Phyre 2 alignment of P0ACG6 with c3m9pA_

Return to main results | Retrieve Phyre Job Id

Job Description | P0ACG6
Confidence | 1.47% | Date | Thu Jan 5 11:18:08 GMT 2012
Rank | 68 | Aligned Residues | 19
% Identity | 11% | Template | c3m9pA_
PDB info | PDB header:dna binding protein/dna | Chain: A: PDB Molecule:male-specific lethal 3 homolog; | PDBTitle: human msl3 chromodomain bound to dna and h4k20me1 peptide
Resolution | 2.35 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 32 | . | . | . | . | . | . | . | 40 | . | . |  |  |  |  |  |  |  | . | . | . | . | . | . | . | 50
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | V | R | I | R | T | G | Q | T | E | V | A | . | . | . | . | . | . | . | V | F | T | A | Y | E | P | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | K | F | H | S | G | E | K | V | L | C | F | E | P | D | P | T | K | A | R | V | L | Y | D | A | K
Template Known Secondary structure |  |  |  | S |  | T | T |  |  |  |  |  |  |  | S |  | T | T | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions