Phyre 2 alignment of P11875 with c1r6uB_

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Job Description | P11875
Confidence | 78.40% | Date | Thu Jan 5 11:32:57 GMT 2012
Rank | 97 | Aligned Residues | 40
% Identity | 23% | Template | c1r6uB_
PDB info | PDB header:ligase | Chain: B: PDB Molecule:tryptophanyl-trna synthetase; | PDBTitle: crystal structure of an active fragment of human tryptophanyl-trna2 synthetase with cytokine activity
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | K | Q | T | I | V | V | D | Y | S | A | P | N | V | A | K | E | M | . | H | V | G | H | L | R | S | T | I | I | G | D | A | A | V | R | T | L | E | F | L | G | H | K | V | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | N | K | K | P | F | Y | L | . | Y | T | G | R | G | P | S | S | E | A | X | H | V | G | H | L | I | P | F | I | F | . | . | . | T | K | W | L | Q | D | V | F | N | V | P | L | V
Template Known Secondary structure |  | T | T |  |  |  |  |  | . |  |  |  |  |  |  |  | S | S |  |  | B | G | G | G |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  | T |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 152 | . | . | . | . | . | . |  | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . |  |  |  | 180 | . | . | . | . | . | . | . | . | . | 190 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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