17/01/2012 15:11:43 : INFO  : Run start: Tue Jan 17 15:11:43 GMT 2012
17/01/2012 15:11:43 : INFO  : Initialised job
17/01/2012 15:11:43 : INFO  : Renaming log file 'phyre2_20120117_151143.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/94ed0c89ef5a7a40/phyre_20120117_151143.log'
17/01/2012 15:11:43 : INFO  : Initialised job:
Sequence
>batch____
MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQVYKTLLVAVNGDMKHLA
VAVTPVAGQLDLKKVAKALGAKKVEMADPMVAQRSTGYLVGGISPLGQKKRLPTIIDAPA
QEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD

17/01/2012 15:11:43 : INFO  : Checked sequence
17/01/2012 15:11:43 : INFO  : Finding homologues with PSI-BLAST
17/01/2012 15:11:43 : INFO  : PSI-BLAST 3 iterations
17/01/2012 15:12:53 : INFO  : PSI-BLAST 5 iterations
17/01/2012 15:14:08 : INFO  : Finished PSI-BLAST
17/01/2012 15:14:08 : INFO  : Running Buildali to generate a3m file
17/01/2012 15:17:50 : INFO  : Converting to HMM
17/01/2012 15:17:51 : INFO  : Calibrating HMM
17/01/2012 15:17:56 : INFO  : Searching HMM database
17/01/2012 15:21:20 : INFO  : Finished buildali
17/01/2012 15:21:20 : INFO  : Predicting secondary structure
17/01/2012 15:21:21 : INFO  : Predicted secondary structure (PSI-Pred)
17/01/2012 15:21:21 : INFO  : Predicting Disordered regions
17/01/2012 15:21:21 : INFO  : Predicted Disorder (Disopred)
17/01/2012 15:21:21 : INFO  : Running memsat_svm check
17/01/2012 15:22:05 : INFO  : Globular protein
17/01/2012 15:22:05 : INFO  : Predicted Transmembrane (memsat_svm) ID '94ed0c89ef5a7a40'
17/01/2012 15:22:05 : INFO  : Initialising fold library search
17/01/2012 15:22:05 : INFO  : Initialised search input
17/01/2012 15:22:05 : INFO  : Building Ensemble models
17/01/2012 15:22:05 : INFO  : Building hh.c2dxaA_.model.1.pdb
17/01/2012 15:22:06 : INFO  : Building c2dxaA_.1.pdb
17/01/2012 15:22:06 : INFO  : Building d1dbxa_.2.pdb
17/01/2012 15:22:07 : INFO  : Building d1vjfa_.3.pdb
17/01/2012 15:22:09 : INFO  : Building d1wdva_.4.pdb
17/01/2012 15:22:09 : INFO  : Building d1vkia_.5.pdb
17/01/2012 15:22:10 : INFO  : Building c2cx5B_.6.pdb
17/01/2012 15:22:10 : INFO  : Building c3op6B_.7.pdb
17/01/2012 15:22:11 : INFO  : Building c3memA_.8.pdb
17/01/2012 15:22:11 : INFO  : Building c2j3mA_.9.pdb
17/01/2012 15:22:11 : INFO  : Building d1j9ba_.10.pdb
17/01/2012 15:22:12 : INFO  : Building c3gkxB_.11.pdb
17/01/2012 15:22:12 : INFO  : Building d1z3ea1.12.pdb
17/01/2012 15:22:12 : INFO  : Building c3fz4A_.13.pdb
17/01/2012 15:22:12 : INFO  : Building c3l78A_.14.pdb
17/01/2012 15:22:13 : INFO  : Building c3rdwB_.15.pdb
17/01/2012 15:22:13 : INFO  : Building c2kokA_.16.pdb
17/01/2012 15:22:13 : INFO  : Building c3f0iA_.17.pdb
17/01/2012 15:22:14 : INFO  : Building d1rw1a_.18.pdb
17/01/2012 15:22:14 : INFO  : Building c3lgcA_.19.pdb
17/01/2012 15:22:14 : INFO  : Building d1fova_.20.pdb
17/01/2012 15:22:15 : INFO  : Finished HH model building
17/01/2012 15:22:15 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
17/01/2012 15:22:18 : INFO  : html domain output complete ID '94ed0c89ef5a7a40'
17/01/2012 15:33:13 : INFO  : Run end  : Tue Jan 17 15:33:13 GMT 2012
