BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (51 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root R... 92 4e-18 UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI 87 2e-16 UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX 50 3e-05 UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Entero... 49 7e-05 UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID... 45 5e-04 UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9... 44 0.002 UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax... 41 0.010 UniRef50_P13970 Protein srnB n=20 Tax=Enterobacteriaceae RepID=S... 40 0.026 UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronoba... 39 0.052 UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterob... 39 0.075 >UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root RepID=C8TT42_ECO26 Length = 70 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 47/51 (92%), Positives = 48/51 (94%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF YE E+ Sbjct: 20 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESEK 70 >UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI Length = 50 Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 41/50 (82%), Positives = 45/50 (90%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50 MKQ KAM++ALIVIC+T +V ALVTRKDLCEV IRTGQTEVAVFTAYE E Sbjct: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 >UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX Length = 52 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 32/45 (71%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYE 48 + +++ ++++CLT+++ +TRK LCE+R R G EVA F AYE Sbjct: 5 RSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAAFMAYE 49 >UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Enterobacteriaceae RepID=D2TJU7_CITRO Length = 50 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 22/45 (48%), Positives = 30/45 (66%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYE 48 QK +L +LIVICLT+++ + R LCE+ IR G E+A F A E Sbjct: 3 QKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACE 47 >UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID=C9Y3Z0_CROTZ Length = 52 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 30/46 (65%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEP 49 + + +++IC+T+++ +TR LCE+R++ GQ E A F AYE Sbjct: 5 RSTLFWCVLMICITLLMFTFLTRHSLCELRLKDGQREFAAFLAYES 50 >UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9F578_ECOLX Length = 53 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Query: 1 MKQQK-AMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50 MKQ K A+ L+++C T+++ +TR LCEVR++ G EV AYE Sbjct: 1 MKQPKNALTWCLLIVCCTLLIFTYLTRNRLCEVRLKDGDREVTASLAYESN 51 >UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C3405D Length = 50 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 30/47 (63%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50 ++A+L+ L +IC T+++ + R LCE+ R +TE+A AYE + Sbjct: 3 KRALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAK 49 >UniRef50_P13970 Protein srnB n=20 Tax=Enterobacteriaceae RepID=SRNB_ECOLI Length = 68 Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 28/47 (59%) Query: 5 KAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 K LI L+ +C TV+ +L+ R+ LCE+ I G T V V AYE + Sbjct: 22 KYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 68 >UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MPJ9_ENTS8 Length = 56 Score = 38.9 bits (89), Expect = 0.052, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 28/42 (66%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVA 42 MK +L L ++C+T+++ AL+ + LCE+ IR+G EVA Sbjct: 7 MKPLHYLLACLFMVCITILIFALMNQGTLCELTIRSGSQEVA 48 >UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C9Y1C5_CROTZ Length = 50 Score = 38.5 bits (88), Expect = 0.075, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 25/42 (59%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVA 42 MK K + +V C+T+++ AL+ LCE+ I+ G EVA Sbjct: 1 MKPLKYLFACFVVFCVTILIFALINHGTLCELTIKQGNKEVA 42 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root R... 68 6e-11 UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX 68 1e-10 UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID... 64 1e-09 UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI 63 2e-09 UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Entero... 59 4e-08 Sequences not found previously or not previously below threshold: UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9... 56 3e-07 UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax... 49 5e-05 UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOK... 46 3e-04 UniRef50_B5RJZ0 Hok/Gef family protein n=1 Tax=Klebsiella pneumo... 45 6e-04 UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronoba... 43 0.002 UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammapr... 43 0.003 UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp... 43 0.004 UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterob... 42 0.005 UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX 41 0.008 UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=... 40 0.019 UniRef50_B8EG05 Hok/gef cell toxic protein n=2 Tax=Shewanella ba... 40 0.019 UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio ... 39 0.039 UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersini... 38 0.066 >UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root RepID=C8TT42_ECO26 Length = 70 Score = 68.4 bits (166), Expect = 6e-11, Method: Composition-based stats. Identities = 47/51 (92%), Positives = 48/51 (94%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF YE E+ Sbjct: 20 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESEK 70 >UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX Length = 52 Score = 67.7 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 33/48 (68%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 + +++ ++++CLT+++ +TRK LCE+R R G EVA F AYE + Sbjct: 5 RSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAAFMAYESGK 52 >UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID=C9Y3Z0_CROTZ Length = 52 Score = 64.2 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 31/48 (64%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 + + +++IC+T+++ +TR LCE+R++ GQ E A F AYE + Sbjct: 5 RSTLFWCVLMICITLLMFTFLTRHSLCELRLKDGQREFAAFLAYESGK 52 >UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI Length = 50 Score = 63.4 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 41/50 (82%), Positives = 45/50 (90%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50 MKQ KAM++ALIVIC+T +V ALVTRKDLCEV IRTGQTEVAVFTAYE E Sbjct: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 >UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Enterobacteriaceae RepID=D2TJU7_CITRO Length = 50 Score = 59.2 bits (142), Expect = 4e-08, Method: Composition-based stats. Identities = 22/48 (45%), Positives = 32/48 (66%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 QK +L +LIVICLT+++ + R LCE+ IR G E+A F A E ++ Sbjct: 3 QKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACEVKQ 50 >UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9F578_ECOLX Length = 53 Score = 56.1 bits (134), Expect = 3e-07, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 1 MKQQK-AMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEP 49 MKQ K A+ L+++C T+++ +TR LCEVR++ G EV AYE Sbjct: 1 MKQPKNALTWCLLIVCCTLLIFTYLTRNRLCEVRLKDGDREVTASLAYES 50 >UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C3405D Length = 50 Score = 48.8 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 30/48 (62%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 ++A+L+ L +IC T+++ + R LCE+ R +TE+A AYE + Sbjct: 3 KRALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAKR 50 >UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOKB_ECOLI Length = 49 Score = 46.5 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%) Query: 3 QQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEP 49 + +++ L++IC+T++ L+TR+ L E+R R G EVA A Sbjct: 2 KHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALMACTS 48 >UniRef50_B5RJZ0 Hok/Gef family protein n=1 Tax=Klebsiella pneumoniae 342 RepID=B5RJZ0_KLEP3 Length = 55 Score = 45.3 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 11/30 (36%), Positives = 20/30 (66%) Query: 5 KAMLIALIVICLTVIVTALVTRKDLCEVRI 34 +L ++++CLT++ +TRK LCE+R Sbjct: 6 SNLLWCVLIVCLTLLAFTYLTRKSLCEIRY 35 >UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MPJ9_ENTS8 Length = 56 Score = 43.4 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 29/47 (61%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAY 47 MK +L L ++C+T+++ AL+ + LCE+ IR+G EVA A Sbjct: 7 MKPLHYLLACLFMVCITILIFALMNQGTLCELTIRSGSQEVAAKLAC 53 >UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=A7MEL1_ENTS8 Length = 52 Score = 43.0 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 29/49 (59%) Query: 3 QQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 + + +I++C+TVI+ ++R+ LCE+R+R E+ A +P E Sbjct: 4 KDNTFIWCIIIVCVTVIMFTTLSRETLCELRLRGAGMEIVASLACKPRE 52 >UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUJ6_AERS4 Length = 120 Score = 42.6 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 29/47 (61%) Query: 5 KAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 K +++L+++C+T + + R LCE+ + G+TE+ + AYE + Sbjct: 74 KTAVVSLLIVCITALGVISLVRDSLCELEVHQGETEIRLNLAYEAKR 120 >UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C9Y1C5_CROTZ Length = 50 Score = 42.2 bits (98), Expect = 0.005, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAY 47 MK K + +V C+T+++ AL+ LCE+ I+ G EVA + Sbjct: 1 MKPLKYLFACFVVFCVTILIFALINHGTLCELTIKQGNKEVAARLSC 47 >UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX Length = 50 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 28/48 (58%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 Q+ L+ LIVIC+T++ + R LC +R++ G T + AYE + Sbjct: 3 QRTFLMMLIVICVTILCFVWMVRDSLCGLRLQQGNTVLVATLAYEVKR 50 >UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=HOKE_ECO57 Length = 50 Score = 40.3 bits (93), Expect = 0.019, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 27/47 (57%) Query: 5 KAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 K L+A+IV+CLTV+ L+ LCE ++ E AYEP++ Sbjct: 4 KYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50 >UniRef50_B8EG05 Hok/gef cell toxic protein n=2 Tax=Shewanella baltica OS223 RepID=B8EG05_SHEB2 Length = 68 Score = 40.3 bits (93), Expect = 0.019, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 27/48 (56%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYE 48 M ++K ++L ++C T++ + R DLC+V R G + V AYE Sbjct: 18 MPKRKTTTLSLAIVCFTLLAALALIRDDLCKVEYRNGAMLLNVVLAYE 65 >UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus RepID=Q8D675_VIBVU Length = 65 Score = 39.2 bits (90), Expect = 0.039, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 28/45 (62%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYE 48 +K L AL+V+C+T ++ + LC++R + Q ++++ AYE Sbjct: 19 KKTALAALVVVCITAVILTALYTGSLCDIRYKDQQNDLSIKLAYE 63 >UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TZJ3_YERKR Length = 49 Score = 38.4 bits (88), Expect = 0.066, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 22/38 (57%) Query: 13 VICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50 +IC+T ++ + R LCEV I+ G E+A F + + Sbjct: 10 MICITAVLIIWMIRHSLCEVHIKLGGAEIAAFLQCKQQ 47 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX 69 4e-11 UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root R... 65 1e-09 UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9... 63 2e-09 UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID... 63 3e-09 UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI 62 5e-09 UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Entero... 60 3e-08 UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax... 57 2e-07 UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOK... 56 5e-07 UniRef50_B5RJZ0 Hok/Gef family protein n=1 Tax=Klebsiella pneumo... 48 9e-05 Sequences not found previously or not previously below threshold: UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronoba... 46 4e-04 UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp... 45 7e-04 UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammapr... 45 0.001 UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX 44 0.001 UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterob... 43 0.003 UniRef50_B8EG05 Hok/gef cell toxic protein n=2 Tax=Shewanella ba... 41 0.012 UniRef50_Q1RBZ5 Putative uncharacterized protein hok n=1 Tax=Esc... 40 0.018 UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=... 40 0.018 UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio ... 39 0.063 >UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX Length = 52 Score = 69.2 bits (168), Expect = 4e-11, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 33/48 (68%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 + +++ ++++CLT+++ +TRK LCE+R R G EVA F AYE + Sbjct: 5 RSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAAFMAYESGK 52 >UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root RepID=C8TT42_ECO26 Length = 70 Score = 64.6 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 47/51 (92%), Positives = 48/51 (94%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF YE E+ Sbjct: 20 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESEK 70 >UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9F578_ECOLX Length = 53 Score = 63.4 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%) Query: 1 MKQQK-AMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEP 49 MKQ K A+ L+++C T+++ +TR LCEVR++ G EV AYE Sbjct: 1 MKQPKNALTWCLLIVCCTLLIFTYLTRNRLCEVRLKDGDREVTASLAYES 50 >UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID=C9Y3Z0_CROTZ Length = 52 Score = 63.0 bits (152), Expect = 3e-09, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 31/48 (64%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 + + +++IC+T+++ +TR LCE+R++ GQ E A F AYE + Sbjct: 5 RSTLFWCVLMICITLLMFTFLTRHSLCELRLKDGQREFAAFLAYESGK 52 >UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI Length = 50 Score = 62.3 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 41/50 (82%), Positives = 45/50 (90%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50 MKQ KAM++ALIVIC+T +V ALVTRKDLCEV IRTGQTEVAVFTAYE E Sbjct: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 >UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Enterobacteriaceae RepID=D2TJU7_CITRO Length = 50 Score = 59.6 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 22/48 (45%), Positives = 32/48 (66%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 QK +L +LIVICLT+++ + R LCE+ IR G E+A F A E ++ Sbjct: 3 QKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACEVKQ 50 >UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C3405D Length = 50 Score = 56.9 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 30/48 (62%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 ++A+L+ L +IC T+++ + R LCE+ R +TE+A AYE + Sbjct: 3 KRALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAKR 50 >UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOKB_ECOLI Length = 49 Score = 55.7 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 28/48 (58%) Query: 3 QQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50 + +++ L++IC+T++ L+TR+ L E+R R G EVA A Sbjct: 2 KHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALMACTSR 49 >UniRef50_B5RJZ0 Hok/Gef family protein n=1 Tax=Klebsiella pneumoniae 342 RepID=B5RJZ0_KLEP3 Length = 55 Score = 48.0 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 11/31 (35%), Positives = 20/31 (64%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRI 34 +L ++++CLT++ +TRK LCE+R Sbjct: 5 PSNLLWCVLIVCLTLLAFTYLTRKSLCEIRY 35 >UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MPJ9_ENTS8 Length = 56 Score = 46.1 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 30/50 (60%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50 MK +L L ++C+T+++ AL+ + LCE+ IR+G EVA A + Sbjct: 7 MKPLHYLLACLFMVCITILIFALMNQGTLCELTIRSGSQEVAAKLACTGK 56 >UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUJ6_AERS4 Length = 120 Score = 45.3 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 29/47 (61%) Query: 5 KAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 K +++L+++C+T + + R LCE+ + G+TE+ + AYE + Sbjct: 74 KTAVVSLLIVCITALGVISLVRDSLCELEVHQGETEIRLNLAYEAKR 120 >UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=A7MEL1_ENTS8 Length = 52 Score = 44.5 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 29/49 (59%) Query: 3 QQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 + + +I++C+TVI+ ++R+ LCE+R+R E+ A +P E Sbjct: 4 KDNTFIWCIIIVCVTVIMFTTLSRETLCELRLRGAGMEIVASLACKPRE 52 >UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX Length = 50 Score = 44.2 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 28/48 (58%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 Q+ L+ LIVIC+T++ + R LC +R++ G T + AYE + Sbjct: 3 QRTFLMMLIVICVTILCFVWMVRDSLCGLRLQQGNTVLVATLAYEVKR 50 >UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C9Y1C5_CROTZ Length = 50 Score = 42.6 bits (99), Expect = 0.003, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 26/47 (55%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAY 47 MK K + +V C+T+++ AL+ LCE+ I+ G EVA + Sbjct: 1 MKPLKYLFACFVVFCVTILIFALINHGTLCELTIKQGNKEVAARLSC 47 >UniRef50_B8EG05 Hok/gef cell toxic protein n=2 Tax=Shewanella baltica OS223 RepID=B8EG05_SHEB2 Length = 68 Score = 41.1 bits (95), Expect = 0.012, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 27/50 (54%) Query: 1 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50 M ++K ++L ++C T++ + R DLC+V R G + V AYE Sbjct: 18 MPKRKTTTLSLAIVCFTLLAALALIRDDLCKVEYRNGAMLLNVVLAYEVR 67 >UniRef50_Q1RBZ5 Putative uncharacterized protein hok n=1 Tax=Escherichia coli UTI89 RepID=Q1RBZ5_ECOUT Length = 163 Score = 40.3 bits (93), Expect = 0.018, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Query: 17 TVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50 T++ +TR+ L E+R R G EVA A Sbjct: 131 TILTFT-LTRQSLYELRFRDGDKEVAALMACTSR 163 >UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=HOKE_ECO57 Length = 50 Score = 40.3 bits (93), Expect = 0.018, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 26/44 (59%) Query: 8 LIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51 L+A+IV+CLTV+ L+ LCE ++ E AYEP++ Sbjct: 7 LVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50 >UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus RepID=Q8D675_VIBVU Length = 65 Score = 38.8 bits (89), Expect = 0.063, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 28/47 (59%) Query: 4 QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50 +K L AL+V+C+T ++ + LC++R + Q ++++ AYE Sbjct: 19 KKTALAALVVVCITAVILTALYTGSLCDIRYKDQQNDLSIKLAYEVR 65 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.319 0.147 0.408 Lambda K H 0.267 0.0452 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 269,056,229 Number of Sequences: 3077464 Number of extensions: 6519791 Number of successful extensions: 27937 Number of sequences better than 1.0e-01: 21 Number of HSP's better than 0.1 without gapping: 57 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 27880 Number of HSP's gapped (non-prelim): 58 length of query: 51 length of database: 1,040,396,356 effective HSP length: 24 effective length of query: 27 effective length of database: 966,537,220 effective search space: 26096504940 effective search space used: 26096504940 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.2 bits) S2: 87 (38.0 bits)