112 c2ja1A_ Probab=97.65   E-value=0.001  Score=42.17  Aligned_columns=125  Identities=17%

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf             799789998699998899999985010016840123565200--001122222122335555465432788765310121
Q batch____        24 RAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLEA--WSATKLALHRAYLSQQQTPPFATPVWHYLTLHQHDK  101 (249)
Q Consensus        24 ~~Gei~givG~nGsGKStLl~~l~Gl~~~~G~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~  101 (249)
                      ++|.++-|.||.||||||+|..+.......+...+.-.+...  +.........+.............+.+.        
T Consensus         8 ~~G~i~li~Gp~gSGKTt~L~~~l~~~~~~~~~v~~i~~~~~~r~~~~~i~~~~g~~~~~~~~~~~~~l~~~--------   79 (193)
T c2ja1A_           8 QNGWIEVICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSASKDIFEH--------   79 (193)
T ss_dssp             CCCEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEEETTCCSSCSSEEECTTSCEEECEEESSGGGGGGG--------
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCEEHHCCCCCCCCCCCCHHHHHHH--------
T ss_conf             797399997697897899999999973327976999728630011014530220843477644807999999--------


Q ss_pred             HHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             01114688885304321001121125777435689988742265111589729999525669887789999999999985
Q batch____       102 TRTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDVAQQSALDKILSALCQ  181 (249)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~lS~g~~~~~~~a~~l~~~a~~l~~~p~ililDEPt~gLD~~~~~~i~~~l~~l~~  181 (249)
                                                                    +..+|+++++||. .-+|..    +.+.++.+.+
T Consensus        80 ----------------------------------------------l~~~~dvIiIDE~-qfl~~~----~~e~~~~l~~  108 (193)
T c2ja1A_          80 ----------------------------------------------ITEELDVIAIDEV-QFFDGD----IVEVVQVLAN  108 (193)
T ss_dssp             ----------------------------------------------CCSSCCEEEESSG-GGSCTT----HHHHHHHHHH
T ss_pred             ----------------------------------------------HHCCCCEEEECCH-HHCCHH----HHHHHHHHHH
T ss_conf             ----------------------------------------------7449989998685-438988----9999999997


Q ss_pred             HCCEEEEEE----------CCHHHHHHHCCEEEEEE
Q ss_conf             097599996----------79899998589899985
Q batch____       182 QGLAIVMSS----------HDLNHTLRHAHRAWLLK  207 (249)
Q Consensus       182 ~g~tiI~~t----------h~~~~~~~~~drv~vl~  207 (249)
                      .|..|++..          --...+..+||.+.-+.
T Consensus       109 ~g~~Vi~~gl~~~~~~~~f~~~~~L~~~ad~i~~l~  144 (193)
T c2ja1A_         109 RGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQ  144 (193)
T ss_dssp             TTCEEEEEEESBCTTSCBCSSHHHHHHHCSEEEECC
T ss_pred             CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEE
T ss_conf             798799994454122460247999998642100312