60 c3ncoA_ Probab=99.91   E-value=8.6e-22  Score=147.29  Aligned_columns=259  Identities=19%

Q ss_pred             CHHHH--HHHHHHHHHHCCCEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHC
Q ss_conf             14308--9999999980998899215402402068888889999999999999999869869998334788678998718
Q batch____        69 FYHRY--KEDIALMAEMGFKVFRTSIAWSRLFPQGDEITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYG  146 (474)
Q Consensus        69 ~y~~y--~eDi~l~~~lG~~~yRfsi~WsRi~P~g~~~~~n~~gl~~Y~~~i~~l~~~GI~PivTL~HfdlP~~l~~~~G  146 (474)
                      +|..|  ++|+++|+++|+|+.|+.|+|++++|.+..+.++++.+++++++|+.|+++||.+|++|||++-+.       
T Consensus        30 ~w~~~~te~d~~~ia~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gl~viidlH~~~~~~-------  102 (313)
T c3ncoA_          30 SWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELY-------  102 (313)
T ss_dssp             TTSCCCCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHHH-------
T ss_pred             CCCCCCCHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCC-------
T ss_conf             8788388999999998599889982768881578888760899999999999999988988999801686435-------


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHCCC--CCEEEECCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8478437999999999999984686--75997156702231031012676888866642589999999999969999999
Q batch____       147 SWRNRKLVEFFSRYARTCFEAFDGL--VKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIA  224 (474)
Q Consensus       147 Gw~n~~~v~~F~~Ya~~~~~~fgdr--V~~W~TiNEP~~~~~~~y~~g~~~~~~~~~~~~~~~~~~~~~l~Aha~a~~~~  224 (474)
                       +......+.+..+...++++|++.  |-.|-.+|||.......-                       ......++++++
T Consensus       103 -~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~l~NEp~~~~~~~~-----------------------~~~~~~~~~~~i  158 (313)
T c3ncoA_         103 -QAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEIFNEPAQNLTPTK-----------------------WNELYPKVLGEI  158 (313)
T ss_dssp             -HCHHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSCCCTTSCHHH-----------------------HHHHHHHHHHHH
T ss_pred             -CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHH-----------------------HHHHHHHHHHHH
T ss_conf             -66213579998667999999627993899743445577889889-----------------------999999999864


Q ss_pred             HHHCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCC
Q ss_conf             96246882799831761124688845589999999873512260005788889999998628998888005787189876
Q batch____       225 HEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVD  304 (474)
Q Consensus       225 ~~~~~~~~vgi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~d~~~~G~yp~~~~~~~~~~~~~~~~~~~e~~~i~~~~D  304 (474)
                      |+..|+..|-+.-..-....                                               ...........-.
T Consensus       159 r~~~p~~~iiv~g~~~~~~~-----------------------------------------------~~~~~~~~~~~~v  191 (313)
T c3ncoA_         159 RKTNPSRIVIIDVPNWSNYS-----------------------------------------------YVRELKLVDDKNI  191 (313)
T ss_dssp             HHHCSSCCEEEECSGGGBGG-----------------------------------------------GGGGCCCCSCTTE
T ss_pred             CCCCCCCEEEECCCCCCCCC-----------------------------------------------CCCCCCCCCCCEE
T ss_conf             12478827997278777622-----------------------------------------------0012346789718


Q ss_pred             EEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
Q ss_conf             99985887558604788887655554333468876767862277528999999999988389899993587687776755
Q batch____       305 FVSFSYYASRCASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAAN  384 (474)
Q Consensus       305 fiGinyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~s~~~w~i~P~gl~~~l~~~~~rY~~Pi~ItENG~~~~~~~~~~  384 (474)
                      .+.+.+|.+..................     .....+++........+..+..+.. +++.||+|+|.|+....     
T Consensus       192 ~~~~H~Y~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~Pv~igEfG~~~~~-----  260 (313)
T c3ncoA_         192 IVSFHYYEPFNFTHQGAEWVSPTLPIG-----VKWEGKDWEVEQIRNHFKYVSEWAK-KNNVPIFLGEFGAYSKA-----  260 (313)
T ss_dssp             EEEEEECCSHHHHTTTCTTSSSCCCSC-----CCCCCCHHHHHHHHHHHHHHHHHHH-HHTCCEEEEEECCCTTS-----
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCHHHHHHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCC-----
T ss_conf             999604765422366666677655555-----5446855569999999999999887-44996999124688689-----


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCC
Q ss_conf             62232789999999999999999859988897333103480
Q batch____       385 GEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLV  425 (474)
Q Consensus       385 ~~~~D~~R~~yl~~~l~~~~~Ai~dGv~v~GY~~WSl~Dn~  425 (474)
                         ....|.+|++..+..+.+.   |+   |+++|++-+.|
T Consensus       261 ---~~~~~~~~~~~~~~~~~~~---gi---gw~~W~~~~~~  292 (313)
T c3ncoA_         261 ---DXESRVKWTKTVRRIAEEF---GF---SLAYWEFCAGF  292 (313)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHT---TC---EEEESCSSGGG
T ss_pred             ---CHHHHHHHHHHHHHHHHHC---CC---CEEEEECCCCC
T ss_conf             ---9899999999999999976---99---69998067886