56 c2cyaA_ Probab=97.87   E-value=2.1e-05  Score=53.20  Aligned_columns=190  Identities=13%

Q ss_pred             ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHH
Q ss_conf             13899996662105799999999999998579809997076864048999999724530244075653678998998402
Q batch____       119 YSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKK  198 (577)
Q Consensus       119 ~~SpNPtGpLHIGH~R~av~gD~laR~lr~~G~~V~~~~~idD~G~qi~~~a~~~~~~~~e~~~~~~~~~~~~~y~~~~~  198 (577)
                      |+.--|||+|||||    +++=...+.+.-.|+++..                                .+.+.......
T Consensus        36 y~G~~PTg~lHlG~----~i~~~~~~~~~~~g~~~~~--------------------------------lIaD~~a~~~d   79 (328)
T c2cyaA_          36 YIGYEPSGVAHIGW----LVWMYKVKDLVEAGVDFSV--------------------------------LEATWHAYIND   79 (328)
T ss_dssp             EEEECCCSSCBTHH----HHHHHHHHHHHHTTCEEEE--------------------------------EECHHHHHHTT
T ss_pred             EEEECCCCCCCHHH----HHHHHHHHHHHHCCCCEEE--------------------------------EECCHHHHHCC
T ss_conf             98005688340778----9999999999977993899--------------------------------97183565268


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHHHHHHHHHHHHHHHCCCE
Q ss_conf             03578889999999999998298899999999999999999999997499668556012110233468999999867984
Q batch____       199 HYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLA  278 (577)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~e~~~~~~~~~~~~~l~~~~~~  278 (577)
                      ....+....+...+.+...                         +..+++......+...+.+.....-......-....
T Consensus        80 ~~~~~~~~~~~~~~~~~~~-------------------------~~a~g~~~~k~~~~~~S~~~~~~~~~~~~~~l~~~~  134 (328)
T c2cyaA_          80 KLGGDMDLIRAAARIVRRV-------------------------MEAAGVPVERVRFVDAEELASDKDYWGLVIRVAKRA  134 (328)
T ss_dssp             GGGGCHHHHHHHHHHHHHH-------------------------HHHTTCCGGGCEEEEHHHHHTCHHHHHHHHHHHHTS
T ss_pred             CCCCCHHHHHHHHHHHHHH-------------------------HHHCCCCHHHEEEEECCCHHHHHHHHHHHHHHHCCC
T ss_conf             8899989976329999999-------------------------997177945689873630112578999998641010


Q ss_pred             ECCCCCEEEECCCCCCCCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCC
Q ss_conf             85389666623115567456887368646980420001233504676301898699975690325589999999974989
Q batch____       279 VESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYV  358 (577)
Q Consensus       279 ~~~dga~~~~~~~~~~~~~~~~d~vl~rsdG~~~Y~~~dia~~~~k~~~~~~d~~i~v~g~d~~~~~~~~~~~l~~lg~~  358 (577)
                      ....-..+.......+.             |..+|-.--.+      ..+.....+-++|.||.+|+....-++..+++.
T Consensus       135 ~~~~~~~~~~~~~~~~~-------------~~~~YP~lQaa------Dil~~~~~i~~~G~DQ~~~~~l~rd~~~~~~~~  195 (328)
T c2cyaA_         135 SLARVRRALAEEAEVDA-------------SKLIYPLMQVS------DIFYMDLDIALGGMDQRKAHMLARDVAEKLGRK  195 (328)
T ss_dssp             CHHHHHTTCCCGGGSCT-------------HHHHHHHHHHH------HHHHTTCSEEEEEGGGHHHHHHHHHHHTTTTCC
T ss_pred             CHHHHHHHHCCCCCCCH-------------HHHHHHHHHHH------HHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCC
T ss_conf             29999986404678749-------------99999998753------665258988998322225899999999972987


Q ss_pred             CCCCEEEEEEEEEEECCCC-CCCCCCCCC-EEEHHH
Q ss_conf             7433289954333666788-431002585-346999
Q batch____       359 PESVPLEHHMFGMMLGKDG-KPFKTRAGG-TVKLAD  392 (577)
Q Consensus       359 ~~~~~~~h~~~~~v~~~dG-~KMSkr~Gn-~v~l~d  392 (577)
                      .+    .+....++.+.+| +|||||.++ .|.+.|
T Consensus       196 ~~----~~i~~pll~~l~G~~KMSkS~~~s~I~l~D  227 (328)
T c2cyaA_         196 KP----VAIHTPIISSLQGPVKMSKSKPETAVFVVD  227 (328)
T ss_dssp             CC----EEEEECCCBCSSCCCBCCSSSGGGSCBTTC
T ss_pred             CC----EEEEECCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf             84----577511234677877788888884588338