BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (214 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_C0ATM0 Putative uncharacterized protein n=2 Tax=Enterob... 229 6e-59 UniRef50_B6X9Y1 Putative uncharacterized protein n=2 Tax=Provide... 167 2e-40 UniRef50_D1P6F8 Protein smp n=2 Tax=Providencia RepID=D1P6F8_9ENTR 158 9e-38 UniRef50_D0I7W5 Putative SerB-cotransposed membrane protein n=1 ... 77 5e-13 UniRef50_C6ALY5 Protein AhpA n=4 Tax=Pasteurellaceae RepID=C6ALY... 76 6e-13 UniRef50_B8F5V9 AphA-like protein/membrane protein affecting hem... 73 6e-12 UniRef50_A6VR58 Membrane protein n=1 Tax=Actinobacillus succinog... 72 1e-11 UniRef50_Q9L8J3 Protein ahpA n=6 Tax=Pasteurellaceae RepID=AHPA_... 72 2e-11 UniRef50_D0LZV9 Smp-like protein n=52 Tax=Vibrionales RepID=D0LZ... 70 6e-11 UniRef50_B6ENG7 Peripheral membrane protein n=1 Tax=Aliivibrio s... 69 1e-10 UniRef50_B5FAA2 SMP protein n=2 Tax=Vibrio fischeri RepID=B5FAA2... 63 7e-09 UniRef50_Q3IDP2 Putative uncharacterized protein n=2 Tax=Alterom... 52 1e-05 UniRef50_A4C6X0 Putative uncharacterized protein n=1 Tax=Pseudoa... 49 2e-04 UniRef50_Q9EYZ3 SerB-cotransposed membrane protein (Fragment) n=... 46 0.001 UniRef50_A1U1I2 Sensor protein n=2 Tax=Marinobacter RepID=A1U1I2... 44 0.002 UniRef50_B0TQ87 Membrane protein n=21 Tax=Shewanella RepID=B0TQ8... 44 0.005 UniRef50_A4SRU0 Putative SerB-cotransposed membrane protein n=1 ... 42 0.013 UniRef50_B9DPX7 Sensor protein n=1 Tax=Staphylococcus carnosus s... 39 0.084 >UniRef50_C0ATM0 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C0ATM0_9ENTR Length = 246 Score = 229 bits (583), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 117/216 (54%), Positives = 153/216 (70%), Gaps = 3/216 (1%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M + KLKF+L + I+L C+ALL LMQGAS+FS+ +Q R Q EELA+TLA QV ++ Sbjct: 3 MLKDKLKFKLQKTAIILICIALLAFLMQGASYFSRANQHARITQFEELAKTLAEQVAFSL 62 Query: 61 APLMRTDSPDEKR--IQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK 118 + + S D I A L+ LT SR+LDA +Y E G IA SGE+V V++RLAL+G+ Sbjct: 63 STYLDDSSKDNVNPLIMANLNHLTHNSRVLDASLYLEDGTQIAHSGENVTVKERLALEGQ 122 Query: 119 KAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVV 178 K+GG FN Q+V P+ GK+ P G+LRLTLDTH L TE+ QVDNTTN+LR+MLL++LAIG + Sbjct: 123 KSGGSFNHQLVVPVPGKDKPKGFLRLTLDTHQLITESSQVDNTTNLLRVMLLVALAIGFL 182 Query: 179 LTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE 214 L+ LLQ WQQSP+LLTA+ P P E+ E KE Sbjct: 183 LSHNLLQLTPVHWQQSPYLLTANLP-PRTEKGEDKE 217 >UniRef50_B6X9Y1 Putative uncharacterized protein n=2 Tax=Providencia RepID=B6X9Y1_9ENTR Length = 266 Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 125/200 (62%), Gaps = 2/200 (1%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M KL FRLH+ VIV+ C+AL+ LM G S+ + + R QL++L + LA QV ++ Sbjct: 14 MISMKLPFRLHKTVIVIVCIALITFLMHGVSYLGYSQSQSRLEQLKQLTQVLAEQVAFSL 73 Query: 61 APLMRTDSPDE--KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK 118 + M S D +RI A L+ L + ILDA +Y G L+ + GES V++RL+L+G Sbjct: 74 SDYMVPGSKDFNLERINANLNHLAKDQYILDASLYTAAGTLVTQVGESTTVKERLSLEGN 133 Query: 119 KAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVV 178 F+ Q+V P+ G P GYLRLT+DT +L T+ QQ DNTTNI+R+ +LLSL IG + Sbjct: 134 TGLQNFHYQLVIPVQGAKEPNGYLRLTIDTESLTTDLQQADNTTNIMRVFILLSLCIGFI 193 Query: 179 LTRTLLQGKRTRWQQSPFLL 198 L TL++ K+ + QQ P ++ Sbjct: 194 LANTLMRLKKKKGQQQPLIV 213 >UniRef50_D1P6F8 Protein smp n=2 Tax=Providencia RepID=D1P6F8_9ENTR Length = 252 Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 84/207 (40%), Positives = 123/207 (59%), Gaps = 7/207 (3%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 KL FRLH+ VI++ C+AL+ LM G S+ + + R Q ++L + LA QV +++ M Sbjct: 2 KLPFRLHKTVIIVICVALVTLLMHGVSYLGYSQNQNRVEQFKQLTQVLAEQVAFSLSDYM 61 Query: 65 RTDSPDE--KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGG 122 S D +RI A L+ L + ILDA +Y G L+ + GE V++RLA+D A Sbjct: 62 VPGSKDFNLERINANLNHLARDKYILDASLYTAAGVLVTQVGEPTTVKERLAIDSNVALQ 121 Query: 123 YFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRT 182 F Q+V P+ G+ P GYLRLT+DT L + QQ DN+TNI+R +LL+L IG +L T Sbjct: 122 NFQYQLVVPVQGEKEPKGYLRLTIDTELLIADTQQTDNSTNIMRTFILLALCIGFILANT 181 Query: 183 LLQGKRTRWQQSPFLLTASKPVPEEEE 209 L + K+ + QQ P ++T PEE + Sbjct: 182 LFRLKKKKGQQQPLIVT-----PEEND 203 >UniRef50_D0I7W5 Putative SerB-cotransposed membrane protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I7W5_VIBHO Length = 202 Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/201 (27%), Positives = 105/201 (52%), Gaps = 7/201 (3%) Query: 3 RTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAP 62 R +LK RL + ++V+ C + ++ L ++ + + + Q E L+R + RQ Sbjct: 6 RKRLK-RLWQFIVVVACFSTVMMLFMYSNQLNNRNYKMLYDQTESLSRVILRQAAATAHT 64 Query: 63 LMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK-KAG 121 + +D D +Q +++ L E ILDA VYD +G +A S ++ + + L+ Sbjct: 65 ALVSD--DVASLQTLVNHLQSEPLILDAAVYDIKGKRVASSLSAMPLEELTGLNTPLSVA 122 Query: 122 GYFNQQIVEPIAGKNGPLGYLRLTLDT-HTLATEAQQVDNTTNILRLMLLLSLAIGVVLT 180 QQ+VEPIA G++R+TL+ + + +++ + N++R M+L+++A G +L Sbjct: 123 SIGRQQLVEPIAENGNISGFIRITLEHGEVIKAASNRLEQSINLVRAMILVAIATGALLI 182 Query: 181 RTLLQGKRTRWQQSPFLLTAS 201 T +R W +S FLL ++ Sbjct: 183 FT-FANRRDLW-RSTFLLKSN 201 >UniRef50_C6ALY5 Protein AhpA n=4 Tax=Pasteurellaceae RepID=C6ALY5_AGGAN Length = 225 Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 1/169 (0%) Query: 15 IVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRI 74 IVL C ++ ++ G F Q Q+ ++ L RQ + L+ ++ E+ + Sbjct: 17 IVLLCAGIMAVILFGVKQFKIGSQLSSVNQVANVSHLLTRQQASLFSMLLVNNAKTERLV 76 Query: 75 QAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAG 134 + LD E +LDA +Y G+L+A+S S ++R L LD ++ +QQIVEPI Sbjct: 77 EN-LDNFVKEEFVLDAALYARNGELLAQSTNSPDMRSLLGLDKQEDTEADSQQIVEPIYS 135 Query: 135 KNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTL 183 NG G+LR+T D + +++ + L +++ +GV+ +L Sbjct: 136 SNGVEGFLRVTFDAKYGQSTKSKINQIFHRLYGEIIIVFLVGVLFASSL 184 >UniRef50_B8F5V9 AphA-like protein/membrane protein affecting hemolysin expression n=7 Tax=Pasteurellaceae RepID=B8F5V9_HAEPS Length = 221 Score = 73.2 bits (178), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 50/188 (26%), Positives = 94/188 (50%), Gaps = 5/188 (2%) Query: 13 AVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEK 72 AVI+ CL ++ ++ G + F Q Q+ L+ L RQ + ++ ++ +++ Sbjct: 15 AVIMAICLMIVWIILTGINHFKVGSQLAGINQVTNLSHLLVRQQAKLFSLMLVKNAKNDE 74 Query: 73 RIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPI 132 ++A LD E+ ++DA +Y G+L+A S ++E R+ D + QQIVEPI Sbjct: 75 LVEA-LDVFAKEAFVIDANLYSPSGNLVAHSSNAIEFNPRVN-DKIQQEPALTQQIVEPI 132 Query: 133 AGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILR---LMLLLSLAIGVVLTRTLLQGKRT 189 ++ +G+LR+T D+ T +V+ ++L ++L +S + V LQ T Sbjct: 133 FAQDDLIGFLRVTFDSQYGQTTQHKVNELFHLLYGELIILFMSGGLFVSCFYYFLQLNTT 192 Query: 190 RWQQSPFL 197 + S F+ Sbjct: 193 KTVSSNFI 200 >UniRef50_A6VR58 Membrane protein n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VR58_ACTSZ Length = 223 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 73/134 (54%), Gaps = 3/134 (2%) Query: 14 VIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKR 73 VI+ C A++ ++ G F Q Q+ L+ L RQ T N+ ++ ++ + Sbjct: 16 VIIALCAAVMALILFGVKQFQTGSQLAGVNQVANLSHLLVRQQT-NLFSMLLQNNANGAT 74 Query: 74 IQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIA 133 + LD+L ++ +LDA +Y G+L+A+S S+ +R RL L ++ QQIVEPI Sbjct: 75 LTESLDKLINDDMVLDASLYANNGELLAQSTASLNLRRRLGLGADESERV--QQIVEPIY 132 Query: 134 GKNGPLGYLRLTLD 147 +N +G+LR++ D Sbjct: 133 AENSVIGFLRVSFD 146 >UniRef50_Q9L8J3 Protein ahpA n=6 Tax=Pasteurellaceae RepID=AHPA_PASMU Length = 226 Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 2/170 (1%) Query: 15 IVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRI 74 I++ C+A++ ++ G F Q Q+ L+ L RQ N+ ++ ++ +++ Sbjct: 17 IIILCIAIVSVILFGVQQFKIGSQLASVNQVSNLSHLLIRQQA-NLLSMLLVNNASTEQL 75 Query: 75 QAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFN-QQIVEPIA 133 LD E +LDA +Y +G+L+A + +R L L+ N QQIVEPI Sbjct: 76 TESLDAFAKEEFVLDASIYSNRGELLAHTSHFQNLRLTLGLNSPTQPDEENTQQIVEPIY 135 Query: 134 GKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTL 183 NG G+LR+T D+ T ++D+ + L L++ GV+L ++ Sbjct: 136 SLNGIEGFLRVTFDSKYGKTTQSKIDHLFHQLYGELIIIFLAGVLLASSI 185 >UniRef50_D0LZV9 Smp-like protein n=52 Tax=Vibrionales RepID=D0LZV9_VIBSE Length = 179 Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 91/180 (50%), Gaps = 4/180 (2%) Query: 22 LLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQL 81 +L ++ + S+ +++ + QLE L + L Q +L+ + ++ T D++R+ + +QL Sbjct: 1 MLFITIKNSVVISKGNEKIQAQQLETLTKVLISQASLSASEMILT--KDQERLLKLTNQL 58 Query: 82 TDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFN-QQIVEPIAGKNGPLG 140 + + DA +YD QG +A S +++ VR+ L LD A QQ+VEP+ +G Sbjct: 59 AQDRLVFDATIYDAQGVRLASSEDALSVREVLGLDTPLATASIGRQQLVEPVFADEALIG 118 Query: 141 YLRLTLDT-HTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLT 199 ++R+T +T A + + +M+L+S G++ L + R + LLT Sbjct: 119 FVRVTFETGRVTAISDHHYRKSDRYMYMMVLMSFVCGMLFIMILRRQPIRRKKAQNLLLT 178 >UniRef50_B6ENG7 Peripheral membrane protein n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ENG7_ALISL Length = 199 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 47/179 (26%), Positives = 94/179 (52%), Gaps = 14/179 (7%) Query: 12 RAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDE 71 +++++L +A ++ ++ S N+Q +N QL++L+RT+ RQ L ++ D D Sbjct: 10 KSLMLLSLIAFSYFILINSTVISDNNQIIQNKQLQDLSRTMTRQAALFAVDSIKKD--DH 67 Query: 72 KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVE------VRDRLALDGKKAGGYFN 125 + + + + L E+ + DA +YD +G ++++S ++ + L++DG Sbjct: 68 EALLQLTNNLAKENLVFDATIYDAEGGVLSKSSNALTASQITGINTPLSIDGIG-----R 122 Query: 126 QQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRL-MLLLSLAIGVVLTRTL 183 QQ++EPI + LG+LR+T + TL A ++ L ML++SL G+ + L Sbjct: 123 QQLIEPIVKDDRVLGFLRITFEKSTLTGFANHHYRKSDRLMFGMLIISLVSGMFIMAIL 181 >UniRef50_B5FAA2 SMP protein n=2 Tax=Vibrio fischeri RepID=B5FAA2_VIBFM Length = 198 Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 10/173 (5%) Query: 12 RAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDE 71 + +++L +A ++ ++ S ++Q +N QL++L+RT+ RQ A L DS E Sbjct: 9 KGLMLLSLMAFSYFILINSTIISDSNQVIQNKQLQDLSRTMTRQ-----AALFAVDSIKE 63 Query: 72 KRIQAIL---DQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK-KAGGYFNQQ 127 +A+ + L E + DA +YD +G ++ +S ++ L+ G QQ Sbjct: 64 DNHEALFQLTNNLAKERLVFDATIYDAEGRILGKSDNALTASQITGLNTPLSIDGIGRQQ 123 Query: 128 IVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRL-MLLLSLAIGVVL 179 ++EPI + LG+LR+T + TL A ++ L ML +SL G+++ Sbjct: 124 LIEPIIKDDHLLGFLRVTFEKSTLTGFANHHYRKSDRLMFGMLAISLVSGMLI 176 >UniRef50_Q3IDP2 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IDP2_PSEHT Length = 206 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 23/199 (11%) Query: 7 KFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA----- 61 K RL R ++ CL LL SW N Q + L + A + A+ +T +A Sbjct: 15 KKRLVRLLLATACLILL-------SWVGINSSFQSHQLLYDSADSTAKSLTKFMALNAKT 67 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSG--ESVEVRDRLALDGKK 119 PL+ + P ++ A+ + ++ + +L A +YD+QG LIA S +S+ V +L+ + Sbjct: 68 PLIEKNKP---QLNALCNNISKDEFVLSATIYDQQGMLIASSDNWQSLHVSGQLS-ESTP 123 Query: 120 AGGYFNQQIVEPIAGKNG-PLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVV 178 +EP+ + P+G++ +T T T + N + L +LL L I + Sbjct: 124 GVSKLKTPFIEPVVSDDDRPVGFVSITYLTRAAVTSSH---NHFHDLGRQVLLMLVIACI 180 Query: 179 LTRTLLQGKRTRWQQSPFL 197 T +G + WQ + ++ Sbjct: 181 FTWQFGRGLKI-WQVNRYI 198 >UniRef50_A4C6X0 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6X0_9GAMM Length = 205 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 17/189 (8%) Query: 9 RLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDS 68 RL R + L CL + V + +S+ S + + Q AR+LA Q++L +R D Sbjct: 17 RLTRLSLALLCLFIFVNIAFNSSFQSHDILLK---QSHTTARSLALQMSLAARDAIRVD- 72 Query: 69 PDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQ-- 126 D+ ++ I++ L + + A ++D G+LI +S +++ ++ KA +Q Sbjct: 73 -DKAALERIVNNLVQDPYVQSAAIFDPFGELITKSNNGYLYKEQ--INQPKALPGVSQLL 129 Query: 127 -QIVEPIAGKNGP-LGYLRLTLDTHTLATEAQQVDNTTN-ILRLMLLLSLAIGVVLTRTL 183 ++EPI ++G LG++RLT + E + + LML+LS+ ++ R + Sbjct: 130 TPVIEPIISQSGKRLGFVRLTYLSRAAMHEGHSYFHQLGRQIALMLILSIVGTWLVARGI 189 Query: 184 LQGKRTRWQ 192 RWQ Sbjct: 190 -----KRWQ 193 >UniRef50_Q9EYZ3 SerB-cotransposed membrane protein (Fragment) n=6 Tax=Photobacterium RepID=Q9EYZ3_PHOPR Length = 83 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%) Query: 126 QQIVEPIAGKNGPLGYLRLTLDTHTLATEA-QQVDNTTNILRLMLLLSLAIGVVLTRTLL 184 QQIVEPI + +G++R+TL+ L A Q++ T+I+R +++ +L IG +L T Sbjct: 10 QQIVEPIFSGDNIIGFMRITLEHGKLLENANNQIEEMTSIVRGLIIAALLIGFLLAYTF- 68 Query: 185 QGKRTRWQQSPFLL 198 G+R PF L Sbjct: 69 -GRRKDIWHFPFSL 81 >UniRef50_A1U1I2 Sensor protein n=2 Tax=Marinobacter RepID=A1U1I2_MARAV Length = 782 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 17/182 (9%) Query: 3 RTKLKFRLHR-AVIVLFCLALLVALMQ-GASWFSQNHQRQRNPQ-LEELARTLARQVTLN 59 R +L +RL R V+V L L++ L+Q +F+ R + L E++++ A Q+ N Sbjct: 6 RQRLSYRLTRDTVLVAMVLGLVLNLIQITLDYFTARESMDREVRALIEISQSPASQIAYN 65 Query: 60 VAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEV-RDRLALD-G 117 + D + + +LD L +DA + D G +A + +S V R R D Sbjct: 66 I---------DVRLAEELLDGLLQHPATIDARIIDSDGQTMAAASQSSPVSRYRWISDLL 116 Query: 118 KKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGV 177 A FN+++ P + PLG L +T+DT+ Q + TN L + LL SLA+ Sbjct: 117 FGASRVFNEELQVPQLA-DLPLGQLVVTIDTYHYGI--QFLTRATNTLIIGLLKSLALSG 173 Query: 178 VL 179 VL Sbjct: 174 VL 175 >UniRef50_B0TQ87 Membrane protein n=21 Tax=Shewanella RepID=B0TQ87_SHEHH Length = 493 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 46/186 (24%), Positives = 95/186 (51%), Gaps = 15/186 (8%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQR--NPQLEELARTLARQVTLNVAP 62 K R+ R + ++ +AL + L Q W + Q Q+ Q E++AR L +Q AP Sbjct: 8 KKSHRISRLLQIMIAIALFIGLDQL--WETSLLQGQQLLKSQTEKMARLLVQQTAYGAAP 65 Query: 63 LMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGG 122 ++ + +++++Q + L + +++ A ++ E G ++ +SV + + L D ++ Sbjct: 66 ALQLE--NDEQLQWLAQALVLDPKVMSASIFSEDGVRLSF-AQSV-IDEDLEPDSEELSS 121 Query: 123 YFNQ--QIVEPIA--GKNGPLGYLRLTLDTHTLATEAQQVDNTT-NILRLMLLLSLAIGV 177 +Q VE ++ GKN LGY+ + L+ E ++ + ++MLL++ IG+ Sbjct: 122 ILDQYPPYVEAVSQDGKN--LGYVEVRLEPKYFFNEIKEAHHINMEQQQIMLLIAGLIGM 179 Query: 178 VLTRTL 183 +L+R L Sbjct: 180 LLSRAL 185 >UniRef50_A4SRU0 Putative SerB-cotransposed membrane protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SRU0_AERS4 Length = 205 Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 4/78 (5%) Query: 81 LTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG----GYFNQQIVEPIAGKN 136 L E ILDA +YD +G +A+S ++V + L + G G Q V+ I + Sbjct: 75 LAAEPEILDATLYDARGIPLAQSDQAVPLDSLLPIGGDNKSLPEQGKGRIQFVQEIVDEE 134 Query: 137 GPLGYLRLTLDTHTLATE 154 LGYLR+TL+ H L E Sbjct: 135 QTLGYLRITLEEHQLLAE 152 >UniRef50_B9DPX7 Sensor protein n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DPX7_STACT Length = 614 Score = 39.3 bits (90), Expect = 0.084, Method: Compositional matrix adjust. Identities = 21/99 (21%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 LH +++++ L +++ + +F+ N +R+ + A+Q+ +N+ + D+ Sbjct: 10 LHTKLVIVYVLLIIIGMQIIGLYFTNNLERELTQTFKNNISQYAKQIEINIEKVKEEDNS 69 Query: 70 D--EKRIQAILDQLTDESRILDAGVYDEQGDLIARSGES 106 D +K IQ +L++ + I D +IA S +S Sbjct: 70 DNGQKEIQNLLNEYANRQEIEQINYIDRNQIIIATSKQS 108 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0ATM0 Putative uncharacterized protein n=2 Tax=Enterob... 226 4e-58 UniRef50_D1P6F8 Protein smp n=2 Tax=Providencia RepID=D1P6F8_9ENTR 216 4e-55 UniRef50_B6X9Y1 Putative uncharacterized protein n=2 Tax=Provide... 214 1e-54 UniRef50_C6ALY5 Protein AhpA n=4 Tax=Pasteurellaceae RepID=C6ALY... 170 3e-41 UniRef50_B8F5V9 AphA-like protein/membrane protein affecting hem... 169 4e-41 UniRef50_Q9L8J3 Protein ahpA n=6 Tax=Pasteurellaceae RepID=AHPA_... 162 9e-39 UniRef50_D0I7W5 Putative SerB-cotransposed membrane protein n=1 ... 156 4e-37 UniRef50_D0LZV9 Smp-like protein n=52 Tax=Vibrionales RepID=D0LZ... 155 1e-36 UniRef50_A6VR58 Membrane protein n=1 Tax=Actinobacillus succinog... 154 2e-36 UniRef50_B6ENG7 Peripheral membrane protein n=1 Tax=Aliivibrio s... 154 2e-36 UniRef50_B5FAA2 SMP protein n=2 Tax=Vibrio fischeri RepID=B5FAA2... 153 5e-36 UniRef50_Q3IDP2 Putative uncharacterized protein n=2 Tax=Alterom... 141 1e-32 UniRef50_A4C6X0 Putative uncharacterized protein n=1 Tax=Pseudoa... 136 5e-31 UniRef50_Q9EYZ3 SerB-cotransposed membrane protein (Fragment) n=... 74 4e-12 Sequences not found previously or not previously below threshold: UniRef50_A4SRU0 Putative SerB-cotransposed membrane protein n=1 ... 66 1e-09 UniRef50_Q5QXU3 Uncharacterized conserved membrane protein, smp ... 62 1e-08 UniRef50_A1SXG3 Putative uncharacterized protein n=1 Tax=Psychro... 61 2e-08 UniRef50_B0TQ87 Membrane protein n=21 Tax=Shewanella RepID=B0TQ8... 60 6e-08 UniRef50_A6VUV9 Putative uncharacterized protein n=1 Tax=Marinom... 55 1e-06 UniRef50_A6F6B1 Putative uncharacterized protein n=1 Tax=Moritel... 52 1e-05 UniRef50_C1DLN8 HAMP domain protein n=1 Tax=Azotobacter vineland... 50 7e-05 UniRef50_Q487B3 Putative uncharacterized protein n=1 Tax=Colwell... 49 1e-04 UniRef50_Q1N0U5 Putative uncharacterized protein n=1 Tax=Bermane... 48 2e-04 UniRef50_A0Y8S5 Putative uncharacterized protein n=1 Tax=marine ... 48 2e-04 UniRef50_A3Y5R2 Putative uncharacterized protein n=1 Tax=Marinom... 47 5e-04 UniRef50_Q1YQI9 Putative uncharacterized protein n=1 Tax=gamma p... 47 6e-04 UniRef50_Q39QV4 Sensor protein n=9 Tax=Desulfuromonadales RepID=... 45 0.002 UniRef50_D2L920 Hpt sensor hybrid histidine kinase n=1 Tax=Desul... 45 0.002 UniRef50_A3WNV0 Uncharacterized conserved membrane protein, smp ... 45 0.002 UniRef50_D0M8D2 GGDEF family protein n=4 Tax=Vibrio RepID=D0M8D2... 45 0.002 UniRef50_A6B380 FOG ggdef domain n=6 Tax=Vibrio RepID=A6B380_VIBPA 44 0.003 UniRef50_D2YAM3 Signal transduction histidine kinase regulating ... 44 0.004 UniRef50_C4XQ28 Sensor protein n=1 Tax=Desulfovibrio magneticus ... 44 0.005 UniRef50_B7J3C7 Sensor protein n=2 Tax=Acidithiobacillus ferroox... 43 0.008 UniRef50_B8GMD2 Putative uncharacterized protein n=1 Tax=Thioalk... 43 0.008 UniRef50_A2P3N3 Signal transduction histidine kinase regulating ... 42 0.011 UniRef50_A6EVW8 Sensor protein n=1 Tax=Marinobacter algicola DG8... 42 0.020 UniRef50_A4J6D4 Putative methyl-accepting chemotaxis sensory tra... 41 0.020 UniRef50_B4RXD9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Al... 41 0.022 UniRef50_C8WZC3 Sensor protein n=1 Tax=Desulfohalobium retbaense... 41 0.027 UniRef50_Q15SP2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 40 0.041 UniRef50_B3E2P6 Sensor protein n=1 Tax=Geobacter lovleyi SZ RepI... 40 0.042 UniRef50_Q1ILH4 Sensor protein n=1 Tax=Candidatus Koribacter ver... 39 0.087 UniRef50_C8WZA5 Sensor protein n=2 Tax=Desulfohalobiaceae RepID=... 39 0.097 >UniRef50_C0ATM0 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C0ATM0_9ENTR Length = 246 Score = 226 bits (576), Expect = 4e-58, Method: Composition-based stats. Identities = 117/216 (54%), Positives = 153/216 (70%), Gaps = 3/216 (1%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M + KLKF+L + I+L C+ALL LMQGAS+FS+ +Q R Q EELA+TLA QV ++ Sbjct: 3 MLKDKLKFKLQKTAIILICIALLAFLMQGASYFSRANQHARITQFEELAKTLAEQVAFSL 62 Query: 61 APLMRTDSPDEKR--IQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK 118 + + S D I A L+ LT SR+LDA +Y E G IA SGE+V V++RLAL+G+ Sbjct: 63 STYLDDSSKDNVNPLIMANLNHLTHNSRVLDASLYLEDGTQIAHSGENVTVKERLALEGQ 122 Query: 119 KAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVV 178 K+GG FN Q+V P+ GK+ P G+LRLTLDTH L TE+ QVDNTTN+LR+MLL++LAIG + Sbjct: 123 KSGGSFNHQLVVPVPGKDKPKGFLRLTLDTHQLITESSQVDNTTNLLRVMLLVALAIGFL 182 Query: 179 LTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE 214 L+ LLQ WQQSP+LLTA+ P P E+ E KE Sbjct: 183 LSHNLLQLTPVHWQQSPYLLTANLP-PRTEKGEDKE 217 >UniRef50_D1P6F8 Protein smp n=2 Tax=Providencia RepID=D1P6F8_9ENTR Length = 252 Score = 216 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 123/211 (58%), Gaps = 7/211 (3%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPL 63 KL FRLH+ VI++ C+AL+ LM G S+ + + R Q ++L + LA QV +++ Sbjct: 1 MKLPFRLHKTVIIVICVALVTLLMHGVSYLGYSQNQNRVEQFKQLTQVLAEQVAFSLSDY 60 Query: 64 MRTDSPDE--KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG 121 M S D +RI A L+ L + ILDA +Y G L+ + GE V++RLA+D A Sbjct: 61 MVPGSKDFNLERINANLNHLARDKYILDASLYTAAGVLVTQVGEPTTVKERLAIDSNVAL 120 Query: 122 GYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTR 181 F Q+V P+ G+ P GYLRLT+DT L + QQ DN+TNI+R +LL+L IG +L Sbjct: 121 QNFQYQLVVPVQGEKEPKGYLRLTIDTELLIADTQQTDNSTNIMRTFILLALCIGFILAN 180 Query: 182 TLLQGKRTRWQQSPFLLTASKPVPEEEESEK 212 TL + K+ + QQ P ++T PEE + Sbjct: 181 TLFRLKKKKGQQQPLIVT-----PEENDESD 206 >UniRef50_B6X9Y1 Putative uncharacterized protein n=2 Tax=Providencia RepID=B6X9Y1_9ENTR Length = 266 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 86/200 (43%), Positives = 125/200 (62%), Gaps = 2/200 (1%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M KL FRLH+ VIV+ C+AL+ LM G S+ + + R QL++L + LA QV ++ Sbjct: 14 MISMKLPFRLHKTVIVIVCIALITFLMHGVSYLGYSQSQSRLEQLKQLTQVLAEQVAFSL 73 Query: 61 APLMRTDSPDE--KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK 118 + M S D +RI A L+ L + ILDA +Y G L+ + GES V++RL+L+G Sbjct: 74 SDYMVPGSKDFNLERINANLNHLAKDQYILDASLYTAAGTLVTQVGESTTVKERLSLEGN 133 Query: 119 KAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVV 178 F+ Q+V P+ G P GYLRLT+DT +L T+ QQ DNTTNI+R+ +LLSL IG + Sbjct: 134 TGLQNFHYQLVIPVQGAKEPNGYLRLTIDTESLTTDLQQADNTTNIMRVFILLSLCIGFI 193 Query: 179 LTRTLLQGKRTRWQQSPFLL 198 L TL++ K+ + QQ P ++ Sbjct: 194 LANTLMRLKKKKGQQQPLIV 213 >UniRef50_C6ALY5 Protein AhpA n=4 Tax=Pasteurellaceae RepID=C6ALY5_AGGAN Length = 225 Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats. Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 1/183 (0%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 + + K+ + IVL C ++ ++ G F Q Q+ ++ L RQ ++ Sbjct: 3 LVKEKMIKFMMFFGIVLLCAGIMAVILFGVKQFKIGSQLSSVNQVANVSHLLTRQQA-SL 61 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA 120 ++ ++ +R+ LD E +LDA +Y G+L+A+S S ++R L LD ++ Sbjct: 62 FSMLLVNNAKTERLVENLDNFVKEEFVLDAALYARNGELLAQSTNSPDMRSLLGLDKQED 121 Query: 121 GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT 180 +QQIVEPI NG G+LR+T D + +++ + L +++ +GV+ Sbjct: 122 TEADSQQIVEPIYSSNGVEGFLRVTFDAKYGQSTKSKINQIFHRLYGEIIIVFLVGVLFA 181 Query: 181 RTL 183 +L Sbjct: 182 SSL 184 >UniRef50_B8F5V9 AphA-like protein/membrane protein affecting hemolysin expression n=7 Tax=Pasteurellaceae RepID=B8F5V9_HAEPS Length = 221 Score = 169 bits (429), Expect = 4e-41, Method: Composition-based stats. Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 5/200 (2%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 ++R +L AVI+ CL ++ ++ G + F Q Q+ L+ L RQ Sbjct: 3 ISREQLIKSSIIAVIMAICLMIVWIILTGINHFKVGSQLAGINQVTNLSHLLVRQQAKLF 62 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA 120 + ++ ++ +++ ++A LD E+ ++DA +Y G+L+A S ++E R+ D + Sbjct: 63 SLMLVKNAKNDELVEA-LDVFAKEAFVIDANLYSPSGNLVAHSSNAIEFNPRVN-DKIQQ 120 Query: 121 GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVL- 179 QQIVEPI ++ +G+LR+T D+ T +V+ ++L L++ G + Sbjct: 121 EPALTQQIVEPIFAQDDLIGFLRVTFDSQYGQTTQHKVNELFHLLYGELIILFMSGGLFV 180 Query: 180 --TRTLLQGKRTRWQQSPFL 197 LQ T+ S F+ Sbjct: 181 SCFYYFLQLNTTKTVSSNFI 200 >UniRef50_Q9L8J3 Protein ahpA n=6 Tax=Pasteurellaceae RepID=AHPA_PASMU Length = 226 Score = 162 bits (409), Expect = 9e-39, Method: Composition-based stats. Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 2/172 (1%) Query: 13 AVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEK 72 + I++ C+A++ ++ G F Q Q+ L+ L RQ N+ ++ ++ + Sbjct: 15 SSIIILCIAIVSVILFGVQQFKIGSQLASVNQVSNLSHLLIRQQA-NLLSMLLVNNASTE 73 Query: 73 RIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFN-QQIVEP 131 ++ LD E +LDA +Y +G+L+A + +R L L+ N QQIVEP Sbjct: 74 QLTESLDAFAKEEFVLDASIYSNRGELLAHTSHFQNLRLTLGLNSPTQPDEENTQQIVEP 133 Query: 132 IAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTL 183 I NG G+LR+T D+ T ++D+ + L L++ GV+L ++ Sbjct: 134 IYSLNGIEGFLRVTFDSKYGKTTQSKIDHLFHQLYGELIIIFLAGVLLASSI 185 >UniRef50_D0I7W5 Putative SerB-cotransposed membrane protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I7W5_VIBHO Length = 202 Score = 156 bits (395), Expect = 4e-37, Method: Composition-based stats. Identities = 54/201 (26%), Positives = 103/201 (51%), Gaps = 7/201 (3%) Query: 3 RTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAP 62 R +LK RL + ++V+ C + ++ L ++ + + + Q E L+R + RQ Sbjct: 6 RKRLK-RLWQFIVVVACFSTVMMLFMYSNQLNNRNYKMLYDQTESLSRVILRQAAATAHT 64 Query: 63 LMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK-KAG 121 + +D D +Q +++ L E ILDA VYD +G +A S ++ + + L+ Sbjct: 65 ALVSD--DVASLQTLVNHLQSEPLILDAAVYDIKGKRVASSLSAMPLEELTGLNTPLSVA 122 Query: 122 GYFNQQIVEPIAGKNGPLGYLRLTLDT-HTLATEAQQVDNTTNILRLMLLLSLAIGVVLT 180 QQ+VEPIA G++R+TL+ + + +++ + N++R M+L+++A G +L Sbjct: 123 SIGRQQLVEPIAENGNISGFIRITLEHGEVIKAASNRLEQSINLVRAMILVAIATGALLI 182 Query: 181 RTLLQGKRTRWQQSPFLLTAS 201 T R +S FLL ++ Sbjct: 183 FTF--ANRRDLWRSTFLLKSN 201 >UniRef50_D0LZV9 Smp-like protein n=52 Tax=Vibrionales RepID=D0LZV9_VIBSE Length = 179 Score = 155 bits (391), Expect = 1e-36, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 91/180 (50%), Gaps = 4/180 (2%) Query: 22 LLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQL 81 +L ++ + S+ +++ + QLE L + L Q +L+ + ++ T D++R+ + +QL Sbjct: 1 MLFITIKNSVVISKGNEKIQAQQLETLTKVLISQASLSASEMILT--KDQERLLKLTNQL 58 Query: 82 TDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG-GYFNQQIVEPIAGKNGPLG 140 + + DA +YD QG +A S +++ VR+ L LD A QQ+VEP+ +G Sbjct: 59 AQDRLVFDATIYDAQGVRLASSEDALSVREVLGLDTPLATASIGRQQLVEPVFADEALIG 118 Query: 141 YLRLTLDT-HTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLT 199 ++R+T +T A + + +M+L+S G++ L + R + LLT Sbjct: 119 FVRVTFETGRVTAISDHHYRKSDRYMYMMVLMSFVCGMLFIMILRRQPIRRKKAQNLLLT 178 >UniRef50_A6VR58 Membrane protein n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VR58_ACTSZ Length = 223 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 3/183 (1%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 + + K+ VI+ C A++ ++ G F Q Q+ L+ L RQ T N+ Sbjct: 3 LVKEKILKSALLTVIIALCAAVMALILFGVKQFQTGSQLAGVNQVANLSHLLVRQQT-NL 61 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA 120 ++ ++ + + LD+L ++ +LDA +Y G+L+A+S S+ +R RL L ++ Sbjct: 62 FSMLLQNNANGATLTESLDKLINDDMVLDASLYANNGELLAQSTASLNLRRRLGLGADES 121 Query: 121 GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT 180 QQIVEPI +N +G+LR++ D +V + L L++ +G +L Sbjct: 122 ERV--QQIVEPIYAENSVIGFLRVSFDGRYGQATQSKVSQLFHHLYGELIIVFLVGALLA 179 Query: 181 RTL 183 ++ Sbjct: 180 SSV 182 >UniRef50_B6ENG7 Peripheral membrane protein n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ENG7_ALISL Length = 199 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 93/178 (52%), Gaps = 4/178 (2%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 + +++++L +A ++ ++ S N+Q +N QL++L+RT+ RQ L ++ D Sbjct: 8 IIKSLMLLSLIAFSYFILINSTVISDNNQIIQNKQLQDLSRTMTRQAALFAVDSIKKD-- 65 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK-KAGGYFNQQI 128 D + + + + L E+ + DA +YD +G ++++S ++ ++ G QQ+ Sbjct: 66 DHEALLQLTNNLAKENLVFDATIYDAEGGVLSKSSNALTASQITGINTPLSIDGIGRQQL 125 Query: 129 VEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILR-LMLLLSLAIGVVLTRTLLQ 185 +EPI + LG+LR+T + TL A ++ L ML++SL G+ + L + Sbjct: 126 IEPIVKDDRVLGFLRITFEKSTLTGFANHHYRKSDRLMFGMLIISLVSGMFIMAILKK 183 >UniRef50_B5FAA2 SMP protein n=2 Tax=Vibrio fischeri RepID=B5FAA2_VIBFM Length = 198 Score = 153 bits (386), Expect = 5e-36, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 90/178 (50%), Gaps = 4/178 (2%) Query: 12 RAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDE 71 + +++L +A ++ ++ S ++Q +N QL++L+RT+ RQ L ++ D + Sbjct: 9 KGLMLLSLMAFSYFILINSTIISDSNQVIQNKQLQDLSRTMTRQAALFAVDSIKED--NH 66 Query: 72 KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK-KAGGYFNQQIVE 130 + + + + L E + DA +YD +G ++ +S ++ L+ G QQ++E Sbjct: 67 EALFQLTNNLAKERLVFDATIYDAEGRILGKSDNALTASQITGLNTPLSIDGIGRQQLIE 126 Query: 131 PIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILR-LMLLLSLAIGVVLTRTLLQGK 187 PI + LG+LR+T + TL A ++ L ML +SL G+++ L + K Sbjct: 127 PIIKDDHLLGFLRVTFEKSTLTGFANHHYRKSDRLMFGMLAISLVSGMLIMGLLRKRK 184 >UniRef50_Q3IDP2 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IDP2_PSEHT Length = 206 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 23/204 (11%) Query: 7 KFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA----- 61 K RL R ++ CL LL SW N Q + L + A + A+ +T +A Sbjct: 15 KKRLVRLLLATACLILL-------SWVGINSSFQSHQLLYDSADSTAKSLTKFMALNAKT 67 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGE--SVEVRDRLALDGKK 119 PL+ + P ++ A+ + ++ + +L A +YD+QG LIA S S+ V +L+ + Sbjct: 68 PLIEKNKP---QLNALCNNISKDEFVLSATIYDQQGMLIASSDNWQSLHVSGQLS-ESTP 123 Query: 120 AGGYFNQQIVEPIAGKNG-PLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVV 178 +EP+ + P+G++ +T T T + N + L +LL L I + Sbjct: 124 GVSKLKTPFIEPVVSDDDRPVGFVSITYLTRAAVTSSH---NHFHDLGRQVLLMLVIACI 180 Query: 179 LTRTLLQGKRTRWQQSPFLLTASK 202 T +G + WQ + ++ S+ Sbjct: 181 FTWQFGRGLKI-WQVNRYIQKTSQ 203 >UniRef50_A4C6X0 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6X0_9GAMM Length = 205 Score = 136 bits (342), Expect = 5e-31, Method: Composition-based stats. Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 17/199 (8%) Query: 9 RLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDS 68 RL R + L CL + V + +S+ S + Q AR+LA Q++L +R D Sbjct: 17 RLTRLSLALLCLFIFVNIAFNSSFQSHDILL---KQSHTTARSLALQMSLAARDAIRVD- 72 Query: 69 PDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQ-- 126 D+ ++ I++ L + + A ++D G+LI +S +++ ++ KA +Q Sbjct: 73 -DKAALERIVNNLVQDPYVQSAAIFDPFGELITKSNNGYLYKEQ--INQPKALPGVSQLL 129 Query: 127 -QIVEPIAGKNGP-LGYLRLTLDTHTLATEAQQVDNTTNI-LRLMLLLSLAIGVVLTRTL 183 ++EPI ++G LG++RLT + E + + LML+LS+ ++ R + Sbjct: 130 TPVIEPIISQSGKRLGFVRLTYLSRAAMHEGHSYFHQLGRQIALMLILSIVGTWLVARGI 189 Query: 184 LQGKRTRWQQSPFLLTASK 202 RWQ ++ S Sbjct: 190 -----KRWQVLRYIRKISL 203 >UniRef50_Q9EYZ3 SerB-cotransposed membrane protein (Fragment) n=6 Tax=Photobacterium RepID=Q9EYZ3_PHOPR Length = 83 Score = 73.6 bits (179), Expect = 4e-12, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%) Query: 121 GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEA-QQVDNTTNILRLMLLLSLAIGVVL 179 + QQIVEPI + +G++R+TL+ L A Q++ T+I+R +++ +L IG +L Sbjct: 5 ASFGRQQIVEPIFSGDNIIGFMRITLEHGKLLENANNQIEEMTSIVRGLIIAALLIGFLL 64 Query: 180 TRTLLQGKRTRWQQSPFLLTA 200 T G+R PF L Sbjct: 65 AYTF--GRRKDIWHFPFSLRT 83 >UniRef50_A4SRU0 Putative SerB-cotransposed membrane protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SRU0_AERS4 Length = 205 Score = 65.5 bits (158), Expect = 1e-09, Method: Composition-based stats. Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 6/128 (4%) Query: 32 WFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAG 91 Q + + A+ L ++ ++ D E ++ + L E ILDA Sbjct: 28 HMQSESQASLHSEARNRAQALVAYAARDMKRWIKEDKNSE--LERLAQDLAAEPEILDAT 85 Query: 92 VYDEQGDLIARSGESVEVRDRLALDGK----KAGGYFNQQIVEPIAGKNGPLGYLRLTLD 147 +YD +G +A+S ++V + L + G G Q V+ I + LGYLR+TL+ Sbjct: 86 LYDARGIPLAQSDQAVPLDSLLPIGGDNKSLPEQGKGRIQFVQEIVDEEQTLGYLRITLE 145 Query: 148 THTLATEA 155 H L E Sbjct: 146 EHQLLAEK 153 >UniRef50_Q5QXU3 Uncharacterized conserved membrane protein, smp family n=1 Tax=Idiomarina loihiensis RepID=Q5QXU3_IDILO Length = 195 Score = 62.1 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 9/186 (4%) Query: 12 RAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDE 71 RA+ + LL+ ++ + S Q+Q Q + + + + Q + + Sbjct: 16 RALRLAAAGGLLLIIINVWNIASVQSQQQLFSQTQSVTQLMMDQAEHEAHYWLE--HQNT 73 Query: 72 KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGG-YFNQQIVE 130 +R+ A+ D + ++ A + + G+L+ SG + + +D + +VE Sbjct: 74 ERLTALTDNIASHPEVMAATIRNRFGELLVHSGVNSSI-----IDWPTSEDTSEPWVLVE 128 Query: 131 PIAGKNGPLGYLRLTLDTHTLATEAQQVDN-TTNILRLMLLLSLAIGVVLTRTLLQGKRT 189 I ++ GYL++ D + L ++Q N +L+LLL++ GV + + + Sbjct: 129 EINLEDNVSGYLQVIFDKNLLLKQSQTAHNGLMQQGKLLLLLAMLAGVFIMLGFNRIRDR 188 Query: 190 RWQQSP 195 WQ P Sbjct: 189 YWQVEP 194 >UniRef50_A1SXG3 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SXG3_PSYIN Length = 208 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 71/179 (39%), Gaps = 6/179 (3%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 L R V + L + + R Q E + +L + + Sbjct: 8 LLRTVQISSLLIICSIIAYQFISLRNTSDGIRYQQTERFSYSLTNLAASEASRYL--SQQ 65 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDG--KKAGGYFNQQ 127 + +Q ++ +LTD+ + D +YD+ G +I +S +++ + L + K Q Sbjct: 66 KNEDLQLLISELTDDPIVRDVTIYDQFGKIIFQSEDALPLPILLNIASSDDKRAQGIIPQ 125 Query: 128 IVEPIAGKNGPLGYLRLTLDTHTLATEAQQV-DNTTNILRLMLLLSLAIGVVLTRTLLQ 185 I E + N +GY+R+ L+ + + + + + + L+ +LS +G + + Sbjct: 126 IAE-LYKDNEKIGYIRIALEQGKILSLINDYQEKSFSTMLLLFVLSFLVGTIAMALFFR 183 >UniRef50_B0TQ87 Membrane protein n=21 Tax=Shewanella RepID=B0TQ87_SHEHH Length = 493 Score = 59.7 bits (143), Expect = 6e-08, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 85/184 (46%), Gaps = 11/184 (5%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 K R+ R + ++ +AL + L Q Q+ Q E++AR L +Q AP + Sbjct: 8 KKSHRISRLLQIMIAIALFIGLDQLWETSLLQGQQLLKSQTEKMARLLVQQTAYGAAPAL 67 Query: 65 RTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYF 124 + + +++++Q + L + +++ A ++ E G + S + + L D ++ Sbjct: 68 QLE--NDEQLQWLAQALVLDPKVMSASIFSEDGVRL--SFAQSVIDEDLEPDSEELSSIL 123 Query: 125 NQ--QIVEPIAGKNGPLGYLRLTLDTHTL---ATEAQQVDNTTNILRLMLLLSLAIGVVL 179 +Q VE ++ LGY+ + L+ EA ++ + MLL++ IG++L Sbjct: 124 DQYPPYVEAVSQDGKNLGYVEVRLEPKYFFNEIKEAHHINMEQQQI--MLLIAGLIGMLL 181 Query: 180 TRTL 183 +R L Sbjct: 182 SRAL 185 >UniRef50_A6VUV9 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VUV9_MARMS Length = 480 Score = 55.1 bits (131), Expect = 1e-06, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 74/194 (38%), Gaps = 15/194 (7%) Query: 2 ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 R KL + + + L V + + + + Q E L +LA Q N Sbjct: 14 IRKKLSASVITVATFISLMILTVCIFWYTMTHALGNYLSQ--QTEVLGSSLATQAAFNAT 71 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG 121 + + D + +L++L + IL A V++++ +L+A + + + Sbjct: 72 QSILNN--DLLSLNVLLNRLVVDDNILSARVFNKKDELLAEADSG---NSGMKSEQDFRP 126 Query: 122 GYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTR 181 + I ++ +G++ +TLD Q ++N LL+ +AI Sbjct: 127 SDTRRVYSSSIKFRDEIVGHVLITLDKTPAQATLQHLNN--------LLIGVAIFTCTIA 178 Query: 182 TLLQGKRTRWQQSP 195 LL TRW +P Sbjct: 179 LLLVILITRWLFTP 192 >UniRef50_A6F6B1 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F6B1_9GAMM Length = 237 Score = 52.4 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 10/139 (7%) Query: 16 VLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDE---- 71 +L L+L + A N R Q++ L +L T A L+ S + Sbjct: 52 LLIALSLSTFFIFIAISLYNNVTASRYQQVDMLVHSLLDYPTKMAANLIVARSSTDRIIR 111 Query: 72 ----KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQ 127 K++Q ++D++++ + ++ E G L++ S + + + L + + Sbjct: 112 INSKKQLQQLVDEVSENQYVTSLHIFAENGKLLSSSQD--DYVEALMANKHYVAPAGVRV 169 Query: 128 IVEPIAGKNGPLGYLRLTL 146 ++PI N P+G+L+L Sbjct: 170 YLKPILADNKPVGFLQLHF 188 >UniRef50_C1DLN8 HAMP domain protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DLN8_AZOVD Length = 547 Score = 49.7 bits (117), Expect = 7e-05, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 11/105 (10%) Query: 42 NPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIA 101 + Q + L +TL Q + + L+ + D + +L LT + A VY+ L+A Sbjct: 59 HEQADALGQTLTTQTSAAASHLLVAN--DILSLNVLLGNLTKNPLVAHAAVYNADNHLLA 116 Query: 102 RSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTL 146 +G + + + PI ++ G+LR+ L Sbjct: 117 EAGNRPPRMP------PEGDPSLHAR---PITFQDSVTGHLRIVL 152 >UniRef50_Q487B3 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q487B3_COLP3 Length = 230 Score = 49.0 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 45/201 (22%), Positives = 74/201 (36%), Gaps = 26/201 (12%) Query: 15 IVLFCLALLVALMQGASWFSQN--HQRQRNPQLEELARTLARQVTLNVAPLMRTDSPD-- 70 I+ A+L+ ++ + W S + +A+ +Q VA ++ Sbjct: 19 ILQLASAILLIIVLMSLWQSTGERNSDNLTAHFNYIAKQQLQQAIAGVAVILEQSHESKV 78 Query: 71 --EKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFN--- 125 + +Q LD LT + + A +YD G L+ S + + L A + Sbjct: 79 DQDAFLQRYLDGLTKVNFVKQAHLYDATGLLVVSSASVEKDKQGNELAPPSAKSINDLYG 138 Query: 126 ------------QQIVEPIAGKN----GPLGYLRLTLDTHTLATEAQQVDNTTNIL-RLM 168 VE I + GYLR T++ L + D L RLM Sbjct: 139 ISPHQRNVTDTLTPFVEEIRQTDSSSYNLHGYLRFTIEQSYLTDILAKADEEQQSLQRLM 198 Query: 169 LLLSLAIGVVLTRTLLQGKRT 189 LLL+ +G +LTR L + R Sbjct: 199 LLLAGVVGFLLTRGLNRFSRR 219 >UniRef50_Q1N0U5 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N0U5_9GAMM Length = 454 Score = 48.2 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 19/177 (10%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 LHRA+ + ++L +L+ G + + + Q + + TL++Q + A + S Sbjct: 11 LHRAIALAVIFSILASLLVGLTVANSAKAHLQ-QQAQNMRYTLSKQASQQAADAIF--SQ 67 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIV 129 D + IL+ L + + A VYD +IA G+ Q Sbjct: 68 DLLSLNVILNGLVEYDDVAYAAVYDLNNQVIAAQGQGANSE-------TTQPMSIRYQ-- 118 Query: 130 EPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILR-LMLLLSLAIGVVLTRTLLQ 185 N +G+L + LD L Q+ +L L++++ L + ++ L + Sbjct: 119 ------NEVIGFLDVRLDLSALDQRIAQIYGLWAVLSCLLVVICLTLAWLIGTRLGR 169 >UniRef50_A0Y8S5 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y8S5_9GAMM Length = 481 Score = 47.8 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 71/186 (38%), Gaps = 28/186 (15%) Query: 1 MARTKLKFRLHRA-------VIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLA 53 M + +L + + ++ C + + AS S Q + QL +L Sbjct: 68 MLKDQLTTKFLQLSIPQKASLLCAMCCFSVALCVVAASHISDKQLIQISGQLY--GESLT 125 Query: 54 RQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRL 113 RQ+ + + + D+ +Q++L++L + + +YD + +LIA +G Sbjct: 126 RQLARDASKPLVQG--DKLSLQSLLNKLVESPIVTRGSIYDLENNLIADAGN-------- 175 Query: 114 ALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSL 173 Q I I ++ GY +TLD L + + + ++ L+ +LS Sbjct: 176 -------IRRKAQSISASITFQDSIAGYAVMTLDATLLLQQVNRA--SWQLISLVFVLSG 226 Query: 174 AIGVVL 179 + Sbjct: 227 LSFFLC 232 >UniRef50_A3Y5R2 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y5R2_9GAMM Length = 479 Score = 46.6 bits (109), Expect = 5e-04, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 77/183 (42%), Gaps = 12/183 (6%) Query: 6 LKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRN--PQLEELARTLARQVTLNVAPL 63 ++ +L +++ L L+ + W + + + Q E L +LA Q N Sbjct: 14 IEQKLSASIVTLLTFLSLMLITLALFWVTITNTLESYLTQQTEVLGSSLATQAAFNATQS 73 Query: 64 MRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLI--ARSGESVEVRDRLALDGKKAG 121 + T+ D + +L +L + IL A V+++Q +L+ A S S + D + Sbjct: 74 ILTN--DLLSLNVLLTRLVVDENILSARVFNKQDELLAEASSDNSSYLN-----DSNISA 126 Query: 122 GYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLML-LLSLAIGVVLT 180 + + + +G++ +TLD ++++ + + + LSL I ++T Sbjct: 127 VENKRVFSSSVKFRQEVVGHVIITLDKTPTQNILSRLNSLLISVSIFITALSLLIVFLVT 186 Query: 181 RTL 183 R L Sbjct: 187 RKL 189 >UniRef50_Q1YQI9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQI9_9GAMM Length = 399 Score = 46.6 bits (109), Expect = 6e-04, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 65/190 (34%), Gaps = 15/190 (7%) Query: 7 KFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRT 66 ++ L + + L A L+ + G + S + L+E Q+ V + Sbjct: 4 QYSLAKKLPALVLSACLIFGLFGWALLSSYASQLSQETLQEKGDLTINQLVELVRGPLFN 63 Query: 67 DSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQ 126 D IQ L + ++ ILDA VYD G LIA+S Sbjct: 64 G--DSISIQVALQNVAEDRIILDASVYDIGGQLIAQS------------KKPAPETSIPI 109 Query: 127 QIVEPIAGKNGPLGYLRLTLDTHTLATEAQQ-VDNTTNILRLMLLLSLAIGVVLTRTLLQ 185 IA + G + +++D+ + Q V N + + LLS L + Sbjct: 110 SFSRNIALQETQAGKVLISIDSRAIQQRHSQVVSNWLMLWAVFTLLSSYGCFRFAEQLSR 169 Query: 186 GKRTRWQQSP 195 R + P Sbjct: 170 RLRMLTNRLP 179 >UniRef50_Q39QV4 Sensor protein n=9 Tax=Desulfuromonadales RepID=Q39QV4_GEOMG Length = 484 Score = 45.1 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 78/196 (39%), Gaps = 22/196 (11%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPL 63 L RL ++ L +A+L + +Q Q + +++E + + + + +++ L Sbjct: 1 MTLNTRLVMIMLTLLVIAILTLF-----FLNQYSQNEMVQEIQESSTMVTKALQMSIEDL 55 Query: 64 MRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDR----------L 113 PD R+ L + + + ++ +G++I S + + R + Sbjct: 56 TSEYEPDRGRLTEYLKE-AKVKGVKEINIFSNEGEIIDSSNPAKIGKKREIKKLEKGLKV 114 Query: 114 ALDGKKAGGYFN-QQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLS 172 + K G +V P+ + LGY+++ L + T + N + ++ S Sbjct: 115 SPGTKTDAGSSRAYDLVVPVIVGDEQLGYVQINLLLDNIRTIQHE-----NFVNRVVATS 169 Query: 173 LAIGVVLTRTLLQGKR 188 L + ++ T+ KR Sbjct: 170 LVFLLGISLTIFLAKR 185 >UniRef50_D2L920 Hpt sensor hybrid histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L920_9DELT Length = 963 Score = 45.1 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 61/144 (42%), Gaps = 21/144 (14%) Query: 64 MRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSG------------ESVEVRD 111 + S + + + IL +L +++A ++D +G L++ +G E++ Sbjct: 62 LLHQSAELEAARDILGRLVRVEGVVEASLFDGRGTLVSSAGLFPPPPLRADPGEALPAGR 121 Query: 112 RLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLL 171 A+ G G + +VEPI G+ LG+LRL + ++ + L+ + Sbjct: 122 VYAVQG--EAGKLSAILVEPIRGQGETLGFLRL----RYAMRDLSALNRH---VWLVFAV 172 Query: 172 SLAIGVVLTRTLLQGKRTRWQQSP 195 ++A + TLL R+ P Sbjct: 173 AVAGAYLFLATLLNILLHRFVLKP 196 >UniRef50_A3WNV0 Uncharacterized conserved membrane protein, smp family protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WNV0_9GAMM Length = 215 Score = 44.7 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 74/187 (39%), Gaps = 12/187 (6%) Query: 8 FRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTD 67 RL R + L L+ ++ + N +Q+ Q T + + T+ Sbjct: 32 KRLLRFMAAAALLTLMYSIWN----IATNQAQQQLEQNTREHLNWVLSQTAAGSQVFLTN 87 Query: 68 SPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQ 127 +++ +Q ++ +L ++ +L + D G G++ + +D Sbjct: 88 G-NQEGLQQLIIRLNEQPGVLAVTLRDAAGINQFSVGQTSSI-----IDYPSTLPE-PWV 140 Query: 128 IVEPIAGKNGPLGYLRLTLDT-HTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQG 186 +V PI + GYL++T D L + + T+ + +LLL+L G ++ + Sbjct: 141 LVHPIGDEFDDQGYLQVTFDKNQILDANEKTLLGLTSQGKTLLLLALITGGLIVLGFNRI 200 Query: 187 KRTRWQQ 193 + RW + Sbjct: 201 RDRRWVK 207 >UniRef50_D0M8D2 GGDEF family protein n=4 Tax=Vibrio RepID=D0M8D2_VIBSE Length = 652 Score = 44.7 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 65/181 (35%), Gaps = 9/181 (4%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 L +I + + + + S + +L E R L V+ ++ + T + Sbjct: 3 LRAKLIWPILVFITAIFVISKGYTSYTAYQSSKHELVEQTRKLINNVSFSIKDALTTKNK 62 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQG---DLIARSGESVEVRDRLALDGKKAGGYFNQ 126 + Q L ++ + +YD+ ++ SG S V ++ A GY Sbjct: 63 QKA--QTTLINFLNQPNVTRVKLYDQDDQPFVVLEGSGVSAPVPNQTERSKLHALGYALS 120 Query: 127 Q----IVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRT 182 ++EPI +G +R+TL + Q + +L L+L I + Sbjct: 121 AKFLYVLEPIIHDGRVIGSMRVTLSHRPIIEAQQSLLQDGAVLLLLLFAGGTIFYISINK 180 Query: 183 L 183 L Sbjct: 181 L 181 >UniRef50_A6B380 FOG ggdef domain n=6 Tax=Vibrio RepID=A6B380_VIBPA Length = 656 Score = 44.3 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 12/183 (6%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 L +I + + + + S + +L E R L V+ ++ + T Sbjct: 3 LRAKLIWPILVFITAIFVASKGYTSYTAYQSSKHELVEQTRKLINNVSYSIKDALTT--K 60 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQGDL---IARSGESVEV---RDRLALDGKK-AGG 122 ++++ Q IL L ++ + +YD +L + SGES V +R LD A Sbjct: 61 NKRKAQTILADLIEQPNVSRVKLYDRANELFVLLEGSGESAPVPNQNERSKLDALGYALS 120 Query: 123 YFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRT 182 ++EPI + +G +R+TL + ++LL+ A G++ T Sbjct: 121 AKFLYVLEPIIHEGHVIGSIRVTLSYIPIINAQHSF---LKDAGVLLLILAAGGIIFYIT 177 Query: 183 LLQ 185 + + Sbjct: 178 IDR 180 >UniRef50_D2YAM3 Signal transduction histidine kinase regulating citrate/malate metabolism n=4 Tax=Vibrio mimicus RepID=D2YAM3_VIBMI Length = 523 Score = 44.0 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 80/230 (34%), Gaps = 23/230 (10%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M + + + VL C+A + + + QR Q+ A+ A Q+ Sbjct: 4 MPSRMIPRTFTQQLTVLLCVAFVAGAAVWWWFSADKIQRLMTNQIALRAQVQAAQLATFP 63 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDA---GVYDEQGDLIARSGESVEVRDRLALDG 117 + + D +++ +++ L + DA V D G +A S + D Sbjct: 64 ELIEAVAARDTEQVSYLVESLQS---VTDADFITVSDLAGIRLAHPIASRIGLPVMGDDI 120 Query: 118 KKAGGYFNQQI-------------VEPIAGKNG-PLGYLRLTLDTHTLATEAQQVDNTTN 163 + A + + PI NG +G +++ T+A + Sbjct: 121 RPALEEGKAYLSYSVGSMGPSLRYISPIRATNGDIIGMIKVGYLLDTVAVWQSEKLQPLL 180 Query: 164 ILRLM-LLLSLAIGVVLTRTLLQGKRTR--WQQSPFLLTASKPVPEEEES 210 ++ M LLL+ I R + + + R WQ + L+T + E Sbjct: 181 MVGGMTLLLATLISTAFARLVRRQMQDREPWQLAQSLMTYEGVIQATHEG 230 >UniRef50_C4XQ28 Sensor protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XQ28_DESMR Length = 1069 Score = 43.6 bits (101), Expect = 0.005, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 63/180 (35%), Gaps = 18/180 (10%) Query: 29 GASWFSQNHQR-QRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRI 87 G S + + L LA +APL++T Q ILD++ + Sbjct: 27 GVLHLSIQDRLEAARTRTRTLLGVLAAHRLEALAPLLQTAQAISAA-QVILDRMVQVDGV 85 Query: 88 LDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFN------------QQIVEPIAGK 135 ++A ++ G L+A +G LA A ++EPI G+ Sbjct: 86 IEASLFSAAGILLADAGTGAPA--PLASQTDGALPETRIFSVTAENDHLLATLIEPIHGE 143 Query: 136 NGPLGYLRLTLDTHTLATEAQQVDNTTNI--LRLMLLLSLAIGVVLTRTLLQGKRTRWQQ 193 G+LRL A +V + + L+L + +L +L+ T Q Sbjct: 144 GEIAGFLRLRYALKDSALTGGRVWTIFGLAVAGAYVFLALVLNAMLHLFVLRPVNTLRQA 203 >UniRef50_B7J3C7 Sensor protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J3C7_ACIF2 Length = 531 Score = 42.8 bits (99), Expect = 0.008, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 80/197 (40%), Gaps = 18/197 (9%) Query: 4 TKLKFRLHRAVIVLFCLALLV--ALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 +L R + VL +A + ++ + +N ++Q + ++ L+R LAR + Sbjct: 68 RRLSVRSKSIIFVLMLIAGIYGTIVLFLYTAVERNMEKQIHSKVLHLSRGLARDAADPLL 127 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG 121 S + + +++Q+ + I A + D+QG +A + + G Sbjct: 128 ------SENSNTLIKLVEQVENNPLIRHAIITDQQGLTVASTQ-----STAIGRQGLVPT 176 Query: 122 GYFNQQIVEPIAGKNGPLGYLRLTLDTHTLAT-EAQQVDNTTNILRLMLLLSLAIGV--- 177 ++ PI + LGY+ L + + + ++D L + +++ IG+ Sbjct: 177 NLEREEFTAPIRAGSHILGYVSLRANNDVIQSIVDTRMDLAIRRLSFLGMITAFIGLIGA 236 Query: 178 -VLTRTLLQGKRTRWQQ 193 +++ T + R Q+ Sbjct: 237 SLISNTFTRPIRRLSQK 253 >UniRef50_B8GMD2 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMD2_THISH Length = 487 Score = 42.8 bits (99), Expect = 0.008, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 15/178 (8%) Query: 11 HRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPD 70 + + + LA+LV + GA +Q+ Q R Q E TLARQ+ L+ + D Sbjct: 26 WKLALTIAALAVLVMGILGAILLAQHTQTLRA-QAEGFGETLARQLAGTSVELVL--AED 82 Query: 71 EKRIQAILDQLTDESRILDAGVYD---EQGDLIARSGESVEVRDRLALDGKKAGGYFNQQ 127 + + A+++ L I A + D +V + + Sbjct: 83 QLALAALVNNLAQSDGISGATILDANGAAIAQAGAQPAQGQVSEPWGQGRRWLLAESG-- 140 Query: 128 IVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQ 185 EP+A PL + L L + ++ TT ++L G L LL Sbjct: 141 --EPVASHRAPLRFQELELGQAVVTHSLAPLEATTRR-----AVALVTGATLIMALLA 191 >UniRef50_A2P3N3 Signal transduction histidine kinase regulating citrate/malate metabolism n=8 Tax=Vibrio RepID=A2P3N3_VIBCH Length = 520 Score = 42.4 bits (98), Expect = 0.011, Method: Composition-based stats. Identities = 39/230 (16%), Positives = 79/230 (34%), Gaps = 23/230 (10%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M + + + +L C A + + + QR + Q+ A+ A Q+ Sbjct: 1 MPSRMIPRTFTQQLTLLLCSAFAAGALVWWWFSADKIQRLMSHQIALRAQVQAVQLAQYP 60 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDA---GVYDEQGDLIARSGESVEVRDRLALDG 117 + + D K++ ++ L + DA V D QG +A + + D Sbjct: 61 DLIEAVNKRDAKQVSQLVQALQS---VTDADFITVSDRQGIRLAHPITARIGLPVMGDDI 117 Query: 118 KKAGGYFNQQI-------------VEPI-AGKNGPLGYLRLTLDTHTLATEAQQVDNTTN 163 + A + + PI A +G +++ T+A + Sbjct: 118 RPALDEGKAYLSYSVGSMGPSLRYISPIRAANGDVIGMIKVGYLLDTVAVWQNEKLQPLL 177 Query: 164 ILRLM-LLLSLAIGVVLTRTLLQGKRTR--WQQSPFLLTASKPVPEEEES 210 ++ + LLL+ I R + + + R WQ + L+T + E Sbjct: 178 LVAGITLLLATLISTAFARLVRRQMQDREPWQLAQSLMTYEGVIQATHEG 227 >UniRef50_A6EVW8 Sensor protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EVW8_9ALTE Length = 484 Score = 41.6 bits (96), Expect = 0.020, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 26/186 (13%) Query: 15 IVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRI 74 I L C +L+ +QN+++Q +L +A LA Q + D +++ Sbjct: 26 ITLVCASLIFV-------ENQNYRKQLESELHVIAGILAEQSAAALV------FEDNEQL 72 Query: 75 QAILDQLTDESRILDAGVYDEQGDLIAR-SGESVEVRDRLALDGKKAGGYFNQQIVEPIA 133 +I+ L I A VY++QGD++ SG + + Q++ P+ Sbjct: 73 SSIITSLKRIDTIRQACVYNQQGDVMTSLSGRPQGQCPSVGSSLEVGFVGDVYQLLMPVT 132 Query: 134 GKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIG--VVLTRTLLQGKRTRW 191 N +G L L + ++ +R + ++ IG +++ L + R Sbjct: 133 LDNEVVGQLFL----------SSHLEVLRGHIRTFVSVASGIGAVILIALVFLALRLQRI 182 Query: 192 QQSPFL 197 P L Sbjct: 183 VSEPIL 188 >UniRef50_A4J6D4 Putative methyl-accepting chemotaxis sensory transducer n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J6D4_DESRM Length = 360 Score = 41.3 bits (95), Expect = 0.020, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 65/170 (38%), Gaps = 21/170 (12%) Query: 12 RAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDE 71 + + + L +L+ + G + + ++ + + AR + A +R +P+ Sbjct: 21 KLSLSITLLVMLLMICIGINSY-LRNRTILLQEAQSRGWMTARTTSAFAADYLRGYNPNL 79 Query: 72 KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA----------- 120 + I+D L + I + D G ++ S ES+ + + ++A Sbjct: 80 QS--NIIDHLERDPFIKRVAILDINGVVLKSSDESMVQKKMTGQEVQEALIQKKDTLKYI 137 Query: 121 ----GGYFNQQIVEPIAGKNG-PLGYLRLTLDTHTLATEAQQVDNTTNIL 165 G + + P+A +N PLGY + D + A ++ N + Sbjct: 138 SDIKGHPLTMEFISPVAARNEAPLGYFWIEADLTYI--SAHLINTARNQI 185 >UniRef50_B4RXD9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Alteromonas macleodii RepID=B4RXD9_ALTMD Length = 673 Score = 41.3 bits (95), Expect = 0.022, Method: Composition-based stats. Identities = 22/175 (12%), Positives = 62/175 (35%), Gaps = 11/175 (6%) Query: 20 LALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILD 79 +A+L + + + + + L+ + L ++ LM+ + + + ++ Sbjct: 1 MAILATSIAIVNKLEHSESVMTV--VADNTAALSNSLALQLSILMQKNPGNNALLSSVFQ 58 Query: 80 QLTDESRILDAGVYDEQGDLIA--RSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKN- 136 + + +L A +YD +I+ + +S++ D + + Q + I Sbjct: 59 PVKEHPYLLSATLYDNDYRVISTVQPKQSLKFDDEAVPTSPENVPFGIAQYEDVITAHQI 118 Query: 137 -----GPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQG 186 P+G+L + +DT+ + + + +L L + Sbjct: 119 IGSSLYPMGHLVIYVDTNEVKA-SNSTRQLIKQVPFILAFWLLCTGTCFFIFYRL 172 >UniRef50_C8WZC3 Sensor protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZC3_DESRD Length = 525 Score = 40.9 bits (94), Expect = 0.027, Method: Composition-based stats. Identities = 46/228 (20%), Positives = 83/228 (36%), Gaps = 28/228 (12%) Query: 5 KLKFRLHRAVIVLFCLALL--VALMQGASWFSQNHQRQRNPQLEELARTLARQVT--LNV 60 +LKF+ VI L + ++ +F + + + LAR +AR+ L + Sbjct: 11 QLKFKNKFLVITLANIIVVLAAFSFVVDDYFKKRISQNQEENNLSLARNMARESVDPLLI 70 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGES-------VEVRDRL 113 ++ D + +A+ L + ILD G ++A S +S + Sbjct: 71 HDYLQLDVLVQSTKEAL---LCKYAYILD-----HHGRVVAHSDKSRLGQKYSPPSTEEQ 122 Query: 114 ALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSL 173 + +K G Q PI + LGY + +D + QQ + + L++ +SL Sbjct: 123 YIRDRKVAGVMYQDYFLPIRVRGELLGYAVVGIDRNKETAVIQQSLHGLRLRLLIVAVSL 182 Query: 174 AIGVVLTRTLLQGKRTR---------WQQSPFLLTASKPVPEEEESEK 212 LT + L + TR Q L P+P + Sbjct: 183 FAFTALTASYLASRLTRRIGDLKQSMRQVQQGDLNVQLPLPRASSCKD 230 >UniRef50_Q15SP2 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15SP2_PSEA6 Length = 548 Score = 40.5 bits (93), Expect = 0.041, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 71/196 (36%), Gaps = 8/196 (4%) Query: 12 RAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDE 71 R ++V+ A + ++ + + Q+ L L + + + D Sbjct: 16 RLLLVIVLGASVFSIGASVAAYYLGQQKAIETSLASLNDLT---QAVEKTVAIGAYASDL 72 Query: 72 KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEP 131 ++ +++ L S + VY G ++ +S E V +D A + ++ + Sbjct: 73 VLLEEVVEGLARNSLVARVEVYSNNGQILLQSAE---VESAANIDSLPARSPYIERALYS 129 Query: 132 IAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRW 191 +G +R+ +A +++ T ++ M++ + + ++L + Sbjct: 130 PFDAEERIGAIRIFAQPAHIAAASRKEAMTLTVM--MIIQASVLALLLYAVVTFLISRPI 187 Query: 192 QQSPFLLTASKPVPEE 207 Q L A +P E Sbjct: 188 TQLAISLRAMRPGTHE 203 >UniRef50_B3E2P6 Sensor protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E2P6_GEOLS Length = 767 Score = 40.5 bits (93), Expect = 0.042, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 70/190 (36%), Gaps = 14/190 (7%) Query: 6 LKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMR 65 L+ R+ + ++ + + + ++ ++ + Q AR L +++ + + Sbjct: 14 LQRRMVAGMTLVMAITMSLFVLD----MTRRQEAVALQQHVLQARALT--QSVSASSAVW 67 Query: 66 TDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFN 125 S D +Q I+ L + A V D +G ++A S L + Sbjct: 68 VASRDYSGLQEIIAALEHYPNLAHAIVLDSRGQVLAHSDRKRIGLYLTGLPDQPLLQVLQ 127 Query: 126 QQI-----VEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT 180 + I PI P+G++R+ L+ L + ++ + L ++ +G +L Sbjct: 128 KTIRMVDVASPILLGGKPIGWVRIGLNGKGLEADIAEIHRNG---LIFALAAVMLGALLA 184 Query: 181 RTLLQGKRTR 190 + R Sbjct: 185 VLTGRYLTRR 194 >UniRef50_Q1ILH4 Sensor protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILH4_ACIBL Length = 631 Score = 39.3 bits (90), Expect = 0.087, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 79/222 (35%), Gaps = 41/222 (18%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M R +LK +L A+ + + S QR +AR++ Sbjct: 1 MRRIRLKTKLVIAISAMVFALVATLSYLYVSQL----VLQRIRSAYNNGDFVAREIRDAA 56 Query: 61 APLMRT-------DSPDEKRIQAIL-DQLTDESRI--------------LDAGVYDEQGD 98 + + D +I+A++ D L + + DAG+YD Sbjct: 57 RDAVAVDLRNTDINPSDSAKIRAVIADSLQTDPGVNTLLQSIVGYSPTTYDAGIYDRDDR 116 Query: 99 LIARSGESVE---VRDRLALDGKKAGGYFNQQIVE-----------PIAGKNGPLGYLRL 144 ++ + S+ V R + G +F Q V PI P G +R+ Sbjct: 117 VLVHTDSSLLDKVVHSREDFAQVRDGSFFRQMNVVYGKPEVYDIHLPIQRDGKPFGDIRI 176 Query: 145 TLDTHTLATEAQ-QVDNTTNILRLMLLLSLAIGVVLTRTLLQ 185 + T L +E + Q++ + + +L+S + VL+ L+ Sbjct: 177 GVSTVFLKSELRPQLNRALTLSIVCVLVSFLLAAVLSNLALR 218 >UniRef50_C8WZA5 Sensor protein n=2 Tax=Desulfohalobiaceae RepID=C8WZA5_DESRD Length = 475 Score = 39.3 bits (90), Expect = 0.097, Method: Composition-based stats. Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 16/153 (10%) Query: 7 KFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQ------VTLNV 60 F+L + + +L ++ A + ++ + + A LA + Sbjct: 12 PFQLVKFLSWSSLFIILGSIFFLALTIGNSAKQAVMQKHRDFALLLAENLNHQIYQRFTL 71 Query: 61 APLM------RTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLA 114 ++ + +R++ + +LD +YD +G ++ + + + + Sbjct: 72 PTVLGFGRIQLKNEAQYQRLEETIQSTIHSFHVLDVRIYDWEGMVVYSTDK--TLVGKAG 129 Query: 115 LDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLD 147 L G + + EP G L + R D Sbjct: 130 LAGPEVKKAVDTG--EPSFTVQGELSFWRAMFD 160 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0ATM0 Putative uncharacterized protein n=2 Tax=Enterob... 194 2e-48 UniRef50_D1P6F8 Protein smp n=2 Tax=Providencia RepID=D1P6F8_9ENTR 190 3e-47 UniRef50_B6X9Y1 Putative uncharacterized protein n=2 Tax=Provide... 183 5e-45 UniRef50_C6ALY5 Protein AhpA n=4 Tax=Pasteurellaceae RepID=C6ALY... 157 2e-37 UniRef50_B8F5V9 AphA-like protein/membrane protein affecting hem... 150 3e-35 UniRef50_A6VR58 Membrane protein n=1 Tax=Actinobacillus succinog... 143 5e-33 UniRef50_Q9L8J3 Protein ahpA n=6 Tax=Pasteurellaceae RepID=AHPA_... 140 3e-32 UniRef50_D0I7W5 Putative SerB-cotransposed membrane protein n=1 ... 136 4e-31 UniRef50_B5FAA2 SMP protein n=2 Tax=Vibrio fischeri RepID=B5FAA2... 135 1e-30 UniRef50_B6ENG7 Peripheral membrane protein n=1 Tax=Aliivibrio s... 134 2e-30 UniRef50_D0LZV9 Smp-like protein n=52 Tax=Vibrionales RepID=D0LZ... 129 7e-29 UniRef50_Q3IDP2 Putative uncharacterized protein n=2 Tax=Alterom... 120 3e-26 UniRef50_A6VUV9 Putative uncharacterized protein n=1 Tax=Marinom... 119 6e-26 UniRef50_A4C6X0 Putative uncharacterized protein n=1 Tax=Pseudoa... 116 4e-25 UniRef50_Q5QXU3 Uncharacterized conserved membrane protein, smp ... 116 7e-25 UniRef50_B0TQ87 Membrane protein n=21 Tax=Shewanella RepID=B0TQ8... 112 1e-23 UniRef50_Q1YQI9 Putative uncharacterized protein n=1 Tax=gamma p... 109 8e-23 UniRef50_D0M8D2 GGDEF family protein n=4 Tax=Vibrio RepID=D0M8D2... 106 5e-22 UniRef50_A3WNV0 Uncharacterized conserved membrane protein, smp ... 101 2e-20 UniRef50_A1SXG3 Putative uncharacterized protein n=1 Tax=Psychro... 98 2e-19 UniRef50_A0Y8S5 Putative uncharacterized protein n=1 Tax=marine ... 98 2e-19 UniRef50_A3Y5R2 Putative uncharacterized protein n=1 Tax=Marinom... 97 4e-19 UniRef50_Q39QV4 Sensor protein n=9 Tax=Desulfuromonadales RepID=... 97 4e-19 UniRef50_Q487B3 Putative uncharacterized protein n=1 Tax=Colwell... 96 1e-18 UniRef50_Q1N0U5 Putative uncharacterized protein n=1 Tax=Bermane... 95 1e-18 UniRef50_A4SRU0 Putative SerB-cotransposed membrane protein n=1 ... 91 2e-17 UniRef50_A6F6B1 Putative uncharacterized protein n=1 Tax=Moritel... 86 6e-16 UniRef50_D2L920 Hpt sensor hybrid histidine kinase n=1 Tax=Desul... 83 6e-15 UniRef50_C1DLN8 HAMP domain protein n=1 Tax=Azotobacter vineland... 81 3e-14 UniRef50_Q9EYZ3 SerB-cotransposed membrane protein (Fragment) n=... 71 2e-11 Sequences not found previously or not previously below threshold: UniRef50_A6B380 FOG ggdef domain n=6 Tax=Vibrio RepID=A6B380_VIBPA 94 4e-18 UniRef50_Q4ZYZ6 Histidine kinase, HAMP region n=20 Tax=Pseudomon... 71 3e-11 UniRef50_Q1I431 Putative uncharacterized protein n=1 Tax=Pseudom... 69 1e-10 UniRef50_B9ZKI9 Adenylate/guanylate cyclase with integral membra... 66 6e-10 UniRef50_C4XQ28 Sensor protein n=1 Tax=Desulfovibrio magneticus ... 62 2e-08 UniRef50_Q15R37 Putative uncharacterized protein n=1 Tax=Pseudoa... 60 7e-08 UniRef50_Q0VSG5 Specificity unclear n=2 Tax=Alcanivorax RepID=Q0... 59 7e-08 UniRef50_B3E2P6 Sensor protein n=1 Tax=Geobacter lovleyi SZ RepI... 58 2e-07 UniRef50_B7J3C7 Sensor protein n=2 Tax=Acidithiobacillus ferroox... 56 7e-07 UniRef50_Q478B9 Sensor protein n=1 Tax=Dechloromonas aromatica R... 55 1e-06 UniRef50_Q21LU3 Putative uncharacterized protein n=1 Tax=Sacchar... 54 2e-06 UniRef50_C4KCR0 Diguanylate cyclase n=1 Tax=Thauera sp. MZ1T Rep... 54 5e-06 UniRef50_A1U1I2 Sensor protein n=2 Tax=Marinobacter RepID=A1U1I2... 53 7e-06 UniRef50_C8WZC3 Sensor protein n=1 Tax=Desulfohalobium retbaense... 53 8e-06 UniRef50_A0Y7P2 Adenylate/guanylate cyclase n=1 Tax=marine gamma... 53 8e-06 UniRef50_A4BIA0 Adenylate/guanylate cyclase n=1 Tax=Reinekea bla... 53 8e-06 UniRef50_D2L5Y5 PAS/PAC sensor signal transduction histidine kin... 52 9e-06 UniRef50_C7LNA9 Sensor protein n=1 Tax=Desulfomicrobium baculatu... 52 1e-05 UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Th... 52 2e-05 UniRef50_A3UW13 GGDEF domain n=4 Tax=root RepID=A3UW13_VIBSP 51 3e-05 UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group Rep... 51 3e-05 UniRef50_C7RL13 Diguanylate cyclase/phosphodiesterase with extra... 51 4e-05 UniRef50_C6NZY9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=... 50 4e-05 UniRef50_Q087E2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Al... 50 4e-05 UniRef50_B3E836 Sensor protein n=1 Tax=Geobacter lovleyi SZ RepI... 50 5e-05 UniRef50_A1VE11 Diguanylate cyclase/phosphodiesterase with PAS/P... 50 7e-05 UniRef50_Q67JE7 Two-component sensor histidine kinase n=1 Tax=Sy... 49 8e-05 UniRef50_C6BXC4 Sensor protein n=1 Tax=Desulfovibrio salexigens ... 49 1e-04 UniRef50_D0MEG5 Sensor protein n=1 Tax=Rhodothermus marinus DSM ... 49 2e-04 UniRef50_C8PXS8 Putative uncharacterized protein n=1 Tax=Enhydro... 48 2e-04 UniRef50_A6EVW8 Sensor protein n=1 Tax=Marinobacter algicola DG8... 48 2e-04 UniRef50_A0L8N5 Sensor protein n=3 Tax=cellular organisms RepID=... 48 2e-04 UniRef50_UPI0000E0E132 hypothetical protein GHTCC_09125 n=1 Tax=... 48 2e-04 UniRef50_A1TTM1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Ac... 48 2e-04 UniRef50_B8FK56 Sensor protein n=1 Tax=Desulfatibacillum alkeniv... 48 2e-04 UniRef50_Q2LRV4 HD domain / HAMP domain protein n=1 Tax=Syntroph... 48 3e-04 UniRef50_B3PCQ1 Putative uncharacterized protein n=1 Tax=Cellvib... 47 3e-04 UniRef50_A6LPJ4 Sensor protein n=3 Tax=Clostridium RepID=A6LPJ4_... 47 4e-04 UniRef50_A4J6D4 Putative methyl-accepting chemotaxis sensory tra... 47 4e-04 UniRef50_UPI0001C421AE two-component sensor histidine kinase n=1... 47 5e-04 UniRef50_Q1D8X3 Methyl accepting chemotaxis protein n=3 Tax=Myxo... 47 6e-04 UniRef50_B8GMD2 Putative uncharacterized protein n=1 Tax=Thioalk... 46 7e-04 UniRef50_B4RY75 Sensor protein n=1 Tax=Alteromonas macleodii 'De... 46 9e-04 UniRef50_A1HU07 Integral membrane sensor signal transduction his... 46 0.001 UniRef50_Q2BR48 Gamma-glutamyl phosphate reductase n=1 Tax=Neptu... 46 0.001 UniRef50_A4BE47 Putative uncharacterized protein n=1 Tax=Reineke... 46 0.001 UniRef50_A0LD45 Sensor protein n=1 Tax=Magnetococcus sp. MC-1 Re... 46 0.001 UniRef50_A2P3N3 Signal transduction histidine kinase regulating ... 46 0.001 UniRef50_Q02A70 Sensor protein n=1 Tax=Candidatus Solibacter usi... 45 0.002 UniRef50_D0KWM5 Serine/threonine protein kinase n=1 Tax=Halothio... 45 0.002 UniRef50_Q2BN03 Sensory box sensor/GGDEF/EAL domain protein n=1 ... 45 0.002 UniRef50_B8CL71 Sensor protein n=1 Tax=Shewanella piezotolerans ... 45 0.002 UniRef50_B8G173 Histidine kinase n=2 Tax=Desulfitobacterium hafn... 45 0.002 UniRef50_UPI0001745085 sensor protein fixL n=1 Tax=Verrucomicrob... 45 0.002 UniRef50_Q1N5D6 Adenylate cyclase n=1 Tax=Bermanella marisrubri ... 45 0.002 UniRef50_A0R7L5 Integral membrane sensor signal transduction his... 45 0.002 UniRef50_Q2SJ16 Sensor protein n=1 Tax=Hahella chejuensis KCTC 2... 45 0.002 UniRef50_A3WNQ9 Sensor protein n=2 Tax=Idiomarina RepID=A3WNQ9_9... 45 0.002 UniRef50_A3VNZ2 Sensor protein n=1 Tax=Parvularcula bermudensis ... 45 0.002 UniRef50_A5G489 Sensor protein n=3 Tax=Geobacter RepID=A5G489_GEOUR 45 0.002 UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax... 44 0.002 UniRef50_C7R6K1 Serine/threonine protein kinase n=1 Tax=Kangiell... 44 0.003 UniRef50_Q1JWJ6 Sensor protein n=1 Tax=Desulfuromonas acetoxidan... 44 0.003 UniRef50_A8H2H2 Sensor protein n=5 Tax=Shewanella RepID=A8H2H2_S... 44 0.003 UniRef50_Q1IT59 Sensor protein n=1 Tax=Candidatus Koribacter ver... 44 0.004 UniRef50_C8WK19 Sensor protein n=3 Tax=Coriobacteriaceae RepID=C... 44 0.004 UniRef50_D2YAM3 Signal transduction histidine kinase regulating ... 44 0.004 UniRef50_B7KKG7 Sensor protein n=4 Tax=Cyanobacteria RepID=B7KKG... 44 0.004 UniRef50_A0Y0H9 Sensor histidine kinase n=1 Tax=Alteromonadales ... 44 0.004 UniRef50_Q5R050 Sensor protein n=2 Tax=Idiomarina RepID=Q5R050_I... 43 0.006 UniRef50_Q5ZU95 Sensor protein n=6 Tax=Legionella RepID=Q5ZU95_L... 43 0.006 UniRef50_B7RXE0 Sensor protein n=1 Tax=marine gamma proteobacter... 43 0.006 UniRef50_A5G5A8 Metal dependent phosphohydrolase n=1 Tax=Geobact... 43 0.006 UniRef50_Q0A9X1 Serine phosphatase n=1 Tax=Alkalilimnicola ehrli... 43 0.007 UniRef50_Q478G8 Sensor protein n=1 Tax=Dechloromonas aromatica R... 43 0.008 UniRef50_B1ZVH0 Sensor protein n=1 Tax=Opitutus terrae PB90-1 Re... 43 0.008 UniRef50_C5BNT3 Putative membrane protein n=1 Tax=Teredinibacter... 43 0.008 UniRef50_A6GTC4 Sensor protein n=1 Tax=Limnobacter sp. MED105 Re... 42 0.010 UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/P... 42 0.012 UniRef50_B9LZJ6 Metal dependent phosphohydrolase n=1 Tax=Geobact... 42 0.013 UniRef50_C7R6I8 Putative uncharacterized protein n=1 Tax=Kangiel... 42 0.014 UniRef50_C5CZH7 Diguanylate cyclase n=1 Tax=Variovorax paradoxus... 42 0.015 UniRef50_B4RXD9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Al... 42 0.015 UniRef50_Q12RH2 Sensor protein n=1 Tax=Shewanella denitrificans ... 42 0.015 UniRef50_B4S2L1 Sensor protein n=3 Tax=Alteromonadales RepID=B4S... 42 0.015 UniRef50_D0XZE5 Sensor protein n=1 Tax=Caulobacter segnis ATCC 2... 42 0.016 UniRef50_B8DQH2 Sensor protein n=1 Tax=Desulfovibrio vulgaris st... 42 0.017 UniRef50_B3E6P9 Sensor protein n=1 Tax=Geobacter lovleyi SZ RepI... 41 0.020 UniRef50_Q55838 Sensor protein n=1 Tax=Synechocystis sp. PCC 680... 41 0.020 UniRef50_C8WZA5 Sensor protein n=2 Tax=Desulfohalobiaceae RepID=... 41 0.020 UniRef50_A0PYF6 Sensor protein n=2 Tax=Clostridium RepID=A0PYF6_... 41 0.023 UniRef50_C0QF75 Sensor protein n=1 Tax=Desulfobacterium autotrop... 41 0.023 UniRef50_Q5WGW0 Sensor protein n=1 Tax=Bacillus clausii KSM-K16 ... 41 0.034 UniRef50_Q08V63 Sensor protein n=1 Tax=Stigmatella aurantiaca DW... 41 0.036 UniRef50_A1W3H9 Sensor protein n=1 Tax=Acidovorax sp. JS42 RepID... 40 0.045 UniRef50_UPI0001699252 hypothetical protein Epers_05292 n=1 Tax=... 40 0.047 UniRef50_B2JLF0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Bu... 40 0.048 UniRef50_C0GRI4 Sensor protein n=1 Tax=Desulfonatronospira thiod... 40 0.048 UniRef50_B8K775 Putative sensor protein CitS n=2 Tax=Vibrionacea... 40 0.052 UniRef50_Q2SQE9 Sensor protein n=1 Tax=Hahella chejuensis KCTC 2... 40 0.056 UniRef50_Q6LIJ7 Sensor protein n=3 Tax=Photobacterium profundum ... 40 0.059 UniRef50_B2TPL4 Hypothetical Methyl-accepting chemotaxis protein... 40 0.060 UniRef50_B4S142 Sensor protein n=5 Tax=Alteromonadales RepID=B4S... 40 0.064 UniRef50_Q1NX05 Sensor protein n=1 Tax=delta proteobacterium MLM... 40 0.064 UniRef50_Q39V26 Sensor protein n=1 Tax=Geobacter metallireducens... 40 0.068 UniRef50_A4VGG8 Sensor protein n=1 Tax=Pseudomonas stutzeri A150... 39 0.091 >UniRef50_C0ATM0 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C0ATM0_9ENTR Length = 246 Score = 194 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 117/216 (54%), Positives = 153/216 (70%), Gaps = 3/216 (1%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M + KLKF+L + I+L C+ALL LMQGAS+FS+ +Q R Q EELA+TLA QV ++ Sbjct: 3 MLKDKLKFKLQKTAIILICIALLAFLMQGASYFSRANQHARITQFEELAKTLAEQVAFSL 62 Query: 61 APLMRTDSPDEKR--IQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK 118 + + S D I A L+ LT SR+LDA +Y E G IA SGE+V V++RLAL+G+ Sbjct: 63 STYLDDSSKDNVNPLIMANLNHLTHNSRVLDASLYLEDGTQIAHSGENVTVKERLALEGQ 122 Query: 119 KAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVV 178 K+GG FN Q+V P+ GK+ P G+LRLTLDTH L TE+ QVDNTTN+LR+MLL++LAIG + Sbjct: 123 KSGGSFNHQLVVPVPGKDKPKGFLRLTLDTHQLITESSQVDNTTNLLRVMLLVALAIGFL 182 Query: 179 LTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE 214 L+ LLQ WQQSP+LLTA+ P P E+ E KE Sbjct: 183 LSHNLLQLTPVHWQQSPYLLTANLP-PRTEKGEDKE 217 >UniRef50_D1P6F8 Protein smp n=2 Tax=Providencia RepID=D1P6F8_9ENTR Length = 252 Score = 190 bits (482), Expect = 3e-47, Method: Composition-based stats. Identities = 84/211 (39%), Positives = 123/211 (58%), Gaps = 7/211 (3%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPL 63 KL FRLH+ VI++ C+AL+ LM G S+ + + R Q ++L + LA QV +++ Sbjct: 1 MKLPFRLHKTVIIVICVALVTLLMHGVSYLGYSQNQNRVEQFKQLTQVLAEQVAFSLSDY 60 Query: 64 MRTDSPD--EKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG 121 M S D +RI A L+ L + ILDA +Y G L+ + GE V++RLA+D A Sbjct: 61 MVPGSKDFNLERINANLNHLARDKYILDASLYTAAGVLVTQVGEPTTVKERLAIDSNVAL 120 Query: 122 GYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTR 181 F Q+V P+ G+ P GYLRLT+DT L + QQ DN+TNI+R +LL+L IG +L Sbjct: 121 QNFQYQLVVPVQGEKEPKGYLRLTIDTELLIADTQQTDNSTNIMRTFILLALCIGFILAN 180 Query: 182 TLLQGKRTRWQQSPFLLTASKPVPEEEESEK 212 TL + K+ + QQ P ++T PEE + Sbjct: 181 TLFRLKKKKGQQQPLIVT-----PEENDESD 206 >UniRef50_B6X9Y1 Putative uncharacterized protein n=2 Tax=Providencia RepID=B6X9Y1_9ENTR Length = 266 Score = 183 bits (463), Expect = 5e-45, Method: Composition-based stats. Identities = 86/200 (43%), Positives = 125/200 (62%), Gaps = 2/200 (1%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M KL FRLH+ VIV+ C+AL+ LM G S+ + + R QL++L + LA QV ++ Sbjct: 14 MISMKLPFRLHKTVIVIVCIALITFLMHGVSYLGYSQSQSRLEQLKQLTQVLAEQVAFSL 73 Query: 61 APLMRTDSPD--EKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK 118 + M S D +RI A L+ L + ILDA +Y G L+ + GES V++RL+L+G Sbjct: 74 SDYMVPGSKDFNLERINANLNHLAKDQYILDASLYTAAGTLVTQVGESTTVKERLSLEGN 133 Query: 119 KAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVV 178 F+ Q+V P+ G P GYLRLT+DT +L T+ QQ DNTTNI+R+ +LLSL IG + Sbjct: 134 TGLQNFHYQLVIPVQGAKEPNGYLRLTIDTESLTTDLQQADNTTNIMRVFILLSLCIGFI 193 Query: 179 LTRTLLQGKRTRWQQSPFLL 198 L TL++ K+ + QQ P ++ Sbjct: 194 LANTLMRLKKKKGQQQPLIV 213 >UniRef50_C6ALY5 Protein AhpA n=4 Tax=Pasteurellaceae RepID=C6ALY5_AGGAN Length = 225 Score = 157 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 1/190 (0%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 + + K+ + IVL C ++ ++ G F Q Q+ ++ L RQ ++ Sbjct: 3 LVKEKMIKFMMFFGIVLLCAGIMAVILFGVKQFKIGSQLSSVNQVANVSHLLTRQQA-SL 61 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA 120 ++ ++ +R+ LD E +LDA +Y G+L+A+S S ++R L LD ++ Sbjct: 62 FSMLLVNNAKTERLVENLDNFVKEEFVLDAALYARNGELLAQSTNSPDMRSLLGLDKQED 121 Query: 121 GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT 180 +QQIVEPI NG G+LR+T D + +++ + L +++ +GV+ Sbjct: 122 TEADSQQIVEPIYSSNGVEGFLRVTFDAKYGQSTKSKINQIFHRLYGEIIIVFLVGVLFA 181 Query: 181 RTLLQGKRTR 190 +L Sbjct: 182 SSLHYFLSHY 191 >UniRef50_B8F5V9 AphA-like protein/membrane protein affecting hemolysin expression n=7 Tax=Pasteurellaceae RepID=B8F5V9_HAEPS Length = 221 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 5/200 (2%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 ++R +L AVI+ CL ++ ++ G + F Q Q+ L+ L RQ Sbjct: 3 ISREQLIKSSIIAVIMAICLMIVWIILTGINHFKVGSQLAGINQVTNLSHLLVRQQAKLF 62 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA 120 + ++ ++ +++ + LD E+ ++DA +Y G+L+A S ++E R+ D + Sbjct: 63 SLMLVKNAKNDE-LVEALDVFAKEAFVIDANLYSPSGNLVAHSSNAIEFNPRVN-DKIQQ 120 Query: 121 GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT 180 QQIVEPI ++ +G+LR+T D+ T +V+ ++L L++ G + Sbjct: 121 EPALTQQIVEPIFAQDDLIGFLRVTFDSQYGQTTQHKVNELFHLLYGELIILFMSGGLFV 180 Query: 181 ---RTLLQGKRTRWQQSPFL 197 LQ T+ S F+ Sbjct: 181 SCFYYFLQLNTTKTVSSNFI 200 >UniRef50_A6VR58 Membrane protein n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VR58_ACTSZ Length = 223 Score = 143 bits (360), Expect = 5e-33, Method: Composition-based stats. Identities = 50/209 (23%), Positives = 100/209 (47%), Gaps = 10/209 (4%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 + + K+ VI+ C A++ ++ G F Q Q+ L+ L RQ T N+ Sbjct: 3 LVKEKILKSALLTVIIALCAAVMALILFGVKQFQTGSQLAGVNQVANLSHLLVRQQT-NL 61 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA 120 ++ ++ + + LD+L ++ +LDA +Y G+L+A+S S+ +R RL L ++ Sbjct: 62 FSMLLQNNANGATLTESLDKLINDDMVLDASLYANNGELLAQSTASLNLRRRLGLGADES 121 Query: 121 GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT 180 QQIVEPI +N +G+LR++ D +V + L L++ +G +L Sbjct: 122 ERV--QQIVEPIYAENSVIGFLRVSFDGRYGQATQSKVSQLFHHLYGELIIVFLVGALLA 179 Query: 181 RTL-------LQGKRTRWQQSPFLLTASK 202 ++ + +R + + ++ ++K Sbjct: 180 SSVHYFLGHYRRIRRRNHEATAEIVKSTK 208 >UniRef50_Q9L8J3 Protein ahpA n=6 Tax=Pasteurellaceae RepID=AHPA_PASMU Length = 226 Score = 140 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 2/191 (1%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 + + K + I++ C+A++ ++ G F Q Q+ L+ L RQ N+ Sbjct: 3 LTKEKFIKLSMISSIIILCIAIVSVILFGVQQFKIGSQLASVNQVSNLSHLLIRQQA-NL 61 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA 120 ++ ++ +++ LD E +LDA +Y +G+L+A + +R L L+ Sbjct: 62 LSMLLVNNASTEQLTESLDAFAKEEFVLDASIYSNRGELLAHTSHFQNLRLTLGLNSPTQ 121 Query: 121 GGYFN-QQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVL 179 N QQIVEPI NG G+LR+T D+ T ++D+ + L L++ GV+L Sbjct: 122 PDEENTQQIVEPIYSLNGIEGFLRVTFDSKYGKTTQSKIDHLFHQLYGELIIIFLAGVLL 181 Query: 180 TRTLLQGKRTR 190 ++ Sbjct: 182 ASSIHYFLSHY 192 >UniRef50_D0I7W5 Putative SerB-cotransposed membrane protein n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I7W5_VIBHO Length = 202 Score = 136 bits (343), Expect = 4e-31, Method: Composition-based stats. Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 6/202 (2%) Query: 2 ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 K RL + ++V+ C + ++ L ++ + + + Q E L+R + RQ Sbjct: 4 INRKRLKRLWQFIVVVACFSTVMMLFMYSNQLNNRNYKMLYDQTESLSRVILRQAAATAH 63 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK-KA 120 + +D D +Q +++ L E ILDA VYD +G +A S ++ + + L+ Sbjct: 64 TALVSD--DVASLQTLVNHLQSEPLILDAAVYDIKGKRVASSLSAMPLEELTGLNTPLSV 121 Query: 121 GGYFNQQIVEPIAGKNGPLGYLRLTLDT-HTLATEAQQVDNTTNILRLMLLLSLAIGVVL 179 QQ+VEPIA G++R+TL+ + + +++ + N++R M+L+++A G +L Sbjct: 122 ASIGRQQLVEPIAENGNISGFIRITLEHGEVIKAASNRLEQSINLVRAMILVAIATGALL 181 Query: 180 TRTLLQGKRTRWQQSPFLLTAS 201 T R +S FLL ++ Sbjct: 182 IFTF--ANRRDLWRSTFLLKSN 201 >UniRef50_B5FAA2 SMP protein n=2 Tax=Vibrio fischeri RepID=B5FAA2_VIBFM Length = 198 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 91/181 (50%), Gaps = 4/181 (2%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 + + +++L +A ++ ++ S ++Q +N QL++L+RT+ RQ L ++ D Sbjct: 7 VIKGLMLLSLMAFSYFILINSTIISDSNQVIQNKQLQDLSRTMTRQAALFAVDSIKED-- 64 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK-KAGGYFNQQI 128 + + + + + L E + DA +YD +G ++ +S ++ L+ G QQ+ Sbjct: 65 NHEALFQLTNNLAKERLVFDATIYDAEGRILGKSDNALTASQITGLNTPLSIDGIGRQQL 124 Query: 129 VEPIAGKNGPLGYLRLTLDTHTLATEA-QQVDNTTNILRLMLLLSLAIGVVLTRTLLQGK 187 +EPI + LG+LR+T + TL A + ++ ML +SL G+++ L + K Sbjct: 125 IEPIIKDDHLLGFLRVTFEKSTLTGFANHHYRKSDRLMFGMLAISLVSGMLIMGLLRKRK 184 Query: 188 R 188 Sbjct: 185 D 185 >UniRef50_B6ENG7 Peripheral membrane protein n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ENG7_ALISL Length = 199 Score = 134 bits (337), Expect = 2e-30, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 94/181 (51%), Gaps = 4/181 (2%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 + +++++L +A ++ ++ S N+Q +N QL++L+RT+ RQ L ++ D Sbjct: 8 IIKSLMLLSLIAFSYFILINSTVISDNNQIIQNKQLQDLSRTMTRQAALFAVDSIKKD-- 65 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK-KAGGYFNQQI 128 D + + + + L E+ + DA +YD +G ++++S ++ ++ G QQ+ Sbjct: 66 DHEALLQLTNNLAKENLVFDATIYDAEGGVLSKSSNALTASQITGINTPLSIDGIGRQQL 125 Query: 129 VEPIAGKNGPLGYLRLTLDTHTLATEA-QQVDNTTNILRLMLLLSLAIGVVLTRTLLQGK 187 +EPI + LG+LR+T + TL A + ++ ML++SL G+ + L + + Sbjct: 126 IEPIVKDDRVLGFLRITFEKSTLTGFANHHYRKSDRLMFGMLIISLVSGMFIMAILKKRE 185 Query: 188 R 188 Sbjct: 186 D 186 >UniRef50_D0LZV9 Smp-like protein n=52 Tax=Vibrionales RepID=D0LZV9_VIBSE Length = 179 Score = 129 bits (324), Expect = 7e-29, Method: Composition-based stats. Identities = 46/180 (25%), Positives = 92/180 (51%), Gaps = 4/180 (2%) Query: 22 LLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQL 81 +L ++ + S+ +++ + QLE L + L Q +L+ + ++ T D++R+ + +QL Sbjct: 1 MLFITIKNSVVISKGNEKIQAQQLETLTKVLISQASLSASEMILT--KDQERLLKLTNQL 58 Query: 82 TDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA-GGYFNQQIVEPIAGKNGPLG 140 + + DA +YD QG +A S +++ VR+ L LD A QQ+VEP+ +G Sbjct: 59 AQDRLVFDATIYDAQGVRLASSEDALSVREVLGLDTPLATASIGRQQLVEPVFADEALIG 118 Query: 141 YLRLTLDTHTLATEA-QQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLT 199 ++R+T +T + + + + +M+L+S G++ L + R + LLT Sbjct: 119 FVRVTFETGRVTAISDHHYRKSDRYMYMMVLMSFVCGMLFIMILRRQPIRRKKAQNLLLT 178 >UniRef50_Q3IDP2 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q3IDP2_PSEHT Length = 206 Score = 120 bits (301), Expect = 3e-26, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 13/199 (6%) Query: 7 KFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRT 66 K RL R ++ CL LL + +S+ S + + A++L + + LN + Sbjct: 15 KKRLVRLLLATACLILLSWVGINSSFQSH---QLLYDSADSTAKSLTKFMALNAKTPLIE 71 Query: 67 DSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGE--SVEVRDRLALDGKKAGGYF 124 ++ ++ A+ + ++ + +L A +YD+QG LIA S S+ V +L+ Sbjct: 72 --KNKPQLNALCNNISKDEFVLSATIYDQQGMLIASSDNWQSLHVSGQLSESTP-GVSKL 128 Query: 125 NQQIVEPIAGKNG-PLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTL 183 +EP+ + P+G++ +T T T + N + L +LL L I + T Sbjct: 129 KTPFIEPVVSDDDRPVGFVSITYLTRAAVTSSH---NHFHDLGRQVLLMLVIACIFTWQF 185 Query: 184 LQGKRTRWQQSPFLLTASK 202 +G + WQ + ++ S+ Sbjct: 186 GRGLKI-WQVNRYIQKTSQ 203 >UniRef50_A6VUV9 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VUV9_MARMS Length = 480 Score = 119 bits (298), Expect = 6e-26, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 15/194 (7%) Query: 2 ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 R KL + + + L V + + + Q E L +LA Q N Sbjct: 14 IRKKLSASVITVATFISLMILTVCIFWYTMTHALGNYLS--QQTEVLGSSLATQAAFNAT 71 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG 121 + + D + +L++L + IL A V++++ +L+A + + + Sbjct: 72 QSILNN--DLLSLNVLLNRLVVDDNILSARVFNKKDELLAEADSG---NSGMKSEQDFRP 126 Query: 122 GYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTR 181 + I ++ +G++ +TLD Q ++N LL+ +AI Sbjct: 127 SDTRRVYSSSIKFRDEIVGHVLITLDKTPAQATLQHLNN--------LLIGVAIFTCTIA 178 Query: 182 TLLQGKRTRWQQSP 195 LL TRW +P Sbjct: 179 LLLVILITRWLFTP 192 >UniRef50_A4C6X0 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C6X0_9GAMM Length = 205 Score = 116 bits (291), Expect = 4e-25, Method: Composition-based stats. Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 17/200 (8%) Query: 8 FRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTD 67 RL R + L CL + V + +S+ S + Q AR+LA Q++L +R D Sbjct: 16 QRLTRLSLALLCLFIFVNIAFNSSFQSHD---ILLKQSHTTARSLALQMSLAARDAIRVD 72 Query: 68 SPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQ- 126 D+ ++ I++ L + + A ++D G+LI +S +++ ++ KA +Q Sbjct: 73 --DKAALERIVNNLVQDPYVQSAAIFDPFGELITKSNNGYLYKEQ--INQPKALPGVSQL 128 Query: 127 --QIVEPIAGK-NGPLGYLRLTLDTHTLATEAQQV-DNTTNILRLMLLLSLAIGVVLTRT 182 ++EPI + LG++RLT + E + LML+LS+ ++ R Sbjct: 129 LTPVIEPIISQSGKRLGFVRLTYLSRAAMHEGHSYFHQLGRQIALMLILSIVGTWLVARG 188 Query: 183 LLQGKRTRWQQSPFLLTASK 202 + RWQ ++ S Sbjct: 189 I-----KRWQVLRYIRKISL 203 >UniRef50_Q5QXU3 Uncharacterized conserved membrane protein, smp family n=1 Tax=Idiomarina loihiensis RepID=Q5QXU3_IDILO Length = 195 Score = 116 bits (289), Expect = 7e-25, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 79/186 (42%), Gaps = 9/186 (4%) Query: 12 RAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDE 71 RA+ + LL+ ++ + S Q+Q Q + + + + Q + + Sbjct: 16 RALRLAAAGGLLLIIINVWNIASVQSQQQLFSQTQSVTQLMMDQAEHEAHYWLE--HQNT 73 Query: 72 KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG-GYFNQQIVE 130 +R+ A+ D + ++ A + + G+L+ SG + + +D + +VE Sbjct: 74 ERLTALTDNIASHPEVMAATIRNRFGELLVHSGVNSSI-----IDWPTSEDTSEPWVLVE 128 Query: 131 PIAGKNGPLGYLRLTLDTHTLATEAQQVDN-TTNILRLMLLLSLAIGVVLTRTLLQGKRT 189 I ++ GYL++ D + L ++Q N +L+LLL++ GV + + + Sbjct: 129 EINLEDNVSGYLQVIFDKNLLLKQSQTAHNGLMQQGKLLLLLAMLAGVFIMLGFNRIRDR 188 Query: 190 RWQQSP 195 WQ P Sbjct: 189 YWQVEP 194 >UniRef50_B0TQ87 Membrane protein n=21 Tax=Shewanella RepID=B0TQ87_SHEHH Length = 493 Score = 112 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 11/184 (5%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 K R+ R + ++ +AL + L Q Q+ Q E++AR L +Q AP + Sbjct: 8 KKSHRISRLLQIMIAIALFIGLDQLWETSLLQGQQLLKSQTEKMARLLVQQTAYGAAPAL 67 Query: 65 RTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYF 124 + +++++Q + L + +++ A ++ E G + S + + L D ++ Sbjct: 68 QL--ENDEQLQWLAQALVLDPKVMSASIFSEDGVRL--SFAQSVIDEDLEPDSEELSSIL 123 Query: 125 NQ--QIVEPIAGKNGPLGYLRLTLDTHTL---ATEAQQVDNTTNILRLMLLLSLAIGVVL 179 +Q VE ++ LGY+ + L+ EA ++ + MLL++ IG++L Sbjct: 124 DQYPPYVEAVSQDGKNLGYVEVRLEPKYFFNEIKEAHHINMEQQQI--MLLIAGLIGMLL 181 Query: 180 TRTL 183 +R L Sbjct: 182 SRAL 185 >UniRef50_Q1YQI9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQI9_9GAMM Length = 399 Score = 109 bits (271), Expect = 8e-23, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 65/193 (33%), Gaps = 15/193 (7%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPL 63 ++ L + + L A L+ + G + S + L+E Q+ V Sbjct: 1 MHRQYSLAKKLPALVLSACLIFGLFGWALLSSYASQLSQETLQEKGDLTINQLVELVRGP 60 Query: 64 MRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGY 123 + D IQ L + ++ ILDA VYD G LIA+S Sbjct: 61 LFNG--DSISIQVALQNVAEDRIILDASVYDIGGQLIAQS------------KKPAPETS 106 Query: 124 FNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQ-VDNTTNILRLMLLLSLAIGVVLTRT 182 IA + G + +++D+ + Q V N + + LLS Sbjct: 107 IPISFSRNIALQETQAGKVLISIDSRAIQQRHSQVVSNWLMLWAVFTLLSSYGCFRFAEQ 166 Query: 183 LLQGKRTRWQQSP 195 L + R + P Sbjct: 167 LSRRLRMLTNRLP 179 >UniRef50_D0M8D2 GGDEF family protein n=4 Tax=Vibrio RepID=D0M8D2_VIBSE Length = 652 Score = 106 bits (264), Expect = 5e-22, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 9/182 (4%) Query: 9 RLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDS 68 L +I + + + + S + +L E R L V+ ++ + T + Sbjct: 2 SLRAKLIWPILVFITAIFVISKGYTSYTAYQSSKHELVEQTRKLINNVSFSIKDALTTKN 61 Query: 69 PDEKRIQAILDQLTDESRILDAGVYDEQGD---LIARSGESVEVRDRLALDGKKAGGYFN 125 + Q L ++ + +YD+ ++ SG S V ++ A GY Sbjct: 62 KQKA--QTTLINFLNQPNVTRVKLYDQDDQPFVVLEGSGVSAPVPNQTERSKLHALGYAL 119 Query: 126 QQ----IVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTR 181 ++EPI +G +R+TL + Q + +L L+L I + Sbjct: 120 SAKFLYVLEPIIHDGRVIGSMRVTLSHRPIIEAQQSLLQDGAVLLLLLFAGGTIFYISIN 179 Query: 182 TL 183 L Sbjct: 180 KL 181 >UniRef50_A3WNV0 Uncharacterized conserved membrane protein, smp family protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WNV0_9GAMM Length = 215 Score = 101 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 74/188 (39%), Gaps = 12/188 (6%) Query: 8 FRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTD 67 RL R + L L+ ++ + N +Q+ Q T + + T+ Sbjct: 32 KRLLRFMAAAALLTLMYSIWN----IATNQAQQQLEQNTREHLNWVLSQTAAGSQVFLTN 87 Query: 68 SPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQ 127 +++ +Q ++ +L ++ +L + D G G++ + +D Sbjct: 88 G-NQEGLQQLIIRLNEQPGVLAVTLRDAAGINQFSVGQTSSI-----IDYPSTLPE-PWV 140 Query: 128 IVEPIAGKNGPLGYLRLTLDT-HTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQG 186 +V PI + GYL++T D L + + T+ + +LLL+L G ++ + Sbjct: 141 LVHPIGDEFDDQGYLQVTFDKNQILDANEKTLLGLTSQGKTLLLLALITGGLIVLGFNRI 200 Query: 187 KRTRWQQS 194 + RW + Sbjct: 201 RDRRWVKK 208 >UniRef50_A1SXG3 Putative uncharacterized protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SXG3_PSYIN Length = 208 Score = 98.3 bits (243), Expect = 2e-19, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 73/185 (39%), Gaps = 6/185 (3%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 K + L R V + L + + R Q E + +L + + Sbjct: 3 KKMYYLLRTVQISSLLIICSIIAYQFISLRNTSDGIRYQQTERFSYSLTNLAASEASRYL 62 Query: 65 RTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDG--KKAGG 122 + +Q ++ +LTD+ + D +YD+ G +I +S +++ + L + K Sbjct: 63 --SQQKNEDLQLLISELTDDPIVRDVTIYDQFGKIIFQSEDALPLPILLNIASSDDKRAQ 120 Query: 123 YFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQV-DNTTNILRLMLLLSLAIGVVLTR 181 QI E + N +GY+R+ L+ + + + + + + L+ +LS +G + Sbjct: 121 GIIPQIAE-LYKDNEKIGYIRIALEQGKILSLINDYQEKSFSTMLLLFVLSFLVGTIAMA 179 Query: 182 TLLQG 186 + Sbjct: 180 LFFRR 184 >UniRef50_A0Y8S5 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y8S5_9GAMM Length = 481 Score = 97.9 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 71/186 (38%), Gaps = 28/186 (15%) Query: 1 MARTKLKFRLHRA-------VIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLA 53 M + +L + + ++ C + + AS S Q + QL +L Sbjct: 68 MLKDQLTTKFLQLSIPQKASLLCAMCCFSVALCVVAASHISDKQLIQISGQLY--GESLT 125 Query: 54 RQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRL 113 RQ+ + + + D+ +Q++L++L + + +YD + +LIA +G Sbjct: 126 RQLARDASKPLVQG--DKLSLQSLLNKLVESPIVTRGSIYDLENNLIADAGN-------- 175 Query: 114 ALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSL 173 Q I I ++ GY +TLD L + + + ++ L+ +LS Sbjct: 176 -------IRRKAQSISASITFQDSIAGYAVMTLDATLLLQQVNRA--SWQLISLVFVLSG 226 Query: 174 AIGVVL 179 + Sbjct: 227 LSFFLC 232 >UniRef50_A3Y5R2 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y5R2_9GAMM Length = 479 Score = 97.2 bits (240), Expect = 4e-19, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 76/181 (41%), Gaps = 8/181 (4%) Query: 6 LKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRN--PQLEELARTLARQVTLNVAPL 63 ++ +L +++ L L+ + W + + + Q E L +LA Q N Sbjct: 14 IEQKLSASIVTLLTFLSLMLITLALFWVTITNTLESYLTQQTEVLGSSLATQAAFNATQS 73 Query: 64 MRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGY 123 + T+ D + +L +L + IL A V+++Q +L+A E+ D + Sbjct: 74 ILTN--DLLSLNVLLTRLVVDENILSARVFNKQDELLA---EASSDNSSYLNDSNISAVE 128 Query: 124 FNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLML-LLSLAIGVVLTRT 182 + + + +G++ +TLD ++++ + + + LSL I ++TR Sbjct: 129 NKRVFSSSVKFRQEVVGHVIITLDKTPTQNILSRLNSLLISVSIFITALSLLIVFLVTRK 188 Query: 183 L 183 L Sbjct: 189 L 189 >UniRef50_Q39QV4 Sensor protein n=9 Tax=Desulfuromonadales RepID=Q39QV4_GEOMG Length = 484 Score = 97.2 bits (240), Expect = 4e-19, Method: Composition-based stats. Identities = 33/196 (16%), Positives = 78/196 (39%), Gaps = 22/196 (11%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPL 63 L RL ++ L +A+L + +Q Q + +++E + + + + +++ L Sbjct: 1 MTLNTRLVMIMLTLLVIAILTLF-----FLNQYSQNEMVQEIQESSTMVTKALQMSIEDL 55 Query: 64 MRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDR----------L 113 PD R+ L + + + ++ +G++I S + + R + Sbjct: 56 TSEYEPDRGRLTEYLKE-AKVKGVKEINIFSNEGEIIDSSNPAKIGKKREIKKLEKGLKV 114 Query: 114 ALDGKKAGGYFN-QQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLS 172 + K G +V P+ + LGY+++ L + T + N + ++ S Sbjct: 115 SPGTKTDAGSSRAYDLVVPVIVGDEQLGYVQINLLLDNIRTIQHE-----NFVNRVVATS 169 Query: 173 LAIGVVLTRTLLQGKR 188 L + ++ T+ KR Sbjct: 170 LVFLLGISLTIFLAKR 185 >UniRef50_Q487B3 Putative uncharacterized protein n=1 Tax=Colwellia psychrerythraea 34H RepID=Q487B3_COLP3 Length = 230 Score = 95.6 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 76/209 (36%), Gaps = 24/209 (11%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 KL ++ + + + L++ LM + + +A+ +Q VA ++ Sbjct: 11 KLSSIYNKILQLASAILLIIVLMSLWQSTGERNSDNLTAHFNYIAKQQLQQAIAGVAVIL 70 Query: 65 RTDSPD----EKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA 120 + +Q LD LT + + A +YD G L+ S + + L A Sbjct: 71 EQSHESKVDQDAFLQRYLDGLTKVNFVKQAHLYDATGLLVVSSASVEKDKQGNELAPPSA 130 Query: 121 GGYFN---------------QQIVEPIAGKN----GPLGYLRLTLDTHTLATEAQQVDNT 161 + VE I + GYLR T++ L + D Sbjct: 131 KSINDLYGISPHQRNVTDTLTPFVEEIRQTDSSSYNLHGYLRFTIEQSYLTDILAKADEE 190 Query: 162 TNIL-RLMLLLSLAIGVVLTRTLLQGKRT 189 L RLMLLL+ +G +LTR L + R Sbjct: 191 QQSLQRLMLLLAGVVGFLLTRGLNRFSRR 219 >UniRef50_Q1N0U5 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N0U5_9GAMM Length = 454 Score = 95.2 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 72/178 (40%), Gaps = 19/178 (10%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 LHRA+ + ++L +L+ G + + + Q + + TL++Q + A + S Sbjct: 11 LHRAIALAVIFSILASLLVGLTVANSAKAHLQ-QQAQNMRYTLSKQASQQAADAIF--SQ 67 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIV 129 D + IL+ L + + A VYD +IA G+ + Sbjct: 68 DLLSLNVILNGLVEYDDVAYAAVYDLNNQVIAAQGQGANSETTQPM-------------- 113 Query: 130 EPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILR-LMLLLSLAIGVVLTRTLLQG 186 I +N +G+L + LD L Q+ +L L++++ L + ++ L + Sbjct: 114 -SIRYQNEVIGFLDVRLDLSALDQRIAQIYGLWAVLSCLLVVICLTLAWLIGTRLGRA 170 >UniRef50_A6B380 FOG ggdef domain n=6 Tax=Vibrio RepID=A6B380_VIBPA Length = 656 Score = 93.7 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 9/186 (4%) Query: 9 RLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDS 68 L +I + + + + S + +L E R L V+ ++ + T + Sbjct: 2 SLRAKLIWPILVFITAIFVASKGYTSYTAYQSSKHELVEQTRKLINNVSYSIKDALTTKN 61 Query: 69 PDEKRIQAILDQLTDESRILDAGVYDEQGDL---IARSGESVEVRDRLALDGKKAGGYFN 125 + Q IL L ++ + +YD +L + SGES V ++ A GY Sbjct: 62 KRKA--QTILADLIEQPNVSRVKLYDRANELFVLLEGSGESAPVPNQNERSKLDALGYAL 119 Query: 126 QQ----IVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTR 181 ++EPI + +G +R+TL + +L L+L I + Sbjct: 120 SAKFLYVLEPIIHEGHVIGSIRVTLSYIPIINAQHSFLKDAGVLLLILAAGGIIFYITID 179 Query: 182 TLLQGK 187 ++ Sbjct: 180 RIILRP 185 >UniRef50_A4SRU0 Putative SerB-cotransposed membrane protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SRU0_AERS4 Length = 205 Score = 91.0 bits (224), Expect = 2e-17, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 6/129 (4%) Query: 31 SWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDA 90 Q + + A+ L ++ ++ D E ++ + L E ILDA Sbjct: 27 IHMQSESQASLHSEARNRAQALVAYAARDMKRWIKEDKNSE--LERLAQDLAAEPEILDA 84 Query: 91 GVYDEQGDLIARSGESVEVRDRLALDGK----KAGGYFNQQIVEPIAGKNGPLGYLRLTL 146 +YD +G +A+S ++V + L + G G Q V+ I + LGYLR+TL Sbjct: 85 TLYDARGIPLAQSDQAVPLDSLLPIGGDNKSLPEQGKGRIQFVQEIVDEEQTLGYLRITL 144 Query: 147 DTHTLATEA 155 + H L E Sbjct: 145 EEHQLLAEK 153 >UniRef50_A6F6B1 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6F6B1_9GAMM Length = 237 Score = 86.4 bits (212), Expect = 6e-16, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 60/147 (40%), Gaps = 10/147 (6%) Query: 16 VLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP------ 69 +L L+L + A N R Q++ L +L T A L+ S Sbjct: 52 LLIALSLSTFFIFIAISLYNNVTASRYQQVDMLVHSLLDYPTKMAANLIVARSSTDRIIR 111 Query: 70 --DEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQ 127 +K++Q ++D++++ + ++ E G L++ S + + + L + + Sbjct: 112 INSKKQLQQLVDEVSENQYVTSLHIFAENGKLLSSSQD--DYVEALMANKHYVAPAGVRV 169 Query: 128 IVEPIAGKNGPLGYLRLTLDTHTLATE 154 ++PI N P+G+L+L + Sbjct: 170 YLKPILADNKPVGFLQLHFGYQQMLKT 196 >UniRef50_D2L920 Hpt sensor hybrid histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L920_9DELT Length = 963 Score = 82.9 bits (203), Expect = 6e-15, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 17/143 (11%) Query: 63 LMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDG----- 117 + S + + + IL +L +++A ++D +G L++ +G R Sbjct: 61 PLLHQSAELEAARDILGRLVRVEGVVEASLFDGRGTLVSSAGLFPPPPLRADPGEALPAG 120 Query: 118 -----KKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLS 172 + G + +VEPI G+ LG+LRL + ++ + L+ ++ Sbjct: 121 RVYAVQGEAGKLSAILVEPIRGQGETLGFLRL----RYAMRDLSALNRH---VWLVFAVA 173 Query: 173 LAIGVVLTRTLLQGKRTRWQQSP 195 +A + TLL R+ P Sbjct: 174 VAGAYLFLATLLNILLHRFVLKP 196 >UniRef50_C1DLN8 HAMP domain protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DLN8_AZOVD Length = 547 Score = 81.0 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 11/114 (9%) Query: 33 FSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGV 92 ++ + Q + L +TL Q + + L+ + D + +L LT + A V Sbjct: 50 VGLQVRQTMHEQADALGQTLTTQTSAAASHLLVAN--DILSLNVLLGNLTKNPLVAHAAV 107 Query: 93 YDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTL 146 Y+ L+A +G + + PI ++ G+LR+ L Sbjct: 108 YNADNHLLAEAGNRPPRMP------PEGDPSLH---ARPITFQDSVTGHLRIVL 152 >UniRef50_Q9EYZ3 SerB-cotransposed membrane protein (Fragment) n=6 Tax=Photobacterium RepID=Q9EYZ3_PHOPR Length = 83 Score = 71.4 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%) Query: 121 GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEA-QQVDNTTNILRLMLLLSLAIGVVL 179 + QQIVEPI + +G++R+TL+ L A Q++ T+I+R +++ +L IG +L Sbjct: 5 ASFGRQQIVEPIFSGDNIIGFMRITLEHGKLLENANNQIEEMTSIVRGLIIAALLIGFLL 64 Query: 180 TRTLLQGKRTRWQQSPFLLTA 200 T + R PF L Sbjct: 65 AYTFGR--RKDIWHFPFSLRT 83 >UniRef50_Q4ZYZ6 Histidine kinase, HAMP region n=20 Tax=Pseudomonas RepID=Q4ZYZ6_PSEU2 Length = 513 Score = 71.0 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 15/151 (9%) Query: 3 RTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAP 62 R + R+ ++L LAL+ A ++ + Q + L + L Q + Sbjct: 24 RVPIALRIASHNVILVALALV----IYAGVMGLQFKQAMHEQADALGQALTTQTATSATE 79 Query: 63 LMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGG 122 L+ ++ D + +L L + A +Y ++A +G+ + G Sbjct: 80 LLVSN--DILSLNVLLGNLVKNPLVAHAAIYSVDNRILAEAGQRPKNGLLGEAQGLYEIK 137 Query: 123 YFNQQIVEPIAGKNGPLGYLRLTLDTHTLAT 153 I ++ G+LR++LD Sbjct: 138 ---------ITFQDVMAGHLRISLDMSQFQQ 159 >UniRef50_Q1I431 Putative uncharacterized protein n=1 Tax=Pseudomonas entomophila L48 RepID=Q1I431_PSEE4 Length = 483 Score = 68.7 bits (166), Expect = 1e-10, Method: Composition-based stats. Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 15/151 (9%) Query: 3 RTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAP 62 R L R+ I L LAL++ F + + Q + + ++L Q + Sbjct: 24 RIPLALRIASHNIFLVALALVIYACVMGLQFK----QAMHEQADAVGQSLTTQTATSATE 79 Query: 63 LMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGG 122 L+ ++ D + +L L + A +Y ++A +G+ + +G Sbjct: 80 LLVSN--DILSLNVLLGNLVKNPLVAHAAIYSVDNRILAEAGQRPKNSLLGEAEGLYQTK 137 Query: 123 YFNQQIVEPIAGKNGPLGYLRLTLDTHTLAT 153 I ++ G LR++LD + Sbjct: 138 ---------ITFQDVTAGQLRISLDMNQFQQ 159 >UniRef50_B9ZKI9 Adenylate/guanylate cyclase with integral membrane sensor n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKI9_9GAMM Length = 482 Score = 66.4 bits (160), Expect = 6e-10, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 63/179 (35%), Gaps = 6/179 (3%) Query: 13 AVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEK 72 ++ + + L+ + + N Q++ A V A LM D Sbjct: 43 KIVAVVAILTLLGIGTLSVVVLNQVTNVLNNQIQAQAELTLAPVARTSAELMLA--EDYL 100 Query: 73 RIQAILDQLTDESRILDAGVYDEQGDLIARSG-ESVEVRDRLALDGKKAGGYFNQQIVEP 131 ++ +L+ L ++ R+ Y +IA +G AG Q Sbjct: 101 TLETLLNSLVEDGRVESVTAYAIDRGVIASAGTPPSPGGGISEGVWPLAGPVEPYQ--RE 158 Query: 132 IAGKNGPLGYLRLTLDTHTLATEA-QQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRT 189 + ++ +GY+ +DT + ++ + LLSL + + +++ L++ Sbjct: 159 VHFQDVQVGYIEAHIDTTPMQELIRNTINAGIATAIGVFLLSLILAIDISKRLVRPLER 217 >UniRef50_C4XQ28 Sensor protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XQ28_DESMR Length = 1069 Score = 61.7 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 54/172 (31%), Gaps = 20/172 (11%) Query: 37 HQRQRNPQLEELARTLARQVTL---NVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVY 93 + R RTL + + + Q ILD++ +++A ++ Sbjct: 32 SIQDRLEAARTRTRTLLGVLAAHRLEALAPLLQTAQAISAAQVILDRMVQVDGVIEASLF 91 Query: 94 DEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQ----------IVEPIAGKNGPLGYLR 143 G L+A +G DG ++EPI G+ G+LR Sbjct: 92 SAAGILLADAGTGAPAPLASQTDGALPETRIFSVTAENDHLLATLIEPIHGEGEIAGFLR 151 Query: 144 LTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSP 195 L ++ T + + L++A V +L + P Sbjct: 152 L----RYALKDSA---LTGGRVWTIFGLAVAGAYVFLALVLNAMLHLFVLRP 196 >UniRef50_Q15R37 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15R37_PSEA6 Length = 237 Score = 59.8 bits (143), Expect = 7e-08, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 6/184 (3%) Query: 12 RAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDE 71 R + ++ + +++ + + N Q ++ Q +L +L + +A + DE Sbjct: 52 RIINLIIVIVMVLLFVNLWFVDNDNAQNWQSKQSTQLGNSLGLISSQIIAQPLIDR--DE 109 Query: 72 KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEP 131 RI +L L ++ + VYD+ G +A+ G + + + V Sbjct: 110 ARIDQVLKILLNDPHVDAVAVYDQYGQQVAQQGVESSIVAQYQSN----EQNTPLVFVRD 165 Query: 132 IAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRW 191 I + GY+RL L+ T+ + + +L + A+ +L + R R Sbjct: 166 IRVEKQIYGYVRLLLNEQTVMALHSEYQSQLRQQTQVLGILAALAALLMTRIFYKVRYRR 225 Query: 192 QQSP 195 P Sbjct: 226 YIHP 229 >UniRef50_Q0VSG5 Specificity unclear n=2 Tax=Alcanivorax RepID=Q0VSG5_ALCBS Length = 453 Score = 59.4 bits (142), Expect = 7e-08, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 64/165 (38%), Gaps = 10/165 (6%) Query: 27 MQGASWFSQNHQRQRN-PQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDES 85 M N+Q R Q + +A+Q+ V + D D ++ L+ LT Sbjct: 1 MTILGTLLLNNQLSRMRDQADSFGTAIAQQLANTVREPLLAD--DTFFLKVQLNNLTRSE 58 Query: 86 RILDAGVYDEQGDLIARSG----ESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGY 141 + A ++ G+L ++G + + +++ + PI + G+ Sbjct: 59 SVRGAALFGRDGNLTDKAGILPLAASPLHEQVKRWDLEDEPITTY--YAPIKISDVVAGH 116 Query: 142 LRLTLDTHTLATEAQQVDNTTNILRL-MLLLSLAIGVVLTRTLLQ 185 ++L + Q V +T L M ++++ + +++R L Q Sbjct: 117 TAISLSDRPIMAARQAVRDTMITATLIMSVIAIVVAFLISRRLAQ 161 >UniRef50_B3E2P6 Sensor protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E2P6_GEOLS Length = 767 Score = 57.9 bits (138), Expect = 2e-07, Method: Composition-based stats. Identities = 29/191 (15%), Positives = 68/191 (35%), Gaps = 14/191 (7%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 L+ R+ + ++ + + + ++ +Q Q L +++ + + + Sbjct: 13 TLQRRMVAGMTLVMAITMSLFVLDMTRRQEAVALQQHVLQARALTQSV------SASSAV 66 Query: 65 RTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYF 124 S D +Q I+ L + A V D +G ++A S L + Sbjct: 67 WVASRDYSGLQEIIAALEHYPNLAHAIVLDSRGQVLAHSDRKRIGLYLTGLPDQPLLQVL 126 Query: 125 NQQI-----VEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVL 179 + I PI P+G++R+ L+ L + ++ + L ++ +G +L Sbjct: 127 QKTIRMVDVASPILLGGKPIGWVRIGLNGKGLEADIAEIHRN---GLIFALAAVMLGALL 183 Query: 180 TRTLLQGKRTR 190 + R Sbjct: 184 AVLTGRYLTRR 194 >UniRef50_B7J3C7 Sensor protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J3C7_ACIF2 Length = 531 Score = 56.3 bits (134), Expect = 7e-07, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 69/190 (36%), Gaps = 12/190 (6%) Query: 9 RLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDS 68 + I+ + + + +R Q+ L+R + + A + +++ Sbjct: 71 SVRSKSIIFVLMLIAGIYGTIVLFLYTAVERNMEKQIHSKVLHLSRGLARDAADPLLSEN 130 Query: 69 PDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQI 128 + + +++Q+ + I A + D+QG +A + + R L + ++ Sbjct: 131 SNT--LIKLVEQVENNPLIRHAIITDQQGLTVASTQSTAIGRQGLVPTNLE-----REEF 183 Query: 129 VEPIAGKNGPLGYLRLTLDTHTLATEAQQ-----VDNTTNILRLMLLLSLAIGVVLTRTL 183 PI + LGY+ L + + + + + + + + L +++ T Sbjct: 184 TAPIRAGSHILGYVSLRANNDVIQSIVDTRMDLAIRRLSFLGMITAFIGLIGASLISNTF 243 Query: 184 LQGKRTRWQQ 193 + R Q+ Sbjct: 244 TRPIRRLSQK 253 >UniRef50_Q478B9 Sensor protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q478B9_DECAR Length = 631 Score = 55.2 bits (131), Expect = 1e-06, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 74/211 (35%), Gaps = 13/211 (6%) Query: 9 RLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDS 68 RL I + + L + + + + RQ +EE+A L + +A Sbjct: 13 RLLIVAIAIEAVMLTLLVANSLRLLTTHMGRQAEQHVEEIAPVLIAAIVAPLAQ------ 66 Query: 69 PDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSG-----ESVEVRDRLALDGKKAGGY 123 D +QA+ D+ T I + + G L+A SG L + Sbjct: 67 RDYATVQAVFDESTKVGGIDYLALANNDGKLVASSGWPEGAALPPADPHLNI-FDADKQK 125 Query: 124 FNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRL-MLLLSLAIGVVLTRT 182 ++ P+ +G L + +D + T Q+ + + L +LLS + ++L Sbjct: 126 PRYDVLVPVVTYGQKMGSLHIGIDLSQIRTAHNQLFSQGIFIALIEMLLSAGLMILLGYF 185 Query: 183 LLQGKRTRWQQSPFLLTASKPVPEEEESEKK 213 L + Q S + + P E + Sbjct: 186 LTRHLAGLTQASEAVAAGNLTPPPVPEGNDE 216 >UniRef50_Q21LU3 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21LU3_SACD2 Length = 379 Score = 54.4 bits (129), Expect = 2e-06, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 68/214 (31%), Gaps = 28/214 (13%) Query: 2 ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 R K L + ALLV LM + + LA Sbjct: 3 IRLKTFPPLSIFSMGAILGALLVTLMLVPRLITSGEANLSH-----YGNALATMAAHQAV 57 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG 121 + D ++Q IL + + L A ++D + +L+ ++G Sbjct: 58 DASF--NHDLVQLQVILRDVMENPNTLLATIHDVENNLLVQAGN------------HHQA 103 Query: 122 GYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTR 181 G PI + GYL +TL + + + + ++ Sbjct: 104 GENGLTYTAPIVLHDSIAGYLTVTL-KKYQDATRSVLMFLSLFIAALTAVA-------AW 155 Query: 182 TLLQGKRTRWQQSPFLLTASKPV-PEEEESEKKE 214 +L + + W SP A++P P++ SE E Sbjct: 156 SLYESRAIEWVSSPPQKHANRPTKPKQSVSENNE 189 >UniRef50_C4KCR0 Diguanylate cyclase n=1 Tax=Thauera sp. MZ1T RepID=C4KCR0_THASP Length = 444 Score = 53.6 bits (127), Expect = 5e-06, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 84/205 (40%), Gaps = 23/205 (11%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M ++ L R ++++ L +V ++ A+ F+ R + L E R + R + Sbjct: 1 MIAALSRYSLRRQMLLVLGLPSVVFVLCIAALFAYQSSRALDQALLERGRAMVRFLAPAA 60 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVE----VRDRLALD 116 ++ + + + + A++ ++ + ++ G YD GD +A GE V R D Sbjct: 61 EYVLVSG--NREALGALMARVQVQPDVVGVGFYDAGGDALATLGEGVSPRLAAPSRAEGD 118 Query: 117 ------GKKAGGYFNQQIVEPIAGKN----------GPLGYLRLTLDTHTLATEAQQVDN 160 A G+ + P + +G++R+ L T L E + V Sbjct: 119 EIRVDLADGAIGFEAPVVAVPATVDDYAEDSSSKTAPVVGHVRVVLGTARLDAEKRGVFL 178 Query: 161 TTNIL-RLMLLLSLAIGVVLTRTLL 184 T ++L +L ++AI V L ++ Sbjct: 179 TVSLLVLGVLATAMAIAVRLAGSVG 203 >UniRef50_A1U1I2 Sensor protein n=2 Tax=Marinobacter RepID=A1U1I2_MARAV Length = 782 Score = 52.9 bits (125), Expect = 7e-06, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 22/223 (9%) Query: 2 ARTKLKFRLHR-AVIVLFCLALLVALMQGAS--WFSQNHQRQRNPQLEELARTLARQVTL 58 R +L +RL R V+V L L++ L+Q + ++ + L E++++ A Q+ Sbjct: 5 IRQRLSYRLTRDTVLVAMVLGLVLNLIQITLDYFTARESMDREVRALIEISQSPASQIAY 64 Query: 59 NVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK 118 N+ D + + +LD L +DA + D G +A + +S V + Sbjct: 65 NI---------DVRLAEELLDGLLQHPATIDARIIDSDGQTMAAASQSSPVSRYRWISDL 115 Query: 119 K--AGGYFNQQIVEPIAGKNGPLGYLRLTLDT-HTLATEAQQVDNTTNILRLM-LLLSLA 174 A FN+++ P + PLG L +T+DT H + NT I L L LS Sbjct: 116 LFGASRVFNEELQVP-QLADLPLGQLVVTIDTYHYGIQFLTRATNTLIIGLLKSLALSGV 174 Query: 175 IGVVLTRTLLQGKRTRWQQSPFLLTAS-----KPVPEEEESEK 212 + + L + + +S P+PE + ++ Sbjct: 175 LLAIFYFVLTRPMMNVINALSQVRASSPEKVRLPIPENHKGDE 217 >UniRef50_C8WZC3 Sensor protein n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8WZC3_DESRD Length = 525 Score = 52.9 bits (125), Expect = 8e-06, Method: Composition-based stats. Identities = 40/224 (17%), Positives = 78/224 (34%), Gaps = 20/224 (8%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 +LKF+ ++ +++ ++V +R Q E +LAR + + Sbjct: 11 QLKFK-NKFLVITLANIIVVLAAFSFVVDDYFKKRISQNQEEN-NLSLARNMARESVDPL 68 Query: 65 RTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGES-------VEVRDRLALDG 117 D ++ ++ + A + D G ++A S +S + + Sbjct: 69 LI--HDYLQLDVLVQSTKEALLCKYAYILDHHGRVVAHSDKSRLGQKYSPPSTEEQYIRD 126 Query: 118 KKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGV 177 +K G Q PI + LGY + +D + QQ + + L++ +SL Sbjct: 127 RKVAGVMYQDYFLPIRVRGELLGYAVVGIDRNKETAVIQQSLHGLRLRLLIVAVSLFAFT 186 Query: 178 VLTRTLLQGKRTR---------WQQSPFLLTASKPVPEEEESEK 212 LT + L + TR Q L P+P + Sbjct: 187 ALTASYLASRLTRRIGDLKQSMRQVQQGDLNVQLPLPRASSCKD 230 >UniRef50_A0Y7P2 Adenylate/guanylate cyclase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y7P2_9GAMM Length = 477 Score = 52.9 bits (125), Expect = 8e-06, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 65/181 (35%), Gaps = 10/181 (5%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 + + +L +++A + ++E+ +R + + + Sbjct: 14 MAIKLSLLIVSIMVIATAIQGLIIASQQGELLEHEIEKFGFATSRLLVRQIKEPLLA--K 71 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQ-- 127 D+ ++ I+ ++ + + +G+ IARSG + A++ A QQ Sbjct: 72 DDLALEQIVQSSVRDNGVAGITITSIEGEKIARSGFNPTFD-VSAIETPVAWADLQQQQY 130 Query: 128 --IVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQ 185 E + +G + +T+ +L + L+ + IGV++T + + Sbjct: 131 ISFFEIAYSNDLKIGEVLVTIHADSLDKVRSDATRSIIY---STLIMIVIGVIITAWISR 187 Query: 186 G 186 Sbjct: 188 R 188 >UniRef50_A4BIA0 Adenylate/guanylate cyclase n=1 Tax=Reinekea blandensis MED297 RepID=A4BIA0_9GAMM Length = 456 Score = 52.9 bits (125), Expect = 8e-06, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 64/184 (34%), Gaps = 13/184 (7%) Query: 12 RAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDE 71 + + L L VA++ G Q L +LA Q L+ TD D Sbjct: 9 KLATTIIALILFVAMLIGYPLV-YRQFSMMEEQFNALGESLADQAASGATELIFTD--DN 65 Query: 72 KRIQAILDQLTDESRILDAGVYDEQGDLIA------RSGESVEVRDRLALDGKKAGGYFN 125 ++ +++ D+S ++ + + GD+ S + L+ G Sbjct: 66 FGLERLINNYEDQSGVVSVIIVNRDGDIFGTLSPRPDSTILISEESFLSAGQLLEEGDIA 125 Query: 126 QQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQ 185 +P+ + G + + L+ L + V +T +L+LS+ +L L + Sbjct: 126 W-FRKPVRFQQVVGGSVWIGLNKSPLLDNQRLVISTAITGVALLVLSV---FLLAIRLSR 181 Query: 186 GKRT 189 Sbjct: 182 NLSK 185 >UniRef50_D2L5Y5 PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L5Y5_9DELT Length = 712 Score = 52.5 bits (124), Expect = 9e-06, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 74/220 (33%), Gaps = 18/220 (8%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 +L FR ++ + L+ + +W + + + + L+ + + V+ M Sbjct: 32 RLSFRTKINCGIVLIVGLVSIPLAYLTW--RAAAQSLQAETRKRGLVLSENLAMRVSDAM 89 Query: 65 RTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIAR----------SGESVEVRDRLA 114 S D R++ ++D+L I+ A + D G ++ + + Sbjct: 90 L--SMDLLRLKNMVDELRKVDDIVYAFILDRDGRVLVHTFRDGFPVELTDANAPAGGAPH 147 Query: 115 LDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLM-LLLSL 173 + G P+ P G R+ L A ++ + ++ +L Sbjct: 148 IQLLDTGRELIDDFAAPVVIVGTPFGTARIGLSRTKAEAAADRLALMIVFYSALAMVAAL 207 Query: 174 AIGVVLTRTLLQGKRTRWQQSPFLLTASKPV---PEEEES 210 A + R + + + ++ + + P E++ Sbjct: 208 APSTLFARRVTERINRLKIHAEEVVKGNLDLRTGPRTEDA 247 >UniRef50_C7LNA9 Sensor protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LNA9_DESBD Length = 677 Score = 52.1 bits (123), Expect = 1e-05, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 21/213 (9%) Query: 2 ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 AR K + +L+ +I + V L + S + + L + Sbjct: 6 ARFKFETKLNLGIIAIVLGMAAVLLPVVSKMTSS----ALVAENKLRGAALVESLAARAV 61 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARS-----------GESVEVR 110 + D ++ ++ ++ D ++ A V + ++ S SV Sbjct: 62 NPLLA--QDYLVLRNLVSEIGD---VVYAFVQNADNRVVTHSFVKGYPVELVGANSVGSD 116 Query: 111 DRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNIL-RLML 169 +R+ + G F PI +G +R+ L L +Q + + +L Sbjct: 117 ERVHVQLIDTGQIFVYDFAAPIMVAGERIGTVRIGLSKSRLNATTKQFVSALATMFGGVL 176 Query: 170 LLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASK 202 L ++A+G V RT+ + + L+T S Sbjct: 177 LAAMALGSVFARTVTRRLAKLRAHAEDLVTGSL 209 >UniRef50_Q31GA6 Diguanylate cyclase/phosphodiesterase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31GA6_THICR Length = 815 Score = 51.7 bits (122), Expect = 2e-05, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 69/194 (35%), Gaps = 10/194 (5%) Query: 2 ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 + L + R ++V + + L ++ Q + A+ LA+ V + A Sbjct: 8 VKHWLLGSVRRQLVVGMVVVVSTLLAIFIWEVTREQQNVMQELKIDQAKGLAQNVATSTA 67 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG 121 + S D +Q I++ L I A V + ++A + S + L + K Sbjct: 68 VWVA--SRDFSGLQNIINGLNKYPDITHAMVLNLNNQVLAHNDLSHRGQYLLDMPAKPEM 125 Query: 122 GYFN-----QQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIG 176 + +V PI +G++R+ L + ++ + LL+++ + Sbjct: 126 TVLHLNKDYIDLVNPIMLSGQHIGWVRIGLSQS---ADLKRFEKIKFSAFAFLLIAVTLA 182 Query: 177 VVLTRTLLQGKRTR 190 + + R Sbjct: 183 ALFATVAARYLTRR 196 >UniRef50_A3UW13 GGDEF domain n=4 Tax=root RepID=A3UW13_VIBSP Length = 657 Score = 50.9 bits (120), Expect = 3e-05, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 9/182 (4%) Query: 9 RLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDS 68 + +I+ + + V + S + L + + LA+ V N+ + Sbjct: 9 SIKNKLILPIVIFIAVTFVTIQSVNYTVTFEREKESLIQRVKVLAQGVAYNLQAAIL--F 66 Query: 69 PDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQI 128 D+ Q IL + I+ +YD L A S + R D I Sbjct: 67 EDKSSAQEILSAFVADKDIVRVKLYDINEQLFASYQVSNTLVPRPNTDELNDIADHQFSI 126 Query: 129 VE-------PIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTR 181 E P+ + + LR+T+ T T + + L L++ V L + Sbjct: 127 SENFIFLLVPVTLDDAVIANLRVTISKETFNTILTNIFKVAAVYLLFLVILGGGLVKLVQ 186 Query: 182 TL 183 L Sbjct: 187 RL 188 >UniRef50_Q4ZMU9 PAS:GGDEF n=4 Tax=Pseudomonas syringae group RepID=Q4ZMU9_PSEU2 Length = 972 Score = 50.6 bits (119), Expect = 3e-05, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 5/179 (2%) Query: 3 RTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAP 62 ++ L L ++ + + +L L G F +N Q ++++ A L V Sbjct: 5 KSLLPKSLTSRILAMLSILILTFLTTGLVLFYKNQLLQHIEEIQDTANMLIEVAAQAVEE 64 Query: 63 LMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLA-LDGKKAG 121 + D + + + L A D G +I S + A ++ + A Sbjct: 65 SVVIGDYDTIK-RTLEKTLARSPF-KSAMFIDLSGGVIRLEAASAPLGRAPAWIESEVAA 122 Query: 122 GYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT 180 F+ + PI G +RL+ + +A E + + LL + + Sbjct: 123 RLFD--VNRPITIGGKDYGVMRLSFNAERIAAELYSLVIQATLFAGFFLLISLMLMGFM 179 >UniRef50_C7RL13 Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RL13_9PROT Length = 821 Score = 50.6 bits (119), Expect = 4e-05, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 64/177 (36%), Gaps = 5/177 (2%) Query: 18 FCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRT--DSPDEKRIQ 75 +A ++ + A+ + L + A + A+Q+ + + D +Q Sbjct: 15 LIVACVLVQLVAAALVLLGSTQLLQRALLDQASSQAKQIVALLDYAIAAPLAQRDYATLQ 74 Query: 76 AILDQLTDESRILDAGVYDEQGDLIARSG--ESVEVRDRLALDGKKAGGYFNQQIVEPIA 133 LD + + I + D +G LIA +G + + R + P++ Sbjct: 75 QSLDLIRSDESITYLVLSDHRGKLIATAGWDAARPLPSRDEKGIDLERPDATMHLALPVS 134 Query: 134 GKNGPLGYLRLTLDTHTL-ATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRT 189 PLG++ L T L A + ++ I L +S+A+ V+ + Sbjct: 135 LAGQPLGHVDFGLSTAGLRQARADFLRHSLGITGAALAISMALLTVIAFAITHRLTR 191 >UniRef50_C6NZY9 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6NZY9_9PROT Length = 566 Score = 50.2 bits (118), Expect = 4e-05, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 66/177 (37%), Gaps = 14/177 (7%) Query: 9 RLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDS 68 + R +I+ F +A L ++ Q + EE A +LAR + ++ + Sbjct: 14 SIRRQLILGFAIASLALMLGFGYLILQQQRGALYQSSEERASSLARALAISGTSWALAN- 72 Query: 69 PDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSG---------ESVEVRDRLALDGKK 119 D +Q ++ + A + G+++A + + +L+ ++ Sbjct: 73 -DLVGLQEVVQGFARTQDLQRAYFLNPHGEVLASTNPDEVGFFVTDKTSRDMLASLNREQ 131 Query: 120 AG---GYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSL 173 A I +P+ + LG++R+ + T+ ++ L +L++ Sbjct: 132 AILVNQPNLIVIAQPVLDEGRFLGWVRVEMTRDTVNENLAELTRMWIEFILFAVLAV 188 >UniRef50_Q087E2 Diguanylate cyclase/phosphodiesterase n=2 Tax=Alteromonadales RepID=Q087E2_SHEFN Length = 681 Score = 50.2 bits (118), Expect = 4e-05, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 77/207 (37%), Gaps = 21/207 (10%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 + +L ++ + ++ L +++ + +R++ L L++ L + N+ + Sbjct: 9 TISKKLQFILMSVALISTLTVTSIFSAFELSSAKREQVESLHSLSQML----SPNITAAL 64 Query: 65 RTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYF 124 D D IQ +++ + S +L V + +G ++A++ D Sbjct: 65 LFDDQD--AIQELINPILLRSDVLSVSVTNVEGAVLAQALSKRPSMTLTDDDLN-----D 117 Query: 125 NQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLL 184 Q++ P+ N G L +++D + ++ L + + L Sbjct: 118 ITQVITPLTLDNQNYGDLHISVDDSIITDRIS--------FYGQFIVLLLLSSLCASFFL 169 Query: 185 QGKRTRWQQSP--FLLTASKPVPEEEE 209 R SP +L S+ + E ++ Sbjct: 170 SLFLRRKFLSPMLYLAKISQKITESQD 196 >UniRef50_B3E836 Sensor protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E836_GEOLS Length = 528 Score = 50.2 bits (118), Expect = 5e-05, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 77/212 (36%), Gaps = 17/212 (8%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 ++ +A+ ++ + QR R E AR LA + +V + + Sbjct: 19 FIAFTLLTLLIAIAFMIIMANNEIQNYRQRSR-----EKARLLATILADSVKLPLFSG-- 71 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQGDLIA-------RSGESVEVRDRLALDGKKAGG 122 D ++ + D L + ++ + D ++ S S + + + + Sbjct: 72 DVATLKTLADTLLETPQVAHVVIADHDQRVLVERFSKYIHSPPSDMTTEGMPVHATASTP 131 Query: 123 YFNQQIVEPIAGKNGPLGYLRLTLDTHTL-ATEAQQVDNTTNILRLMLLLSLAIGVVLTR 181 + + A ++ P G +R+++DT L + + T ++ + L LA + + Sbjct: 132 SVDSALSGGPATQSPPFGSVRVSIDTRDLKLSIRNTLFKTGAVVLVFWLAVLAATYPILK 191 Query: 182 TLLQGKRTRWQQSPFLLTA--SKPVPEEEESE 211 + + Q ++ S +P E + E Sbjct: 192 RITRSFDVLTQGLGTMMEGDFSLKIPVESDDE 223 >UniRef50_A1VE11 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=3 Tax=Desulfovibrio vulgaris RepID=A1VE11_DESVV Length = 997 Score = 49.8 bits (117), Expect = 7e-05, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 78/233 (33%), Gaps = 30/233 (12%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M R++L R L +LV A S QL + AR V ++ Sbjct: 1 MIRSRLFRR--------TLLGMLVLFGFYALAVSAGSDIFTRRQLMRESEATARAVAQSI 52 Query: 61 --APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK 118 + + D IQ+ +DQ + A V GD++A + V D AL Sbjct: 53 AGSSMDSLYGLDPITIQSRIDQYLSVPGVRYALVTASSGDIVAHTFAPVVPEDVRALARS 112 Query: 119 KA----GGYFNQQI-------------VEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNT 161 + QQ V P+ G GY+ + +D +L + V + Sbjct: 113 LSDARKADSTFQQYDVDLPDGSAALHCVMPVY--EGLGGYVHIGMDRSSLDSHVGHVVRS 170 Query: 162 TNILRLMLL-LSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKK 213 IL L+ ++ +++ + + + P P E +S + Sbjct: 171 QQILALVFFCVAAFASWFFLQSISRPLAALTDYARKVAAHEFPAPVEVKSRDE 223 >UniRef50_Q67JE7 Two-component sensor histidine kinase n=1 Tax=Symbiobacterium thermophilum RepID=Q67JE7_SYMTH Length = 477 Score = 49.4 bits (116), Expect = 8e-05, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 82/215 (38%), Gaps = 19/215 (8%) Query: 3 RTKLKFRLHRAVIVLFCLALLVAL-MQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 R +L+ RA ++ LAL +AL + R +L++ A ++AR V L V Sbjct: 9 RPRLRVFGIRAKLISVLLALTIALGLVSILQLQATLPRTLREELDKRALSIARNVALRVT 68 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLA--LDGKK 119 + T +P + + + D + A V D +G L+A + RD L Sbjct: 69 DPLLTANP-LEVREILADVQATNPDVRYAFVLDSRGRLVAHTFAGGFPRDLLTQRPAAPD 127 Query: 120 AGGYFNQQIVEP-IAGK------NGPLGYLRLTLDTHTLATEAQQVDNTTNI-LRLMLLL 171 + E + +G G++R+ L L + + + L L +L Sbjct: 128 RTEDVQWLLSEEGVIHDATALIVDGLAGHVRVGLSEAHLMAMLRDMRRRQMLTLALACVL 187 Query: 172 SLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPE 206 ++ +G + + + P L+ A++ V Sbjct: 188 AVLLGYLGIWKV-------TVRVPQLVRAAQAVGR 215 >UniRef50_C6BXC4 Sensor protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BXC4_DESAD Length = 642 Score = 49.0 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 75/220 (34%), Gaps = 17/220 (7%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 +LKFR + + +A ++ A + + Q + LA + + + Sbjct: 7 RLKFRTKINLGLTLIVAFTSLII--AIFVIRMSSDALIEQSRKRGEVLAGNLAMRAENPL 64 Query: 65 RTDSPDEKRIQAILDQLTD-ESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGY 123 S D + +++++L + I+ A + D Q ++A + + K Sbjct: 65 L--SVDLLNLGSMVNELKRADDEIVYAFIMDNQNRVLANTFNEGFPSQLKDANKGKDNKI 122 Query: 124 F----------NQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQ-VDNTTNILRLMLLLS 172 PI + LG +R+ L + Q + + +LLL+ Sbjct: 123 SVVTVDTGKKRIFDFAAPIFLSDKKLGTVRIGLSRSGIHAVVQNLIFAIFALTGAVLLLA 182 Query: 173 LAIGVVLTRTL-LQGKRTRWQQSPFLLTASKPVPEEEESE 211 + I R L + + + T P +E+S+ Sbjct: 183 VLISTQFARHLTFRLGSLQKHAEDIVATHLGPSLRKEDSK 222 >UniRef50_D0MEG5 Sensor protein n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MEG5_RHOM4 Length = 487 Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 74/198 (37%), Gaps = 9/198 (4%) Query: 3 RTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAP 62 R LK +L V+ + LL+ + A + +R++ +LE L R L +VAP Sbjct: 6 RCSLKAQLLLIVLWTCTVILLLNGVLFAFYDLAQFRREKARELEVLGRLLTE---HSVAP 62 Query: 63 LMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGG 122 L+ D+ +L+ + + A +Y G L A + A Sbjct: 63 LVFQDAQ---AASEVLEGVRSIPAVQIAALYTADGRLFAWYLGGLPATALPARLPTSGSD 119 Query: 123 YFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRT 182 + VEP+ + GYL +L ++ ++ ++LLSL I ++L Sbjct: 120 RETLRHVEPVHWEGQTQGYL---YLQASLLGWQDRMVRYASVGGSVILLSLGISMILVAL 176 Query: 183 LLQGKRTRWQQSPFLLTA 200 L + + + Sbjct: 177 LQRRITRPLDHLRRVARS 194 >UniRef50_C8PXS8 Putative uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PXS8_9GAMM Length = 460 Score = 48.2 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 24/173 (13%), Positives = 59/173 (34%), Gaps = 27/173 (15%) Query: 6 LKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMR 65 L R + IVL L LM + + ++ + Q + + Q+ ++ Sbjct: 4 LAPRQGKFAIVLLISFCLHFLM-----LTFSSEKSQYEQRTQKGEKIVEQLAKEA--MVG 56 Query: 66 TDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFN 125 S D + + ++ + + + D+ + ++G++ Sbjct: 57 ITSQDRISLSVLANRYQVDQEVAKLVISDQNNQPLVQTGQAQN--------------EVG 102 Query: 126 QQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVV 178 Q I +PI N LG+ +T + + ++ +L ++ G + Sbjct: 103 QVIDKPIIQNNQVLGHAIIT------MKAVSKGEIVSSQWLFVLGSAILHGFL 149 >UniRef50_A6EVW8 Sensor protein n=1 Tax=Marinobacter algicola DG893 RepID=A6EVW8_9ALTE Length = 484 Score = 48.2 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 72/198 (36%), Gaps = 20/198 (10%) Query: 18 FCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAI 77 L + + +QN+++Q +L +A LA Q + D +++ +I Sbjct: 22 SALGITLVCASLIFVENQNYRKQLESELHVIAGILAEQSAAALV------FEDNEQLSSI 75 Query: 78 LDQLTDESRILDAGVYDEQGDLIAR-SGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKN 136 + L I A VY++QGD++ SG + + Q++ P+ N Sbjct: 76 ITSLKRIDTIRQACVYNQQGDVMTSLSGRPQGQCPSVGSSLEVGFVGDVYQLLMPVTLDN 135 Query: 137 GPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGV--VLTRTLLQGKRTRWQQS 194 +G L L+ ++ +R + ++ IG ++ L + R Sbjct: 136 EVVGQLFLS----------SHLEVLRGHIRTFVSVASGIGAVILIALVFLALRLQRIVSE 185 Query: 195 PFLLTASKPVPEEEESEK 212 P +L S+ + Sbjct: 186 P-ILKLSETAERIAQDHD 202 >UniRef50_A0L8N5 Sensor protein n=3 Tax=cellular organisms RepID=A0L8N5_MAGSM Length = 780 Score = 48.2 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 65/191 (34%), Gaps = 19/191 (9%) Query: 11 HRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPD 70 I L L+ + + + Q A +L+R + N + D Sbjct: 16 LMLGIALVHAVLMTLFIFDLV---DRQRDFLHKQAVAQATSLSRTLAANSISWVLAR--D 70 Query: 71 EKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVR------DRLALDGKKAGGYF 124 ++ +L + D + A V D G +++ S +S + +D Sbjct: 71 FVGLEELLSSMLDYPELRYAMVVDVNGKVLSHSDKSKAGKFLADPLSLKLIDAPNTLQVL 130 Query: 125 NQQ-----IVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVL 179 Q + PI +G+ R++L + Q++ + T L L ++ +G+V Sbjct: 131 LQSKQVIDVAMPILTNQQLVGWARVSLSQN---KSGQELLHVTYKGFLYTLFAIVVGIVF 187 Query: 180 TRTLLQGKRTR 190 + +G Sbjct: 188 AYFMARGLTKD 198 >UniRef50_UPI0000E0E132 hypothetical protein GHTCC_09125 n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E132 Length = 187 Score = 48.2 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 28/191 (14%), Positives = 65/191 (34%), Gaps = 14/191 (7%) Query: 6 LKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM- 64 + L R + ++ L + + Q +Q H Q L + L++ +++P + Sbjct: 1 MTRYLIRTIFIVTSLFAVAWVWQIQHHTTQAHYAVYTQQ---LGQRLSQIAAGSLSPWLN 57 Query: 65 -----RTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKK 119 S ++++ L+ D V++ G + G E+ + + Sbjct: 58 DTIMKTEQSNYREQLEYTLNTYLDLGHFRGITVFNRYGVEL---GNVGEIDSIVGFIEQH 114 Query: 120 AGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVL 179 + + PI + GY+R +D + + Q+ + +++LL Sbjct: 115 HLPF--SVFISPITVNDDTAGYIRFVVDDDIIVAQQLQLQKQQQGMFIVILLIGMFIGGF 172 Query: 180 TRTLLQGKRTR 190 L K Sbjct: 173 AIRLYYRKARY 183 >UniRef50_A1TTM1 Diguanylate cyclase/phosphodiesterase n=2 Tax=Acidovorax RepID=A1TTM1_ACIAC Length = 1004 Score = 48.2 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 64/187 (34%), Gaps = 9/187 (4%) Query: 7 KFRLHRAVIVLFCL--ALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 LHR ++ L+ + S N + A A Q T+ V Sbjct: 3 SKSLHRRFQWAVVSVAGVMAPLVAIVLYLSAKSHYLENSEASARAIAAAVQQTMAVGVY- 61 Query: 65 RTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYF 124 + DE ++ +LD L + G+ D G +A + A F Sbjct: 62 ---ARDEVLLKELLDGLAHHPSVARVGIRDAAGITMAAKANPDAGPGATDGNAP-AKPTF 117 Query: 125 NQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQ-QVDNTTNILRLMLLLSLAIGVVLTRTL 183 ++ P + G +G L++ L+ L EA Q + ++L L + +L R + Sbjct: 118 QSPLMSP-FRREGQIGDLQVWLNYQRLNAEAGWQAAQLVAAITVLLAGVLGVFSMLARRM 176 Query: 184 LQGKRTR 190 L R Sbjct: 177 LSQPMHR 183 >UniRef50_B8FK56 Sensor protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FK56_DESAA Length = 656 Score = 47.9 bits (112), Expect = 2e-04, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 79/197 (40%), Gaps = 18/197 (9%) Query: 2 ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 ++ ++ +++ A+++ +A L+ + Q +++ + RTL + +A Sbjct: 6 LKSTIRRKVNGAILLTSLIAALIFVAVQIP-MQQRRLNSTMGKVDTILRTLVERDREPLA 64 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALD---GK 118 + S +I+ ++++D ILD VYD+ G L+A S + + + G Sbjct: 65 NEIFERSVRAIKIR--TNEMSDIPGILDISVYDKHGRLLA-SDDLPLLSQLIPPARIVGP 121 Query: 119 KAGGYFNQ---------QIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLML 169 Q Q I +GY+ + D + E + + + + +ML Sbjct: 122 AHATDIRQMTFGGLKALQFTRTIDAVGEHIGYITIIYDLSEVLKE-HKYYSLLS-IAMML 179 Query: 170 LLSLAIGVVLTRTLLQG 186 + +G+ L L +G Sbjct: 180 SVLGCVGLFLNLLLSKG 196 >UniRef50_Q2LRV4 HD domain / HAMP domain protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRV4_SYNAS Length = 484 Score = 47.9 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 22/199 (11%), Positives = 62/199 (31%), Gaps = 21/199 (10%) Query: 6 LKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMR 65 L+F++ V++L + + + + + + E +++++A N Sbjct: 40 LRFKIALFVVLLLTATSFILCITTVTIMNNYILNEITKRGESISKSIAASAGYNFL---- 95 Query: 66 TDSPDEKRIQAIL-DQLTDESRILDAGVYDEQGDLIARSGESV--------------EVR 110 S D + ++ + + + A + G ++ S ++ Sbjct: 96 --SKDILGMDNLVFKAQSSNNDVEYAAIVAPDGKVVVHSDLAMRGQTLRDDEGRWIRSGE 153 Query: 111 DRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLL 170 + + +I PI N LG + + ++ QV + ++L Sbjct: 154 EGTTVRDLTNSAGSIFEISCPIIFMNKVLGTVLIGINKSVFQEAQAQVYRRIVTVFGIVL 213 Query: 171 LSLAIGVVLTRTLLQGKRT 189 + + + L Sbjct: 214 VFGVVASTFLVSFLIKPIR 232 >UniRef50_B3PCQ1 Putative uncharacterized protein n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCQ1_CELJU Length = 383 Score = 47.5 bits (111), Expect = 3e-04, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 43/127 (33%), Gaps = 20/127 (15%) Query: 68 SPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQ 127 D +QAIL +L + + A +++ + L+ +SG + Sbjct: 64 QQDLVSMQAILTELQQHTWVQGASIHNVENQLLVQSG----------FKPNQVTQGRRYH 113 Query: 128 IVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGK 187 PIA N GY+ + LD + + L +L + ++ ++ + Sbjct: 114 FSAPIALHNNIYGYVEVVLD------VPRHSERDYQFFLLWILAVFSCLFIIGWSIYR-- 165 Query: 188 RTRWQQS 194 W Sbjct: 166 --HWWVQ 170 >UniRef50_A6LPJ4 Sensor protein n=3 Tax=Clostridium RepID=A6LPJ4_CLOB8 Length = 473 Score = 47.1 bits (110), Expect = 4e-04, Method: Composition-based stats. Identities = 27/207 (13%), Positives = 66/207 (31%), Gaps = 31/207 (14%) Query: 6 LKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMR 65 L +L IV+ + L+ + WF + ++ Q ++ ++ ++ Sbjct: 7 LLQKLIITFIVILTIVLVSLAWLLSIWFRITYFTEKKVQFQKDGE--------YISESIK 58 Query: 66 TDSPDEKRIQ-AILDQLTDESRI---LDAGVYDEQGDLIARSGESVEVRDRLALD----- 116 T + ++ ++ L + D S + D V D+ ++ S S + Sbjct: 59 TYNSNKNSLEYDKLQAIVDMSSVGANADITVSDKFDNIYIYSKTSSTKEIDNKPENLDNS 118 Query: 117 -------GKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLML 169 + PI + GY+ +T + + + L++ Sbjct: 119 KYSLLDGKPVEYIGDRYTYIYPILEDDEFQGYIVMT-------APLSTIGKQLHRIYLIV 171 Query: 170 LLSLAIGVVLTRTLLQGKRTRWQQSPF 196 +S +V +L + +P Sbjct: 172 WISALGAMVFASVVLSLVSKKILINPL 198 >UniRef50_A4J6D4 Putative methyl-accepting chemotaxis sensory transducer n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J6D4_DESRM Length = 360 Score = 47.1 bits (110), Expect = 4e-04, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 59/162 (36%), Gaps = 18/162 (11%) Query: 8 FRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTD 67 F L + + L +++ ++ ++ + + AR + A +R Sbjct: 16 FSLGFKLSLSITLLVMLLMICIGINSYLRNRTILLQEAQSRGWMTARTTSAFAADYLRGY 75 Query: 68 SPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFN-- 125 +P+ + I+D L + I + D G ++ S ES+ + + ++A Sbjct: 76 NPNLQS--NIIDHLERDPFIKRVAILDINGVVLKSSDESMVQKKMTGQEVQEALIQKKDT 133 Query: 126 -------------QQIVEPIAGKNG-PLGYLRLTLDTHTLAT 153 + + P+A +N PLGY + D ++ Sbjct: 134 LKYISDIKGHPLTMEFISPVAARNEAPLGYFWIEADLTYISA 175 >UniRef50_UPI0001C421AE two-component sensor histidine kinase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C421AE Length = 468 Score = 46.7 bits (109), Expect = 5e-04, Method: Composition-based stats. Identities = 24/188 (12%), Positives = 70/188 (37%), Gaps = 15/188 (7%) Query: 9 RLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLAR--QVTLNVAPLMRT 66 ++ +++L C+ ++V + + + Q +E T R + + R Sbjct: 2 KIRNWLLLLLCIVMVVPFVSTYFFIGYINDWIEREQFQEYIDTSIRIHHLASTLKENPRL 61 Query: 67 DSPDEKRIQAILDQLTDESRILDAGVYDEQGD-LIARSGE-----SVEVRDRLALDGKKA 120 +A+ ++ ++ + +Y + L+ +G+ +V + + Sbjct: 62 YQFPPVDEEALAGEIKEDEIV---HIYSKDRQALLNINGQTLYTGAVPANQLMQGLYETE 118 Query: 121 GGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLT 180 + EP+ ++ +GY + + L + + +I ++ ++S+ I +L Sbjct: 119 ESLSHFTYKEPVYYEDEIIGYFEIKKERTELMKQIDR----GSIYTVLFMISVLILTLLI 174 Query: 181 RTLLQGKR 188 L +R Sbjct: 175 THFLVRRR 182 >UniRef50_Q1D8X3 Methyl accepting chemotaxis protein n=3 Tax=Myxococcaceae RepID=Q1D8X3_MYXXD Length = 538 Score = 46.7 bits (109), Expect = 6e-04, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 76/200 (38%), Gaps = 16/200 (8%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPL 63 T+L R+ + L+ ++ +W L A +++ ++ +AP+ Sbjct: 21 TRLSLRMKILALTGATGGLVAVILITTTWMQMG--DALRNDLSRRANSVSVELAKTLAPM 78 Query: 64 MRTDSPDEKRIQAILDQ-LTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGG 122 + D +R+Q ++ L+ + V+D G L+ + V + A + Sbjct: 79 LSV-KRDPERLQELVQGALSLGPEVAYVRVHDADGVLLGEAAAERYVGEAQAPASVEGDA 137 Query: 123 YFNQQ-------IVE---PIAGKNG--PLGYLRLTLDTHTLATEAQQVDNTTNILRLMLL 170 ++ +VE P+ LG L+L L L+ ++ T I+ L++L Sbjct: 138 SVLRRRSVKGTGLVETTTPVLAAGSTAQLGTLQLALHEEGLSQTLREATRFTAIISLLVL 197 Query: 171 LSLAIGVVLTRTLLQGKRTR 190 ++ + L +L R Sbjct: 198 VACMVAAWLVSGMLVVPLER 217 >UniRef50_B8GMD2 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GMD2_THISH Length = 487 Score = 46.3 bits (108), Expect = 7e-04, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 68/182 (37%), Gaps = 10/182 (5%) Query: 11 HRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPD 70 + + + LA+LV + GA +Q+ Q R Q E TLARQ+ L+ D Sbjct: 26 WKLALTIAALAVLVMGILGAILLAQHTQTLR-AQAEGFGETLARQLAGTSVELVLA--ED 82 Query: 71 EKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK------KAGGYF 124 + + A+++ L I A + D G IA++G G+ G Sbjct: 83 QLALAALVNNLAQSDGISGATILDANGAAIAQAGAQPAQGQVSEPWGQGRRWLLAESGEP 142 Query: 125 NQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNT-TNILRLMLLLSLAIGVVLTRTL 183 P+ + LG +T L ++ T +M LL+ +L + L Sbjct: 143 VASHRAPLRFQELELGQAVVTHSLAPLEATTRRAVALVTGATLIMALLASLAAGILGKRL 202 Query: 184 LQ 185 + Sbjct: 203 SR 204 >UniRef50_B4RY75 Sensor protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RY75_ALTMD Length = 557 Score = 45.9 bits (107), Expect = 9e-04, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 2/127 (1%) Query: 68 SPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEV-RDRLALDGKKAGGYFNQ 126 S D + A + ++ I V D+ G++ G + R +A D Sbjct: 61 SYDLASLDADVSEILTNPNISYVKVKDKLGNVFVGKGNQQALNRPFVADDSVSEADDGIY 120 Query: 127 QIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLM-LLLSLAIGVVLTRTLLQ 185 PI N GY+ + L+ ++ +V N T L LM +L +L L+ Sbjct: 121 DTRAPIMVNNSLYGYVEIGLNIASVTESVSRVKNWTLTLALMEFILVGLCSYILGSYLMS 180 Query: 186 GKRTRWQ 192 R Q Sbjct: 181 QLRQLHQ 187 >UniRef50_A1HU07 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU07_9FIRM Length = 478 Score = 45.6 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 78/203 (38%), Gaps = 21/203 (10%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQN--HQRQRNPQLEELARTLARQVTLNVA 61 ++ R V ++ L +++ L+ S Q E+ ++A + L A Sbjct: 1 MRIIKRTGFFVKMMLALTVVLILLGATSIVQTRFMMNDLFKEQQEKRGISIANTLALRAA 60 Query: 62 PLMRTDSP-DEKRIQAILDQLTDESRILDAGVYDEQGDLIARS-----------GESVEV 109 L+ ++ D + + D+ + V + QG+L+A S ++ Sbjct: 61 NLILVNNYYDLHELVKDTQRTNDD--VRYVFVVNNQGELLAHSFPAGFPKGLLQANTLAS 118 Query: 110 RDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLML 169 ++ + + I PI G LG + + L+ +L ++ TT + L + Sbjct: 119 NEQYKIVELATEEGLVRDIAVPIL--EGRLGIVHVGLNDASLQ---NVLNRTTRQIMLDM 173 Query: 170 LLSLAIGVVLTRTLLQGKRTRWQ 192 ++++ IG++ T L + Q Sbjct: 174 VIAVLIGIMATMFLTRRLVKPIQ 196 >UniRef50_Q2BR48 Gamma-glutamyl phosphate reductase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BR48_9GAMM Length = 531 Score = 45.6 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 64/175 (36%), Gaps = 20/175 (11%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 R + V L LL + + S RQ + + L++Q L + PL+ S Sbjct: 12 FRRNLTVSVGLVLLAGFLLSVFYTSVASSRQAKAETLITGQQLSKQSELLIRPLLL--SS 69 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIV 129 D + +L++L + ++ V D +G ++AR+G S E+ + L Sbjct: 70 DRVSLNYLLNELNELEQVAGIEVVDAKGFVVARAGISSELTIKTRL-------------- 115 Query: 130 EPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLML-LLSLAIGVVLTRTL 183 + +G L LD+ + I+ L L++L R Sbjct: 116 ---LQQEKTIGSTTLWLDSSVSKQTLLRQLWPIGIISLFTALIALLTLWFSCRQF 167 >UniRef50_A4BE47 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BE47_9GAMM Length = 438 Score = 45.6 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 58/183 (31%), Gaps = 16/183 (8%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 + + + + L + ++ N ++L +LAR + + Sbjct: 7 ILQPLTAIALGMLFTLNLLLYFFWYLPGYDNLNAATDQLGTSLARSLAFEATTGL--YDA 64 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIV 129 D I +L++ D+ LI R L K + + Sbjct: 65 DRAAISNLLNRYA-----------DQTDVLITRVLSEEAGGMALTSRTKNSPQNQGRLYQ 113 Query: 130 EPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRT 189 PI N LGY + L L Q + IL M+ L+ + RT Q + Sbjct: 114 HPIHFSNALLGYAEVELRESRLGQWRSQALASW-ILFDMIGLAALAAFIYLRT--QHHQK 170 Query: 190 RWQ 192 RWQ Sbjct: 171 RWQ 173 >UniRef50_A0LD45 Sensor protein n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LD45_MAGSM Length = 874 Score = 45.6 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 67/187 (35%), Gaps = 10/187 (5%) Query: 6 LKFRLHRAVIVLFCLALLVALMQGASW--FSQNHQRQRNPQLEELARTLARQVTLNVAPL 63 + FRL + + A ++ + ++ Q+HQ + L + T AP+ Sbjct: 2 MSFRLKTVLGIALIQAFVLLTLVSSALDDLRQSHQNNLLAHAKTLTTLM---DTATKAPI 58 Query: 64 MRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGY 123 + + +QAI ++ ++ I +YD Q ++ + G + + ++ + Sbjct: 59 LEKNHS---ALQAIAHEIVQKNAITYLSIYDNQQQILYQFGPAPTPHIKPDIN-LRDIDD 114 Query: 124 FNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLL-LSLAIGVVLTRT 182 + P+ + L L L + N L L+ + S+ + +L Sbjct: 115 ATFDLRHPMLHEQSVYATLALGLPVTPIIKALHAAQNQQLRLALLAMSASILVSWLLGSY 174 Query: 183 LLQGKRT 189 L + Sbjct: 175 LTRQLVH 181 >UniRef50_A2P3N3 Signal transduction histidine kinase regulating citrate/malate metabolism n=8 Tax=Vibrio RepID=A2P3N3_VIBCH Length = 520 Score = 45.6 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 75/217 (34%), Gaps = 18/217 (8%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M + + + +L C A + + + QR + Q+ A+ A Q+ Sbjct: 1 MPSRMIPRTFTQQLTLLLCSAFAAGALVWWWFSADKIQRLMSHQIALRAQVQAVQLAQYP 60 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA 120 + + D K++ ++ L + V D QG +A + + D + A Sbjct: 61 DLIEAVNKRDAKQVSQLVQALQSVTDADFITVSDRQGIRLAHPITARIGLPVMGDDIRPA 120 Query: 121 GGYFNQ-------------QIVEPIAGKN-GPLGYLRLTLDTHTLATEAQQVDNTTNILR 166 + + PI N +G +++ L T A + L Sbjct: 121 LDEGKAYLSYSVGSMGPSLRYISPIRAANGDVIGMIKVGY---LLDTVAVWQNEKLQPLL 177 Query: 167 LMLLLSLAIGVVLTRTLLQGKRTRWQ-QSPFLLTASK 202 L+ ++L + +++ + R + Q + P+ L S Sbjct: 178 LVAGITLLLATLISTAFARLVRRQMQDREPWQLAQSL 214 >UniRef50_Q02A70 Sensor protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02A70_SOLUE Length = 630 Score = 45.2 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 4/177 (2%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPL 63 K L R + L +V + A+ FS ++ Q +A V V P Sbjct: 1 MKGYASLRRKLATLIAGGGVVTALIAAAGFSWLDLQRFQQQANAQVTAIANIVAGQVEPS 60 Query: 64 MRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGY 123 + IL L + I DA +YD +G+ A + + DG K Sbjct: 61 IALGDRRVAA--EILQSLRGDRMIRDAILYDGEGECFAVARALLAACPPRPRDGLKRERE 118 Query: 124 FNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNI-LRLMLLLSLAIGVVL 179 +V P+ +G L L ++ Q + + L LL++ + +VL Sbjct: 119 -AIVLVRPVLSGGERVGTLVLAASVPSIREVLGQYLGGAALIMALTLLVAGVLAMVL 174 >UniRef50_D0KWM5 Serine/threonine protein kinase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KWM5_HALNC Length = 557 Score = 45.2 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 64/180 (35%), Gaps = 20/180 (11%) Query: 15 IVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVT-LNVAPLMRTDSPDEKR 73 +L L + VA++ G W + +L+ V L+ D+ Sbjct: 297 PLLMALVVAVAMVLGMIWVYHKQNNVITELAYDYGFSLSEWVAVQTAEDLLL---QDKLA 353 Query: 74 IQAILDQLTDESRILDAGVYDEQGDLIARS-GESVEVRDRLALDGKK------------- 119 +Q+ +D ++ I+ + ++G + A++ G+ + R L Sbjct: 354 LQSWVDSMSHNREIVYMAIRGDKGQIEAQTRGDQLVARMAAQLKEDHVVLSRGDLRVYAV 413 Query: 120 --AGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGV 177 G PI +N +G LR+ L T LAT + T ++LL + G Sbjct: 414 QQDAGAPFYVFETPITYQNHTIGQLRIGLTTDALATANRTTLLTLLTWFAIVLLVVVAGT 473 >UniRef50_Q2BN03 Sensory box sensor/GGDEF/EAL domain protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN03_9GAMM Length = 923 Score = 45.2 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 71/193 (36%), Gaps = 14/193 (7%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPL 63 K + + V ++ + L + + S ++Q + +++ L L + + Sbjct: 12 MKFRTKTILGVALIELVLLGILTLNVISMLRDSNQEEATRKVK-LTEALILAASESA--- 67 Query: 64 MRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGY 123 S D +Q++ D + + +D +++A S + ++ A D + Sbjct: 68 --IFSYDVATLQSLADSIIQTEELAYVRFWDNDYNILAES---WLLSEQDASDFYLSSET 122 Query: 124 FNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTL 183 ++ I PI G+ + +D +A+ + N T L L ++ +AI + L Sbjct: 123 LHKTI--PIEVSGQTSGFAQFGIDQGYIASVLNRAINQTVSLALFEVILVAI---FSAVL 177 Query: 184 LQGKRTRWQQSPF 196 + F Sbjct: 178 GVYLTRQLNSLTF 190 >UniRef50_B8CL71 Sensor protein n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CL71_SHEPW Length = 1192 Score = 45.2 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 69/183 (37%), Gaps = 10/183 (5%) Query: 6 LKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMR 65 + FRL + + +L+ L+ S + ++E+ A++ A + Sbjct: 1 MSFRLKTILGIAIIEGVLLMLLVYTSIDYLKSSNES--EIEKRAQSTASLFAAAAKDAVL 58 Query: 66 TDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLI-ARSGESVEVRDRLALDGKKAGGYF 124 S D + + ++L +++L V++ L+ A + V + R + G Sbjct: 59 --STDLSTLNNLANELISTNQVLYVNVFNRDDLLVTAGANSGVHLAARDSNVTTVDDGIL 116 Query: 125 NQQIVEPIAGKNGPL-GYLRLTLDTHTLATEAQQVDNTTNIL-RLMLLLSLAIGVVLTRT 182 + +E + ++G + G + L ++ L ++ L ++L +L Sbjct: 117 D---IEAMVAESGIVYGRVELGVEISKLDIFIADATKQFLLIAALEMVLVALFSWLLGHY 173 Query: 183 LLQ 185 L + Sbjct: 174 LTR 176 >UniRef50_B8G173 Histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8G173_DESHD Length = 482 Score = 44.8 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 17/194 (8%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 + ++ + L + + + + Q+ QL+E R +A V M Sbjct: 16 IKMKIMGIVILFVSLLGLIVIMETRSHMQQILREQLKERGRAIASDVAARSTNPMLIG-- 73 Query: 70 DEKRIQAILDQL-TDESRILDAGVYDEQGDLIARS-GESVEVRDRLALDGKKAGG----- 122 D + IL L + I ++D+ G+L+ + GE V Sbjct: 74 DSFSLYEILQGLPSHYEDIRYLMIFDKNGELVTHTFGEGVPSGLLNLRSIPADLSHDNTL 133 Query: 123 ------YFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIG 176 ++ PIA +G +G+LRL + ++ + Q+ I +++ L G Sbjct: 134 SFNSNEGEIIDVLVPIA--DGKVGWLRLGMSEISIYSSIDQLSQLLLITTVIISLLGIFG 191 Query: 177 VVLTRTLLQGKRTR 190 +L L+ Sbjct: 192 AILISHLVTKPIRD 205 >UniRef50_UPI0001745085 sensor protein fixL n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745085 Length = 597 Score = 44.8 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 3/118 (2%) Query: 3 RTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAP 62 R L LH ++ + + ++ ++ N +L + A +QV Sbjct: 5 REYLPLPLHISLPLSVLVCCMIFIVVNTLVLLH---LGDNKELRDQALLGGKQVARLARV 61 Query: 63 LMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA 120 R ++ ++ + L+ L SR+ AG+ D++G L+A + + + +G + Sbjct: 62 AGRASLENKDQLNSHLEILASYSRVKWAGICDDRGVLVACTDGDIVGKTVTEAEGPSS 119 >UniRef50_Q1N5D6 Adenylate cyclase n=1 Tax=Bermanella marisrubri RepID=Q1N5D6_9GAMM Length = 465 Score = 44.8 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 11/154 (7%) Query: 32 WFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDE-SRILDA 90 W N N Q + AR L +Q+ + A + D D+ + + D++TD+ ++ Sbjct: 34 WAQSNLNTLLNYQADTYARALGQQIANSSAEPLMAD--DKLALNIMFDRITDQHDSVVRL 91 Query: 91 GVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHT 150 + S E+V D L + +KA ++ +PI + GYL + LD Sbjct: 92 SIKSL-------SEETVITSDSLIAEQRKALQPVLKEYQQPIFFHDVLAGYLLIELDLSI 144 Query: 151 LATEAQQVDNTTNILRLMLL-LSLAIGVVLTRTL 183 + +++ I+ L L +L + + R + Sbjct: 145 VTQSLKRLAKLITIISLTLAFFALILSAIFARRV 178 >UniRef50_A0R7L5 Integral membrane sensor signal transduction histidine kinase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7L5_PELPD Length = 517 Score = 44.8 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 59/187 (31%), Gaps = 18/187 (9%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPL 63 L +L R ++ + V + + N + + AR A + N+ P Sbjct: 9 MPLAGKLQRLLVKSIFICCCVIAISQCLSLAYT----FNKEFDTSARKTADIIARNIEPT 64 Query: 64 MRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGY 123 + + D L L+ + I A VYD G+L A + Sbjct: 65 L--NFGDIDTATKFLQSLSVDDTIEAAAVYDNNGELFALYSNKAGQVPSYNKNIDIGTSI 122 Query: 124 FNQQIVEPIAG-----KNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVV 178 Q+I + I + LG + + L + + L ++ I V Sbjct: 123 IRQEIHKRIISTNTLRQGEKLGTIYIKYKPSVL------YLSLLTSIS-FLAIAFVIAYV 175 Query: 179 LTRTLLQ 185 + L++ Sbjct: 176 AGKYLIR 182 >UniRef50_Q2SJ16 Sensor protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SJ16_HAHCH Length = 488 Score = 44.8 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 27/215 (12%), Positives = 77/215 (35%), Gaps = 8/215 (3%) Query: 2 ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 ++ +K +L + + ++V + + + ++ Q ++ + + LA + + Sbjct: 4 SQMPIKHKLIMMTLFTSVIGIVVVSLSFIWYENLTYKDQLKQEMNVIGKILADRSNAALV 63 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG 121 D ++Q ++ L I + +YD G ++ +++ LA + Sbjct: 64 ------FSDTAQLQDNVNSLKLRQSIELSCIYDAMGAPLSSFSRRQDLQCPLAPAAHEGE 117 Query: 122 GYFNQ-QIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLS-LAIGVVL 179 + + + I +G L + L Q T I+ +++++ L + +L Sbjct: 118 FTSSYFHLTQAIELDGESIGKLYIRSSLQELVGHLQNYIATAAIVSALVVMALLLVSSML 177 Query: 180 TRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE 214 R + + + + E+ + E Sbjct: 178 QRIISTPLVHLTETATRIARVKDYSLRAEQESEDE 212 >UniRef50_A3WNQ9 Sensor protein n=2 Tax=Idiomarina RepID=A3WNQ9_9GAMM Length = 505 Score = 44.8 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 69/188 (36%), Gaps = 23/188 (12%) Query: 6 LKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMR 65 ++ RL V++ L A+ G + +Q +L+ + + R ++L ++ + Sbjct: 23 IQRRLLLYVVIPMLLISGAAITFGLNIAG----QQEEERLKTDLKLIGRAISLPISDALL 78 Query: 66 TDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFN 125 + D +QA LD + + R+ A VYD G +A +G + L + + Sbjct: 79 NN--DLATVQANLDSVFNIGRVYGASVYDVNGQQVAEAGVTETDLSDSWLARQTVQTGVS 136 Query: 126 Q-------------QIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDN----TTNILRLM 168 Q Q + + +G L++ +Q+ + I ++ Sbjct: 137 QDDYRQVEGREVFSQFLPIVDRGGRIIGLLQINRRASDFDERFEQLSQVAWISWFIFAVV 196 Query: 169 LLLSLAIG 176 + L G Sbjct: 197 TIAVLVFG 204 >UniRef50_A3VNZ2 Sensor protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VNZ2_9PROT Length = 796 Score = 44.8 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 8/140 (5%) Query: 52 LARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVE--V 109 LAR NV+ + D D I L L+ ++ A V+ +G+ + E + + Sbjct: 55 LARVTAANVSAAVLFD--DRATINENLSALSQLPDLMAAKVWSVRGEPLGGYIEQTDTAI 112 Query: 110 RDRLALDGKKAGGYFNQQIVE-PIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLM 168 + + + Q V+ PI+ +GY++L +L V I+ + Sbjct: 113 KPLTRGTTPVSIVSWEQVTVQVPISVDQEIIGYVQLV---SSLDRLGFTVKRYLQIVGAV 169 Query: 169 LLLSLAIGVVLTRTLLQGKR 188 L+ +A +L R QG Sbjct: 170 SLVGMAGAFILARLTAQGLI 189 >UniRef50_A5G489 Sensor protein n=3 Tax=Geobacter RepID=A5G489_GEOUR Length = 656 Score = 44.8 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 29/197 (14%), Positives = 59/197 (29%), Gaps = 37/197 (18%) Query: 30 ASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILD 89 ++F Q ++ L LA+ + N + +E+ + +D + +L Sbjct: 35 TAFFFQQQRKALKQGLTNEGVLLAKLLAYNSR--LGVYVENEELLSDAVDGIVRHKEVLF 92 Query: 90 AGVYDEQGDLIARSGESVEVRDRLALDGKKAGG-----YFNQQIV--------------- 129 ++ G + G R + +V Sbjct: 93 VSIHTLTGTPLKEQGRKPSARAGETAASNWQAKADLLKINREPLVVEGVDTFEFLAPVVS 152 Query: 130 --------------EPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSL-A 174 P K +G++RL LD L Q + T+ +L L+ L+S Sbjct: 153 SPAYASEEALLTDESPFKPKERIIGFVRLILDKKFLDQRLQTLLFTSILLALVFLVSGSI 212 Query: 175 IGVVLTRTLLQGKRTRW 191 I ++ + + Q Sbjct: 213 ITYLIVKGITQPLNRLT 229 >UniRef50_C9YA12 Uncharacterized signaling protein PA1727 n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA12_9BURK Length = 786 Score = 44.4 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 61/166 (36%), Gaps = 11/166 (6%) Query: 29 GASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRIL 88 + H + Q E+ A T+A + L+ + + S D +Q I+D I Sbjct: 1 MWELAQRQHSEVKIRQTEQ-ATTMAESIALSSSVWVA--SRDLSGLQEIVDSAAAFPDIR 57 Query: 89 DAGVYDEQGDLIARSGESV------EVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYL 142 V D +G ++A S + ++ + + +V P+ LG++ Sbjct: 58 YVIVLDRRGQVLAHSDAARLGQYMNDLPEEPNTQTLQDASTLL-DLVSPVMLDARHLGWV 116 Query: 143 RLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKR 188 R+ + T+ +++ + + L ++L L +R Sbjct: 117 RIGMGRTQFNTQVERMLQS-GLWYLASSIALIGLFASITGLYFTRR 161 >UniRef50_C7R6K1 Serine/threonine protein kinase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6K1_KANKD Length = 570 Score = 44.4 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 66/205 (32%), Gaps = 30/205 (14%) Query: 12 RAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDE 71 R I L + LLV ++ G W + N + + ++ + ++ + + Sbjct: 297 RWAISLSAVVLLVMIL-GMVWVYNKQNKLMNQLVFDYGNSMVQIISQETREPLLL--EER 353 Query: 72 KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRD-RLALDGKKAGGYFNQQIVE 130 +Q + + S+I + D+ G + + S + L + + QI Sbjct: 354 ITLQELTRDIAGNSQIRHLSIRDKDGIVQSSSQPEQISKPFSLPPASQIQQKTSDAQIYS 413 Query: 131 P--------------IAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIG 176 I ++ +G + + L + Q I +++L++ G Sbjct: 414 NLTDYDQEVVLFDSQIKYQDKVIGNAFIAISRSNLKSATQSSLLAMIIWMFLIMLAVFSG 473 Query: 177 VVLTRTLLQGKRTRWQQSPFLLTAS 201 V W + F+ + Sbjct: 474 V------------YWLANRFIQRVN 486 >UniRef50_Q1JWJ6 Sensor protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JWJ6_DESAC Length = 502 Score = 44.4 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 73/211 (34%), Gaps = 30/211 (14%) Query: 7 KFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRT 66 L R +IV+ L L + + A++ + Q+ + A L + + Sbjct: 3 SSSLIRRIIVMNVLLLTLGIGFFAAFHHKRDQQNMIELTTQGAEILM----ATIENAIFN 58 Query: 67 DS--PDEKRIQAILDQLTDESRILDAGVYD-EQGDLIARSGESVEVRDRLALDGK----- 118 D +R+Q L ++ +L ++D E+G +I S +S + D + Sbjct: 59 SKCKGDAERLQKTLQFISQSPNLLGVRIFDPEEGRIINSSFDSEIDQPVSPQDLEVYTSG 118 Query: 119 ------KAGGYFNQQIVEPIAGKN----------GPLGYLRLTLDTHTLATEAQQVDNTT 162 K IV+PI + G LG L L H Sbjct: 119 RTSGLIKGDQEEVLSIVKPIKARELCKECHGASAGVLGVLNLEYSMHETNARLASSSRCF 178 Query: 163 NILRLMLLLSLAIGVVLTRTLLQGKRTRWQQ 193 ++ + + + L+IG + L++ R Q Sbjct: 179 SMSMVFITVLLSIG--VAVILMRFVRKPIQV 207 >UniRef50_A8H2H2 Sensor protein n=5 Tax=Shewanella RepID=A8H2H2_SHEPA Length = 1186 Score = 44.0 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 72/212 (33%), Gaps = 14/212 (6%) Query: 6 LKFRLHRAVIVLFCLALLVALMQGAS--WFSQNHQRQRNPQLEELARTLARQVTLNVAPL 63 + FR+ + + +L+ L+ S + ++Q ++E+ A + A Sbjct: 1 MSFRIKTILGIAVIEGVLLMLLVYTSVDYLKTSNQA----EIEKRASSTASLFAAAAKDA 56 Query: 64 MRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIA-RSGESVEVRDRLALDGKKAGG 122 + S D + + ++L S++L +YD+ L++ S V + G G Sbjct: 57 VI--STDLSTLNVLANELLTTSQVLYVNIYDQSRLLVSVGSINGGSVASLDSGIGNVDDG 114 Query: 123 YFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRL-MLLLSLAIGVVLTR 181 + I + G + L DT L + + + L +L Sbjct: 115 ILD--IERDVQESGFTYGKVELGFDTAALDSFITDARTRFLTIAGIEMFLVALFSWLLGH 172 Query: 182 TLLQGKRTRWQQSPFLLT--ASKPVPEEEESE 211 L + S +L + +P + E Sbjct: 173 YLTRNLALLKSASQRILQGESKVQIPVSSDDE 204 >UniRef50_Q1IT59 Sensor protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IT59_ACIBL Length = 486 Score = 44.0 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 25/190 (13%), Positives = 65/190 (34%), Gaps = 14/190 (7%) Query: 4 TKLKFRLHRAVIVL-FCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAP 62 + + + + + L+ + + R + L+ T A+ + N Sbjct: 1 MPTNTSIAAKLTWMNIAVTTVALLVASVGFLFYDQSNARTSLVTSLS-TQAQIIAANSVS 59 Query: 63 LMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIA----RSGESVEVRDRLALDGK 118 + + D + + L L + AG+ G L A + V V L+ D + Sbjct: 60 ALEFN--DPESARQTLRALAASPNVEGAGLLTPDGQLFAEYWRSADVRVNVLPSLSPDKQ 117 Query: 119 KAGGYFNQQ--IVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIG 176 + +F+++ ++ I +G + + + + + N + +LL+ Sbjct: 118 QTVLFFSEKVTVIRNIDFGGRRIGAIYI----RSNLSSLNERRNRFLKILFFVLLACMGA 173 Query: 177 VVLTRTLLQG 186 ++ L + Sbjct: 174 ALIVSWLFRR 183 >UniRef50_C8WK19 Sensor protein n=3 Tax=Coriobacteriaceae RepID=C8WK19_EGGLE Length = 518 Score = 44.0 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 75/227 (33%), Gaps = 21/227 (9%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQ--LEELARTLARQVTLNVA 61 L + F A+ + G F Q Q + +LA + A Q+ + Sbjct: 32 DNLTYTTRVTAAFAFIAAMTALVAIGVLSFVWEQHFQTYTQANIYKLAESTAEQIAEIYS 91 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQ-GDLIARS-------GESVEVRDRL 113 T + D I + + + ++D Q G ++ S G + +D Sbjct: 92 D---TGTLDNVGIATVAGYAAKLNGV-GVKIFDNQTGSVVYDSTIPPSENGNDMPGKDYS 147 Query: 114 ALDGKKAGGYFNQQIVEPIAGKNGPLGYLRL-TLDTHTLATEAQQ--VDNTTNIL----R 166 G +Q + PI N +G + + + L ++ + +N+ + Sbjct: 148 RGSLAPPPGDSDQLAIAPIITDNVAVGSVHMWVYGSEALLSQTDEEFRNNSYQAMVFATA 207 Query: 167 LMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKK 213 L ++L+ IG + RTL+ + + E E + Sbjct: 208 LAIVLASCIGFLFARTLVSPINRMTTTAKAIKEGDLSARTELHGEDE 254 >UniRef50_D2YAM3 Signal transduction histidine kinase regulating citrate/malate metabolism n=4 Tax=Vibrio mimicus RepID=D2YAM3_VIBMI Length = 523 Score = 43.6 bits (101), Expect = 0.004, Method: Composition-based stats. Identities = 36/227 (15%), Positives = 78/227 (34%), Gaps = 17/227 (7%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M + + + VL C+A + + + QR Q+ A+ A Q+ Sbjct: 4 MPSRMIPRTFTQQLTVLLCVAFVAGAAVWWWFSADKIQRLMTNQIALRAQVQAAQLATFP 63 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA 120 + + D +++ +++ L + V D G +A S + D + A Sbjct: 64 ELIEAVAARDTEQVSYLVESLQSVTDADFITVSDLAGIRLAHPIASRIGLPVMGDDIRPA 123 Query: 121 GGYFNQ-------------QIVEPIAGKN-GPLGYLRL-TLDTHTLATEAQQVDNTTNIL 165 + + PI N +G +++ L +++++ + Sbjct: 124 LEEGKAYLSYSVGSMGPSLRYISPIRATNGDIIGMIKVGYLLDTVAVWQSEKLQPLLMVG 183 Query: 166 RLMLLLSLAIGVVLTRTLLQGKRTR--WQQSPFLLTASKPVPEEEES 210 + LLL+ I R + + + R WQ + L+T + E Sbjct: 184 GMTLLLATLISTAFARLVRRQMQDREPWQLAQSLMTYEGVIQATHEG 230 >UniRef50_B7KKG7 Sensor protein n=4 Tax=Cyanobacteria RepID=B7KKG7_CYAP7 Length = 436 Score = 43.6 bits (101), Expect = 0.004, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 74/209 (35%), Gaps = 16/209 (7%) Query: 9 RLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDS 68 R R + F L++ L+ A ++ L AR + ++ + Sbjct: 4 RSRRNLARWFTLSMGSILIVFAGIIYYLKAEDSLKAVDSLLYKKARVMAASIEYKFSQGN 63 Query: 69 PDEKRIQA-ILDQLTD--ESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFN 125 P+ + IL + +S ++ A YD QG L+ G S + + + Sbjct: 64 PNFDLTEVPILGNIAQPLDSEVVYARWYDAQGQLVRFFGTSAPEKLSMEPGFHTVTVTLD 123 Query: 126 -----------QQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNI-LRLMLLLSL 173 +Q+ P+ KN +GYL++ L E Q + L + L L Sbjct: 124 TNDLISSKIRVRQVTLPVEEKNVLIGYLQIALPLGNTQAELAQFRLLLTLALPIALGLIG 183 Query: 174 AIGVVLTRTLLQ-GKRTRWQQSPFLLTAS 201 +G +L +Q +T Q F AS Sbjct: 184 LVGWILGSIAMQPILQTYLQLKRFTADAS 212 >UniRef50_A0Y0H9 Sensor histidine kinase n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y0H9_9GAMM Length = 209 Score = 43.6 bits (101), Expect = 0.004, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 69/207 (33%), Gaps = 19/207 (9%) Query: 6 LKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMR 65 ++ L++ + V + SW Q ++ + L LA + + PL++ Sbjct: 1 MRLSLYQKLAVSLAVIFCFICALVYSWSKQLELNSKHHGEQNLHLALAEHLVQD-NPLIK 59 Query: 66 TDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRD----RLALDGKKAG 121 D + ++ + L + DE G ++ S E +V+ L A Sbjct: 60 EGVYDYEALENLFHTLMLLGPAFEFYFVDENGKILTYSAEPGKVKRTHINLTPLKHLIAN 119 Query: 122 GYFNQQI--------------VEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRL 167 V P+ N GYL + + T + + ++L Sbjct: 120 PSATPVYGDNPRNPDQQKIFSVAPVFNNNTLQGYLYVIIGGEAYDTSLNHIKSNDSLLLA 179 Query: 168 MLLLSLAIGVVLTRTLLQGKRTRWQQS 194 + L A+ ++ LL+ +T + Sbjct: 180 AIWLGSALVFIMRCYLLRFLQTLFNAL 206 >UniRef50_Q5R050 Sensor protein n=2 Tax=Idiomarina RepID=Q5R050_IDILO Length = 539 Score = 43.2 bits (100), Expect = 0.006, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 15/187 (8%) Query: 9 RLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDS 68 L R +I + L AL+ G + + Q L + A + +R V N A + + Sbjct: 5 SLKRILIYIVLLVTSFALLVGFTVNIVSQVAQYQESLHDQALSYSRIVAGNAASSLVFN- 63 Query: 69 PDEKRIQAILDQLTDESRILDAGVYDEQ---GDLIARSGES----VEVRDRLA-LDGKKA 120 D + L L + S I VY +L S + + R A LD Sbjct: 64 -DNANEKQRLSSLENTSFIQHVHVYKMDETSNELTFFSSYNKKGLPPIPARFAKLDKLTT 122 Query: 121 GGYFN--QQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVV 178 + ++ +P+ + +GY+ +L + + I ++ +L+L + + Sbjct: 123 PQTNDNYIEVSQPVVLDDEVIGYV---YLRGSLEQARLFMWRSIGIASVVFVLTLLLCWL 179 Query: 179 LTRTLLQ 185 +T L + Sbjct: 180 ITLRLRK 186 >UniRef50_Q5ZU95 Sensor protein n=6 Tax=Legionella RepID=Q5ZU95_LEGPH Length = 910 Score = 43.2 bits (100), Expect = 0.006, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 64/202 (31%), Gaps = 36/202 (17%) Query: 11 HRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPD 70 +I F +ALL A + + L RQ+ M + D Sbjct: 13 ITTLIPAFLVALLFAFFYNGLFGKD-----LKQHMSRLGEAYIRQLLPAAQYAMLRN--D 65 Query: 71 EKRIQAILDQLTDESRILDAGVYDEQGDLIA-----RSGESVEVRDRLALDGKKAGGYFN 125 + +Q +++ T + Y+ G LIA S D ++ Sbjct: 66 YRTLQGLINASTINPEVKALAFYNADGRLIAYRGGKHSIHKPFNPPDYTGDYIESKQINP 125 Query: 126 --QQIVEP---------------------IAGKNGPLGYLRLTLDTHTLATEAQQVDNTT 162 + P I + LG+L + +DT +L + Q+ T Sbjct: 126 FTINFIAPITIPKFNLYSSTEFKELSTPKIFQADDILGWLSIDIDTQSLLIKRYQMLIVT 185 Query: 163 NILRLM-LLLSLAIGVVLTRTL 183 + L LL+ L I L++ + Sbjct: 186 IFITLFGLLMGLTIHYFLSKRI 207 >UniRef50_B7RXE0 Sensor protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RXE0_9GAMM Length = 478 Score = 43.2 bits (100), Expect = 0.006, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 68/187 (36%), Gaps = 8/187 (4%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M + ++ F +R ++ L + + + S ++ R + Q L L+ + Sbjct: 5 MKKIRISF-FYRQLLALVVINSIPLIFVSTELLSSSYSRIKESQEILLKERLSFLSSTVA 63 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSG--ESVEVRDRLALDGK 118 + ++ D Q+IL L + + A VYD +L + + + + + Sbjct: 64 SAILFD---DVNTAQSILSTLEQDKDVRYAKVYDADSNLFSEYSRLNEADSSGFDSSNKE 120 Query: 119 KAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHT--LATEAQQVDNTTNILRLMLLLSLAIG 176 + PI N LG++ L+ DT+ ++ L L+L + Sbjct: 121 IEYAETIIYLRSPITFDNEYLGFVTLSADTYYPGYGKRTDFYLALVAVIIGSLSLALLLN 180 Query: 177 VVLTRTL 183 + R L Sbjct: 181 WFVQRRL 187 >UniRef50_A5G5A8 Metal dependent phosphohydrolase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G5A8_GEOUR Length = 448 Score = 43.2 bits (100), Expect = 0.006, Method: Composition-based stats. Identities = 22/206 (10%), Positives = 53/206 (25%), Gaps = 33/206 (16%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 +LK L ++V + + ++ +L + +L+R + Sbjct: 4 RLKLSLITFLLVTIVILVSSVIVMSIM------DTFLLGELVKRGLSLSRWAANAAGYSI 57 Query: 65 RTDSPDEKRIQAILDQL--------------------TDESRILDAGVYDEQGDLIARSG 104 D + ++ ++ + Y Q ++ S Sbjct: 58 LAR--DRLSVDNLVAKIKERQVDIIHVAVVGRNGMVTAHSELVKSGTRYAPQVGVVLHSD 115 Query: 105 ESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNI 164 + R+ D G + + PI +G+ L +D L Sbjct: 116 ADGSLVSRVNRD-----GRVSYEFSTPIKFAGNEIGHFYLGIDAAALTRAQLDARRKVAS 170 Query: 165 LRLMLLLSLAIGVVLTRTLLQGKRTR 190 ++L +G + Sbjct: 171 ASAVILFLAVVGAFFIARFFTTPIKQ 196 >UniRef50_Q0A9X1 Serine phosphatase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9X1_ALHEH Length = 556 Score = 42.9 bits (99), Expect = 0.007, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 40 QRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDL 99 ++ + V + +PD I L + I ++D GD Sbjct: 45 SMRDEVRTHMQQTLAMVEGSAVDAAFNLNPDGA--NQIARGLAEYEFIQRVELHDNFGDR 102 Query: 100 IARSGESVEVRDRLALDGKKAGGYFNQQ--IVEPIAGKNGPLGYLRLTLDTHTL------ 151 +A + + + I + I G+ P+G LR+ LD + Sbjct: 103 LALYDRPRALNENGMAGRLFDDLSHWEVELIRQDIIGRAEPVGELRVRLDPEVIAAGFVH 162 Query: 152 ATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGK 187 T N L + LL+ ++TR LL+ Sbjct: 163 RTAVNAGVNLIKALAISLLVVAIFHFLITRPLLRLN 198 >UniRef50_Q478G8 Sensor protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q478G8_DECAR Length = 659 Score = 42.9 bits (99), Expect = 0.008, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 56/181 (30%), Gaps = 16/181 (8%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 + + + + ++L + L+ F+ QR +A V N + ++ Sbjct: 8 IRKKIALAIAVSLGIGLLLSFLTFAVREIDQRRQAKTNELFAMADVVAFNASAVIE--FK 65 Query: 70 DEKRIQAILDQLTDESRILDAGVY--DEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQ 127 D K + +L + +L + D I + D Sbjct: 66 DTKGAKQLLSSFAEHPDVLTVRLLGLDSDFRYIFDAVNRQLPAQVNLGDRPHRERAVYAD 125 Query: 128 -----IVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRT 182 + PI ++G +G + +T QV + LL+L I V+ Sbjct: 126 WSNVTVAVPIRSEDGVVGTVSIT-------ASLNQVWQAIAWNLALSLLALTISFVIAFA 178 Query: 183 L 183 + Sbjct: 179 I 179 >UniRef50_B1ZVH0 Sensor protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZVH0_OPITP Length = 754 Score = 42.9 bits (99), Expect = 0.008, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 62/202 (30%), Gaps = 20/202 (9%) Query: 2 ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 + KL + + + L L + + Q + + + + Sbjct: 8 IKRKLAGAIMLTSLTVLALTSLALITY---------ELYAYKQTTRRTLSTIADIIASNS 58 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG 121 + D K IL L DE I A +YD+ G L S+ A G Sbjct: 59 TAVLIYD-DHKLASQILAGLHDEPEIEAAALYDKDGQLYVSYPLSLGPTGVPATPGVDGI 117 Query: 122 GYFNQQIV--EPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVL 179 + +QI EP+ +G L L + + + ++LLS+ L Sbjct: 118 DFGLRQITLFEPVIEGQNRVGTL-------YLRGDLADMYRRLG-VYGLVLLSVLGCSGL 169 Query: 180 TRTLLQGKRTRWQQSPFLLTAS 201 L R P L A+ Sbjct: 170 VALSLAAYFQRLISQPILNLAN 191 >UniRef50_C5BNT3 Putative membrane protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BNT3_TERTT Length = 370 Score = 42.9 bits (99), Expect = 0.008, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 59/166 (35%), Gaps = 21/166 (12%) Query: 49 ARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVE 108 ++LA + D QAIL ++ + + L A ++D + L+ ++G+S Sbjct: 51 GQSLATMAAAQAIEPTFKN--DLISQQAILREVMGQPKTLLATIHDVEHHLVVQAGDSRS 108 Query: 109 VRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLM 168 + L + PI N GYL + L E + + Sbjct: 109 LDAHLN-----------EAYTAPILLHNNIAGYLSVHLAVEKTGAET--------VFVIA 149 Query: 169 LLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE 214 +L S+ + L Q R W P AS P+ + + +E Sbjct: 150 VLGSVLLAAFSLWQLQQQGRLLWPALPRARKASPPLDVDNAPQAQE 195 >UniRef50_A6GTC4 Sensor protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GTC4_9BURK Length = 755 Score = 42.5 bits (98), Expect = 0.010, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 57/174 (32%), Gaps = 20/174 (11%) Query: 23 LVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLT 82 L Q N Q LA + + + L+ D ++ +L + Sbjct: 30 LAFTWFNTKTQRNELQGVFNQQATALAFNI---AVSSNSHLLE---KDFAVVETLLLKAN 83 Query: 83 DESRILDAGVYDEQGDLIARSG---ESVEVRDRLALDGKKAGGYFNQQ----------IV 129 + + A V +G ++A+ ++ + R + Q ++ Sbjct: 84 EFKDLYSATVISAEGKVLAQVLRDPDTQRLSARYDVGRLHVPKRDLQTQLFSNERYLTVI 143 Query: 130 EPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLL-SLAIGVVLTRT 182 EPI +G++ L D L T ++ +L ++L+ + + R Sbjct: 144 EPIESAGRLIGHVVLEFDLTPLQTRQSELIERNVLLAVILIFPAALALWLFIRK 197 >UniRef50_C6WTL1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTL1_METML Length = 976 Score = 42.1 bits (97), Expect = 0.012, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 66/163 (40%), Gaps = 16/163 (9%) Query: 3 RTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAP 62 + ++ + V++ +L + + GA + N ++ + +LE LA+ A ++ Sbjct: 18 KKSIRGEIRHLVLITVLTSLSLTFIFGAIYKINNEKQAVHSELETLAKITALNSQSSLV- 76 Query: 63 LMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIAR--------SGESVEVRDRLA 114 D + Q IL L+ + +LDA V G ++A+ S + + V + Sbjct: 77 -----FNDARAAQEILQSLSARADVLDAQVLRVDGTVLAKKKFEKQTLSNDYLFVPNDAL 131 Query: 115 LDGKKA-GGYFNQQIV-EPIAGKNGPLGYLRLTLDTHTLATEA 155 L G V E + KN PLG + + DT + E Sbjct: 132 LSQLGNFLGISPSTYVTEHVTLKNTPLGNISIRFDTSIVLHEI 174 >UniRef50_B9LZJ6 Metal dependent phosphohydrolase n=1 Tax=Geobacter sp. FRC-32 RepID=B9LZJ6_GEOSF Length = 452 Score = 42.1 bits (97), Expect = 0.013, Method: Composition-based stats. Identities = 29/204 (14%), Positives = 58/204 (28%), Gaps = 24/204 (11%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 + K ++V +A+ + G R +L + +L+R A + Sbjct: 7 RFKLSFVSFLLVTAVIAVSSVAVMGIM------DRFLLGELVKRGTSLSRGAANTAAFGL 60 Query: 65 RTDSPDEKRIQAILDQLTD-ESRILDAGVYDEQGDLIARSGESVEVRD------------ 111 D + ++ +L + + +L D G + A S Sbjct: 61 LA--HDRLVVDNLVAKLKERQPDVLYVAAVDHDGIITAHSDLRKNGARYEQKAPAKVISR 118 Query: 112 ---RLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLM 168 + GG + PI +G L LT+D TL + + Sbjct: 119 DVDGTMVTLDSRGGRDIYEFSTPIRFAARKIGSLHLTIDGVTLVDARGDARRMVALASGL 178 Query: 169 LLLSLAIGVVLTRTLLQGKRTRWQ 192 +L+ + + Q Sbjct: 179 ILVVAVLASYYLAGFFTTPIKKLQ 202 >UniRef50_C7R6I8 Putative uncharacterized protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R6I8_KANKD Length = 400 Score = 42.1 bits (97), Expect = 0.014, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 65/184 (35%), Gaps = 20/184 (10%) Query: 12 RAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDE 71 + LA+ +L+Q W ++ +Q+ + L + + + T D Sbjct: 47 ALIFSAIVLAISSSLLQ--LWLNEQQYQQQQNYINNYTEMLTTASSSQLGSFIHTQDKD- 103 Query: 72 KRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQIVEP 131 ++A+ L + I +Y G+L++ L+ + +V Sbjct: 104 -SLEAVAKGLYENDSIFKVSIYKRDGNLMS------------TLEADELPDDLR-SVVSD 149 Query: 132 IAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQGKRTRW 191 I ++ GYL L ++ QV ++ ++S ++L + K +W Sbjct: 150 IYYQDEKNGYLTLYFSPAVQSSLISQVVAQPVMIW---IISGFSWLILLFVVSFSKIRKW 206 Query: 192 QQSP 195 ++ Sbjct: 207 WKNR 210 >UniRef50_C5CZH7 Diguanylate cyclase n=1 Tax=Variovorax paradoxus S110 RepID=C5CZH7_VARPS Length = 512 Score = 42.1 bits (97), Expect = 0.015, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 14/122 (11%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQV---T 57 M R A + + CL+LL + + +Q N L+R +A+Q Sbjct: 1 MIRGPSITARTMAFVAVVCLSLLAIDFWNSWEARTDQLQQMNVATSNLSRAMAQQADDTI 60 Query: 58 LNVAPLMR----------TDSPDEKRIQAILD-QLTDESRILDAGVYDEQGDLIARSGES 106 ++ TD D R++ +L ++ + ++ +YD+ G+ IA S + Sbjct: 61 KKADTVLVGMVERVEHDGTDPSDVARLRQLLALRVAELPQLDGLHIYDQDGNWIANSRPT 120 Query: 107 VE 108 Sbjct: 121 RP 122 >UniRef50_B4RXD9 Diguanylate cyclase/phosphodiesterase n=2 Tax=Alteromonas macleodii RepID=B4RXD9_ALTMD Length = 673 Score = 41.7 bits (96), Expect = 0.015, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 56/150 (37%), Gaps = 10/150 (6%) Query: 45 LEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSG 104 + + L+ + L ++ LM+ + + + ++ + + +L A +YD +I+ Sbjct: 24 VADNTAALSNSLALQLSILMQKNPGNNALLSSVFQPVKEHPYLLSATLYDNDYRVISTVQ 83 Query: 105 --ESVEVRDRLALDGKKAGGYFNQQIVEPIAGKN------GPLGYLRLTLDTHTLATEAQ 156 +S++ D + + Q + I P+G+L + +DT+ + Sbjct: 84 PKQSLKFDDEAVPTSPENVPFGIAQYEDVITAHQIIGSSLYPMGHLVIYVDTNEVKASNS 143 Query: 157 --QVDNTTNILRLMLLLSLAIGVVLTRTLL 184 Q+ + LL + LL Sbjct: 144 TRQLIKQVPFILAFWLLCTGTCFFIFYRLL 173 >UniRef50_Q12RH2 Sensor protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12RH2_SHEDO Length = 853 Score = 41.7 bits (96), Expect = 0.015, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 55/180 (30%), Gaps = 18/180 (10%) Query: 7 KFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRT 66 K + + + + L+ A SQ+ + L++ + N + Sbjct: 14 KLSILKKIQYSIIAFAFLVLVITAISLSQSANSHFHQSTTRELTVLSQVLADNSRAALTF 73 Query: 67 DSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARS---GESVEVRDRLALDGKKAGGY 123 + +IL ++ I+ A +Y + + S L LD + Sbjct: 74 NDQSAAA--SILSAVSKNPDIISAVLY--KDKQVFASYPLDAQTPELSSLHLDETISFKQ 129 Query: 124 FNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTL 183 + PI + +G+LRL Q N + L ++ A V L Sbjct: 130 GYFSALAPITVNDNIVGWLRL-----------QSKLNVWKQVWLRFFITFAGLVFAVAVL 178 >UniRef50_B4S2L1 Sensor protein n=3 Tax=Alteromonadales RepID=B4S2L1_ALTMD Length = 560 Score = 41.7 bits (96), Expect = 0.015, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 3/99 (3%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRN-PQLEELARTLARQVTLNVAP 62 K +++ + +++ + S + Q + +LE A LA+ V + A Sbjct: 15 DKAVKLSIKSLFLWVVMSITTFSLAVLSSLAVYTQIKTYRHELESNALMLAKLVARSAAT 74 Query: 63 LMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIA 101 + ++P +RI+A L LT +L+A VY Q +A Sbjct: 75 YLYDETP--ERIEAALSNLTAAEHVLNAHVYKAQNKSLA 111 >UniRef50_D0XZE5 Sensor protein n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XZE5_9CAUL Length = 575 Score = 41.7 bits (96), Expect = 0.016, Method: Composition-based stats. Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 13/147 (8%) Query: 38 QRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQG 97 Q++R Q E R LA + +A D + + + + G YD QG Sbjct: 44 QQERLRQAEVQLRILAGSMAAPLA------FDDRSAAREYVGAQSSNPDVEAVGAYDMQG 97 Query: 98 DLIARSGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLG--YLRLTLDTHTLATEA 155 L A + + G + P+ LG YLR L++ T Sbjct: 98 ALAAGYTRAGAPPPPRNVLGPPRMDGARLVLTAPVTEDGTVLGSVYLRTVLESPT----- 152 Query: 156 QQVDNTTNILRLMLLLSLAIGVVLTRT 182 ++V L+++ +L I V+ + Sbjct: 153 RRVMRYAGFALLIVMAALLIAVLGAAS 179 >UniRef50_B8DQH2 Sensor protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DQH2_DESVM Length = 729 Score = 41.7 bits (96), Expect = 0.017, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 30/83 (36%) Query: 35 QNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYD 94 Q L E +L R +R + E R+Q +L+++ D+ I V D Sbjct: 71 DGEQESMRRILSEKGASLIRAFEAGARTGLRGRTGGELRLQVLLEEMADQPDIQFIAVTD 130 Query: 95 EQGDLIARSGESVEVRDRLALDG 117 QG ++A S R Sbjct: 131 RQGVVLAHSDPQWVGRSLADPAT 153 >UniRef50_B3E6P9 Sensor protein n=1 Tax=Geobacter lovleyi SZ RepID=B3E6P9_GEOLS Length = 491 Score = 41.3 bits (95), Expect = 0.020, Method: Composition-based stats. Identities = 35/235 (14%), Positives = 79/235 (33%), Gaps = 24/235 (10%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 M R + + +I + +AL L +W ++ + LE R + ++ + Sbjct: 1 MTRRFISIKTQFVLIAMLMVALSSTLWGVFAWKTERN--LLYSNLENEGRQMLTSLSSPI 58 Query: 61 APLMRTDSPDEKRIQAILDQLTDESR------ILDAGVYDEQGDLIARSGESVEVRDRLA 114 + + +LD +E ++ A V D+ G ++A + + + Sbjct: 59 INALVYEEMGVIEEGGLLDNFIEEIMKNSTLKVVSAFVTDQNGKVLAHNQYTEYGKQYDD 118 Query: 115 LDGKKAGGYFNQQ---------------IVEPIAGKNGPLGYLRLTLDTHTLATEAQQVD 159 L + A Q + P+ G LR+ + T L + Q + Sbjct: 119 LLTRTAITEGRYQASLQKQPGQSGTLLNMAMPLHIYQKSWGALRVVVSTAPLEAQLQGLA 178 Query: 160 NTTNILRL-MLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKK 213 L LL +A ++ R++ + + + + T + V + + Sbjct: 179 KRIAATSLAFFLLGMAASYLIGRSMARPLQRLSEIMASVSTDNLLVELPPDRPDE 233 >UniRef50_Q55838 Sensor protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55838_SYNY3 Length = 806 Score = 41.3 bits (95), Expect = 0.020, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 5/137 (3%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELART--LARQVTL 58 M + K +F +L AL++ + + Q Q ++ + R L + Sbjct: 1 MVQEKPRFTRPLRYQLLAGCALILMITSAIAVVLTRQQLQEKSRINIITRAQRLTEGLEF 60 Query: 59 NVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVR-DRLALDG 117 L+ T D R+ + + + D G LIA GE VR ++ A Sbjct: 61 AAEGLVET--KDVYRLNRLAQNYATWPNVQTISIVDPNGILIAHGGEIKMVRGEKYAQVT 118 Query: 118 KKAGGYFNQQIVEPIAG 134 F Q + I Sbjct: 119 PALFPIFEQVSISGIPQ 135 >UniRef50_C8WZA5 Sensor protein n=2 Tax=Desulfohalobiaceae RepID=C8WZA5_DESRD Length = 475 Score = 41.3 bits (95), Expect = 0.020, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 43/120 (35%), Gaps = 12/120 (10%) Query: 7 KFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM-- 64 F+L + + +L ++ A + ++ + + A LA + + Sbjct: 12 PFQLVKFLSWSSLFIILGSIFFLALTIGNSAKQAVMQKHRDFALLLAENLNHQIYQRFTL 71 Query: 65 ----------RTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLA 114 + +R++ + +LD +YD +G ++ + +++ + LA Sbjct: 72 PTVLGFGRIQLKNEAQYQRLEETIQSTIHSFHVLDVRIYDWEGMVVYSTDKTLVGKAGLA 131 >UniRef50_A0PYF6 Sensor protein n=2 Tax=Clostridium RepID=A0PYF6_CLONN Length = 485 Score = 41.3 bits (95), Expect = 0.023, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 74/182 (40%), Gaps = 13/182 (7%) Query: 4 TKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPL 63 KLK L + IV+ L +++A+M +++ + L L +++ Sbjct: 1 MKLKNWLISSYIVVMILPIIIAIMVYNGIKFCSNRVELEYYLNTLG-IISKYENRLENLS 59 Query: 64 MRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARS-------GESVEVRDRLALD 116 + + ++ + LD+ +++ +++ VYD G LI S SV + + Sbjct: 60 IYKNLHEKVNL---LDK--EDNGLIEIDVYDNYGTLIYSSEDKNSIVSNSVNIDELYKNL 114 Query: 117 GKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIG 176 Y I P+ + +G+ ++ + + + V + I+ ++ L+ + +G Sbjct: 115 YVIKREYNYNVIKRPVFSGDKIVGFYKIKILKNDVVNNINSVVILSIIVFILALIEVFVG 174 Query: 177 VV 178 + Sbjct: 175 TI 176 >UniRef50_C0QF75 Sensor protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QF75_DESAH Length = 941 Score = 41.3 bits (95), Expect = 0.023, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 15/148 (10%) Query: 2 ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 K KF + L L + + WF QR +L+ L++ + T + Sbjct: 8 LSVKQKFNTIILGVCSTILLLTFTIAFISQWFLY--QRNALEELQSLSKIIGDNSTAALL 65 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIAR---SGESVEVRDRLALDGK 118 D++ ++ L L ++ IL + +Y G +A G R+ Sbjct: 66 ------FQDDEALENNLHSLAQKTSILTSAIYRADGARVASFSRGGHQQISPQRVKNTEL 119 Query: 119 KAGGY----FNQQIVEPIAGKNGPLGYL 142 + GY QI+ PI N +G L Sbjct: 120 EEKGYMIHDGRIQILTPIILDNERVGTL 147 >UniRef50_Q5WGW0 Sensor protein n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WGW0_BACSK Length = 480 Score = 40.5 bits (93), Expect = 0.034, Method: Composition-based stats. Identities = 21/156 (13%), Positives = 50/156 (32%), Gaps = 10/156 (6%) Query: 38 QRQRNPQLEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLT-DESRILDAGVYDEQ 96 Q R + E + V +++ + ++ L +L + + G+Y + Sbjct: 28 QLNRVAKEESSNHLESMIVAKSISRTLNQNAQMFDGSAKELGRLALKQHENVQLGLYSKD 87 Query: 97 GDLIARSGE-----SVEVRDRLALDGKKAGGYFNQQIV--EPIAGKNGPLGYLRLTLDTH 149 L +S + + + + + EPI ++ GY L D Sbjct: 88 RALQFQSSSEEGGFATHLTPEAMFSNLYSWQSSDSAYIYKEPIFLQDQIAGYFELHFDKS 147 Query: 150 TLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQ 185 + E ++V T + L+ ++ + Sbjct: 148 GIRKETKEVYMLT--ILFFLITVGITLFIVQHWFKR 181 >UniRef50_Q08V63 Sensor protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08V63_STIAU Length = 502 Score = 40.5 bits (93), Expect = 0.036, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 60/183 (32%), Gaps = 3/183 (1%) Query: 7 KFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRT 66 + L + L +L ++ + L E A++LA + V+ + Sbjct: 10 EKPLTVKLAGLLSAVILATILSLSISLISTLTSNTEDLLHERAKSLATVMATLVSAAIEF 69 Query: 67 DSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQ 126 + + L L + A +Y G +A+ GE L + Sbjct: 70 EH--TEAATERLSALAKSPDAIYAAIYAPDGTRLAQWGEVPPSSPFLLPVLIATSKMDHH 127 Query: 127 QIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLL-LSLAIGVVLTRTLLQ 185 + + + L + +A + + +LL + + +GV++ +++Q Sbjct: 128 HLQAAVPVGDTLHSSLVIAFSRAEQHRQAAAIIQAALLTSGLLLPIMILLGVLVATSIVQ 187 Query: 186 GKR 188 R Sbjct: 188 PIR 190 >UniRef50_A1W3H9 Sensor protein n=1 Tax=Acidovorax sp. JS42 RepID=A1W3H9_ACISJ Length = 675 Score = 40.2 bits (92), Expect = 0.045, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 77/213 (36%), Gaps = 35/213 (16%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 L ++ L L +LV + S+ + QL++ A+ LARQ+ + + S Sbjct: 21 LRGRLMWLAMLPVLVFAVVWGSYVIRQRDADLAAQLQQRAQLLARQLAVAADYGIF--SF 78 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQGDLIA-----RSGESVEVRDRLALDGKKAGGYF 124 ++ + I + ES ++ A + G ++A G+++ A+ G Sbjct: 79 NQAALDNIALGVLRESSVISATIIAADGRVLATRHAPAQGQAIPPGQLQAMLEASRRGGG 138 Query: 125 NQ-------------QIVEPIAGKNG------------PLGYLRLTLDTHTLATEAQQVD 159 + P+ + P G++ + + T ++ TE + Sbjct: 139 GGVSEHNAHWVAHLEPVRTPLLDVDDLPEAAHPQRHAPPQGHVIVQVSTRSIRTE---LF 195 Query: 160 NTTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQ 192 + + ++L L G V+ R + R Q Sbjct: 196 DFGLRVMVLLAGVLLSGWVMARRISTSLDQRIQ 228 >UniRef50_UPI0001699252 hypothetical protein Epers_05292 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699252 Length = 304 Score = 40.2 bits (92), Expect = 0.047, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 50/142 (35%), Gaps = 10/142 (7%) Query: 53 ARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDR 112 +Q + + + D+ ++ ++++ ++ A V + IA ++ D Sbjct: 6 LQQFAHSASEPLLA--EDQLALEGLVNRQLKNRNLVGAVVSGIKQLHIAAGTNPEKLPDP 63 Query: 113 LALD--GKKAGGYFNQQIV---EPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRL 167 ++ + +V PI G +TLD L + Q + N++ Sbjct: 64 SKPYYWTDRSKPNIKRPLVTFSNPILFNKIKAGEAYVTLDRAFLDSYRQTI---INVIAG 120 Query: 168 MLLLSLAIGVVLTRTLLQGKRT 189 LL + I LT L + Sbjct: 121 ATLLLIVIASFLTYGLSRQLAR 142 >UniRef50_B2JLF0 Diguanylate cyclase/phosphodiesterase n=3 Tax=Burkholderia RepID=B2JLF0_BURP8 Length = 637 Score = 40.2 bits (92), Expect = 0.048, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 67/189 (35%), Gaps = 15/189 (7%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSP 69 L R++ + + + VAL+ L ++AR A V+ NV+ + Sbjct: 11 LTRSLGRVNLIGVTVALLISGIVLLVYQAVSLRASLTDIARLQAAMVSENVSAALVFG-- 68 Query: 70 DEKRIQAILDQLTDESRILDAGVYDEQG---DLIARSGESVEVRDRLALDG---KKAGGY 123 D + +L + + V+D+ L AR G S R+ L+ + + Sbjct: 69 DRRAAGDVLQHMRSLPYVESVAVFDKDDARFVLYAREGVSDAERNEGTLESVSHPRRLSF 128 Query: 124 FNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTL 183 + + P+ LG + L +Q+ + + A +++ R + Sbjct: 129 EDVIVSAPVELNGEHLGTV-------VLVATTEQMQAQFQRYASFIFGASACALLIARFV 181 Query: 184 LQGKRTRWQ 192 + ++R Sbjct: 182 MTRMKSRLN 190 >UniRef50_C0GRI4 Sensor protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GRI4_9DELT Length = 487 Score = 40.2 bits (92), Expect = 0.048, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 19/188 (10%) Query: 8 FRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTD 67 F L A++V L L L +RQ Q++ +AR + L ++ + D Sbjct: 12 FSLRLALVVYVVLPLACILAVTGYLVLNALERQVEQQMQNDLELVARSIQLPLSHALERD 71 Query: 68 SPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFN-- 125 + IQA+ + A VYD+ G IA +G + ++ L A G Sbjct: 72 -REGSMIQALESAFAIGR-VYSANVYDKDGQEIASAGRTDPDPEKDKLTELAAEGERRGE 129 Query: 126 ---------QQIVEPIA-GKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAI 175 P+ G L+LT + + + ++ L +A+ Sbjct: 130 YGHVAGREVYSYFVPLTDSGGRISGLLQLTRRESDFKEDISAI-----RTKGVMGLGVAV 184 Query: 176 GVVLTRTL 183 + L Sbjct: 185 FFMSALVL 192 >UniRef50_B8K775 Putative sensor protein CitS n=2 Tax=Vibrionaceae RepID=B8K775_VIBPA Length = 528 Score = 40.2 bits (92), Expect = 0.052, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 68/208 (32%), Gaps = 17/208 (8%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNV 60 MA + +L C AL + + ++ + Q+ A+ ++Q++ Sbjct: 1 MATQLFPRSFTMHLTLLLCGALSLGSVGWWLMSTERLNQVLAEQVALRAQVQSQQLSRLP 60 Query: 61 APLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKA 120 + L D + +I++QL + V D+ G +A +S + D + A Sbjct: 61 SLLDAVARQDAAAVTSIVEQLQKATDADFITVSDKNGIRLAHPVKSRIGFPVVGGDIEHA 120 Query: 121 GGYFNQQIVEPI--------------AGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILR 166 + + K +G +++ ++A D + L Sbjct: 121 LETGESYLSHSVGSLGPSVRYITPLFGHKGEVIGMIKVGYLKQSIAVLN---DQMLSPLL 177 Query: 167 LMLLLSLAIGVVLTRTLLQGKRTRWQQS 194 L SL + + + R + Q Sbjct: 178 LFAGFSLLVSGLAAWRFSRYVRDKMQHL 205 >UniRef50_Q2SQE9 Sensor protein n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SQE9_HAHCH Length = 508 Score = 40.2 bits (92), Expect = 0.056, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 48/124 (38%), Gaps = 8/124 (6%) Query: 1 MARTKLKFR------LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLAR 54 + + + + R L R ++ L + ++ A+ + R + LE+ A LA Sbjct: 11 LPKDRKQKRQPHSAYLRRRLMTLTSIIIVSMFALEAAVTAWYDYRAQLANLEKEAYLLAD 70 Query: 55 QVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLA 114 +A + + D I ++ L I+ + G++IA +G+ + ++ Sbjct: 71 AQRSVLAAAVW--NFDFDIINNAVNNLFSMPEIMQVAIRYPDGEVIASAGKLSDGAAQMR 128 Query: 115 LDGK 118 + Sbjct: 129 ITRP 132 >UniRef50_Q6LIJ7 Sensor protein n=3 Tax=Photobacterium profundum RepID=Q6LIJ7_PHOPR Length = 617 Score = 39.8 bits (91), Expect = 0.059, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 67/207 (32%), Gaps = 15/207 (7%) Query: 10 LHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEE-LARTLARQVTLNVAPLMRTDS 68 L V+ L+ + + ++E L + + ++ D Sbjct: 10 LWLKYAVMISFITLILCLISGEIVRVYEKNYLEEKVERQLQQYFTVLTAATIEDVLTEDI 69 Query: 69 PDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYFNQQI 128 P + I + +D + ++++Q +A G + QI Sbjct: 70 PHLETILEYVT--SDIPDLSYVAIHNDQDKTLATWGV-----------KPLDNSTESSQI 116 Query: 129 VEPIAGKNGPLGYLRLTLDTHTLATEA-QQVDNTTNILRLMLLLSLAIGVVLTRTLLQGK 187 + I+ + G + + + + + V+ + + LLL + + + LL Sbjct: 117 YKTISVEGEIFGSMSIAISKNNFINDIDHHVEQMRFLSAISLLLLGVLSYFICQYLLLSP 176 Query: 188 RTRWQQSPFLLTASKPVPEEEESEKKE 214 T+ L + P+E +E+ E Sbjct: 177 LTKINNKLLSLKCLQKTPKEPLTEQSE 203 >UniRef50_B2TPL4 Hypothetical Methyl-accepting chemotaxis protein n=3 Tax=Clostridium botulinum RepID=B2TPL4_CLOBB Length = 559 Score = 39.8 bits (91), Expect = 0.060, Method: Composition-based stats. Identities = 22/181 (12%), Positives = 56/181 (30%), Gaps = 16/181 (8%) Query: 1 MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNH-QRQRNPQLEELARTLARQVTLN 59 M ++ + ++++ L L+ + + S + + L + + QV Sbjct: 1 MKSDRVIKKSIKSLLTGVILVSLLVIFSLTTIISIFNIKNSMTNVLLNKSVEVVNQVKSL 60 Query: 60 VAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSG--------------E 105 V ++ D ++Q ++++ I + D+ IA S Sbjct: 61 VEYIIENQDNDINQLQELVEKKAKLDNIAYVVIVDKNIKAIAHSDKQKLGKVYDDDYIKN 120 Query: 106 SVEVRDRLALDGKKAGGYF-NQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNI 164 +V+ + + I+ PI G LR+ + + + Sbjct: 121 AVKEGETKSRKFYADVQKIWTYDIIVPIEVNGELYGSLRIGIPISGIDAVINDFAKVQIL 180 Query: 165 L 165 + Sbjct: 181 V 181 >UniRef50_B4S142 Sensor protein n=5 Tax=Alteromonadales RepID=B4S142_ALTMD Length = 444 Score = 39.8 bits (91), Expect = 0.064, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 74/209 (35%), Gaps = 17/209 (8%) Query: 11 HRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQV-TLNVAPLMRTDSP 69 + + +L+ + Q S+ S + + +++ LA QV ++ L+ T+ Sbjct: 7 SAFGQTVMLIGVLLLINQIVSYISVTYYFIQPS-YQQINSLLATQVKSVLANDLLVTNQE 65 Query: 70 DEKRIQAILDQLTDESRI-----LDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYF 124 R + + L++ VY G + ++ E + + + Sbjct: 66 TRDRYFQKTQVHVFDESVAKQNGLESAVY--YGYISSQVSEQLSQLADVRISTTTQASDE 123 Query: 125 NQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLL--LSLAIGVVLTRT 182 N + I+ P ++ + + + + + + LM++ LS+A G + R Sbjct: 124 NAPYIVWISLNRYPDTWISIPISG------LNEANISPLTMYLMVIGILSVAGGWLFVRR 177 Query: 183 LLQGKRTRWQQSPFLLTASKPVPEEEESE 211 + + + + + P P E+ Sbjct: 178 MTRPLSALQKAAISVGKGEHPAPLREQGS 206 >UniRef50_Q1NX05 Sensor protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NX05_9DELT Length = 579 Score = 39.8 bits (91), Expect = 0.064, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 58/195 (29%), Gaps = 31/195 (15%) Query: 2 ARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVA 61 + RL +++ + ++ + LEE T+AR ++ Sbjct: 5 LKETFGKRLSLIILLSAAVISTGLII--------AERALLKSDLEERGATIARILSSVTL 56 Query: 62 PLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAG 121 + S D +Q ++ + I V G L+A GE + + L Sbjct: 57 DALL--SHDYATMQRYTAEIAGDDSIRSIAVIRHDGRLLA--GELPDQGPGILLAE---- 108 Query: 122 GYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTR 181 PI + LG +R+ T L T I +LL+ ++ Sbjct: 109 --------HPIRLGDEELGLIRIGFSTARLDTIT-----WWIIAATVLLV--VALHLIGL 153 Query: 182 TLLQGKRTRWQQSPF 196 R P Sbjct: 154 LFTDLVLKRTVLFPL 168 >UniRef50_Q39V26 Sensor protein n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39V26_GEOMG Length = 537 Score = 39.8 bits (91), Expect = 0.068, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 68/179 (37%), Gaps = 8/179 (4%) Query: 11 HRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLMRTDSPD 70 + ++L +A + + ++ L +L Q + + S + Sbjct: 9 IKRKMMLISMATTGVALLISGVVLIFNEMVSYR--RSLVNSLTVQARITGSNSTAALSFN 66 Query: 71 EKRI-QAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGK--KAGGYFNQQ 127 R+ +L L+ I+ A ++ +G++ AR + E ++ K + + Sbjct: 67 NPRVAHEMLGALSAAPNIVQATIHTREGEVFARYLRTGERVKPISPPPKNGYSIAANSIV 126 Query: 128 IVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDNTTNILRLMLLLSLAIGVVLTRTLLQG 186 +VEPI P+G + + D L ++ T I+ ++ SL + +L + + Sbjct: 127 VVEPIILDQEPIGTILIESDLREL---HGRLGWYTAIMVIVFSGSLWVAFLLLSRMQRA 182 >UniRef50_A4VGG8 Sensor protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VGG8_PSEU5 Length = 492 Score = 39.4 bits (90), Expect = 0.091, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 58/153 (37%), Gaps = 14/153 (9%) Query: 5 KLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQLEELARTLARQVTLNVAPLM 64 + L A+++ + L+ + +S +R +L+ +AR V L ++ + Sbjct: 8 QRPASLRGALLLKVIVPLMAIMFGFSSVVLWTVERNSERRLQAEVELVARAVRLPLSASL 67 Query: 65 RTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIARSGESVEVRDRLALDGKKAGGYF 124 + +Q +L+ + R+ A VYD G L A +G +D A+ GG Sbjct: 68 EKNHERT--LQQVLESVLGVGRVYGAYVYDRDGKLAAYAGAVEPDQDASAIQQLTEGGEL 125 Query: 125 N-----------QQIVEPIAGKNGPL-GYLRLT 145 P+ G + G L++T Sbjct: 126 TGEYQRINGRPVYSYFVPLEESGGQINGLLQVT 158 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.124 0.274 Lambda K H 0.267 0.0380 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 822,679,348 Number of Sequences: 3077464 Number of extensions: 23743020 Number of successful extensions: 158571 Number of sequences better than 1.0e-01: 213 Number of HSP's better than 0.1 without gapping: 60 Number of HSP's successfully gapped in prelim test: 240 Number of HSP's that attempted gapping in prelim test: 158362 Number of HSP's gapped (non-prelim): 313 length of query: 214 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 91 effective length of database: 661,868,284 effective search space: 60230013844 effective search space used: 60230013844 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 90 (39.4 bits)