BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (128 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P18006 Protein trbI n=35 Tax=root RepID=TRBI_ECOLI 262 3e-69 UniRef50_D0R7E9 Conjugative transfer protein n=5 Tax=Salmonella ... 217 7e-56 UniRef50_A4TSZ0 Conjugative transfer protein n=6 Tax=Enterobacte... 135 3e-31 UniRef50_A4SUD4 Conjugative transfer protein TrbI n=1 Tax=Aeromo... 107 1e-22 UniRef50_B6ICF7 TrbI protein n=1 Tax=Escherichia coli SE11 RepID... 105 4e-22 UniRef50_A4WGS8 Putative uncharacterized protein n=1 Tax=Enterob... 91 8e-18 UniRef50_C8QDS0 Type-F conjugative transfer system protein TrbI ... 90 2e-17 UniRef50_B2VB12 Conjugative transfer protein n=1 Tax=Erwinia tas... 65 6e-10 UniRef50_A5KZG0 Conjugative transfer n=1 Tax=Vibrionales bacteri... 61 1e-08 UniRef50_B6ESY0 Conjugative transfer protein TrbI (Trbi) n=1 Tax... 57 2e-07 UniRef50_Q8D697 Putative uncharacterized protein n=1 Tax=Vibrio ... 47 2e-04 UniRef50_Q4LC35 TrbI protein n=2 Tax=Sodalis glossinidius RepID=... 46 3e-04 UniRef50_D2TZZ6 Conjugal transfer protein TrbI n=1 Tax=Arsenopho... 45 6e-04 UniRef50_B8EG16 Conjugal transfer protein TrbI n=6 Tax=Shewanell... 45 6e-04 UniRef50_Q1MY38 Putative uncharacterized protein n=1 Tax=Bermane... 42 0.005 UniRef50_A8QYQ4 TrbI protein n=2 Tax=Legionellaceae RepID=A8QYQ4... 39 0.037 UniRef50_Q3IUW2 Sex-pilus assembly protein n=1 Tax=Rhodobacter s... 38 0.088 >UniRef50_P18006 Protein trbI n=35 Tax=root RepID=TRBI_ECOLI Length = 128 Score = 262 bits (669), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 128/128 (100%), Positives = 128/128 (100%) Query: 1 MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF 60 MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF Sbjct: 1 MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF 60 Query: 61 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI 120 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI Sbjct: 61 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI 120 Query: 121 ARRMRAEP 128 ARRMRAEP Sbjct: 121 ARRMRAEP 128 >UniRef50_D0R7E9 Conjugative transfer protein n=5 Tax=Salmonella enterica RepID=D0R7E9_SALTD Length = 128 Score = 217 bits (553), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 102/128 (79%), Positives = 112/128 (87%) Query: 1 MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF 60 MS+ QK D T R+ W +PGCL MV+LNAA+SYGIVRLN PVTVAFNMKQTVDAFF Sbjct: 1 MSTKQKQTDGTGARKRDGLWMIPGCLGMVVLNAAISYGIVRLNTPVTVAFNMKQTVDAFF 60 Query: 61 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI 120 DSA QK+L+EAQSKALS RFN ALEASLQAWQ++HHAVILVSPAVVQGAPDI+REIQQDI Sbjct: 61 DSAGQKKLTEAQSKALSGRFNAALEASLQAWQREHHAVILVSPAVVQGAPDITREIQQDI 120 Query: 121 ARRMRAEP 128 ARRMRAEP Sbjct: 121 ARRMRAEP 128 >UniRef50_A4TSZ0 Conjugative transfer protein n=6 Tax=Enterobacteriaceae RepID=A4TSZ0_YERPP Length = 115 Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 67/104 (64%), Positives = 83/104 (79%), Gaps = 3/104 (2%) Query: 22 VPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFN 81 + G LA +A VS+ + +LN PV VAFNMK TVDAFFDSA ++ L EAQ+KALS RFN Sbjct: 12 IAGTLAA---SAGVSWLVCQLNRPVVVAFNMKSTVDAFFDSAGRRSLDEAQTKALSDRFN 68 Query: 82 TALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMR 125 +LEASL+ WQ +H A+ILV+PAVVQGAPDI+REIQ D+ARRM+ Sbjct: 69 ASLEASLRDWQIRHRALILVAPAVVQGAPDITREIQTDVARRMK 112 >UniRef50_A4SUD4 Conjugative transfer protein TrbI n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUD4_AERS4 Length = 145 Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/118 (48%), Positives = 77/118 (65%), Gaps = 1/118 (0%) Query: 10 VTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLS 69 +A RR+ W + + LN A + + P VAF+MK T+D F + ++ + L+ Sbjct: 16 TSAPRRTGRGWML-ALAVLTALNLAATGWLALHRTPTPVAFDMKGTIDQFMEQSASQSLT 74 Query: 70 EAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 EAQSK L ARF AL+ASL WQQ+H A+ILVSP+VV+GA DI+R IQ DIA RMRA+ Sbjct: 75 EAQSKQLVARFTQALDASLSVWQQEHRALILVSPSVVRGADDITRTIQHDIATRMRAQ 132 >UniRef50_B6ICF7 TrbI protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF7_ECOSE Length = 138 Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 56/112 (50%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Query: 14 RRSHWWWTVPGCLA-MVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQ 72 RR + +V G +A +++LNA VS + PV V+F+M TV++F A+ + L EAQ Sbjct: 23 RRRRYLKSVAGVVAGIIVLNAGVSLLLTEWRQPVMVSFDMAGTVNSFMSQAAAQALDEAQ 82 Query: 73 SKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRM 124 KAL+ARFN AL SL A+Q+ H AVI+V+PAVV GA DI+ EIQQ +A RM Sbjct: 83 IKALTARFNRALSDSLTAYQRDHRAVIIVAPAVVGGAEDITAEIQQSVAARM 134 >UniRef50_A4WGS8 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGS8_ENT38 Length = 138 Score = 91.3 bits (225), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 43/92 (46%), Positives = 61/92 (66%) Query: 34 AVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQ 93 V+Y + P V F+MK TVD F ++Q L E ++K L++RFNTAL SL AWQ Sbjct: 44 GVAYVTAKAVTPDVVVFDMKGTVDLFMQQSAQLNLDEGKAKVLTSRFNTALSDSLNAWQT 103 Query: 94 KHHAVILVSPAVVQGAPDISREIQQDIARRMR 125 H+A+ILV PAV+ PDI+ +I+ DI+RR++ Sbjct: 104 SHNAIILVKPAVMSPQPDITADIRSDISRRIQ 135 >UniRef50_C8QDS0 Type-F conjugative transfer system protein TrbI n=2 Tax=Pantoea sp. At-9b RepID=C8QDS0_9ENTR Length = 148 Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 47/98 (47%), Positives = 58/98 (59%) Query: 31 LNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQA 90 L+A +S + R P V F+MK T+D F +Q L+ L+ARF TAL ASL Sbjct: 51 LSAGISALVARTLQPAYVVFDMKGTLDTFRQQTAQTPLTIEAIATLTARFGTALNASLTG 110 Query: 91 WQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAEP 128 WQ H VILV AVV G PDI+ EIQ DIAR+M+ P Sbjct: 111 WQAAHGGVILVKGAVVSGVPDITPEIQADIARQMQGTP 148 >UniRef50_B2VB12 Conjugative transfer protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB12_ERWT9 Length = 137 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 30/115 (26%), Positives = 66/115 (57%), Gaps = 3/115 (2%) Query: 15 RSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQ--KQLSEAQ 72 + +W + + +++ + IVR+N P V F++K T D F + K+ + Sbjct: 23 KGYWILILSAVFFIFIISFVTATVIVRVNQPKIVTFDLKSTTDDFVQKTAMLGKKATPKD 82 Query: 73 SKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 + L+A F +++ +L ++++ + +++V PAV++GA DI+ E++++I R +R E Sbjct: 83 VEELTAIFKQSMQDTLDMYERQGY-IVMVKPAVMKGAKDITDEVRENIYRNIRGE 136 >UniRef50_A5KZG0 Conjugative transfer n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZG0_9GAMM Length = 115 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%) Query: 20 WTVPGCLAMVLLNAAVSYGIVRLN-APVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSA 78 + V LA+ L+ + ++LN AP V F+++QT+ + D + L + + A A Sbjct: 8 YLVYALLAIALM--MFTLIAIKLNTAPQIVVFDIEQTLSQYQDQLIEANLDDQEHNAQLA 65 Query: 79 RFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 F+T L L+ + Q HH VILV A++ GAPD + EIQ + ++ E Sbjct: 66 TFDTDLRRLLKEYAQAHHLVILVPGALISGAPDRTTEIQHYVIEALKKE 114 >UniRef50_B6ESY0 Conjugative transfer protein TrbI (Trbi) n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ESY0_ALISL Length = 115 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 5/107 (4%) Query: 19 WWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSA 78 W + CL V L+ +V I R P F++K+T+ F +K +++A+ +A Sbjct: 9 WLLIGACL--VSLSVSVLTLITR---PSVAVFDVKRTLTQFQHQLIEKGVTQAEHQAYLT 63 Query: 79 RFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMR 125 F ALE + + Q+H+ +IL +PAVV GA DI+ +QQ I + + Sbjct: 64 HFAQALERATAQYSQEHNVLILTTPAVVAGADDITTVLQQHIIEQYQ 110 >UniRef50_Q8D697 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus RepID=Q8D697_VIBVU Length = 114 Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/78 (33%), Positives = 51/78 (65%), Gaps = 2/78 (2%) Query: 44 APVTVAFNMKQTVDAFFDSASQKQLS-EAQSKALSARFNTALEASLQAWQQKHHAVILVS 102 +P V+ ++K T++A+ + +K++S E Q+K L+ +F + ++A+ +H+ + LVS Sbjct: 30 SPTFVSVDVKSTLNAYHQALIKKEMSLEEQTKRLT-QFAGIMHEEIEAYNAQHNTIALVS 88 Query: 103 PAVVQGAPDISREIQQDI 120 AVV GA D++ +IQ+ I Sbjct: 89 AAVVGGAVDVTPQIQRAI 106 >UniRef50_Q4LC35 TrbI protein n=2 Tax=Sodalis glossinidius RepID=Q4LC35_SODGL Length = 98 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/38 (57%), Positives = 32/38 (84%) Query: 48 VAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALE 85 V F+MKQT+ AF+ SA+++ L+ A+S+ALSARFN AL+ Sbjct: 44 VRFDMKQTMAAFYLSAAKQSLTPARSEALSARFNEALQ 81 >UniRef50_D2TZZ6 Conjugal transfer protein TrbI n=1 Tax=Arsenophonus nasoniae RepID=D2TZZ6_9ENTR Length = 76 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 52 MKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPD 111 MK+T D F S+ LS+ + L R+N L+ L+ Q VILV+ AV+ GA D Sbjct: 1 MKKTTDRFLLQVSKLDLSDEKKDQLIERYNNTLKRVLEKNIQ-GKTVILVNSAVMAGAVD 59 Query: 112 ISREIQQDIARRMR 125 + +IQ+ IA M+ Sbjct: 60 KTADIQKQIAEAMK 73 >UniRef50_B8EG16 Conjugal transfer protein TrbI n=6 Tax=Shewanella baltica RepID=B8EG16_SHEB2 Length = 123 Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 61/106 (57%), Gaps = 2/106 (1%) Query: 22 VPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFN 81 + L +V L ++ + R P V +++ +TV +F S Q +LS+ Q + RF Sbjct: 6 IQSILWLVTLGVMITLWVTR--EPRVVEYDINETVASFHQSIGQSELSDEQREKEITRFT 63 Query: 82 TALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 L+ +Q + +H V+LVSPAVV GA ++++EIQQ + + ++A+ Sbjct: 64 QTLDDVVQQYALDNHVVVLVSPAVVSGAVNVTQEIQQSLLQTLQAQ 109 >UniRef50_Q1MY38 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1MY38_9GAMM Length = 112 Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 54/100 (54%), Gaps = 2/100 (2%) Query: 29 VLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQK-QLSEAQSKALSARFNTALEAS 87 VL++ A S+ +V+L P + ++ + +D K ++++ + S F+ +E + Sbjct: 14 VLVSLASSFLVVKLMVPEIKSVSLDKLLDNHIAQVKTKYEMTDEEVNTYSEAFSLQVEKT 73 Query: 88 LQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 L A+ + +I+VSPAVV+G DI+ ++ I + ++ Sbjct: 74 LDAYGEGD-TIIIVSPAVVRGTTDITDDVYASILENIESK 112 >UniRef50_A8QYQ4 TrbI protein n=2 Tax=Legionellaceae RepID=A8QYQ4_9GAMM Length = 111 Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 2/91 (2%) Query: 35 VSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQK 94 +SYG V+ P+ V FN ++ + F ++ + +E+Q + + RFN L L Q+ Sbjct: 20 LSYG-VKPKEPI-VIFNKEEVLSQFIRQLAEIKATESQVEQSTRRFNALLNKVLVELAQQ 77 Query: 95 HHAVILVSPAVVQGAPDISREIQQDIARRMR 125 +IL V G DI+ E++ ++ MR Sbjct: 78 KKVIILRKNDVFAGGIDITDEVRIRLSHAMR 108 >UniRef50_Q3IUW2 Sex-pilus assembly protein n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW2_RHOS4 Length = 119 Score = 38.1 bits (87), Expect = 0.088, Method: Compositional matrix adjust. Identities = 19/66 (28%), Positives = 36/66 (54%) Query: 60 FDSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQD 119 F A K++ + +A + + LEA++ + +H +++ S V+ GAPDI++E+ Q Sbjct: 48 FIRAGGKEMPDTDYEAAAKIYQADLEAAIADFAAEHSVIVVNSATVLAGAPDITQEVSQK 107 Query: 120 IARRMR 125 R R Sbjct: 108 ALARWR 113 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D0R7E9 Conjugative transfer protein n=5 Tax=Salmonella ... 176 2e-43 UniRef50_P18006 Protein trbI n=35 Tax=root RepID=TRBI_ECOLI 172 3e-42 UniRef50_A4SUD4 Conjugative transfer protein TrbI n=1 Tax=Aeromo... 128 5e-29 UniRef50_B2VB12 Conjugative transfer protein n=1 Tax=Erwinia tas... 126 2e-28 UniRef50_B6ICF7 TrbI protein n=1 Tax=Escherichia coli SE11 RepID... 125 4e-28 UniRef50_A4TSZ0 Conjugative transfer protein n=6 Tax=Enterobacte... 123 2e-27 UniRef50_C8QDS0 Type-F conjugative transfer system protein TrbI ... 119 4e-26 UniRef50_A4WGS8 Putative uncharacterized protein n=1 Tax=Enterob... 116 3e-25 UniRef50_A5KZG0 Conjugative transfer n=1 Tax=Vibrionales bacteri... 111 7e-24 UniRef50_B6ESY0 Conjugative transfer protein TrbI (Trbi) n=1 Tax... 103 2e-21 UniRef50_B8EG16 Conjugal transfer protein TrbI n=6 Tax=Shewanell... 89 4e-17 UniRef50_Q8D697 Putative uncharacterized protein n=1 Tax=Vibrio ... 88 9e-17 UniRef50_D2TZZ6 Conjugal transfer protein TrbI n=1 Tax=Arsenopho... 79 4e-14 UniRef50_Q4LC35 TrbI protein n=2 Tax=Sodalis glossinidius RepID=... 50 2e-05 Sequences not found previously or not previously below threshold: UniRef50_A8QYQ4 TrbI protein n=2 Tax=Legionellaceae RepID=A8QYQ4... 66 4e-10 UniRef50_Q1MY38 Putative uncharacterized protein n=1 Tax=Bermane... 61 1e-08 UniRef50_C9NPU4 Putative uncharacterized protein n=1 Tax=Vibrio ... 59 5e-08 UniRef50_Q3IUW2 Sex-pilus assembly protein n=1 Tax=Rhodobacter s... 48 9e-05 UniRef50_O85940 Conjugal transfer protein n=5 Tax=Sphingomonadac... 47 1e-04 UniRef50_Q0F364 Putative uncharacterized protein n=1 Tax=Maripro... 47 1e-04 UniRef50_D1RMN7 Type-F conjugative transfer system protein TrbI ... 47 2e-04 UniRef50_A5PDJ0 Putative uncharacterized protein n=1 Tax=Erythro... 46 4e-04 UniRef50_Q2G6C0 Putative uncharacterized protein n=1 Tax=Novosph... 43 0.003 UniRef50_Q8A7A6 SusC homolog n=7 Tax=Bacteroides RepID=Q8A7A6_BACTN 42 0.004 UniRef50_Q2NDH3 Putative uncharacterized protein n=4 Tax=Erythro... 42 0.006 UniRef50_Q1N8Z8 Putative uncharacterized protein n=1 Tax=Sphingo... 42 0.008 >UniRef50_D0R7E9 Conjugative transfer protein n=5 Tax=Salmonella enterica RepID=D0R7E9_SALTD Length = 128 Score = 176 bits (446), Expect = 2e-43, Method: Composition-based stats. Identities = 102/128 (79%), Positives = 112/128 (87%) Query: 1 MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF 60 MS+ QK D T R+ W +PGCL MV+LNAA+SYGIVRLN PVTVAFNMKQTVDAFF Sbjct: 1 MSTKQKQTDGTGARKRDGLWMIPGCLGMVVLNAAISYGIVRLNTPVTVAFNMKQTVDAFF 60 Query: 61 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI 120 DSA QK+L+EAQSKALS RFN ALEASLQAWQ++HHAVILVSPAVVQGAPDI+REIQQDI Sbjct: 61 DSAGQKKLTEAQSKALSGRFNAALEASLQAWQREHHAVILVSPAVVQGAPDITREIQQDI 120 Query: 121 ARRMRAEP 128 ARRMRAEP Sbjct: 121 ARRMRAEP 128 >UniRef50_P18006 Protein trbI n=35 Tax=root RepID=TRBI_ECOLI Length = 128 Score = 172 bits (436), Expect = 3e-42, Method: Composition-based stats. Identities = 128/128 (100%), Positives = 128/128 (100%) Query: 1 MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF 60 MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF Sbjct: 1 MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF 60 Query: 61 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI 120 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI Sbjct: 61 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI 120 Query: 121 ARRMRAEP 128 ARRMRAEP Sbjct: 121 ARRMRAEP 128 >UniRef50_A4SUD4 Conjugative transfer protein TrbI n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUD4_AERS4 Length = 145 Score = 128 bits (322), Expect = 5e-29, Method: Composition-based stats. Identities = 57/118 (48%), Positives = 77/118 (65%), Gaps = 1/118 (0%) Query: 10 VTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLS 69 +A RR+ W + + LN A + + P VAF+MK T+D F + ++ + L+ Sbjct: 16 TSAPRRTGRGWML-ALAVLTALNLAATGWLALHRTPTPVAFDMKGTIDQFMEQSASQSLT 74 Query: 70 EAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 EAQSK L ARF AL+ASL WQQ+H A+ILVSP+VV+GA DI+R IQ DIA RMRA+ Sbjct: 75 EAQSKQLVARFTQALDASLSVWQQEHRALILVSPSVVRGADDITRTIQHDIATRMRAQ 132 >UniRef50_B2VB12 Conjugative transfer protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB12_ERWT9 Length = 137 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 66/115 (57%), Gaps = 3/115 (2%) Query: 15 RSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQ--KQLSEAQ 72 + +W + + +++ + IVR+N P V F++K T D F + K+ + Sbjct: 23 KGYWILILSAVFFIFIISFVTATVIVRVNQPKIVTFDLKSTTDDFVQKTAMLGKKATPKD 82 Query: 73 SKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 + L+A F +++ +L ++++ + +++V PAV++GA DI+ E++++I R +R E Sbjct: 83 VEELTAIFKQSMQDTLDMYERQGY-IVMVKPAVMKGAKDITDEVRENIYRNIRGE 136 >UniRef50_B6ICF7 TrbI protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF7_ECOSE Length = 138 Score = 125 bits (314), Expect = 4e-28, Method: Composition-based stats. Identities = 57/124 (45%), Positives = 80/124 (64%), Gaps = 1/124 (0%) Query: 2 SSTQKPADVTAERRSHWWWTVPGCLA-MVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF 60 + T + + RR + +V G +A +++LNA VS + PV V+F+M TV++F Sbjct: 11 AGTPEKSPAKCSRRRRYLKSVAGVVAGIIVLNAGVSLLLTEWRQPVMVSFDMAGTVNSFM 70 Query: 61 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI 120 A+ + L EAQ KAL+ARFN AL SL A+Q+ H AVI+V+PAVV GA DI+ EIQQ + Sbjct: 71 SQAAAQALDEAQIKALTARFNRALSDSLTAYQRDHRAVIIVAPAVVGGAEDITAEIQQSV 130 Query: 121 ARRM 124 A RM Sbjct: 131 AARM 134 >UniRef50_A4TSZ0 Conjugative transfer protein n=6 Tax=Enterobacteriaceae RepID=A4TSZ0_YERPP Length = 115 Score = 123 bits (308), Expect = 2e-27, Method: Composition-based stats. Identities = 65/111 (58%), Positives = 82/111 (73%) Query: 15 RSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSK 74 + H + +A VS+ + +LN PV VAFNMK TVDAFFDSA ++ L EAQ+K Sbjct: 2 KKHVLINAALIAGTLAASAGVSWLVCQLNRPVVVAFNMKSTVDAFFDSAGRRSLDEAQTK 61 Query: 75 ALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMR 125 ALS RFN +LEASL+ WQ +H A+ILV+PAVVQGAPDI+REIQ D+ARRM+ Sbjct: 62 ALSDRFNASLEASLRDWQIRHRALILVAPAVVQGAPDITREIQTDVARRMK 112 >UniRef50_C8QDS0 Type-F conjugative transfer system protein TrbI n=2 Tax=Pantoea sp. At-9b RepID=C8QDS0_9ENTR Length = 148 Score = 119 bits (297), Expect = 4e-26, Method: Composition-based stats. Identities = 48/117 (41%), Positives = 62/117 (52%) Query: 12 AERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEA 71 + R ++ L+A +S + R P V F+MK T+D F +Q L+ Sbjct: 32 SPVRGRVIRIAALATVVMALSAGISALVARTLQPAYVVFDMKGTLDTFRQQTAQTPLTIE 91 Query: 72 QSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAEP 128 L+ARF TAL ASL WQ H VILV AVV G PDI+ EIQ DIAR+M+ P Sbjct: 92 AIATLTARFGTALNASLTGWQAAHGGVILVKGAVVSGVPDITPEIQADIARQMQGTP 148 >UniRef50_A4WGS8 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGS8_ENT38 Length = 138 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 9/132 (6%) Query: 3 STQKPADVTAERRS---------HWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMK 53 + +KP D + R W + A +L V+Y + P V F+MK Sbjct: 4 NNEKPYDAESVRDGVTIATFFASRWVKGLLLGGAGLLAMTGVAYVTAKAVTPDVVVFDMK 63 Query: 54 QTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDIS 113 TVD F ++Q L E ++K L++RFNTAL SL AWQ H+A+ILV PAV+ PDI+ Sbjct: 64 GTVDLFMQQSAQLNLDEGKAKVLTSRFNTALSDSLNAWQTSHNAIILVKPAVMSPQPDIT 123 Query: 114 REIQQDIARRMR 125 +I+ DI+RR++ Sbjct: 124 ADIRSDISRRIQ 135 >UniRef50_A5KZG0 Conjugative transfer n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZG0_9GAMM Length = 115 Score = 111 bits (277), Expect = 7e-24, Method: Composition-based stats. Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 3/109 (2%) Query: 20 WTVPGCLAMVLLNAAVSYGIVRLNA-PVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSA 78 + V LA+ L+ + ++LN P V F+++QT+ + D + L + + A A Sbjct: 8 YLVYALLAIALM--MFTLIAIKLNTAPQIVVFDIEQTLSQYQDQLIEANLDDQEHNAQLA 65 Query: 79 RFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 F+T L L+ + Q HH VILV A++ GAPD + EIQ + ++ E Sbjct: 66 TFDTDLRRLLKEYAQAHHLVILVPGALISGAPDRTTEIQHYVIEALKKE 114 >UniRef50_B6ESY0 Conjugative transfer protein TrbI (Trbi) n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ESY0_ALISL Length = 115 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 5/107 (4%) Query: 19 WWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSA 78 W + CL V L+ +V I R P F++K+T+ F +K +++A+ +A Sbjct: 9 WLLIGACL--VSLSVSVLTLITR---PSVAVFDVKRTLTQFQHQLIEKGVTQAEHQAYLT 63 Query: 79 RFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMR 125 F ALE + + Q+H+ +IL +PAVV GA DI+ +QQ I + + Sbjct: 64 HFAQALERATAQYSQEHNVLILTTPAVVAGADDITTVLQQHIIEQYQ 110 >UniRef50_B8EG16 Conjugal transfer protein TrbI n=6 Tax=Shewanella baltica RepID=B8EG16_SHEB2 Length = 123 Score = 89.0 bits (219), Expect = 4e-17, Method: Composition-based stats. Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 2/107 (1%) Query: 21 TVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARF 80 + L +V L ++ + R P V +++ +TV +F S Q +LS+ Q + RF Sbjct: 5 IIQSILWLVTLGVMITLWVTR--EPRVVEYDINETVASFHQSIGQSELSDEQREKEITRF 62 Query: 81 NTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 L+ +Q + +H V+LVSPAVV GA ++++EIQQ + + ++A+ Sbjct: 63 TQTLDDVVQQYALDNHVVVLVSPAVVSGAVNVTQEIQQSLLQTLQAQ 109 >UniRef50_Q8D697 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus RepID=Q8D697_VIBVU Length = 114 Score = 87.8 bits (216), Expect = 9e-17, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 56/105 (53%) Query: 21 TVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARF 80 + +++ L+ ++ + +P V+ ++K T++A+ + +K++S + +F Sbjct: 7 MIAMMVSISALSTLTAHTFLSQPSPTFVSVDVKSTLNAYHQALIKKEMSLEEQTKRLTQF 66 Query: 81 NTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMR 125 + ++A+ +H+ + LVS AVV GA D++ +IQ+ I + Sbjct: 67 AGIMHEEIEAYNAQHNTIALVSAAVVGGAVDVTPQIQRAIIEHYQ 111 >UniRef50_D2TZZ6 Conjugal transfer protein TrbI n=1 Tax=Arsenophonus nasoniae RepID=D2TZZ6_9ENTR Length = 76 Score = 79.0 bits (193), Expect = 4e-14, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 52 MKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPD 111 MK+T D F S+ LS+ + L R+N L+ L+ Q VILV+ AV+ GA D Sbjct: 1 MKKTTDRFLLQVSKLDLSDEKKDQLIERYNNTLKRVLEKNIQ-GKTVILVNSAVMAGAVD 59 Query: 112 ISREIQQDIARRMR 125 + +IQ+ IA M+ Sbjct: 60 KTADIQKQIAEAMK 73 >UniRef50_A8QYQ4 TrbI protein n=2 Tax=Legionellaceae RepID=A8QYQ4_9GAMM Length = 111 Score = 65.9 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 1/108 (0%) Query: 18 WWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALS 77 + + + + V+ P V FN ++ + F ++ + +E+Q + + Sbjct: 2 RLIPITASFVLAIFGFFILSYGVKPKEP-IVIFNKEEVLSQFIRQLAEIKATESQVEQST 60 Query: 78 ARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMR 125 RFN L L Q+ +IL V G DI+ E++ ++ MR Sbjct: 61 RRFNALLNKVLVELAQQKKVIILRKNDVFAGGIDITDEVRIRLSHAMR 108 >UniRef50_Q1MY38 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1MY38_9GAMM Length = 112 Score = 61.3 bits (147), Expect = 1e-08, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 55/108 (50%), Gaps = 2/108 (1%) Query: 21 TVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQK-QLSEAQSKALSAR 79 V VL++ A S+ +V+L P + ++ + +D K ++++ + S Sbjct: 6 LVFTLGISVLVSLASSFLVVKLMVPEIKSVSLDKLLDNHIAQVKTKYEMTDEEVNTYSEA 65 Query: 80 FNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 F+ +E +L A+ + +I+VSPAVV+G DI+ ++ I + ++ Sbjct: 66 FSLQVEKTLDAYG-EGDTIIIVSPAVVRGTTDITDDVYASILENIESK 112 >UniRef50_C9NPU4 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU4_9VIBR Length = 114 Score = 58.6 bits (140), Expect = 5e-08, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 26 LAMVLLNAAVSYGIVRLNAP-VTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTAL 84 LA V+ V+ +P N+ + + + L+ Q F+T L Sbjct: 9 LAFVVQGLGVAMFWRVSESPCAVTTLNLGPIYAEYQRTLVDESLTVDQQHQRWTHFHTIL 68 Query: 85 EASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 + +Q+ HH +IL AV+ GA DI+ +Q+ + + + E Sbjct: 69 NRVVGDYQRDHHTLILRPSAVMAGAEDITLPVQRAVEQALDTE 111 >UniRef50_Q4LC35 TrbI protein n=2 Tax=Sodalis glossinidius RepID=Q4LC35_SODGL Length = 98 Score = 50.5 bits (119), Expect = 2e-05, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%) Query: 13 ERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQ 72 R +V +L +++ + V F+MKQT+ AF+ SA+++ L+ A+ Sbjct: 9 PERGVVGLSVRRLALWAVLLSSLLTLWLVPRQLGVVRFDMKQTMAAFYLSAAKQSLTPAR 68 Query: 73 SKALSARFNTALEASLQAWQQKHH 96 S+ALSARFN AL+ + Q Sbjct: 69 SEALSARFNEALQRDIARRMQASR 92 >UniRef50_Q3IUW2 Sex-pilus assembly protein n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW2_RHOS4 Length = 119 Score = 48.2 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 6/99 (6%) Query: 32 NAAVSYGIVRLNAPV-----TVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALEA 86 + A++ IV + P V + + V +F A K++ + +A + + LEA Sbjct: 16 SVALTLAIVLASQPRGLPTGIVTLDATEAVLSFI-RAGGKEMPDTDYEAAAKIYQADLEA 74 Query: 87 SLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMR 125 ++ + +H +++ S V+ GAPDI++E+ Q R R Sbjct: 75 AIADFAAEHSVIVVNSATVLAGAPDITQEVSQKALARWR 113 >UniRef50_O85940 Conjugal transfer protein n=5 Tax=Sphingomonadaceae RepID=O85940_SPHAR Length = 368 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 37/83 (44%), Gaps = 2/83 (2%) Query: 44 APVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSP 103 P + V + + ++ Q + F + ++ +L+ ++LV Sbjct: 69 TPAIAKVQLSGIVGEYVQAQARSATPPEQVTTETRAFMSEIQRNLERRGAAGQ-IVLVGE 127 Query: 104 AVVQG-APDISREIQQDIARRMR 125 AVV G PDI+ ++++++ R+R Sbjct: 128 AVVAGNVPDITADVRREVYARVR 150 >UniRef50_Q0F364 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F364_9PROT Length = 99 Score = 47.4 bits (111), Expect = 1e-04, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 18 WWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALS 77 W V ++ L + +L P V ++ D ++ +L + Sbjct: 3 RWTIVLTVACVLALGMSGVLWWHQLQQPRIVTVDLTGLADE-----ARSRLHDTSR---I 54 Query: 78 ARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIA 121 F L+ L + H VIL AV GAPDI+ +++ + Sbjct: 55 GTFARKLQGELVRISRDEHLVILPRQAVAAGAPDITERLRRRLL 98 >UniRef50_D1RMN7 Type-F conjugative transfer system protein TrbI n=2 Tax=Legionella RepID=D1RMN7_LEGLO Length = 111 Score = 46.6 bits (109), Expect = 2e-04, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 44/102 (43%), Gaps = 1/102 (0%) Query: 25 CLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTAL 84 ++ VL+ + + P +M++ ++ SQ LSE + K + ++++ L Sbjct: 10 LISAVLILPGMVLWGLHKPTP-IAVVDMQRLLNQPAVLLSQSNLSEQEQKKVLKQYSSLL 68 Query: 85 EASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRA 126 L + HH ++ + + G D++ E+ ++ A Sbjct: 69 PQVLSQYGVSHHVTLITATVISSGRFDVTDEVIAATLEQLGA 110 >UniRef50_A5PDJ0 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDJ0_9SPHN Length = 108 Score = 45.9 bits (107), Expect = 4e-04, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 4/104 (3%) Query: 25 CLAMVLLNAAVSYGIVRLNAPV--TVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNT 82 LA+V+ ++ L+ P V + +T+ F D+ ++ Q S+A F Sbjct: 1 MLALVVALLWAAWVSRELSEPRQQIVTVRLAETIAGFVDAEARGQQDPEASQARVLAFLQ 60 Query: 83 ALEASLQAWQQKHHAVILVSPAVVQG-APDISREIQQDIARRMR 125 A E ++ V+LV AV+ G APD + E++ IAR++ Sbjct: 61 ASERAVAEMGTDGR-VVLVGEAVLAGDAPDATDELRARIARQLE 103 >UniRef50_Q2G6C0 Putative uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G6C0_NOVAD Length = 135 Score = 43.2 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 2/107 (1%) Query: 23 PGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNT 82 G + VL + ++ L V + + + F ++ ++ +++ + Sbjct: 26 AGMVGQVLWGVWATDKLLTLEKREVVTVQLSRILGDFIEAEARAGRPPEETRLRVQAYLK 85 Query: 83 ALEASLQAWQQKHHAVILVSPAVVQGA-PDISREIQQDIARRMRAEP 128 A+EAS+Q ++ V LV+ AVV G+ PD++ ++ D+ RRM A P Sbjct: 86 AVEASVQTLGREGRTV-LVAEAVVAGSTPDLTGSVRADVMRRMGALP 131 >UniRef50_Q8A7A6 SusC homolog n=7 Tax=Bacteroides RepID=Q8A7A6_BACTN Length = 1150 Score = 42.4 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 48/126 (38%), Gaps = 13/126 (10%) Query: 16 SHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQ--- 72 + C + + N P+ F + + F + +Q +L Q Sbjct: 17 KFYILLFALCFYNIAYGQNQPITVSMKNQPLLKVFEIIEDQTEFSIAYNQTKLDVKQKVS 76 Query: 73 ----SKALSARFNTALEASLQAWQQKHHAVILVS-PAVVQGAPDISREIQQDI-----AR 122 +A+S+ N+ L+ + ++Q+ +I++ PA + AP+ + QQ I Sbjct: 77 ANFVREAVSSVLNSVLKGTGFTYRQEGKHIIIIPVPAKAEAAPNNTTSTQQSIKIRGTVT 136 Query: 123 RMRAEP 128 + EP Sbjct: 137 DAQGEP 142 >UniRef50_Q2NDH3 Putative uncharacterized protein n=4 Tax=Erythrobacter RepID=Q2NDH3_ERYLH Length = 126 Score = 42.0 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 2/97 (2%) Query: 32 NAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAW 91 A ++ + V + +T+ F + A++ A +A S + A EA++ Sbjct: 28 GAWLTQQVTSSPKQRIVTVRLAETIGTFVEEAARADADPAVVQAASLAYLKAAEAAVADM 87 Query: 92 QQKHHAVILVSPAVVQGA-PDISREIQQDIARRMRAE 127 + V+LV+ AV+ GA D + E+++ IA + E Sbjct: 88 GRDGR-VVLVAEAVLAGAAEDATPELERRIADELAGE 123 >UniRef50_Q1N8Z8 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z8_9SPHN Length = 151 Score = 41.6 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 44/108 (40%), Gaps = 3/108 (2%) Query: 19 WWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSA 78 W + + + +V ++ V + ++ Q A + Sbjct: 21 WTLSIAVVLLWAVWVSVKVLTPTNFNDRFAKVQLQGLVSEYVMKQARTATPPEQITAETQ 80 Query: 79 RFNTALEASLQAWQQKHHAVILVSPAVVQGA--PDISREIQQDIARRM 124 +F A++ S++ +ILV+ A+V + PDI+ +++Q + +++ Sbjct: 81 KFMQAVDQSVRE-ASAGGRIILVNEALVGSSEVPDITAQVRQAVYQKV 127 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D0R7E9 Conjugative transfer protein n=5 Tax=Salmonella ... 152 4e-36 UniRef50_P18006 Protein trbI n=35 Tax=root RepID=TRBI_ECOLI 147 8e-35 UniRef50_B6ICF7 TrbI protein n=1 Tax=Escherichia coli SE11 RepID... 121 9e-27 UniRef50_B2VB12 Conjugative transfer protein n=1 Tax=Erwinia tas... 118 5e-26 UniRef50_A4WGS8 Putative uncharacterized protein n=1 Tax=Enterob... 115 5e-25 UniRef50_A4TSZ0 Conjugative transfer protein n=6 Tax=Enterobacte... 115 6e-25 UniRef50_C8QDS0 Type-F conjugative transfer system protein TrbI ... 112 4e-24 UniRef50_A4SUD4 Conjugative transfer protein TrbI n=1 Tax=Aeromo... 111 8e-24 UniRef50_A5KZG0 Conjugative transfer n=1 Tax=Vibrionales bacteri... 100 2e-20 UniRef50_A8QYQ4 TrbI protein n=2 Tax=Legionellaceae RepID=A8QYQ4... 97 2e-19 UniRef50_Q8D697 Putative uncharacterized protein n=1 Tax=Vibrio ... 96 4e-19 UniRef50_C9NPU4 Putative uncharacterized protein n=1 Tax=Vibrio ... 95 7e-19 UniRef50_B6ESY0 Conjugative transfer protein TrbI (Trbi) n=1 Tax... 94 9e-19 UniRef50_Q1MY38 Putative uncharacterized protein n=1 Tax=Bermane... 93 4e-18 UniRef50_Q0F364 Putative uncharacterized protein n=1 Tax=Maripro... 85 7e-16 UniRef50_B8EG16 Conjugal transfer protein TrbI n=6 Tax=Shewanell... 83 3e-15 UniRef50_D1RMN7 Type-F conjugative transfer system protein TrbI ... 81 9e-15 UniRef50_O85940 Conjugal transfer protein n=5 Tax=Sphingomonadac... 77 1e-13 UniRef50_D2TZZ6 Conjugal transfer protein TrbI n=1 Tax=Arsenopho... 75 6e-13 UniRef50_Q3IUW2 Sex-pilus assembly protein n=1 Tax=Rhodobacter s... 72 7e-12 UniRef50_A5PDJ0 Putative uncharacterized protein n=1 Tax=Erythro... 70 2e-11 UniRef50_Q4LC35 TrbI protein n=2 Tax=Sodalis glossinidius RepID=... 59 3e-08 Sequences not found previously or not previously below threshold: UniRef50_Q2G6C0 Putative uncharacterized protein n=1 Tax=Novosph... 58 1e-07 UniRef50_Q1N8Z8 Putative uncharacterized protein n=1 Tax=Sphingo... 57 2e-07 UniRef50_Q2NDH3 Putative uncharacterized protein n=4 Tax=Erythro... 55 7e-07 UniRef50_A3VN19 Putative uncharacterized protein n=1 Tax=Parvula... 55 9e-07 UniRef50_A5P8G5 Putative uncharacterized protein (Fragment) n=1 ... 50 3e-05 UniRef50_A0B4N7 Putative uncharacterized protein n=3 Tax=Burkhol... 49 5e-05 UniRef50_A5VGR5 Putative uncharacterized protein n=1 Tax=Sphingo... 46 3e-04 >UniRef50_D0R7E9 Conjugative transfer protein n=5 Tax=Salmonella enterica RepID=D0R7E9_SALTD Length = 128 Score = 152 bits (383), Expect = 4e-36, Method: Composition-based stats. Identities = 102/128 (79%), Positives = 112/128 (87%) Query: 1 MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF 60 MS+ QK D T R+ W +PGCL MV+LNAA+SYGIVRLN PVTVAFNMKQTVDAFF Sbjct: 1 MSTKQKQTDGTGARKRDGLWMIPGCLGMVVLNAAISYGIVRLNTPVTVAFNMKQTVDAFF 60 Query: 61 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI 120 DSA QK+L+EAQSKALS RFN ALEASLQAWQ++HHAVILVSPAVVQGAPDI+REIQQDI Sbjct: 61 DSAGQKKLTEAQSKALSGRFNAALEASLQAWQREHHAVILVSPAVVQGAPDITREIQQDI 120 Query: 121 ARRMRAEP 128 ARRMRAEP Sbjct: 121 ARRMRAEP 128 >UniRef50_P18006 Protein trbI n=35 Tax=root RepID=TRBI_ECOLI Length = 128 Score = 147 bits (372), Expect = 8e-35, Method: Composition-based stats. Identities = 128/128 (100%), Positives = 128/128 (100%) Query: 1 MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF 60 MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF Sbjct: 1 MSSTQKPADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF 60 Query: 61 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI 120 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI Sbjct: 61 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI 120 Query: 121 ARRMRAEP 128 ARRMRAEP Sbjct: 121 ARRMRAEP 128 >UniRef50_B6ICF7 TrbI protein n=1 Tax=Escherichia coli SE11 RepID=B6ICF7_ECOSE Length = 138 Score = 121 bits (302), Expect = 9e-27, Method: Composition-based stats. Identities = 57/124 (45%), Positives = 80/124 (64%), Gaps = 1/124 (0%) Query: 2 SSTQKPADVTAERRSHWWWTVPGCLA-MVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFF 60 + T + + RR + +V G +A +++LNA VS + PV V+F+M TV++F Sbjct: 11 AGTPEKSPAKCSRRRRYLKSVAGVVAGIIVLNAGVSLLLTEWRQPVMVSFDMAGTVNSFM 70 Query: 61 DSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDI 120 A+ + L EAQ KAL+ARFN AL SL A+Q+ H AVI+V+PAVV GA DI+ EIQQ + Sbjct: 71 SQAAAQALDEAQIKALTARFNRALSDSLTAYQRDHRAVIIVAPAVVGGAEDITAEIQQSV 130 Query: 121 ARRM 124 A RM Sbjct: 131 AARM 134 >UniRef50_B2VB12 Conjugative transfer protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB12_ERWT9 Length = 137 Score = 118 bits (296), Expect = 5e-26, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 66/115 (57%), Gaps = 3/115 (2%) Query: 15 RSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQ--KQLSEAQ 72 + +W + + +++ + IVR+N P V F++K T D F + K+ + Sbjct: 23 KGYWILILSAVFFIFIISFVTATVIVRVNQPKIVTFDLKSTTDDFVQKTAMLGKKATPKD 82 Query: 73 SKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 + L+A F +++ +L ++++ + +++V PAV++GA DI+ E++++I R +R E Sbjct: 83 VEELTAIFKQSMQDTLDMYERQGY-IVMVKPAVMKGAKDITDEVRENIYRNIRGE 136 >UniRef50_A4WGS8 Putative uncharacterized protein n=1 Tax=Enterobacter sp. 638 RepID=A4WGS8_ENT38 Length = 138 Score = 115 bits (287), Expect = 5e-25, Method: Composition-based stats. Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 9/132 (6%) Query: 3 STQKPADVTAERRS---------HWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMK 53 + +KP D + R W + A +L V+Y + P V F+MK Sbjct: 4 NNEKPYDAESVRDGVTIATFFASRWVKGLLLGGAGLLAMTGVAYVTAKAVTPDVVVFDMK 63 Query: 54 QTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDIS 113 TVD F ++Q L E ++K L++RFNTAL SL AWQ H+A+ILV PAV+ PDI+ Sbjct: 64 GTVDLFMQQSAQLNLDEGKAKVLTSRFNTALSDSLNAWQTSHNAIILVKPAVMSPQPDIT 123 Query: 114 REIQQDIARRMR 125 +I+ DI+RR++ Sbjct: 124 ADIRSDISRRIQ 135 >UniRef50_A4TSZ0 Conjugative transfer protein n=6 Tax=Enterobacteriaceae RepID=A4TSZ0_YERPP Length = 115 Score = 115 bits (287), Expect = 6e-25, Method: Composition-based stats. Identities = 65/111 (58%), Positives = 82/111 (73%) Query: 15 RSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSK 74 + H + +A VS+ + +LN PV VAFNMK TVDAFFDSA ++ L EAQ+K Sbjct: 2 KKHVLINAALIAGTLAASAGVSWLVCQLNRPVVVAFNMKSTVDAFFDSAGRRSLDEAQTK 61 Query: 75 ALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMR 125 ALS RFN +LEASL+ WQ +H A+ILV+PAVVQGAPDI+REIQ D+ARRM+ Sbjct: 62 ALSDRFNASLEASLRDWQIRHRALILVAPAVVQGAPDITREIQTDVARRMK 112 >UniRef50_C8QDS0 Type-F conjugative transfer system protein TrbI n=2 Tax=Pantoea sp. At-9b RepID=C8QDS0_9ENTR Length = 148 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 48/117 (41%), Positives = 62/117 (52%) Query: 12 AERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEA 71 + R ++ L+A +S + R P V F+MK T+D F +Q L+ Sbjct: 32 SPVRGRVIRIAALATVVMALSAGISALVARTLQPAYVVFDMKGTLDTFRQQTAQTPLTIE 91 Query: 72 QSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAEP 128 L+ARF TAL ASL WQ H VILV AVV G PDI+ EIQ DIAR+M+ P Sbjct: 92 AIATLTARFGTALNASLTGWQAAHGGVILVKGAVVSGVPDITPEIQADIARQMQGTP 148 >UniRef50_A4SUD4 Conjugative transfer protein TrbI n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUD4_AERS4 Length = 145 Score = 111 bits (277), Expect = 8e-24, Method: Composition-based stats. Identities = 57/118 (48%), Positives = 77/118 (65%), Gaps = 1/118 (0%) Query: 10 VTAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLS 69 +A RR+ W + + LN A + + P VAF+MK T+D F + ++ + L+ Sbjct: 16 TSAPRRTGRGWML-ALAVLTALNLAATGWLALHRTPTPVAFDMKGTIDQFMEQSASQSLT 74 Query: 70 EAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 EAQSK L ARF AL+ASL WQQ+H A+ILVSP+VV+GA DI+R IQ DIA RMRA+ Sbjct: 75 EAQSKQLVARFTQALDASLSVWQQEHRALILVSPSVVRGADDITRTIQHDIATRMRAQ 132 >UniRef50_A5KZG0 Conjugative transfer n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZG0_9GAMM Length = 115 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 3/109 (2%) Query: 20 WTVPGCLAMVLLNAAVSYGIVRLNA-PVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSA 78 + V LA+ L+ + ++LN P V F+++QT+ + D + L + + A A Sbjct: 8 YLVYALLAIALMMF--TLIAIKLNTAPQIVVFDIEQTLSQYQDQLIEANLDDQEHNAQLA 65 Query: 79 RFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 F+T L L+ + Q HH VILV A++ GAPD + EIQ + ++ E Sbjct: 66 TFDTDLRRLLKEYAQAHHLVILVPGALISGAPDRTTEIQHYVIEALKKE 114 >UniRef50_A8QYQ4 TrbI protein n=2 Tax=Legionellaceae RepID=A8QYQ4_9GAMM Length = 111 Score = 96.7 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 1/110 (0%) Query: 18 WWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALS 77 + + + + V+ P V FN ++ + F ++ + +E+Q + + Sbjct: 2 RLIPITASFVLAIFGFFILSYGVKPKEP-IVIFNKEEVLSQFIRQLAEIKATESQVEQST 60 Query: 78 ARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 RFN L L Q+ +IL V G DI+ E++ ++ MR + Sbjct: 61 RRFNALLNKVLVELAQQKKVIILRKNDVFAGGIDITDEVRIRLSHAMRNK 110 >UniRef50_Q8D697 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus RepID=Q8D697_VIBVU Length = 114 Score = 95.6 bits (236), Expect = 4e-19, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 57/109 (52%) Query: 19 WWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSA 78 + +++ L+ ++ + +P V+ ++K T++A+ + +K++S + Sbjct: 5 LSMIAMMVSISALSTLTAHTFLSQPSPTFVSVDVKSTLNAYHQALIKKEMSLEEQTKRLT 64 Query: 79 RFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 +F + ++A+ +H+ + LVS AVV GA D++ +IQ+ I + + Sbjct: 65 QFAGIMHEEIEAYNAQHNTIALVSAAVVGGAVDVTPQIQRAIIEHYQDK 113 >UniRef50_C9NPU4 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU4_9VIBR Length = 114 Score = 94.8 bits (234), Expect = 7e-19, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 26 LAMVLLNAAVSYGIVRLNAP-VTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTAL 84 LA V+ V+ +P N+ + + + L+ Q F+T L Sbjct: 9 LAFVVQGLGVAMFWRVSESPCAVTTLNLGPIYAEYQRTLVDESLTVDQQHQRWTHFHTIL 68 Query: 85 EASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 + +Q+ HH +IL AV+ GA DI+ +Q+ + + + E Sbjct: 69 NRVVGDYQRDHHTLILRPSAVMAGAEDITLPVQRAVEQALDTE 111 >UniRef50_B6ESY0 Conjugative transfer protein TrbI (Trbi) n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6ESY0_ALISL Length = 115 Score = 94.4 bits (233), Expect = 9e-19, Method: Composition-based stats. Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 5/107 (4%) Query: 19 WWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSA 78 W + CL V L+ +V I R P F++K+T+ F +K +++A+ +A Sbjct: 9 WLLIGACL--VSLSVSVLTLITR---PSVAVFDVKRTLTQFQHQLIEKGVTQAEHQAYLT 63 Query: 79 RFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMR 125 F ALE + + Q+H+ +IL +PAVV GA DI+ +QQ I + + Sbjct: 64 HFAQALERATAQYSQEHNVLILTTPAVVAGADDITTVLQQHIIEQYQ 110 >UniRef50_Q1MY38 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1MY38_9GAMM Length = 112 Score = 92.5 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 55/108 (50%), Gaps = 2/108 (1%) Query: 21 TVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQK-QLSEAQSKALSAR 79 V VL++ A S+ +V+L P + ++ + +D K ++++ + S Sbjct: 6 LVFTLGISVLVSLASSFLVVKLMVPEIKSVSLDKLLDNHIAQVKTKYEMTDEEVNTYSEA 65 Query: 80 FNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 F+ +E +L A+ + +I+VSPAVV+G DI+ ++ I + ++ Sbjct: 66 FSLQVEKTLDAYG-EGDTIIIVSPAVVRGTTDITDDVYASILENIESK 112 >UniRef50_Q0F364 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F364_9PROT Length = 99 Score = 85.2 bits (209), Expect = 7e-16, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 8/104 (7%) Query: 18 WWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALS 77 W V ++ L + +L P V ++ D ++ +L + Sbjct: 3 RWTIVLTVACVLALGMSGVLWWHQLQQPRIVTVDLTGLADE-----ARSRLHDTS---RI 54 Query: 78 ARFNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIA 121 F L+ L + H VIL AV GAPDI+ +++ + Sbjct: 55 GTFARKLQGELVRISRDEHLVILPRQAVAAGAPDITERLRRRLL 98 >UniRef50_B8EG16 Conjugal transfer protein TrbI n=6 Tax=Shewanella baltica RepID=B8EG16_SHEB2 Length = 123 Score = 82.9 bits (203), Expect = 3e-15, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 2/108 (1%) Query: 20 WTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSAR 79 + L +V L ++ + R P V +++ +TV +F S Q +LS+ Q + R Sbjct: 4 TIIQSILWLVTLGVMITLWVTR--EPRVVEYDINETVASFHQSIGQSELSDEQREKEITR 61 Query: 80 FNTALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRAE 127 F L+ +Q + +H V+LVSPAVV GA ++++EIQQ + + ++A+ Sbjct: 62 FTQTLDDVVQQYALDNHVVVLVSPAVVSGAVNVTQEIQQSLLQTLQAQ 109 >UniRef50_D1RMN7 Type-F conjugative transfer system protein TrbI n=2 Tax=Legionella RepID=D1RMN7_LEGLO Length = 111 Score = 81.3 bits (199), Expect = 9e-15, Method: Composition-based stats. Identities = 18/105 (17%), Positives = 44/105 (41%), Gaps = 1/105 (0%) Query: 22 VPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFN 81 ++ VL+ + + P +M++ ++ SQ LSE + K + +++ Sbjct: 7 AQLLISAVLILPGMVLWGLHKPTP-IAVVDMQRLLNQPAVLLSQSNLSEQEQKKVLKQYS 65 Query: 82 TALEASLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMRA 126 + L L + HH ++ + + G D++ E+ ++ A Sbjct: 66 SLLPQVLSQYGVSHHVTLITATVISSGRFDVTDEVIAATLEQLGA 110 >UniRef50_O85940 Conjugal transfer protein n=5 Tax=Sphingomonadaceae RepID=O85940_SPHAR Length = 368 Score = 77.5 bits (189), Expect = 1e-13, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 48/124 (38%), Gaps = 7/124 (5%) Query: 8 ADVTAERRSHWWWTVPGCLAMVLLNAAVSYGIVR-----LNAPVTVAFNMKQTVDAFFDS 62 A + +R+ +A ++ + + P + V + + Sbjct: 28 APASPPQRARLGAAPVALVAALVAAGLWGAWVTKSVLGGPKTPAIAKVQLSGIVGEYVQA 87 Query: 63 ASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQG-APDISREIQQDIA 121 ++ Q + F + ++ +L+ ++LV AVV G PDI+ ++++++ Sbjct: 88 QARSATPPEQVTTETRAFMSEIQRNLERRGAAGQ-IVLVGEAVVAGNVPDITADVRREVY 146 Query: 122 RRMR 125 R+R Sbjct: 147 ARVR 150 >UniRef50_D2TZZ6 Conjugal transfer protein TrbI n=1 Tax=Arsenophonus nasoniae RepID=D2TZZ6_9ENTR Length = 76 Score = 75.2 bits (183), Expect = 6e-13, Method: Composition-based stats. Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 52 MKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQGAPD 111 MK+T D F S+ LS+ + L R+N L+ L+ Q VILV+ AV+ GA D Sbjct: 1 MKKTTDRFLLQVSKLDLSDEKKDQLIERYNNTLKRVLEKNIQ-GKTVILVNSAVMAGAVD 59 Query: 112 ISREIQQDIARRMR 125 + +IQ+ IA M+ Sbjct: 60 KTADIQKQIAEAMK 73 >UniRef50_Q3IUW2 Sex-pilus assembly protein n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW2_RHOS4 Length = 119 Score = 71.7 bits (174), Expect = 7e-12, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 6/99 (6%) Query: 32 NAAVSYGIVRLNAPV-----TVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALEA 86 + A++ IV + P V + + V +F A K++ + +A + + LEA Sbjct: 16 SVALTLAIVLASQPRGLPTGIVTLDATEAVLSFIR-AGGKEMPDTDYEAAAKIYQADLEA 74 Query: 87 SLQAWQQKHHAVILVSPAVVQGAPDISREIQQDIARRMR 125 ++ + +H +++ S V+ GAPDI++E+ Q R R Sbjct: 75 AIADFAAEHSVIVVNSATVLAGAPDITQEVSQKALARWR 113 >UniRef50_A5PDJ0 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDJ0_9SPHN Length = 108 Score = 70.2 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 4/104 (3%) Query: 25 CLAMVLLNAAVSYGIVRLNAPV--TVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNT 82 LA+V+ ++ L+ P V + +T+ F D+ ++ Q S+A F Sbjct: 1 MLALVVALLWAAWVSRELSEPRQQIVTVRLAETIAGFVDAEARGQQDPEASQARVLAFLQ 60 Query: 83 ALEASLQAWQQKHHAVILVSPAVVQG-APDISREIQQDIARRMR 125 A E ++ V+LV AV+ G APD + E++ IAR++ Sbjct: 61 ASERAVAEMGTDGR-VVLVGEAVLAGDAPDATDELRARIARQLE 103 >UniRef50_Q4LC35 TrbI protein n=2 Tax=Sodalis glossinidius RepID=Q4LC35_SODGL Length = 98 Score = 59.4 bits (142), Expect = 3e-08, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 43/84 (51%) Query: 13 ERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQ 72 R +V +L +++ + V F+MKQT+ AF+ SA+++ L+ A+ Sbjct: 9 PERGVVGLSVRRLALWAVLLSSLLTLWLVPRQLGVVRFDMKQTMAAFYLSAAKQSLTPAR 68 Query: 73 SKALSARFNTALEASLQAWQQKHH 96 S+ALSARFN AL+ + Q Sbjct: 69 SEALSARFNEALQRDIARRMQASR 92 >UniRef50_Q2G6C0 Putative uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G6C0_NOVAD Length = 135 Score = 57.8 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 2/107 (1%) Query: 23 PGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNT 82 G + VL + ++ L V + + + F ++ ++ +++ + Sbjct: 26 AGMVGQVLWGVWATDKLLTLEKREVVTVQLSRILGDFIEAEARAGRPPEETRLRVQAYLK 85 Query: 83 ALEASLQAWQQKHHAVILVSPAVVQG-APDISREIQQDIARRMRAEP 128 A+EAS+Q ++ V LV+ AVV G PD++ ++ D+ RRM A P Sbjct: 86 AVEASVQTLGREGRTV-LVAEAVVAGSTPDLTGSVRADVMRRMGALP 131 >UniRef50_Q1N8Z8 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z8_9SPHN Length = 151 Score = 57.1 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 47/112 (41%), Gaps = 8/112 (7%) Query: 20 WTVPGCLAMVLLNAAVSYGIVRLNAP-----VTVAFNMKQTVDAFFDSASQKQLSEAQSK 74 L++ ++ + V++ P ++ V + ++ Q Sbjct: 17 TLAAWTLSIAVVLLWAVWVSVKVLTPTNFNDRFAKVQLQGLVSEYVMKQARTATPPEQIT 76 Query: 75 ALSARFNTALEASLQAWQQKHHAVILVSPAVVQG--APDISREIQQDIARRM 124 A + +F A++ S++ +ILV+ A+V PDI+ +++Q + +++ Sbjct: 77 AETQKFMQAVDQSVREASAGGR-IILVNEALVGSSEVPDITAQVRQAVYQKV 127 >UniRef50_Q2NDH3 Putative uncharacterized protein n=4 Tax=Erythrobacter RepID=Q2NDH3_ERYLH Length = 126 Score = 55.1 bits (131), Expect = 7e-07, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 2/97 (2%) Query: 32 NAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAW 91 A ++ + V + +T+ F + A++ A +A S + A EA++ Sbjct: 28 GAWLTQQVTSSPKQRIVTVRLAETIGTFVEEAARADADPAVVQAASLAYLKAAEAAVADM 87 Query: 92 QQKHHAVILVSPAVVQGA-PDISREIQQDIARRMRAE 127 + V+LV+ AV+ GA D + E+++ IA + E Sbjct: 88 GRDGR-VVLVAEAVLAGAAEDATPELERRIADELAGE 123 >UniRef50_A3VN19 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN19_9PROT Length = 174 Score = 54.8 bits (130), Expect = 9e-07, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Query: 11 TAERRSHWWWTVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQKQLSE 70 ++ + +A+ L AA++ + + + PV ++ +++ V S +++ Sbjct: 13 ETDKTTKRLVLAGMAVAVSLSTAALTLTLRQPDPPVFISVSLRSLVQEHMLSTLGPEVTP 72 Query: 71 AQSKALSARFNTALEASLQAWQQKHHAVILVSPAVV-QGAPDISREIQ 117 +++ +A F+ AL+ ++ + ++L S AV+ PD + E++ Sbjct: 73 FEAETRTAEFSRALDVAIGELAAEEGVIVLASEAVLGAQVPDFTEEVR 120 >UniRef50_A5P8G5 Putative uncharacterized protein (Fragment) n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P8G5_9SPHN Length = 79 Score = 49.7 bits (117), Expect = 3e-05, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%) Query: 58 AFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVILVSPAVVQG-APDISREI 116 F D+ ++ Q + A ARF A E ++ V+LV AV+ G APD + E+ Sbjct: 8 RFVDAEARGQQDPKPASAR-ARFLQASERAVAEMGTDGR-VVLVGEAVLAGDAPDATDEL 65 Query: 117 QQDIARRMR 125 + IAR++ Sbjct: 66 RARIARQLE 74 >UniRef50_A0B4N7 Putative uncharacterized protein n=3 Tax=Burkholderia RepID=A0B4N7_BURCH Length = 124 Score = 48.6 bits (114), Expect = 5e-05, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 46/113 (40%), Gaps = 11/113 (9%) Query: 21 TVPGCLAMVLLNAAVSYGIVRLNAPVTVAFNMKQTVDAFFDSASQK-------QLSEAQS 73 + ++VL + V + R VA ++++ + ++ + +++ Sbjct: 12 LISIGASLVLGSPLVYFWTQREKVAPVVAVDVQKLISDEQETLLKTFNNGDPVHMTDDAK 71 Query: 74 KALSAR---FNTALEASLQAWQQKHHAVILVSPAVVQG-APDISREIQQDIAR 122 + + L A+L + V++ AV+ G APD++ I + IA+ Sbjct: 72 NKATQHAGDYAKRLSAALDQLGAQCGCVVINKAAVLAGDAPDLTDLIAKRIAK 124 >UniRef50_A5VGR5 Putative uncharacterized protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VGR5_SPHWW Length = 215 Score = 45.9 bits (107), Expect = 3e-04, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 2/84 (2%) Query: 40 VRLNAPVTVAFNMKQTVDAFFDSASQKQLSEAQSKALSARFNTALEASLQAWQQKHHAVI 99 V V+ + + V + ++ + KA F +L+ L H VI Sbjct: 56 VSARTDHIVSVKLSELVGEYVEAQRYSASPPERVKAEMQAFMASLDKELARRSA-HGDVI 114 Query: 100 LVSPAVVQ-GAPDISREIQQDIAR 122 LV AV+ DI+ +++ + Sbjct: 115 LVGEAVLSKNVDDITETVKKAVYA 138 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.308 0.128 0.301 Lambda K H 0.267 0.0391 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 531,353,462 Number of Sequences: 3077464 Number of extensions: 13972057 Number of successful extensions: 62300 Number of sequences better than 1.0e-01: 30 Number of HSP's better than 0.1 without gapping: 65 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 62211 Number of HSP's gapped (non-prelim): 81 length of query: 128 length of database: 1,040,396,356 effective HSP length: 94 effective length of query: 34 effective length of database: 751,114,740 effective search space: 25537901160 effective search space used: 25537901160 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 87 (38.2 bits)