53 c3sahA_ Probab=94.45   E-value=0.17  Score=27.68  Aligned_columns=133  Identities=20%

Q ss_pred             CCCCCCCCCEEEEECCCCCCCCCCCE--EEEEEEEEEECCCEEEEEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHCCCC
Q ss_conf             87655698689998468999836277--8999999992797073244678862788898988898884899889850789
Q batch____         2 MNDGKQQSTFLFHDYETFGTHPALDR--PAQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGE   79 (475)
Q Consensus         2 ~~~~~~~~~fv~~D~ETTGldp~~d~--Iiqiaai~~d~~~~~i~e~~~~~v~p~~~~~~~p~a~~ItgIt~e~l~~~g~   79 (475)
                      |....+..+.+.+|+|..+.....+.  +|||+   +....-.|+                                 +.
T Consensus        93 ~~~~L~~~~~iaiD~E~~~~~ty~~~~cLiQIs---t~~~~yiID---------------------------------~l  136 (377)
T c3sahA_          93 LNEKLLNCQEFAVDLEHHSYRSFLGLTCLMQIS---TRTEDFIID---------------------------------TL  136 (377)
T ss_dssp             HHHHHHTCSEEEEEEEEECTTCSSCEEEEEEEE---CSSCEEEEE---------------------------------TT
T ss_pred             HHHHHHCCCEEEEEEEEECCCCCCCEEEEEEEE---ECCCCEEEE---------------------------------CC
T ss_conf             999974398047888871155508846999985---289318994---------------------------------55


Q ss_pred             CHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             95899999999960599899971865674899999999728872212335666432066499999986211022333235
Q batch____        80 NEAAFAARIHSLFTVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDD  159 (475)
Q Consensus        80 ~e~e~l~~i~~~l~~~~~iiVghN~i~FD~~fL~~~f~R~~~~p~~~~~~~~~~~~d~ldt~rl~~~l~p~~~~wp~~~~  159 (475)
                      ...+.+..+.+.|..++.+-|+|++ ..|..+|.+.|              |.....++||..+++.+            
T Consensus       137 ~l~~~l~~L~~i~~~~~I~KV~H~~-~~Di~~L~~~~--------------g~~~~n~fDt~~A~~~l------------  189 (377)
T c3sahA_         137 ELRSDMYILNESLTDPAIVKVFHGA-DSDIEWLQKDF--------------GLYVVNMFDTHQAARLL------------  189 (377)
T ss_dssp             TTGGGGGGGHHHHTCTTSEEEESSC-HHHHHHHHHHT--------------CCCCSSEEEHHHHHHHH------------
T ss_pred             CCCHHHHHHHHHHCCCCEEEEEEEC-HHHHHHHHHHC--------------CCCCCCCCCHHHHHHHH------------
T ss_conf             5430237889985599858998514-15699999983--------------99341430278999880------------


Q ss_pred             CCCCCCHHHHHHHH-----------------CCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             87778989999982-----------------788757889589999999999999885
Q batch____       160 GLPSFRLEHLTKAN-----------------GIEHSNAHDVMADVYATIAMAKLVKTR  200 (475)
Q Consensus       160 g~~s~kLe~La~~~-----------------gI~~~~AHdAl~Dv~AT~~lak~l~~~  200 (475)
                         .+.|..|++.|                 -++..+-+=|..||..-+.+...++.+
T Consensus       190 ---g~~L~~L~~~~~~~~l~K~~q~sDW~~RPLs~~ql~YAa~Dv~yLl~iy~~l~~~  244 (377)
T c3sahA_         190 ---NHSLDHLLKLYCNVDSNKQYQLADWRIRPLPEEMLSAARDDTHYLLYIYDKMRLE  244 (377)
T ss_dssp             ---CCTHHHHHHHHSCCCCGGGGCCCCTTCSSCCHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             ---CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf             ---9838999999818857843401233238989899999760610699999999999