BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (231 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_B1LEQ4 Electron transport complex protein rnfE n=88 Tax... 457 e-127 UniRef50_A5F2S7 Electron transport complex protein rnfE n=71 Tax... 300 3e-80 UniRef50_B8D723 Electron transport complex protein rnfE n=5 Tax=... 231 2e-59 UniRef50_Q0VP36 Electron transport complex protein rnfE, putativ... 219 5e-56 UniRef50_C5BTA2 Electron transport complex, RnfABCDGE type, E su... 208 1e-52 UniRef50_Q9F5Y1 Electron transport complex protein rnfE n=15 Tax... 201 1e-50 UniRef50_A1F5P3 Electron transport complex protein RnfE n=1 Tax=... 200 3e-50 UniRef50_C1D6V3 NADH-ubiquinone oxidoreductase n=4 Tax=Betaprote... 194 2e-48 UniRef50_Q2W403 Electron transport complex protein rnfE n=3 Tax=... 191 1e-47 UniRef50_A0L5G3 Electron transport complex, RnfABCDGE type, E su... 191 2e-47 UniRef50_Q5P1B5 NADH:ubiquinone oxidoreductase, subunit RnfE n=3... 185 1e-45 UniRef50_D0L1N2 Electron transport complex, RnfABCDGE type, E su... 184 2e-45 UniRef50_Q3A7X1 NADH:ubiquinone oxidoreductase, RnfE subunit-lik... 183 5e-45 UniRef50_D0D1S5 SoxR-reducing system protein RsxE n=2 Tax=Proteo... 182 1e-44 UniRef50_A6V1T4 Electron transport complex protein rnfE n=182 Ta... 179 5e-44 UniRef50_C6BZT1 Electron transport complex, RnfABCDGE type, E su... 176 5e-43 UniRef50_C7LXH4 Electron transport complex, RnfABCDGE type, E su... 176 8e-43 UniRef50_A1VAS6 Electron transport complex, RnfABCDGE type, E su... 175 1e-42 UniRef50_Q315L1 Electron transport complex, RnfABCDGE type, E su... 171 2e-41 UniRef50_D1Y5W2 Na(+)-translocating NADH-quinone reductase subun... 171 2e-41 UniRef50_A7HK22 Electron transport complex, RnfABCDGE type, E su... 170 4e-41 UniRef50_B8J067 Electron transport complex, RnfABCDGE type, E su... 170 5e-41 UniRef50_D1B8H9 Electron transport complex, RnfABCDGE type, E su... 167 2e-40 UniRef50_C5SAZ4 Electron transport complex, RnfABCDGE type, E su... 166 7e-40 UniRef50_B8FN67 Electron transport complex, RnfABCDGE type, E su... 159 7e-38 UniRef50_A1WT45 Electron transport complex, RnfABCDGE type, E su... 158 1e-37 UniRef50_C8WMP6 Electron transport complex, RnfABCDGE type, E su... 157 4e-37 UniRef50_B2A682 Electron transport complex, RnfABCDGE type, E su... 156 6e-37 UniRef50_A9KRX0 Electron transport complex, RnfABCDGE type, E su... 153 4e-36 UniRef50_C7RDT4 Electron transport complex, RnfABCDGE type, E su... 151 2e-35 UniRef50_C7GZP2 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 151 2e-35 UniRef50_C0R023 SoxR-reducing system protein RsxE n=2 Tax=Brachy... 147 4e-34 UniRef50_Q1PW71 Strongly similar to Na(+)-translocating NADH:qui... 145 1e-33 UniRef50_Q73PG4 Na(+)-translocating NADH-quinone reductase, D su... 144 2e-33 UniRef50_D1VUK9 Electron transport complex protein RnfE n=1 Tax=... 143 6e-33 UniRef50_Q12W80 Electron transport complex protein rnfE n=2 Tax=... 142 7e-33 UniRef50_D1PN89 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 142 1e-32 UniRef50_B7UZU0 Na(+)-translocating NADH-quinone reductase subun... 132 6e-30 UniRef50_A5N7M8 RnfE n=5 Tax=Clostridiales RepID=A5N7M8_CLOK5 132 7e-30 UniRef50_C8PN80 Na(+)-translocating NADH-quinone reductase subun... 132 1e-29 UniRef50_D2MN20 Rnf-Nqr subunit, membrane protein (Fragment) n=4... 128 1e-28 UniRef50_A4SQL7 Na(+)-translocating NADH-quinone reductase subun... 126 6e-28 UniRef50_Q7VNU6 Na(+)-translocating NADH-quinone reductase subun... 121 2e-26 UniRef50_A6TT08 RnfA-Nqr electron transport subunit n=8 Tax=Bact... 120 4e-26 UniRef50_A8ZSV5 RnfA-Nqr electron transport subunit n=2 Tax=Desu... 110 4e-23 UniRef50_C1DEF3 Electron transport complex protein rnfA n=60 Tax... 100 6e-20 UniRef50_Q2LXT9 Sodium-translocating NADH-quinone reductase subu... 99 1e-19 UniRef50_A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase ... 98 3e-19 UniRef50_B7UWJ4 Electron transport complex protein rnfA n=85 Tax... 97 5e-19 UniRef50_Q3KM82 Na(+)-translocating NADH-quinone reductase subun... 94 3e-18 UniRef50_Q2NSZ5 Electron transport complex protein rnfA n=11 Tax... 86 9e-16 UniRef50_B8CY11 Electron transport complex, RnfABCDGE type, A su... 81 3e-14 UniRef50_A7FHZ1 Electron transport complex protein rnfA n=360 Ta... 80 8e-14 UniRef50_A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase ... 79 1e-13 UniRef50_A6L724 Na+-transporting NADH:ubiquinone oxidoreductase,... 77 3e-13 UniRef50_A6NPN3 Putative uncharacterized protein n=1 Tax=Bactero... 74 4e-12 UniRef50_C5SAZ5 Electron transport complex, RnfABCDGE type, A su... 73 9e-12 UniRef50_A7HKQ4 RnfA-Nqr electron transport subunit n=8 Tax=Bact... 72 1e-11 UniRef50_D2MN21 Electron transport complex, RnfABCDGE type, A su... 72 1e-11 UniRef50_A8ZY02 Electron transport complex, RnfABCDGE type, A su... 69 1e-10 UniRef50_B5YE59 Na(+)-translocating NADH-quinone reductase subun... 69 2e-10 UniRef50_A1WT44 RnfA-Nqr electron transport subunit n=13 Tax=Bac... 69 2e-10 UniRef50_C8WMP5 Electron transport complex, RnfABCDGE type, A su... 67 6e-10 UniRef50_C8R0U7 NADH:ubiquinone oxidoreductase, subunit E n=1 Ta... 65 2e-09 UniRef50_A6LW81 RnfA-Nqr electron transport subunit n=1 Tax=Clos... 63 6e-09 UniRef50_Q12W81 Electron transport complex protein rnfA n=2 Tax=... 62 2e-08 UniRef50_D1PJN1 Putative electron transport complex protein RnfE... 60 4e-08 UniRef50_Q3KM81 Na(+)-translocating NADH-quinone reductase subun... 60 5e-08 UniRef50_D2RN92 Electron transport complex, RnfABCDGE type, A su... 60 7e-08 UniRef50_A6DRQ4 Na(+)-translocating NADH-quinone reductase subun... 58 2e-07 UniRef50_A8ZSV6 RnfA-Nqr electron transport subunit n=1 Tax=Desu... 57 5e-07 UniRef50_C0QFQ8 RnfA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 56 8e-07 UniRef50_UPI0000397FA3 COG4657: Predicted NADH:ubiquinone oxidor... 56 9e-07 UniRef50_Q73PG5 Na(+)-translocating NADH-quinone reductase, E su... 54 3e-06 UniRef50_B2A6W6 SoxR-reducing system protein RsxE n=1 Tax=Natran... 54 4e-06 UniRef50_A4MZD9 Na(+)-translocating NADH-quinone reductase subun... 54 4e-06 UniRef50_Q487D7 Na(+)-translocating NADH-quinone reductase subun... 53 7e-06 UniRef50_Q2LXT8 Sodium-translocating NADH-quinone reductase subu... 52 1e-05 UniRef50_Q9ZC45 Na(+)-translocating NADH-quinone reductase subun... 51 4e-05 UniRef50_B0MP92 Putative uncharacterized protein n=1 Tax=Eubacte... 50 6e-05 UniRef50_Q1Q255 Similar to Na(+)-translocating NADH-quinone redu... 48 3e-04 UniRef50_A8S6D1 Putative uncharacterized protein n=2 Tax=Faecali... 46 8e-04 UniRef50_Q3K7K5 Putative electron transport complex, RnfABCDGE t... 45 0.001 UniRef50_C0EE36 Putative uncharacterized protein n=1 Tax=Clostri... 45 0.002 UniRef50_UPI0001C372EE electron transport complex, RnfABCDGE typ... 45 0.002 UniRef50_Q4K753 Putative uncharacterized protein n=1 Tax=Pseudom... 45 0.003 UniRef50_A7C280 RnfA-Nqr electron transport subunit n=1 Tax=Begg... 44 0.003 UniRef50_A9NEB4 NADH oxidoreductase complex RnfABCDGE type, E su... 42 0.013 UniRef50_UPI0001699AE2 RnfA-Nqr electron transport subunit n=1 T... 42 0.021 >UniRef50_B1LEQ4 Electron transport complex protein rnfE n=88 Tax=Proteobacteria RepID=RNFE_ECOSM Length = 231 Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust. Identities = 229/231 (99%), Positives = 229/231 (99%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR Sbjct: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA Sbjct: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 KKGPALSALDGFSIGMGATCAM VLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD Sbjct: 121 KKGPALSALDGFSIGMGATCAMCVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGNV 231 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRR EAAAERALPNGETGNV Sbjct: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRTEAAAERALPNGETGNV 231 >UniRef50_A5F2S7 Electron transport complex protein rnfE n=71 Tax=Proteobacteria RepID=RNFE_VIBC3 Length = 230 Score = 300 bits (767), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 146/225 (64%), Positives = 185/225 (82%), Gaps = 3/225 (1%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MSE + +++ G+W NN ALVQLLGLCPLLAV+ST TNALGLG+AT LVL +N+T+S +R Sbjct: 1 MSENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P E+RIP++VMIIAS+V+ VQ+L+NAYA+GLY SLGIFIPLIVTNCI++GRAEAFA+ Sbjct: 61 DYVPKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRAEAFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K +ALDGF +G+G T + VLGSLREIIGNGTLFDGAD LLG WAKVLR+E+FH D Sbjct: 121 KNDVLPAALDGFWMGLGMTSVLVVLGSLREIIGNGTLFDGADLLLGEWAKVLRIEVFHFD 180 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKR---RAEAAAERA 222 S FLLA+LPPGAFIG+G ++A K +ID+++ R + + A ERA Sbjct: 181 SAFLLALLPPGAFIGVGFLIAAKSVIDKQIAARQPKQQKQAIERA 225 >UniRef50_B8D723 Electron transport complex protein rnfE n=5 Tax=Buchnera aphidicola RepID=RNFE_BUCAT Length = 227 Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 114/223 (51%), Positives = 154/223 (69%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 IK + LWKNNS+LVQLLGLCP+LA+T+ A NA+GLG+ TTLVLT+TN IS+ R Sbjct: 2 NIKSFLNNRLWKNNSSLVQLLGLCPVLAMTTNAINAIGLGMTTTLVLTITNTIISSFRKI 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P ++RIPIY+MII+SVV++++ML++AY F LYQSLGIFIPLIVTNCI+VGRA+ A K Sbjct: 62 IPKDLRIPIYMMIISSVVTSIEMLLHAYTFNLYQSLGIFIPLIVTNCIIVGRADLIAYKS 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 S DG IG+G+ AMF +GS+REI+GNGTLF GA+ ++ + + + Sbjct: 122 SIVESFFDGIFIGLGSMFAMFAVGSIREILGNGTLFFGANKIISNIHSSVFFTLLDKKFT 181 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPN 225 +LA+ PPG F+ LG ++A K ID KK + + + N Sbjct: 182 IILAVFPPGGFLILGFLIAIKNFIDLYYKKNTIKNIEQCSCSN 224 >UniRef50_Q0VP36 Electron transport complex protein rnfE, putative n=10 Tax=Gammaproteobacteria RepID=Q0VP36_ALCBS Length = 238 Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 109/223 (48%), Positives = 155/223 (69%), Gaps = 2/223 (0%) Query: 1 MSEI--KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIST 58 MS++ K + + GLW NN A VQ+LGLCPLLAVT + NA+GLGLAT +VL +N +S Sbjct: 2 MSDVNYKKISMDGLWNNNPATVQILGLCPLLAVTGSVVNAMGLGLATLVVLMGSNACVSL 61 Query: 59 LRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 +RH+ +R+P +VMIIA++V+ ++ML+ AY F LY+ LGIFIPLIVTNC V+GRA+AF Sbjct: 62 IRHYVTDAVRLPAFVMIIAAMVTVIEMLMQAYTFELYEILGIFIPLIVTNCTVLGRADAF 121 Query: 119 AAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFH 178 A+K + +DG +GMG + +LG +RE++G GTLF L G A + + Sbjct: 122 ASKNAVLPAMVDGVMMGMGFLVILLILGGMRELVGQGTLFSNMQLLFGPMAAHWELTVID 181 Query: 179 TDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAER 221 FLLA+LPPGAF+GLGL++AGK +ID+R+K+ + A++ Sbjct: 182 NYGGFLLAILPPGAFLGLGLIIAGKNVIDKRIKEVQKRKASDE 224 >UniRef50_C5BTA2 Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Proteobacteria RepID=C5BTA2_TERTT Length = 253 Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 105/206 (50%), Positives = 148/206 (71%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 +D G+W+NN ALVQLLGLCP++AVT++ATN LG+G+ATT VL ++++ +S LRH P Sbjct: 31 RDYFSFGIWENNIALVQLLGLCPVMAVTTSATNGLGMGIATTAVLIISSVLVSALRHTIP 90 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 A++R P+ + IIA V+ V + +NA+ LY+ LG+FI LIVTNC ++GR EAFA K+ P Sbjct: 91 AQVRNPVMIAIIAGTVTLVDLAMNAWMHELYKVLGLFIALIVTNCAILGRTEAFAMKQPP 150 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 + DG +G+G T A+ +LG REI+G+GTLF A +LLGS + L + DS L Sbjct: 151 MAALADGVGMGLGFTWALVLLGGAREILGSGTLFAHASSLLGSHFEWLEITFVEVDSGVL 210 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERM 210 LA+LPPG FI LG+M+A K ++DER+ Sbjct: 211 LAILPPGGFIVLGIMIALKRVVDERI 236 >UniRef50_Q9F5Y1 Electron transport complex protein rnfE n=15 Tax=Bacteria RepID=RNFE_AZOVD Length = 238 Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 106/209 (50%), Positives = 141/209 (67%) Query: 12 LWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPI 71 LW+ N ALVQ+L LCP LAVT+TATN LG+GLATTLVL +TN IS++RH E+R P+ Sbjct: 25 LWQYNVALVQMLALCPTLAVTTTATNGLGMGLATTLVLVMTNALISSMRHTISPEVRNPV 84 Query: 72 YVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDG 131 + +IA VV+ M +NA+ LY+ LG+FI LIVTNC V+GRAE+F + S LDG Sbjct: 85 MIGVIAGVVTLTDMAMNAWMHELYKVLGLFIALIVTNCAVLGRAESFCLRNPVIPSILDG 144 Query: 132 FSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPG 191 +G G T + V+G +REI+G+GTLF A +LLGS K + + + LLA+LPPG Sbjct: 145 AGMGAGFTAVLVVIGGIREILGSGTLFSQASSLLGSHFKWMEITVIPDFQGILLAILPPG 204 Query: 192 AFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 AFI LG +LA K +ID + +RR + E Sbjct: 205 AFIVLGFLLAAKRVIDRKRAERRQQTHGE 233 >UniRef50_A1F5P3 Electron transport complex protein RnfE n=1 Tax=Vibrio cholerae 2740-80 RepID=A1F5P3_VIBCH Length = 177 Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 97/150 (64%), Positives = 125/150 (83%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E + +++ G+W NN ALVQLLGLCPLLAV+ST TNALGLG+AT LVL +N+T+S +R Sbjct: 1 MNENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P E+RIP++VMIIAS+V+ VQ+L+NAYA+GLY SLGIFIPLIVTNCI++GRAEAFA+ Sbjct: 61 DYVPKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRAEAFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLRE 150 K +ALDGF +G+G T + VLGSLRE Sbjct: 121 KNDVLPAALDGFWMGLGMTSVLVVLGSLRE 150 >UniRef50_C1D6V3 NADH-ubiquinone oxidoreductase n=4 Tax=Betaproteobacteria RepID=C1D6V3_LARHH Length = 239 Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 104/216 (48%), Positives = 147/216 (68%), Gaps = 3/216 (1%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 S K + G+WK N+ +VQLLGLCP+LAV+++ N + LGLAT LV L+ ++ +R Sbjct: 16 SPWKSIAFNGIWKQNAGVVQLLGLCPVLAVSTSIVNGVSLGLATALVTALSGAAVAAVRQ 75 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 W P+EIR PI++ IIA++V+ V + +NA+ GLY LGIFIPLI TNCIV+ RAEAFA+K Sbjct: 76 WVPSEIRNPIFITIIAALVTMVDLAMNAWVHGLYNVLGIFIPLITTNCIVLARAEAFASK 135 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 SA DG +G+G T + +LG++RE+ G GTLF G D + G A L + + + Sbjct: 136 NPVRESAWDGLMMGLGLTGVLGLLGAMRELFGKGTLFSGIDLVFGPAAGALTLHLAPENY 195 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEA 217 FLLA+LPPGAF+GL ++AGK ++ R RRA++ Sbjct: 196 QFLLALLPPGAFLGLACLIAGKNWLESR---RRAQS 228 >UniRef50_Q2W403 Electron transport complex protein rnfE n=3 Tax=Proteobacteria RepID=RNFE_MAGSA Length = 223 Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 99/214 (46%), Positives = 142/214 (66%) Query: 7 VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAE 66 +I GLW+NN L LLG+CP +A+T TATN LG+GLAT V+ +NL ++ R++ E Sbjct: 8 IIKDGLWENNGVLCMLLGMCPTMAMTGTATNGLGMGLATAAVMAASNLMVAMFRNYVTHE 67 Query: 67 IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPAL 126 +RIP+Y++I+A+ V+ V + +NA+ LY+ LG+FIPLIV+NC+ + R EAFAAK+ Sbjct: 68 VRIPVYILIVAANVTFVDLGMNAWMHELYKVLGLFIPLIVSNCLPLARLEAFAAKEPVLP 127 Query: 127 SALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLA 186 S LDG +G+G T A+ +G++RE+IG GTLF A LLG WAK+L + + D L+ Sbjct: 128 SFLDGLFMGLGFTLALTAIGAVREMIGQGTLFADAALLLGPWAKLLELRVMPADWGILVL 187 Query: 187 MLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 +LPPG F+ GLM+ K L+D K A A Sbjct: 188 ILPPGGFLIAGLMVVAKRLVDLAGGKEIKMAGAH 221 >UniRef50_A0L5G3 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Bacteria RepID=A0L5G3_MAGSM Length = 222 Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 103/229 (44%), Positives = 151/229 (65%), Gaps = 22/229 (9%) Query: 1 MSEI--KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIST 58 MSEI ++++ G W NN+ QLLG+CPLL VT+TA N +G+GLA+ +VL N+ ++ Sbjct: 1 MSEITNREIVANGFWNNNAVFAQLLGMCPLLGVTTTAMNGIGMGLASLVVLLGANVVVAM 60 Query: 59 LRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 +R + P+E+RIP Y+++IAS V+ V + +NA+ L++ LG+FIPLIV NC ++GRAEAF Sbjct: 61 VRSYIPSEVRIPSYIVVIASFVTIVDLCMNAWLHDLHKILGLFIPLIVVNCAILGRAEAF 120 Query: 119 AAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFH 178 A++ SA+DG + G+G T A+FVLG++REI+G G +F G D + SW+ FH Sbjct: 121 ASRNSVGKSAIDGIATGLGFTFALFVLGAVREILGAGEIF-GYDVM--SWSG------FH 171 Query: 179 TDSPFLLAMLPPGAFIGLGLMLAGKYLIDERM--------KKRRAEAAA 219 P L +LPPGAFI LG +L G ++ER K++RA A Sbjct: 172 ---PALGFVLPPGAFIALGFILMGVKWLNERRELAAAKKPKQKRASGEA 217 >UniRef50_Q5P1B5 NADH:ubiquinone oxidoreductase, subunit RnfE n=3 Tax=Rhodocyclaceae RepID=Q5P1B5_AZOSE Length = 232 Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/219 (45%), Positives = 146/219 (66%), Gaps = 8/219 (3%) Query: 10 QGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRI 69 GLWK N+ LVQLLGLCP+LAV+++ NA+ LGLAT +V+ ++N +++LR++ P EIRI Sbjct: 12 NGLWKQNTGLVQLLGLCPILAVSTSVVNAVSLGLATVVVMAVSNFAVASLRNFIPYEIRI 71 Query: 70 PIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSAL 129 P++++IIA++ + V + NAY LY LGIFIPLIVTNCIV+ R EA+AAK P S + Sbjct: 72 PVFILIIAALTTVVDLAFNAYLHDLYLVLGIFIPLIVTNCIVLARVEAYAAKNDPVASTV 131 Query: 130 DGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP-FLLAML 188 DG +G+G + VLG +RE++G+GTLF G + ++ + + +F D P FL+ +L Sbjct: 132 DGIMMGLGLVWLLGVLGGIRELVGSGTLFSGIEMVIPGLSP---LSVFGDDYPGFLIGVL 188 Query: 189 PPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 PPGAF LG ++A + R++ R A R + E Sbjct: 189 PPGAFFALGCLIA----LSNRIRMRAAAGKPARPASDSE 223 >UniRef50_D0L1N2 Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1N2_HALNC Length = 231 Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 102/232 (43%), Positives = 150/232 (64%), Gaps = 3/232 (1%) Query: 1 MSEI--KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIST 58 MS+I +D+ VQGLWKNN LVQ+LG+CP++A+++T N+LGL +AT L + ++N S Sbjct: 1 MSDISYRDLAVQGLWKNNPGLVQILGMCPMMAISNTVVNSLGLAMATILTMVVSNGLASV 60 Query: 59 LRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 +RHW E+R+P++VM++ASVV+ +++ +NAY LY LGIF+PLIVTNCIV+ R E F Sbjct: 61 IRHWVRPEVRLPVFVMVVASVVTVIELWMNAYLNTLYHVLGIFLPLIVTNCIVIARVEGF 120 Query: 119 AAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFH 178 AA+ S DG +G+G + LG +RE++G GTL A L G A + + Sbjct: 121 AARNPVLPSLYDGLMMGLGFGLVLVALGVIRELLGFGTLLANAQQLFGPMAANWTIHVLP 180 Query: 179 TDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGN 230 + FLLA+LPPGAF+ L +++A K I++ R A+ A LP T + Sbjct: 181 EQAHFLLAILPPGAFMALAILIAIKQAIEQCRAARLAQPVALE-LPKAATAS 231 >UniRef50_Q3A7X1 NADH:ubiquinone oxidoreductase, RnfE subunit-like n=3 Tax=Bacteria RepID=Q3A7X1_PELCD Length = 202 Score = 183 bits (464), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 102/218 (46%), Positives = 142/218 (65%), Gaps = 28/218 (12%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ + GLW+NN+ +LG+CP LAVT++A N LG+GLATT VL +N+ +S LR Sbjct: 2 KLWAIFSSGLWRNNAIFKLVLGMCPTLAVTTSAMNGLGMGLATTSVLLCSNMAVSALRTL 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 PA++RIP +++IIA+ V+ VQ+L+ AYAF LYQ+LGIFIPLIV NC+++GRAEAFA+++ Sbjct: 62 IPAKVRIPAFIVIIATFVTVVQLLMEAYAFELYQALGIFIPLIVVNCLILGRAEAFASRQ 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLF----DGADALLGSWAKVLRVEIFH 178 SA DG +G+G T A+ +LG +RE++G G+LF GA FH Sbjct: 122 PLWASAADGAGMGLGFTLALVMLGGVRELLGAGSLFGLQMTGAG--------------FH 167 Query: 179 TDSPFLLAMLPPGAFIGLGLMLAG-------KYLIDER 209 P LL +LPPGAF+ LG +LA K I ER Sbjct: 168 ---PMLLMILPPGAFLALGFLLAAINGWKNRKRSISER 202 >UniRef50_D0D1S5 SoxR-reducing system protein RsxE n=2 Tax=Proteobacteria RepID=D0D1S5_9RHOB Length = 321 Score = 182 bits (461), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 110/228 (48%), Positives = 144/228 (63%), Gaps = 5/228 (2%) Query: 1 MSEIKDVIVQ-GLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTL 59 MS+I I + GLW NN Q+L CPLLAVT TAT LG+GLATT VL + L +S L Sbjct: 1 MSDIYARIARDGLWDNNVVFGQMLAHCPLLAVTGTATKGLGIGLATTAVLVASGLAVSLL 60 Query: 60 RHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFA 119 R IRIP +V++IA +V+ V M +NA++ L+Q LG+FIPLIVTNC ++GRAEA A Sbjct: 61 RGAILPGIRIPAFVLLIACIVNVVDMALNAWSHDLHQVLGLFIPLIVTNCAILGRAEALA 120 Query: 120 AKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHT 179 ++ P SA DG +G+G T A+ VLG+ REI+G+GTLF A LLG L + + Sbjct: 121 SRNRPLASAFDGLMMGLGFTAALVVLGAAREILGSGTLFANASVLLGESVSFLEITVIPD 180 Query: 180 DSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 FLL +LPPG FI LG +LA K L ++R++ A R P G Sbjct: 181 YQGFLLLILPPGVFIVLGALLALKALAEQRVRTE----DARRNAPQGR 224 >UniRef50_A6V1T4 Electron transport complex protein rnfE n=182 Tax=Bacteria RepID=RNFE_PSEA7 Length = 239 Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 112/230 (48%), Positives = 154/230 (66%), Gaps = 3/230 (1%) Query: 1 MSE--IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIST 58 MSE ++++ GLW+NN LVQLLGLCPLL +++ NALGLGLAT LVL +N +S Sbjct: 1 MSEQGLREIARDGLWRNNPGLVQLLGLCPLLGTSNSTVNALGLGLATLLVLVCSNAAVSL 60 Query: 59 LRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 +R IR+P +VMIIA++ + +++L+ A+ + LYQ LGIFIPLI TNC+++GRAEAF Sbjct: 61 VRGAVSEAIRLPAFVMIIAALTTCIELLMQAWTYELYQILGIFIPLITTNCVILGRAEAF 120 Query: 119 AAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFH 178 AAK G ++ DG G+G + VLG LRE++G GTL L G A+ +++IF Sbjct: 121 AAKNGVLRASFDGLLTGLGFALVLLVLGGLRELLGQGTLLADMQLLFGPAAETWKIQIFP 180 Query: 179 TDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKR-RAEAAAERALPNGE 227 FLLA+LPPGAFI LGL++A K IDE + +R RA+A A P + Sbjct: 181 HYQGFLLAILPPGAFIMLGLLIALKNRIDESLAERARAQAGDVPASPQRQ 230 >UniRef50_C6BZT1 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Desulfovibrionales RepID=C6BZT1_DESAD Length = 228 Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 93/220 (42%), Positives = 137/220 (62%), Gaps = 13/220 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MS + +GLW LLGLCP+LAVTS+A N LG+G+A VLT++NL IS++R Sbjct: 1 MSRLVKEFAKGLWDELPPFRVLLGLCPVLAVTSSAENGLGMGMAVIFVLTMSNLIISSIR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 P ++RI +++I AS+V V++L+ AYA+ LYQ LGIF+PLIV NC+++GRAEAFA+ Sbjct: 61 KIIPTKVRIACFIVITASLVVTVELLMQAYAYPLYQKLGIFVPLIVVNCLILGRAEAFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K G LS D +G+G ++ LG++REIIG GT+F G + S+ Sbjct: 121 KNGVILSIADALGMGIGFAVSLTFLGAIREIIGAGTVF-GVPVMWESF------------ 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 P ++ PGAF+GLG++LAG + +++ E + Sbjct: 168 KPAEFMIMAPGAFVGLGVILAGMNAFNRYQSRKKGETVPD 207 >UniRef50_C7LXH4 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Desulfovibrionales RepID=C7LXH4_DESBD Length = 239 Score = 176 bits (445), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 96/215 (44%), Positives = 134/215 (62%), Gaps = 15/215 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ + +GLW +LGLCP+LAVT+TA N LG+G A VL+L+N+ IS +R Sbjct: 1 MASMMKEFTKGLWNELPPFRLVLGLCPVLAVTTTANNGLGMGAAVIFVLSLSNVIISLVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P ++RI ++ I AS+V V+ML+ A+A+ LYQ LGIF+PLIV NCI++GRAEAFAA Sbjct: 61 NIIPKKVRIVCFIAIAASLVVTVEMLMQAFAYPLYQQLGIFVPLIVVNCIILGRAEAFAA 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K P L+ DG +G+G T ++ LGSLREI G+GT F + +F D Sbjct: 121 KNPPLLALADGLGMGIGFTLSLTFLGSLREIFGSGTWFG--------------MSLFGPD 166 Query: 181 -SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRR 214 PF + PGAF+ LGL+LAG ++ KR+ Sbjct: 167 FHPFTFMVQAPGAFVCLGLILAGMNFLNVWQAKRK 201 >UniRef50_A1VAS6 Electron transport complex, RnfABCDGE type, E subunit n=11 Tax=Bacteria RepID=A1VAS6_DESVV Length = 223 Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/220 (44%), Positives = 134/220 (60%), Gaps = 13/220 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M +I +GLW+ +LGLCP LAVT TA+N LG+GLA VL L+N+ IS +R Sbjct: 1 MQQIIKEFTKGLWQELPPFRLVLGLCPTLAVTKTASNGLGMGLAVIFVLALSNMIISMVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P ++RI ++ I AS+V AV++L+ AYA+ LYQ LGIF+PLIV NCI++GRAEAFAA Sbjct: 61 NIIPKKVRIACFIAISASLVVAVELLMQAYAYPLYQQLGIFVPLIVVNCIILGRAEAFAA 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K +LS DG IG+G T ++ LG +RE+ G G LF G + + Sbjct: 121 KNPVSLSLADGLGIGLGFTLSLVFLGGIRELFGTGMLF-GTQVM------------WQGY 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 PF + + PGAFI LGL LA +I+ +R+ A E Sbjct: 168 QPFGIMVEAPGAFICLGLTLAAMNVINTWQARRKGLEAPE 207 >UniRef50_Q315L1 Electron transport complex, RnfABCDGE type, E subunit n=5 Tax=Bacteria RepID=Q315L1_DESDG Length = 224 Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/228 (41%), Positives = 132/228 (57%), Gaps = 13/228 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ + +GLW+ +LGLCP+LAVT +A N G+G+A VL L+N+ IS +R Sbjct: 1 MASMWKEFSKGLWREIPPFRLVLGLCPVLAVTKSANNGFGMGMAVIFVLFLSNVIISLVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P ++RI Y+ I AS+V A+++L+ AYA+ LYQ LGIF+PLIV NCI++GRAEAFA Sbjct: 61 NLIPKKVRIACYIAIAASLVVAIELLMQAYAYPLYQQLGIFVPLIVVNCIILGRAEAFAG 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K L+A DG IGMG ++ LGSLRE++G GT+F ++ Sbjct: 121 KNPVHLAAADGLGIGMGFCLSLTFLGSLREMLGTGTVFG-------------HQVMWQGF 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGET 228 P + PGAFI LGL+L L+ KR+ E P E+ Sbjct: 168 KPLTFMVEAPGAFISLGLVLGAMNLLSIVQAKRKGIPEPENPTPGCES 215 >UniRef50_D1Y5W2 Na(+)-translocating NADH-quinone reductase subunit d n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5W2_9BACT Length = 243 Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 98/222 (44%), Positives = 141/222 (63%), Gaps = 12/222 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MS IV GL+ N V +LG+CP +AVTS+A N L +GLA T VL +N+ IS LR Sbjct: 1 MSNPLKTIVNGLFAENPIFVLVLGMCPTIAVTSSAMNGLSMGLAATAVLIGSNVAISALR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P EIRIP ++++IA V+A+Q++I AY L ++LGIFIPLIV NCI++ RAEAFA+ Sbjct: 61 RFIPDEIRIPSFIVVIAGFVTALQLIIAAYFPALDKALGIFIPLIVVNCIILARAEAFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K G SA DG +G+G T A+ ++G++RE+IG G++F GA+ + + Sbjct: 121 KNGVFASACDGLGMGLGFTLALILIGAIRELIGAGSVF-GANVFAPGFYQ---------- 169 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERA 222 P LLA+L PG FI LG+++A + + R + + AE A Sbjct: 170 -PALLAILAPGGFITLGVLMAVMHQLKIRKELKSLAPLAESA 210 >UniRef50_A7HK22 Electron transport complex, RnfABCDGE type, E subunit n=26 Tax=Bacteria RepID=A7HK22_FERNB Length = 217 Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 91/213 (42%), Positives = 146/213 (68%), Gaps = 15/213 (7%) Query: 10 QGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRI 69 +G+ K+N VQ+LG+CP LA T++A N G+GLA T VL ++N+ IS++R P +IRI Sbjct: 10 KGIIKDNPTYVQVLGMCPTLATTTSAKNGFGMGLAATAVLVMSNVVISSIRKTVPEKIRI 69 Query: 70 PIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSAL 129 PI++ +IA+ V+ V +L++A+ + L+++LG+FIPLIV NCI++GRAEA+A+K G S L Sbjct: 70 PIFITVIATFVTIVDLLMHAFTYDLWKTLGLFIPLIVVNCIIMGRAEAYASKHGVLDSLL 129 Query: 130 DGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLP 189 DG +G+G T ++ +LGS+RE++GNG++FD + W K + + +LP Sbjct: 130 DGLGMGVGFTLSLTLLGSIRELLGNGSIFD-----ITIWGKAFNM---------FVMILP 175 Query: 190 PGAFIGLGLMLAGKYLIDERMKKRRAEAAAERA 222 PGA++ LGL+ A I + K+ RA+ +A++A Sbjct: 176 PGAYLTLGLLAALFAAISIK-KEERAKKSAQQA 207 >UniRef50_B8J067 Electron transport complex, RnfABCDGE type, E subunit n=24 Tax=Bacteria RepID=B8J067_DESDA Length = 225 Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 93/192 (48%), Positives = 124/192 (64%), Gaps = 13/192 (6%) Query: 10 QGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRI 69 +GLWK +LGLCP LAVT++A N LG+G+A VL L+N+ IS +R P +RI Sbjct: 9 KGLWKELPPFRLVLGLCPTLAVTNSADNGLGMGVAVIFVLVLSNMLISMVRSIIPKTVRI 68 Query: 70 PIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSAL 129 +++I AS+V AV++L+ AYA+ LYQ LGIF+PLIV NCI++GRAEAFAAK G A S Sbjct: 69 ACFIVIAASLVVAVELLMQAYAYPLYQRLGIFVPLIVVNCIILGRAEAFAAKNGVAASIA 128 Query: 130 DGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLP 189 DG +G+G T ++ LGSLREI GNGT F + ++ P + + Sbjct: 129 DGLGMGLGFTLSLTFLGSLREIFGNGTWFG-------------QSVMWEGFEPMRIMIQA 175 Query: 190 PGAFIGLGLMLA 201 PGAFI LGL+LA Sbjct: 176 PGAFICLGLILA 187 >UniRef50_D1B8H9 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Bacteria RepID=D1B8H9_THEAS Length = 239 Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 103/240 (42%), Positives = 141/240 (58%), Gaps = 33/240 (13%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ + I GL K N VQ +GLCP LAVT++A N LG+G+A T VL +N+ IS LR Sbjct: 1 MASFIERIRGGLAKENPVFVQAIGLCPTLAVTTSAVNGLGMGVAATAVLMGSNVVISMLR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P +IRIP ++++IA V+ +Q L++AYA L +SLGIFIPLIV NCI++ RAEAFA Sbjct: 61 RFIPNQIRIPAFIVVIAGFVTIIQFLVSAYAPVLDKSLGIFIPLIVVNCIILARAEAFAF 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K G S DG +G+G T A+ +LGS+REIIG GTLF G L G Sbjct: 121 KNGVIPSLFDGIGMGLGFTVALMILGSIREIIGAGTLF-GFHVLPGYV------------ 167 Query: 181 SPFLLAMLPPGAFIGLGLML---------------AGKYLID-----ERMKKRRAEAAAE 220 P L+ +L PG F+ +GL++ G LID +R++K+ A A + Sbjct: 168 QPALVMILAPGGFLTMGLIMGFLNYRRDLARRRRPGGTDLIDADSDADRLEKQTACAGCQ 227 >UniRef50_C5SAZ4 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Proteobacteria RepID=C5SAZ4_CHRVI Length = 220 Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 90/216 (41%), Positives = 136/216 (62%), Gaps = 19/216 (8%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 D ++GLW+ N V LLG+CP+LAVTST NA+ +GLATT VL ++L IS LR+W P Sbjct: 14 DTFLRGLWEENPVFVMLLGMCPVLAVTSTTLNAIAMGLATTFVLVCSSLLISLLRNWIPK 73 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 ++RI Y++IIA+ V+ V I A + LY +LG FI LIV NC+++GRAEA+A+K+ Sbjct: 74 QVRIASYIVIIATFVTIVDYAIQAISLELYAALGAFIQLIVVNCVILGRAEAYASKQRLH 133 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD-SPFL 184 + ++ +G+G T A+ LG++RE++GNGTL L + +F D P+L Sbjct: 134 TTLVNSLGMGVGFTLALLALGTVREVLGNGTL--------------LGIPLFGPDFQPWL 179 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 + +LPPG F LG+ L L+ +++ + AA+ Sbjct: 180 VMILPPGGFFVLGVWL----LLFNWLRQSKVRRAAQ 211 >UniRef50_B8FN67 Electron transport complex, RnfABCDGE type, E subunit n=8 Tax=Bacteria RepID=B8FN67_DESAA Length = 203 Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 92/201 (45%), Positives = 125/201 (62%), Gaps = 9/201 (4%) Query: 10 QGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRI 69 +GLW+ +LGLCP L VT+T N +G+GLATT VL NL +S LR P ++RI Sbjct: 11 KGLWQEIPPFRLVLGLCPTLGVTTTVQNGVGMGLATTFVLVCANLLVSALRKVIPPKVRI 70 Query: 70 PIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSAL 129 ++++IA+ V+ V+ML+ A+ + LY LGIFIPLIV NCIV+GRAEAFA K P L +L Sbjct: 71 ACFIVVIATFVTLVEMLMQAFTYPLYGMLGIFIPLIVVNCIVLGRAEAFAYKN-PILPSL 129 Query: 130 -DGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAML 188 DG IG+G T A+ LG++RE+IG G G +L + + +PF + Sbjct: 130 ADGLGIGLGFTMALGALGAVREVIGTGCF----TVPFGPTLTILSADWY---TPFSFMVQ 182 Query: 189 PPGAFIGLGLMLAGKYLIDER 209 PGAFIGLGLML L+ + Sbjct: 183 APGAFIGLGLMLCLMNLVPSK 203 >UniRef50_A1WT45 Electron transport complex, RnfABCDGE type, E subunit n=4 Tax=Bacteria RepID=A1WT45_HALHL Length = 219 Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 86/215 (40%), Positives = 131/215 (60%), Gaps = 19/215 (8%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 D + G+W+ N V LLG+CP+LAVT+T NAL +GLATT VL + +S LR + P Sbjct: 13 DTFLSGVWRENPVFVMLLGMCPVLAVTNTTENALAMGLATTFVLVCSTGLVSVLRDFIPK 72 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 E+RI Y++IIAS V+ V I A + +Y +LG FI LIV NC+++GRAEAFA++K Sbjct: 73 EVRIASYIVIIASFVTVVDYAIQAISLDIYNALGAFIQLIVANCMILGRAEAFASRKPLG 132 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD-SPFL 184 + +D +G G T A+ LG++RE++G G ++L +++F P++ Sbjct: 133 KTLVDALGVGAGFTLALLCLGTVRELLGAG--------------EILGIQVFADRFEPWV 178 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAA 219 + +LPPG F +LAG L+ +K+R+ + AA Sbjct: 179 IMLLPPGGF----FVLAGWLLLFAWIKERQNQRAA 209 >UniRef50_C8WMP6 Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMP6_EGGLE Length = 235 Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 89/222 (40%), Positives = 133/222 (59%), Gaps = 14/222 (6%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 V +GL N L Q+LGLCP LAVT+ TN +G+G+ATT VL + + +S LR+ P Sbjct: 12 SVFSKGLLIENPTLRQMLGLCPTLAVTTAVTNGIGMGVATTFVLVCSGIVVSLLRNIIPT 71 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 +R+P ++ +IA V+ V M++ AY L Q+LGI++PLIV NCIV+GRAE FA+K Sbjct: 72 TMRLPAFITVIAGFVTIVMMVVEAYLPDLNQALGIYLPLIVVNCIVLGRAEVFASKHPVK 131 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLL 185 +ALDG +G G T + ++ ++RE++G GTL G LLG P + Sbjct: 132 DAALDGLGMGAGFTLTLVLMSAIRELLGAGTLL-GFPILLGIV------------EPMTV 178 Query: 186 AMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 ++PPG F LG+++A + + R +KRRA + A+ + E Sbjct: 179 FIMPPGGFAVLGVLIAISVVFEMR-RKRRAGEPEDEAIASQE 219 >UniRef50_B2A682 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A682_NATTJ Length = 206 Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 129/211 (61%), Gaps = 10/211 (4%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + + QGL K N QLLGLCP LAVT TA N+LGLG AT VL N+ IS +++ Sbjct: 2 KFSEAFTQGLLKENGLYRQLLGLCPALAVTQTAMNSLGLGAATMAVLLAANIVISLVKNL 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P +IRIP Y++IIA+ V+ V M + A+ L+ +LGIFIPLIVTNC+++GRAEAFA+K+ Sbjct: 62 IPKKIRIPSYIVIIATFVTIVDMFLEAFTPDLHAALGIFIPLIVTNCLILGRAEAFASKE 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGA--DALLGSWAKVLRVEIFHTD 180 + D +G+G T + LG +RE+ G G+LF L G++ + Sbjct: 122 KVTSAIGDALGMGIGFTLGLLSLGVVRELFGKGSLFGWPVLHELFGAFGLEFQ------- 174 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMK 211 P L+ + P GAF LG++LA ++ +R++ Sbjct: 175 -PALIFIQPAGAFFALGILLALMNIVYKRLQ 204 >UniRef50_A9KRX0 Electron transport complex, RnfABCDGE type, E subunit n=102 Tax=Bacteria RepID=A9KRX0_CLOPH Length = 253 Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 87/215 (40%), Positives = 131/215 (60%), Gaps = 17/215 (7%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MS+ + I G+ K N V +LG+CP LAVT++A N +G+GL TT VL ++N+ IS LR Sbjct: 1 MSKALERIYNGVIKENPTFVLMLGMCPTLAVTTSAINGVGMGLTTTAVLIMSNMLISMLR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 P ++R+P +++++AS V+ VQ+L+ AY L SLGI+IPLIV NCI++GRAEA+A+ Sbjct: 61 KAIPDKVRMPAFIVVVASFVTIVQLLLQAYLPSLNDSLGIYIPLIVVNCIILGRAEAYAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K S DG +G+G T + ++G REI+G GT F G + S+ Sbjct: 121 KYPVYPSIFDGVGMGLGFTVGLTLIGLFREILGAGTAF-GFSIMPDSY------------ 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRA 215 PF + +L PGAF L ++ A + ++K + A Sbjct: 168 EPFSIFVLAPGAFFVLAMLTA----LQNKLKLKSA 198 >UniRef50_C7RDT4 Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDT4_ANAPD Length = 215 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 82/206 (39%), Positives = 126/206 (61%), Gaps = 14/206 (6%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 V ++G++ NN VQ +G+C +LA++S+ NA+G+G++ V+ ++NL IS LR++ Sbjct: 24 KVFIEGIFANNPVFVQTVGMCSVLAISSSLINAIGMGVSVIFVVVMSNLVISLLRNFISD 83 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 EIRIP +++IIA V+ VQM I AY L +SLGIFIPLIV NC+++ RAE FA+ GP Sbjct: 84 EIRIPAFIVIIAGFVTMVQMAIKAYLPALDESLGIFIPLIVVNCLILARAEGFASSHGPV 143 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLL 185 S +DG G+G T A+ +L RE++G GTLF GA + ++ + Sbjct: 144 ASIVDGLGQGLGYTFAISLLAFFRELLGAGTLF-GAQIIPEAYTIGFLQQ---------- 192 Query: 186 AMLPPGAFIGLGLMLAGKYLIDERMK 211 P +FI LG+++A I ++ K Sbjct: 193 ---PASSFIVLGMLVAAFNAISKKRK 215 >UniRef50_C7GZP2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZP2_9FIRM Length = 272 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 85/201 (42%), Positives = 127/201 (63%), Gaps = 14/201 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MS+++ + +G+ K N LV LLG CP LA T++A N +G+G++T +VLT +N+ IS L+ Sbjct: 1 MSKLQ-IFTKGIIKENPVLVLLLGTCPTLATTTSAINGVGMGVSTLVVLTCSNIAISALK 59 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 P ++RIP Y+++IA V+ VQ+L+ Y L ++LG+FIPLIV NCI++GRAE FA+ Sbjct: 60 KVIPDKVRIPCYIVVIAGFVTIVQLLLKGYVPTLDKALGLFIPLIVVNCIILGRAEMFAS 119 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K S LDG +G+G T A+ +G +REI+GNGT F AL S+ Sbjct: 120 KNSLLDSILDGLGMGVGFTLALGCMGLIREIVGNGTAF--GFALTKSFL----------- 166 Query: 181 SPFLLAMLPPGAFIGLGLMLA 201 +P L M+ PG F +++A Sbjct: 167 TPMSLFMMAPGGFFVFAILIA 187 >UniRef50_C0R023 SoxR-reducing system protein RsxE n=2 Tax=Brachyspira RepID=C0R023_BRAHW Length = 219 Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 129/213 (60%), Gaps = 5/213 (2%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 V ++G+WKNN VQ+LG+CP LAVTS+ NA+G+ +AT VL ++ IS ++ Sbjct: 4 SQVFMEGVWKNNPTFVQVLGMCPSLAVTSSVMNAIGMSVATIFVLVCSSALISLIKKIYA 63 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 E+RI Y+++IA+ V+ +++ A + L +LG +IPLIV NCI++GRAEAFA K G Sbjct: 64 NEVRIMGYIVVIAAFVTLTDIVMKAKFYTLSLALGPYIPLIVVNCIILGRAEAFANKNGI 123 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTL--FDGADALLGSWAKVLRVEIFHTD-- 180 S D G+G A+ +L S+RE++GNGT FD L G + + + + Sbjct: 124 IPSIFDALGNGVGFFIALTLLASIREVLGNGTWLGFDIVGTLRGFFESAMPFALNAYNEI 183 Query: 181 -SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKK 212 +P+++ ++ PGAF LG ++A K ID R K Sbjct: 184 TTPWVVMIMAPGAFFTLGTLIAIKRAIDARGGK 216 >UniRef50_Q1PW71 Strongly similar to Na(+)-translocating NADH:quinone reductase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW71_9BACT Length = 210 Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 82/213 (38%), Positives = 131/213 (61%), Gaps = 16/213 (7%) Query: 10 QGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRI 69 +GL+K N+ V +LG+CP LAVT++ N + +G A T VL +N IS +R + P EIRI Sbjct: 11 KGLFKYNALFVLVLGICPSLAVTTSLKNGVSMGGAATFVLVSSNFIISLIRPYVPREIRI 70 Query: 70 PIYVMIIASVVSAVQMLINAY-AFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSA 128 P ++++IAS V+ V++++ AY + SLGIFIPLIV NCI++ RAEAFA K P +S Sbjct: 71 PCFIVVIASFVTIVELMMKAYLPTEINASLGIFIPLIVVNCIILYRAEAFAYKNKPFVSI 130 Query: 129 LDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAML 188 LDG IG+G T ++ ++ +RE++G GTLF +++ P + ++ Sbjct: 131 LDGLGIGLGWTLSLCLVSGVREMLGAGTLFG--------------LKLSERYEPASIMIM 176 Query: 189 PPGAFIGLGLMLAGKYLIDERMKKRRAEAAAER 221 PGAFI GL++ G + +++K ++ ++ Sbjct: 177 APGAFIITGLLM-GLFNWRKQLKSEKSMKVYQK 208 >UniRef50_Q73PG4 Na(+)-translocating NADH-quinone reductase, D subunit n=1 Tax=Treponema denticola RepID=Q73PG4_TREDE Length = 219 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 83/226 (36%), Positives = 129/226 (57%), Gaps = 19/226 (8%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 + G+ +NN LV ++GLC LAVT+ N LG+GLA T V+ ++ L IS R P Sbjct: 5 SIFTNGIIRNNPLLVLMIGLCSSLAVTTNILNGLGMGLAMTFVIVMSELIISIFRKLIPQ 64 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 +IRIP+++++IAS + V +L+ AY L ++G+FI LIV NCI++GR E+FA+K+ P Sbjct: 65 DIRIPVFIIVIASFTTIVDLLMQAYTPALADAMGLFIKLIVVNCIIMGRVESFASKESPG 124 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLL 185 S LD +G+G T + ++ ++REI+G+G+L V E +H F Sbjct: 125 KSVLDALGMGVGYTIVLVLISAIREILGSGSL----------AGNVFIPEAYHIRF-FAN 173 Query: 186 AMLPPGAFIGLGLMLA----GKYLIDERMKKRRAEAAAERALPNGE 227 A PG F G+M++ K L+ ER KK+ + A + P + Sbjct: 174 A---PGGFFVFGIMISINLFAKKLL-ERPKKKIQSSPAPQTEPEAK 215 >UniRef50_D1VUK9 Electron transport complex protein RnfE n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUK9_9FIRM Length = 199 Score = 143 bits (360), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 81/214 (37%), Positives = 129/214 (60%), Gaps = 16/214 (7%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ V + KNN +QL+GLC +LA+T+ N++ +G+A T VL ++N +S LR+ Sbjct: 2 KLSKVFTDAMLKNNPTFMQLIGLCSVLAITNNVINSVSMGIAVTFVLIMSNGVVSALRNV 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P +IRIP ++++IA+ V+ VQM++ AYA +Y +LGIF+PLIV NC ++G AE FA K Sbjct: 62 IPDKIRIPCFIVVIATFVTLVQMILQAYATPIYLALGIFLPLIVVNCCILGEAEGFAYKN 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 S +DG G+G T A+ ++G +RE G G+L + +++ EI+ Sbjct: 122 KLIPSLVDGLGTGVGYTLAVLIMGVVREFFGYGSLLN---------IQIIPKEIYPGIG- 171 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAE 216 +LA P GAFI LG ++A + + RRA+ Sbjct: 172 -ILAA-PAGAFILLGFVIAAF----KNLLTRRAD 199 >UniRef50_Q12W80 Electron transport complex protein rnfE n=2 Tax=Methanosarcinaceae RepID=Q12W80_METBU Length = 203 Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 78/208 (37%), Positives = 129/208 (62%), Gaps = 14/208 (6%) Query: 9 VQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIR 68 ++G+ K+N +LGLCP LAVT++ NA+G+ T VL +NL +S LR PA +R Sbjct: 8 IRGITKDNPIFGLVLGLCPTLAVTTSIDNAIGMSAGTAFVLICSNLMVSGLRKQIPASVR 67 Query: 69 IPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSA 128 +PI+++IIA+ VS V+M++ AY +Y +LG+FIPLIV NCI++GRAEA+A K S Sbjct: 68 LPIFILIIATFVSIVKMVMEAYFPPMYAALGVFIPLIVVNCIIIGRAEAYANKNNMFYSL 127 Query: 129 LDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAML 188 +D G + ++G +RE++G G + A+ G+ +++ + I +P +L Sbjct: 128 IDALGSSAGFLLVLVLIGGIRELLGTGGI-----AIFGT--QLVSIPI----NPITFMIL 176 Query: 189 PPGAFIGLGLMLAGKYLIDERMKKRRAE 216 PGAF+ +G+++A +++ R K+ A Sbjct: 177 SPGAFLTIGILMA---IVNHRRAKKLAR 201 >UniRef50_D1PN89 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit n=8 Tax=Bacteria RepID=D1PN89_9FIRM Length = 230 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 123/207 (59%), Gaps = 13/207 (6%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 V G+ + N L +LG C LAVT+T + A+G+GL+ T VL +N+ IS LR P Sbjct: 9 KVFTAGIIRENPVLRLVLGCCSALAVTTTVSGAVGMGLSMTFVLVCSNIVISALRKVIPG 68 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 ++ +P Y++IIA+ V+ VQM++ A+ LY+SLG+F+ LIV NCI++GRAE FA K Sbjct: 69 KVHLPCYIVIIATFVTVVQMVLQAFVPDLYKSLGVFLALIVVNCIILGRAEMFACKNTVV 128 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLL 185 SALDG +G+G M ++ S+REIIG+G+ G + S V R+ I ++ Sbjct: 129 DSALDGLGMGIGYILTMTLMSSIREIIGSGSWL-GITIIPES---VDRMTIMNS------ 178 Query: 186 AMLPPGAFIGLGLMLAGKYLIDERMKK 212 PG F G ++AG ++ ++ K Sbjct: 179 ---APGGFFVFGCLMAGCVWLERKLNK 202 >UniRef50_B7UZU0 Na(+)-translocating NADH-quinone reductase subunit D n=228 Tax=Bacteria RepID=NQRD_PSEA8 Length = 224 Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 84/226 (37%), Positives = 125/226 (55%), Gaps = 20/226 (8%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 I++V+ +++NN +Q+LG+C LAVTS A + +A TLV +NL IS +R Sbjct: 8 IREVLFNPVFQNNPIGLQILGICSALAVTSNLKTATVMAIALTLVTGFSNLFISMIRRQI 67 Query: 64 PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKG 123 P+ IR+ + ++IIAS+V V ++ AYA+ L + L +F+ LI+TNCIV+GRAEAFA Sbjct: 68 PSSIRMIVQMVIIASLVIVVDQVLKAYAYSLSKQLSVFVGLIITNCIVMGRAEAFAMANP 127 Query: 124 PALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALL----GSWAKVLRVEIFHT 179 P +S DG G+G + + VLG +RE+ G G L+ G L G W + Sbjct: 128 PLVSFFDGIGNGLGYSAMLLVLGFVRELFGAGKLY-GISVLPTVNDGGWYQ--------- 177 Query: 180 DSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPN 225 P L +LPP AF +GL++ KK + EA + P Sbjct: 178 --PNGLLLLPPSAFFLIGLIIWAL----RTWKKDQVEAPTYKMAPQ 217 >UniRef50_A5N7M8 RnfE n=5 Tax=Clostridiales RepID=A5N7M8_CLOK5 Length = 213 Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 76/227 (33%), Positives = 129/227 (56%), Gaps = 15/227 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M + ++ +GL N LV L LCP LA TS+A N L +GL V+T N +S ++ Sbjct: 1 MKGLWNIFKKGLVSENPILVLALSLCPALATTSSAVNGLTMGLCVLFVITCNNTVVSIIK 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + ++R+P+Y+ IA++V+ V++++ AYA LY LGI++ L+V I++ RAE FA+ Sbjct: 61 KFVNPKVRVPVYITCIATIVTVVELVLEAYAPELYSQLGIYLALVVVFAIILARAETFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K S DG +G G T A+ ++ +RE+ G GT+F G + S+ Sbjct: 121 KNPVIPSFFDGLGMGCGFTLALVLISIIRELFGAGTVF-GIHVMWASY------------ 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 +P L+ +LPPGAFI +G +++ + ++ ++K + + + L GE Sbjct: 168 NPALIMILPPGAFILIGYLVSLVKVYNQHVEKVKMKKLEQ--LSGGE 212 >UniRef50_C8PN80 Na(+)-translocating NADH-quinone reductase subunit d (Na(+)-translocating nqr subunit d) n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PN80_9SPIO Length = 272 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 126/214 (58%), Gaps = 14/214 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M E + GL K N ++ ++GLC LA+T++ N +G+GLA T V+ L+ + IS R Sbjct: 1 MKEYVRIFTNGLVKENPLIMLMIGLCSALAITTSVANGIGMGLAMTFVIVLSEMIISMFR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P +IRIPI++++IAS + V +L+ A+ L +S+GIFI LIV NCI++GR E+FA+ Sbjct: 61 KFIPNDIRIPIFIIVIASFTTIVDLLMQAFLPELSESMGIFIKLIVVNCIIMGRVESFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K+ P + D +G+G T + V+ ++RE++G+GT VL V + D Sbjct: 121 KESPIKAMADALGMGLGFTWVLVVMSAIRELLGSGT--------------VLGVRLLPDD 166 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRR 214 PG F GL++A YLI ++ K+R+ Sbjct: 167 YLIKFFANSPGGFFVFGLLIALTYLIQDQRKQRK 200 >UniRef50_D2MN20 Rnf-Nqr subunit, membrane protein (Fragment) n=4 Tax=Erysipelotrichaceae RepID=D2MN20_9FIRM Length = 216 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 92/135 (68%) Query: 23 LGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSA 82 LGLC LA++++ NALG+G+ VL L+N+ +S +RH TP +I IP+Y+ IIA++V+ Sbjct: 24 LGLCSTLAISTSLNNALGMGIGVIFVLVLSNMLVSMVRHITPDDIHIPVYITIIATLVTV 83 Query: 83 VQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAM 142 + ML++A+ L+ +LG F+ LI NCI++GRAEAFA K S DGF +G+ T A+ Sbjct: 84 LSMLMHAFTPTLFTALGAFLDLITVNCIILGRAEAFACKNNVVDSVKDGFQMGLAYTGAL 143 Query: 143 FVLGSLREIIGNGTL 157 + +R+I+G G L Sbjct: 144 LCMAVIRQIVGTGIL 158 >UniRef50_A4SQL7 Na(+)-translocating NADH-quinone reductase subunit D n=132 Tax=Bacteria RepID=NQRD_AERS4 Length = 210 Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 80/217 (36%), Positives = 121/217 (55%), Gaps = 16/217 (7%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 SE+K +++ + NN +Q+LG+C LAVTS A + LA T V +NL IS +R+ Sbjct: 5 SEMKKLLLTPVLGNNPIALQVLGVCSALAVTSQMKTAFVMTLAVTAVTAFSNLFISLIRN 64 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 P +RI + +IAS+V V ++ AYA+ + + L +F+ LI+TNCIV+GRAEA+A K Sbjct: 65 QIPNSVRIIAQMAVIASLVIVVDQVLKAYAYEISKQLSVFVGLIITNCIVMGRAEAYAMK 124 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALL----GSWAKVLRVEIF 177 P S LDG G+G + + ++REI+G+GT F G + L G W Sbjct: 125 SAPLPSFLDGIGNGLGYGAVLLTVATVREILGSGTWF-GIELLPLVNNGGWY-------- 175 Query: 178 HTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRR 214 P L +LPP AF +GL++ G D + + + Sbjct: 176 ---VPNGLLLLPPSAFFIIGLIIWGVRTRDPKQVEAK 209 >UniRef50_Q7VNU6 Na(+)-translocating NADH-quinone reductase subunit D n=16 Tax=Bacteria RepID=NQRD_HAEDU Length = 207 Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 116/203 (57%), Gaps = 16/203 (7%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + +K +++ + NN +Q+LG+C LAVT+ A + +A +LV +++ IS +R+ Sbjct: 4 NNLKKLLLSPISDNNPIALQILGICSALAVTTQLQTAFVMAIAVSLVTAFSSMFISMIRN 63 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 + P IRI + + IIAS+V V ++ AY + L + L +F+ LI+TNCIV+GRAEAFA K Sbjct: 64 YIPNSIRIIVQMAIIASLVILVDQILRAYVYDLSKQLSVFVGLIITNCIVMGRAEAFAMK 123 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALL----GSWAKVLRVEIF 177 P S +DG G+G + ++ LRE+IG+G +F G L G W + Sbjct: 124 SAPLESFVDGIGNGLGYGAMLVIVAFLRELIGSGKIF-GVTVLQTIQDGGW--------Y 174 Query: 178 HTDSPFLLAMLPPGAFIGLGLML 200 + FLLA P AF +G ++ Sbjct: 175 QANGLFLLA---PSAFFIIGFVI 194 >UniRef50_A6TT08 RnfA-Nqr electron transport subunit n=8 Tax=Bacteria RepID=A6TT08_ALKMQ Length = 209 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 64/199 (32%), Positives = 115/199 (57%), Gaps = 13/199 (6%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + K + G+ +N Q+LG+C LAVT+ N+L +G+ V L++ T+S LR Sbjct: 3 KKTKRIFQLGILNDNPVFRQILGICSALAVTNLMINSLVMGIGLIFVTALSSFTVSVLRK 62 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 TP IR+ + +II++ V V +++ AY + +LG ++ LI+TNCI++GR E++A Sbjct: 63 HTPRHIRMMVQTLIISAYVIIVDIVLKAYYPSMSDALGPYVGLIITNCIIMGRCESYAQN 122 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 P+L+ LDG + G+G T + ++ RE++G G++F ++G+W Sbjct: 123 NPPSLAFLDGIASGLGYTFVLLLIAFFRELLGFGSIF--GITVMGAWWP----------- 169 Query: 182 PFLLAMLPPGAFIGLGLML 200 ++ ++PPGAF LG+++ Sbjct: 170 RWIFMIMPPGAFFMLGILI 188 >UniRef50_A8ZSV5 RnfA-Nqr electron transport subunit n=2 Tax=Desulfobacteraceae RepID=A8ZSV5_DESOH Length = 207 Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 14/207 (6%) Query: 9 VQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIR 68 +QG+ N QLLGLCP+LAVT +A+ + A VL N+ IS +R+ +R Sbjct: 12 LQGIIPENPVYRQLLGLCPVLAVTGNMQSAMTMAGAVLFVLFCANVMISLIRNILKPHLR 71 Query: 69 IPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSA 128 I I+ + IA+ V+ V + AY + + ++LG +IPLI+ NCI++ R E A+K+ + Sbjct: 72 IVIFTLTIATFVTIVDRFLAAYMYNMSKALGPYIPLIIVNCIIICRCEVCASKQSVFHAG 131 Query: 129 LDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAML 188 D +G A+ + ++REI+G G F G L W +++ L Sbjct: 132 ADAIGQSLGFALALASIATVREILGTGMFF-GLPVLPDVWPD------------WVIMAL 178 Query: 189 PPGAFIGLGLMLA-GKYLIDERMKKRR 214 PPGAF GL+L + R KK + Sbjct: 179 PPGAFFTFGLLLGLVNWFTANRAKKEK 205 >UniRef50_C1DEF3 Electron transport complex protein rnfA n=60 Tax=Bacteria RepID=RNFA_AZOVD Length = 194 Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 7/157 (4%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E+ ++V + NN LVQ LGLCP + V+ A+GL LATT VLTL + L+ Sbjct: 1 MTELVLILVGAILVNNFVLVQFLGLCPFMGVSKRIETAIGLALATTFVLTLAAMCSYLLQ 60 Query: 61 HW--TPAE---IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + P + +R ++++IA VV +ML+N + LY+ LGIF+PLI TNCIV+G A Sbjct: 61 RYVLVPLDLEYLRTIGFILVIAVVVQFTEMLVNKTSPLLYRVLGIFLPLITTNCIVLGVA 120 Query: 116 EAFAAKKGPAL--SALDGFSIGMGATCAMFVLGSLRE 150 A K G S ++GF G+G + + + ++RE Sbjct: 121 LLNANKAGYGFLESGINGFGAGLGFSLVLVLFAAMRE 157 >UniRef50_Q2LXT9 Sodium-translocating NADH-quinone reductase subunit D n=3 Tax=Deltaproteobacteria RepID=Q2LXT9_SYNAS Length = 214 Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 18/213 (8%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 +++ G+ N L +CP + +T++ N L LG A V ++ TI+ ++++ Sbjct: 17 ELLFNGILLENPIFRLALSMCPAVGLTTSIKNGLLLGTAVLFVQVFSSCTIAAIKNFIHP 76 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 IRIP Y + IA+ V+ + +++ AY Y+ +G+F+ LIV I+ R E FA K Sbjct: 77 RIRIPTYTLTIATWVTVIDLVLAAYVPEAYKQVGLFVKLIVAFAIITMRLEMFACKNTVT 136 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLL 185 S DG +G+G M +G +RE++G GTL G D L P L Sbjct: 137 SSFFDGVGMGIGFMVGMVTIGFVRELLGAGTLL-GYDVL--------------GFKPLLF 181 Query: 186 AMLPPGAFIGLGLMLAGKYLID---ERMKKRRA 215 +LP F +G+M+A I+ R K+R++ Sbjct: 182 FVLPAAGFFCVGIMMAMFNYIEVVFNRSKERKS 214 >UniRef50_A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase subunit D n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU8_ACHLI Length = 219 Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 54/162 (33%), Positives = 97/162 (59%) Query: 7 VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAE 66 ++ G+ + N +V +LG+C LAVT+ NA+ +G+ T V+ +++ +S +R+ P++ Sbjct: 25 ILKNGISEENPIIVSVLGICSALAVTNRVENAIVMGIGVTFVIMASSMMVSMMRNLIPSK 84 Query: 67 IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPAL 126 +R+ +++II+ VQM + A+ + +LG + LI+TNCIV+GRAEAFA K Sbjct: 85 VRMVAFMVIISMFTIVVQMFLQAFLPVVAANLGAYTGLIITNCIVMGRAEAFAIKNPVKY 144 Query: 127 SALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSW 168 + +DGF+ GMG T + + ++RE + GT + +W Sbjct: 145 TIIDGFANGMGYTLVLIAIAAVREPLAFGTFLGMSIPGFDNW 186 >UniRef50_B7UWJ4 Electron transport complex protein rnfA n=85 Tax=Bacteria RepID=RNFA_PSEA8 Length = 194 Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 91/159 (57%), Gaps = 7/159 (4%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E+ ++V + NN LVQ LGLCP + V+ A+GL LATT VLTL + L+ Sbjct: 1 MTELALILVSAILVNNFVLVQFLGLCPFMGVSRKIETAIGLSLATTFVLTLAAMCSHILQ 60 Query: 61 HWT--PAE---IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + P + +R ++++IA VV +ML+ + LY+ LGIF+PLI TNCIV+G A Sbjct: 61 RYVLRPLDLEYLRTIGFILVIAVVVQFTEMLVKKTSPLLYRVLGIFLPLITTNCIVLGVA 120 Query: 116 --EAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREII 152 A A+ G + GF G+G + + + +LRE I Sbjct: 121 LLNANKAEYGFLQATTQGFGAGLGFSLVLVLFAALRERI 159 >UniRef50_Q3KM82 Na(+)-translocating NADH-quinone reductase subunit D n=15 Tax=Chlamydiales RepID=NQRD_CHLTA Length = 213 Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 70/206 (33%), Positives = 109/206 (52%), Gaps = 7/206 (3%) Query: 10 QGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRI 69 LW NN L+ +LG+C LAVT+T T AL +G A + V ++ +S LR TP +R+ Sbjct: 13 DALWINNQPLIAILGICSALAVTTTVTTALTMGFAVSFVTGCSSFVVSLLRKITPESVRM 72 Query: 70 PIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSAL 129 ++II+ V + + A+ F + ++L +F+ LI+TNCIV+GRAE+ A P + L Sbjct: 73 IAQLIIISLFVILIDQFLKAFFFTISKTLSVFVGLIITNCIVMGRAESMARHVSPIPAFL 132 Query: 130 DGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD--SPFLLAM 187 DG G+G + + +RE+ G GT+ G + ++L H D L + Sbjct: 133 DGLGSGLGYGWVLVCISIIRELFGFGTIL-GFRVI----PEILYTSAAHPDGYENLGLMV 187 Query: 188 LPPGAFIGLGLMLAGKYLIDERMKKR 213 L P AF LG+M+ +I KR Sbjct: 188 LAPSAFFLLGIMIWIVNIIRAPKTKR 213 >UniRef50_Q2NSZ5 Electron transport complex protein rnfA n=11 Tax=Gammaproteobacteria RepID=RNFA_SODGM Length = 193 Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 80/142 (56%), Gaps = 6/142 (4%) Query: 15 NNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPI--- 71 NN LV+ LGLCP + V+ ALG+G+ATT V+TL ++ + + + IP Sbjct: 15 NNFVLVKFLGLCPFMGVSKKVETALGMGMATTFVMTLASICAWLINDFILLPLNIPYLRT 74 Query: 72 --YVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPAL-SA 128 ++ IIA VV ++++ + LY+ LGIF+PLI TNC V+G A + L SA Sbjct: 75 LAFIFIIAVVVQFTELVVRKTSPALYRLLGIFLPLITTNCAVLGVALLNVNENHNFLQSA 134 Query: 129 LDGFSIGMGATCAMFVLGSLRE 150 L GFS +G + M + ++RE Sbjct: 135 LYGFSAAVGFSLVMVLFAAIRE 156 >UniRef50_B8CY11 Electron transport complex, RnfABCDGE type, A subunit n=17 Tax=Bacteria RepID=B8CY11_HALOH Length = 197 Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 6/155 (3%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + I + + + NN LV+ LG+CP L V+ A +GLATT V+T+T + Sbjct: 6 TRILLIFISTVLVNNFILVRFLGICPFLGVSRHVETAFSMGLATTFVMTMTGAATWLINT 65 Query: 62 WTPAEIRIPI-----YVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAE 116 + +P ++++IAS+V V+M I + LY++LGI++PLI TNC ++G A Sbjct: 66 YILEMFNLPFLQYVSFIIVIASLVQFVEMFIKKTSPVLYKALGIYLPLITTNCAILGLAL 125 Query: 117 AFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLRE 150 + S + G S G+G T A+ ++ LRE Sbjct: 126 LIPLNGYNFIESIVFGLSAGVGFTLAIVLMAGLRE 160 >UniRef50_A7FHZ1 Electron transport complex protein rnfA n=360 Tax=Bacteria RepID=RNFA_YERP3 Length = 193 Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 6/156 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E + V + NN LV+ LGLCP + V+ A+G+GLATT VLTL ++ + Sbjct: 1 MTEYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASVCAWMVN 60 Query: 61 HWT--P---AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + P +R ++++IA VV ++++ + LY+ LGIF+PLI TNC V+G A Sbjct: 61 SFILLPLGLIYLRTLAFILVIAVVVQFTELVVRKTSPTLYRLLGIFLPLITTNCAVLGVA 120 Query: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLRE 150 + + SA+ GFS G + M + ++RE Sbjct: 121 LLNVNQSHNFMQSAVYGFSAAAGFSLVMVLFAAIRE 156 >UniRef50_A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase subunit E n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU9_ACHLI Length = 194 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/153 (31%), Positives = 89/153 (58%), Gaps = 5/153 (3%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLT---NLTISTL 59 E+ ++ + + NN AL+ +LG+C L+AV+++ N++ +G+A V+T+T N I L Sbjct: 2 ELIELFLASILSNNIALIFILGMCSLIAVSTSIKNSVNMGVAVIFVVTITAIINWPIYEL 61 Query: 60 RHWTPAE-IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 T E + + +++++IA+ V ++M + Y +Y+S GIF+PLI NCIV+ + F Sbjct: 62 LKATGTEQLALLVFIIVIAAFVQFLEMFLAKYFPKIYESFGIFLPLITVNCIVLSVSLFF 121 Query: 119 AAKKGPAL-SALDGFSIGMGATCAMFVLGSLRE 150 + L + + F +G T AM +L +R+ Sbjct: 122 QQRNYDFLQTTVFAFGSSVGWTFAMILLAGVRQ 154 >UniRef50_A6L724 Na+-transporting NADH:ubiquinone oxidoreductase, electron transport complex protein rnfA n=18 Tax=Bacteria RepID=A6L724_BACV8 Length = 200 Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 6/150 (4%) Query: 7 VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP-- 64 + + ++ NN L Q LG+CP L V+ A G+G A VLT+ + ++ + Sbjct: 6 IFITAIFVNNIVLSQFLGICPFLGVSKKVETATGMGAAVAFVLTIATIVTYLIQKFVLDA 65 Query: 65 ---AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 ++ ++++IA++V V++++ + LYQ+LG+F+PLI TNC ++G A K Sbjct: 66 FGLEYLQTIAFILVIAALVQMVEIILKKVSPALYQALGVFLPLITTNCCILGVAILVIQK 125 Query: 122 KGPALS-ALDGFSIGMGATCAMFVLGSLRE 150 L+ + FS +G AM + +RE Sbjct: 126 DFDLLTGVVYAFSTALGFALAMVLFAGIRE 155 >UniRef50_A6NPN3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN3_9BACE Length = 240 Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 14/183 (7%) Query: 31 VTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAY 90 ++T LG GLA T VL TNL + LR +RIP Y++ A++++A +++ A Sbjct: 69 CSATLPGGLGTGLAMTAVLVCTNLAGAILRPIASPALRIPCYLIAAAAILTAAGLVLQAC 128 Query: 91 AFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLRE 150 GL +F+ N ++ R AF+ + P +A+DG + G+G T A+ VL +LRE Sbjct: 129 FPGLTGCAPLFLLPAAVNAALLARRGAFSRRFTPGYAAVDGLAAGVGFTIALTVLSALRE 188 Query: 151 IIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERM 210 ++G GTL W L E+ P LLA P G F+ L + A R+ Sbjct: 189 LLGKGTL----------WGAALPGEL----PPVLLAAAPCGGFLLLSCLAALVRWASARL 234 Query: 211 KKR 213 ++R Sbjct: 235 ERR 237 >UniRef50_C5SAZ5 Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Gammaproteobacteria RepID=C5SAZ5_CHRVI Length = 196 Score = 72.8 bits (177), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 7/142 (4%) Query: 15 NNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEI-----RI 69 NN L LG+CP L V+ A +GLAT V+ +++ + +W ++ R+ Sbjct: 17 NNFVLALFLGICPFLGVSGKKETAWNMGLATMFVMLVSSAAAYGI-NWLLTQLGLEFLRL 75 Query: 70 PIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSAL 129 Y+ +IAS V V+M + + L++SLGIF+PLI TNC ++G A +K+ + +L Sbjct: 76 ICYIAVIASAVQLVEMFVKKTSPALFRSLGIFLPLITTNCAILGLALFQTSKEYDFVQSL 135 Query: 130 -DGFSIGMGATCAMFVLGSLRE 150 G+G T A+ ++ LRE Sbjct: 136 VYALGAGVGFTLALMLMAGLRE 157 >UniRef50_A7HKQ4 RnfA-Nqr electron transport subunit n=8 Tax=Bacteria RepID=A7HKQ4_FERNB Length = 197 Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 80/145 (55%), Gaps = 6/145 (4%) Query: 12 LWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEI---- 67 ++ +N L LG+C ++++ ++ GLGLA TLV+T+T + + A + Sbjct: 15 IFTSNILLTNFLGMCSFISISKDIKSSNGLGLAVTLVMTITTAINWIIEKYVIAPLDLGY 74 Query: 68 -RIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPAL 126 R +Y+++IA+VV ++M+I+ + LY LGIF+PLI NC ++G A + L Sbjct: 75 LRYILYIIVIAAVVQVLEMIIDRVSPNLYMVLGIFLPLITVNCAILGVALFMQLRNYTFL 134 Query: 127 -SALDGFSIGMGATCAMFVLGSLRE 150 S G GMG A+ +L ++R+ Sbjct: 135 QSVFFGLGSGMGWWLAIVLLAAIRK 159 >UniRef50_D2MN21 Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Bulleidia extructa W1219 RepID=D2MN21_9FIRM Length = 190 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 38/119 (31%), Positives = 70/119 (58%), Gaps = 5/119 (4%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ +++ GL+ NN L + LG+CP + V++ +ALG+G+A V+ +++ T+ H+ Sbjct: 2 DLFTLLIGGLFINNIILTKFLGMCPFMGVSTKLESALGMGVAVIFVIFGSSVIAWTIYHY 61 Query: 63 TPAEIRIPI-----YVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAE 116 I ++++IA+ V V++ I LY+SLGI++PLI TNC V+ A+ Sbjct: 62 VLVPFHIEYMELITFILLIAAFVQFVELFIKKSTPALYKSLGIYLPLITTNCAVLFVAQ 120 >UniRef50_A8ZY02 Electron transport complex, RnfABCDGE type, A subunit n=3 Tax=Bacteria RepID=A8ZY02_DESOH Length = 191 Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 6/161 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIST-- 58 M+E + + + NN L Q LG CP L + A+G+ +A VL + + Sbjct: 1 MTEYILLAISCILINNILLAQFLGNCPFLGTSKKMETAVGMSMAVVFVLVMAGMITWCVD 60 Query: 59 --LRHWTPAE-IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 L W E +R ++++IAS+V V+M + LY LGIF+PLI TNC V+G Sbjct: 61 VFLLKWLDLEFLRTLAFILVIASLVQFVEMFLKKSIPALYAGLGIFLPLITTNCAVMGAC 120 Query: 116 EAFAAKKGPALSAL-DGFSIGMGATCAMFVLGSLREIIGNG 155 ++ L AL FS +G A+ + +RE I G Sbjct: 121 LINIKEEYNFLQALVASFSYAVGFGLALILFAGVRERINLG 161 >UniRef50_B5YE59 Na(+)-translocating NADH-quinone reductase subunit d n=3 Tax=Bacteria RepID=B5YE59_DICT6 Length = 195 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/143 (28%), Positives = 80/143 (55%), Gaps = 8/143 (5%) Query: 15 NNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW--TPAEI---RI 69 NN ++ L LCP + +++ ++G+G A T V+ + ++ + ++ P + R Sbjct: 18 NNIVFMRFLALCPFVGMSTQIETSIGMGAAVTFVMVMASVVTFFIYYYILVPLNLLFLRT 77 Query: 70 PIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSAL 129 ++++IA +V V+M+I + GLY+++GI++PLI TNC ++G G L Sbjct: 78 IAFILVIAVLVQLVEMVIKRFLSGLYKAMGIYLPLITTNCAILG-VTLLNINYGHNLIEA 136 Query: 130 DGFSIG--MGATCAMFVLGSLRE 150 +S+G +G T A+ +L S+R+ Sbjct: 137 IVYSLGVSLGFTIALILLASIRD 159 >UniRef50_A1WT44 RnfA-Nqr electron transport subunit n=13 Tax=Bacteria RepID=A1WT44_HALHL Length = 193 Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 78/142 (54%), Gaps = 7/142 (4%) Query: 15 NNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIS----TLRHWTPAEIRIP 70 NN L LG+CP+L V+ A +G+A+ V+ + +L L ++ + + Sbjct: 17 NNFVLALFLGICPILGVSGKLGTAFPMGVASAFVMLIASLAAYGINIVLGYFELEFLSLI 76 Query: 71 IYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALD 130 Y+ +IAS V V+M + ++ LY++LGIF+PLI TNC ++G A + + L +L Sbjct: 77 AYIAVIASAVQLVEMFVKKFSPPLYRALGIFLPLITTNCAILGVALFQTSYEYNFLQSLT 136 Query: 131 GFSIGMGA--TCAMFVLGSLRE 150 +S+G GA A+ ++ LRE Sbjct: 137 -YSLGAGAGFILAIVLMAGLRE 157 >UniRef50_C8WMP5 Electron transport complex, RnfABCDGE type, A subunit n=30 Tax=Bacteria RepID=C8WMP5_EGGLE Length = 197 Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 67/117 (57%), Gaps = 4/117 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E ++ + NN LV+ LG+CP L V+ +A G+G A T+V+ L L+ Sbjct: 1 MAEYAAILFSMILVNNYVLVKFLGICPFLGVSKKLDSAAGMGCAVTVVMVLATAVTWPLQ 60 Query: 61 HWTPA----EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVG 113 A ++ ++++IA +V ++++I + L+++LG+++PLI TNC V+G Sbjct: 61 QLLNALGLGYLQTIAFILVIAVLVQMLEIVIRYFLPALHEALGVYLPLITTNCAVLG 117 >UniRef50_C8R0U7 NADH:ubiquinone oxidoreductase, subunit E n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0U7_9DELT Length = 203 Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 18/162 (11%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLT----NLTISTLRH 61 ++ L+ N L LG+C LA++ A GLGLA ++ +T NL + + Sbjct: 7 EIFFTALFVENLVLTFFLGMCTFLAISRQVKTAFGLGLAVVIIQAITVPLNNLIYNLVLQ 66 Query: 62 -----WTP-AEIRIP-----IYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCI 110 W A+I + +Y+ +IA+ V ++M ++ Y LY +LGIF+PL+ NC Sbjct: 67 PGALGWLGLADIDLTFLGLLVYIGVIAATVQILEMFLDRYVPALYNTLGIFLPLLTVNCA 126 Query: 111 VVGRAEAFAAKKGPAL--SALDGFSIGMGATCAMFVLGSLRE 150 ++G A F ++ AL S G G G A+ +L +RE Sbjct: 127 ILG-ASLFMVERDYALGESVAYGLGAGGGFLIAVVLLAGIRE 167 >UniRef50_A6LW81 RnfA-Nqr electron transport subunit n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW81_CLOB8 Length = 191 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 8/157 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M E + + L NN L + +GLC V+ + ++G+G+A T V+TL+++ + Sbjct: 1 MREYFTLFIGALLVNNFVLTKFVGLCIFFGVSKSLDASIGMGMAVTSVITLSSMLAWVVY 60 Query: 61 HWT--PAEIRI---PIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 ++ P + ++V++IAS V ++++I A LY GI++ LI TNCIV+ Sbjct: 61 NFVLLPYHLTFLTTIVFVILIASFVQLLELIIKKQAPTLYSMWGIYLLLIATNCIVL-SV 119 Query: 116 EAFAAKKGPALSALDGFSI--GMGATCAMFVLGSLRE 150 + + + FSI GMG A+ ++ SLRE Sbjct: 120 PLLSVESNYSFVKSVVFSIGSGMGFALALVLMASLRE 156 >UniRef50_Q12W81 Electron transport complex protein rnfA n=2 Tax=Methanosarcinaceae RepID=Q12W81_METBU Length = 196 Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 6/151 (3%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 + + G++ N ++Q LGLC + VT +A G+ A V+TL + ++ Sbjct: 9 QIFMDGVFIKNFLIIQFLGLCSFVGVTKDTKSAAGMSGAVIFVMTLAATVSFLIYNFVLV 68 Query: 66 EIRIPI-----YVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 +++ ++++IA++V V+ ++ LY+SLGI++PLI TNC V+G Sbjct: 69 PLKLEFLDLISFIVVIAALVQLVEFVVRKNVPSLYRSLGIYLPLITTNCAVLGVVLLNVL 128 Query: 121 KKGPAL-SALDGFSIGMGATCAMFVLGSLRE 150 + + S + G S G+G M ++ +RE Sbjct: 129 NEYSFIQSVVFGVSAGIGYALVMLMMSGIRE 159 >UniRef50_D1PJN1 Putative electron transport complex protein RnfE n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN1_9FIRM Length = 405 Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 3/148 (2%) Query: 12 LWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPI 71 +W +N +V LGL P++ AL L +A+ L++T T + + H + R I Sbjct: 206 IWLSNPVMVCGLGLAPVVGAALDGERALILCVASLLLITFTRVLAVAVCHLSGNRFRPII 265 Query: 72 YVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSAL-D 130 Y A + V +L+ + +LGI++P++V +V R E A+ P AL Sbjct: 266 YSYAAALLYIPVYILLYEFFGNSLTALGIYLPILVVEPAIVKRME--FAELEPLRDALRH 323 Query: 131 GFSIGMGATCAMFVLGSLREIIGNGTLF 158 GF+ G+G A+ ++G LRE + +GT+F Sbjct: 324 GFNNGIGMCVALLIVGCLREFLASGTVF 351 >UniRef50_Q3KM81 Na(+)-translocating NADH-quinone reductase subunit E n=40 Tax=Bacteria RepID=NQRE_CHLTA Length = 244 Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 22/164 (13%) Query: 7 VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW---- 62 + +Q + N L LG+C LA +S + A GLG++ LVLT+T +I+ L H+ Sbjct: 14 IFLQATFIQNILLSTFLGMCSYLACSSRLSTANGLGMSVALVLTITG-SINWLVHYFITK 72 Query: 63 -------TPAEIRIPI-------YVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTN 108 +PA I + ++++IA+ +++L+ ++ LY +LGIF+PLI N Sbjct: 73 PGALAWLSPALANIDLSFLELIMFIVVIAAFTQILEVLLERFSRNLYLALGIFLPLIAVN 132 Query: 109 CIVVGRAEAFAAKKGPALSALDGFSIGMGA--TCAMFVLGSLRE 150 C ++G + P L + FS+G G A+ + ++RE Sbjct: 133 CAILGGVLFGITRNYPFLPMVV-FSLGSGCGWWLAIVLFATIRE 175 >UniRef50_D2RN92 Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Acidaminococcus RepID=D2RN92_ACIFE Length = 191 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 36/150 (24%), Positives = 76/150 (50%), Gaps = 6/150 (4%) Query: 7 VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH----- 61 ++ ++ +N L + LG+C L V+ N++G+ A + V+ L+ + H Sbjct: 7 ILFSSIFVSNIILSRFLGMCSFLGVSKNFKNSVGMSAAVSFVMLLSTMLSYACYHLLLVP 66 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 + ++ ++++ IA++V V+M + L++++GI++PLI TNC ++G A Sbjct: 67 YHLEYLKTLVFILAIATLVQLVEMFMKKAMPSLHKAMGIYLPLITTNCAILGIALINVES 126 Query: 122 KGPAL-SALDGFSIGMGATCAMFVLGSLRE 150 L S ++ +G T A+ + +RE Sbjct: 127 NYSFLDSCVNSIGTSIGYTMAILLFSCIRE 156 >UniRef50_A6DRQ4 Na(+)-translocating NADH-quinone reductase subunit E n=3 Tax=Bacteria RepID=A6DRQ4_9BACT Length = 245 Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 22/166 (13%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW--T 63 ++ ++ ++ N LG+C LAV+ ++G+G A V T+T + ++ Sbjct: 3 ELALKAIFIENMIFALFLGMCSYLAVSKKVDTSVGMGCAVWFVTTVTCPASWLVSNYFLK 62 Query: 64 PAE-----------------IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIV 106 P E + Y+ +IA++V ++M I + LY SLG+F+PLI Sbjct: 63 PGEQNLIGQLFNKPDLDLTFLTFVSYIALIAAMVQFLEMFIEKISAKLYGSLGVFLPLIA 122 Query: 107 TNCIVVGRAEAFAAKKGPAL--SALDGFSIGMGATCAMFVLGSLRE 150 NC ++G KG +A+ GFS G G A+ V ++RE Sbjct: 123 VNCAILG-GSLMMNDKGFTFPEAAMFGFSGGFGWLMAIVVFAAIRE 167 >UniRef50_A8ZSV6 RnfA-Nqr electron transport subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSV6_DESOH Length = 255 Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 42/174 (24%) Query: 15 NNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLT----------------NLTIST 58 NN L +G+CP + V+ + A G+G A T V+T+ LT Sbjct: 18 NNFVLYYFVGICPFIGVSRNISMAFGMGCAVTFVITIAAFISWAITTFVLIPGAPLTAFV 77 Query: 59 LRHWTPAE---------IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNC 109 + P E + +Y+ I+S V V+M + + LY+S G+F+PLI TNC Sbjct: 78 AGFFLPGEQAAAVDLTILSYIVYIFAISSSVQFVEMYVRKFFPPLYKSFGVFLPLITTNC 137 Query: 110 IVV-------------GRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLRE 150 ++ AEA+ + L+ G+G T A+ ++ +RE Sbjct: 138 AILFACLTIMSNVAVDNPAEAWDLGRALVLAIFG----GVGFTIAIVIMAGIRE 187 >UniRef50_C0QFQ8 RnfA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFQ8_DESAH Length = 259 Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 50/194 (25%) Query: 1 MSEIKDVIVQGLWK---NNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIS 57 M+ + D+I+ L NN L +G+CP + V+ A G+G A T V+T I+ Sbjct: 1 MNYLVDIILIALSAALINNFVLYYFVGICPFIGVSRRVDMAFGMGCAVTFVIT-----IA 55 Query: 58 TLRHWT-PAEIRIP-----------------------------IYVMIIASVVSAVQMLI 87 WT + IP +Y+ IAS V V+M + Sbjct: 56 AFLSWTITTMVLIPGAPLSSFVAGFFLSKEAASTIDLTVLSYIVYIFSIASSVQFVEMYV 115 Query: 88 NAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK----KGPALSALD-------GFSIGM 136 + LY+S G+F+PLI TNC ++ + + PA A D F G+ Sbjct: 116 RKFFPILYKSFGVFLPLITTNCAILFACLTIMSNVVGVENPA-DAWDLWHSLTLAFFGGV 174 Query: 137 GATCAMFVLGSLRE 150 G T A+ ++ +RE Sbjct: 175 GFTIAIVIMSGIRE 188 >UniRef50_UPI0000397FA3 COG4657: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA n=1 Tax=Actinobacillus pleuropneumoniae serovar 1 str. 4074 RepID=UPI0000397FA3 Length = 181 Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 31/83 (37%), Positives = 55/83 (66%), Gaps = 5/83 (6%) Query: 38 ALGLGLATTLVLTLTNLTISTLRHWT--PAE---IRIPIYVMIIASVVSAVQMLINAYAF 92 A+G+G+ATT VLT+ +L+ + + P E +R +++++IA +V +M+++ + Sbjct: 1 AIGMGMATTFVLTVASLSAYLVETYVLIPLEAQFLRTLVFILVIAVIVQLTEMIVHKTSP 60 Query: 93 GLYQSLGIFIPLIVTNCIVVGRA 115 LY+ LGI++PLI TNC V+G A Sbjct: 61 TLYRLLGIYLPLITTNCAVLGVA 83 >UniRef50_Q73PG5 Na(+)-translocating NADH-quinone reductase, E subunit n=1 Tax=Treponema denticola RepID=Q73PG5_TREDE Length = 190 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 4/117 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M E + + + N L++ L LCP + ++S ++G+G A V L + Sbjct: 1 MPETLSIFLSAILVKNVVLMRFLALCPFIGMSSDVKKSVGMGWAVLFVTLLATAVTYPIY 60 Query: 61 HWTP----AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVG 113 ++ ++ I++++IAS+V V+ + A LY S+G+++ LI TNC ++ Sbjct: 61 NYVLIGNLEFLQTLIFILVIASLVQLVEFYLKKAAPALYSSMGVYLALITTNCAILA 117 >UniRef50_B2A6W6 SoxR-reducing system protein RsxE n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W6_NATTJ Length = 86 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 23/38 (60%), Positives = 32/38 (84%) Query: 85 MLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 ML+ AY+ L +S GIF+PLIVTNC+++ R+EAFA+KK Sbjct: 1 MLLEAYSPALQKSRGIFVPLIVTNCLILERSEAFASKK 38 >UniRef50_A4MZD9 Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MZD9_HAEIN Length = 128 Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 5/79 (6%) Query: 15 NNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW-----TPAEIRI 69 NN LV+ LGLCP + V+ A+G+GLAT VLT+ +L + H+ +R Sbjct: 15 NNFVLVKFLGLCPFMGVSKKIETAVGMGLATMFVLTVASLCAYLVDHYILIPLNATFLRT 74 Query: 70 PIYVMIIASVVSAVQMLIN 88 +++++IA VV +M IN Sbjct: 75 LVFILVIAVVVQFTEMAIN 93 >UniRef50_Q487D7 Na(+)-translocating NADH-quinone reductase subunit E n=345 Tax=Bacteria RepID=NQRE_COLP3 Length = 207 Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 23/172 (13%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVT---STATNALGLGLATTLVLTLTNLTI- 56 M + ++ ++ N AL LG+C LAV+ STA + + N I Sbjct: 1 MEHYLSIFIKTIFIENMALSFFLGMCTFLAVSKKVSTAIGLGVAVVVVLGLAVPANQIIY 60 Query: 57 ----------STLRHWTPAE------IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGI 100 S + P E + ++ +IA++V ++ML++ Y LYQ+LGI Sbjct: 61 QAILAPGALDSLMGITDPKESIDLSFLSFITFIGVIAALVQILEMLLDKYFPALYQALGI 120 Query: 101 FIPLIVTNCIVVGRAEAFAAKKGPAL--SALDGFSIGMGATCAMFVLGSLRE 150 F+PLI NC + G A +F K L S + G G+G A+ ++ LRE Sbjct: 121 FLPLITVNCAIFG-AVSFMVAKNLTLGESVVYGVGSGIGWMLAIVLMAGLRE 171 >UniRef50_Q2LXT8 Sodium-translocating NADH-quinone reductase subunit E n=3 Tax=Deltaproteobacteria RepID=Q2LXT8_SYNAS Length = 323 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/154 (19%), Positives = 78/154 (50%), Gaps = 12/154 (7%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTN-----LTISTLR 60 +++ + NN + LGLC + + A+G+G+ T+V+ ++ L L+ Sbjct: 136 SILIGAMLINNYVFTKYLGLCVFIGTSRKKDTAVGMGITFTIVMVVSAMISWFLYQYVLK 195 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + +++ +++ +++ V AV ++ L+++ G+++ L++ NC+++ A+ Sbjct: 196 PYRLDYLQVVVFIGLVSLTVQAVDTVLRKVNPALFKAFGVYLVLVIANCVIIAVPLTLAS 255 Query: 121 KKGPALSALDGFSIGMGA----TCAMFVLGSLRE 150 + +A + F + +GA A+F++ + RE Sbjct: 256 NE---YNAFESFMLALGAGGGFLLALFLMSASRE 286 >UniRef50_Q9ZC45 Na(+)-translocating NADH-quinone reductase subunit E n=23 Tax=Proteobacteria RepID=NQRE_YERPE Length = 199 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 14/157 (8%) Query: 7 VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLT----LTNLTISTLRHW 62 + ++ ++ N AL LG+C LA++ A GLGL T +L L NL + + Sbjct: 8 IFIRAVFVENMALNFFLGMCTFLAISKKVETAFGLGLTVTALLAIATPLNNLIYTYILRE 67 Query: 63 TP-------AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + + ++ ++A++V ++M++ + L+ +LG F+PL+ +C + G A Sbjct: 68 NALIDGVDLSFLDFITFIGVLAALVQILEMVLERFLPSLHHTLGAFLPLLTIHCAIFG-A 126 Query: 116 EAFAAKKGPAL--SALDGFSIGMGATCAMFVLGSLRE 150 F ++ S + G G+G A+ + LRE Sbjct: 127 TIFMVQREYTFTESFVYGTGCGLGWMLAIISMAGLRE 163 >UniRef50_B0MP92 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP92_9FIRM Length = 256 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 22/217 (10%) Query: 8 IVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEI 67 ++ GL K N L+ + P++ +T + + LA ++ LT +T S + + Sbjct: 23 LIDGLAKQNVVLMTGIVNAPVIIAATTFKKGVVIALAFAIISFLTIVTCSFVPKKIVYTL 82 Query: 68 RIPIYVMIIASVVSAVQMLINAYAFGLYQSL-GIFIPLIVTNCIVVGRAEA--FAAKKGP 124 R+ IY ++ SV +L+ F L L GI++PLI+TN ++ + E+ + K Sbjct: 83 RVIIYALV-GSVYYIPTVLLLEQIFPLTVELIGIYMPLIITNALIFSKTESRFYLEDKLK 141 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 + + F G GA C + G RE+I GT + K+ +I +SPF Sbjct: 142 MIIDVIFFIAGFGAVCVL--TGGFRELICFGTF---------AGIKLFDFKIAAFESPF- 189 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAER 221 G FI +G+M + ++ RR +E Sbjct: 190 ------GGFILVGIMAGMFRALYNYLRNRRIRLNSEE 220 >UniRef50_Q1Q255 Similar to Na(+)-translocating NADH-quinone reductasesubunit E n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q255_9BACT Length = 472 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 21/150 (14%) Query: 7 VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTN------------L 54 +++ L+ + L +LLG+CPLL + A +G+A +V+TL+ + Sbjct: 274 ILLNALFFDGIVLSKLLGICPLLNKSRQIDAAWKMGIAVIIVMTLSTALNWVVYNKVLIM 333 Query: 55 TISTLRHWTPAEIRIP------IYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTN 108 L ++ IR+ ++++ IA V + +++ +A Y+ +G F+ LI N Sbjct: 334 GSDVLAKYSSMSIRLEKIFYLTVFIVTIAVFVQTLSVMLRKFARTAYEQMGQFLELITVN 393 Query: 109 CIVVGRAEAFAAKKGPAL--SALDGFSIGM 136 CIV+ A F G + S + F G+ Sbjct: 394 CIVLASA-TFTIPTGTSFMVSTITAFGYGL 422 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 55/219 (25%), Positives = 91/219 (41%), Gaps = 29/219 (13%) Query: 23 LGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP---AEIRIPIYVMIIASV 79 LG C LAVT+ N+L +GL V + I R + +I + ++I++ Sbjct: 28 LGFCSALAVTNKLENSLTMGLGVLFVAMGSFSLIYPFRRLITIAGSHHKISLLMIIVSVF 87 Query: 80 VSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVV-----GRAEAFAAKKGPALSALDGFSI 134 V+ A+ + S+ +I LI TNCIV+ G F + L A Sbjct: 88 VTIFAFFAQAFVPEVAASIRAYIDLITTNCIVLAVISEGLTVPFWEAQKKILKAC----- 142 Query: 135 GMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFI 194 MG A+ +L LRE +G GT+ G + ++ +V +L + P G F Sbjct: 143 -MGYAFALILLAFLREPLGFGTIM-GFSVIPETFPRV------------VLMITPVGGFF 188 Query: 195 GLG--LMLAGKYLIDERMKKRRAEAAAERALPNGETGNV 231 L ++ +L+ R+ + A + A+ E G V Sbjct: 189 ALAGFRLMMRPFLLKARIVYQEAASCECAAVETPEEGPV 227 >UniRef50_A8S6D1 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D1_9FIRM Length = 241 Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 33/202 (16%) Query: 15 NNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIP---- 70 NN ++Q +GL PL+ V +T N L L A TL+L + + L P P Sbjct: 25 NNPVVMQGMGLAPLVVVATTGQNGLMLAAAVTLLLVPSRVLACLLSRLVPLRDEEPTPEQ 84 Query: 71 ----------IYVMIIASVVSAVQMLINAYAFGL-YQSLGIFIPLIVTNCIVVGRAEAFA 119 +Y A V A ++N + FG +LGI++P++V ++ R Sbjct: 85 LQKKLLPRALLYAASAAVVYLAAYPILN-FVFGTGLLNLGIYLPMLVVEPLLTYRFGRVQ 143 Query: 120 AKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHT 179 A+S G I +G + V+G +RE + GT+F A +G WA + Sbjct: 144 ETVHKAVS--KGVRITVGYALLLLVVGVVREWLSLGTVF---GAPVGRWALL-------- 190 Query: 180 DSPFLLAMLPPGAFIGLGLMLA 201 LA +P G FI LG++ A Sbjct: 191 ----PLAKMPAGGFIVLGILCA 208 >UniRef50_Q3K7K5 Putative electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3K7K5_PSEPF Length = 193 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 14/176 (7%) Query: 28 LLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLI 87 L+ T + AL L +V+ + L ++ LR +E +P+ +++ A++ + + Sbjct: 16 LIGATDSVAGALATLLMFAVVVGVYGLCMTPLRSRLSSESLLPVSLILAATLAGCADIFL 75 Query: 88 NAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGS 147 A +Q + ++ LI C+V+ F L F T M VL Sbjct: 76 QRVAMQWHQLISLYAGLIGLQCVVLEHNGFFRRPVRNRLKLCGLF------TALMIVLAV 129 Query: 148 LREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGK 203 LRE+IG G++ L W ++ +F F A L PGAFI LGL+LA + Sbjct: 130 LRELIGQGSI---GHHLSEHWQGLI---LFGDGLHF--ATLAPGAFILLGLLLAAR 177 >UniRef50_C0EE36 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE36_9CLOT Length = 203 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 13/104 (12%) Query: 68 RIPIYVMIIASVVSAVQMLINA------YAFGLYQSLGIFIPLIVTNCIVVGRAEA---- 117 +IP V +I +VV A M I A GL LGIF+PL++TN +V+ ++E Sbjct: 64 KIPYAVRVIFNVVVAALMFIPAALAVDQIQPGLVYKLGIFLPLLITNSLVIQKSETRFRK 123 Query: 118 FAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGA 161 K+G + L G IG + +G+LRE+ G+ TL+ A Sbjct: 124 IPTKRGMIID-LIGHIIGFAIVICL--VGALRELFGSATLWGKA 164 >UniRef50_UPI0001C372EE electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372EE Length = 204 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 62/223 (27%), Positives = 102/223 (45%), Gaps = 27/223 (12%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ K+ + G+ +N L L+ + P++ + NAL L A +T +L I + Sbjct: 1 MNNRKNSVFDGILGDNIILSSLMVISPIIICGDSVKNALSLIYAFN-SMTFISLIIGS-- 57 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLY----QSLGIFIPLIVTNCIVVGRAE 116 + P +I I ++I A + S V + + +A Y +GI+ PL+ N ++V ++E Sbjct: 58 -FVPKKIPYTIRIIIYAIISSLVFIPVRWFAVEFYPDSIHRIGIYYPLLAVNSLIVLQSE 116 Query: 117 A--FAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRV 174 A + KKG + +L + IG M G++RE GT+ +KV Sbjct: 117 AKFYRMKKGRMIISLVFYIIGF--DLVMLFTGAVREFFAYGTIL----------SKV--A 162 Query: 175 EIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEA 217 +I T S L M P G FI LGLM I + +AE+ Sbjct: 163 DINTTVSG--LGM-PFGGFIFLGLMCGVYRKIRSSVHSTKAES 202 >UniRef50_Q4K753 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K753_PSEF5 Length = 187 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 15/182 (8%) Query: 25 LCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIR--IPIYVMIIASVVSA 82 L PL+ T + A+GL LA L++ L + LR P E R +++ AS+ S Sbjct: 2 LPPLIGATDSWVKAIGLALAWVLLIGLYGAGMRLLR--PPIEARHHWLASLLLSASLGSC 59 Query: 83 VQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATC-A 141 + + + A+++ L+Q L +++ L+ C+V+ +A F + L+ GA C A Sbjct: 60 LWLALQAWSYELHQQLSLYLGLLPLQCVVLEQAGFFQHRNRLRLA---------GAFCVA 110 Query: 142 MFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLA 201 + LG+LRE++G GTL L+G + L L PG FI LG +LA Sbjct: 111 LIGLGALRELLGAGTLGSHLGWLVGQ-PDAGSGWVVLPHGGLHLLTLAPGGFILLGALLA 169 Query: 202 GK 203 K Sbjct: 170 AK 171 >UniRef50_A7C280 RnfA-Nqr electron transport subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C280_9GAMM Length = 94 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 S++ + + L NN LGLCP V+ A LGLA+T V+ +T + L Sbjct: 3 SQLLWIFISALLVNNFVFSYFLGLCPFFGVSGKLETAFRLGLASTFVMLITAICTWFLNT 62 Query: 62 WT---PAEIRIPIYVMIIASVVSAVQMLIN 88 + +R+ ++++IAS V V+M+I Sbjct: 63 YILIYAPYLRLISFIVVIASTVQFVEMVIK 92 >UniRef50_A9NEB4 NADH oxidoreductase complex RnfABCDGE type, E subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEB4_ACHLI Length = 192 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 9/145 (6%) Query: 14 KNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYV 73 KNN LL + PL+ + +T AL +GL ++ + + ++ +R Y+ Sbjct: 3 KNNLKPFILLSILPLIYLANTLETALFMGLVYVVLALIIYAGGLLINKFSEGRMRSYAYI 62 Query: 74 MIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALD-GF 132 ++ AS+V+ + ++ Y F L Q +GI++ L + I R E K S +D GF Sbjct: 63 LLTASIVTIIMTVLGTY-FSLNQLMGIYLALTIF-TIPQLRLETVEEK-----SIVDHGF 115 Query: 133 SIGMGATCAMFVLGSLREIIGNGTL 157 I +G A+ ++G LRE +G G++ Sbjct: 116 MILVGF-VALILIGFLREFLGTGSI 139 >UniRef50_UPI0001699AE2 RnfA-Nqr electron transport subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699AE2 Length = 156 Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%) Query: 7 VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH----W 62 + + + NN L LGLCP L V+ AL +GLAT V+ ++++ + + Sbjct: 9 IFLNAVLANNFVLALFLGLCPFLGVSGKLDTALPMGLATMFVMLVSSVCAFAINQILVTF 68 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFG 93 +R+ Y+ +IAS V V+M + + G Sbjct: 69 DIEFLRLIAYIAVIASAVQLVEMTLKKFTPG 99 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B1LEQ4 Electron transport complex protein rnfE n=88 Tax... 266 6e-70 UniRef50_A5F2S7 Electron transport complex protein rnfE n=71 Tax... 238 1e-61 UniRef50_C5BTA2 Electron transport complex, RnfABCDGE type, E su... 230 3e-59 UniRef50_Q9F5Y1 Electron transport complex protein rnfE n=15 Tax... 229 9e-59 UniRef50_Q0VP36 Electron transport complex protein rnfE, putativ... 225 1e-57 UniRef50_Q315L1 Electron transport complex, RnfABCDGE type, E su... 218 1e-55 UniRef50_A1VAS6 Electron transport complex, RnfABCDGE type, E su... 217 2e-55 UniRef50_D0D1S5 SoxR-reducing system protein RsxE n=2 Tax=Proteo... 215 7e-55 UniRef50_C7LXH4 Electron transport complex, RnfABCDGE type, E su... 215 9e-55 UniRef50_C6BZT1 Electron transport complex, RnfABCDGE type, E su... 210 4e-53 UniRef50_C1D6V3 NADH-ubiquinone oxidoreductase n=4 Tax=Betaprote... 206 6e-52 UniRef50_A0L5G3 Electron transport complex, RnfABCDGE type, E su... 206 6e-52 UniRef50_B8D723 Electron transport complex protein rnfE n=5 Tax=... 205 7e-52 UniRef50_D1Y5W2 Na(+)-translocating NADH-quinone reductase subun... 205 1e-51 UniRef50_B8J067 Electron transport complex, RnfABCDGE type, E su... 205 1e-51 UniRef50_C8WMP6 Electron transport complex, RnfABCDGE type, E su... 204 3e-51 UniRef50_Q2W403 Electron transport complex protein rnfE n=3 Tax=... 203 4e-51 UniRef50_A9KRX0 Electron transport complex, RnfABCDGE type, E su... 202 6e-51 UniRef50_A6V1T4 Electron transport complex protein rnfE n=182 Ta... 201 1e-50 UniRef50_D1PN89 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 201 2e-50 UniRef50_D0L1N2 Electron transport complex, RnfABCDGE type, E su... 199 5e-50 UniRef50_Q1PW71 Strongly similar to Na(+)-translocating NADH:qui... 199 5e-50 UniRef50_A7HK22 Electron transport complex, RnfABCDGE type, E su... 199 5e-50 UniRef50_C7GZP2 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 198 1e-49 UniRef50_C5SAZ4 Electron transport complex, RnfABCDGE type, E su... 197 3e-49 UniRef50_D1B8H9 Electron transport complex, RnfABCDGE type, E su... 195 8e-49 UniRef50_C0R023 SoxR-reducing system protein RsxE n=2 Tax=Brachy... 194 1e-48 UniRef50_Q3A7X1 NADH:ubiquinone oxidoreductase, RnfE subunit-lik... 193 3e-48 UniRef50_B8FN67 Electron transport complex, RnfABCDGE type, E su... 192 6e-48 UniRef50_A1WT45 Electron transport complex, RnfABCDGE type, E su... 192 1e-47 UniRef50_A5N7M8 RnfE n=5 Tax=Clostridiales RepID=A5N7M8_CLOK5 192 1e-47 UniRef50_C8PN80 Na(+)-translocating NADH-quinone reductase subun... 191 2e-47 UniRef50_Q73PG4 Na(+)-translocating NADH-quinone reductase, D su... 190 3e-47 UniRef50_C7RDT4 Electron transport complex, RnfABCDGE type, E su... 190 3e-47 UniRef50_B2A682 Electron transport complex, RnfABCDGE type, E su... 186 7e-46 UniRef50_Q5P1B5 NADH:ubiquinone oxidoreductase, subunit RnfE n=3... 184 2e-45 UniRef50_A1F5P3 Electron transport complex protein RnfE n=1 Tax=... 178 8e-44 UniRef50_A4SQL7 Na(+)-translocating NADH-quinone reductase subun... 178 1e-43 UniRef50_B7UZU0 Na(+)-translocating NADH-quinone reductase subun... 178 2e-43 UniRef50_A8ZSV5 RnfA-Nqr electron transport subunit n=2 Tax=Desu... 176 6e-43 UniRef50_A6TT08 RnfA-Nqr electron transport subunit n=8 Tax=Bact... 175 1e-42 UniRef50_D1VUK9 Electron transport complex protein RnfE n=1 Tax=... 174 2e-42 UniRef50_Q12W80 Electron transport complex protein rnfE n=2 Tax=... 174 2e-42 UniRef50_D2MN20 Rnf-Nqr subunit, membrane protein (Fragment) n=4... 170 4e-41 UniRef50_Q7VNU6 Na(+)-translocating NADH-quinone reductase subun... 169 6e-41 UniRef50_A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase ... 165 1e-39 UniRef50_Q2LXT9 Sodium-translocating NADH-quinone reductase subu... 160 4e-38 UniRef50_Q3KM82 Na(+)-translocating NADH-quinone reductase subun... 157 4e-37 UniRef50_D1PJN1 Putative electron transport complex protein RnfE... 136 5e-31 UniRef50_Q2NSZ5 Electron transport complex protein rnfA n=11 Tax... 135 2e-30 UniRef50_A6NPN3 Putative uncharacterized protein n=1 Tax=Bactero... 134 2e-30 UniRef50_C1DEF3 Electron transport complex protein rnfA n=60 Tax... 133 5e-30 UniRef50_B7UWJ4 Electron transport complex protein rnfA n=85 Tax... 132 7e-30 UniRef50_D2RN92 Electron transport complex, RnfABCDGE type, A su... 130 3e-29 UniRef50_A7FHZ1 Electron transport complex protein rnfA n=360 Ta... 130 3e-29 UniRef50_B8CY11 Electron transport complex, RnfABCDGE type, A su... 129 9e-29 UniRef50_A8ZY02 Electron transport complex, RnfABCDGE type, A su... 126 4e-28 UniRef50_C5SAZ5 Electron transport complex, RnfABCDGE type, A su... 125 9e-28 UniRef50_A6L724 Na+-transporting NADH:ubiquinone oxidoreductase,... 124 2e-27 UniRef50_B0MP92 Putative uncharacterized protein n=1 Tax=Eubacte... 124 2e-27 UniRef50_A6DRQ4 Na(+)-translocating NADH-quinone reductase subun... 123 4e-27 UniRef50_C8WMP5 Electron transport complex, RnfABCDGE type, A su... 120 4e-26 UniRef50_D2MN21 Electron transport complex, RnfABCDGE type, A su... 120 5e-26 UniRef50_A7HKQ4 RnfA-Nqr electron transport subunit n=8 Tax=Bact... 120 5e-26 UniRef50_Q2LXT8 Sodium-translocating NADH-quinone reductase subu... 120 6e-26 UniRef50_A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase ... 119 8e-26 UniRef50_Q3KM81 Na(+)-translocating NADH-quinone reductase subun... 118 2e-25 UniRef50_A1WT44 RnfA-Nqr electron transport subunit n=13 Tax=Bac... 117 3e-25 UniRef50_A6LW81 RnfA-Nqr electron transport subunit n=1 Tax=Clos... 116 8e-25 UniRef50_B5YE59 Na(+)-translocating NADH-quinone reductase subun... 116 8e-25 UniRef50_Q73PG5 Na(+)-translocating NADH-quinone reductase, E su... 113 6e-24 UniRef50_Q9ZC45 Na(+)-translocating NADH-quinone reductase subun... 112 7e-24 UniRef50_Q12W81 Electron transport complex protein rnfA n=2 Tax=... 112 8e-24 UniRef50_A8S6D1 Putative uncharacterized protein n=2 Tax=Faecali... 112 8e-24 UniRef50_A8ZSV6 RnfA-Nqr electron transport subunit n=1 Tax=Desu... 111 2e-23 UniRef50_C0QFQ8 RnfA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 111 2e-23 UniRef50_C8R0U7 NADH:ubiquinone oxidoreductase, subunit E n=1 Ta... 109 1e-22 UniRef50_Q487D7 Na(+)-translocating NADH-quinone reductase subun... 108 2e-22 UniRef50_Q3K7K5 Putative electron transport complex, RnfABCDGE t... 97 4e-19 UniRef50_C0EE36 Putative uncharacterized protein n=1 Tax=Clostri... 91 3e-17 UniRef50_Q1Q255 Similar to Na(+)-translocating NADH-quinone redu... 89 1e-16 UniRef50_A4MZD9 Na(+)-translocating NADH-quinone reductase subun... 88 2e-16 UniRef50_UPI0000397FA3 COG4657: Predicted NADH:ubiquinone oxidor... 85 2e-15 UniRef50_B2A6W6 SoxR-reducing system protein RsxE n=1 Tax=Natran... 48 2e-04 Sequences not found previously or not previously below threshold: UniRef50_UPI0001699AE2 RnfA-Nqr electron transport subunit n=1 T... 90 4e-17 UniRef50_UPI0001C372EE electron transport complex, RnfABCDGE typ... 82 2e-14 UniRef50_Q4K753 Putative uncharacterized protein n=1 Tax=Pseudom... 77 5e-13 UniRef50_A7C280 RnfA-Nqr electron transport subunit n=1 Tax=Begg... 75 2e-12 UniRef50_B0P6D1 Putative uncharacterized protein n=1 Tax=Anaerot... 64 4e-09 UniRef50_A9NEB4 NADH oxidoreductase complex RnfABCDGE type, E su... 58 2e-07 UniRef50_B6G8I1 Putative uncharacterized protein n=2 Tax=Collins... 51 4e-05 UniRef50_B0MP91 Putative uncharacterized protein n=1 Tax=Eubacte... 51 4e-05 UniRef50_A6NPN4 Putative uncharacterized protein n=1 Tax=Bactero... 48 2e-04 UniRef50_UPI0001C372EF hypothetical protein RflaF_11025 n=1 Tax=... 46 0.001 UniRef50_Q73MW3 Membrane protein, putative n=1 Tax=Treponema den... 43 0.006 UniRef50_C0EE35 Putative uncharacterized protein n=1 Tax=Clostri... 43 0.010 UniRef50_UPI0001699AC7 Electron transport complex, RnfABCDGE typ... 41 0.045 UniRef50_C8PP66 Putative membrane protein n=1 Tax=Treponema vinc... 40 0.077 UniRef50_C7PPI2 Putative uncharacterized protein n=1 Tax=Chitino... 40 0.084 >UniRef50_B1LEQ4 Electron transport complex protein rnfE n=88 Tax=Proteobacteria RepID=RNFE_ECOSM Length = 231 Score = 266 bits (679), Expect = 6e-70, Method: Composition-based stats. Identities = 229/231 (99%), Positives = 229/231 (99%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR Sbjct: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA Sbjct: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 KKGPALSALDGFSIGMGATCAM VLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD Sbjct: 121 KKGPALSALDGFSIGMGATCAMCVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGNV 231 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRR EAAAERALPNGETGNV Sbjct: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRTEAAAERALPNGETGNV 231 >UniRef50_A5F2S7 Electron transport complex protein rnfE n=71 Tax=Proteobacteria RepID=RNFE_VIBC3 Length = 230 Score = 238 bits (608), Expect = 1e-61, Method: Composition-based stats. Identities = 142/220 (64%), Positives = 182/220 (82%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MSE + +++ G+W NN ALVQLLGLCPLLAV+ST TNALGLG+AT LVL +N+T+S +R Sbjct: 1 MSENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P E+RIP++VMIIAS+V+ VQ+L+NAYA+GLY SLGIFIPLIVTNCI++GRAEAFA+ Sbjct: 61 DYVPKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRAEAFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K +ALDGF +G+G T + VLGSLREIIGNGTLFDGAD LLG WAKVLR+E+FH D Sbjct: 121 KNDVLPAALDGFWMGLGMTSVLVVLGSLREIIGNGTLFDGADLLLGEWAKVLRIEVFHFD 180 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 S FLLA+LPPGAFIG+G ++A K +ID+++ R+ + + Sbjct: 181 SAFLLALLPPGAFIGVGFLIAAKSVIDKQIAARQPKQQKQ 220 >UniRef50_C5BTA2 Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Proteobacteria RepID=C5BTA2_TERTT Length = 253 Score = 230 bits (586), Expect = 3e-59, Method: Composition-based stats. Identities = 105/210 (50%), Positives = 148/210 (70%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 +D G+W+NN ALVQLLGLCP++AVT++ATN LG+G+ATT VL ++++ +S LRH Sbjct: 28 KRYRDYFSFGIWENNIALVQLLGLCPVMAVTTSATNGLGMGIATTAVLIISSVLVSALRH 87 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 PA++R P+ + IIA V+ V + +NA+ LY+ LG+FI LIVTNC ++GR EAFA K Sbjct: 88 TIPAQVRNPVMIAIIAGTVTLVDLAMNAWMHELYKVLGLFIALIVTNCAILGRTEAFAMK 147 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 + P + DG +G+G T A+ +LG REI+G+GTLF A +LLGS + L + DS Sbjct: 148 QPPMAALADGVGMGLGFTWALVLLGGAREILGSGTLFAHASSLLGSHFEWLEITFVEVDS 207 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMK 211 LLA+LPPG FI LG+M+A K ++DER+ Sbjct: 208 GVLLAILPPGGFIVLGIMIALKRVVDERIA 237 >UniRef50_Q9F5Y1 Electron transport complex protein rnfE n=15 Tax=Bacteria RepID=RNFE_AZOVD Length = 238 Score = 229 bits (583), Expect = 9e-59, Method: Composition-based stats. Identities = 106/216 (49%), Positives = 141/216 (65%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 LW+ N ALVQ+L LCP LAVT+TATN LG+GLATTLVL +TN IS++RH Sbjct: 18 WQYFTSALWQYNVALVQMLALCPTLAVTTTATNGLGMGLATTLVLVMTNALISSMRHTIS 77 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 E+R P+ + +IA VV+ M +NA+ LY+ LG+FI LIVTNC V+GRAE+F + Sbjct: 78 PEVRNPVMIGVIAGVVTLTDMAMNAWMHELYKVLGLFIALIVTNCAVLGRAESFCLRNPV 137 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 S LDG +G G T + V+G +REI+G+GTLF A +LLGS K + + + L Sbjct: 138 IPSILDGAGMGAGFTAVLVVIGGIREILGSGTLFSQASSLLGSHFKWMEITVIPDFQGIL 197 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 LA+LPPGAFI LG +LA K +ID + +RR + E Sbjct: 198 LAILPPGAFIVLGFLLAAKRVIDRKRAERRQQTHGE 233 >UniRef50_Q0VP36 Electron transport complex protein rnfE, putative n=10 Tax=Gammaproteobacteria RepID=Q0VP36_ALCBS Length = 238 Score = 225 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 107/225 (47%), Positives = 152/225 (67%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 K + + GLW NN A VQ+LGLCPLLAVT + NA+GLGLAT +VL +N +S +RH+ Sbjct: 6 NYKKISMDGLWNNNPATVQILGLCPLLAVTGSVVNAMGLGLATLVVLMGSNACVSLIRHY 65 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 +R+P +VMIIA++V+ ++ML+ AY F LY+ LGIFIPLIVTNC V+GRA+AFA+K Sbjct: 66 VTDAVRLPAFVMIIAAMVTVIEMLMQAYTFELYEILGIFIPLIVTNCTVLGRADAFASKN 125 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 + +DG +GMG + +LG +RE++G GTLF L G A + + Sbjct: 126 AVLPAMVDGVMMGMGFLVILLILGGMRELVGQGTLFSNMQLLFGPMAAHWELTVIDNYGG 185 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 FLLA+LPPGAF+GLGL++AGK +ID+R+K+ + A++ + Sbjct: 186 FLLAILPPGAFLGLGLIIAGKNVIDKRIKEVQKRKASDEPKTSRR 230 >UniRef50_Q315L1 Electron transport complex, RnfABCDGE type, E subunit n=5 Tax=Bacteria RepID=Q315L1_DESDG Length = 224 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 94/228 (41%), Positives = 132/228 (57%), Gaps = 13/228 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ + +GLW+ +LGLCP+LAVT +A N G+G+A VL L+N+ IS +R Sbjct: 1 MASMWKEFSKGLWREIPPFRLVLGLCPVLAVTKSANNGFGMGMAVIFVLFLSNVIISLVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P ++RI Y+ I AS+V A+++L+ AYA+ LYQ LGIF+PLIV NCI++GRAEAFA Sbjct: 61 NLIPKKVRIACYIAIAASLVVAIELLMQAYAYPLYQQLGIFVPLIVVNCIILGRAEAFAG 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K L+A DG IGMG ++ LGSLRE++G GT+F ++ Sbjct: 121 KNPVHLAAADGLGIGMGFCLSLTFLGSLREMLGTGTVFG-------------HQVMWQGF 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGET 228 P + PGAFI LGL+L L+ KR+ E P E+ Sbjct: 168 KPLTFMVEAPGAFISLGLVLGAMNLLSIVQAKRKGIPEPENPTPGCES 215 >UniRef50_A1VAS6 Electron transport complex, RnfABCDGE type, E subunit n=11 Tax=Bacteria RepID=A1VAS6_DESVV Length = 223 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 97/228 (42%), Positives = 133/228 (58%), Gaps = 13/228 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M +I +GLW+ +LGLCP LAVT TA+N LG+GLA VL L+N+ IS +R Sbjct: 1 MQQIIKEFTKGLWQELPPFRLVLGLCPTLAVTKTASNGLGMGLAVIFVLALSNMIISMVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P ++RI ++ I AS+V AV++L+ AYA+ LYQ LGIF+PLIV NCI++GRAEAFAA Sbjct: 61 NIIPKKVRIACFIAISASLVVAVELLMQAYAYPLYQQLGIFVPLIVVNCIILGRAEAFAA 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K +LS DG IG+G T ++ LG +RE+ G G LF ++ Sbjct: 121 KNPVSLSLADGLGIGLGFTLSLVFLGGIRELFGTGMLFG-------------TQVMWQGY 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGET 228 PF + + PGAFI LGL LA +I+ +R+ A E Sbjct: 168 QPFGIMVEAPGAFICLGLTLAAMNVINTWQARRKGLEAPENPQSGCAA 215 >UniRef50_D0D1S5 SoxR-reducing system protein RsxE n=2 Tax=Proteobacteria RepID=D0D1S5_9RHOB Length = 321 Score = 215 bits (549), Expect = 7e-55, Method: Composition-based stats. Identities = 106/222 (47%), Positives = 141/222 (63%), Gaps = 1/222 (0%) Query: 1 MSE-IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTL 59 MS+ + GLW NN Q+L CPLLAVT TAT LG+GLATT VL + L +S L Sbjct: 1 MSDIYARIARDGLWDNNVVFGQMLAHCPLLAVTGTATKGLGIGLATTAVLVASGLAVSLL 60 Query: 60 RHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFA 119 R IRIP +V++IA +V+ V M +NA++ L+Q LG+FIPLIVTNC ++GRAEA A Sbjct: 61 RGAILPGIRIPAFVLLIACIVNVVDMALNAWSHDLHQVLGLFIPLIVTNCAILGRAEALA 120 Query: 120 AKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHT 179 ++ P SA DG +G+G T A+ VLG+ REI+G+GTLF A LLG L + + Sbjct: 121 SRNRPLASAFDGLMMGLGFTAALVVLGAAREILGSGTLFANASVLLGESVSFLEITVIPD 180 Query: 180 DSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAER 221 FLL +LPPG FI LG +LA K L ++R++ A A + Sbjct: 181 YQGFLLLILPPGVFIVLGALLALKALAEQRVRTEDARRNAPQ 222 >UniRef50_C7LXH4 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Desulfovibrionales RepID=C7LXH4_DESBD Length = 239 Score = 215 bits (548), Expect = 9e-55, Method: Composition-based stats. Identities = 94/227 (41%), Positives = 131/227 (57%), Gaps = 13/227 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ + +GLW +LGLCP+LAVT+TA N LG+G A VL+L+N+ IS +R Sbjct: 1 MASMMKEFTKGLWNELPPFRLVLGLCPVLAVTTTANNGLGMGAAVIFVLSLSNVIISLVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P ++RI ++ I AS+V V+ML+ A+A+ LYQ LGIF+PLIV NCI++GRAEAFAA Sbjct: 61 NIIPKKVRIVCFIAIAASLVVTVEMLMQAFAYPLYQQLGIFVPLIVVNCIILGRAEAFAA 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K P L+ DG +G+G T ++ LGSLREI G+GT F + Sbjct: 121 KNPPLLALADGLGMGIGFTLSLTFLGSLREIFGSGTWFGMS-------------LFGPDF 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 PF + PGAF+ LGL+LAG ++ KR+ Sbjct: 168 HPFTFMVQAPGAFVCLGLILAGMNFLNVWQAKRKGVELDPNFDAGCA 214 >UniRef50_C6BZT1 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Desulfovibrionales RepID=C6BZT1_DESAD Length = 228 Score = 210 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 91/227 (40%), Positives = 136/227 (59%), Gaps = 13/227 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MS + +GLW LLGLCP+LAVTS+A N LG+G+A VLT++NL IS++R Sbjct: 1 MSRLVKEFAKGLWDELPPFRVLLGLCPVLAVTSSAENGLGMGMAVIFVLTMSNLIISSIR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 P ++RI +++I AS+V V++L+ AYA+ LYQ LGIF+PLIV NC+++GRAEAFA+ Sbjct: 61 KIIPTKVRIACFIVITASLVVTVELLMQAYAYPLYQKLGIFVPLIVVNCLILGRAEAFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K G LS D +G+G ++ LG++REIIG GT+F ++ + Sbjct: 121 KNGVILSIADALGMGIGFAVSLTFLGAIREIIGAGTVFG-------------VPVMWESF 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 P ++ PGAF+GLG++LAG + +++ E + Sbjct: 168 KPAEFMIMAPGAFVGLGVILAGMNAFNRYQSRKKGETVPDVMNSGCA 214 >UniRef50_C1D6V3 NADH-ubiquinone oxidoreductase n=4 Tax=Betaproteobacteria RepID=C1D6V3_LARHH Length = 239 Score = 206 bits (524), Expect = 6e-52, Method: Composition-based stats. Identities = 101/212 (47%), Positives = 144/212 (67%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 S K + G+WK N+ +VQLLGLCP+LAV+++ N + LGLAT LV L+ ++ +R Sbjct: 16 SPWKSIAFNGIWKQNAGVVQLLGLCPVLAVSTSIVNGVSLGLATALVTALSGAAVAAVRQ 75 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 W P+EIR PI++ IIA++V+ V + +NA+ GLY LGIFIPLI TNCIV+ RAEAFA+K Sbjct: 76 WVPSEIRNPIFITIIAALVTMVDLAMNAWVHGLYNVLGIFIPLITTNCIVLARAEAFASK 135 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 SA DG +G+G T + +LG++RE+ G GTLF G D + G A L + + + Sbjct: 136 NPVRESAWDGLMMGLGLTGVLGLLGAMRELFGKGTLFSGIDLVFGPAAGALTLHLAPENY 195 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKR 213 FLLA+LPPGAF+GL ++AGK ++ R + + Sbjct: 196 QFLLALLPPGAFLGLACLIAGKNWLESRRRAQ 227 >UniRef50_A0L5G3 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Bacteria RepID=A0L5G3_MAGSM Length = 222 Score = 206 bits (524), Expect = 6e-52, Method: Composition-based stats. Identities = 97/233 (41%), Positives = 146/233 (62%), Gaps = 14/233 (6%) Query: 1 MSEI--KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIST 58 MSEI ++++ G W NN+ QLLG+CPLL VT+TA N +G+GLA+ +VL N+ ++ Sbjct: 1 MSEITNREIVANGFWNNNAVFAQLLGMCPLLGVTTTAMNGIGMGLASLVVLLGANVVVAM 60 Query: 59 LRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 +R + P+E+RIP Y+++IAS V+ V + +NA+ L++ LG+FIPLIV NC ++GRAEAF Sbjct: 61 VRSYIPSEVRIPSYIVVIASFVTIVDLCMNAWLHDLHKILGLFIPLIVVNCAILGRAEAF 120 Query: 119 AAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFH 178 A++ SA+DG + G+G T A+FVLG++REI+G G +F V + Sbjct: 121 ASRNSVGKSAIDGIATGLGFTFALFVLGAVREILGAGEIFG------------YDVMSWS 168 Query: 179 TDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGNV 231 P L +LPPGAFI LG +L G ++ER + A+ ++ G V Sbjct: 169 GFHPALGFVLPPGAFIALGFILMGVKWLNERRELAAAKKPKQKRASGEAVGVV 221 >UniRef50_B8D723 Electron transport complex protein rnfE n=5 Tax=Buchnera aphidicola RepID=RNFE_BUCAT Length = 227 Score = 205 bits (523), Expect = 7e-52, Method: Composition-based stats. Identities = 114/223 (51%), Positives = 154/223 (69%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 IK + LWKNNS+LVQLLGLCP+LA+T+ A NA+GLG+ TTLVLT+TN IS+ R Sbjct: 2 NIKSFLNNRLWKNNSSLVQLLGLCPVLAMTTNAINAIGLGMTTTLVLTITNTIISSFRKI 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P ++RIPIY+MII+SVV++++ML++AY F LYQSLGIFIPLIVTNCI+VGRA+ A K Sbjct: 62 IPKDLRIPIYMMIISSVVTSIEMLLHAYTFNLYQSLGIFIPLIVTNCIIVGRADLIAYKS 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 S DG IG+G+ AMF +GS+REI+GNGTLF GA+ ++ + + + Sbjct: 122 SIVESFFDGIFIGLGSMFAMFAVGSIREILGNGTLFFGANKIISNIHSSVFFTLLDKKFT 181 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPN 225 +LA+ PPG F+ LG ++A K ID KK + + + N Sbjct: 182 IILAVFPPGGFLILGFLIAIKNFIDLYYKKNTIKNIEQCSCSN 224 >UniRef50_D1Y5W2 Na(+)-translocating NADH-quinone reductase subunit d n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5W2_9BACT Length = 243 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 137/222 (61%), Gaps = 12/222 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MS IV GL+ N V +LG+CP +AVTS+A N L +GLA T VL +N+ IS LR Sbjct: 1 MSNPLKTIVNGLFAENPIFVLVLGMCPTIAVTSSAMNGLSMGLAATAVLIGSNVAISALR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P EIRIP ++++IA V+A+Q++I AY L ++LGIFIPLIV NCI++ RAEAFA+ Sbjct: 61 RFIPDEIRIPSFIVVIAGFVTALQLIIAAYFPALDKALGIFIPLIVVNCIILARAEAFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K G SA DG +G+G T A+ ++G++RE+IG G++F G Sbjct: 121 KNGVFASACDGLGMGLGFTLALILIGAIRELIGAGSVFGANVFAPG------------FY 168 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERA 222 P LLA+L PG FI LG+++A + + R + + AE A Sbjct: 169 QPALLAILAPGGFITLGVLMAVMHQLKIRKELKSLAPLAESA 210 >UniRef50_B8J067 Electron transport complex, RnfABCDGE type, E subunit n=24 Tax=Bacteria RepID=B8J067_DESDA Length = 225 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 96/219 (43%), Positives = 130/219 (59%), Gaps = 13/219 (5%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 I +GLWK +LGLCP LAVT++A N LG+G+A VL L+N+ IS +R Sbjct: 2 SILQEFTKGLWKELPPFRLVLGLCPTLAVTNSADNGLGMGVAVIFVLVLSNMLISMVRSI 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P +RI +++I AS+V AV++L+ AYA+ LYQ LGIF+PLIV NCI++GRAEAFAAK Sbjct: 62 IPKTVRIACFIVIAASLVVAVELLMQAYAYPLYQRLGIFVPLIVVNCIILGRAEAFAAKN 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 G A S DG +G+G T ++ LGSLREI GNGT F + ++ P Sbjct: 122 GVAASIADGLGMGLGFTLSLTFLGSLREIFGNGTWFG-------------QSVMWEGFEP 168 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAER 221 + + PGAFI LGL+LA + + R A + Sbjct: 169 MRIMIQAPGAFICLGLILAAMNMYNYWKAGRGKAVPAPQ 207 >UniRef50_C8WMP6 Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMP6_EGGLE Length = 235 Score = 204 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 84/221 (38%), Positives = 125/221 (56%), Gaps = 13/221 (5%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 V +GL N L Q+LGLCP LAVT+ TN +G+G+ATT VL + + +S LR+ P Sbjct: 11 LSVFSKGLLIENPTLRQMLGLCPTLAVTTAVTNGIGMGVATTFVLVCSGIVVSLLRNIIP 70 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 +R+P ++ +IA V+ V M++ AY L Q+LGI++PLIV NCIV+GRAE FA+K Sbjct: 71 TTMRLPAFITVIAGFVTIVMMVVEAYLPDLNQALGIYLPLIVVNCIVLGRAEVFASKHPV 130 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 +ALDG +G G T + ++ ++RE++G GTL L P Sbjct: 131 KDAALDGLGMGAGFTLTLVLMSAIRELLGAGTLLGFPILL-------------GIVEPMT 177 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPN 225 + ++PPG F LG+++A + + R K+R E E Sbjct: 178 VFIMPPGGFAVLGVLIAISVVFEMRRKRRAGEPEDEAIASQ 218 >UniRef50_Q2W403 Electron transport complex protein rnfE n=3 Tax=Proteobacteria RepID=RNFE_MAGSA Length = 223 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 99/220 (45%), Positives = 143/220 (65%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + +I GLW+NN L LLG+CP +A+T TATN LG+GLAT V+ +NL ++ R+ Sbjct: 3 ASYGRIIKDGLWENNGVLCMLLGMCPTMAMTGTATNGLGMGLATAAVMAASNLMVAMFRN 62 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 + E+RIP+Y++I+A+ V+ V + +NA+ LY+ LG+FIPLIV+NC+ + R EAFAAK Sbjct: 63 YVTHEVRIPVYILIVAANVTFVDLGMNAWMHELYKVLGLFIPLIVSNCLPLARLEAFAAK 122 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 + S LDG +G+G T A+ +G++RE+IG GTLF A LLG WAK+L + + D Sbjct: 123 EPVLPSFLDGLFMGLGFTLALTAIGAVREMIGQGTLFADAALLLGPWAKLLELRVMPADW 182 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAER 221 L+ +LPPG F+ GLM+ K L+D K A A Sbjct: 183 GILVLILPPGGFLIAGLMVVAKRLVDLAGGKEIKMAGAHS 222 >UniRef50_A9KRX0 Electron transport complex, RnfABCDGE type, E subunit n=102 Tax=Bacteria RepID=A9KRX0_CLOPH Length = 253 Score = 202 bits (515), Expect = 6e-51, Method: Composition-based stats. Identities = 83/212 (39%), Positives = 126/212 (59%), Gaps = 13/212 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MS+ + I G+ K N V +LG+CP LAVT++A N +G+GL TT VL ++N+ IS LR Sbjct: 1 MSKALERIYNGVIKENPTFVLMLGMCPTLAVTTSAINGVGMGLTTTAVLIMSNMLISMLR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 P ++R+P +++++AS V+ VQ+L+ AY L SLGI+IPLIV NCI++GRAEA+A+ Sbjct: 61 KAIPDKVRMPAFIVVVASFVTIVQLLLQAYLPSLNDSLGIYIPLIVVNCIILGRAEAYAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K S DG +G+G T + ++G REI+G GT F + + Sbjct: 121 KYPVYPSIFDGVGMGLGFTVGLTLIGLFREILGAGTAFGFSIMP-------------DSY 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKK 212 PF + +L PGAF L ++ A + + + Sbjct: 168 EPFSIFVLAPGAFFVLAMLTALQNKLKLKSAT 199 >UniRef50_A6V1T4 Electron transport complex protein rnfE n=182 Tax=Bacteria RepID=RNFE_PSEA7 Length = 239 Score = 201 bits (512), Expect = 1e-50, Method: Composition-based stats. Identities = 113/234 (48%), Positives = 155/234 (66%), Gaps = 3/234 (1%) Query: 1 MSE--IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIST 58 MSE ++++ GLW+NN LVQLLGLCPLL +++ NALGLGLAT LVL +N +S Sbjct: 1 MSEQGLREIARDGLWRNNPGLVQLLGLCPLLGTSNSTVNALGLGLATLLVLVCSNAAVSL 60 Query: 59 LRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 +R IR+P +VMIIA++ + +++L+ A+ + LYQ LGIFIPLI TNC+++GRAEAF Sbjct: 61 VRGAVSEAIRLPAFVMIIAALTTCIELLMQAWTYELYQILGIFIPLITTNCVILGRAEAF 120 Query: 119 AAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFH 178 AAK G ++ DG G+G + VLG LRE++G GTL L G A+ +++IF Sbjct: 121 AAKNGVLRASFDGLLTGLGFALVLLVLGGLRELLGQGTLLADMQLLFGPAAETWKIQIFP 180 Query: 179 TDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKR-RAEAAAERALPNGETGNV 231 FLLA+LPPGAFI LGL++A K IDE + +R RA+A A P + V Sbjct: 181 HYQGFLLAILPPGAFIMLGLLIALKNRIDESLAERARAQAGDVPASPQRQRVRV 234 >UniRef50_D1PN89 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit n=8 Tax=Bacteria RepID=D1PN89_9FIRM Length = 230 Score = 201 bits (511), Expect = 2e-50, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 13/208 (6%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 V G+ + N L +LG C LAVT+T + A+G+GL+ T VL +N+ IS LR P Sbjct: 8 WKVFTAGIIRENPVLRLVLGCCSALAVTTTVSGAVGMGLSMTFVLVCSNIVISALRKVIP 67 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 ++ +P Y++IIA+ V+ VQM++ A+ LY+SLG+F+ LIV NCI++GRAE FA K Sbjct: 68 GKVHLPCYIVIIATFVTVVQMVLQAFVPDLYKSLGVFLALIVVNCIILGRAEMFACKNTV 127 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 SALDG +G+G M ++ S+REIIG+G+ + Sbjct: 128 VDSALDGLGMGIGYILTMTLMSSIREIIGSGSWLGITIIP-------------ESVDRMT 174 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKK 212 + PG F G ++AG ++ ++ K Sbjct: 175 IMNSAPGGFFVFGCLMAGCVWLERKLNK 202 >UniRef50_D0L1N2 Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1N2_HALNC Length = 231 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 99/228 (43%), Positives = 146/228 (64%), Gaps = 1/228 (0%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 +D+ VQGLWKNN LVQ+LG+CP++A+++T N+LGL +AT L + ++N S +RHW Sbjct: 5 SYRDLAVQGLWKNNPGLVQILGMCPMMAISNTVVNSLGLAMATILTMVVSNGLASVIRHW 64 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 E+R+P++VM++ASVV+ +++ +NAY LY LGIF+PLIVTNCIV+ R E FAA+ Sbjct: 65 VRPEVRLPVFVMVVASVVTVIELWMNAYLNTLYHVLGIFLPLIVTNCIVIARVEGFAARN 124 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 S DG +G+G + LG +RE++G GTL A L G A + + + Sbjct: 125 PVLPSLYDGLMMGLGFGLVLVALGVIRELLGFGTLLANAQQLFGPMAANWTIHVLPEQAH 184 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGN 230 FLLA+LPPGAF+ L +++A K I++ R A+ A LP T + Sbjct: 185 FLLAILPPGAFMALAILIAIKQAIEQCRAARLAQPVALE-LPKAATAS 231 >UniRef50_Q1PW71 Strongly similar to Na(+)-translocating NADH:quinone reductase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW71_9BACT Length = 210 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 81/219 (36%), Positives = 129/219 (58%), Gaps = 16/219 (7%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 +GL+K N+ V +LG+CP LAVT++ N + +G A T VL +N IS +R + P Sbjct: 6 WQEFSKGLFKYNALFVLVLGICPSLAVTTSLKNGVSMGGAATFVLVSSNFIISLIRPYVP 65 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAF-GLYQSLGIFIPLIVTNCIVVGRAEAFAAKKG 123 EIRIP ++++IAS V+ V++++ AY + SLGIFIPLIV NCI++ RAEAFA K Sbjct: 66 REIRIPCFIVVIASFVTIVELMMKAYLPTEINASLGIFIPLIVVNCIILYRAEAFAYKNK 125 Query: 124 PALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPF 183 P +S LDG IG+G T ++ ++ +RE++G GTLF +++ P Sbjct: 126 PFVSILDGLGIGLGWTLSLCLVSGVREMLGAGTLFG--------------LKLSERYEPA 171 Query: 184 LLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERA 222 + ++ PGAFI GL++ +++K ++ ++ Sbjct: 172 SIMIMAPGAFIITGLLMGLFNW-RKQLKSEKSMKVYQKN 209 >UniRef50_A7HK22 Electron transport complex, RnfABCDGE type, E subunit n=26 Tax=Bacteria RepID=A7HK22_FERNB Length = 217 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 92/229 (40%), Positives = 149/229 (65%), Gaps = 15/229 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ +G+ K+N VQ+LG+CP LA T++A N G+GLA T VL ++N+ IS++R Sbjct: 1 MASKISEFTKGIIKDNPTYVQVLGMCPTLATTTSAKNGFGMGLAATAVLVMSNVVISSIR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 P +IRIPI++ +IA+ V+ V +L++A+ + L+++LG+FIPLIV NCI++GRAEA+A+ Sbjct: 61 KTVPEKIRIPIFITVIATFVTIVDLLMHAFTYDLWKTLGLFIPLIVVNCIIMGRAEAYAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K G S LDG +G+G T ++ +LGS+RE++GNG++FD + I+ Sbjct: 121 KHGVLDSLLDGLGMGVGFTLSLTLLGSIRELLGNGSIFD--------------ITIWGKA 166 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETG 229 + +LPPGA++ LGL+ A I + K+ RA+ +A++A + G Sbjct: 167 FNMFVMILPPGAYLTLGLLAALFAAISIK-KEERAKKSAQQAGQAQKVG 214 >UniRef50_C7GZP2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZP2_9FIRM Length = 272 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 84/220 (38%), Positives = 127/220 (57%), Gaps = 14/220 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MS++ + +G+ K N LV LLG CP LA T++A N +G+G++T +VLT +N+ IS L+ Sbjct: 1 MSKL-QIFTKGIIKENPVLVLLLGTCPTLATTTSAINGVGMGVSTLVVLTCSNIAISALK 59 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 P ++RIP Y+++IA V+ VQ+L+ Y L ++LG+FIPLIV NCI++GRAE FA+ Sbjct: 60 KVIPDKVRIPCYIVVIAGFVTIVQLLLKGYVPTLDKALGLFIPLIVVNCIILGRAEMFAS 119 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K S LDG +G+G T A+ +G +REI+GNGT F A Sbjct: 120 KNSLLDSILDGLGMGVGFTLALGCMGLIREIVGNGTAFGFALT-------------KSFL 166 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 +P L M+ PG F +++A ++ E + Sbjct: 167 TPMSLFMMAPGGFFVFAILIALINWRSNGKAIKKKEIGCQ 206 >UniRef50_C5SAZ4 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Proteobacteria RepID=C5SAZ4_CHRVI Length = 220 Score = 197 bits (500), Expect = 3e-49, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 128/211 (60%), Gaps = 13/211 (6%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 D ++GLW+ N V LLG+CP+LAVTST NA+ +GLATT VL ++L IS LR+W P Sbjct: 14 DTFLRGLWEENPVFVMLLGMCPVLAVTSTTLNAIAMGLATTFVLVCSSLLISLLRNWIPK 73 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 ++RI Y++IIA+ V+ V I A + LY +LG FI LIV NC+++GRAEA+A+K+ Sbjct: 74 QVRIASYIVIIATFVTIVDYAIQAISLELYAALGAFIQLIVVNCVILGRAEAYASKQRLH 133 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLL 185 + ++ +G+G T A+ LG++RE++GNGTL P+L+ Sbjct: 134 TTLVNSLGMGVGFTLALLALGTVREVLGNGTLLG-------------IPLFGPDFQPWLV 180 Query: 186 AMLPPGAFIGLGLMLAGKYLIDERMKKRRAE 216 +LPPG F LG+ L + + +R A+ Sbjct: 181 MILPPGGFFVLGVWLLLFNWLRQSKVRRAAQ 211 >UniRef50_D1B8H9 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Bacteria RepID=D1B8H9_THEAS Length = 239 Score = 195 bits (497), Expect = 8e-49, Method: Composition-based stats. Identities = 95/205 (46%), Positives = 128/205 (62%), Gaps = 13/205 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ + I GL K N VQ +GLCP LAVT++A N LG+G+A T VL +N+ IS LR Sbjct: 1 MASFIERIRGGLAKENPVFVQAIGLCPTLAVTTSAVNGLGMGVAATAVLMGSNVVISMLR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P +IRIP ++++IA V+ +Q L++AYA L +SLGIFIPLIV NCI++ RAEAFA Sbjct: 61 RFIPNQIRIPAFIVVIAGFVTIIQFLVSAYAPVLDKSLGIFIPLIVVNCIILARAEAFAF 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K G S DG +G+G T A+ +LGS+REIIG GTLF G L G Sbjct: 121 KNGVIPSLFDGIGMGLGFTVALMILGSIREIIGAGTLF-GFHVLPG------------YV 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYL 205 P L+ +L PG F+ +GL++ Sbjct: 168 QPALVMILAPGGFLTMGLIMGFLNY 192 >UniRef50_C0R023 SoxR-reducing system protein RsxE n=2 Tax=Brachyspira RepID=C0R023_BRAHW Length = 219 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 84/212 (39%), Positives = 128/212 (60%), Gaps = 5/212 (2%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 V ++G+WKNN VQ+LG+CP LAVTS+ NA+G+ +AT VL ++ IS ++ Sbjct: 5 QVFMEGVWKNNPTFVQVLGMCPSLAVTSSVMNAIGMSVATIFVLVCSSALISLIKKIYAN 64 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 E+RI Y+++IA+ V+ +++ A + L +LG +IPLIV NCI++GRAEAFA K G Sbjct: 65 EVRIMGYIVVIAAFVTLTDIVMKAKFYTLSLALGPYIPLIVVNCIILGRAEAFANKNGII 124 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTL--FDGADALLGSWAKVLRVEIFHTDS-- 181 S D G+G A+ +L S+RE++GNGT FD L G + + + + Sbjct: 125 PSIFDALGNGVGFFIALTLLASIREVLGNGTWLGFDIVGTLRGFFESAMPFALNAYNEIT 184 Query: 182 -PFLLAMLPPGAFIGLGLMLAGKYLIDERMKK 212 P+++ ++ PGAF LG ++A K ID R K Sbjct: 185 TPWVVMIMAPGAFFTLGTLIAIKRAIDARGGK 216 >UniRef50_Q3A7X1 NADH:ubiquinone oxidoreductase, RnfE subunit-like n=3 Tax=Bacteria RepID=Q3A7X1_PELCD Length = 202 Score = 193 bits (492), Expect = 3e-48, Method: Composition-based stats. Identities = 96/209 (45%), Positives = 137/209 (65%), Gaps = 13/209 (6%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ + GLW+NN+ +LG+CP LAVT++A N LG+GLATT VL +N+ +S LR Sbjct: 2 KLWAIFSSGLWRNNAIFKLVLGMCPTLAVTTSAMNGLGMGLATTSVLLCSNMAVSALRTL 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 PA++RIP +++IIA+ V+ VQ+L+ AYAF LYQ+LGIFIPLIV NC+++GRAEAFA+++ Sbjct: 62 IPAKVRIPAFIVIIATFVTVVQLLMEAYAFELYQALGIFIPLIVVNCLILGRAEAFASRQ 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 SA DG +G+G T A+ +LG +RE++G G+LF G P Sbjct: 122 PLWASAADGAGMGLGFTLALVMLGGVRELLGAGSLFGLQMTGAG-------------FHP 168 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMK 211 LL +LPPGAF+ LG +LA R + Sbjct: 169 MLLMILPPGAFLALGFLLAAINGWKNRKR 197 >UniRef50_B8FN67 Electron transport complex, RnfABCDGE type, E subunit n=8 Tax=Bacteria RepID=B8FN67_DESAA Length = 203 Score = 192 bits (489), Expect = 6e-48, Method: Composition-based stats. Identities = 89/208 (42%), Positives = 121/208 (58%), Gaps = 7/208 (3%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + +GLW+ +LGLCP L VT+T N +G+GLATT VL NL +S LR Sbjct: 3 KTLTQEFTKGLWQEIPPFRLVLGLCPTLGVTTTVQNGVGMGLATTFVLVCANLLVSALRK 62 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 P ++RI ++++IA+ V+ V+ML+ A+ + LY LGIFIPLIV NCIV+GRAEAFA K Sbjct: 63 VIPPKVRIACFIVVIATFVTLVEMLMQAFTYPLYGMLGIFIPLIVVNCIVLGRAEAFAYK 122 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 S DG IG+G T A+ LG++RE+IG G + L + + Sbjct: 123 NPILPSLADGLGIGLGFTMALGALGAVREVIGTGCF-------TVPFGPTLTILSADWYT 175 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDER 209 PF + PGAFIGLGLML L+ + Sbjct: 176 PFSFMVQAPGAFIGLGLMLCLMNLVPSK 203 >UniRef50_A1WT45 Electron transport complex, RnfABCDGE type, E subunit n=4 Tax=Bacteria RepID=A1WT45_HALHL Length = 219 Score = 192 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 84/219 (38%), Positives = 120/219 (54%), Gaps = 13/219 (5%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 D + G+W+ N V LLG+CP+LAVT+T NAL +GLATT VL + +S LR + Sbjct: 11 TMDTFLSGVWRENPVFVMLLGMCPVLAVTNTTENALAMGLATTFVLVCSTGLVSVLRDFI 70 Query: 64 PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKG 123 P E+RI Y++IIAS V+ V I A + +Y +LG FI LIV NC+++GRAEAFA++K Sbjct: 71 PKEVRIASYIVIIASFVTVVDYAIQAISLDIYNALGAFIQLIVANCMILGRAEAFASRKP 130 Query: 124 PALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPF 183 + +D +G G T A+ LG++RE++G G + P+ Sbjct: 131 LGKTLVDALGVGAGFTLALLCLGTVRELLGAGEILG-------------IQVFADRFEPW 177 Query: 184 LLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERA 222 ++ +LPPG F L L I ER +R A A Sbjct: 178 VIMLLPPGGFFVLAGWLLLFAWIKERQNQRAAAGKEATA 216 >UniRef50_A5N7M8 RnfE n=5 Tax=Clostridiales RepID=A5N7M8_CLOK5 Length = 213 Score = 192 bits (487), Expect = 1e-47, Method: Composition-based stats. Identities = 71/220 (32%), Positives = 125/220 (56%), Gaps = 13/220 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M + ++ +GL N LV L LCP LA TS+A N L +GL V+T N +S ++ Sbjct: 1 MKGLWNIFKKGLVSENPILVLALSLCPALATTSSAVNGLTMGLCVLFVITCNNTVVSIIK 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + ++R+P+Y+ IA++V+ V++++ AYA LY LGI++ L+V I++ RAE FA+ Sbjct: 61 KFVNPKVRVPVYITCIATIVTVVELVLEAYAPELYSQLGIYLALVVVFAIILARAETFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K S DG +G G T A+ ++ +RE+ G GT+F ++ + Sbjct: 121 KNPVIPSFFDGLGMGCGFTLALVLISIIRELFGAGTVFG-------------IHVMWASY 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 +P L+ +LPPGAFI +G +++ + ++ ++K + + + Sbjct: 168 NPALIMILPPGAFILIGYLVSLVKVYNQHVEKVKMKKLEQ 207 >UniRef50_C8PN80 Na(+)-translocating NADH-quinone reductase subunit d (Na(+)-translocating nqr subunit d) n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PN80_9SPIO Length = 272 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 125/216 (57%), Gaps = 14/216 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M E + GL K N ++ ++GLC LA+T++ N +G+GLA T V+ L+ + IS R Sbjct: 1 MKEYVRIFTNGLVKENPLIMLMIGLCSALAITTSVANGIGMGLAMTFVIVLSEMIISMFR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P +IRIPI++++IAS + V +L+ A+ L +S+GIFI LIV NCI++GR E+FA+ Sbjct: 61 KFIPNDIRIPIFIIVIASFTTIVDLLMQAFLPELSESMGIFIKLIVVNCIIMGRVESFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K+ P + D +G+G T + V+ ++RE++G+GT+ V + D Sbjct: 121 KESPIKAMADALGMGLGFTWVLVVMSAIRELLGSGTVLG--------------VRLLPDD 166 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAE 216 PG F GL++A YLI ++ K+R+ Sbjct: 167 YLIKFFANSPGGFFVFGLLIALTYLIQDQRKQRKIR 202 >UniRef50_Q73PG4 Na(+)-translocating NADH-quinone reductase, D subunit n=1 Tax=Treponema denticola RepID=Q73PG4_TREDE Length = 219 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 74/225 (32%), Positives = 120/225 (53%), Gaps = 15/225 (6%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + + G+ +NN LV ++GLC LAVT+ N LG+GLA T V+ ++ L IS R Sbjct: 2 KNLSIFTNGIIRNNPLLVLMIGLCSSLAVTTNILNGLGMGLAMTFVIVMSELIISIFRKL 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P +IRIP+++++IAS + V +L+ AY L ++G+FI LIV NCI++GR E+FA+K+ Sbjct: 62 IPQDIRIPVFIIVIASFTTIVDLLMQAYTPALADAMGLFIKLIVVNCIIMGRVESFASKE 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 P S LD +G+G T + ++ ++REI+G+G+L Sbjct: 122 SPGKSVLDALGMGVGYTIVLVLISAIREILGSGSLAGNV--------------FIPEAYH 167 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 PG F G+M++ L +++ +R + P E Sbjct: 168 IRFFANAPGGFFVFGIMISI-NLFAKKLLERPKKKIQSSPAPQTE 211 >UniRef50_C7RDT4 Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDT4_ANAPD Length = 215 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 123/210 (58%), Gaps = 14/210 (6%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + V ++G++ NN VQ +G+C +LA++S+ NA+G+G++ V+ ++NL IS LR+ Sbjct: 20 ENLGKVFIEGIFANNPVFVQTVGMCSVLAISSSLINAIGMGVSVIFVVVMSNLVISLLRN 79 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 + EIRIP +++IIA V+ VQM I AY L +SLGIFIPLIV NC+++ RAE FA+ Sbjct: 80 FISDEIRIPAFIVIIAGFVTMVQMAIKAYLPALDESLGIFIPLIVVNCLILARAEGFASS 139 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 GP S +DG G+G T A+ +L RE++G GTLF +I Sbjct: 140 HGPVASIVDGLGQGLGYTFAISLLAFFRELLGAGTLFGA--------------QIIPEAY 185 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMK 211 P +FI LG+++A I ++ K Sbjct: 186 TIGFLQQPASSFIVLGMLVAAFNAISKKRK 215 >UniRef50_B2A682 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A682_NATTJ Length = 206 Score = 186 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 6/209 (2%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + + QGL K N QLLGLCP LAVT TA N+LGLG AT VL N+ IS +++ Sbjct: 2 KFSEAFTQGLLKENGLYRQLLGLCPALAVTQTAMNSLGLGAATMAVLLAANIVISLVKNL 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P +IRIP Y++IIA+ V+ V M + A+ L+ +LGIFIPLIVTNC+++GRAEAFA+K+ Sbjct: 62 IPKKIRIPSYIVIIATFVTIVDMFLEAFTPDLHAALGIFIPLIVTNCLILGRAEAFASKE 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 + D +G+G T + LG +RE+ G G+LF L P Sbjct: 122 KVTSAIGDALGMGIGFTLGLLSLGVVRELFGKGSLFGW------PVLHELFGAFGLEFQP 175 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMK 211 L+ + P GAF LG++LA ++ +R++ Sbjct: 176 ALIFIQPAGAFFALGILLALMNIVYKRLQ 204 >UniRef50_Q5P1B5 NADH:ubiquinone oxidoreductase, subunit RnfE n=3 Tax=Rhodocyclaceae RepID=Q5P1B5_AZOSE Length = 232 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 99/219 (45%), Positives = 146/219 (66%), Gaps = 8/219 (3%) Query: 10 QGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRI 69 GLWK N+ LVQLLGLCP+LAV+++ NA+ LGLAT +V+ ++N +++LR++ P EIRI Sbjct: 12 NGLWKQNTGLVQLLGLCPILAVSTSVVNAVSLGLATVVVMAVSNFAVASLRNFIPYEIRI 71 Query: 70 PIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSAL 129 P++++IIA++ + V + NAY LY LGIFIPLIVTNCIV+ R EA+AAK P S + Sbjct: 72 PVFILIIAALTTVVDLAFNAYLHDLYLVLGIFIPLIVTNCIVLARVEAYAAKNDPVASTV 131 Query: 130 DGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP-FLLAML 188 DG +G+G + VLG +RE++G+GTLF G + ++ + + +F D P FL+ +L Sbjct: 132 DGIMMGLGLVWLLGVLGGIRELVGSGTLFSGIEMVI---PGLSPLSVFGDDYPGFLIGVL 188 Query: 189 PPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 PPGAF LG ++A + R++ R A R + E Sbjct: 189 PPGAFFALGCLIA----LSNRIRMRAAAGKPARPASDSE 223 >UniRef50_A1F5P3 Electron transport complex protein RnfE n=1 Tax=Vibrio cholerae 2740-80 RepID=A1F5P3_VIBCH Length = 177 Score = 178 bits (453), Expect = 8e-44, Method: Composition-based stats. Identities = 97/150 (64%), Positives = 125/150 (83%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E + +++ G+W NN ALVQLLGLCPLLAV+ST TNALGLG+AT LVL +N+T+S +R Sbjct: 1 MNENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P E+RIP++VMIIAS+V+ VQ+L+NAYA+GLY SLGIFIPLIVTNCI++GRAEAFA+ Sbjct: 61 DYVPKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRAEAFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLRE 150 K +ALDGF +G+G T + VLGSLRE Sbjct: 121 KNDVLPAALDGFWMGLGMTSVLVVLGSLRE 150 >UniRef50_A4SQL7 Na(+)-translocating NADH-quinone reductase subunit D n=132 Tax=Bacteria RepID=NQRD_AERS4 Length = 210 Score = 178 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 8/213 (3%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 SE+K +++ + NN +Q+LG+C LAVTS A + LA T V +NL IS +R+ Sbjct: 5 SEMKKLLLTPVLGNNPIALQVLGVCSALAVTSQMKTAFVMTLAVTAVTAFSNLFISLIRN 64 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 P +RI + +IAS+V V ++ AYA+ + + L +F+ LI+TNCIV+GRAEA+A K Sbjct: 65 QIPNSVRIIAQMAVIASLVIVVDQVLKAYAYEISKQLSVFVGLIITNCIVMGRAEAYAMK 124 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 P S LDG G+G + + ++REI+G+GT F L + Sbjct: 125 SAPLPSFLDGIGNGLGYGAVLLTVATVREILGSGTWFGIELLPLVNNGGW--------YV 176 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRR 214 P L +LPP AF +GL++ G D + + + Sbjct: 177 PNGLLLLPPSAFFIIGLIIWGVRTRDPKQVEAK 209 >UniRef50_B7UZU0 Na(+)-translocating NADH-quinone reductase subunit D n=228 Tax=Bacteria RepID=NQRD_PSEA8 Length = 224 Score = 178 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 12/225 (5%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 I++V+ +++NN +Q+LG+C LAVTS A + +A TLV +NL IS +R Sbjct: 8 IREVLFNPVFQNNPIGLQILGICSALAVTSNLKTATVMAIALTLVTGFSNLFISMIRRQI 67 Query: 64 PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKG 123 P+ IR+ + ++IIAS+V V ++ AYA+ L + L +F+ LI+TNCIV+GRAEAFA Sbjct: 68 PSSIRMIVQMVIIASLVIVVDQVLKAYAYSLSKQLSVFVGLIITNCIVMGRAEAFAMANP 127 Query: 124 PALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPF 183 P +S DG G+G + + VLG +RE+ G G L+ + + P Sbjct: 128 PLVSFFDGIGNGLGYSAMLLVLGFVRELFGAGKLYGISVLPTVNDGGW--------YQPN 179 Query: 184 LLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGET 228 L +LPP AF +GL++ KK + EA + P + Sbjct: 180 GLLLLPPSAFFLIGLIIWALRT----WKKDQVEAPTYKMAPQVSS 220 >UniRef50_A8ZSV5 RnfA-Nqr electron transport subunit n=2 Tax=Desulfobacteraceae RepID=A8ZSV5_DESOH Length = 207 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 104/209 (49%), Gaps = 13/209 (6%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 + +QG+ N QLLGLCP+LAVT +A+ + A VL N+ IS +R+ Sbjct: 8 MERFLQGIIPENPVYRQLLGLCPVLAVTGNMQSAMTMAGAVLFVLFCANVMISLIRNILK 67 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 +RI I+ + IA+ V+ V + AY + + ++LG +IPLI+ NCI++ R E A+K+ Sbjct: 68 PHLRIVIFTLTIATFVTIVDRFLAAYMYNMSKALGPYIPLIIVNCIIICRCEVCASKQSV 127 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 + D +G A+ + ++REI+G G F G L W ++ Sbjct: 128 FHAGADAIGQSLGFALALASIATVREILGTGMFF-GLPVLPDVWPD------------WV 174 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKR 213 + LPPGAF GL+L K+ Sbjct: 175 IMALPPGAFFTFGLLLGLVNWFTANRAKK 203 >UniRef50_A6TT08 RnfA-Nqr electron transport subunit n=8 Tax=Bacteria RepID=A6TT08_ALKMQ Length = 209 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 66/217 (30%), Positives = 120/217 (55%), Gaps = 13/217 (5%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + K + G+ +N Q+LG+C LAVT+ N+L +G+ V L++ T+S LR Sbjct: 3 KKTKRIFQLGILNDNPVFRQILGICSALAVTNLMINSLVMGIGLIFVTALSSFTVSVLRK 62 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 TP IR+ + +II++ V V +++ AY + +LG ++ LI+TNCI++GR E++A Sbjct: 63 HTPRHIRMMVQTLIISAYVIIVDIVLKAYYPSMSDALGPYVGLIITNCIIMGRCESYAQN 122 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 P+L+ LDG + G+G T + ++ RE++G G++F ++G+W Sbjct: 123 NPPSLAFLDGIASGLGYTFVLLLIAFFRELLGFGSIFG--ITVMGAWWP----------- 169 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAA 218 ++ ++PPGAF LG+++ + +K + A Sbjct: 170 RWIFMIMPPGAFFMLGILIWVMNSLVPSEEKETSVAG 206 >UniRef50_D1VUK9 Electron transport complex protein RnfE n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUK9_9FIRM Length = 199 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 118/209 (56%), Gaps = 12/209 (5%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ V + KNN +QL+GLC +LA+T+ N++ +G+A T VL ++N +S LR+ Sbjct: 2 KLSKVFTDAMLKNNPTFMQLIGLCSVLAITNNVINSVSMGIAVTFVLIMSNGVVSALRNV 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P +IRIP ++++IA+ V+ VQM++ AYA +Y +LGIF+PLIV NC ++G AE FA K Sbjct: 62 IPDKIRIPCFIVVIATFVTLVQMILQAYATPIYLALGIFLPLIVVNCCILGEAEGFAYKN 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 S +DG G+G T A+ ++G +RE G G+L + + Sbjct: 122 KLIPSLVDGLGTGVGYTLAVLIMGVVREFFGYGSLLNIQIIPKEIYP------------G 169 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMK 211 + P GAFI LG ++A + R Sbjct: 170 IGILAAPAGAFILLGFVIAAFKNLLTRRA 198 >UniRef50_Q12W80 Electron transport complex protein rnfE n=2 Tax=Methanosarcinaceae RepID=Q12W80_METBU Length = 203 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 11/211 (5%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + ++G+ K+N +LGLCP LAVT++ NA+G+ T VL +NL +S LR Sbjct: 2 DPLSEFIRGITKDNPIFGLVLGLCPTLAVTTSIDNAIGMSAGTAFVLICSNLMVSGLRKQ 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 PA +R+PI+++IIA+ VS V+M++ AY +Y +LG+FIPLIV NCI++GRAEA+A K Sbjct: 62 IPASVRLPIFILIIATFVSIVKMVMEAYFPPMYAALGVFIPLIVVNCIIIGRAEAYANKN 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 S +D G + ++G +RE++G G + L + +P Sbjct: 122 NMFYSLIDALGSSAGFLLVLVLIGGIRELLGTGGIAIFGTQL-----------VSIPINP 170 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKR 213 +L PGAF+ +G+++A + R Sbjct: 171 ITFMILSPGAFLTIGILMAIVNHRRAKKLAR 201 >UniRef50_D2MN20 Rnf-Nqr subunit, membrane protein (Fragment) n=4 Tax=Erysipelotrichaceae RepID=D2MN20_9FIRM Length = 216 Score = 170 bits (430), Expect = 4e-41, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 113/210 (53%), Gaps = 3/210 (1%) Query: 8 IVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEI 67 + L + LGLC LA++++ NALG+G+ VL L+N+ +S +RH TP +I Sbjct: 9 FLGRLISESPVFSMYLGLCSTLAISTSLNNALGMGIGVIFVLVLSNMLVSMVRHITPDDI 68 Query: 68 RIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALS 127 IP+Y+ IIA++V+ + ML++A+ L+ +LG F+ LI NCI++GRAEAFA K S Sbjct: 69 HIPVYITIIATLVTVLSMLMHAFTPTLFTALGAFLDLITVNCIILGRAEAFACKNNVVDS 128 Query: 128 ALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAM 187 DGF +G+ T A+ + +R+I+G G L + + + + +V++ L Sbjct: 129 VKDGFQMGLAYTGALLCMAVIRQIVGTGIL---SLSNPFTDQLIFKVQLIPVGFEIPLFT 185 Query: 188 LPPGAFIGLGLMLAGKYLIDERMKKRRAEA 217 GAFI + A R+ + Sbjct: 186 EQFGAFITFACIAALVANYKNRLATQGKRG 215 >UniRef50_Q7VNU6 Na(+)-translocating NADH-quinone reductase subunit D n=16 Tax=Bacteria RepID=NQRD_HAEDU Length = 207 Score = 169 bits (429), Expect = 6e-41, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 8/212 (3%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + +K +++ + NN +Q+LG+C LAVT+ A + +A +LV +++ IS +R+ Sbjct: 4 NNLKKLLLSPISDNNPIALQILGICSALAVTTQLQTAFVMAIAVSLVTAFSSMFISMIRN 63 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 + P IRI + + IIAS+V V ++ AY + L + L +F+ LI+TNCIV+GRAEAFA K Sbjct: 64 YIPNSIRIIVQMAIIASLVILVDQILRAYVYDLSKQLSVFVGLIITNCIVMGRAEAFAMK 123 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 P S +DG G+G + ++ LRE+IG+G +F + ++ Sbjct: 124 SAPLESFVDGIGNGLGYGAMLVIVAFLRELIGSGKIFG--------VTVLQTIQDGGWYQ 175 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKR 213 L +L P AF +G ++ ++ Sbjct: 176 ANGLFLLAPSAFFIIGFVIWAIRTWKPEQVEK 207 >UniRef50_A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase subunit D n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU8_ACHLI Length = 219 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 112/211 (53%), Gaps = 12/211 (5%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + ++ G+ + N +V +LG+C LAVT+ NA+ +G+ T V+ +++ +S +R+ Sbjct: 20 KKWFLILKNGISEENPIIVSVLGICSALAVTNRVENAIVMGIGVTFVIMASSMMVSMMRN 79 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 P+++R+ +++II+ VQM + A+ + +LG + LI+TNCIV+GRAEAFA K Sbjct: 80 LIPSKVRMVAFMVIISMFTIVVQMFLQAFLPVVAANLGAYTGLIITNCIVMGRAEAFAIK 139 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 + +DGF+ GMG T + + ++RE + GT + +W Sbjct: 140 NPVKYTIIDGFANGMGYTLVLIAIAAVREPLAFGTFLGMSIPGFDNWIN----------- 188 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKK 212 + + L PG F L L+ + ++ ++ Sbjct: 189 -WNVMALAPGGFFVLTLLAWLVRTLTKKYEE 218 >UniRef50_Q2LXT9 Sodium-translocating NADH-quinone reductase subunit D n=3 Tax=Deltaproteobacteria RepID=Q2LXT9_SYNAS Length = 214 Score = 160 bits (404), Expect = 4e-38, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 18/213 (8%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 +++ G+ N L +CP + +T++ N L LG A V ++ TI+ ++++ Sbjct: 17 ELLFNGILLENPIFRLALSMCPAVGLTTSIKNGLLLGTAVLFVQVFSSCTIAAIKNFIHP 76 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 IRIP Y + IA+ V+ + +++ AY Y+ +G+F+ LIV I+ R E FA K Sbjct: 77 RIRIPTYTLTIATWVTVIDLVLAAYVPEAYKQVGLFVKLIVAFAIITMRLEMFACKNTVT 136 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLL 185 S DG +G+G M +G +RE++G GTL P L Sbjct: 137 SSFFDGVGMGIGFMVGMVTIGFVRELLGAGTLLGYDVL---------------GFKPLLF 181 Query: 186 AMLPPGAFIGLGLMLAGKYLID---ERMKKRRA 215 +LP F +G+M+A I+ R K+R++ Sbjct: 182 FVLPAAGFFCVGIMMAMFNYIEVVFNRSKERKS 214 >UniRef50_Q3KM82 Na(+)-translocating NADH-quinone reductase subunit D n=15 Tax=Chlamydiales RepID=NQRD_CHLTA Length = 213 Score = 157 bits (396), Expect = 4e-37, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 3/212 (1%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 LW NN L+ +LG+C LAVT+T T AL +G A + V ++ +S LR Sbjct: 5 KSYLTYFTDALWINNQPLIAILGICSALAVTTTVTTALTMGFAVSFVTGCSSFVVSLLRK 64 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 TP +R+ ++II+ V + + A+ F + ++L +F+ LI+TNCIV+GRAE+ A Sbjct: 65 ITPESVRMIAQLIIISLFVILIDQFLKAFFFTISKTLSVFVGLIITNCIVMGRAESMARH 124 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 P + LDG G+G + + +RE+ G GT+ + Sbjct: 125 VSPIPAFLDGLGSGLGYGWVLVCISIIRELFGFGTILGFRVIPEILYTSAAHP---DGYE 181 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKR 213 L +L P AF LG+M+ +I KR Sbjct: 182 NLGLMVLAPSAFFLLGIMIWIVNIIRAPKTKR 213 >UniRef50_D1PJN1 Putative electron transport complex protein RnfE n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN1_9FIRM Length = 405 Score = 136 bits (343), Expect = 5e-31, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 16/203 (7%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 + +W +N +V LGL P++ AL L +A+ L++T T + + H + Sbjct: 200 KIRSDHIWLSNPVMVCGLGLAPVVGAALDGERALILCVASLLLITFTRVLAVAVCHLSGN 259 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 R IY A + V +L+ + +LGI++P++V +V R E FA + Sbjct: 260 RFRPIIYSYAAALLYIPVYILLYEFFGNSLTALGIYLPILVVEPAIVKRME-FAELEPLR 318 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLL 185 + GF+ G+G A+ ++G LRE + +GT+F +V+ + + L Sbjct: 319 DALRHGFNNGIGMCVALLIVGCLREFLASGTVFG---------HEVIHMALLP------L 363 Query: 186 AMLPPGAFIGLGLMLAGKYLIDE 208 A P G F+ +G++ A + Sbjct: 364 AAQPAGGFVLVGVIAAVWCAVAN 386 >UniRef50_Q2NSZ5 Electron transport complex protein rnfA n=11 Tax=Gammaproteobacteria RepID=RNFA_SODGM Length = 193 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 54/159 (33%), Positives = 86/159 (54%), Gaps = 6/159 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ + + + NN LV+ LGLCP + V+ ALG+G+ATT V+TL ++ + Sbjct: 1 MNGYLMLFIGTVLVNNFVLVKFLGLCPFMGVSKKVETALGMGMATTFVMTLASICAWLIN 60 Query: 61 HWTPAEIRIP-----IYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + + IP ++ IIA VV ++++ + LY+ LGIF+PLI TNC V+G A Sbjct: 61 DFILLPLNIPYLRTLAFIFIIAVVVQFTELVVRKTSPALYRLLGIFLPLITTNCAVLGVA 120 Query: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREIIG 153 + L SAL GFS +G + M + ++RE + Sbjct: 121 LLNVNENHNFLQSALYGFSAAVGFSLVMVLFAAIRERLA 159 >UniRef50_A6NPN3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN3_9BACE Length = 240 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 14/211 (6%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + + +GL +N A++ LL + +L ++T LG GLA T VL TNL + LR Sbjct: 41 RVVSLFRRGLALHNPAVILLLLVAAVLPCSATLPGGLGTGLAMTAVLVCTNLAGAILRPI 100 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 +RIP Y++ A++++A +++ A GL +F+ N ++ R AF+ + Sbjct: 101 ASPALRIPCYLIAAAAILTAAGLVLQACFPGLTGCAPLFLLPAAVNAALLARRGAFSRRF 160 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 P +A+DG + G+G T A+ VL +LRE++G GTL+ A + P Sbjct: 161 TPGYAAVDGLAAGVGFTIALTVLSALRELLGKGTLWGAA--------------LPGELPP 206 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKR 213 LLA P G F+ L + A R+++R Sbjct: 207 VLLAAAPCGGFLLLSCLAALVRWASARLERR 237 >UniRef50_C1DEF3 Electron transport complex protein rnfA n=60 Tax=Bacteria RepID=RNFA_AZOVD Length = 194 Score = 133 bits (335), Expect = 5e-30, Method: Composition-based stats. Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 7/160 (4%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E+ ++V + NN LVQ LGLCP + V+ A+GL LATT VLTL + L+ Sbjct: 1 MTELVLILVGAILVNNFVLVQFLGLCPFMGVSKRIETAIGLALATTFVLTLAAMCSYLLQ 60 Query: 61 HWT-----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + +R ++++IA VV +ML+N + LY+ LGIF+PLI TNCIV+G A Sbjct: 61 RYVLVPLDLEYLRTIGFILVIAVVVQFTEMLVNKTSPLLYRVLGIFLPLITTNCIVLGVA 120 Query: 116 EAFAAKKGPAL--SALDGFSIGMGATCAMFVLGSLREIIG 153 A K G S ++GF G+G + + + ++RE I Sbjct: 121 LLNANKAGYGFLESGINGFGAGLGFSLVLVLFAAMRERIA 160 >UniRef50_B7UWJ4 Electron transport complex protein rnfA n=85 Tax=Bacteria RepID=RNFA_PSEA8 Length = 194 Score = 132 bits (333), Expect = 7e-30, Method: Composition-based stats. Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 7/160 (4%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E+ ++V + NN LVQ LGLCP + V+ A+GL LATT VLTL + L+ Sbjct: 1 MTELALILVSAILVNNFVLVQFLGLCPFMGVSRKIETAIGLSLATTFVLTLAAMCSHILQ 60 Query: 61 HWTP-----AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + +R ++++IA VV +ML+ + LY+ LGIF+PLI TNCIV+G A Sbjct: 61 RYVLRPLDLEYLRTIGFILVIAVVVQFTEMLVKKTSPLLYRVLGIFLPLITTNCIVLGVA 120 Query: 116 EAFAAK--KGPALSALDGFSIGMGATCAMFVLGSLREIIG 153 A K G + GF G+G + + + +LRE I Sbjct: 121 LLNANKAEYGFLQATTQGFGAGLGFSLVLVLFAALRERIA 160 >UniRef50_D2RN92 Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Acidaminococcus RepID=D2RN92_ACIFE Length = 191 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 78/158 (49%), Gaps = 6/158 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M ++ ++ +N L + LG+C L V+ N++G+ A + V+ L+ + Sbjct: 1 MHSTFGILFSSIFVSNIILSRFLGMCSFLGVSKNFKNSVGMSAAVSFVMLLSTMLSYACY 60 Query: 61 H-----WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 H + ++ ++++ IA++V V+M + L++++GI++PLI TNC ++G A Sbjct: 61 HLLLVPYHLEYLKTLVFILAIATLVQLVEMFMKKAMPSLHKAMGIYLPLITTNCAILGIA 120 Query: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREII 152 L S ++ +G T A+ + +RE + Sbjct: 121 LINVESNYSFLDSCVNSIGTSIGYTMAILLFSCIRERL 158 >UniRef50_A7FHZ1 Electron transport complex protein rnfA n=360 Tax=Bacteria RepID=RNFA_YERP3 Length = 193 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 6/159 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E + V + NN LV+ LGLCP + V+ A+G+GLATT VLTL ++ + Sbjct: 1 MTEYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASVCAWMVN 60 Query: 61 HWTPA-----EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + +R ++++IA VV ++++ + LY+ LGIF+PLI TNC V+G A Sbjct: 61 SFILLPLGLIYLRTLAFILVIAVVVQFTELVVRKTSPTLYRLLGIFLPLITTNCAVLGVA 120 Query: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREIIG 153 + + SA+ GFS G + M + ++RE + Sbjct: 121 LLNVNQSHNFMQSAVYGFSAAAGFSLVMVLFAAIRERLA 159 >UniRef50_B8CY11 Electron transport complex, RnfABCDGE type, A subunit n=17 Tax=Bacteria RepID=B8CY11_HALOH Length = 197 Score = 129 bits (324), Expect = 9e-29, Method: Composition-based stats. Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 6/157 (3%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + I + + + NN LV+ LG+CP L V+ A +GLATT V+T+T + Sbjct: 6 TRILLIFISTVLVNNFILVRFLGICPFLGVSRHVETAFSMGLATTFVMTMTGAATWLINT 65 Query: 62 WTPAEIRIPI-----YVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAE 116 + +P ++++IAS+V V+M I + LY++LGI++PLI TNC ++G A Sbjct: 66 YILEMFNLPFLQYVSFIIVIASLVQFVEMFIKKTSPVLYKALGIYLPLITTNCAILGLAL 125 Query: 117 AFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREII 152 + S + G S G+G T A+ ++ LRE + Sbjct: 126 LIPLNGYNFIESIVFGLSAGVGFTLAIVLMAGLRETL 162 >UniRef50_A8ZY02 Electron transport complex, RnfABCDGE type, A subunit n=3 Tax=Bacteria RepID=A8ZY02_DESOH Length = 191 Score = 126 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 6/163 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIS--- 57 M+E + + + NN L Q LG CP L + A+G+ +A VL + + Sbjct: 1 MTEYILLAISCILINNILLAQFLGNCPFLGTSKKMETAVGMSMAVVFVLVMAGMITWCVD 60 Query: 58 --TLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 L+ +R ++++IAS+V V+M + LY LGIF+PLI TNC V+G Sbjct: 61 VFLLKWLDLEFLRTLAFILVIASLVQFVEMFLKKSIPALYAGLGIFLPLITTNCAVMGAC 120 Query: 116 EAFAAKKGPALSALDG-FSIGMGATCAMFVLGSLREIIGNGTL 157 ++ L AL FS +G A+ + +RE I G + Sbjct: 121 LINIKEEYNFLQALVASFSYAVGFGLALILFAGVRERINLGKV 163 >UniRef50_C5SAZ5 Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Gammaproteobacteria RepID=C5SAZ5_CHRVI Length = 196 Score = 125 bits (315), Expect = 9e-28, Method: Composition-based stats. Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 5/155 (3%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTI----STL 59 + + + NN L LG+CP L V+ A +GLAT V+ +++ L Sbjct: 6 LSLIFLNAAIVNNFVLALFLGICPFLGVSGKKETAWNMGLATMFVMLVSSAAAYGINWLL 65 Query: 60 RHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFA 119 +R+ Y+ +IAS V V+M + + L++SLGIF+PLI TNC ++G A Sbjct: 66 TQLGLEFLRLICYIAVIASAVQLVEMFVKKTSPALFRSLGIFLPLITTNCAILGLALFQT 125 Query: 120 AKKGPAL-SALDGFSIGMGATCAMFVLGSLREIIG 153 +K+ + S + G+G T A+ ++ LRE + Sbjct: 126 SKEYDFVQSLVYALGAGVGFTLALMLMAGLREKLA 160 >UniRef50_A6L724 Na+-transporting NADH:ubiquinone oxidoreductase, electron transport complex protein rnfA n=18 Tax=Bacteria RepID=A6L724_BACV8 Length = 200 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 6/156 (3%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 E + + ++ NN L Q LG+CP L V+ A G+G A VLT+ + ++ + Sbjct: 2 EYILIFITAIFVNNIVLSQFLGICPFLGVSKKVETATGMGAAVAFVLTIATIVTYLIQKF 61 Query: 63 TPA-----EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEA 117 ++ ++++IA++V V++++ + LYQ+LG+F+PLI TNC ++G A Sbjct: 62 VLDAFGLEYLQTIAFILVIAALVQMVEIILKKVSPALYQALGVFLPLITTNCCILGVAIL 121 Query: 118 FAAKKGPALS-ALDGFSIGMGATCAMFVLGSLREII 152 K L+ + FS +G AM + +RE + Sbjct: 122 VIQKDFDLLTGVVYAFSTALGFALAMVLFAGIREQL 157 >UniRef50_B0MP92 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP92_9FIRM Length = 256 Score = 124 bits (311), Expect = 2e-27, Method: Composition-based stats. Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 16/214 (7%) Query: 8 IVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEI 67 ++ GL K N L+ + P++ +T + + LA ++ LT +T S + + Sbjct: 23 LIDGLAKQNVVLMTGIVNAPVIIAATTFKKGVVIALAFAIISFLTIVTCSFVPKKIVYTL 82 Query: 68 RIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALS 127 R+ IY ++ + +L+ + +GI++PLI+TN ++ + E+ + Sbjct: 83 RVIIYALVGSVYYIPTVLLLEQIFPLTVELIGIYMPLIITNALIFSKTESRFYLEDKLKM 142 Query: 128 ALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAM 187 +D G + G RE+I GT + K+ +I +SPF Sbjct: 143 IIDVIFFIAGFGAVCVLTGGFRELICFGTF---------AGIKLFDFKIAAFESPF---- 189 Query: 188 LPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAER 221 G FI +G+M + ++ RR +E Sbjct: 190 ---GGFILVGIMAGMFRALYNYLRNRRIRLNSEE 220 >UniRef50_A6DRQ4 Na(+)-translocating NADH-quinone reductase subunit E n=3 Tax=Bacteria RepID=A6DRQ4_9BACT Length = 245 Score = 123 bits (310), Expect = 4e-27, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW- 62 + ++ ++ ++ N LG+C LAV+ ++G+G A V T+T + ++ Sbjct: 1 MLELALKAIFIENMIFALFLGMCSYLAVSKKVDTSVGMGCAVWFVTTVTCPASWLVSNYF 60 Query: 63 ------------------TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPL 104 + Y+ +IA++V ++M I + LY SLG+F+PL Sbjct: 61 LKPGEQNLIGQLFNKPDLDLTFLTFVSYIALIAAMVQFLEMFIEKISAKLYGSLGVFLPL 120 Query: 105 IVTNCIVVGRAEAFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLRE 150 I NC ++G + K +A+ GFS G G A+ V ++RE Sbjct: 121 IAVNCAILGGSLMMNDKGFTFPEAAMFGFSGGFGWLMAIVVFAAIRE 167 >UniRef50_C8WMP5 Electron transport complex, RnfABCDGE type, A subunit n=30 Tax=Bacteria RepID=C8WMP5_EGGLE Length = 197 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 77/154 (50%), Gaps = 5/154 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E ++ + NN LV+ LG+CP L V+ +A G+G A T+V+ L L+ Sbjct: 1 MAEYAAILFSMILVNNYVLVKFLGICPFLGVSKKLDSAAGMGCAVTVVMVLATAVTWPLQ 60 Query: 61 HWT----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA- 115 ++ ++++IA +V ++++I + L+++LG+++PLI TNC V+G Sbjct: 61 QLLNALGLGYLQTIAFILVIAVLVQMLEIVIRYFLPALHEALGVYLPLITTNCAVLGVTI 120 Query: 116 EAFAAKKGPALSALDGFSIGMGATCAMFVLGSLR 149 A + + G+G AM + +R Sbjct: 121 LAVDEGYNYPEALVAALGAGLGFLLAMVLFSGVR 154 >UniRef50_D2MN21 Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Bulleidia extructa W1219 RepID=D2MN21_9FIRM Length = 190 Score = 120 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 43/156 (27%), Positives = 85/156 (54%), Gaps = 6/156 (3%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ +++ GL+ NN L + LG+CP + V++ +ALG+G+A V+ +++ T+ H+ Sbjct: 2 DLFTLLIGGLFINNIILTKFLGMCPFMGVSTKLESALGMGVAVIFVIFGSSVIAWTIYHY 61 Query: 63 TPAEIRI-----PIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEA 117 I ++++IA+ V V++ I LY+SLGI++PLI TNC V+ A+ Sbjct: 62 VLVPFHIEYMELITFILLIAAFVQFVELFIKKSTPALYKSLGIYLPLITTNCAVLFVAQD 121 Query: 118 FAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREII 152 A+ + + ++ +I G + + S+R + Sbjct: 122 NIAQGYDLVHTMVNSIAIPAGFALMLLIFASIRTRL 157 >UniRef50_A7HKQ4 RnfA-Nqr electron transport subunit n=8 Tax=Bacteria RepID=A7HKQ4_FERNB Length = 197 Score = 120 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 45/149 (30%), Positives = 79/149 (53%), Gaps = 6/149 (4%) Query: 7 VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT--- 63 + ++ +N L LG+C ++++ ++ GLGLA TLV+T+T + + Sbjct: 10 LFFASIFTSNILLTNFLGMCSFISISKDIKSSNGLGLAVTLVMTITTAINWIIEKYVIAP 69 Query: 64 --PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 +R +Y+++IA+VV ++M+I+ + LY LGIF+PLI NC ++G A + Sbjct: 70 LDLGYLRYILYIIVIAAVVQVLEMIIDRVSPNLYMVLGIFLPLITVNCAILGVALFMQLR 129 Query: 122 KGPAL-SALDGFSIGMGATCAMFVLGSLR 149 L S G GMG A+ +L ++R Sbjct: 130 NYTFLQSVFFGLGSGMGWWLAIVLLAAIR 158 >UniRef50_Q2LXT8 Sodium-translocating NADH-quinone reductase subunit E n=3 Tax=Deltaproteobacteria RepID=Q2LXT8_SYNAS Length = 323 Score = 120 bits (300), Expect = 6e-26, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 76/155 (49%), Gaps = 6/155 (3%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 + +++ + NN + LGLC + + A+G+G+ T+V+ ++ + L + Sbjct: 134 LFSILIGAMLINNYVFTKYLGLCVFIGTSRKKDTAVGMGITFTIVMVVSAMISWFLYQYV 193 Query: 64 PA-----EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 +++ +++ +++ V AV ++ L+++ G+++ L++ NC+++ Sbjct: 194 LKPYRLDYLQVVVFIGLVSLTVQAVDTVLRKVNPALFKAFGVYLVLVIANCVIIAVPLTL 253 Query: 119 AAKKGPAL-SALDGFSIGMGATCAMFVLGSLREII 152 A+ + A S + G G A+F++ + RE + Sbjct: 254 ASNEYNAFESFMLALGAGGGFLLALFLMSASRERL 288 >UniRef50_A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase subunit E n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU9_ACHLI Length = 194 Score = 119 bits (299), Expect = 8e-26, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 87/153 (56%), Gaps = 5/153 (3%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 E+ ++ + + NN AL+ +LG+C L+AV+++ N++ +G+A V+T+T + + Sbjct: 2 ELIELFLASILSNNIALIFILGMCSLIAVSTSIKNSVNMGVAVIFVVTITAIINWPIYEL 61 Query: 63 T----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 ++ + +++++IA+ V ++M + Y +Y+S GIF+PLI NCIV+ + F Sbjct: 62 LKATGTEQLALLVFIIVIAAFVQFLEMFLAKYFPKIYESFGIFLPLITVNCIVLSVSLFF 121 Query: 119 AAKKGPAL-SALDGFSIGMGATCAMFVLGSLRE 150 + L + + F +G T AM +L +R+ Sbjct: 122 QQRNYDFLQTTVFAFGSSVGWTFAMILLAGVRQ 154 >UniRef50_Q3KM81 Na(+)-translocating NADH-quinone reductase subunit E n=40 Tax=Bacteria RepID=NQRE_CHLTA Length = 244 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 18/169 (10%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + + +Q + N L LG+C LA +S + A GLG++ LVLT+T + ++ Sbjct: 10 NLLGIFLQATFIQNILLSTFLGMCSYLACSSRLSTANGLGMSVALVLTITGSINWLVHYF 69 Query: 63 T-----------------PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLI 105 + + + +++++IA+ +++L+ ++ LY +LGIF+PLI Sbjct: 70 ITKPGALAWLSPALANIDLSFLELIMFIVVIAAFTQILEVLLERFSRNLYLALGIFLPLI 129 Query: 106 VTNCIVVGRAEAFAAKKGPALS-ALDGFSIGMGATCAMFVLGSLREIIG 153 NC ++G + P L + G G A+ + ++RE + Sbjct: 130 AVNCAILGGVLFGITRNYPFLPMVVFSLGSGCGWWLAIVLFATIREKLA 178 >UniRef50_A1WT44 RnfA-Nqr electron transport subunit n=13 Tax=Bacteria RepID=A1WT44_HALHL Length = 193 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 5/149 (3%) Query: 7 VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIS----TLRHW 62 + + NN L LG+CP+L V+ A +G+A+ V+ + +L L ++ Sbjct: 9 IFLNAAIINNFVLALFLGICPILGVSGKLGTAFPMGVASAFVMLIASLAAYGINIVLGYF 68 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 + + Y+ +IAS V V+M + ++ LY++LGIF+PLI TNC ++G A + + Sbjct: 69 ELEFLSLIAYIAVIASAVQLVEMFVKKFSPPLYRALGIFLPLITTNCAILGVALFQTSYE 128 Query: 123 GPAL-SALDGFSIGMGATCAMFVLGSLRE 150 L S G G A+ ++ LRE Sbjct: 129 YNFLQSLTYSLGAGAGFILAIVLMAGLRE 157 >UniRef50_A6LW81 RnfA-Nqr electron transport subunit n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW81_CLOB8 Length = 191 Score = 116 bits (290), Expect = 8e-25, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 6/158 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M E + + L NN L + +GLC V+ + ++G+G+A T V+TL+++ + Sbjct: 1 MREYFTLFIGALLVNNFVLTKFVGLCIFFGVSKSLDASIGMGMAVTSVITLSSMLAWVVY 60 Query: 61 HWT-----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 ++ + ++V++IAS V ++++I A LY GI++ LI TNCIV+ Sbjct: 61 NFVLLPYHLTFLTTIVFVILIASFVQLLELIIKKQAPTLYSMWGIYLLLIATNCIVLSVP 120 Query: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREII 152 + S + GMG A+ ++ SLRE + Sbjct: 121 LLSVESNYSFVKSVVFSIGSGMGFALALVLMASLREKL 158 >UniRef50_B5YE59 Na(+)-translocating NADH-quinone reductase subunit d n=3 Tax=Bacteria RepID=B5YE59_DICT6 Length = 195 Score = 116 bits (290), Expect = 8e-25, Method: Composition-based stats. Identities = 36/156 (23%), Positives = 82/156 (52%), Gaps = 6/156 (3%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ + + NN ++ L LCP + +++ ++G+G A T V+ + ++ + ++ Sbjct: 6 KLFMLFISASLINNIVFMRFLALCPFVGMSTQIETSIGMGAAVTFVMVMASVVTFFIYYY 65 Query: 63 TP-----AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEA 117 +R ++++IA +V V+M+I + GLY+++GI++PLI TNC ++G Sbjct: 66 ILVPLNLLFLRTIAFILVIAVLVQLVEMVIKRFLSGLYKAMGIYLPLITTNCAILGVTLL 125 Query: 118 FAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREII 152 + + + + +G T A+ +L S+R+ + Sbjct: 126 NINYGHNLIEAIVYSLGVSLGFTIALILLASIRDRL 161 >UniRef50_Q73PG5 Na(+)-translocating NADH-quinone reductase, E subunit n=1 Tax=Treponema denticola RepID=Q73PG5_TREDE Length = 190 Score = 113 bits (282), Expect = 6e-24, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 5/157 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M E + + + N L++ L LCP + ++S ++G+G A V L + Sbjct: 1 MPETLSIFLSAILVKNVVLMRFLALCPFIGMSSDVKKSVGMGWAVLFVTLLATAVTYPIY 60 Query: 61 HWT----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA- 115 ++ ++ I++++IAS+V V+ + A LY S+G+++ LI TNC ++ Sbjct: 61 NYVLIGNLEFLQTLIFILVIASLVQLVEFYLKKAAPALYSSMGVYLALITTNCAILAVTI 120 Query: 116 EAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREII 152 +A + + G ++ +L LR+ I Sbjct: 121 DAIDEGYTFVQALVHAAGSAFGFMISLLLLAGLRQRI 157 >UniRef50_Q9ZC45 Na(+)-translocating NADH-quinone reductase subunit E n=23 Tax=Proteobacteria RepID=NQRE_YERPE Length = 199 Score = 112 bits (281), Expect = 7e-24, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 72/161 (44%), Gaps = 12/161 (7%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + ++ ++ N AL LG+C LA++ A GLGL T +L + + + Sbjct: 3 ESYLTIFIRAVFVENMALNFFLGMCTFLAISKKVETAFGLGLTVTALLAIATPLNNLIYT 62 Query: 62 WTPAE-----------IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCI 110 + E + ++ ++A++V ++M++ + L+ +LG F+PL+ +C Sbjct: 63 YILRENALIDGVDLSFLDFITFIGVLAALVQILEMVLERFLPSLHHTLGAFLPLLTIHCA 122 Query: 111 VVGRAEAFAAKKGPA-LSALDGFSIGMGATCAMFVLGSLRE 150 + G ++ S + G G+G A+ + LRE Sbjct: 123 IFGATIFMVQREYTFTESFVYGTGCGLGWMLAIISMAGLRE 163 >UniRef50_Q12W81 Electron transport complex protein rnfA n=2 Tax=Methanosarcinaceae RepID=Q12W81_METBU Length = 196 Score = 112 bits (281), Expect = 8e-24, Method: Composition-based stats. Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 6/154 (3%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + + + G++ N ++Q LGLC + VT +A G+ A V+TL + ++ Sbjct: 6 SLFQIFMDGVFIKNFLIIQFLGLCSFVGVTKDTKSAAGMSGAVIFVMTLAATVSFLIYNF 65 Query: 63 TPAEIRI-----PIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEA 117 +++ ++++IA++V V+ ++ LY+SLGI++PLI TNC V+G Sbjct: 66 VLVPLKLEFLDLISFIVVIAALVQLVEFVVRKNVPSLYRSLGIYLPLITTNCAVLGVVLL 125 Query: 118 FAAKKGPAL-SALDGFSIGMGATCAMFVLGSLRE 150 + + S + G S G+G M ++ +RE Sbjct: 126 NVLNEYSFIQSVVFGVSAGIGYALVMLMMSGIRE 159 >UniRef50_A8S6D1 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D1_9FIRM Length = 241 Score = 112 bits (281), Expect = 8e-24, Method: Composition-based stats. Identities = 57/221 (25%), Positives = 92/221 (41%), Gaps = 31/221 (14%) Query: 12 LWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIP- 70 ++ NN ++Q +GL PL+ V +T N L L A TL+L + + L P P Sbjct: 22 VFLNNPVVMQGMGLAPLVVVATTGQNGLMLAAAVTLLLVPSRVLACLLSRLVPLRDEEPT 81 Query: 71 -------------IYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEA 117 +Y A V A ++N +LGI++P++V ++ R Sbjct: 82 PEQLQKKLLPRALLYAASAAVVYLAAYPILNFVFGTGLLNLGIYLPMLVVEPLLTYRFGR 141 Query: 118 FAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIF 177 A+S G I +G + V+G +RE + GT+F A +G WA + Sbjct: 142 VQETVHKAVS--KGVRITVGYALLLLVVGVVREWLSLGTVFG---APVGRWALL------ 190 Query: 178 HTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAA 218 LA +P G FI LG++ A + K+ + A Sbjct: 191 ------PLAKMPAGGFIVLGILCAIWRAAAAKRKEYLKKEA 225 >UniRef50_A8ZSV6 RnfA-Nqr electron transport subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSV6_DESOH Length = 255 Score = 111 bits (279), Expect = 2e-23, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 75/189 (39%), Gaps = 37/189 (19%) Query: 1 MSEIKDVIVQGL---WKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIS 57 M+ I D+ + + NN L +G+CP + V+ + A G+G A T V+T+ Sbjct: 1 MNYIIDIFLIAMSAALINNFVLYYFVGICPFIGVSRNISMAFGMGCAVTFVITIAAFISW 60 Query: 58 TLRHWTPAE-------------------------IRIPIYVMIIASVVSAVQMLINAYAF 92 + + + +Y+ I+S V V+M + + Sbjct: 61 AITTFVLIPGAPLTAFVAGFFLPGEQAAAVDLTILSYIVYIFAISSSVQFVEMYVRKFFP 120 Query: 93 GLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP---------ALSALDGFSIGMGATCAMF 143 LY+S G+F+PLI TNC ++ + + + G+G T A+ Sbjct: 121 PLYKSFGVFLPLITTNCAILFACLTIMSNVAVDNPAEAWDLGRALVLAIFGGVGFTIAIV 180 Query: 144 VLGSLREII 152 ++ +RE + Sbjct: 181 IMAGIREEL 189 >UniRef50_C0QFQ8 RnfA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFQ8_DESAH Length = 259 Score = 111 bits (277), Expect = 2e-23, Method: Composition-based stats. Identities = 42/183 (22%), Positives = 70/183 (38%), Gaps = 35/183 (19%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 +I + + NN L +G+CP + V+ A G+G A T V+T+ T+ Sbjct: 6 DIILIALSAALINNFVLYYFVGICPFIGVSRRVDMAFGMGCAVTFVITIAAFLSWTITTM 65 Query: 63 TPAE-------------------------IRIPIYVMIIASVVSAVQMLINAYAFGLYQS 97 + +Y+ IAS V V+M + + LY+S Sbjct: 66 VLIPGAPLSSFVAGFFLSKEAASTIDLTVLSYIVYIFSIASSVQFVEMYVRKFFPILYKS 125 Query: 98 LGIFIPLIVTNCIVVGRAEAFAAKK----------GPALSALDGFSIGMGATCAMFVLGS 147 G+F+PLI TNC ++ + S F G+G T A+ ++ Sbjct: 126 FGVFLPLITTNCAILFACLTIMSNVVGVENPADAWDLWHSLTLAFFGGVGFTIAIVIMSG 185 Query: 148 LRE 150 +RE Sbjct: 186 IRE 188 >UniRef50_C8R0U7 NADH:ubiquinone oxidoreductase, subunit E n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0U7_9DELT Length = 203 Score = 109 bits (272), Expect = 1e-22, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 16/166 (9%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ L+ N L LG+C LA++ A GLGLA ++ +T + + + Sbjct: 4 HYFEIFFTALFVENLVLTFFLGMCTFLAISRQVKTAFGLGLAVVIIQAITVPLNNLIYNL 63 Query: 63 TP---------------AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVT 107 + + +Y+ +IA+ V ++M ++ Y LY +LGIF+PL+ Sbjct: 64 VLQPGALGWLGLADIDLTFLGLLVYIGVIAATVQILEMFLDRYVPALYNTLGIFLPLLTV 123 Query: 108 NCIVVGRAEAFAAKKG-PALSALDGFSIGMGATCAMFVLGSLREII 152 NC ++G + + S G G G A+ +L +RE + Sbjct: 124 NCAILGASLFMVERDYALGESVAYGLGAGGGFLIAVVLLAGIREKL 169 >UniRef50_Q487D7 Na(+)-translocating NADH-quinone reductase subunit E n=345 Tax=Bacteria RepID=NQRE_COLP3 Length = 207 Score = 108 bits (269), Expect = 2e-22, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 21/171 (12%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M + ++ ++ N AL LG+C LAV+ + A+GLG+A +VL L + Sbjct: 1 MEHYLSIFIKTIFIENMALSFFLGMCTFLAVSKKVSTAIGLGVAVVVVLGLAVPANQIIY 60 Query: 61 HWTP--------------------AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGI 100 + + ++ +IA++V ++ML++ Y LYQ+LGI Sbjct: 61 QAILAPGALDSLMGITDPKESIDLSFLSFITFIGVIAALVQILEMLLDKYFPALYQALGI 120 Query: 101 FIPLIVTNCIVVGRAEAFAAKK-GPALSALDGFSIGMGATCAMFVLGSLRE 150 F+PLI NC + G AK S + G G+G A+ ++ LRE Sbjct: 121 FLPLITVNCAIFGAVSFMVAKNLTLGESVVYGVGSGIGWMLAIVLMAGLRE 171 >UniRef50_Q3K7K5 Putative electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3K7K5_PSEPF Length = 193 Score = 97.3 bits (241), Expect = 4e-19, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 14/181 (7%) Query: 28 LLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLI 87 L+ T + AL L +V+ + L ++ LR +E +P+ +++ A++ + + Sbjct: 16 LIGATDSVAGALATLLMFAVVVGVYGLCMTPLRSRLSSESLLPVSLILAATLAGCADIFL 75 Query: 88 NAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGS 147 A +Q + ++ LI C+V+ F L T M VL Sbjct: 76 QRVAMQWHQLISLYAGLIGLQCVVLEHNGFFRRPVRNRLKLCGL------FTALMIVLAV 129 Query: 148 LREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLID 207 LRE+IG G++ L W ++ A L PGAFI LGL+LA + Sbjct: 130 LRELIGQGSI---GHHLSEHWQGLILF-----GDGLHFATLAPGAFILLGLLLAARQAWT 181 Query: 208 E 208 Sbjct: 182 R 182 >UniRef50_C0EE36 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE36_9CLOT Length = 203 Score = 91.1 bits (225), Expect = 3e-17, Method: Composition-based stats. Identities = 45/205 (21%), Positives = 90/205 (43%), Gaps = 16/205 (7%) Query: 9 VQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIR 68 ++ L N L + L + P++ + NA L LA ++ +T + S + P +R Sbjct: 11 LKDLLYANMVLERGLLVAPVVVMAYNLKNAAALALAFAIITFVTVVFASFIPKKIPYAVR 70 Query: 69 IPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALS- 127 + V++ A + + ++ GL LGIF+PL++TN +V+ ++E K Sbjct: 71 VIFNVVVAALMFIPAALAVDQIQPGLVYKLGIFLPLLITNSLVIQKSETRFRKIPTKRGM 130 Query: 128 ALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAM 187 +D +G + ++G+LRE+ G+ TL+ A + + Sbjct: 131 IIDLIGHIIGFAIVICLVGALRELFGSATLWGKA---------------IGSFQTAPALL 175 Query: 188 LPPGAFIGLGLMLAGKYLIDERMKK 212 LP F+ +G++ A + R ++ Sbjct: 176 LPFSGFLLIGMLAALVNWLKARRER 200 >UniRef50_UPI0001699AE2 RnfA-Nqr electron transport subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699AE2 Length = 156 Score = 90.4 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Query: 7 VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP-- 64 + + + NN L LGLCP L V+ AL +GLAT V+ ++++ + Sbjct: 9 IFLNAVLANNFVLALFLGLCPFLGVSGKLDTALPMGLATMFVMLVSSVCAFAINQILVTF 68 Query: 65 --AEIRIPIYVMIIASVVSAVQMLINAYAFG 93 +R+ Y+ +IAS V V+M + + G Sbjct: 69 DIEFLRLIAYIAVIASAVQLVEMTLKKFTPG 99 >UniRef50_Q1Q255 Similar to Na(+)-translocating NADH-quinone reductasesubunit E n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q255_9BACT Length = 472 Score = 89.2 bits (220), Expect = 1e-16, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 19/165 (11%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH-- 61 +++ L+ + L +LLG+CPLL + A +G+A +V+TL+ + + Sbjct: 271 FLPILLNALFFDGIVLSKLLGICPLLNKSRQIDAAWKMGIAVIIVMTLSTALNWVVYNKV 330 Query: 62 ----------WTPAEIRIP------IYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLI 105 ++ IR+ ++++ IA V + +++ +A Y+ +G F+ LI Sbjct: 331 LIMGSDVLAKYSSMSIRLEKIFYLTVFIVTIAVFVQTLSVMLRKFARTAYEQMGQFLELI 390 Query: 106 VTNCIVVGRAEA-FAAKKGPALSALDGFSIGMGATCAMFVLGSLR 149 NCIV+ A +S + F G+ L LR Sbjct: 391 TVNCIVLASATFTIPTGTSFMVSTITAFGYGLHWLMVTVWLALLR 435 Score = 84.2 bits (207), Expect = 4e-15, Method: Composition-based stats. Identities = 50/217 (23%), Positives = 83/217 (38%), Gaps = 20/217 (9%) Query: 13 WKNNSALVQL--LGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT---PAEI 67 ++N L LG C LAVT+ N+L +GL V + I R + Sbjct: 16 LRDNLILTAGAGLGFCSALAVTNKLENSLTMGLGVLFVAMGSFSLIYPFRRLITIAGSHH 75 Query: 68 RIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALS 127 +I + ++I++ V+ A+ + S+ +I LI TNCIV+ + + Sbjct: 76 KISLLMIIVSVFVTIFAFFAQAFVPEVAASIRAYIDLITTNCIVLAVI-SEGLTVPFWEA 134 Query: 128 ALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAM 187 MG A+ +L LRE +G GT+ + T +L + Sbjct: 135 QKKILKACMGYAFALILLAFLREPLGFGTIMGFSVIP-------------ETFPRVVLMI 181 Query: 188 LPPGAFIGL-GLMLAGKYLIDERMKKRRAEAAAERAL 223 P G F L G L + + + + A+ E A Sbjct: 182 TPVGGFFALAGFRLMMRPFLLKARIVYQEAASCECAA 218 >UniRef50_A4MZD9 Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MZD9_HAEIN Length = 128 Score = 88.4 bits (218), Expect = 2e-16, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ +I+ NN LV+ LGLCP + V+ A+G+GLAT VLT+ +L + Sbjct: 1 MTHYILLIIGTALINNFVLVKFLGLCPFMGVSKKIETAVGMGLATMFVLTVASLCAYLVD 60 Query: 61 HWTP-----AEIRIPIYVMIIASVVSAVQMLINA 89 H+ +R +++++IA VV +M IN Sbjct: 61 HYILIPLNATFLRTLVFILVIAVVVQFTEMAINK 94 >UniRef50_UPI0000397FA3 COG4657: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA n=1 Tax=Actinobacillus pleuropneumoniae serovar 1 str. 4074 RepID=UPI0000397FA3 Length = 181 Score = 85.0 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 6/114 (5%) Query: 38 ALGLGLATTLVLTLTNLTISTLRHWTP-----AEIRIPIYVMIIASVVSAVQMLINAYAF 92 A+G+G+ATT VLT+ +L+ + + +R +++++IA +V +M+++ + Sbjct: 1 AIGMGMATTFVLTVASLSAYLVETYVLIPLEAQFLRTLVFILVIAVIVQLTEMIVHKTSP 60 Query: 93 GLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPAL-SALDGFSIGMGATCAMFVL 145 LY+ LGI++PLI TNC V+G A + S L GF +G + + + Sbjct: 61 TLYRLLGIYLPLITTNCAVLGVALLNVNLSNNLVESVLYGFGAALGFSLVLVLF 114 >UniRef50_UPI0001C372EE electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372EE Length = 204 Score = 81.9 bits (201), Expect = 2e-14, Method: Composition-based stats. Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 15/219 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ K+ + G+ +N L L+ + P++ + NAL L A + ++ + S + Sbjct: 1 MNNRKNSVFDGILGDNIILSSLMVISPIIICGDSVKNALSLIYAFNSMTFISLIIGSFVP 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 P IRI IY +I + V V+ + +GI+ PL+ N ++V ++EA Sbjct: 61 KKIPYTIRIIIYAIISSLVFIPVRWFAVEFYPDSIHRIGIYYPLLAVNSLIVLQSEAKFY 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 + + +G M G++RE GT+ ++ + Sbjct: 121 RMKKGRMIISLVFYIIGFDLVMLFTGAVREFFAYGTILS---------------KVADIN 165 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAA 219 + +P G FI LGLM I + +AE+ Sbjct: 166 TTVSGLGMPFGGFIFLGLMCGVYRKIRSSVHSTKAESEE 204 >UniRef50_Q4K753 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K753_PSEF5 Length = 187 Score = 76.9 bits (188), Expect = 5e-13, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 9/188 (4%) Query: 27 PLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQML 86 PL+ T + A+GL LA L++ L + LR A +++ AS+ S + + Sbjct: 4 PLIGATDSWVKAIGLALAWVLLIGLYGAGMRLLRPPIEARHHWLASLLLSASLGSCLWLA 63 Query: 87 INAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLG 146 + A+++ L+Q L +++ L+ C+V+ +A F + L+ A+ LG Sbjct: 64 LQAWSYELHQQLSLYLGLLPLQCVVLEQAGFFQHRNRLRLAGA--------FCVALIGLG 115 Query: 147 SLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLI 206 +LRE++G GTL L+G + L L PG FI LG +LA K Sbjct: 116 ALRELLGAGTLGSHLGWLVGQPDAGSGWVVLPHG-GLHLLTLAPGGFILLGALLAAKRAW 174 Query: 207 DERMKKRR 214 R Sbjct: 175 AGPWTLNR 182 >UniRef50_A7C280 RnfA-Nqr electron transport subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C280_9GAMM Length = 94 Score = 75.0 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 S++ + + L NN LGLCP V+ A LGLA+T V+ +T + L Sbjct: 3 SQLLWIFISALLVNNFVFSYFLGLCPFFGVSGKLETAFRLGLASTFVMLITAICTWFLNT 62 Query: 62 WTP---AEIRIPIYVMIIASVVSAVQMLINAY 90 + +R+ ++++IAS V V+M+I Sbjct: 63 YILIYAPYLRLISFIVVIASTVQFVEMVIKKI 94 >UniRef50_B0P6D1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6D1_9FIRM Length = 191 Score = 64.2 bits (155), Expect = 4e-09, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 1/133 (0%) Query: 28 LLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLI 87 + +T++ N++ + + L T L S P +Y + +++ A LI Sbjct: 6 AVVITTSLKNSVSISILLACSLVPTVLLASLAGARLPRWGAPILYTLFSLALIVACVPLI 65 Query: 88 NAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFA-AKKGPALSALDGFSIGMGATCAMFVLG 146 + + SLGIF+PL+ N +++ +A +++ P + +D S G M +L Sbjct: 66 LPISPEVADSLGIFVPLLSVNTLLLTLCGRYADSRRKPVFALVDAVSYSAGFALIMCLLA 125 Query: 147 SLREIIGNGTLFD 159 LRE +G G ++ Sbjct: 126 LLREWLGTGNIWG 138 >UniRef50_A9NEB4 NADH oxidoreductase complex RnfABCDGE type, E subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEB4_ACHLI Length = 192 Score = 58.4 bits (140), Expect = 2e-07, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 14/193 (7%) Query: 14 KNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYV 73 KNN LL + PL+ + +T AL +GL ++ + + ++ +R Y+ Sbjct: 3 KNNLKPFILLSILPLIYLANTLETALFMGLVYVVLALIIYAGGLLINKFSEGRMRSYAYI 62 Query: 74 MIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFS 133 ++ AS+V+ + ++ Y L Q +GI++ L I R E K GF Sbjct: 63 LLTASIVTIIMTVLGTYF-SLNQLMGIYLAL-TIFTIPQLRLETVEEKS----IVDHGFM 116 Query: 134 IGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAF 193 I +G A+ ++G LRE +G G++ A + V++F + G F Sbjct: 117 ILVGF-VALILIGFLREFLGTGSISLLA-------FGLDTVQVFDAKFGIAILKDNSGGF 168 Query: 194 IGLGLMLAGKYLI 206 I G + A I Sbjct: 169 ILAGFIFAIINAI 181 >UniRef50_B6G8I1 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G8I1_9ACTN Length = 220 Score = 50.7 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 7/147 (4%) Query: 17 SALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMII 76 + + G P L V ++ N L +GL T + L LR +T R+P+ +M+ Sbjct: 22 PTFLVVAGALPGLFVATSFENGLMIGLVTAAAIVLMASLAPLLRCFTSMWSRVPVMLMVS 81 Query: 77 ASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVG----RAEAFAAKKGPALSALDGF 132 + + + + +++SLGI++PL+ N +V A K P ++A+ Sbjct: 82 VTAATLLGFAVRVANPVVFESLGIYLPLVAVNALVAAWIASDGLTVAPAKTPLMTAMFAA 141 Query: 133 SIGMGATCAMFVLGSLREIIGNGTLFD 159 ++ + A+ +G + ++ G +F Sbjct: 142 AMVL---AALTFVGFINGMLTTGQVFG 165 >UniRef50_B0MP91 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP91_9FIRM Length = 198 Score = 50.7 bits (120), Expect = 4e-05, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 6/157 (3%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 + + ++ N+ + LG + + GLGL T V+ +++ + W Sbjct: 7 FINTAMLAMFVENAIFSRALGTSVAFYASRKKESIFGLGLGITYVIVVSSCITFFIDGWL 66 Query: 64 P-----AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 + IY + ++ V + +L+ + +++++ ++ L V N V+G Sbjct: 67 ADWQYFYVVMPLIYTLTVSIVYTGSLLLLWRFLPKIFRNIKKYVHLSVFNAAVLGALFLN 126 Query: 119 AAKKGPALSAL-DGFSIGMGATCAMFVLGSLREIIGN 154 S + G I G A+F L E + + Sbjct: 127 TTYHADFFSYMGFGVGIAAGFFIAVFFLHIANERLNS 163 >UniRef50_B2A6W6 SoxR-reducing system protein RsxE n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W6_NATTJ Length = 86 Score = 48.0 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 23/38 (60%), Positives = 32/38 (84%) Query: 85 MLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 ML+ AY+ L +S GIF+PLIVTNC+++ R+EAFA+KK Sbjct: 1 MLLEAYSPALQKSRGIFVPLIVTNCLILERSEAFASKK 38 >UniRef50_A6NPN4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN4_9BACE Length = 193 Score = 48.0 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 54/122 (44%), Gaps = 6/122 (4%) Query: 37 NALGLGLATTLVLTLTNLTISTLRHWTPA-----EIRIPIYVMIIASVVSAVQMLINAYA 91 +AL +GL T+ LT + L + + + + ++++ A + L+ + Sbjct: 37 SALAMGLTVTVGLTASMLLCWVVYAFLLSPFGAEYLEEAFFLLLTAGLAWLANRLMTKFL 96 Query: 92 FGLYQSLGIFIPLIVTNCIVVGRAEAFA-AKKGPALSALDGFSIGMGATCAMFVLGSLRE 150 G + L +P+ NC V+G A + ++ G A + G G+G T A V S+ E Sbjct: 97 PGKAEHLRQSLPMAAINCAVLGGAMLVSRSEVGLAPALRSGLLSGIGFTVAALVFVSVWE 156 Query: 151 II 152 + Sbjct: 157 RV 158 >UniRef50_UPI0001C372EF hypothetical protein RflaF_11025 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372EF Length = 191 Score = 46.1 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 12/155 (7%) Query: 9 VQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIR 68 + L N L Q LG + S N + TL T+ + + + P +R Sbjct: 7 IIALLAANLILTQALGTSTMFIAASGRKNLVRTACVITLFTTVASAFTYFVDVFMPDSVR 66 Query: 69 ----IPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVG-------RAEA 117 + Y +II + + ++ + +++ +I + NC V+G RA A Sbjct: 67 VYATLICYTLIIGVLYALFLTVLYLFGREKFEAYKKYIHISAFNCAVMGTLFTISERAAA 126 Query: 118 FAAKKGPALSALDGFSIGMGATCA-MFVLGSLREI 151 + + L+G G+G A +F+ + R++ Sbjct: 127 DPSLRNTVTYFLNGLEAGVGFIIASLFLAAAFRKL 161 >UniRef50_Q73MW3 Membrane protein, putative n=1 Tax=Treponema denticola RepID=Q73MW3_TREDE Length = 197 Score = 43.4 bits (101), Expect = 0.006, Method: Composition-based stats. Identities = 35/208 (16%), Positives = 75/208 (36%), Gaps = 11/208 (5%) Query: 12 LWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPI 71 + N +V L GLCP++ S + L ++ ++ L L + Sbjct: 1 MAANKKLIVFLFGLCPIIPAASNFAYGIVLTVSLWVIFFLGILGNYVGKLIDINRFNYVF 60 Query: 72 YVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDG 131 + + + + V L+ ++ L ++ ++ + I+ K+ S + Sbjct: 61 VSIFMITGTALVNALLEGILPIIHGPLQVYTYILTFSYII-----FLGLKQYYEDS--ES 113 Query: 132 FSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPG 191 + + + + L +LRE G+L + S LR+ F F G Sbjct: 114 LDLPIWYSVLILSLSALREFFAFGSL----SFPVSSGFLSLRLPYFSNHPLFRFLGTTAG 169 Query: 192 AFIGLGLMLAGKYLIDERMKKRRAEAAA 219 AFI LGL++ + + + + + Sbjct: 170 AFIILGLIIWIYFSVTKELPTVKMGEEE 197 >UniRef50_C0EE35 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE35_9CLOT Length = 205 Score = 42.6 bits (99), Expect = 0.010, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 5/115 (4%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 +++ ++ N+ + LG +L + N L G+ TL+ + ++ + Sbjct: 15 FFSMLILAIFLENTVFTRALGTSTVLLMLRKKANLLLFGVVLTLITVIASVLAFWINPLL 74 Query: 64 P-----AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVG 113 + +YV+II+ V +++ L + L I L NC V G Sbjct: 75 ADFPNKYYVTPIVYVLIISLVYVVALIVVKRLLKRLAEELVPMIHLSAFNCAVFG 129 >UniRef50_UPI0001699AC7 Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699AC7 Length = 201 Score = 40.7 bits (94), Expect = 0.045, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 16/93 (17%) Query: 1 MSEIKDVIVQGL------WKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNL 54 M E +++ + +V + G + G G TT VLTL+++ Sbjct: 1 MKEYALILISTVPGKQLRAGEVPGVVSVYG-----GLAQAGDRHGGWGWLTTFVLTLSSI 55 Query: 55 TISTLRHWTPAEI-----RIPIYVMIIASVVSA 82 + A + R ++++IA VV Sbjct: 56 CSYLANEYLLAPLGLEFMRTIAFILVIAVVVQF 88 >UniRef50_C8PP66 Putative membrane protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PP66_9SPIO Length = 198 Score = 39.9 bits (92), Expect = 0.077, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 70/193 (36%), Gaps = 13/193 (6%) Query: 16 NSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMI 75 N +++ LGLCP++ + + L L+ + L+ + ++ ++ I + Sbjct: 3 NKSIIFFLGLCPIIPLAAHFAEGLIFIAEFWLLFAASILSKQLINYFKIGKLSQIITYLA 62 Query: 76 IASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIG 135 I + I + +L +I + + I++ + + + P F + Sbjct: 63 IMLAAALYAQAIGVIFPVMAVTLERYIYMAAFSYILIISIGMYDSSRYP-------FELP 115 Query: 136 MGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIG 195 + + + LRE+I GTL L S + + + + P G + Sbjct: 116 VTYSLLLTATSILRELIVFGTL------SLPSRSGLFSITLIPLSLPLKFWGSSAGVLMV 169 Query: 196 LGLMLAGKYLIDE 208 LG+ L + Sbjct: 170 LGIALWLFRSFHK 182 >UniRef50_C7PPI2 Putative uncharacterized protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PPI2_CHIPD Length = 826 Score = 39.5 bits (91), Expect = 0.084, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 5/105 (4%) Query: 46 TLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLI 105 T++L N + P +R+ ++ ++ S + M + + F LY +G F+ I Sbjct: 95 TVILCAVNYLAFAYLRFLPVLVRLCMFFLLGLSFCCFLYMTVYIFPFSLYGMMGFFLLGI 154 Query: 106 VTNCIV-----VGRAEAFAAKKGPALSALDGFSIGMGATCAMFVL 145 + I+ V + + S F G+GAT + V+ Sbjct: 155 PLHAILPLLLCVYTIRVWRKNRQQRSSYDIAFFSGIGATVLLIVI 199 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B1LEQ4 Electron transport complex protein rnfE n=88 Tax... 232 1e-59 UniRef50_C5BTA2 Electron transport complex, RnfABCDGE type, E su... 221 1e-56 UniRef50_Q9F5Y1 Electron transport complex protein rnfE n=15 Tax... 220 3e-56 UniRef50_A5F2S7 Electron transport complex protein rnfE n=71 Tax... 218 1e-55 UniRef50_Q0VP36 Electron transport complex protein rnfE, putativ... 217 2e-55 UniRef50_Q315L1 Electron transport complex, RnfABCDGE type, E su... 212 6e-54 UniRef50_C7LXH4 Electron transport complex, RnfABCDGE type, E su... 211 2e-53 UniRef50_A1VAS6 Electron transport complex, RnfABCDGE type, E su... 211 2e-53 UniRef50_D0D1S5 SoxR-reducing system protein RsxE n=2 Tax=Proteo... 209 9e-53 UniRef50_C6BZT1 Electron transport complex, RnfABCDGE type, E su... 207 2e-52 UniRef50_C8WMP6 Electron transport complex, RnfABCDGE type, E su... 205 1e-51 UniRef50_A0L5G3 Electron transport complex, RnfABCDGE type, E su... 204 2e-51 UniRef50_A9KRX0 Electron transport complex, RnfABCDGE type, E su... 204 2e-51 UniRef50_B8J067 Electron transport complex, RnfABCDGE type, E su... 200 4e-50 UniRef50_C7GZP2 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 199 8e-50 UniRef50_D1PN89 NADH:ubiquinone oxidoreductase, Na(+)-translocat... 198 2e-49 UniRef50_D1Y5W2 Na(+)-translocating NADH-quinone reductase subun... 197 2e-49 UniRef50_B8D723 Electron transport complex protein rnfE n=5 Tax=... 197 4e-49 UniRef50_Q1PW71 Strongly similar to Na(+)-translocating NADH:qui... 196 4e-49 UniRef50_A6V1T4 Electron transport complex protein rnfE n=182 Ta... 195 8e-49 UniRef50_A7HK22 Electron transport complex, RnfABCDGE type, E su... 195 9e-49 UniRef50_C5SAZ4 Electron transport complex, RnfABCDGE type, E su... 194 2e-48 UniRef50_C1D6V3 NADH-ubiquinone oxidoreductase n=4 Tax=Betaprote... 194 2e-48 UniRef50_A1WT45 Electron transport complex, RnfABCDGE type, E su... 193 4e-48 UniRef50_Q2W403 Electron transport complex protein rnfE n=3 Tax=... 191 1e-47 UniRef50_D1B8H9 Electron transport complex, RnfABCDGE type, E su... 190 4e-47 UniRef50_Q3A7X1 NADH:ubiquinone oxidoreductase, RnfE subunit-lik... 188 1e-46 UniRef50_Q73PG4 Na(+)-translocating NADH-quinone reductase, D su... 188 1e-46 UniRef50_A5N7M8 RnfE n=5 Tax=Clostridiales RepID=A5N7M8_CLOK5 188 2e-46 UniRef50_C7RDT4 Electron transport complex, RnfABCDGE type, E su... 187 3e-46 UniRef50_B8FN67 Electron transport complex, RnfABCDGE type, E su... 186 4e-46 UniRef50_D0L1N2 Electron transport complex, RnfABCDGE type, E su... 186 5e-46 UniRef50_C0R023 SoxR-reducing system protein RsxE n=2 Tax=Brachy... 186 6e-46 UniRef50_C8PN80 Na(+)-translocating NADH-quinone reductase subun... 183 3e-45 UniRef50_B2A682 Electron transport complex, RnfABCDGE type, E su... 179 5e-44 UniRef50_B7UZU0 Na(+)-translocating NADH-quinone reductase subun... 178 1e-43 UniRef50_A4SQL7 Na(+)-translocating NADH-quinone reductase subun... 177 3e-43 UniRef50_Q5P1B5 NADH:ubiquinone oxidoreductase, subunit RnfE n=3... 175 9e-43 UniRef50_A6TT08 RnfA-Nqr electron transport subunit n=8 Tax=Bact... 173 5e-42 UniRef50_A8ZSV5 RnfA-Nqr electron transport subunit n=2 Tax=Desu... 173 6e-42 UniRef50_D1VUK9 Electron transport complex protein RnfE n=1 Tax=... 172 8e-42 UniRef50_D2MN20 Rnf-Nqr subunit, membrane protein (Fragment) n=4... 172 9e-42 UniRef50_Q12W80 Electron transport complex protein rnfE n=2 Tax=... 171 2e-41 UniRef50_Q7VNU6 Na(+)-translocating NADH-quinone reductase subun... 170 3e-41 UniRef50_A1F5P3 Electron transport complex protein RnfE n=1 Tax=... 167 3e-40 UniRef50_A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase ... 163 6e-39 UniRef50_Q3KM82 Na(+)-translocating NADH-quinone reductase subun... 160 4e-38 UniRef50_Q2LXT9 Sodium-translocating NADH-quinone reductase subu... 157 3e-37 UniRef50_D1PJN1 Putative electron transport complex protein RnfE... 150 3e-35 UniRef50_B0MP92 Putative uncharacterized protein n=1 Tax=Eubacte... 135 2e-30 UniRef50_Q2NSZ5 Electron transport complex protein rnfA n=11 Tax... 133 6e-30 UniRef50_A6NPN3 Putative uncharacterized protein n=1 Tax=Bactero... 132 7e-30 UniRef50_D2RN92 Electron transport complex, RnfABCDGE type, A su... 131 1e-29 UniRef50_A7FHZ1 Electron transport complex protein rnfA n=360 Ta... 129 8e-29 UniRef50_UPI0001C372EE electron transport complex, RnfABCDGE typ... 129 9e-29 UniRef50_C1DEF3 Electron transport complex protein rnfA n=60 Tax... 128 1e-28 UniRef50_B7UWJ4 Electron transport complex protein rnfA n=85 Tax... 128 1e-28 UniRef50_B8CY11 Electron transport complex, RnfABCDGE type, A su... 127 3e-28 UniRef50_A8ZY02 Electron transport complex, RnfABCDGE type, A su... 127 3e-28 UniRef50_C5SAZ5 Electron transport complex, RnfABCDGE type, A su... 127 4e-28 UniRef50_A6DRQ4 Na(+)-translocating NADH-quinone reductase subun... 124 2e-27 UniRef50_Q3KM81 Na(+)-translocating NADH-quinone reductase subun... 123 5e-27 UniRef50_A6L724 Na+-transporting NADH:ubiquinone oxidoreductase,... 122 9e-27 UniRef50_Q2LXT8 Sodium-translocating NADH-quinone reductase subu... 121 2e-26 UniRef50_D2MN21 Electron transport complex, RnfABCDGE type, A su... 121 2e-26 UniRef50_C8WMP5 Electron transport complex, RnfABCDGE type, A su... 121 2e-26 UniRef50_A7HKQ4 RnfA-Nqr electron transport subunit n=8 Tax=Bact... 118 1e-25 UniRef50_A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase ... 118 2e-25 UniRef50_B5YE59 Na(+)-translocating NADH-quinone reductase subun... 117 3e-25 UniRef50_A8S6D1 Putative uncharacterized protein n=2 Tax=Faecali... 117 3e-25 UniRef50_A1WT44 RnfA-Nqr electron transport subunit n=13 Tax=Bac... 116 6e-25 UniRef50_A6LW81 RnfA-Nqr electron transport subunit n=1 Tax=Clos... 116 6e-25 UniRef50_C0EE36 Putative uncharacterized protein n=1 Tax=Clostri... 116 8e-25 UniRef50_Q73PG5 Na(+)-translocating NADH-quinone reductase, E su... 113 5e-24 UniRef50_Q9ZC45 Na(+)-translocating NADH-quinone reductase subun... 113 6e-24 UniRef50_Q12W81 Electron transport complex protein rnfA n=2 Tax=... 111 1e-23 UniRef50_C8R0U7 NADH:ubiquinone oxidoreductase, subunit E n=1 Ta... 111 1e-23 UniRef50_A8ZSV6 RnfA-Nqr electron transport subunit n=1 Tax=Desu... 111 2e-23 UniRef50_C0QFQ8 RnfA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 111 3e-23 UniRef50_Q487D7 Na(+)-translocating NADH-quinone reductase subun... 108 1e-22 UniRef50_Q4K753 Putative uncharacterized protein n=1 Tax=Pseudom... 101 1e-20 UniRef50_Q1Q255 Similar to Na(+)-translocating NADH-quinone redu... 99 6e-20 UniRef50_Q3K7K5 Putative electron transport complex, RnfABCDGE t... 93 6e-18 UniRef50_UPI0001699AE2 RnfA-Nqr electron transport subunit n=1 T... 90 5e-17 UniRef50_B0P6D1 Putative uncharacterized protein n=1 Tax=Anaerot... 90 6e-17 UniRef50_A9NEB4 NADH oxidoreductase complex RnfABCDGE type, E su... 90 8e-17 UniRef50_A4MZD9 Na(+)-translocating NADH-quinone reductase subun... 86 1e-15 UniRef50_UPI0000397FA3 COG4657: Predicted NADH:ubiquinone oxidor... 85 2e-15 UniRef50_B0MP91 Putative uncharacterized protein n=1 Tax=Eubacte... 84 4e-15 UniRef50_A7C280 RnfA-Nqr electron transport subunit n=1 Tax=Begg... 76 1e-12 UniRef50_UPI0001C372EF hypothetical protein RflaF_11025 n=1 Tax=... 75 1e-12 UniRef50_B6G8I1 Putative uncharacterized protein n=2 Tax=Collins... 75 2e-12 UniRef50_A6NPN4 Putative uncharacterized protein n=1 Tax=Bactero... 68 2e-10 UniRef50_B2A6W6 SoxR-reducing system protein RsxE n=1 Tax=Natran... 47 5e-04 Sequences not found previously or not previously below threshold: UniRef50_C0EE35 Putative uncharacterized protein n=1 Tax=Clostri... 53 1e-05 UniRef50_B0P6D2 Putative uncharacterized protein n=1 Tax=Anaerot... 46 0.001 UniRef50_B6G8I2 Putative uncharacterized protein n=2 Tax=Collins... 43 0.006 UniRef50_Q73MW3 Membrane protein, putative n=1 Tax=Treponema den... 43 0.009 UniRef50_UPI0001699AC7 Electron transport complex, RnfABCDGE typ... 42 0.012 UniRef50_C8PP66 Putative membrane protein n=1 Tax=Treponema vinc... 40 0.058 >UniRef50_B1LEQ4 Electron transport complex protein rnfE n=88 Tax=Proteobacteria RepID=RNFE_ECOSM Length = 231 Score = 232 bits (591), Expect = 1e-59, Method: Composition-based stats. Identities = 229/231 (99%), Positives = 229/231 (99%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR Sbjct: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA Sbjct: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 KKGPALSALDGFSIGMGATCAM VLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD Sbjct: 121 KKGPALSALDGFSIGMGATCAMCVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGNV 231 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRR EAAAERALPNGETGNV Sbjct: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRTEAAAERALPNGETGNV 231 >UniRef50_C5BTA2 Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Proteobacteria RepID=C5BTA2_TERTT Length = 253 Score = 221 bits (564), Expect = 1e-56, Method: Composition-based stats. Identities = 105/214 (49%), Positives = 148/214 (69%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 +D G+W+NN ALVQLLGLCP++AVT++ATN LG+G+ATT VL ++++ +S LRH Sbjct: 28 KRYRDYFSFGIWENNIALVQLLGLCPVMAVTTSATNGLGMGIATTAVLIISSVLVSALRH 87 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 PA++R P+ + IIA V+ V + +NA+ LY+ LG+FI LIVTNC ++GR EAFA K Sbjct: 88 TIPAQVRNPVMIAIIAGTVTLVDLAMNAWMHELYKVLGLFIALIVTNCAILGRTEAFAMK 147 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 + P + DG +G+G T A+ +LG REI+G+GTLF A +LLGS + L + DS Sbjct: 148 QPPMAALADGVGMGLGFTWALVLLGGAREILGSGTLFAHASSLLGSHFEWLEITFVEVDS 207 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRA 215 LLA+LPPG FI LG+M+A K ++DER+ Sbjct: 208 GVLLAILPPGGFIVLGIMIALKRVVDERIAAAGK 241 >UniRef50_Q9F5Y1 Electron transport complex protein rnfE n=15 Tax=Bacteria RepID=RNFE_AZOVD Length = 238 Score = 220 bits (560), Expect = 3e-56, Method: Composition-based stats. Identities = 106/216 (49%), Positives = 141/216 (65%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 LW+ N ALVQ+L LCP LAVT+TATN LG+GLATTLVL +TN IS++RH Sbjct: 18 WQYFTSALWQYNVALVQMLALCPTLAVTTTATNGLGMGLATTLVLVMTNALISSMRHTIS 77 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 E+R P+ + +IA VV+ M +NA+ LY+ LG+FI LIVTNC V+GRAE+F + Sbjct: 78 PEVRNPVMIGVIAGVVTLTDMAMNAWMHELYKVLGLFIALIVTNCAVLGRAESFCLRNPV 137 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 S LDG +G G T + V+G +REI+G+GTLF A +LLGS K + + + L Sbjct: 138 IPSILDGAGMGAGFTAVLVVIGGIREILGSGTLFSQASSLLGSHFKWMEITVIPDFQGIL 197 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 LA+LPPGAFI LG +LA K +ID + +RR + E Sbjct: 198 LAILPPGAFIVLGFLLAAKRVIDRKRAERRQQTHGE 233 >UniRef50_A5F2S7 Electron transport complex protein rnfE n=71 Tax=Proteobacteria RepID=RNFE_VIBC3 Length = 230 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 142/220 (64%), Positives = 182/220 (82%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MSE + +++ G+W NN ALVQLLGLCPLLAV+ST TNALGLG+AT LVL +N+T+S +R Sbjct: 1 MSENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P E+RIP++VMIIAS+V+ VQ+L+NAYA+GLY SLGIFIPLIVTNCI++GRAEAFA+ Sbjct: 61 DYVPKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRAEAFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K +ALDGF +G+G T + VLGSLREIIGNGTLFDGAD LLG WAKVLR+E+FH D Sbjct: 121 KNDVLPAALDGFWMGLGMTSVLVVLGSLREIIGNGTLFDGADLLLGEWAKVLRIEVFHFD 180 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 S FLLA+LPPGAFIG+G ++A K +ID+++ R+ + + Sbjct: 181 SAFLLALLPPGAFIGVGFLIAAKSVIDKQIAARQPKQQKQ 220 >UniRef50_Q0VP36 Electron transport complex protein rnfE, putative n=10 Tax=Gammaproteobacteria RepID=Q0VP36_ALCBS Length = 238 Score = 217 bits (553), Expect = 2e-55, Method: Composition-based stats. Identities = 107/226 (47%), Positives = 152/226 (67%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 K + + GLW NN A VQ+LGLCPLLAVT + NA+GLGLAT +VL +N +S +RH+ Sbjct: 6 NYKKISMDGLWNNNPATVQILGLCPLLAVTGSVVNAMGLGLATLVVLMGSNACVSLIRHY 65 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 +R+P +VMIIA++V+ ++ML+ AY F LY+ LGIFIPLIVTNC V+GRA+AFA+K Sbjct: 66 VTDAVRLPAFVMIIAAMVTVIEMLMQAYTFELYEILGIFIPLIVTNCTVLGRADAFASKN 125 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 + +DG +GMG + +LG +RE++G GTLF L G A + + Sbjct: 126 AVLPAMVDGVMMGMGFLVILLILGGMRELVGQGTLFSNMQLLFGPMAAHWELTVIDNYGG 185 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGET 228 FLLA+LPPGAF+GLGL++AGK +ID+R+K+ + A++ + Sbjct: 186 FLLAILPPGAFLGLGLIIAGKNVIDKRIKEVQKRKASDEPKTSRRV 231 >UniRef50_Q315L1 Electron transport complex, RnfABCDGE type, E subunit n=5 Tax=Bacteria RepID=Q315L1_DESDG Length = 224 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 94/230 (40%), Positives = 132/230 (57%), Gaps = 13/230 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ + +GLW+ +LGLCP+LAVT +A N G+G+A VL L+N+ IS +R Sbjct: 1 MASMWKEFSKGLWREIPPFRLVLGLCPVLAVTKSANNGFGMGMAVIFVLFLSNVIISLVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P ++RI Y+ I AS+V A+++L+ AYA+ LYQ LGIF+PLIV NCI++GRAEAFA Sbjct: 61 NLIPKKVRIACYIAIAASLVVAIELLMQAYAYPLYQQLGIFVPLIVVNCIILGRAEAFAG 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K L+A DG IGMG ++ LGSLRE++G GT+F ++ Sbjct: 121 KNPVHLAAADGLGIGMGFCLSLTFLGSLREMLGTGTVFG-------------HQVMWQGF 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGN 230 P + PGAFI LGL+L L+ KR+ E P E+ Sbjct: 168 KPLTFMVEAPGAFISLGLVLGAMNLLSIVQAKRKGIPEPENPTPGCESCR 217 >UniRef50_C7LXH4 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Desulfovibrionales RepID=C7LXH4_DESBD Length = 239 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 94/227 (41%), Positives = 131/227 (57%), Gaps = 13/227 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ + +GLW +LGLCP+LAVT+TA N LG+G A VL+L+N+ IS +R Sbjct: 1 MASMMKEFTKGLWNELPPFRLVLGLCPVLAVTTTANNGLGMGAAVIFVLSLSNVIISLVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P ++RI ++ I AS+V V+ML+ A+A+ LYQ LGIF+PLIV NCI++GRAEAFAA Sbjct: 61 NIIPKKVRIVCFIAIAASLVVTVEMLMQAFAYPLYQQLGIFVPLIVVNCIILGRAEAFAA 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K P L+ DG +G+G T ++ LGSLREI G+GT F + Sbjct: 121 KNPPLLALADGLGMGIGFTLSLTFLGSLREIFGSGTWFGMSL-------------FGPDF 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 PF + PGAF+ LGL+LAG ++ KR+ Sbjct: 168 HPFTFMVQAPGAFVCLGLILAGMNFLNVWQAKRKGVELDPNFDAGCA 214 >UniRef50_A1VAS6 Electron transport complex, RnfABCDGE type, E subunit n=11 Tax=Bacteria RepID=A1VAS6_DESVV Length = 223 Score = 211 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 97/230 (42%), Positives = 133/230 (57%), Gaps = 13/230 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M +I +GLW+ +LGLCP LAVT TA+N LG+GLA VL L+N+ IS +R Sbjct: 1 MQQIIKEFTKGLWQELPPFRLVLGLCPTLAVTKTASNGLGMGLAVIFVLALSNMIISMVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P ++RI ++ I AS+V AV++L+ AYA+ LYQ LGIF+PLIV NCI++GRAEAFAA Sbjct: 61 NIIPKKVRIACFIAISASLVVAVELLMQAYAYPLYQQLGIFVPLIVVNCIILGRAEAFAA 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K +LS DG IG+G T ++ LG +RE+ G G LF ++ Sbjct: 121 KNPVSLSLADGLGIGLGFTLSLVFLGGIRELFGTGMLFG-------------TQVMWQGY 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGN 230 PF + + PGAFI LGL LA +I+ +R+ A E Sbjct: 168 QPFGIMVEAPGAFICLGLTLAAMNVINTWQARRKGLEAPENPQSGCAACR 217 >UniRef50_D0D1S5 SoxR-reducing system protein RsxE n=2 Tax=Proteobacteria RepID=D0D1S5_9RHOB Length = 321 Score = 209 bits (531), Expect = 9e-53, Method: Composition-based stats. Identities = 105/228 (46%), Positives = 140/228 (61%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 + GLW NN Q+L CPLLAVT TAT LG+GLATT VL + L +S LR Sbjct: 5 YARIARDGLWDNNVVFGQMLAHCPLLAVTGTATKGLGIGLATTAVLVASGLAVSLLRGAI 64 Query: 64 PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKG 123 IRIP +V++IA +V+ V M +NA++ L+Q LG+FIPLIVTNC ++GRAEA A++ Sbjct: 65 LPGIRIPAFVLLIACIVNVVDMALNAWSHDLHQVLGLFIPLIVTNCAILGRAEALASRNR 124 Query: 124 PALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPF 183 P SA DG +G+G T A+ VLG+ REI+G+GTLF A LLG L + + F Sbjct: 125 PLASAFDGLMMGLGFTAALVVLGAAREILGSGTLFANASVLLGESVSFLEITVIPDYQGF 184 Query: 184 LLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGNV 231 LL +LPPG FI LG +LA K L ++R++ A A + G + Sbjct: 185 LLLILPPGVFIVLGALLALKALAEQRVRTEDARRNAPQGRVFTAVGVL 232 >UniRef50_C6BZT1 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Desulfovibrionales RepID=C6BZT1_DESAD Length = 228 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 91/227 (40%), Positives = 136/227 (59%), Gaps = 13/227 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MS + +GLW LLGLCP+LAVTS+A N LG+G+A VLT++NL IS++R Sbjct: 1 MSRLVKEFAKGLWDELPPFRVLLGLCPVLAVTSSAENGLGMGMAVIFVLTMSNLIISSIR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 P ++RI +++I AS+V V++L+ AYA+ LYQ LGIF+PLIV NC+++GRAEAFA+ Sbjct: 61 KIIPTKVRIACFIVITASLVVTVELLMQAYAYPLYQKLGIFVPLIVVNCLILGRAEAFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K G LS D +G+G ++ LG++REIIG GT+F ++ + Sbjct: 121 KNGVILSIADALGMGIGFAVSLTFLGAIREIIGAGTVFG-------------VPVMWESF 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 P ++ PGAF+GLG++LAG + +++ E + Sbjct: 168 KPAEFMIMAPGAFVGLGVILAGMNAFNRYQSRKKGETVPDVMNSGCA 214 >UniRef50_C8WMP6 Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WMP6_EGGLE Length = 235 Score = 205 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 84/224 (37%), Positives = 126/224 (56%), Gaps = 13/224 (5%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 V +GL N L Q+LGLCP LAVT+ TN +G+G+ATT VL + + +S LR+ P Sbjct: 11 LSVFSKGLLIENPTLRQMLGLCPTLAVTTAVTNGIGMGVATTFVLVCSGIVVSLLRNIIP 70 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 +R+P ++ +IA V+ V M++ AY L Q+LGI++PLIV NCIV+GRAE FA+K Sbjct: 71 TTMRLPAFITVIAGFVTIVMMVVEAYLPDLNQALGIYLPLIVVNCIVLGRAEVFASKHPV 130 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 +ALDG +G G T + ++ ++RE++G GTL L P Sbjct: 131 KDAALDGLGMGAGFTLTLVLMSAIRELLGAGTLLGFPILL-------------GIVEPMT 177 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGET 228 + ++PPG F LG+++A + + R K+R E E + Sbjct: 178 VFIMPPGGFAVLGVLIAISVVFEMRRKRRAGEPEDEAIASQEDV 221 >UniRef50_A0L5G3 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Bacteria RepID=A0L5G3_MAGSM Length = 222 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 93/227 (40%), Positives = 142/227 (62%), Gaps = 12/227 (5%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 ++++ G W NN+ QLLG+CPLL VT+TA N +G+GLA+ +VL N+ ++ +R + P Sbjct: 7 REIVANGFWNNNAVFAQLLGMCPLLGVTTTAMNGIGMGLASLVVLLGANVVVAMVRSYIP 66 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 +E+RIP Y+++IAS V+ V + +NA+ L++ LG+FIPLIV NC ++GRAEAFA++ Sbjct: 67 SEVRIPSYIVVIASFVTIVDLCMNAWLHDLHKILGLFIPLIVVNCAILGRAEAFASRNSV 126 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 SA+DG + G+G T A+FVLG++REI+G G +F V + P L Sbjct: 127 GKSAIDGIATGLGFTFALFVLGAVREILGAGEIFGY------------DVMSWSGFHPAL 174 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGETGNV 231 +LPPGAFI LG +L G ++ER + A+ ++ G V Sbjct: 175 GFVLPPGAFIALGFILMGVKWLNERRELAAAKKPKQKRASGEAVGVV 221 >UniRef50_A9KRX0 Electron transport complex, RnfABCDGE type, E subunit n=102 Tax=Bacteria RepID=A9KRX0_CLOPH Length = 253 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 85/228 (37%), Positives = 129/228 (56%), Gaps = 13/228 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MS+ + I G+ K N V +LG+CP LAVT++A N +G+GL TT VL ++N+ IS LR Sbjct: 1 MSKALERIYNGVIKENPTFVLMLGMCPTLAVTTSAINGVGMGLTTTAVLIMSNMLISMLR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 P ++R+P +++++AS V+ VQ+L+ AY L SLGI+IPLIV NCI++GRAEA+A+ Sbjct: 61 KAIPDKVRMPAFIVVVASFVTIVQLLLQAYLPSLNDSLGIYIPLIVVNCIILGRAEAYAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K S DG +G+G T + ++G REI+G GT F + + Sbjct: 121 KYPVYPSIFDGVGMGLGFTVGLTLIGLFREILGAGTAFGFSIMP-------------DSY 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGET 228 PF + +L PGAF L ++ A + + + A N + Sbjct: 168 EPFSIFVLAPGAFFVLAMLTALQNKLKLKSATNVPMADKLACGGNCSS 215 >UniRef50_B8J067 Electron transport complex, RnfABCDGE type, E subunit n=24 Tax=Bacteria RepID=B8J067_DESDA Length = 225 Score = 200 bits (508), Expect = 4e-50, Method: Composition-based stats. Identities = 96/219 (43%), Positives = 130/219 (59%), Gaps = 13/219 (5%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 I +GLWK +LGLCP LAVT++A N LG+G+A VL L+N+ IS +R Sbjct: 2 SILQEFTKGLWKELPPFRLVLGLCPTLAVTNSADNGLGMGVAVIFVLVLSNMLISMVRSI 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P +RI +++I AS+V AV++L+ AYA+ LYQ LGIF+PLIV NCI++GRAEAFAAK Sbjct: 62 IPKTVRIACFIVIAASLVVAVELLMQAYAYPLYQRLGIFVPLIVVNCIILGRAEAFAAKN 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 G A S DG +G+G T ++ LGSLREI GNGT F + ++ P Sbjct: 122 GVAASIADGLGMGLGFTLSLTFLGSLREIFGNGTWFGQSV-------------MWEGFEP 168 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAER 221 + + PGAFI LGL+LA + + R A + Sbjct: 169 MRIMIQAPGAFICLGLILAAMNMYNYWKAGRGKAVPAPQ 207 >UniRef50_C7GZP2 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZP2_9FIRM Length = 272 Score = 199 bits (506), Expect = 8e-50, Method: Composition-based stats. Identities = 82/216 (37%), Positives = 123/216 (56%), Gaps = 13/216 (6%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 + +G+ K N LV LLG CP LA T++A N +G+G++T +VLT +N+ IS L+ P Sbjct: 4 LQIFTKGIIKENPVLVLLLGTCPTLATTTSAINGVGMGVSTLVVLTCSNIAISALKKVIP 63 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 ++RIP Y+++IA V+ VQ+L+ Y L ++LG+FIPLIV NCI++GRAE FA+K Sbjct: 64 DKVRIPCYIVVIAGFVTIVQLLLKGYVPTLDKALGLFIPLIVVNCIILGRAEMFASKNSL 123 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 S LDG +G+G T A+ +G +REI+GNGT F A +P Sbjct: 124 LDSILDGLGMGVGFTLALGCMGLIREIVGNGTAFGFALTKS-------------FLTPMS 170 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 L M+ PG F +++A ++ E + Sbjct: 171 LFMMAPGGFFVFAILIALINWRSNGKAIKKKEIGCQ 206 >UniRef50_D1PN89 NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit n=8 Tax=Bacteria RepID=D1PN89_9FIRM Length = 230 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 116/215 (53%), Gaps = 13/215 (6%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 V G+ + N L +LG C LAVT+T + A+G+GL+ T VL +N+ IS LR P Sbjct: 8 WKVFTAGIIRENPVLRLVLGCCSALAVTTTVSGAVGMGLSMTFVLVCSNIVISALRKVIP 67 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 ++ +P Y++IIA+ V+ VQM++ A+ LY+SLG+F+ LIV NCI++GRAE FA K Sbjct: 68 GKVHLPCYIVIIATFVTVVQMVLQAFVPDLYKSLGVFLALIVVNCIILGRAEMFACKNTV 127 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 SALDG +G+G M ++ S+REIIG+G+ + Sbjct: 128 VDSALDGLGMGIGYILTMTLMSSIREIIGSGSWLGITIIP-------------ESVDRMT 174 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAA 219 + PG F G ++AG ++ ++ K Sbjct: 175 IMNSAPGGFFVFGCLMAGCVWLERKLNKPIERKTC 209 >UniRef50_D1Y5W2 Na(+)-translocating NADH-quinone reductase subunit d n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5W2_9BACT Length = 243 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 137/222 (61%), Gaps = 12/222 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 MS IV GL+ N V +LG+CP +AVTS+A N L +GLA T VL +N+ IS LR Sbjct: 1 MSNPLKTIVNGLFAENPIFVLVLGMCPTIAVTSSAMNGLSMGLAATAVLIGSNVAISALR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P EIRIP ++++IA V+A+Q++I AY L ++LGIFIPLIV NCI++ RAEAFA+ Sbjct: 61 RFIPDEIRIPSFIVVIAGFVTALQLIIAAYFPALDKALGIFIPLIVVNCIILARAEAFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K G SA DG +G+G T A+ ++G++RE+IG G++F G Sbjct: 121 KNGVFASACDGLGMGLGFTLALILIGAIRELIGAGSVFGANVFAPG------------FY 168 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERA 222 P LLA+L PG FI LG+++A + + R + + AE A Sbjct: 169 QPALLAILAPGGFITLGVLMAVMHQLKIRKELKSLAPLAESA 210 >UniRef50_B8D723 Electron transport complex protein rnfE n=5 Tax=Buchnera aphidicola RepID=RNFE_BUCAT Length = 227 Score = 197 bits (500), Expect = 4e-49, Method: Composition-based stats. Identities = 114/223 (51%), Positives = 154/223 (69%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 IK + LWKNNS+LVQLLGLCP+LA+T+ A NA+GLG+ TTLVLT+TN IS+ R Sbjct: 2 NIKSFLNNRLWKNNSSLVQLLGLCPVLAMTTNAINAIGLGMTTTLVLTITNTIISSFRKI 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P ++RIPIY+MII+SVV++++ML++AY F LYQSLGIFIPLIVTNCI+VGRA+ A K Sbjct: 62 IPKDLRIPIYMMIISSVVTSIEMLLHAYTFNLYQSLGIFIPLIVTNCIIVGRADLIAYKS 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 S DG IG+G+ AMF +GS+REI+GNGTLF GA+ ++ + + + Sbjct: 122 SIVESFFDGIFIGLGSMFAMFAVGSIREILGNGTLFFGANKIISNIHSSVFFTLLDKKFT 181 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPN 225 +LA+ PPG F+ LG ++A K ID KK + + + N Sbjct: 182 IILAVFPPGGFLILGFLIAIKNFIDLYYKKNTIKNIEQCSCSN 224 >UniRef50_Q1PW71 Strongly similar to Na(+)-translocating NADH:quinone reductase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW71_9BACT Length = 210 Score = 196 bits (499), Expect = 4e-49, Method: Composition-based stats. Identities = 80/216 (37%), Positives = 125/216 (57%), Gaps = 15/216 (6%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 +GL+K N+ V +LG+CP LAVT++ N + +G A T VL +N IS +R Sbjct: 3 QSNWQEFSKGLFKYNALFVLVLGICPSLAVTTSLKNGVSMGGAATFVLVSSNFIISLIRP 62 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAF-GLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P EIRIP ++++IAS V+ V++++ AY + SLGIFIPLIV NCI++ RAEAFA Sbjct: 63 YVPREIRIPCFIVVIASFVTIVELMMKAYLPTEINASLGIFIPLIVVNCIILYRAEAFAY 122 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K P +S LDG IG+G T ++ ++ +RE++G GTLF +++ Sbjct: 123 KNKPFVSILDGLGIGLGWTLSLCLVSGVREMLGAGTLFG--------------LKLSERY 168 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAE 216 P + ++ PGAFI GL++ + ++ + Sbjct: 169 EPASIMIMAPGAFIITGLLMGLFNWRKQLKSEKSMK 204 >UniRef50_A6V1T4 Electron transport complex protein rnfE n=182 Tax=Bacteria RepID=RNFE_PSEA7 Length = 239 Score = 195 bits (497), Expect = 8e-49, Method: Composition-based stats. Identities = 110/229 (48%), Positives = 152/229 (66%), Gaps = 1/229 (0%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 ++++ GLW+NN LVQLLGLCPLL +++ NALGLGLAT LVL +N +S +R Sbjct: 6 LREIARDGLWRNNPGLVQLLGLCPLLGTSNSTVNALGLGLATLLVLVCSNAAVSLVRGAV 65 Query: 64 PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKG 123 IR+P +VMIIA++ + +++L+ A+ + LYQ LGIFIPLI TNC+++GRAEAFAAK G Sbjct: 66 SEAIRLPAFVMIIAALTTCIELLMQAWTYELYQILGIFIPLITTNCVILGRAEAFAAKNG 125 Query: 124 PALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPF 183 ++ DG G+G + VLG LRE++G GTL L G A+ +++IF F Sbjct: 126 VLRASFDGLLTGLGFALVLLVLGGLRELLGQGTLLADMQLLFGPAAETWKIQIFPHYQGF 185 Query: 184 LLAMLPPGAFIGLGLMLAGKYLIDERMKKR-RAEAAAERALPNGETGNV 231 LLA+LPPGAFI LGL++A K IDE + +R RA+A A P + V Sbjct: 186 LLAILPPGAFIMLGLLIALKNRIDESLAERARAQAGDVPASPQRQRVRV 234 >UniRef50_A7HK22 Electron transport complex, RnfABCDGE type, E subunit n=26 Tax=Bacteria RepID=A7HK22_FERNB Length = 217 Score = 195 bits (496), Expect = 9e-49, Method: Composition-based stats. Identities = 87/225 (38%), Positives = 143/225 (63%), Gaps = 14/225 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ +G+ K+N VQ+LG+CP LA T++A N G+GLA T VL ++N+ IS++R Sbjct: 1 MASKISEFTKGIIKDNPTYVQVLGMCPTLATTTSAKNGFGMGLAATAVLVMSNVVISSIR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 P +IRIPI++ +IA+ V+ V +L++A+ + L+++LG+FIPLIV NCI++GRAEA+A+ Sbjct: 61 KTVPEKIRIPIFITVIATFVTIVDLLMHAFTYDLWKTLGLFIPLIVVNCIIMGRAEAYAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K G S LDG +G+G T ++ +LGS+RE++GNG++F + I+ Sbjct: 121 KHGVLDSLLDGLGMGVGFTLSLTLLGSIRELLGNGSIF--------------DITIWGKA 166 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPN 225 + +LPPGA++ LGL+ A I + ++R ++A + Sbjct: 167 FNMFVMILPPGAYLTLGLLAALFAAISIKKEERAKKSAQQAGQAQ 211 >UniRef50_C5SAZ4 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Proteobacteria RepID=C5SAZ4_CHRVI Length = 220 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 86/211 (40%), Positives = 128/211 (60%), Gaps = 13/211 (6%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 D ++GLW+ N V LLG+CP+LAVTST NA+ +GLATT VL ++L IS LR+W P Sbjct: 14 DTFLRGLWEENPVFVMLLGMCPVLAVTSTTLNAIAMGLATTFVLVCSSLLISLLRNWIPK 73 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 ++RI Y++IIA+ V+ V I A + LY +LG FI LIV NC+++GRAEA+A+K+ Sbjct: 74 QVRIASYIVIIATFVTIVDYAIQAISLELYAALGAFIQLIVVNCVILGRAEAYASKQRLH 133 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLL 185 + ++ +G+G T A+ LG++RE++GNGTL P+L+ Sbjct: 134 TTLVNSLGMGVGFTLALLALGTVREVLGNGTLLGI-------------PLFGPDFQPWLV 180 Query: 186 AMLPPGAFIGLGLMLAGKYLIDERMKKRRAE 216 +LPPG F LG+ L + + +R A+ Sbjct: 181 MILPPGGFFVLGVWLLLFNWLRQSKVRRAAQ 211 >UniRef50_C1D6V3 NADH-ubiquinone oxidoreductase n=4 Tax=Betaproteobacteria RepID=C1D6V3_LARHH Length = 239 Score = 194 bits (493), Expect = 2e-48, Method: Composition-based stats. Identities = 103/223 (46%), Positives = 146/223 (65%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 S K + G+WK N+ +VQLLGLCP+LAV+++ N + LGLAT LV L+ ++ +R Sbjct: 16 SPWKSIAFNGIWKQNAGVVQLLGLCPVLAVSTSIVNGVSLGLATALVTALSGAAVAAVRQ 75 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 W P+EIR PI++ IIA++V+ V + +NA+ GLY LGIFIPLI TNCIV+ RAEAFA+K Sbjct: 76 WVPSEIRNPIFITIIAALVTMVDLAMNAWVHGLYNVLGIFIPLITTNCIVLARAEAFASK 135 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 SA DG +G+G T + +LG++RE+ G GTLF G D + G A L + + + Sbjct: 136 NPVRESAWDGLMMGLGLTGVLGLLGAMRELFGKGTLFSGIDLVFGPAAGALTLHLAPENY 195 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALP 224 FLLA+LPPGAF+GL ++AGK ++ R + + A A Sbjct: 196 QFLLALLPPGAFLGLACLIAGKNWLESRRRAQSRPATVNGAAS 238 >UniRef50_A1WT45 Electron transport complex, RnfABCDGE type, E subunit n=4 Tax=Bacteria RepID=A1WT45_HALHL Length = 219 Score = 193 bits (491), Expect = 4e-48, Method: Composition-based stats. Identities = 84/218 (38%), Positives = 120/218 (55%), Gaps = 13/218 (5%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 D + G+W+ N V LLG+CP+LAVT+T NAL +GLATT VL + +S LR + P Sbjct: 12 MDTFLSGVWRENPVFVMLLGMCPVLAVTNTTENALAMGLATTFVLVCSTGLVSVLRDFIP 71 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 E+RI Y++IIAS V+ V I A + +Y +LG FI LIV NC+++GRAEAFA++K Sbjct: 72 KEVRIASYIVIIASFVTVVDYAIQAISLDIYNALGAFIQLIVANCMILGRAEAFASRKPL 131 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 + +D +G G T A+ LG++RE++G G + P++ Sbjct: 132 GKTLVDALGVGAGFTLALLCLGTVRELLGAGEILGIQV-------------FADRFEPWV 178 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERA 222 + +LPPG F L L I ER +R A A Sbjct: 179 IMLLPPGGFFVLAGWLLLFAWIKERQNQRAAAGKEATA 216 >UniRef50_Q2W403 Electron transport complex protein rnfE n=3 Tax=Proteobacteria RepID=RNFE_MAGSA Length = 223 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 99/220 (45%), Positives = 143/220 (65%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + +I GLW+NN L LLG+CP +A+T TATN LG+GLAT V+ +NL ++ R+ Sbjct: 3 ASYGRIIKDGLWENNGVLCMLLGMCPTMAMTGTATNGLGMGLATAAVMAASNLMVAMFRN 62 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 + E+RIP+Y++I+A+ V+ V + +NA+ LY+ LG+FIPLIV+NC+ + R EAFAAK Sbjct: 63 YVTHEVRIPVYILIVAANVTFVDLGMNAWMHELYKVLGLFIPLIVSNCLPLARLEAFAAK 122 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 + S LDG +G+G T A+ +G++RE+IG GTLF A LLG WAK+L + + D Sbjct: 123 EPVLPSFLDGLFMGLGFTLALTAIGAVREMIGQGTLFADAALLLGPWAKLLELRVMPADW 182 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAER 221 L+ +LPPG F+ GLM+ K L+D K A A Sbjct: 183 GILVLILPPGGFLIAGLMVVAKRLVDLAGGKEIKMAGAHS 222 >UniRef50_D1B8H9 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Bacteria RepID=D1B8H9_THEAS Length = 239 Score = 190 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 92/205 (44%), Positives = 125/205 (60%), Gaps = 13/205 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ + I GL K N VQ +GLCP LAVT++A N LG+G+A T VL +N+ IS LR Sbjct: 1 MASFIERIRGGLAKENPVFVQAIGLCPTLAVTTSAVNGLGMGVAATAVLMGSNVVISMLR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P +IRIP ++++IA V+ +Q L++AYA L +SLGIFIPLIV NCI++ RAEAFA Sbjct: 61 RFIPNQIRIPAFIVVIAGFVTIIQFLVSAYAPVLDKSLGIFIPLIVVNCIILARAEAFAF 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K G S DG +G+G T A+ +LGS+REIIG GTLF Sbjct: 121 KNGVIPSLFDGIGMGLGFTVALMILGSIREIIGAGTLFGFHVLP-------------GYV 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYL 205 P L+ +L PG F+ +GL++ Sbjct: 168 QPALVMILAPGGFLTMGLIMGFLNY 192 >UniRef50_Q3A7X1 NADH:ubiquinone oxidoreductase, RnfE subunit-like n=3 Tax=Bacteria RepID=Q3A7X1_PELCD Length = 202 Score = 188 bits (478), Expect = 1e-46, Method: Composition-based stats. Identities = 96/210 (45%), Positives = 137/210 (65%), Gaps = 13/210 (6%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ + GLW+NN+ +LG+CP LAVT++A N LG+GLATT VL +N+ +S LR Sbjct: 2 KLWAIFSSGLWRNNAIFKLVLGMCPTLAVTTSAMNGLGMGLATTSVLLCSNMAVSALRTL 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 PA++RIP +++IIA+ V+ VQ+L+ AYAF LYQ+LGIFIPLIV NC+++GRAEAFA+++ Sbjct: 62 IPAKVRIPAFIVIIATFVTVVQLLMEAYAFELYQALGIFIPLIVVNCLILGRAEAFASRQ 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 SA DG +G+G T A+ +LG +RE++G G+LF G P Sbjct: 122 PLWASAADGAGMGLGFTLALVMLGGVRELLGAGSLFGLQMTGAG-------------FHP 168 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKK 212 LL +LPPGAF+ LG +LA R + Sbjct: 169 MLLMILPPGAFLALGFLLAAINGWKNRKRS 198 >UniRef50_Q73PG4 Na(+)-translocating NADH-quinone reductase, D subunit n=1 Tax=Treponema denticola RepID=Q73PG4_TREDE Length = 219 Score = 188 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 74/225 (32%), Positives = 120/225 (53%), Gaps = 15/225 (6%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + + G+ +NN LV ++GLC LAVT+ N LG+GLA T V+ ++ L IS R Sbjct: 2 KNLSIFTNGIIRNNPLLVLMIGLCSSLAVTTNILNGLGMGLAMTFVIVMSELIISIFRKL 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P +IRIP+++++IAS + V +L+ AY L ++G+FI LIV NCI++GR E+FA+K+ Sbjct: 62 IPQDIRIPVFIIVIASFTTIVDLLMQAYTPALADAMGLFIKLIVVNCIIMGRVESFASKE 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 P S LD +G+G T + ++ ++REI+G+G+L Sbjct: 122 SPGKSVLDALGMGVGYTIVLVLISAIREILGSGSLAGN--------------VFIPEAYH 167 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 PG F G+M++ L +++ +R + P E Sbjct: 168 IRFFANAPGGFFVFGIMISI-NLFAKKLLERPKKKIQSSPAPQTE 211 >UniRef50_A5N7M8 RnfE n=5 Tax=Clostridiales RepID=A5N7M8_CLOK5 Length = 213 Score = 188 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 71/220 (32%), Positives = 125/220 (56%), Gaps = 13/220 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M + ++ +GL N LV L LCP LA TS+A N L +GL V+T N +S ++ Sbjct: 1 MKGLWNIFKKGLVSENPILVLALSLCPALATTSSAVNGLTMGLCVLFVITCNNTVVSIIK 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + ++R+P+Y+ IA++V+ V++++ AYA LY LGI++ L+V I++ RAE FA+ Sbjct: 61 KFVNPKVRVPVYITCIATIVTVVELVLEAYAPELYSQLGIYLALVVVFAIILARAETFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K S DG +G G T A+ ++ +RE+ G GT+F ++ + Sbjct: 121 KNPVIPSFFDGLGMGCGFTLALVLISIIRELFGAGTVFGI-------------HVMWASY 167 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAE 220 +P L+ +LPPGAFI +G +++ + ++ ++K + + + Sbjct: 168 NPALIMILPPGAFILIGYLVSLVKVYNQHVEKVKMKKLEQ 207 >UniRef50_C7RDT4 Electron transport complex, RnfABCDGE type, E subunit n=7 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RDT4_ANAPD Length = 215 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 81/210 (38%), Positives = 123/210 (58%), Gaps = 14/210 (6%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + V ++G++ NN VQ +G+C +LA++S+ NA+G+G++ V+ ++NL IS LR+ Sbjct: 20 ENLGKVFIEGIFANNPVFVQTVGMCSVLAISSSLINAIGMGVSVIFVVVMSNLVISLLRN 79 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 + EIRIP +++IIA V+ VQM I AY L +SLGIFIPLIV NC+++ RAE FA+ Sbjct: 80 FISDEIRIPAFIVIIAGFVTMVQMAIKAYLPALDESLGIFIPLIVVNCLILARAEGFASS 139 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 GP S +DG G+G T A+ +L RE++G GTLF +I Sbjct: 140 HGPVASIVDGLGQGLGYTFAISLLAFFRELLGAGTLFGA--------------QIIPEAY 185 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMK 211 P +FI LG+++A I ++ K Sbjct: 186 TIGFLQQPASSFIVLGMLVAAFNAISKKRK 215 >UniRef50_B8FN67 Electron transport complex, RnfABCDGE type, E subunit n=8 Tax=Bacteria RepID=B8FN67_DESAA Length = 203 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 89/208 (42%), Positives = 121/208 (58%), Gaps = 7/208 (3%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + +GLW+ +LGLCP L VT+T N +G+GLATT VL NL +S LR Sbjct: 3 KTLTQEFTKGLWQEIPPFRLVLGLCPTLGVTTTVQNGVGMGLATTFVLVCANLLVSALRK 62 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 P ++RI ++++IA+ V+ V+ML+ A+ + LY LGIFIPLIV NCIV+GRAEAFA K Sbjct: 63 VIPPKVRIACFIVVIATFVTLVEMLMQAFTYPLYGMLGIFIPLIVVNCIVLGRAEAFAYK 122 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 S DG IG+G T A+ LG++RE+IG G + L + + Sbjct: 123 NPILPSLADGLGIGLGFTMALGALGAVREVIGTGCF-------TVPFGPTLTILSADWYT 175 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDER 209 PF + PGAFIGLGLML L+ + Sbjct: 176 PFSFMVQAPGAFIGLGLMLCLMNLVPSK 203 >UniRef50_D0L1N2 Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1N2_HALNC Length = 231 Score = 186 bits (472), Expect = 5e-46, Method: Composition-based stats. Identities = 96/219 (43%), Positives = 142/219 (64%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 +D+ VQGLWKNN LVQ+LG+CP++A+++T N+LGL +AT L + ++N S +RHW Sbjct: 5 SYRDLAVQGLWKNNPGLVQILGMCPMMAISNTVVNSLGLAMATILTMVVSNGLASVIRHW 64 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 E+R+P++VM++ASVV+ +++ +NAY LY LGIF+PLIVTNCIV+ R E FAA+ Sbjct: 65 VRPEVRLPVFVMVVASVVTVIELWMNAYLNTLYHVLGIFLPLIVTNCIVIARVEGFAARN 124 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 S DG +G+G + LG +RE++G GTL A L G A + + + Sbjct: 125 PVLPSLYDGLMMGLGFGLVLVALGVIRELLGFGTLLANAQQLFGPMAANWTIHVLPEQAH 184 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAER 221 FLLA+LPPGAF+ L +++A K I++ R A+ A Sbjct: 185 FLLAILPPGAFMALAILIAIKQAIEQCRAARLAQPVALE 223 >UniRef50_C0R023 SoxR-reducing system protein RsxE n=2 Tax=Brachyspira RepID=C0R023_BRAHW Length = 219 Score = 186 bits (472), Expect = 6e-46, Method: Composition-based stats. Identities = 80/212 (37%), Positives = 122/212 (57%), Gaps = 5/212 (2%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 V ++G+WKNN VQ+LG+CP LAVTS+ NA+G+ +AT VL ++ IS ++ Sbjct: 5 QVFMEGVWKNNPTFVQVLGMCPSLAVTSSVMNAIGMSVATIFVLVCSSALISLIKKIYAN 64 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 E+RI Y+++IA+ V+ +++ A + L +LG +IPLIV NCI++GRAEAFA K G Sbjct: 65 EVRIMGYIVVIAAFVTLTDIVMKAKFYTLSLALGPYIPLIVVNCIILGRAEAFANKNGII 124 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIF-----HTD 180 S D G+G A+ +L S+RE++GNGT + Sbjct: 125 PSIFDALGNGVGFFIALTLLASIREVLGNGTWLGFDIVGTLRGFFESAMPFALNAYNEIT 184 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKK 212 +P+++ ++ PGAF LG ++A K ID R K Sbjct: 185 TPWVVMIMAPGAFFTLGTLIAIKRAIDARGGK 216 >UniRef50_C8PN80 Na(+)-translocating NADH-quinone reductase subunit d (Na(+)-translocating nqr subunit d) n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PN80_9SPIO Length = 272 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 125/216 (57%), Gaps = 14/216 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M E + GL K N ++ ++GLC LA+T++ N +G+GLA T V+ L+ + IS R Sbjct: 1 MKEYVRIFTNGLVKENPLIMLMIGLCSALAITTSVANGIGMGLAMTFVIVLSEMIISMFR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P +IRIPI++++IAS + V +L+ A+ L +S+GIFI LIV NCI++GR E+FA+ Sbjct: 61 KFIPNDIRIPIFIIVIASFTTIVDLLMQAFLPELSESMGIFIKLIVVNCIIMGRVESFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 K+ P + D +G+G T + V+ ++RE++G+GT+ V + D Sbjct: 121 KESPIKAMADALGMGLGFTWVLVVMSAIRELLGSGTVLG--------------VRLLPDD 166 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAE 216 PG F GL++A YLI ++ K+R+ Sbjct: 167 YLIKFFANSPGGFFVFGLLIALTYLIQDQRKQRKIR 202 >UniRef50_B2A682 Electron transport complex, RnfABCDGE type, E subunit n=2 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A682_NATTJ Length = 206 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 6/209 (2%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + + QGL K N QLLGLCP LAVT TA N+LGLG AT VL N+ IS +++ Sbjct: 2 KFSEAFTQGLLKENGLYRQLLGLCPALAVTQTAMNSLGLGAATMAVLLAANIVISLVKNL 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P +IRIP Y++IIA+ V+ V M + A+ L+ +LGIFIPLIVTNC+++GRAEAFA+K+ Sbjct: 62 IPKKIRIPSYIVIIATFVTIVDMFLEAFTPDLHAALGIFIPLIVTNCLILGRAEAFASKE 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 + D +G+G T + LG +RE+ G G+LF L P Sbjct: 122 KVTSAIGDALGMGIGFTLGLLSLGVVRELFGKGSLFGW------PVLHELFGAFGLEFQP 175 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMK 211 L+ + P GAF LG++LA ++ +R++ Sbjct: 176 ALIFIQPAGAFFALGILLALMNIVYKRLQ 204 >UniRef50_B7UZU0 Na(+)-translocating NADH-quinone reductase subunit D n=228 Tax=Bacteria RepID=NQRD_PSEA8 Length = 224 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 12/225 (5%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 I++V+ +++NN +Q+LG+C LAVTS A + +A TLV +NL IS +R Sbjct: 8 IREVLFNPVFQNNPIGLQILGICSALAVTSNLKTATVMAIALTLVTGFSNLFISMIRRQI 67 Query: 64 PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKG 123 P+ IR+ + ++IIAS+V V ++ AYA+ L + L +F+ LI+TNCIV+GRAEAFA Sbjct: 68 PSSIRMIVQMVIIASLVIVVDQVLKAYAYSLSKQLSVFVGLIITNCIVMGRAEAFAMANP 127 Query: 124 PALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPF 183 P +S DG G+G + + VLG +RE+ G G L+ + + P Sbjct: 128 PLVSFFDGIGNGLGYSAMLLVLGFVRELFGAGKLYGISVLPTVNDGGW--------YQPN 179 Query: 184 LLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGET 228 L +LPP AF +GL++ KK + EA + P + Sbjct: 180 GLLLLPPSAFFLIGLIIWALRTW----KKDQVEAPTYKMAPQVSS 220 >UniRef50_A4SQL7 Na(+)-translocating NADH-quinone reductase subunit D n=132 Tax=Bacteria RepID=NQRD_AERS4 Length = 210 Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 118/213 (55%), Gaps = 8/213 (3%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 SE+K +++ + NN +Q+LG+C LAVTS A + LA T V +NL IS +R+ Sbjct: 5 SEMKKLLLTPVLGNNPIALQVLGVCSALAVTSQMKTAFVMTLAVTAVTAFSNLFISLIRN 64 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 P +RI + +IAS+V V ++ AYA+ + + L +F+ LI+TNCIV+GRAEA+A K Sbjct: 65 QIPNSVRIIAQMAVIASLVIVVDQVLKAYAYEISKQLSVFVGLIITNCIVMGRAEAYAMK 124 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 P S LDG G+G + + ++REI+G+GT F L + Sbjct: 125 SAPLPSFLDGIGNGLGYGAVLLTVATVREILGSGTWFGIELLPLVNNGGW--------YV 176 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRR 214 P L +LPP AF +GL++ G D + + + Sbjct: 177 PNGLLLLPPSAFFIIGLIIWGVRTRDPKQVEAK 209 >UniRef50_Q5P1B5 NADH:ubiquinone oxidoreductase, subunit RnfE n=3 Tax=Rhodocyclaceae RepID=Q5P1B5_AZOSE Length = 232 Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats. Identities = 96/218 (44%), Positives = 141/218 (64%), Gaps = 6/218 (2%) Query: 10 QGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRI 69 GLWK N+ LVQLLGLCP+LAV+++ NA+ LGLAT +V+ ++N +++LR++ P EIRI Sbjct: 12 NGLWKQNTGLVQLLGLCPILAVSTSVVNAVSLGLATVVVMAVSNFAVASLRNFIPYEIRI 71 Query: 70 PIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSAL 129 P++++IIA++ + V + NAY LY LGIFIPLIVTNCIV+ R EA+AAK P S + Sbjct: 72 PVFILIIAALTTVVDLAFNAYLHDLYLVLGIFIPLIVTNCIVLARVEAYAAKNDPVASTV 131 Query: 130 DGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLP 189 DG +G+G + VLG +RE++G+GTLF G + ++ + + FL+ +LP Sbjct: 132 DGIMMGLGLVWLLGVLGGIRELVGSGTLFSGIEMVIPGLSPLS--VFGDDYPGFLIGVLP 189 Query: 190 PGAFIGLGLMLAGKYLIDERMKKRRAEAAAERALPNGE 227 PGAF LG ++A R++ R A R + E Sbjct: 190 PGAFFALGCLIALSN----RIRMRAAAGKPARPASDSE 223 >UniRef50_A6TT08 RnfA-Nqr electron transport subunit n=8 Tax=Bacteria RepID=A6TT08_ALKMQ Length = 209 Score = 173 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 64/220 (29%), Positives = 116/220 (52%), Gaps = 13/220 (5%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + K + G+ +N Q+LG+C LAVT+ N+L +G+ V L++ T+S LR Sbjct: 3 KKTKRIFQLGILNDNPVFRQILGICSALAVTNLMINSLVMGIGLIFVTALSSFTVSVLRK 62 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 TP IR+ + +II++ V V +++ AY + +LG ++ LI+TNCI++GR E++A Sbjct: 63 HTPRHIRMMVQTLIISAYVIIVDIVLKAYYPSMSDALGPYVGLIITNCIIMGRCESYAQN 122 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 P+L+ LDG + G+G T + ++ RE++G G++F + Sbjct: 123 NPPSLAFLDGIASGLGYTFVLLLIAFFRELLGFGSIFGITV-------------MGAWWP 169 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAER 221 ++ ++PPGAF LG+++ + +K + A Sbjct: 170 RWIFMIMPPGAFFMLGILIWVMNSLVPSEEKETSVAGGAN 209 >UniRef50_A8ZSV5 RnfA-Nqr electron transport subunit n=2 Tax=Desulfobacteraceae RepID=A8ZSV5_DESOH Length = 207 Score = 173 bits (438), Expect = 6e-42, Method: Composition-based stats. Identities = 63/211 (29%), Positives = 101/211 (47%), Gaps = 13/211 (6%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 + +QG+ N QLLGLCP+LAVT +A+ + A VL N+ IS +R+ Sbjct: 8 MERFLQGIIPENPVYRQLLGLCPVLAVTGNMQSAMTMAGAVLFVLFCANVMISLIRNILK 67 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 +RI I+ + IA+ V+ V + AY + + ++LG +IPLI+ NCI++ R E A+K+ Sbjct: 68 PHLRIVIFTLTIATFVTIVDRFLAAYMYNMSKALGPYIPLIIVNCIIICRCEVCASKQSV 127 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 + D +G A+ + ++REI+G G F ++ Sbjct: 128 FHAGADAIGQSLGFALALASIATVREILGTGMFFGLPVLP-------------DVWPDWV 174 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRA 215 + LPPGAF GL+L K+ Sbjct: 175 IMALPPGAFFTFGLLLGLVNWFTANRAKKEK 205 >UniRef50_D1VUK9 Electron transport complex protein RnfE n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUK9_9FIRM Length = 199 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 75/209 (35%), Positives = 117/209 (55%), Gaps = 12/209 (5%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ V + KNN +QL+GLC +LA+T+ N++ +G+A T VL ++N +S LR+ Sbjct: 2 KLSKVFTDAMLKNNPTFMQLIGLCSVLAITNNVINSVSMGIAVTFVLIMSNGVVSALRNV 61 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 P +IRIP ++++IA+ V+ VQM++ AYA +Y +LGIF+PLIV NC ++G AE FA K Sbjct: 62 IPDKIRIPCFIVVIATFVTLVQMILQAYATPIYLALGIFLPLIVVNCCILGEAEGFAYKN 121 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 S +DG G+G T A+ ++G +RE G G+L + Sbjct: 122 KLIPSLVDGLGTGVGYTLAVLIMGVVREFFGYGSLLNIQIIPK------------EIYPG 169 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMK 211 + P GAFI LG ++A + R Sbjct: 170 IGILAAPAGAFILLGFVIAAFKNLLTRRA 198 >UniRef50_D2MN20 Rnf-Nqr subunit, membrane protein (Fragment) n=4 Tax=Erysipelotrichaceae RepID=D2MN20_9FIRM Length = 216 Score = 172 bits (436), Expect = 9e-42, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 113/211 (53%), Gaps = 3/211 (1%) Query: 8 IVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEI 67 + L + LGLC LA++++ NALG+G+ VL L+N+ +S +RH TP +I Sbjct: 9 FLGRLISESPVFSMYLGLCSTLAISTSLNNALGMGIGVIFVLVLSNMLVSMVRHITPDDI 68 Query: 68 RIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALS 127 IP+Y+ IIA++V+ + ML++A+ L+ +LG F+ LI NCI++GRAEAFA K S Sbjct: 69 HIPVYITIIATLVTVLSMLMHAFTPTLFTALGAFLDLITVNCIILGRAEAFACKNNVVDS 128 Query: 128 ALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAM 187 DGF +G+ T A+ + +R+I+G G L + + + + +V++ L Sbjct: 129 VKDGFQMGLAYTGALLCMAVIRQIVGTGIL---SLSNPFTDQLIFKVQLIPVGFEIPLFT 185 Query: 188 LPPGAFIGLGLMLAGKYLIDERMKKRRAEAA 218 GAFI + A R+ + Sbjct: 186 EQFGAFITFACIAALVANYKNRLATQGKRGK 216 >UniRef50_Q12W80 Electron transport complex protein rnfE n=2 Tax=Methanosarcinaceae RepID=Q12W80_METBU Length = 203 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 11/211 (5%) Query: 5 KDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP 64 ++G+ K+N +LGLCP LAVT++ NA+G+ T VL +NL +S LR P Sbjct: 4 LSEFIRGITKDNPIFGLVLGLCPTLAVTTSIDNAIGMSAGTAFVLICSNLMVSGLRKQIP 63 Query: 65 AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGP 124 A +R+PI+++IIA+ VS V+M++ AY +Y +LG+FIPLIV NCI++GRAEA+A K Sbjct: 64 ASVRLPIFILIIATFVSIVKMVMEAYFPPMYAALGVFIPLIVVNCIIIGRAEAYANKNNM 123 Query: 125 ALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFL 184 S +D G + ++G +RE++G G + L+ +P Sbjct: 124 FYSLIDALGSSAGFLLVLVLIGGIRELLGTGGIAIFGTQLVSIPI-----------NPIT 172 Query: 185 LAMLPPGAFIGLGLMLAGKYLIDERMKKRRA 215 +L PGAF+ +G+++A + R Sbjct: 173 FMILSPGAFLTIGILMAIVNHRRAKKLARGG 203 >UniRef50_Q7VNU6 Na(+)-translocating NADH-quinone reductase subunit D n=16 Tax=Bacteria RepID=NQRD_HAEDU Length = 207 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 114/212 (53%), Gaps = 8/212 (3%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + +K +++ + NN +Q+LG+C LAVT+ A + +A +LV +++ IS +R+ Sbjct: 4 NNLKKLLLSPISDNNPIALQILGICSALAVTTQLQTAFVMAIAVSLVTAFSSMFISMIRN 63 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 + P IRI + + IIAS+V V ++ AY + L + L +F+ LI+TNCIV+GRAEAFA K Sbjct: 64 YIPNSIRIIVQMAIIASLVILVDQILRAYVYDLSKQLSVFVGLIITNCIVMGRAEAFAMK 123 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 P S +DG G+G + ++ LRE+IG+G +F + ++ Sbjct: 124 SAPLESFVDGIGNGLGYGAMLVIVAFLRELIGSGKIFGVTV--------LQTIQDGGWYQ 175 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKR 213 L +L P AF +G ++ ++ Sbjct: 176 ANGLFLLAPSAFFIIGFVIWAIRTWKPEQVEK 207 >UniRef50_A1F5P3 Electron transport complex protein RnfE n=1 Tax=Vibrio cholerae 2740-80 RepID=A1F5P3_VIBCH Length = 177 Score = 167 bits (423), Expect = 3e-40, Method: Composition-based stats. Identities = 97/150 (64%), Positives = 125/150 (83%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E + +++ G+W NN ALVQLLGLCPLLAV+ST TNALGLG+AT LVL +N+T+S +R Sbjct: 1 MNENRTLMLNGMWNNNPALVQLLGLCPLLAVSSTVTNALGLGIATLLVLVGSNVTVSLVR 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 + P E+RIP++VMIIAS+V+ VQ+L+NAYA+GLY SLGIFIPLIVTNCI++GRAEAFA+ Sbjct: 61 DYVPKEVRIPVFVMIIASLVTCVQLLMNAYAYGLYLSLGIFIPLIVTNCIIIGRAEAFAS 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLRE 150 K +ALDGF +G+G T + VLGSLRE Sbjct: 121 KNDVLPAALDGFWMGLGMTSVLVVLGSLRE 150 >UniRef50_A9NGU8 Na+-transporting NADH:ubiquinone oxidoreductase subunit D n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU8_ACHLI Length = 219 Score = 163 bits (412), Expect = 6e-39, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 112/211 (53%), Gaps = 12/211 (5%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + ++ G+ + N +V +LG+C LAVT+ NA+ +G+ T V+ +++ +S +R+ Sbjct: 20 KKWFLILKNGISEENPIIVSVLGICSALAVTNRVENAIVMGIGVTFVIMASSMMVSMMRN 79 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 P+++R+ +++II+ VQM + A+ + +LG + LI+TNCIV+GRAEAFA K Sbjct: 80 LIPSKVRMVAFMVIISMFTIVVQMFLQAFLPVVAANLGAYTGLIITNCIVMGRAEAFAIK 139 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 + +DGF+ GMG T + + ++RE + GT + +W Sbjct: 140 NPVKYTIIDGFANGMGYTLVLIAIAAVREPLAFGTFLGMSIPGFDNWIN----------- 188 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKK 212 + + L PG F L L+ + ++ ++ Sbjct: 189 -WNVMALAPGGFFVLTLLAWLVRTLTKKYEE 218 >UniRef50_Q3KM82 Na(+)-translocating NADH-quinone reductase subunit D n=15 Tax=Chlamydiales RepID=NQRD_CHLTA Length = 213 Score = 160 bits (405), Expect = 4e-38, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 3/212 (1%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 LW NN L+ +LG+C LAVT+T T AL +G A + V ++ +S LR Sbjct: 5 KSYLTYFTDALWINNQPLIAILGICSALAVTTTVTTALTMGFAVSFVTGCSSFVVSLLRK 64 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 TP +R+ ++II+ V + + A+ F + ++L +F+ LI+TNCIV+GRAE+ A Sbjct: 65 ITPESVRMIAQLIIISLFVILIDQFLKAFFFTISKTLSVFVGLIITNCIVMGRAESMARH 124 Query: 122 KGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDS 181 P + LDG G+G + + +RE+ G GT+ + Sbjct: 125 VSPIPAFLDGLGSGLGYGWVLVCISIIRELFGFGTILGFRVIPEILYTSAAHP---DGYE 181 Query: 182 PFLLAMLPPGAFIGLGLMLAGKYLIDERMKKR 213 L +L P AF LG+M+ +I KR Sbjct: 182 NLGLMVLAPSAFFLLGIMIWIVNIIRAPKTKR 213 >UniRef50_Q2LXT9 Sodium-translocating NADH-quinone reductase subunit D n=3 Tax=Deltaproteobacteria RepID=Q2LXT9_SYNAS Length = 214 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 15/213 (7%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 +++ G+ N L +CP + +T++ N L LG A V ++ TI+ ++++ Sbjct: 17 ELLFNGILLENPIFRLALSMCPAVGLTTSIKNGLLLGTAVLFVQVFSSCTIAAIKNFIHP 76 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 IRIP Y + IA+ V+ + +++ AY Y+ +G+F+ LIV I+ R E FA K Sbjct: 77 RIRIPTYTLTIATWVTVIDLVLAAYVPEAYKQVGLFVKLIVAFAIITMRLEMFACKNTVT 136 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLL 185 S DG +G+G M +G +RE++G GTL P L Sbjct: 137 SSFFDGVGMGIGFMVGMVTIGFVRELLGAGTLLGYDVL---------------GFKPLLF 181 Query: 186 AMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAA 218 +LP F +G+M+A I+ + + + Sbjct: 182 FVLPAAGFFCVGIMMAMFNYIEVVFNRSKERKS 214 >UniRef50_D1PJN1 Putative electron transport complex protein RnfE n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJN1_9FIRM Length = 405 Score = 150 bits (380), Expect = 3e-35, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 16/212 (7%) Query: 6 DVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPA 65 + +W +N +V LGL P++ AL L +A+ L++T T + + H + Sbjct: 200 KIRSDHIWLSNPVMVCGLGLAPVVGAALDGERALILCVASLLLITFTRVLAVAVCHLSGN 259 Query: 66 EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPA 125 R IY A + V +L+ + +LGI++P++V +V R E FA + Sbjct: 260 RFRPIIYSYAAALLYIPVYILLYEFFGNSLTALGIYLPILVVEPAIVKRME-FAELEPLR 318 Query: 126 LSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLL 185 + GF+ G+G A+ ++G LRE + +GT+F + L Sbjct: 319 DALRHGFNNGIGMCVALLIVGCLREFLASGTVFGHEVIHMAL---------------LPL 363 Query: 186 AMLPPGAFIGLGLMLAGKYLIDERMKKRRAEA 217 A P G F+ +G++ A + + E Sbjct: 364 AAQPAGGFVLVGVIAAVWCAVANAYTDYKREE 395 >UniRef50_B0MP92 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP92_9FIRM Length = 256 Score = 135 bits (339), Expect = 2e-30, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 83/219 (37%), Gaps = 16/219 (7%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + ++ GL K N L+ + P++ +T + + LA ++ LT +T S + Sbjct: 18 KFTRDLIDGLAKQNVVLMTGIVNAPVIIAATTFKKGVVIALAFAIISFLTIVTCSFVPKK 77 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 +R+ IY ++ + +L+ + +GI++PLI+TN ++ + E+ + Sbjct: 78 IVYTLRVIIYALVGSVYYIPTVLLLEQIFPLTVELIGIYMPLIITNALIFSKTESRFYLE 137 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 +D G + G RE+I GT D Sbjct: 138 DKLKMIIDVIFFIAGFGAVCVLTGGFRELICFGTFAGIKL----------------FDFK 181 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAAER 221 P G FI +G+M + ++ RR +E Sbjct: 182 IAAFESPFGGFILVGIMAGMFRALYNYLRNRRIRLNSEE 220 >UniRef50_Q2NSZ5 Electron transport complex protein rnfA n=11 Tax=Gammaproteobacteria RepID=RNFA_SODGM Length = 193 Score = 133 bits (334), Expect = 6e-30, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 85/159 (53%), Gaps = 6/159 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ + + + NN LV+ LGLCP + V+ ALG+G+ATT V+TL ++ + Sbjct: 1 MNGYLMLFIGTVLVNNFVLVKFLGLCPFMGVSKKVETALGMGMATTFVMTLASICAWLIN 60 Query: 61 HWTP-----AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + +R ++ IIA VV ++++ + LY+ LGIF+PLI TNC V+G A Sbjct: 61 DFILLPLNIPYLRTLAFIFIIAVVVQFTELVVRKTSPALYRLLGIFLPLITTNCAVLGVA 120 Query: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREIIG 153 + L SAL GFS +G + M + ++RE + Sbjct: 121 LLNVNENHNFLQSALYGFSAAVGFSLVMVLFAAIRERLA 159 >UniRef50_A6NPN3 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN3_9BACE Length = 240 Score = 132 bits (333), Expect = 7e-30, Method: Composition-based stats. Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 14/213 (6%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + + +GL +N A++ LL + +L ++T LG GLA T VL TNL + LR Sbjct: 41 RVVSLFRRGLALHNPAVILLLLVAAVLPCSATLPGGLGTGLAMTAVLVCTNLAGAILRPI 100 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 +RIP Y++ A++++A +++ A GL +F+ N ++ R AF+ + Sbjct: 101 ASPALRIPCYLIAAAAILTAAGLVLQACFPGLTGCAPLFLLPAAVNAALLARRGAFSRRF 160 Query: 123 GPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSP 182 P +A+DG + G+G T A+ VL +LRE++G GTL+ A + P Sbjct: 161 TPGYAAVDGLAAGVGFTIALTVLSALRELLGKGTLWGAA--------------LPGELPP 206 Query: 183 FLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRA 215 LLA P G F+ L + A R+++R Sbjct: 207 VLLAAAPCGGFLLLSCLAALVRWASARLERREK 239 >UniRef50_D2RN92 Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Acidaminococcus RepID=D2RN92_ACIFE Length = 191 Score = 131 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 37/158 (23%), Positives = 77/158 (48%), Gaps = 6/158 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M ++ ++ +N L + LG+C L V+ N++G+ A + V+ L+ + Sbjct: 1 MHSTFGILFSSIFVSNIILSRFLGMCSFLGVSKNFKNSVGMSAAVSFVMLLSTMLSYACY 60 Query: 61 HWTP-----AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 H ++ ++++ IA++V V+M + L++++GI++PLI TNC ++G A Sbjct: 61 HLLLVPYHLEYLKTLVFILAIATLVQLVEMFMKKAMPSLHKAMGIYLPLITTNCAILGIA 120 Query: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREII 152 L S ++ +G T A+ + +RE + Sbjct: 121 LINVESNYSFLDSCVNSIGTSIGYTMAILLFSCIRERL 158 >UniRef50_A7FHZ1 Electron transport complex protein rnfA n=360 Tax=Bacteria RepID=RNFA_YERP3 Length = 193 Score = 129 bits (324), Expect = 8e-29, Method: Composition-based stats. Identities = 53/159 (33%), Positives = 86/159 (54%), Gaps = 6/159 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E + V + NN LV+ LGLCP + V+ A+G+GLATT VLTL ++ + Sbjct: 1 MTEYLLLFVGTVLVNNFVLVKFLGLCPFMGVSKKLETAIGMGLATTFVLTLASVCAWMVN 60 Query: 61 HWTPA-----EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + +R ++++IA VV ++++ + LY+ LGIF+PLI TNC V+G A Sbjct: 61 SFILLPLGLIYLRTLAFILVIAVVVQFTELVVRKTSPTLYRLLGIFLPLITTNCAVLGVA 120 Query: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREIIG 153 + + SA+ GFS G + M + ++RE + Sbjct: 121 LLNVNQSHNFMQSAVYGFSAAAGFSLVMVLFAAIRERLA 159 >UniRef50_UPI0001C372EE electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372EE Length = 204 Score = 129 bits (324), Expect = 9e-29, Method: Composition-based stats. Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 15/219 (6%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ K+ + G+ +N L L+ + P++ + NAL L A + ++ + S + Sbjct: 1 MNNRKNSVFDGILGDNIILSSLMVISPIIICGDSVKNALSLIYAFNSMTFISLIIGSFVP 60 Query: 61 HWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAA 120 P IRI IY +I + V V+ + +GI+ PL+ N ++V ++EA Sbjct: 61 KKIPYTIRIIIYAIISSLVFIPVRWFAVEFYPDSIHRIGIYYPLLAVNSLIVLQSEAKFY 120 Query: 121 KKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 + + +G M G++RE GT+ ++ + Sbjct: 121 RMKKGRMIISLVFYIIGFDLVMLFTGAVREFFAYGTILS---------------KVADIN 165 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAAA 219 + +P G FI LGLM I + +AE+ Sbjct: 166 TTVSGLGMPFGGFIFLGLMCGVYRKIRSSVHSTKAESEE 204 >UniRef50_C1DEF3 Electron transport complex protein rnfA n=60 Tax=Bacteria RepID=RNFA_AZOVD Length = 194 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 7/160 (4%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E+ ++V + NN LVQ LGLCP + V+ A+GL LATT VLTL + L+ Sbjct: 1 MTELVLILVGAILVNNFVLVQFLGLCPFMGVSKRIETAIGLALATTFVLTLAAMCSYLLQ 60 Query: 61 HWT-----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + +R ++++IA VV +ML+N + LY+ LGIF+PLI TNCIV+G A Sbjct: 61 RYVLVPLDLEYLRTIGFILVIAVVVQFTEMLVNKTSPLLYRVLGIFLPLITTNCIVLGVA 120 Query: 116 EAFAAK--KGPALSALDGFSIGMGATCAMFVLGSLREIIG 153 A K G S ++GF G+G + + + ++RE I Sbjct: 121 LLNANKAGYGFLESGINGFGAGLGFSLVLVLFAAMRERIA 160 >UniRef50_B7UWJ4 Electron transport complex protein rnfA n=85 Tax=Bacteria RepID=RNFA_PSEA8 Length = 194 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 60/160 (37%), Positives = 88/160 (55%), Gaps = 7/160 (4%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E+ ++V + NN LVQ LGLCP + V+ A+GL LATT VLTL + L+ Sbjct: 1 MTELALILVSAILVNNFVLVQFLGLCPFMGVSRKIETAIGLSLATTFVLTLAAMCSHILQ 60 Query: 61 HWTP-----AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + +R ++++IA VV +ML+ + LY+ LGIF+PLI TNCIV+G A Sbjct: 61 RYVLRPLDLEYLRTIGFILVIAVVVQFTEMLVKKTSPLLYRVLGIFLPLITTNCIVLGVA 120 Query: 116 EAFAAK--KGPALSALDGFSIGMGATCAMFVLGSLREIIG 153 A K G + GF G+G + + + +LRE I Sbjct: 121 LLNANKAEYGFLQATTQGFGAGLGFSLVLVLFAALRERIA 160 >UniRef50_B8CY11 Electron transport complex, RnfABCDGE type, A subunit n=17 Tax=Bacteria RepID=B8CY11_HALOH Length = 197 Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 50/157 (31%), Positives = 83/157 (52%), Gaps = 6/157 (3%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + I + + + NN LV+ LG+CP L V+ A +GLATT V+T+T + Sbjct: 6 TRILLIFISTVLVNNFILVRFLGICPFLGVSRHVETAFSMGLATTFVMTMTGAATWLINT 65 Query: 62 WT-----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAE 116 + ++ ++++IAS+V V+M I + LY++LGI++PLI TNC ++G A Sbjct: 66 YILEMFNLPFLQYVSFIIVIASLVQFVEMFIKKTSPVLYKALGIYLPLITTNCAILGLAL 125 Query: 117 AFAAKKGPA-LSALDGFSIGMGATCAMFVLGSLREII 152 S + G S G+G T A+ ++ LRE + Sbjct: 126 LIPLNGYNFIESIVFGLSAGVGFTLAIVLMAGLRETL 162 >UniRef50_A8ZY02 Electron transport complex, RnfABCDGE type, A subunit n=3 Tax=Bacteria RepID=A8ZY02_DESOH Length = 191 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 6/163 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E + + + NN L Q LG CP L + A+G+ +A VL + + + Sbjct: 1 MTEYILLAISCILINNILLAQFLGNCPFLGTSKKMETAVGMSMAVVFVLVMAGMITWCVD 60 Query: 61 HWTPAEI-----RIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 + + R ++++IAS+V V+M + LY LGIF+PLI TNC V+G Sbjct: 61 VFLLKWLDLEFLRTLAFILVIASLVQFVEMFLKKSIPALYAGLGIFLPLITTNCAVMGAC 120 Query: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREIIGNGTL 157 ++ L + + FS +G A+ + +RE I G + Sbjct: 121 LINIKEEYNFLQALVASFSYAVGFGLALILFAGVRERINLGKV 163 >UniRef50_C5SAZ5 Electron transport complex, RnfABCDGE type, A subunit n=2 Tax=Gammaproteobacteria RepID=C5SAZ5_CHRVI Length = 196 Score = 127 bits (319), Expect = 4e-28, Method: Composition-based stats. Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 5/155 (3%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNL----TISTL 59 + + + NN L LG+CP L V+ A +GLAT V+ +++ L Sbjct: 6 LSLIFLNAAIVNNFVLALFLGICPFLGVSGKKETAWNMGLATMFVMLVSSAAAYGINWLL 65 Query: 60 RHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFA 119 +R+ Y+ +IAS V V+M + + L++SLGIF+PLI TNC ++G A Sbjct: 66 TQLGLEFLRLICYIAVIASAVQLVEMFVKKTSPALFRSLGIFLPLITTNCAILGLALFQT 125 Query: 120 AKKGPAL-SALDGFSIGMGATCAMFVLGSLREIIG 153 +K+ + S + G+G T A+ ++ LRE + Sbjct: 126 SKEYDFVQSLVYALGAGVGFTLALMLMAGLREKLA 160 >UniRef50_A6DRQ4 Na(+)-translocating NADH-quinone reductase subunit E n=3 Tax=Bacteria RepID=A6DRQ4_9BACT Length = 245 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 20/167 (11%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 + ++ ++ ++ N LG+C LAV+ ++G+G A V T+T + ++ Sbjct: 1 MLELALKAIFIENMIFALFLGMCSYLAVSKKVDTSVGMGCAVWFVTTVTCPASWLVSNYF 60 Query: 64 PA-------------------EIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPL 104 + Y+ +IA++V ++M I + LY SLG+F+PL Sbjct: 61 LKPGEQNLIGQLFNKPDLDLTFLTFVSYIALIAAMVQFLEMFIEKISAKLYGSLGVFLPL 120 Query: 105 IVTNCIVVGRAEAFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLRE 150 I NC ++G + K +A+ GFS G G A+ V ++RE Sbjct: 121 IAVNCAILGGSLMMNDKGFTFPEAAMFGFSGGFGWLMAIVVFAAIRE 167 >UniRef50_Q3KM81 Na(+)-translocating NADH-quinone reductase subunit E n=40 Tax=Bacteria RepID=NQRE_CHLTA Length = 244 Score = 123 bits (309), Expect = 5e-27, Method: Composition-based stats. Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 18/170 (10%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + + +Q + N L LG+C LA +S + A GLG++ LVLT+T + ++ Sbjct: 10 NLLGIFLQATFIQNILLSTFLGMCSYLACSSRLSTANGLGMSVALVLTITGSINWLVHYF 69 Query: 63 T-----------------PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLI 105 + + + +++++IA+ +++L+ ++ LY +LGIF+PLI Sbjct: 70 ITKPGALAWLSPALANIDLSFLELIMFIVVIAAFTQILEVLLERFSRNLYLALGIFLPLI 129 Query: 106 VTNCIVVGRAEAFAAKKGPA-LSALDGFSIGMGATCAMFVLGSLREIIGN 154 NC ++G + P + G G A+ + ++RE + Sbjct: 130 AVNCAILGGVLFGITRNYPFLPMVVFSLGSGCGWWLAIVLFATIREKLAY 179 >UniRef50_A6L724 Na+-transporting NADH:ubiquinone oxidoreductase, electron transport complex protein rnfA n=18 Tax=Bacteria RepID=A6L724_BACV8 Length = 200 Score = 122 bits (307), Expect = 9e-27, Method: Composition-based stats. Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 6/156 (3%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 E + + ++ NN L Q LG+CP L V+ A G+G A VLT+ + ++ + Sbjct: 2 EYILIFITAIFVNNIVLSQFLGICPFLGVSKKVETATGMGAAVAFVLTIATIVTYLIQKF 61 Query: 63 T-----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEA 117 ++ ++++IA++V V++++ + LYQ+LG+F+PLI TNC ++G A Sbjct: 62 VLDAFGLEYLQTIAFILVIAALVQMVEIILKKVSPALYQALGVFLPLITTNCCILGVAIL 121 Query: 118 FAAKKGPALS-ALDGFSIGMGATCAMFVLGSLREII 152 K L+ + FS +G AM + +RE + Sbjct: 122 VIQKDFDLLTGVVYAFSTALGFALAMVLFAGIREQL 157 >UniRef50_Q2LXT8 Sodium-translocating NADH-quinone reductase subunit E n=3 Tax=Deltaproteobacteria RepID=Q2LXT8_SYNAS Length = 323 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 28/155 (18%), Positives = 75/155 (48%), Gaps = 6/155 (3%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 + +++ + NN + LGLC + + A+G+G+ T+V+ ++ + L + Sbjct: 134 LFSILIGAMLINNYVFTKYLGLCVFIGTSRKKDTAVGMGITFTIVMVVSAMISWFLYQYV 193 Query: 64 -----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 +++ +++ +++ V AV ++ L+++ G+++ L++ NC+++ Sbjct: 194 LKPYRLDYLQVVVFIGLVSLTVQAVDTVLRKVNPALFKAFGVYLVLVIANCVIIAVPLTL 253 Query: 119 AAKKGP-ALSALDGFSIGMGATCAMFVLGSLREII 152 A+ + S + G G A+F++ + RE + Sbjct: 254 ASNEYNAFESFMLALGAGGGFLLALFLMSASRERL 288 >UniRef50_D2MN21 Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Bulleidia extructa W1219 RepID=D2MN21_9FIRM Length = 190 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 42/156 (26%), Positives = 84/156 (53%), Gaps = 6/156 (3%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ +++ GL+ NN L + LG+CP + V++ +ALG+G+A V+ +++ T+ H+ Sbjct: 2 DLFTLLIGGLFINNIILTKFLGMCPFMGVSTKLESALGMGVAVIFVIFGSSVIAWTIYHY 61 Query: 63 TP-----AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEA 117 + + ++++IA+ V V++ I LY+SLGI++PLI TNC V+ A+ Sbjct: 62 VLVPFHIEYMELITFILLIAAFVQFVELFIKKSTPALYKSLGIYLPLITTNCAVLFVAQD 121 Query: 118 F-AAKKGPALSALDGFSIGMGATCAMFVLGSLREII 152 A + ++ +I G + + S+R + Sbjct: 122 NIAQGYDLVHTMVNSIAIPAGFALMLLIFASIRTRL 157 >UniRef50_C8WMP5 Electron transport complex, RnfABCDGE type, A subunit n=30 Tax=Bacteria RepID=C8WMP5_EGGLE Length = 197 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 5/157 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+E ++ + NN LV+ LG+CP L V+ +A G+G A T+V+ L L+ Sbjct: 1 MAEYAAILFSMILVNNYVLVKFLGICPFLGVSKKLDSAAGMGCAVTVVMVLATAVTWPLQ 60 Query: 61 HWT----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA- 115 ++ ++++IA +V ++++I + L+++LG+++PLI TNC V+G Sbjct: 61 QLLNALGLGYLQTIAFILVIAVLVQMLEIVIRYFLPALHEALGVYLPLITTNCAVLGVTI 120 Query: 116 EAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREII 152 A + + G+G AM + +R + Sbjct: 121 LAVDEGYNYPEALVAALGAGLGFLLAMVLFSGVRRRV 157 >UniRef50_A7HKQ4 RnfA-Nqr electron transport subunit n=8 Tax=Bacteria RepID=A7HKQ4_FERNB Length = 197 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 6/153 (3%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + ++ +N L LG+C ++++ ++ GLGLA TLV+T+T + + Sbjct: 6 NPFVLFFASIFTSNILLTNFLGMCSFISISKDIKSSNGLGLAVTLVMTITTAINWIIEKY 65 Query: 63 T-----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEA 117 +R +Y+++IA+VV ++M+I+ + LY LGIF+PLI NC ++G A Sbjct: 66 VIAPLDLGYLRYILYIIVIAAVVQVLEMIIDRVSPNLYMVLGIFLPLITVNCAILGVALF 125 Query: 118 FAAKKGPAL-SALDGFSIGMGATCAMFVLGSLR 149 + L S G GMG A+ +L ++R Sbjct: 126 MQLRNYTFLQSVFFGLGSGMGWWLAIVLLAAIR 158 >UniRef50_A9NGU9 Na+-transporting NADH:ubiquinone oxidoreductase subunit E n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NGU9_ACHLI Length = 194 Score = 118 bits (295), Expect = 2e-25, Method: Composition-based stats. Identities = 43/153 (28%), Positives = 87/153 (56%), Gaps = 5/153 (3%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 E+ ++ + + NN AL+ +LG+C L+AV+++ N++ +G+A V+T+T + + Sbjct: 2 ELIELFLASILSNNIALIFILGMCSLIAVSTSIKNSVNMGVAVIFVVTITAIINWPIYEL 61 Query: 63 T----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 ++ + +++++IA+ V ++M + Y +Y+S GIF+PLI NCIV+ + F Sbjct: 62 LKATGTEQLALLVFIIVIAAFVQFLEMFLAKYFPKIYESFGIFLPLITVNCIVLSVSLFF 121 Query: 119 AAKKGPAL-SALDGFSIGMGATCAMFVLGSLRE 150 + L + + F +G T AM +L +R+ Sbjct: 122 QQRNYDFLQTTVFAFGSSVGWTFAMILLAGVRQ 154 >UniRef50_B5YE59 Na(+)-translocating NADH-quinone reductase subunit d n=3 Tax=Bacteria RepID=B5YE59_DICT6 Length = 195 Score = 117 bits (294), Expect = 3e-25, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 81/158 (51%), Gaps = 6/158 (3%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ + + NN ++ L LCP + +++ ++G+G A T V+ + ++ + ++ Sbjct: 6 KLFMLFISASLINNIVFMRFLALCPFVGMSTQIETSIGMGAAVTFVMVMASVVTFFIYYY 65 Query: 63 T-----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEA 117 +R ++++IA +V V+M+I + GLY+++GI++PLI TNC ++G Sbjct: 66 ILVPLNLLFLRTIAFILVIAVLVQLVEMVIKRFLSGLYKAMGIYLPLITTNCAILGVTLL 125 Query: 118 FA-AKKGPALSALDGFSIGMGATCAMFVLGSLREIIGN 154 + + + +G T A+ +L S+R+ + Sbjct: 126 NINYGHNLIEAIVYSLGVSLGFTIALILLASIRDRLSY 163 >UniRef50_A8S6D1 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6D1_9FIRM Length = 241 Score = 117 bits (293), Expect = 3e-25, Method: Composition-based stats. Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 31/223 (13%) Query: 10 QGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEI-- 67 ++ NN ++Q +GL PL+ V +T N L L A TL+L + + L P Sbjct: 20 DRVFLNNPVVMQGMGLAPLVVVATTGQNGLMLAAAVTLLLVPSRVLACLLSRLVPLRDEE 79 Query: 68 ------------RIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 R +Y A V A ++N +LGI++P++V ++ R Sbjct: 80 PTPEQLQKKLLPRALLYAASAAVVYLAAYPILNFVFGTGLLNLGIYLPMLVVEPLLTYRF 139 Query: 116 EAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVE 175 A+S G I +G + V+G +RE + GT+F A +G WA + Sbjct: 140 GRVQETVHKAVS--KGVRITVGYALLLLVVGVVREWLSLGTVFG---APVGRWALL---- 190 Query: 176 IFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRAEAA 218 LA +P G FI LG++ A + K+ + A Sbjct: 191 --------PLAKMPAGGFIVLGILCAIWRAAAAKRKEYLKKEA 225 >UniRef50_A1WT44 RnfA-Nqr electron transport subunit n=13 Tax=Bacteria RepID=A1WT44_HALHL Length = 193 Score = 116 bits (291), Expect = 6e-25, Method: Composition-based stats. Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 5/149 (3%) Query: 7 VIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTIS----TLRHW 62 + + NN L LG+CP+L V+ A +G+A+ V+ + +L L ++ Sbjct: 9 IFLNAAIINNFVLALFLGICPILGVSGKLGTAFPMGVASAFVMLIASLAAYGINIVLGYF 68 Query: 63 TPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKK 122 + + Y+ +IAS V V+M + ++ LY++LGIF+PLI TNC ++G A + + Sbjct: 69 ELEFLSLIAYIAVIASAVQLVEMFVKKFSPPLYRALGIFLPLITTNCAILGVALFQTSYE 128 Query: 123 GPAL-SALDGFSIGMGATCAMFVLGSLRE 150 L S G G A+ ++ LRE Sbjct: 129 YNFLQSLTYSLGAGAGFILAIVLMAGLRE 157 >UniRef50_A6LW81 RnfA-Nqr electron transport subunit n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LW81_CLOB8 Length = 191 Score = 116 bits (291), Expect = 6e-25, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 6/158 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M E + + L NN L + +GLC V+ + ++G+G+A T V+TL+++ + Sbjct: 1 MREYFTLFIGALLVNNFVLTKFVGLCIFFGVSKSLDASIGMGMAVTSVITLSSMLAWVVY 60 Query: 61 HWT-----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA 115 ++ + ++V++IAS V ++++I A LY GI++ LI TNCIV+ Sbjct: 61 NFVLLPYHLTFLTTIVFVILIASFVQLLELIIKKQAPTLYSMWGIYLLLIATNCIVLSVP 120 Query: 116 EAFAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREII 152 + S + GMG A+ ++ SLRE + Sbjct: 121 LLSVESNYSFVKSVVFSIGSGMGFALALVLMASLREKL 158 >UniRef50_C0EE36 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE36_9CLOT Length = 203 Score = 116 bits (290), Expect = 8e-25, Method: Composition-based stats. Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 16/212 (7%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + ++ L N L + L + P++ + NA L LA ++ +T + S + Sbjct: 4 KHLIVEKLKDLLYANMVLERGLLVAPVVVMAYNLKNAAALALAFAIITFVTVVFASFIPK 63 Query: 62 WTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAK 121 P +R+ V++ A + + ++ GL LGIF+PL++TN +V+ ++E K Sbjct: 64 KIPYAVRVIFNVVVAALMFIPAALAVDQIQPGLVYKLGIFLPLLITNSLVIQKSETRFRK 123 Query: 122 KGPAL-SALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTD 180 +D +G + ++G+LRE+ G+ TL+ A + Sbjct: 124 IPTKRGMIIDLIGHIIGFAIVICLVGALRELFGSATLWGKA---------------IGSF 168 Query: 181 SPFLLAMLPPGAFIGLGLMLAGKYLIDERMKK 212 +LP F+ +G++ A + R ++ Sbjct: 169 QTAPALLLPFSGFLLIGMLAALVNWLKARRER 200 >UniRef50_Q73PG5 Na(+)-translocating NADH-quinone reductase, E subunit n=1 Tax=Treponema denticola RepID=Q73PG5_TREDE Length = 190 Score = 113 bits (283), Expect = 5e-24, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 5/157 (3%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M E + + + N L++ L LCP + ++S ++G+G A V L + Sbjct: 1 MPETLSIFLSAILVKNVVLMRFLALCPFIGMSSDVKKSVGMGWAVLFVTLLATAVTYPIY 60 Query: 61 HWT----PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRA- 115 ++ ++ I++++IAS+V V+ + A LY S+G+++ LI TNC ++ Sbjct: 61 NYVLIGNLEFLQTLIFILVIASLVQLVEFYLKKAAPALYSSMGVYLALITTNCAILAVTI 120 Query: 116 EAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREII 152 +A + + G ++ +L LR+ I Sbjct: 121 DAIDEGYTFVQALVHAAGSAFGFMISLLLLAGLRQRI 157 >UniRef50_Q9ZC45 Na(+)-translocating NADH-quinone reductase subunit E n=23 Tax=Proteobacteria RepID=NQRE_YERPE Length = 199 Score = 113 bits (282), Expect = 6e-24, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 12/161 (7%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + ++ ++ N AL LG+C LA++ A GLGL T +L + + + Sbjct: 3 ESYLTIFIRAVFVENMALNFFLGMCTFLAISKKVETAFGLGLTVTALLAIATPLNNLIYT 62 Query: 62 WT-----------PAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCI 110 + + + ++ ++A++V ++M++ + L+ +LG F+PL+ +C Sbjct: 63 YILRENALIDGVDLSFLDFITFIGVLAALVQILEMVLERFLPSLHHTLGAFLPLLTIHCA 122 Query: 111 VVGRAEAFAAKKGPA-LSALDGFSIGMGATCAMFVLGSLRE 150 + G ++ S + G G+G A+ + LRE Sbjct: 123 IFGATIFMVQREYTFTESFVYGTGCGLGWMLAIISMAGLRE 163 >UniRef50_Q12W81 Electron transport complex protein rnfA n=2 Tax=Methanosarcinaceae RepID=Q12W81_METBU Length = 196 Score = 111 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 6/155 (3%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 + + + G++ N ++Q LGLC + VT +A G+ A V+TL + ++ Sbjct: 6 SLFQIFMDGVFIKNFLIIQFLGLCSFVGVTKDTKSAAGMSGAVIFVMTLAATVSFLIYNF 65 Query: 63 TP-----AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEA 117 + + ++++IA++V V+ ++ LY+SLGI++PLI TNC V+G Sbjct: 66 VLVPLKLEFLDLISFIVVIAALVQLVEFVVRKNVPSLYRSLGIYLPLITTNCAVLGVVLL 125 Query: 118 FAAKKGPAL-SALDGFSIGMGATCAMFVLGSLREI 151 + + S + G S G+G M ++ +RE Sbjct: 126 NVLNEYSFIQSVVFGVSAGIGYALVMLMMSGIRER 160 >UniRef50_C8R0U7 NADH:ubiquinone oxidoreductase, subunit E n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R0U7_9DELT Length = 203 Score = 111 bits (279), Expect = 1e-23, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 16/166 (9%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 ++ L+ N L LG+C LA++ A GLGLA ++ +T + + + Sbjct: 4 HYFEIFFTALFVENLVLTFFLGMCTFLAISRQVKTAFGLGLAVVIIQAITVPLNNLIYNL 63 Query: 63 TP---------------AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVT 107 + + +Y+ +IA+ V ++M ++ Y LY +LGIF+PL+ Sbjct: 64 VLQPGALGWLGLADIDLTFLGLLVYIGVIAATVQILEMFLDRYVPALYNTLGIFLPLLTV 123 Query: 108 NCIVVGRAEAFAAKKG-PALSALDGFSIGMGATCAMFVLGSLREII 152 NC ++G + + S G G G A+ +L +RE + Sbjct: 124 NCAILGASLFMVERDYALGESVAYGLGAGGGFLIAVVLLAGIREKL 169 >UniRef50_A8ZSV6 RnfA-Nqr electron transport subunit n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSV6_DESOH Length = 255 Score = 111 bits (278), Expect = 2e-23, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 34/184 (18%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 +I + + NN L +G+CP + V+ + A G+G A T V+T+ + + Sbjct: 6 DIFLIAMSAALINNFVLYYFVGICPFIGVSRNISMAFGMGCAVTFVITIAAFISWAITTF 65 Query: 63 TPAE-------------------------IRIPIYVMIIASVVSAVQMLINAYAFGLYQS 97 + +Y+ I+S V V+M + + LY+S Sbjct: 66 VLIPGAPLTAFVAGFFLPGEQAAAVDLTILSYIVYIFAISSSVQFVEMYVRKFFPPLYKS 125 Query: 98 LGIFIPLIVTNCIVVGRAEAFAAKKGP---------ALSALDGFSIGMGATCAMFVLGSL 148 G+F+PLI TNC ++ + + + G+G T A+ ++ + Sbjct: 126 FGVFLPLITTNCAILFACLTIMSNVAVDNPAEAWDLGRALVLAIFGGVGFTIAIVIMAGI 185 Query: 149 REII 152 RE + Sbjct: 186 REEL 189 >UniRef50_C0QFQ8 RnfA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFQ8_DESAH Length = 259 Score = 111 bits (277), Expect = 3e-23, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 35/185 (18%) Query: 3 EIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHW 62 +I + + NN L +G+CP + V+ A G+G A T V+T+ T+ Sbjct: 6 DIILIALSAALINNFVLYYFVGICPFIGVSRRVDMAFGMGCAVTFVITIAAFLSWTITTM 65 Query: 63 TPAE-------------------------IRIPIYVMIIASVVSAVQMLINAYAFGLYQS 97 + +Y+ IAS V V+M + + LY+S Sbjct: 66 VLIPGAPLSSFVAGFFLSKEAASTIDLTVLSYIVYIFSIASSVQFVEMYVRKFFPILYKS 125 Query: 98 LGIFIPLIVTNCIVVGRAEAFAAKK----------GPALSALDGFSIGMGATCAMFVLGS 147 G+F+PLI TNC ++ + S F G+G T A+ ++ Sbjct: 126 FGVFLPLITTNCAILFACLTIMSNVVGVENPADAWDLWHSLTLAFFGGVGFTIAIVIMSG 185 Query: 148 LREII 152 +RE + Sbjct: 186 IREDL 190 >UniRef50_Q487D7 Na(+)-translocating NADH-quinone reductase subunit E n=345 Tax=Bacteria RepID=NQRE_COLP3 Length = 207 Score = 108 bits (270), Expect = 1e-22, Method: Composition-based stats. Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 21/171 (12%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M + ++ ++ N AL LG+C LAV+ + A+GLG+A +VL L + Sbjct: 1 MEHYLSIFIKTIFIENMALSFFLGMCTFLAVSKKVSTAIGLGVAVVVVLGLAVPANQIIY 60 Query: 61 HWTP--------------------AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGI 100 + + ++ +IA++V ++ML++ Y LYQ+LGI Sbjct: 61 QAILAPGALDSLMGITDPKESIDLSFLSFITFIGVIAALVQILEMLLDKYFPALYQALGI 120 Query: 101 FIPLIVTNCIVVGRAEAFAAKK-GPALSALDGFSIGMGATCAMFVLGSLRE 150 F+PLI NC + G AK S + G G+G A+ ++ LRE Sbjct: 121 FLPLITVNCAIFGAVSFMVAKNLTLGESVVYGVGSGIGWMLAIVLMAGLRE 171 >UniRef50_Q4K753 Putative uncharacterized protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4K753_PSEF5 Length = 187 Score = 101 bits (253), Expect = 1e-20, Method: Composition-based stats. Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 9/188 (4%) Query: 27 PLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQML 86 PL+ T + A+GL LA L++ L + LR A +++ AS+ S + + Sbjct: 4 PLIGATDSWVKAIGLALAWVLLIGLYGAGMRLLRPPIEARHHWLASLLLSASLGSCLWLA 63 Query: 87 INAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLG 146 + A+++ L+Q L +++ L+ C+V+ +A F + L+ A+ LG Sbjct: 64 LQAWSYELHQQLSLYLGLLPLQCVVLEQAGFFQHRNRLRLAGA--------FCVALIGLG 115 Query: 147 SLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLI 206 +LRE++G GTL L+G + L L PG FI LG +LA K Sbjct: 116 ALRELLGAGTLGSHLGWLVGQPDAGSGWVVLPHG-GLHLLTLAPGGFILLGALLAAKRAW 174 Query: 207 DERMKKRR 214 R Sbjct: 175 AGPWTLNR 182 >UniRef50_Q1Q255 Similar to Na(+)-translocating NADH-quinone reductasesubunit E n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q255_9BACT Length = 472 Score = 99 bits (248), Expect = 6e-20, Method: Composition-based stats. Identities = 50/217 (23%), Positives = 83/217 (38%), Gaps = 20/217 (9%) Query: 13 WKNNSALVQL--LGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTP---AEI 67 ++N L LG C LAVT+ N+L +GL V + I R + Sbjct: 16 LRDNLILTAGAGLGFCSALAVTNKLENSLTMGLGVLFVAMGSFSLIYPFRRLITIAGSHH 75 Query: 68 RIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALS 127 +I + ++I++ V+ A+ + S+ +I LI TNCIV+ + + Sbjct: 76 KISLLMIIVSVFVTIFAFFAQAFVPEVAASIRAYIDLITTNCIVLAV-ISEGLTVPFWEA 134 Query: 128 ALDGFSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAM 187 MG A+ +L LRE +G GT+ + T +L + Sbjct: 135 QKKILKACMGYAFALILLAFLREPLGFGTIMGFSVIP-------------ETFPRVVLMI 181 Query: 188 LPPGAFIGL-GLMLAGKYLIDERMKKRRAEAAAERAL 223 P G F L G L + + + + A+ E A Sbjct: 182 TPVGGFFALAGFRLMMRPFLLKARIVYQEAASCECAA 218 Score = 92.3 bits (228), Expect = 1e-17, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 19/165 (11%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 +++ L+ + L +LLG+CPLL + A +G+A +V+TL+ + + Sbjct: 271 FLPILLNALFFDGIVLSKLLGICPLLNKSRQIDAAWKMGIAVIIVMTLSTALNWVVYNKV 330 Query: 64 P------------AEIR------IPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLI 105 IR + ++++ IA V + +++ +A Y+ +G F+ LI Sbjct: 331 LIMGSDVLAKYSSMSIRLEKIFYLTVFIVTIAVFVQTLSVMLRKFARTAYEQMGQFLELI 390 Query: 106 VTNCIVVGRAEA-FAAKKGPALSALDGFSIGMGATCAMFVLGSLR 149 NCIV+ A +S + F G+ L LR Sbjct: 391 TVNCIVLASATFTIPTGTSFMVSTITAFGYGLHWLMVTVWLALLR 435 >UniRef50_Q3K7K5 Putative electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3K7K5_PSEPF Length = 193 Score = 93.1 bits (230), Expect = 6e-18, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 14/182 (7%) Query: 28 LLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLI 87 L+ T + AL L +V+ + L ++ LR +E +P+ +++ A++ + + Sbjct: 16 LIGATDSVAGALATLLMFAVVVGVYGLCMTPLRSRLSSESLLPVSLILAATLAGCADIFL 75 Query: 88 NAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGS 147 A +Q + ++ LI C+V+ F L T M VL Sbjct: 76 QRVAMQWHQLISLYAGLIGLQCVVLEHNGFFRRPVRNRLKLCGL------FTALMIVLAV 129 Query: 148 LREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLID 207 LRE+IG G++ L W ++ A L PGAFI LGL+LA + Sbjct: 130 LRELIGQGSI---GHHLSEHWQGLILF-----GDGLHFATLAPGAFILLGLLLAARQAWT 181 Query: 208 ER 209 Sbjct: 182 RP 183 >UniRef50_UPI0001699AE2 RnfA-Nqr electron transport subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699AE2 Length = 156 Score = 90.4 bits (223), Expect = 5e-17, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 4/96 (4%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 + + + + NN L LGLCP L V+ AL +GLAT V+ ++++ + Sbjct: 4 ESLSFIFLNAVLANNFVLALFLGLCPFLGVSGKLDTALPMGLATMFVMLVSSVCAFAINQ 63 Query: 62 WTP----AEIRIPIYVMIIASVVSAVQMLINAYAFG 93 +R+ Y+ +IAS V V+M + + G Sbjct: 64 ILVTFDIEFLRLIAYIAVIASAVQLVEMTLKKFTPG 99 >UniRef50_B0P6D1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6D1_9FIRM Length = 191 Score = 90.0 bits (222), Expect = 6e-17, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 1/145 (0%) Query: 28 LLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLI 87 + +T++ N++ + + L T L S P +Y + +++ A LI Sbjct: 6 AVVITTSLKNSVSISILLACSLVPTVLLASLAGARLPRWGAPILYTLFSLALIVACVPLI 65 Query: 88 NAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFA-AKKGPALSALDGFSIGMGATCAMFVLG 146 + + SLGIF+PL+ N +++ +A +++ P + +D S G M +L Sbjct: 66 LPISPEVADSLGIFVPLLSVNTLLLTLCGRYADSRRKPVFALVDAVSYSAGFALIMCLLA 125 Query: 147 SLREIIGNGTLFDGADALLGSWAKV 171 LRE +G G ++ + + + Sbjct: 126 LLREWLGTGNIWGVPVRAPFTLSGI 150 >UniRef50_A9NEB4 NADH oxidoreductase complex RnfABCDGE type, E subunit n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NEB4_ACHLI Length = 192 Score = 89.6 bits (221), Expect = 8e-17, Method: Composition-based stats. Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 14/193 (7%) Query: 14 KNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYV 73 KNN LL + PL+ + +T AL +GL ++ + + ++ +R Y+ Sbjct: 3 KNNLKPFILLSILPLIYLANTLETALFMGLVYVVLALIIYAGGLLINKFSEGRMRSYAYI 62 Query: 74 MIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFS 133 ++ AS+V+ + ++ Y L Q +GI++ L I R E K GF Sbjct: 63 LLTASIVTIIMTVLGTYF-SLNQLMGIYLAL-TIFTIPQLRLETVEEKS----IVDHGFM 116 Query: 134 IGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAF 193 I +G A+ ++G LRE +G G++ A + V++F + G F Sbjct: 117 ILVGF-VALILIGFLREFLGTGSISLLA-------FGLDTVQVFDAKFGIAILKDNSGGF 168 Query: 194 IGLGLMLAGKYLI 206 I G + A I Sbjct: 169 ILAGFIFAIINAI 181 >UniRef50_A4MZD9 Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Haemophilus influenzae 22.1-21 RepID=A4MZD9_HAEIN Length = 128 Score = 85.7 bits (211), Expect = 1e-15, Method: Composition-based stats. Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%) Query: 1 MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR 60 M+ +I+ NN LV+ LGLCP + V+ A+G+GLAT VLT+ +L + Sbjct: 1 MTHYILLIIGTALINNFVLVKFLGLCPFMGVSKKIETAVGMGLATMFVLTVASLCAYLVD 60 Query: 61 HWTP-----AEIRIPIYVMIIASVVSAVQMLINA 89 H+ +R +++++IA VV +M IN Sbjct: 61 HYILIPLNATFLRTLVFILVIAVVVQFTEMAINK 94 >UniRef50_UPI0000397FA3 COG4657: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA n=1 Tax=Actinobacillus pleuropneumoniae serovar 1 str. 4074 RepID=UPI0000397FA3 Length = 181 Score = 84.6 bits (208), Expect = 2e-15, Method: Composition-based stats. Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 6/114 (5%) Query: 38 ALGLGLATTLVLTLTNLTISTLRHWTP-----AEIRIPIYVMIIASVVSAVQMLINAYAF 92 A+G+G+ATT VLT+ +L+ + + +R +++++IA +V +M+++ + Sbjct: 1 AIGMGMATTFVLTVASLSAYLVETYVLIPLEAQFLRTLVFILVIAVIVQLTEMIVHKTSP 60 Query: 93 GLYQSLGIFIPLIVTNCIVVGRA-EAFAAKKGPALSALDGFSIGMGATCAMFVL 145 LY+ LGI++PLI TNC V+G A S L GF +G + + + Sbjct: 61 TLYRLLGIYLPLITTNCAVLGVALLNVNLSNNLVESVLYGFGAALGFSLVLVLF 114 >UniRef50_B0MP91 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP91_9FIRM Length = 198 Score = 83.8 bits (206), Expect = 4e-15, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 6/157 (3%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 + + ++ N+ + LG + + GLGL T V+ +++ + W Sbjct: 7 FINTAMLAMFVENAIFSRALGTSVAFYASRKKESIFGLGLGITYVIVVSSCITFFIDGWL 66 Query: 64 PAE-----IRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAF 118 + IY + ++ V + +L+ + +++++ ++ L V N V+G Sbjct: 67 ADWQYFYVVMPLIYTLTVSIVYTGSLLLLWRFLPKIFRNIKKYVHLSVFNAAVLGALFLN 126 Query: 119 AAKKGPALSAL-DGFSIGMGATCAMFVLGSLREIIGN 154 S + G I G A+F L E + + Sbjct: 127 TTYHADFFSYMGFGVGIAAGFFIAVFFLHIANERLNS 163 >UniRef50_A7C280 RnfA-Nqr electron transport subunit n=1 Tax=Beggiatoa sp. PS RepID=A7C280_9GAMM Length = 94 Score = 75.7 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 3/92 (3%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 S++ + + L NN LGLCP V+ A LGLA+T V+ +T + L Sbjct: 3 SQLLWIFISALLVNNFVFSYFLGLCPFFGVSGKLETAFRLGLASTFVMLITAICTWFLNT 62 Query: 62 WTP---AEIRIPIYVMIIASVVSAVQMLINAY 90 + +R+ ++++IAS V V+M+I Sbjct: 63 YILIYAPYLRLISFIVVIASTVQFVEMVIKKI 94 >UniRef50_UPI0001C372EF hypothetical protein RflaF_11025 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C372EF Length = 191 Score = 75.3 bits (184), Expect = 1e-12, Method: Composition-based stats. Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 12/155 (7%) Query: 9 VQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIR 68 + L N L Q LG + S N + TL T+ + + + P +R Sbjct: 7 IIALLAANLILTQALGTSTMFIAASGRKNLVRTACVITLFTTVASAFTYFVDVFMPDSVR 66 Query: 69 ----IPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVG-------RAEA 117 + Y +II + + ++ + +++ +I + NC V+G RA A Sbjct: 67 VYATLICYTLIIGVLYALFLTVLYLFGREKFEAYKKYIHISAFNCAVMGTLFTISERAAA 126 Query: 118 FAAKKGPALSALDGFSIGMGATCA-MFVLGSLREI 151 + + L+G G+G A +F+ + R++ Sbjct: 127 DPSLRNTVTYFLNGLEAGVGFIIASLFLAAAFRKL 161 >UniRef50_B6G8I1 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G8I1_9ACTN Length = 220 Score = 75.0 bits (183), Expect = 2e-12, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 7/147 (4%) Query: 17 SALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMII 76 + + G P L V ++ N L +GL T + L LR +T R+P+ +M+ Sbjct: 22 PTFLVVAGALPGLFVATSFENGLMIGLVTAAAIVLMASLAPLLRCFTSMWSRVPVMLMVS 81 Query: 77 ASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVG----RAEAFAAKKGPALSALDGF 132 + + + + +++SLGI++PL+ N +V A K P ++A+ Sbjct: 82 VTAATLLGFAVRVANPVVFESLGIYLPLVAVNALVAAWIASDGLTVAPAKTPLMTAMFAA 141 Query: 133 SIGMGATCAMFVLGSLREIIGNGTLFD 159 ++ + A+ +G + ++ G +F Sbjct: 142 AMVL---AALTFVGFINGMLTTGQVFG 165 >UniRef50_A6NPN4 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NPN4_9BACE Length = 193 Score = 68.4 bits (166), Expect = 2e-10, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 6/124 (4%) Query: 37 NALGLGLATTLVLTLTNLTISTLRHWTP-----AEIRIPIYVMIIASVVSAVQMLINAYA 91 +AL +GL T+ LT + L + + + ++++ A + L+ + Sbjct: 37 SALAMGLTVTVGLTASMLLCWVVYAFLLSPFGAEYLEEAFFLLLTAGLAWLANRLMTKFL 96 Query: 92 FGLYQSLGIFIPLIVTNCIVVGRAEAFA-AKKGPALSALDGFSIGMGATCAMFVLGSLRE 150 G + L +P+ NC V+G A + ++ G A + G G+G T A V S+ E Sbjct: 97 PGKAEHLRQSLPMAAINCAVLGGAMLVSRSEVGLAPALRSGLLSGIGFTVAALVFVSVWE 156 Query: 151 IIGN 154 + Sbjct: 157 RVSY 160 >UniRef50_C0EE35 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE35_9CLOT Length = 205 Score = 52.6 bits (125), Expect = 1e-05, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 6/149 (4%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWT 63 +++ ++ N+ + LG +L + N L G+ TL+ + ++ + Sbjct: 15 FFSMLILAIFLENTVFTRALGTSTVLLMLRKKANLLLFGVVLTLITVIASVLAFWINPLL 74 Query: 64 P-----AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGR-AEA 117 + +YV+II+ V +++ L + L I L NC V G A Sbjct: 75 ADFPNKYYVTPIVYVLIISLVYVVALIVVKRLLKRLAEELVPMIHLSAFNCAVFGALLLA 134 Query: 118 FAAKKGPALSALDGFSIGMGATCAMFVLG 146 + K A + G G+G T A +L Sbjct: 135 NSYKMTLASTIGFGLGSGLGFTLAALMLA 163 >UniRef50_B2A6W6 SoxR-reducing system protein RsxE n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W6_NATTJ Length = 86 Score = 46.8 bits (110), Expect = 5e-04, Method: Composition-based stats. Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Query: 85 MLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFV 144 ML+ AY+ L +S GIF+PLIVTNC+++ R+EAFA+KK + + A + Sbjct: 1 MLLEAYSPALQKSRGIFVPLIVTNCLILERSEAFASKKKSVHLLV--MLASVPFIIAGVL 58 Query: 145 LGSLREIIG 153 + +G Sbjct: 59 SIAFTGFLG 67 >UniRef50_B0P6D2 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P6D2_9FIRM Length = 203 Score = 45.7 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 51/163 (31%), Gaps = 11/163 (6%) Query: 2 SEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRH 61 SE N+ + LG + L G ++TL+ L + Sbjct: 6 SEFLIAAFTAAILQNAVFARGLGASGETLALNKPRGILRFGAFVIYIVTLSAALAWPLNY 65 Query: 62 WTP----------AEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIV 111 + ++ I V + + A+ L+ +L N V Sbjct: 66 LLRLYRLSSRLGIRYLSSITTLLCICLVFALTYAVTRAWLPRLHYALRPLALPAALNTAV 125 Query: 112 VGR-AEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIG 153 +G AF++ G + F G G T A+ ++ R+ I Sbjct: 126 LGAILLAFSSGYGYLKTCGFAFGSGAGYTLALLLISEGRKRIA 168 >UniRef50_B6G8I2 Putative uncharacterized protein n=2 Tax=Collinsella RepID=B6G8I2_9ACTN Length = 198 Score = 43.4 bits (101), Expect = 0.006, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 9/158 (5%) Query: 4 IKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLR--- 60 + + NN QL+G+ ++ V ++ G + + L Sbjct: 3 FLNALFTAALDNNLVFAQLIGMVSVVLVAGRPQDSFRFGAMIAVATAVAGAPGWPLYTQL 62 Query: 61 --HWTPAEIRIPIYVMIIASVVSAVQMLINA-YAFGLYQSLGIFIPLIVTNCIVVGRAEA 117 W A + YV++ +V+ V ++ A + + L P++ N V+ + Sbjct: 63 MQPWGVAYLAPLAYVLVSWAVIVVVATILGAGKSVAERERLLRVCPIVACNAAVLAVSLG 122 Query: 118 FAAKKGPAL---SALDGFSIGMGATCAMFVLGSLREII 152 AA + G+G A+ + +R+ I Sbjct: 123 NAAVADTLTWDAALGSSIGAGLGVLLAVVLFAFVRDRI 160 >UniRef50_Q73MW3 Membrane protein, putative n=1 Tax=Treponema denticola RepID=Q73MW3_TREDE Length = 197 Score = 43.0 bits (100), Expect = 0.009, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 11/208 (5%) Query: 12 LWKNNSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPI 71 + N +V L GLCP++ S + L ++ ++ L L + Sbjct: 1 MAANKKLIVFLFGLCPIIPAASNFAYGIVLTVSLWVIFFLGILGNYVGKLIDINRFNYVF 60 Query: 72 YVMIIASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDG 131 + + + + V L+ ++ L ++ ++ + I+ + + + Sbjct: 61 VSIFMITGTALVNALLEGILPIIHGPLQVYTYILTFSYIIFLGLKQYYEDS-------ES 113 Query: 132 FSIGMGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPG 191 + + + + L +LRE G+L + S LR+ F F G Sbjct: 114 LDLPIWYSVLILSLSALREFFAFGSL----SFPVSSGFLSLRLPYFSNHPLFRFLGTTAG 169 Query: 192 AFIGLGLMLAGKYLIDERMKKRRAEAAA 219 AFI LGL++ + + + + + Sbjct: 170 AFIILGLIIWIYFSVTKELPTVKMGEEE 197 >UniRef50_UPI0001699AC7 Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699AC7 Length = 201 Score = 42.2 bits (98), Expect = 0.012, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 5/48 (10%) Query: 40 GLGLATTLVLTLTNLTISTLRHWTP-----AEIRIPIYVMIIASVVSA 82 G G TT VLTL+++ + +R ++++IA VV Sbjct: 41 GWGWLTTFVLTLSSICSYLANEYLLAPLGLEFMRTIAFILVIAVVVQF 88 >UniRef50_C8PP66 Putative membrane protein n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PP66_9SPIO Length = 198 Score = 40.3 bits (93), Expect = 0.058, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 69/193 (35%), Gaps = 13/193 (6%) Query: 16 NSALVQLLGLCPLLAVTSTATNALGLGLATTLVLTLTNLTISTLRHWTPAEIRIPIYVMI 75 N +++ LGLCP++ + + L L+ + L+ + ++ ++ I + Sbjct: 3 NKSIIFFLGLCPIIPLAAHFAEGLIFIAEFWLLFAASILSKQLINYFKIGKLSQIITYLA 62 Query: 76 IASVVSAVQMLINAYAFGLYQSLGIFIPLIVTNCIVVGRAEAFAAKKGPALSALDGFSIG 135 I + I + +L +I + + I++ + + + P + Sbjct: 63 IMLAAALYAQAIGVIFPVMAVTLERYIYMAAFSYILIISIGMYDSSRYPFE-------LP 115 Query: 136 MGATCAMFVLGSLREIIGNGTLFDGADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIG 195 + + + LRE+I GTL L S + + + + P G + Sbjct: 116 VTYSLLLTATSILRELIVFGTL------SLPSRSGLFSITLIPLSLPLKFWGSSAGVLMV 169 Query: 196 LGLMLAGKYLIDE 208 LG+ L + Sbjct: 170 LGIALWLFRSFHK 182 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.319 0.148 0.401 Lambda K H 0.267 0.0454 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,359,354,751 Number of Sequences: 3077464 Number of extensions: 57359600 Number of successful extensions: 352794 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 274 Number of HSP's successfully gapped in prelim test: 286 Number of HSP's that attempted gapping in prelim test: 351755 Number of HSP's gapped (non-prelim): 744 length of query: 231 length of database: 1,040,396,356 effective HSP length: 124 effective length of query: 107 effective length of database: 658,790,820 effective search space: 70490617740 effective search space used: 70490617740 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.2 bits) S2: 91 (39.5 bits)