BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (51 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root R...    92   4e-18
UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI        87   2e-16
UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX              50   3e-05
UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Entero...    49   7e-05
UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID...    45   5e-04
UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9...    44   0.002
UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax...    41   0.010
UniRef50_P13970 Protein srnB n=20 Tax=Enterobacteriaceae RepID=S...    40   0.026
UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronoba...    39   0.052
UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterob...    39   0.075

>UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root RepID=C8TT42_ECO26
          Length = 70

 Score = 92.4 bits (228), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 47/51 (92%), Positives = 48/51 (94%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF  YE E+
Sbjct: 20 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESEK 70


>UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI
          Length = 50

 Score = 87.0 bits (214), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/50 (82%), Positives = 45/50 (90%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50
          MKQ KAM++ALIVIC+T +V ALVTRKDLCEV IRTGQTEVAVFTAYE E
Sbjct: 1  MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50


>UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX
          Length = 52

 Score = 49.7 bits (117), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 19/45 (42%), Positives = 32/45 (71%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYE 48
          + +++  ++++CLT+++   +TRK LCE+R R G  EVA F AYE
Sbjct: 5  RSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAAFMAYE 49


>UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Enterobacteriaceae
          RepID=D2TJU7_CITRO
          Length = 50

 Score = 48.5 bits (114), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/45 (48%), Positives = 30/45 (66%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYE 48
          QK +L +LIVICLT+++   + R  LCE+ IR G  E+A F A E
Sbjct: 3  QKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACE 47


>UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID=C9Y3Z0_CROTZ
          Length = 52

 Score = 45.4 bits (106), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 30/46 (65%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEP 49
          +  +   +++IC+T+++   +TR  LCE+R++ GQ E A F AYE 
Sbjct: 5  RSTLFWCVLMICITLLMFTFLTRHSLCELRLKDGQREFAAFLAYES 50


>UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9F578_ECOLX
          Length = 53

 Score = 43.5 bits (101), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 1  MKQQK-AMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50
          MKQ K A+   L+++C T+++   +TR  LCEVR++ G  EV    AYE  
Sbjct: 1  MKQPKNALTWCLLIVCCTLLIFTYLTRNRLCEVRLKDGDREVTASLAYESN 51


>UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax=Enterobacter
          cancerogenus ATCC 35316 RepID=UPI0001C3405D
          Length = 50

 Score = 41.2 bits (95), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 30/47 (63%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50
          ++A+L+ L +IC T+++   + R  LCE+  R  +TE+A   AYE +
Sbjct: 3  KRALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAK 49


>UniRef50_P13970 Protein srnB n=20 Tax=Enterobacteriaceae RepID=SRNB_ECOLI
          Length = 68

 Score = 40.0 bits (92), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 28/47 (59%)

Query: 5  KAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          K  LI L+ +C TV+  +L+ R+ LCE+ I  G T V V  AYE  +
Sbjct: 22 KYALIGLLAVCATVLCFSLIFRERLCELNIHRGNTVVQVTLAYEARK 68


>UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronobacter
          RepID=A7MPJ9_ENTS8
          Length = 56

 Score = 38.9 bits (89), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 28/42 (66%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVA 42
          MK    +L  L ++C+T+++ AL+ +  LCE+ IR+G  EVA
Sbjct: 7  MKPLHYLLACLFMVCITILIFALMNQGTLCELTIRSGSQEVA 48


>UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae
          RepID=C9Y1C5_CROTZ
          Length = 50

 Score = 38.5 bits (88), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 16/42 (38%), Positives = 25/42 (59%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVA 42
          MK  K +    +V C+T+++ AL+    LCE+ I+ G  EVA
Sbjct: 1  MKPLKYLFACFVVFCVTILIFALINHGTLCELTIKQGNKEVA 42


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root R...    68   6e-11
UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX              68   1e-10
UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID...    64   1e-09
UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI        63   2e-09
UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Entero...    59   4e-08

Sequences not found previously or not previously below threshold:

UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9...    56   3e-07
UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax...    49   5e-05
UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOK...    46   3e-04
UniRef50_B5RJZ0 Hok/Gef family protein n=1 Tax=Klebsiella pneumo...    45   6e-04
UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronoba...    43   0.002
UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammapr...    43   0.003
UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp...    43   0.004
UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterob...    42   0.005
UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX           41   0.008
UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=...    40   0.019
UniRef50_B8EG05 Hok/gef cell toxic protein n=2 Tax=Shewanella ba...    40   0.019
UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio ...    39   0.039
UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersini...    38   0.066

>UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root RepID=C8TT42_ECO26
          Length = 70

 Score = 68.4 bits (166), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 47/51 (92%), Positives = 48/51 (94%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF  YE E+
Sbjct: 20 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESEK 70


>UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX
          Length = 52

 Score = 67.7 bits (164), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 33/48 (68%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          + +++  ++++CLT+++   +TRK LCE+R R G  EVA F AYE  +
Sbjct: 5  RSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAAFMAYESGK 52


>UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID=C9Y3Z0_CROTZ
          Length = 52

 Score = 64.2 bits (155), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 31/48 (64%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          +  +   +++IC+T+++   +TR  LCE+R++ GQ E A F AYE  +
Sbjct: 5  RSTLFWCVLMICITLLMFTFLTRHSLCELRLKDGQREFAAFLAYESGK 52


>UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI
          Length = 50

 Score = 63.4 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/50 (82%), Positives = 45/50 (90%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50
          MKQ KAM++ALIVIC+T +V ALVTRKDLCEV IRTGQTEVAVFTAYE E
Sbjct: 1  MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50


>UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Enterobacteriaceae
          RepID=D2TJU7_CITRO
          Length = 50

 Score = 59.2 bits (142), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 32/48 (66%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          QK +L +LIVICLT+++   + R  LCE+ IR G  E+A F A E ++
Sbjct: 3  QKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACEVKQ 50


>UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9F578_ECOLX
          Length = 53

 Score = 56.1 bits (134), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 1  MKQQK-AMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEP 49
          MKQ K A+   L+++C T+++   +TR  LCEVR++ G  EV    AYE 
Sbjct: 1  MKQPKNALTWCLLIVCCTLLIFTYLTRNRLCEVRLKDGDREVTASLAYES 50


>UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax=Enterobacter
          cancerogenus ATCC 35316 RepID=UPI0001C3405D
          Length = 50

 Score = 48.8 bits (115), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 30/48 (62%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          ++A+L+ L +IC T+++   + R  LCE+  R  +TE+A   AYE + 
Sbjct: 3  KRALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAKR 50


>UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOKB_ECOLI
          Length = 49

 Score = 46.5 bits (109), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 28/47 (59%)

Query: 3  QQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEP 49
          +   +++ L++IC+T++   L+TR+ L E+R R G  EVA   A   
Sbjct: 2  KHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALMACTS 48


>UniRef50_B5RJZ0 Hok/Gef family protein n=1 Tax=Klebsiella pneumoniae 342
          RepID=B5RJZ0_KLEP3
          Length = 55

 Score = 45.3 bits (106), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/30 (36%), Positives = 20/30 (66%)

Query: 5  KAMLIALIVICLTVIVTALVTRKDLCEVRI 34
            +L  ++++CLT++    +TRK LCE+R 
Sbjct: 6  SNLLWCVLIVCLTLLAFTYLTRKSLCEIRY 35


>UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronobacter
          RepID=A7MPJ9_ENTS8
          Length = 56

 Score = 43.4 bits (101), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 29/47 (61%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAY 47
          MK    +L  L ++C+T+++ AL+ +  LCE+ IR+G  EVA   A 
Sbjct: 7  MKPLHYLLACLFMVCITILIFALMNQGTLCELTIRSGSQEVAAKLAC 53


>UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria
          RepID=A7MEL1_ENTS8
          Length = 52

 Score = 43.0 bits (100), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 29/49 (59%)

Query: 3  QQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          +    +  +I++C+TVI+   ++R+ LCE+R+R    E+    A +P E
Sbjct: 4  KDNTFIWCIIIVCVTVIMFTTLSRETLCELRLRGAGMEIVASLACKPRE 52


>UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449
           RepID=A4SUJ6_AERS4
          Length = 120

 Score = 42.6 bits (99), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 29/47 (61%)

Query: 5   KAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
           K  +++L+++C+T +    + R  LCE+ +  G+TE+ +  AYE + 
Sbjct: 74  KTAVVSLLIVCITALGVISLVRDSLCELEVHQGETEIRLNLAYEAKR 120


>UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae
          RepID=C9Y1C5_CROTZ
          Length = 50

 Score = 42.2 bits (98), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAY 47
          MK  K +    +V C+T+++ AL+    LCE+ I+ G  EVA   + 
Sbjct: 1  MKPLKYLFACFVVFCVTILIFALINHGTLCELTIKQGNKEVAARLSC 47


>UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX
          Length = 50

 Score = 41.5 bits (96), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 28/48 (58%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          Q+  L+ LIVIC+T++    + R  LC +R++ G T +    AYE + 
Sbjct: 3  QRTFLMMLIVICVTILCFVWMVRDSLCGLRLQQGNTVLVATLAYEVKR 50


>UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=HOKE_ECO57
          Length = 50

 Score = 40.3 bits (93), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 27/47 (57%)

Query: 5  KAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          K  L+A+IV+CLTV+   L+    LCE  ++    E     AYEP++
Sbjct: 4  KYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50


>UniRef50_B8EG05 Hok/gef cell toxic protein n=2 Tax=Shewanella baltica OS223
          RepID=B8EG05_SHEB2
          Length = 68

 Score = 40.3 bits (93), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 27/48 (56%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYE 48
          M ++K   ++L ++C T++    + R DLC+V  R G   + V  AYE
Sbjct: 18 MPKRKTTTLSLAIVCFTLLAALALIRDDLCKVEYRNGAMLLNVVLAYE 65


>UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus
          RepID=Q8D675_VIBVU
          Length = 65

 Score = 39.2 bits (90), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 28/45 (62%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYE 48
          +K  L AL+V+C+T ++   +    LC++R +  Q ++++  AYE
Sbjct: 19 KKTALAALVVVCITAVILTALYTGSLCDIRYKDQQNDLSIKLAYE 63


>UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii
          ATCC 33638 RepID=C4TZJ3_YERKR
          Length = 49

 Score = 38.4 bits (88), Expect = 0.066,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 22/38 (57%)

Query: 13 VICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50
          +IC+T ++   + R  LCEV I+ G  E+A F   + +
Sbjct: 10 MICITAVLIIWMIRHSLCEVHIKLGGAEIAAFLQCKQQ 47


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX              69   4e-11
UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root R...    65   1e-09
UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9...    63   2e-09
UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID...    63   3e-09
UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI        62   5e-09
UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Entero...    60   3e-08
UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax...    57   2e-07
UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOK...    56   5e-07
UniRef50_B5RJZ0 Hok/Gef family protein n=1 Tax=Klebsiella pneumo...    48   9e-05

Sequences not found previously or not previously below threshold:

UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronoba...    46   4e-04
UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp...    45   7e-04
UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammapr...    45   0.001
UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX           44   0.001
UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterob...    43   0.003
UniRef50_B8EG05 Hok/gef cell toxic protein n=2 Tax=Shewanella ba...    41   0.012
UniRef50_Q1RBZ5 Putative uncharacterized protein hok n=1 Tax=Esc...    40   0.018
UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=...    40   0.018
UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio ...    39   0.063

>UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX
          Length = 52

 Score = 69.2 bits (168), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 33/48 (68%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          + +++  ++++CLT+++   +TRK LCE+R R G  EVA F AYE  +
Sbjct: 5  RSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAAFMAYESGK 52


>UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root RepID=C8TT42_ECO26
          Length = 70

 Score = 64.6 bits (156), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/51 (92%), Positives = 48/51 (94%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVF  YE E+
Sbjct: 20 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESEK 70


>UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9F578_ECOLX
          Length = 53

 Score = 63.4 bits (153), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 1  MKQQK-AMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEP 49
          MKQ K A+   L+++C T+++   +TR  LCEVR++ G  EV    AYE 
Sbjct: 1  MKQPKNALTWCLLIVCCTLLIFTYLTRNRLCEVRLKDGDREVTASLAYES 50


>UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID=C9Y3Z0_CROTZ
          Length = 52

 Score = 63.0 bits (152), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 31/48 (64%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          +  +   +++IC+T+++   +TR  LCE+R++ GQ E A F AYE  +
Sbjct: 5  RSTLFWCVLMICITLLMFTFLTRHSLCELRLKDGQREFAAFLAYESGK 52


>UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI
          Length = 50

 Score = 62.3 bits (150), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/50 (82%), Positives = 45/50 (90%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50
          MKQ KAM++ALIVIC+T +V ALVTRKDLCEV IRTGQTEVAVFTAYE E
Sbjct: 1  MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50


>UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Enterobacteriaceae
          RepID=D2TJU7_CITRO
          Length = 50

 Score = 59.6 bits (143), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/48 (45%), Positives = 32/48 (66%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          QK +L +LIVICLT+++   + R  LCE+ IR G  E+A F A E ++
Sbjct: 3  QKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACEVKQ 50


>UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax=Enterobacter
          cancerogenus ATCC 35316 RepID=UPI0001C3405D
          Length = 50

 Score = 56.9 bits (136), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 30/48 (62%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          ++A+L+ L +IC T+++   + R  LCE+  R  +TE+A   AYE + 
Sbjct: 3  KRALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAKR 50


>UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOKB_ECOLI
          Length = 49

 Score = 55.7 bits (133), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 28/48 (58%)

Query: 3  QQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50
          +   +++ L++IC+T++   L+TR+ L E+R R G  EVA   A    
Sbjct: 2  KHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALMACTSR 49


>UniRef50_B5RJZ0 Hok/Gef family protein n=1 Tax=Klebsiella pneumoniae 342
          RepID=B5RJZ0_KLEP3
          Length = 55

 Score = 48.0 bits (113), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 11/31 (35%), Positives = 20/31 (64%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRI 34
             +L  ++++CLT++    +TRK LCE+R 
Sbjct: 5  PSNLLWCVLIVCLTLLAFTYLTRKSLCEIRY 35


>UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronobacter
          RepID=A7MPJ9_ENTS8
          Length = 56

 Score = 46.1 bits (108), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 30/50 (60%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50
          MK    +L  L ++C+T+++ AL+ +  LCE+ IR+G  EVA   A   +
Sbjct: 7  MKPLHYLLACLFMVCITILIFALMNQGTLCELTIRSGSQEVAAKLACTGK 56


>UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449
           RepID=A4SUJ6_AERS4
          Length = 120

 Score = 45.3 bits (106), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 29/47 (61%)

Query: 5   KAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
           K  +++L+++C+T +    + R  LCE+ +  G+TE+ +  AYE + 
Sbjct: 74  KTAVVSLLIVCITALGVISLVRDSLCELEVHQGETEIRLNLAYEAKR 120


>UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria
          RepID=A7MEL1_ENTS8
          Length = 52

 Score = 44.5 bits (104), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 29/49 (59%)

Query: 3  QQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          +    +  +I++C+TVI+   ++R+ LCE+R+R    E+    A +P E
Sbjct: 4  KDNTFIWCIIIVCVTVIMFTTLSRETLCELRLRGAGMEIVASLACKPRE 52


>UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX
          Length = 50

 Score = 44.2 bits (103), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 28/48 (58%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          Q+  L+ LIVIC+T++    + R  LC +R++ G T +    AYE + 
Sbjct: 3  QRTFLMMLIVICVTILCFVWMVRDSLCGLRLQQGNTVLVATLAYEVKR 50


>UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae
          RepID=C9Y1C5_CROTZ
          Length = 50

 Score = 42.6 bits (99), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAY 47
          MK  K +    +V C+T+++ AL+    LCE+ I+ G  EVA   + 
Sbjct: 1  MKPLKYLFACFVVFCVTILIFALINHGTLCELTIKQGNKEVAARLSC 47


>UniRef50_B8EG05 Hok/gef cell toxic protein n=2 Tax=Shewanella baltica OS223
          RepID=B8EG05_SHEB2
          Length = 68

 Score = 41.1 bits (95), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 1  MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50
          M ++K   ++L ++C T++    + R DLC+V  R G   + V  AYE  
Sbjct: 18 MPKRKTTTLSLAIVCFTLLAALALIRDDLCKVEYRNGAMLLNVVLAYEVR 67


>UniRef50_Q1RBZ5 Putative uncharacterized protein hok n=1 Tax=Escherichia coli UTI89
           RepID=Q1RBZ5_ECOUT
          Length = 163

 Score = 40.3 bits (93), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 17  TVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50
           T++    +TR+ L E+R R G  EVA   A    
Sbjct: 131 TILTFT-LTRQSLYELRFRDGDKEVAALMACTSR 163


>UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=HOKE_ECO57
          Length = 50

 Score = 40.3 bits (93), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 26/44 (59%)

Query: 8  LIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPEE 51
          L+A+IV+CLTV+   L+    LCE  ++    E     AYEP++
Sbjct: 7  LVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK 50


>UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus
          RepID=Q8D675_VIBVU
          Length = 65

 Score = 38.8 bits (89), Expect = 0.063,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 28/47 (59%)

Query: 4  QKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFTAYEPE 50
          +K  L AL+V+C+T ++   +    LC++R +  Q ++++  AYE  
Sbjct: 19 KKTALAALVVVCITAVILTALYTGSLCDIRYKDQQNDLSIKLAYEVR 65


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.319    0.147    0.408 

Lambda     K      H
   0.267   0.0452    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 269,056,229
Number of Sequences: 3077464
Number of extensions: 6519791
Number of successful extensions: 27937
Number of sequences better than 1.0e-01: 21
Number of HSP's better than  0.1 without gapping: 57
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 27880
Number of HSP's gapped (non-prelim): 58
length of query: 51
length of database: 1,040,396,356
effective HSP length: 24
effective length of query: 27
effective length of database: 966,537,220
effective search space: 26096504940
effective search space used: 26096504940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.2 bits)
S2: 87 (38.0 bits)
