query: 269 EAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWG 328 G ER + + + +G++ D+P G +GI G+V K+ ++ Sbjct: 352 VKPGQ---ERVLFAFNRLI-MPNGQSFDLPGAQGSDLAGASGISGDVNNHFFKMFSASFF 407 Query: 329 AGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYH 388 ++ + + + G+T + A + +S + R Sbjct: 408 TAWL---ADRVTPQTTTSGVGGSTTSVSP-----------AGQVLVDVSKAILDRNRTIP 453 Query: 389 PVIPIGAGNEVTVVFQDGFQ 408 P I + G + V + + Sbjct: 454 PTITVDQGTRINVEVKKDME 473 >UniRef50_A3U3E8 Type IV secretion system protein B10, putative n=9 Tax=Rhodobacterales RepID=A3U3E8_9RHOB Length = 480 Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 45/351 (12%), Positives = 96/351 (27%), Gaps = 35/351 (9%) Query: 68 QHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANP 127 ++ A + + ++R+ + Q ++ L ++ G Sbjct: 149 DEQKAALEAMLAAKETELANLQRQ---TESRIAGLQAMLDAERAQREGLESELDREGLIA 205 Query: 128 VTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQ 187 E + E E + +V P Sbjct: 206 DQRLLEERRRQEEEQRQREAERVAEELLTAQIKSPAVVYADGPRGGQSGAAVADPAAAGT 265 Query: 188 SVPVPNRIQRKVFTRNEGKQGP------SLPYIPSGSFAKAMLIEGA--DANASVTGN-E 238 PV + ++ + T + + GS +A L D SV Sbjct: 266 GGPVLSGNEQFLQTARPLEVQEAARLAYPERTLTQGSVIQAALQTAINSDLPGSVVAVVS 325 Query: 239 STVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMP 298 VP + +P G + D+ +R ++ + DG ++++ Sbjct: 326 EPVPAF--SGDQILIPRGSR--LFGQYRSGI---DMHQKRILIVWTRV-LTPDGTSMEIA 377 Query: 299 IKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAG 358 G G++G+ G V + + G A + + ++ Sbjct: 378 AVGG-DQLGRSGLTGLVDTKFAERFGGAALISVIGAAPAVVAESANN----------ETT 426 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 ++ G+G A ++ I P I + G VTV+ + Sbjct: 427 SIVLGGVGSDLQDAVGSV----IADQVSIAPTIYVDQGASVTVLVDRDVVI 473 >UniRef50_B6JK51 Conjugal transfer protein n=3 Tax=Rhizobiales RepID=B6JK51_OLICO Length = 449 Score = 66.5 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 33/278 (11%), Positives = 69/278 (24%), Gaps = 28/278 (10%) Query: 173 YPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANA 232 G+ P+ + + V K + G+ + +L ++ Sbjct: 171 DDGSKAAAGPEDDPNRRFLSSVSAAGVEVSRAIKNNRIDALVAQGTMIRGVLETAVQSDL 230 Query: 233 SVTGNESTVPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD 291 G + P G + A G R V + D Sbjct: 231 PGMVRAVVTENVWSFDGRRVLIPAGSR--LVGEYKSGIAQGQT---RVFVVWTRM-LRSD 284 Query: 292 GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGA 351 G ++ + G G+ G G V + G A V G Q + Q +G Sbjct: 285 GVSVQLGSNGT-DDLGRAGNAGFVDNHYLERFGSAIMLSVVGGAAQFLSAYGQNTNTIGN 343 Query: 352 TAAYGAGD--------------------VLKMGIGGGASKAAQTLSDYYIKRAEQYHPVI 391 + D + S+ ++ ++ + P I Sbjct: 344 GSIIMTTDPVTGIVTQTQTGVNQNQLSLQAREIAAQNVSQTLTNIAQQALRNSINIPPTI 403 Query: 392 PIGAGNEVTVVFQDGFQLKTVEEMALERTQSRAEEDNP 429 + G + V + + ++ + + Sbjct: 404 YLDQGTRIIVFVRRDLDFSALYPDPVKEALRELKRERA 441 >UniRef50_A5PCI8 Conjugation TrbI-like protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCI8_9SPHN Length = 341 Score = 66.1 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 83/296 (28%), Gaps = 26/296 (8%) Query: 121 KALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQG-SVAVPPPTAFYPGNGVT 179 A G + + +P P + V P+ + PP V Sbjct: 66 AATGEHGDAPGAAAMSDDTHAPDAEPVAPPATSQTVPPDPRPFQLRGDPPRVMRLSRKVL 125 Query: 180 PPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGAD-ANASVTGNE 238 V + I + + S S ++A+ D A+ G Sbjct: 126 AVVGVVAGLGIGGSLIYALLPAEERASEELYNTE--SRSQSEAVTSGPRDYADVPQLGPP 183 Query: 239 STVPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDM 297 T + TG + + P G + A G R ++ + + G +I + Sbjct: 184 LTANVYDSPTGRILLVPQGAR--PIGEYDSEIAAGQT---RVLLAWNRLI-MPGGLSIIL 237 Query: 298 PIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGA 357 + G G++ V R G +L A + + +GA Sbjct: 238 ERQLAADAAGFAGLQDRVDQRRGNLLRAAAVSTLLG---------------VGAELGADG 282 Query: 358 GDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 D L + G + R P + I G+ + V+ L+ V Sbjct: 283 EDDLVRALRRGPQSTINQAGQRIVDRQLNVQPTLTIRPGHPLRVILTRDLILEPVG 338 >UniRef50_D1ATB8 Type IV secretion system protein VirB10 n=6 Tax=Anaplasma RepID=D1ATB8_ANACI Length = 445 Score = 65.3 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 57/422 (13%), Positives = 107/422 (25%), Gaps = 47/422 (11%) Query: 18 IVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVT 77 + VV AI G Y SG E + V++ DK+ + + Q T Sbjct: 30 LFVVLVVCAITGMAYYMFFRSSG------TTEKSEEPQAVIEKQDVDKLLKESEAPAQET 83 Query: 78 AAQMQK-----------------QYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQ- 119 A ++ + + + ++ + E L + E Sbjct: 84 APRILTPPPKLPDLPPLVMPTAPELPTLTKITKKRKEEPVATEETKEILPPAVESFFEPE 143 Query: 120 -VKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGV 178 + P+P P PE P + + + Sbjct: 144 LQRHPQEEDRMPQHIPMPYRPGGGGIPEPMPSFLGYDREKRGTPMIVLGGGGGESGTSED 203 Query: 179 TPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNE 238 + + + G I G A+L +++ Sbjct: 204 GGGQGSDSRFRTWGTLDGTSSPSVKATRVGDPGYVILQGHMIDAVLETAINSDIPGVLRA 263 Query: 239 S-TVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSE--RAIVRTRNISCLKDGKTI 295 + + +V +P + D S R V + L G I Sbjct: 264 IVSRDVYAEAGNMVMIPKGSRL-------IGSYFFDASGNNTRVTVSWARVI-LPHGIDI 315 Query: 296 DMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWG-AGFVDGIG---------QGMERASQP 345 + G G+NG G V + G +L AG G Q + + Sbjct: 316 QINSAGT-DELGRNGSAGFVDTKMGSVLTSTILLAGVSMGTAFVTSKIPALQSEIKDTTE 374 Query: 346 AVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQD 405 G + + + ++++ K A+ P I + G + V Sbjct: 375 EKGGEKKKEEKSSTLPVKIVSDAVKDFSESMKSLIKKYADANKPTIYVDQGTVMKVFVNQ 434 Query: 406 GF 407 Sbjct: 435 DI 436 >UniRef50_C6BRC6 Conjugation TrbI family protein n=2 Tax=Ralstonia pickettii RepID=C6BRC6_RALP1 Length = 447 Score = 65.3 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 98/324 (30%), Gaps = 20/324 (6%) Query: 100 GDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTP-VSF 158 + + +++ Q+ +A A+ P + P + Sbjct: 135 PEQRLALQRASQETDTMAVVSYGDREQGAAASAGTNPISDYIASLQRQQADKRTAPGEAG 194 Query: 159 PPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSG 217 P + A + TP + V + + + Q P+ + G Sbjct: 195 TPAIQAQLAALAAANSQSQNTPGSATNARHVAWQGQQTNQGQSATLTPQAAESPFMVMPG 254 Query: 218 SFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSK-TYDATGCFVGLEAWGD--V 274 + +L +G +++ + + I + N A G + + D + Sbjct: 255 TPIPVVLNQGVNSDMPGQYSA---TVDRDIYDSI---NGSCRLIAKGTRIVGASNSDVAI 308 Query: 275 SSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWG-AGFVD 333 ER + + ++G ++ + G+ G+ +V KI G + AG Sbjct: 309 GQERMQM-GAALMIFRNGASMVLDGLNGADPNGEAGVSADVNNHFFKIFGSTFLIAGIAQ 367 Query: 334 GIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPI 393 IG+ + + + + G+ A +A + ++R P + + Sbjct: 368 YIGRNQSQPTGTTLNINGGG-------GATGLTSAAGQAVSQTTQTILQRNSNIQPTLRL 420 Query: 394 GAGNEVTVVFQDGFQLKTVEEMAL 417 G ++ + + ++ Sbjct: 421 DPGQKLVFITKAPIRIPPNTVAGE 444 >UniRef50_B5ERV7 Conjugation TrbI family protein n=2 Tax=Acidithiobacillus ferrooxidans ATCC 53993 RepID=B5ERV7_ACIF5 Length = 486 Score = 64.5 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 61/354 (17%), Positives = 93/354 (26%), Gaps = 23/354 (6%) Query: 110 GQDNAALAEQVKALGANPVTATGEPVPQMPA----------SPPGPEGEPQPGNTPVSFP 159 +A A A ++P A VP+ + G Sbjct: 140 SDTSATAATNSDADQSHPAKAPASTVPKKNPYATQDAAFASALGTGSAGSGAGEGLAWKT 199 Query: 160 PQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPY-IPSGS 218 P+ + + PT P + + K T + PY I SGS Sbjct: 200 PESTPSAQTPTVLPTALPGASLPGASLPDAEPSAAKKTKKKTPPSLVTRETSPYEILSGS 259 Query: 219 FAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSER 278 A+L G + + G + A G R Sbjct: 260 VIPAVLQTGIKSYLPGEITAVVSQNVYSSVNGATLLIPAGAKLVGTYDTQTALG---INR 316 Query: 279 AIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQG 338 V I +G T+++P G G GEV I A VD G Sbjct: 317 LAVAWTRIE-FPNGTTMNLPGYEGAGGAGYAGFAGEVNDHTWLIFKNALLMSIVDA-GMA 374 Query: 339 MERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNE 398 + S G + A + + +A L + YI A P I I G Sbjct: 375 IASPSTSTSVTGQMSGNVALQDSEQALAQTFGEAESQLLEKYIDIA----PTITIPTGYL 430 Query: 399 VTVVFQDGFQLKTVEEMALERTQS---RAEEDNPESPVPVPPSAESHLNGFNTD 449 +VV + A++ + +A N P G + Sbjct: 431 FSVVVAHDMVFPGPYDPAMQTGSAMVDQALGPNLNPYGLRPAKGLRPAKGLHPA 484 >UniRef50_B4U0L4 Emm-like cell surface protein CspZ.2 n=2 Tax=Streptococcus equi subsp. zooepidemicus MGCS10565 RepID=B4U0L4_STREM Length = 626 Score = 64.5 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 69/196 (35%), Gaps = 14/196 (7%) Query: 33 LSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRREL 92 LS S + Q + + + Q T ++ A +QKQ + I ++L Sbjct: 416 LSSTLESTKAQLSETQAKLSEAQKQLTAA------QEKLTTLEAEKAALQKQVDTISKQL 469 Query: 93 ----DVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGE 148 D+ K++ Q +I KL + ++++AL + G+ P+ P PE + Sbjct: 470 SEARDLSEKEKAALQEQINKLKAEIEQKTKEIEALKQGMQSHQGQEKPKDP---KTPETQ 526 Query: 149 PQPGNTPVSFPPQGSVAVPPPTAFY-PGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQ 207 P P+ + P P +TP + P + + KQ Sbjct: 527 KAPKVPEDPKAPEKNDQPQAPEKRSVPWTALTPAKPIDTTKAPKNSAPSSQTGAATPKKQ 586 Query: 208 GPSLPYIPSGSFAKAM 223 P+ + SF A Sbjct: 587 LPATGDTATPSFFTAA 602 >UniRef50_A3W6C8 Type IV secretion system protein B10, putative n=1 Tax=Roseovarius sp. 217 RepID=A3W6C8_9RHOB Length = 461 Score = 63.4 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 47/383 (12%), Positives = 108/383 (28%), Gaps = 36/383 (9%) Query: 37 DMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLN 96 + + E + + + T + ++ +E+ V + Sbjct: 102 EAPAPDNSAELAEALRSVQEQNTALIAQMQSEMDTRLAEADLEAQKRLADEVAARARVAD 161 Query: 97 KQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPV 156 + ++ L + N AL +Q+ ++ A + + + Sbjct: 162 GRMEQLMEQMLGLQRQNDALQQQIDDGMSD---ALRAQTERDQLAAEEAARRAELDRRRA 218 Query: 157 SFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQ--------- 207 + + + G T P + P + F + Sbjct: 219 EAAALRNTQIRSEGVIFDAGGQTGSPASDPERGPAVGDAAARAFVLDGALPVQVATAEVI 278 Query: 208 GPSLPYIPSGSFAKAMLIEGAD--ANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCF 265 + G+ +A L + +T + P+ V +P G + Sbjct: 279 ANPSNTVLQGTLIQASLETAIESTLPGQITAIVN-YPVWSFDQSRVLIPEGSR--LFGTY 335 Query: 266 VGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGW 325 + G R +V I +G+++ + G +G++G+ G V R G G Sbjct: 336 NSNVSLGQA---RILVGWSRIV-TPEGQSVQLAAFG-ADDQGRSGVTGSVNSRFGLRFGT 390 Query: 326 AWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAE 385 A + PA+ ++ ++ + G +D I Sbjct: 391 AALLSIIGAG---------PAIAASEASSETGSEIAEDVAGS-----FTQTTDAVIGEYA 436 Query: 386 QYHPVIPIGAGNEVTVVFQDGFQ 408 PVI + G ++V+ + Sbjct: 437 TLPPVISVQPGAAISVIVDRDLE 459 >UniRef50_Q49KE9 TraF n=1 Tax=Pseudomonas putida RepID=Q49KE9_PSEPU Length = 385 Score = 63.0 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 41/334 (12%), Positives = 82/334 (24%), Gaps = 21/334 (6%) Query: 79 AQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQM 138 Q++ E N + + + + + + P Sbjct: 58 KLQQQEQAEKASPNKARNLPGVSFATTPANAEDEPVEQSAEQEQAASTYQQPVQQTQPGQ 117 Query: 139 PASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRK 198 + + + A P Q + S + R+ Sbjct: 118 QGKVELTPEQKAMQRRLSASSGTEEMRSQGAVATPSRGEKAEPVQTSSGSSELATRMNSA 177 Query: 199 VFTRNEGKQ-GPSLPYIPSGSFAKAMLIEGAD--ANASVTGNESTVPMQLRITGLVEMPN 255 +T + I +G+ I D V+ S +R + Sbjct: 178 RYTASRATLMKNMSMSIAAGTMINCGTITELDTTVPGFVSCQVSKE---VRSADGSVVLI 234 Query: 256 SKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEV 315 K TG G G RA V + +DG + G + G GI G+V Sbjct: 235 DKGAKITGEVSGGILMGQA---RAFVLWSRVR-NRDGAVAYLDAPGT-NRLGSAGIPGQV 289 Query: 316 VMRNGKILGWAWGAGFVDGIGQGM-ERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQ 374 G A + +G+ + + + S + Sbjct: 290 DTHFWDRFGGAMFISVFSDLSRGLIQALVNSTDKSDSDTTVNLDN---------TSNTSD 340 Query: 375 TLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 +L+ ++ P + + G V++ Sbjct: 341 SLAREVLRATINIPPTLTVNHGEAVSIFVPRDVD 374 >UniRef50_C8S1Z6 Conjugation TrbI family protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S1Z6_9RHOB Length = 439 Score = 63.0 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 55/439 (12%), Positives = 116/439 (26%), Gaps = 56/439 (12%) Query: 4 INTIVKRKQYLW---LGIVVVGTASAIGGALYL-------------------SDVDMSGN 41 + KR++ + L V +G L L D +G Sbjct: 19 PSEAPKRRRGINPYALSAVTAVAGVGVGAWLVLAAPDAPAPAPAIETASVSDFQGDGTGT 78 Query: 42 GETVAEQEPVPDMTGVVDTTFDDKVRQH--ATTEMQVTAAQM------QKQYEEIRRELD 93 + + DT+ ++++ A + +++ ++ Sbjct: 79 DGFSVSRPKPQIVPAAPDTSEAERLQAEIEALNAQIADLKANPVTVTDEAALADLKAQVA 138 Query: 94 VLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGN 153 L+ + L ++N L +++ + E E + N Sbjct: 139 ALDADAKARAAALSDLERENIRLQTELETKMLIDGDSEAEAARAREEELARRRQEAEMLN 198 Query: 154 TPVSFPPQGSVAVPPPTAFYPGNGVTPP--PQVTYQSVPVPNRIQRKVFTRNEGK-QGPS 210 ++ G P P R+ K + + Sbjct: 199 EAQIHSDMVALRSSMDMGGEAGTAGPAPGAPGQAATGDDAFRRVGAKAADVRQAEVIADP 258 Query: 211 LPYIPSGSFAKAMLIEGA--DANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGL 268 + G+ +A L D +V+ S + V +P G + Sbjct: 259 AHTVMQGTLIEAALETAISTDLAGNVSAIVSHDVWSFDM-SRVLIPRGSR--LFGRYDSE 315 Query: 269 EAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWG 328 G R ++ + DG+++ + G G++G+ G V + G A Sbjct: 316 VDAGQ---RRVLIAWDRLV-TTDGQSVTLAAYGT-DRIGRSGLPGTVRNHFFQRFGTAAL 370 Query: 329 AGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYH 388 + + P + AA +G +A T+ Y+ Sbjct: 371 ISLIGAV---------PTLAADNYAANEVASDTAENVGTDLGEAVNTVMADYL----SIP 417 Query: 389 PVIPIGAGNEVTVVFQDGF 407 P I + G V + Sbjct: 418 PTISVNQGAVVMIRVDADL 436 >UniRef50_Q3C0D3 Type IV secretion system protein VirB10 n=3 Tax=Xanthomonas RepID=Q3C0D3_XANC5 Length = 406 Score = 61.8 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 69/271 (25%), Gaps = 26/271 (9%) Query: 145 PEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNE 204 + P S P A G G S V Sbjct: 139 IPPNSNNQAAASAQPVGDSGDQGPSNAGALGGGSGERGAQDPNSRFARAVSGNGVAVSKA 198 Query: 205 GKQGPSLPYIPSGSFAKAMLIEGA--DANASVTG--NESTVPMQLRITGLVEMPNSKTYD 260 + + G +A+L A D V Q R +P Sbjct: 199 NQIDNLPYKVLQGKLIEAVLEPRAISDLPGMVCATVQRDVYGEQDR---NKLIP--WGSR 253 Query: 261 ATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNG 320 G + G +R V + DG + + G G G+ G V Sbjct: 254 VCGVYSAEVRKGQ---DRLFVIWNTVRR-PDGVQVALDSAG-ADQLGTAGMGGIVDTHFA 308 Query: 321 KILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYY 380 +I G + + G+ + Y + + + A++ +Q++ Y Sbjct: 309 EIFGMSALLSIIGAGA--------SNAGVSSGDQYNSTAAYRQSVQQAAAQTSQSVLQPY 360 Query: 381 IKRAEQYHPVIPIGAGNEVTVVFQDGFQLKT 411 I P I + AG+ V + Sbjct: 361 I----NIPPTITVPAGSRVRIYVNKDLDFTP 387 >UniRef50_Q2NC51 Type IV secretion system protein B10, putative n=3 Tax=Erythrobacter RepID=Q2NC51_ERYLH Length = 368 Score = 61.5 bits (147), Expect = 7e-08, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 76/287 (26%), Gaps = 37/287 (12%) Query: 125 ANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQV 184 A A P ASP P + G+ + P GN Sbjct: 117 AQSPDAVTVPRANPNASPSLVFDASARAAGPEAAVAPGTASALPGGGNASGNSANDFASR 176 Query: 185 TYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQ 244 P + R V + G+ A+L D + Sbjct: 177 VGGVGGGPAQAARMV---------NPATTVTQGTLIPAILETAIDTDVPGFVRAVVSQDV 227 Query: 245 LRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVS 304 G + ++ G + G +RA V + DG ++ + + Sbjct: 228 RSFDGKNVL-VPRSSRLVGQYQSGVQGGQ---KRAYVIWTRLIR-PDGVSVPLQS-PAIG 281 Query: 305 FRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMG 364 F G G++G+V R + G A V G+G + +G +A A Sbjct: 282 FDGTTGLRGDVNSRFFQRFGSAMLLSVVGGLGAIASGGASVVIGGAGQSAAAAAVQQDSQ 341 Query: 365 IGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKT 411 +G PVI + G + V T Sbjct: 342 VG----------------------PVIRVRQGEPIRVFTARDLDFST 366 >UniRef50_A4V6Q9 Putative TraB-family protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=A4V6Q9_PSEFS Length = 526 Score = 61.1 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 45/306 (14%), Positives = 84/306 (27%), Gaps = 19/306 (6%) Query: 116 LAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPG 175 + Q + + + G P Q S P P N + A P Sbjct: 196 VQTQAQTQSSFQGKSGGGPGTQSETSLFNDMSAPTPSNQTGQTNNENLNAQFNDVYGKPN 255 Query: 176 NGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA------D 229 P + K+ + + SF + + G + Sbjct: 256 TAQQNNQAFQSSGQPAAQPVGLTAEEAAAKKKAQDTYTVEAFSFVEVTTLHGVSCPIGAN 315 Query: 230 ANASVTGNESTV-PMQLRITGLVEMPNSKTYDATGCFVGL----EAWGDVSSERAIVRTR 284 A + ++ P+ L + G+ PN D + S+ RA +R Sbjct: 316 APGASDSSKIPARPVVLPVHGIFHGPNGVERDIGTAHLMGLCSGRRTSSSSTGRATIRIE 375 Query: 285 NISCLK-DGKTIDMPIKGHVSF--RGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQG--- 338 +S G + G+V + + G + +G+ L + Sbjct: 376 QLSYWDASGGAQMVAATGYVVDMRDNEQDVYGRLDKASGRTLALQAASAAAAAYATTLSS 435 Query: 339 --MERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAG 396 S G + + GD K + G Q +S+ + A+ I + G Sbjct: 436 AEFTNTSSTQNGTSSATSQLTGDATKAAVAQGIGSMFQKISERFEAEADAAVDTIQVEPG 495 Query: 397 NEVTVV 402 + V Sbjct: 496 IRLRFV 501 >UniRef50_D1TIV7 Conjugation TrbI family protein n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TIV7_9BURK Length = 432 Score = 60.7 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 39/126 (30%), Gaps = 12/126 (9%) Query: 289 LKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVG 348 L +GK + + G G G+V KI G ++ + G +S Sbjct: 316 LPNGKHVPLYGGQGADADGSAGFSGDVNSHFLKIFGTSFLTAILLGAFDKGGTSSTTTGP 375 Query: 349 LGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAG-NEVTVVFQDGF 407 LG T +G A + A S + R + P I G G + Sbjct: 376 LGVTQ-----------VGTTAGQVAAQTSQSVLDRYKNIPPTITTGPGERRFMIKVNRDI 424 Query: 408 QLKTVE 413 ++ Sbjct: 425 YMEPYR 430 >UniRef50_A2UVZ7 Putative uncharacterized protein n=1 Tax=Shewanella putrefaciens 200 RepID=A2UVZ7_SHEPU Length = 494 Score = 60.3 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 52/449 (11%), Positives = 119/449 (26%), Gaps = 57/449 (12%) Query: 31 LYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRR 90 + + E E + ++ + + R + A Q+Q + + Sbjct: 37 VGMKTNTAQTQAEVSTSTEQLETISARLKAVEVIEQRLSTIEKQAAEAQLAQEQAKGKAK 96 Query: 91 ELDV-LNKQRGDDQ--RRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEG 147 D + + + ++ ++ + + + P +P + G E Sbjct: 97 GNDKSVKDELTELGVFDKLNRVEKLLSGKDTKHSPDSDETDYTQYGVAPSVPVTIGGGER 156 Query: 148 EPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPP-----PQVTYQSVPVPNRIQRKVFTR 202 P +P + G P P + F Sbjct: 157 SKPNLVKPTINDVGEQYTLPRAPSTIAGARTVPSGDWIMPIDAVMPLDPKKGSVSYAFDS 216 Query: 203 NEGKQG-----------PSLPYIPS--------GSFAKAMLIEGADANASVTGN------ 237 + S P+ G+ A+ + + ++ G Sbjct: 217 KSIEHKNFGTGPTFQTADSKTETPAAKPELIKYGTIAQESTLLDSVTMTALIGRIPVKGT 276 Query: 238 -ESTVPMQLRITGLVEMPNS----------KTYDATGCFVGLEAWGDVSSER-----AIV 281 ++ I N A G + GD+ + + Sbjct: 277 LVDPFEFKVLIGKENLAANGLYVPNLEKMIMRGVAKGHYTETCVSGDIVAATYVFTDGTI 336 Query: 282 RTRNISCLKDGK-------TIDMPIKGHVSF-RGKNGIKGEVVMRNGKILGWAWGAGFVD 333 +T N S +K G + G +S G + G+ +++ G + Sbjct: 337 QTINASDIKTGNGGYNSSGQVTQERLGWLSTPGGTPCVPGKYFSDAPELIAAQGGLAALG 396 Query: 334 GIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPI 393 G+ +++ G G + D K +G G A TL+++ E + ++ + Sbjct: 397 AFAAGLAESAKVTEGTGDSKTTSVNDSGKYALGQGGVGAVNTLTEWINDIKESAYGIVFV 456 Query: 394 GAGNEVTVVFQDGFQLKTVEEMALERTQS 422 + +V + + E Q Sbjct: 457 ESNQKVAIHITKEIPIDYNPEGRKLTYQE 485 >UniRef50_B2UU21 ComB3 protein n=7 Tax=Helicobacter pylori RepID=B2UU21_HELPS Length = 411 Score = 59.5 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 48/361 (13%), Positives = 106/361 (29%), Gaps = 22/361 (6%) Query: 82 QKQYEEIR--RELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMP 139 + + + I + D + ++ + L D AL +++ L + +P Sbjct: 60 KNKIDTINEVKPNDETKSVNENIEKTQKDL-DDFNALVQKLPNLPKDFDKTLIKPQSPSF 118 Query: 140 ASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKV 199 E E S PP + + + + + + Sbjct: 119 NYNTANEEEKTRLVILASRVSSQKETQPPTSIKNSVSNTKYKEKQELEKEYGSSGFKNFK 178 Query: 200 FTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVT---GNESTVPMQLRITGLVEMPNS 256 + L I + A+LI + + + + + V +P Sbjct: 179 RKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESD-IYATMGRAVLIPKG 237 Query: 257 KTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVV 316 G + G+ R + I + I KG +G NG+ G + Sbjct: 238 SRA--IGYYNSNNKIGEY---RLGIAWNRIITPQGVNIILSDAKG-ADIKGYNGMIGTLH 291 Query: 317 MRNG-----KILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASK 371 + + G + G+ G+ A + G +G +++M G S Sbjct: 292 NKYWERYGIPLSLSTLSNGLLIGLTSGLTEAMKNKKGGFNQNYFGDYMMMQMTRQTGIS- 350 Query: 372 AAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDG--FQLKTVEEMALERTQSRAEEDNP 429 + ++ + P+I I G+ + + F + E+ + E++N Sbjct: 351 -LNDIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIPKNNEVLAKFFNEEKEQNND 409 Query: 430 E 430 Sbjct: 410 T 410 >UniRef50_B4RFV2 Type IV secretory pathway, VirB10 component n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFV2_PHEZH Length = 346 Score = 59.5 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 77/293 (26%), Gaps = 39/293 (13%) Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPP 181 + + + P P +PQ + S P S P + Sbjct: 77 RPTLDQPGPDAPQLVPADPARPVPALDPQGTSLAASTPGGRSAQSDESVRRAPLLAYSRR 136 Query: 182 PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTV 241 V + P Q T + G I +GS +L D+ Sbjct: 137 VAVAAPDMIRPPAPQADEPTVKARRLGDRNYLILAGSSLPCVLQTAMDSTT-------PG 189 Query: 242 PMQLRITGLVEMPNS------KTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTI 295 P+ I V N K +G + G R V + +G + Sbjct: 190 PVTCVIPSDVHSDNGALVLLEKGTRVSGEYRTGLKRGQ---RRLHVLWTR-AVTPNGIVL 245 Query: 296 DMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAY 355 + G+ G GEV + G VD G+ A+ GL + Sbjct: 246 QLTS-PAADALGRAGFDGEVDHHFWERFGAGLLLTVVDAGASGVT-AALDTPGLVRLPSP 303 Query: 356 GAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 A L+ G P + G+EVT++ F Sbjct: 304 AASTALEGG--------------------RDISPTLRKPQGSEVTIMAAHDFD 336 >UniRef50_D1RHP0 Legionella vir-like protein LvhB10 n=1 Tax=Legionella longbeachae D-4968 RepID=D1RHP0_LEGLO Length = 383 Score = 59.1 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 46/431 (10%), Positives = 104/431 (24%), Gaps = 66/431 (15%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTT 61 +S++ + K+ + + A+ +S + + E ++ Sbjct: 16 SSLSQVTPPKKAKYFIGLKPLVIGALVSVFMISMAFIPQTKSKREQVEKEGNV------- 68 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVK 121 + +T +Q E ++ E ++ + + + Sbjct: 69 -----------QQDMTLSQNLALIEHMKTEAQKVSVVSPEVHHSDKPVKPPRLR-----H 112 Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPP 181 N T P + GE + Sbjct: 113 EGKLNKETLARMNAPTTFFNASLATGESNNNSDKEQNSILNGNNPNA------------- 159 Query: 182 PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTV 241 Q + + + +P+G A L + T Sbjct: 160 ---------QFLNQQNDITSVTAKRLPHPELTVPAGEMIPATLETAIHSELPGMVRAITT 210 Query: 242 PMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKG 301 + G + + G F G R +V + L +G + + G Sbjct: 211 RDIYSLEGENLL-IPRGSTLVGQFNSAITEGQ---SRILVVWNRL-QLANGVIVTLNSPG 265 Query: 302 HVSFRGKNGIKGEVVM-RNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDV 360 G++G + + + G + + G+ A Y + Sbjct: 266 T-DSIGRSGQGADYINRHFFERFGTSALLSILGAYA--------ANSGVNAQDEYNSQAQ 316 Query: 361 LKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALERT 420 +M I + Q +S ++ + + I G + V L A ++ Sbjct: 317 YRMAIAS----SFQQVSGQTLQNSLNIKSTLQINQGAPINVFVAHD--LDFYGVGAAKQP 370 Query: 421 QSRAEEDNPES 431 S S Sbjct: 371 VSPKYRRVASS 381 >UniRef50_A6D5G1 Probable conjugal transfer protein TrbI n=1 Tax=Vibrio shilonii AK1 RepID=A6D5G1_9VIBR Length = 413 Score = 58.8 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 47/374 (12%), Positives = 95/374 (25%), Gaps = 27/374 (7%) Query: 42 GETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNK---Q 98 + P + + + A +++ + + +E + + + Sbjct: 54 SQIDTSPHPKTALEKLQSERPTARDSTDAVQSSTEPKTKIETLLDPLAKERERVQLSEFR 113 Query: 99 RGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSF 158 R + E Q ++L VT + + + + + + Sbjct: 114 RASLAAQSEWGRQPIVLSNAAKESLPQPTVTTRSDDLRTSDDQRLALKQKLEELSALRER 173 Query: 159 PPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGS 218 QG+ + P + P P I + +P G+ Sbjct: 174 VLQGNYS----IGDNPNVQNEQLMTLENAFSPAPKDIVGFTDENAYNASTDGMMKLPIGT 229 Query: 219 FAKAMLIEGADAN-ASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSE 277 A+ I A ++ + + V +P + S Sbjct: 230 IIPAVTIMKASSDRTGTFKAMVSQDIMDVSEDYVLIPKGAEVIIKSFRMSGANEAINSFV 289 Query: 278 RAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQ 337 V L DGK ID + G GI +V W F+ Sbjct: 290 GMSVPW---IVLPDGKKIDTSKSSGMDREGLTGISDQVDHH--------WVEQFLGVAAY 338 Query: 338 GMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGN 397 + + G G+ + + G + Y+ Q P I G Sbjct: 339 ALVANNTSYQGTGSNNDWD----YASDVSQGVRDQIAPHAQKYL----QLRPTNIIRQGQ 390 Query: 398 EVTVVFQDGFQLKT 411 + V+ +D L Sbjct: 391 AMNVILEDEVYLMP 404 >UniRef50_Q5ZW40 LvhB10 n=5 Tax=Legionella pneumophila RepID=Q5ZW40_LEGPH Length = 363 Score = 58.0 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 87/319 (27%), Gaps = 26/319 (8%) Query: 91 ELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQ 150 E L+ + I L ++NA G P+ + + + Sbjct: 62 EKQSLSMALNQNLELIAALKENNAK-----AQSGYKGGDPRRPPLLKTIQTQTVSKETLA 116 Query: 151 PGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPS 210 N P +F G V T G Q + + + + Sbjct: 117 RMNAPSTFFSSGGNEVISNT--TGGEVQASKTLTGRDGNSEFLNQQNDITSVSAKRLPHP 174 Query: 211 LPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEM-PNSKTYDATGCFVGLE 269 +P+G A L ++ + T + G + P T G F Sbjct: 175 AMTVPAGEMIPATLETAINSELAGMVRAITTRDIFALEGSKLLIPKGST--LVGQFNTAI 232 Query: 270 AWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGA 329 G R V + + +G + + G G++G + + + Sbjct: 233 TQGQ---SRIFVVWNRL-QMTNGIIVTLNSPGS-DPIGRSG-------QAADYIDRHFFE 280 Query: 330 GFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHP 389 F G + A G+ Y + +M I +AA +++ Q P Sbjct: 281 RFGTGALLSVLGAYTATGGVHGQDEYNSMSQYRMNIASSFQQAANQT----LQQDMQTRP 336 Query: 390 VIPIGAGNEVTVVFQDGFQ 408 + I G + V Sbjct: 337 TLQINQGAAINVFVAHDLD 355 >UniRef50_B6D4X3 Conjugation TrbI family protein (Fragment) n=36 Tax=root RepID=B6D4X3_ECOLX Length = 110 Score = 57.6 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 10/107 (9%) Query: 307 GKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIG 366 G G +V +I G Q + + Y + ++ +G Sbjct: 1 GYAGFNDKVNNHYLRIFGSGLLLSVFSAGIQLSQPQASN------GENYSSSQIIAGSLG 54 Query: 367 GGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVE 413 + ++ R P + I G E ++ L T E Sbjct: 55 QQMGQIGMQMAQ----RNMNIQPTLEIRPGYEFNIMVTKDIILPTWE 97 >UniRef50_Q2GD29 Type IV secretion system protein VirB10 n=3 Tax=Neorickettsia RepID=Q2GD29_NEOSM Length = 457 Score = 57.2 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 50/429 (11%), Positives = 108/429 (25%), Gaps = 40/429 (9%) Query: 18 IVVVGTASAIGGALYLSDVDMSGNGET-VAEQEPVPDMTGVVDTTFDDKVRQHATTEMQV 76 ++ + Y S +T + +E + V D D + Sbjct: 38 LIYILIVVVGFFFAYKFFSSESQKEDTHIPARETQVEERVVSDKIKTDTKEGFLVPKDDA 97 Query: 77 TAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVP 136 + + ++ + + + + P Sbjct: 98 ALVLLPPKISDLPKLPAIPVPAIPEKPPVV------PTKPGAGPSLPSFFPQPPGSASSA 151 Query: 137 QMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQ 196 P +TP+ G V + + + +Q Sbjct: 152 MDPPGKVSSGINKYNRSTPMIAFGGGGVTSSEGQSSGISISDPASLLDPSKLGELRRSLQ 211 Query: 197 RKVFTRNEGKQGPSLPYIPSGSFAKA-------MLIEG--ADANASVTGNESTVPMQLRI 247 ++ T E K+ P G +L EG DA N + Sbjct: 212 QRDTTAPEDKELTRTP----GQIVAGYVGDLDYVLTEGKMLDAVLETAVNTDLKAKVRAV 267 Query: 248 TGLVEMP--NSKTYDATGCFVGLEAWGDVS--SERAIVRTRNISCLKDGKTIDMPIKGHV 303 ++ G + D+S R + I L +G I++ V Sbjct: 268 VSRDVFSESGNQILIPKGSRLIGSYSTDISFTQSRVDITWSRII-LPNGIDINLGGFDGV 326 Query: 304 SFRGKNGIKGEVVMRNGKILGWAWG-------AGFVDGIGQGMERASQPA-------VGL 349 G+ G++G V + ++ + +G + G ++ Sbjct: 327 DSLGRAGVRGAVNNKVSNVMSTSILLATARVASGMIVDKIMGTNKSQMNVPKNRPSLKDE 386 Query: 350 GATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQL 409 A + G + A++ ++D Y+KR +P + + G + V Sbjct: 387 NADESKVKGSPGAIIAMQAIQDASKQVTD-YVKRTADVNPTLTVNQGTRLKVFVNQDVVF 445 Query: 410 KTVEEMALE 418 + Sbjct: 446 PRAAFQEYK 454 >UniRef50_A4JUI8 Conjugation TrbI family protein n=6 Tax=cellular organisms RepID=A4JUI8_BURVG Length = 424 Score = 54.9 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 55/420 (13%), Positives = 99/420 (23%), Gaps = 37/420 (8%) Query: 15 WLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVD-TTFDDKVRQHATTE 73 + V A AIGG + + + E A Q V+ ++ + E Sbjct: 24 VMIAVGAIAALAIGGLGFYTQTIEANKAEAEALQAKRERAAEAVERSSANKTDVDKIIEE 83 Query: 74 MQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRI-------EKLGQDNAALAEQVKALGAN 126 Q A + + N ++ E+L N + V + Sbjct: 84 QQAEARRRAAEAAAASSAAAAANAKKPTLSADAVLPTGNTEELKASNDQDSIFVSPIFRA 143 Query: 127 PV-----TATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPP 181 V +P SP + A+ G T Sbjct: 144 GVKVKDAQPQQPQLPNGVISPQQMLLQQAAAQDAAVKEATAQAALASRGGQGVGAMTTQK 203 Query: 182 PQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTV 241 + + K F R + + + E +++ T + Sbjct: 204 RDTAFLNDVAQLSEGNKDFARTGIVGQSHGCTLSPPAKIPVLSSEALNSDRPGTASLIVE 263 Query: 242 PMQLRITGLV---EMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMP 298 G +P T A + A +R +GK + + Sbjct: 264 SDVYANNGDGRCLVIPWGTTIVAPYSSDIQPGQESILVAGAEMRL------PNGKHVPLY 317 Query: 299 IKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFV-DGIGQGMERASQPAVGLGATAAYGA 357 + G G G V +I ++ + S LG T Sbjct: 318 GAQGANGDGAAGFSGHVNNHFLRIYSTSFLTAILVRAFSN--SDQSTTTGPLGVTQ---- 371 Query: 358 GDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAG-NEVTVVFQDGFQLKTVEEMA 416 G A + A + + R + P I G + L+ Sbjct: 372 -------AGSTAGQIAAQTAQSVLDRYKNIPPTITSSPGERHFMLKVNRDMVLEQYRGPR 424 >UniRef50_A8PMY5 IcmE protein n=1 Tax=Rickettsiella grylli RepID=A8PMY5_9COXI Length = 723 Score = 54.5 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 41/296 (13%), Positives = 89/296 (30%), Gaps = 32/296 (10%) Query: 124 GANPVTATGEPVPQMPASPPGPE------GEPQPGNTPVSFPPQGSVAVPPPTAFYPGNG 177 P AT +P ++ PE + Q + + Q + T Sbjct: 445 SNEPTPATVRLLPDTISNSSNPELQRVLERQAQQISAQKADQLQEQMQTAMSTQASQLFT 504 Query: 178 VTPPPQVTY-QSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTG 236 P Y +P +RIQ + T K P + +G+ A+L+ +++ Sbjct: 505 AWASPNQRYVTGIPDVDRIQDGLNTPLAEKGDTKPPAVKAGTILYAILLTAVNSD----- 559 Query: 237 NESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSS--ERAIVRTRNISCLKDGKT 294 P+ I G F G G +S+ ++ ++ ++ K+ Sbjct: 560 --EPGPVLAEI-------------VQGKFKGARLMGTLSNQGQKILLSFNTLTLPHLSKS 604 Query: 295 IDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAA 354 + + + + + G + + F+ G GQ G Sbjct: 605 VAINTVAIDENTARTALSSDTNNHYWLRYGTLFASAFLQGYGQSFLDYGNNYSGAVVINP 664 Query: 355 YGAGDVL--KMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 L + + G + + + ++ P + I +G + ++F Sbjct: 665 SNQPIDLSPRQRVFVGLGQVGEQYAS-ALRNVFNTPPTVKIYSGTPMGILFLSDLS 719 >UniRef50_B4SNC4 Conjugation TrbI family protein n=4 Tax=Bacteria RepID=B4SNC4_STRM5 Length = 417 Score = 54.5 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 67/251 (26%), Gaps = 19/251 (7%) Query: 162 GSVAVPPPTAFYPGNGVT--PPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSF 219 G+ A P +A Q R + + G++ Sbjct: 173 GNRAQPQRSAIDEQTRQALLANMMPNQQGQQKIRRGPDVEDVSSATYIQSPDALLVRGTY 232 Query: 220 AKAMLIEGADAN-ASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSER 278 + +L + A T T P+ + +P + G +R Sbjct: 233 LRCVLETRIITDLAGYTSCLLTEPVYSINGRNLLLPKGSK-------IYGAYGGGPIGKR 285 Query: 279 AIVRTRNISCLKDGKTIDMPIK-GHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQ 337 V I+ ID+ + V G G G+ G + A + Sbjct: 286 VEVIWDRITTPNG---IDVAMSSPGVDQLGGAGHPGQYSAHWGSRIASALMISLIS---D 339 Query: 338 GMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGN 397 + A+ T G ++ ++ + L++ + + + P + I G Sbjct: 340 AFKYAAAEHGPE-TTTIANNGMTVQSPYESATARTMERLANEALS-SNRRPPTVTINQGT 397 Query: 398 EVTVVFQDGFQ 408 V V Sbjct: 398 IVNVYVAKDVD 408 >UniRef50_B7KCN2 Putative uncharacterized protein n=2 Tax=Cyanothece sp. PCC 7424 RepID=B7KCN2_CYAP7 Length = 524 Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 59/426 (13%), Positives = 113/426 (26%), Gaps = 35/426 (8%) Query: 12 QYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTG-----VVDTTFDDKV 66 + +G + GG L + +P + ++T + Sbjct: 98 KLGLVGGATLVIFILAGGFLLQIMNLGNQKPTQKNPIQPQQPLKTESRLEKLETEVETLK 157 Query: 67 RQHATTEMQVTAAQMQKQYE--------EIRRELDVLNKQRGDDQRRIEKLGQDNAALAE 118 + A E + Q+ + + N + + Sbjct: 158 TKLAFAEQEQAIKNAQQTLRIKKSSPMPTVSPAIAPSNSPAPPAPQIQTVYVPRIVTVER 217 Query: 119 QVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGV 178 VK + A P P + S P PQP ++P P V P + V Sbjct: 218 VVKVPQPSQPVAKATPQPPVAQSTPTSTPTPQPMSSPTPKPTPTPQQVNPSVGAEVFSPV 277 Query: 179 TPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGA--DANASVTG 236 P V + P + + P + G+ + +L + + S Sbjct: 278 EDPETVVTSATSQPPLPPVSIANPPQASPQTREP-VAVGTSTEGILATAVFGETSTSRNS 336 Query: 237 NESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERA--IVRTRNISCLKDGKT 294 + + + ++ N + + E + S+R + K Sbjct: 337 EQEKNVFVVTLQKPLKNRNGEVVLPENAQLLSEI--NSLSDRGLLYLTVTKAIWEKGDNL 394 Query: 295 IDMPI-KGHVSF---RGKNGIKGEVVMRNGKILGW---AWGAGFVDGIGQGMERAS--QP 345 I+ + KG + GK + +G I + G + + Q R Sbjct: 395 IEKTLPKGALGVRAPEGKPLFAQKYPNESGSITSMDMNLFFLGGLGKVAQLFNRTDSEVV 454 Query: 346 AVGLGATAAYGAGDVLKMGIG---GGASKAAQTLSDYYIKRA---EQYHPVIPIGAGNEV 399 +G T G GG + ++ +R Q + I AG V Sbjct: 455 TTNIGGTIVTNNNRDPNYAAGVLEGGINSIVPQITQRNQQRIAEKLQRTNIWFIPAGTSV 514 Query: 400 TVVFQD 405 V Sbjct: 515 EVYVNQ 520 >UniRef50_A5FU46 Conjugation TrbI family protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FU46_ACICJ Length = 378 Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 29/294 (9%), Positives = 64/294 (21%), Gaps = 28/294 (9%) Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPP------QGSVAVPPPTAFYPG 175 + P P P + + P G + P + G Sbjct: 94 TPSSKPAGLPLPPKQNAGFHNPFLTNQQESPAMKALKAPIMAFNQTGGGSSAQPASNTVG 153 Query: 176 NGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVT 235 P + + + I +G+ L ++ Sbjct: 154 QNGAPSAGSAKPTAFANKLDADQFSAADASMIAHPNFTIAAGTIIPCTLQTAINSTLPGF 213 Query: 236 GNES-TVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKT 294 P++ + + G G +R + ++ Sbjct: 214 VKCVLPQPVRSMTGTVTLLDKGTQ--VLGEVREGLVQGQ---DRLFILWDRAVTPQN--V 266 Query: 295 IDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAA 354 G+ G+ G V + G A + G Q A+Q + G Sbjct: 267 AIQLASPAADPLGRAGVSGAVNNHFLERFGAAIMMTIIGGSLQVAANAAQNSAGNTYLEY 326 Query: 355 YGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 + +++ ++ P + G V++ Sbjct: 327 MNSS--------------TNQIANTTLQHTIDIPPTLTKHQGENVSIFVARDLN 366 >UniRef50_A9HSY7 Putative conjugal transfer n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HSY7_GLUDA Length = 335 Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 85/302 (28%), Gaps = 34/302 (11%) Query: 107 EKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAV 166 + + A L E + AL TG+P+ P + + Sbjct: 35 AAMLSNGARLKEGITALNRQWQEQTGQPLLTDEDLKADPSAVSKASQQDDDDDDDENNDD 94 Query: 167 PPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAML-- 224 P + + + + K G IP G A+A L Sbjct: 95 PQTA---------KRHRKAARVKQRLQQADQTTDDFTPAKIGD-RYKIPVGYIARATLEF 144 Query: 225 IEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVG-LEAWGDVSSERAIVRT 283 +D SV G T P+ + P TG VG + SERA+ Sbjct: 145 TANSDHPGSVKG-MLTQPILSIDRQHILFPAG--SVVTGRIVGTGSGTNSIISERAVFIP 201 Query: 284 RNISCLKDG--KTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMER 341 + I G + G NGI + G +LG G V+ + + Sbjct: 202 QYIVQPDGGAMHITGQEMM---DRYGINGIGDQTDYHIGPMLGAVVGLAAVESLPSVLSN 258 Query: 342 ASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTV 401 SQ +G ++ Q +++ P + + G + Sbjct: 259 LSQ-------------KQNTFNTVGENGAQYMQQGGQTTLQQYMSLRPTVTVRGGRVPFL 305 Query: 402 VF 403 +F Sbjct: 306 IF 307 >UniRef50_Q46705 TraF protein n=9 Tax=root RepID=Q46705_ECOLX Length = 386 Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 45/333 (13%), Positives = 86/333 (25%), Gaps = 27/333 (8%) Query: 79 AQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQM 138 A+ K + ++ + N D + N+ + A G Sbjct: 68 AEADKDGGKAQQANTLPNYSFNSDPDVNKPATAQNSPTDARAVQAAAQADADAGSSNTGA 127 Query: 139 PASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRK 198 S E P+ + + T+ PG S N + Sbjct: 128 RTSNKRKEPSPEELAMQRRLGGELAQTNQAATSNSPGAQPQDNETSEGSSALAKNLTPAR 187 Query: 199 VFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNS-K 257 + G +P G G + + +V G + R++ V + Sbjct: 188 LKASRAGVMANPSLTVPKGKMIPCG--TGTELDTTVPGQ-----VSCRVSQDVYSADGLV 240 Query: 258 TYDATGCFVGLEAWGDVSS--ERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEV 315 G +V + G + R V I +DG +++ G S G GI G+V Sbjct: 241 RLIDKGSWVDGQITGGIKDGQARVFVLWERIRNDQDGTIVNIDSAGTNSL-GSAGIPGQV 299 Query: 316 VMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQT 375 + L A + +Q + Sbjct: 300 DAHMWERLAGAIMISLFSDTLTALVNQTQSN----------------NIQYNSTENSGGQ 343 Query: 376 LSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQ 408 L+ ++ P + G+ V++ Sbjct: 344 LASEALRSYMSIPPTLYDQQGDAVSIFVARDLD 376 >UniRef50_B8GZI0 Type IV secretory pathway, VirB10 channel protein n=2 Tax=Caulobacter vibrioides RepID=B8GZI0_CAUCN Length = 383 Score = 53.4 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 78/303 (25%), Gaps = 23/303 (7%) Query: 106 IEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVA 165 +++ L E + + PA + P P G+ Sbjct: 95 MQQGLPSPEGLPEGPLTPQTDTAAQEATTRLRAPAMVVDLDSRPAPDGDVRVAATIGAEP 154 Query: 166 VPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLI 225 P A P + + V + P G+ A+L Sbjct: 155 APTRAAPRPLADDSKISAEERFAEKV---AGSNADAARATRLTDPSLVAPQGTVIPAILE 211 Query: 226 EGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRN 285 +++ V +R + + G + A G RA + Sbjct: 212 TAINSDLPGFVRA-VVSRDVRGFDGSTVLIPRGSKLIGQYKSGVAAGQT---RAFIVWSR 267 Query: 286 ISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQP 345 + + G +ID+ G G+ G+ GE + G + ++ Sbjct: 268 VLTPQ-GVSIDIASPG-ADRLGRGGLDGETNTHFFRRFGASILLSVLNAGLNAASNN--- 322 Query: 346 AVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQD 405 G G I G+ + A ++ ++R I + G + V Sbjct: 323 --GNGGDNT---------AIIIGSPQQASNIASIALQREIDIPTTITVAQGAPIRVFVAR 371 Query: 406 GFQ 408 Sbjct: 372 DLD 374 >UniRef50_A0P1U3 COMB3 n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P1U3_9RHOB Length = 366 Score = 52.2 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 93/327 (28%), Gaps = 50/327 (15%) Query: 89 RRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGE 148 + + + K + + I + + ++ A P T + A + Sbjct: 62 KEVIREVEKPVVETKEVI-----RTQTVTKYIEPPKAVPRQPTEYELMLQTALRERAAMQ 116 Query: 149 PQPGNTPVSFPPQGSVAVPPPT----AFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNE 204 + ++ + P P +P P Y + P + Sbjct: 117 SELAGADITGDFSDAGNRPAPMNANLPGFPPPEGIDPENDRYSAPPRYSTGAVDNTRILT 176 Query: 205 GKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLV--------EMPNS 256 + + +L G ++ + G+ + ++++ V +P Sbjct: 177 ADR-----------YITGILESGINSQLANNGS-----VVVQVSRDVYGYHGRTKLVPKG 220 Query: 257 KTYDATGCFV--GLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGE 314 V + S R ++ + I +G G+ GE Sbjct: 221 SRMICEYSSVDKVGQTRVGFSCSRILLGESRAEIYQLKAHIG-------DAQGYAGLSGE 273 Query: 315 VVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQ 374 V R + G A GIG +E A G+ + + GAS+ Sbjct: 274 VNNRFWEKYGSAILT---TGIGTAVEAAVS-----GSQQIDSSNSNIVANGLSGASENIG 325 Query: 375 TLSDYYIKRAEQYHPVIPIGAGNEVTV 401 T++ ++ PVI I G V V Sbjct: 326 TITAALLEDTVDLKPVIRIAQGTRVQV 352 >UniRef50_B9D151 VirB10 n=1 Tax=Campylobacter rectus RM3267 RepID=B9D151_WOLRE Length = 397 Score = 49.9 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 43/326 (13%), Positives = 87/326 (26%), Gaps = 24/326 (7%) Query: 85 YEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPG 144 Y+ ++ + G+ +++E+L + A A P T E + Sbjct: 66 YKAGKKAPSEDGQNLGEILKKLEELEAKKQSGQIAPGAPAATPEDMTKEQEQMAQRARDK 125 Query: 145 PEGEPQPGNTPVSFPPQGSVAVPPPTAFY--------PGNGVTPPPQVTYQSVPVPNRIQ 196 E + + + A N Sbjct: 126 QEELKAKQESLKQEIRRDNQAAYENKMRELIRAQILANRNNEIKNVNQNSSKYGADGFSN 185 Query: 197 RKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEMPNS 256 +K + + I +G A+L ++ S G + Sbjct: 186 QKSIDISTNEHRLYRT-IRAGRLIPAILTSAISSDLSGIVTAQIEQDIYAAMGRAVL-IP 243 Query: 257 KTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVV 316 + G + G ER +R R I + I G NG+ G + Sbjct: 244 RGSKVIGFYTNDTKIG---HERLEIRWREIITPQGINIILTDAMA-ADNMGMNGVVGAIN 299 Query: 317 MRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTL 376 + + GI + + + A+ + + I A ++ Sbjct: 300 NKYWERY----------GIAYSISTITNALLLGIASKMGNSNNSYATEIYSNARSDISSV 349 Query: 377 SDYYIKRAEQYHPVIPIGAGNEVTVV 402 I++ Q P I I +G+ + +V Sbjct: 350 VQDIIQQQSQIKPTIEIKSGSRIFLV 375 >UniRef50_C1CP01 Pneumococcal surface protein A n=75 Tax=Streptococcus pneumoniae RepID=C1CP01_STRZT Length = 724 Score = 49.9 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 51/175 (29%), Gaps = 11/175 (6%) Query: 63 DDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQR--GDDQRRIEKLGQDNAALAEQV 120 D+ ++ E+ A ++Q + ++ +E+ L D + L A ++ Sbjct: 357 DELDKEAEEAELDKKADELQNKVADLEKEISNLEILLGGADSEDDTAALQNKLATKKAEL 416 Query: 121 KALGA------NPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYP 174 + N + G+ +P + P P + P+ P P P Sbjct: 417 EKTQKELDAALNELGPDGDEEETPAPAPQPEQPAPAPKPEQPAPAPKPEQPAPAPKPEQP 476 Query: 175 GNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSL---PYIPSGSFAKAMLIE 226 P + K T G + + Y GS A L Sbjct: 477 APAPKPEQPAKPEKPAEEPTQPEKPATPKTGWKQENGMWYFYNTDGSMATGWLQN 531 >UniRef50_Q7WDT6 Type IV secretion system protein ptlG homolog n=3 Tax=Bordetella RepID=PTLG_BORBR Length = 374 Score = 49.5 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 75/302 (24%), Gaps = 39/302 (12%) Query: 127 PVTATGEPVPQMPASPPGPEGEPQPGNT------------PVSFPPQGSVAVPPPTAFYP 174 P P+P MPA+P +P+P P + S A+ A Sbjct: 87 PREPEPAPLPDMPAAPDPILPQPRPAPPVPPPPIRAPYDYDEPAPRRDSAALKSGPAMMV 146 Query: 175 GNGVTPPPQVTYQSVPVPNRIQRKVF----TRNEGKQGPSLPYIPSGSFAKAMLIEGADA 230 + G + G+F +L Sbjct: 147 ATAARLGQTERAGMADDGVSADAATLIGRNVSRATRSGDRDYRLLPGTFIDCILQTRIVT 206 Query: 231 NASV----TGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVS--SERAIVRTR 284 N + + V +P G V E D++ S+R V Sbjct: 207 NVPGLTTCIVSRD---VYSASGKRVLVP-------RGTTVVGEYRADLAQGSQRIYVAWS 256 Query: 285 NISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQ 344 + + G TI++ V G G+ G V + + G A + M + Sbjct: 257 RL-FMPSGLTIELAS-PAVDGTGAAGLPGVVDDKFAQRFGGALLLSVLGDATSYMLARAT 314 Query: 345 PAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQ 404 A AG + + Y +Q I I + Sbjct: 315 DARHGVNVNLTAAG-TMNSLAASALNNTINIPPTLYKNHGDQ----IGILVARPLDFSIL 369 Query: 405 DG 406 G Sbjct: 370 RG 371 >UniRef50_Q0KKK7 VirB10 type IV secretion protein n=1 Tax=Plasmid pLB1 RepID=Q0KKK7_9ZZZZ Length = 391 Score = 48.7 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 30/196 (15%), Positives = 53/196 (27%), Gaps = 28/196 (14%) Query: 214 IPSGSFAKAMLIEGADANASVTGN-ESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWG 272 I +GSF +L D++ + + +V + G + G Sbjct: 210 ILAGSFIPCVLQTAMDSSQPGYVSCIIPRDIYSDNGRVVLLEKGTR--VLGEYQTGVQRG 267 Query: 273 DVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFV 332 R + G ID+ G++G+ G V + G A Sbjct: 268 KY---RLFAVWNR-AVTPRGVAIDVGS-PASDALGRSGMAGGVKNFFWERFGAALL---F 319 Query: 333 DGIGQGMERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIP 392 + A+ + SD ++ Q PV+ Sbjct: 320 SSLNDAASIAASEVSDADNVTRVPSQA-----------------SDTILRDTMQIQPVLR 362 Query: 393 IGAGNEVTVVFQDGFQ 408 I G EV ++ F Sbjct: 363 INQGAEVGIMVARDFD 378 >UniRef50_B6JNK3 VirB10 type IV secretion protein n=9 Tax=Helicobacter RepID=B6JNK3_HELP2 Length = 412 Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 42/329 (12%), Positives = 76/329 (23%), Gaps = 33/329 (10%) Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTP- 180 + P + N + + P+ P T Sbjct: 81 TTQEPTTQTSPNPSVSANPNIKDYSHLNNNLNQQNNTITHLQQVLQSPSKIKPKPKHTKE 140 Query: 181 ---------PPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLP------YIPSGSFAKAMLI 225 P + P N + I + A LI Sbjct: 141 QLEFLNTRLKPLEPTKPATKPETEYGVDSFTNLKYKDIGTNEHKLLRTITADRMIPAFLI 200 Query: 226 EGADANASVTGNESTVPMQLRITGLVEM-PNSKTYDATGCFVGLEAWGDVSSERAIVRTR 284 + + G + P G + G R + Sbjct: 201 TPISSQIAGKVTAQVESDIFASMGRAVLIPKGSK--VIGYYNNNNQIGQY---RLNIAWT 255 Query: 285 NISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNG-----KILGWAWGAGFVDGIGQGM 339 I + G I + +G NG+ G+ + RN +L G + GI + Sbjct: 256 RIITPQ-GINIMLTNARGADVKGYNGLVGKYISRNFQRYGIPLLTNTLSNGLLIGITSAL 314 Query: 340 ERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEV 399 GD L M + + + +++ +P+I I G+ V Sbjct: 315 ANRQNRKGDGN----PFFGDYLLMQLTRNTGMGINQVINQMLRQYGAQNPIIIIREGSRV 370 Query: 400 TVVFQDG-FQLKTVEEMALERTQSRAEED 427 + F K + L + Sbjct: 371 FISPNLDIFIPKPKDGEVLAEFFKEKKPP 399 >UniRef50_A9KDM0 IcmE n=7 Tax=Coxiella burnetii RepID=A9KDM0_COXBN Length = 1039 Score = 48.0 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 71/252 (28%), Gaps = 24/252 (9%) Query: 161 QGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFA 220 Q S+ A + + Q P P+ P I +G+ Sbjct: 799 QMSLQAQKLMAGWSNDSGQAYQVALQQPATTPVGGNVSGQQGAGAAAKPTGPVIKAGTIM 858 Query: 221 KAMLIEGADANASVTGNESTVPMQLRITGLVEMPNSKTYDATGCFVGLEAWGDVSSE--R 278 A+L G +++ P+ I TG G + GD S + Sbjct: 859 FAVLDTGINSD-------EKSPILATI-------------VTGKLKGSKLIGDFSRVDKK 898 Query: 279 AIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQG 338 +++ ++ T + + I V G + + F+ G+ QG Sbjct: 899 VLLKFNLLNVPSFDHTFGINAVAIDPDTARTAIAKSVNSHYLLRYGSLFASAFLSGLSQG 958 Query: 339 -MERASQPAVGLGATAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGN 397 ++ S G + I G + + + P I + G Sbjct: 959 IIQSGSTEDCFFGICHRQYSKLNTAQYIALGMGNVGEQYAT-VMGNNFNRAPTIRVPGGT 1017 Query: 398 EVTVVFQDGFQL 409 + ++F L Sbjct: 1018 GIGLLFMSDITL 1029 >UniRef50_A9IYG1 Vbh10 protein n=2 Tax=Bartonella RepID=A9IYG1_BART1 Length = 395 Score = 48.0 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 45/433 (10%), Positives = 107/433 (24%), Gaps = 64/433 (14%) Query: 3 SINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTF 62 +I+ + +K + + + + A ++ + + Sbjct: 19 NISQSLGKK----IVVAIACIGVCAYVVWNILSSPTEQKETAKAHKKQAQNFHNSLAP-- 72 Query: 63 DDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKA 122 E+ + + + + + + DD A A+ K+ Sbjct: 73 ---------LELAPADPRAKMAPITLPPPQPLAPEPKKDDPLLDAARRAPVLAFAKGSKS 123 Query: 123 LGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPP 182 + V T P+ + A + Q + ++ P Sbjct: 124 QLKDIVNTTLNPLDKFNALENLAKMNTQNSSALQDTQNFATLLQP--------------- 168 Query: 183 QVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAKAMLIEGADANASVTGNESTVP 242 K G I G+ +L +++ + Sbjct: 169 --------------TKTEEAKAKLIGNRNFIIAMGTSIPCILETALNSDQPGFASC---- 210 Query: 243 MQLRITGLVEMPNSKTYDA--TGCFVGLEAWGDVSS--ERAIVRTRNISCLKDGKTIDMP 298 I + ++ G V E G + R V + G I + Sbjct: 211 ----IINRDILSDNGRVVLLDKGTQVIGEYRGGIKQGQSRLFVLWTR-AKTPTGVIIPLA 265 Query: 299 IKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGATAAYGAG 358 G+ G G + + G + +DG + + + G Sbjct: 266 SPAT-DSLGRAGFDGNINTHWWERFGSSLLLTVIDGA------TTTLTNKIAGKSNKGGS 318 Query: 359 DVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKTVEEMALE 418 + G GA+ + + ++ P + G V + +V ++ + Sbjct: 319 NNSGGGGFEGANNTGKEAASIALENQINIPPTLEKFQGELVNIFVAKDLDFSSVYKLTIT 378 Query: 419 RTQSRAEEDNPES 431 R + + S Sbjct: 379 RKKRNTFSRSTPS 391 >UniRef50_A8GMU9 VirB10 protein n=15 Tax=Rickettsia RepID=A8GMU9_RICAH Length = 484 Score = 48.0 bits (112), Expect = 9e-04, Method: Composition-based stats. Identities = 32/192 (16%), Positives = 55/192 (28%), Gaps = 8/192 (4%) Query: 152 GNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSL 211 PVS P V V V ++ +G Sbjct: 132 PLPPVSLPSTSGTLVESDAEKKRREAKRKSAIVLVAGVEPKKTPEQITAEATFKDRGDMS 191 Query: 212 PYIPSGSFAKAMLIEGADANASVTGNESTVPMQLRITGLVEM-PNSKTYDATGCFVGLEA 270 + G A+L +++ V + P G + + Sbjct: 192 LVLGRGKLIDAVLETAINSDLGGEIRAIISRDVFSEQDKVILIPKGSK--IFGKY--ATS 247 Query: 271 WGDVSSERAIVRTRNISCLKDGKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWG-A 329 S R V I L +G TI+ V G+ G++G V + + A + Sbjct: 248 TSSDSYGRVSVIWDRID-LTNGYTIEFDS-PAVDNLGRPGLQGRVDNKYKEQFANAVLQS 305 Query: 330 GFVDGIGQGMER 341 GF G+ + ++R Sbjct: 306 GFNIGLAKVLDR 317 >UniRef50_UPI00017C3087 PREDICTED: similar to diaphanous 1 n=1 Tax=Bos taurus RepID=UPI00017C3087 Length = 1204 Score = 47.2 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 43/137 (31%), Gaps = 5/137 (3%) Query: 41 NGETVAEQEPVPDMTGVVDTTFDDKVRQHAT-----TEMQVTAAQMQKQYEEIRRELDVL 95 + + ++ +D+ + ++ + +Q + + + E + Sbjct: 471 KTKVEKSEAKATELEKKLDSELTARHELQVEMKKMESDFEQKLQDIQGEKDALDSEKQKI 530 Query: 96 NKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTP 155 ++ D + + +L + A L+++++ + + P S P Sbjct: 531 ATEKQDLEAEVSQLTGEVAKLSKELEDAKKEVASLSAAVTAVAPPSSATVTPAPPLPGDS 590 Query: 156 VSFPPQGSVAVPPPTAF 172 P SV PP Sbjct: 591 GPVIPPLSVPTPPLPEA 607 >UniRef50_Q93894 Protein M03B6.3, confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q93894_CAEEL Length = 642 Score = 46.8 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 60/183 (32%), Gaps = 20/183 (10%) Query: 58 VDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALA 117 + T++ ++ + +Q + E R +++V K + +++ ++L ++ + Sbjct: 275 ILQTYEQTLQTKELLTRRKQLEVLQTELTEQRMKIEVQKKMEEELRKKEKQLEEEKQQME 334 Query: 118 EQVKALGANPVTATGEPVPQMPASPPG---------PEGEPQPGNTPVSFPPQGSVAVPP 168 +++K +N ++ G P+ PA P P P P P P P Sbjct: 335 QRLKEQLSNWHSSFGPNQPRPPAPLPTDLQLENLGYPPSPPAPLAQPTPAPAVSENTDEP 394 Query: 169 PT-----------AFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSG 217 P N V + + ++ + + P IP Sbjct: 395 PAFIVASSHERKLTEERENLVEQQMMPVPPPAKLSSALRNHIRYSPTPVVTEATPVIPPS 454 Query: 218 SFA 220 + Sbjct: 455 TSV 457 >UniRef50_UPI00006CE94C YEATS family protein n=1 Tax=Tetrahymena thermophila RepID=UPI00006CE94C Length = 497 Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 22/188 (11%), Positives = 49/188 (26%), Gaps = 4/188 (2%) Query: 32 YLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRE 91 Y + ++ + D V+ + + + K+ E++++E Sbjct: 300 YYDWKQHYLKFDAQDHKQKLDDALVVIKEQNEKTKMD--LEKCDKDIEALNKEIEQLQKE 357 Query: 92 LDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQP 151 D+ K+ ++Q+ ++ Q + Q N + + P Sbjct: 358 QDLKQKKLLEEQQLQQQQQQQQSQDGNQFSYPTPNFQNPQSQSQINEFPNEQIRSIPSTP 417 Query: 152 GN--TPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGP 209 N P ++A PP P + + P Sbjct: 418 SNIQQQPPNIPIQNIAPPPQMQNQYNPPNQYPMGQPPAAPMPQQQGPPPPLNMMPNSYAP 477 Query: 210 SLPYIPSG 217 P I Sbjct: 478 PNPNIKMN 485 >UniRef50_Q8VQ55 Pneumococcal surface protein A (Fragment) n=21 Tax=Streptococcus pneumoniae RepID=Q8VQ55_STRPN Length = 608 Score = 44.9 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 56/191 (29%), Gaps = 7/191 (3%) Query: 42 GETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQR-- 99 + E E + D T D+ ++ E+ A ++Q + ++ +E+ L Sbjct: 223 AKKQTELEKLLDSLDPEGKTQDELDKEAEEAELDKKADELQNKVADLEKEISNLEILLGG 282 Query: 100 GDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFP 159 D + L A +++ A + P PQP + Sbjct: 283 ADSEDDTAALQNKLATKKAELEKTQKELDAAL-NELGPDGDEEETPAPAPQPEQPAPAPK 341 Query: 160 PQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSL----PYIP 215 P+ P P P Q+ QS + R Q K + Y Sbjct: 342 PEQPAPAPKPEQPAPAPKPEHQLQLQNQSNQLSRRNQLKSLLTRKTGWKQENGMWYFYNT 401 Query: 216 SGSFAKAMLIE 226 GS A L Sbjct: 402 DGSMATGWLQN 412 >UniRef50_A2CDD9 Proline-rich region n=2 Tax=Prochlorococcus marinus RepID=A2CDD9_PROM3 Length = 253 Score = 44.9 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 34/223 (15%), Positives = 73/223 (32%), Gaps = 10/223 (4%) Query: 6 TIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTTFDDK 65 +++ WLG ++VG A+G + + + GN + +Q P + Sbjct: 13 QKNRKRPRFWLGPLLVGGCFALGYGMTQRIMILRGNTQQPQQQSFGPTPLPFPGERLEGL 72 Query: 66 VRQH--ATTEMQVTAAQMQKQYEEIRRELDVLNKQRG-----DDQRRIEKLGQDNAALAE 118 R+H + ++Q A + + R+ + KQ + Q+ A+ + Sbjct: 73 RRRHGGSNADLQADVAAKEAKITAKRKTKEQAEKQAKQQAEKLAAAAALRREQELQAIRQ 132 Query: 119 QVKALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGV 178 + A+P +P P P + PV+ P+ + + P Sbjct: 133 ATETDSADPG--LADPALAAPELPAPINPQGTRPAQPVAPKPKPARTPASDSLGRPTPPQ 190 Query: 179 TPPPQVTYQSVPVPNRIQRKVFTRNEGKQGPSLPYIPSGSFAK 221 P+ P + + R + + P+ F + Sbjct: 191 PVAPKPKPARTPASDSLGRPTPPQPVAPKPKPSST-PASDFLR 232 >UniRef50_A9SY51 Predicted protein n=2 Tax=Physcomitrella patens subsp. patens RepID=A9SY51_PHYPA Length = 645 Score = 44.5 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 53/179 (29%), Gaps = 11/179 (6%) Query: 48 QEPVPDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIE 107 E ++ GV+D + + ++ + + ++ E L + D Q+ Sbjct: 222 NEQFGELAGVLDPDRPKNDKATILGDSVQVVKDLRSEVKRLKCEQTSLLDESRDLQQEKT 281 Query: 108 KLGQDNAALAEQVKALGANPVTATG------EPVPQMPASPPGPEGEPQPGNTPVSFPPQ 161 +L ++ AAL + + L P P P P PV PP Sbjct: 282 ELREEKAALKTETEQLQNQLQQRLQGMLPWISMDPTAALMGAPPYPYPHPHPMPVPQPPS 341 Query: 162 GSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNEG-----KQGPSLPYIP 215 +V P A P V P + V+ PY+P Sbjct: 342 SAVPSSTPPASEPAPAVPTSQPPVVGPSPFLSLAPPGVYMHPYAIYGARPPERGHPYMP 400 >UniRef50_C1F5S5 Putative conjugal transfer protein, TrbI family n=2 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5S5_ACIC5 Length = 423 Score = 43.4 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 42/365 (11%), Positives = 94/365 (25%), Gaps = 57/365 (15%) Query: 86 EEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGAN-PVTATGEPVPQMPASPPG 144 E ++ + Q+ ++ + + Q+ + Q G N P + +SP Sbjct: 77 ETQQQLQAKRDTQQRQYRQELAQAKQELQSAEAQPGPEGNNVPPMTAEQRAAIYGSSPNA 136 Query: 145 PEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKVFTRNE 204 P + + Q P +Q +V + Sbjct: 137 PVITSEASQARAEA---KQRVLAKQREHQQAIDSDTEAIDFEQKAPSSENVQPEVPESVK 193 Query: 205 GKQGPSLPYIPSGSF---------------------------AKAMLIEGADANASVTGN 237 + SF + ++EG N G Sbjct: 194 NTGTTKSSAVQPTSFHKKNTGNAASAMAPYNFDHYQGKLYRIFEGTILEGVVTNHIDGGF 253 Query: 238 ESTVPMQLRIT------GLVEMPNSKTYDATGCFVGLEAWGDVSSERAIVRTRNISCLKD 291 V + L + +P G +++ G+ + V C D Sbjct: 254 SGPVLVMLTTDYYSHNHQHLLLPQGTR--LIG---TVQSVGNAQQRKLFVVFHRAIC-PD 307 Query: 292 GKTIDMPIKGHVSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQPAVGLGA 351 G ++ + + G G+ +V + A + A Sbjct: 308 GFSLSLDNYVGLDQIGTTGLATKVHHGYFQAFAAA----------AAIGGLGGLAQIGNN 357 Query: 352 TAAYGAGDVLKMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVVFQDGFQLKT 411 ++ GI ++ + + ++++ R PVI + G+ + + + Sbjct: 358 GTILDPSTQIRNGISEQSAAEGEQVLNHFLDRL----PVITLKEGSRARIYVSHDILVPS 413 Query: 412 VEEMA 416 E Sbjct: 414 YAEHR 418 >UniRef50_A2DXB4 Formin Homology 2 Domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2DXB4_TRIVA Length = 1322 Score = 42.2 bits (97), Expect = 0.047, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 38/117 (32%), Gaps = 6/117 (5%) Query: 35 DVDMSGNGETVAEQEPVPDMTGVVDTTFDDKVRQHATTEMQV------TAAQMQKQYEEI 88 S N E +A + + D+ + + KV + ++ +K+ E+ Sbjct: 584 INLQSQNKELLANCKALQDVVELEKSQPGVKVSEEDVKSLKENKLLKHDLEMKEKENSEL 643 Query: 89 RRELDVLNKQRGDDQRRIEKLGQDNAALAEQVKALGANPVTATGEPVPQMPASPPGP 145 ++ L + ++ + + + + + ++P P MP Sbjct: 644 TKQNAELKDELEKLKKELSEAKNKIIEIESRPQTAPSSPQIVPSSPSSIMPTVNESA 700 >UniRef50_A4YUF3 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YUF3_BRASO Length = 459 Score = 42.2 bits (97), Expect = 0.048, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 57/204 (27%), Gaps = 11/204 (5%) Query: 2 ASINTIVKRKQYLWLGIVVVGTASAIGGALYLSDVDMSGNGETVAEQEPVPDMTGVVDTT 61 A N + +R + + A Q D D + Sbjct: 30 ADENELDRRGLWRLGWWGAGAVGAVGLAIFV-----------NQAAQGWRKDRISAADLS 78 Query: 62 FDDKVRQHATTEMQVTAAQMQKQYEEIRRELDVLNKQRGDDQRRIEKLGQDNAALAEQVK 121 ++ Q E Q A Q+ E + + D L ++ ++ +E + A + Q Sbjct: 79 RQAQLLQSLARETQSEARQLGSAIETLNTDRDQLYRRVTILEQNVELVTGALAKQSAQAS 138 Query: 122 ALGANPVTATGEPVPQMPASPPGPEGEPQPGNTPVSFPPQGSVAVPPPTAFYPGNGVTPP 181 A ++ T P PQ+ A P P P + S P P +P Sbjct: 139 AASSSGSKPTPAPAPQIAAVESQPPAVPAPSSAQPSPLPAFPNLSPFMPVPGSAAAASPG 198 Query: 182 PQVTYQSVPVPNRIQRKVFTRNEG 205 + PV K Sbjct: 199 QPGAIAAAPVAGVSADKPKPEPSK 222 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.301 0.115 0.252 Lambda K H 0.267 0.0356 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,938,806,676 Number of Sequences: 3077464 Number of extensions: 79179640 Number of successful extensions: 1067802 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 3184 Number of HSP's successfully gapped in prelim test: 4465 Number of HSP's that attempted gapping in prelim test: 882296 Number of HSP's gapped (non-prelim): 103543 length of query: 475 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 343 effective length of database: 634,171,108 effective search space: 217520690044 effective search space used: 217520690044 T: 11 A: 40 X1: 16 ( 6.9 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 94 (41.0 bits)