Phyre 2 alignment of P45848 with c3pmrB_

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Job Description | P45848
Confidence | 5.92% | Date | Thu Jan 5 12:03:51 GMT 2012
Rank | 46 | Aligned Residues | 26
% Identity | 27% | Template | c3pmrB_
PDB info | PDB header:cell adhesion | Chain: B: PDB Molecule:amyloid-like protein 1; | PDBTitle: crystal structure of e2 domain of human amyloid precursor-like protein2 1
Resolution | 2.11 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 527 | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | E | A | I | V | N | Y | L | A | R | K | E | A | A | T | H | S | G | R | R | R | K | G | E | T | R | K | L | D | Y | A | L | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | L | A | L | R | R | Y | L | R | A | E | Q | K | E | Q | R | . | . | . | . | . | . | . | H | T | L | R | H | Y | Q | H | V | A
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 472 | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . |  |  |  |  |  |  |  | . | . | 490 | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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