Phyre 2 alignment of P45848 with c3n39D_

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Job Description | P45848
Confidence | 5.53% | Date | Thu Jan 5 12:03:51 GMT 2012
Rank | 50 | Aligned Residues | 29
% Identity | 14% | Template | c3n39D_
PDB info | PDB header:oxidoreductase | Chain: D: PDB Molecule:protein nrdi; | PDBTitle: ribonucleotide reductase dimanganese(ii)-nrdf from escherichia coli in2 complex with nrdi
Resolution | 2.50 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 546 | . | . | . | 550 | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | 560 | . | . | . | . | . | . | . | . | . | 570 |  | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Query Sequence |  | R | R | K | G | E | T | R | K | L | D | Y | A | L | L | . | . | . | . | . | . | . | . | G | W | A | I | S | A | N | L | G | R | E | . | W | A | L | R | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  | . |  |  |  |  |  |  | . |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | T | A | G | A | V | P | R | Q | V | I | R | F | L | N | D | E | H | N | R | A | L | L | R | G | V | . | I | A | S | G | N | R | N | F | G | E | A | Y
Template Known Secondary structure |  | S | S | S | T | T | S |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  | T |  |  |  |  | . |  |  |  |  |  | G | G | G | G | G | G | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 53 | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |  | . | 80 | . | . | . | . | . | . | . | . | . | 90

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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