Phyre 2 alignment of P11875 with d2dexx3

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Job Description | P11875
Confidence | 56.95% | Date | Thu Jan 5 11:32:57 GMT 2012
Rank | 103 | Aligned Residues | 39
% Identity | 18% | Template | d2dexx3
SCOP info | Pentein, beta/alpha-propeller | Pentein | Peptidylarginine deiminase Pad4, catalytic C-terminal domain
Resolution | 2.10

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | D | Y | S | A | P | N | V | A | K | E | M | H | V | G | H | L | R | S | T | I | I | G | D | A | A | V | R | T | L | E | F | L | G | H | K | V | I | R | A | N | H | V | G | D | W
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |
Template Sequence |  | H | L | G | I | P | K | P | F | G | P | V | I | N | G | R | C | . | . | . | C | L | E | E | K | V | C | S | L | L | E | P | L | G | L | Q | C | T | F | . | . | . | I | N | D | F
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  | . | . | . |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 595 | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 |  |  |  | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . |  |  |  | 630 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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