Phyre 2 alignment of P45848 with c2rngA_

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Job Description | P45848
Confidence | 16.85% | Date | Thu Jan 5 12:03:51 GMT 2012
Rank | 17 | Aligned Residues | 45
% Identity | 13% | Template | c2rngA_
PDB info | PDB header:antimicrobial protein | Chain: A: PDB Molecule:big defensin; | PDBTitle: solution structure of big defensin
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 577 | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . |  |  |  |  |  | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | S | L | S | S | A | I | R | A | P | E | I | A | R | N | G | V | L | F | S | L | Q | T | H | L | S | C | G | A | N | . | . | . | . | . | T | S | L | L | G | R | S | Y | S | G | G | G | A | G | G
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | A | Y | L | V | A | L | V | G | A | A | A | V | T | A | A | N | I | R | R | A | S | S | D | N | H | S | C | A | G | N | R | G | W | C | R | S | K | C | F | R | H | E | Y | V | D | T | Y | Y | S | A
Template Known Secondary structure |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  | T | T |  |  |  |  | S | S | S |  |  |  |  | T | T | T | T |  |  |  |  | S | S |  |  | T | T |  |  |  |  | T | T | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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