91 c3civA_ Probab=99.58   E-value=1.1e-11  Score=88.14  Aligned_columns=290  Identities=18%

Q ss_pred             CCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             87789882400321443088707898625311112048775434444444556566788775656571430899999999
Q batch____         2 SVFPESFLWGGALAANQSEGAFREGDKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMA   81 (474)
Q Consensus         2 ~~FP~~F~wG~atsa~QvEG~~~~dg~g~s~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~d~y~~y~eDi~l~~   81 (474)
                      +-|-..|+-|+..+-++.-+.|..+                                             ..++|+++|+
T Consensus         2 ~~~~~~~i~G~~~~~~~~~~~~~~~---------------------------------------------~~~~~l~~l~   36 (316)
T c3civA_           2 SAFDLGFIRGMTFGFVGQHGTWGTD---------------------------------------------EARASMRALA   36 (316)
T ss_dssp             CSTTSCCEEEEEESTTCBTTGGGSH---------------------------------------------HHHHHHHHHH
T ss_pred             CCCCCCCCCCEEECCCCCCCCCCCH---------------------------------------------HHHHHHHHHH
T ss_conf             5012422156341441477888836---------------------------------------------8999999999


Q ss_pred             HHCCCEEEECCCHHHCCCCCCCCCCC---HHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCH-------
Q ss_conf             80998899215402402068888889---99999999999999986986999833478867899871884784-------
Q batch____        82 EMGFKVFRTSIAWSRLFPQGDEITPN---QQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNR-------  151 (474)
Q Consensus        82 ~lG~~~yRfsi~WsRi~P~g~~~~~n---~~gl~~Y~~~i~~l~~~GI~PivTL~HfdlP~~l~~~~GGw~n~-------  151 (474)
                      ++|+|+.|..+-|.-..|........   ....+.-+.+|+.+.++||..|++|+-+..+..-..........       
T Consensus        37 ~~G~N~vRi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~A~~~Gl~Vil~~h~~~~~~~w~~~~~~~~~~~~~~~~~  116 (316)
T c3civA_          37 EQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEKEHGPDLESW  116 (316)
T ss_dssp             HSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCSBSCCTTSSBH
T ss_pred             HCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             83998999823247777677654447677679789999999998689879997235888876555667678601255769


Q ss_pred             ----HHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             ----3799999999999998468675997156702231031012676888866642589999999999969999999962
Q batch____       152 ----KLVEFFSRYARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEV  227 (474)
Q Consensus       152 ----~~v~~F~~Ya~~~~~~fgdrV~~W~TiNEP~~~~~~~y~~g~~~~~~~~~~~~~~~~~~~~~l~Aha~a~~~~~~~  227 (474)
                          +.+..|...-..+....+  +..+...||++....                          .......+++.+|+.
T Consensus       117 ~~~~~~~~~~~~~~a~~~~~~~--nE~~~~gne~~~~~~--------------------------~~~~~~~~~~~ir~~  168 (316)
T c3civA_         117 EAWFGSYSDMMAHYAHVAKRTG--CEMFCVGCEMTTAEP--------------------------HEAMWRETIARVRTE  168 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT--CSEEEEEESCTTTTT--------------------------CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHCC--CCEEECCCCCCCCHH--------------------------HHHHHHHHHHHHHHH
T ss_conf             9999999999987999987419--985850677776001--------------------------467899999999974


Q ss_pred             CCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEE
Q ss_conf             46882799831761124688845589999999873512260005788889999998628998888005787189876999
Q batch____       228 NPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGTYPAYSARVFREKGVTINKAPGDDEILKNTVDFVS  307 (474)
Q Consensus       228 ~~~~~vgi~~~~~~~~p~~~~~~d~~aa~~~~~~~~~~~d~~~~G~yp~~~~~~~~~~~~~~~~~~~e~~~i~~~~DfiG  307 (474)
                      .|...+.+..............                                                     +|++|
T Consensus       169 dp~~~~~~~~~~~~~~~~~~~~-----------------------------------------------------~D~ig  195 (316)
T c3civA_         169 YDGLVTYNCNHGREEHVRFWDA-----------------------------------------------------VDLIS  195 (316)
T ss_dssp             CCSEEEEEEETTCTTTCSCGGG-----------------------------------------------------SSEEE
T ss_pred             CCCCEEEECCCCCCCCCCCCCC-----------------------------------------------------CCEEE
T ss_conf             6997799446886333453334-----------------------------------------------------57676


Q ss_pred             ECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC----
Q ss_conf             8588755860478888765555433346887676786227752899999999998838989999358768777675----
Q batch____       308 FSYYASRCASAEMNANNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDEFAA----  383 (474)
Q Consensus       308 inyY~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~s~~~w~i~P~gl~~~l~~~~~rY~~Pi~ItENG~~~~~~~~~----  383 (474)
                      +++|...                                 -........++.+...|++||+|||.|+........    
T Consensus       196 ~~~Y~~~---------------------------------~~~~~~~~~~~~~~~~~~kPi~i~E~G~~~~~g~~~~~~~  242 (316)
T c3civA_         196 SSAYYPI---------------------------------DRWRDRVPVLREVAEAHEKPLFFMEVGCPSRSGSGACPWD  242 (316)
T ss_dssp             EECCCCG---------------------------------GGHHHHHHHHHHHHHHHTCCEEEEEECCCSBTTGGGSTTC
T ss_pred             EECCCCC---------------------------------CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCC
T ss_conf             3147774---------------------------------3068899986546530588579970145223577667657


Q ss_pred             ---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECHHHH
Q ss_conf             ---56223278999999999999999985998889733310348003576532411189960778887877434123999
Q batch____       384 ---NGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFW  460 (474)
Q Consensus       384 ---~~~~~D~~R~~yl~~~l~~~~~Ai~dGv~v~GY~~WSl~Dn~EW~~G~y~~rfGL~~VD~~~~~~~t~~R~pK~Sa~  460 (474)
                         .....-+.-..|+++.+    .+..+.--+.|.++|+.-++-.=..|--...              ...+.+||.+.
T Consensus       243 ~~~~~~~~~~~Qa~~~~~~~----~~~~~~~~~~G~~~W~w~~~~~~~~~~~~d~--------------~f~~~~Kpa~~  304 (316)
T c3civA_         243 YRHPGAVCLDEQARFYEAMF----AAMPDEPWFKGYMLWEWPWKLYPREAASEDG--------------SYCIYGKPAED  304 (316)
T ss_dssp             TTCCCCBCHHHHHHHHHHHH----HHSCCCTTEEEEEEEEECSSCCCGGGGGGCC--------------SSCCTTSHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHH----HHHHCCCCEEEEEEEEECCCCCCCCCCCCCC--------------CCEECCCCHHH
T ss_conf             66644569899999999999----9985377802599986168788733256488--------------52077621899


Q ss_pred             HHHHHHHH
Q ss_conf             99999996
Q batch____       461 WYKKVIAS  468 (474)
Q Consensus       461 ~y~~ii~~  468 (474)
                      +.++.-+.
T Consensus       305 v~~~~~~~  312 (316)
T c3civA_         305 VVARAFSA  312 (316)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
T ss_conf             99999988


