BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (396 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P39347 Putative prophage P4 integrase n=97 Tax=Enteroba... 823 0.0 UniRef50_Q8VQN9 CP4-like integrase n=87 Tax=Enterobacteriaceae R... 572 e-162 UniRef50_P08320 Integrase n=31 Tax=root RepID=VINT_BPP4 477 e-133 UniRef50_B5F474 Integrase n=26 Tax=Proteobacteria RepID=B5F474_S... 466 e-130 UniRef50_C7SIL5 Integrase B n=113 Tax=Gammaproteobacteria RepID=... 435 e-120 UniRef50_Q0P7K9 Bacteriophage integrase n=8 Tax=Enterobacteriace... 429 e-118 UniRef50_C1D8D2 CP4 integrase protein n=12 Tax=Proteobacteria Re... 427 e-118 UniRef50_C1M393 Bacteriophage integrase n=1 Tax=Citrobacter sp. ... 419 e-116 UniRef50_D0BVL9 Phage integrase n=2 Tax=Acinetobacter RepID=D0BV... 378 e-103 UniRef50_C6UP78 Integrase n=13 Tax=Escherichia coli O157:H7 RepI... 357 5e-97 UniRef50_C6V8W5 Integrase n=4 Tax=Enterobacteriaceae RepID=C6V8W... 348 2e-94 UniRef50_Q9RM38 Integrase (Fragment) n=56 Tax=Enterobacteriaceae... 318 2e-85 UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4S... 316 9e-85 UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX 312 1e-83 UniRef50_B1JLR8 Integrase family protein n=1 Tax=Yersinia pseudo... 310 5e-83 UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacter... 305 2e-81 UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio s... 293 8e-78 UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp... 282 1e-74 UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronos... 277 4e-73 UniRef50_A3M8S0 Putative integrase n=1 Tax=Acinetobacter baumann... 270 5e-71 UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria... 268 2e-70 UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VM... 263 1e-68 UniRef50_Q5R097 Integrase n=2 Tax=Idiomarina RepID=Q5R097_IDILO 261 4e-68 UniRef50_Q2T016 Site-specific recombinase, phage integrase famil... 260 7e-68 UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root Rep... 259 1e-67 UniRef50_B1Y3M2 Integrase family protein n=4 Tax=Proteobacteria ... 258 3e-67 UniRef50_C0N6F7 Site-specific recombinase, phage integrase famil... 258 3e-67 UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfo... 258 4e-67 UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTA... 257 5e-67 UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli R... 257 6e-67 UniRef50_Q3SHC8 Probable cp4-like integrase protein n=1 Tax=Thio... 256 1e-66 UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacte... 254 5e-66 UniRef50_Q2N8A1 Symbiosis island integrase n=12 Tax=Bacteria Rep... 250 7e-65 UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomo... 249 1e-64 UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter ... 248 3e-64 UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio... 248 3e-64 UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea... 246 8e-64 UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillu... 245 2e-63 UniRef50_A1VQL7 Phage integrase family protein n=2 Tax=Burkholde... 242 2e-62 UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella fer... 242 2e-62 UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomo... 241 5e-62 UniRef50_UPI0000F2F6E4 putative integrase n=1 Tax=Acinetobacter ... 240 8e-62 UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae R... 238 3e-61 UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadacea... 238 4e-61 UniRef50_B9NUX0 Site-specific recombinase, phage integrase famil... 236 8e-61 UniRef50_Q0C1T8 Site-specific recombinase, phage integrase famil... 235 2e-60 UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio R... 235 2e-60 UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholde... 233 8e-60 UniRef50_C6XEE3 Integrase family protein n=2 Tax=Proteobacteria ... 233 1e-59 UniRef50_Q167M4 CP4-like integrase, putative n=40 Tax=Alphaprote... 232 2e-59 UniRef50_B4X5T7 Site-specific recombinase, phage integrase famil... 230 8e-59 UniRef50_D0W4G5 Site-specific recombinase, phage integrase famil... 229 2e-58 UniRef50_B1Y106 Integrase family protein n=1 Tax=Leptothrix chol... 228 4e-58 UniRef50_B7I6Z3 Site-specific recombinase, phage integrase famil... 224 6e-57 UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacte... 223 6e-57 UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholde... 221 3e-56 UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacte... 221 5e-56 UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalole... 220 7e-56 UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepI... 220 8e-56 UniRef50_C6RSU9 Phage integrase family protein n=3 Tax=Acinetoba... 220 9e-56 UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingell... 219 2e-55 UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochl... 219 2e-55 UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola... 218 3e-55 UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobac... 218 3e-55 UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobac... 218 4e-55 UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteob... 218 4e-55 UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas flu... 216 2e-54 UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepI... 213 7e-54 UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovoran... 213 8e-54 UniRef50_C8UI65 Putative integrase n=1 Tax=Escherichia coli O111... 212 2e-53 UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammapro... 211 3e-53 UniRef50_B7MX56 Integrase from prophage n=96 Tax=Gammaproteobact... 211 5e-53 UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium ... 209 1e-52 UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5... 209 2e-52 UniRef50_Q46Z79 Phage integrase n=1 Tax=Ralstonia eutropha JMP13... 207 4e-52 UniRef50_A6QCY9 Site-specific recombinase, phage integrase famil... 207 6e-52 UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enter... 206 1e-51 UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobac... 205 2e-51 UniRef50_Q0BR52 DNA integration/recombination/inversion protein ... 205 2e-51 UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 Re... 205 3e-51 UniRef50_A6SWC6 Prophage integrase n=1 Tax=Janthinobacterium sp.... 205 3e-51 UniRef50_B6BKY5 DNA integration/recombination/inversion protein ... 204 4e-51 UniRef50_A1W8P6 Phage integrase family protein n=4 Tax=Comamonad... 204 4e-51 UniRef50_Q0I4F8 Integrase n=1 Tax=Haemophilus somnus 129PT RepID... 204 7e-51 UniRef50_Q1NGR6 Putative phage integrase n=1 Tax=Sphingomonas sp... 203 9e-51 UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, pha... 202 1e-50 UniRef50_A5EUW8 Bacteriophage P4-like integrase n=3 Tax=root Rep... 202 2e-50 UniRef50_A9I0E1 Phage-related integrase n=5 Tax=Burkholderiales ... 202 2e-50 UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV 199 2e-49 UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomon... 199 2e-49 UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio ... 199 2e-49 UniRef50_C8NCE3 Phage integrase family site-specific recombinase... 198 2e-49 UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804... 198 2e-49 UniRef50_Q8W6M6 Putative uncharacterized protein orf1 n=1 Tax=Si... 198 3e-49 UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobac... 196 2e-48 UniRef50_D1B120 Integrase family protein n=1 Tax=Sulfurospirillu... 195 3e-48 UniRef50_Q1QLT5 Phage integrase n=2 Tax=Alphaproteobacteria RepI... 194 4e-48 UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrop... 193 1e-47 UniRef50_D0J426 Phage integrase n=1 Tax=Comamonas testosteroni C... 189 1e-46 UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C... 189 1e-46 UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophil... 189 2e-46 UniRef50_A5PCI3 Phage integrase n=1 Tax=Erythrobacter sp. SD-21 ... 189 2e-46 UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria R... 188 3e-46 UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombina... 188 4e-46 UniRef50_C7HXY0 Integrase family protein n=1 Tax=Thiomonas inter... 187 5e-46 UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_P... 187 7e-46 UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus p... 185 2e-45 UniRef50_C8Q072 Phage integrase family protein n=1 Tax=Enhydroba... 182 1e-44 UniRef50_B5J5X2 Site-specific recombinase, phage integrase famil... 181 4e-44 UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteria... 180 6e-44 UniRef50_A1SRI6 Phage integrase family protein n=2 Tax=Alteromon... 180 8e-44 UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_A... 179 2e-43 UniRef50_D0SUB2 Predicted protein n=2 Tax=Acinetobacter RepID=D0... 178 3e-43 UniRef50_C0VMY9 Integrase n=1 Tax=Acinetobacter sp. ATCC 27244 R... 176 1e-42 UniRef50_Q0I4P6 Integrase n=14 Tax=Pasteurellaceae RepID=Q0I4P6_... 176 1e-42 UniRef50_UPI0000E0F7C9 site-specific recombinase, phage integras... 176 1e-42 UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJ... 176 2e-42 UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepI... 176 2e-42 UniRef50_Q4QL03 Prophage CP4-57-like integrase n=11 Tax=Haemophi... 175 2e-42 UniRef50_A3UDD1 Symbiosis island integrase n=1 Tax=Oceanicaulis ... 173 1e-41 UniRef50_A1WP11 Phage integrase family protein n=1 Tax=Vermineph... 173 1e-41 UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammapro... 172 2e-41 UniRef50_A3ZAX6 Prophage CP4-like integrase n=2 Tax=Synechococcu... 169 1e-40 UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IG... 166 1e-39 UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157... 166 1e-39 UniRef50_D2M358 Integrase family protein n=1 Tax=Rhodopseudomona... 166 1e-39 UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion p... 166 2e-39 UniRef50_Q5LS43 Site-specfic recombinase, phage integrase family... 165 2e-39 UniRef50_C6ALW6 Prophage integrase n=2 Tax=Pasteurellaceae RepID... 164 6e-39 UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria ... 164 7e-39 UniRef50_Q4K6S7 Site-specific recombinase, phage integrase famil... 162 2e-38 UniRef50_B3GXJ8 Prophage CP4-57 integrase n=4 Tax=Pasteurellacea... 160 1e-37 UniRef50_A9MQQ9 Putative uncharacterized protein n=9 Tax=Salmone... 159 1e-37 UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZ... 159 1e-37 UniRef50_B9D1P3 DNA integration/recombination/inversion protein ... 158 3e-37 UniRef50_B6WTC3 Putative uncharacterized protein n=1 Tax=Desulfo... 158 3e-37 UniRef50_A7H0X5 DNA integration/recombination/inversion protein ... 156 1e-36 UniRef50_D0D2S4 Site-specfic recombinase, phage integrase family... 156 1e-36 UniRef50_C9M6R5 Site-specific recombinase, phage integrase famil... 155 2e-36 UniRef50_A4VPC8 Site-specific recombinase, phage integrase famil... 155 2e-36 UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID... 155 3e-36 UniRef50_A8EUF6 Putative phage integrase n=1 Tax=Arcobacter butz... 155 3e-36 UniRef50_Q3JXH9 Integrase or site-specific recombinase n=24 Tax=... 154 4e-36 UniRef50_C6RLT7 Phage integrase n=2 Tax=Acinetobacter radioresis... 154 5e-36 UniRef50_A7JWM6 Possible bacteriophage integrase n=3 Tax=Pasteur... 154 6e-36 UniRef50_A7H3V7 Putative site-specific recombinase, phage integr... 153 1e-35 UniRef50_A7ZG37 Symbiosis island integrase n=3 Tax=Campylobacter... 152 2e-35 UniRef50_B4WZP4 Site-specific recombinase, phage integrase famil... 152 2e-35 UniRef50_D0SVD1 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 151 3e-35 UniRef50_B7UP04 Predicted integrase n=24 Tax=Proteobacteria RepI... 150 8e-35 UniRef50_UPI00016B13C2 phage integrase family protein n=1 Tax=Bu... 150 9e-35 UniRef50_B5JZM6 Site-specfic recombinase, phage integrase family... 150 1e-34 UniRef50_C8T7N5 Phage integrase family site-specific recombinase... 149 2e-34 UniRef50_D0CDZ4 DNA integration/recombination/inversion protein ... 148 3e-34 UniRef50_C6N3S0 Putative phage integrase family protein n=1 Tax=... 147 5e-34 UniRef50_A7JZW2 Site-specific recombinase, phage integrase famil... 147 7e-34 UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EV... 147 7e-34 UniRef50_D1Y3S1 Site-specific recombinase, phage integrase famil... 147 9e-34 UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria ... 147 1e-33 UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae ... 143 1e-32 UniRef50_UPI00016954D2 DNA integration/recombination/inversion p... 143 1e-32 UniRef50_A3M8T8 Phage integrase n=1 Tax=Acinetobacter baumannii ... 142 2e-32 UniRef50_A9VZC1 Integrase family protein n=3 Tax=Alphaproteobact... 142 2e-32 UniRef50_Q0I233 Phage integrase n=5 Tax=Pasteurellaceae RepID=Q0... 142 2e-32 UniRef50_A8EWJ5 Phage integrase n=1 Tax=Arcobacter butzleri RM40... 142 3e-32 UniRef50_C1D7T3 Integrase n=2 Tax=Laribacter hongkongensis HLHK9... 142 3e-32 UniRef50_A4BQA0 Prophage CP4-like integrase n=1 Tax=Nitrococcus ... 140 6e-32 UniRef50_C8Q013 Phage integrase n=1 Tax=Enhydrobacter aerosaccus... 140 7e-32 UniRef50_A5G0X3 Putative uncharacterized protein n=2 Tax=Acidiph... 140 8e-32 UniRef50_Q2NDX8 Site-specfic recombinase, phage integrase family... 140 9e-32 UniRef50_D1D4Y4 Site-specific recombinase n=19 Tax=Neisseria Rep... 137 5e-31 UniRef50_D1Y2Y2 DNA integration/recombination/inversion protein ... 134 9e-30 UniRef50_C5V760 Integrase family protein n=1 Tax=Gallionella fer... 133 9e-30 UniRef50_Q1QAC1 Phage integrase n=2 Tax=Psychrobacter RepID=Q1QA... 133 1e-29 UniRef50_C7I5J5 Integrase family protein n=2 Tax=Thiomonas inter... 133 1e-29 UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3... 132 2e-29 UniRef50_Q1N9F3 Putative integrase prophage protein n=1 Tax=Sphi... 132 2e-29 UniRef50_D1AZM1 Integrase family protein n=1 Tax=Sulfurospirillu... 132 2e-29 UniRef50_Q12EX0 Phage integrase n=5 Tax=Proteobacteria RepID=Q12... 132 3e-29 UniRef50_B8F737 Phage integrase family site specific recombinase... 131 4e-29 UniRef50_A5UG79 Prophage integrase n=1 Tax=Haemophilus influenza... 131 5e-29 UniRef50_C5F036 30S ribosomal protein S15 n=3 Tax=Campylobactera... 130 9e-29 UniRef50_C7JFF4 Phage integrase n=8 Tax=Acetobacter pasteurianus... 129 1e-28 UniRef50_C8PFJ4 DNA integration/recombination/inversion protein ... 129 2e-28 UniRef50_Q8DF52 Phage integrase n=1 Tax=Vibrio vulnificus RepID=... 128 3e-28 UniRef50_UPI00019779C7 integrase n=1 Tax=Helicobacter cinaedi CC... 128 3e-28 UniRef50_Q4FSX1 Probable phage integrase n=1 Tax=Psychrobacter a... 128 4e-28 UniRef50_A7MTK6 Putative uncharacterized protein n=1 Tax=Vibrio ... 128 4e-28 UniRef50_D2MI75 Phage integrase family protein n=1 Tax=Candidatu... 127 5e-28 UniRef50_A6Q4N1 Site-specific recombinase, phage integrase famil... 127 1e-27 UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphil... 124 5e-27 UniRef50_C8PUK8 Phage integrase family protein n=1 Tax=Enhydroba... 123 1e-26 UniRef50_B5WB94 Integrase n=1 Tax=Burkholderia sp. H160 RepID=B5... 123 1e-26 UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella Rep... 122 2e-26 UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE4... 122 2e-26 UniRef50_C7JAN4 Phage integrase n=17 Tax=Acetobacteraceae RepID=... 122 3e-26 UniRef50_B5AXB8 Putative integrase n=1 Tax=Escherichia coli RepI... 121 3e-26 UniRef50_B0VTB2 Putative prophage integrase n=1 Tax=Acinetobacte... 121 4e-26 UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium ... 121 4e-26 UniRef50_B7XGJ8 Integrase n=9 Tax=root RepID=B7XGJ8_PSEPU 121 5e-26 UniRef50_D0SVD2 Predicted protein n=2 Tax=Acinetobacter RepID=D0... 121 5e-26 UniRef50_A3JW30 Site-specfic recombinase, phage integrase family... 120 6e-26 UniRef50_B7UT12 Predicted P4-family integrase n=26 Tax=Enterobac... 120 7e-26 UniRef50_C2LK76 Putative uncharacterized protein n=1 Tax=Proteus... 120 7e-26 UniRef50_C6RKK3 Phage integrase n=3 Tax=Acinetobacter RepID=C6RK... 120 1e-25 UniRef50_UPI0001BCF8EC putative bacteriophage integrase n=1 Tax=... 120 1e-25 UniRef50_C7I2C4 Putative integrase n=1 Tax=Thiomonas intermedia ... 118 3e-25 UniRef50_B0U0U5 Phage integrase n=1 Tax=Francisella philomiragia... 118 4e-25 UniRef50_A5WEP7 Phage integrase family protein n=1 Tax=Psychroba... 118 5e-25 UniRef50_Q3J2T0 Putative P4-family integrase n=5 Tax=Rhodobacter... 117 9e-25 UniRef50_A2SG96 Integrase or site-specific recombinase n=19 Tax=... 117 1e-24 UniRef50_A0Q3W3 Phage integrase n=8 Tax=Francisella RepID=A0Q3W3... 116 1e-24 UniRef50_D1UFB2 Integrase family protein n=1 Tax=Burkholderia sp... 116 2e-24 UniRef50_Q92LG2 Phage-related integrase n=1 Tax=Sinorhizobium me... 115 3e-24 UniRef50_A6VNS1 Phage integrase family protein n=7 Tax=Pasteurel... 115 3e-24 UniRef50_Q7VJH4 Integrase n=1 Tax=Helicobacter hepaticus RepID=Q... 115 3e-24 UniRef50_B1FYI2 Integrase family protein n=3 Tax=Burkholderia Re... 114 5e-24 UniRef50_B4SNF6 Integrase family protein n=2 Tax=Proteobacteria ... 113 1e-23 UniRef50_A4A7S2 Phage-related integrase n=1 Tax=Congregibacter l... 113 1e-23 UniRef50_Q7V8P5 Phage integrase n=3 Tax=Cyanobacteria RepID=Q7V8... 113 1e-23 UniRef50_B0QT04 Prophage CP4-57-like integrase n=1 Tax=Haemophil... 112 2e-23 UniRef50_B7A0D7 Integrase n=1 Tax=Escherichia coli O157:H7 str. ... 111 4e-23 UniRef50_B7WXB5 Putative uncharacterized protein n=1 Tax=Comamon... 111 5e-23 UniRef50_D1DCL4 Predicted protein n=8 Tax=Neisseria gonorrhoeae ... 109 2e-22 UniRef50_B0SXU9 Integrase family protein n=6 Tax=Proteobacteria ... 107 6e-22 UniRef50_A4SXW8 Phage integrase family protein n=1 Tax=Polynucle... 107 7e-22 UniRef50_Q1GUV7 Phage integrase n=1 Tax=Sphingopyxis alaskensis ... 106 1e-21 UniRef50_B0T5C0 Integrase family protein n=31 Tax=Proteobacteria... 106 1e-21 UniRef50_A6U968 Phage integrase family protein n=2 Tax=Rhizobial... 105 3e-21 UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas put... 105 4e-21 UniRef50_B9KC61 Site-specific recombinase, phage integrase famil... 103 1e-20 UniRef50_B8IIS8 Integrase family protein n=9 Tax=Alphaproteobact... 103 1e-20 UniRef50_C6XJP3 Integrase family protein n=1 Tax=Hirschia baltic... 103 1e-20 UniRef50_B6JEM3 Phage integrase n=1 Tax=Oligotropha carboxidovor... 102 2e-20 UniRef50_B5J8B6 Site-specific recombinase, phage integrase famil... 102 2e-20 UniRef50_B3R3M6 Prophage integrase n=4 Tax=Bacteria RepID=B3R3M6... 102 3e-20 UniRef50_Q31FR8 Tyrosine recombinase n=1 Tax=Thiomicrospira crun... 100 7e-20 UniRef50_A3UHH5 Site-specfic recombinase, phage integrase family... 100 9e-20 UniRef50_A3J962 Putative integrase prophage protein n=1 Tax=Mari... 100 9e-20 UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium ML... 100 1e-19 UniRef50_B2CG14 Bacteriophage P4-like integrase n=3 Tax=Campylob... 100 1e-19 UniRef50_A1W6C2 Phage integrase family protein n=8 Tax=Burkholde... 100 2e-19 UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacteriu... 100 2e-19 UniRef50_B2U8E1 Integrase family protein n=9 Tax=Proteobacteria ... 99 2e-19 UniRef50_B6C134 Putative uncharacterized protein n=1 Tax=Nitroso... 99 3e-19 UniRef50_Q7U4G9 Phage integrase family n=1 Tax=Synechococcus sp.... 98 6e-19 UniRef50_A0Q4W3 Phage integrase n=4 Tax=Francisella RepID=A0Q4W3... 97 7e-19 UniRef50_Q7MPT5 Site-specific recombinase, phage integrase famil... 97 7e-19 UniRef50_A1U0R6 Phage integrase family protein n=2 Tax=Gammaprot... 97 1e-18 UniRef50_C6RGV6 Phage integrase n=3 Tax=Campylobacter RepID=C6RG... 96 2e-18 >UniRef50_P39347 Putative prophage P4 integrase n=97 Tax=Enterobacteriaceae RepID=INTB_ECOLI Length = 396 Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/396 (100%), Positives = 396/396 (100%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK Sbjct: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL Sbjct: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE Sbjct: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP Sbjct: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS Sbjct: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 Query: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL Sbjct: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 Query: 361 EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ 396 EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ Sbjct: 361 EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ 396 >UniRef50_Q8VQN9 CP4-like integrase n=87 Tax=Enterobacteriaceae RepID=Q8VQN9_ECOLX Length = 421 Score = 572 bits (1474), Expect = e-162, Method: Compositional matrix adjust. Identities = 264/396 (66%), Positives = 325/396 (82%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M LLVHPNGS+YWRL+YR GK+K LALGVYPE++L++AR +RDEARKL++ G+DP ++K Sbjct: 26 MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + KV +F+ +A WH +NK+W++ H+ +VLKSLE ++F +G R+I L T DL Sbjct: 86 RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL 145 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 L P++A E E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+ + RQHRPAL+ Sbjct: 146 LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD 205 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 L R+PELL++I+SY G+P+TR A+ L LL+FIRSSELR+ARWSEID + ++WTIP ER+P Sbjct: 206 LSRLPELLSRINSYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERKP 265 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 +PGVK SHRGSKMRT HLVPLS QA+AIL +++ + G + LIF G HD KP+SENTVN Sbjct: 266 LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK 325 Query: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 ALRVMGYDT EVCGHGFR MACS+L+ESGLWSRDA ERQMSH RN VRAAYIHKAEHL Sbjct: 326 ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAGERQMSHQERNGVRAAYIHKAEHL 385 Query: 361 EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ 396 EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ Sbjct: 386 EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ 421 >UniRef50_P08320 Integrase n=31 Tax=root RepID=VINT_BPP4 Length = 439 Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust. Identities = 227/385 (58%), Positives = 291/385 (75%), Gaps = 2/385 (0%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V GSKYWR++YR + K+ LA GV+P +TLA AR +RDEA+KLL G+DP Sbjct: 30 LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKV 89 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 +K + E S A TF+ +A EWH +NK+WSEDH RVL+ LE +F +G +I +LKT Sbjct: 90 VQKEARAENSGAYTFEAIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS 149 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ+ ID NPA +MAGA+++ +H PA Sbjct: 150 HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA 209 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L R PE L ++ +Y GR +TR A++L+LL F+RSSELRFARW E DF+ S+W IP +R Sbjct: 210 LPSSRFPEFLARLAAYRGRVMTRIAVKLSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR 269 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 E I GV++S+RG KM+ H+VPLS QA+ +L Q+KQ G +L+F GDHD+ K MSENTV Sbjct: 270 EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLNQLKQISGDKELLFPGDHDATKVMSENTV 329 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 NSALR MGYDTK EVCGHGFRTMA +L ESGLWS DA+ERQ+SH RN+VRAAYIH +E Sbjct: 330 NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE 389 Query: 359 HLEERRLMLQWWADFLDVNRERFIS 383 HL+ERRLM+QWWAD+LD+NR ++IS Sbjct: 390 HLDERRLMMQWWADYLDMNRNKYIS 414 >UniRef50_B5F474 Integrase n=26 Tax=Proteobacteria RepID=B5F474_SALA4 Length = 449 Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust. Identities = 220/394 (55%), Positives = 291/394 (73%), Gaps = 2/394 (0%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V P GSKYWR++YR + K+ LA GVYP ITLA+AR +RD A+KLL+ G+DP Sbjct: 55 LYLEVSPKGSKYWRMKYRRPSDKKEDRLAFGVYPTITLAEARAKRDAAKKLLSQGIDPKV 114 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 ++K + E A F+ +A +WH +N WSEDH+HRVL +LE +F ++G+ + L+T Sbjct: 115 EQKGAQAEIEGAYLFETIARQWHASNLTWSEDHSHRVLLTLEQYIFPSIGQIDARTLRTS 174 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 LL PIKAV+ +G+ +VA RL QR AIMR+ VQ+ L++ NPA +MAGA+ S H PA Sbjct: 175 QLLNPIKAVDTAGKHDVAQRLMQRVNAIMRFGVQNDLLESNPASDMAGALLSVKATHHPA 234 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L KRIPE L ++ Y GR +TR A+ELTLL FIRSSE+RFARWSE++FE S WTIP R Sbjct: 235 LPPKRIPEFLERLSRYKGRLMTRLAVELTLLTFIRSSEMRFARWSEVNFERSEWTIPGIR 294 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 +PIPGVKHS RG KM+T H+VPLS QA I K++ G ++IF DHD K MSENTV Sbjct: 295 KPIPGVKHSERGMKMKTEHIVPLSKQAFDIFKRLHALSGKGEVIFPSDHDPKKVMSENTV 354 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 NSALRVMGYDTK EVCGHGFRTMA +L ES LW+ DA+ERQ+SH+ R +V+ +Y+H +E Sbjct: 355 NSALRVMGYDTKTEVCGHGFRTMARGALSESKLWNDDAIERQLSHVERKNVKGSYMHTSE 414 Query: 359 HLEERRLMLQWWADFLDVNRERFISPFEYAKINN 392 +LEERRLMLQWWAD++D N+ I+P+++A+++ Sbjct: 415 YLEERRLMLQWWADYIDANKNGSITPYDFARVHG 448 >UniRef50_C7SIL5 Integrase B n=113 Tax=Gammaproteobacteria RepID=C7SIL5_ECOLX Length = 420 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 212/390 (54%), Positives = 287/390 (73%), Gaps = 1/390 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV P GS++W L+YR GK+ +ALG YP ++L+DAR +R+ RK+LA ++P ++ Sbjct: 26 LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 ++ ++ + FK VA+ WH +N+KWS++ A R+L SL +++F +G ++ELK R Sbjct: 86 AAERGSRTPDKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF 145 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + +K +E G LEVA+R +Q + IMR+AV GLID NPA + G R+H PAL Sbjct: 146 IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPALP 205 Query: 181 LKRIPELLTKIDSY-TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 L+R+PELL +I +Y GR LTR A+ L L +FIRSSELRFARWSEIDF +WTIP RE Sbjct: 206 LERLPELLERIGAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 PI GV++S RG+KMR +H+VPLS Q++AILKQIK G ++LIF GDH+ +KPM ENTVN Sbjct: 266 PIIGVRYSGRGAKMRMSHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN 325 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 ALRVMGYDTK ++CGHGFR MACS+L+ESGLW++DAVERQMSH RN+VR AYIHKAEH Sbjct: 326 KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH 385 Query: 360 LEERRLMLQWWADFLDVNRERFISPFEYAK 389 LE R+ M+QWW+D+L+ RE + P+ K Sbjct: 386 LEARKAMMQWWSDYLEACRESYAPPYTIGK 415 >UniRef50_Q0P7K9 Bacteriophage integrase n=8 Tax=Enterobacteriaceae RepID=Q0P7K9_ECOLX Length = 423 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 210/392 (53%), Positives = 288/392 (73%), Gaps = 1/392 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV P GS+ W L+YR GK+ +ALG YP ++L+DAR +R+ RK+LA ++P ++ Sbjct: 26 LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 ++ + + + FK VA+EWH + KKWS++ A RVL L ++F +G + ELK+R Sbjct: 86 AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF 145 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + +K +E G LEVA+R +Q + IMRYAV GLI+ NPA + G AS R+H P L Sbjct: 146 IELLKGIEEKGLLEVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTLP 205 Query: 181 LKRIPELLTKIDSY-TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 L+R+PELL +IDSY GR LTR A+ LTL +FIRSSELR+ARW+EI+F IWTIP RE Sbjct: 206 LERLPELLERIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 I GV++S RG+KMRT H+VPLS Q ++ILK+IK+ G ++L+F G HD +KPMSENT+N Sbjct: 266 AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN 325 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 ALR MGY+TK ++CGHGFR MACS+L+ESGLWS+DAVERQMSH RN+VR AYIHKAEH Sbjct: 326 KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH 385 Query: 360 LEERRLMLQWWADFLDVNRERFISPFEYAKIN 391 +E R M+QWW+D+LD+ E ++ P+ +++ N Sbjct: 386 MEARMDMMQWWSDYLDMCSEIWVPPYIWSQQN 417 >UniRef50_C1D8D2 CP4 integrase protein n=12 Tax=Proteobacteria RepID=C1D8D2_LARHH Length = 452 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 216/409 (52%), Positives = 276/409 (67%), Gaps = 20/409 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE----------------ITLADARVRRD 44 ++LL++PNGSKYWR+ YR GKQK LA+GVY + ++LADAR+ D Sbjct: 30 LYLLINPNGSKYWRMNYRINGKQKTLAIGVYCQFALVDDKGKARAEQVIMSLADARLHCD 89 Query: 45 EARKLLANGVDPGDKKKNDKVEQS--KARTFKEVAIEWHG-TNKKWSEDHAHRVLKSLED 101 AR +LA G+DP + K+ K + +F VA EWH KW HA VL LE Sbjct: 90 AARAMLAKGIDPFETKQEAKKAANGLSPGSFAYVAREWHAKMANKWVPSHAANVLGRLER 149 Query: 102 NLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPA 161 +F +G AE++T+ +L ++ VE L+V +RL+Q I RYAVQ+G ID+NP Sbjct: 150 YIFPDIGHMPFAEIRTKHMLMALRKVEAKNILDVTSRLRQYLKQIGRYAVQTGRIDFNPG 209 Query: 162 QEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFAR 221 ++ GA+ + HRPAL L R+PELL +ID+ RPLTR AI LTLL F+RSSELRFAR Sbjct: 210 NDLDGALQTRRTVHRPALSLNRLPELLERIDAAKLRPLTRAAISLTLLTFVRSSELRFAR 269 Query: 222 WSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDL 281 W EIDF+ ++W IP ERE +PGVK S RG+KMRT HLVPL QALA+ +++ G +L Sbjct: 270 WEEIDFDRAVWLIPGEREALPGVKFSSRGAKMRTPHLVPLCQQALALFREVHAITGRFEL 329 Query: 282 IFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQM 341 +F GDHD +KPMSE+TVN AL+ MGYDTK EVCGHGFR MACS+L ESG +S +A+ERQM Sbjct: 330 VFAGDHDPYKPMSESTVNIALKRMGYDTKTEVCGHGFRAMACSALSESGQFSIEAIERQM 389 Query: 342 SHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE-RFISPFEYAK 389 SH R+SVRAAY HKAE L ERR M+ WWADFLD RE +I P E+ + Sbjct: 390 SHQERDSVRAAYTHKAEFLTERRDMMGWWADFLDAQREGTYIEPLEFKR 438 >UniRef50_C1M393 Bacteriophage integrase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M393_9ENTR Length = 420 Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust. Identities = 195/390 (50%), Positives = 283/390 (72%), Gaps = 1/390 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L++ +GS+ W ++R+ GKQ +A G YP+IT+ADAR +RD ARKLL +G+ P + + Sbjct: 26 LYLVISNSGSRLWYFRFRFNGKQNRIAFGPYPQITIADARRKRDAARKLLTSGISPSEHR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K++K SK RTF+ +A+ WH + +WSE HA+++L L+ +F +G+++IA+++T Sbjct: 86 KSEKAASSKTRTFQHIALAWHSSCLNRWSEGHANKILVCLQRYVFPYVGKKDIAKIETFH 145 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 L IK V G +VA+R++Q T IMR++VQ GLI YNPA ++ + QH PAL Sbjct: 146 LAELIKEVNNKGVHDVASRIRQYLTKIMRHSVQQGLIHYNPALDLEDIITPVVVQHYPAL 205 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 L+ + ELL KID Y G+ L R A+EL+L +F+R+SELRFARW E + + IWTIP +R+ Sbjct: 206 PLRSLSELLIKIDDYKGQELIRLALELSLHVFLRASELRFARWDEFNMKIHIWTIPAKRK 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 + GV+ S RGSKM+ HLVPLS QA+ IL++IK+ G + +F + ++PMSENT+N Sbjct: 266 AVDGVRFSDRGSKMKEEHLVPLSDQAMKILERIKKISGESEFVFHSIRNLNRPMSENTIN 325 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 ALRV+GY TK +VC HGFRTMACS+L ESG WS+DA+ERQMSH RN+VRAAY+HKAE+ Sbjct: 326 KALRVIGYCTKNDVCAHGFRTMACSALNESGKWSKDAIERQMSHKDRNNVRAAYLHKAEY 385 Query: 360 LEERRLMLQWWADFLDVNRERFISPFEYAK 389 LEER M+QWW+D+L RE++++P+ +A+ Sbjct: 386 LEERFEMMQWWSDYLSTTREKYVAPYIFAR 415 >UniRef50_D0BVL9 Phage integrase n=2 Tax=Acinetobacter RepID=D0BVL9_9GAMM Length = 441 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 183/391 (46%), Positives = 257/391 (65%), Gaps = 5/391 (1%) Query: 3 LLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKK 61 L + +GSK WR +Y R GK ++ LG +P ++L AR +R E LLANG+DP + + Sbjct: 33 LFIRKSGSKVWRFKYKRANGKDGLMTLGNFPALSLKTARDKRRELETLLANGIDPIEYSE 92 Query: 62 NDKVEQSKARTFKEVAIEWHGTNK---KWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K + F+ +A EWH K +W + A R LK++E+ +F LG++ I +K + Sbjct: 93 IQKAKLDNKYNFESIAREWHTAYKNTGRWGTETAERALKNMEEYVFPKLGKKPIDAIKPK 152 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA-VASCNRQHRP 177 +L+ IK++E G EV + +QR T+I +A+ G I+ NPA + + S +H P Sbjct: 153 ELIQVIKSIEDLGYTEVVKKTRQRLTSIFAFAMSKGFIESNPAYGLQDIFILSKKTKHHP 212 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L L+R+PEL K+ S TG P+TR +E L F RSSE+RFARW E DFE +IWTIPP Sbjct: 213 QLPLERLPELQAKLASDTGHPITRLCVEFALHTFARSSEIRFARWKEFDFENAIWTIPPT 272 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R+ + G K+SHRG+KM+T HL+PLS QALAI+K+I ++ G +F + D H MSE+T Sbjct: 273 RDFVEGYKYSHRGAKMKTPHLIPLSNQALAIIKEIYKYSGHTQNVFPKNGDPHGFMSEST 332 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +N LR +GYDT EVCGHGFR MAC++L++S L+ +DAVE+QMSH RN+VR AY HKA Sbjct: 333 INKTLRRLGYDTNTEVCGHGFRGMACAALIQSKLFQKDAVEKQMSHQERNNVRLAYTHKA 392 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFEYA 388 E LEER+ ML WW+ +LDV +E ISP++Y Sbjct: 393 EFLEERKTMLNWWSSYLDVTKETSISPYDYT 423 >UniRef50_C6UP78 Integrase n=13 Tax=Escherichia coli O157:H7 RepID=C6UP78_ECO5T Length = 301 Score = 357 bits (916), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 175/236 (74%), Positives = 201/236 (85%), Gaps = 1/236 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M LLV P GSKYWR ++R+ GKQ ++A GVYP+++LADAR +R+EARKL+A G+DP + K Sbjct: 52 MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK 111 Query: 61 KNDKVEQSK-ARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 + K EQ+K TF++VA EW TN+KWSEDHA+RV KSLEDN+F +G RNIAEL TRD Sbjct: 112 RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPTIGTRNIAELGTRD 171 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDY+PAQEM+GAVAS NRQHRPAL Sbjct: 172 LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYDPAQEMSGAVASSNRQHRPAL 231 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 ELKRIPELL KIDSYTGRPLT ELTLLIFIRSS+L FARWSEIDFE S+WTIP Sbjct: 232 ELKRIPELLDKIDSYTGRPLTHCTTELTLLIFIRSSKLHFARWSEIDFETSMWTIP 287 >UniRef50_C6V8W5 Integrase n=4 Tax=Enterobacteriaceae RepID=C6V8W5_ECOBD Length = 294 Score = 348 bits (894), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 165/290 (56%), Positives = 220/290 (75%), Gaps = 4/290 (1%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M +LVHPN S+YWRL+YR GK+K LALGVYPE++L++AR +RDEARKL++ G+DP ++K Sbjct: 1 MLMLVHPNSSRYWRLRYRILGKEKTLALGVYPEVSLSEARAKRDEARKLISAGIDPCEQK 60 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + KV +F+ +A WH +NK+W++ H+ +VLKSLE ++F +G R+I +L T DL Sbjct: 61 RAKKVVPDLQLSFEHIARRWHASNKQWTQSHSDKVLKSLETHVFPFIGNRDITKLNTPDL 120 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 L P++A E E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+ + RQHRPAL+ Sbjct: 121 LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD 180 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 L R+PELL++I SY G+P+TR A+ L LL+FIRSSELR+ARWSEID E ++WTIP EREP Sbjct: 181 LSRLPELLSRIGSYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIENAMWTIPAEREP 240 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILK---QIKQFYGAHDLIFIGDH 287 +PGV SHRGSKMRT HLVPLS QA+ L ++ D +FI DH Sbjct: 241 LPGVNFSHRGSKMRTPHLVPLSKQAVPSLPPAFPVRMTVQRADCLFI-DH 289 >UniRef50_Q9RM38 Integrase (Fragment) n=56 Tax=Enterobacteriaceae RepID=Q9RM38_ECOLX Length = 304 Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 160/259 (61%), Positives = 198/259 (76%), Gaps = 1/259 (0%) Query: 132 RLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKI 191 +LEVA+R +Q + IMR+AV LID NPA + G R+H PAL L+R+PELL +I Sbjct: 41 KLEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPALPLERLPELLERI 100 Query: 192 DSY-TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRG 250 +Y GR LTR A+ L L +FIRSSELRFARWSEIDF +WTIP REPI GV++S RG Sbjct: 101 GAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRG 160 Query: 251 SKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTK 310 +KMR H+VPLS Q++AILKQIK G ++LIF GDH+ +KPM ENTVN ALRVMGYDTK Sbjct: 161 AKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTK 220 Query: 311 VEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWW 370 ++CGHGFR MACS+L+ESGLW++DAVERQMSH RN+VR AYIHKAEHLE R+ M+QWW Sbjct: 221 KDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWW 280 Query: 371 ADFLDVNRERFISPFEYAK 389 +D+L+ RE + P+ K Sbjct: 281 SDYLEACRESYAPPYTIGK 299 >UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4SSF4_AERS4 Length = 404 Score = 316 bits (810), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 172/394 (43%), Positives = 243/394 (61%), Gaps = 20/394 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV+ +G KYW+L+YR+ GK+K LALGVYPE++L +AR +RDEAR+++A G+DPG + Sbjct: 28 LFLLVNKSG-KYWKLKYRHGGKEKKLALGVYPEVSLREARAKRDEARRVIAEGIDPGLVR 86 Query: 61 KNDKVEQS--KARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K KV + + +A EWH + WS HA RV++SLE ++F LG I EL Sbjct: 87 KQSKVASRLVSENSLEVLAREWHQSQFALWSPGHATRVIESLEVDVFPDLGLVPITELTA 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L ++ VE G E A R+ QR +AIMRYA+Q+G YNPAQ++ GA+ + ++HRP Sbjct: 147 PMILEALRKVEKRGATETAGRILQRVSAIMRYAIQTGRASYNPAQDLRGALKATKQEHRP 206 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 AL +PE ++++ P TR A+ L +L R E+RFARW E D E + W IP Sbjct: 207 ALPRSELPEFFRRLEAEPLNPATRLALHLLMLTMTRPGEVRFARWDEFDMERAEWRIPAA 266 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R KMRT HLVPLS QALA+L ++ Q G +L+F + PMSENT Sbjct: 267 R------------MKMRTEHLVPLSRQALAVLDELHQLTGHCELLFPSERKLTNPMSENT 314 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 ++ A+ MGY K HGFR +A ++L E G + D +ERQ++H RN VRAAY H+A Sbjct: 315 LSYAMGRMGY--KGIATPHGFRALASTTLNEEG-FDPDVIERQLAHAERNKVRAAY-HRA 370 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFEYAKIN 391 E+L++RR +LQW ADF D R + P + ++ Sbjct: 371 EYLDDRRKLLQWLADFYDSQRGSNVLPVNFNRVG 404 >UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX Length = 394 Score = 312 bits (800), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 157/378 (41%), Positives = 240/378 (63%), Gaps = 19/378 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M+LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K Sbjct: 26 MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K+ Q S TF+ +A EWH + +WS + ++ + E ++F +G+R IAE+K Sbjct: 86 KEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LL ++ +E G LE +++QR + RYA+ +G DYNPA ++A A+A+ + H P Sbjct: 146 MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L +P L + YTG +T+ A ++ +L +R+ ELRFARW +IDFE +W IP E Sbjct: 206 FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 KM+ H+VPLS Q + + KQ++ H L+FIG +D KP+S+ + Sbjct: 266 V------------MKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES 313 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +N + ++GY K + GHGFR + L E G S +E Q++H+ +NS+R Y H A Sbjct: 314 INQVIELLGY--KGRLTGHGFRHTMSTILHEQGFNSA-WIEMQLAHVDKNSIRGTYNH-A 369 Query: 358 EHLEERRLMLQWWADFLD 375 +L+ RR M+QW+AD++D Sbjct: 370 LYLDGRREMMQWYADYID 387 >UniRef50_B1JLR8 Integrase family protein n=1 Tax=Yersinia pseudotuberculosis YPIII RepID=B1JLR8_YERPY Length = 269 Score = 310 bits (794), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 144/172 (83%), Positives = 156/172 (90%) Query: 203 AIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLS 262 A+ELTLL+FIRSSELRFARWSE+DFE ++WTIP EREP+ GVKHSHRGSKMRT HLVPLS Sbjct: 87 AVELTLLVFIRSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGSKMRTPHLVPLS 146 Query: 263 TQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMA 322 QALAIL++IK G +LIFIGDHD KPMSENTVN ALRVMGYDTKVEVCGHGFRTMA Sbjct: 147 RQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKVEVCGHGFRTMA 206 Query: 323 CSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 CSSL+ESGLWSRDAVERQMSH RNSVRAAYIHKAEHL+ERRLM+QWWADF Sbjct: 207 CSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWADFF 258 >UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacteria RepID=B4RZR6_ALTMD Length = 412 Score = 305 bits (781), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 165/384 (42%), Positives = 231/384 (60%), Gaps = 22/384 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV NGSKYWRL+YR++GKQK LA+GVYPE++L DAR EAR+ L + +DP K Sbjct: 26 LRLLVKKNGSKYWRLKYRFQGKQKTLAIGVYPEVSLKDAREAVSEARRQLRDDIDPSAIK 85 Query: 61 KNDK--VEQSKARTFKEVA-IEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K S+ F A + W+ +WSE HA R+ L DN LG+R I E+ Sbjct: 86 QEKKHLSSVSEIELFNTQARLWWNKQKGQWSEGHAARIWTRLNDNALKTLGKRPIGEITP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +D++ ++ +E G L+VA R+ Q + R+AVQ+G++ +NPA E++G + HR Sbjct: 146 QDIIRTVQKIETRGALDVAQRVLQDIRRVCRFAVQTGVLLHNPASELSGILEKRKTSHRA 205 Query: 178 ALELKRIPELLTKIDSY--TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 +L + +P+ L +D+Y GR LT+ AIEL + F+R EL ARW E D E +W IP Sbjct: 206 SLPREELPQFLRDLDAYHQQGRLLTKLAIELLVHTFVRPGELAGARWDEFDLEEKLWRIP 265 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R KM++ H+VPLS QALA+L+ K F + +F + D K MS+ Sbjct: 266 AHR------------MKMKSDHIVPLSRQALAVLENTKPFSARFEFVFPSERDRFKQMSD 313 Query: 296 NTVNSALRVMGYD----TKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 NT+ A+ MGYD K + HGFR A S L E+G + DA+ERQ+SHM RN VRA Sbjct: 314 NTMRMAIFRMGYDGETKGKSKANPHGFRATASSILNETGF-NPDAIERQLSHMERNGVRA 372 Query: 352 AYIHKAEHLEERRLMLQWWADFLD 375 AY H A +LEER+ M+QWW+D+LD Sbjct: 373 AYTHHARYLEERKEMMQWWSDYLD 396 >UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L516_9DELT Length = 417 Score = 293 bits (750), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 161/386 (41%), Positives = 232/386 (60%), Gaps = 25/386 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P G K WR +Y ++GK+K+LALG +P++ L AR RRDEAR L+A GVDP +K+ Sbjct: 31 LFLQVTPTGGKLWRFKYLFDGKEKLLALGKWPDVGLKMARQRRDEARALVAQGVDPSEKR 90 Query: 61 KNDKVEQ-----SKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 K D+ + A TF VA +WH K WSE HA ++L +E +LF G I Sbjct: 91 KQDRADAEGQAVENANTFAVVARDWHAKQVKVWSEGHAAKILARMEQHLFPVFGNIPITT 150 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 L+ +L ++ +E G E A RL+Q A+ +A+ +G+ + N ++ GA+A C Sbjct: 151 LRAPAILPTLRDIEDKGNHETAKRLRQYCEAVFTFAISTGIAERNVGADLRGALAPCRAT 210 Query: 175 HRPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI-- 231 +RPA ++ K + +LL ID Y G P+T A+ L L+F+R ELR A WSEID +A+ Sbjct: 211 NRPAIIDPKGVAQLLRAIDGYQGSPVTVAALRLAPLVFVRPGELRQAEWSEIDLDAADGP 270 Query: 232 -WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 W+IP E+ KMR H+VPLS QA+ I+ +I G +F + Sbjct: 271 RWSIPAEK------------MKMRRDHVVPLSKQAVDIITEIYSLTGQDRYLFPCNRTKG 318 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 + MS +N+ALR MGY+ + E+C HGFR MA + L E G W+ D +ERQ++H RNS+R Sbjct: 319 RCMSNMALNAALRRMGYE-QGEMCAHGFRAMASTLLNELG-WNSDLIERQLAHAERNSIR 376 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDV 376 AAY ++AE+L ERR M+Q WAD+LD+ Sbjct: 377 AAY-NRAEYLPERRRMMQAWADYLDM 401 >UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MJ08_9PROT Length = 418 Score = 282 bits (722), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 156/380 (41%), Positives = 229/380 (60%), Gaps = 19/380 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M++ V PNG+KYWR+ YR+ KQK LALGVYP++TLADAR RR+EARKLLANG DPG K Sbjct: 26 MYIEVKPNGAKYWRMAYRFADKQKTLALGVYPDVTLADARDRRNEARKLLANGADPGAVK 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 ++ K + + + +F+ +A E+H WS +HA +K+LE +F G I+E+ Sbjct: 86 QSQKKQAKIAASNSFELIAREFHSLKTPMWSTNHAADWIKTLEREIFPKFGNYPISEIDA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-QHR 176 +L I+A+E EVAAR+ QR A+ YA+ +G +NPA E+ GA+A + +H Sbjct: 146 PAVLDAIRAIESRDAHEVAARVLQRVRAVCAYAIATGRARHNPASEIKGALAPQPKIKHF 205 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 AL K +P+ L + +Y PLT++A L +L F+R+ E+R A+W E D +A +W IP Sbjct: 206 AALTEKELPDFLRAVAAYPCYPLTKYATALLMLTFVRTGEVRGAKWCEFDLDAKLWKIPA 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER K R H+VPL+ QA+ IL ++ G + +F + K +SEN Sbjct: 266 ER------------MKSREPHIVPLAKQAIEILGELHPLTGHGEHLFPNRTGNGKVISEN 313 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 TV + +GY K + GHGFRT+A + L G+ D +E Q++H N+ RAAY ++ Sbjct: 314 TVLKVIERLGY--KGRMTGHGFRTIASTYLNGVGMIRPDVIEAQLAHTEANATRAAY-NR 370 Query: 357 AEHLEERRLMLQWWADFLDV 376 A ++E R M+Q+WAD LD Sbjct: 371 ANYMEYRAAMMQFWADTLDA 390 >UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR55_9DELT Length = 401 Score = 277 bits (709), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 153/377 (40%), Positives = 228/377 (60%), Gaps = 19/377 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M+L V P G K WR +YR+ GK K+LALG YP+++LA AR + AR+ +A G DP K Sbjct: 26 MYLEVTPAGGKLWRFKYRFNGKNKLLALGKYPDVSLAKAREKLSIARQQIAEGKDPAYIK 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K +K E K TFK + EW K W+ HA +V + LE ++ L +R I E+ R+ Sbjct: 86 KIEKAE--KENTFKAITDEWWRAKKSTWTPGHAEKVYRRLEIDVLPYLKDRPIKEITARE 143 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +L +K E G + A RL Q + I +A+ SG ++NPA +++ A+ + + +RPA+ Sbjct: 144 ILEVLKKAEARGVTDTAYRLAQMCSNIFIFALASGRAEHNPAADISKALTAHPKTNRPAI 203 Query: 180 -ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 E I ELL ID +TG A+++ +L+F+R ELR A W+EI+F+ ++W +P +R Sbjct: 204 TEPDEIKELLLAIDGFTGSYTVLCALKIAILVFVRPGELRQASWAEINFDEALWYVPSQR 263 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 KM+ HLVPLS QA+ ILK I GA +F + +PMSENT+ Sbjct: 264 ------------MKMKREHLVPLSGQAVKILKDIHPLTGAGHYVFPSIRTNSRPMSENTL 311 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 N+ALR +GY + ++C HGFRTMA + L E G W D +E Q++H+ +N +R Y ++AE Sbjct: 312 NAALRRLGYPQE-KLCAHGFRTMASTRLHEMG-WPSDIIEFQLAHVDQNKIRGIY-NRAE 368 Query: 359 HLEERRLMLQWWADFLD 375 +L++R M+Q WAD+LD Sbjct: 369 YLDQRTKMMQAWADYLD 385 >UniRef50_A3M8S0 Putative integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M8S0_ACIBT Length = 433 Score = 270 bits (691), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 157/396 (39%), Positives = 234/396 (59%), Gaps = 9/396 (2%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V P G+K W +Y G K++ + LG YP ++LA AR ++ E +++A GVDP + Sbjct: 31 LYLRVRPTGAKSWIFRYTNRGNDKREKITLGPYPALSLAKAREKKHEFLRMIAEGVDPKE 90 Query: 59 KKKNDKVEQSKARTFKEVAIEW---HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + +++ T + V W + K SED ++ L+ E++LF ++ I ++ Sbjct: 91 QLSILLAKKNNVNTLENVVRVWLDAYAVRKPLSEDTKNKQLRKFENHLFPKFKDKAIEQI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 RDL + + + A R++ + YAVQ I N A+++ S + H Sbjct: 151 TLRDLKDALNVI-YDHSPDNAQRIRASLIQVYSYAVQHSYIQTNIARDLEDMDLSARKNH 209 Query: 176 RPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 R L IP+L+ +I + +G PLT+ + L L F+RSSE+RFARW+EIDFEA IW I Sbjct: 210 RATFRSLDLIPQLIRRIKADSGNPLTKLCLLLGLHTFLRSSEIRFARWNEIDFEAEIWRI 269 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 PP R I GVKHS RG+KM+ HLVPLS Q++ IL+++ Q+ G D +F ++ +S Sbjct: 270 PPRRRLIEGVKHSDRGAKMKEEHLVPLSKQSIEILEKVYQYSGDCDFVFPSLNNKRIFIS 329 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 ENT N ALR MGY TK E+ HGFR +A S+L E ++SRDA+E+QMSH RN AY Sbjct: 330 ENTPNDALRRMGY-TKEEISFHGFRALARSALGEMSIFSRDALEKQMSHQERNETVGAYT 388 Query: 355 HKAEHLEERRLMLQWWADFLD-VNRERFISPFEYAK 389 H AE+LEER ++Q W+D+L + +ISP EY + Sbjct: 389 HIAEYLEEREKIMQIWSDWLSAIENGDYISPHEYGR 424 >UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria RepID=A4JAY4_BURVG Length = 405 Score = 268 bits (686), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 154/391 (39%), Positives = 226/391 (57%), Gaps = 19/391 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + +GSK WRL+YR+ GK+ +L G YP +LADAR RRDEA++LLA G +P ++ Sbjct: 30 LYLDLRSSGSKKWRLKYRFNGKENLLTFGDYPATSLADARSRRDEAKRLLAEGKNPAFER 89 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 +K ++ A TF+ VA+EW+ + WS HA+RV K L+ +F +G+R I+ + Sbjct: 90 DVEKQTRAIAAQNTFEAVALEWYEAQQATWSASHANRVKKQLDREVFPLIGQRPISSIGA 149 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 DLLA ++ +E E A + Q + RYAV + + +P+ ++ GA+ + +H Sbjct: 150 PDLLAVVRRIEGREAFETARKTLQTCGQVFRYAVATSRAERDPSPDLRGALKAVPVKHMA 209 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + +PELL I SY G P TR A+ L F+R+ ELR A W+EID E W IP E Sbjct: 210 RVGESELPELLRSIASYEGEPETRLALRFLALTFVRTIELRQAEWTEIDLERREWRIPAE 269 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 + KMR H+VPL+ QA+A+L +++ G +F + MSENT Sbjct: 270 K------------MKMRRVHIVPLAEQAIALLSELRALTGHRRWLFPNSRRPLQQMSENT 317 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + AL MGY ++ + GHGFR +A + L E G S D +ERQ++H ++ VRAAY H A Sbjct: 318 ILYALYRMGYRSR--MTGHGFRGLASTILNEKGFNS-DWIERQLAHSEQDGVRAAYNH-A 373 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFEYA 388 E+L ER M+QWWAD+LD I P A Sbjct: 374 EYLSERHRMMQWWADYLDKQSGAQIIPIAAA 404 >UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VMW7_9GAMM Length = 419 Score = 263 bits (671), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 146/387 (37%), Positives = 229/387 (59%), Gaps = 21/387 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+G ++WRL+YR+ G++ L +G YPEI+LA AR RDEAR L + +DP + Sbjct: 45 LYLEVTPSGGRFWRLKYRFNGRESTLTIGSYPEISLAQARRARDEARIQLYSNIDP-NAV 103 Query: 61 KNDKVEQS-KARTFKEVAIEWHGTNKKWSEDHAH-RVLKSLEDNLFAALGERNIAELKTR 118 KN +++Q+ ++ FK +A+EW K ++ + R L E +LF ALG I ++K + Sbjct: 104 KNQRLQQTDESILFKSLAMEWMEDRKAVIKETTYLRDLSVFEKDLFPALGNMPIDQIKGK 163 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 D+LA K +E G LE+A R T I R+A++ G+++ +P + A+ +H Sbjct: 164 DVLACAKKIEARGALEMAKRSIPLTGRIFRFAIRKGIMENDPTPHLQEALKPRKVKHMAR 223 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L++ P L ++D Y G P+ + AI+L L F+R++ELR W EIDFE +W IP ++ Sbjct: 224 LDILEFPPFLERMDRYHGSPMIKTAIQLMTLTFVRTAELRMMEWDEIDFETKLWRIPADK 283 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 KM H+VPLS QA+ +++Q++ G +F +H + KPMS N + Sbjct: 284 ------------MKMAQPHIVPLSKQAIELIEQLRPLTGNKQYVFY-NHSTAKPMSSNAL 330 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 +R MGY+ K + GHGFR +A ++L E G + DA+E Q++H N+V AY H A+ Sbjct: 331 LCVIRTMGYNGK--MTGHGFRGLASTTLHEQG-YMHDAIEIQLAHRVGNAVSQAYNH-AQ 386 Query: 359 HLEERRLMLQWWADFLDVNRERFISPF 385 HL+ R M+Q W+DF+D R + I PF Sbjct: 387 HLDYRIKMMQEWSDFIDGLRNK-IVPF 412 >UniRef50_Q5R097 Integrase n=2 Tax=Idiomarina RepID=Q5R097_IDILO Length = 436 Score = 261 bits (666), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 157/414 (37%), Positives = 229/414 (55%), Gaps = 48/414 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV G KYWRL+YR+ KQK LALGV+P +TL A+ +A+ +LA+GVDPGD K Sbjct: 34 LRLLVRKQGGKYWRLKYRFNKKQKTLALGVFPNVTLKQAKDATIKAKAMLADGVDPGDTK 93 Query: 61 KNDKVEQSKARTFKEVAIEW--HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + S R + +E+ T + WSEDH RV K LE+ + LG++ I +++ Sbjct: 94 STNTNDNS-LRFYAAKWLEYQSQATARVWSEDHKARVWKRLENGILKKLGDKLITDVRKE 152 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ--HR 176 D+ I+ VE G E A R+ T + Y V ++ + + V ++ HR Sbjct: 153 DVRRLIENVEAKGHHETAKRIADDTQRLFEYVVDQYSLEDDVDIRLLRPVKVISKPVVHR 212 Query: 177 PALELKRIPELLTKIDSY--TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 AL++K +P + + +Y TGR LT AIEL +L F+RS ELR ARW E D + +W+I Sbjct: 213 EALDIKNLPFFMQDLANYTQTGRELTALAIELLILTFVRSGELRGARWEEFDLDNKVWSI 272 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P ER KM+ H VPLS +AL ++K+IK+ G ++L+F + +PMS Sbjct: 273 PAER------------MKMKRPHEVPLSAKALDVIKRIKRITGHYELLFPSETKPDEPMS 320 Query: 295 ENTVNSALRVMGY-----DT-----------------------KVEVCGHGFRTMACSSL 326 +NT+ A+ MGY DT K + HGFRTMA S+L Sbjct: 321 DNTMRQAMFKMGYFPKAKDTKDGKIAKTYLKYQDNAHYPDGRLKEKAVPHGFRTMASSTL 380 Query: 327 VESGLWSR-DAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 ES R DA+ERQ++H+ +N V+ AY HKAE+ +ER M++WW DF++ RE Sbjct: 381 HESDQKFRSDAIERQLAHVEQNKVKDAYSHKAEYWDERVEMMEWWGDFVNEQRE 434 >UniRef50_Q2T016 Site-specific recombinase, phage integrase family n=30 Tax=Bacteria RepID=Q2T016_BURTA Length = 438 Score = 260 bits (664), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 149/381 (39%), Positives = 229/381 (60%), Gaps = 25/381 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V PNGS+YWR++YR++GK+K+ + GVYPE++LA AR ARKLLA G DP ++K Sbjct: 71 LYLQVMPNGSRYWRMKYRFDGKEKLASFGVYPEVSLAQARQACLAARKLLAAGTDPTEQK 130 Query: 61 KNDKVEQS--KARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K ++ + +F+ VA EW + K W+E +A++V+ SLE + F +G + + +++ Sbjct: 131 REIKRARAIEASSSFEAVAREWFESQKDGWTEVYANKVINSLEVDAFPRIGSKPLRDIEA 190 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ--- 174 D+L ++A+E G E A R+ QR+ A+ +Y + +G NPA ++ Q Sbjct: 191 PDMLEIVRAIEARGVRETAKRVLQRSRAVFQYGIMTGRCSRNPAADIDAETVLKKGQGVK 250 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H ++ IP+L+ I +Y+G +T+ A+ L F R++E+ A W E D A+ W I Sbjct: 251 HMARVKPVEIPQLMRDIAAYSGDRVTQLALRFMALTFTRTTEMINAEWDEFDERAAEWRI 310 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD-SHKPM 293 PP+R KMR H+VPLS QAL +L +++ G L+F SH + Sbjct: 311 PPDR------------MKMRDPHIVPLSRQALEVLAALRELNGNQRLVFYSVQGRSH--I 356 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S NT+ AL MGY ++ + GHGFR +A + L E G +SRD V+RQ++H RN V AAY Sbjct: 357 SNNTMLYALYRMGYKSR--MTGHGFRGLAATVLRELG-YSRDVVDRQLAHAERNQVTAAY 413 Query: 354 IHKAEHLEERRLMLQWWADFL 374 +H AE+L ERR M+Q WAD+L Sbjct: 414 VH-AEYLPERRKMMQHWADYL 433 >UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root RepID=A1BGX1_CHLPD Length = 419 Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 152/380 (40%), Positives = 224/380 (58%), Gaps = 22/380 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HLLV +G K WR QYR++GKQK+LALG YPEI+LA+AR RR+EAR LLAN DP + K Sbjct: 31 LHLLVTTSGGKLWRFQYRFDGKQKLLALGQYPEISLANARKRREEARTLLANEQDPSEAK 90 Query: 61 KNDKVEQSK--ARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K ++ A +F+ VA EW G N WS HA V+ LE ++F A+G + ++E+ Sbjct: 91 KAAKKAEALKDASSFELVAREWFGKNDPVWSPGHALTVMCRLEKDVFPAIGSKPVSEITA 150 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ--- 174 D+ + +E G +E A R++ + RYAV +G ++++P+ + R+ Sbjct: 151 SDIRTMLLKIEARGAVETATRIKIMCGQVFRYAVATGRLEHDPSAALKSREIFRKREIRH 210 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H + K + LL ID Y G + + A++LT L+F+R EL+ WS+IDFE ++W+I Sbjct: 211 HAAITDPKELAPLLMAIDEYQGTFVVKSALQLTPLLFVRPGELQNMEWSDIDFEEALWSI 270 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P ER KMR HLVPLS Q+L+IL+ + G +F G +PMS Sbjct: 271 PAER------------MKMRQPHLVPLSRQSLSILQGLHPATGHGRYVFTG--RGSRPMS 316 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 N++N+ALR +GYD+ V GHGFR A + L E + D +E Q++H R+ AY Sbjct: 317 NNSINAALRYLGYDSDT-VTGHGFRATARTILDEVLGFRVDLIEHQLAHAVRDPNGRAY- 374 Query: 355 HKAEHLEERRLMLQWWADFL 374 ++ L++RR M+Q WAD+L Sbjct: 375 NRTSFLDDRRQMMQAWADYL 394 >UniRef50_B1Y3M2 Integrase family protein n=4 Tax=Proteobacteria RepID=B1Y3M2_LEPCP Length = 433 Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 148/391 (37%), Positives = 224/391 (57%), Gaps = 23/391 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P GS +WR +YR+ GK+ ML+LG YP+ +L+ AR RRDEAR+ LA G++P + + Sbjct: 34 LRLDVQPTGSAWWRWRYRFGGKEGMLSLGTYPDTSLSAARGRRDEARERLAAGINPSEAR 93 Query: 61 KNDKVEQSKAR--------------TFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLFA 105 K+DK Q+ TF+ A EWH WSE HA +VL L ++LF Sbjct: 94 KDDKAAQALKAEAARLAAAGLPGPGTFEHAAREWHARMAPSWSEGHAGKVLALLVNDLFP 153 Query: 106 ALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA 165 +G +AEL +LL + +E G +E A R + A+ R+ VQ+G D +P +++ Sbjct: 154 FIGTSALAELTPPELLKHARRIEARGAVETAYRALKAAGAVFRHGVQNGYCDSDPTRDLK 213 Query: 166 GAVASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE 224 GA+ +HR A+ + R+ ELL ID Y G P+ R A+ L L+F+R ELR A W+E Sbjct: 214 GAIVLPVPEHRAAITDPARLGELLRAIDGYQGTPVVRSALALAPLVFLRPGELRKAEWAE 273 Query: 225 IDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI 284 D +A++WTIP R +K + H+VPL+ QA AIL+ ++ GA +F Sbjct: 274 FDLDAAVWTIPAAR-----MKGRLKAKLNGPDHVVPLAPQAAAILRDLQPLTGAGKYVFP 328 Query: 285 GDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM 344 +P+S+N V SALR MG+D K E+ GHGFR A + E +E Q++H+ Sbjct: 329 NPLTPDRPLSDNGVLSALRRMGFD-KDEMTGHGFRATARTIAAERLKIDPVVLEAQLAHV 387 Query: 345 ARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 +++ AY ++ ++L++RR M+ WAD+LD Sbjct: 388 VADALGRAY-NRTQYLDQRRDMMTRWADYLD 417 >UniRef50_C0N6F7 Site-specific recombinase, phage integrase family protein n=2 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6F7_9GAMM Length = 401 Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 150/385 (38%), Positives = 230/385 (59%), Gaps = 21/385 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V GSK WR ++ +EG ++ L+LG YP+I+L +AR +RD+ RK + G+DP ++ Sbjct: 34 LYIEVPLKGSKRWRYKFYFEGTERKLSLGTYPKISLKEARQKRDDIRKKIDAGIDPSYER 93 Query: 61 KNDKVEQS-KARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + ++ S T++EVA EWH NK W++ +A L LE N F +G+R I ++ Sbjct: 94 RKKRLNASVSGNTYEEVAREWHARNKANWTKKYADLTLSRLEQNAFPWIGDRQIDKITAP 153 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 +LL IK V G +E A R+++ + I ++A+ +G+ + NPA + GA + +H A Sbjct: 154 ELLTVIKRVFDRGAIETAHRIRRLSNTIFKFAIANGMTETNPAAALEGAFPTQKVKHHSA 213 Query: 179 L-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + E K++ ELL ID Y+G TR A++L+ L+ R +R A W +ID E S+W I Sbjct: 214 VTEPKKVAELLRAIDGYSGHFATRCALKLSALVMNRPINIRAAEWGDIDLENSVWRI--- 270 Query: 238 REPIPGVKHSHRGS-KMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 H G K R TH++PLS QAL IL++I+ G +F +PMSEN Sbjct: 271 ----------HMGRMKSRRTHIIPLSRQALEILEEIRPLTGEGKYVFPCMRSKARPMSEN 320 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+ +ALR MG+ + E+ HGFR MA + L E G ++ D VERQ++H+ +S R+AY H Sbjct: 321 TICAALRRMGFSGE-EMSAHGFRGMASTLLHEKG-YNSDWVERQLAHID-SSTRSAYNH- 376 Query: 357 AEHLEERRLMLQWWADFLDVNRERF 381 A+HL++R MLQ WAD+LD R F Sbjct: 377 AQHLDDRAKMLQEWADYLDELRINF 401 >UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV41_9DELT Length = 401 Score = 258 bits (658), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 150/382 (39%), Positives = 225/382 (58%), Gaps = 18/382 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP-GDK 59 +++LV+P G K WRL+YR+EGK+++ A+G YP ++L +AR R A++++A GVDP + Sbjct: 28 LYVLVNPGGGKLWRLKYRFEGKERLFAIGTYPAVSLKEARARAVTAKEMIARGVDPCAAR 87 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K +++RTF+ VA EWH W+ +HA ++++ LE F LG R IAEL Sbjct: 88 KAAKAEAIARSRTFEVVAREWHKKKLAGWTPNHARQIIRRLETLAFPDLGSRPIAELGAP 147 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN-RQHRP 177 D LA + VE G LE A RL Q + RYA +G+I +PA + A+ + R H Sbjct: 148 DFLAVLGKVERQGHLETARRLAQICGQVTRYARLAGMIVADPASHLTEALTTKPVRLHAA 207 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 E + I LL ID Y G +A+++ +F+RSSELR A W+EID + + W IP E Sbjct: 208 ITEPREIGALLRAIDDYPGDVSVSFALKIMPYVFVRSSELRRATWAEIDLDRAEWLIPAE 267 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R KMR HLVPL+ Q + + + + G +L+F G + +S+ Sbjct: 268 R------------MKMRRPHLVPLARQVVGMFRALHAITGNRELVFPGTASVTRCISDVG 315 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + +ALR +GY + E+ HGFR+MA + L E G + D +E Q++H RNSVR AY ++A Sbjct: 316 LLNALRRLGYG-RDEMTVHGFRSMASTRLNEMG-YRPDVIEAQLAHAERNSVRDAY-NRA 372 Query: 358 EHLEERRLMLQWWADFLDVNRE 379 +++EERR M+Q WAD+LD R+ Sbjct: 373 QYVEERRRMMQEWADYLDSLRD 394 >UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EQ25_BRASB Length = 407 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 154/383 (40%), Positives = 229/383 (59%), Gaps = 27/383 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HLL+ P+G+KYWRL YR+ GKQ+ LALGVYP + L +AR RD+A++ +A +DP K Sbjct: 26 LHLLITPDGAKYWRLAYRWHGKQRTLALGVYPAVGLIEARASRDDAKRSIAADIDPSIVK 85 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K + + TF+ VA EWH K S +A ++L+ LE + F A+G R+IA L+ Sbjct: 86 RERKRAAKIATGNTFEAVAREWHENWKDARSPYYAAQILRRLEADAFPAIGRRSIAALEP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV-ASCNRQHR 176 +LL ++ VE G E A RL+Q I R+A+ +G +P+ ++ A+ A+ Q Sbjct: 146 PELLDMLRKVEKRGVNETARRLKQLVGQIFRFAIVTGRAKRDPSVDLKDALRATGEPQRH 205 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE---IDFEASIWT 233 A+ L +P L K++SY+G T+ A++L L F+R++ELR +W+E +D +++W Sbjct: 206 RAMPLSELPTFLQKLESYSGEQQTKLALKLVTLTFLRTTELRAGKWNELENLDENSALWR 265 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF--IGDHDSHK 291 IP ER KMR HLVPLS QA+A L++++ G IF G D Sbjct: 266 IPAER------------MKMRLEHLVPLSRQAVAALRELRTLSGGSPNIFPSPGKGDC-- 311 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 MS NT+ AL MGY + HGFR +A + L E+ L++RD +ERQ+SH+ RN VR Sbjct: 312 -MSSNTMLYALYRMGYHGRATT--HGFRAVASTILNETNLFNRDWIERQLSHVERNEVRR 368 Query: 352 AYIHKAEHLEERRLMLQWWADFL 374 AY + AE + +RR M+QWWAD + Sbjct: 369 AY-NAAEWMPDRRRMMQWWADHI 390 >UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli RepID=Q93UI5_ECOLX Length = 401 Score = 257 bits (656), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 151/380 (39%), Positives = 213/380 (56%), Gaps = 23/380 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M+L + +G +YWR++YR+ GK+K+LA GVYP + + +AR + A++ L+ G DPG K Sbjct: 23 MYLQITASGGRYWRMKYRHGGKEKLLAFGVYPLVGIKEARDKLFYAKQALSRGEDPGATK 82 Query: 61 KNDK--VEQSKARTFKEVAIEW--HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 K K EQ A TFK VA +W H + W R SLE +++ LG I+ + Sbjct: 83 KLAKFQAEQDAANTFKAVAEDWLDHQAGR-WEAITLSRTRASLEADVYPTLGSLPISSIT 141 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR--Q 174 R ++ +K +E G E+A R+ QR +I RY I+ N ++ + R Q Sbjct: 142 PRQVMDVVKKIEKRGASEIATRVLQRIKSIFRYGTTHQRIERNTMADLVPSEILKPRRVQ 201 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 HR AL ++PE L K+ SY G P T A+ L +L R E+R ARW EID +A +W I Sbjct: 202 HRAALAPAQLPEFLKKLASYEGEPHTVNALHLLMLTAARPGEVRGARWDEIDLKAKLWRI 261 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 PPER KMR+ H+VPLS++A+A ++ ++ G DL+F KP+S Sbjct: 262 PPER------------MKMRSEHVVPLSSEAVAAIEAMRPLSGNRDLVFPSPFYPSKPLS 309 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 ENT NSA+ MGY K HGFR + + ESG WS DA+ERQ++H RN VRAAY Sbjct: 310 ENTFNSAMARMGY--KYLATAHGFRALFSTVANESG-WSADAIERQLAHAERNQVRAAY- 365 Query: 355 HKAEHLEERRLMLQWWADFL 374 + L ER M+ WWA +L Sbjct: 366 DRGVRLPERVKMMNWWAQYL 385 >UniRef50_Q3SHC8 Probable cp4-like integrase protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHC8_THIDA Length = 425 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 154/384 (40%), Positives = 220/384 (57%), Gaps = 22/384 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV+ G KYWR+ YR+ GK+K LALGVY +++LA AR +RD+AR +LA+G DPG+++ Sbjct: 42 LYLLVNQAG-KYWRMDYRFLGKRKTLALGVYSDVSLARARQKRDDARAMLADGTDPGEQR 100 Query: 61 KNDK--VEQSKARTFKEVAIEWHGT--NKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 K K + ++A +F+ VA EWH +KW++ A + + LE +F +G IA +K Sbjct: 101 KETKRANQAAQANSFEAVAREWHAMKLKRKWTQSTADKTMAQLEAYVFPEMGHLPIASVK 160 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 LLA ++ VE G A RL++ I RY V +G + NPA + GA+ HR Sbjct: 161 ASQLLAMLRKVENRGIAYTAVRLREVCGQIFRYGVATGRAEDNPAAHLLGALHKPEVNHR 220 Query: 177 PALELKR-IPELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 PA+ +R L + TG +TR A LL F+R+ E R+A+W EID++A W + Sbjct: 221 PAITDRRGFGAFLRDLREATGYDAVTRHAAYFALLTFVRAQEFRYAKWEEIDWQAKEWKV 280 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF--IGDHDSHKP 292 P +R + K H VPLS QALA+L ++K G +F + + + Sbjct: 281 PAKR---------MKTGKALPAHTVPLSQQALALLTELKNLTGHSPYLFPKVKGYGDAEV 331 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 +SENTV L MGY + C HGFR A S L E G WSR+A+ERQ+ H +S AA Sbjct: 332 ISENTVGKMLNKMGYQGR--QCVHGFRASARSILSEQG-WSREAMERQLDHKETDSTVAA 388 Query: 353 YIHKAEHLEERRLMLQWWADFLDV 376 Y ++EHL ERR M+Q WAD D Sbjct: 389 YA-RSEHLPERRNMMQAWADTCDA 411 >UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacteria RepID=Q3JN19_BURP1 Length = 462 Score = 254 bits (648), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 142/379 (37%), Positives = 214/379 (56%), Gaps = 19/379 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M LLV PNG KYWRL YRY GKQK LALGVYPE++LA AR RR EAR+ LA G DPG+ K Sbjct: 83 MFLLVQPNGGKYWRLAYRYLGKQKTLALGVYPEVSLALARQRRAEAREQLAKGADPGETK 142 Query: 61 K--NDKVEQSKARTFKEVAIEWHGTNKKWSEDHAH-RVLKSLEDNLFAALGERNIAELKT 117 K + +F+ VA+ W + + E H R L L++++F LG+R IA++ Sbjct: 143 KADRRAARLAADNSFEVVALAWLEERRPYVEPRQHERTLVRLKNDVFPWLGKRPIADIDA 202 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++LA +K ++ G A R++ + Y ++ G NPA + A+ H Sbjct: 203 PEILAVLKRIDSRGARFTAHRIRSEIGRVFVYGIKEGHCKANPAASLVKAIPPAQTTHFA 262 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 ++ E ++ E+L D ++G A++L ++F+R ELR A WS D E + W Sbjct: 263 SITEPAQVGEMLRAFDGFSGTFPVLCALKLAPMLFVRPGELRKAEWSHFDLEKAEW---- 318 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 + +K +T HLVPL+TQA+ ILK++ G+ +F G +PMS+ Sbjct: 319 ----------RYLVTKTKTEHLVPLATQAVKILKELHAVTGSGQYVFPGARSKQRPMSDA 368 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 +N+ALR +GYDT+ E+ GHGFR MA + L E + +E Q++H +++ AY ++ Sbjct: 369 AINAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQLAHTVPDTLGRAY-NR 427 Query: 357 AEHLEERRLMLQWWADFLD 375 + ++ER M+Q WADFLD Sbjct: 428 TKFIKERCAMMQKWADFLD 446 >UniRef50_Q2N8A1 Symbiosis island integrase n=12 Tax=Bacteria RepID=Q2N8A1_ERYLH Length = 409 Score = 250 bits (638), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 155/398 (38%), Positives = 230/398 (57%), Gaps = 24/398 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV G K WR++YR +G++K LA+G YPEI LA+AR RRD AR+ LA G DP +K Sbjct: 26 LFLLVERTGGKLWRMKYRIDGREKKLAIGRYPEIGLAEARRRRDAAREQLAQGKDPSREK 85 Query: 61 KNDKVEQ--SKARTFKEVAIEW-----HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIA 113 + K F +A E+ H ++ W+ A R + L L +++G IA Sbjct: 86 QRQKARAKLGAENNFASLAAEFCEKRKHDGSRAWAPATAKRC-EYLLSVLNSSIGHLPIA 144 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 +++ D+L ++ +E G+LE A R Q ++ RYAV + + +P +++ GA+ + Sbjct: 145 DIEPADILTAVRRIESKGKLESAKRTLQLAGSVFRYAVATARLKSDPTRDLRGALMNPTV 204 Query: 174 QHRPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 H A L+ ELL ID Y G+P+T+ A++L +F+R ELR A WSEIDF+ ++W Sbjct: 205 THYGAVLDPAGAGELLRAIDGYEGQPITKLAMQLAPHVFVRPGELRHAEWSEIDFDEALW 264 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 TIP + +KMR HLVPLS QA+AIL+ + G +F +P Sbjct: 265 TIPASK------------TKMRKDHLVPLSRQAIAILEMAHRLTGPDGYVFPSVRTRKRP 312 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 MS+NT+N+ LR +GY T E+ HGFR MA + L ESG W+ DA+E ++H + VRAA Sbjct: 313 MSDNTINAGLRRLGYATD-EMTAHGFRAMASTLLNESGKWNPDAIEGALAHGDSDKVRAA 371 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRERF-ISPFEYAK 389 Y H+ H +ER M++WW+D+LD RE + P + AK Sbjct: 372 Y-HRGAHWKERVKMMKWWSDYLDQLREGAEVVPIKAAK 408 >UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V414_SPHWW Length = 417 Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 148/400 (37%), Positives = 226/400 (56%), Gaps = 21/400 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L+V P+GSK WRL+YRYEGKQK L LG +P++ +++AR+RR++ARKL+ G DP K Sbjct: 26 LTLVVQPSGSKVWRLKYRYEGKQKTLHLGHWPKVGISEARIRREDARKLIEEGTDPALVK 85 Query: 61 K----NDKVEQSKARTFKEVAIEW-HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + KV+ +F+ VA EW ++ ++ L D + ALG + I + Sbjct: 86 RFGPVAAKVKIVAGNSFRAVAEEWLEKCEREGLSQVTLNKIRWLLDKAYPALGSKPIEVI 145 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + D LA +K +E G LE A RL+ + I R+AV +G I+ + A ++ GA+A+ ++ Sbjct: 146 RPLDALAVLKKLEAEGILESARRLRSVLSRIFRFAVATGRIERDVAADLRGAIATPKGKN 205 Query: 176 RPALELKR-IPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 A+ R LL I++Y+G +T A+E + +F+R ELR A W E+D + +IW I Sbjct: 206 LAAITTAREAGVLLRAIENYSGHEITAIALECSAHLFVRPGELRQAEWPELDADEAIWAI 265 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 PPE+ +KMR H VPLS Q + L ++ G +F + PMS Sbjct: 266 PPEK------------TKMRRPHWVPLSRQMMEKLHRLHDLTGGGKYLFPCLGNDDMPMS 313 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 ENTVN ALR +G+ ++ HGFR MA + L ESG W DA+ERQ++H+ N VR AY Sbjct: 314 ENTVNLALRRLGFGQD-QMTAHGFRAMAATLLNESGQWHPDAIERQLAHIETNEVRRAYT 372 Query: 355 HKAEHLEERRLMLQWWADFL-DVNRERFISPFEYAKINNP 393 + E+ ER M+QWW+D + ++ R + + + P Sbjct: 373 -RGEYWPERVRMMQWWSDHIEELRRAPLVQRGSFGSVPTP 411 >UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MGW9_DIAST Length = 428 Score = 248 bits (633), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 141/395 (35%), Positives = 228/395 (57%), Gaps = 24/395 (6%) Query: 1 MHLLVHPNGSKY-WRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++LL++ NG K+ WR Y+ +GK+K ++LG YP +L+ AR + + AR+L+A G+DP Sbjct: 29 LYLLLYVNGGKHGWRFDYKVQGKRKTISLGTYPATSLSLARAKANAARELVAAGIDPSAD 88 Query: 60 KKNDKVEQSKAR--------------TFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLF 104 +K+ K + K TF+ VA EW + +W+ +A +VL+ LE ++F Sbjct: 89 RKSKKAAEKKVHEDAKLVAAGKPLNGTFEAVAREWFEVRSPEWAAKYAEKVLRRLEADVF 148 Query: 105 AALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM 164 +G R + ++ +LLA ++ +E G +E A R + + I R+AV +GL + A+++ Sbjct: 149 PHIGIRPVGDVTAPELLAVLRRIEDRGVIETAHRAHESCSQIFRFAVGAGLAKGDVARDL 208 Query: 165 AGAVASCNRQHRPALEL-KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWS 223 G + +H PA+ KR+ ELL D Y G + R A+ L ++ +R ELR ARW Sbjct: 209 KGLLRKPRTRHFPAILCPKRLGELLRACDGYVGTHVVRAALSLAPMLLLRPGELRHARWD 268 Query: 224 EIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF 283 EI+ + WTIP ER +K G H+VPL QA+ +L+++ G +L+F Sbjct: 269 EINLNTATWTIPGER-----MKREREGKLNGMPHIVPLPRQAVQVLRELHPITGRGELVF 323 Query: 284 IGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSH 343 G+ H+PMSENTVN+ALR MG+ EV GHGFR A + L E + + +E Q++H Sbjct: 324 RGERHHHRPMSENTVNAALRAMGFGAD-EVTGHGFRATARTLLDERLGIASEIIEAQLAH 382 Query: 344 MARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNR 378 ++S+ AY ++ E+L +RR M+Q WA++L+ R Sbjct: 383 SVKDSLGRAY-NRTEYLVQRRKMMQQWANYLEALR 416 >UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2J0_9DELT Length = 420 Score = 248 bits (633), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 139/381 (36%), Positives = 221/381 (58%), Gaps = 12/381 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKM----LALGVYPEITLADARVRRDEARKLLANGVDP 56 ++L V P+G K+WR +YR+ G+ K+ L+LG YP + L +AR +RDE R+ +A G+DP Sbjct: 26 LYLEVAPSGGKWWRFKYRFPGQGKIQEKRLSLGTYPGVGLKEARAKRDEMRRQIAQGIDP 85 Query: 57 GDKKKNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + +++ + + A +F+ VA WH N W+ H+ R+++ LE ++F LG R + ++ Sbjct: 86 ANLRRSTRGSGALAGSFEAVARLWHRNNSTDWAPSHSTRLIRRLEAHVFPYLGNRPVGDI 145 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 DL+ ++ ++ SG E A R+Q + RYAVQ G +Y+P+ + G + ++ Sbjct: 146 TAPDLMNVLERIKNSGHTETARRIQTICGQVFRYAVQKGFAEYDPSSALKGCLGKTTAKN 205 Query: 176 RPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 + E + LL ID Y G + R A++L L F+RS ELR ARW E D W I Sbjct: 206 MATITEPAEVGRLLQAIDEYPGTQVVRCALQLAPLFFVRSGELRNARWDEFDLVNREWKI 265 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAIL-KQIKQFYGAHDLIFIGDHDSHKPM 293 P ER + + R + + H+VPL+TQA+ IL ++++ G L+F G + + Sbjct: 266 PVERMKMR--QDEKRARQGQVGHIVPLATQAVKILEEELRPLTGRCALVFPGLRSRDRAI 323 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S+ T+ +ALR MGY T E+ HG R MA + L G S +ERQ++H RN +R Y Sbjct: 324 SDATLTNALRRMGY-TGDEMTIHGLRHMASTLLHGLGFQSL-VIERQLAHKDRNRIRGVY 381 Query: 354 IHKAEHLEERRLMLQWWADFL 374 ++A++LEERR M+Q WAD+L Sbjct: 382 -NQADYLEERRRMMQSWADYL 401 >UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea psychrophila RepID=Q6AR70_DESPS Length = 399 Score = 246 bits (629), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 141/381 (37%), Positives = 210/381 (55%), Gaps = 26/381 (6%) Query: 5 VHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDK 64 V +G K W +YR + KQ+M LG YPE++L AR EAR L+ G +P +++ K Sbjct: 28 VTKSGVKRWLYRYRLDDKQQMCVLGRYPELSLEQARKIHREARALVREGCNPARERRRKK 87 Query: 65 VE---------QSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAE 114 E ++++F+ +A+EW NK+ WS H VL SL +N+F+A G + Sbjct: 88 QEVISKEKAERDDRSKSFEYIALEWIENNKESWSPSHQQAVLASLRNNVFSAFGNTPVDT 147 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 + D+L I+A+E G LE+ ++ QRT A+ RYA+Q+G YNPA +M GA+ + + Sbjct: 148 ITPPDVLRTIRAIENRGSLEIVRKVLQRTNAVFRYAIQTGRATYNPAADMQGALKAKTVE 207 Query: 175 HRPALELKRIPELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 H PA+ + +LL I S T+ AI+ T L R E+R ARW E++ + + W Sbjct: 208 HMPAVFDSELAQLLQDISSNQKIHVTTKLAIQFTALTACRGGEVRNARWQEVNLDTNEWH 267 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP ER KMR H+VPLS QALAIL + +G +F D KPM Sbjct: 268 IPAER------------MKMRRAHIVPLSIQALAILHRAGALWGEDGFVFPSIRDRSKPM 315 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S+N + A R MGY K HGFR+ S E ++ + +E+ ++H +N V+ AY Sbjct: 316 SDNAMGKAFRDMGYRGK--ATPHGFRSSFSSMAHEQSGFASEVIEKSLAHEEKNKVKGAY 373 Query: 354 IHKAEHLEERRLMLQWWADFL 374 ++AE+LE+RR +LQWW + L Sbjct: 374 -NRAEYLEQRRELLQWWGEKL 393 >UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KY10_HALNC Length = 427 Score = 245 bits (625), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 143/404 (35%), Positives = 218/404 (53%), Gaps = 40/404 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WRL YR+EGK+K LALG YP++ L ARV RDEAR+L+ANG DP + + Sbjct: 26 LYLFVTPAGGKLWRLDYRFEGKRKTLALGGYPDVNLKQARVYRDEARQLIANGTDPAELR 85 Query: 61 KNDKVEQSKAR---------------------TFKEVAIEWHGTN-KKWSEDHAHRVLKS 98 K +K +++R +F+E+ EW SE + ++V+ Sbjct: 86 KAEKTTITESRREEAEAVKIEAMIQAGEALPGSFEEIGDEWVNMYLADKSEKYRNKVINR 145 Query: 99 LEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSG---L 155 L+ ++ LG +A++ +L ++ +E G +E A R++Q I+RYA+ +G L Sbjct: 146 LKAEVYPYLGRAPVADVTAPMVLKVLQRIEARGIIESAHRVKQNIGQILRYAIATGRREL 205 Query: 156 IDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSS 215 D A A A ++ H E K I LL + Y G P+TR A+ + +F+R Sbjct: 206 FDVTMALNKAIAPMPKDKNHAAPTEPKDIAPLLRIMAGYRGSPITRAALTIAPCVFVRIG 265 Query: 216 ELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF 275 ELR +W++IDFE W + SK H+VPL+ Q +A L +++ Sbjct: 266 ELRHMQWADIDFETFEW--------------RYTASKTGQEHIVPLARQVVAALIELQPL 311 Query: 276 YGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRD 335 G +F G +PMSENTVN AL+ +G DT+ E+ GHGFR MA + L E + + Sbjct: 312 TGHSRYVFTGARSDTRPMSENTVNGALKRLGIDTQTELTGHGFRAMARTVLEEVHNFRPE 371 Query: 336 AVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 +E Q++H R+ + AY ++ +HLE RR M+Q WAD+LD R+ Sbjct: 372 VIELQLAHAVRDPLGRAY-NRTKHLETRRKMMQVWADYLDELRD 414 >UniRef50_A1VQL7 Phage integrase family protein n=2 Tax=Burkholderiales RepID=A1VQL7_POLNA Length = 413 Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 151/381 (39%), Positives = 216/381 (56%), Gaps = 15/381 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M+LLV G KYWR+ YR+ GK+K LALGVYP ++LA+AR RD+ARKLLA +DP K Sbjct: 28 MYLLVTKAG-KYWRMNYRFAGKRKTLALGVYPAVSLAEARQGRDKARKLLAQDIDPSAAK 86 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + D+ + A TF+ VA E+H WSE HA + L+ E LF +G ++ +K Sbjct: 87 QEDRQATATAAANTFEAVAREFHALKAGGWSEGHATKWLRMNELYLFPHIGTLPLSTIKA 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 LLA ++ VE G L A LQ + RY VQ+G + NP ++ GA+ +H Sbjct: 147 PTLLAALRKVEKKGILSTAQDLQAMAGQVFRYGVQTGRCESNPGVDLKGALQPHIAKHFA 206 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A L+ +L ID+YTG+P T A++L+ L F R +R W+ ID + + TIP Sbjct: 207 AILDPVEAGAMLRAIDAYTGQPETLAALKLSALFFQRPGNIRAMEWAWIDLDGQMLTIPA 266 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 + + KH K H VPL+ QAL +LK IKQ G +F G +PMS+ Sbjct: 267 KS--MKSSKHEKANGK---PHTVPLARQALDVLKSIKQLTGHGRYVFPGARTGERPMSDG 321 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVE--SGLWSRDAVERQMSHMARNSVRAAYI 354 T+N+ALR + Y V HGFR MA + + E SG+ +D VE Q+ H + + +AY Sbjct: 322 TINAALRRLDYGNNEHVA-HGFRAMARTMMAERLSGI-PQDMVEAQLGHGKKGPLGSAY- 378 Query: 355 HKAEHLEERRLMLQWWADFLD 375 ++E+L +R+ M+Q WAD+LD Sbjct: 379 DRSEYLPQRQQMMQTWADYLD 399 >UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4I9_9PROT Length = 410 Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 145/383 (37%), Positives = 210/383 (54%), Gaps = 19/383 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV NG KYWRL YR+ KQK LALG+YP+I+LADAR RR++ARKLLAN DP K Sbjct: 26 LFLLVQINGGKYWRLAYRFADKQKTLALGIYPDISLADARERREQARKLLANDTDPSAIK 85 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K ++ + +F +A E H W+E HA + + ++E F +G+R +AE++ Sbjct: 86 KETKRILQTATVNSFSALAKELHKVKAPMWTEGHAKQWMLNMEKYAFPVIGDRPVAEIEP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L+ ++ VE G E RL Q ++ +YA+ G YNPA+ ++ Sbjct: 146 LELVGIMRNVEAQGTFETRDRLLQTISSTFKYAIAIGKAKYNPAEIRLALADRPKVENFA 205 Query: 178 ALELKRIPELLTKIDSYTGRP----LTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 L IP L D Y R + A L LL RSSE+RF++W++ D +A W Sbjct: 206 CLSTDEIPAFLRAFDDYQERGKVSLIAVAAFRLLLLTATRSSEVRFSKWADFDLDAGCWI 265 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP E+ G KH R H VPLS QA+A+L+ + G + +F + + + Sbjct: 266 IPAEQTGRKG-KHGK-----RKPHAVPLSDQAIAVLRDLYPVTGHGEHVFPSRNGMGRVI 319 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESG-LWSRDAVERQMSHMARNSVRAA 352 SENTVN + MGY K GHGFR++A ++L + G W + +E +SH N AA Sbjct: 320 SENTVNKIIETMGY--KGRQTGHGFRSLARTTLGDMGHRW--EVLEAMLSHALENQTAAA 375 Query: 353 YIHKAEHLEERRLMLQWWADFLD 375 Y+ + + EERR ++Q WAD+LD Sbjct: 376 YV-RTTYFEERRGIMQKWADYLD 397 >UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomonas eutropha C91 RepID=Q0AH02_NITEC Length = 393 Score = 241 bits (614), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 145/383 (37%), Positives = 216/383 (56%), Gaps = 29/383 (7%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 LL++P+GSK+WR +Y + K+ ML+LG YPE TLA AR D + +L G++P +K Sbjct: 28 LLIYPDGSKHWRYRYLFNEKESMLSLGKYPETTLAQARSIHDGYKAILKQGINPSTHRKE 87 Query: 63 DKVEQ--SKARTFKEVAIEW--HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 +K + S +F+ VA W H + K +E H L+ +E ++F +G + + L Sbjct: 88 EKRKAIVSVENSFEAVARTWWMHWKHAK-TERHVAYTLRRMEADIFPFIGAKPVNTLTAM 146 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA-----VASCNR 173 + + V+ G L++A R+ +MRYAVQ GL + NPA ++ A N Sbjct: 147 HFIELVYKVQSRGALDIAKRVLTMCGQVMRYAVQHGLSERNPAADIKPADILKKRKKVNH 206 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 + P EL P+LL KI+ Y G+PLTR A++L L FIR+SEL RW EI F+ + W Sbjct: 207 KRIPESEL---PDLLQKINQYDGQPLTRLALQLMTLTFIRTSELIGGRWEEISFDNAEWR 263 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IPPER KMR+ H+VPLS QA+ +L++IK L+F + + K M Sbjct: 264 IPPER------------MKMRSQHIVPLSDQAITVLREIKALNSDPVLLFPSERRNGKTM 311 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S NT+ AL +GY K + GHGFR +A + L E +E Q++H R+ V AAY Sbjct: 312 SNNTIIYALYRIGY--KGRMTGHGFRGLASTVLHEKNF-DHKWIELQLAHAERDEVSAAY 368 Query: 354 IHKAEHLEERRLMLQWWADFLDV 376 H A +LE+RR M+QWW +++++ Sbjct: 369 NH-ALYLEQRRKMMQWWGEYIEM 390 >UniRef50_UPI0000F2F6E4 putative integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=UPI0000F2F6E4 Length = 353 Score = 240 bits (612), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 139/346 (40%), Positives = 204/346 (58%), Gaps = 7/346 (2%) Query: 49 LLANGVDPGDKKKNDKVEQSKARTFKEVAIEW---HGTNKKWSEDHAHRVLKSLEDNLFA 105 ++A GVDP ++ +++ T + V W + K SED ++ L+ E++LF Sbjct: 1 MIAEGVDPKEQLSILLAKKNNVNTLENVVRVWLDAYAVRKPLSEDTKNKQLRKFENHLFP 60 Query: 106 ALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA 165 ++ I ++ RDL + + + A R++ + YAVQ I N A+++ Sbjct: 61 KFKDKAIEQITLRDLKDALNVI-YDHSPDNAQRIRASLIQVYSYAVQHSYIQTNIARDLE 119 Query: 166 GAVASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE 224 S + HR L IP+L+ +I + +G PLT+ + L L F+RSSE+RFARW+E Sbjct: 120 DMDLSARKNHRATFRSLDLIPQLIRRIKADSGNPLTKLCLLLGLHTFLRSSEIRFARWNE 179 Query: 225 IDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI 284 IDFEA IW IPP R I GVKHS RG+KM+ HLVPLS Q++ IL+++ Q+ G D +F Sbjct: 180 IDFEAEIWRIPPRRRLIEGVKHSDRGAKMKEEHLVPLSKQSIEILEKVYQYSGDCDFVFP 239 Query: 285 GDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM 344 ++ +SENT N ALR MGY TK E+ HGFR +A S+L E ++SRDA+E+QMSH Sbjct: 240 SLNNKRIFISENTPNDALRRMGY-TKEEISFHGFRALARSALGEMSIFSRDALEKQMSHQ 298 Query: 345 ARNSVRAAYIHKAEHLEERRLMLQWWADFLD-VNRERFISPFEYAK 389 RN AY H AE+LEER ++Q W+D+L + +ISP EY + Sbjct: 299 ERNETVGAYTHIAEYLEEREKIMQIWSDWLSAIENGDYISPHEYGR 344 >UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae RepID=B9Z434_9NEIS Length = 395 Score = 238 bits (607), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 142/388 (36%), Positives = 217/388 (55%), Gaps = 28/388 (7%) Query: 1 MHLLVHPNGSKYWRLQYRY---EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG 57 ++L + P G+K+WR YRY K + +G YP+++LA+AR R+ R L+ G +P Sbjct: 26 LYLEIRPTGAKFWR--YRYWTSPTKDGIYTIGEYPDVSLAEARAERERVRALVKEGKNPT 83 Query: 58 DKKKNDKVEQSK--ARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 +KK DK+ K A T VA EW N WSE + +V K L+ +L GE I E Sbjct: 84 AEKKLDKLRSQKETATTLAVVAEEWKVVNWPHWSETYRKQVEKHLQRDLLDEYGELPIRE 143 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 + + LLA I ++ G +A ++Q +I R+A+ + D +P + GA+ + Sbjct: 144 VTSAQLLAAISKIDERGAPSIARLVRQWAGSIFRHAIATLRADSDPTYPLRGALRMPPTR 203 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H L +P L +D+Y G LTR A+ L +L +R+ ELR A W+E D +A+ W I Sbjct: 204 HNAHLSADELPGFLKALDAYKGFGLTRLAVNLQMLTLVRTQELRLAEWAEFDLDAAEWRI 263 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF--IGDHDSHKP 292 PPE+ KMR H+VPL QA+AI+++++ G +F + +HD+ Sbjct: 264 PPEK------------MKMRDPHIVPLPKQAVAIMRELEPLTGRRRWVFPNVRNHDTG-- 309 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 M+ T+ + ++GY K GHGFR A + L E G W+ D +ERQ++H+ RN V+AA Sbjct: 310 MTNTTILRVIEILGY--KGRATGHGFRATASTILHEQG-WNTDIIERQLAHLERNKVKAA 366 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRER 380 Y H A +L+ERR MLQ WAD+LD+ R++ Sbjct: 367 YNH-AGYLKERREMLQAWADYLDLQRDK 393 >UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadaceae RepID=B1JDS4_PSEPW Length = 402 Score = 238 bits (606), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 147/377 (38%), Positives = 219/377 (58%), Gaps = 19/377 (5%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 L V G K WRL+YR+EGK KML LG YP +TLA AR RRD ARKLL+ G+DP K+ Sbjct: 28 LEVTTAGGKLWRLRYRFEGKAKMLGLGTYPSVTLAHARERRDAARKLLSQGIDPSAYKQQ 87 Query: 63 DKVEQSKAR-TFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 +K T + +A EW+ N+ +W+ A + L+ LE ++F +G+R AE++ +L Sbjct: 88 EKAAAEAQALTLETLAREWYDYNQPRWAPATASKALQYLESDIFPLIGKRPAAEVQRPEL 147 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-QHRPAL 179 + ++ +E VA +++Q + I R+ + G++ NPA ++ A R +H P + Sbjct: 148 VDLVRKIEQREAFNVARKVRQWLSQIFRFGLAKGVVAGNPATDLDVVAAHAPRTRHHPHV 207 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 +PELL K+++ ++ AI L LL +R ELR A W E D E++ WTIP R Sbjct: 208 SEAELPELLEKLEAAQCDFTSKIAIRLLLLTAVRPGELRLAPWDEFDLESATWTIPAAR- 266 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 K R H+VPL QA+ +L+ + + G + L F G +D +PMSENTVN Sbjct: 267 -----------MKARRPHIVPLPRQAVNLLRALHELTGTYPLAFPGRNDRSRPMSENTVN 315 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 AL MGY+ + GHGFR + +SL G ++RD +ERQ++H ++S+R Y H A + Sbjct: 316 KALSTMGYEGR--QTGHGFRHLLSTSLNTRG-YNRDWIERQLAHGDQDSIRDTYNH-AHY 371 Query: 360 LEERRLMLQWWADFLDV 376 LE+RR M+Q WAD +D Sbjct: 372 LEQRREMMQTWADHVDA 388 >UniRef50_B9NUX0 Site-specific recombinase, phage integrase family n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NUX0_9RHOB Length = 404 Score = 236 bits (603), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 146/381 (38%), Positives = 213/381 (55%), Gaps = 22/381 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++LV PNGSK+W L YR+ GKQK+++ G YP I+L +AR +RD RK L G+DP K Sbjct: 26 LYILVKPNGSKHWHLHYRFLGKQKVMSYGPYPLISLKEAREKRDRDRKFLIEGIDPMVVK 85 Query: 61 KNDKVEQSKAR--TFKEVAIEWHGTNKKWSEDHAHRVLKS---LEDNLFAALGERNIAEL 115 K K+ +A+ F +A E N+ E A + LK L + L + + E+ Sbjct: 86 KERKLASERAQRGRFDILAAELLEKNR--VEGRAEQTLKKKAWLVEMANKDLAKLAVMEI 143 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 D+LA +K E +G LE A+RL+ + RYA+ GL + +P + GA+ + Sbjct: 144 TPSDVLAVLKKQEKAGNLETASRLRTTIGEVFRYAIACGLTENDPTIPLKGALVQKRPRS 203 Query: 176 RPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 R A+ +R+ ELL I++Y+G + + L L+ +R ELRFA+W E D EA WTI Sbjct: 204 RSAITNPERLGELLCSIENYSGYRVVALGLRLLALLHVRPGELRFAKWEEFDLEAGKWTI 263 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P ER KMR H+ PL TQA+ IL+++++ ++ P+S Sbjct: 264 PAER------------MKMRQPHVAPLPTQAIDILRELQRISHPDGMVLPSQRRRIDPLS 311 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 ENT N ALR+MGY +K E+ HGFR + ESG W+ DA+ER ++H+ N VR AY Sbjct: 312 ENTFNKALRMMGY-SKEEMTAHGFRATFSTLANESGEWNPDAIERALAHVDSNEVRRAY- 369 Query: 355 HKAEHLEERRLMLQWWADFLD 375 ++A EER M QWWAD L+ Sbjct: 370 NRAAFWEERVEMAQWWADGLE 390 >UniRef50_Q0C1T8 Site-specific recombinase, phage integrase family n=2 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C1T8_HYPNA Length = 409 Score = 235 bits (600), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 139/371 (37%), Positives = 204/371 (54%), Gaps = 18/371 (4%) Query: 5 VHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDK 64 V PNGSK WR Y+++GKQK++ALG YPEI+LA AR +R EAR LL G+DP + K +K Sbjct: 44 VRPNGSKLWRFAYKFDGKQKLMALGTYPEISLARAREKRAEARALLIEGIDPMQQAKVNK 103 Query: 65 VEQS--KARTFKEVAIEWHGTNKKWSEDHAHRVLKS-LEDNLFAALGERNIAELKTRDLL 121 +E+ TF +A E N++ A KS L A LG+ + ++K +L Sbjct: 104 LERQALTEHTFSAIAAELLDKNRREGLAGATLSKKSWLVGIANADLGDLPVTQIKPTHVL 163 Query: 122 APIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL-E 180 P++ VE G E A RL+ + + RYAV + +++P + GA+ + HRPA+ + Sbjct: 164 VPLRKVESEGNYETARRLRAVISQVFRYAVATARAEHDPTAGLRGALIAPKVTHRPAIVD 223 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 ++ L+ I +Y G T+ ++L L++ R ELR + W E D WTIP R Sbjct: 224 REKFAGLIRSIWAYDGAIETKAGLQLMALLYPRPGELRLSTWGEFDLRKRTWTIPAAR-- 281 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 +KMR H PLS A+ ILK++ G + + KP+SENT+N Sbjct: 282 ----------TKMRREHKKPLSGAAVEILKRLHAVTGHEPYVLVSQLSRGKPISENTLNG 331 Query: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 +LR +GY K E+ HGFR A S L ESG W DA+E +++HM + +R AY H+A + Sbjct: 332 SLRRLGY-AKEEMTSHGFRASASSLLNESGKWHPDAIEAELAHMGADQIRKAY-HRATYW 389 Query: 361 EERRLMLQWWA 371 ++R M WWA Sbjct: 390 DQRVEMADWWA 400 >UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio RepID=B8J055_DESDA Length = 402 Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 137/377 (36%), Positives = 219/377 (58%), Gaps = 18/377 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L G K+WR++YR GK+K L+ G +P+I+L +AR RDEA++ L +DP +K Sbjct: 30 LYLETSVAGGKHWRMKYRVNGKEKRLSFGPWPDISLKEAREMRDEAKRQLRESLDPSAEK 89 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K K EQ+ A TF+++A+E+ + W+ H V L +++ A G + IA + +D Sbjct: 90 KKAKQEQA-APTFRDIALEYVEHQRSVWAASHTRTVEGRLALDVYPAFGAKPIAAVTPQD 148 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +LA ++ +E E A+R+ + I +YAV GL++ +P +++ A+ + A+ Sbjct: 149 ILAMLRKIEERRAFETASRVLGFCSLIFKYAVTLGLVEADPCRDLRPALKPYAKGQLAAI 208 Query: 180 -ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 + K + L+ ID Y G + R A+ + L F R E+R W+EI+FE WTIP E+ Sbjct: 209 TKPKEVGALMRAIDDYKGSVVVRAALLFSALTFCRPGEIRHVEWAEINFEREEWTIPAEK 268 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K RT H VPLS QAL +L I + G+ +F +++P+SEN V Sbjct: 269 ------------MKGRTEHRVPLSRQALEVLHGIMPYTGSAKYVFPTPRSNNRPLSENGV 316 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 SALR MGY TK ++ HGFR+MA + L E G DA+E Q++H + +RA Y ++AE Sbjct: 317 LSALRNMGY-TKEQMTAHGFRSMASTLLNELG-HRPDAIEAQLAHKGADKIRATY-NRAE 373 Query: 359 HLEERRLMLQWWADFLD 375 +++ERR ++Q WAD+L+ Sbjct: 374 YMKERRNLMQAWADYLE 390 >UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholderiales RepID=A1WLK0_VEREI Length = 421 Score = 233 bits (595), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 143/380 (37%), Positives = 215/380 (56%), Gaps = 11/380 (2%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+GSK W +YR++G++K LALGVYP++ L DAR RD+ARK GVDP ++ Sbjct: 27 LYLEVSPSGSKRWFWKYRFDGREKRLALGVYPDVPLKDARTARDDARKQHQRGVDPVLER 86 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +++ TF+ VA E+H T K+ WS ++A R L+ LE ++F LG+ + ++ Sbjct: 87 QLERLSNRSDPEATFEVVAREFHTTKKRSWSLEYARRWLERLEKDIFPWLGKLPLKQISA 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 LL ++ VE G E+ L + RY + +G D N A ++ GA+ +H Sbjct: 147 PMLLQALRRVEARGARELPHSLLEACGQTFRYGIATGRCDRNSAADLRGALRPVLTKHMA 206 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A LE K + EL+ I Y G+ TR A+ L+ L+F R +R W E+D EAS+W IP Sbjct: 207 AILEPKEVRELMLAIRGYDGQLTTRVALYLSALLFQRPGNIRQMEWEEVDLEASMWKIPS 266 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 E+ +K HLVPL+ QA+A+L+ ++ G +F +PMSEN Sbjct: 267 EK-----MKRKKSEKLNGRPHLVPLARQAVAVLRDLQPLTGRGRYVFPAVVSPKRPMSEN 321 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 TV ALR MG+D + HGFR MA + LVE S D +E Q++H + +AY + Sbjct: 322 TVRVALRRMGFDNDT-MTPHGFRAMARTLLVEWLNISSDVIEVQLAHRKSGPLGSAY-DR 379 Query: 357 AEHLEERRLMLQWWADFLDV 376 AE + +R+ M+Q WAD+LD Sbjct: 380 AEFMVQRQTMMQSWADYLDA 399 >UniRef50_C6XEE3 Integrase family protein n=2 Tax=Proteobacteria RepID=C6XEE3_METSD Length = 406 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 138/386 (35%), Positives = 227/386 (58%), Gaps = 29/386 (7%) Query: 1 MHLLVHPNGSKYWRLQY--RYEG---KQKMLALGVYPEITLADARVRRDEARKLLANGVD 55 ++L V+ NG+KYWR +Y EG K+ L+LGVYPE++L DARV + + L+ NG+D Sbjct: 29 LYLWVYANGAKYWRFRYFIHVEGGKKKEMSLSLGVYPEVSLNDARVEARKYQGLVDNGID 88 Query: 56 PGDKKKNDKVEQSKAR---TFKEVAIEWH-GTNKKWSEDHAHRVLKSLEDNLFAALGERN 111 P KK K+ Q+KA TF E+A EW+ W+E HA + + +E NL + ++ Sbjct: 89 PATAKKA-KLLQTKAEAGDTFAEIAREWYRKMMPTWTETHARDIERRIEINLIPFIPQKP 147 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC 171 IAEL+ D L P++ V+ G ++ RL + +YA+ G Y+ + A+ Sbjct: 148 IAELEAVDFLKPLEKVQERGATHLSHRLLINIRQVYKYAIAKGKCKYDVTPGLGNALIPH 207 Query: 172 NRQHRPALELKRIPELLTKIDSY--TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 +++PA+ + +P+L+T I Y G + ++L +++R+ EL F RW E+D+EA Sbjct: 208 VAKNQPAIRPEELPKLMTDIADYHKLGEMKVQLGLQLMAHVWLRTRELTFGRWDELDYEA 267 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 ++W +P ER KM HL+PL+ Q IL++++ + I G + Sbjct: 268 NLWRVPGER------------MKMDRDHLIPLTPQVKVILERLRVLARGSEYILPG-RNH 314 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 P+S NT+ AL +GY ++ + GHGFR++A + L ESG ++ DA+ERQ++H+ N+V Sbjct: 315 LTPVSNNTLLYALYRLGYKSR--MTGHGFRSVASTILNESG-FNADAIERQLAHVPENAV 371 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLD 375 RAAY ++AE+++ERR M+ WW+++LD Sbjct: 372 RAAY-NRAEYIDERRKMMLWWSEYLD 396 >UniRef50_Q167M4 CP4-like integrase, putative n=40 Tax=Alphaproteobacteria RepID=Q167M4_ROSDO Length = 409 Score = 232 bits (591), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 141/381 (37%), Positives = 213/381 (55%), Gaps = 22/381 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++LV PNGSK W+++YR +G++K L++G YP ++L AR RD AR ++ANG DP ++K Sbjct: 40 LYVLVKPNGSKLWQMKYRLDGREKTLSIGAYPAVSLQQARKSRDAARSMIANGEDPSEEK 99 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAA---LGERNIAEL 115 + K ++ +TF+++ + +K+ E + L +L A G++ I + Sbjct: 100 QEQKRLKREASGQTFEKIGGMF--LDKQRKEGKSKATLDKTAYHLKLANHDFGKKPITAI 157 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 +L ++ VE G E A RL+ R ++ RYAV SGL + +P + A+ RQH Sbjct: 158 TAPMILRTLRKVEAKGNYETAHRLRARIGSVFRYAVASGLAETDPTYALRDALIRPTRQH 217 Query: 176 RPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 R A+ + LL +ID + G+ TR A++L L+ R ELR A+WSE D +W I Sbjct: 218 RAAITDPTAFGALLREIDVFDGQVTTRIALQLLALLAQRPGELRHAKWSEFDEADKVWAI 277 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P + KMR H VPL+ QA+ +L +++ G + +F H+PMS Sbjct: 278 PAGK------------MKMRRDHFVPLADQAITLLNELRPLTGESEYLFPSLRSWHRPMS 325 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 ENT+N+ALR MGY + E+ HGFR + ESGLW+ DA+ER ++H RN VR AY Sbjct: 326 ENTMNAALRRMGY-SGDEMTAHGFRATFSTLANESGLWNPDAIERALAHEERNEVRRAYA 384 Query: 355 HKAEHLEERRLMLQWWADFLD 375 A H EER + WWA LD Sbjct: 385 RGA-HWEERVKLSDWWAGRLD 404 >UniRef50_B4X5T7 Site-specific recombinase, phage integrase family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X5T7_9GAMM Length = 398 Score = 230 bits (586), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 141/381 (37%), Positives = 214/381 (56%), Gaps = 23/381 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M L + P G K+WR +YR+ GKQK L+LG YP +L AR +R +AR+LLA+GVDP ++ Sbjct: 29 MFLEISPKGGKWWRFKYRFNGKQKRLSLGTYPSTSLKAARDKRQQARELLASGVDPAQQR 88 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGT---NKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K +K+ A TF VA EW ++KW+ + L++ L LG R I+E+ Sbjct: 89 KTEKLATETALRNTFAGVAEEWAQNKVRSEKWTPTTEKKRRIWLDNGLMPYLGSRPISEI 148 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 T +L ++ + + A RL+ + I +A+ +G D NPA + G +A +H Sbjct: 149 TTAELWGVLQHTQKTSGY-TANRLRGMASEIFNFAMATGRADNNPALPLQGQIAVKKEKH 207 Query: 176 RPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 R A LE + ++L ID T+ A L L+F+R ELR A WSEID + ++W+I Sbjct: 208 RLAILEPDEVGKMLRAIDGCQAAVTTKAAARLAPLVFVRPGELRHAEWSEIDLKKALWSI 267 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E+ KMR +H+VPLS QA+AILK+I+ G+ +F G +P+S Sbjct: 268 PAEK------------MKMRESHVVPLSRQAVAILKEIQPLTGSSGYVFEGTKPG-EPIS 314 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 +NT+N L+ +GY K ++ HG+R +A + L E D +E Q++H R++ AY Sbjct: 315 DNTLNKLLKALGY--KGKMTQHGWRAIARTLLDEVLDVRVDWIEHQLAHSVRDANGRAY- 371 Query: 355 HKAEHLEERRLMLQWWADFLD 375 ++ HLE R M+Q WAD+LD Sbjct: 372 NRTSHLEGRIGMMQLWADYLD 392 >UniRef50_D0W4G5 Site-specific recombinase, phage integrase family n=4 Tax=Neisseria RepID=D0W4G5_NEICI Length = 428 Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 133/384 (34%), Positives = 214/384 (55%), Gaps = 17/384 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L ++ +G K WR + GK+K L++G YP ++LA+AR + AR++LA G DP + K Sbjct: 49 LYLYINTSGGKLWRFDFACNGKRKTLSIGKYPTVSLAEARETAETARRMLAAGQDPSEAK 108 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +K E+ A TF+ +A WH N +W E+HA RVL+ E ++F +G I E++ Sbjct: 109 QQEKEERKAAALNTFESIARRWHTDNLTRWKENHAARVLRYFETDVFPVVGAMPIQEIRV 168 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 + + +V G A ++++ A+ YA L + NPA + + S +RP Sbjct: 169 NHIKTLLDSVMARGVNNTAEKIREWAGAVFDYAALLELTESNPAHVLRRYIPSVPAGNRP 228 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 AL + + E ++ P R A+ L +L+F+R++ELR RW EIDF+A +W IP E Sbjct: 229 ALPREELTEFFCRLLLADIEPQNRIALMLIMLVFVRNTELRGGRWDEIDFDARLWVIPAE 288 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R +KH K H VPL+ L +L ++K G +F +SENT Sbjct: 289 R-----MKHEKTAPK--PPHTVPLADWTLELLAELKAITGDTPYLFPSRTKKDGFISENT 341 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + + MGY K HGFR +A S L E G ++ DA+ERQ++H+ N +RAAY ++A Sbjct: 342 LGKIMNNMGY--KGIATPHGFRALASSVLNEQG-FNPDAIERQLAHVEENRIRAAY-NRA 397 Query: 358 EHLEERRLMLQWWADFLDVNRERF 381 +++ ERR M++W++ +L RER+ Sbjct: 398 DYMTERREMMEWYSGYL---RERY 418 >UniRef50_B1Y106 Integrase family protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y106_LEPCP Length = 429 Score = 228 bits (580), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 143/403 (35%), Positives = 213/403 (52%), Gaps = 38/403 (9%) Query: 8 NGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQ 67 G+ WRL Y + GK+K L+LG YP+ L+ AR + EAR L+A G DP + +K K E+ Sbjct: 43 GGAHGWRLDYTFNGKRKTLSLGTYPDTGLSLARKKAAEARTLVAEGTDPSEHRKGVKEER 102 Query: 68 SKAR------------------TFKEVAIEW-HGTNKKWSEDHAHRVLKSLEDNLFAALG 108 + + + VA +W W+E H + SL+ +F LG Sbjct: 103 ERQHLAGQEAAQRAAAGLAEPGSLEAVAADWLQHRAGAWTEGTRHNIAGSLKRYVFPTLG 162 Query: 109 ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA- 167 R + E+ ++ ++ +E SG E A R+ QR A+ RYAV L+ +P + + Sbjct: 163 RRPVGEIAPGEIRTCVQRIEASGAAETAGRVFQRLRALYRYAVAHELVAADPTYPLKPSE 222 Query: 168 -VASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 + +HRPA+ + P L K+ Y G P R A+ L +L +R ELR A W+EID Sbjct: 223 IFRPRDTKHRPAMSAQEAPAFLRKLADYGGDPTVRNALLLLVLTAVRPGELRAAEWTEID 282 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 A++W IP +H KM+ HLVPLS QALA+L++++ G LIF Sbjct: 283 EAAALWRIP----------AAH--MKMKAEHLVPLSVQALAVLEEMRALTGTQALIFPSP 330 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 +P SENT+NSAL MGY K E HG RT+ +S E+G D +ERQ++H R Sbjct: 331 FYPGRPFSENTMNSALARMGY--KGEATAHGMRTLFSTSANEAGHRG-DVIERQLAHEER 387 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLD-VNRERFISPFEYA 388 + VR AY ++AE++ ERR ++ WW + +D + R + PF+ A Sbjct: 388 DDVRGAY-NRAEYMAERRRLMTWWGERVDSMRRGAEVIPFKAA 429 >UniRef50_B7I6Z3 Site-specific recombinase, phage integrase family n=3 Tax=Moraxellaceae RepID=B7I6Z3_ACIB5 Length = 414 Score = 224 bits (570), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 138/390 (35%), Positives = 216/390 (55%), Gaps = 35/390 (8%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LL+ N +K+WR Y Y K+ + G YPE++LADAR +RDEAR LLA +DP Sbjct: 32 LYLLIDKNQNKFWRFDYSRPYTKKRNTIGFGSYPEVSLADARSKRDEARTLLAQNIDPQV 91 Query: 59 KKKNDKVEQ----SKARTFKEVAIEWHGTNKKWSEDHAHRVL---KSLEDNLFAALGERN 111 ++K +VEQ S+ TF VA EW +D A + K L + + +G++ Sbjct: 92 ERK--RVEQEHINSEKNTFAAVAAEWES-----KQDFAESTIRGHKRLLQVINSNIGKKP 144 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC 171 I ++ ++L + E G+LE A +++ + IMRY V +G + + Q++ GA+ + Sbjct: 145 IDKVTPVEVLNICRIYEKQGKLETAKKVKVKCGQIMRYGVATGRCERDVTQDLRGALKTP 204 Query: 172 NRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 +H AL E ELL ID Y G +T+ A+++ +F+R ELR+A+W +ID E Sbjct: 205 KVKHLSALTESNEFAELLYDIDFYEGTFITQMALKIAPYVFVRPGELRYAKWPDIDLEID 264 Query: 231 IW-TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY----GAHDLIFIG 285 +W PP+ + GV+ HLVP+ Q +L +IK+ G + +F Sbjct: 265 LWRYTPPKTKNKTGVQ-----------HLVPIPRQVKVLLLKIKELTYDPDGESEYVFPS 313 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 KPMSENT+N ALR +GY T +VCGHGFR A + L E + + +E+Q++H Sbjct: 314 MTSKLKPMSENTINQALRRLGY-TSEQVCGHGFRASARTILEEVLNYPIEIIEQQLAHKV 372 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 ++ AY ++ +HLE+RR M+Q WAD+ D Sbjct: 373 KDMHGRAY-NRTKHLEKRREMMQSWADYCD 401 >UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacteria RepID=B1Y4T5_LEPCP Length = 427 Score = 223 bits (569), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 135/359 (37%), Positives = 205/359 (57%), Gaps = 19/359 (5%) Query: 7 PNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVE 66 P+GSK WR +YR+ GK+K+LA+G YP +++A AR + +AR LL G DPG+ +K K Sbjct: 39 PSGSKLWRWKYRHGGKEKLLAIGAYPAVSVAGARREQAKARALLDAGTDPGEARKEAKYA 98 Query: 67 Q--SKARTFKEVAIE-WHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAP 123 + +F+ VA + W G +E +A VL+ LE + F +G + +A L D + Sbjct: 99 KLNEHETSFEAVARQWWAGWKANKTERYAEYVLRRLELDAFPVIGAKPVAGLTAPDFVRM 158 Query: 124 IKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM--AGAVASCNRQHRPALEL 181 K +E G E+A R+ + + +MR+AV GL + NP ++ + ++ + Sbjct: 159 AKKIEARGVGELARRIMETSGQVMRWAVAHGLTERNPTADVKPGDILKPRTVENFARVGA 218 Query: 182 KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPI 241 +P+L+ I++Y G TR A++L L F+R+SEL A+W E D +A+ WTIPP+R Sbjct: 219 AELPDLMRHINAYDGSVFTRLALQLMALTFVRTSELIGAQWQEFDLDAAEWTIPPDRIGR 278 Query: 242 PGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAH-----DLIFIGDHDSHKPMSEN 296 G + R HLVPL+ QALA+L+ ++ GA L+F G+ D +PMS N Sbjct: 279 KGRQGERR------AHLVPLAPQALAVLRLLQSARGADRCRGPALLFPGERDHERPMSNN 332 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T+ AL MGY K+ GHGFR +A ++L E G + D +E Q+SH+ N VRAAY H Sbjct: 333 TMLKALERMGYKGKMT--GHGFRGIASTALNEMG-FRFDVIEAQLSHIEGNRVRAAYNH 388 >UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholderia ambifaria RepID=Q0BEM8_BURCM Length = 414 Score = 221 bits (564), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 135/380 (35%), Positives = 212/380 (55%), Gaps = 22/380 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV P+GSK WR +YR GK+ + A+G YP +L ARV RD+AR+L+ G+ P + Sbjct: 26 LYLLVKPSGSKLWRYKYRIAGKENVFAIGEYPTTSLQAARVARDDARELVKKGLHPSHAR 85 Query: 61 K---NDKVEQSKARTFKEVAIEW-HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 + + ++ + KA TF+ V+ EW K W+E H +L+ LE + + +G R + + Sbjct: 86 QEVLSARINEGKA-TFRAVSDEWLEKKRKTWTERHFGEILRMLEADAYPYIGNRPMRSIT 144 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 D+LA ++ VE G VA +L+Q + + +YAV + D +PA + GAV +H Sbjct: 145 AHDVLALMRRVEKRGSPSVAIKLRQYVSNVFQYAVITLRADTDPASVLRGAVLKPPTEHA 204 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 L + + L ++ Y + T AI L +++F R+ EL ARW EID A+ W +PP Sbjct: 205 RPLSREELKALFRQLPLYKSK-RTTIAIRLLMMLFPRTVELCRARWEEIDLAAAEWRVPP 263 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP--MS 294 E+ K R H+VPL TQA+++L+++++ +G I H + K MS Sbjct: 264 EK------------IKSRRLHIVPLPTQAISLLRELQEIHGNRGYILPILHSNRKRPHMS 311 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 T+N AL M + + GH FR A ++L E G W + VE Q+SH ++ R+ Y Sbjct: 312 RATINRALDSMMPNNPEPITGHDFRATASTNLHEMG-WKDEVVEMQLSHKDKDRTRSTYN 370 Query: 355 HKAEHLEERRLMLQWWADFL 374 H A++L ERR M+Q WAD+L Sbjct: 371 H-AKYLPERREMMQSWADWL 389 >UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacteria RepID=B0RRY6_XANCB Length = 409 Score = 221 bits (562), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 137/382 (35%), Positives = 210/382 (54%), Gaps = 23/382 (6%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LL+ P+G+++WR YR GK+ L+ G YPE++LADAR R EAR+L+A +DPG+ Sbjct: 26 LYLLLRPDGARWWRYDYRRPVTGKRNTLSFGTYPEVSLADARERLAEARRLVAAKIDPGE 85 Query: 59 KKKNDKVEQSKA--RTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++K K A +F+ VA EW +K WS +A ++++ L+ ++F +G IA + Sbjct: 86 QRKAVKAAGEAAAANSFEVVAREWFAKQQKEWSPQYAEKIIRRLQSDIFPWIGSSPIAAI 145 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC-NRQ 174 +LL ++ +E G +E A R Q A+ RYAV++G + +P + GA+ + Sbjct: 146 TAPELLKHLERIEQRGAIETAHRALQTCGAVFRYAVRTGRAEADPTGALKGALTPWRSMP 205 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 A + +L KID T RP+ R A+ L L+F R EL RW+E+D +A W Sbjct: 206 FAAATTSEEATTVLRKIDISTSRPVVRSALRLAPLLFARPGELVRMRWTELDLDAGQW-- 263 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 + +K + TH+ LSTQA+ IL+ + G + +F G D K MS Sbjct: 264 ------------RYFVTKTKRTHIAALSTQAIEILRDLHPLTGRGEFVFPGGRDPRKHMS 311 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 N + A R G + K E HGFR MA + L E G W+ DA+E ++H VR Y Sbjct: 312 GNAILVAARRCGIE-KDESTIHGFRHMASTLLNEMGHWNPDAIESALTHKM-PGVRGIY- 368 Query: 355 HKAEHLEERRLMLQWWADFLDV 376 ++A++L+ERR M+Q WAD LD Sbjct: 369 NQAQYLDERRKMMQSWADNLDT 390 >UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QA94_PSYCK Length = 413 Score = 220 bits (561), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 127/376 (33%), Positives = 211/376 (56%), Gaps = 18/376 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G K W YR++GKQ+ L +G YP ++L +AR R E ++L+A+GV+P D K Sbjct: 32 LQLWVRYTGVKSWISAYRWQGKQQTLTIGTYPVMSLQNARQRNIEIKRLIADGVNPKDHK 91 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K + Q F +A W+ K + +E R + ++ ++G++NI ++ D Sbjct: 92 KEQQASQDGLNIFDNIAQSWYAERKTYLAESTFTRNYSAYMRDVKPSIGQKNINDITAPD 151 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +LA KAVE G E+A R + I ++A+++GL +NPA ++A A+ + + Sbjct: 152 ILAIGKAVESRGANEMARRTIREVGQIFKHAIRNGLATHNPATDLAEAIKPHKTTNHHRI 211 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 +++P+LLT I++Y G L + + F+R++E+RF WSEID++ +W IP ++ Sbjct: 212 TSQQLPKLLTDINAYQGDVLVKLGLWFLCYTFVRTNEIRFMEWSEIDYKHGLWRIPADK- 270 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 K + H+VPL+ QA+AIL+QIK+ G D + + KP S++ Sbjct: 271 -----------MKAKRLHIVPLAPQAMAILEQIKEL-GFSDQYVFFNTSTRKPYSQSAFI 318 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 +AL MGY K ++ GHGFR +A ++L E +A+E Q++H N + AAY + A+H Sbjct: 319 NALWNMGY--KGKMTGHGFRGLASTTLHEKEF-MHEAIELQLAHDRENKISAAY-NGAQH 374 Query: 360 LEERRLMLQWWADFLD 375 L R M+ WA+F+D Sbjct: 375 LPYRIDMMHQWANFID 390 >UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepID=C9NQJ4_9VIBR Length = 415 Score = 220 bits (560), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 131/380 (34%), Positives = 205/380 (53%), Gaps = 21/380 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKM--LALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L + PNGSK+W L Y +K L+LG YP+++LA+AR EA++LLA G+DP + Sbjct: 31 LRLRIKPNGSKHWILNYYRPSNRKRANLSLGKYPDLSLANARKMTLEAKELLAQGIDPQE 90 Query: 59 KKKNDKVEQ--SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++K ++EQ + TF V +W K + D+A + +SLE ++F L + + ++ Sbjct: 91 ERKRHQLEQKANHEHTFINVTTKWFEIKKDDVTPDYAVDIWRSLELHIFPQLSDVPVRDI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 ++ +K +E G LE RL QR +M YA GL+ NP + A +++ Sbjct: 151 TAPQVIELLKPIEAKGSLETVKRLAQRLNEVMNYATNCGLVQANPLTGIKAAFKKPKKEN 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 AL +PEL+ I + + + TR IE L R SE ARW EID++ +WTIP Sbjct: 211 MAALTPAELPELMGAIANASIKRTTRCLIEWQLHTMTRPSEASGARWEEIDWDEKVWTIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 PER K R H +PL+ Q L +L+ IK G + IF D D KP + Sbjct: 271 PER------------MKKRREHRIPLTEQMLELLEVIKPISGHREFIFPSDRDPKKPCNS 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T N AL+ MG+ + + HG R++A ++L E G + D +E ++H N VR+AY + Sbjct: 319 QTANMALKRMGFAGR--LVSHGLRSLASTTLNEQG-FEPDLIEAALAHADDNQVRSAY-N 374 Query: 356 KAEHLEERRLMLQWWADFLD 375 + ++LE RR M+ WW+ ++ Sbjct: 375 RTDYLERRRPMMCWWSGHIE 394 >UniRef50_C6RSU9 Phage integrase family protein n=3 Tax=Acinetobacter RepID=C6RSU9_ACIRA Length = 426 Score = 220 bits (560), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 134/389 (34%), Positives = 220/389 (56%), Gaps = 20/389 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LL+ NG+ WR Y K+ + +G YP ++LA AR RD+ R LLA G DP Sbjct: 40 LNLLIRKNGTVMWRFDYTRPVSKKRNTMTVGNYPAMSLAKAREYRDQFRALLAEGKDPQV 99 Query: 59 KKKN--DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 +K+ +K + TFK VA E + + ++ +E R + + L+ +G I+++ Sbjct: 100 EKQGVEEKERLKQQATFKSVA-ELYKSKQRLAEATVKRN-DGIFEKLYRDVGNMPISDIT 157 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 RDL I+ E G +E A R++ + + + R+AV+ GL + + AQ++AG + + H Sbjct: 158 PRDLAKVIEKDENKGHIESAMRIRSKASQVFRFAVKMGLCERDVAQDLAGTITQREKNHY 217 Query: 177 PAL-ELKRIPELLTKIDSYTGRPL-TRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 AL + LL ID Y + + + A++L L+F+R ELR A+WS+I+FE + W+ Sbjct: 218 SALTDPFDFACLLFDIDHYESQLVHVKLALQLAPLVFVRIGELRNAKWSDINFETATWSY 277 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P S +K H+VPLSTQA+AILK+ F D +F D H+P+S Sbjct: 278 TP----------SKTSAKTGLDHIVPLSTQAIAILKEALNFTNNSDFVFPSRSDKHRPIS 327 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 + ++N ALR MGY K ++ GHGFR +A + L E + D +E+Q++H R+ AY Sbjct: 328 DMSINMALRRMGY-GKEDMTGHGFRAIARTLLDEVLEFPLDIIEQQLAHQVRDMHGRAY- 385 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFIS 383 ++ +HL++RR+M+Q W+D+ D + +FI+ Sbjct: 386 NRTKHLDKRRVMMQRWSDYCDELKAQFIA 414 >UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIW0_9NEIS Length = 394 Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 136/381 (35%), Positives = 213/381 (55%), Gaps = 23/381 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD-K 59 ++L + G +YWR++Y Y KQ LG+YP + L AR+ RD+ + LL+ G++P + Sbjct: 27 LYLQIDAKGRRYWRIKYTYNQKQHTQHLGIYPAMPLKAARMERDKIKLLLSQGINPKTHQ 86 Query: 60 KKNDKVEQSK-ARTFKEVAIEWHGTNKK---WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++ + EQ + TF+ VA +WH T + W HA RVL+ +E L LG +IA++ Sbjct: 87 EQQQRAEQKRITNTFEHVARKWHTTKAEKGDWKPAHATRVLRQIELYLIPPLGSLSIADI 146 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ- 174 + D+L I+ VE +G++ A ++ AI +A + L YN A E+ + Sbjct: 147 EPLDILHAIQNVEHTGKIATANKVYDIAHAIFSFAARMKLCPYNAAAELKPELQQAKATP 206 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 +R + + LL ID YTG P + ++L L+F R SELR +W++IDF+A+ + Sbjct: 207 YRHVTDTGELTALLQAIDGYTGSPQVKVLLQLAPLVFARPSELRLLKWADIDFQAACYH- 265 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 K +H K H+VPLS QALA+L +K G ++ +F + + KP+S Sbjct: 266 ----------KAAHE-MKNGIAHIVPLSRQALALLSSLKPVTGHYEYVF-HNKAAGKPLS 313 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 E AL +G+ KV + HGFR A S+L+ +S D +ERQ++H N+ RA+Y Sbjct: 314 EAAARKALSRIGWLDKVTL--HGFRHTA-STLLHEQQYSSDWIERQLAHKDPNTTRASY- 369 Query: 355 HKAEHLEERRLMLQWWADFLD 375 + A+HLE+RR M+Q WADFLD Sbjct: 370 NFAKHLEQRRQMMQEWADFLD 390 >UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8U1_ACAM1 Length = 399 Score = 219 bits (557), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 134/381 (35%), Positives = 210/381 (55%), Gaps = 22/381 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + P G K+W+ +YR +GK+ ++G YPE+ L +AR + EAR+L+A G++P + Sbjct: 29 LFLQITPAGGKHWKYRYRIQGKESTFSIGSYPELGLGEARAKHLEARRLVAQGLNPTTEA 88 Query: 61 KNDK--VEQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K + ++ ++ TF+ VA EW N WSE + V L +L +LG R + E+ Sbjct: 89 KRLQLSLQLAQGNTFEFVADEWFSQKNAGWSESYRGIVRNRLNRDLNPSLGPRPVTEITA 148 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++LA I+AVE G +A + ++ YAV +G D N ++ GA+A + +HR Sbjct: 149 PEVLAVIRAVEARGANALAHKCLSIVRMVLGYAVATGRCDRNVVNDLGGALAPVDAKHRA 208 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ + KR+ EL+ I Y G + R A+ + L F+R ELR +WS+I++ W Sbjct: 209 AITDPKRVGELMRMIADYRGSMVVRAAMRMGALTFVRPGELRTMQWSQINWNTKEWRF-- 266 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILK--QIKQFYGAHDLIFIGDHDSHKPMS 294 + SK T H+VPL+TQA+ IL+ Q+ G +F + + MS Sbjct: 267 ------------QVSKTETDHIVPLATQAIEILQTLQLITGNGTSRYVFPSANSMTRHMS 314 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 N V +ALR MG TK E+ GHGFR MA + + E + + +E Q++H R + AY Sbjct: 315 NNAVLAALRAMGI-TKDEMSGHGFRAMARTLIAEELHYRPELIEHQLAHAVRGPLGRAY- 372 Query: 355 HKAEHLEERRLMLQWWADFLD 375 ++ E LEERR M+Q WAD+LD Sbjct: 373 NRTEFLEERREMMQAWADYLD 393 >UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola DG893 RepID=A6F4S5_9ALTE Length = 437 Score = 218 bits (556), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 140/388 (36%), Positives = 205/388 (52%), Gaps = 29/388 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + P+GSK+WR +YR GK M +G YP IT+++AR RD A+K +ANG P + K Sbjct: 25 LALEIRPSGSKFWRYRYRLHGKAGMYTVGEYPTITISEARAIRDWAKKCVANGEAPAEVK 84 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K + E+ +A T +EV EW NK WS + +V + LE +++ LG++ I ++ Sbjct: 85 KRELAERRAEQANTLEEVGKEWIARNKAGWSVYYHRQVTRMLEADIWPNLGKKGIRDITP 144 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LA ++ VE VA L+Q AI R+A+ + D +P + GA+ +H+P Sbjct: 145 AQMLAELQRVEERAPT-VAVNLKQWLAAIYRHAIATLRADNDPTAPLRGAIKKPKAKHKP 203 Query: 178 ALELKRIPELLTKI---DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS--IW 232 + L +L I + +T AI L L R+ E+R ARW + D E+ W Sbjct: 204 SYNLDEFGKLCRAIWPKEGAIAYRITEIAIRLLALTMARTVEVRSARWDQFDLESEEPTW 263 Query: 233 TIPPEREPIPGVKHSHRGSKMR--TTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 TIP G KM+ THLVPLS+QA+ +L++++ G F Sbjct: 264 TIP--------------GEKMKRGVTHLVPLSSQAVELLRELEGLTGNRPYCFPNLRQPT 309 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 +PMS T+N L +GY GH FRT A + L G D VERQ++H N R Sbjct: 310 EPMSATTINRVLERLGYGGL--FSGHAFRTTASTLLNNYGF-DGDWVERQLAHTEENKSR 366 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDVNR 378 A+Y H AE+L +RR+MLQWWAD +D R Sbjct: 367 ASYNH-AEYLYQRRIMLQWWADLVDTLR 393 >UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobacteria RepID=B8GNQ7_THISH Length = 422 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 133/381 (34%), Positives = 208/381 (54%), Gaps = 25/381 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P+GSK WR +YR GK + A+G YP+++L AR RD AR+L+ GV P +K Sbjct: 29 LFLYVTPSGSKLWRYRYRLGGKPAIYAIGKYPQVSLEAARTERDRARELVKKGVHPVVEK 88 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + Q TF+ VA W +N +WSE +A +V ++LE+++F +G+ ++ ++T Sbjct: 89 RVNISTQLEKNENTFEPVARRWMASNVQWSEGYADQVKRTLENDVFPKVGKLPVSSIRTA 148 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 L IK V G VA ++Q + I YA L D +P + +V +H P Sbjct: 149 HLRPVIKDVAERGAPTVAILIRQLCSQIFAYAAGEELCDSDPTALLKRSVKRPRVRHHPP 208 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L + IP+ L+++D G +T A+ L L ++R++ELR A WSE D ++++WT+P R Sbjct: 209 LPWQEIPKFLSRVDD-AGYRVTVIALRLMALTYVRTAELRKAHWSEFDLDSAMWTVPAGR 267 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 KMR H+VPLS QA+ +LK++ G ++F G MS T+ Sbjct: 268 ------------MKMRDPHIVPLSKQAIVLLKELHTLTGGGKVLFPGFRKPGTVMSATTL 315 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWS--RDAVERQMSHMAR--NSVRAAYI 354 N L MGY + HGFR+ A + L GL S + V+ Q++H R +S RA Y Sbjct: 316 NKVLERMGYGG--QFSSHGFRSTATTLL---GLLSYPENRVDLQLAHSKRKKDSSRAPYD 370 Query: 355 HKAEHLEERRLMLQWWADFLD 375 H +++ R++++Q WAD LD Sbjct: 371 H-TKYIASRKIIMQDWADILD 390 >UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobacteria RepID=A1WW57_HALHL Length = 412 Score = 218 bits (554), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 132/383 (34%), Positives = 207/383 (54%), Gaps = 23/383 (6%) Query: 3 LLVHPNGSKYWRLQYRY-EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKK 61 LLV NG K W+ +YR G++ + LGVYP++ L+ AR RRDEAR LLA+G+DP D++K Sbjct: 35 LLVKSNGGKQWQFRYRRPSGREATMGLGVYPDVPLSKARERRDEARALLADGIDPIDQRK 94 Query: 62 NDKVEQSKART--FKEVAIEWHGT--NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + + A T F+ VA EW K HA+R L+ LE F LG R ++ ++ Sbjct: 95 AQRSAAASADTHSFEAVAREWWDAVHRHKVVASHANRNLRRLEQYAFPKLGRRPVSAIEP 154 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 D+L ++ +E +E A R++ + RYA+ +G +P ++ G + S +H P Sbjct: 155 PDVLEALRRIEALEHVETAHRVKTLIGQVCRYAIATGRGSRDPTADLRGMLRSPKTRHLP 214 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ E + LL ID Y G+P TR A++L ++F R ELR A W D + W P Sbjct: 215 AITEPAELGPLLRAIDGYRGQPTTRAALQLAPIVFCRPGELRAAEWQAFDLSSGTWDYQP 274 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ++ P V PL QA++IL++++ + +F +P+S+N Sbjct: 275 SKDGDPLV--------------TPLPRQAISILRELEPISRSSRYLFPSGRTPDRPISDN 320 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+ +AL+ + Y + + HGFR A + LVE W + VE Q+ H R++ AY ++ Sbjct: 321 TLTAALKRLDYGGR--MVAHGFRAAARTILVERLGWGIEIVEMQLGHRVRDAHGRAY-NR 377 Query: 357 AEHLEERRLMLQWWADFLDVNRE 379 + +E+R +MLQ WAD+LD RE Sbjct: 378 TQWIEQRGVMLQQWADYLDELRE 400 >UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteobacteria RepID=INTA_ECOLI Length = 413 Score = 218 bits (554), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 133/379 (35%), Positives = 209/379 (55%), Gaps = 21/379 (5%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKM-LALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + LL+ +GSK W+ +Y R KQ+ + G YP ++L+DAR R E++ LLA +DP + Sbjct: 31 LTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPAVSLSDARKLRAESKVLLAKDIDPQE 90 Query: 59 KKKND--KVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 +K +++K TF VA W K +ED+A + +SLE ++F A+G+ +I E+ Sbjct: 91 HQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTEDYADDIWRSLERDIFPAIGDISITEI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 K L+ ++ V+ G LE RL QR +M YA +GLID P+ + A +++ Sbjct: 151 KAHTLVKAVQPVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKN 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 P++ ++P+L+ + + + TR LL R +E ARW EIDF AS W IP Sbjct: 211 MPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLLTITRPAEAAEARWDEIDFNASEWKIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R KM H VPLS ALAIL+ +K G + IF ++PM+ Sbjct: 271 AAR------------MKMNRDHTVPLSDGALAILEMMKPLSGGREFIFPSRIKPNQPMNS 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 TVN+AL+ G + HG R++A ++L E G + D +E ++H+ +N VR AY + Sbjct: 319 QTVNAALKRAGLGGV--LVSHGLRSIASTALNEEG-FPPDVIEAALAHVDKNEVRRAY-N 374 Query: 356 KAEHLEERRLMLQWWADFL 374 ++++LE+RR M+QWWAD + Sbjct: 375 RSDYLEQRRPMMQWWADLV 393 >UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K287_PSEFS Length = 401 Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 136/379 (35%), Positives = 204/379 (53%), Gaps = 11/379 (2%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V PNG +YWRL+YR+ GK+K LALGVYPE+ L +AR +RD+AR LA+G DP ++ Sbjct: 26 LYLEVQPNGGRYWRLKYRFLGKEKRLALGVYPEVGLQEARRKRDDARVQLASGQDPSLQR 85 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + KV + TF+ VA +W + W ++ V + LE N F LG+ I+ + T Sbjct: 86 RMAKVVSQLDHQHTFESVATQWLNIRESSWDPEYTRTVRQRLELNAFPWLGKLPISSIST 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 L+ ++ + G E A R+ Q I +A +G+ N ++ + + +H Sbjct: 146 PMLVENLQRIIKRGARETARRVAQIYKQIFEFAEAAGITPPNQIGNLSRTLPAKRVKHFA 205 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ + +++ LL +DSY G A++L L+F R +LR WSE++ +A W IP Sbjct: 206 AVTDPEKLGALLKALDSYAGTMPVCCALKLAPLLFCRPGDLRHMEWSEVNLDAGEWLIPG 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 + +K + R HLVPLS QA+A+L ++K G H F +PMS N Sbjct: 266 HK-----MKGLTATKQDRPDHLVPLSQQAIAVLHELKPLTGRHRYAFPSARGGDRPMSNN 320 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 V SALR M E+ GHGFR A + E + D +E Q++H +N + AY + Sbjct: 321 AVLSALRRMDISGD-EMTGHGFRATARTIGAEVLGFRPDLLEHQLAHTVKNPLGRAY-DR 378 Query: 357 AEHLEERRLMLQWWADFLD 375 L ERR M+Q WADFLD Sbjct: 379 TSFLPERREMMQIWADFLD 397 >UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepID=Q1Q875_PSYCK Length = 452 Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 133/391 (34%), Positives = 213/391 (54%), Gaps = 32/391 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV +G++ W YR++GKQ+ LG YP++ LA+ARV + + L+ANG++P +KK Sbjct: 30 LQLLVRSSGTRTWVSAYRFDGKQQKTTLGTYPQMGLAEARVANADIKALVANGINPKNKK 89 Query: 61 KNDKVEQSKARTFKEVAIEW------HGTNKKWSEDH--AHR-VLKSLEDNLFAALGERN 111 + DK+ +A+TF + A+EW + + + +D+ H+ V+ S E AL + Sbjct: 90 RQDKLANEQAKTFNDYAVEWLEERERNVKPRTYQQDYNRMHKDVIPSFEG---IALKDVT 146 Query: 112 IAELK-TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 + K D + E + EV R I+R A++ LI+ N + Sbjct: 147 FEDCKLMADNIESRTNNEGASPREVTRRTIDLVGNILRRAMRERLIEVNHTDGLKELYPK 206 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 +H +EL +P+LL I+ Y G TR ++ F R+ ELR +W IDF Sbjct: 207 AKTKHMKHVELSELPKLLQDIEGYHGHDQTRLGMKFLAYSFCRTIELRMMKWEHIDFPNR 266 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS- 289 +W + + K+ H+VPLS Q LA+L+++K G ++ +F H Sbjct: 267 LWRVDID------------NLKIARKHVVPLSDQMLAVLEEMKHITGQYEYVFY--HTGM 312 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 H+P SE +N+AL ++GY K GHGFR +A ++L E G + DA+E+QM+H ++S+ Sbjct: 313 HQPYSEEFINNALDILGYGGK--QTGHGFRHIASTNLNELG-YMGDAIEKQMAHDKKSSI 369 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 RA Y H A+HLEERR ++Q WADFLD+ R++ Sbjct: 370 RAVYNH-AQHLEERRKIMQVWADFLDLLRDK 399 >UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL52_9BACT Length = 378 Score = 213 bits (543), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 132/376 (35%), Positives = 208/376 (55%), Gaps = 32/376 (8%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 L + P G K W+++++ +G++ LG YP+I+L +AR++RDE R L N + Sbjct: 28 LEITPAGKKTWKVRFKAQGREIKHTLGRYPDISLKEARLKRDEIRLELVN---------H 78 Query: 63 DKVEQSKARTFKEVAIEWHGTNKKWSEDHAH-RVLKSLEDNL-FAALGERNIAELKTRDL 120 V + TFK +A EW H H R ++S D L LG++ A++ +L Sbjct: 79 KSVPEG---TFKALAEEWFERQVVPVRTHGHARTIRSRLDRLILPYLGDKPPADIDAPEL 135 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL- 179 LA ++ +E G +E A R+ Q ++RY + +G ++ ++ GA+ +H P L Sbjct: 136 LAILRRIEDQGHVETAHRVSQIVGQVLRYGIATGQARHDITADLKGALIPRKPEHFPTLT 195 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 + K+I L+ I +++G + R A+ + +R E+R A W EID +W IP ER Sbjct: 196 DPKKIGGLMRAIQAFSGSVVVRCAMLFQIYTAVRPGEMRKAEWKEID--GDLWKIPAER- 252 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 K R HLVPLS+QA+ +L++I+ G +LIF +P+S+ TVN Sbjct: 253 -----------MKKRRPHLVPLSSQAIGVLEEIRPLTGGGELIFPSVRSKTRPISDMTVN 301 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 +ALR MGY + E+ GHGFR M S++ W + +E Q++H+ +NSVRAAY H AE Sbjct: 302 AALRRMGY-AQNELTGHGFRAM-FSTIANECQWPSNVIELQLAHVDKNSVRAAYNH-AEL 358 Query: 360 LEERRLMLQWWADFLD 375 L++RR +LQWW D+LD Sbjct: 359 LDKRRELLQWWGDWLD 374 >UniRef50_C8UI65 Putative integrase n=1 Tax=Escherichia coli O111:H- str. 11128 RepID=C8UI65_ECO1A Length = 352 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 106/262 (40%), Positives = 161/262 (61%), Gaps = 15/262 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV PNG KYWRL+YR GK+K+LALGVYPE+TLADAR +R++A++ +A G+DP + K Sbjct: 26 LYLLVKPNGGKYWRLKYRVAGKEKLLALGVYPEVTLADARAKREDAKRGIAGGIDPMEAK 85 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +K+ E TFK++A+EWH + KKWS +A +L++ ++F +G++ IAE+K Sbjct: 86 REEKIARETQLNNTFKDIALEWHSSKLKKWSAGYASDILEAFNKDVFPYIGKKPIAEIKP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LL ++ +E G E A +++QR + RYA+ +G +YNPA ++ A+ H P Sbjct: 146 LELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIVTGRAEYNPAPDLTSAMQGHESNHYP 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L K +P+ + SY+G L A L ++ +R+ ELR A W EIDF +IW IP Sbjct: 206 FLTAKELPDFFKALSSYSGSALVVMAARLLIITGLRTGELRGALWDEIDFNKAIWEIPAS 265 Query: 238 REPIPGVKHSHRGSKMRTTHLV 259 R KMR H+V Sbjct: 266 R------------MKMRRPHIV 275 >UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammaproteobacteria RepID=A7ZQ61_ECO24 Length = 436 Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 128/382 (33%), Positives = 204/382 (53%), Gaps = 22/382 (5%) Query: 9 GSKYWRLQYRY--EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG--DKKKNDK 64 G K W +Y K+ ++LG YP +TLA AR RDE LL NG+DP + +K + Sbjct: 69 GKKNWYFRYAVPVTKKRTKVSLGTYPHLTLAKARALRDEYLSLLTNGIDPQVHNNQKANA 128 Query: 65 VEQSKARTFKEVAIEWHGTNKKWS---EDHAHRVLKSLEDNLFAALGERNIAELKTRDLL 121 ++ + TF+ VA +W K S +DHA+ + +SLE N+F+ LG+ I E++ + L Sbjct: 129 LKDATEHTFQAVAKKWLDEKVKTSGISQDHANDIWRSLERNIFSTLGDTPIKEIRPKMLK 188 Query: 122 APIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALEL 181 ++ +E G LE R+ R I RYA LI++NPA + + +Q+ PAL Sbjct: 189 QHLEPIEKRGVLETLRRIISRLNEIFRYAATEELIEFNPADNLGQRFSKPKKQNMPALPP 248 Query: 182 KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPI 241 +P L +++ + R TR IE LL ++R E RWS+ID E +W IP E Sbjct: 249 SELPRFLVALNNASIRLETRLLIEWQLLTWVRPGEAVRTRWSDIDIETGMWNIPAE---- 304 Query: 242 PGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSA 301 KM+ H VPLS +AL +L +K G + +F M E T N+A Sbjct: 305 --------FMKMKKPHKVPLSKEALRVLDLMKVISGHREWVFPSIKAPLNHMHEQTANAA 356 Query: 302 LRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLE 361 + MG+ E+ HG R++A ++ ESG + D +E ++H ++ + AAY ++AE+L Sbjct: 357 IIRMGFGG--ELVAHGMRSIARTAAEESGKFRTDVLEAALAHSKKDEIIAAY-NRAEYLT 413 Query: 362 ERRLMLQWWADFLDVNRERFIS 383 ER +++QWW+D++ + + I+ Sbjct: 414 ERVVLMQWWSDYVSSQKCKVIA 435 >UniRef50_B7MX56 Integrase from prophage n=96 Tax=Gammaproteobacteria RepID=B7MX56_ECO81 Length = 419 Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 127/383 (33%), Positives = 202/383 (52%), Gaps = 26/383 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQK--MLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + LLV P+GSK WR Y +K +L+ G +++LADAR RR E R L++ G DP D Sbjct: 37 LFLLVKPSGSKLWRFSYYRPSDKKRILLSFGSLEDVSLADARKRRSEYRTLISAGTDPQD 96 Query: 59 --KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLK----SLEDNLFAALGERNI 112 ++K + + + TF+ VA W+ K S++ A +K SL+ +F +G I Sbjct: 97 HERQKRETEARRQGNTFENVAAAWYQV--KISQNLAPNTIKDIWRSLDKYVFPFIGNTPI 154 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 L R + + ++ G LE R+ QR +M YA SGLID NPA + A S Sbjct: 155 DTLTARRFVEVLTPIKERGNLETLKRVLQRVNEVMDYAANSGLIDANPAMNVRKAFPSPV 214 Query: 173 RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 ++H P + +++PEL+ + TR IE LL R +E RW EI+ +A W Sbjct: 215 KKHMPTIRPEQLPELMQALSVSATERQTRLLIEWQLLTVTRPAEASSTRWDEINLDAKQW 274 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 TIP R KMR H++PLS QA+A+L+ +K + +F D +P Sbjct: 275 TIPAGR------------MKMRRDHVIPLSGQAMAVLEAMKPISHHRNYVFPSLKDPQQP 322 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 M+ T N+ALR MG+ + HG R + ++ E G + D +E ++H+ N VR A Sbjct: 323 MNSQTANAALRRMGFAGV--LVSHGLRAIFSTAANEEG-FEPDVIEAALAHVDTNEVRRA 379 Query: 353 YIHKAEHLEERRLMLQWWADFLD 375 Y +++ ++E+R ++++WW +F++ Sbjct: 380 Y-NRSNYIEKRIVLMRWWGEFVE 401 >UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIX3_RHOVA Length = 392 Score = 209 bits (533), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 138/384 (35%), Positives = 213/384 (55%), Gaps = 21/384 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV PNGSK WRL YR+ GK K LA+G YP+I L+ AR +R EAR+LLA GVDP +K Sbjct: 26 LYLLVRPNGSKLWRLNYRHLGKNKTLAIGKYPDIALSTARDKRAEARRLLAEGVDPSYRK 85 Query: 61 KND--KVEQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + + K + + A TF+ VA E+ + + SE L ++ LG R IAEL+ Sbjct: 86 QVEVAKAKVAAANTFEAVAEEYLASLARDRSEGTVRANSHILRKKVYPLLGRRPIAELRP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++L ++++E G++++A R + + + A S +P + G + S Q+R Sbjct: 146 HEILEALQSIEDRGQVDMAHRARTLIGKVFQLAALSDRAPTDPTVVLRGRLKSWRVQNRA 205 Query: 178 ALELKR-IPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 ++ ++ LL +ID+Y G P R A+ F+R+ ELRFA WSEID E +W IP Sbjct: 206 SVTSEQTFAPLLRRIDTYEGSPNVRAAMLFLAHTFVRTVELRFATWSEIDLEDGVWRIPE 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER KM H VPL+ AIL+ + +F D IF+ H + + Sbjct: 266 ER------------MKMGRPHDVPLTASTRAILRDMAKFRRG-DYIFVSAHVGKSVLGDG 312 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+ A++ +GY + + HGFR+ A S L E G S D +E Q++H+ +N+VR AY ++ Sbjct: 313 TLRKAMKSIGYQGR--MTPHGFRSSASSILNERGYRS-DVIEMQLAHVEKNAVRRAY-NR 368 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 + ER M+Q W++ +D R+R Sbjct: 369 TLYWNERVSMMQDWSNLVDGWRKR 392 >UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5EXV7_DICNV Length = 401 Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 127/381 (33%), Positives = 216/381 (56%), Gaps = 29/381 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + GS +W +Y G+++ ++LG YP +++ AR E R L G+DP ++ Sbjct: 36 LSLKITDRGSYFWNFRYYINGRERNMSLGRYPAMSIEAARGEALELRYHLRQGLDPLAER 95 Query: 61 KNDKV-----EQSKARTFKEVAIEWHGTNK-KW-SEDHAHRVLKSLEDNLFAALGERNIA 113 K + E+++ TF+ VA EW+ + +W +E HA +V+ +LE +F +G++ I+ Sbjct: 96 KKKQAAYLAEEKTQKETFEFVAREWYQLKRPEWKNEKHAQQVITTLEQFVFPFIGKKPIS 155 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 + +LL ++ ++ R E A+R++QR A+ YA+Q+ + NPA + S Sbjct: 156 RISPPELLKVME--KLYDRPETASRVKQRIRAVFDYAIQTDRLSRNPAIALPKIFRSTIA 213 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 + P+L + + ++D+Y G P T A+ L +L RS ELRF +W E+ + + W Sbjct: 214 KQ-PSLPARELGIFFKQLDTY-GNPKTALALRLLILTMTRSGELRFGQWQEL--QGNEWH 269 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP ER KM H+VPLS AL IL +++ + F+ + + P+ Sbjct: 270 IPAER------------MKMNRPHIVPLSDWALEILDELRSLRRNNSPYFVTG-NRNTPL 316 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S+ T++ A++ +GY + HGFR A +++ ESGLW+ DA+ERQ++H N+VRAAY Sbjct: 317 SDTTLSLAMKRLGYAGRA--VPHGFRATASTAMNESGLWNPDAIERQLAHTDENAVRAAY 374 Query: 354 IHKAEHLEERRLMLQWWADFL 374 ++AE+LEER M+QWWAD++ Sbjct: 375 -NRAEYLEERHRMMQWWADYI 394 >UniRef50_Q46Z79 Phage integrase n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Z79_RALEJ Length = 418 Score = 207 bits (528), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 144/401 (35%), Positives = 218/401 (54%), Gaps = 28/401 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGK--QKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L + P+G+K WR++Y+ G + +L G YP + L+ AR RR+EAR LA G DP Sbjct: 32 LYLELLPSGAKKWRMKYQRPGSKSENLLTFGDYPAVGLSAARERREEARAQLAVGTDPAL 91 Query: 59 KKKNDK--VEQSKARTFKEVAIEW----HGTNKKWSEDHAHRVLKSLEDNLFAALGERNI 112 + K V ++ TF+ VA EW H T WS +A + + LE +L+ LG+ I Sbjct: 92 ARDLAKATVAEAARNTFRAVAEEWLKHRHDT---WSASYAQKTKQLLERDLYPDLGQHPI 148 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 A + LL + +E G E+ R I +YA+ +G + + AG VA Sbjct: 149 ASITPAFLLTVARKIEARGAYEMPRRALVTAGQIFQYAIGTGRASIDAS---AGMVAQLK 205 Query: 173 R----QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 +H P + ++P+LL +ID YTGRP T A++L +L FIR ELR+A WSE+D E Sbjct: 206 PRPPVKHYPHVADTQLPDLLQRIDRYTGRPETIAAVKLAVLTFIRGGELRYAEWSELDLE 265 Query: 229 ASIWTIPPEREPIPG-VKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH 287 + W +P R + G + H G T H+VPLS Q +A+L+ +KQ+ G + L+F G Sbjct: 266 KAEWHVPSGR--MKGRLWHKLSG----TPHVVPLSRQTIALLEDLKQYTGHYALLFPGAV 319 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 KP++ +N +G+ + V HG R +A + L ESGL+ +E Q+SH N Sbjct: 320 SVLKPVTGEAMNKVFHSIGFKGQQTV--HGLRGLASTLLNESGLFDPRVIEAQLSHKETN 377 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYA 388 AAY H A++L ERR ++QWWAD++D +P +A Sbjct: 378 KTIAAYNH-AKYLPERRRVMQWWADYIDQRARATTAPQRHA 417 >UniRef50_A6QCY9 Site-specific recombinase, phage integrase family n=2 Tax=Proteobacteria RepID=A6QCY9_SULNB Length = 409 Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 126/384 (32%), Positives = 215/384 (55%), Gaps = 24/384 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG--- 57 ++L + P G K+WRL+YR++GK+K ++LGVYP +L DAR +R++ + +A G+DP Sbjct: 31 LYLSITPKGQKWWRLKYRFDGKEKRISLGVYPNTSLQDARQQREDFKTQIAKGIDPSRER 90 Query: 58 -DKKKNDKVEQSKAR-TFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAE 114 +KK+ K E K+R TFK + +EW + + +E + ++LE + +A LG++++ + Sbjct: 91 KEKKEAVKAEVFKSRNTFKSICLEWIELQRPQMAEATLSKYERTLEKDFYAPLGDKSMND 150 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA---VASC 171 + DL+ + ++ G +E A R I RYA+Q + +N +++ + Sbjct: 151 ITRHDLITIAQVIQDRGAVETAHRSLGLCNRIWRYALQFDKVGHNIVSDISKKDVLRSYK 210 Query: 172 NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 N+ + + RI EL+ ID+YTG T+ A+ L L F+R +R+A WSE D E I Sbjct: 211 NKSFKTITDEVRIGELMNAIDNYTGEFTTKSALRLLPLTFVRPHNIRYAEWSEFDLENGI 270 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 WTIP E+ KM+ H +PL+ QA+ ILK+I + +F K Sbjct: 271 WTIPAEK------------MKMKKEHKLPLAPQAVKILKEIYPYTNDAKYVFHSPISRLK 318 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 +SENT+N AL+ + + E+ HGFR M + ESG + + +E ++H N V+ Sbjct: 319 AISENTLNMALKRLDFGG--EIVSHGFRAMFSTLAYESGKFRSEVIEDLLAHQEANQVKK 376 Query: 352 AYIHKAEHLEERRLMLQWWADFLD 375 AY ++A + E+R +++W+AD+L+ Sbjct: 377 AY-NRAAYDAEKREIVEWYADYLE 399 >UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enterobacteriaceae RepID=INTZ_ECOLI Length = 402 Score = 206 bits (524), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 131/378 (34%), Positives = 213/378 (56%), Gaps = 22/378 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLVHPNGSKYWR +Y ++ + A+GVYP ITL +AR R E+R L+ANG++P ++ Sbjct: 31 LFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLITLKEARRRATESRSLIANGINPVEQA 90 Query: 61 KNDKVEQS--KARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +K + A FK+VA +W T WSE +A +V +LE +++ LG+R+I ++ Sbjct: 91 RKEKAIDALNMAAGFKKVAEDWFATRVGGWSESYAKQVRSALEKDVYPVLGKRSIVDITA 150 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 RD+LA ++ E + E A +L++R I ++AV + L+ NP ++ A+ + H Sbjct: 151 RDVLALLQKKERTAP-EQARKLRRRIGEIFKFAVITELVTRNPVADLDTALKARRPGHNA 209 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + + IP ++ G + AI L +L +R++ELR RW I+ E + T+P E Sbjct: 210 WIPISEIPAFYKALER-AGSVQIQTAIRLLILTALRTAELRLCRWEWINLEDATITLPAE 268 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 K R H+VPLS QA+ +L+ G +F G KP+S + Sbjct: 269 V------------MKARRPHVVPLSRQAVELLQDQFTRSGYSAFVFPGRF-MDKPLSASA 315 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + AL +GY K GHG+RT ++L ESG +S D +E Q++H+ + +R Y ++A Sbjct: 316 ILKALERIGY--KSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKG-IRGVY-NQA 371 Query: 358 EHLEERRLMLQWWADFLD 375 +L++RR M+Q +AD +D Sbjct: 372 AYLKQRRAMMQDYADAID 389 >UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TYD6_MARAV Length = 412 Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 129/371 (34%), Positives = 209/371 (56%), Gaps = 22/371 (5%) Query: 10 SKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVE--Q 67 +YWRL+YRY GK+K+LALGVYP+++L +AR +RDEA++LLA+ +DP ++ +K E + Sbjct: 41 GRYWRLKYRYGGKEKLLALGVYPDVSLKEARAKRDEAKRLLADNIDPVTHRQREKAERVE 100 Query: 68 SKARTFKEVAIEW--HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIK 125 + A TFK +A+EW H K + + LE + LG R +AE++ D+LA ++ Sbjct: 101 ATATTFKGIALEWLEHVHKKNVGATTYPKNKRRLEMYAYPKLGRRPMAEIEPPDVLAILR 160 Query: 126 AVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALEL-KRI 184 +E G ++ A RL+ + RYAV +G + ++ G + + N +H A+ I Sbjct: 161 EIEGKGHVDNAHRLKTLIGQVFRYAVSTGRATRDVTADLRGILPAPNVKHHAAVTTPDEI 220 Query: 185 PELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGV 244 ++L KID+Y G P A++L+ +F+R LR RW EID++A+ WT + P V Sbjct: 221 ADMLKKIDTYWGSPTVCLALKLSPYLFLRPGNLRHMRWEEIDWDAATWTTDTTKNGEPLV 280 Query: 245 KHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRV 304 VPL+ QA+ +LK++++ G + +F +PMSEN + AL Sbjct: 281 --------------VPLARQAIDLLKELQELNGNREWVFPSGAGKGRPMSENAITGALNR 326 Query: 305 MGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERR 364 + + + + HGFR MA + L E + + +E QM+H R+ AY ++ L ER+ Sbjct: 327 L--ELQGIMSAHGFRAMAKTVLTERLGFRTEIIEMQMAHRVRDVHGRAY-NRTTWLPERQ 383 Query: 365 LMLQWWADFLD 375 M+Q WAD+LD Sbjct: 384 AMMQQWADYLD 394 >UniRef50_Q0BR52 DNA integration/recombination/inversion protein n=6 Tax=Alphaproteobacteria RepID=Q0BR52_GRABC Length = 380 Score = 205 bits (521), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 128/371 (34%), Positives = 205/371 (55%), Gaps = 33/371 (8%) Query: 15 LQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKARTFK 74 ++YRY GK+K+L+ G YP ++LA+AR+RR +A+ +L G DPG K TF+ Sbjct: 1 MKYRYGGKEKLLSFGAYPGVSLAEARLRRAKAKVVLGEGGDPGAGNK-----PRTQMTFE 55 Query: 75 EVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRL 133 E A +WHG HA R+L LE + F LG+ ++ + D+LA ++ VE G L Sbjct: 56 EAARKWHGHRLDALDAGHATRLLTRLERDAFPVLGKLGLSVITPTDVLAMVRRVEARGAL 115 Query: 134 EVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-QHRPALELKRIPELLTKID 192 +V+ RL+Q + I R+A+ G + +PA+ + + R +H P + +P L+ ID Sbjct: 116 DVSRRLKQHVSQIYRFAIAHGWAERDPAEHLGQLLKPKPRTRHMPRIGRSELPALIRAID 175 Query: 193 SYTG------RPLTRWAIELTLLIFIRSSELRFARWSE---IDFEASIWTIPPEREPIPG 243 Y G R +TR A+ TLL ++R++E R ARW E +D + +W +P ER Sbjct: 176 GYDGEETPRRRAVTRAALLFTLLTWVRTNETRHARWEEFEDLDGASPVWRVPAER----- 230 Query: 244 VKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALR 303 KM H+VPL+ +A+L++++ Y D +F+G+ +P+S+NT+ A Sbjct: 231 -------MKMVREHVVPLAPAVVALLQEVR-VYSLADYVFVGEKPD-QPISQNTMIYACY 281 Query: 304 VMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEER 363 MGY + V HGFR +A + E+ + D +E ++H+ R+ VR AY + A +L R Sbjct: 282 RMGYRGRQTV--HGFRGLASTWANEAECYQPDWIEMALAHVERDEVRGAY-NAALYLSPR 338 Query: 364 RLMLQWWADFL 374 R ML+ WA F+ Sbjct: 339 RRMLEDWAGFI 349 >UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P090_AZOSE Length = 402 Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 127/378 (33%), Positives = 194/378 (51%), Gaps = 19/378 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WR ++R GK+ + A+G YP ++LADAR RDEAR L+ G +P + Sbjct: 26 LYLEVTPAGGKLWRYRFRLAGKENVFAIGAYPRVSLADARKARDEARDLVKQGFNPSHYR 85 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K V TF VA EW+ + WS+ H H V L+ ++ +G+ I + + Sbjct: 86 QQAKQAVIDENLNTFAPVADEWYQSKVDSWSKGHRHHVRTILDKDILPRIGKLPIRSITS 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 L +K + G A +Q ++ A+ + D NPA+ + +A C +H Sbjct: 146 PLLHDVMKKIVARGATTRAILARQIMGSVFNLAILTHRADTNPAEPLKRQIARCVTEHHR 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 LE + + + L K+ YTG TR A++L +L +R E+ ARW+E D + WTIP E Sbjct: 206 HLEERDVGDFLRKLSDYTGHATTRIALQLLMLTAVRPGEVCGARWAEFDIDGQNWTIPKE 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R H+VPLS QA+ +LK+++ G +F + M + Sbjct: 266 R------------MKTRKPHIVPLSNQAVDLLKELEPITGDTAFLFPSQGTKTQTMPTQS 313 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + +A+ +GY K HG R + L G ++ D +ERQ++H N VRA+Y H Sbjct: 314 IRNAVVKLGYADK--FSPHGARGTFSTMLNGRG-YNSDWIERQLAHDEGNRVRASYNH-M 369 Query: 358 EHLEERRLMLQWWADFLD 375 ++L ERR MLQ WAD LD Sbjct: 370 QYLPERRKMLQEWADLLD 387 >UniRef50_A6SWC6 Prophage integrase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWC6_JANMA Length = 414 Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 125/382 (32%), Positives = 208/382 (54%), Gaps = 15/382 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGK--QKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 M+L + P+GSK WR+ YR E + L G YP + LA+AR +R + +K + GVDP Sbjct: 31 MYLEILPSGSKVWRMAYRQENRTTSTRLTFGHYPAVGLAEARRKRADTKKQIVEGVDPAQ 90 Query: 59 KKKNDKV--EQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++ +K + A TF+ VA WH ++W A+ +L+ LE ++F +G+R IAE+ Sbjct: 91 ARRVEKAISATAAANTFEAVARMWHQNKLEQWQPRTANNILRRLEQDVFPLIGKRPIAEV 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 K +L ++ +E G E+A R Q + I RYA+ G+ + +P + GA+ + Sbjct: 151 KAPVMLDVLRQIEKRGAAEIARRNAQVCSQIFRYAIACGIAENDPVPALRGALKPRIKGV 210 Query: 176 RPALELKRIPELLTKIDSYTGR--PLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 A+ + +PE L ++ R P+TR ++L +L F+R+SEL WSE+D + W Sbjct: 211 HAAILVAELPEFLETLNHNKARMFPVTRILMQLMMLTFVRTSELTETPWSEVDLKNEQWV 270 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP +R + K + R + H V L Q A L++++ + G + +F D KP+ Sbjct: 271 IPWQRMKMGKRKINPR----KVDHHVFLPKQGWAFLRELRTYTGGNQWLFPNQRDPKKPI 326 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S + +AL+ +GY K GHGFR++A L G +ERQ++H + + A+Y Sbjct: 327 SNGAILAALKRLGYAGK--HTGHGFRSLAKGILKTLGN-DISNIERQLAHSSGEAYGASY 383 Query: 354 IHKAEHLEERRLMLQWWADFLD 375 + LEER++M+Q +AD++D Sbjct: 384 -DRESFLEERKIMMQGYADYID 404 >UniRef50_B6BKY5 DNA integration/recombination/inversion protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKY5_9PROT Length = 400 Score = 204 bits (520), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 132/386 (34%), Positives = 207/386 (53%), Gaps = 34/386 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLAN-GVDPGDK 59 ++L V+ NG K+WR +Y+Y K K ++LGVYP+ TLA+AR +RDEAR +LAN DP K Sbjct: 31 LYLEVNINGGKWWRFRYKYNDKIKKVSLGVYPDTTLANARRKRDEARNILANDNRDPFIK 90 Query: 60 KKNDKVEQSKARTFKEVAIEWHGT--NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K E+ +TF+E A EW+ T + + S+ H R +K + +++ +G + + ++K Sbjct: 91 IVVHKKEEVVQKTFQEWA-EWYITEISTELSDTHITRTVKGFKKDVYPIIGSKRMNDIKA 149 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQS--GLIDYNPAQEMA-----GAVAS 170 RD++ + ++ G +E A + + A+ + ID NP ++ GA + Sbjct: 150 RDIIKIMHIMKERGAVESARKTFSSINRVFAKALSNFPDEIDRNPTADIKLGDILGAKQT 209 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 N + E K + LL I YTG T A+ + F+R +R ARW EIDF Sbjct: 210 TN--YPIITEPKELATLLKAIKEYTGDTSTILALTMIAHTFVRPINIRLARWDEIDFNTK 267 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTH--LVPLSTQALAILKQIKQFYGAHDLIFIGDHD 288 W IP SKM+T +VPLS Q + +LK+ K L+F Sbjct: 268 QWVIP--------------ASKMKTKKELIVPLSKQVIELLKEAK---SDSALVFPSIRS 310 Query: 289 SHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 PMS+N + ALR MGY ++ E+ H FR + + E G+++ D +E Q++H +S Sbjct: 311 KTSPMSDNALVGALRRMGY-SREEIVAHSFRGIFSTIAHEKGIYAHDVIETQLAHTVGSS 369 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFL 374 V AY ++A++LEER M+QWW+D+L Sbjct: 370 VSQAY-NRAKYLEERTKMMQWWSDYL 394 >UniRef50_A1W8P6 Phage integrase family protein n=4 Tax=Comamonadaceae RepID=A1W8P6_ACISJ Length = 413 Score = 204 bits (520), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 128/380 (33%), Positives = 211/380 (55%), Gaps = 13/380 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+GSK W + ++GK+ +ALG YP +LADAR RD A+ A+GVDP ++ Sbjct: 27 LYLEVSPSGSKRWFWKTYFDGKEGRMALGSYPTQSLADARKARDIAKLKKADGVDPVQER 86 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K++ S++ TF+ +A+EWHG +WS+ HA R + LE +LF +G+R + ++ Sbjct: 87 KLEKLKGSRSGGDTFQAIALEWHGRQVDQWSDTHAGRTKRQLERDLFPWIGDRQMTSIEP 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAV-QSGLIDYNPAQEMAGAVASCNRQHR 176 +LLA ++ +E G +E A R I RY + +G + + + + Sbjct: 147 MELLATLQKIEERGAMETADRALMLCRQIWRYWLPTAGNTQRDITVGLKNRLTPYRGTNF 206 Query: 177 PAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 PA+ E KR ELL + Y G R A+ L L++ R LR W+E+D +A++WTIP Sbjct: 207 PAIVEPKRFGELLRAMHVYKGSHTVRTALLLAPLLYQRPGNLRAMEWAEVDLDAALWTIP 266 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 + +K + + H VPL TQA+ +L+ ++ G +F G D +PMS+ Sbjct: 267 SMK-----MKRTKTEKEQGEPHAVPLPTQAVELLRNLQALTGRGTYVFPGQRDHERPMSD 321 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 N+V SAL +G+ T E HGFR A + LV+ A+E ++H ++S +Y + Sbjct: 322 NSVRSALYSLGFGT--EQSWHGFRASARTMLVDQLDLDPLAIEANLAHAVKDSNGRSY-N 378 Query: 356 KAEHLEERRLMLQWWADFLD 375 + ++L++R +Q WA++LD Sbjct: 379 RTQYLKKRYDQVQMWANYLD 398 >UniRef50_Q0I4F8 Integrase n=1 Tax=Haemophilus somnus 129PT RepID=Q0I4F8_HAES1 Length = 413 Score = 204 bits (518), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 127/380 (33%), Positives = 204/380 (53%), Gaps = 21/380 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LLV NGSK WR Y Y+ K+K+++LG YPE +L DAR +RDE R LLA ++P D Sbjct: 31 LYLLVKSNGSKLWRFNY-YDLLKKRKLISLGSYPETSLLDARTKRDEYRALLAKDIEPQD 89 Query: 59 K--KKNDKVEQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K+ ++ ++ T VA +W + K D + LE +LF LG I+++ Sbjct: 90 YIFKQKEQAIFNQCNTLIGVAKDWREMKSSKVEADTMKDQWRLLELHLFPHLGNMPISDI 149 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 ++ + + E+ ++ + IMR+AV +GLI +NP + S QH Sbjct: 150 TAPFTRMKLQKLADDKKFEMLKKVIRGLNEIMRFAVNAGLIQFNPTANLQELFPSGEVQH 209 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 RP++ ++P+ L ++ + TR +E LL +R SE W EIDFE W IP Sbjct: 210 RPSIHPDKLPKFLESVNKANIQLQTRCLLEWQLLTMVRPSEAAGTMWREIDFENKTWLIP 269 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 +R + G K S HLVPLS QA+ IL ++ G D +F + D MS Sbjct: 270 KDR--MKGKKRS---------HLVPLSQQAINILNIMRPITGNCDFVFPKNGDLTTNMSS 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T+N ALR MGY +C HGFR++A ++L E+ ++ + +E +SH+ + VR AY Sbjct: 319 ETINKALRKMGYQGI--LCAHGFRSIASTALNENE-FNVEIIEALLSHVKGDKVRTAY-D 374 Query: 356 KAEHLEERRLMLQWWADFLD 375 ++ + +++R ++WW +F++ Sbjct: 375 RSTYEKQKRQYIEWWGNFVE 394 >UniRef50_Q1NGR6 Putative phage integrase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGR6_9SPHN Length = 428 Score = 203 bits (517), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 125/391 (31%), Positives = 211/391 (53%), Gaps = 34/391 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V PNG + W YR+ KQK + G YP +++ ARV R+E + L+ G DP + K Sbjct: 25 LNICVLPNGRREWCFSYRFHHKQKSITGGDYPLMSIDRARVWREEMKAALSAGKDPANIK 84 Query: 61 KNDKVE-QSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + K E Q++ TF+++A EW + WS+ +A + + LE ++F +G+ ++ + R Sbjct: 85 RQLKYEDQAERTTFRQLAYEWMVAKRPGWSDRYAGVIERRLEADIFPTIGKLSVRSILPR 144 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV-ASCNRQHRP 177 D+L +K +E G E+A R++ + I R+ + G + +P +++ + HR Sbjct: 145 DMLGALKCIEDRGATEMAHRVRAYCSEIFRFGIPDGRVLTDPCRDLGTVMRKRAAVTHRS 204 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS---IWTI 234 + +K +P +++ TG L+ A+ T+L +R++E R A+WSE + +W I Sbjct: 205 KIPIKELPHFYAALNADTGSRLSHLALRWTILTMVRTTETRHAQWSEFEGLGGPEPLWRI 264 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF----------YGAHDLIFI 284 P ER KMR HLVPL QA+A+L++IK+ +G + I Sbjct: 265 PAER------------MKMRVEHLVPLPPQAVALLREIKELNVYGKYGNERFGQYLFPVI 312 Query: 285 GDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM 344 G+ +S N + L+ +G K V HGFR++A + L E+GL+ D +E Q++H+ Sbjct: 313 GNQGDT--ISSNRMLVLLQRLGVGDKATV--HGFRSIASTVLNETGLFKPDWIELQLAHV 368 Query: 345 ARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 VRA Y + A +L RR ML+WWAD+LD Sbjct: 369 P-GGVRAVY-NAARYLSHRRQMLEWWADYLD 397 >UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, phage integrase family n=2 Tax=Pseudomonas RepID=Q48NQ4_PSE14 Length = 391 Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 122/377 (32%), Positives = 203/377 (53%), Gaps = 20/377 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V GSK WR ++R GK+ A+G YPE++L+DAR RD AR L+ +G +P + Sbjct: 26 LYLEVTTGGSKLWRYRFRLAGKENTYAIGAYPEVSLSDARTERDAARDLVKSGRNPAHVR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEW-HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +K +Q TFK V+ EW + ++ + ++ ++ ++++ +G + E+ Sbjct: 86 QTEKAQQLTENRNTFKIVSQEWIEKRLAQRTQKYRDQIERAFVNDVYPRIGRLPLREITA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L I A++ +A ++Q +A+ Y V + D +PA + GA+ H Sbjct: 146 AQVLEIITAMDRRNATTLALMVRQWISAVFCYGVATLRADSDPASAVRGAIRRNEVNHSR 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + L + E + +Y G T A+ L ++F+R+ ELR A WSE D +A++WTIP Sbjct: 206 PMSLIELREYFRAVKTYGGHRRTVIALYLLPILFVRTIELRLAEWSEFDLDAALWTIPAR 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R HLVPL ALA+L+++++ A +L+F G +P+S T Sbjct: 266 R------------MKKRKIHLVPLPESALALLRELREI-TAGNLLFPGMRHPKEPISATT 312 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +N AL M D K C H FR A + L ES LWS D +E Q++H+ + +AAY H A Sbjct: 313 LNRALEYM--DLKGWHC-HDFRATASTHLYESELWSSDVIEFQLAHVEQKKSKAAYNH-A 368 Query: 358 EHLEERRLMLQWWADFL 374 +L R+ ++QWW +++ Sbjct: 369 SYLPARKALMQWWDNYI 385 >UniRef50_A5EUW8 Bacteriophage P4-like integrase n=3 Tax=root RepID=A5EUW8_DICNV Length = 399 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 133/374 (35%), Positives = 198/374 (52%), Gaps = 18/374 (4%) Query: 4 LVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKND 63 +V PNGS WR++Y GK++ LALG YP ++L++AR R+ + GVDP + Sbjct: 28 VVMPNGSILWRMRYVLAGKRRELALGKYPAVSLSEARQIVLLYREQIERGVDPHAQHVER 87 Query: 64 KVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAP 123 +Q + V + K S + L +++ + G R +AE+ + A Sbjct: 88 HKKQDGVTVAEAVELLLSEKAKYCSASYLESCRSRLSNHVLSRFGARALAEVSEDEWRAL 147 Query: 124 IKAVEMSGRLEVAARLQQRTTAIMRYA-VQSGLIDYNPAQEMAGAVASCNRQHRPAL-EL 181 I ++ G+ A R+Q + + +++GL NP E+ G V Q+ P + Sbjct: 148 INWLDNGGKNYTAIRVQDLAGELYKTVRLKTGLKIANPILEIRGTVKKKPAQNYPRITNP 207 Query: 182 KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPI 241 R ELL ID + GR A++ L+F R ELR W E+DFE ++W IP E+ Sbjct: 208 ARFGELLHAIDYFNGRWQVYLALKFLPLVFCRQIELRRMVWQEVDFERALWCIPAEK--- 264 Query: 242 PGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSA 301 KMR HLVPLSTQA+AIL+Q +Q + DL+F G + +P+S NT+ SA Sbjct: 265 ---------IKMRRAHLVPLSTQAIAILRQAEQLRCS-DLVFCGVRNPRQPISVNTIGSA 314 Query: 302 LRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLE 361 LR +G+ E+ GHGFR A + L E G W V+ Q++H R+SV +AY H AE+L Sbjct: 315 LRTLGFGHD-EMVGHGFRGTAATLLNELG-WDSHIVDFQLAHWQRSSVSSAYNH-AEYLT 371 Query: 362 ERRLMLQWWADFLD 375 +RR M+Q WAD+ D Sbjct: 372 QRREMMQAWADYCD 385 >UniRef50_A9I0E1 Phage-related integrase n=5 Tax=Burkholderiales RepID=A9I0E1_BORPD Length = 536 Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 121/377 (32%), Positives = 204/377 (54%), Gaps = 15/377 (3%) Query: 10 SKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN--DKVEQ 67 K W +Y + K L +G YPE+TLA AR + EA ANG+DP + ++ ++ Sbjct: 134 GKAWIYRYMKDSKPIKLGMGPYPEVTLAQARTKAYEANSQRANGLDPKEVREQLAEQTRI 193 Query: 68 SKARTFKEVAIEWHGTNKK---WSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPI 124 ++ TF+ +A WH + KK WSE +A +V++ LE ++F +G + I + +++ + Sbjct: 194 ARLHTFELLARAWHASAKKDREWSEGYAQKVIRHLEIHIFPWVGHKPIEMILPTEIVRCL 253 Query: 125 KAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID--YNPAQEMAGAVASCNRQHRPAL-EL 181 + G LE A R+++ + +YAV G ++ N + G + +H A+ E Sbjct: 254 HRPKDRGNLETAQRVREAVQHVYQYAVDVGALEPSKNFVNKNTGGLPPPRSRHFAAITEP 313 Query: 182 KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPI 241 ++ +LL I SY G+ +TR A+ L ++F R ++R A W +I E +W PPE+ Sbjct: 314 AQLGQLLRDIRSYHGQFITRCALRLAPMMFQRPGQIRLADWEDISLEVELWRCPPEKM-- 371 Query: 242 PGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG---DHDSHKPMSENTV 298 ++ + H+VPL QAL IL+++ G +F + + +S+NT+ Sbjct: 372 -KMREWQKRDSRTPAHIVPLPRQALEILRELHPLTGPTGPVFRSMSRRSEKSRYISDNTI 430 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 N+ALR MGYDTK E+ GHGFR A + + E W D +ER ++H + + ++Y +A Sbjct: 431 NAALRTMGYDTKEEITGHGFRATARTMIREHLGWEPDVIERHLAHTSDEELGSSY-DRAA 489 Query: 359 HLEERRLMLQWWADFLD 375 + +R+ M+Q WADFLD Sbjct: 490 FIAQRKAMVQQWADFLD 506 >UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV Length = 385 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 121/377 (32%), Positives = 203/377 (53%), Gaps = 22/377 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V +G K W+L+Y+ +GK+K+L +G YP +TL +AR + ARK ++ G+DP K Sbjct: 25 LYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAK 84 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K S +F + EW+ K+ WS +A + K +D++ +G I +++ Sbjct: 85 K----ASSNNNSFSAIYKEWYDHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQ 140 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 LL I+ E G +E A + ++R + RYA+ +G YNPA ++A A+ +++ P L Sbjct: 141 LLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFL 200 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 +IP + +++G ++ A ++ +R+ ELR +W +DFE I TI Sbjct: 201 PADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITI----- 255 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYG-AHDLIFIGDHDSHKPMSENTV 298 K R H+VP+S Q + +L + + +F G +D KP+ EN V Sbjct: 256 -------DASVMKGRKIHVVPMSDQVIELLTTLSSITKPVSEFVFAGRNDKKKPICENAV 308 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 ++ +GY+ +E GHGFR S+++ W DA+E Q++H SVR Y H A+ Sbjct: 309 LLVIKQIGYEG-LE-SGHGFRH-EFSTIMNEHEWPADAIEVQLAHANGGSVRGIYNH-AQ 364 Query: 359 HLEERRLMLQWWADFLD 375 +L++RR M+QWWAD+LD Sbjct: 365 YLDKRREMMQWWADWLD 381 >UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomonas RepID=A5W5R9_PSEP1 Length = 393 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 123/378 (32%), Positives = 198/378 (52%), Gaps = 20/378 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G K W ++ + GKQ ++LG YPEI L +AR RRDEAR+ +A G DP + + Sbjct: 26 LTLYVAETGVKSWHFRFTWLGKQARISLGTYPEIGLKEARARRDEAREDVAQGKDPRESR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKKWSEDHAHRVL-KSLEDNLFAALGERNIAELKT 117 + KVE+ +K RTF+ V EW K + +V+ ++E ++ A G R I +K Sbjct: 86 REKKVERLGAKERTFRRVYEEWLEFRKGGLTESTVKVISNAMELDVLPAFGLRQIDSIKR 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS-CNRQHR 176 D++ I+ +E G + A + +Q + RYAV G+I+ NP EM ++R Sbjct: 146 ADVITLIRRIERRGSITTAVKTRQWIGQVFRYAVAIGMIEINPTAEMHAVTEKMAPHKNR 205 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 P L +P ++ I+ + A +L +L R +E+R A WSEID + + W+IP Sbjct: 206 PFLAFTEMPAIIKAIEESQSGLQLQCATKLLILTACRPAEVRKAEWSEIDLDTATWSIPA 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 + KMR H+VPLS QA+ +L+ + G +F D+ +P+ N Sbjct: 266 SK------------MKMRRDHVVPLSRQAVELLRSMLPISGGLKYVFPNRTDAVRPIGIN 313 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 + L GY + HGFR + + + G +++D +ERQ++H +++R Y H Sbjct: 314 YAVNLLDRCGYTGR--QSPHGFRHLFSTEMNSRG-YNKDWIERQLAHADSSAIRDVYNH- 369 Query: 357 AEHLEERRLMLQWWADFL 374 A +LE+RR M+Q WAD + Sbjct: 370 ATYLEQRRDMMQAWADLV 387 >UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7MWW9_VIBHB Length = 410 Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 119/386 (30%), Positives = 203/386 (52%), Gaps = 22/386 (5%) Query: 3 LLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 L + PNG+K W Y + K+K + LG YP+++LA AR +R R+L+A G+DP + Sbjct: 33 LRIMPNGTKSWLFNYIHPSTKKRKNIGLGKYPDVSLATAREQRQTMRELVAKGIDPKTHR 92 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 N + + A T VA EW + S D+A + +SLE ++F LG+ + E+ Sbjct: 93 DNQQTAEKLAAQDTLLHVAKEWFELKQHSVSSDYADDIWRSLELHIFPNLGQLPLREILA 152 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++A ++ +E G LE R+ QR +M YAV G ++ NP + +H Sbjct: 153 PTVIAQLRPLEAKGSLETVKRVCQRLNEVMTYAVNCGKVEANPIANIKQVFKKPKVKHMK 212 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + + + LL + + +TR A E L R SE A W+EIDF +WTIP + Sbjct: 213 TITPQDLSFLLESMSKVNIKLVTRCAFEFQLHTLTRPSECVKAEWNEIDFAQKLWTIPKD 272 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 + KM+ H +PLS + +L+ +K H +F D + M+ + Sbjct: 273 K------------MKMKRDHKIPLSDPVIKLLQFMKPISFEHKYVFPSDAKAGSHMNSQS 320 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 VN+A++ G+ K + HG R++ ++L E G +++DA+E ++H+ +N++R Y + A Sbjct: 321 VNAAIKRAGFSGK--LVSHGMRSIGSTALNEQG-FNKDAIELCLAHVDKNTIRDIY-NNA 376 Query: 358 EHLEERRLMLQWWADF-LDVNRERFI 382 E+LEERR ++QWW+++ + ++ FI Sbjct: 377 EYLEERRNVMQWWSEYIISASKNTFI 402 >UniRef50_C8NCE3 Phage integrase family site-specific recombinase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCE3_9GAMM Length = 401 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 128/385 (33%), Positives = 199/385 (51%), Gaps = 25/385 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V +G KYWRL YR G KQ+ ++ GVYP+++L AR RRDE + L+A G+DP Sbjct: 27 LCLQVTSDGKKYWRLYYRMPGSKKQQTVSFGVYPKVSLKQARQRRDEVKLLIARGIDPKL 86 Query: 59 KKKNDKVEQSKA--RTFKEVAIEW---HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIA 113 K + +++ A TF +VA W KKW + H LE ++ +G+ + Sbjct: 87 AAKQLRQDRTVALENTFADVAKRWLEHRAEVKKWGKQHQRATRSMLERYMYPRIGDYPVT 146 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYA-VQSGLIDYNPAQEMAGA-VASC 171 E++ +L ++ ++ +G++E + +L TT + RYA + + YNPA +++ V Sbjct: 147 EIEPTQILRVLQELQAAGKIETSHKLLSATTQVFRYAMITIRICKYNPAADLSELLVTGK 206 Query: 172 NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 + R + I LL +D YTG P R L LIF R +E+R RW EIDFE + Sbjct: 207 SVPFRHITDPGEIGRLLVALDEYTGSPQARGLARLHPLIFTRPTEIRLMRWDEIDFEQRL 266 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W + + + + VP S QA I+ ++ G D +F H +K Sbjct: 267 WR-----------RSDDETVRRKNVNAVPFSRQAWEIIAGLRLVTGRTDYVFCNIH-RNK 314 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 P S L+ +GY K + HG+R A S+L+ + + VE+Q+ H +N VR Sbjct: 315 PFSAGAEGKVLKSIGYHEK--IVPHGWRHTA-STLLHNQDYDSIWVEKQLGHTDKNEVRG 371 Query: 352 AYIHKAEHLEERRLMLQWWADFLDV 376 Y H A++LE+RR MLQ WAD+LD+ Sbjct: 372 TYNH-ADYLEQRRKMLQEWADYLDM 395 >UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IRV8_BORPD Length = 402 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 133/383 (34%), Positives = 197/383 (51%), Gaps = 25/383 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HLLV PNGS+ WR ++R GK+++ A+G YP++ LA+AR R AR+L+A+GV P ++ Sbjct: 33 LHLLVQPNGSRLWRYKFRLGGKEQVFAIGRYPDVGLAEARERHLAARRLVADGVSPTAQR 92 Query: 61 KNDKVE------QSKARTFKEVAIEWHGTNKKWSEDHAHRVL-KSLEDNLFAALGERNIA 113 ++D+ ++KA TFK V W T + R + ++ L LG R + Sbjct: 93 RDDRARMAEDAARAKAGTFKAVLDSWKATPARALAPATIRQRDREIDRYLEPKLGARPVG 152 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 E+ R+L +K V + EVA L+ +I +AV GLI NP A Sbjct: 153 EITRRELADLLKTV-ATDTPEVARNLRTHMNSIFEHAVDVGLIAGNPTPGPRALPARKQT 211 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 H PA+ + + LL ID+ +P T+ A L LL R E+ RW EID +A W Sbjct: 212 SH-PAVAMDELGALLASIDASACQPATKAAFRLLLLTACRKLEITSGRWDEIDLDAGEWL 270 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP +R K RT H VPLS QA+ +L+ ++ G D +F + PM Sbjct: 271 IPADR------------MKTRTAHWVPLSRQAVELLRAVRAHSGG-DYVFPHRDKPNTPM 317 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S +N LR +GY + E+ HG R++ + + D +ER ++H R+ VRAAY Sbjct: 318 SPTALNEMLRRVGY--RREMTVHGTRSIFSTWANAQPGANVDVIERCLAHAPRDKVRAAY 375 Query: 354 IHKAEHLEERRLMLQWWADFLDV 376 A + +ERR +LQ WAD LD Sbjct: 376 NRHA-YKDERRALLQSWADVLDA 397 >UniRef50_Q8W6M6 Putative uncharacterized protein orf1 n=1 Tax=Sinorhizobium phage PBC5 RepID=Q8W6M6_9CAUD Length = 433 Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 124/381 (32%), Positives = 198/381 (51%), Gaps = 14/381 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V G+K WRL+YR++GK+K L +G YP+++LADAR R+ A++ L +G DP K Sbjct: 27 LNLFVLSTGTKSWRLRYRFDGKEKTLVIGNYPDVSLADARGEREAAKETLKSGRDPNVVK 86 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K +Q A TF+ +A EWH K W E HA VL SL +++F +G+ I ++ Sbjct: 87 KIEKAIGKQQAADTFEVLAREWHKLQKPTWVEKHASDVLDSLVNDVFPIIGQMPIRDIDA 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L ++ VE E A R++QR +AI Y + SG +PA + GA+A + +P Sbjct: 147 PTVLGVLRLVEQRDAKETARRIRQRISAIFVYGIASGRASEDPAAVVRGAMAPMKKGRQP 206 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWS---EIDFEASIWT 233 A+ L + E+L P+T+ + L L +R L W+ E+D +W Sbjct: 207 AITNLDKAREMLVATWKTPSHPVTKLGLRLLTLTAVRPGTLISTPWTELDEVDESDPVWV 266 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP R + H+ + R HL+PLS +A+ + ++ G + +HKPM Sbjct: 267 IPAARMKL---LLQHKDDETR-DHLIPLSKEAMETITVLRSLTGRGPFVLPNGRHAHKPM 322 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 SEN + L GY K HGFR+ + + E R ++ ++H ++ V AY Sbjct: 323 SENALGYLLNRSGYHHK--HVPHGFRSTFSTVMNERYPADRQVIDLMLAHTPKDKVEGAY 380 Query: 354 IHKAEHLEERRLMLQWWADFL 374 ++AEHLE R+ + Q W + Sbjct: 381 -NRAEHLERRKELAQIWDGLI 400 >UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobacillus minor 202 RepID=C8KXV2_9PAST Length = 406 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 123/385 (31%), Positives = 201/385 (52%), Gaps = 28/385 (7%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L+V P GSK WR Y K+ +ALG+YP ITL+ AR RDE + LLANG+DP + Sbjct: 31 LFLIVSPTGSKSWRFNYYRPISKKRAKIALGMYPAITLSKARALRDEYKHLLANGIDPQE 90 Query: 59 KKKNDKVE--QSKARTFKEVAIEWHGTNKKWSEDHAHRVLKS----LEDNLFAALGERNI 112 K +++ Q K T +A +W +K + + LK LE +F LG+ I Sbjct: 91 HCKQLELQKLQFKQNTLFAIAEKWK---QKKETEVKEKTLKPRWRMLEKYIFPELGDLPI 147 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV-ASC 171 +E+ L I+ V G + Q IM +AV G+I++N +A Sbjct: 148 SEISPLRLSNTIRPVFDRGIANTGLVIIQMVNEIMVFAVNLGIIEFNKCSNVASTFNVKK 207 Query: 172 NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 +H+P + +++PE ++ + + + IE +LL +R +E A+W EI+F+ ++ Sbjct: 208 TTKHQPTIRPEKLPEFMSALRDSAVDLVVKLLIEFSLLTMVRPNEAANAKWDEINFDDAL 267 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W IP ER KM+ VPLS+QA+ +L ++KQ G IF K Sbjct: 268 WHIPAER------------MKMKKAFTVPLSSQAIKLLNKLKQITGRSRFIFQSPRAPQK 315 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-WSRDAVERQMSHMARNSVR 350 PMS T N+A+R +GY+ K + HG R++A + L E + + + +E +SH +N +R Sbjct: 316 PMSSVTANAAIRRIGYNGK--LTSHGLRSIASTYLSEKFIDINVEIIEACLSHQGKNPIR 373 Query: 351 AAYIHKAEHLEERRLMLQWWADFLD 375 AY +++ +LE+R+L++ W F++ Sbjct: 374 NAY-NRSTYLEQRKLLMADWGQFVE 397 >UniRef50_D1B120 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B120_SULD5 Length = 419 Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 129/398 (32%), Positives = 214/398 (53%), Gaps = 39/398 (9%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG-- 57 ++LLV PNGSK WRL Y R G + ++LG YP ITL +AR +RDE +K + GVDP Sbjct: 31 LYLLVEPNGSKGWRLDYTRPNGGRNTISLGTYPTITLCEAREKRDELKKQIKKGVDPSLE 90 Query: 58 ----------DKKKNDKVEQSKARTFKEVAIEWHG--TNKKWSEDHAHRVLKSLEDNLFA 105 +K+ + E+ K TF++VA ++ T + + H+ + L LE+++F Sbjct: 91 RKGVKELQREEKEADHAEEERKQNTFEKVARDFFESITIELVPKYHSSK-LARLENHIFP 149 Query: 106 ALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA 165 +G I ++ ++ ++ ++ + ++E A R+ + RYAV L +N ++ Sbjct: 150 YMGNIPIDQVSRLMIIEHLERLKAANKIETARRILNIIEQVYRYAVTHELAPHNIIADID 209 Query: 166 G--AVASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARW 222 + +H P + + I +L+ ID Y G T++A++L +L R +RFA W Sbjct: 210 KRYVIGKKEVRHFPTITDPVEIGKLVRMIDEYPGDISTKYALKLAILTAQRPYNIRFAEW 269 Query: 223 SEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY-GAHDL 281 +E D E +W I E+ KM+ H++P+ Q IL++++ F Sbjct: 270 NEFDLERDVWQISAEK------------MKMKRPHIIPIILQIKTILRELEPFTKNRSQY 317 Query: 282 IFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFR----TMACSSLVESGLWSRDAV 337 +F + +P+SENT+N ALR +GY TK E+ HGFR T+A + E G S D + Sbjct: 318 LFPALTSNVRPISENTMNQALRRLGY-TKEEIVSHGFRAMFSTIANEHIPEHGFHS-DII 375 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 ER ++H +N + AY ++AE+L ERR +++WWA+FLD Sbjct: 376 ERHLAHSEQNKTKGAY-NRAEYLNERRGLIEWWANFLD 412 >UniRef50_Q1QLT5 Phage integrase n=2 Tax=Alphaproteobacteria RepID=Q1QLT5_NITHX Length = 416 Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 133/379 (35%), Positives = 203/379 (53%), Gaps = 13/379 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HL V G K WR +YRY K+K+L +G YP+I+L DAR RD A+ L +G DPG K Sbjct: 30 LHLYVSTAGGKLWRFRYRYADKEKLLTIGPYPDISLVDARAARDAAKASLRDGRDPGVIK 89 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K+ S A TF+ +A EW+ NK +W E HA VL SLE +F LG +A++K Sbjct: 90 KLRKLANVTSTANTFEAIAREWYDLNKGQWVERHADDVLTSLEREVFPVLGNIPVADIKA 149 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++LA ++ +E + E A R++QR +A+ YA+ SG D +PA + A+A + +P Sbjct: 150 PEVLAVLRGIEARAK-ETARRVRQRMSAVFVYAISSGRADADPAATVQKAMAPMVKGRQP 208 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE-IDFEASIWTIP 235 A+ +L E+L K ++ P T+ A+ + L +R L WSE D E +W IP Sbjct: 209 AITDLDAAREMLGKAEAEKAHPATKLALRIIALTVVRPGTLITTPWSEWTDMEDGVWRIP 268 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R + + H+ R H VPLS QAL ++ ++ G + F +H+ MSE Sbjct: 269 AARMKL---RLQHKDDDAR-DHWVPLSRQALEAVEALRTLTGRGPIPFPNTRHAHRTMSE 324 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 N + L GY + HG+R S + E + ++ ++H+ ++ V AY + Sbjct: 325 NAIGYLLNRAGYHHR--HVPHGWRATFSSVMNERFPADKPIIDLMLAHVPKDKVEGAY-N 381 Query: 356 KAEHLEERRLMLQWWADFL 374 +A HLE RR + Q WAD + Sbjct: 382 RALHLERRRKLAQEWADLI 400 >UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9U1_9GAMM Length = 399 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 128/383 (33%), Positives = 199/383 (51%), Gaps = 19/383 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + PNGSK WR YR + KQ++LA+G +++LADAR +A+ + G DP ++ Sbjct: 26 LFLEIRPNGSKLWRYAYRLDSKQRLLAIGSLQDVSLADARAAMRQAKSQVKLGQDPVLQR 85 Query: 61 KNDKV--EQSKARTFKEVAIEWH-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K E+S T E A +W+ G K WS H R + L+ + +G+ I E+ Sbjct: 86 KIAKARSEESALNTVAENAEDWYSGAEKSWSASHRDRARRYLDQRILPDIGKWPIREVTP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 D+L ++ E +G VA +Q +++ +A+ + D +P + A+ H Sbjct: 146 ADVLKLLRKAEKAGP-HVAIVTRQTLSSVFEHAIVNLRADADPTHPVRRAIKKPPVMHAV 204 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 A + +LL +D+Y G +T AIEL L F+R+ ELR A+W+ ID+EA Sbjct: 205 AHSAATMGKLLAGLDTYPGNRVTAIAIELLALTFVRTKELRTAKWANIDWEAE------- 257 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 P +K K R H VPL+ +A+A+L+++++ GA +F D KPMS Sbjct: 258 ---SPLLKIDAGEMKKRRKHWVPLAPRAVALLRELQEITGAGTYLFPNQRDPKKPMSREA 314 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 VN L+ +G D E+ GH FR A + L E+G + V+ Q++H N AAY H A Sbjct: 315 VNMGLKYLGMD---EISGHDFRATASTWLHEAG-YPSAVVDMQLAHAKTNKTGAAYNH-A 369 Query: 358 EHLEERRLMLQWWADFLDVNRER 380 E L +R M+ WAD L ++R Sbjct: 370 EFLPDRIKMMDRWADHLAKQKQR 392 >UniRef50_D0J426 Phage integrase n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J426_COMTE Length = 416 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 132/384 (34%), Positives = 209/384 (54%), Gaps = 13/384 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P GS+ W +YR +GK+ LALG YPE++L AR RD AR + G+DP + Sbjct: 27 LYLEVSPAGSRRWFWKYRKDGKEGRLALGRYPEVSLTAARKARDAARLQKSEGIDPAKAR 86 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K+ A TFK VA+EW+ +WS HA R+ + LE +LF +GER +A+++ Sbjct: 87 KLEKLVNPTGVADTFKAVALEWYEKQVPRWSPGHAERMHRQLERDLFPWIGEREMAQIQP 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-QHR 176 +LLA ++ VE G +E A R + RY + + E A + R + Sbjct: 147 MELLAVLQKVEARGAVETADRALMLARQVWRYWLPTASNTQRDITEGLKARLTPYRGTNF 206 Query: 177 PAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 PA+ E +R ELL + +Y G P R A+ L L++ R LR W+E+D +A++W IP Sbjct: 207 PAIVEPQRFGELLRAMYAYKGGPFVRTALLLAPLLYQRPGNLRMMEWAELDLDAALWKIP 266 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 + +K S + + H+VPL QA+A+L+++ G +F G D +PMS+ Sbjct: 267 SAK-----MKRSVQEKENGEPHVVPLPKQAVAMLRELLPLSGRGRYVFPGQRDHDRPMSD 321 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 N+V +AL +G E HGFR A + LV+ A+E ++H +++ +Y + Sbjct: 322 NSVRTALYSLGVGE--EQSWHGFRASARTMLVDQLDLDPLAIEANLAHAVKDANGRSY-N 378 Query: 356 KAEHLEERRLMLQWWADFLDVNRE 379 + ++L +R +Q WAD+LD RE Sbjct: 379 RTKYLAKRFDQVQQWADYLDRLRE 402 >UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C3XC22_OXAFO Length = 427 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 124/402 (30%), Positives = 213/402 (52%), Gaps = 44/402 (10%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L V P+GSK WRL++ + GK+ L+LG YP+++L R +R+EAR+LLA G+DP + Sbjct: 31 LYLEVLPSGSKLWRLKFQKPSGKESRLSLGAYPDVSLEQVRKKREEARRLLAQGIDPSED 90 Query: 60 KKND---KVEQSKARTFKE------VAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGE 109 +K K EQ R FK+ +A+ + + K + ++D+ + +L+ E +LF A+G+ Sbjct: 91 RKEQKEAKQEQDVIRAFKDDRMFERIAMRLYASKKGRTTDDYRNTMLRQFELHLFPAIGK 150 Query: 110 RNIAELKTRDLLAPIKAVEMSGRLE--------VAARLQQRTTAIMRYA--VQSGLIDYN 159 +NIAE++ R+L KAV S +L +A +L Q + A S N Sbjct: 151 KNIAEIEGRELFTLFKAV--SEKLNSKGKPMTYMARKLCQWAAEVYDLANVENSSFALNN 208 Query: 160 PAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRF 219 P + + + +H + +P+ + +++Y G LT+ AI + L +R + +R Sbjct: 209 PCRSVIKFLPKHQTEHMARIGFTELPQFIQALEAYGGHILTKSAIWMLLYTGMRQTSIRR 268 Query: 220 ARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY--G 277 A+WS+ D IW PE+ + H++PL QA+++LK I+ Sbjct: 269 AQWSDFDLNKGIWNRKPEKVD-------------KNIHIIPLPEQAISLLKDIQLLATGN 315 Query: 278 AHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAV 337 + +L+F MSE + A+ MG+ ++ GHG R++ + L E G R V Sbjct: 316 SENLVFPSVFAGQLKMSEAAIGQAIERMGF----QMTGHGLRSVVSTGLNELGFTPR-LV 370 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 E Q+ H +++ AAY + A+HLEER+ M+Q WA++L+ +E Sbjct: 371 EVQLGHKKGDAIEAAY-NNAQHLEERKKMMQRWANYLNSFKE 411 >UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophilus influenzae RepID=Q4QNN7_HAEI8 Length = 403 Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 123/389 (31%), Positives = 206/389 (52%), Gaps = 37/389 (9%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L++ P GSK WR Y K+ ++LG+YP ITL+ AR R++ R+LLAN +DP + Sbjct: 31 LFLIISPTGSKSWRFNYYRPITKKRAKISLGLYPAITLSKARELREQYRQLLANKIDPQE 90 Query: 59 KKKNDKVEQ--SKARTFKEVAIEWHGTNKKWSEDHAHRVLKS----LEDNLFAALGERNI 112 K ++ Q + TF ++ +W KK SE + LKS LE F LG+ I Sbjct: 91 YIKQHELLQLQRQNNTFFAISTQWK--QKKVSEIKS-VTLKSRWRTLEKYAFPYLGDNPI 147 Query: 113 AEL---KTRDLLAPI--KAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA 167 AE+ + D + P+ + V +G+L +A IM +AV G+I++N ++ A Sbjct: 148 AEITPQQLHDTVIPLFERGVSHTGKLVIAL-----VNEIMNFAVNKGIIEFNKCINVSKA 202 Query: 168 VASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDF 227 H P + +++PE ++ + + ++ IE +LL R SE A+W+EIDF Sbjct: 203 FNVNRTTHHPTIRPEKLPEFMSALRHSHIDLMVKYLIEFSLLTITRPSEAANAQWNEIDF 262 Query: 228 EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH 287 E S+W IP ER KM+ +PLS Q L IL ++K G IF Sbjct: 263 EKSLWNIPAER------------MKMKKAFTIPLSLQVLKILNKLKNISGRSRFIFQSQR 310 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-WSRDAVERQMSHMAR 346 +P+ ++ N+A++ +GY K ++ HG R++A + L E+ + + +E +SH ++ Sbjct: 311 YPERPLHSSSANAAIKRVGY--KDQLTSHGLRSIASTYLSETFTEMNLEILEACLSHQSK 368 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLD 375 N VR AY +++ +LE+R+ ++ W DF++ Sbjct: 369 NQVRNAY-NRSTYLEQRKPLMNAWGDFVE 396 >UniRef50_A5PCI3 Phage integrase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCI3_9SPHN Length = 325 Score = 189 bits (480), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 111/313 (35%), Positives = 177/313 (56%), Gaps = 20/313 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G++ WR+ YRY GKQK L G +P + LADAR + D AR++LA G DPG++ Sbjct: 26 LYLEVSPTGARSWRMNYRYLGKQKTLTFGRWPAVGLADARKKCDAAREVLARGDDPGEQA 85 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKS---LEDNLFAALGERNIAEL 115 K +++ + A +F+ VA E+ +K E + +K L + ++G+R I+ + Sbjct: 86 KLERIAASVASASSFEAVAEEYLAKIEK--EGRSSVTMKKKRWLIGFIDKSIGKRPISAI 143 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 +LL ++ +E G+ E A RL+ + I RYA+ +G + + ++ GA+ H Sbjct: 144 SAPELLLTLRKMEKKGKYETARRLRSTCSQIFRYAIATGRAERDVTVDLRGALIVPKAVH 203 Query: 176 RPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 RPA+ + ++ LL I+S+ G P T+ A++L +F+R ELR A W+E D +A++WTI Sbjct: 204 RPAITDASKVGGLLRSIESFDGHPTTQIALKLVPHVFVRPGELRHAEWTEFDLDANVWTI 263 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E+ +KMR H +PLS Q L I+ I+ +F +PMS Sbjct: 264 PAEK------------TKMRRPHAIPLSRQTLEIIASIEHDADYSRFLFPSLRSVQRPMS 311 Query: 295 ENTVNSALRVMGY 307 ENT+N+ALR MGY Sbjct: 312 ENTINAALRRMGY 324 >UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria RepID=Q5P707_AZOSE Length = 415 Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 124/378 (32%), Positives = 189/378 (50%), Gaps = 20/378 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P+G+K+WR ++R KQ M ALG YP + L DAR RDEAR+L+ G++P + Sbjct: 25 LCLEVRPSGAKFWRYRFRLADKQNMHALGEYPAMGLQDARRARDEARELVRKGINPSHHR 84 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 +K E+ + TF+ V EW N+ WS ++ +V + ++F +G+ IA+LK Sbjct: 85 GLEKAERILALGSTFETVTAEWIERNRPDWSANYIRQVRARMAGDVFPEIGQYPIADLKA 144 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LA ++ VE + AA ++ + R+AV L + +P + AV H Sbjct: 145 AHVLAMLRKVEKRSPTQ-AALVKTWVGGVFRFAVVEQLREDDPTFPLRRAVKPTQVNHHA 203 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L I L I + G + A+ L R +E+ ARW+ ID +A +WTIPP Sbjct: 204 ILRNDEIGAFLRAIAAAPGEVTVKEAVGLMWATACRINEVTGARWAGIDLDAGLWTIPPG 263 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K + H+V L+ QA+ IL++++ G + +F D +PMS Sbjct: 264 R------------MKAKQEHVVTLTRQAVEILRRVQVHTGTLEHVFPHRSDRKRPMSGEA 311 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 V R GY K HG R S++ W D +E ++H RN +R AY H A Sbjct: 312 VRDLFRRAGYAGK--FTPHGVRGT-FSTIANGAGWRADVIELCLAHQERNQIRRAYNH-A 367 Query: 358 EHLEERRLMLQWWADFLD 375 + L+ERR +LQWW D D Sbjct: 368 QLLDERRELLQWWGDLSD 385 >UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombinase phage integrase family protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF6377 Length = 393 Score = 188 bits (477), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 118/380 (31%), Positives = 200/380 (52%), Gaps = 24/380 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P G+K WR ++R GK+ A+G YP+++L+DAR RD AR+L+ G +P + Sbjct: 26 LFLEVTPGGNKLWRYRFRLAGKENTYAIGSYPDLSLSDARAERDAARELVKLGRNPAHVR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKKWSE---DHAHRVLKSLEDNLFAALGERNIAEL 115 + K +Q + TFK VA EW K+ + + ++ ++ ++++ +G + E+ Sbjct: 86 QTVKAQQLSENSNTFKVVAEEW--IEKRLANRTLKYRDQIRRAFVNDVYPKIGRFPLREI 143 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 +L I ++ +A ++Q +++ Y V + D +PA + GA++ + H Sbjct: 144 TAAQILVIITQMDKRDATTLALMVRQWISSVFCYGVVTLRADSDPAAAVRGAISRKDVNH 203 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 + L+ + E + Y G T A+ L L+F+R+ ELR A WSE D + +IW IP Sbjct: 204 SRPMNLEELAEYFLAVGKYGGHRGTVIALYLLPLLFVRTVELRLAEWSEFDLDKAIWIIP 263 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R K + H+VPL +A+A+L++++ A +L+F G +P+S Sbjct: 264 SGR------------MKRKRPHMVPLPERAIALLRELRSL-TAGNLLFPGMKHPSQPISA 310 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T+N AL M D + C H FR A + L ES LW +A+E Q+SH + +AAY H Sbjct: 311 TTLNRALEYM--DLRGWHC-HDFRATASTHLYESQLWRSEAIEMQLSHKESDKTKAAYNH 367 Query: 356 KAEHLEERRLMLQWWADFLD 375 A++ +ER M+ WW L+ Sbjct: 368 -AKYWDERSKMMVWWGHRLE 386 >UniRef50_C7HXY0 Integrase family protein n=1 Tax=Thiomonas intermedia K12 RepID=C7HXY0_THIIN Length = 392 Score = 187 bits (475), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 126/390 (32%), Positives = 198/390 (50%), Gaps = 42/390 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WR Y GKQ+ G YP +TLA AR +A+ P + Sbjct: 26 LYLFVAPTGLKSWRANYELNGKQRTRTYGRYPAMTLAQAREAHTQAKS------TPAEAA 79 Query: 61 KNDKVEQSKARTFKEVAIEW------HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 + + A TFK + +W +N K H +V +LE + A+G+ I + Sbjct: 80 TVTPIAKV-APTFKAITEQWLKIKLPSLSNGK----HQGQVAGTLERFAYPAIGKLPIDQ 134 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 + L+ ++AV+ GR+E A R+ R A+ YA G I+ + A + V + Sbjct: 135 IPRTKLVEVVQAVQKGGRVETAHRVAGRIAAVFDYAQDVGYIESHGAAGLV-RVLQPRKV 193 Query: 175 HRPALELKRIPE-----LLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 +P + IP LL ID Y P+TR ++L L F+R E+R RWSE+ + Sbjct: 194 KKP---MASIPPGEAGALLAAIDGYE-EPVTRLGLQLLALTFVRVGEMRGMRWSELREDG 249 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 ++W +P +R K H+VPLS QA A+L+Q++ G +L+ Sbjct: 250 TVWVVPADR------------MKAGLPHVVPLSQQARAVLEQLRVLTGDRNLVLDSPLRP 297 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 +SENT AL +GY + + HGFR +A + L E ++ D +ERQ++H ++V Sbjct: 298 GHALSENTFLFALYRLGYRGR--MTAHGFRALASTVLNEQSGFAHDVIERQLAHRETDTV 355 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 RAAY ++A++L++RR ++QWWAD+LD RE Sbjct: 356 RAAY-NRAQYLDQRRGLMQWWADWLDRQRE 384 >UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_PSEA7 Length = 395 Score = 187 bits (474), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 126/378 (33%), Positives = 197/378 (52%), Gaps = 19/378 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V PNG K WR +++ GK ALG YP ++LADAR + +EARKL+ G++P + Sbjct: 25 LYLEVKPNGVKAWRYRFKLAGKGSWFALGDYPSVSLADARDKCEEARKLVKQGINPVQNR 84 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + +++ EQ A TF+ VA EW K W E R L L+ +F ++G+ + ++ Sbjct: 85 QVERIKREQDSANTFEAVAKEWLAL-KDWEEVTKRRRLDMLQRVVFPSIGKMPVRQITPA 143 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 +L + G VAA ++ + I AV + D +P + A+ + QH+ A Sbjct: 144 HVLDILSKTAKRGAPTVAAEAKRTMSGIFELAVATLRADNDPVWPVRKALPANKTQHKTA 203 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L +I +LLT D++ + I+L R E A W+E D + ++W+IP R Sbjct: 204 LTTAQIGKLLTDFDNHRCGYQVNFCIQLMWWTLARPGEAAEAEWAEFDLDKALWSIPARR 263 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K R HLVPL QA+ +L+++ G +F G D +KPMS +++ Sbjct: 264 ------------MKARREHLVPLPRQAVEMLRRLHAISGDRMHLFPGRDDRNKPMSAHSI 311 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 AL+ +G+ HG RT + L E G + DA+E Q++H NSVR Y H A Sbjct: 312 RQALKALGWSG--TYSPHGTRTTGSTRLNEMG-YRPDAIEAQLAHAEPNSVRRTYNH-AT 367 Query: 359 HLEERRLMLQWWADFLDV 376 +L+ERR M+Q WAD L++ Sbjct: 368 YLDERREMMQAWADKLEL 385 >UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F555_HAEPS Length = 405 Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 120/384 (31%), Positives = 192/384 (50%), Gaps = 27/384 (7%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + LLV GSK WR Y K+ +ALG+YP + L+ AR RDE +KLLA+ +DP Sbjct: 31 LFLLVSITGSKSWRFNYYQPITKKRTKMALGMYPTVNLSKARALRDEYKKLLADDIDPQQ 90 Query: 59 KKKNDKVE--QSKARTFKEVAIEWHGTNKKWSEDHAHRVLKS----LEDNLFAALGERNI 112 KN + E Q TF +A +W +K S + LK+ LE F LG +I Sbjct: 91 YIKNKQQEKLQETQNTFLAIAEQW---KQKKSAEIKPATLKNHWRRLELYAFPTLGNISI 147 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 +K + + + + G L Q IMR+AV G+I++N ++A Sbjct: 148 TMIKPLQVTELVTPLFLRGVNSTGVLLLQTINEIMRFAVNRGIIEFNKCADIADTFVKSK 207 Query: 173 RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 +H P + + +PE + + + + IE +LL R SE A+W+EIDFE S+W Sbjct: 208 SEHHPTIRPEHLPEFFAALRNSHADLIIKSLIEFSLLTIARPSEAANAKWAEIDFEQSLW 267 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 IP ER KM+ +PLS QA+ ILK+++ G IF +P Sbjct: 268 NIPAER------------MKMKQPFTIPLSIQAVKILKKLQVITGRSLYIFQSIKKPSQP 315 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-WSRDAVERQMSHMARNSVRA 351 + + N+ ++ MGY K + HG R++A + L E + + + +E +SH ++N VR Sbjct: 316 IGKQIANNTIKQMGYKGK--LTSHGLRSIANTYLSEKFIDLNVEIIEACLSHKSQNQVRN 373 Query: 352 AYIHKAEHLEERRLMLQWWADFLD 375 AY +++ +LE+R+ ++ W F++ Sbjct: 374 AY-NRSTYLEQRKPLMNDWGQFVE 396 >UniRef50_C8Q072 Phage integrase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q072_9GAMM Length = 402 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 120/380 (31%), Positives = 199/380 (52%), Gaps = 26/380 (6%) Query: 3 LLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD-- 58 L V +G+K W LQY + K+ M+ LG YP + LADAR +++ ++LL+ +DP Sbjct: 33 LNVASSGTKTWYLQYSKPFTKKKDMVNLGRYPTVNLADARKQKNYCQELLSKDIDPKTHF 92 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLED---NLFAALGERNIAEL 115 +++ + E FK V EW T K +A + ++ +E+ + A +G + + ++ Sbjct: 93 EEEARRKEYEHRTDFKSVFEEWLPTKK-----YAPKTVEKMENYIKEMLAVIGNKPVNQV 147 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 T D + +K VE +G L +++ + + YA+ +G NP + G + H Sbjct: 148 TTEDCMRVLKPVESAGHLTKLEKMRSMMSQTIAYAIATGRAKENPCIHLRGVFMTPETTH 207 Query: 176 RPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 PA L+ + L+ I SY G TR A+ +++F R E+R +W +IDFE + W Sbjct: 208 APAILDEAGLTRLVQSIYSYHGHFATRKALLFAIIMFARPGEIRHLKWQDIDFEYNNWQY 267 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P + G M + PL TQA+ ILK++K + A +L+F + + +P+S Sbjct: 268 TPNK------TRKSTGVSM----MSPLPTQAVEILKEMKAYKNA-ELVFPSSNSTSRPLS 316 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 ENT+N ALR MG++ E GFR +A + L E + +E Q+ H R+S AY Sbjct: 317 ENTLNQALRRMGFEN-TEQTSQGFRAIARTVLEEKFKYDYRWIELQLGHQVRDSNGRAY- 374 Query: 355 HKAEHLEERRLMLQWWADFL 374 ++ + L+ERR M+Q WAD+L Sbjct: 375 NRVQWLDERREMMQKWADYL 394 >UniRef50_B5J5X2 Site-specific recombinase, phage integrase family protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J5X2_9RHOB Length = 383 Score = 181 bits (459), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 125/390 (32%), Positives = 211/390 (54%), Gaps = 29/390 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP---- 56 M L V P+G K +RL YR G Q+ +G YP +LADAR++ A +L N DP Sbjct: 1 MFLEVLPSGRKVFRLAYRLAGNQRTKLIGDYPATSLADARLKA-SAFRLDLNSSDPEIVE 59 Query: 57 --GDKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNL---FAALGERN 111 ++ ++ + T+KEVA + ++ + A + L+ L + ALG Sbjct: 60 VATRPRQTVTTKKRQTTTWKEVADGYLMMRQQ--SNPAPKTLRKLNYQIGVTVDALGNPR 117 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC 171 + E+ +D+L + + SGR+E A ++ R + I RYA GL+ ++PA A+ Sbjct: 118 VDEITAQDILDVVNPIASSGRVETAHEIRARFSQIFRYAGARGLVTHDPAAFTIDAMIKR 177 Query: 172 NRQHRPAL-ELKRIPELLTKIDSY-TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 R + + + +LL I+SY P+ A+ L+ +F R++ELR RW EID+++ Sbjct: 178 RRGEFAGITDPAAVGKLLHAIESYREANPIVGAALMLSAYLFPRNTELRGMRWDEIDWDS 237 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 W +P +R KM H+VPL +QA+ +L+ ++++ +L+ D Sbjct: 238 LRWEVPGQR------------MKMNRDHIVPLPSQAIDLLRFLQKYDFGSELVLPSPRDP 285 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 + +S+ T N+ALR MG+ + V HGFRT A ++L E G W+ D +ERQ++H+ N V Sbjct: 286 KRMVSDMTFNAALRRMGFKSDRHVH-HGFRTTASTNLNEMG-WNYDWIERQLAHVPANKV 343 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 R++Y +KA++L+ R M++ +AD+LD R+ Sbjct: 344 RSSY-NKAQYLDGRTEMMRAYADWLDARRQ 372 >UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteriaceae RepID=B7N6K6_ECOLU Length = 415 Score = 180 bits (457), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 120/385 (31%), Positives = 198/385 (51%), Gaps = 24/385 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LLV +G K W +Y + K+ +LG YP +TLA AR R + R+LL G+DP Sbjct: 31 LYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMARETRTKYRRLLWQGIDPRQ 90 Query: 59 KKKNDKVEQ--SKARTFKEVAIEWHGTNKK---WSEDHAHRVLKSLEDNLFAALGERNIA 113 E+ T ++VA +W K+ SEDHA V +SLE ++F +LG + Sbjct: 91 HLAGIAEEKRLQNECTLEKVAEQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGSTPVT 150 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 E++ + L + +E G LE R+ R I R+A+ LI++NPA + + Sbjct: 151 EIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKK 210 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 Q+ PAL + L+ + + + R TR IE LL ++R E ARW +ID + + W Sbjct: 211 QNMPALPPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWR 270 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP KM +H VPLS QAL +L+ ++ +F + M Sbjct: 271 IP------------DTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHM 318 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 + T N+AL MG+ E+ HG R++A ++ +G + R+ +E ++H + + AAY Sbjct: 319 HQQTANAALIRMGFGG--ELVAHGMRSIARTA--GAGHFPREVLESALAHQKEDEIEAAY 374 Query: 354 IHKAEHLEERRLMLQWWADFLDVNR 378 +++++LE+RR ++QWW +++D R Sbjct: 375 -NRSDYLEQRRPLMQWWGNYVDAAR 398 >UniRef50_A1SRI6 Phage integrase family protein n=2 Tax=Alteromonadales RepID=A1SRI6_PSYIN Length = 416 Score = 180 bits (456), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 116/382 (30%), Positives = 194/382 (50%), Gaps = 25/382 (6%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L + PNGSK W+L++ E K ++ G YP I+LA+AR R+ A +LLA G++P Sbjct: 30 LQLRIKPNGSKLWQLRFNKPIEKKPALMGFGAYPAISLANARKLREAANELLAQGINPKA 89 Query: 59 KKKNDKVEQSKA--RTFKEVAIEWHGTNKKWSE---DHAHRVLKSLEDNLFAALGERNIA 113 ++ ++ E+ TF+ V W K SE D + +L +++ +G+ I Sbjct: 90 QRDSEIKEKELILNNTFEMVTAAW--IKLKASEVKPDSLKTISTTLTNHILPRIGKCPIT 147 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 E+ + ++ +E G EV AR Q IMRYA G+I NP + G + Sbjct: 148 EITAPMAIEALRPIEAKGNHEVIARACQYLNQIMRYATNLGMIHSNPLTGIKGVFMTKKI 207 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 + P ++ + +P+LL I + + +TR I L R +E A+W+EID+E ++W Sbjct: 208 TNNPHVKPEELPQLLMAIATANIKKITRNLILWQLHTMTRPAETALAQWNEIDYENNLWI 267 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP ER K TH +PL+ Q LAIL+ K G D IF D + + Sbjct: 268 IPGER------------IKTGMTHQIPLTVQTLAILEACKVISGNSDYIFPADRNPNAHA 315 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 ++ + N A + MGY + HG R +A ++L + G+ + + E +SH NSV +Y Sbjct: 316 NKASANMAFKRMGYQGR--QTAHGLRGLARTTLSDKGV-AYEPSEACLSHKVGNSVSQSY 372 Query: 354 IHKAEHLEERRLMLQWWADFLD 375 H + +L +R ++ WW+++++ Sbjct: 373 NH-STYLNQRIKIMAWWSNYIE 393 >UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_ACIB5 Length = 427 Score = 179 bits (453), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 124/395 (31%), Positives = 206/395 (52%), Gaps = 25/395 (6%) Query: 1 MHLLVHPNGSKYWRLQYR-YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP--- 56 ++ V P+G K W +Y+ +GK L +G YPE++ A AR + E K ++ G +P Sbjct: 52 LYFRVKPDGKKAWLFRYKKADGKWSWLGIGTYPELSGAGARKKAREIIKDISQGDNPIIT 111 Query: 57 GDKKKNDKVEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++K ++EQ+ A TF+ +A EW T W +D R +LE ++FA G+R + Sbjct: 112 KQERKRQELEQNNA-TFEVLAREWLDTKANTWVKDTMTRNKGALEKHIFAIFGKRLYTSI 170 Query: 116 KTRDLLAPIKAVEM-SGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 K + + +K ++ G E R++ I +A +G IDYNP + + + +Q Sbjct: 171 KPIEWMNHLKGIQQHQGIYEQVNRVRAMCRDIYDFAKVTGRIDYNPLEGLQKFLQQGVKQ 230 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 + + + +P LL I+SY + R ++L ++F R +ELR A+W E D IW I Sbjct: 231 NMSHVSEQELPALLRAINSYPTMDV-RMGLQLLAMLFCRPTELREAKWQEFDLNQGIWNI 289 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P ER K R H+VPL QA+ IL ++K + + +F D KP S Sbjct: 290 PAER------------MKKRREHVVPLPRQAITILNELKTYETNSEYLFPSRSDKSKPKS 337 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 + ALR MGY+ + HGFR +A + L G R +E ++H+ ++ V Y Sbjct: 338 DTVFIMALRRMGYEGR--QTPHGFRHIASTLLNNRGFDERH-IEAALAHV-KDGVAGVY- 392 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFISPFEYAK 389 +KA++L++R++MLQW+A+ L+ ++ I F+ AK Sbjct: 393 NKAQYLDDRKIMLQWYANHLEEIADQRIIQFKKAK 427 >UniRef50_D0SUB2 Predicted protein n=2 Tax=Acinetobacter RepID=D0SUB2_ACILW Length = 396 Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 115/373 (30%), Positives = 196/373 (52%), Gaps = 28/373 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L++ G KYW ++ G++K +LG YP+++L AR E + + V D K Sbjct: 42 LSLIITTKGQKYWNVRVTVHGERKSESLGPYPDLSLKKARELAYELKHRYSRSVLHEDLK 101 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 F+EVA +W K+ WS H V SL D L+ AL + I +++ + Sbjct: 102 P----------YFEEVAEDWFNNQKETWSSKHISNVRASL-DELYIALANKRINQIQAPE 150 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +L IK +E G LE+A R R +M+YA+ G NPA ++ A+ + ++ +L Sbjct: 151 ILQIIKKIEARGSLEIAKRTLSRCGMVMKYAIAHGYRYDNPAGDLVYALKNKRVKNLASL 210 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 +PE L +I +Y T AI L +L +R SEL ARW E D E W IP ER Sbjct: 211 SASEMPEFLRRIKAYPADAQTHHAIVLIMLTGVRVSELLQARWEEFDLEGRKWDIPEER- 269 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 K R +H VPL+ +A L+ ++ + +L+F ++ +PM ++ Sbjct: 270 -----------MKNRLSHRVPLTDMMIAELQALRLTHN-QELLFPHRLNNKEPMRSESIL 317 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 + ++ GY + + HGFR++ + + ES L++ DA+ERQ++H+ +N +R+AY ++A++ Sbjct: 318 AVIKRSGYAGR--MTTHGFRSLFSTVVNESNLFNPDAIERQLAHVPQNRIRSAY-NRAQY 374 Query: 360 LEERRLMLQWWAD 372 +ER ++QW+ + Sbjct: 375 WDERVRLMQWYGE 387 >UniRef50_C0VMY9 Integrase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMY9_9GAMM Length = 429 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 123/389 (31%), Positives = 193/389 (49%), Gaps = 29/389 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQK--MLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LL+ +KYWR+ YR QK LA+G YP I+L AR +RDE +K+LANG+DP + Sbjct: 34 LYLLIDETEAKYWRMDYRRPVTQKYNTLAIGTYPTISLEQARSKRDEFKKMLANGIDPAE 93 Query: 59 KKKNDKVEQSKA--RTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 ++ N K EQ + TF + A EW +K H ++ L ++ +G+ +AEL Sbjct: 94 QRNNKKREQLQTLENTFSKFAAEWLDI-RKHEGKVDHETIRKLNRDILPFIGKLPVAELT 152 Query: 117 TRDLLAPI-KAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 T L + A+ G LE A R++ +++ ++ +I YNPA ++ + H Sbjct: 153 TEQLERDVTDALVERGALESARRIKSIINMVLKLPLKRRIITYNPAPDIILPQPTKG-NH 211 Query: 176 RPALELKRIPELLTKI-----DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 + K + +LL K D R T AI+L+ I+ R E+R W +DFE Sbjct: 212 NAVTDEKELADLLRKTWRLTKDFPRTRIRTELAIKLSAYIYQRPGEVRTLLWESVDFENR 271 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 S SK H+VPLS QA ILK++++ +F S Sbjct: 272 CL--------------SFAASKTNQDHIVPLSIQAYDILKELEELRTTSKYVFPSVKTSS 317 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 + MS +T+ L+ +G+ K + HGFR A + L E + D VE Q++H ++ Sbjct: 318 ECMSTDTLTQVLKRLGF--KGKHTAHGFRATARTLLDEEIEYRTDIVEHQLAHKVKDPNG 375 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDVNRE 379 AY ++ + L RR M+Q WAD+LD R+ Sbjct: 376 TAY-NRTKFLRRRREMMQLWADYLDTLRQ 403 >UniRef50_Q0I4P6 Integrase n=14 Tax=Pasteurellaceae RepID=Q0I4P6_HAES1 Length = 418 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 118/384 (30%), Positives = 198/384 (51%), Gaps = 27/384 (7%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LLV GSK WR Y K+ ++LG YP+++LA AR R++ R LLA +DP + Sbjct: 37 LYLLVKATGSKLWRFNYYKPLTKKRTEMSLGAYPDVSLAQARELRNQYRSLLAQDIDPNE 96 Query: 59 KKKNDKVEQSK----ARTFKEVA---IEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERN 111 ++N V+Q+K T++ VA E+ T K +SE + V ++ L G Sbjct: 97 HRQN--VKQAKLDEINNTYEAVAWAWFEYRQTKKNFSEGYKKDVASLIKRCLLPHFGSLP 154 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC 171 I+++ L K + G LE R Q+ IM +A+ LI +NP ++ S Sbjct: 155 ISQITAPMALKAFKQYQDEGTLEKLKRTIQKHNEIMNFALHRDLISFNPTANISKEFDSP 214 Query: 172 NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 +H ++ + +PE + +++ TR+ I LL R +E AR+ +ID ++ + Sbjct: 215 TVEHFKTIQPEDLPEFMYTLNNAQINLRTRYLILWQLLTMTRPNEAAKARYEDIDEKSRL 274 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 WTIP E + RG H + LS QA+A+L++IK+ G +F Sbjct: 275 WTIPAE--------NMKRG----IAHKITLSRQAMALLREIKKLSGGKTYLFPNVKYPQT 322 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 ++ T N+A++ MGY K + HG R++A + L E G ++ + +E +SH+ + ++A Sbjct: 323 HVNTQTANAAIKRMGYQGK--LVAHGLRSIASTYLNEKG-YNSELIEVALSHINSDRIKA 379 Query: 352 AYIHKAEHLEERRLMLQWWADFLD 375 AY + E LE+R +LQ WADF++ Sbjct: 380 AY-DRGERLEQRFKLLQVWADFVE 402 >UniRef50_UPI0000E0F7C9 site-specific recombinase, phage integrase family protein n=2 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0F7C9 Length = 374 Score = 176 bits (446), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 123/378 (32%), Positives = 190/378 (50%), Gaps = 39/378 (10%) Query: 1 MHLLVHPNGSKYWRLQYR-YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L V +GSK WR +Y+ + G M ALG YP+I+L AR D+ Sbjct: 25 LYLEVTKSGSKNWRYRYKNHTGSWTMKALGSYPKISLEKARALLDDL------------- 71 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 + V + K +FKE A EW S + H V + +E+ L LG IA +K +D Sbjct: 72 ---EVVAEYKCISFKETASEWLVYKGYTSYKNKHLVHRRIENYLLPKLGNMTIANIKPKD 128 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +L +K +E G LE+A R+Q + I +Y VQ+ + NPAQ + G + +H PA+ Sbjct: 129 ILPILKQIEAKGHLELARRVQNILSQIFKYGVQNLYCETNPAQPLQGCTKQPSVRHMPAI 188 Query: 180 -ELKRIPELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 E LL IDS + P + ++L +F+RS +R A+ IDF+ +W IP + Sbjct: 189 VEQSEFARLLATIDSASNLMPSVKLCLQLAPHVFLRSQSIRMAKPEHIDFDRKLWVIPKD 248 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQ-IKQFYGAHDLIFIGDHDSHKPMSEN 296 KM H +PL+ + +L+ I Q G + +F G + P+SEN Sbjct: 249 --------------KMGREHWIPLTEPVIEMLQTAIAQTNG--EYLFNGI-KPNSPLSEN 291 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+N ALR +G D + V HGFR+ + E D +E Q+ H+ N V+AAY + Sbjct: 292 TLNHALRSLGVDKQTHVF-HGFRSSFSTLAREHCRLPGDLIELQLGHIEGNQVKAAY-DR 349 Query: 357 AEHLEERRLMLQWWADFL 374 ++ LEERR ++ W+ +L Sbjct: 350 SQRLEERRELMDKWSKYL 367 >UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJJ0_ACIJU Length = 406 Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 120/388 (30%), Positives = 205/388 (52%), Gaps = 24/388 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V P G K WRL+Y K+ ++LG YP ++LA+AR +++E + LL +G++P +K Sbjct: 25 LYIEVRPTGKKVWRLKYTLHSKEGTISLGEYPSVSLAEARKKKEEIKVLLKDGINPVQEK 84 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + E + + TFK +A E+ K+ S+D+ + +S+E +++ A+G + I E+ + Sbjct: 85 RKLHQENLIANSNTFKAIAEEYIVEGMKYKSKDYIDQFKRSMEKDIYKAIGHKPIREVTS 144 Query: 118 RDLLAPIK-------AVEMSGRLEVAARLQQR--TTAIMRYAVQSGLIDYNPAQEMAGAV 168 D+L+ +K + G E AA Q R + +M+YA+ + + +P + A+ Sbjct: 145 ADILSILKNTITRVRKLSHYGTGEAAAN-QNRLFISLVMKYAIVTLRAENDPTYAVKNAI 203 Query: 169 ASCNRQH-RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDF 227 S +H RP + +RI L T+++ Y G R A + +R+SE+R +WS +DF Sbjct: 204 ESPETEHARPLDKDERI-RLRTRLELYGGTTTVRNACLAMMYTMLRASEIRRMQWSYVDF 262 Query: 228 EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH 287 E + P + R +K HLVP+S Q A+LK+ + +F Sbjct: 263 EERLIEFPKASRR----RKQERSNKKNHIHLVPMSDQLFALLKEQFEISQYQTYVFSAPF 318 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 + + ++ T+N AL +G EV H FR A + L E G + D + +Q++H+ N Sbjct: 319 KNDEMLARTTLNRALVFIGMP---EVTTHDFRATASTLLNEKG-YKPDWINKQLAHVEEN 374 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLD 375 RA Y H A++LE RR MLQ WAD +D Sbjct: 375 KTRATYNH-AKYLESRRKMLQDWADIVD 401 >UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepID=Q5E028_VIBF1 Length = 399 Score = 176 bits (445), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 116/382 (30%), Positives = 202/382 (52%), Gaps = 23/382 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKM--LALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V P G+K W+ ++ +K+ +ALG YPE++LA+AR + E R LLA ++P Sbjct: 31 LQLRVRPTGAKSWQFKFSDPVTRKIQKIALGPYPELSLANARSKTTEYRTLLAQKINPKS 90 Query: 59 KKKNDKVEQSKART--FKEVAIEWHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAEL 115 +++ ++E + +T F VA +W K+ S H++R ++LE +F + + +A + Sbjct: 91 FEQSKELEAKRVQTSTFIVVAEQWFERKKETVSPAHSYREWRTLEKYIFPHMSKIPVATI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + + ++ +E G+ R+ Q IM Y+V GLI NP ++ H Sbjct: 151 TAVETIDVLRPLEKEGKYSTVKRICQSLNQIMDYSVNHGLIHANPLAKIIKVFRKNTVLH 210 Query: 176 RPALELKRIPELLTKIDSY-TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 P + +++P+ L ++ S T + T+ I L R E RW +ID E +WTI Sbjct: 211 MPTIRPEQLPDFLKRLHSCSTIQTKTKLLILWQLHTMTRPKEAATTRWIDIDLEKGVWTI 270 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E K R H +PL++QA+ IL QI+ D +F G+ D + +S Sbjct: 271 PAE------------NMKRRKEHRIPLTSQAINILNQIRLQSKRCDYVFPGERDINSHVS 318 Query: 295 ENTVNSAL-RVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 T N+A+ R +G K E+ HG R +A ++L E G S +E +SH +N VRA+Y Sbjct: 319 LFTANAAIKRSLGL--KDELVAHGLRAIASTALHEYGFDSL-LIEACLSHADQNEVRASY 375 Query: 354 IHKAEHLEERRLMLQWWADFLD 375 +++++LE+R+ ++ WW++++D Sbjct: 376 -NRSDYLEQRKEIMCWWSNYID 396 >UniRef50_Q4QL03 Prophage CP4-57-like integrase n=11 Tax=Haemophilus RepID=Q4QL03_HAEI8 Length = 419 Score = 175 bits (444), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 118/386 (30%), Positives = 200/386 (51%), Gaps = 23/386 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + LLV NGSK WR QY K+ +++LGVYPEI+L DAR RD R LLA +DP D Sbjct: 35 LFLLVKMNGSKIWRFQYYKPISKKRTLISLGVYPEISLKDAREIRDLYRSLLAKNIDPQD 94 Query: 59 KK--KNDKVEQSKARTFKEVAIEWHGTNK------KWSEDHAHRVLKSLEDNLFAALGER 110 + + K Q + T E+ EW K + E + K LE +LF LG Sbjct: 95 YRLQQEQKAIQERQFTLSEMGKEWLYLKKNEVDTGRLKEVTFIDIGKRLERHLFKVLGHY 154 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 +I+E+ + +K +E +G+L+ R+ IM Y+V G+I+YN ++ Sbjct: 155 SISEISAPLAIEKLKPLERAGKLDTLHRIIGYLNQIMIYSVNRGVINYNATADIGRVFIR 214 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 ++ P + +++P+L + + T TR A+EL LL R+ + W +DFE S Sbjct: 215 PIAENNPTIRPEQLPKLFEDLQNSTLEIETRCALELLLLTAGRAGAITQLEWENVDFENS 274 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD-LIFIGDHDS 289 + IP E K R K++ ++PLS QA+ IL+ +++ + +F + Sbjct: 275 LLNIPKE-------KMKGRQGKVQ-DFILPLSKQAVTILRLLQKLNRCNSKFVFPSKKNP 326 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 +P+S+ T N AL +GY + HG R++ +++ E+ ++ + +E ++H +SV Sbjct: 327 RQPISKETPNKALGRIGYRNI--LTAHGLRSVFSTAMNEAE-FNSEIIEVCLAHFEYSSV 383 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLD 375 R Y +KA+++ +R +QWW +F++ Sbjct: 384 RGTY-NKAKYMPQRIEYMQWWGNFVE 408 >UniRef50_A3UDD1 Symbiosis island integrase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UDD1_9RHOB Length = 406 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 118/377 (31%), Positives = 197/377 (52%), Gaps = 23/377 (6%) Query: 5 VHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDK 64 V P G +YWR +YR+ GK +M+ LG YP ++L AR +RD R+LL G++P +++ + Sbjct: 30 VTPKGDRYWRFRYRFNGKAQMMGLGRYPSVSLKKARSKRDHYRELLDEGLNPSLERQTRQ 89 Query: 65 VE--QSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERN---IAELKTRD 119 E Q + +F +A E+ K+ +E A LK L L L + I E+ Sbjct: 90 QELAQLEQSSFGSIATEF--LRKRETEGAAPATLKKLRALLRLLLPDLAPLPIQEITAPQ 147 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 LL ++A E G+ VA + I RYA+ +G + +P+ + A+ + + A+ Sbjct: 148 LLQVLRATESRGKHVVATEARALAGRIFRYAIATGRCEQDPSYMLREALVTPRVKGYAAI 207 Query: 180 -ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 E + LL +I++Y G L + + L F+R +LR A+W + D EA++W P +R Sbjct: 208 REPEAFGALLARIETYEGDTLIKNGLLLLAHTFVRPGQLRLAQWEDFDLEAALWRAPADR 267 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 +KM H+ PLS+Q + ++K++ + L+ P+S+ T Sbjct: 268 ------------TKMSRFHITPLSSQVVCLIKEMHRNKADDTLVMGSRVKPGHPISDMTF 315 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 N ALR +G V V HGFR A + L E ++ D +ERQ+ H+++N +R Y + A+ Sbjct: 316 NKALRSLGVMGDVHVA-HGFRKSASTMLNEQE-YNYDWIERQLDHVSQNRIRGIY-NAAQ 372 Query: 359 HLEERRLMLQWWADFLD 375 +L+ R M+Q W+D+LD Sbjct: 373 YLQGRTRMMQEWSDYLD 389 >UniRef50_A1WP11 Phage integrase family protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WP11_VEREI Length = 387 Score = 173 bits (438), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 121/381 (31%), Positives = 193/381 (50%), Gaps = 40/381 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WR Y EGKQ G +P+++LA+AR AR +GV P Sbjct: 26 LYLFVTPAGGKSWRANYLREGKQATRTYGRWPDVSLAEARKAHAAAR----DGVVPAT-- 79 Query: 61 KNDKVEQSKARTFKEVAIEWHG------TNKKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 +F+ +A W +N K H +V +LE +F +G+R I Sbjct: 80 -------VAVPSFETIARAWLKLKLPTLSNGK----HQSQVANTLERFVFPKIGKRPIDT 128 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN-R 173 + +L+ ++AV++ GR+E A R+ R A+ YA +GLI+ +PA + + S + Sbjct: 129 IHRPELVDVVQAVQLDGRVETAHRVAGRIAAVFDYAQDAGLIESHPASHLVRVLHSRKVK 188 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 + ++ L+ I Y P+T ++L F+R ELR RWSE + ++W Sbjct: 189 KPMASIAPAEAGALMRAITDYD-EPVTGLGLQLLAHTFVRVGELRAMRWSEFKEDGAVWV 247 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP ER K+R H+VPLS QA AI+ Q++ + + P+ Sbjct: 248 IPAER------------MKLRLPHVVPLSLQAQAIVGQLRLLNAEREFVMDSPLRPGHPL 295 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 SENT AL +GY + + HGFR +A + L E ++ D +ERQ++H ++VRAAY Sbjct: 296 SENTFLFALYRLGYRGR--MTAHGFRALASTVLNEQSGFAHDVIERQLAHKETDAVRAAY 353 Query: 354 IHKAEHLEERRLMLQWWADFL 374 ++A++L +RR ++QWWA +L Sbjct: 354 -NRAQYLPQRRELMQWWAQWL 373 >UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammaproteobacteria RepID=A0KW55_SHESA Length = 411 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 123/382 (32%), Positives = 183/382 (47%), Gaps = 28/382 (7%) Query: 1 MHLLVHPNGSKYWRLQY--RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V G K W +Y K LG YP+++LA+AR + EARK LA G+DP Sbjct: 31 LYLYVRTAG-KTWEFRYIRPSTSKPTYFGLGSYPDVSLAEARDKALEARKNLAEGIDPQL 89 Query: 59 KKKNDKVEQS--KARTFKEVAIEW----HGTNKKWSEDHAHRVLKSLEDNLFAALGERNI 112 K +K++ + A+T K +A W G+ K + + R LE F LG I Sbjct: 90 LKVENKLKAATENAQTLKHIAQMWMDSKQGSIKPKTIEGNWR---KLELYAFPKLGSIAI 146 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 + L +A +K +E G LE R Q IM ++V SG I NP + Sbjct: 147 SRLTAPIAIAALKPLEQKGHLETVKRTAQLLNEIMNFSVNSGYIHANPLSGIREVFRKSK 206 Query: 173 RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 +H AL+ + ELL I + TR IE L R +E ARW EIDF+A +W Sbjct: 207 VEHLKALKPAELAELLQTIANANLLLTTRCLIEWQLHTMTRPNEAAGARWEEIDFDAKLW 266 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 TIP R KM H++PL+ L IL+ +K +F D K Sbjct: 267 TIPESR------------MKMNREHIIPLTEHTLTILETVKPISEQSQFVFPSSKDPQKH 314 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 T+N AL MG K GHG R++A ++L E G + D +E ++H+ +N +R+A Sbjct: 315 TDPETINKALGRMGL--KGRTTGHGLRSLASTTLNEQG-FDGDVIEAALAHVDKNQIRSA 371 Query: 353 YIHKAEHLEERRLMLQWWADFL 374 Y ++ +LE R +++WW++ + Sbjct: 372 Y-NRTTYLERRTKLMEWWSNHI 392 >UniRef50_A3ZAX6 Prophage CP4-like integrase n=2 Tax=Synechococcus RepID=A3ZAX6_9SYNE Length = 426 Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 130/390 (33%), Positives = 187/390 (47%), Gaps = 33/390 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V +GSK WR YR++G ++ +G YP + LADAR + E + G+DP + Sbjct: 27 LYLWVARSGSKTWRKDYRWQGARRTFTIGPYPAVRLADARKQALELNTWIKAGIDPRTQV 86 Query: 61 KNDKVEQ--SKARTFKEVAIEW-HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + Q S +R F ++A W + WS + + + L + ALG+ +I + Sbjct: 87 PTQQRNQAESSSRPFVQIAQAWFEHHSASWSPRYCRDMREKLNHFVIPALGQLDIEAISR 146 Query: 118 RD----LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 D LLAPI A G E A R T ++ +AV L NPA + +A+ Sbjct: 147 SDIETQLLAPILA---RGANEQARRCNDVTRRVIEHAVDLELRQDNPAVKARKVIAATRV 203 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTR----WAIELTLLIFIRSSELRFARWSEIDFEA 229 H + +PELL ID + + L A+ L +L +R SELR ARWSE+D E Sbjct: 204 THYHRISWVELPELLEVIDRFERQRLAERSSLIALRLMMLTLVRPSELREARWSEVDTEG 263 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF-IGDHD 288 W IP ER K R H+VPLS+QA + + G DL+F +H Sbjct: 264 RQWIIPAER------------MKTRVRHIVPLSSQARHLFDMQRPITGHTDLVFHTPNHR 311 Query: 289 SH---KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 + MS ++ LR MG+ + HGFR ++ +E R E+Q++H Sbjct: 312 GSGELRVMSNGCLSMLLRRMGFQGR--QTPHGFRGFGQTNCIEQLKIPRVVTEKQLAHAD 369 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 NSV AY AE+LEER MLQ WAD LD Sbjct: 370 GNSVSRAY-DWAEYLEERSDMLQRWADLLD 398 >UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IGA6_BORPD Length = 657 Score = 166 bits (421), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 121/391 (30%), Positives = 200/391 (51%), Gaps = 22/391 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L+V G K W +Y + GKQK +ALG YP ++L +AR RD+A+ L+A G+DP ++ Sbjct: 40 LSLMVSAAGGKSWMFRYSWLGKQKRMALGGYPALSLREARAERDKAQALIARGIDPQIER 99 Query: 61 KNDK--VEQSKARTFKEVAIEW----HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 + + + TFK V W K+ + ++L+ ++ LG+ +I + Sbjct: 100 DQRRHAAKLAGEYTFKNVFDAWVEHRRKELKEGRQSTLSQILRIFNKDVLPTLGKMSIYD 159 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYA--VQSGLIDYNPAQEM-AGAVASC 171 ++ LL + A+E A +++ + RYA + GL + NPA ++ A Sbjct: 160 IRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRYALVIAEGL-EVNPAADLDVVAEPKP 218 Query: 172 NRQHRPALELKRIPELLTKIDSYTGRP-LTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 H P L L +PE L K+ Y R T+ + L L +R+ ELR A + D + Sbjct: 219 PVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRLLFLTGVRTGELRLAEPEQFDLDRG 278 Query: 231 IWTIPPEREPIPGVKHSHRGSKMR----TTHLVPLSTQALAILKQ-IKQFYGAHDLIFIG 285 W IPPE + ++ R + R ++VPLS QA+ I++ + A + Sbjct: 279 FWIIPPEV--VKQLQDEMRKAGKRPQDVPPYIVPLSLQAIEIVRYLLGVMRPAQKYLLSH 336 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 + K +SENT+N A+++MGY+ + + GHG R ++L E G + + V+ Q+SH Sbjct: 337 RSELKKRISENTLNKAVQLMGYEGR--LTGHGIRGTISTALNEIG-YPKIWVDAQLSHSD 393 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFLDV 376 N V +AY H A+++E RR M+Q WAD LD+ Sbjct: 394 PNKVSSAYNH-AKYVEPRRRMMQDWADRLDL 423 >UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157:H7 RepID=B3A9A3_ECO57 Length = 412 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 119/389 (30%), Positives = 194/389 (49%), Gaps = 28/389 (7%) Query: 3 LLVHPNGSKYWRLQYRY--EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 L V G K WR +Y + K++ +G +PE +LA+AR RDE R+++A GVDP +K Sbjct: 31 LNVSKAGGKVWRFRYSHPITKKRQTYTIGRFPEFSLAEAREVRDELRRMIARGVDPVTEK 90 Query: 61 KNDKVEQS--KARTFKEVAIEWHGTNKKWSE---DHAHRVLKSLEDNLFAALGERNIAEL 115 KN K+E S +TF+ VA W KK SE + + + L G+ +I ++ Sbjct: 91 KNRKIEMSLKNLQTFEAVANAWFAF-KKGSELRKPTLYNIEYEVYKYLVPFFGKYSIEKI 149 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + + AV L+ +L R IM YAV G + NP ++ A + Sbjct: 150 TAPVAINALDAVSDKNALQ--KKLISRLNEIMNYAVNCGALKANPLLKIKTAFTGKKNKS 207 Query: 176 RPALELKRIPELLTKIDSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 AL ++R+PE L+ DS + A+ +L +R E A WSEIDF++ +W I Sbjct: 208 LAALPVERLPEFLSWWDSVPHTYQIAHNALLFQILTMVRPGEAIKAEWSEIDFDSGLWII 267 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P + HR H+VPLS+QA++IL+ +++ +F PM Sbjct: 268 PAHK------MKCHR------EHVVPLSSQAISILRTMQEIKRGR-YVFFSSRTKDAPMG 314 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 NT+ + + + V + HGFR+M + L E G ++ D +E ++H + + +R Y Sbjct: 315 RNTIKTPIAASKFKGIVTL--HGFRSMWSTLLNEEG-FNPDVIEAALAHKSGDKIRDIY- 370 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFIS 383 ++ +LE+R++M+QW DF D R+ I+ Sbjct: 371 NRTIYLEQRKIMMQWVGDFFDDARKGVIN 399 >UniRef50_D2M358 Integrase family protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M358_RHOPA Length = 456 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 128/414 (30%), Positives = 195/414 (47%), Gaps = 59/414 (14%) Query: 1 MHLLVHPN-------GSKYWRLQYRYEGKQKMLALGVYPE-----ITLADARVRRDEARK 48 ++L V P+ SK WR+ YR+ G+QK ++G Y +LADAR RD+A+ Sbjct: 46 LYLFVTPDVSRPGNAASKLWRMDYRFHGRQKTYSIGPYGNGRDGTFSLADARRERDKAKD 105 Query: 49 LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWHGTNK----KWSEDHAHRVLKSLE---- 100 LL G DP +K+ DK +Q+ AR F + A EW K K A R K++E Sbjct: 106 LLKEGKDPSIEKQLDKHKQAAARPFAQWADEWLAKKKVEKVKRGRIVAVRDPKTVEVLEL 165 Query: 101 --DNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY 158 + A G+ ++K D+LA +++ E GRLE R++ I YA G Y Sbjct: 166 RVGYVKARFGKLCRQDIKRPDVLAFMRSYEAEGRLETRDRVRSIGEQICDYADVEG-DGY 224 Query: 159 NPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTR--------WAIELTLLI 210 NP + + G + + RP + P +T++ P TR A+ L Sbjct: 225 NPFRNLNGQMIANISTPRPGVTE---PRDVTRVFKLISAPWTRARFGDVVGLALRFNALT 281 Query: 211 FIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRT--THLVPLSTQALAI 268 R + W E+D++A WT+P KM+T H+VPLS QALAI Sbjct: 282 IPRPGMVNEMEWGEVDWDAKRWTVP--------------APKMKTGWDHVVPLSRQALAI 327 Query: 269 LKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACS---- 324 L+ +++ G F D+ P+S NT+N LR++G DTK + C HGFRT + Sbjct: 328 LRSVQKLTGHRRYAFSCSKDA--PLSNNTLNKRLRLLGIDTKTDHCAHGFRTTFSTLSHH 385 Query: 325 -SLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE--HLEERRLMLQWWADFLD 375 + ++ W D VE Q++H+ ++V Y + R ++Q WAD +D Sbjct: 386 EEIKDAKAWDGDVVELQLAHLDNSTVEGLYKKHGPLALIGSRTKLMQHWADRID 439 >UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FEDC Length = 418 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 119/395 (30%), Positives = 199/395 (50%), Gaps = 42/395 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LL+ P+G K W+ +R + +G YP+I+L AR +AR+L+A G++P K Sbjct: 26 LFLLIKPSGYKSWKYDFRINSTRGSYTIGKYPDISLKQARQEHLQARELVAQGINPKQIK 85 Query: 61 KNDKV-EQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKS-LEDNLFAALGERNIAELKTR 118 KV ++ + + F +W NK+ + + LK ++ NL L ++NI E T Sbjct: 86 TQRKVNDELQTKRFSYYMNQW--LNKQVLAESTFKDLKQRIDKNLIPFLDKKNINEYTTA 143 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ---- 174 DLL + ++ G E A RL + + G+I+ NPAQ +A + +++ Sbjct: 144 DLLKIMLSISDRGAKETAIRLANVARRVFNEVLILGIIETNPAQGLAELLPKPDKRIDNN 203 Query: 175 --HRPALELKRIPELLTKIDSYTGRP--LTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 H + E +I LL +ID+ + R A++L L+F+R +RF +W I+F+ + Sbjct: 204 FGHITSTEELKI--LLNQIDAPSARQDFAVTQALKLMPLVFLRPYNIRFLKWEYINFDEN 261 Query: 231 IWTIPP----EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 I +P +P+ VPL+TQA+ ILKQ++Q G +F+ Sbjct: 262 IIKLPATELKNNKPLD----------------VPLATQAVTILKQMQQVTGHKTYVFVTA 305 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCG------HGFRTMACSSLVESGLWSRDAVERQ 340 P+SENT +AL+ + T + G HGFR A + L E G + D +E Q Sbjct: 306 QGKDTPLSENTTTNALKRIINPTTNKPYGTGYMTSHGFRHTASTMLNELG-YEADIIELQ 364 Query: 341 MSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 ++H ++ +RA Y +KA+ + +R M+Q WAD+LD Sbjct: 365 LAHTNKDRIRATY-NKAKWMNKRIAMMQDWADYLD 398 >UniRef50_Q5LS43 Site-specfic recombinase, phage integrase family n=4 Tax=Rhodobacterales RepID=Q5LS43_SILPO Length = 406 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 117/381 (30%), Positives = 195/381 (51%), Gaps = 27/381 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G+K W + GK+ + +G ++LA+A + RKL G DP K Sbjct: 41 LFLKVDDTGAKRWVQRIVIRGKRTEIGMGSASLVSLAEASETALQNRKLARAGGDPLQAK 100 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNK-KW-SEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + TF+E A + H ++ W ++ HA + + +LE F +G+ ++E+ T Sbjct: 101 RTAQA----LLTFEEAARKVHKIHEPTWRNKKHAAQFISTLETYTFPRIGKLKVSEVATA 156 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC--NRQHR 176 D+LA ++ + + + E A R++QR +M++A+ +G NPA+ ++ A+ +QHR Sbjct: 157 DVLAVLQPIWLE-KPETARRVRQRIGTVMKWAIANGWRTDNPAEAISQALPKQIDTQQHR 215 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 AL ++PE L + + T+ A+EL +L RSSE+R A WSE D E IWT P Sbjct: 216 KALPYDKVPEFLETLKASDAGDFTKLALELVVLTASRSSEVRKAEWSEFDLEQGIWTRPA 275 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER K + H VPLS +AL IL + ++ L+F G KP+S+ Sbjct: 276 ER------------MKSKKEHRVPLSPRALEILIEARELCTGEGLVFPGTKIG-KPLSDM 322 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+ + +GYD V HGFRT + E RD E ++H+ ++ AAY + Sbjct: 323 TLLKLTKALGYDVDV----HGFRTSFKTWAQERTNTPRDVSEAALAHVLKDKAEAAYA-R 377 Query: 357 AEHLEERRLMLQWWADFLDVN 377 ++ E+RR +++ WA ++ N Sbjct: 378 SDFFEKRRKLMERWASYISSN 398 >UniRef50_C6ALW6 Prophage integrase n=2 Tax=Pasteurellaceae RepID=C6ALW6_AGGAN Length = 413 Score = 164 bits (414), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 117/394 (29%), Positives = 193/394 (48%), Gaps = 31/394 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYE----GKQKMLALGVYPEITLADARVRRDEARKLLANGVDP 56 + L ++P G+K WR +RYE + +G +P ITLA ARV+RDE LLA G+DP Sbjct: 32 LFLEIYPTGAKKWR--FRYERPITKARTKFNIGDHPSITLAQARVKRDEYNALLAQGIDP 89 Query: 57 GD--KKKNDKVEQSKARTFKEVAIEW-HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIA 113 + K+K+ ++ TF + A W KK D + + +E L +LG+ I Sbjct: 90 QEHAKQKHQALQFQLENTFLKWAERWKENKEKKVKADTLRKDWRRIEMYLLESLGQIPID 149 Query: 114 ELKTRDL---LAPIKAVE----MSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG 166 ++ L L P++A++ + + R+ + I+ YA+ +G I +NP + Sbjct: 150 KVLPPLLIQALTPLEAMKDRRTGTADSDTLKRVIRLANEILTYAMNAGAIPFNPCLSVKD 209 Query: 167 AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 + + P +E + +P LLT I +P T+ I LL +R SE A W+E D Sbjct: 210 IYSFAPAESHPHIEPEELPLLLTDISESKAQPRTKDLILFQLLTMVRPSEASNAEWAEFD 269 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 E +WTIP E+ KM+ H VPLS+Q + +L+ ++ G +F Sbjct: 270 LENKVWTIPAEK------------MKMKHPHKVPLSSQTIRLLQHLQSQTGHKRFVFASR 317 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 + ++PM+ +VN AL MGY K + HG R++ + + E + + +E ++H Sbjct: 318 NKINEPMNSQSVNKALVDMGYKGKQD--AHGLRSIGRTYIGEKQMDGYEVLEMCIAHKVG 375 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 S Y KA+ E+R ++Q W DF++ ER Sbjct: 376 TSTGKIY-DKADFFEQRIPIMQAWGDFVEQCAER 408 >UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria RepID=Q3SF40_THIDA Length = 440 Score = 164 bits (414), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 112/408 (27%), Positives = 194/408 (47%), Gaps = 49/408 (12%) Query: 1 MHLLVHPNGSKYWRLQYRY-EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 +++ + P G + W L+YR GKQ+ + LG YP +LADAR RD+ + L G+ P Sbjct: 26 LYIEIMPTGKRRWGLKYRIPTGKQETIRLGDYPAYSLADARTWRDDCKALAGRGLSPMAL 85 Query: 60 KKNDKVEQSKARTFKEVA---------------------------IE-----WHGTNKKW 87 K+ D + + A KE+A +E W+ + Sbjct: 86 KRGDPIPEDAAPAAKELAQFFIRNWCMKAVEKAKAKEAEAKAADTVEAFAWRWYAEIVEP 145 Query: 88 SEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIM 147 + + + + L+ + A+G + IA++ D+LA ++ G ++A + + + Sbjct: 146 ANSNPRNIKRILDKDAIPAIGSKQIADVTVTDILAITDKIKNRGADQMALQTRNVLKRLF 205 Query: 148 RYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELT 207 YA+ +NPA + + + AL + I LL I + + + A+ L Sbjct: 206 AYAIAREKTTFNPAAAIEAKFIAQAKSRDVALSPEEIGRLLRAIYQSSMKRAHKLALHLL 265 Query: 208 LLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALA 267 +L +R SEL A+W E+D E + W IP ER K HLVPLS QA+A Sbjct: 266 ILCMVRKSELTEAKWEELDLEKAEWAIPGER------------MKKDKPHLVPLSRQAVA 313 Query: 268 ILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLV 327 + +++K + +F KP++ N +N+ +R + D + V H FR A + L Sbjct: 314 MFEELKGLASGSEWVFPSRSSLKKPIAHNALNTVVRALEADVRDFVI-HDFRRTASTHLH 372 Query: 328 ESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 E+G + D +E+ ++H + +R Y ++A++ ++RR MLQWWADF+D Sbjct: 373 EAGF-NSDWIEKALAHETKG-IRGVY-NRAQYADQRRDMLQWWADFVD 417 >UniRef50_Q4K6S7 Site-specific recombinase, phage integrase family n=4 Tax=Proteobacteria RepID=Q4K6S7_PSEF5 Length = 413 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 114/395 (28%), Positives = 189/395 (47%), Gaps = 23/395 (5%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++ V P+G K W+L+Y R G + LG YPE++ A AR + E RK +++G+DP ++ Sbjct: 34 LYFRVKPDGGKSWQLRYKRPAGNWAWMGLGGYPEVSGALAREKAAELRKTISSGIDPLEQ 93 Query: 60 KKNDK--VEQSKARTFKEVAIEW--HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K++ K ++ +K RTF+ A W K + +++ L+ ++ ALG++ + E+ Sbjct: 94 KRSAKAAIDAAKTRTFRAAADAWLKAKEEKGLAPSTLNKIRTYLDKDILPALGDKPLDEI 153 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-Q 174 D ++E VA + + I A+ GL + +P + A + Q Sbjct: 154 TRTDCAELQASIEARDAHNVAEKCRTWINQIFGRAIGLGLTENDPGSRLRDIAAQAPKTQ 213 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 P L + E LT + + R R A L + R +R A W E D + + WT Sbjct: 214 QHPHLLEPELGEFLTALKNTPSRLTARTAAWLCIWTASRPGMVRLAEWKEFDLDKATWTT 273 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P + KMR + PL QA+A LK++ G +F G + +S Sbjct: 274 PAAK------------MKMRRDFVCPLPHQAIAALKELHCLTGRSRWLFPGVGAKNPTIS 321 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 ENT+N +GY K + GHG R A + L E G W ++ VE Q++H + Y Sbjct: 322 ENTINKVFATIGY--KGRLVGHGTRHTASTLLREHG-WPKEHVEAQLAHK-EEGISGVY- 376 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFISPFEYAK 389 +KA++LE+R M+QW+AD LD + + ++ K Sbjct: 377 NKAQYLEQRITMMQWYADHLDALEQGKVIQGQFGK 411 >UniRef50_B3GXJ8 Prophage CP4-57 integrase n=4 Tax=Pasteurellaceae RepID=B3GXJ8_ACTP7 Length = 406 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 111/380 (29%), Positives = 193/380 (50%), Gaps = 17/380 (4%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V P+ K W Y+ ++ L +G YP I++A+AR R+E R LLA G+DP Sbjct: 31 LYLRVKPSKVKTWIFNYQEPITKRRTNLTIGDYPAISIAEARTIREEYRALLAKGIDPKT 90 Query: 59 KKKNDKVEQSKAR--TFKEVAIEWHGTNKKWSEDHAH-RVLKSLEDNLFAALGERNIAEL 115 K+ + +Q++ TF ++A W K E + LE++LF LG I ++ Sbjct: 91 NKEEQERQQAEQNDNTFLKLAQLWKEKRSKEVEPLTMAKNWARLENHLFPVLGHYAIDKI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 L+ +K + G + R+ I+ Y V G++ +N Q ++ A + H Sbjct: 151 TPPILIKAVKPLNDKGINDTLHRILNLANQILNYGVTVGVLPFNACQNVSDAYHKETQTH 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 PA++ +P+L+ + LT+ + LL +R +E W+EIDF+ ++W IP Sbjct: 211 HPAIKPSELPKLIADFQNSNRDFLTKVLFKWQLLSMVRPAEAVSIEWAEIDFDKNLWFIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 E+ +K + +G + H VPLS+Q L IL+ ++ G + +F +K MS+ Sbjct: 271 AEK-----MKKTRKG---QFPHTVPLSSQMLKILESLRPITGVNKFVFPHYSQPNKSMSK 322 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T+ +ALR +GY + HG R++A + L + + R A E ++H N AY + Sbjct: 323 ETITNALRKIGYRGIQD--SHGLRSIARTYLEDQAVDFR-AAESCLAHRIGNETSQAY-N 378 Query: 356 KAEHLEERRLMLQWWADFLD 375 +AE++E RR ++Q W D+ + Sbjct: 379 RAEYIELRRPLMQLWGDYCE 398 >UniRef50_A9MQQ9 Putative uncharacterized protein n=9 Tax=Salmonella enterica RepID=A9MQQ9_SALAR Length = 247 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 79/181 (43%), Positives = 117/181 (64%), Gaps = 1/181 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V +G+K W +YR++GK+ LA G YP +TLA+AR +RD ARKLLA+G+ P + Sbjct: 26 LYLTVSTSGAKLWYFRYRFDGKENRLAFGAYPLVTLAEAREKRDAARKLLASGICPSQLR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K + ++RTFK +A WH + K WSE HA ++L L+ +F +G +IA+++TR Sbjct: 86 KTNDASVDESRTFKFIATAWHTSCLKLWSEGHADKILTCLKRYVFPDIGAMDIAKIETRH 145 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 L +KA++ G +VA R++Q T IMR+AVQ G+I YNPA ++ G V QH PA Sbjct: 146 LAQLVKAIDDKGVHDVAGRVRQHLTKIMRHAVQQGVIKYNPAYDLDGVVTPTVTQHHPAP 205 Query: 180 E 180 E Sbjct: 206 E 206 >UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZI9_ACILW Length = 401 Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 114/389 (29%), Positives = 179/389 (46%), Gaps = 32/389 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKM--LALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V PNG K W +Y G K + LG YP ++L +AR RDE + + Sbjct: 26 LSLKVEPNGRKSWSYRYSLAGTNKRPRMKLGEYPVMSLKEARSVRDEYK---------FN 76 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRV------LKSLEDNLFAALGERNI 112 +N + + +TF+++ EW K S + R K L+ +++ +G Sbjct: 77 NYENKPLHKKYIKTFQDICEEWLEFKIKNSFEDEPRCGVIQLAKKCLDQDVYPNIGLMPF 136 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 E+K DL+ IK +E E + I YAV G +YN A + + + Sbjct: 137 IEIKRYDLVKIIKKIESRNVKEPVKKAYSYLNQIYDYAVAMGYCEYNIAHGLHKILVNNK 196 Query: 173 -RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 +++ P L + L K++ P+ + A+ L +R EL D + I Sbjct: 197 IKKNYPHLNSDELSNFLAKLNQINTDPIIKKALLFKLYTGVRGGELLLCEPHHFDLDKKI 256 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTH-----LVPLSTQALAILKQIKQFYGAHDLIFIGD 286 W IP +K R K+ H VPLS QAL ++K + +F Sbjct: 257 WKIPALH-----IKQYRR--KVILGHDIPDFFVPLSDQALEVVKSALVWSHGEKYVFSSP 309 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 +++KP+ NT+N +R MGY TK E+ HG R+ + L ESGL+ + +E Q+SH + Sbjct: 310 RNNNKPIHFNTLNLIIRKMGY-TKNELTSHGLRSTFSTILNESGLFQSNWIEAQLSHTDK 368 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLD 375 N RA+Y H AE+ +R M+QWW DF+D Sbjct: 369 NKTRASYNH-AEYFNQRMEMMQWWGDFID 396 >UniRef50_B9D1P3 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter rectus RM3267 RepID=B9D1P3_WOLRE Length = 395 Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 117/391 (29%), Positives = 197/391 (50%), Gaps = 44/391 (11%) Query: 1 MHLLVHPNGSKYWRLQYRY--EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 +++ V P+G KY+ L+Y+ + K K L LG +PE +LA AR R + + + +G+D Sbjct: 31 LYIFVDPSGRKYFALEYKSPADNKIKRLNLGDFPEFSLAMAREERFKLEQKVRDGIDV-- 88 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHA-HRVLKSLEDNLFAALGERNIAELKT 117 K +++ EQ+ FK++A W E + +R + LE + R+I ++ Sbjct: 89 KHESEINEQA---NFKKLAQRWLEIKAASVEPNTLNRDKRLLEMYAYPFFENRSITDITV 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMR---YAVQSGLI-------DYNPAQEMAGA 167 D++ +K +E G LE+ RL I + Y + +I + +E A Sbjct: 146 TDVIEILKKIEAKGSLEMMKRLYSLLNQIWQSAYYIAPNNVIASINYRFTFKKVKEKNYA 205 Query: 168 VASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDF 227 + N I L ID Y+G T++A++ +L +R +R A+W IDF Sbjct: 206 TLTKNAD---------IKALWQSIDEYSGDIRTKYALKFAVLTALRPFNIRSAKWEYIDF 256 Query: 228 EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH 287 + + +IP KMR +PLS QAL +LK+ K + +F + Sbjct: 257 DEGVISIPAG------------DMKMREAFTLPLSRQALELLKEYKGYNLDQIYLFGSLY 304 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTM---ACSSLVESGLWSRDAVERQMSHM 344 S + MSENT+N ALR MG+ +K E+ HGFR M C+ +++ + D +E+ ++H Sbjct: 305 GSARYMSENTLNVALRRMGF-SKDEIVSHGFRAMFSTVCNENIDAHGLNFDIIEKCLAHK 363 Query: 345 ARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 + +RAAY ++A++L + R M+QWWAD+LD Sbjct: 364 GTDKIRAAY-NRAQNLAQMRAMMQWWADYLD 393 >UniRef50_B6WTC3 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WTC3_9DELT Length = 269 Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 84/231 (36%), Positives = 133/231 (57%), Gaps = 2/231 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G KYWR +YR E K+K++ALG +P+++L +AR +RD+ R+ +A G DP K Sbjct: 27 LYLQVSPTGGKYWRFKYRVEKKEKLVALGTWPQVSLKEAREKRDQCRQEIAAGNDPMLLK 86 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K RTF+EVA W + WSE HA + + L N++ LG+++IA ++ + Sbjct: 87 KARAEAACPGRTFQEVAEAWRNNMENVWSESHAKTIRERLALNVYPVLGKKDIAGIRPTE 146 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA-VASCNRQHRPA 178 +LA ++ +E G E A R+ I RY V GL++ +P++++ GA V +Q Sbjct: 147 ILAMLRKIEARGAYETAQRVLGICGQIFRYGVAVGLLESDPSRDLRGALVPHQGKQLAAI 206 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 + + LL +D Y G + R A++ + L F R E+R A W E+DFEA Sbjct: 207 TDPAEVGALLLCMDQYKGGVVVRAALQFSALTFCRPGEIRHAEWGEVDFEA 257 >UniRef50_A7H0X5 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter curvus 525.92 RepID=A7H0X5_CAMC5 Length = 396 Score = 156 bits (395), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 114/384 (29%), Positives = 188/384 (48%), Gaps = 31/384 (8%) Query: 1 MHLLVHPNGSKYWRLQY--RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 +++ V P+G+K + ++ R G+ K ++LG YP I+L AR +R E +K LANG +P Sbjct: 27 LYIQVMPSGTKTFIYEFKSRSSGRYKRISLGQYPAISLLMAREKRLEFQKALANGDEPMS 86 Query: 59 KKKNDKVEQSKARTFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K +F+ V EW K+ S A + E G+ +I + Sbjct: 87 EAKQ------AMTSFEAVFDEWFKFKQKEVSTKQAFTHKRYYERFFLPKFGKDDIKTITK 140 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQ--EMAGAVASCNRQH 175 R +L ++++ + E R + + R+AV + ++++P + H Sbjct: 141 RQILEAVESLNKEAKFETLDRALSSISQLFRWAVMNEYLEHSPTYGIDKNALFKMPKVNH 200 Query: 176 RPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 A+ + I +L+ I +Y G A LL R +R A+WSEI+FE IW I Sbjct: 201 YAAIFDDDGIRKLVNNIKNYDGDIRVITAALFGLLSAQRPFNVRSAKWSEINFEKKIWEI 260 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E+ KM+ H+VPL +QA+ +L K++ + +F + P+S Sbjct: 261 PKEK------------MKMKEAHIVPLCSQAIKLLSSFKKYEFRSEFLFPSVKSTKIPIS 308 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACS----SLVESGLWSRDAVERQMSHMARNSVR 350 +N+V S LR +GY T ++ HGFR M + + E GL R +E + H RN V+ Sbjct: 309 DNSVRSMLRNLGY-TNDDIVPHGFRAMFSTICHEHIKEHGLEER-IIELCLDHAERNKVK 366 Query: 351 AAYIHKAEHLEERRLMLQWWADFL 374 AAY H A++L+ER ++QWW D+L Sbjct: 367 AAYNH-AKNLKERAQLMQWWGDYL 389 >UniRef50_D0D2S4 Site-specfic recombinase, phage integrase family n=1 Tax=Citreicella sp. SE45 RepID=D0D2S4_9RHOB Length = 479 Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 115/375 (30%), Positives = 190/375 (50%), Gaps = 27/375 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV PNGS+ W + GK++ + LG +TLA+AR RK+ G DP + Sbjct: 124 LYLLVKPNGSRSWVQRIVIRGKRREMGLGSASLVTLAEAREAALANRKVARAGGDPIQAR 183 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNK-KW-SEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + E TF+E A + + ++ W + HA + + +LE F +G + ++ T Sbjct: 184 Q----EALAVLTFEEAARKVYEMHRPTWRNPKHASQFINTLETYAFPKIGAVKVGDVNTN 239 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ--HR 176 D+L + + + + E A R++QR +M++AV G NPA+ ++ A+ +R+ HR Sbjct: 240 DVLRVLTPI-WTTKPETARRVRQRIGMVMKWAVAKGWRQDNPAEAISQALPKHDRRKAHR 298 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ +P + + + LT+ A+E +L RS E+R A WSEID EA+IWT+P Sbjct: 299 KAMPYAEVPGFIATVKASKAGALTKLAMEFLILTAARSGEVRGASWSEIDSEAAIWTVPA 358 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +R K + H VPLS +AL IL + + DL+F G +P+S+ Sbjct: 359 DR------------MKAKREHRVPLSPRALEILSEARAISDGSDLVFPGSRRG-RPLSDM 405 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T++ R +G+ V HGFRT E R+ E ++H RN AAY + Sbjct: 406 TLSKLTRELGFAVDV----HGFRTSFRMWAQEQTDAPREVAEAALAHTIRNQAEAAYA-R 460 Query: 357 AEHLEERRLMLQWWA 371 ++ E RR +++ W+ Sbjct: 461 SDLFERRRSLMERWS 475 >UniRef50_C9M6R5 Site-specific recombinase, phage integrase family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6R5_9BACT Length = 393 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 112/386 (29%), Positives = 177/386 (45%), Gaps = 34/386 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV PNG K W ++Y + K L +G YP + LA+AR RDE + D + Sbjct: 25 LYLLVCPNGRKVWTVRYWIDKKLHQLTIGDYPMMGLAEARAERDEIK---------NDAR 75 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 KV TF E A EW+ K+ + + L L L R + E+ ++ Sbjct: 76 YEKKVAAPMGLTFGEFAREWYEKRKRPKLSKSAQALYDLRFRYLDPLMARPLTEITREEI 135 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL- 179 + + + E R + +M YA+ + I Y+P+ ++ + + PA Sbjct: 136 VDTLHKLSEQHPAETVRRTGGIVSMVMGYALATRKIPYDPSSQLGLELPIHVSKPMPAAT 195 Query: 180 ---ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 E+ + L IDS + R AI+L F+RS E ARW EID + +W++P Sbjct: 196 HASEIGVLMRALESIDSL----VLRSAIQLIAYTFVRSGEACLARWDEIDLKEGLWSVPA 251 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 E +K + HLVPLS QA+ IL +++ +G IF + + Sbjct: 252 EH------------TKTKLDHLVPLSRQAVMILDTLRRRFGGKGHIFPSRNRGKLVIPST 299 Query: 297 TVNSALRVMGYDTK---VEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 +++ + + HGFR A + L E W+RD +E Q+ H RN R AY Sbjct: 300 LSREMVKLQSLPLEARPIPTVVHGFRATASTVLNEHQ-WNRDVIEAQLGHFERNKSRRAY 358 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRE 379 ++AE+L R M+QW+AD+LD R+ Sbjct: 359 -NRAEYLPIRISMMQWYADYLDALRD 383 >UniRef50_A4VPC8 Site-specific recombinase, phage integrase family n=6 Tax=Proteobacteria RepID=A4VPC8_PSEU5 Length = 455 Score = 155 bits (392), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 116/390 (29%), Positives = 187/390 (47%), Gaps = 36/390 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV P G K WR +YR +GK+ + A+G +P+++LA+AR R++AR L+ G+ P ++ Sbjct: 81 LFLLVKPTGCKLWRWKYRLQGKENLFAIGSFPQVSLAEARTAREKARALVKQGIHPAHER 140 Query: 61 KNDK-------VEQSKAR--TFKEVAIEWHGTNKKWSEDHAHRV----LKSLEDNLFAAL 107 + K E+ +AR +F +VA + K ++R ++ F + Sbjct: 141 QQVKQRNLEALAERKRARESSFAKVAQAYLTEIKPVFAYSSYRTKESRIRKYLSPKFDGM 200 Query: 108 GERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA 167 +I + R LL K + V L +AI +AV GL++ NP + G Sbjct: 201 PMSDIGVKQIRPLLEECKTHGAWAAIHVKGDL----SAIFEFAVVRGLVEANPIPSLRGL 256 Query: 168 VASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDF 227 + + + + A+ ++I + + Y G P T + L L R E A W E DF Sbjct: 257 LRAPASESKAAMTREQIQKFYQALRGYRGYPETALCLRLIALTACRPGEAADAEWEEFDF 316 Query: 228 EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH 287 E ++W P + K R H+ PLSTQA+A+LK +++ G +F H Sbjct: 317 EDAVWRRPAAK------------MKARRDHISPLSTQAIAVLKGLQRITGGGRYLF--PH 362 Query: 288 DSHKPMSE-NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 S K + N + A+R M H +RT + E+G DA+ERQ++H+ Sbjct: 363 RSGKGFTTPNRLTYAMRDMNLGRGTTP--HCWRTTFSTWANENGF-RPDAIERQLAHVES 419 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDV 376 N VRA Y +KA L++RR +LQ WA +L Sbjct: 420 NKVRATY-NKALLLDQRRSLLQAWAGYLST 448 >UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID=B2UB26_RALPJ Length = 415 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 113/385 (29%), Positives = 180/385 (46%), Gaps = 29/385 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + +LVHP GSK WR QY GK++ + +G YPEI ++DAR R E R ++ G DP + + Sbjct: 31 LFVLVHPGGSKAWRYQYMLSGKRRSVLIGSYPEIGVSDARDRHAEYRAMVEQGTDPAEHR 90 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKW--------SEDHAHRVLKSLEDNLFAALGERNI 112 + DK E+ + +E + + KW +E + ++ LE ++ +G + + Sbjct: 91 RQDKAERKAKESLQEDEGLFKAFSLKWIDERLATKTEGYRSQIKSRLERFVWPVIGRKAL 150 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAAR--LQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 ++K LL I+A + R +QQ I YA+Q L++ NPA + G + Sbjct: 151 EDVKPSHLLEIIEARRATPNTAEGVRVIIQQ----IYNYAIQKLLVESNPAVPLRGVITV 206 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 +H L + + P T A L + R SE+ A+W+E D + + Sbjct: 207 PKAEHHRHLSESELGAFWRALGRQGAHPATTAAARLLVYSMCRKSEVLRAKWAEFDLDKA 266 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 W IP ER K R H V LS QA+ +L+ ++ G + + Sbjct: 267 QWDIPAER------------MKSRRPHRVYLSRQAIELLEIMRAISGDGVYVLPSVKIAS 314 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 P++E T+N + + + E HG R A + L E G +SRD VE ++H R+ Sbjct: 315 VPLAEATLNHLFKRLDFGVP-EFSPHGTRGTAATLLREHG-FSRDVVELLLAHTERSQTA 372 Query: 351 AAYIHKAEHLEERRLMLQWWADFLD 375 A+Y H E ERR LQ+ AD +D Sbjct: 373 ASY-HHHELEAERRKALQYLADEID 396 >UniRef50_A8EUF6 Putative phage integrase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EUF6_ARCB4 Length = 405 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 110/392 (28%), Positives = 194/392 (49%), Gaps = 37/392 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V NG+K++R + Y K+K ++ G+YP+I+L +AR R++A++ L ++P + K Sbjct: 31 LYLVVKSNGTKFFRFDFSYTKKRKSMSFGIYPDISLKEARELREKAKEQLKQNINPIEAK 90 Query: 61 KNDKVEQSKARTFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 ++ TFK + +W +W L +++ A+G++ I+ ++ D Sbjct: 91 SSN---FGNISTFKYITEKWLKLMTSEWKHVTYELNENRLRMHVYPAIGDKPISSIEILD 147 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR--QHRP 177 +L I+ ++ E+A R+ I +YAV G +N ++ + HR Sbjct: 148 ILNIIQKLQEKEYFEIAERILNVIERIYKYAVTYGYTKHNIIADIDKRTVFAKKIVIHRA 207 Query: 178 AL-ELKRIPELLTKIDS----YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 L + I ELL I S Y T +A+ + + +R +R W+E++FE Sbjct: 208 TLTKENEIKELLKDIKSYGELYKADISTIYALNIAPYLALRPYNIRLLEWNEVNFEKEYL 267 Query: 233 TIPPEREPIPGVKHSHRGSKMRTT--HLVPLSTQALAILKQIKQF-YGAHDLIFIGDHDS 289 IP +KM+T ++PLS QAL ILK IK + + +F + Sbjct: 268 DIP--------------ANKMKTNKDFVLPLSKQALEILKTIKPYSFDRSKYVFPSPTSN 313 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFR----TMACSSLVESGLWSRDAVERQMSHMA 345 KP S+ T+N AL +GY K + HGFR T+A + E G S D +E ++H Sbjct: 314 LKPFSDATLNHALMKLGYKDK--ITSHGFRAMFSTIAHEKIKEHGFHS-DIIESCLAHAE 370 Query: 346 RNSVRAAYIH--KAEHLEERRLMLQWWADFLD 375 N ++AAY K ++ +E++ ++QWW D+L+ Sbjct: 371 TNKIKAAYNRESKMKYYDEKKGLMQWWTDWLN 402 >UniRef50_Q3JXH9 Integrase or site-specific recombinase n=24 Tax=cellular organisms RepID=Q3JXH9_BURP1 Length = 414 Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 112/377 (29%), Positives = 190/377 (50%), Gaps = 22/377 (5%) Query: 3 LLVHPNGSKYWRLQYRYEGKQK-MLALGVYPEITLADARVRRDEARKLLANGVDPGDKKK 61 L V +GSK+WR +Y GKQ+ ++ +G YP ++L AR R +++A GV P + Sbjct: 38 LEVMTSGSKFWRYRYSLHGKQQPVVTIGEYPAVSLTAARERARRYAEIVAGGVSPVADAR 97 Query: 62 NDKVEQSKARTFKEVA---IEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 D+ T E A IE K S ++ ++LE +++ A+G ++++++ Sbjct: 98 KDRGAVKSLDTIHEFAEYWIEQQMMGK--SAEYLRTTRRALEKDIYPAIGGKSVSDVTPG 155 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 D+LA ++ G ++A + I YA+ L+ NPAQ + + Sbjct: 156 DVLAICDRIKKRGAPKMALSTRNILKRIYEYAIARQLVTSNPAQAIVARFVATQASRDRV 215 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L I +L + + + R + AI L +L +R SEL ARW E D +ASIW IP ER Sbjct: 216 LSPNEIGRVLRAVYASSIRRPLKLAIHLLVLTMVRKSELIEARWDEFDLDASIWRIPAER 275 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K H V L+ QA+A+L+++ +H +F + +P++++T+ Sbjct: 276 ------------MKKDREHWVYLAPQAVAMLRELHATRTSHQYVFPSSRGADRPIAKSTL 323 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 N A+R + D + V H FR A + L E G S DA+E+ ++H + ++ Y ++AE Sbjct: 324 NQAVRALDMDVQHFVL-HDFRRTASTHLHEMGQPS-DAIEKALAHSIKG-IKGVY-NRAE 379 Query: 359 HLEERRLMLQWWADFLD 375 + +ERR + WADF+D Sbjct: 380 YADERRRITALWADFVD 396 >UniRef50_C6RLT7 Phage integrase n=2 Tax=Acinetobacter radioresistens RepID=C6RLT7_ACIRA Length = 405 Score = 154 bits (390), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 120/387 (31%), Positives = 195/387 (50%), Gaps = 26/387 (6%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 L V GSK+WR +YRY KML +G YPEI+L+ AR + E R +LA +DP ++K Sbjct: 27 LEVRTTGSKFWRYRYRYLNIPKMLTIGPYPEISLSYARDKTREYRGMLAKNLDPVTEQKK 86 Query: 63 --DKVEQSKARTFKEVAIEWHGTNKKWSEDHAH----RVLKSLEDNLFAALGERNIAELK 116 D + TFK ++ E+ +K+ + H+ L+ + ++ +G + I E+ Sbjct: 87 ALDSAMDAIQHTFKSISNEYL---EKYKDTHSQEWYENRLRYFKKDINPVIGNKPIKEVN 143 Query: 117 TRDLLAPI--------KAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV 168 + D+ + K+ +G ++ A ++Q +M+YA+ + I +P + + Sbjct: 144 SNDIRVILDNTITRIRKSKRGTGEVK-AIYVRQICAEVMQYAIITLKIINDPTIALRSYI 202 Query: 169 ASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 H LE K +L I+ Y G T+ A+ L +R+ E+R A+ S ++ + Sbjct: 203 RRPPVNHATPLEEKDKKVILALINQYGGTTGTQNALRTALYSMLRTIEIRRAKKSFVNLK 262 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD 288 + TIP R +K R K TH+VPLSTQ L I+K+ Q Y +F GD D Sbjct: 263 DATLTIP--RVSNAQIKDGKRNMKKNRTHVVPLSTQMLEIIKEQLQLYPDSIYLFPGD-D 319 Query: 289 SHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 + +NT+N AL MG + H FR A + L E +S+D +E Q++H+ + Sbjct: 320 GISMLGKNTLNEALVNMGLG---HITMHDFRATASTYLNEQN-YSKDWIELQLAHVDGDM 375 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLD 375 RA+Y H A L++RR M+Q AD +D Sbjct: 376 SRASYNH-ASWLKDRRQMMQHLADTID 401 >UniRef50_A7JWM6 Possible bacteriophage integrase n=3 Tax=Pasteurellaceae RepID=A7JWM6_PASHA Length = 404 Score = 154 bits (388), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 103/355 (29%), Positives = 178/355 (50%), Gaps = 22/355 (6%) Query: 28 LGVYPEITLADARVRRDEARKLLANGVDP----GDKKKNDKVEQSKARTFKEVAIEWHGT 83 +G YP+++LA+AR++RDE L+ G+DP ++ K +Q ++F +W + Sbjct: 60 IGSYPQMSLAEARLKRDELNTLVLQGLDPFEHLAKMQREAKEKQESIQSFAYKWADWKLS 119 Query: 84 NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVE--MSGRLEVAARLQQ 141 K + L+ LE++LF + + D + + ++ M L R+ Sbjct: 120 KGKCKPKTMEKCLQRLENHLFPRFEGYTLEDFTLTDTINRLTDLDRIMPDTLH---RIAG 176 Query: 142 RTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTR 201 I+ YAV G I++NP + A +S + H+PA+ + + E + + P + Sbjct: 177 NLIEILDYAVLCGRINFNPISVIKKAFSSVSTTHQPAIMPEELAEFMQDLQKSNRTPQIK 236 Query: 202 WAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPL 261 +E LL +R E +WS+ID+E IP +R +G K H VPL Sbjct: 237 LLVEWQLLNILRPFEAVAVQWSDIDWETKTLNIPADR---------MKGGK--NPHSVPL 285 Query: 262 STQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSAL-RVMGYDTKVEVCGHGFRT 320 + QA+AIL+++K++ G H IF D +KP + TVN+A+ R+ G K + HG R+ Sbjct: 286 TKQAIAILEEMKKYNGHHKHIFTHRTDRNKPANSQTVNNAIKRLSGGKYKGLLVAHGLRS 345 Query: 321 MACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 +A + L E +E +SH +++V +AY H+ L+ RR ++Q WADF++ Sbjct: 346 IASTYLHERFTTETLVIEACLSHTNKDTVMSAY-HRKNWLDRRRGIMQEWADFVE 399 >UniRef50_A7H3V7 Putative site-specific recombinase, phage integrase family n=2 Tax=Campylobacter jejuni RepID=A7H3V7_CAMJD Length = 399 Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 110/382 (28%), Positives = 178/382 (46%), Gaps = 32/382 (8%) Query: 3 LLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 L ++P+G K + Y+ + K + LG YP + LA+AR +RD + LA Sbjct: 27 LCIYPSGKKTFIFNYKCPKTLRYKRITLGEYPTLNLANARKQRDNLKVNLA--------- 77 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 +ND + + TFKE+A+E K + SE + L+ F GE + +L+ +D Sbjct: 78 ENDSIREKSEITFKELALEKMELKKLELSEKTYKSYVSYLQRFAFGIYGEIILDKLQIKD 137 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA---VASCNRQHR 176 +L + E A + I R+ V I NP + + ++ H Sbjct: 138 ILKSFEKFRKENIREGADKFFTLLNEIFRHGVIKEYIKSNPMANLNRKELLINKASKNHA 197 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 LE K I L+ I Y G + A +LL RS +R A+W +ID E IW IP Sbjct: 198 TLLETKEIKALVDNIIDYKGYISVKIAAMFSLLTAQRSFSIRSAKWEDIDLENGIWYIPQ 257 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 E KM+ H +PL++Q + +LK+ K+ +F + +S+N Sbjct: 258 E------------DMKMKRAHTIPLNSQCVYMLKKYKEMSINTGYLFYSLRSKSEIISDN 305 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVES---GLWSRDAVERQMSHMARNSVRAAY 353 T+ S R MGY + HGFR M + E+ S D +E ++H+ +N +++AY Sbjct: 306 TIRSMFRRMGYSND-DFTPHGFRAMFSTLAHENRNKHQMSSDIIELCLAHVEKNKIKSAY 364 Query: 354 IHKAEHLEERRLMLQWWADFLD 375 H A +L+E+ +++QWW D+LD Sbjct: 365 NH-ALNLKEKAILMQWWGDYLD 385 >UniRef50_A7ZG37 Symbiosis island integrase n=3 Tax=Campylobacter RepID=A7ZG37_CAMC1 Length = 406 Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 106/363 (29%), Positives = 182/363 (50%), Gaps = 32/363 (8%) Query: 24 KMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKARTFKEVAIEWHGT 83 K + +G YP ITLA+AR + E +L G D + K TFK+VA EW Sbjct: 60 KQIKIGKYPSITLAEARAKALELERLRDRGEDL-----QTATAKQKTITFKDVADEWIDK 114 Query: 84 NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEM-SGRLEVAARLQQR 142 + ++ + +E NL LG++ I ELK RD I+ ++ + + R Sbjct: 115 EQSKELIAFNKQIGRIEKNLIPYLGDKAITELKRRDYAHAIEQIQAREAKRGITHETSLR 174 Query: 143 TTAIMR----YAVQSGLIDYNPAQEMAGAVA---SCNRQHRPALELKRIPELLTKIDSYT 195 T ++R AV G I++NP +++ A S N + E K++ ELL + Y Sbjct: 175 TFRLLRKILDLAVNKGYIEHNPTRDIIFNDAFKTSTNNHFKAITEPKKLKELLGAMQDYQ 234 Query: 196 GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRT 255 G T+ A+ + F+RS+ +R +W +DFE ++ T P E K+R Sbjct: 235 GSFYTQQALIFGVHTFLRSANVRGLKWQYVDFENNLITFPAE------------AMKLRE 282 Query: 256 THLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCG 315 +P+S Q +LK + + + D +F + +P+S++T+N A++ +G+ E+ Sbjct: 283 VFYMPMSKQVKKLLKTMLE-HKRGDFVFPSGISATRPLSDSTLNQAIKRLGFGD--EMVF 339 Query: 316 HGFRTMACSSL---VESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWAD 372 HG RT A + L +++ +S D +E + H R+SV+A Y +++ L+ER ++QWW+D Sbjct: 340 HGLRTTASTLLNENIKNHGFSSDVIELCLDHKERSSVKAIY-DRSQRLDERAKLMQWWSD 398 Query: 373 FLD 375 +LD Sbjct: 399 YLD 401 >UniRef50_B4WZP4 Site-specific recombinase, phage integrase family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZP4_9GAMM Length = 400 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 114/378 (30%), Positives = 193/378 (51%), Gaps = 19/378 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV +G++ W+L YR++G+ K++ LG PE+TL+ AR RDEAR+L+A+G+DP + Sbjct: 26 LYLLVETDGNRTWKLSYRFDGRSKVITLGPCPEVTLSFARQLRDEARELIADGIDPISRC 85 Query: 61 KNDKVEQSKARTFKEVAIEW--HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 +V TF+ VA +W + SE+ R + +E+ L A++G+R ++E+ Sbjct: 86 VKREVFSPSVETFEAVARDWLERVYRLEVSEEQFRRTKRQMENYLIASIGKRVVSEVTPE 145 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 DL + A+ G L+ R+ I +A +G+ Y + + + Sbjct: 146 DLKSLAAALGAEGHLDRGKRVLGIGKRIYTHARDTGVAGYQQTGALRRRLTGSGTEPEFL 205 Query: 179 LELK-RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L + +I +L + + R T A++LT+ + R SE+ ARWS++D +A W I Sbjct: 206 LSTREQILDLASGVLGQWSRTTTTAALKLTVWLLARPSEIVNARWSDMDLDAGEWRIHRN 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 P GSK+ T VPL QA+ +L++I+ G + IF G D K + +T Sbjct: 266 STGSP------TGSKIIT---VPLPRQAVELLREIEPITGRQEYIFPGTRDRKKHLGAST 316 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +++AL+ + T V RT+A ++L E G + Q+ N + Sbjct: 317 LSAALKKVTRTTPVST--DNLRTLAATALGELGYQA-----EQIQSQLLNQTGDEPADRQ 369 Query: 358 EHLEERRLMLQWWADFLD 375 +L++RR MLQ WAD+LD Sbjct: 370 TYLDKRREMLQAWADYLD 387 >UniRef50_D0SVD1 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVD1_ACILW Length = 399 Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 108/385 (28%), Positives = 192/385 (49%), Gaps = 33/385 (8%) Query: 1 MHLLVHPNGSKYWRLQYRY---EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG 57 ++ LV +G K W QYRY EGK + LG YP+++ A++ R +AR+ + + G Sbjct: 34 LYFLVKKSGVKNW--QYRYKNSEGKWAWMGLGAYPQVS---AQLARQKAREF-TSALSKG 87 Query: 58 DKKKNDKV-----EQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERN 111 + K+ KV ++ ++ F+ + EW T + KW E + KS+E ++ G+ N Sbjct: 88 ESLKSKKVLLEERKELESFYFENLMREWLDTKSSKWGEATYTKAQKSIEKHIIPVFGQGN 147 Query: 112 IAELKTRDLLAPIKAVEMS-GRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 E+ ++ + ++ + G +L +A G I+ NP + M+ + + Sbjct: 148 YKEITPKEWFDFFQGLQRTLGIHTQIEKLVSYVRGCYDWAKFKGKINSNPIEGMSKHLDA 207 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 + + + +P LL KI + R + +EL +++F R ELR A+W + DF+ + Sbjct: 208 YESGNMDFVTVDELPALLKKIRNNKKRAIGI-GLELLMMLFPRPGELRMAKWEQFDFKKA 266 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +WT P E +K R H VPLS Q + +L +++ + +F + Sbjct: 267 LWTKPAEM------------TKTRQEHQVPLSKQVITLLTELRSIQPESEFLFPSRLSVN 314 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 K +S+ T N AL +GY K HGFR +A + L ++ +E ++H + V+ Sbjct: 315 KTISDMTFNLALNRLGYKGKQN--PHGFRHLASTILNDAFSDQEQVIEVCLAH-KKKGVK 371 Query: 351 AAYIHKAEHLEERRLMLQWWADFLD 375 Y K++HL+ERR+++QWWAD+LD Sbjct: 372 GVY-DKSQHLDERRVLMQWWADYLD 395 >UniRef50_B7UP04 Predicted integrase n=24 Tax=Proteobacteria RepID=B7UP04_ECO27 Length = 405 Score = 150 bits (379), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 121/387 (31%), Positives = 186/387 (48%), Gaps = 35/387 (9%) Query: 3 LLVHPN---GSKYWRLQYRYEGKQKM--LALGVYPEITLADARVRRDEARKLLANGVDPG 57 L +HP+ G W +Y QK LG YPE+++A+A R+ LA G DP Sbjct: 27 LTLHPSSVKGRGKWVFRYVSPVTQKRRNAGLGTYPEVSIAEAARTARIMREQLAAGDDPL 86 Query: 58 DKKKNDKVEQSKARTFKEVAIEWHGT-NKKW-SEDHAHRVLKSLEDNLFAALGERNIAEL 115 + KK + E+ TF + A H + W + H + L +LE+ F LG + + + Sbjct: 87 EIKKAES-EKVVIPTFADAARRVHAELSPGWENPKHVRQWLSTLENYAFPQLGAKTLDSI 145 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-- 173 D+ ++ V ++ E A+R++QR +M++ G NP + + R Sbjct: 146 TAADVAETLRPVWLTLS-ETASRVKQRIHVVMQWGWAHGFCVANPVDVVDHLLPQKTRGR 204 Query: 174 -QHRPALELKRIPELLTKIDSYTGRP--LTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 +H+PA+ +++P L YT P +TR + + +L RS E R RW+EIDF Sbjct: 205 DEHQPAMPWRQLP-LFVATSVYTDEPYNVTRALLLMVILTATRSGEARGMRWAEIDFHKR 263 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 IWTIP ER K R H VPLS QA+ IL+ I+ G HD + Sbjct: 264 IWTIPAER------------MKARIQHRVPLSRQAMHILENIR---GLHDELVFPSPRKQ 308 Query: 291 KPMSENTVNSALRVMGYDTKVE---VCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 + +S+ + S LR + + HGFR+ E G +SRD ER ++H +N Sbjct: 309 QILSDMVLTSFLRKKKAISDIPGRVATAHGFRSTFRDWCSEQG-YSRDLAERALAHTLKN 367 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFL 374 V AAY H+ + LE+R M+Q WAD++ Sbjct: 368 KVEAAY-HRTDLLEQRVPMMQAWADYV 393 >UniRef50_UPI00016B13C2 phage integrase family protein n=1 Tax=Burkholderia pseudomallei BCC215 RepID=UPI00016B13C2 Length = 324 Score = 150 bits (378), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 78/167 (46%), Positives = 111/167 (66%), Gaps = 3/167 (1%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M LLV PNG+KYWRL YR+ GKQK LALGVYP +TLA AR +RDEAR+ +A G+DPG+ K Sbjct: 19 MFLLVQPNGAKYWRLSYRFLGKQKTLALGVYPAVTLATARKKRDEAREQIAAGIDPGEAK 78 Query: 61 K--NDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K E + A +F+ VA EW + + WS+ +A +VL SLE ++F +G R IAE+ + Sbjct: 79 KEARRAAEIAAANSFEAVAREWFDSQRPGWSDGYAAKVLNSLEVDVFPKIGPRPIAEIDS 138 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM 164 +L+ ++ VE G E A R+ QR+ A+ +Y + +G NPA ++ Sbjct: 139 PQMLSIVREVEARGVRETAKRILQRSRAVFQYGIMTGRCSRNPAADI 185 >UniRef50_B5JZM6 Site-specfic recombinase, phage integrase family n=2 Tax=Rhodobacteraceae RepID=B5JZM6_9RHOB Length = 411 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 111/378 (29%), Positives = 190/378 (50%), Gaps = 28/378 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V +G+K W + GK+ + LG ++LA+AR E RKL G DP K Sbjct: 45 LFLKVVTSGAKRWVQRIVVRGKRTEIGLGSASLVSLAEARETALENRKLARAGGDPLQAK 104 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNK-KW-SEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + TF+E + + H ++ W ++ HA + L +LE F + ++E+ T Sbjct: 105 RTSEA----LLTFEEASRKVHKIHEPTWRNKKHAAQFLSTLETYTFPRMSNLKVSEVTTA 160 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR--QHR 176 D+LA ++ + + + E A R++QR +M++AV +G NPA ++ A+ + +HR Sbjct: 161 DVLAVLQPIWLE-KPETAKRVRQRIGTVMKWAVANGWRQDNPAGAISQALPKQKQPVKHR 219 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 +L + L + S T+ A+ELT+L RS E+R A WSEID + WTIP Sbjct: 220 KSLPYDEVSGCLVAVRSSRAFNATKLALELTVLTACRSGEVRLAEWSEIDLAKAEWTIPA 279 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +R K H +PLS +A+ +L+ K L+F + P+S+ Sbjct: 280 QR------------MKASKEHRIPLSGRAVEVLEAAKALDDGTGLVF--PSTTGNPLSDM 325 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T++ ++ +GYD V HGFRT + E +R+ E ++H +N AAY + Sbjct: 326 TLSKLVKGLGYDVDV----HGFRTSFKTWCQERTTTAREVSEAALAHSIQNKAEAAYA-R 380 Query: 357 AEHLEERRLMLQWWADFL 374 ++ E+RR +++ W+ F+ Sbjct: 381 SDLFEKRRKLMEQWSCFV 398 >UniRef50_C8T7N5 Phage integrase family site-specific recombinase (Fragment) n=11 Tax=Enterobacteriaceae RepID=C8T7N5_KLEPR Length = 188 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 68/161 (42%), Positives = 110/161 (68%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV P GS++W L+YR GK+ +ALG YP ++L+DAR +R+ RK+LA ++P ++ Sbjct: 26 LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 ++ ++ + FK VA+ WH +N+KWS++ A R+L S+ +++F +G ++ELK R Sbjct: 86 AAERGSRTPDKVFKNVALAWHKSNRKWSQNTADRLLASMNNHIFPVIGNLPVSELKPRHF 145 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPA 161 + +K +E G LEVA+R +Q + IMR+AV GLID NPA Sbjct: 146 IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPA 186 >UniRef50_D0CDZ4 DNA integration/recombination/inversion protein n=4 Tax=Acinetobacter RepID=D0CDZ4_ACIBA Length = 402 Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 113/386 (29%), Positives = 193/386 (50%), Gaps = 32/386 (8%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L + +GSKYW Y + GK+ L+LG YPE++L DAR RD+ +KL+ G+DP Sbjct: 33 LYLRIDQSGSKYWIFNYTRPFLGKRNDLSLGTYPEVSLEDARTIRDKYKKLIKQGIDPAM 92 Query: 59 KKKNDKVEQSK--ARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 ++ K ++ K TF+ +A W ++ + ++ L +++ + E +L Sbjct: 93 ERIETKSQKQKEAENTFRVIAELWLH-KRELEQKQDEETIRRLNHDVYPYISELTFPQLT 151 Query: 117 TRDLLAPI-KAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 L + K + G L VA RL+ I + A + LI YNP +++ + + Sbjct: 152 LEILETKVFKRIVERGALSVAKRLKSDLNQIFKSARKKKLIQYNPIEDI--ELPKPQAGN 209 Query: 176 RPAL-ELKRIPELLTKIDSYTG---RPL--TRWAIELTLLIFIRSSELRFARWSEIDFEA 229 PA+ E + + +L KI +Y+ R L T+ A+++++L F R E+R + E Sbjct: 210 FPAVTEEQDLAPMLNKIWNYSKLYPRCLLTTQVALKISVLTFQRPGEIRMLKKEFYYREE 269 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 + SK + H+VPLS QA +++ I + + IF+G D Sbjct: 270 RCFKFT--------------ASKTKQLHIVPLSDQAFDLIESIIDLHPYSEYIFVG-RDG 314 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 +S+NT+NSAL+ +GY E HGFR A + L E D +E Q++H +++ Sbjct: 315 KTVISDNTINSALKRLGYGG--EQTAHGFRATARTMLDEILEQRVDFIEHQLAHKVKDNN 372 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLD 375 AY ++ + L RR M+Q WAD+L+ Sbjct: 373 GTAY-NRTKFLNNRREMMQEWADYLE 397 >UniRef50_C6N3S0 Putative phage integrase family protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N3S0_9GAMM Length = 397 Score = 147 bits (372), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 112/367 (30%), Positives = 182/367 (49%), Gaps = 22/367 (5%) Query: 11 KYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKA 70 K + +++++ K + + +G Y + L AR R ++ +G+DP + KN + +Q K Sbjct: 37 KIFIFRFQWDKKPQTITIGDYRSVGLGAARDIALAYRNMVNSGIDP--RSKNVEADQEKI 94 Query: 71 RTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEM 129 TF+ VA +W K W + +R KSL ++ +G++ I ++ DLL IK E Sbjct: 95 -TFEVVADQWFQKYKGTWKDFARNRHSKSLSRDIIPLIGDKPIDDITKADLLFIIKPHED 153 Query: 130 SGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ-HRPALELKRIPELL 188 G +VA RL R +I +AV S L + P + A+ R ++PA+ E++ Sbjct: 154 LGHHDVAHRLYARLQSIFEFAVGSSLTENFPFIGLKKALIPKPRVINQPAISSNNAHEMM 213 Query: 189 TKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSH 248 I + + +EL +F R +ELR A+WSE D + S W IP ER Sbjct: 214 RVIKQTNSTKIVKVYMELLAHLFTRPTELREAKWSEFDLQKSEWNIPAER---------- 263 Query: 249 RGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH-DSHKPMSENTVNSALRVMGY 307 KM H VPL+ L +LK+++ G +F KP+SE +V L G+ Sbjct: 264 --MKMGIPHWVPLTPHVLNLLKELRLITGFTPYLFSSPALKKAKPISEASVRKLLHNAGF 321 Query: 308 DTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLML 367 K HGFR++A S L E G + DA+E Q++H + VR Y+ +A+ ERR ++ Sbjct: 322 --KNRHTAHGFRSLASSVLHEQGNFRSDAIEAQLAHKVQ-GVRGVYL-RADFKAERRELM 377 Query: 368 QWWADFL 374 W++ +L Sbjct: 378 HWYSSWL 384 >UniRef50_A7JZW2 Site-specific recombinase, phage integrase family protein n=2 Tax=Vibrio sp. Ex25 RepID=A7JZW2_VIBSE Length = 471 Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 112/414 (27%), Positives = 195/414 (47%), Gaps = 56/414 (13%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG- 57 ++L + NGSK W Y K+K + LG YP +TL + R E RK + G+DP Sbjct: 52 LYLRIRKNGSKNWLFIYTDFSTKKRKKMGLGSYPNMTLDEVRKVAKELRKQMTKGIDPKL 111 Query: 58 --DKKKNDKVEQSKARTFKEVAIEW-------HGTNKK----------------WSEDHA 92 +K+K D++ +S+ TFK +A + TN++ + +D Sbjct: 112 FREKQKLDRLVESQL-TFKAIAEKMLLKEEIQETTNREKLIVEERERARIKGTVFGQDEI 170 Query: 93 HRVLKS----------LEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQR 142 R+ L+ NL+ LG + + +++ I+ ++ G+LE R Sbjct: 171 DRITNKVRSSHRKRLFLKRNLYPKLGNLPLTYITAAGVISVIEPMQAKGQLENVKRACCI 230 Query: 143 TTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRW 202 +M++AV S +I N ++ A H + + E++ + + +P+TR Sbjct: 231 ANQVMKFAVNSNIIKSNCLADIKDNFAKSKVTHMLKVPPNELGEVMAIMSNNQMKPVTRC 290 Query: 203 AIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLS 262 A E+ + R+ EL RW +I+ + +WTIP +K + HLVPL+ Sbjct: 291 AFEMQMHTMARADELAAMRWCDINVKNKLWTIPAFY------------TKGKREHLVPLN 338 Query: 263 TQALAILKQIKQFYGAHDLIFIGDHDSHK--PMSENTVNSALRVMGYDTKVEVCGHGFRT 320 L IL+ I+ G H +F D + K +S VNS+L + K + HGFR Sbjct: 339 DYTLGILEFIRPISGEHIHVFPSDKPNTKFPHISPYAVNSSLNLTSL--KGRLVSHGFRG 396 Query: 321 MACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 +A + L E + DA+E ++H+ +N+ RA+Y + A +L+ER +LQ+W+D++ Sbjct: 397 IASTYLNEHKQFREDAIEMCLAHLDKNTTRASY-NSALYLDERYEILQFWSDYI 449 >UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EVM1_ECOLX Length = 396 Score = 147 bits (371), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 120/385 (31%), Positives = 183/385 (47%), Gaps = 28/385 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYP--EITLADARVRRDEARKLLANGVDPGD 58 +++ V P G+ +R Y G+Q+ + G Y ITLA+AR R +EA+K++A+G P Sbjct: 25 LYVAVTPAGTISFRYNYSINGRQETVTFGRYGVGGITLAEARERLNEAKKMVASGRSPAR 84 Query: 59 KKKNDKVEQSKARTFKEVAIEW-HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 +K DK A TF A +W G S R + E L + ++ + E+ Sbjct: 85 EKARDKARIKDAETFGAWAEKWLRGYQMAESTRDMRRSVYQRE--LKSKFAQQKLTEITH 142 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 DL A + G A ++ + R+A++ G NP+ + A + Sbjct: 143 EDLRALTDNIVERGAPATAVHAREIVLQVYRWAIERGQKVENPSDLVRPASIAKFEPRDR 202 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 AL I + ++ P R A++L LL +R SEL A W EI+F ++WTIP E Sbjct: 203 ALTPVEIGLMYRYMERVGTTPSIRAAVKLLLLTMVRKSELTNATWKEINFSEALWTIPKE 262 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R HLV LS QA+ I+ +K F G+ D I +DS PMS T Sbjct: 263 R------------MKRRNPHLVFLSRQAMDIMIALKTFAGSSDFILPSRYDSDAPMSSAT 310 Query: 298 VNSALRVMGY-------DTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 +N L + Y D + H R A + L E+G ++ D +E+ ++H + VR Sbjct: 311 LNRVL-TLTYRLAQKEGDLLPKFGPHDLRRTASTLLHEAG-YNTDWIEKCLAH-EQKGVR 367 Query: 351 AAYIHKAEHLEERRLMLQWWADFLD 375 A Y +KAE+ E+R MLQ WA+ +D Sbjct: 368 AVY-NKAEYREQRAEMLQDWANMID 391 >UniRef50_D1Y3S1 Site-specific recombinase, phage integrase family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3S1_9BACT Length = 433 Score = 147 bits (370), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 116/398 (29%), Positives = 198/398 (49%), Gaps = 47/398 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEG-KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L V PNG K W +YR EG +++ + LG YP + +A AR R++ R + G P D Sbjct: 26 LYLKVCPNGRKVWLYRYRDEGERERKVTLGEYPALDMAAARERKEATRARILRGEAPQD- 84 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + TF++VA W+ KK + + + + LE L LG R + +++ Sbjct: 85 --------TALLTFEQVARRWYEKQKKRGLAPRYLETIRQRLECYLIPPLGARPLEQIQR 136 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYN---PAQEMAGAVASCNRQ 174 +L+A ++ V G +E + R+ + I +YA +G++ A ++ + + Sbjct: 137 AELVAVVEGVAKRGIVESSHRVGVILSQIYQYAEDAGILPGGGALAAASLSRVLPKTKTE 196 Query: 175 HRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 H + + + + +++ I Y G ++R +E L F+RS E R ARW EID EA +WT Sbjct: 197 HFATVSKPEDVRQVMECIRDYRGFAVSR-CLEFIALTFVRSGEARRARWREIDLEARLWT 255 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF--YGAHDLIFI----GDH 287 IP E H R R H VPLS QALA+L+++K G LIF+ G Sbjct: 256 IPAE--------HMKR----RIAHKVPLSRQALALLEEMKPLSCSGPESLIFVSGLTGRS 303 Query: 288 DSHKPMSENTVNSALR----------VMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAV 337 S +++ ++ R G ++ HG R+MA S+++ + + Sbjct: 304 SSSGILTDMSLLRPFREALKRNPERAAAGLKPFPKMTVHGLRSMA-STILNEERQGGELI 362 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 E Q+SH+ + +R Y + +E L++RR ++Q+WAD+LD Sbjct: 363 EIQLSHLDADRIRLIY-NNSELLDDRRALMQFWADWLD 399 >UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria RepID=B2I529_XYLF2 Length = 410 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 109/374 (29%), Positives = 180/374 (48%), Gaps = 20/374 (5%) Query: 5 VHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDK 64 V+P G WR +YR G+ + L LG YP ++L +AR++RDEA L+A G P +K+ K Sbjct: 30 VYPTGGIVWRFRYRLAGRYEKLTLGKYPALSLRNARLKRDEAASLVAMGTSPARQKQLAK 89 Query: 65 VEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPI 124 V + A T ++ A + + + + L+ ++ +G++ + E+ ++ + I Sbjct: 90 VTAADAMTVRDFAERFFREIQSRDRKDSTMPRRYLDKDILPFVGDKPMREVTAEEIRSLI 149 Query: 125 KAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNP--AQEMAGAVASCNRQHRPALELK 182 + G A +++ + YAV GL+ NP A M + +R AL Sbjct: 150 WRKKEQGFDATAGQIRGVLKRLCDYAVTCGLMPTNPVLALPMRHVYKAVSRDR--ALSPD 207 Query: 183 RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIP 242 I L + + R + A+ L LL +R SEL ARW + + + W IP E Sbjct: 208 EIRLFLRAVWASRIRRQFKLALHLILLTMVRKSELLLARWDHVHLDQAQWHIPAE----- 262 Query: 243 GVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSAL 302 HS G H+V LS QA+ + + ++ G L+ G +P + N +N AL Sbjct: 263 ---HSKTGKP----HIVYLSRQAVVLFEALRVLAGGSALVMPGSGTLTRPFAHNALNHAL 315 Query: 303 -RVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLE 361 + M + H R A + L E G W+ D VE+ ++H + VR Y ++AE+ + Sbjct: 316 GKAMQWQGIHAFTIHDLRRTASTWLHEHG-WASDVVEKALNH-SIGGVRGVY-NRAEYAD 372 Query: 362 ERRLMLQWWADFLD 375 +RR MLQ WADF++ Sbjct: 373 QRRQMLQCWADFIE 386 >UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae RepID=A7JSX8_PASHA Length = 413 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 111/378 (29%), Positives = 181/378 (47%), Gaps = 23/378 (6%) Query: 7 PNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKK--N 62 P GSK W Y + L +G YP ITLA+AR D R L+ G+DP ++KK Sbjct: 39 PKGSKIWIFNYTNPQTKNRTNLTIGRYPLITLAEARTICDGYRSLIEKGIDPQEEKKRLQ 98 Query: 63 DKVEQSKARTFKEVAIEW-HGTNKKWSEDHAHRVLK--SLEDNLFAALGERNIAELKTRD 119 + E TF+ VA + +G K+ +++ R LE+++F +G++++ E+K + Sbjct: 99 QEAENRVNDTFRNVAESYFNGIYKEKAKNPITREKNWIRLENHIFPYIGDKHVEEIKVKA 158 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 L+ V + + +L Q +A+M +A+ G+I+ + + P + Sbjct: 159 LVDIYSKV--ADKSNTLKKLHQLVSAVMDHAITQGIIESHNCRLAVKNFYIKPSTPNPTI 216 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 EL+ +P+L T + + T + + L +R +E A W EIDFE +W IP E Sbjct: 217 ELEELPQLFTDLHNAKLSKQTYALVCWSFLTALRPNEAVNAEWKEIDFEKKLWNIPKE-- 274 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 K + K R H VPLS+QAL IL+ +K + +F G + KPMS TVN Sbjct: 275 -----KMKGKADKKRP-HSVPLSSQALKILEMMKMHSNSSPFVFPGRSSNSKPMSNATVN 328 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM--ARNSVRAAYIHKA 357 S L+ GY K + HG R + + S R E +SH+ + + Y ++ Sbjct: 329 STLKRNGY--KDRLTAHGIRAFV-KTFLSSRKVDRHVSESILSHLLEGGDDLENTY-NRY 384 Query: 358 EHLEERRLMLQWWADFLD 375 + LEER ++Q D+ + Sbjct: 385 DFLEERVPVMQLLGDYCE 402 >UniRef50_UPI00016954D2 DNA integration/recombination/inversion protein n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=UPI00016954D2 Length = 252 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/227 (36%), Positives = 135/227 (59%), Gaps = 4/227 (1%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + P+G K WR +YR+ GK+K LALG YPEI+LA+AR R E+R++L +G+DPG+++ Sbjct: 26 LYLEIAPSGGKLWRWKYRFAGKEKRLALGPYPEISLAEARKRHAESRQVLKSGIDPGEQR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K+ + +F + +E KK ++ R + +E +L +GER I E+ Sbjct: 86 KVQKLTRLAHADSSFGAITLELLTMRAKKNAKSTVVRNTRIVEKDLNPYIGERPITEISA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LLA ++ +E G +E A R + + + RY++ +G +NPAQ++ GA+ +H Sbjct: 146 PELLAVLRKMEKRGAVETAHRARGIASMVFRYSIATGRAKHNPAQDLLGALEPTQTEHFA 205 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWS 223 +L E ++ LL I Y G + R A++L L+F R ELR ARW+ Sbjct: 206 SLTEPAQVARLLRAIWGYEGSTIVRAALKLASLLFARPGELRAARWA 252 >UniRef50_A3M8T8 Phage integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M8T8_ACIBT Length = 425 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 118/403 (29%), Positives = 186/403 (46%), Gaps = 42/403 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V P+G K W ++ K+ + G YP I+LA+AR R LLA G++P Sbjct: 25 LYIEVRPSGKKVWIHKFSLNKKEGSITYGEYPSISLAEARYYHARDRALLAKGINPV-AH 83 Query: 61 KNDKVE---QSKARTFKEVAIEW---HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 +N+ +++ TFK+ EW H +K SED+ + L+ +++ +G + + Sbjct: 84 RNETARLALETEQETFKKYGDEWKEKHKIDK--SEDYKKLIEYGLKTDIYPVIGHLHPKD 141 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQ------RTTAI---------MRYAVQSGLIDYN 159 + ++ +L I R+ + R Q+ TTAI MR + GL + + Sbjct: 142 VTSKHVLLIINNT--MERIRTSTRSQKLKPSTGETTAIVNKTFIGMIMRSCIMKGLAEVD 199 Query: 160 PAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRF 219 P + G + H L +K I EL +I Y G TR A+ +R+ E+R Sbjct: 200 PTYAVKGVIKRQKINHARPLSMKEIRELKERIPLYNGAQTTRNALNFLFYTMLRTIEVRR 259 Query: 220 ARWSEIDFEASIWTIPPE--REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYG 277 W+ +D+E T P +E I G R K HL+PLS QA +ILK+ Sbjct: 260 LEWAWVDWENKTITFPERTFQEIIEG----KRAMKNNKIHLLPLSDQAFSILKEQYTITA 315 Query: 278 AHDLIF-----IGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLW 332 +F + K + +T+N AL + + +V H R A + L E G Sbjct: 316 KCQFVFSSPMQLTLGKPEKMLGRSTLNFALDALKMN---DVSPHDARATASTYLNELGSD 372 Query: 333 SRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 R +E+Q+SH + RA Y H A+ L RR MLQW+ADFLD Sbjct: 373 DR-WIEKQLSHTDNDKTRATYNH-AKWLRNRRSMLQWYADFLD 413 >UniRef50_A9VZC1 Integrase family protein n=3 Tax=Alphaproteobacteria RepID=A9VZC1_METEP Length = 412 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 116/383 (30%), Positives = 186/383 (48%), Gaps = 35/383 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V P+GSK W L+ +G+++ + LG +TLA+AR + RKL +G DP Sbjct: 42 LYLVVEPSGSKRWLLRTIVQGRRRDIGLGGAGLVTLAEAREKALAYRKLARDGGDP---- 97 Query: 61 KNDKVEQSKAR----TFKEVAIEWHGTNK-KW-SEDHAHRVLKSLEDNLFAALGERNIAE 114 E+ KAR TF E A + H +K W + HA + + +L LG R + + Sbjct: 98 ---LAERRKARATVPTFAEAAEQVHEEHKASWKNPKHAAQWITTLRTYANPHLGARRVDQ 154 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSG-LIDYNPAQEMAGAVASCNR 173 ++T D+L + + ++ + E A R++QR ++ +A +G NP + +A + Sbjct: 155 IETPDVLRALSPIWLT-KGETARRVRQRIGTVLDWAKAAGHRTGDNPVESVAKGLPKQGE 213 Query: 174 --QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 +H AL +P +T++ S R A E +L R+SE+ A W EID ++ Sbjct: 214 RDEHHAALPYAEVPAFVTRLQSSDHGEAARLAFEFLILTAARTSEVLRAEWREIDEAEAL 273 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 WT+P R K H VPLS ++L I+++ K G IF G + K Sbjct: 274 WTVPAAR------------MKAGREHRVPLSKRSLEIVRRAKLLAGDSAFIFPG-RSTGK 320 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 PMS ALR M K+ V HGFR+ E+ R+ E ++H N V A Sbjct: 321 PMSNMVFLMALRRM----KLTVTAHGFRSSFRDWAAEATSLPREVAEMALAHTIENRVEA 376 Query: 352 AYIHKAEHLEERRLMLQWWADFL 374 AY + + L +RR M++ W+ F+ Sbjct: 377 AY-RRGDLLAKRREMMEQWSTFV 398 >UniRef50_Q0I233 Phage integrase n=5 Tax=Pasteurellaceae RepID=Q0I233_HAES1 Length = 434 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 116/388 (29%), Positives = 193/388 (49%), Gaps = 26/388 (6%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V +GSK WR Y Y K+ +++G YPEI+L AR RDE LLA +DP Sbjct: 50 LFLSVEISGSKIWRFNYYKPYTKKRTEISIGKYPEISLLQARKIRDEYLALLAQNIDPKT 109 Query: 59 KKKNDKVEQSKAR-TFKEVAIEWHG---TNKKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 + + Q+ R TFK V +W+ K +ED R + LE ++F L E ++E Sbjct: 110 HRDQKQNTQALERNTFKYVCAKWYAEIYPTKAPNEDTRARNWQRLERHIFPKLAEIPLSE 169 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQEMAGAVASCNR 173 + R L+ + + S L+ +L + A + Y ++ G+I+ +N +A + Sbjct: 170 ITPRLLIDVYREIGASNTLD---KLHRLVKATLDYGIKLGIIEGHNCNLAKDDFIAPLAK 226 Query: 174 QHRPALELKRIPELLTKIDS-YTGRPL---TRWAIELTLLIFIRSSELRFARWSEIDFEA 229 H PA+ +PELL I++ + L T +A LTLL +R EL W+ ID Sbjct: 227 NH-PAITPAELPELLKAINTAFKEGKLEFNTLFAFNLTLLTGLRQKELTRIEWAFIDDGN 285 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 + IP E +K + + + H++PLS+Q + ++ I+QF G+ +F + Sbjct: 286 KLLIIPSE-----NMKQTRKLREQPKDHIIPLSSQMIKLIGTIRQFNGSSPYLFPRVRNR 340 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSH--MARN 347 +K + +TV++ALR GY K + HG R + S L + G +S E ++H + Sbjct: 341 NKTIGLDTVSNALRDNGYRDKQD--AHGLRVVFRSYLSQIG-FSVVVGELAIAHNSTGKG 397 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLD 375 ++A Y + ++LEER+ Q W D+ + Sbjct: 398 KIQAIY-DRYDYLEERKQAYQAWGDYCE 424 >UniRef50_A8EWJ5 Phage integrase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWJ5_ARCB4 Length = 410 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 100/396 (25%), Positives = 196/396 (49%), Gaps = 42/396 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V PN +K W+ +Y Y GK+K + YP+++L AR +RD +LL +G+DP + Sbjct: 30 LYLEVTPNNAKIWKFRYTYNGKRKKTSFQSYPKVSLKQARKKRDNYNELLFDGIDPIEYY 89 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKS-LEDNLFAALGERNIAELKT 117 K K + +FK + +W K S ++ K+ +E+++ +G + I ++K Sbjct: 90 KEQKELKQIEDTSSFKNIFTQWLEMEKSKSGLAQYQWKKTRIENDILPFIGNKKIKDIKI 149 Query: 118 RDL---------LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA- 167 +D+ AP+ A ++ G L+ +I YA G I+ N ++ Sbjct: 150 QDVTNVLIEKNKTAPVTASKLFGYLK----------SIYSYAKTKGYIEINLLSDINKTH 199 Query: 168 -VASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI 225 ++S P + E + + +L+ I +Y G + A++L L + +R+ L +WS I Sbjct: 200 IISSSQVISYPKITEKENLKDLVNSIYNYQGFYSVKNALKLVLHLPLRAGNLCNLQWSNI 259 Query: 226 DFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG 285 DF+ + I + + K +PL+ + + IL + K + G IF+G Sbjct: 260 DFDNKLLIISRDEMKVK--------DKNFDDFRMPLTDEVINILNEQKSYTGYQKFIFLG 311 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKV---EVCGHGFRTMACSSLVES----GLWSRDAVE 338 ++ P++ + N AL++MG+D +V ++ HGFR SL+++ +S + E Sbjct: 312 TNN-RTPINVESPNKALKIMGFDDEVNGRKITLHGFRG-TFRSLIDTLDIDSNFSFETKE 369 Query: 339 RQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 R + H ++ V AY HK++++ + ++ +W+D++ Sbjct: 370 RALDHHEKSKVVRAYTHKSDYINQLIPLMNFWSDYI 405 >UniRef50_C1D7T3 Integrase n=2 Tax=Laribacter hongkongensis HLHK9 RepID=C1D7T3_LARHH Length = 416 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 116/394 (29%), Positives = 190/394 (48%), Gaps = 36/394 (9%) Query: 8 NGSKYW--RLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKV 65 G+ W R K++ L LG YP IT+ A + AR L+ G+DP D K+ + Sbjct: 35 KGTGRWIFRFTSPTSKKRRDLGLGKYPAITIKQAGELGEAARLLVLQGIDPIDHKREQEA 94 Query: 66 EQSKAR---TFKEVAIEWHGT-NKKWSEDHAHRV-LKSLEDNLFAALGERNIAELKTRDL 120 A TF++ AI H T + WS HA + SL ++F +G++ +A+L RD Sbjct: 95 AAEAANERITFEQAAIHTHETLSPGWSNRHASADWINSLRRHVFPKIGDKPVADLVRRDF 154 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV------ASCNRQ 174 A + + + E AAR++QR +M + + LI N + + + Sbjct: 155 AAVLLPIWLV-LPETAARVRQRMQTVMEWCLARDLIAANQCDSALSRLLPKQPSKAEREE 213 Query: 175 HRPALELKRIPELLTKIDSYTGRPLT--RWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 H PA+ + +P + GRP++ R +E +L RS E+R W E+D A +W Sbjct: 214 HHPAMPWRLLPAFVAA-HLGEGRPVSVARPMLEFLILTAARSGEVRGMVWDEVDLSAKVW 272 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 TIP ER K TH VPLS +A+AIL+Q ++ + ++F + + Sbjct: 273 TIPGER------------MKAGATHQVPLSDRAMAILRQQRERHPFSAMVFPPNRG--RV 318 Query: 293 MSENTVNSALRVMGYDTKVE---VCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 +S+ T+ L + + E HGFR+ +E G + + E+ ++HM +N V Sbjct: 319 VSDMTLTRYLHEVDAPSDTEGRHATVHGFRSTFKDWAIEHG-YPGELSEKALAHMIKNKV 377 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRERFIS 383 AAY H++ LE+RR ++Q WAD+++ R I+ Sbjct: 378 EAAY-HRSSQLEQRRALMQAWADYVESGRAGGIT 410 >UniRef50_A4BQA0 Prophage CP4-like integrase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BQA0_9GAMM Length = 291 Score = 140 bits (354), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 94/267 (35%), Positives = 142/267 (53%), Gaps = 18/267 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WR +YR G++K L+LG P++ LA+AR + +AR+L DP K Sbjct: 25 LYLFVTPTGGKLWRGKYRVNGREKTLSLGPCPKVGLAEAREKWQDARRL----DDPSAVK 80 Query: 61 KNDK-VEQSKARTFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + +K S TF VA EW W+ HA +V +SLE ++ LG R I E++ R Sbjct: 81 QVEKQASDSTTPTFLAVAKEWRTRQTPGWTRKHASQVWRSLEIDILPTLGPRPIDEIQPR 140 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 +++A I+ +E G E+A R+ QR A+ AV G + NPA E+ + + + A Sbjct: 141 EIMALIEGIEDRGAGEIATRVLQRVRAVFSRAVALGYREANPAGELHNHLKPRKKGQQTA 200 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L + +P L +++Y G TR + L +L R+SE+R A+W+E+D E +WT+P ER Sbjct: 201 LATEELPTFLHALETYQGDAATRLGLRLLILTLARTSEVREAKWAELDREEGVWTVPGER 260 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQA 265 K R VPLS Q Sbjct: 261 ------------MKNRREQRVPLSQQG 275 >UniRef50_C8Q013 Phage integrase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q013_9GAMM Length = 455 Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 116/396 (29%), Positives = 189/396 (47%), Gaps = 33/396 (8%) Query: 1 MHLLVHPNGSKYWRLQYRY--EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L+V PN +K W +Y GK + ++ G+YP ITLA A E + LL+ +DP D Sbjct: 33 LYLMVRPNETKSWLFRYTSPNTGKSQRISFGIYPSITLARAHDIWQEYQDLLSKNIDPRD 92 Query: 59 KKKNDK--VEQSKARTFKEVAIEWHGTNKKWSEDHAHR----VLKSLEDNLFAALGERNI 112 +K K + ++ RTF A E+ T K + + + LK L+D + E I Sbjct: 93 NRKAVKQALLENDDRTFGRFADEYFDTLKTILKPNTLQRKLNCLKLLKD----SFAETPI 148 Query: 113 AELKTRDLLAPI-----KAVEMSGR-LEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG 166 E+ +L+ + + V+ G+ E A R + I +YA G +PA + Sbjct: 149 DEITPPQMLSMLIDVQNQFVKADGKPTEKAERCASIASDIFKYASARGFCSTDPASMVKS 208 Query: 167 AVASCNRQHRPA-LELKRIPELLTKIDSYTGR--PLTRWAIELTLLIFIRSSELRFARWS 223 + HRPA ++ + +LL IDS + T ++ L ++F+R+ +LR RW+ Sbjct: 209 QLIKPVYGHRPAIIQPDKFAKLLQDIDSLKDKVDSNTNSSLRLLPMLFVRNGDLRRMRWA 268 Query: 224 EIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF 283 ++DF + W +P+ G H M +VPL QA+ IL+ + G + +F Sbjct: 269 DLDFNEAKWRF----QPLKGEGKEH----MVRDMVVPLPRQAIEILQHQYKINGHSEFVF 320 Query: 284 IG-DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMS 342 + +S+NT N L+ +GY C HGFR A + L E + VE + Sbjct: 321 YSPSAKKNGIISDNTANKHLKELGYQN--VHCVHGFRASAKTMLQEQLKYPAVIVEMGLG 378 Query: 343 HMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNR 378 H+ ++ AY + E LE+R M+Q WAD+LD R Sbjct: 379 HITKDQNGTAY-GRFEFLEDRAEMMQTWADYLDALR 413 >UniRef50_A5G0X3 Putative uncharacterized protein n=2 Tax=Acidiphilium cryptum JF-5 RepID=A5G0X3_ACICJ Length = 268 Score = 140 bits (353), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 84/241 (34%), Positives = 133/241 (55%), Gaps = 6/241 (2%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV P G K WR +Y+ GK K+L++G Y E+ L+ AR RDEAR L G DP + Sbjct: 25 LYLLVTPAGGKLWRFRYKIGGKDKLLSIGPYSEVMLSAARDARDEARAGLRAGRDPSLVR 84 Query: 61 KNDKVEQSK-ARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K + + + R F++VA +WH NK +W+E H V+ SLE +F LG ++A + Sbjct: 85 KQLRAQAANDDRKFEKVACDWHTLNKSRWTERHTADVMISLEQMVFPLLGNVDVAVITPP 144 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 +L I+ +E LE A R++QR +AI +A+ GL +PA + A+A + +PA Sbjct: 145 MVLDVIRRIEARPALETARRVRQRMSAIFLFAMGLGLATTDPAAVIQKAMAPMTKGRQPA 204 Query: 179 -LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE---IDFEASIWTI 234 + L+ E L ++ P+TR A+ L +R E+ RW+E ++ + +W I Sbjct: 205 VVTLEEAREALAACEAIPAHPVTRLAMRFLALTHVRPGEVHGTRWTEFEGLEGDEPLWLI 264 Query: 235 P 235 P Sbjct: 265 P 265 >UniRef50_Q2NDX8 Site-specfic recombinase, phage integrase family protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NDX8_ERYLH Length = 396 Score = 140 bits (353), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 111/380 (29%), Positives = 184/380 (48%), Gaps = 27/380 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L+V +G+K W L+ +++GK++ + LG E+ A+AR + EARK++ G DP K Sbjct: 35 LQLVVKASGAKSWILRVQHDGKRRDIGLGPLSEVGPAEAREKAVEARKVIRGGGDPSGLK 94 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRV--LKSLEDNLFAALGERNIAELKTR 118 + TF+E+A +H +K ++ HR L +L+ F G++ + + +R Sbjct: 95 SGSGRISGRPPTFRELATSYHDDHKSSWKNAKHREQWLSTLDTYAFPIFGDQPVDRVDSR 154 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYN-PAQEMAGAVASCNRQ--H 175 D+L +K + + + E A R+ QR ++ YA G ++ P Q + A+ Q H Sbjct: 155 DVLDCLKPI-WNAKPETARRVLQRVLRVLNYAHGMGHREHEAPTQSIRAALGKQRSQVRH 213 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 +L +PEL+ K+++ +G + A+ +L RS E+R A+W+E+D WT+P Sbjct: 214 HASLPYAEMPELMAKLEAASG--VGAMALRFAILTAARSGEVRGAQWNEMDLAKKTWTVP 271 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 ER K R H VPLS ALAIL+ K + F+ +S+ Sbjct: 272 AER------------MKARRAHAVPLSPAALAILEDAKGLRKKPEG-FVFPSSRGIALSD 318 Query: 296 NTVNSALRVMG-YDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 T+ A+R +T V C FR A E A E ++H N AAY Sbjct: 319 MTLLKAIRAASDQNTTVHGCRTSFRVWAA----EKTSCPAAAAEAALAHTIHNKAEAAY- 373 Query: 355 HKAEHLEERRLMLQWWADFL 374 H+ ++L+ RR ++ W FL Sbjct: 374 HRTDYLDIRRQLMADWGAFL 393 >UniRef50_D1D4Y4 Site-specific recombinase n=19 Tax=Neisseria RepID=D1D4Y4_NEIGO Length = 406 Score = 137 bits (346), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 110/385 (28%), Positives = 190/385 (49%), Gaps = 40/385 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V+P G + W+L + +G+Q+ ++LG YP+ +LA+AR R+E R+ A+G + Sbjct: 39 LALWVYPTGRRSWKLSFMQDGRQQTISLGRYPDFSLAEAREWREEVRRKRAHG----ENV 94 Query: 61 KNDKVEQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 N KV A F++VA +W +K SE +A +V+++ E +F A+G +I +++T D Sbjct: 95 VNKKVRADFA--FEKVARDWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTAD 152 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNP-AQEMAGAVASCNRQHRPA 178 ++ ++ +E G ++ + + + +AV SG++D NP AQ +G ++ A Sbjct: 153 VVGCLRVMEARGIVDTLRKTKNSLKMVFAFAVGSGMMDINPVAQIGSGVFERVKTKNMTA 212 Query: 179 LELKRIPELLTKIDS------YTGR----PLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 L +P L+ ++ Y GR P+TR+ I LL R E WSE+D E Sbjct: 213 LSPSELPRLIDFLEQRNEFAVYAGRVHIHPVTRFCIYWLLLTMTRIREAALMEWSELDGE 272 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG-DH 287 +W IP ER+ K R H VPLS +L Q + +F + Sbjct: 273 --VWRIPAERK------------KERRGHDVPLSRAMRWVLDQARGLNVNGRFVFESVNF 318 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 H +++ + + A+R G DT HG R++A + L E D E+ ++H Sbjct: 319 QGH--INKESPHVAMRRSGLDT----TAHGLRSLARTYLREVLKVYNDVAEKLLAHSLGT 372 Query: 348 SVRAAYIHKAEHLEERRLMLQWWAD 372 + AY +++E EER+ + W + Sbjct: 373 RTQTAY-NRSELWEERKDAPERWGN 396 >UniRef50_D1Y2Y2 DNA integration/recombination/inversion protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2Y2_9BACT Length = 406 Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 115/400 (28%), Positives = 188/400 (47%), Gaps = 51/400 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + G K W ++ G+++ + +G YP ++L +AR RD+ + GV Sbjct: 25 LYLRISTKGKKKWLIRSFVGGRERKVVIGEYPVMSLQEARRERDDRKMKARTGVSI---- 80 Query: 61 KNDKVEQSKARTFKEVAIEW-HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 ++K TF +V W K S DH + + +E L L R +A++ + Sbjct: 81 ------RNKTVTFGDVFARWLKKKEKAVSPDHYKIIKRRIEMYLLPYLANRPVADISRPE 134 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN-RQHRPA 178 LL ++ G ++ A R +I+ A G + N A +++ ++ R + A Sbjct: 135 LLEVLQHPIERGLIDTARRTGALARSILDAAADKGEVALNIAADLSRSLPEWEVRNFKSA 194 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 + + + LL ID Y R + R+A+ + F+R SELR A W+EI + W IP Sbjct: 195 FDPREVRRLLLAIDCYP-RQIVRYALRMVSYTFVRRSELRRATWAEIHEDE--WHIP--- 248 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 V H +K + +VPLS QAL IL +++ + + G KP+ +T Sbjct: 249 -----VVH----AKKKRIQIVPLSRQALEILDAMRRI---AQIRWKGQPFEDKPIFPSTR 296 Query: 299 NS--------------ALR-----VMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVER 339 N+ AL+ V DT + HGFR MA S+L+ W +A+ER Sbjct: 297 NTPSGSPYMGISAMEVALKWLVAHVPAPDTPPLIDLHGFRHMA-STLLHEHHWDHEAIER 355 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 Q+SH+ R+ A Y K++ L RR M+QWWAD+LD +E Sbjct: 356 QLSHLKRDKTEATY-DKSKLLPLRRRMMQWWADYLDAVKE 394 >UniRef50_C5V760 Integrase family protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V760_9PROT Length = 384 Score = 133 bits (335), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 100/385 (25%), Positives = 180/385 (46%), Gaps = 45/385 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +H+ + G+K +R + + +GK K++ LG + +TL AR R + + NG+DP + Sbjct: 29 LHVHISVVGTKTFRFKTKLDGKAKIIKLGDFKHMTLEQARQRAFDLNVQIQNGIDPTVQI 88 Query: 61 KNDKVEQSKARTFKEVA---IEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +TF EV+ + W +E + + L+++L A +I E+ T Sbjct: 89 ------VPEFKTFAEVSKEFVAWKRDEFGRAEGTIRKYQECLDNDLLPAFANTSIKEIHT 142 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++ +A I+ + ++ +M +A+Q G D ++G + + +P Sbjct: 143 KESVAVIEKINARSNSLAIKNIEMLNMVVM-FAIQRGYRDSYTQLNLSGLIK--EKPVKP 199 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + + + KID Y + R AI + +F+R SE+ RW EIDFE W +P + Sbjct: 200 KIMPSSLKDTFDKIDQYPTF-IMRCAITIQFHVFLRGSEIMGGRWEEIDFEKKQWVVPAD 258 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R KM+ TH+VPL++Q + +L ++K G +F S + + + Sbjct: 259 R------------MKMKRTHIVPLTSQTIELLTKLKSATGDSAFLF-PSSKSVEHIGRDA 305 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRD------AVERQMSHMARNSVRA 351 ++ A R +++ HG RT+A G W R+ VE Q+SH N + A Sbjct: 306 LSKAFRA----ADLKIVPHGCRTLA-------GTWMRNNKYLPHLVETQLSHCESNQIAA 354 Query: 352 AYIHKAE--HLEERRLMLQWWADFL 374 AY + +L+ERR M+Q W++ L Sbjct: 355 AYQTEPHMLYLDERRGMMQEWSNHL 379 >UniRef50_Q1QAC1 Phage integrase n=2 Tax=Psychrobacter RepID=Q1QAC1_PSYCK Length = 448 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 110/394 (27%), Positives = 191/394 (48%), Gaps = 29/394 (7%) Query: 1 MHLLVHPNGSKYWRLQYRY----EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP 56 + L+V P +K W YRY KQ ++++G+YP I+ A A E LL+ G+DP Sbjct: 32 LFLMVRPTETKSW--MYRYYPPSNPKQSIISIGIYPSISYARACEVWREYEDLLSKGIDP 89 Query: 57 GDKKKNDK---VEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIA 113 +++ K + ++K +F A E+ T ++ + + K + + + +G I+ Sbjct: 90 KIHREDIKKSFISKTK-NSFNHFAWEYFDTLEQSQKGNTLIRKKGRLELICSYIGNEPIS 148 Query: 114 EL---KTRDLLAPIKAVEMSGR---LEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA 167 E+ + ++L I+A ++ + A R + + YA G NPA + Sbjct: 149 EIGSPRMLEVLLDIQAKSLNKDDKPTDKAERCAGIASDVFVYANARGFCSSNPAALIKSQ 208 Query: 168 VASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 +A + HRPA+ + K + +LL I++ G P T ++ L L+F+R+ +LR W ++D Sbjct: 209 LAKSSYGHRPAVTKPKDLAKLLRAIETIEGDPNTINSLRLLALLFVRNGDLRRMCWIDLD 268 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 EA W + P + M +VPL QA+AIL++ ++ G +F Sbjct: 269 LEAGRWRLKPLK--------GQGKVNMVKDMVVPLPRQAVAILREQQKINGHTKYVFFSQ 320 Query: 287 H-DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 H+ +S+ T N L+ +GY K C HGFR A + L E + VE + H Sbjct: 321 TAKKHQIISDATANKRLKDLGY--KDIHCAHGFRATAKTILQEQLKYPLVLVEMALGHTT 378 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 ++ AY + E++++R M+Q WAD+LD RE Sbjct: 379 KDPNGTAY-GRFEYIDDRSDMMQKWADYLDALRE 411 >UniRef50_C7I5J5 Integrase family protein n=2 Tax=Thiomonas intermedia K12 RepID=C7I5J5_THIIN Length = 401 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 107/380 (28%), Positives = 180/380 (47%), Gaps = 34/380 (8%) Query: 8 NGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQ 67 GS W +Y GK +LG +TLADA + E R + G D + + V Sbjct: 33 GGSALWTFRYMVAGKASEQSLGPISALTLADALAKAAEVRAKIRRGEDFA-LRPSATVVP 91 Query: 68 SKARTFKEVAIE-WHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIK 125 + + TF+EVA++ W W + HA + + +L F G + ++E+ T ++LA + Sbjct: 92 TPSDTFEEVALQLWESMKPGWKNPKHADQWINTLRMYAFPRFGRKAVSEIGTEEVLAALT 151 Query: 126 AVEMSGRLEVAARLQQRTTAIMRYAVQSGL-IDYNPA------QEMAGAVASCNR-QHRP 177 + + + E A RL+QR A++ A GL NPA + ++ R +H Sbjct: 152 PIWQT-KHETATRLRQRIEAVLSAAKARGLRAGENPAAWRGHLNALLPTISKKRRVKHFE 210 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 A++ + +P + ++ ++ WA++ T+L +R+ + WSEID E +W IP E Sbjct: 211 AMDWREVPAFMAQLRQRAN--MSAWALQFTILTALRTGTVIGTPWSEIDLERRLWVIPAE 268 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K + H VPLS QA+ +L+ + + G+ D +F G + KP Sbjct: 269 R------------MKAQVEHRVPLSRQAVELLQALPRQEGS-DWVFWG---ARKP---TI 309 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 N A+ + + + HGFR+ ES + VE ++HM N V AAY + Sbjct: 310 SNMAMLELLRGMRPGLTVHGFRSSFSDWAAESTHFPSQTVEMALAHMITNQVEAAY-RRG 368 Query: 358 EHLEERRLMLQWWADFLDVN 377 + +E+RR ++Q W D+LD Sbjct: 369 DLIEKRRELMQAWGDYLDFG 388 >UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3P2_BURTA Length = 409 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 109/393 (27%), Positives = 187/393 (47%), Gaps = 42/393 (10%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 + LLV PNG KYW+ +Y + +G++ ++ +G YP ITL AR R+E R + G DP Sbjct: 29 LALLVKPNGLKYWQFRYMKPDGREGLIQIGPYPRITLEAARAARNEHRVAVQGGDDPATL 88 Query: 60 KKND----KVEQSKARTFKEVAIEW-HGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIA 113 +K + K++ ++A FK+ A + + +W + H + +L + +G A Sbjct: 89 RKQEKARRKIDAARALNFKQCATAFIEARSAEWVNPKHTQQWTNTLSTYAYPIIGALRPA 148 Query: 114 ELKT---RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPA-------Q 162 ++ T R +L PI + E A+R++ R +++ +A GL D NPA Q Sbjct: 149 DIDTDLVRKVLEPIWLTKN----ETASRVRGRIESVLDWAKVRGLRDGENPARWSGHLDQ 204 Query: 163 EMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARW 222 +A +H AL I + ++ G A+E T+L +R+ E+ AR Sbjct: 205 LLAAPGKVQKPKHHAALPFTEIGAFVAELRGMVGTAAR--ALEFTILTAMRTGEVIGARH 262 Query: 223 SEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLI 282 E D +A +WT+P ER K + H VPLS+ AL +LK + A + Sbjct: 263 DEFDADAQLWTVPAER------------MKAKRAHRVPLSSSALELLKTLPT--SADSPV 308 Query: 283 FIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMS 342 + +P+S + L+V+ + + HGFR+ E +S + VE ++ Sbjct: 309 VFEGMRARRPLSNMAM---LQVLERMKRGALTVHGFRSTFRDWAAECTPFSNEVVEMALA 365 Query: 343 HMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 H R+ AAY + + ++RR ++Q WAD ++ Sbjct: 366 HAIRDKTEAAY-RRGDLFDKRRTLMQAWADHIE 397 >UniRef50_Q1N9F3 Putative integrase prophage protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9F3_9SPHN Length = 443 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 112/399 (28%), Positives = 191/399 (47%), Gaps = 29/399 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G K+WR +YR K+K L LG YPE+ L AR EARKL++ G DP +K Sbjct: 26 LFLHVTSAGGKFWRYRYRIGPKEKTLTLGRYPEMGLVAAREAHHEARKLVSEGKDPALEK 85 Query: 61 KNDKVEQSKAR--TFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K+ + +A TF+++A EW + WS +A RV E +L+ G I ++++ Sbjct: 86 QKAKIARIEAAKITFRKLAEEWLADQEPIWSVSNAKRVRHRFERDLYPLFGNLPICQIES 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYN---PAQEMAGAVASCNR- 173 +L ++ +E G +E A R++ ++ R A GL+D+ E+ A+ R Sbjct: 146 APILRALRKIEARGSIETAKRVRGYIKSVFRRAKGEGLVDHAILLEIDEIKDALKPARRG 205 Query: 174 QHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE---IDFE- 228 +PAL E+ E +D T + A L L +R LR A WSE ID++ Sbjct: 206 SKQPALTEVPETLEFQKAVDRSTSSLTVKLASRLLALTLVRVGVLRTALWSEFEGIDWDN 265 Query: 229 ------ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLI 282 A IW IP R + +G+ H VPL QA+ +L+ ++ G L+ Sbjct: 266 PDAIPNAPIWRIPASRMKL---DVEDKGNPA-FGHDVPLPHQAVEVLRALRPLTGGFALL 321 Query: 283 FIGDHDSHKPMSENTVNSALRVMGYDT-KVEVCGHGFRTMACSSLVE-SGLWSRDA---- 336 F +PMS+ +++ + MG K + HG+R+ + + E + RD Sbjct: 322 FPNSKSWREPMSDAALSTMYKRMGGGRYKNVMVPHGWRSSFSTIMNERAAELERDGDRMV 381 Query: 337 VERQMSHMARNSVRAAYIH-KAEHLEERRLMLQWWADFL 374 ++ ++H+ + + + ++ + + R ++Q WAD + Sbjct: 382 IDLVLAHVPPGVSASEWSYNRSRYRKPRGTLIQIWADLI 420 >UniRef50_D1AZM1 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZM1_SULD5 Length = 416 Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 108/394 (27%), Positives = 190/394 (48%), Gaps = 39/394 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + +L+HP+G K W Y K++ G YP+ TL +AR +R+ L+ G+DP D Sbjct: 32 LRILIHPDGRKIWEFVYTSPTLYKKRKSTFGTYPKTTLKEARDKRETYLNLIKQGIDPID 91 Query: 59 KKKNDK--VEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDN-LFAALGERNIAEL 115 ++ +K V+ K F V W + + ++ ++L D + L ++IAE+ Sbjct: 92 AQREEKAEVKLQKESDFSNVVNLWFQSQESHIVHSTYKKKRALFDTTVIPVLKHKSIAEI 151 Query: 116 KTRDL--LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYN--PAQEMAGAVASC 171 K +L + IKA++ E A RL + ++A G D+N P + Sbjct: 152 KHDELVQIIKIKAIQTP---ETAKRLLGYFHDLWQFACTHGYCDFNIVPNIHAKSVLPKI 208 Query: 172 NRQHRPALELKRI-PELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 ++H + I +L+ I +Y G T+ A++ L + +R+ L +W+ +DFE Sbjct: 209 VKKHYACITDPSILKQLVNSIYTYGGHISTKNALKFVLHVPLRAGNLVSLKWAYVDFEKH 268 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAH-DLIFIGDHDS 289 + TIP + +K ++PLS +A+AIL++ + Y +H + +F+ D+ Sbjct: 269 LITIPRKE----------MKAKSGDDFILPLSDEAIAILQE-QYLYTSHKEFVFVADNGL 317 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCG-----HGFRTMACSSLVESGLW----SRDAVERQ 340 H + E T + AL+ MG++ E G H FR SLV++ S +A E+ Sbjct: 318 H--IDEVTPSRALQRMGFNN--ETLGNKQRLHSFRA-TFRSLVDTHQMEHRSSYEAKEKV 372 Query: 341 MSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 + H+ + V AY KA + EE RL+L WW+ ++ Sbjct: 373 LDHIVGSGVERAYTQKAIYTEEMRLLLTWWSGYI 406 >UniRef50_Q12EX0 Phage integrase n=5 Tax=Proteobacteria RepID=Q12EX0_POLSJ Length = 410 Score = 132 bits (331), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 113/395 (28%), Positives = 185/395 (46%), Gaps = 49/395 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HL V P+G++ W L+ +K + LG YP++TLA AR AR + GV+P +++ Sbjct: 30 LHLWVKPSGNRSWILRVLVGAIRKDIGLGGYPDVTLAGARDAARRARDQILQGVNPIEQR 89 Query: 61 KNDK----VEQSKARTFKEVAI--------EWHGTNKKWSEDHAHRVLKSLEDNLFAALG 108 + K +Q+KA+TFK+ + EW + H L++ L Sbjct: 90 RQAKALLMADQAKAKTFKDCSAAFIEDRGDEWRNPKHR---QQWHNTLETYAFPFIGGLF 146 Query: 109 ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL-IDYNPA------ 161 R+I+ ++L PI + E AAR++ R ++ +A G NPA Sbjct: 147 VRDISLAHVLEVLRPI----WKTKTETAARVRGRIETVLDWAAVRGYRAGDNPARWKGHL 202 Query: 162 -QEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFA 220 Q + +H A+ L + + + G + A+E +L RS E+R A Sbjct: 203 DQVLPKPSKVKKVEHHSAVGLDDLAGFIAAVRRVPG--MGARALEFAILTAARSGEVRGA 260 Query: 221 RWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD 280 WSE D +A+ W +PPER K H VPLS QA+ +LK I +F G+ D Sbjct: 261 LWSEFDLKAAQWIVPPER------------MKAGEEHRVPLSKQAIKLLKSIPRFEGS-D 307 Query: 281 LIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQ 340 ++F G + +S+ T+++ +R M +V HGFR+ E + R+ E+ Sbjct: 308 VVFCGIKG--QVLSDMTLSAVMRRM----EVNAVPHGFRSTFRDWASERTNFPRELAEKA 361 Query: 341 MSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 ++H + V AAY + + L +R M+Q WADF + Sbjct: 362 LAHTIESKVEAAY-RRGDLLAKRMQMMQAWADFCE 395 >UniRef50_B8F737 Phage integrase family site specific recombinase n=4 Tax=Pasteurellaceae RepID=B8F737_HAEPS Length = 416 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 108/397 (27%), Positives = 189/397 (47%), Gaps = 38/397 (9%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L+V +G+K + Y Y + +G YPEI+L AR +AR LLA +DP Sbjct: 28 LRLIVRKSGAKVFVFNYYKPYTKTRTNFTIGEYPEISLIQARKEHAKARALLAQNIDPVR 87 Query: 59 KKKNDKVEQSK--ARTFKEVAIEWHGTNKKWSEDHAHRVLKS----LEDNLFAALGERNI 112 +++ DK EQ+ TF+++A++W ++K D + R K + ++ G I Sbjct: 88 QRELDKQEQANRLELTFEKMAVKWF-EDRKLKADFSERTAKDTWALFKRHILPHFGNYPI 146 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 +E+ + +K +E +G+LE + + +MRYA+ GLI N ++ Sbjct: 147 SEITPLIAINALKPLERAGKLETIRKTIAKINEVMRYALHRGLIATNNLSDIGKEFDKPT 206 Query: 173 RQHRPALELKRIPELLTKIDSYTGRPLTR------WAIELTLLIFIRSSELRFARWSEID 226 Q ++ + E L Y R R +A+ L LL R SE+ A+W +ID Sbjct: 207 PQSMNTIQPDELAEFLQAF--YQKRDKGRFGLNVFYAVMLVLLTGGRPSEIAKAKWEDID 264 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD------ 280 + +W ++ G K+ G TH+V LS Q++ +L +++ F + Sbjct: 265 EKERLWAYQVQK----GNKNLPEGR----THIVTLSRQSIELLNKMRHFNEVVNANIQSP 316 Query: 281 LIF--IGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVE 338 +F + + E + ++ +G D + HG R + +SL E ++ D +E Sbjct: 317 FVFASVASKKTGHLSIETMRKAIIKSIGED---RLTTHGIRHLFSTSLNEQN-FNADWIE 372 Query: 339 RQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 R +SH RN +R +Y +KA +LE+R MLQ WAD+++ Sbjct: 373 RALSHKDRNRIRGSY-NKANYLEQRFDMLQHWADYVE 408 >UniRef50_A5UG79 Prophage integrase n=1 Tax=Haemophilus influenzae PittGG RepID=A5UG79_HAEIG Length = 339 Score = 131 bits (329), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 103/353 (29%), Positives = 170/353 (48%), Gaps = 28/353 (7%) Query: 26 LALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKARTFKEVAIEWHGTNK 85 ++LG +P+++LA AR E R L+ +DP + + + +E+ K TF E+AI W Sbjct: 1 MSLGAFPDLSLAYAREIATEYRGLILRNIDPLEYRNSSNIEEKKT-TFAEMAIRWRDKRL 59 Query: 86 KWSE---DHAHRVLKSLEDNLFAALGERNIAELKTRDL---LAPIKAVEMSGRLEVAARL 139 K + + + + +E +LF + + I + + L L+P+K ++ +A Sbjct: 60 KLGKLKPETVNDAFRRVELHLFPKIADLPIDQANYKTLEPVLSPLKNSNTLYKINIA--- 116 Query: 140 QQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPL 199 I R A LI NP +++ ++ P L + +P L + Sbjct: 117 ---INQIFRMAEDEDLIVKNPFRKIHDEFTYVETKNHPTLAPEELPRLFEVMQGANLEKP 173 Query: 200 TRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLV 259 T IE LL +RSSE W++ID++A IP ER + G K SH V Sbjct: 174 TALLIEWQLLSILRSSEAVSIEWADIDWDAKALHIPAER--MKGGKRSHS---------V 222 Query: 260 PLSTQALAILKQIKQFYGAHDLIFIGDHDSH-KPMSENTVNSALRVMGYDTKVEVCGHGF 318 PLS QAL IL+Q++++ G +F + +PM+ N AL+ MG+ K + HG Sbjct: 223 PLSRQALNILEQMRRYNGNRKYVFCSRIAPYNRPMNSGAANVALKRMGF--KGLLVAHGL 280 Query: 319 RTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWA 371 R++A + L E +S +A+E +SH R VRAAY K++ R+ ++Q W Sbjct: 281 RSIASTYLHELDRFSSEAIELCLSHENRGKVRAAY-DKSKKWRSRQEIMQTWG 332 >UniRef50_C5F036 30S ribosomal protein S15 n=3 Tax=Campylobacterales RepID=C5F036_9HELI Length = 397 Score = 130 bits (327), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 108/396 (27%), Positives = 186/396 (46%), Gaps = 52/396 (13%) Query: 1 MHLLVHPN--GSKY-WRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG 57 +++ V+PN G+ Y + YR K ++ LG YP I+L DAR++ +E L Sbjct: 28 LYVEVNPNKYGATYTFYFCYRQSNKVNVVYLGKYPAISLMDARLKANELNLRL------- 80 Query: 58 DKKKNDKVE-----QSKARTFKEVAIEWH--GTNKKWSEDHAHRVLKSLEDNLFAALGER 110 DK + K+E ++K R +E+ EW K ++D A + LE ++ G + Sbjct: 81 DKNEVLKIETRREKRNKERILREIFEEWKQIAIKGKINQDFA----RPLELHIINQYGNK 136 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA----- 165 +A+L +D+L + + + E R +++YA+ DY A + Sbjct: 137 PVADLTKQDVLKSFDKLYLEDKRETIKRTYIHLKNLIKYALNR---DYLQATNLLTLDID 193 Query: 166 ---GAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARW 222 G + R +L +LL IDSY G + A++++ +F+RSS +R +W Sbjct: 194 TLYGKLTPT--PFRAITDLDTFRDLLLAIDSYNGNLFVKVALQVSPYLFLRSSTMRNLKW 251 Query: 223 SEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLI 282 +D + I IP K + LVPLS L + IK+ I Sbjct: 252 EYLDEKEKILKIPAN------------IMKAKEEFLVPLSDSVLDKILAIKELTYPSPYI 299 Query: 283 FIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSR---DAVER 339 F D K ++ENT+N A++ +G+ + HGFR+ A + L E+ + + +E Sbjct: 300 FPSDISKGKALAENTLNYAIKRLGFGEL--MVYHGFRSTASTFLYENKKNHKQDSEVIEL 357 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 + H RN V+A Y +++ LE+RR ++QWW+D++D Sbjct: 358 CLDHRERNKVKAVY-NRSLRLEDRRELMQWWSDYID 392 >UniRef50_C7JFF4 Phage integrase n=8 Tax=Acetobacter pasteurianus RepID=C7JFF4_ACEP3 Length = 434 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 110/384 (28%), Positives = 189/384 (49%), Gaps = 35/384 (9%) Query: 4 LVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKK 61 LV GS+ W +++ GK++ ++LG ++LADAR + + R + N +DP +++ Sbjct: 65 LVVTGGSRLWEFRFKSPVTGKRRQMSLGSAYSLSLADAREKAAKCRGMTENRLDPIIERE 124 Query: 62 NDKV--EQSKARTFKEVAIEWHGTNKKWSEDHAHRVL--KSLEDNLFAALGERNIAELKT 117 +K E K TF EVA ++ +DH + SL ++F GE+++ ++ T Sbjct: 125 KEKAARELEKGLTFAEVAAQYIKAQTPAWKDHRSPAVWTSSLTQHVFPIFGEKSVRDVDT 184 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYA-VQSGLIDYNPAQ------EMAGAVAS 170 +D+L ++ + + + E + R++ R I+ YA VQ NPA+ M A + Sbjct: 185 QDVLTALRPI-WTEKTETSGRIRGRIERILDYARVQQWREGENPARWRGHLSVMLPAPSK 243 Query: 171 CNR-QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 + QH A E K I E++ + S G + A+ L RS E+R A WSEID Sbjct: 244 ITKVQHHKAAEWKDISEIMKALQSING--MAAKAVRFCCLTAARSGEVRNAVWSEIDLSE 301 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA--HDLIFIGDH 287 ++W +P E+ K H VPLS A+ +L+++ A DL+F G Sbjct: 302 ALWVVPAEK------------MKAGREHRVPLSGDAVKVLQEVLPHRDAVSGDLLFPGAK 349 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 +P+S+ V+ AL +V V HG R+ E+ + SR+ E ++H ++ Sbjct: 350 RG-RPLSDVAVSKALHHAAGTKEVTV--HGLRSTFRDWAGETKVCSREVAEAALAHAGKS 406 Query: 348 SVRAAYIHKAEHLEERRLMLQWWA 371 V AAY +++ L+ RR +++ WA Sbjct: 407 KVEAAYF-RSDLLDLRRPLMEEWA 429 >UniRef50_C8PFJ4 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFJ4_9PROT Length = 383 Score = 129 bits (325), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 101/380 (26%), Positives = 174/380 (45%), Gaps = 42/380 (11%) Query: 5 VHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDK 64 + P+G+K++ +Y+ K K + +G E++LA+AR R+ E + + K +DK Sbjct: 35 IMPSGAKFFIYEYKQGAKYKRVTIGRAGEMSLAEARQRKSELKTRV---------KTSDK 85 Query: 65 VEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPI 124 + TF+EV EW T K S + + E L ALG IA++ +D++ + Sbjct: 86 I------TFREVFEEWIKTKSKISPKQLFWINRRFESLLLPALGSMQIADIGRKDIIGAL 139 Query: 125 KAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELK-- 182 + + E A ++ ++A+ +D+N ++ A RQ R K Sbjct: 140 SPLLSDEKQETAKKVLGALNGFYKFALLHEYVDHNIIADIDKATLIGRRQIRHFAYFKDE 199 Query: 183 -RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPI 241 I L+ + Y G + L +R RFA W EI + +W IP Sbjct: 200 AEIRNLIKAVKGYFGNERIKVCALFMLYTAVRGENARFATWDEI--KGDMWKIP------ 251 Query: 242 PGVKHSHRGSKMRT--THLVPLSTQALAILKQIKQFYGAH-DLIFIGDHDSHKPMSENTV 298 SKM+ H V LS+ +L + + IF + +P+S+NTV Sbjct: 252 --------ASKMKNGKDHEVFLSSSVRRMLSDYRASSPLQSEFIFPSIKSNVRPISDNTV 303 Query: 299 NSALRVMGYDTKVEVCGHGFR---TMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 S LR +G+ ++ + HGFR + C + + D +E ++H+ +N V+ AY H Sbjct: 304 RSMLRNLGFSNEM-ITPHGFRATFSTICHEKQDEHGQNSDVIELCLAHVEKNKVKDAYNH 362 Query: 356 KAEHLEERRLMLQWWADFLD 375 A++L++R ++QWW+DFLD Sbjct: 363 -AKNLKQRAALMQWWSDFLD 381 >UniRef50_Q8DF52 Phage integrase n=1 Tax=Vibrio vulnificus RepID=Q8DF52_VIBVU Length = 452 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 103/415 (24%), Positives = 192/415 (46%), Gaps = 73/415 (17%) Query: 11 KYWRLQYRYEGKQK--MLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVE-- 66 K W+ Y + +K L +G YP +TL DAR + + +LL +DP + ++ + Sbjct: 45 KSWQFNYHHPLTKKRIKLTIGNYPALTLKDARKKAENYLELLEKNIDPQEYERTGGINAI 104 Query: 67 QSKARTFKEVAIEW-----------------HGTNK--------KWSEDHAHRVLKS--- 98 R FK+VA +W NK K SE VL+ Sbjct: 105 DPDKRLFKDVAEKWFEEKILAEDKKKRQEKIDDANKRAKDEGREKASEQELEAVLRDIRY 164 Query: 99 -------LEDNLFAALGERNIAELKT---RDLLAP--IKAVEMSGRLEVAARLQQRTTAI 146 L++++ ALG I +++T ++ L P K + M ++++R + Sbjct: 165 SKDIRGRLDNHILPALGNIPITKMETYLAQEALQPSYAKGINMDKICQISSR-------V 217 Query: 147 MRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIEL 206 M YA + G + NP +++ + +Q +P+++ + + EL+ + +TR E+ Sbjct: 218 MGYAKKLGYMKSNPLSDLSEVFVNKRKQKQPSIKPEGLSELMKAMGERNITKVTRAGFEM 277 Query: 207 TLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQAL 266 + R+SE+ RW E+DFE ++ IP S+R ++ H +PL+ Sbjct: 278 QMHTLARASEIAKMRWDEVDFENNLIKIP-----------SYRMKRL-NEHFIPLTKYTR 325 Query: 267 AILKQIKQFYGAHDLIFIGDHDSHKP-MSENTVNSALRVMGYDTKVEVCGHGFRTMACSS 325 +L+ +K F + +F D S +P M++ ++N+ L+ G+ K E+ HGFR M + Sbjct: 326 GLLEYLKPFSSHLEYVFPADPRSSRPHMNQQSINANLKRAGF--KGELVSHGFRHMGSTF 383 Query: 326 LVESGLWS------RDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 L +S + D +E ++H + +R Y + AE++E RR +L++W D++ Sbjct: 384 LNDSKKYGANEKFDADVIEACLAHCDNDKIREIY-NSAEYIEMRREILEFWGDYI 437 >UniRef50_UPI00019779C7 integrase n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI00019779C7 Length = 379 Score = 128 bits (322), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 111/390 (28%), Positives = 179/390 (45%), Gaps = 37/390 (9%) Query: 15 LQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKAR--- 71 ++Y + K+K++ +G YP ++L R +KL+ DP + KK DK + K + Sbjct: 1 MRYSFGDKRKLITIGQYPSVSLEQTRENAIGYKKLILAEADPQENKKLDKAAKIKMKEGQ 60 Query: 72 ---------TFKEVAIEWHGT--NKKWSEDHAHRVLKSLEDN--LFAALGERNIAELKTR 118 FKE + + +++ E H E + + ++ +IA Sbjct: 61 LHLVVEAWLKFKEKQVTYSTLKRDRRMMEQHLLPNFSKYESDRKIVSSTHIEDIAHSDIT 120 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA---VASCNRQH 175 ++A I+ R+E+A RL +I ++A+ G + N ++ + + Sbjct: 121 HIIAKIQ----DYRVELARRLFAHCLSIWQFALGRGYTETNYLFKIDTKQLLLPKVTNHY 176 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 + + ELL ID Y + R A++ +I +R+ L +WS IDFE I TIP Sbjct: 177 EKITDEATLGELLRAIDGYIHSSIIRSALKFVSIIPLRAENLATLKWSYIDFEKKILTIP 236 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R + K S + PL TQA+ ILK+IK+ G IF G + HKPM Sbjct: 237 --RSEMKVKKKSFPDFSL------PLPTQAIEILKEIKKNTGWGVWIFHGHNKIHKPMVS 288 Query: 296 NTVNSALRVMGY-DTKV--EVCGHGFRTM---ACSSLVESGLWSRDAVERQMSHMARNSV 349 + N ALR MG+ D K + H FR C + + S + E + H N+V Sbjct: 289 ESANKALRSMGFADAKRGRKQTLHSFRGTFRSLCDTHQDKHNASFEIKEAVLDHRIGNNV 348 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 AY+HKA ++E+ R +LQWWAD+LD +E Sbjct: 349 TQAYLHKAYYVEQMRPLLQWWADYLDELKE 378 >UniRef50_Q4FSX1 Probable phage integrase n=1 Tax=Psychrobacter arcticus 273-4 RepID=Q4FSX1_PSYA2 Length = 444 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 113/383 (29%), Positives = 179/383 (46%), Gaps = 21/383 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L + N + +R ++ GK+K LG YP TL AR LLA G+DP Sbjct: 70 LNLYIRDNKTTTFRHRFTSPVTGKRKNFTLGAYPVFTLEQARDMYRNNLSLLAGGIDPVF 129 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNL-FAA--LGERNIAEL 115 ++ ++ TF E+A EW ++ S+ HR ++ ++ +AA +G I + Sbjct: 130 HHQDAHNKKRAMPTFSELADEWL-QSQIASKQFEHRTIEQKRTHIAYAAAYIGRMPIDHI 188 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV--ASCNR 173 KT D+L IK +E + A R++ I A+ G ID NPA +A + Sbjct: 189 KTPDVLRAIKDIE-KKTIPTAKRVRGVCQRIFALAIGQGYIDNNPAIAVADLMLPKPKTE 247 Query: 174 QHRPALELKRIPELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 H +E +LL+ IDS T + ++L L+F R+ ++ RW IDF+A W Sbjct: 248 HHHAIIEPIAFGKLLSDIDSVTDFYGHAQNILKLQALLFQRNGDMCSMRWDAIDFDAKTW 307 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 T P+ K +RG M + +VPL TQA+ L+ + +F K Sbjct: 308 TFSPQ-------KTGNRGD-MVASLVVPLPTQAIEHLRALHALTSKTPYVFYNSRRKEKF 359 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 + +N L +GY K HGFR A + +VE S E Q+ H R++ A Sbjct: 360 EHQQQLNKFLWRLGY--KDVHTPHGFRASARTLMVEQLGISETLAELQLGHNVRDANGRA 417 Query: 353 YIHKAEHLEERRLMLQWWADFLD 375 Y ++ +++RR M+Q WAD+LD Sbjct: 418 Y-NRVTMIDKRRDMMQRWADYLD 439 >UniRef50_A7MTK6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7MTK6_VIBHB Length = 290 Score = 128 bits (321), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 76/275 (27%), Positives = 129/275 (46%), Gaps = 15/275 (5%) Query: 97 KSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLI 156 + L +++ LG+ + E++ + ++ +E G+LE R IM +AV + I Sbjct: 13 QKLNLHIYPKLGDVPVKEIRASMWIDAMRPLERKGKLETVVRTTALFRRIMNFAVNNDYI 72 Query: 157 DYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSE 216 NP M R + +++K +P LLT + T RP + E L RS+E Sbjct: 73 HNNPIGSMRDVFKKPKRGNFSCIDIKELPTLLTMVVQSTMRPANKLLFEFQLHTLTRSNE 132 Query: 217 LRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY 276 ARW E FE +W +P ER +K R H +P++ + ++ILK K Sbjct: 133 ATGARWEEFSFEEKVWYLPAER------------AKNRLMHKIPMTPEVISILKAAKSLS 180 Query: 277 GAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDA 336 + +F KP+ T+N+A + +G K + HG R++ + L E + Sbjct: 181 SGSEYVFPSRTSLKKPVHSETINAAFKRLGLSGK--MTSHGTRSLGSTILYERTDFESVV 238 Query: 337 VERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWA 371 +E +SH R+ VR AY ++ + E+RR L+WW+ Sbjct: 239 IEAVLSHTDRDGVRDAY-NRNKFFEKRRAALEWWS 272 >UniRef50_D2MI75 Phage integrase family protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI75_9BACT Length = 398 Score = 127 bits (320), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 101/380 (26%), Positives = 182/380 (47%), Gaps = 24/380 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP-GDK 59 + L V P GSK W ++ +GK+ + LG +P ++L +AR R + R+ +A+G DP +K Sbjct: 24 LFLKVSPGGSKSWVQRFTIKGKRHDVGLGGWPVVSLQEARERAFDNRRAVAHGRDPLAEK 83 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTN-KKWSED-HAHRVLKSLEDNLFAALGERNIAELKT 117 +K K + TF+ VA +++ N +W H R L+ +E F G+ + + Sbjct: 84 QKASKA--AAVPTFRAVARKYYEENLPRWKAGRHTDRWLQVVEKYAFPVFGDVPVDRVGR 141 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQE-MAGAVASCN--RQ 174 D+L + + + + E A +L+ R I+ + G + N A E + GA+ S ++ Sbjct: 142 EDVLRMLTPI-WTAKPEYARKLRHRVRLILDWCQAHGYVHTNIAGEQIGGALPSMPSVKE 200 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H +L + + L I++ + + +L +R E R A W EI++E WTI Sbjct: 201 HHRSLPYAEVSQALDLIEASGASLSAKLCLRFLILTAVRPGEARNATWEEINWETKTWTI 260 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P + K + H VPLS +A+ +L++ + G LIF KP+S Sbjct: 261 PAGK------------MKAKAEHRVPLSREAMQVLERASRVRGESPLIFPSSLKRAKPLS 308 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 + T+ LR +G K HGFR+ + E +E ++H N++ AY Sbjct: 309 DMTLTKLLRDVGLREK--TVPHGFRSSFRTWAGEQTNSPTPVIELCLAHSVGNAIEKAYT 366 Query: 355 HKAEHLEERRLMLQWWADFL 374 +++ L++R+ ++Q W ++ Sbjct: 367 -RSDLLQKRQRLMQEWGRYV 385 >UniRef50_A6Q4N1 Site-specific recombinase, phage integrase family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q4N1_NITSB Length = 412 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 101/401 (25%), Positives = 190/401 (47%), Gaps = 47/401 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++L+ PNG K +RL Y Y GK+ +G YP+I+LA AR + E ++L+ NG+DP K Sbjct: 31 LYILIKPNGRKIFRLDYVYAGKRNTYTIGDYPQISLAQARKIKYEVKELIKNGIDPNRYK 90 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNKKWSEDHAH---RVLKSLEDNLFAALGERNIAEL 115 + K E + F IE +K A + + + + +GE I E+ Sbjct: 91 QEQKRIKELEANKKFTSFVIERFIQHKAKEVSKARLQKNYINTFANYITPFIGEVKIDEV 150 Query: 116 KTRDLLAPIKAV---------EMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG 166 +D++ +K +G+ A + + ++ +A+ + NPA + Sbjct: 151 TKQDIIKIVKNTYSTKLQKDNRSTGKTYKAREVYRLLKSLFDFAIHNDYTQTNPA--VGI 208 Query: 167 AVASCNRQHRP----ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARW 222 + S +H+P A+ +RI E+ KI S P R ++ L +R + +W Sbjct: 209 DIDSLIPKHKPTRHKAVTNERIKEIYQKICSLQN-PYFRLPLQYIALTAVRFGNVANLKW 267 Query: 223 SEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHL---VPLSTQALAILKQIKQFYGAH 279 DF+ + P E M+T + +PL+ + +++Q K + Sbjct: 268 DYKDFDKRVIIYPAE--------------AMKTKNQPFRIPLTDAIVKVIQQAKAIASPY 313 Query: 280 -DLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFR----TMACSSLVESGLWSR 334 +++F ++HKP+S+NT+ L++ + + ++ HGFR T+A E G S Sbjct: 314 SEIVFGSPINAHKPISDNTLRKVLKIDLNEPEQDL--HGFRSSFETIALEHQKEHGC-SF 370 Query: 335 DAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 +A+E Q+ H + V +Y+ +++ LE+R+ +L WWA++L+ Sbjct: 371 EAIEAQLHHNIGSKVTQSYL-RSDFLEDRKELLNWWANYLN 410 >UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0X2_ACICJ Length = 410 Score = 124 bits (312), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 107/389 (27%), Positives = 188/389 (48%), Gaps = 40/389 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V +GSK W +Y G++ ++LG +++L++AR + + R L+ +G DP ++ Sbjct: 29 LYLRVRADGSKSWAFRYTMAGRKHWMSLGPLRDVSLSEAREQARQLRNLVRDGFDPLAQR 88 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNK-KWSE-DHAHRVLKSLEDNLFAALGERNIAE-- 114 + + + ARTF VA + ++ +WS HA + +L +G+R ++E Sbjct: 89 RERQHLAAEQTARTFDAVAAAYVEAHRAEWSNPKHAQQWENTLATYASPIIGKRPVSEIS 148 Query: 115 -LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL-IDYNPA-------QEMA 165 L R +L PI A + E A+RL+ R A++ YA G NPA Q A Sbjct: 149 LLDVRRVLDPIWA----EKPETASRLRGRVEAVLAYATVHGWRSGDNPARWPGFLDQIYA 204 Query: 166 GAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI 225 +H AL+ +P + ++ ++ +E +L RS E R ARW EI Sbjct: 205 PKAKVRAVKHHAALDYHDMPAFMAELREREA--VSARCLEFAILTATRSGEARGARWDEI 262 Query: 226 DFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD-LIFI 284 DF+A++W IP R KM+ H VPL+ +A+ +L+++ D LIF Sbjct: 263 DFDAAVWVIPAPR------------MKMKKEHRVPLAPRAVELLREMAGRSPRRDGLIFP 310 Query: 285 GDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM 344 G KPM++ + A+ V+ + HG R+ E + R+ E ++H+ Sbjct: 311 GGAPG-KPMTDVALAKAVAVL----RPGFTAHGMRSSFRDWAAEMTSFPREIAEVALAHI 365 Query: 345 ARNSVRAAYIHKAEHLEERRLMLQWWADF 373 ++ AAY + + L +RR +++ WA++ Sbjct: 366 NKDRTEAAY-QRGDLLAKRRQLMEAWANY 393 >UniRef50_C8PUK8 Phage integrase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PUK8_9GAMM Length = 446 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 109/404 (26%), Positives = 191/404 (47%), Gaps = 43/404 (10%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L + PNG +R +Y Y GK+ + LG YP +LA A+ ++ LLA +DP Sbjct: 34 LELRIRPNGKAEFRHRYTHPYTGKRPYMTLGSYPAFSLAQAKQAYNDNMALLAQTIDPLT 93 Query: 59 KKKNDKVEQSKA--RTFKEVAIEWHGTNKKWSEDHAHRVLKSLED------NLFAALGER 110 K+ + +Q+ A TF+ VA +W N++ + R +++ + L A G+ Sbjct: 94 HKEQENAKQAYALDNTFEAVAKDW--LNEQTNNPDYVRAKQTIVNWEYQLKPLIATFGKM 151 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA- 169 I + T +L ++ ++ + ++ R++ I +AV +GLI++NP ++AGA A Sbjct: 152 PIGSITTPQVLRLLREIQKT-HIQKGNRVKAIAGRIFAHAVINGLIEHNPVLQLAGARAL 210 Query: 170 -SCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAI-ELTLLIFIRSSELRFARWSEID 226 HRPAL ELL +ID+ T L + I +L L F+R ++ +W++I Sbjct: 211 KPTRSDHRPALITPAEFAELLKEIDNITNAKLFQKEILQLLALTFVRIGDVCAMKWADIH 270 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI-- 284 EA +W P++ K+ H M +VPL+ Q +AIL+++ + G + +F Sbjct: 271 LEAKMWVFEPQKG-----KNRH---DMVDCLVVPLAPQTIAILERMHEITGGMEYVFYTG 322 Query: 285 ----GDHDSHKPMSENTVNSALRVMGYDTKVEVCG---------HGFRTMACSSLVESGL 331 G H + ++ + ++ G CG HGFR A + L+E Sbjct: 323 KRKKGQHADPQQINRILNDPSMNKAGMGK--NYCGKGYLNVHSPHGFRASAKTLLMERLG 380 Query: 332 WSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 ++ E Q S + V ++ E + ER M+ WA++LD Sbjct: 381 YNHLITEIQ-SGRSMPDVYGNTYNRMEAINERIKMMNDWANYLD 423 >UniRef50_B5WB94 Integrase n=1 Tax=Burkholderia sp. H160 RepID=B5WB94_9BURK Length = 295 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 97/279 (34%), Positives = 140/279 (50%), Gaps = 30/279 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG--D 58 M+L V +GSK W+ YR +GK LG +P +++ADAR R+ A KL+A+G+ P + Sbjct: 26 MYLRVSVSGSKVWKFDYRLDGKDCSYTLGRFPNVSIADARQLRNAAAKLVASGIHPKAYE 85 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNK-KWS---EDHAHRVL-KSLEDNLFAALGERNIA 113 K+ + + T V EW N+ KW+ A R L + ++ + + R+I Sbjct: 86 KQLQQQTVAHQKNTLWPVCEEWLEDNRGKWTAYYHAQATRFLARYVKGSPLGTMPVRDIK 145 Query: 114 ELKTRDLLAPI---KAVEMS-----GRLEVAARLQQRTTAIMRYAVQSGLIDYNP--AQE 163 DLL I KA+ + G +A R++Q AI R A+ SG +D NP A + Sbjct: 146 VSHVYDLLQSIAKRKALAVDERKKEGAPHIAIRVRQHLDAIFRRAIISGRVDANPVAALK 205 Query: 164 MAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWS 223 + AV +H AL+ + LL S TG T A+ L LL +RS+ELR ARW Sbjct: 206 ASDAVMLPPTRHNRALDAHEVRHLLATF-SVTGTQRTHLAMHLLLLTSLRSAELRGARWR 264 Query: 224 EIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLS 262 EID +++IW IP ER KM H+VPLS Sbjct: 265 EIDLQSAIWAIPEER------------MKMERPHVVPLS 291 >UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella RepID=A5I9N5_LEGPC Length = 407 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 105/375 (28%), Positives = 174/375 (46%), Gaps = 30/375 (8%) Query: 5 VHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDK 64 + PN K W +Y+ G LG YP ++L++A+ R E ++ GVDP K Sbjct: 31 ITPNNVKTWIYRYKINGVTTKFTLGHYPAMSLSNAKRRFLELSQMRREGVDP--KTVIQA 88 Query: 65 VEQSKARTFKEVAIEWHGTNKKWSEDHAHRVL---KSLEDNLFAALGERNIAELKTRDLL 121 E+ T ++A+ W+ TN + E H R L + +++++ LG++ + +++T+D+ Sbjct: 89 QEEQDNNTVDKLALNWY-TN--YIEKHVKRPLVIKRQIDNDIIPLLGKKKLDDVQTKDIS 145 Query: 122 APIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM-AGAVASCNRQHRPALE 180 + + G +A R + YAV G +NPA + + + + L Sbjct: 146 DALDTIVKRGARILANRTLSSIKQMFNYAVSRGYTQFNPASNIRSRDIGGIEKPKERVLT 205 Query: 181 LKRIPELLTKIDSYTGR--PLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L+ I L +DS + TR AI+L LL +R+ ELR A W EIDFEAS+WTIP Sbjct: 206 LEEIKALWLFLDSDLTQMSTQTRIAIKLLLLTGVRTVELRLASWHEIDFEASLWTIPALH 265 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 SK H V LS A ++ Q+K +H + D P++EN + Sbjct: 266 ------------SKASIIHKVHLSKLAKSLFLQLKPL--SHSDYVLTGVDGFHPITENAL 311 Query: 299 NSALRVMGYDTKV-EVCGHGFRTMACSSLVESGLWSRDAVERQMSH-MARNSVRAAYIHK 356 A++ + + + H R + L E+ +E+ + H M R + A Y ++ Sbjct: 312 PRAIKRIQEKLGIPDWTAHDLRRTFATQLGETLQIDPVVIEKCLGHKMPR--IMATY-NR 368 Query: 357 AEHLEERRLMLQWWA 371 E L +RR L+ WA Sbjct: 369 NEMLPQRREALERWA 383 >UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE42_ECOK1 Length = 418 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 112/406 (27%), Positives = 194/406 (47%), Gaps = 37/406 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE--ITLADARVRRDEARKLLANGVDPGD 58 +++ V +G+ +R YR G+++ L +G Y I+LA+AR A+KLL G P Sbjct: 25 LYVAVLTSGTVSFRYDYRINGRRETLVIGQYGRDGISLAEAREELIAAKKLLKAGQSPAA 84 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKS--LEDNLFAALGERNIAELK 116 K++ + A TF A+ K + R +K ++ ++ LG + +AE+ Sbjct: 85 AKRDGIKKIRGAETF---AVHTDSYMKHVILADSTRAMKQAVIDRDILPVLGNKMMAEIT 141 Query: 117 T---RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 T RDL I VE GR A + ++ +++ R+A G +NPA ++ + + + Sbjct: 142 TSMVRDLCDRI--VERGGR-ATAVQAREIISSVYRHANDRGHGLFNPAADIKPSSIAIFK 198 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 L + I +D+ + A++L L+ +R E A W EIDF+ WT Sbjct: 199 PRERTLTPEEIGLFFRTLDAIGAMGTMKMALKLVLITMVRKGEFTNATWDEIDFKKWTWT 258 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP +R +GS+ H++ L QA IL ++ G + + G ++ KP+ Sbjct: 259 IPSDR---------MKGSR---AHVIYLPKQAQDILVGLQMCAGGSEYLVPGRYNFRKPL 306 Query: 294 SENTVNS----ALRVMGYDTK--VEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 S +NS ++++ D + + H R A + L E+G + D +E+ ++H + Sbjct: 307 SNAALNSLIDRTVKIINEDGEHIQDFTVHDMRRTASTLLHEAG-YPSDWIEKALAH-EQK 364 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLD--VNRERF-ISPFEYAKI 390 VRA Y +KAE+ +R MLQ WAD +D +N E + PF +K Sbjct: 365 GVRAVY-NKAEYARQRAYMLQQWADMIDSWINGEHTDLIPFSPSKF 409 >UniRef50_C7JAN4 Phage integrase n=17 Tax=Acetobacteraceae RepID=C7JAN4_ACEP3 Length = 404 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 110/390 (28%), Positives = 184/390 (47%), Gaps = 35/390 (8%) Query: 4 LVHPNGSKYW--RLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKK 61 LV +K W R ++ + LG +++LA+ R + EAR L+A G+DP D+++ Sbjct: 30 LVAQGAAKSWFFRFTSPISNTRREMGLGSVHDLSLAEVRRKATEARHLVAAGLDPIDERR 89 Query: 62 NDKVEQSK--ARTFKEVAIEW-HGTNKKWSEDHAHRV-LKSLEDNLFAALGERNIAELKT 117 K ++ K TF ++A + W + V SLE ++F A+G + ++E++T Sbjct: 90 KLKAQRKKESGLTFSDIAKRYVKEMAPGWRNARSSTVWTSSLERHVFPAMGGKLVSEIET 149 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQ-------EMAGAVA 169 D+LA ++ + + E A R++ R I+ +A G D NPA+ + A Sbjct: 150 EDVLAVLRPIWKT-TTETADRVRGRIERILDFARTHGWRDGENPARWRGHLANILPKPSA 208 Query: 170 SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 +H PA+ K I +++ K+ G ++ A+ L RS E+R A WSEID Sbjct: 209 VAKARHLPAVNRKDIGKVMAKLAQAEG--ISPKAVRFACLTAARSGEVRQAVWSEIDLVT 266 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYG--AHDLIFIGDH 287 IWTIP H + K H VPLS A+A+L+++ F A DL+F G Sbjct: 267 KIWTIP---------AHKMKAGK---EHRVPLSAGAIAVLQEVLPFRDKRAGDLVFPGGK 314 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 +P+S+ ++ AL V V HG R+ E + + E ++H + Sbjct: 315 RG-RPLSDVVLSKALHSAAGTKDVTV--HGLRSTFRDWAAEETDYPGEVAEMALAHTISD 371 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 V AAY + + +RR M+ W D + ++ Sbjct: 372 KVEAAY-RRGDLFNKRREMMTAWNDKMSLS 400 >UniRef50_B5AXB8 Putative integrase n=1 Tax=Escherichia coli RepID=B5AXB8_ECOLX Length = 396 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 64/157 (40%), Positives = 99/157 (63%), Gaps = 2/157 (1%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V GSKYWR++YR + K+ LA GVYP I+L DAR +RD A+KLL G+DP Sbjct: 32 LYLEVSQTGSKYWRMKYRRPSDKKEDRLAFGVYPTISLQDAREKRDNAKKLLVKGIDPKA 91 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 +++ K E+ A TF+ + +W +++ W+EDH RVL+SLE +F +G +I +L+ Sbjct: 92 EQRAAKAEEKGAFTFETIGRQWVESHQMWNEDHRKRVLRSLEMYIFPHIGTSDIRKLEAM 151 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL 155 +L K V+ +G+ + A RL+QR I+ A SG+ Sbjct: 152 TILPLFKKVDDAGKHDTANRLKQRVKDIIHSARLSGI 188 >UniRef50_B0VTB2 Putative prophage integrase n=1 Tax=Acinetobacter baumannii SDF RepID=B0VTB2_ACIBS Length = 388 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 97/377 (25%), Positives = 173/377 (45%), Gaps = 31/377 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V PNG K W L YR GKQ LG YP + +AR+ +AR+L G Sbjct: 25 LNISVFPNGKKKWVLSYRQNGKQNQKMLGEYPVMGCKEARL---QARQLKLEY--QGKVA 79 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + V + + +W T+KK+ + +R+ ED F L I E++ + + Sbjct: 80 NSPPVHKVIEEWLSIMKSQW--TSKKYYDTVEYRLAYLTED--FKNLP---INEVERKHI 132 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 IK + G LE A+R + + +A+ S D NP + + P L Sbjct: 133 SKKIKEIVAKGTLETASRALRLGKQVFDFAIASDYTDRNPCTLVEDVIPEYESDSHPCLP 192 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARW--SEIDFEASIWTIPPER 238 +PE ++ + + + A+ L R +EL ARW E+DFE +W IP +R Sbjct: 193 ASEMPEFFRRMQASHSSSIVKMAMLLVCYTGTRITELLKARWDSGELDFENKVWIIPADR 252 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K R +VPL Q A+ K+++ IF ++ M+ +V Sbjct: 253 ------------MKRRKELMVPLVPQIYALFKELESVKIDDGYIFKKRGKPYEYMTSESV 300 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS---VRAAYIH 355 + ++ MGY+ K + HGFR++ + ES L+ + ++ Q++H+ +++ + + Sbjct: 301 LTMIKRMGYEDK--MVTHGFRSLFSTHANESKLFRGEVIDYQIAHVNKSTKADKTSKIYN 358 Query: 356 KAEHLEERRLMLQWWAD 372 +AE+ +ER ++ W+A+ Sbjct: 359 RAEYWDERVELMTWYAN 375 >UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QCE7_9RHIZ Length = 418 Score = 121 bits (304), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 106/399 (26%), Positives = 192/399 (48%), Gaps = 35/399 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+G++ W +Y ++ K + L LG ++LA AR +AR+ L G DP + K Sbjct: 28 LYLRVKPSGARSWVFRYMHDRKPRYLGLGSAASVSLATARSLAGDARRQLDLGQDPIEAK 87 Query: 61 ----KNDKVEQSKARTFKEVAIEWHGTNK-KW-SEDHAHRVLKSLEDNLFAALGERNIAE 114 + ++++A TFKE A + ++ W + H + +L L+ G +A Sbjct: 88 RAAERETAADKARAMTFKECAEAYMAAHEPSWKNAKHCEQWHSTLRRYLYPKFGGIAVAL 147 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQ---EMAGAVAS 170 + T + I+ + S E A+R++ R ++ +A G NPA+ +A + Sbjct: 148 VTTEMVFEAIQPIWHS-MPETASRVRGRIEVVIDWAKARGAFSGENPARWRGHLANLLPK 206 Query: 171 CNR----QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 ++ +H A+ +P L++++ + TG LT A+E T+L R++E A+WSE D Sbjct: 207 PSKVAKVEHHAAMPFDDLPALMSELRAATG--LTSRALEFTILTAARTTEALGAQWSEFD 264 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 E IWT+P R K H VPLST+A+ I+K+++ ++ +F G+ Sbjct: 265 LEKKIWTVPAVR------------MKAGKDHRVPLSTRAVEIIKELETV-KRNEFVFPGE 311 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 KP + S L ++ + E+ HGFR+ E+ + VE ++H Sbjct: 312 ----KPGRHLSNMSMLMLLRRLKRGELTVHGFRSTFRDWAAETTSFPNFIVEMALAHAIE 367 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPF 385 + V AY + + LE+RR ++ W + + R ++ F Sbjct: 368 SKVEGAY-RRGDLLEKRRALMVAWMQYCAKAKMRPVADF 405 >UniRef50_B7XGJ8 Integrase n=9 Tax=root RepID=B7XGJ8_PSEPU Length = 419 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 112/380 (29%), Positives = 174/380 (45%), Gaps = 37/380 (9%) Query: 11 KYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKA 70 K W +Y ++ LALG +P ++L DAR+ D+ R +A GVDP ++ KV+ +KA Sbjct: 34 KSWVFRYMLAKQRHDLALGTFPALSLRDARLEADKYRLDIARGVDPAAERA--KVKAAKA 91 Query: 71 ------RTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAP 123 TF+ A + T + WS+ H + SL +++ A+G IAE+ T D+L Sbjct: 92 SRTTTSHTFRASAERYIRTHSSSWSKKHHQQWQNSLTKHVYPAIGGFRIAEVDTDDILDV 151 Query: 124 IKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL-IDYNPAQEMAGAVASCNRQHR-----P 177 + + S A R++ R ++ A L NPA+ +Q P Sbjct: 152 LTPI-WSKIPVTANRVRNRIELVLDAAKALKLRQGENPARWRGHLDKLLPKQSHTVVPFP 210 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + R ELL ++DS G A+E +L R+ E+ A+W EID+E IW IP E Sbjct: 211 SPTPLRTAELLARLDSLDGSAAR--AVEFAILTATRNQEVSGAQWPEIDWEEKIWYIPAE 268 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K H VPL+ Q L +L+Q G HD + P+ N Sbjct: 269 R------------MKAGKAHRVPLTEQMLEVLRQQ---VGKHDKWIFLNSWRTGPIPGNA 313 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + L + D V HGFR+ + E R+ E ++H + V AAY ++ Sbjct: 314 MARVLDQLQVDG---VVPHGFRSTFRTWAAEETDHQREVCEMALAHTLNSKVEAAY-NRG 369 Query: 358 EHLEERRLMLQWWADFLDVN 377 + L++RR +++ W DFL N Sbjct: 370 DLLDKRRALMKDWGDFLVAN 389 >UniRef50_D0SVD2 Predicted protein n=2 Tax=Acinetobacter RepID=D0SVD2_ACILW Length = 388 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 106/382 (27%), Positives = 180/382 (47%), Gaps = 40/382 (10%) Query: 1 MHLLVHPNGSKYWRLQYRY-EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++ V NGSK W+ +Y+ GK +G YP I +ARV K + G Sbjct: 35 LYFFVKANGSKSWQFRYKKRNGKWGWKGVGAYPIIKAKEARVIASGYLKEIEAGT----- 89 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 +V++ K + E ++ KKWS + ++ S++ +++ G R++ +KT Sbjct: 90 --FLEVDKYKLSSLIESLLD--KKQKKWSPKNFSKMQLSIKKHIYPEFGNRDLRTIKT-- 143 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSG-----LIDY--NPAQEMAGAVASCN 172 ++ E RLE ++ + ++ +A ++ +Y NP +E+ G Sbjct: 144 ----MEWYEFFARLEYDLKIPVQMRKLLSFAREAYDWACIYCEYKENPVREVQGFFERHK 199 Query: 173 RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 + ++L +P+LL+ I SY+ R T +EL LL+F R EL+ A+W + DF IW Sbjct: 200 SGNFKFVDLIELPDLLSAIRSYSSRS-TAIGLELLLLLFPRPGELQQAKWEQFDFHRKIW 258 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 P E K + H VPL QA+ +LK++K+ +F +D Sbjct: 259 IKPAEM------------MKNKKEHRVPLPDQAIILLKRLKEIQTPSPYLFPLRNDPMMA 306 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 MS +T N AL +GY+ K HGFR +A ++L +E +SH+ + + Sbjct: 307 MSVDTFNEALISLGYENKQH--PHGFRHLASTTLNNKFSDKYQIIESALSHV-KQGTKGI 363 Query: 353 YIHKAEHLEERRLMLQWWADFL 374 Y KAEH +ER ++Q WAD++ Sbjct: 364 Y-DKAEHFQERVDLMQGWADYV 384 >UniRef50_A3JW30 Site-specfic recombinase, phage integrase family protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JW30_9RHOB Length = 389 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 102/388 (26%), Positives = 179/388 (46%), Gaps = 34/388 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V +G YW + G ++ + LG P TLA+AR E +++ G DP +K Sbjct: 26 LQLYVKKSGRSYWVQRLTVNGIRRDIGLGSPPITTLAEAREVAFENKRIARAGGDPLAQK 85 Query: 61 KNDKV----EQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 + V EQ+ + E+ W G + A + ++E +F +G ++ ++ Sbjct: 86 RQKAVIPSFEQAARQVVVELGPTWRGAKE------AASFISTMECYVFPRIGGSRVSNVQ 139 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 + D+ I V + VAARLQ R +A+ ++++ NPA A A+ + + Sbjct: 140 SSDVRNIIMDVRKTAP-TVAARLQTRISAVFKFSIAKNWRTDNPATSSALALPKPTHKPK 198 Query: 177 PALELK--RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 P + L ++ + +++ T+ AIE T+L RS E+R A W EID +W Sbjct: 199 PRVSLPYLQVSGCIHAVNNSHAWVGTKLAIEFTILTASRSGEVRKAEWCEID--GDLWNR 256 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E K H VPLS +ALAIL++ ++ LIF +S Sbjct: 257 PSEH------------MKEEIAHSVPLSERALAILEKAQEINNESGLIFPAPRGGM--LS 302 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 + T++ ++ +G+ V HGFRT + E ++ + E ++H AY Sbjct: 303 DMTMSKLIKELGFAADV----HGFRTSFRTWSQEQTNFAWEVGEVALAHSVGGKSERAY- 357 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFI 382 ++++LE+RRLM+ W+ +L + R + Sbjct: 358 ARSDYLEKRRLMMAAWSSYLTLPRGEVV 385 >UniRef50_B7UT12 Predicted P4-family integrase n=26 Tax=Enterobacteriaceae RepID=B7UT12_ECO27 Length = 411 Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 99/367 (26%), Positives = 171/367 (46%), Gaps = 38/367 (10%) Query: 26 LALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQS----KARTFKEVA---I 78 + LG YPE++LA+AR + E RK + NG++P +K K Q K +TF E + Sbjct: 67 MGLGPYPEVSLAEARDKARELRKQIRNGINPLQEKHEQKARQEILARKKKTFAECCEEVL 126 Query: 79 EWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAAR 138 E + K ++ H + +LE + +G++ ++E+ DLLA ++ + ++ + E A+R Sbjct: 127 EVKDSEMK-NKKHLAQWRSTLETYAYPFIGKKAVSEITKVDLLAILEPIWLT-KNETASR 184 Query: 139 LQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ--------HRPALELKRIPELLTK 190 L+ R ++ YA + + G + Q H AL +I + + Sbjct: 185 LRGRIETVIDYAKAKEYFEGDNPAAWKGMLKPLLPQPSKVQITKHHAALPYNQIGSFMKE 244 Query: 191 IDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRG 250 + +G ++ A+E +L RS E+R A WSEID E WTIP R Sbjct: 245 LRERSG--VSPRALEFAILTAARSGEIRGAEWSEIDLEGKTWTIPASR------------ 290 Query: 251 SKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTK 310 K H VPLS A+A+LK + +F G + F+ +S+ + + L+ MGY Sbjct: 291 MKAAKEHRVPLSDAAVALLKALPRFKG---ISFVFPATRKGQLSDTALLAVLKRMGY--- 344 Query: 311 VEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWW 370 ++ HGFR+ E+ + R+ +E ++H + AAY + +R ++ W Sbjct: 345 TDLTQHGFRSTFRDWAGETTNYPREVIEHALAHQLADKAEAAY-QRGTLWPKRVALMDEW 403 Query: 371 ADFLDVN 377 + F N Sbjct: 404 SGFCLAN 410 >UniRef50_C2LK76 Putative uncharacterized protein n=1 Tax=Proteus mirabilis ATCC 29906 RepID=C2LK76_PROMI Length = 142 Score = 120 bits (302), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 56/86 (65%), Positives = 71/86 (82%), Gaps = 1/86 (1%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLVHPNGSKYWR +YR+ GK+KMLA GVYP+I+LA+AR +RDEARKL+A+GVDP +K+ Sbjct: 52 LFLLVHPNGSKYWRFRYRFGGKEKMLAFGVYPDISLANAREKRDEARKLVASGVDPSEKR 111 Query: 61 KNDKVEQSKA-RTFKEVAIEWHGTNK 85 K K EQ K TF++VA +WH TNK Sbjct: 112 KEVKEEQQKEFNTFEKVARDWHATNK 137 >UniRef50_C6RKK3 Phage integrase n=3 Tax=Acinetobacter RepID=C6RKK3_ACIRA Length = 426 Score = 120 bits (301), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 100/378 (26%), Positives = 180/378 (47%), Gaps = 44/378 (11%) Query: 26 LALGVYPEITLADARVRRDEARKLLANGVDPGDKKKND----KVEQSKARTFKEVA--IE 79 + +G YPE++LA+AR + E R + +G+DP K+ V++ + +TF E A + Sbjct: 64 IGIGPYPEVSLAEARAKATELRLQIRSGIDPIAHKQEQLEKLYVQKLRDKTFMECAKVVI 123 Query: 80 WHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARL 139 + T + +E H + +LE ++ LG+ +I + D+ ++ + + + E A R+ Sbjct: 124 ANKTRELKNEKHIGQWTSTLETYIYPTLGDISIGTITKVDIAEVLRPIWIK-KNETAKRI 182 Query: 140 QQRTTAIMRYAVQSGLIDY-NPAQ------EMAGAVASCNRQHRPALELKRIPELLTKID 192 + R I YA G + NPA+ + G + +R H P+L +++ + + Sbjct: 183 RGRIETIFDYAKAMGYFEGDNPAEWKGNLEPIFGNIKQESRPH-PSLPYEQVAGFIQHLR 241 Query: 193 SYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSK 252 G ++ A+E +L RS E+ A+W EIDF+ +W IP ER K Sbjct: 242 QKKG--ISPKALEFAILTACRSGEIFGAKWQEIDFKNKVWIIPKER------------MK 287 Query: 253 MRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVM------- 305 H VPLS +A+ +LK I+++ D IF + +S+ ++ ++ M Sbjct: 288 ANKEHRVPLSQEAVNLLKSIQEYTQPQDFIFPAPRNGAM-LSDMSLTILIKRMHEQKLKE 346 Query: 306 ---GY-DTKVE--VCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 GY D K + HGFR+ + + R+ E ++H + V AAY+ A + Sbjct: 347 NGLGYIDPKQNRVITTHGFRSTFRDWSADKTDYPREVCEHVLAHKLPDEVEAAYLRGA-Y 405 Query: 360 LEERRLMLQWWADFLDVN 377 LE+R+ ++ WA+F N Sbjct: 406 LEKRKGLMADWAEFCSAN 423 >UniRef50_UPI0001BCF8EC putative bacteriophage integrase n=1 Tax=Mannheimia haemolytica serotype A2 str. BOVINE RepID=UPI0001BCF8EC Length = 399 Score = 120 bits (300), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 94/379 (24%), Positives = 176/379 (46%), Gaps = 32/379 (8%) Query: 9 GSKYWRLQY---RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKV 65 GS W ++ + +++ + LG YP + AR E L+ G+ P + + K Sbjct: 36 GSFSWLYKFTNPHNKAQRQKIILGRYPRTPIDFARKIAMEYNALVKQGIHPTEHQAQQKQ 95 Query: 66 EQS-KARTFKEVAI---EWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLL 121 ++ +A TFKE+ E+ + K +D RV E +F G+ + ++ + Sbjct: 96 QKEIEAMTFKEMTSLYREFRADSVKNVDDAISRV----EMYIFPKFGDLPLNKISLAEWH 151 Query: 122 APIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALEL 181 +K +E +G+ ++ + I+ YA G ID+NP + + +H P +E Sbjct: 152 RTLKPME-AGKNNTLLKICSTSKQILDYAQTCGYIDFNPLTTLRASFRKKKAKHNPTIEP 210 Query: 182 KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPI 241 KR+ E + + T+ +IE LL R +E A+W+EIDF+ +W +P + Sbjct: 211 KRLAEFIRDLFLSDVERSTKLSIEFQLLTATRPNETAKAKWAEIDFKNRLWKLPAD---- 266 Query: 242 PGVKHSHRGSKMRT--THLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 KM+T H++ L++QALA+L+ I++F G + IF S T N Sbjct: 267 ----------KMKTGKPHIITLNSQALALLENIRRFTGDREYIFSSSRSKTGHQSTQTAN 316 Query: 300 SALR-VMGYDTKVEVCGHGFRTMACSSL--VESGLWSRDAVERQMSHMARNSVRAAYIHK 356 +A++ + G + HG R++ + L + + ++ ++H+ N Y H Sbjct: 317 NAIKSIQGGKYHSVLTSHGLRSVFSTYLNGLHDPMIHNVHIDACLAHVVGNGTSRTYNHS 376 Query: 357 AEHLEERRLMLQWWADFLD 375 A H E++R ++Q W D+++ Sbjct: 377 A-HEEQKRYIMQKWGDYVE 394 >UniRef50_C7I2C4 Putative integrase n=1 Tax=Thiomonas intermedia K12 RepID=C7I2C4_THIIN Length = 229 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 64/172 (37%), Positives = 103/172 (59%), Gaps = 3/172 (1%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + P G K WRL+Y + GK+K L+ G YP+++L AR +RD+AR++LA+G+DP + + Sbjct: 26 LYLEITPPGGKLWRLKYSFGGKEKRLSFGAYPDVSLKAAREKRDDARRMLADGIDPSEAR 85 Query: 61 KNDKVE--QSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K Q +F+ +A+EW + SE H RV++ LE +F LG++ IA + Sbjct: 86 KAAKARALQMAEDSFEAIAMEWAKRHLAARSESHRTRVIRRLEREVFPFLGKKPIASITA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA 169 D+LA ++ +E G L+ A R QQ ++RYAV +G + P + G A Sbjct: 146 PDILAVLRKIETRGVLDTAHRTQQTIGTVIRYAVATGRAEDRPDRRHTGRAA 197 >UniRef50_B0U0U5 Phage integrase n=1 Tax=Francisella philomiragia subsp. philomiragia ATCC 25017 RepID=B0U0U5_FRAP2 Length = 398 Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 33/388 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V NG+K W+L++ K+K LG YP L +AR E R+ + NG D K Sbjct: 25 LYLRVDKNGNKTWQLRHTINEKRKWFGLGSYPSTNLNEARKLSAELRERIDNGEDILAKP 84 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 KV K + IE+ N SED ++ ++++ +G R+I +K +D Sbjct: 85 DAKKVIYVKDLVAQ--YIEFQKKNSS-SEDFIKKLTNISKNHIIPKIGNRDIQTIKRKDC 141 Query: 121 LAPIKAVEMSG--RLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 + ++ + G R +V + L+ I R A + LI+ +P ++A A+ Q P Sbjct: 142 IDVLEPLIDKGATRNKVLSALK----GISRLARHNELIENDPTHDIARALPQYKAQPMPH 197 Query: 179 L----ELKRIPELLTKIDSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 + + ELL +D+YT G ++R+A++L I +R EL +W D E S Sbjct: 198 ISPLHNKSLLKELLLDLDNYTKGNYISRYALKLLPYIVLRPIELVSLQWDFYDAENSRII 257 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH-DSHKP 292 IP E KMR H+V LS QA I++++K G F + D+H Sbjct: 258 IPAE------------IMKMRKDHIVCLSRQAKQIIEELKDLQGGFKYFFPSYYKDNHDH 305 Query: 293 MSENTVNSALRVMGYD--TKVEVCGHGFR---TMACSSLVESGLWSRDAVERQMSHMARN 347 ++ ++ A+R MGY+ K + HGFR + A L E +S A+E ++H +N Sbjct: 306 INYESLAKAIRSMGYNGIDKPKQTLHGFRHIYSTAIHELQEQYHFSELAIELVLAHTDKN 365 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLD 375 RA+Y + A+ L ER ++Q +AD++D Sbjct: 366 KSRASY-NFADKLSERAKIMQVYADWID 392 >UniRef50_A5WEP7 Phage integrase family protein n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WEP7_PSYWF Length = 421 Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 103/400 (25%), Positives = 180/400 (45%), Gaps = 35/400 (8%) Query: 5 VHPNGSKYWRLQYRYE---GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG---D 58 ++PNG K + L+Y + K+ + LG +I+L +A+ + + ++ NG DP Sbjct: 33 IYPNGKKEYYLRYPHPHQPNKRPRMTLGSVEDISLHEAKTKAESILDMVRNGTDPKAIRQ 92 Query: 59 KKKNDKVEQSKARTFKEVAIEWHG----------TNKKWSEDHAHRVLKSLEDNLFAALG 108 +K+ +K TF E+A W T K+ + + + A +G Sbjct: 93 QKQVNKYAHLTNATFAEIAAAWRDNKINSRRQRKTGKRTFSESTLKFWDLCLGYMCAEIG 152 Query: 109 ERNIAELKTRDLLAPIKAVEMSGRLE--VAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG 166 + ++ + +L ++++ + V A + T + +AV GL D N A G Sbjct: 153 NLRMNDITSETILNVCESIQNNDNEAAFVGASTRLYTEKVFSFAVARGLCDTNVAIYTRG 212 Query: 167 AVASCNR-QHRPAL-ELKRIPELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRFARWS 223 +A +H PAL + LL + ++T LT A+ L +F+RS +LR RW Sbjct: 213 ELAPAGSGKHLPALTKPDEFAALLKDMATFTAASELTLMAMNLLPYVFVRSIDLRSMRWD 272 Query: 224 EIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF 283 EID+ +W P + M ++ +VPL+ Q + L+ I++ G +F Sbjct: 273 EIDWTHKLWVFSPTK--------GEGREDMVSSLVVPLADQVITRLRDIQKITGDKPYVF 324 Query: 284 IGDHDSHKP-MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESG--LWSRDAVERQ 340 S MS+ T+ A +GY K + C HGFR A + L+E +S E Q Sbjct: 325 ASIRSSSNAYMSKATLVQAFHRLGY--KGKHCTHGFRAAAKTLLMEQPELRYSDIVTELQ 382 Query: 341 MSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 + H +++ AY ++ + + R M+Q WAD++D R R Sbjct: 383 LGHRIKDTHGGAY-NRLDEISTRTQMMQHWADYIDSLRSR 421 >UniRef50_Q3J2T0 Putative P4-family integrase n=5 Tax=Rhodobacteraceae RepID=Q3J2T0_RHOS4 Length = 439 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 114/407 (28%), Positives = 193/407 (47%), Gaps = 53/407 (13%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 L + P G+K W L+ G ++ + LG YPE+ LA+AR R EA++ +A GVDP +++K Sbjct: 37 LQITPTGAKSWLLRTTVAGTRRAMGLGSYPEVGLAEARERAREAKRKIAAGVDPIEERKA 96 Query: 63 DKVEQSKAR----TFKEVAIEWHGTNKKWSEDHAHRVLK-SLEDNLFAALGERNIAELKT 117 + + A+ TF + A +W + + + ++ +L F +G + EL Sbjct: 97 TRAALAAAQRRSLTFADAADKWIKAKLSDRPEKSQKAVRATLTAYSFPEIGALTVQELTP 156 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL-IDYNPA------QEMAGA--- 167 +D++ + + + + + A +++ AI+ +A SG NPA +E+ A Sbjct: 157 QDVVRALNTI-WTAKPDTATKMRGYLEAILSWATVSGYRTGDNPARWAGNLKELLPAPSV 215 Query: 168 VASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDF 227 VA + PA+ + R+ + ++ G T A+ L RS E+R A WSE+D Sbjct: 216 VAKGRAGNFPAVPVARLADWWEELGQREGMGAT--ALRFAALTAARSGEVRGALWSEVDL 273 Query: 228 EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH 287 +A++W +P R KM H VPLS A+A+L+ + + G DLIF G Sbjct: 274 DAALWVVPGAR------------MKMGREHRVPLSGPAVALLRGLPRLAGTGDLIFPGPR 321 Query: 288 DSHKPMSENTVNSALRVMGYDTKVE-------VCGHGFR-TMACSSLVESGL-------- 331 +S+ +V++ +R M D + E V G+R T V GL Sbjct: 322 GGI--LSDMSVSAVMRRMQEDAETEAKMAGRPVSAAGWRDTRTGRPAVPHGLRSSFRDWA 379 Query: 332 ----WSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 + RD E ++H+ + V AY +++ LE RR M++ WAD L Sbjct: 380 AEVGYDRDMAEIALAHLVGSEVERAY-RRSDMLERRRAMMERWADVL 425 >UniRef50_A2SG96 Integrase or site-specific recombinase n=19 Tax=Proteobacteria RepID=A2SG96_METPP Length = 466 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 111/408 (27%), Positives = 176/408 (43%), Gaps = 47/408 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE------------------ITLADARVR 42 ++ V P+G+ R YR +++ L LG Y ++LA+AR+ Sbjct: 44 LYAYVAPSGTVSLRYDYRIGRRRETLTLGRYDATAPARVPRSLDVLEYGMGLSLAEARLL 103 Query: 43 RDEARKLLANGVDPGDKKKNDKVEQSKARTFKEVA---IEWHGTNKKWSEDHAHRVL--- 96 +A++ L GV P K K +S A TF + A E+ G K E A L Sbjct: 104 LTKAKRALEQGVSPSRAKAEQKAAESDALTFGKWAERYFEFKGDPKSKGEQLADSTLAMR 163 Query: 97 -KSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL 155 + + L LG+ + E+ L A ++ VA ++ + R+ + G+ Sbjct: 164 RSTYKRALEKPLGKLMLEEITPNRLAALCDDIKAQRGPAVAVHAREIVLMVYRHVQRKGI 223 Query: 156 IDYNPAQEM-AGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRS 214 NPA+ + A A+A + R AL + L +D P R A+ LL +R Sbjct: 224 EVPNPAERVQASAIARFEPRDR-ALSPSELRLFLAALDQCATMPTLRLAVRFVLLTGVRK 282 Query: 215 SELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQ 274 E A W EI F+ WTIP R +G + H+V LS QA+ IL ++ Sbjct: 283 GEFIGATWDEIVFDTETWTIPSRR---------MKGGR---AHVVYLSDQAMDILTTLRS 330 Query: 275 FYGAHDLIFIGDHDSHKPMSENTVNS--ALRVMGYDTKV----EVCGHGFRTMACSSLVE 328 + A + G +DS P+S+ T+N A+ + G H R +SL Sbjct: 331 CFSASRYLHPGRYDSDLPISDATLNRVIAMAIRGIQATAPEFQPFTVHDLRRTFSTSLNR 390 Query: 329 SGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDV 376 + R +E ++H+ RN + A Y + A + ERR+M+Q WAD LD+ Sbjct: 391 AKFDER-WIEMALAHVPRNRIAATY-NVARYAAERRIMMQAWADMLDL 436 >UniRef50_A0Q3W3 Phage integrase n=8 Tax=Francisella RepID=A0Q3W3_FRATN Length = 413 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 111/392 (28%), Positives = 181/392 (46%), Gaps = 38/392 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V GSK W Q+RY+GK L +G YP I+L AR + ++LA G DP +K Sbjct: 28 LYIKVSKAGSKSW--QFRYKGK--WLGIGSYPAISLKQARDEAFKYNQMLAGGKDPKLEK 83 Query: 61 KNDKVEQSKARTFKEV-AIEWHGTNKKW---SEDHAHRVLKSLEDNLFAALGERNIAELK 116 + K + + + A E +K + SE+ +R L + +L NI + Sbjct: 84 EKGKYQDNNLFSIVSAKAFETKDPSKPYGWKSEEVYNRNLSIYNRFILPSLKTFNIND-- 141 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRT-----TAIMRYAVQSGLIDYNPAQEMAGAVASC 171 I+ +++G LE QR I YAV G++ YN A+++ Sbjct: 142 -------IEPYQLAGILETTTPSNQRKIKNLLNMIFTYAVGKGILKYNIARDIQAEKEDP 194 Query: 172 NRQH--RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 P + +LL I +Y G+ T+ A++L +L+ R + + +W +I EA Sbjct: 195 KGFEFINPVEDKYNFSQLLNDIYNYKGQYNTKMALKLAVLVGFRPNNIVSMKWEDIQ-EA 253 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 +I + + IP V S KM PLS QA +L +IK++ G + +F Sbjct: 254 NI-----DGKKIPFVFISADNMKMSRDFRQPLSKQAYKLLMEIKEYNGGFEYVF-HSLSK 307 Query: 290 HKPMSENTVNSALR-VMGYD--TKVEVCGHGFRTMA---CSSLVESGLWSRDAVERQMSH 343 K ++ +++ ALR +GY+ K + HGFR SS+ W D++ +SH Sbjct: 308 KKHITIESLSKALRDTLGYNGTDKPKQHTHGFRKSVRTYISSIRSKYNWCSDSIRMILSH 367 Query: 344 MARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 N++ Y K + L ER MLQ WAD++D Sbjct: 368 SKENAIDNIY-DKNDFLLERSQMLQLWADYVD 398 >UniRef50_D1UFB2 Integrase family protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UFB2_9BURK Length = 431 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 100/374 (26%), Positives = 173/374 (46%), Gaps = 22/374 (5%) Query: 5 VHPNGSKYWRLQYRYEGKQKMLA-LGVYPEITLADARVRRDEARKLLANGVDPGDKKKND 63 V G+K WR +Y GK++ LA +G Y I+L AR + + +L+A G+ P + D Sbjct: 63 VMTTGTKVWRFRYSLNGKRQPLATIGDYRMISLRVARAKAQKYAELVAQGISPVATARRD 122 Query: 64 KVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLK-SLEDNLFAALGERNIAELKTRDLLA 122 + ++KA +E A + T D R + +L+ ++ A+G + + + ++A Sbjct: 123 RGAEAKADVLREAAELYMATEMAGKSDEYRRTTRRALDKDVLPAIGGLPVKSVTAQHVVA 182 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM-AGAVASCNRQHRPALEL 181 +++ G ++A + + Y + L NPAQ + A ++A+ + R L Sbjct: 183 ICDSIKSRGSPKMALHTRNVIKRLYEYLIARQLATANPAQVVPARSIATFESRTR-VLSG 241 Query: 182 KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPI 241 I L ID+ + R + A+ L +L +R S+L + W E D E + W IP R Sbjct: 242 DEIGATLHAIDTSSIRRPLKIALHLLVLTMVRKSDLVESTWEEFDLEKASWRIPAAR--- 298 Query: 242 PGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSA 301 K LV L QA+ +L+++ + A +F +P++++T+N A Sbjct: 299 ---------LKQDADQLVYLPQQAVTLLRELHRARAATRFVFPSVRGDDRPIAKSTLNQA 349 Query: 302 LRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLE 361 ++ +G D + V H FR A L E +R A E + S R R ++ A Sbjct: 350 VKALGLDVEHFVL-HDFRRTASVHLRE---MARHAQEDKSSAQTRQHAR--HVEAASAAA 403 Query: 362 ERRLMLQWWADFLD 375 E R + Q WADF+D Sbjct: 404 EARQIAQRWADFVD 417 >UniRef50_Q92LG2 Phage-related integrase n=1 Tax=Sinorhizobium meliloti RepID=Q92LG2_RHIME Length = 409 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 114/401 (28%), Positives = 182/401 (45%), Gaps = 50/401 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE----ITLADARVRRDEARKLL-ANGV- 54 ++L V NGSK + ++ + KQ+ +G Y +LA+AR RRDE ++ A G+ Sbjct: 26 LYLRVRENGSKSFIVKATIDKKQREWTIGSYGSEEHHFSLAEARKRRDEIMAVIRAGGIS 85 Query: 55 DPGDKKKNDKVEQSK----ARTFKEVAIEWHGTNKKWSEDHAHRV-LKSLEDNLFAALGE 109 +P K VE A F +IE + + HR +S + ++ E Sbjct: 86 EPTGKSVTQSVEPESTTFPAPLFGPFSIELIQQIEGGFRNAKHRAQWRSTLETYCKSIWE 145 Query: 110 RNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL-IDYNPA------Q 162 + + + T D+LA ++ + S + E A+R++ R ++ A G NPA Q Sbjct: 146 KRVDRITTDDVLAILRPI-WSTKAETASRVRGRIERVLNAAKVRGFRSGENPAAWQGHLQ 204 Query: 163 EMAGAVASCNRQHRPALELKRIPEL---LTKIDSYTGRPLTRWAIELTLLIFIRSSELRF 219 + R H PAL + +P L LT ID+ + A++ +L RS ELR Sbjct: 205 LLLPKRQKLQRGHHPALPFQDLPTLWQKLTSIDT-----IASAALQFLILTAARSGELRG 259 Query: 220 ARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAH 279 A+W E D E +WTIP R K HLVPLS + ILK++++ + Sbjct: 260 AKWEEFDLEKRLWTIPASR------------MKAAREHLVPLSDSCIEILKRMQKIRHS- 306 Query: 280 DLIFIGDHDSHKPMSENTVNSALRVM--GYDTKVEVCGHGFRTMACSSLVESGLWSRDAV 337 D +F G + H P+S+ T++ L + GY HGFR+ E +SR+ Sbjct: 307 DFVFPGTRE-HAPLSDMTLSKVLHGLCKGYTV------HGFRSTFRDWCGEKTDFSREHA 359 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNR 378 E ++H ++V AY + LE RR ++ W F+ R Sbjct: 360 EACLAHTIGSAVERAY-RRGNSLEPRRRIMTAWEAFILTGR 399 >UniRef50_A6VNS1 Phage integrase family protein n=7 Tax=Pasteurellaceae RepID=A6VNS1_ACTSZ Length = 427 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 117/401 (29%), Positives = 189/401 (47%), Gaps = 41/401 (10%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG- 57 + L + PNG+K W Y Y K+ +G YP ++LADAR + E R+LLA +DP Sbjct: 31 LRLAIKPNGTKTWLFNYTKPYIKKRTDKTIGQYPSVSLADARAKAHEFRELLAKNIDPHQ 90 Query: 58 ---DKKKNDKVEQSKARTFKEVAIEWH------GTNKK-WSEDHAHRVLKSLEDNLFAAL 107 +K+K +++ S TF VA EW G +K +SE ++ + D + L Sbjct: 91 NEIEKEKQERLPMSN--TFSHVANEWLVYREKIGMERKDYSEKTKTDTIRRVNDAI-EIL 147 Query: 108 GERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA 167 G+ + ELK + LA + A G+ + +I YA + G D N + + Sbjct: 148 GDTSFKELKLQHGLALLDAHRTRGQYTEMKKRLFVLKSIAEYAERFGYWDRNEWRYLGED 207 Query: 168 VASCNR-QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 + S ++ +H A+ K +PE L ++ + AI LL R+SE A++S+I Sbjct: 208 LPSPDKNKHFAAIHYKELPEFLFELRKANIHYSSLLAILWGLLNVTRASETVGAKFSDIS 267 Query: 227 FEASIWTIPPEREPIPG----VKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLI 282 E E +PG ++G K HL+PLS QA +L I++ D + Sbjct: 268 ----------ENENLPGELVLTVQVNKGGKGARDHLIPLSRQAGKLLTFIRK-NSTSDYL 316 Query: 283 FIGDHDSHKPMSEN--TVNSALRVMGYDT-KVEVCGHGFRTMACSSL----VESGLWSRD 335 F + + + N T N ++ MG K + HG RT+ S +E GL + Sbjct: 317 FPAAYKRGRLVHINPQTPNDVIKSMGAGKYKGIMTNHGMRTLFSSYCNDNRLELGL-DPE 375 Query: 336 AVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDV 376 +E +SH+ + VR AY ++AE+L R LQ WAD++++ Sbjct: 376 IIEICLSHLNGDKVRNAY-NRAEYLPYRLKTLQAWADYVEL 415 >UniRef50_Q7VJH4 Integrase n=1 Tax=Helicobacter hepaticus RepID=Q7VJH4_HELHP Length = 281 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 88/286 (30%), Positives = 140/286 (48%), Gaps = 31/286 (10%) Query: 112 IAELKTRDLL-APIKAVEMSGRLEV---AARLQQRTTAIMRYAVQSGLIDYNPAQEM--- 164 ++ L RD+ + I + M +L + A RL I ++A+ GL ++N + Sbjct: 8 VSSLHIRDIHHSQISKIIMQLQLRIPEGAKRLLAHCYNIWQFALSRGLAEFNIIANIDKK 67 Query: 165 AGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE 224 + +R + + + EL+ IDSY + + A++ +I +R+S L +W Sbjct: 68 TILLPKSDRHYAKITDRVVLGELMRAIDSYPNSIIIKCALQFVAIIPLRASNLALLKWEY 127 Query: 225 IDFEASIWTIPPEREPIPGVKHSHRGS-KMRTTHL----VPLSTQALAILKQIKQFYGAH 279 IDFE+ TIP RG+ K+++ HL +PL QA+ IL++IKQF G Sbjct: 128 IDFESKTLTIP-------------RGNMKVKSNHLTDFTLPLPRQAIEILQEIKQFTGWG 174 Query: 280 DLIFIGDHDSHKPMSENTVNSALRVMGY-DTKV--EVCGHGFRTM---ACSSLVESGLWS 333 L+F H P+ ++N ALR MG+ D K + H FR C++ S Sbjct: 175 KLVFHASTKIHSPLVMESLNKALRSMGFADEKRGRKQTIHSFRGTFRSLCNTYQSEHNAS 234 Query: 334 RDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 + E + H N V AY++K E++E+ R +LQWWADFLD RE Sbjct: 235 FEIKEAVLDHKVGNRVTEAYLYKVEYVEQIRPLLQWWADFLDRVRE 280 >UniRef50_B1FYI2 Integrase family protein n=3 Tax=Burkholderia RepID=B1FYI2_9BURK Length = 311 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 89/306 (29%), Positives = 149/306 (48%), Gaps = 20/306 (6%) Query: 73 FKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSG 131 F VA W +K W+++ + + + L +AL + I+ L T ++ P+ S Sbjct: 8 FHLVAERWLDFKRKEWADETYRKADFVVREYLTSALRNKPISTLATSEV-KPVLGAIASH 66 Query: 132 RLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL-ELKRIPELLTK 190 +A + +Q I+ YAVQ+GL + A + G V + H PA+ + I L+ Sbjct: 67 APNLATKARQYVGGIVTYAVQNGLREDGAALTLRGVVPRHRKGHIPAITKPADIAPLVHA 126 Query: 191 IDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRG 250 ID+Y P+TR A++LT+L +R + W E++ + + W + ER Sbjct: 127 IDAYRS-PITRAALKLTMLTGLRPGVVAAVPWDEVNLKTAEWHVAAER------------ 173 Query: 251 SKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP-MSENTVNSALRVMGYDT 309 KMR H+VPL QA+AILK+++ G +F P + + ++ ALR MG+ Sbjct: 174 MKMRHDHIVPLPKQAVAILKEVQSLTGKGHYVFPSPARQKTPHLHRDALSKALRDMGFQG 233 Query: 310 KVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQW 369 K HGFR M + E D +E Q++H R V+ AY + ++RR +++ Sbjct: 234 K--HATHGFRGMLRTVGRERLGMDIDVLEAQLAHAKRGDVQKAY-DRTTFDDDRRRVMRE 290 Query: 370 WADFLD 375 WAD++D Sbjct: 291 WADYID 296 >UniRef50_B4SNF6 Integrase family protein n=2 Tax=Proteobacteria RepID=B4SNF6_STRM5 Length = 397 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 108/384 (28%), Positives = 183/384 (47%), Gaps = 36/384 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V + +K W +YR+EGK+ + LG I LA+AR ARK++ +G DP + Sbjct: 28 LYLQVTASCAKSWVFRYRFEGKRPEMGLGPLHVIGLAEAREAAGAARKMVQSGQDPLAGR 87 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSE-DHAHRVLKSLEDNLFAALGERNIAELKTR 118 + V + TF E A + + W+ HA + ++LE LG+ + ++T Sbjct: 88 RAAAVATASIPTFWEAATAYIAEREAGWTNPKHAGQWTRTLETYAKPVLGDLRVDRIETE 147 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIM-RYAVQSGLIDYNPAQ-------EMAGAVAS 170 +LA ++ + + + E A+R++QR A++ VQ NPA+ + A Sbjct: 148 HVLAVLRPI-WTTKTETASRVRQRMEAVLDAVTVQKKRSGENPARWRGHLAVILPKPTAV 206 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 ++ AL +P + + S G A+E T+L R+ A E+D A Sbjct: 207 TKVENFAALPYAELPSFMAALRSRHGEAAR--ALEFTILTAARTGMTLGATPGEVDLAAG 264 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILK-QIKQFYGAHDLIFIGDHDS 289 WT+P R K + H VPLST ALA+ + +IK+ DL+F D S Sbjct: 265 TWTVPGSR------------MKAKVEHTVPLSTPALALARPRIKR-----DLLFPNDL-S 306 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 ++P+SEN + + L+ MGY + HGFR+ E + D E ++H R+ Sbjct: 307 NEPLSENAMLALLKRMGYGY---ITVHGFRSTFKDWASEMTDYPDDLSEAALAHRIRDKA 363 Query: 350 RAAYIHKAEHLEERRLMLQWWADF 373 +AAY + +++RR ++ WA++ Sbjct: 364 KAAY-KRGTMIQKRRELMNSWAEY 386 >UniRef50_A4A7S2 Phage-related integrase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7S2_9GAMM Length = 412 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 118/403 (29%), Positives = 182/403 (45%), Gaps = 48/403 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV GSK W +Y++EG+++ L LG YP ++LA AR+RRD AR G DP + + Sbjct: 28 LYLLVARGGSKNWIYRYQHEGRRRELGLGGYPAVSLAKARMRRDAARDQRQQGHDPLEVR 87 Query: 61 KNDKVE------------QSKARTFKEVAIEWHGTNKK-WSE-DHAHRVLKSLEDNLFAA 106 + + + A TF VA E+ N W+ H + +L+ F Sbjct: 88 DRQRAQLRAQMAAETAERERAAMTFLRVADEFIDNNAAGWTNRKHGQQWRNTLKTYAFPI 147 Query: 107 LGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQ--- 162 LG + E+ T +L + + + + E A RLQ R ++ YA G + NPA+ Sbjct: 148 LGVVPVGEVTTDQVLQVLTPI-WTEKTETAKRLQGRIERVLDYATTKGHREGDNPARWRG 206 Query: 163 EMAGAVASCNRQHR-------PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSS 215 + + + HR P LE + LT +D+ GR A+ LTLL R+S Sbjct: 207 HLDNVLPRPGKVHRVEHQRALPYLEAPELAAKLTDVDTAAGR-----ALLLTLLCATRTS 261 Query: 216 ELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF 275 E A WSEID + W IP R K H +PL A+A+LK Sbjct: 262 ETLEATWSEIDLDRKEWRIPAVR------------MKAGKEHRIPLCDAAVAVLKTQSVH 309 Query: 276 YGAH-DLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSR 334 G D +F G K +S + + L+ + + V HG R+ + E + Sbjct: 310 QGERGDWVFPG-QKRGKCLSNMAMTNVLKRTDWLERTSV--HGLRSTFRDWVGEKTRYPE 366 Query: 335 DAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 E ++H + V+AAY +A+ +E+RR M+ WA FL + Sbjct: 367 RMAEVALAHQLTDKVQAAYF-RADLMEQRREMMNEWAAFLGCD 408 >UniRef50_Q7V8P5 Phage integrase n=3 Tax=Cyanobacteria RepID=Q7V8P5_PROMM Length = 422 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 109/410 (26%), Positives = 186/410 (45%), Gaps = 56/410 (13%) Query: 1 MHLLVHP---NGSKYWRLQYRYEGKQKMLALGVYP----EITLADARVRRDEARKLLA-- 51 +++LV P +G K + + R GKQ + +GV+ + TL AR DE +L + Sbjct: 26 LYVLVEPVKGSGGKSFVGKMRSNGKQIDVRIGVFGKGPGQWTLKAAR---DEWFRLRSWY 82 Query: 52 --NGVDPGDKKKNDK---VEQSKARTFKEVAIEW---HGTNKKWSEDHAHRVLKSLEDNL 103 G DP + +K++K +QS +T E+ + T K SE L + + Sbjct: 83 RETGRDPRELQKDEKRQLAKQSSDQTLNELVDSYLIACKTKYKQSETTIKDKKNKLSNEI 142 Query: 104 FAALG-----------ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQ 152 ALG E++ + ++E G L A ++ + YA++ Sbjct: 143 IPALGGSTPVSRLGWDEKSKGRTGREAVFEITDSIEKRGSLNQARKVLGVMRHLFDYAIE 202 Query: 153 SGLID--YNPAQEMAGAVASCNRQHRPALELKRIPELLTKID--SYTGRPLTRWAIELTL 208 G ++ NPA + A QH P L +P+LL ++ G + AI+L L Sbjct: 203 RGWMERGQNPAVQARSVGAGHEVQHNPCLSWDELPQLLDDLNRNKGNGSQVVLAAIKLDL 262 Query: 209 LIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRT--THLVPLSTQAL 266 + F+R L RW E+D+ A++WT+P GS+M++ H VPL+ Sbjct: 263 MTFLRVGSLVPMRWDEVDYAANLWTVP--------------GSRMKSGKNHWVPLTDPIK 308 Query: 267 AILKQIKQFYGAHDLIFIGDHDSHKP-MSENTVNSALRV-MGYDTKVEVCGHGFRTMACS 324 +L +++ G D +F KP + E+ +N L+V +GY + HG R++ + Sbjct: 309 DLLAHLRKINGDQDYVFWSPRGRSKPHIDESALNQHLKVRLGYGGRQ--TAHGLRSLPLT 366 Query: 325 SLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 + E +S + ++RQM H + VR AY K++ L+ER ++ W D L Sbjct: 367 AGQEVLKFSAEVIQRQMDHAVGDKVRQAY-DKSQLLDERWKFMRAWCDAL 415 >UniRef50_B0QT04 Prophage CP4-57-like integrase n=1 Tax=Haemophilus parasuis 29755 RepID=B0QT04_HAEPR Length = 304 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 12/249 (4%) Query: 1 MHLLVHPNGSKYWRLQY----RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP 56 + L V NG K+W Y K+ L +G YPEI+LA AR+ RDE R LLA +DP Sbjct: 31 LFLRVKANGKKFWLFNYYKPFSTPPKRTNLGIGAYPEISLAQARLIRDEWRALLAKNIDP 90 Query: 57 GDKKKN--DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKS---LEDNLFAALGERN 111 ++N D+ + TF+ VA +W KK E + K+ LE++LF+ +G Sbjct: 91 KVHRQNIVDEEISKRENTFEAVAKKWR--EKKSLEVQPKTMEKNWARLENHLFSKIGNVA 148 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC 171 ++E+ + ++ ++ ++ G + R+ + ++ +AV GLI++N ++ ++ Sbjct: 149 VSEITPKMVIKAVEPLKERGVGDTLHRVIRLLNEVLNFAVNMGLIEFNKCVNVSANFSTH 208 Query: 172 NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 ++ P + + +PE L+ +D + I+ LL +R E W EIDF Sbjct: 209 TAENNPTIRPELLPEFLSDLDDSNSSIQVKILIKWQLLTMVRPREAVSVEWQEIDFAKKT 268 Query: 232 WTIP-PERE 239 WTIP P+ E Sbjct: 269 WTIPAPKNE 277 >UniRef50_B7A0D7 Integrase n=1 Tax=Escherichia coli O157:H7 str. TW14588 RepID=B7A0D7_ECO57 Length = 364 Score = 111 bits (278), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 92/294 (31%), Positives = 141/294 (47%), Gaps = 31/294 (10%) Query: 3 LLVHPN---GSKYWRLQYRYEGKQKM--LALGVYPEITLADARVRRDEARKLLANGVDPG 57 L +HP+ G W +Y QK LG YPE+++A+A R+ LA G DP Sbjct: 27 LTLHPSSVKGRGKWVFRYVSPVTQKRRNAGLGTYPEVSIAEAARTARIMREQLAAGDDPL 86 Query: 58 DKKKNDKVEQSKARTFKEVAIEWHG-TNKKW-SEDHAHRVLKSLEDNLFAALGERNIAEL 115 + KK + E+ TF + A H + W + H + L +LE+ F LG + + + Sbjct: 87 EIKKAES-EKVAIPTFADAARRVHAELSPGWENPKHVRQWLSTLENYAFPQLGAKTLDSI 145 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-- 173 D+ ++ V ++ E A+R++QR +M++ G NP + + R Sbjct: 146 TAADVAETLRPVWLTLS-ETASRVKQRIHVVMQWGWAHGFCVANPVDVVDHLLPQQTRGR 204 Query: 174 -QHRPALELKRIPELLTKIDSYTGRP--LTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 +H+PA+ +++P L YT P +TR + + +L RS E R RW+EIDF Sbjct: 205 DEHQPAMPWRQLP-LFVATSVYTDEPYNVTRALLLMVILTATRSGEARGMRWAEIDFHKR 263 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD-LIF 283 +WTIP ER K R H VPLS QA+ IL+ I+ G HD L+F Sbjct: 264 VWTIPAER------------MKARIQHRVPLSRQAIYILENIR---GLHDELVF 302 >UniRef50_B7WXB5 Putative uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WXB5_COMTE Length = 234 Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 72/184 (39%), Positives = 102/184 (55%), Gaps = 4/184 (2%) Query: 9 GSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQS 68 KYWRL YR EGKQK LALGVYP ITLA AR RD+AR LLA G+DP K+ K +++ Sbjct: 9 AGKYWRLAYRLEGKQKTLALGVYPAITLAQARRGRDDARALLAQGIDPSQNKQRLKEDKA 68 Query: 69 -KARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIK 125 A E + NK+ WS H R +SLE +L+ LG+R I E++ +LL + Sbjct: 69 VAALNTVEAMYRAYLANKRPGWSTTHYDREARSLEKDLYPFLGQRVIGEVEPTELLKACE 128 Query: 126 AVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL-ELKRI 184 V +E A RL + + +YA+ + AQ++ A+ + H PA+ + ++ Sbjct: 129 RVRDRDAVESAHRLLTTASGVWQYAIARSCATRDIAQDIKKALKPRQKGHFPAITDPGKL 188 Query: 185 PELL 188 ELL Sbjct: 189 GELL 192 >UniRef50_D1DCL4 Predicted protein n=8 Tax=Neisseria gonorrhoeae RepID=D1DCL4_NEIGO Length = 356 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 98/327 (29%), Positives = 151/327 (46%), Gaps = 41/327 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LL+HPNGSKYWR++YR+ G +K LALGVYP ++L AR AR A G+DP Sbjct: 30 LYLLLHPNGSKYWRMRYRHGGCEKTLALGVYPAVSLKQARELARAARAQTAAGIDP--VA 87 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHA----HRVLKSLEDNLFAALGERNIAELK 116 ++ + R+ E+A W+G+ + D+ R L L D +I ++ Sbjct: 88 EHHRTRPGSGRSLPEIARAWYGSRQGQRADNTLEGDRRSLAYLTDYY---KDNTDINDIT 144 Query: 117 TRDLLAPIKAVEMSGRLEVAA---RLQQRTTAIMRYAVQSGLID---YNPAQEMAGAVAS 170 T + K +E R+ + A R Q I YAVQ G+I NPA + + Sbjct: 145 TAGV---SKFIEHLNRINIPACARRTVQILAQIWDYAVQRGIITDERRNPATTARPLLNT 201 Query: 171 CNRQHRPALELKRIPELLTKIDS-YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 + +P + +P+ + + + P R + L L R S L ARW +ID A Sbjct: 202 SKPKPQPHIRPDELPDFYRTLQTAHDLHPYARPLLLLAALTVPRPSALLSARWQDIDLTA 261 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTH--LVPLSTQALAILKQIKQFYGAHDLIFIGDH 287 +W IP + M+T H VPLS A+ IL+++ G + +F G Sbjct: 262 RLWHIP--------------AADMKTKHPFTVPLSDWAVEILRELHTQTGDNIHLFPGIR 307 Query: 288 DSHKP------MSENTVNSALRVMGYD 308 KP +S ++A+R +GYD Sbjct: 308 PRRKPAPHPDHISIKFAHNAIRRLGYD 334 >UniRef50_B0SXU9 Integrase family protein n=6 Tax=Proteobacteria RepID=B0SXU9_CAUSK Length = 399 Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 104/382 (27%), Positives = 170/382 (44%), Gaps = 37/382 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + G + W Y K+ L LG +++LA+ARV R +LA+G+DP Sbjct: 28 LYLSIDDGGRRRWVFIYTRGAKRTELGLGGGRDLSLANARVEAAAFRTMLADGLDP---- 83 Query: 61 KNDKVEQSKARTFKEVAIEW-HGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K ++ +A+TF A + W +E HA + +L A + ER + EL T+ Sbjct: 84 KVERARDDQAQTFGACADAYVEAMRPSWRNEKHAAQWKMTLT-KYAAPIRERPVKELTTQ 142 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL-IDYNPAQ------EMAGAVASC 171 D+L ++ + + E A RL+ R ++ A GL NPA+ ++ Sbjct: 143 DILDVLQPL-WTRTPETAERLRGRMENVLDAAKAKGLRTGENPARWRGHLNQLLPKRQRL 201 Query: 172 NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 R H AL IP+ + + + + + A+E +L RS E+ A W+E D + + Sbjct: 202 ARGHHAALAYDLIPDFMANLRTRSA--VAARALEFAILTASRSGEVLGATWNEFDLDKKV 259 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W IP R K H VPLS +A+ I + QF +F G K Sbjct: 260 WVIPATR------------MKAGREHRVPLSARAMEIAEA--QFDDGKGYVFAGPKLG-K 304 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 P+S + LR M D V HGFR+ E+ +S + E ++H N A Sbjct: 305 PLSSMAMAMLLRRMKSDITV----HGFRSSFRDWASETTGFSHEVCEMALAHTIANKAEA 360 Query: 352 AYIHKAEHLEERRLMLQWWADF 373 AY + + ++RR +++ WA + Sbjct: 361 AY-RRGDLFDKRRKLMEAWAGY 381 >UniRef50_A4SXW8 Phage integrase family protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SXW8_POLSQ Length = 434 Score = 107 bits (267), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 100/396 (25%), Positives = 175/396 (44%), Gaps = 58/396 (14%) Query: 22 KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQ----SKARTFKEVA 77 K++ + LG +LADAR + E R+L+ +G+DP + + K ++ + TFKE A Sbjct: 57 KRREMGLGSLEARSLADARRKTLELRQLVMDGIDPTEDRCKAKSKRITAINNGITFKEAA 116 Query: 78 ---IEWHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAELKTRDLL-----------A 122 IE G +W S HA + ++ + +GE + ++ T + Sbjct: 117 ERCIE--GRKAEWKSSKHADQWRNTISTFAYPEIGELRVDQINTSHIAKLLEQEIKNKNG 174 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC--------NRQ 174 ++ + R E A R++QR I + I + + GA+ + Sbjct: 175 TVEGTFWNVRTETATRVRQRIEVIFDWCKAHEYIKGDNPARLKGALGHLLPKAKKIQKKS 234 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H PAL +RI E + + + G + A+EL +L R+SE+ A+W+E + E +W I Sbjct: 235 HHPALPFQRIGEFVKDLREHNG--YSALALELLILTATRTSEVIEAKWTEFNLETKVWVI 292 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD-HDSHKPM 293 P R K H VPL+T+A+ IL+ +K +F G H + Sbjct: 293 PAAR------------MKAGKEHRVPLNTRAMEILEHLKTI-SVSSYLFPGSLHKEESHL 339 Query: 294 SENTVNSALRVM----GYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 S + S +R M GY HGFR+ E+ + + VE ++H +N Sbjct: 340 SNMALLSMMRKMPKYSGY------VPHGFRSTFRDWAAETTDYPNETVELALAHTIKNKA 393 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLD--VNRERFIS 383 AAY + + LE+R ++++ W ++ +N+ +S Sbjct: 394 EAAY-RRQDQLEKRTVLMEEWGAIVNAAINKNENLS 428 >UniRef50_Q1GUV7 Phage integrase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GUV7_SPHAL Length = 403 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 107/372 (28%), Positives = 175/372 (47%), Gaps = 52/372 (13%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G+ W L+ + +GK++ + LG +TLA+AR + E RK A V+ D Sbjct: 25 LFLKVGKTGAASWLLRLQRDGKRQDIGLGSAKLVTLAEARAKAAELRK--AVKVEKRDVL 82 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSED-HAHRVLKSLEDNLFAALGERNIAELKTR 118 K E++ TF+E A ++H N+ W D + + L SLE+ F LG+ + Sbjct: 83 TERKDEEAAKVTFREAATQYHSENEAGWKSDVYGRQWLASLENYAFPKLGDMTTGGITAA 142 Query: 119 DLLAPIKAV--EMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG-----AVASC 171 D+++ + + E+ E A +++ R A++ Y+ G + ++ +G A Sbjct: 143 DIISVLTPIWQEIP---ETARQVRNRICAVLDYSHAKG---WRSSEAPSGNSSLKAGRGL 196 Query: 172 NRQ-----HRPALELKRIPELLTKI---DSYTGRPLTRWAIELTLLIFIRSSELRFARWS 223 RQ +R A+ +P LT + SY+ R A++L +L +RS E+R A+W Sbjct: 197 PRQIKKPANRKAMPYVAVPPFLTALRRKPSYS-----RLALDLLILTGVRSQEVRLAKWD 251 Query: 224 EIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIK--QFYGAHDL 281 E D + +WTIP E H R H+VPLS ALA+L + + GA ++ Sbjct: 252 EFDLDQRLWTIPAE--------HMKRSR----AHIVPLSEAALAVLVKADAMRLEGA-EV 298 Query: 282 IFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQM 341 +F G + K MS T+ +R M V HGFR+ G VE + Sbjct: 299 VFPG--MTGKAMSNMTLLKVMRDMQEPFHV----HGFRSSFTDWAANEGF-PNAVVEAAL 351 Query: 342 SHMARNSVRAAY 353 +H ++V+AAY Sbjct: 352 AHKTPDAVQAAY 363 >UniRef50_B0T5C0 Integrase family protein n=31 Tax=Proteobacteria RepID=B0T5C0_CAUSK Length = 436 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 106/403 (26%), Positives = 189/403 (46%), Gaps = 51/403 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V G K W +Y +G+ + + LG I+L++AR +AR+L +G+DP +++ Sbjct: 28 LYLMVQKGGGKSWVYRYMLQGRAREMGLGPAHTISLSEARAMARDARRLKFDGIDPIEQR 87 Query: 61 K----NDKVEQSKARTFKEVAIEWHGTNKK-W-SEDHAHR---VLKSLEDNLFAALGERN 111 + +E +K TFK+ + + NK W +E HA + L + D +F G R Sbjct: 88 QLARTRTTLEAAKGFTFKQASSAYIRANKAGWRNEKHAQQWESTLTTYADPIF---GSRG 144 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPA------QEM 164 ++++ T +LA ++ + S + E A+R++ R A++ +A GL + NPA +++ Sbjct: 145 VSDIDTGMILAVLEPI-WSTKPETASRVRGRVEAVLDWATARGLREGENPARWKGHLEKL 203 Query: 165 AGAVASCNR-QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWS 223 A + ++ +H AL + + + G A+E T+L R+ E+ A WS Sbjct: 204 LPAKSRVHKVEHHAALPYAELSAFMAALKDQPGAGAR--ALEFTILTAARTGEVIGAEWS 261 Query: 224 EIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA----- 278 EID +W IP +R K R H VPL+ + IL+ K Y A Sbjct: 262 EIDLAGQVWIIPADR------------MKGRKEHRVPLTAPLIEILEGRKADYAAVIRRV 309 Query: 279 ---------HDLIFIGDHDSHKPMSENTVNSA-LRVMGYDTKVEVCGHGFRTMACSSLVE 328 D+ +G + N A L V+ + ++ HGFR+ E Sbjct: 310 LESKRQPIPDDIPPVGPLFWGTLFGKKLSNMAMLAVLKRMKREDLTAHGFRSTFRDWAAE 369 Query: 329 SGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWA 371 + + + VE ++H N V AAY + + E+R+L+++ WA Sbjct: 370 TTEYRSEIVEMALAHTIGNKVEAAY-RRGDLFEKRKLLMEDWA 411 >UniRef50_A6U968 Phage integrase family protein n=2 Tax=Rhizobiales RepID=A6U968_SINMW Length = 391 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 90/352 (25%), Positives = 166/352 (47%), Gaps = 30/352 (8%) Query: 33 EITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHA 92 +++LA AR + +E R +L G DP + ++ E+ K TF + A + + + Sbjct: 61 QVSLAAARTKAEEIRTILGRGGDPF-TEMGERQEKVKPTTFGQCADDLVDAMESQWRNEK 119 Query: 93 HRVLKSLEDNLFA-ALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAV 151 HR + +A A+ + +AE+ T D++ +K + S + E A+RL+ R ++ +A Sbjct: 120 HRAQWRMTLTEYAKAIRKLPVAEVTTDDVVRVLKPI-WSTKAETASRLRGRIEKVLDHAK 178 Query: 152 QSGL-IDYNPAQ------EMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAI 204 GL NPA+ + R H A+ +P + KI +G + A+ Sbjct: 179 VRGLRTGENPARWKGHLDHILPKAGKLKRGHHAAMPYADVPAFIKKIREASG--VGARAL 236 Query: 205 ELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQ 264 E T+L R+ E A+W+E DF ++WT+P ER +G + H VPL+ + Sbjct: 237 EFTILTASRTGETMGAKWAEFDFRENVWTVPAER---------MKGGR---EHRVPLTDR 284 Query: 265 ALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACS 324 LA+L ++K+ +D +F G ++ P+S T+ ++ D HGFR+ Sbjct: 285 VLAVLTEMKK-RSVNDFVFPGS-KANTPISNMTMTKVMKTYEADA---FTVHGFRSAFRD 339 Query: 325 SLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDV 376 E + + E ++H+ + AY + + LE+RR +++ W + +V Sbjct: 340 WASEETEFQGEVAEAALAHITGDETERAY-RRGDVLEKRRKLMEAWETYCEV 390 >UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas putida RepID=B0KFC6_PSEPG Length = 436 Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 101/383 (26%), Positives = 181/383 (47%), Gaps = 39/383 (10%) Query: 10 SKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQ-- 67 S++WRL+YR GK+ + +G YP++ L +AR AR +AN +DP K K K+E Sbjct: 64 SRHWRLKYRLRGKENVYVIGRYPDVGLKEARELARAARNSVANHIDP-LKAKKAKIEAQW 122 Query: 68 -SKARTFKEVAIEWHGTNKKWSEDHAHRVLK----SLEDNLFAALGERNIAELKTRDLLA 122 ++ARTF VA EW K S D + + +L++++ A+GER ++E+K + A Sbjct: 123 LNEARTFAYVAEEWM---KFKSADLVSKSVAGFRGALQNHILPAIGERPVSEIKLEHITA 179 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPA------QEMAGAVASCNRQHR 176 I + + +A R++ +I+ +A G ++ N A ++ V S R Sbjct: 180 IITELRYKRIMAMARRVRTIIRSILGFAEGRGWVERNVALSNTEELKIRHVVTSNPAIER 239 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 PA + + L ++D + +A+ L +L+ +R EL RW ++D + W Sbjct: 240 PA----DLGKFLLRLDDLNLGSVA-YAMRLLVLLPVRPGELVKMRWEDVDLIGADW---- 290 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDL----IFIGDHDSHKP 292 R + KH ++ H+VPL QAL +L+++ + D +F + Sbjct: 291 -RYVVSKTKHLD-----KSKHIVPLPEQALVLLRELHKDRVVDDAGNGWVFGSPVYPGRS 344 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 + ++ +L+ + + + HGFR + E +E +SH ++ A Sbjct: 345 IDATSILKSLQKVW--PEYAITAHGFRATYRTIAHEHLGIDPIVLELSLSHRMPGALGAV 402 Query: 353 YIHKAEHLEERRLMLQWWADFLD 375 Y +A+ L +RR Q WA++LD Sbjct: 403 YA-RAQLLSQRREAAQLWANYLD 424 >UniRef50_B9KC61 Site-specific recombinase, phage integrase family n=5 Tax=Campylobacter RepID=B9KC61_CAMLR Length = 392 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 98/388 (25%), Positives = 180/388 (46%), Gaps = 49/388 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V+P+G K ++ + + + LG YP ++LA+ R + KL A G + + K Sbjct: 34 LYVFVYPSGRKLFKTR---QANDTYITLGEYPLLSLAELREIAINSHKLKAKGQNISNAK 90 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSL--EDNLFAALGERNIAELKTR 118 + K + +E N + S A + + L ++ +F +L +NI ++K Sbjct: 91 R------LKFGVLYDEVLE----NARKSNLAAKTIQRGLSYKEGIFKSLEYKNINDIKRV 140 Query: 119 DLLAPIKAVEMSGRLEVAARLQQR---TTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ- 174 D++ +K +E +A LQ+ + YA+Q +I+ NP + + Sbjct: 141 DIVNILKTIEHK-----SATLQKAKIWINKVFEYALQLEIIENNPVASIKNNIVFKKPNQ 195 Query: 175 --HRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 H+P L + I E + + + + + LL R + A W EIDF+ I Sbjct: 196 VIHQPTLLDESDIKEYINTLIHSDIKQSHKNLMLFVLLTAQRPGNVIKATWDEIDFKNEI 255 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 WTI ++ KMR H + LS QA++ILK + +D +F G Sbjct: 256 WTISAQK------------MKMRKEHNIALSKQAISILKN-QYAIKVNDYVFAGS-SKKG 301 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTM----ACSSLVESGLWSRDAVERQMSHMARN 347 SEN + + +GY K HGFR M A +E G+ S D E+ ++H +N Sbjct: 302 CNSENITCNTNKRLGY--KGIQSAHGFRAMFRSIANEKQLEHGV-SMDIAEQCLAHEQKN 358 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLD 375 ++ AY ++++++E +R+++QWW D+++ Sbjct: 359 AILKAY-NRSKNIELKRILMQWWGDYIE 385 >UniRef50_B8IIS8 Integrase family protein n=9 Tax=Alphaproteobacteria RepID=B8IIS8_METNO Length = 420 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 107/389 (27%), Positives = 181/389 (46%), Gaps = 40/389 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V P G K W YR G+++ + LG + LA AR EAR +A GVDP D + Sbjct: 40 LYLVVDPAGGKRWVFLYRMAGRRREMGLGPVLSVPLARARELAAEARAQVAGGVDPIDAR 99 Query: 61 KNDKVEQSKAR--TFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELK 116 + ++ TF EVA E + T+++ W R + + A+L +A++ Sbjct: 100 RAPPSDEPPPHRITFAEVA-EVYMTDRERAWRNAAHRRQWRQTLEVQAASLWAMPVADVN 158 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSG-LIDYNPAQ------EMAGAVA 169 T +LA ++ + S + E A RL+ R I+ A +G NPA+ + Sbjct: 159 TEAVLAVLRPIWHS-KAETARRLRGRIERILDAARVAGHRGPENPARWKGHLDVLLPRAG 217 Query: 170 SCNRQHRPALELKRIPELLTKI---DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 R H AL +P + +I ++ T R A+EL +L RS E+R W+E+D Sbjct: 218 KLQRGHHNALPYMEVPAFVAEIRQREAQTAR-----ALELLILTAARSGEVRGMTWAEVD 272 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIK-QFYGAHDLIFIG 285 ++WT+P ER K + H VPL +A+ IL ++ + A LIF Sbjct: 273 LVGALWTVPKER------------MKAKRPHRVPLCARAVEILSKLHLEAPDAEGLIFPS 320 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 +D+ +S+ + LR Y ++ HGFR+ + R+ +E ++HM Sbjct: 321 RNDTV--LSDMVFAALLRRAKYP---DITAHGFRSSFRDWAADETDHPREVIEAALAHMV 375 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFL 374 ++ AY + + L +RRL++ W ++ Sbjct: 376 GDATERAY-RRGDALAKRRLLMDDWGAYV 403 >UniRef50_C6XJP3 Integrase family protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJP3_HIRBI Length = 395 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 110/403 (27%), Positives = 176/403 (43%), Gaps = 66/403 (16%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V G++ W YR+ K+ + LG YP ++L++AR + R L N D K Sbjct: 28 LYLNVKQTGARNWLFIYRWGDKRPSIGLGGYPSVSLSEARKQAAMCRDWL-NQTPRKDPK 86 Query: 61 KNDKV---EQSKARTFKEVAI-----------------EWHGTNKKWSEDHAHRVLKSLE 100 K V + + F A+ +W T ++++E + L +E Sbjct: 87 KEWMVLNAPEVRIEPFGPFALRHIDAIKGDFRNAKHIAQWRSTLERYAEPIWAKPLNEIE 146 Query: 101 -DNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLI-DY 158 D++ L PI A + E A R++ R A++ A G+ D Sbjct: 147 VDHVL--------------KCLEPIWAT----KNETARRVRGRIEAVLESARVRGMREDP 188 Query: 159 NPAQEMAGAVASCNRQ-----HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIR 213 NPA R+ H ALE ++ + +G + A++ T+L R Sbjct: 189 NPASWNGQLKHVLGRKRPKQKHLAALEYDQMHAFWQTLRQKSG--IGALALQFTILTAAR 246 Query: 214 SSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIK 273 S E+R A W+EID EA IW+IP ER K H+VPLS ALAI+ I Sbjct: 247 SGEVRGATWNEIDIEAGIWSIPAER------------MKAEKPHMVPLSQAALAIIDHIS 294 Query: 274 QFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKV--EVCGHGFRTMACSSLVESGL 331 + +LIF+G + KP+S+ T+ ALR M V HGFR+ Sbjct: 295 KARQG-ELIFMG-MRAGKPISDMTMTKALRDMKLTNSQGEAVTAHGFRSTFSDWARNETD 352 Query: 332 WSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 + R+ +E ++H + V AAY + + +E RR +++ WA ++ Sbjct: 353 FPRELIEESLAH-SLGKVEAAY-RRGQAIERRRALMEAWALYV 393 >UniRef50_B6JEM3 Phage integrase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JEM3_OLICO Length = 390 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 107/399 (26%), Positives = 177/399 (44%), Gaps = 55/399 (13%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE----ITLADARVRRDEARKLLANGVDP 56 + + V GS+ W YR ++ + LG Y + ++L AR + D R+ LA G DP Sbjct: 26 LFIRVQKTGSRNWLFVYRRGQQRNEIGLGGYGQGTAPVSLPLAREKADAIRQQLARGEDP 85 Query: 57 GDKKKNDKVEQSKARTFKEV------AIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGER 110 + + + K +TF EV A E TN K +E L++ L L Sbjct: 86 --RASRNAI---KPKTFGEVMEQLLTAKESEWTNPKHAEQW-KMTLRTYAKPLHR-LPVA 138 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAV-----QSGLIDYNPA---- 161 +I +D + P + R E AARL+ R A++ YA+ +G NPA Sbjct: 139 DIVMGDVKDCILP----HWAERPETAARLRSRIQAVIDYAIAHEWRSAG----NPARWGG 190 Query: 162 --QEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRF 219 +++ +R H AL P+ + + +G A+E L RS E R+ Sbjct: 191 LLEKVMPKRQKLSRGHHAALAYADAPQTIEALRHSSGTAAR--AVEFIALTVARSGEARY 248 Query: 220 ARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAH 279 + ++E+D +A WT+P ER K H+VPL+ +AL I++ ++Q Sbjct: 249 STFAEVDVKAKTWTVPAER------------MKAGKEHIVPLTARALQIVEAMRQ-RATG 295 Query: 280 DLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVER 339 D IF G DS KP+S+ + ALR+ D + HG R+ + + RD E Sbjct: 296 DYIFGGAQDS-KPISDTAMVKALRLASPDKAATL--HGLRSTFRDWAGDKTKFPRDIAEM 352 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNR 378 ++H + AY ++ L +RR ++ W +L+ ++ Sbjct: 353 ALAHAVGDETERAY-RRSTALAQRRKLMDAWERYLNTDK 390 >UniRef50_B5J8B6 Site-specific recombinase, phage integrase family protein n=2 Tax=Rhodobacteraceae RepID=B5J8B6_9RHOB Length = 436 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 99/389 (25%), Positives = 173/389 (44%), Gaps = 43/389 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKM--------LALGVYPEITLADARVRRDEARKLLAN 52 ++L+V P+G++ W ++ +G++ LG +T+ AR R E R++ Sbjct: 65 LYLVVDPSGARRWIVRVVVKGQKNKKGAPLRTDFGLGGADIVTINQARDRALEYRRMAKQ 124 Query: 53 GVDPGDKKKNDKVEQSKARTFKEVAIEWHGTN-KKW-SEDHAHRVLKSLEDNLFAALGER 110 G++P + D TF+E A + H W + H + + +L D F +G Sbjct: 125 GLNPRFNAQRD------IPTFEEFAQQVHIERMPTWKNAKHGQQWINTLRDYAFPKIGRM 178 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL-IDYNPAQEMAGAVA 169 + + +++ + + + + E A RL QR ++ A G NP + A A Sbjct: 179 PVDSIDQPEVMMCLSPI-WTEKHETARRLAQRIKTVLDVARSKGFRSGENPVTAIKDAQA 237 Query: 170 ----SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI 225 +H A+ + +P T D T ++ A+ T L R+SE+ RW EI Sbjct: 238 LPKVKTKPKHHKAMHWRDVPAFYT--DLKTRNAMSANALRFTCLTGSRTSEVLGMRWEEI 295 Query: 226 DFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG 285 DF+A +WT P ER K H VPL+ + L+I++ +K D +F G Sbjct: 296 DFDARLWTCPIER------------MKTGEVHRVPLTDEMLSIIEPLKAL--KSDYVFEG 341 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 HKP+S ++ LR M + V HGFR+ E R+ E +SH Sbjct: 342 -QKRHKPLSNMSMLMLLRRMDVEG---VTVHGFRSTFRDWASEVASAPREIAEMSLSHRV 397 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFL 374 + V AY +++ +E+RR +++ W+ ++ Sbjct: 398 GSDVERAYA-RSDLIEKRRALMKRWSMYV 425 >UniRef50_B3R3M6 Prophage integrase n=4 Tax=Bacteria RepID=B3R3M6_CUPTR Length = 418 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 97/387 (25%), Positives = 176/387 (45%), Gaps = 35/387 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++ + +GS+ W ++ G+ + + LG ++LA AR + R LL +GVDP + + Sbjct: 29 LYFQISESGSRSWIFKFTLRGRSREMGLGPLASVSLAAARAEAAKCRDLLRDGVDPIEAR 88 Query: 61 KNDK----VEQSKARTFKEVAIEWHGTNKK-W-SEDHAHRVLKSLEDNLFAALGERNIAE 114 K + +E S R FK A ++ ++ W +E HA + ++ LG++++ + Sbjct: 89 KCKQRQRMLELSGPRLFKAAAADYIAKHRAGWKNEKHAQQWTNTIATYAAPILGDQDVRD 148 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQ---EMAGAVAS 170 + T ++ ++ + + R E A RL+ R I+ G + NPA+ + + Sbjct: 149 IDTAMIVQVLQPIWIKKR-ETAFRLRGRLECILDAEKALGHREGENPARWRGHLDKLLPK 207 Query: 171 CNR----QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 NR +H PAL + IP + ++ G +E +L +R+ E++FAR E D Sbjct: 208 QNRRKKIKHHPALPWQEIPSFMKELREQRGTAAR--MLEHLILTVVRTQEVQFARPEEFD 265 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 +WT+P ER KM VP++ + + +++ GA D Sbjct: 266 MRYRVWTVPGER------------MKMELPLRVPMTDRLVELVE--AALPGARDGWLYPG 311 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 KP+S + L MGY V HGFR+ + + ++ E ++H + Sbjct: 312 RKKGKPLSNMAMLKLLERMGYG---HVTVHGFRSTFRDWVADCTEYADSLAEMALAHAIQ 368 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADF 373 N AAY + + LE RR M++ WA + Sbjct: 369 NESEAAY-RRGDMLERRRKMMRDWAHY 394 >UniRef50_Q31FR8 Tyrosine recombinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FR8_THICR Length = 396 Score = 100 bits (250), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 100/375 (26%), Positives = 163/375 (43%), Gaps = 34/375 (9%) Query: 14 RLQYRYE----GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSK 69 R ++RY+ K L LG YP ++L AR + R+LL G+DP + ++KV+ Sbjct: 37 RFKFRYQRPVNKKINNLVLGYYPSMSLKAAREIAQQYRELLKKGIDPKYQTSSEKVD--- 93 Query: 70 ARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVE 128 F + + K WSE H + E+ L G R+ A++ + D+ +++V Sbjct: 94 ---FDHIIQLYLKKGKADWSEKHFNTTKGRYENFLKNPFGNRDAAQITSFDIYNLLESVA 150 Query: 129 MSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-QHRPALEL------ 181 SG A +L + A G++ +NPA + V + Q P L Sbjct: 151 QSGSYGTAEKLSYIISGAYSQAAILGMVKFNPAAGVMKQVTKTKKTQQMPHFNLTRKGES 210 Query: 182 KRIPELLTKIDSYTGRPL-TRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 +R+ L I + + + A+ L+ L+F+RS L + D + I E Sbjct: 211 ERLGRFLNDIKALNKTNIAVKTALLLSPLLFMRSGSLASLKLESYDKDNKWLLINAE--- 267 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 +K H + +VPLSTQA+ +L+ + +F + +N Sbjct: 268 --DMKKDH------SDFIVPLSTQAINLLETLIAATKPKIYVFESRASKLGHIRIEAINK 319 Query: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 A G+ +V HG R A + L E G + + E Q+ H VR Y +KA HL Sbjct: 320 AKSRSGWRFD-DVTIHGLRHTATTYLTEIG-FDYEVTEMQLHHKLV-GVRGIY-NKAMHL 375 Query: 361 EERRLMLQWWADFLD 375 ++RR M+Q WAD+LD Sbjct: 376 DKRREMMQKWADYLD 390 >UniRef50_A3UHH5 Site-specfic recombinase, phage integrase family protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UHH5_9RHOB Length = 330 Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 91/339 (26%), Positives = 163/339 (48%), Gaps = 50/339 (14%) Query: 53 GVDP-GDKKKNDKVEQSKARTFKEVAIE-WHGTNKKWSEDHAHRVLKSLEDNLFAALGER 110 G+DP +++K+ KV S F+ A E + W + + S+E+++F +G + Sbjct: 20 GIDPVAERRKSRKVVPS----FETAARECYEALKDGWKNQNYRNWISSMENHVFPLIGRK 75 Query: 111 NIAELKTR---DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA 167 + ++ + ++L PI +E+ + A ++ QR A++ +A G +E A Sbjct: 76 PVDQVDSTHVVEVLTPI-WLEIP---DTARKILQRIGAVLDFAHIKGW------REEEAA 125 Query: 168 VASCNR---------QHRPALELKRIPELLTKIDSYTGRPLT-RWAIELTLLIFIRSSEL 217 + S + +H A+ IP + ++ T P T R A+ T+ +RSSE Sbjct: 126 LRSVRKGLPRQTDKVEHFKAMPYAEIPAFMKEL--ATASPTTGRDALRFTIYNAVRSSET 183 Query: 218 RFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYG 277 R A W+EID + ++WTIP ER K + TH+VPLS A++IL++ + Sbjct: 184 RKAVWTEIDLDKAVWTIPGER------------MKAKETHVVPLSKAAVSILRRRWKLRT 231 Query: 278 AHD-LIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDA 336 + D L+F ++ P+S+ T+ LR G HGFR+ E + ++ Sbjct: 232 SDDGLVF--SNNGENPISDMTMTKLLRDAGIKG---ATVHGFRSAFTDWAAEKTDFPKEV 286 Query: 337 VERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 ++ ++H N V AAY + + ++RR ++ WA FLD Sbjct: 287 ADKALAHKLSNQVEAAY-RRTDFFDKRRELMAVWAAFLD 324 >UniRef50_A3J962 Putative integrase prophage protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J962_9ALTE Length = 240 Score = 100 bits (249), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 98/180 (54%), Gaps = 4/180 (2%) Query: 4 LVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKND 63 LV GSKYW L+YR+ G +K L++G YP+++LA AR RD A++LL +DP ++ + Sbjct: 33 LVIKRGSKYWWLRYRFAGNEKTLSIGGYPQVSLAAARQARDSAKELLKQYIDPSAHRRQE 92 Query: 64 KVEQSK--ARTFKEVAIEWHGTNK--KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 +++ TF+ + +W+ + +E HA R + LE F L R I ++ D Sbjct: 93 STQRTSDGENTFRTLCEDWYQQKHCVEVTEAHAVRNWRRLEIYTFPQLARRPIRSIQPVD 152 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +L + + G +E A R++ + + RYAV + +D + +++ G + H+PAL Sbjct: 153 ILQVLDGIVKKGNIETAHRVKTLISLVFRYAVATSRVDSDVTRDLTGYLPKTQVIHQPAL 212 >UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NM52_9DELT Length = 406 Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 93/377 (24%), Positives = 169/377 (44%), Gaps = 34/377 (9%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 LLV P+G + W L+Y++EGK + + LG YP+++L AR + R ++ G+DP K+ Sbjct: 28 LLVLPSGRRSWLLRYQFEGKPRRITLGEYPDMSLLQARNASEATRSIIKQGLDPALKRTE 87 Query: 63 DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLA 122 +K + T ++ E+ K S R + +E ++ G+R +AE+ RD Sbjct: 88 EKTAHKTSPTVSDLLTEYWDMELKESPSGKER-RRLVEKDVLPPWGKRKVAEITRRDAAL 146 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELK 182 + V + RLQ + +A + G+++++P + + E+K Sbjct: 147 LLDTVRARAPV-TGNRLQGVLVRMFNFAAERGVLEHSPLMGLRKKKEQPRSRVLADKEIK 205 Query: 183 RIPELL----TKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 + + L T +D Y +++ A+++ LL R E+ W EID W IP ER Sbjct: 206 LLWDALALDNTAMDIYR---VSKLALKMILLTGQRPGEVCGMTWDEID--GDTWNIPAER 260 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYG-AHDLIFIGDHDSHKPMSENT 297 K + H VPL + AL I++Q +++ +F H P++ ++ Sbjct: 261 ------------MKSKEPHNVPLGSMALEIIEQARRYSPRGSTFVFKSSHFKEGPITPHS 308 Query: 298 VNSAL----RVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAV-ERQMSHMARNSVRAA 352 ++ A+ + MG + H R + L E G+ D V ER + H + + A Sbjct: 309 LSKAILRHWQEMGVTER--FTPHDLRRTLRTRLAEIGV--DDVVGERVLGHKLQG-IMAV 363 Query: 353 YIHKAEHLEERRLMLQW 369 Y + E+R+ + W Sbjct: 364 YNRHSYDKEKRQALALW 380 >UniRef50_B2CG14 Bacteriophage P4-like integrase n=3 Tax=Campylobacter fetus subsp. venerealis RepID=B2CG14_CAMFE Length = 417 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 100/402 (24%), Positives = 177/402 (44%), Gaps = 51/402 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 +++ V+P+G K + +QY+ K K G+Y ++A+AR E + NG Sbjct: 34 LYIKVYPSGLKIFVIQYKNINHFKLKEFREGIY---SVAEARKDAVELIRKFENGF---- 86 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + DK + + E I+ + + + +V ++ + G +I ++K Sbjct: 87 VRSKDKYQLT---ALFEKYIDKKEKIDQLDKTYLDKVKSRMKTYILPKFGNIDIKDIKFN 143 Query: 119 DL---LAPIKAVE--MSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 DL L P+ RLE R+ ++ A++ IDYNP + + + N Sbjct: 144 DLKNILMPLFNPHNPKKSRLETIHRIINTLNSLYENAIKDRYIDYNPCKALHDEFPTSNN 203 Query: 174 --------QHRPALELKR-IPELLTKIDSYTGRPL-TRWAIELTLLIFIRSSELRFARWS 223 PA+ + + E LT + + L T+ A+ L +L R + +W Sbjct: 204 FSLRNGIDTRYPAITSETDLKEFLTDLRDDSRMDLQTKRALMLQILCVNRPANTANMKWE 263 Query: 224 EIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAH-DLI 282 I+ + IW+IPP KMR H + LS QAL+IL + +Q+ D + Sbjct: 264 HINLKTEIWSIPPLE------------MKMRHAHQIALSKQALSILLEQRQYTPIQSDFV 311 Query: 283 FIGDHDSHKPMSENTVNSALRVMGYDTKVE--VCGHGFRTM---ACS----SLVESGLWS 333 F + +S ++++ A+R +G K C HGFR CS L G+ S Sbjct: 312 FPAVTKTGH-ISRDSISKAIRNLGSKDKYHSRACAHGFRATFKTICSLHFTELARLGI-S 369 Query: 334 RDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 +E ++H N+V+ AY + LE+ R+++QW+AD+L+ Sbjct: 370 EKTIENALAHTEPNAVKYAYERRTATLEQNRILMQWYADYLN 411 >UniRef50_A1W6C2 Phage integrase family protein n=8 Tax=Burkholderiales RepID=A1W6C2_ACISJ Length = 459 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 90/380 (23%), Positives = 176/380 (46%), Gaps = 36/380 (9%) Query: 11 KYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP----GDKKKNDKVE 66 K W +Y + + +G + LA+AR + +AR LL +GVDP + K Sbjct: 37 KSWIFRYARGTGEHFMGIGPVHTVNLAEAREQARKARLLLRDGVDPLMHRAEALAKAKAV 96 Query: 67 QSKARTFKEVAIEWHGTNKK-W-SEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPI 124 Q+ + F++ E+ ++K+ W +E H + +L + G+ ++ + T +L + Sbjct: 97 QASNKIFRDCMDEYIKSHKESWRNEKHQKQWEATLVEYACPVFGKMHVRLINTPLVLQVL 156 Query: 125 KAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPA------QEMAGAVASCNR-QHR 176 + + + + E A+R+++R ++ +A G + NPA QE+ + + +H Sbjct: 157 EPIWKT-KTETASRVRERIERVLAWATTQGFREGENPARWRGHLQELLPKPSKLKKVRHH 215 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 P+L + + + G + A++ T+L R+ E+ FA+W+EID +A +W IP Sbjct: 216 PSLPYGHVGAFVRLLAREKG--IAARALQFTILTACRTGEVIFAKWNEIDLDAKVWIIPK 273 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER K H VPL A+ +L++++ G + ++PMS Sbjct: 274 ER------------MKAHKEHRVPLVRDAVTLLERLR---GLDPVWVFPGAKQNRPMSNM 318 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 + + L M + ++ HGFR+ + E L+ ++ E ++H V AY + Sbjct: 319 AMANVLERM---QRSDITVHGFRSTFRTWAAERTLYPKEMPEMALAHKVGTEVEEAY-RR 374 Query: 357 AEHLEERRLMLQWWADFLDV 376 + E RR +++ WA++ V Sbjct: 375 TDLFERRRALMRDWAEWCSV 394 >UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KUI7_METC4 Length = 414 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 106/398 (26%), Positives = 171/398 (42%), Gaps = 53/398 (13%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V P G K W ++YR GK + L LG YP + LADAR A +A G DP +K Sbjct: 30 LYLVVQPAGGKSWAVRYRAAGKPRKLTLGPYPRLGLADAREAARTALHAVAEGRDPAGEK 89 Query: 61 KNDKVEQSKART--FKEVAIEW-----HGTNKKWSEDHAH--RVLKSLEDNLFAALGERN 111 + +VE + +T F VA ++ N+ W E + R L + + E++ Sbjct: 90 QAARVEVAAVQTMRFGAVAADYIERYAKPRNRSWRETESFLTRTLDATDK-----WQEKD 144 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC 171 + + +D+ + AV G A RL + V+ G++D +P MAG Sbjct: 145 VRAIGRKDVRDALDAVVARGASIHANRLFAALRRFFAWTVERGILDASP---MAGL---- 197 Query: 172 NRQHRPALELKRI---PELLT--KIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 + P + R+ EL+ K G P ++L +L R SE+ A W E D Sbjct: 198 -KPPSPEISRDRVLTDAELVAVWKAAGEVGYPFGP-VVQLLILTGQRRSEVVEAEWREFD 255 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 + + WTIP ER +K H+VPL+ QA+ IL+ I L+F Sbjct: 256 LDGATWTIPRER------------AKNDRAHVVPLAPQAVKILRCIPCVGTRSRLLFTTT 303 Query: 287 HDSHKPMSENTVNSALRVMGYDTK-----VEVCG---HGFRTMACSSLVESGLWSRDAVE 338 ++ + R+ G K +EV H R S G+ + VE Sbjct: 304 GET---AFSGVSKATDRLQGLSAKHLPEGIEVEPWRLHDLRRTFASGCARLGV-AVHVVE 359 Query: 339 RQMSHMA-RNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 + ++H++ +S + + +ERR ++ WA LD Sbjct: 360 KALNHVSGTHSGIVGVYQRHSYGDERRCAMELWAAHLD 397 >UniRef50_B2U8E1 Integrase family protein n=9 Tax=Proteobacteria RepID=B2U8E1_RALPJ Length = 417 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 97/397 (24%), Positives = 178/397 (44%), Gaps = 35/397 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +H + GS+ W ++ G+ + + LG ++LA AR + R LL G+DP + + Sbjct: 29 LHFQISATGSRSWIFKFTLRGRSREMGLGPLSSVSLAAARAEAAKCRDLLREGIDPIEAR 88 Query: 61 KNDK----VEQSKARTFKEVAIEWHGTNKK-W-SEDHAHRVLKSLEDNLFAALGERNIAE 114 ++ +E S R F+ + ++ ++ W + HA + +L LG++++ + Sbjct: 89 NAEQRKRALETSGPRLFRVASADYISQHRAGWKNAKHAQQWENTLATYANPILGDQDVRD 148 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQ---EMAGAVAS 170 + T ++ ++ + +S R E A RL+ R I+ G + NPA+ + + Sbjct: 149 VDTAMIVRVLQPIWISKR-ETAFRLRGRLECILDAEKALGHREGENPARWRGHLDKLLPK 207 Query: 171 CNR----QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 NR +H PAL + +PE + ++ + T +E +L +R+ E+ +AR E Sbjct: 208 QNRRKKIKHHPALPWQELPEFMRELRAVADS--TARMLEHLILTAVRTQEVLYARPEEFA 265 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 + +WT+P ER KM VP++ + + ++ + + GA D Sbjct: 266 MDYRVWTVPGER------------MKMELPLRVPMADRLVELVTEAMK--GARDGWLYPG 311 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 KP S + L MGY + HGFR+ + E ++ E+ ++H + Sbjct: 312 RKKGKPYSNMAMLKVLERMGYG---HITVHGFRSTFRDWVAECTEYADSLAEKALAHAIQ 368 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFIS 383 N AAY + + LE RR M+ WA F R IS Sbjct: 369 NESEAAY-RRGDMLERRRKMMSDWARFCSGERAAIIS 404 >UniRef50_B6C134 Putative uncharacterized protein n=1 Tax=Nitrosococcus oceani AFC27 RepID=B6C134_9GAMM Length = 189 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 49/95 (51%), Positives = 67/95 (70%), Gaps = 3/95 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+G K+WRL+YR+ GK+K L+LGVYPE++L DAR RRDEARKLLAN +DP + + Sbjct: 26 LYLEVAPSGGKWWRLKYRFGGKEKRLSLGVYPEVSLKDARERRDEARKLLANEIDPSENR 85 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTN-KKWSEDHA 92 + K E+ A +F+ VA EW + WSE H Sbjct: 86 RAKKAAREERVANSFEVVAREWFAKHVPNWSESHG 120 >UniRef50_Q7U4G9 Phage integrase family n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U4G9_SYNPX Length = 425 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 72/257 (28%), Positives = 129/257 (50%), Gaps = 14/257 (5%) Query: 127 VEMSGRLEVAARLQQRTTAIMRYAVQSGLI--DYNPAQEMAGAVASCNRQHRPALELKRI 184 +E G + A R+Q+ + YA+ G + + NPA + G + + +H P ++ +++ Sbjct: 173 IEDRGSYDQAFRVQKVLAQALDYAILQGWMRRNQNPATKQKGEESKHDPKHHPHIQWEQV 232 Query: 185 PELLTKI--DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIP 242 PELL I + +G + A++L L+ F+R+ L +W I + ++ IP P Sbjct: 233 PELLEAIHLNRCSGHVQSVMALKLLLMTFLRAGALARLKWKWISRKENLLVIPGT---TP 289 Query: 243 GVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF--IGDHDSHKPMSENTVNS 300 G+K + + + H VPL+ + A+LKQ KQ G +F + + + + + N+ Sbjct: 290 GLKRTKKTEDL--PHHVPLTKEMNALLKQAKQMNGHLPYVFGPVREQSRYPHLDPESPNN 347 Query: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 L+ +GY + HG+R++ ++ E D ++RQM H+ + VR AY K+ L Sbjct: 348 LLKGLGYREVLRA--HGWRSLPLTAGQEVLKAPHDIIQRQMGHLIGDKVRKAY-DKSLML 404 Query: 361 EERRLMLQWWADFLDVN 377 EERR L+ W L N Sbjct: 405 EERRDFLEQWCKLLVKN 421 >UniRef50_A0Q4W3 Phage integrase n=4 Tax=Francisella RepID=A0Q4W3_FRATN Length = 398 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 107/401 (26%), Positives = 183/401 (45%), Gaps = 58/401 (14%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKL---LANGVDPG 57 ++L++ P +K + +Y ++GK + + LG YP IT A R+EAR L G+DP Sbjct: 24 LYLVIKPTNTKSFMYRYYFKGKAQSMGLGGYPTITYKKA---REEARTLNIAKEQGIDPK 80 Query: 58 DKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVL---KSLEDNLFAALGERNIAE 114 + N ++Q K F+ +A +W KK SE + K+L+ ++ +++I Sbjct: 81 VYRANQTIDQDKL--FENIANDWFS--KKKSELRKVTLSGYEKALQSDIIPHFKDKSIDT 136 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIM----RYAVQSGLIDYN---------PA 161 +K R++ A+ + + Q + AI+ YA L ++N A Sbjct: 137 IKLREI-----AIFLQRHCSNSNAKQMKYKAILSGIYNYATLLNLCEHNLMLNDFKHILA 191 Query: 162 QEMAGAVASCNRQHRPALELKRIPELLTKIDSY-TGRPLTRWAIELTLLIFIRSSELRFA 220 + G A N P L+ + LL KIDS G T+ A+++ L+ R + L Sbjct: 192 PKTNGHYAFIN----PILDSDNLSLLLQKIDSLDAGIAATKTALQIAPLLAFRPTLLTIL 247 Query: 221 RWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD 280 RWS + +I IP ++ K + PLS QA ++ ++ Y D Sbjct: 248 RWSYYKPKEAILVIPAKK------------MKANQDFIQPLSRQAQELIDSMRP-YKKSD 294 Query: 281 LIFIGDHDSHKPMSENTVNSALRV-MGYDTKV--EVCGHGFRTMACS---SLVESGLWSR 334 IF + KP+ N + + ++ +G+D K HGFR + + SL W Sbjct: 295 YIFT--NKKGKPIDPNRLRNLIQQDLGFDGKTLPRQTMHGFRHIVSTLLYSLQREYKWQT 352 Query: 335 DAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 +A+E + H RN ++A Y + +++EERR +LQ AD+ D Sbjct: 353 EALELILDHRKRNQIQAIY-NTYQYIEERREILQTLADYFD 392 >UniRef50_Q7MPT5 Site-specific recombinase, phage integrase family n=14 Tax=Gammaproteobacteria RepID=Q7MPT5_VIBVY Length = 434 Score = 97.4 bits (241), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 101/398 (25%), Positives = 175/398 (43%), Gaps = 46/398 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++ V GS YW ++Y ++ LG +P ++LADAR+ RK + +G+DP +K Sbjct: 44 LYFCVRKQGSPYWMIRYTTAKGRREATLGQFPLMSLADARIAAAYFRKEVRDGIDPLLEK 103 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + K+E T ++ +W+ T+ H + ++ +G + IAE+ RD+ Sbjct: 104 Q--KIELPDIETVDQLFHDWYRTDLSRRLKHPKIPYRVYTKDISPVIGIKCIAEVTARDV 161 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM----AGAVASCNRQHR 176 ++ + S R +A + R+A++ L NPA AG V S + Sbjct: 162 REVLERIRESNRPTIANDTLMYMKQLFRHAIKLDLTLNNPAAAFTVDDAGGVESSKDRML 221 Query: 177 PALELKRIPELL-TKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 E+ + T I+S+ GR A L L++ +R SEL A W E+D +W +P Sbjct: 222 SKEEIHYAFSVFHTHINSF-GRD-NYLACCLFLVLGVRKSELCEAMWREMDLTTGVWDLP 279 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP-MS 294 ER SK +PL QA+A +++ +F SH+P M Sbjct: 280 KER------------SKTGVPISIPLPRQAIAWFNELQIRACGSPYVFPARRASHRPHMG 327 Query: 295 ENTVNSAL-RVMGYDT----------------KVEVCGHGFRTMACSSLVESGLWSRDAV 337 +T+N A+ ++ G + V FR++A +SL +G + Sbjct: 328 PDTLNRAISKLFGREPGRKKQPPNKMGKLEHFTVHDLRRTFRSLA-ASLGIAG----NVA 382 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 ER ++H + V Y + ++ EERR+ Q AD ++ Sbjct: 383 ERCLNHKLK-GVEGIY-DRHDYFEERRIAHQTVADVVE 418 >UniRef50_A1U0R6 Phage integrase family protein n=2 Tax=Gammaproteobacteria RepID=A1U0R6_MARAV Length = 432 Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 103/396 (26%), Positives = 175/396 (44%), Gaps = 51/396 (12%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 L + P+GS+ W L+ + ++ + LG YPEI+LA AR + E ++ + +G+DP ++K+ Sbjct: 42 LRITPSGSRQWILRAKVGNRRPDMGLGPYPEISLAQARDKAREMKEKIRSGIDPLEEKRT 101 Query: 63 DK----VEQSKARTFKEVAIEWHGTNKKWSED--HAHRVLKSLEDNLFAALGERNIAELK 116 K EQ TF++ ++ K + + SL LG+ + E+ Sbjct: 102 LKRALLAEQISTLTFQKAMEKYIKMKAKEFRNPRQEKQWTNSLNTYAIPHLGKLPVREID 161 Query: 117 ---TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPA--QEMAGAVAS 170 + +L PI + E A R++ R I+ + G NPA Q V Sbjct: 162 LPHIKQVLDPI----WETKTETANRVRARIENILGWCAIHGYRSAENPARWQGYLDEVYP 217 Query: 171 C-----NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSEL----RFAR 221 R H AL + +PE + + TG A+E +L R++E+ R + Sbjct: 218 SPEKIKKRGHFAALPVDDMPEFMRDLKKRTGTAAR--ALEFLILTASRTNEVIGDKRIGK 275 Query: 222 ----WSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYG 277 W EID +WT+P +R K H VPL+ A+ +LK + + Sbjct: 276 AGVTWQEIDLARKVWTVPADR------------MKSEKIHRVPLTDSAIELLKGMGEG-S 322 Query: 278 AHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAV 337 DLIF G S N + + L+ M + + HGFR+ E ++ + Sbjct: 323 PEDLIFPGPKGGIP--SNNFLTALLKRM----ERPITAHGFRSTFKDWARERTAYADEVS 376 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADF 373 E ++H+ ++ RAAY ++E +++RRLM+ W F Sbjct: 377 ELALAHVNSDATRAAYA-RSELIDKRRLMMADWEQF 411 >UniRef50_C6RGV6 Phage integrase n=3 Tax=Campylobacter RepID=C6RGV6_9PROT Length = 407 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 92/381 (24%), Positives = 172/381 (45%), Gaps = 38/381 (9%) Query: 1 MHLLVHPNGSKYWRLQY--RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + +L+ G K W Y GK+ G+YP+ITLA AR R E + L++ G+ P + Sbjct: 43 LAILITSKGVKGWVFYYIDPVSGKKCSAGFGLYPDITLARARELRAEYKSLISQGISPKE 102 Query: 59 KKKN--DKVEQSKARTFKEVAIEWHGTNK-----KWSEDHAHRVLKSLEDNLFAALGERN 111 KK ++ + +TF +V EW K K + A+R+ +++ +G+R Sbjct: 103 HKKQAREQRQSDHKQTFSKVFNEWLELEKMRVLPKTLQTKANRI----NNHITPLIGDRA 158 Query: 112 IAELKTRDLLAPIKAVEMSGR--LEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA 169 I + ++ + +E G+ + A L Q I YA G +N + Sbjct: 159 IKSINHGEIA---QILEQIGKDTPQTAQILHQLLNNIFHYATTKGYTPFNIISNIQAKAI 215 Query: 170 SCNRQHRPALELKRIPEL---LTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 N++ +L I +L + KI Y TR ++ L I +R + L +W +D Sbjct: 216 IINKEAEHYGKLTEIEDLRAFVNKIYDYPFFLSTRNILKFALHIPLRVAPLTLLKWEYVD 275 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 F+ + TIP E + +K ++PLS + ++IL++ ++ + A+ +F+ Sbjct: 276 FDKKLLTIPRELQ--------KNKNKSLGAFILPLSDEVISILREQEREFKAYPYVFM-- 325 Query: 287 HDSHK-PMSENTVNSALRVMGY---DTKVEVCGHGFRTM---ACSSLVESGLWSRDAVER 339 + S+K P+ ++T ++ + DT + H FR + A + +E S +A+ + Sbjct: 326 NTSYKNPIHKDTPTKTIKEFEFYDRDTGRIITAHSFRGIFKTAVYNYLEQHNTSTEAINK 385 Query: 340 QMSHMARNSVRAAYIHKAEHL 360 + H+ + V +Y KA L Sbjct: 386 ALDHLHGDRVELSYSEKATFL 406 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P39347 Putative prophage P4 integrase n=97 Tax=Enteroba... 515 e-144 UniRef50_Q8VQN9 CP4-like integrase n=87 Tax=Enterobacteriaceae R... 475 e-132 UniRef50_P08320 Integrase n=31 Tax=root RepID=VINT_BPP4 439 e-121 UniRef50_B5F474 Integrase n=26 Tax=Proteobacteria RepID=B5F474_S... 435 e-120 UniRef50_C7SIL5 Integrase B n=113 Tax=Gammaproteobacteria RepID=... 429 e-119 UniRef50_C1M393 Bacteriophage integrase n=1 Tax=Citrobacter sp. ... 427 e-118 UniRef50_Q0P7K9 Bacteriophage integrase n=8 Tax=Enterobacteriace... 423 e-117 UniRef50_C1D8D2 CP4 integrase protein n=12 Tax=Proteobacteria Re... 421 e-116 UniRef50_D0BVL9 Phage integrase n=2 Tax=Acinetobacter RepID=D0BV... 399 e-109 UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4S... 391 e-107 UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio s... 390 e-107 UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX 388 e-106 UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronos... 388 e-106 UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacter... 385 e-105 UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria... 381 e-104 UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp... 378 e-103 UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio... 373 e-102 UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VM... 371 e-101 UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio R... 370 e-101 UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root Rep... 369 e-100 UniRef50_A1VQL7 Phage integrase family protein n=2 Tax=Burkholde... 366 e-100 UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter ... 364 2e-99 UniRef50_Q2T016 Site-specific recombinase, phage integrase famil... 362 2e-98 UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 Re... 360 4e-98 UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfo... 360 6e-98 UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacte... 359 1e-97 UniRef50_B1Y3M2 Integrase family protein n=4 Tax=Proteobacteria ... 359 1e-97 UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepI... 359 1e-97 UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomo... 357 3e-97 UniRef50_C0N6F7 Site-specific recombinase, phage integrase famil... 357 5e-97 UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea... 355 1e-96 UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholde... 355 2e-96 UniRef50_D0W4G5 Site-specific recombinase, phage integrase famil... 355 2e-96 UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteob... 354 3e-96 UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochl... 353 9e-96 UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas flu... 352 1e-95 UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio ... 351 2e-95 UniRef50_B4X5T7 Site-specific recombinase, phage integrase famil... 350 3e-95 UniRef50_A3M8S0 Putative integrase n=1 Tax=Acinetobacter baumann... 350 4e-95 UniRef50_Q2N8A1 Symbiosis island integrase n=12 Tax=Bacteria Rep... 350 7e-95 UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli R... 349 8e-95 UniRef50_C6RSU9 Phage integrase family protein n=3 Tax=Acinetoba... 346 8e-94 UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillu... 344 5e-93 UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTA... 343 6e-93 UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella fer... 343 7e-93 UniRef50_B7I6Z3 Site-specific recombinase, phage integrase famil... 341 3e-92 UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae R... 341 3e-92 UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadacea... 340 5e-92 UniRef50_B7MX56 Integrase from prophage n=96 Tax=Gammaproteobact... 339 8e-92 UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobac... 338 2e-91 UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobac... 337 6e-91 UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteria... 337 6e-91 UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammapro... 336 8e-91 UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobac... 336 9e-91 UniRef50_Q167M4 CP4-like integrase, putative n=40 Tax=Alphaprote... 336 9e-91 UniRef50_Q3SHC8 Probable cp4-like integrase protein n=1 Tax=Thio... 336 9e-91 UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalole... 336 1e-90 UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovoran... 335 2e-90 UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomo... 335 2e-90 UniRef50_A1SRI6 Phage integrase family protein n=2 Tax=Alteromon... 335 2e-90 UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus p... 333 9e-90 UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomon... 332 1e-89 UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacte... 332 1e-89 UniRef50_Q0I4F8 Integrase n=1 Tax=Haemophilus somnus 129PT RepID... 332 1e-89 UniRef50_Q0C1T8 Site-specific recombinase, phage integrase famil... 332 2e-89 UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophil... 331 3e-89 UniRef50_A9I0E1 Phage-related integrase n=5 Tax=Burkholderiales ... 330 4e-89 UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammapro... 330 4e-89 UniRef50_B9NUX0 Site-specific recombinase, phage integrase famil... 330 4e-89 UniRef50_C7HXY0 Integrase family protein n=1 Tax=Thiomonas inter... 330 6e-89 UniRef50_B1Y106 Integrase family protein n=1 Tax=Leptothrix chol... 329 9e-89 UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholde... 329 1e-88 UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobac... 328 2e-88 UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enter... 328 2e-88 UniRef50_C6XEE3 Integrase family protein n=2 Tax=Proteobacteria ... 328 2e-88 UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_A... 327 3e-88 UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV 327 3e-88 UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola... 327 5e-88 UniRef50_Q0I4P6 Integrase n=14 Tax=Pasteurellaceae RepID=Q0I4P6_... 327 7e-88 UniRef50_A1W8P6 Phage integrase family protein n=4 Tax=Comamonad... 326 1e-87 UniRef50_D1B120 Integrase family protein n=1 Tax=Sulfurospirillu... 326 1e-87 UniRef50_B6BKY5 DNA integration/recombination/inversion protein ... 325 2e-87 UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepI... 323 6e-87 UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5... 323 8e-87 UniRef50_Q5R097 Integrase n=2 Tax=Idiomarina RepID=Q5R097_IDILO 322 1e-86 UniRef50_B3GXJ8 Prophage CP4-57 integrase n=4 Tax=Pasteurellacea... 321 3e-86 UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepI... 320 5e-86 UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, pha... 320 5e-86 UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingell... 320 5e-86 UniRef50_A6QCY9 Site-specific recombinase, phage integrase famil... 320 6e-86 UniRef50_Q8W6M6 Putative uncharacterized protein orf1 n=1 Tax=Si... 320 7e-86 UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium ... 318 2e-85 UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacte... 318 2e-85 UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804... 317 7e-85 UniRef50_Q4K6S7 Site-specific recombinase, phage integrase famil... 316 8e-85 UniRef50_A6SWC6 Prophage integrase n=1 Tax=Janthinobacterium sp.... 316 1e-84 UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_P... 316 1e-84 UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombina... 315 1e-84 UniRef50_Q46Z79 Phage integrase n=1 Tax=Ralstonia eutropha JMP13... 313 6e-84 UniRef50_Q4QL03 Prophage CP4-57-like integrase n=11 Tax=Haemophi... 313 8e-84 UniRef50_C6ALW6 Prophage integrase n=2 Tax=Pasteurellaceae RepID... 313 8e-84 UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria R... 312 1e-83 UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZ... 312 1e-83 UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IG... 310 4e-83 UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrop... 310 6e-83 UniRef50_D0J426 Phage integrase n=1 Tax=Comamonas testosteroni C... 310 8e-83 UniRef50_Q1NGR6 Putative phage integrase n=1 Tax=Sphingomonas sp... 310 8e-83 UniRef50_D2MI75 Phage integrase family protein n=1 Tax=Candidatu... 308 2e-82 UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157... 308 2e-82 UniRef50_A5EUW8 Bacteriophage P4-like integrase n=3 Tax=root Rep... 307 4e-82 UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria ... 306 1e-81 UniRef50_A1WP11 Phage integrase family protein n=1 Tax=Vermineph... 305 2e-81 UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria ... 305 3e-81 UniRef50_C8NCE3 Phage integrase family site-specific recombinase... 304 3e-81 UniRef50_A3UDD1 Symbiosis island integrase n=1 Tax=Oceanicaulis ... 303 6e-81 UniRef50_D0SUB2 Predicted protein n=2 Tax=Acinetobacter RepID=D0... 301 3e-80 UniRef50_A4VPC8 Site-specific recombinase, phage integrase famil... 301 3e-80 UniRef50_Q5LS43 Site-specfic recombinase, phage integrase family... 299 1e-79 UniRef50_Q9RM38 Integrase (Fragment) n=56 Tax=Enterobacteriaceae... 298 2e-79 UniRef50_B5J5X2 Site-specific recombinase, phage integrase famil... 298 2e-79 UniRef50_D0D2S4 Site-specfic recombinase, phage integrase family... 298 3e-79 UniRef50_B5JZM6 Site-specfic recombinase, phage integrase family... 297 3e-79 UniRef50_A7H0X5 DNA integration/recombination/inversion protein ... 297 6e-79 UniRef50_A8EUF6 Putative phage integrase n=1 Tax=Arcobacter butz... 297 6e-79 UniRef50_C6V8W5 Integrase n=4 Tax=Enterobacteriaceae RepID=C6V8W... 296 1e-78 UniRef50_A9VZC1 Integrase family protein n=3 Tax=Alphaproteobact... 296 1e-78 UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C... 295 1e-78 UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion p... 295 2e-78 UniRef50_A8EWJ5 Phage integrase n=1 Tax=Arcobacter butzleri RM40... 295 2e-78 UniRef50_Q1QLT5 Phage integrase n=2 Tax=Alphaproteobacteria RepI... 295 2e-78 UniRef50_Q3JXH9 Integrase or site-specific recombinase n=24 Tax=... 294 3e-78 UniRef50_C0VMY9 Integrase n=1 Tax=Acinetobacter sp. ATCC 27244 R... 293 5e-78 UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID... 292 1e-77 UniRef50_D0SVD1 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 292 2e-77 UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJ... 291 3e-77 UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium ... 291 3e-77 UniRef50_Q0BR52 DNA integration/recombination/inversion protein ... 290 5e-77 UniRef50_D0CDZ4 DNA integration/recombination/inversion protein ... 290 9e-77 UniRef50_A3ZAX6 Prophage CP4-like integrase n=2 Tax=Synechococcu... 288 3e-76 UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae ... 288 3e-76 UniRef50_A7JWM6 Possible bacteriophage integrase n=3 Tax=Pasteur... 287 5e-76 UniRef50_A7JZW2 Site-specific recombinase, phage integrase famil... 287 5e-76 UniRef50_B9D1P3 DNA integration/recombination/inversion protein ... 287 6e-76 UniRef50_UPI0000F2F6E4 putative integrase n=1 Tax=Acinetobacter ... 287 7e-76 UniRef50_UPI0000E0F7C9 site-specific recombinase, phage integras... 286 1e-75 UniRef50_Q4FSX1 Probable phage integrase n=1 Tax=Psychrobacter a... 285 2e-75 UniRef50_C6N3S0 Putative phage integrase family protein n=1 Tax=... 285 2e-75 UniRef50_A7H3V7 Putative site-specific recombinase, phage integr... 285 2e-75 UniRef50_C9M6R5 Site-specific recombinase, phage integrase famil... 284 3e-75 UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphil... 284 4e-75 UniRef50_C8Q072 Phage integrase family protein n=1 Tax=Enhydroba... 283 5e-75 UniRef50_C6RLT7 Phage integrase n=2 Tax=Acinetobacter radioresis... 283 6e-75 UniRef50_B7UT12 Predicted P4-family integrase n=26 Tax=Enterobac... 283 8e-75 UniRef50_Q2NDX8 Site-specfic recombinase, phage integrase family... 281 3e-74 UniRef50_C8Q013 Phage integrase n=1 Tax=Enhydrobacter aerosaccus... 280 8e-74 UniRef50_C6RKK3 Phage integrase n=3 Tax=Acinetobacter RepID=C6RK... 280 9e-74 UniRef50_Q12EX0 Phage integrase n=5 Tax=Proteobacteria RepID=Q12... 279 1e-73 UniRef50_Q1QAC1 Phage integrase n=2 Tax=Psychrobacter RepID=Q1QA... 277 4e-73 UniRef50_B8F737 Phage integrase family site specific recombinase... 276 1e-72 UniRef50_C7I5J5 Integrase family protein n=2 Tax=Thiomonas inter... 275 2e-72 UniRef50_Q0I233 Phage integrase n=5 Tax=Pasteurellaceae RepID=Q0... 275 2e-72 UniRef50_D1Y3S1 Site-specific recombinase, phage integrase famil... 275 2e-72 UniRef50_B7UP04 Predicted integrase n=24 Tax=Proteobacteria RepI... 274 4e-72 UniRef50_B7XGJ8 Integrase n=9 Tax=root RepID=B7XGJ8_PSEPU 273 6e-72 UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3... 273 6e-72 UniRef50_UPI0001BCF8EC putative bacteriophage integrase n=1 Tax=... 273 7e-72 UniRef50_Q1N9F3 Putative integrase prophage protein n=1 Tax=Sphi... 273 7e-72 UniRef50_A1W6C2 Phage integrase family protein n=8 Tax=Burkholde... 271 2e-71 UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE4... 271 4e-71 UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella Rep... 271 4e-71 UniRef50_C6UP78 Integrase n=13 Tax=Escherichia coli O157:H7 RepI... 270 6e-71 UniRef50_A5PCI3 Phage integrase n=1 Tax=Erythrobacter sp. SD-21 ... 269 1e-70 UniRef50_C1D7T3 Integrase n=2 Tax=Laribacter hongkongensis HLHK9... 269 1e-70 UniRef50_A4SXW8 Phage integrase family protein n=1 Tax=Polynucle... 269 1e-70 UniRef50_A1U0R6 Phage integrase family protein n=2 Tax=Gammaprot... 269 2e-70 UniRef50_A3M8T8 Phage integrase n=1 Tax=Acinetobacter baumannii ... 268 2e-70 UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EV... 268 3e-70 UniRef50_C8PUK8 Phage integrase family protein n=1 Tax=Enhydroba... 268 4e-70 UniRef50_B0SXU9 Integrase family protein n=6 Tax=Proteobacteria ... 267 4e-70 UniRef50_B0VTB2 Putative prophage integrase n=1 Tax=Acinetobacte... 267 6e-70 UniRef50_C8PFJ4 DNA integration/recombination/inversion protein ... 266 7e-70 UniRef50_B0U0U5 Phage integrase n=1 Tax=Francisella philomiragia... 266 8e-70 UniRef50_B5J8B6 Site-specific recombinase, phage integrase famil... 266 8e-70 UniRef50_C8UI65 Putative integrase n=1 Tax=Escherichia coli O111... 266 8e-70 UniRef50_B3R9I1 Prophage INTEGRASE PROTEIN n=1 Tax=Cupriavidus t... 266 1e-69 UniRef50_A7ZG37 Symbiosis island integrase n=3 Tax=Campylobacter... 266 1e-69 UniRef50_A9HQA6 Phage-related integrase n=5 Tax=Rhodobacteraceae... 265 2e-69 UniRef50_D2M358 Integrase family protein n=1 Tax=Rhodopseudomona... 263 6e-69 UniRef50_C7JAN4 Phage integrase n=17 Tax=Acetobacteraceae RepID=... 262 1e-68 UniRef50_B5J7B6 Site-specific recombinase, phage integrase famil... 262 2e-68 UniRef50_A6VNS1 Phage integrase family protein n=7 Tax=Pasteurel... 261 2e-68 UniRef50_C7JFF4 Phage integrase n=8 Tax=Acetobacter pasteurianus... 261 3e-68 UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium ML... 259 1e-67 UniRef50_A3JW30 Site-specfic recombinase, phage integrase family... 259 1e-67 UniRef50_B0T5C0 Integrase family protein n=31 Tax=Proteobacteria... 259 2e-67 UniRef50_D1D4Y4 Site-specific recombinase n=19 Tax=Neisseria Rep... 259 2e-67 UniRef50_Q3J2T0 Putative P4-family integrase n=5 Tax=Rhodobacter... 258 2e-67 UniRef50_Q92LG2 Phage-related integrase n=1 Tax=Sinorhizobium me... 258 2e-67 UniRef50_C6XJP3 Integrase family protein n=1 Tax=Hirschia baltic... 258 3e-67 UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanell... 256 7e-67 UniRef50_D1Y2Y2 DNA integration/recombination/inversion protein ... 256 8e-67 UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1... 256 1e-66 UniRef50_A0Q3W3 Phage integrase n=8 Tax=Francisella RepID=A0Q3W3... 256 1e-66 UniRef50_Q98MP8 Probable prophage integrase n=2 Tax=Proteobacter... 255 2e-66 UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobac... 254 4e-66 UniRef50_A4A7S2 Phage-related integrase n=1 Tax=Congregibacter l... 254 4e-66 UniRef50_A6Q4N1 Site-specific recombinase, phage integrase famil... 254 4e-66 UniRef50_C5F036 30S ribosomal protein S15 n=3 Tax=Campylobactera... 253 1e-65 UniRef50_Q21D10 Phage integrase n=3 Tax=Alphaproteobacteria RepI... 251 2e-65 UniRef50_B4SNF6 Integrase family protein n=2 Tax=Proteobacteria ... 251 3e-65 UniRef50_B9R123 Site-specific recombinase, phage integrase famil... 251 3e-65 UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP... 250 8e-65 UniRef50_B4WZP4 Site-specific recombinase, phage integrase famil... 249 1e-64 UniRef50_Q7MPT5 Site-specific recombinase, phage integrase famil... 248 2e-64 UniRef50_Q1GUV7 Phage integrase n=1 Tax=Sphingopyxis alaskensis ... 248 2e-64 UniRef50_A2SG96 Integrase or site-specific recombinase n=19 Tax=... 248 3e-64 UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas put... 247 6e-64 UniRef50_A5ELC2 Putative prophage integrase n=2 Tax=Bradyrhizobi... 247 7e-64 UniRef50_Q8DF52 Phage integrase n=1 Tax=Vibrio vulnificus RepID=... 246 7e-64 UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio... 246 8e-64 UniRef50_Q31FR8 Tyrosine recombinase n=1 Tax=Thiomicrospira crun... 246 8e-64 UniRef50_A5WEP7 Phage integrase family protein n=1 Tax=Psychroba... 246 9e-64 UniRef50_B1JLR8 Integrase family protein n=1 Tax=Yersinia pseudo... 246 1e-63 UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacteriu... 245 2e-63 UniRef50_B8GZR1 Bacteriophage P4 integrase n=3 Tax=Proteobacteri... 245 3e-63 UniRef50_B3R3M6 Prophage integrase n=4 Tax=Bacteria RepID=B3R3M6... 245 3e-63 UniRef50_D0SVD2 Predicted protein n=2 Tax=Acinetobacter RepID=D0... 244 4e-63 UniRef50_D1AZM1 Integrase family protein n=1 Tax=Sulfurospirillu... 243 6e-63 UniRef50_A6U968 Phage integrase family protein n=2 Tax=Rhizobial... 243 6e-63 UniRef50_B8IIS8 Integrase family protein n=9 Tax=Alphaproteobact... 243 7e-63 UniRef50_C5V760 Integrase family protein n=1 Tax=Gallionella fer... 243 7e-63 UniRef50_B0UGI0 Integrase family protein n=1 Tax=Methylobacteriu... 243 8e-63 UniRef50_D2LD60 Integrase family protein n=1 Tax=Rhodomicrobium ... 243 9e-63 UniRef50_B2TTV9 Site-specific recombinase, phage integrase famil... 243 1e-62 UniRef50_B6JEM3 Phage integrase n=1 Tax=Oligotropha carboxidovor... 242 1e-62 UniRef50_B2U8E1 Integrase family protein n=9 Tax=Proteobacteria ... 241 2e-62 UniRef50_B9KC61 Site-specific recombinase, phage integrase famil... 240 8e-62 UniRef50_Q1YTS1 Putative phage integrase n=1 Tax=gamma proteobac... 240 8e-62 UniRef50_C3MAV8 DNA integration/recombination/invertion protein ... 240 8e-62 UniRef50_B3AX37 Site-specific recombinase, phage integrase famil... 239 1e-61 UniRef50_A3VAJ4 Site-specific recombinase, phage integrase famil... 239 2e-61 UniRef50_A1WQF8 Phage integrase family protein n=1 Tax=Vermineph... 238 2e-61 UniRef50_A1AQ50 Phage integrase family protein n=1 Tax=Pelobacte... 238 2e-61 UniRef50_A5UG79 Prophage integrase n=1 Tax=Haemophilus influenza... 238 2e-61 UniRef50_A7MTK6 Putative uncharacterized protein n=1 Tax=Vibrio ... 238 3e-61 UniRef50_D1UFB2 Integrase family protein n=1 Tax=Burkholderia sp... 237 5e-61 UniRef50_Q7V8P5 Phage integrase n=3 Tax=Cyanobacteria RepID=Q7V8... 236 1e-60 UniRef50_UPI00019779C7 integrase n=1 Tax=Helicobacter cinaedi CC... 235 3e-60 UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultu... 234 4e-60 UniRef50_A3WKP7 Site-specific recombinase, phage integrase famil... 234 5e-60 Sequences not found previously or not previously below threshold: >UniRef50_P39347 Putative prophage P4 integrase n=97 Tax=Enterobacteriaceae RepID=INTB_ECOLI Length = 396 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 396/396 (100%), Positives = 396/396 (100%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK Sbjct: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL Sbjct: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE Sbjct: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP Sbjct: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS Sbjct: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 Query: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL Sbjct: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 Query: 361 EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ 396 EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ Sbjct: 361 EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ 396 >UniRef50_Q8VQN9 CP4-like integrase n=87 Tax=Enterobacteriaceae RepID=Q8VQN9_ECOLX Length = 421 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 264/396 (66%), Positives = 325/396 (82%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M LLVHPNGS+YWRL+YR GK+K LALGVYPE++L++AR +RDEARKL++ G+DP ++K Sbjct: 26 MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + KV +F+ +A WH +NK+W++ H+ +VLKSLE ++F +G R+I L T DL Sbjct: 86 RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL 145 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 L P++A E E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+ + RQHRPAL+ Sbjct: 146 LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD 205 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 L R+PELL++I+SY G+P+TR A+ L LL+FIRSSELR+ARWSEID + ++WTIP ER+P Sbjct: 206 LSRLPELLSRINSYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERKP 265 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 +PGVK SHRGSKMRT HLVPLS QA+AIL +++ + G + LIF G HD KP+SENTVN Sbjct: 266 LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK 325 Query: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 ALRVMGYDT EVCGHGFR MACS+L+ESGLWSRDA ERQMSH RN VRAAYIHKAEHL Sbjct: 326 ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAGERQMSHQERNGVRAAYIHKAEHL 385 Query: 361 EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ 396 EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ Sbjct: 386 EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ 421 >UniRef50_P08320 Integrase n=31 Tax=root RepID=VINT_BPP4 Length = 439 Score = 439 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 227/385 (58%), Positives = 290/385 (75%), Gaps = 2/385 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V GSKYWR++YR K+ LA GV+P +TLA AR +RDEA+KLL G+DP Sbjct: 30 LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKV 89 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 +K + E S A TF+ +A EWH +NK+WSEDH RVL+ LE +F +G +I +LKT Sbjct: 90 VQKEARAENSGAYTFEAIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS 149 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ+ ID NPA +MAGA+++ +H PA Sbjct: 150 HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA 209 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L R PE L ++ +Y GR +TR A++L+LL F+RSSELRFARW E DF+ S+W IP +R Sbjct: 210 LPSSRFPEFLARLAAYRGRVMTRIAVKLSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR 269 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 E I GV++S+RG KM+ H+VPLS QA+ +L Q+KQ G +L+F GDHD+ K MSENTV Sbjct: 270 EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLNQLKQISGDKELLFPGDHDATKVMSENTV 329 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 NSALR MGYDTK EVCGHGFRTMA +L ESGLWS DA+ERQ+SH RN+VRAAYIH +E Sbjct: 330 NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE 389 Query: 359 HLEERRLMLQWWADFLDVNRERFIS 383 HL+ERRLM+QWWAD+LD+NR ++IS Sbjct: 390 HLDERRLMMQWWADYLDMNRNKYIS 414 >UniRef50_B5F474 Integrase n=26 Tax=Proteobacteria RepID=B5F474_SALA4 Length = 449 Score = 435 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 220/394 (55%), Positives = 290/394 (73%), Gaps = 2/394 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V P GSKYWR++YR K+ LA GVYP ITLA+AR +RD A+KLL+ G+DP Sbjct: 55 LYLEVSPKGSKYWRMKYRRPSDKKEDRLAFGVYPTITLAEARAKRDAAKKLLSQGIDPKV 114 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 ++K + E A F+ +A +WH +N WSEDH+HRVL +LE +F ++G+ + L+T Sbjct: 115 EQKGAQAEIEGAYLFETIARQWHASNLTWSEDHSHRVLLTLEQYIFPSIGQIDARTLRTS 174 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 LL PIKAV+ +G+ +VA RL QR AIMR+ VQ+ L++ NPA +MAGA+ S H PA Sbjct: 175 QLLNPIKAVDTAGKHDVAQRLMQRVNAIMRFGVQNDLLESNPASDMAGALLSVKATHHPA 234 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L KRIPE L ++ Y GR +TR A+ELTLL FIRSSE+RFARWSE++FE S WTIP R Sbjct: 235 LPPKRIPEFLERLSRYKGRLMTRLAVELTLLTFIRSSEMRFARWSEVNFERSEWTIPGIR 294 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 +PIPGVKHS RG KM+T H+VPLS QA I K++ G ++IF DHD K MSENTV Sbjct: 295 KPIPGVKHSERGMKMKTEHIVPLSKQAFDIFKRLHALSGKGEVIFPSDHDPKKVMSENTV 354 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 NSALRVMGYDTK EVCGHGFRTMA +L ES LW+ DA+ERQ+SH+ R +V+ +Y+H +E Sbjct: 355 NSALRVMGYDTKTEVCGHGFRTMARGALSESKLWNDDAIERQLSHVERKNVKGSYMHTSE 414 Query: 359 HLEERRLMLQWWADFLDVNRERFISPFEYAKINN 392 +LEERRLMLQWWAD++D N+ I+P+++A+++ Sbjct: 415 YLEERRLMLQWWADYIDANKNGSITPYDFARVHG 448 >UniRef50_C7SIL5 Integrase B n=113 Tax=Gammaproteobacteria RepID=C7SIL5_ECOLX Length = 420 Score = 429 bits (1104), Expect = e-119, Method: Composition-based stats. Identities = 212/390 (54%), Positives = 287/390 (73%), Gaps = 1/390 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV P GS++W L+YR GK+ +ALG YP ++L+DAR +R+ RK+LA ++P ++ Sbjct: 26 LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 ++ ++ + FK VA+ WH +N+KWS++ A R+L SL +++F +G ++ELK R Sbjct: 86 AAERGSRTPDKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF 145 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + +K +E G LEVA+R +Q + IMR+AV GLID NPA + G R+H PAL Sbjct: 146 IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPALP 205 Query: 181 LKRIPELLTKIDSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 L+R+PELL +I +Y GR LTR A+ L L +FIRSSELRFARWSEIDF +WTIP RE Sbjct: 206 LERLPELLERIGAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 PI GV++S RG+KMR +H+VPLS Q++AILKQIK G ++LIF GDH+ +KPM ENTVN Sbjct: 266 PIIGVRYSGRGAKMRMSHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN 325 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 ALRVMGYDTK ++CGHGFR MACS+L+ESGLW++DAVERQMSH RN+VR AYIHKAEH Sbjct: 326 KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH 385 Query: 360 LEERRLMLQWWADFLDVNRERFISPFEYAK 389 LE R+ M+QWW+D+L+ RE + P+ K Sbjct: 386 LEARKAMMQWWSDYLEACRESYAPPYTIGK 415 >UniRef50_C1M393 Bacteriophage integrase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M393_9ENTR Length = 420 Score = 427 bits (1099), Expect = e-118, Method: Composition-based stats. Identities = 195/393 (49%), Positives = 284/393 (72%), Gaps = 1/393 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L++ +GS+ W ++R+ GKQ +A G YP+IT+ADAR +RD ARKLL +G+ P + + Sbjct: 26 LYLVISNSGSRLWYFRFRFNGKQNRIAFGPYPQITIADARRKRDAARKLLTSGISPSEHR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K++K SK RTF+ +A+ WH + +WSE HA+++L L+ +F +G+++IA+++T Sbjct: 86 KSEKAASSKTRTFQHIALAWHSSCLNRWSEGHANKILVCLQRYVFPYVGKKDIAKIETFH 145 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 L IK V G +VA+R++Q T IMR++VQ GLI YNPA ++ + QH PAL Sbjct: 146 LAELIKEVNNKGVHDVASRIRQYLTKIMRHSVQQGLIHYNPALDLEDIITPVVVQHYPAL 205 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 L+ + ELL KID Y G+ L R A+EL+L +F+R+SELRFARW E + + IWTIP +R+ Sbjct: 206 PLRSLSELLIKIDDYKGQELIRLALELSLHVFLRASELRFARWDEFNMKIHIWTIPAKRK 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 + GV+ S RGSKM+ HLVPLS QA+ IL++IK+ G + +F + ++PMSENT+N Sbjct: 266 AVDGVRFSDRGSKMKEEHLVPLSDQAMKILERIKKISGESEFVFHSIRNLNRPMSENTIN 325 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 ALRV+GY TK +VC HGFRTMACS+L ESG WS+DA+ERQMSH RN+VRAAY+HKAE+ Sbjct: 326 KALRVIGYCTKNDVCAHGFRTMACSALNESGKWSKDAIERQMSHKDRNNVRAAYLHKAEY 385 Query: 360 LEERRLMLQWWADFLDVNRERFISPFEYAKINN 392 LEER M+QWW+D+L RE++++P+ +A+ + Sbjct: 386 LEERFEMMQWWSDYLSTTREKYVAPYIFARWPD 418 >UniRef50_Q0P7K9 Bacteriophage integrase n=8 Tax=Enterobacteriaceae RepID=Q0P7K9_ECOLX Length = 423 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 210/392 (53%), Positives = 288/392 (73%), Gaps = 1/392 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV P GS+ W L+YR GK+ +ALG YP ++L+DAR +R+ RK+LA ++P ++ Sbjct: 26 LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 ++ + + + FK VA+EWH + KKWS++ A RVL L ++F +G + ELK+R Sbjct: 86 AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF 145 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + +K +E G LEVA+R +Q + IMRYAV GLI+ NPA + G AS R+H P L Sbjct: 146 IELLKGIEEKGLLEVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTLP 205 Query: 181 LKRIPELLTKIDSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 L+R+PELL +IDSY GR LTR A+ LTL +FIRSSELR+ARW+EI+F IWTIP RE Sbjct: 206 LERLPELLERIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 I GV++S RG+KMRT H+VPLS Q ++ILK+IK+ G ++L+F G HD +KPMSENT+N Sbjct: 266 AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN 325 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 ALR MGY+TK ++CGHGFR MACS+L+ESGLWS+DAVERQMSH RN+VR AYIHKAEH Sbjct: 326 KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH 385 Query: 360 LEERRLMLQWWADFLDVNRERFISPFEYAKIN 391 +E R M+QWW+D+LD+ E ++ P+ +++ N Sbjct: 386 MEARMDMMQWWSDYLDMCSEIWVPPYIWSQQN 417 >UniRef50_C1D8D2 CP4 integrase protein n=12 Tax=Proteobacteria RepID=C1D8D2_LARHH Length = 452 Score = 421 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 216/409 (52%), Positives = 276/409 (67%), Gaps = 20/409 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE----------------ITLADARVRRD 44 ++LL++PNGSKYWR+ YR GKQK LA+GVY + ++LADAR+ D Sbjct: 30 LYLLINPNGSKYWRMNYRINGKQKTLAIGVYCQFALVDDKGKARAEQVIMSLADARLHCD 89 Query: 45 EARKLLANGVDPGDKKKNDKVEQS--KARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLED 101 AR +LA G+DP + K+ K + +F VA EWH KW HA VL LE Sbjct: 90 AARAMLAKGIDPFETKQEAKKAANGLSPGSFAYVAREWHAKMANKWVPSHAANVLGRLER 149 Query: 102 NLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPA 161 +F +G AE++T+ +L ++ VE L+V +RL+Q I RYAVQ+G ID+NP Sbjct: 150 YIFPDIGHMPFAEIRTKHMLMALRKVEAKNILDVTSRLRQYLKQIGRYAVQTGRIDFNPG 209 Query: 162 QEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFAR 221 ++ GA+ + HRPAL L R+PELL +ID+ RPLTR AI LTLL F+RSSELRFAR Sbjct: 210 NDLDGALQTRRTVHRPALSLNRLPELLERIDAAKLRPLTRAAISLTLLTFVRSSELRFAR 269 Query: 222 WSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDL 281 W EIDF+ ++W IP ERE +PGVK S RG+KMRT HLVPL QALA+ +++ G +L Sbjct: 270 WEEIDFDRAVWLIPGEREALPGVKFSSRGAKMRTPHLVPLCQQALALFREVHAITGRFEL 329 Query: 282 IFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQM 341 +F GDHD +KPMSE+TVN AL+ MGYDTK EVCGHGFR MACS+L ESG +S +A+ERQM Sbjct: 330 VFAGDHDPYKPMSESTVNIALKRMGYDTKTEVCGHGFRAMACSALSESGQFSIEAIERQM 389 Query: 342 SHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER-FISPFEYAK 389 SH R+SVRAAY HKAE L ERR M+ WWADFLD RE +I P E+ + Sbjct: 390 SHQERDSVRAAYTHKAEFLTERRDMMGWWADFLDAQREGTYIEPLEFKR 438 >UniRef50_D0BVL9 Phage integrase n=2 Tax=Acinetobacter RepID=D0BVL9_9GAMM Length = 441 Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 183/392 (46%), Positives = 257/392 (65%), Gaps = 5/392 (1%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 + L + +GSK WR +Y R GK ++ LG +P ++L AR +R E LLANG+DP + Sbjct: 31 LILFIRKSGSKVWRFKYKRANGKDGLMTLGNFPALSLKTARDKRRELETLLANGIDPIEY 90 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNK---KWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 + K + F+ +A EWH K +W + A R LK++E+ +F LG++ I +K Sbjct: 91 SEIQKAKLDNKYNFESIAREWHTAYKNTGRWGTETAERALKNMEEYVFPKLGKKPIDAIK 150 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA-SCNRQH 175 ++L+ IK++E G EV + +QR T+I +A+ G I+ NPA + S +H Sbjct: 151 PKELIQVIKSIEDLGYTEVVKKTRQRLTSIFAFAMSKGFIESNPAYGLQDIFILSKKTKH 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 P L L+R+PEL K+ S TG P+TR +E L F RSSE+RFARW E DFE +IWTIP Sbjct: 211 HPQLPLERLPELQAKLASDTGHPITRLCVEFALHTFARSSEIRFARWKEFDFENAIWTIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 P R+ + G K+SHRG+KM+T HL+PLS QALAI+K+I ++ G +F + D H MSE Sbjct: 271 PTRDFVEGYKYSHRGAKMKTPHLIPLSNQALAIIKEIYKYSGHTQNVFPKNGDPHGFMSE 330 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 +T+N LR +GYDT EVCGHGFR MAC++L++S L+ +DAVE+QMSH RN+VR AY H Sbjct: 331 STINKTLRRLGYDTNTEVCGHGFRGMACAALIQSKLFQKDAVEKQMSHQERNNVRLAYTH 390 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFISPFEY 387 KAE LEER+ ML WW+ +LDV +E ISP++Y Sbjct: 391 KAEFLEERKTMLNWWSSYLDVTKETSISPYDY 422 >UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4SSF4_AERS4 Length = 404 Score = 391 bits (1003), Expect = e-107, Method: Composition-based stats. Identities = 172/394 (43%), Positives = 243/394 (61%), Gaps = 20/394 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV+ +G KYW+L+YR+ GK+K LALGVYPE++L +AR +RDEAR+++A G+DPG + Sbjct: 28 LFLLVNKSG-KYWKLKYRHGGKEKKLALGVYPEVSLREARAKRDEARRVIAEGIDPGLVR 86 Query: 61 KNDKVEQS--KARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K KV + + +A EWH + WS HA RV++SLE ++F LG I EL Sbjct: 87 KQSKVASRLVSENSLEVLAREWHQSQFALWSPGHATRVIESLEVDVFPDLGLVPITELTA 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L ++ VE G E A R+ QR +AIMRYA+Q+G YNPAQ++ GA+ + ++HRP Sbjct: 147 PMILEALRKVEKRGATETAGRILQRVSAIMRYAIQTGRASYNPAQDLRGALKATKQEHRP 206 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 AL +PE ++++ P TR A+ L +L R E+RFARW E D E + W IP Sbjct: 207 ALPRSELPEFFRRLEAEPLNPATRLALHLLMLTMTRPGEVRFARWDEFDMERAEWRIPAA 266 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R KMRT HLVPLS QALA+L ++ Q G +L+F + PMSENT Sbjct: 267 R------------MKMRTEHLVPLSRQALAVLDELHQLTGHCELLFPSERKLTNPMSENT 314 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 ++ A+ MGY K HGFR +A ++L E G + D +ERQ++H RN VRAAY H+A Sbjct: 315 LSYAMGRMGY--KGIATPHGFRALASTTLNEEG-FDPDVIERQLAHAERNKVRAAY-HRA 370 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFEYAKIN 391 E+L++RR +LQW ADF D R + P + ++ Sbjct: 371 EYLDDRRKLLQWLADFYDSQRGSNVLPVNFNRVG 404 >UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L516_9DELT Length = 417 Score = 390 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 162/396 (40%), Positives = 235/396 (59%), Gaps = 26/396 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P G K WR +Y ++GK+K+LALG +P++ L AR RRDEAR L+A GVDP +K+ Sbjct: 31 LFLQVTPTGGKLWRFKYLFDGKEKLLALGKWPDVGLKMARQRRDEARALVAQGVDPSEKR 90 Query: 61 KNDK-----VEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 K D+ A TF VA +WH K WSE HA ++L +E +LF G I Sbjct: 91 KQDRADAEGQAVENANTFAVVARDWHAKQVKVWSEGHAAKILARMEQHLFPVFGNIPITT 150 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 L+ +L ++ +E G E A RL+Q A+ +A+ +G+ + N ++ GA+A C Sbjct: 151 LRAPAILPTLRDIEDKGNHETAKRLRQYCEAVFTFAISTGIAERNVGADLRGALAPCRAT 210 Query: 175 HRPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS--- 230 +RPA ++ K + +LL ID Y G P+T A+ L L+F+R ELR A WSEID +A+ Sbjct: 211 NRPAIIDPKGVAQLLRAIDGYQGSPVTVAALRLAPLVFVRPGELRQAEWSEIDLDAADGP 270 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 W+IP E+ KMR H+VPLS QA+ I+ +I G +F + Sbjct: 271 RWSIPAEK------------MKMRRDHVVPLSKQAVDIITEIYSLTGQDRYLFPCNRTKG 318 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 + MS +N+ALR MGY+ + E+C HGFR MA + L E G W+ D +ERQ++H RNS+R Sbjct: 319 RCMSNMALNAALRRMGYE-QGEMCAHGFRAMASTLLNELG-WNSDLIERQLAHAERNSIR 376 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDVNRER-FISPF 385 AAY ++AE+L ERR M+Q WAD+LD+ + ++P Sbjct: 377 AAY-NRAEYLPERRRMMQAWADYLDMLKAGAKVTPL 411 >UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX Length = 394 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 156/383 (40%), Positives = 242/383 (63%), Gaps = 19/383 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M+LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K Sbjct: 26 MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK 85 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K+ Q + TF+ +A EWH + +WS + ++ + E ++F +G+R IAE+K Sbjct: 86 KEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LL ++ +E G LE +++QR + RYA+ +G DYNPA ++A A+A+ + H P Sbjct: 146 MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L +P L + YTG +T+ A ++ +L +R+ ELRFARW +IDFE +W IP E Sbjct: 206 FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 KM+ H+VPLS Q + + KQ++ H L+FIG +D KP+S+ + Sbjct: 266 ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES 313 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +N + ++GY K + GHGFR + L E G ++ +E Q++H+ +NS+R Y H A Sbjct: 314 INQVIELLGY--KGRLTGHGFRHTMSTILHEQG-FNSAWIEMQLAHVDKNSIRGTYNH-A 369 Query: 358 EHLEERRLMLQWWADFLDVNRER 380 +L+ RR M+QW+AD++D R Sbjct: 370 LYLDGRREMMQWYADYIDSLSSR 392 >UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR55_9DELT Length = 401 Score = 388 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 155/394 (39%), Positives = 232/394 (58%), Gaps = 23/394 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M+L V P G K WR +YR+ GK K+LALG YP+++LA AR + AR+ +A G DP K Sbjct: 26 MYLEVTPAGGKLWRFKYRFNGKNKLLALGKYPDVSLAKAREKLSIARQQIAEGKDPAYIK 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K +K E+ TFK + EW K W+ HA +V + LE ++ L +R I E+ R+ Sbjct: 86 KIEKAEKEN--TFKAITDEWWRAKKSTWTPGHAEKVYRRLEIDVLPYLKDRPIKEITARE 143 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA- 178 +L +K E G + A RL Q + I +A+ SG ++NPA +++ A+ + + +RPA Sbjct: 144 ILEVLKKAEARGVTDTAYRLAQMCSNIFIFALASGRAEHNPAADISKALTAHPKTNRPAI 203 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 E I ELL ID +TG A+++ +L+F+R ELR A W+EI+F+ ++W +P +R Sbjct: 204 TEPDEIKELLLAIDGFTGSYTVLCALKIAILVFVRPGELRQASWAEINFDEALWYVPSQR 263 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 KM+ HLVPLS QA+ ILK I GA +F + +PMSENT+ Sbjct: 264 ------------MKMKREHLVPLSGQAVKILKDIHPLTGAGHYVFPSIRTNSRPMSENTL 311 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 N+ALR +GY + ++C HGFRTMA + L E G W D +E Q++H+ +N +R Y ++AE Sbjct: 312 NAALRRLGY-PQEKLCAHGFRTMASTRLHEMG-WPSDIIEFQLAHVDQNKIRGIY-NRAE 368 Query: 359 HLEERRLMLQWWADFLDVNRERFISPFEYAKINN 392 +L++R M+Q WAD+LD + + K NN Sbjct: 369 YLDQRTKMMQAWADYLDDLKTGKTA----KKFNN 398 >UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacteria RepID=B4RZR6_ALTMD Length = 412 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 167/395 (42%), Positives = 235/395 (59%), Gaps = 23/395 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV NGSKYWRL+YR++GKQK LA+GVYPE++L DAR EAR+ L + +DP K Sbjct: 26 LRLLVKKNGSKYWRLKYRFQGKQKTLAIGVYPEVSLKDAREAVSEARRQLRDDIDPSAIK 85 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K S+ F A W K +WSE HA R+ L DN LG+R I E+ Sbjct: 86 QEKKHLSSVSEIELFNTQARLWWNKQKGQWSEGHAARIWTRLNDNALKTLGKRPIGEITP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +D++ ++ +E G L+VA R+ Q + R+AVQ+G++ +NPA E++G + HR Sbjct: 146 QDIIRTVQKIETRGALDVAQRVLQDIRRVCRFAVQTGVLLHNPASELSGILEKRKTSHRA 205 Query: 178 ALELKRIPELLTKIDSYT--GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 +L + +P+ L +D+Y GR LT+ AIEL + F+R EL ARW E D E +W IP Sbjct: 206 SLPREELPQFLRDLDAYHQQGRLLTKLAIELLVHTFVRPGELAGARWDEFDLEEKLWRIP 265 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R KM++ H+VPLS QALA+L+ K F + +F + D K MS+ Sbjct: 266 AHR------------MKMKSDHIVPLSRQALAVLENTKPFSARFEFVFPSERDRFKQMSD 313 Query: 296 NTVNSALRVMGYD----TKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 NT+ A+ MGYD K + HGFR A S L E+G ++ DA+ERQ+SHM RN VRA Sbjct: 314 NTMRMAIFRMGYDGETKGKSKANPHGFRATASSILNETG-FNPDAIERQLSHMERNGVRA 372 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRER-FISPF 385 AY H A +LEER+ M+QWW+D+LD + ++P Sbjct: 373 AYTHHARYLEERKEMMQWWSDYLDSLKNNGNVTPI 407 >UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria RepID=A4JAY4_BURVG Length = 405 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 152/391 (38%), Positives = 224/391 (57%), Gaps = 19/391 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + +GSK WRL+YR+ GK+ +L G YP +LADAR RRDEA++LLA G +P ++ Sbjct: 30 LYLDLRSSGSKKWRLKYRFNGKENLLTFGDYPATSLADARSRRDEAKRLLAEGKNPAFER 89 Query: 61 KNDKVEQS--KARTFKEVAIEWH-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 +K ++ TF+ VA+EW+ WS HA+RV K L+ +F +G+R I+ + Sbjct: 90 DVEKQTRAIAAQNTFEAVALEWYEAQQATWSASHANRVKKQLDREVFPLIGQRPISSIGA 149 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 DLLA ++ +E E A + Q + RYAV + + +P+ ++ GA+ + +H Sbjct: 150 PDLLAVVRRIEGREAFETARKTLQTCGQVFRYAVATSRAERDPSPDLRGALKAVPVKHMA 209 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + +PELL I SY G P TR A+ L F+R+ ELR A W+EID E W IP E Sbjct: 210 RVGESELPELLRSIASYEGEPETRLALRFLALTFVRTIELRQAEWTEIDLERREWRIPAE 269 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 + KMR H+VPL+ QA+A+L +++ G +F + MSENT Sbjct: 270 K------------MKMRRVHIVPLAEQAIALLSELRALTGHRRWLFPNSRRPLQQMSENT 317 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + AL MGY + + GHGFR +A + L E G ++ D +ERQ++H ++ VRAAY H A Sbjct: 318 ILYALYRMGY--RSRMTGHGFRGLASTILNEKG-FNSDWIERQLAHSEQDGVRAAYNH-A 373 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFEYA 388 E+L ER M+QWWAD+LD I P A Sbjct: 374 EYLSERHRMMQWWADYLDKQSGAQIIPIAAA 404 >UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MJ08_9PROT Length = 418 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 157/388 (40%), Positives = 230/388 (59%), Gaps = 19/388 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M++ V PNG+KYWR+ YR+ KQK LALGVYP++TLADAR RR+EARKLLANG DPG K Sbjct: 26 MYIEVKPNGAKYWRMAYRFADKQKTLALGVYPDVTLADARDRRNEARKLLANGADPGAVK 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 ++ K + + + +F+ +A E+H WS +HA +K+LE +F G I+E+ Sbjct: 86 QSQKKQAKIAASNSFELIAREFHSLKTPMWSTNHAADWIKTLEREIFPKFGNYPISEIDA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-QHR 176 +L I+A+E EVAAR+ QR A+ YA+ +G +NPA E+ GA+A + +H Sbjct: 146 PAVLDAIRAIESRDAHEVAARVLQRVRAVCAYAIATGRARHNPASEIKGALAPQPKIKHF 205 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 AL K +P+ L + +Y PLT++A L +L F+R+ E+R A+W E D +A +W IP Sbjct: 206 AALTEKELPDFLRAVAAYPCYPLTKYATALLMLTFVRTGEVRGAKWCEFDLDAKLWKIPA 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER K R H+VPL+ QA+ IL ++ G + +F + K +SEN Sbjct: 266 ER------------MKSREPHIVPLAKQAIEILGELHPLTGHGEHLFPNRTGNGKVISEN 313 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 TV + +GY K + GHGFRT+A + L G+ D +E Q++H N+ RAAY ++ Sbjct: 314 TVLKVIERLGY--KGRMTGHGFRTIASTYLNGVGMIRPDVIEAQLAHTEANATRAAY-NR 370 Query: 357 AEHLEERRLMLQWWADFLDVNRERFISP 384 A ++E R M+Q+WAD LD P Sbjct: 371 ANYMEYRAAMMQFWADTLDAMEAGITLP 398 >UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2J0_9DELT Length = 420 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 138/396 (34%), Positives = 222/396 (56%), Gaps = 15/396 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGK----QKMLALGVYPEITLADARVRRDEARKLLANGVDP 56 ++L V P+G K+WR +YR+ G+ +K L+LG YP + L +AR +RDE R+ +A G+DP Sbjct: 26 LYLEVAPSGGKWWRFKYRFPGQGKIQEKRLSLGTYPGVGLKEARAKRDEMRRQIAQGIDP 85 Query: 57 GDKKKNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + +++ + + A +F+ VA WH N W+ H+ R+++ LE ++F LG R + ++ Sbjct: 86 ANLRRSTRGSGALAGSFEAVARLWHRNNSTDWAPSHSTRLIRRLEAHVFPYLGNRPVGDI 145 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 DL+ ++ ++ SG E A R+Q + RYAVQ G +Y+P+ + G + ++ Sbjct: 146 TAPDLMNVLERIKNSGHTETARRIQTICGQVFRYAVQKGFAEYDPSSALKGCLGKTTAKN 205 Query: 176 RPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 E + LL ID Y G + R A++L L F+RS ELR ARW E D W I Sbjct: 206 MATITEPAEVGRLLQAIDEYPGTQVVRCALQLAPLFFVRSGELRNARWDEFDLVNREWKI 265 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAIL-KQIKQFYGAHDLIFIGDHDSHKPM 293 P ER + + R + + H+VPL+TQA+ IL ++++ G L+F G + + Sbjct: 266 PVERMKM--RQDEKRARQGQVGHIVPLATQAVKILEEELRPLTGRCALVFPGLRSRDRAI 323 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S+ T+ +ALR MGY E+ HG R MA + L G + +ERQ++H RN +R Y Sbjct: 324 SDATLTNALRRMGYTGD-EMTIHGLRHMASTLLHGLG-FQSLVIERQLAHKDRNRIRGVY 381 Query: 354 IHKAEHLEERRLMLQWWADFLDVN---RERFISPFE 386 ++A++LEERR M+Q WAD+L + + P Sbjct: 382 -NQADYLEERRRMMQSWADYLGQLKAGKAEKVVPIN 416 >UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VMW7_9GAMM Length = 419 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 145/386 (37%), Positives = 221/386 (57%), Gaps = 19/386 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+G ++WRL+YR+ G++ L +G YPEI+LA AR RDEAR L + +DP K Sbjct: 45 LYLEVTPSGGRFWRLKYRFNGRESTLTIGSYPEISLAQARRARDEARIQLYSNIDPNAVK 104 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 + ++ FK +A+EW K E R L E +LF ALG I ++K +D Sbjct: 105 NQRLQQTDESILFKSLAMEWMEDRKAVIKETTYLRDLSVFEKDLFPALGNMPIDQIKGKD 164 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +LA K +E G LE+A R T I R+A++ G+++ +P + A+ +H L Sbjct: 165 VLACAKKIEARGALEMAKRSIPLTGRIFRFAIRKGIMENDPTPHLQEALKPRKVKHMARL 224 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 ++ P L ++D Y G P+ + AI+L L F+R++ELR W EIDFE +W IP ++ Sbjct: 225 DILEFPPFLERMDRYHGSPMIKTAIQLMTLTFVRTAELRMMEWDEIDFETKLWRIPADK- 283 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 KM H+VPLS QA+ +++Q++ G +F +H + KPMS N + Sbjct: 284 -----------MKMAQPHIVPLSKQAIELIEQLRPLTGNKQYVFY-NHSTAKPMSSNALL 331 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 +R MGY+ K + GHGFR +A ++L E G + DA+E Q++H N+V AY H A+H Sbjct: 332 CVIRTMGYNGK--MTGHGFRGLASTTLHEQG-YMHDAIEIQLAHRVGNAVSQAYNH-AQH 387 Query: 360 LEERRLMLQWWADFLDVNRERFISPF 385 L+ R M+Q W+DF+D R + I PF Sbjct: 388 LDYRIKMMQEWSDFIDGLRNK-IVPF 412 >UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio RepID=B8J055_DESDA Length = 402 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 138/389 (35%), Positives = 223/389 (57%), Gaps = 18/389 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L G K+WR++YR GK+K L+ G +P+I+L +AR RDEA++ L +DP +K Sbjct: 30 LYLETSVAGGKHWRMKYRVNGKEKRLSFGPWPDISLKEAREMRDEAKRQLRESLDPSAEK 89 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K K EQ+ A TF+++A+E+ + W+ H V L +++ A G + IA + +D Sbjct: 90 KKAKQEQA-APTFRDIALEYVEHQRSVWAASHTRTVEGRLALDVYPAFGAKPIAAVTPQD 148 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA- 178 +LA ++ +E E A+R+ + I +YAV GL++ +P +++ A+ + A Sbjct: 149 ILAMLRKIEERRAFETASRVLGFCSLIFKYAVTLGLVEADPCRDLRPALKPYAKGQLAAI 208 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 + K + L+ ID Y G + R A+ + L F R E+R W+EI+FE WTIP E+ Sbjct: 209 TKPKEVGALMRAIDDYKGSVVVRAALLFSALTFCRPGEIRHVEWAEINFEREEWTIPAEK 268 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K RT H VPLS QAL +L I + G+ +F +++P+SEN V Sbjct: 269 ------------MKGRTEHRVPLSRQALEVLHGIMPYTGSAKYVFPTPRSNNRPLSENGV 316 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 SALR MGY TK ++ HGFR+MA + L E G DA+E Q++H + +RA Y ++AE Sbjct: 317 LSALRNMGY-TKEQMTAHGFRSMASTLLNELG-HRPDAIEAQLAHKGADKIRATY-NRAE 373 Query: 359 HLEERRLMLQWWADFLDVNRERFISPFEY 387 +++ERR ++Q WAD+L+ + + + P + Sbjct: 374 YMKERRNLMQAWADYLEDLKMQSMQPGQI 402 >UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root RepID=A1BGX1_CHLPD Length = 419 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 153/390 (39%), Positives = 225/390 (57%), Gaps = 22/390 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HLLV +G K WR QYR++GKQK+LALG YPEI+LA+AR RR+EAR LLAN DP + K Sbjct: 31 LHLLVTTSGGKLWRFQYRFDGKQKLLALGQYPEISLANARKRREEARTLLANEQDPSEAK 90 Query: 61 KNDKVEQSK--ARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K ++ A +F+ VA EW G N WS HA V+ LE ++F A+G + ++E+ Sbjct: 91 KAAKKAEALKDASSFELVAREWFGKNDPVWSPGHALTVMCRLEKDVFPAIGSKPVSEITA 150 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ--- 174 D+ + +E G +E A R++ + RYAV +G ++++P+ + R+ Sbjct: 151 SDIRTMLLKIEARGAVETATRIKIMCGQVFRYAVATGRLEHDPSAALKSREIFRKREIRH 210 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H + K + LL ID Y G + + A++LT L+F+R EL+ WS+IDFE ++W+I Sbjct: 211 HAAITDPKELAPLLMAIDEYQGTFVVKSALQLTPLLFVRPGELQNMEWSDIDFEEALWSI 270 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P ER KMR HLVPLS Q+L+IL+ + G +F G PMS Sbjct: 271 PAER------------MKMRQPHLVPLSRQSLSILQGLHPATGHGRYVFTGRGSR--PMS 316 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 N++N+ALR +GYD+ V GHGFR A + L E + D +E Q++H R+ AY Sbjct: 317 NNSINAALRYLGYDSD-TVTGHGFRATARTILDEVLGFRVDLIEHQLAHAVRDPNGRAY- 374 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFISP 384 ++ L++RR M+Q WAD+L + P Sbjct: 375 NRTSFLDDRRQMMQAWADYLYSLKAGVKMP 404 >UniRef50_A1VQL7 Phage integrase family protein n=2 Tax=Burkholderiales RepID=A1VQL7_POLNA Length = 413 Score = 366 bits (939), Expect = e-100, Method: Composition-based stats. Identities = 150/394 (38%), Positives = 216/394 (54%), Gaps = 14/394 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M+LLV G KYWR+ YR+ GK+K LALGVYP ++LA+AR RD+ARKLLA +DP K Sbjct: 28 MYLLVTKAG-KYWRMNYRFAGKRKTLALGVYPAVSLAEARQGRDKARKLLAQDIDPSAAK 86 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + D+ + A TF+ VA E+H WSE HA + L+ E LF +G ++ +K Sbjct: 87 QEDRQATATAAANTFEAVAREFHALKAGGWSEGHATKWLRMNELYLFPHIGTLPLSTIKA 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 LLA ++ VE G L A LQ + RY VQ+G + NP ++ GA+ +H Sbjct: 147 PTLLAALRKVEKKGILSTAQDLQAMAGQVFRYGVQTGRCESNPGVDLKGALQPHIAKHFA 206 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ + +L ID+YTG+P T A++L+ L F R +R W+ ID + + TIP Sbjct: 207 AILDPVEAGAMLRAIDAYTGQPETLAALKLSALFFQRPGNIRAMEWAWIDLDGQMLTIPA 266 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +K S H VPL+ QAL +LK IKQ G +F G +PMS+ Sbjct: 267 -----KSMKSSKHEKANGKPHTVPLARQALDVLKSIKQLTGHGRYVFPGARTGERPMSDG 321 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESG-LWSRDAVERQMSHMARNSVRAAYIH 355 T+N+ALR + Y E HGFR MA + + E +D VE Q+ H + + +AY Sbjct: 322 TINAALRRLDYGN-NEHVAHGFRAMARTMMAERLSGIPQDMVEAQLGHGKKGPLGSAY-D 379 Query: 356 KAEHLEERRLMLQWWADFLDVNR-ERFISPFEYA 388 ++E+L +R+ M+Q WAD+LD R + F+ A Sbjct: 380 RSEYLPQRQQMMQTWADYLDKLRTGAEVIQFKAA 413 >UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MGW9_DIAST Length = 428 Score = 364 bits (935), Expect = 2e-99, Method: Composition-based stats. Identities = 141/401 (35%), Positives = 229/401 (57%), Gaps = 24/401 (5%) Query: 1 MHLLVHPNGSKY-WRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++LL++ NG K+ WR Y+ +GK+K ++LG YP +L+ AR + + AR+L+A G+DP Sbjct: 29 LYLLLYVNGGKHGWRFDYKVQGKRKTISLGTYPATSLSLARAKANAARELVAAGIDPSAD 88 Query: 60 KKNDKVEQSKAR--------------TFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLF 104 +K+ K + K TF+ VA EW + +W+ +A +VL+ LE ++F Sbjct: 89 RKSKKAAEKKVHEDAKLVAAGKPLNGTFEAVAREWFEVRSPEWAAKYAEKVLRRLEADVF 148 Query: 105 AALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM 164 +G R + ++ +LLA ++ +E G +E A R + + I R+AV +GL + A+++ Sbjct: 149 PHIGIRPVGDVTAPELLAVLRRIEDRGVIETAHRAHESCSQIFRFAVGAGLAKGDVARDL 208 Query: 165 AGAVASCNRQHRPALE-LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWS 223 G + +H PA+ KR+ ELL D Y G + R A+ L ++ +R ELR ARW Sbjct: 209 KGLLRKPRTRHFPAILCPKRLGELLRACDGYVGTHVVRAALSLAPMLLLRPGELRHARWD 268 Query: 224 EIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF 283 EI+ + WTIP ER +K G H+VPL QA+ +L+++ G +L+F Sbjct: 269 EINLNTATWTIPGER-----MKREREGKLNGMPHIVPLPRQAVQVLRELHPITGRGELVF 323 Query: 284 IGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSH 343 G+ H+PMSENTVN+ALR MG+ EV GHGFR A + L E + + +E Q++H Sbjct: 324 RGERHHHRPMSENTVNAALRAMGFGAD-EVTGHGFRATARTLLDERLGIASEIIEAQLAH 382 Query: 344 MARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISP 384 ++S+ AY ++ E+L +RR M+Q WA++L+ R + Sbjct: 383 SVKDSLGRAY-NRTEYLVQRRKMMQQWANYLEALRRGNATN 422 >UniRef50_Q2T016 Site-specific recombinase, phage integrase family n=30 Tax=Bacteria RepID=Q2T016_BURTA Length = 438 Score = 362 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 147/380 (38%), Positives = 226/380 (59%), Gaps = 23/380 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V PNGS+YWR++YR++GK+K+ + GVYPE++LA AR ARKLLA G DP ++K Sbjct: 71 LYLQVMPNGSRYWRMKYRFDGKEKLASFGVYPEVSLAQARQACLAARKLLAAGTDPTEQK 130 Query: 61 KNDKVEQS--KARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K ++ + +F+ VA EW + K W+E +A++V+ SLE + F +G + + +++ Sbjct: 131 REIKRARAIEASSSFEAVAREWFESQKDGWTEVYANKVINSLEVDAFPRIGSKPLRDIEA 190 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG---AVASCNRQ 174 D+L ++A+E G E A R+ QR+ A+ +Y + +G NPA ++ + Sbjct: 191 PDMLEIVRAIEARGVRETAKRVLQRSRAVFQYGIMTGRCSRNPAADIDAETVLKKGQGVK 250 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H ++ IP+L+ I +Y+G +T+ A+ L F R++E+ A W E D A+ W I Sbjct: 251 HMARVKPVEIPQLMRDIAAYSGDRVTQLALRFMALTFTRTTEMINAEWDEFDERAAEWRI 310 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 PP+R KMR H+VPLS QAL +L +++ G L+F +S Sbjct: 311 PPDR------------MKMRDPHIVPLSRQALEVLAALRELNGNQRLVFYSVQGRS-HIS 357 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 NT+ AL MGY K + GHGFR +A + L E G +SRD V+RQ++H RN V AAY+ Sbjct: 358 NNTMLYALYRMGY--KSRMTGHGFRGLAATVLRELG-YSRDVVDRQLAHAERNQVTAAYV 414 Query: 355 HKAEHLEERRLMLQWWADFL 374 H AE+L ERR M+Q WAD+L Sbjct: 415 H-AEYLPERRKMMQHWADYL 433 >UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P090_AZOSE Length = 402 Score = 360 bits (925), Expect = 4e-98, Method: Composition-based stats. Identities = 129/392 (32%), Positives = 199/392 (50%), Gaps = 20/392 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WR ++R GK+ + A+G YP ++LADAR RDEAR L+ G +P + Sbjct: 26 LYLEVTPAGGKLWRYRFRLAGKENVFAIGAYPRVSLADARKARDEARDLVKQGFNPSHYR 85 Query: 61 KNDKVE--QSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K TF VA EW+ + WS+ H H V L+ ++ +G+ I + + Sbjct: 86 QQAKQAVIDENLNTFAPVADEWYQSKVDSWSKGHRHHVRTILDKDILPRIGKLPIRSITS 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 L +K + G A +Q ++ A+ + D NPA+ + +A C +H Sbjct: 146 PLLHDVMKKIVARGATTRAILARQIMGSVFNLAILTHRADTNPAEPLKRQIARCVTEHHR 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 LE + + + L K+ YTG TR A++L +L +R E+ ARW+E D + WTIP E Sbjct: 206 HLEERDVGDFLRKLSDYTGHATTRIALQLLMLTAVRPGEVCGARWAEFDIDGQNWTIPKE 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R H+VPLS QA+ +LK+++ G +F + M + Sbjct: 266 R------------MKTRKPHIVPLSNQAVDLLKELEPITGDTAFLFPSQGTKTQTMPTQS 313 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + +A+ +GY K HG R + L G ++ D +ERQ++H N VRA+Y H Sbjct: 314 IRNAVVKLGYADK--FSPHGARGTFSTMLNGRG-YNSDWIERQLAHDEGNRVRASYNH-M 369 Query: 358 EHLEERRLMLQWWADFLDVNR-ERFISPFEYA 388 ++L ERR MLQ WAD LD R + PF+ + Sbjct: 370 QYLPERRKMLQEWADLLDELRTGAKVLPFQRS 401 >UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV41_9DELT Length = 401 Score = 360 bits (923), Expect = 6e-98, Method: Composition-based stats. Identities = 149/383 (38%), Positives = 225/383 (58%), Gaps = 18/383 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP-GDK 59 +++LV+P G K WRL+YR+EGK+++ A+G YP ++L +AR R A++++A GVDP + Sbjct: 28 LYVLVNPGGGKLWRLKYRFEGKERLFAIGTYPAVSLKEARARAVTAKEMIARGVDPCAAR 87 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K +++RTF+ VA EWH W+ +HA ++++ LE F LG R IAEL Sbjct: 88 KAAKAEAIARSRTFEVVAREWHKKKLAGWTPNHARQIIRRLETLAFPDLGSRPIAELGAP 147 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ-HRP 177 D LA + VE G LE A RL Q + RYA +G+I +PA + A+ + + H Sbjct: 148 DFLAVLGKVERQGHLETARRLAQICGQVTRYARLAGMIVADPASHLTEALTTKPVRLHAA 207 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 E + I LL ID Y G +A+++ +F+RSSELR A W+EID + + W IP E Sbjct: 208 ITEPREIGALLRAIDDYPGDVSVSFALKIMPYVFVRSSELRRATWAEIDLDRAEWLIPAE 267 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R KMR HLVPL+ Q + + + + G +L+F G + +S+ Sbjct: 268 R------------MKMRRPHLVPLARQVVGMFRALHAITGNRELVFPGTASVTRCISDVG 315 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + +ALR +GY + E+ HGFR+MA + L E G + D +E Q++H RNSVR AY ++A Sbjct: 316 LLNALRRLGY-GRDEMTVHGFRSMASTRLNEMG-YRPDVIEAQLAHAERNSVRDAY-NRA 372 Query: 358 EHLEERRLMLQWWADFLDVNRER 380 +++EERR M+Q WAD+LD R+ Sbjct: 373 QYVEERRRMMQEWADYLDSLRDG 395 >UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacteria RepID=Q3JN19_BURP1 Length = 462 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 146/390 (37%), Positives = 218/390 (55%), Gaps = 20/390 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M LLV PNG KYWRL YRY GKQK LALGVYPE++LA AR RR EAR+ LA G DPG+ K Sbjct: 83 MFLLVQPNGGKYWRLAYRYLGKQKTLALGVYPEVSLALARQRRAEAREQLAKGADPGETK 142 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTNKKWSEDHAH-RVLKSLEDNLFAALGERNIAELKT 117 K D+ A +F+ VA+ W + + E H R L L++++F LG+R IA++ Sbjct: 143 KADRRAARLAADNSFEVVALAWLEERRPYVEPRQHERTLVRLKNDVFPWLGKRPIADIDA 202 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++LA +K ++ G A R++ + Y ++ G NPA + A+ H Sbjct: 203 PEILAVLKRIDSRGARFTAHRIRSEIGRVFVYGIKEGHCKANPAASLVKAIPPAQTTHFA 262 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 + E ++ E+L D ++G A++L ++F+R ELR A WS D E + W Sbjct: 263 SITEPAQVGEMLRAFDGFSGTFPVLCALKLAPMLFVRPGELRKAEWSHFDLEKAEWR--- 319 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 + +K +T HLVPL+TQA+ ILK++ G+ +F G +PMS+ Sbjct: 320 -----------YLVTKTKTEHLVPLATQAVKILKELHAVTGSGQYVFPGARSKQRPMSDA 368 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 +N+ALR +GYDT+ E+ GHGFR MA + L E + +E Q++H +++ AY ++ Sbjct: 369 AINAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQLAHTVPDTLGRAY-NR 427 Query: 357 AEHLEERRLMLQWWADFLDVNR-ERFISPF 385 + ++ER M+Q WADFLD + I P Sbjct: 428 TKFIKERCAMMQKWADFLDQLKLGAKIIPI 457 >UniRef50_B1Y3M2 Integrase family protein n=4 Tax=Proteobacteria RepID=B1Y3M2_LEPCP Length = 433 Score = 359 bits (921), Expect = 1e-97, Method: Composition-based stats. Identities = 149/396 (37%), Positives = 225/396 (56%), Gaps = 23/396 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P GS +WR +YR+ GK+ ML+LG YP+ +L+ AR RRDEAR+ LA G++P + + Sbjct: 34 LRLDVQPTGSAWWRWRYRFGGKEGMLSLGTYPDTSLSAARGRRDEARERLAAGINPSEAR 93 Query: 61 KNDKVEQSKAR--------------TFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFA 105 K+DK Q+ TF+ A EWH WSE HA +VL L ++LF Sbjct: 94 KDDKAAQALKAEAARLAAAGLPGPGTFEHAAREWHARMAPSWSEGHAGKVLALLVNDLFP 153 Query: 106 ALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA 165 +G +AEL +LL + +E G +E A R + A+ R+ VQ+G D +P +++ Sbjct: 154 FIGTSALAELTPPELLKHARRIEARGAVETAYRALKAAGAVFRHGVQNGYCDSDPTRDLK 213 Query: 166 GAVASCNRQHRPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE 224 GA+ +HR A + R+ ELL ID Y G P+ R A+ L L+F+R ELR A W+E Sbjct: 214 GAIVLPVPEHRAAITDPARLGELLRAIDGYQGTPVVRSALALAPLVFLRPGELRKAEWAE 273 Query: 225 IDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI 284 D +A++WTIP R +K + H+VPL+ QA AIL+ ++ GA +F Sbjct: 274 FDLDAAVWTIPAAR-----MKGRLKAKLNGPDHVVPLAPQAAAILRDLQPLTGAGKYVFP 328 Query: 285 GDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM 344 +P+S+N V SALR MG+D K E+ GHGFR A + E +E Q++H+ Sbjct: 329 NPLTPDRPLSDNGVLSALRRMGFD-KDEMTGHGFRATARTIAAERLKIDPVVLEAQLAHV 387 Query: 345 ARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 +++ AY ++ ++L++RR M+ WAD+LD R+ Sbjct: 388 VADALGRAY-NRTQYLDQRRDMMTRWADYLDRLRKG 422 >UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepID=C9NQJ4_9VIBR Length = 415 Score = 359 bits (920), Expect = 1e-97, Method: Composition-based stats. Identities = 132/388 (34%), Positives = 207/388 (53%), Gaps = 21/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKM--LALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L + PNGSK+W L Y +K L+LG YP+++LA+AR EA++LLA G+DP + Sbjct: 31 LRLRIKPNGSKHWILNYYRPSNRKRANLSLGKYPDLSLANARKMTLEAKELLAQGIDPQE 90 Query: 59 KKKNDKVEQSK--ARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++K ++EQ TF V +W K + D+A + +SLE ++F L + + ++ Sbjct: 91 ERKRHQLEQKANHEHTFINVTTKWFEIKKDDVTPDYAVDIWRSLELHIFPQLSDVPVRDI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 ++ +K +E G LE RL QR +M YA GL+ NP + A +++ Sbjct: 151 TAPQVIELLKPIEAKGSLETVKRLAQRLNEVMNYATNCGLVQANPLTGIKAAFKKPKKEN 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 AL +PEL+ I + + + TR IE L R SE ARW EID++ +WTIP Sbjct: 211 MAALTPAELPELMGAIANASIKRTTRCLIEWQLHTMTRPSEASGARWEEIDWDEKVWTIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 PER K R H +PL+ Q L +L+ IK G + IF D D KP + Sbjct: 271 PER------------MKKRREHRIPLTEQMLELLEVIKPISGHREFIFPSDRDPKKPCNS 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T N AL+ MG+ + + HG R++A ++L E G + D +E ++H N VR+AY + Sbjct: 319 QTANMALKRMGFAGR--LVSHGLRSLASTTLNEQG-FEPDLIEAALAHADDNQVRSAY-N 374 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFIS 383 + ++LE RR M+ WW+ ++ + +S Sbjct: 375 RTDYLERRRPMMCWWSGHIEEAAKGSLS 402 >UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V414_SPHWW Length = 417 Score = 357 bits (917), Expect = 3e-97, Method: Composition-based stats. Identities = 147/400 (36%), Positives = 225/400 (56%), Gaps = 21/400 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L+V P+GSK WRL+YRYEGKQK L LG +P++ +++AR+RR++ARKL+ G DP K Sbjct: 26 LTLVVQPSGSKVWRLKYRYEGKQKTLHLGHWPKVGISEARIRREDARKLIEEGTDPALVK 85 Query: 61 K----NDKVEQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + KV+ +F+ VA EW ++ ++ L D + ALG + I + Sbjct: 86 RFGPVAAKVKIVAGNSFRAVAEEWLEKCEREGLSQVTLNKIRWLLDKAYPALGSKPIEVI 145 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + D LA +K +E G LE A RL+ + I R+AV +G I+ + A ++ GA+A+ ++ Sbjct: 146 RPLDALAVLKKLEAEGILESARRLRSVLSRIFRFAVATGRIERDVAADLRGAIATPKGKN 205 Query: 176 RPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 A + LL I++Y+G +T A+E + +F+R ELR A W E+D + +IW I Sbjct: 206 LAAITTAREAGVLLRAIENYSGHEITAIALECSAHLFVRPGELRQAEWPELDADEAIWAI 265 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 PPE+ +KMR H VPLS Q + L ++ G +F + PMS Sbjct: 266 PPEK------------TKMRRPHWVPLSRQMMEKLHRLHDLTGGGKYLFPCLGNDDMPMS 313 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 ENTVN ALR +G+ + ++ HGFR MA + L ESG W DA+ERQ++H+ N VR AY Sbjct: 314 ENTVNLALRRLGF-GQDQMTAHGFRAMAATLLNESGQWHPDAIERQLAHIETNEVRRAYT 372 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFISP-FEYAKINNP 393 + E+ ER M+QWW+D ++ R + + + P Sbjct: 373 -RGEYWPERVRMMQWWSDHIEELRRAPLVQRGSFGSVPTP 411 >UniRef50_C0N6F7 Site-specific recombinase, phage integrase family protein n=2 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6F7_9GAMM Length = 401 Score = 357 bits (915), Expect = 5e-97, Method: Composition-based stats. Identities = 148/384 (38%), Positives = 226/384 (58%), Gaps = 19/384 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V GSK WR ++ +EG ++ L+LG YP+I+L +AR +RD+ RK + G+DP ++ Sbjct: 34 LYIEVPLKGSKRWRYKFYFEGTERKLSLGTYPKISLKEARQKRDDIRKKIDAGIDPSYER 93 Query: 61 KNDK-VEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + T++EVA EWH NK W++ +A L LE N F +G+R I ++ Sbjct: 94 RKKRLNASVSGNTYEEVAREWHARNKANWTKKYADLTLSRLEQNAFPWIGDRQIDKITAP 153 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 +LL IK V G +E A R+++ + I ++A+ +G+ + NPA + GA + +H A Sbjct: 154 ELLTVIKRVFDRGAIETAHRIRRLSNTIFKFAIANGMTETNPAAALEGAFPTQKVKHHSA 213 Query: 179 -LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 E K++ ELL ID Y+G TR A++L+ L+ R +R A W +ID E S+W I Sbjct: 214 VTEPKKVAELLRAIDGYSGHFATRCALKLSALVMNRPINIRAAEWGDIDLENSVWRIHMG 273 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R TH++PLS QAL IL++I+ G +F +PMSENT Sbjct: 274 R------------MKSRRTHIIPLSRQALEILEEIRPLTGEGKYVFPCMRSKARPMSENT 321 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + +ALR MG+ + E+ HGFR MA + L E G ++ D VERQ++H+ +S R+AY H A Sbjct: 322 ICAALRRMGFSGE-EMSAHGFRGMASTLLHEKG-YNSDWVERQLAHID-SSTRSAYNH-A 377 Query: 358 EHLEERRLMLQWWADFLDVNRERF 381 +HL++R MLQ WAD+LD R F Sbjct: 378 QHLDDRAKMLQEWADYLDELRINF 401 >UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea psychrophila RepID=Q6AR70_DESPS Length = 399 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 141/385 (36%), Positives = 210/385 (54%), Gaps = 26/385 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + V +G K W +YR + KQ+M LG YPE++L AR EAR L+ G +P ++ Sbjct: 24 LSFEVTKSGVKRWLYRYRLDDKQQMCVLGRYPELSLEQARKIHREARALVREGCNPARER 83 Query: 61 KNDKVE---------QSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGER 110 + K E ++++F+ +A+EW NK WS H VL SL +N+F+A G Sbjct: 84 RRKKQEVISKEKAERDDRSKSFEYIALEWIENNKESWSPSHQQAVLASLRNNVFSAFGNT 143 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 + + D+L I+A+E G LE+ ++ QRT A+ RYA+Q+G YNPA +M GA+ + Sbjct: 144 PVDTITPPDVLRTIRAIENRGSLEIVRKVLQRTNAVFRYAIQTGRATYNPAADMQGALKA 203 Query: 171 CNRQHRPALELKRIPELLTKIDS-YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 +H PA+ + +LL I S T+ AI+ T L R E+R ARW E++ + Sbjct: 204 KTVEHMPAVFDSELAQLLQDISSNQKIHVTTKLAIQFTALTACRGGEVRNARWQEVNLDT 263 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 + W IP ER KMR H+VPLS QALAIL + +G +F D Sbjct: 264 NEWHIPAER------------MKMRRAHIVPLSIQALAILHRAGALWGEDGFVFPSIRDR 311 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 KPMS+N + A R MGY K HGFR+ S E ++ + +E+ ++H +N V Sbjct: 312 SKPMSDNAMGKAFRDMGYRGKA--TPHGFRSSFSSMAHEQSGFASEVIEKSLAHEEKNKV 369 Query: 350 RAAYIHKAEHLEERRLMLQWWADFL 374 + AY ++AE+LE+RR +LQWW + L Sbjct: 370 KGAY-NRAEYLEQRRELLQWWGEKL 393 >UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholderiales RepID=A1WLK0_VEREI Length = 421 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 142/381 (37%), Positives = 214/381 (56%), Gaps = 11/381 (2%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+GSK W +YR++G++K LALGVYP++ L DAR RD+ARK GVDP ++ Sbjct: 27 LYLEVSPSGSKRWFWKYRFDGREKRLALGVYPDVPLKDARTARDDARKQHQRGVDPVLER 86 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + ++ TF+ VA E+H T K+ WS ++A R L+ LE ++F LG+ + ++ Sbjct: 87 QLERLSNRSDPEATFEVVAREFHTTKKRSWSLEYARRWLERLEKDIFPWLGKLPLKQISA 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 LL ++ VE G E+ L + RY + +G D N A ++ GA+ +H Sbjct: 147 PMLLQALRRVEARGARELPHSLLEACGQTFRYGIATGRCDRNSAADLRGALRPVLTKHMA 206 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ E K + EL+ I Y G+ TR A+ L+ L+F R +R W E+D EAS+W IP Sbjct: 207 AILEPKEVRELMLAIRGYDGQLTTRVALYLSALLFQRPGNIRQMEWEEVDLEASMWKIPS 266 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 E+ +K HLVPL+ QA+A+L+ ++ G +F +PMSEN Sbjct: 267 EK-----MKRKKSEKLNGRPHLVPLARQAVAVLRDLQPLTGRGRYVFPAVVSPKRPMSEN 321 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 TV ALR MG+D + HGFR MA + LVE S D +E Q++H + +AY + Sbjct: 322 TVRVALRRMGFDND-TMTPHGFRAMARTLLVEWLNISSDVIEVQLAHRKSGPLGSAY-DR 379 Query: 357 AEHLEERRLMLQWWADFLDVN 377 AE + +R+ M+Q WAD+LD Sbjct: 380 AEFMVQRQTMMQSWADYLDAL 400 >UniRef50_D0W4G5 Site-specific recombinase, phage integrase family n=4 Tax=Neisseria RepID=D0W4G5_NEICI Length = 428 Score = 355 bits (910), Expect = 2e-96, Method: Composition-based stats. Identities = 133/384 (34%), Positives = 214/384 (55%), Gaps = 17/384 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L ++ +G K WR + GK+K L++G YP ++LA+AR + AR++LA G DP + K Sbjct: 49 LYLYINTSGGKLWRFDFACNGKRKTLSIGKYPTVSLAEARETAETARRMLAAGQDPSEAK 108 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +K E+ A TF+ +A WH N +W E+HA RVL+ E ++F +G I E++ Sbjct: 109 QQEKEERKAAALNTFESIARRWHTDNLTRWKENHAARVLRYFETDVFPVVGAMPIQEIRV 168 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 + + +V G A ++++ A+ YA L + NPA + + S +RP Sbjct: 169 NHIKTLLDSVMARGVNNTAEKIREWAGAVFDYAALLELTESNPAHVLRRYIPSVPAGNRP 228 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 AL + + E ++ P R A+ L +L+F+R++ELR RW EIDF+A +W IP E Sbjct: 229 ALPREELTEFFCRLLLADIEPQNRIALMLIMLVFVRNTELRGGRWDEIDFDARLWVIPAE 288 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R +KH K H VPL+ L +L ++K G +F +SENT Sbjct: 289 R-----MKHEKTAPK--PPHTVPLADWTLELLAELKAITGDTPYLFPSRTKKDGFISENT 341 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + + MGY K HGFR +A S L E G ++ DA+ERQ++H+ N +RAAY ++A Sbjct: 342 LGKIMNNMGY--KGIATPHGFRALASSVLNEQG-FNPDAIERQLAHVEENRIRAAY-NRA 397 Query: 358 EHLEERRLMLQWWADFLDVNRERF 381 +++ ERR M++W++ +L RER+ Sbjct: 398 DYMTERREMMEWYSGYL---RERY 418 >UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteobacteria RepID=INTA_ECOLI Length = 413 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 133/395 (33%), Positives = 211/395 (53%), Gaps = 21/395 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + LL+ +GSK W+ +Y ++ + G YP ++L+DAR R E++ LLA +DP + Sbjct: 31 LTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPAVSLSDARKLRAESKVLLAKDIDPQE 90 Query: 59 KKKND--KVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 +K +++K TF VA W K +ED+A + +SLE ++F A+G+ +I E+ Sbjct: 91 HQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTEDYADDIWRSLERDIFPAIGDISITEI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 K L+ ++ V+ G LE RL QR +M YA +GLID P+ + A +++ Sbjct: 151 KAHTLVKAVQPVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKN 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 P++ ++P+L+ + + + TR LL R +E ARW EIDF AS W IP Sbjct: 211 MPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLLTITRPAEAAEARWDEIDFNASEWKIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R KM H VPLS ALAIL+ +K G + IF ++PM+ Sbjct: 271 AAR------------MKMNRDHTVPLSDGALAILEMMKPLSGGREFIFPSRIKPNQPMNS 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 TVN+AL+ G + HG R++A ++L E G + D +E ++H+ +N VR AY + Sbjct: 319 QTVNAALKRAGLGG--VLVSHGLRSIASTALNEEG-FPPDVIEAALAHVDKNEVRRAY-N 374 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFISPFEYAKI 390 ++++LE+RR M+QWWAD + I +KI Sbjct: 375 RSDYLEQRRPMMQWWADLVKAADSGSIVLTHLSKI 409 >UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8U1_ACAM1 Length = 399 Score = 353 bits (905), Expect = 9e-96, Method: Composition-based stats. Identities = 133/386 (34%), Positives = 209/386 (54%), Gaps = 22/386 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + P G K+W+ +YR +GK+ ++G YPE+ L +AR + EAR+L+A G++P + Sbjct: 29 LFLQITPAGGKHWKYRYRIQGKESTFSIGSYPELGLGEARAKHLEARRLVAQGLNPTTEA 88 Query: 61 KNDKV--EQSKARTFKEVAIEWH-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K ++ + ++ TF+ VA EW N WSE + V L +L +LG R + E+ Sbjct: 89 KRLQLSLQLAQGNTFEFVADEWFSQKNAGWSESYRGIVRNRLNRDLNPSLGPRPVTEITA 148 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++LA I+AVE G +A + ++ YAV +G D N ++ GA+A + +HR Sbjct: 149 PEVLAVIRAVEARGANALAHKCLSIVRMVLGYAVATGRCDRNVVNDLGGALAPVDAKHRA 208 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A + KR+ EL+ I Y G + R A+ + L F+R ELR +WS+I++ W Sbjct: 209 AITDPKRVGELMRMIADYRGSMVVRAAMRMGALTFVRPGELRTMQWSQINWNTKEWRF-- 266 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA--HDLIFIGDHDSHKPMS 294 + SK T H+VPL+TQA+ IL+ ++ G +F + + MS Sbjct: 267 ------------QVSKTETDHIVPLATQAIEILQTLQLITGNGTSRYVFPSANSMTRHMS 314 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 N V +ALR MG TK E+ GHGFR MA + + E + + +E Q++H R + AY Sbjct: 315 NNAVLAALRAMGI-TKDEMSGHGFRAMARTLIAEELHYRPELIEHQLAHAVRGPLGRAY- 372 Query: 355 HKAEHLEERRLMLQWWADFLDVNRER 380 ++ E LEERR M+Q WAD+LD Sbjct: 373 NRTEFLEERREMMQAWADYLDELERD 398 >UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K287_PSEFS Length = 401 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 135/383 (35%), Positives = 203/383 (53%), Gaps = 11/383 (2%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V PNG +YWRL+YR+ GK+K LALGVYPE+ L +AR +RD+AR LA+G DP ++ Sbjct: 26 LYLEVQPNGGRYWRLKYRFLGKEKRLALGVYPEVGLQEARRKRDDARVQLASGQDPSLQR 85 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K + TF+ VA +W + W ++ V + LE N F LG+ I+ + T Sbjct: 86 RMAKVVSQLDHQHTFESVATQWLNIRESSWDPEYTRTVRQRLELNAFPWLGKLPISSIST 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 L+ ++ + G E A R+ Q I +A +G+ N ++ + + +H Sbjct: 146 PMLVENLQRIIKRGARETARRVAQIYKQIFEFAEAAGITPPNQIGNLSRTLPAKRVKHFA 205 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A + +++ LL +DSY G A++L L+F R +LR WSE++ +A W IP Sbjct: 206 AVTDPEKLGALLKALDSYAGTMPVCCALKLAPLLFCRPGDLRHMEWSEVNLDAGEWLIPG 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 + +K + R HLVPLS QA+A+L ++K G H F +PMS N Sbjct: 266 HK-----MKGLTATKQDRPDHLVPLSQQAIAVLHELKPLTGRHRYAFPSARGGDRPMSNN 320 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 V SALR M E+ GHGFR A + E + D +E Q++H +N + AY + Sbjct: 321 AVLSALRRMDISGD-EMTGHGFRATARTIGAEVLGFRPDLLEHQLAHTVKNPLGRAY-DR 378 Query: 357 AEHLEERRLMLQWWADFLDVNRE 379 L ERR M+Q WADFLD + Sbjct: 379 TSFLPERREMMQIWADFLDSIKR 401 >UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7MWW9_VIBHB Length = 410 Score = 351 bits (901), Expect = 2e-95, Method: Composition-based stats. Identities = 116/379 (30%), Positives = 199/379 (52%), Gaps = 21/379 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L + PNG+K W Y + K+K + LG YP+++LA AR +R R+L+A G+DP Sbjct: 31 LLLRIMPNGTKSWLFNYIHPSTKKRKNIGLGKYPDVSLATAREQRQTMRELVAKGIDPKT 90 Query: 59 KKKNDKVEQ--SKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + N + + + T VA EW S D+A + +SLE ++F LG+ + E+ Sbjct: 91 HRDNQQTAEKLAAQDTLLHVAKEWFELKQHSVSSDYADDIWRSLELHIFPNLGQLPLREI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 ++A ++ +E G LE R+ QR +M YAV G ++ NP + +H Sbjct: 151 LAPTVIAQLRPLEAKGSLETVKRVCQRLNEVMTYAVNCGKVEANPIANIKQVFKKPKVKH 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 + + + LL + + +TR A E L R SE A W+EIDF +WTIP Sbjct: 211 MKTITPQDLSFLLESMSKVNIKLVTRCAFEFQLHTLTRPSECVKAEWNEIDFAQKLWTIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 ++ KM+ H +PLS + +L+ +K H +F D + M+ Sbjct: 271 KDK------------MKMKRDHKIPLSDPVIKLLQFMKPISFEHKYVFPSDAKAGSHMNS 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 +VN+A++ G+ K + HG R++ ++L E G +++DA+E ++H+ +N++R Y + Sbjct: 319 QSVNAAIKRAGFSGK--LVSHGMRSIGSTALNEQG-FNKDAIELCLAHVDKNTIRDIYNN 375 Query: 356 KAEHLEERRLMLQWWADFL 374 AE+LEERR ++QWW++++ Sbjct: 376 -AEYLEERRNVMQWWSEYI 393 >UniRef50_B4X5T7 Site-specific recombinase, phage integrase family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X5T7_9GAMM Length = 398 Score = 350 bits (899), Expect = 3e-95, Method: Composition-based stats. Identities = 141/387 (36%), Positives = 213/387 (55%), Gaps = 23/387 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M L + P G K+WR +YR+ GKQK L+LG YP +L AR +R +AR+LLA+GVDP ++ Sbjct: 29 MFLEISPKGGKWWRFKYRFNGKQKRLSLGTYPSTSLKAARDKRQQARELLASGVDPAQQR 88 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTN---KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K +K+ A TF VA EW +KW+ + L++ L LG R I+E+ Sbjct: 89 KTEKLATETALRNTFAGVAEEWAQNKVRSEKWTPTTEKKRRIWLDNGLMPYLGSRPISEI 148 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 T +L ++ + + A RL+ + I +A+ +G D NPA + G +A +H Sbjct: 149 TTAELWGVLQHTQKTSGY-TANRLRGMASEIFNFAMATGRADNNPALPLQGQIAVKKEKH 207 Query: 176 R-PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 R LE + ++L ID T+ A L L+F+R ELR A WSEID + ++W+I Sbjct: 208 RLAILEPDEVGKMLRAIDGCQAAVTTKAAARLAPLVFVRPGELRHAEWSEIDLKKALWSI 267 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E+ KMR +H+VPLS QA+AILK+I+ G+ +F G +P+S Sbjct: 268 PAEK------------MKMRESHVVPLSRQAVAILKEIQPLTGSSGYVFEGT-KPGEPIS 314 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 +NT+N L+ +GY K + HG+R +A + L E D +E Q++H R++ AY Sbjct: 315 DNTLNKLLKALGYKGK--MTQHGWRAIARTLLDEVLDVRVDWIEHQLAHSVRDANGRAY- 371 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERF 381 ++ HLE R M+Q WAD+LD + R Sbjct: 372 NRTSHLEGRIGMMQLWADYLDKLKARK 398 >UniRef50_A3M8S0 Putative integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M8S0_ACIBT Length = 433 Score = 350 bits (899), Expect = 4e-95, Method: Composition-based stats. Identities = 158/396 (39%), Positives = 233/396 (58%), Gaps = 9/396 (2%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V P G+K W +Y G K++ + LG YP ++LA AR ++ E +++A GVDP + Sbjct: 31 LYLRVRPTGAKSWIFRYTNRGNDKREKITLGPYPALSLAKAREKKHEFLRMIAEGVDPKE 90 Query: 59 KKKNDKVEQSKARTFKEVAIEW---HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + +++ T + V W + K SED ++ L+ E++LF ++ I ++ Sbjct: 91 QLSILLAKKNNVNTLENVVRVWLDAYAVRKPLSEDTKNKQLRKFENHLFPKFKDKAIEQI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 RDL + V + A R++ + YAVQ I N A+++ S + H Sbjct: 151 TLRDLKDALN-VIYDHSPDNAQRIRASLIQVYSYAVQHSYIQTNIARDLEDMDLSARKNH 209 Query: 176 RPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 R L IP+L+ +I + +G PLT+ + L L F+RSSE+RFARW+EIDFEA IW I Sbjct: 210 RATFRSLDLIPQLIRRIKADSGNPLTKLCLLLGLHTFLRSSEIRFARWNEIDFEAEIWRI 269 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 PP R I GVKHS RG+KM+ HLVPLS Q++ IL+++ Q+ G D +F ++ +S Sbjct: 270 PPRRRLIEGVKHSDRGAKMKEEHLVPLSKQSIEILEKVYQYSGDCDFVFPSLNNKRIFIS 329 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 ENT N ALR MGY TK E+ HGFR +A S+L E ++SRDA+E+QMSH RN AY Sbjct: 330 ENTPNDALRRMGY-TKEEISFHGFRALARSALGEMSIFSRDALEKQMSHQERNETVGAYT 388 Query: 355 HKAEHLEERRLMLQWWADFLDVNRE-RFISPFEYAK 389 H AE+LEER ++Q W+D+L +ISP EY + Sbjct: 389 HIAEYLEEREKIMQIWSDWLSAIENGDYISPHEYGR 424 >UniRef50_Q2N8A1 Symbiosis island integrase n=12 Tax=Bacteria RepID=Q2N8A1_ERYLH Length = 409 Score = 350 bits (897), Expect = 7e-95, Method: Composition-based stats. Identities = 154/398 (38%), Positives = 226/398 (56%), Gaps = 24/398 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV G K WR++YR +G++K LA+G YPEI LA+AR RRD AR+ LA G DP +K Sbjct: 26 LFLLVERTGGKLWRMKYRIDGREKKLAIGRYPEIGLAEARRRRDAAREQLAQGKDPSREK 85 Query: 61 KNDKVEQS--KARTFKEVAIEWHGTNKK-----WSEDHAHRVLKSLEDNLFAALGERNIA 113 + K F +A E+ K W+ A R L L +++G IA Sbjct: 86 QRQKARAKLGAENNFASLAAEFCEKRKHDGSRAWAPATAKRCE-YLLSVLNSSIGHLPIA 144 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 +++ D+L ++ +E G+LE A R Q ++ RYAV + + +P +++ GA+ + Sbjct: 145 DIEPADILTAVRRIESKGKLESAKRTLQLAGSVFRYAVATARLKSDPTRDLRGALMNPTV 204 Query: 174 QHR-PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 H L+ ELL ID Y G+P+T+ A++L +F+R ELR A WSEIDF+ ++W Sbjct: 205 THYGAVLDPAGAGELLRAIDGYEGQPITKLAMQLAPHVFVRPGELRHAEWSEIDFDEALW 264 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 TIP + +KMR HLVPLS QA+AIL+ + G +F +P Sbjct: 265 TIPASK------------TKMRKDHLVPLSRQAIAILEMAHRLTGPDGYVFPSVRTRKRP 312 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 MS+NT+N+ LR +GY T E+ HGFR MA + L ESG W+ DA+E ++H + VRAA Sbjct: 313 MSDNTINAGLRRLGYATD-EMTAHGFRAMASTLLNESGKWNPDAIEGALAHGDSDKVRAA 371 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRERF-ISPFEYAK 389 Y H+ H +ER M++WW+D+LD RE + P + AK Sbjct: 372 Y-HRGAHWKERVKMMKWWSDYLDQLREGAEVVPIKAAK 408 >UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli RepID=Q93UI5_ECOLX Length = 401 Score = 349 bits (896), Expect = 8e-95, Method: Composition-based stats. Identities = 149/388 (38%), Positives = 213/388 (54%), Gaps = 21/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M+L + +G +YWR++YR+ GK+K+LA GVYP + + +AR + A++ L+ G DPG K Sbjct: 23 MYLQITASGGRYWRMKYRHGGKEKLLAFGVYPLVGIKEARDKLFYAKQALSRGEDPGATK 82 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K EQ A TFK VA +W +W R SLE +++ LG I+ + Sbjct: 83 KLAKFQAEQDAANTFKAVAEDWLDHQAGRWEAITLSRTRASLEADVYPTLGSLPISSITP 142 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM--AGAVASCNRQH 175 R ++ +K +E G E+A R+ QR +I RY I+ N ++ + + QH Sbjct: 143 RQVMDVVKKIEKRGASEIATRVLQRIKSIFRYGTTHQRIERNTMADLVPSEILKPRRVQH 202 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 R AL ++PE L K+ SY G P T A+ L +L R E+R ARW EID +A +W IP Sbjct: 203 RAALAPAQLPEFLKKLASYEGEPHTVNALHLLMLTAARPGEVRGARWDEIDLKAKLWRIP 262 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 PER KMR+ H+VPLS++A+A ++ ++ G DL+F KP+SE Sbjct: 263 PER------------MKMRSEHVVPLSSEAVAAIEAMRPLSGNRDLVFPSPFYPSKPLSE 310 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 NT NSA+ MGY K HGFR + + ESG WS DA+ERQ++H RN VRAAY Sbjct: 311 NTFNSAMARMGY--KYLATAHGFRALFSTVANESG-WSADAIERQLAHAERNQVRAAY-D 366 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFIS 383 + L ER M+ WWA +L + Sbjct: 367 RGVRLPERVKMMNWWAQYLAERKAGKAI 394 >UniRef50_C6RSU9 Phage integrase family protein n=3 Tax=Acinetobacter RepID=C6RSU9_ACIRA Length = 426 Score = 346 bits (888), Expect = 8e-94, Method: Composition-based stats. Identities = 133/389 (34%), Positives = 218/389 (56%), Gaps = 20/389 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LL+ NG+ WR Y K+ + +G YP ++LA AR RD+ R LLA G DP Sbjct: 40 LNLLIRKNGTVMWRFDYTRPVSKKRNTMTVGNYPAMSLAKAREYRDQFRALLAEGKDPQV 99 Query: 59 KKK--NDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 +K+ +K + TFK VA E + + ++ +E R E L+ +G I+++ Sbjct: 100 EKQGVEEKERLKQQATFKSVA-ELYKSKQRLAEATVKRNDGIFEK-LYRDVGNMPISDIT 157 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 RDL I+ E G +E A R++ + + + R+AV+ GL + + AQ++AG + + H Sbjct: 158 PRDLAKVIEKDENKGHIESAMRIRSKASQVFRFAVKMGLCERDVAQDLAGTITQREKNHY 217 Query: 177 PA-LELKRIPELLTKIDSYTGRPL-TRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 A + LL ID Y + + + A++L L+F+R ELR A+WS+I+FE + W+ Sbjct: 218 SALTDPFDFACLLFDIDHYESQLVHVKLALQLAPLVFVRIGELRNAKWSDINFETATWSY 277 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P + +K H+VPLSTQA+AILK+ F D +F D H+P+S Sbjct: 278 TPSKTS----------AKTGLDHIVPLSTQAIAILKEALNFTNNSDFVFPSRSDKHRPIS 327 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 + ++N ALR MGY K ++ GHGFR +A + L E + D +E+Q++H R+ AY Sbjct: 328 DMSINMALRRMGY-GKEDMTGHGFRAIARTLLDEVLEFPLDIIEQQLAHQVRDMHGRAY- 385 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFIS 383 ++ +HL++RR+M+Q W+D+ D + +FI+ Sbjct: 386 NRTKHLDKRRVMMQRWSDYCDELKAQFIA 414 >UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KY10_HALNC Length = 427 Score = 344 bits (881), Expect = 5e-93, Method: Composition-based stats. Identities = 139/417 (33%), Positives = 221/417 (52%), Gaps = 41/417 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WRL YR+EGK+K LALG YP++ L ARV RDEAR+L+ANG DP + + Sbjct: 26 LYLFVTPAGGKLWRLDYRFEGKRKTLALGGYPDVNLKQARVYRDEARQLIANGTDPAELR 85 Query: 61 KNDKVE---------------------QSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKS 98 K +K ++ +F+E+ EW SE + ++V+ Sbjct: 86 KAEKTTITESRREEAEAVKIEAMIQAGEALPGSFEEIGDEWVNMYLADKSEKYRNKVINR 145 Query: 99 LEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID- 157 L+ ++ LG +A++ +L ++ +E G +E A R++Q I+RYA+ +G + Sbjct: 146 LKAEVYPYLGRAPVADVTAPMVLKVLQRIEARGIIESAHRVKQNIGQILRYAIATGRREL 205 Query: 158 YNPAQEMAGAVAS--CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSS 215 ++ + A+A ++ H E K I LL + Y G P+TR A+ + +F+R Sbjct: 206 FDVTMALNKAIAPMPKDKNHAAPTEPKDIAPLLRIMAGYRGSPITRAALTIAPCVFVRIG 265 Query: 216 ELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF 275 ELR +W++IDFE W SK H+VPL+ Q +A L +++ Sbjct: 266 ELRHMQWADIDFETFEWRYTA--------------SKTGQEHIVPLARQVVAALIELQPL 311 Query: 276 YGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRD 335 G +F G +PMSENTVN AL+ +G DT+ E+ GHGFR MA + L E + + Sbjct: 312 TGHSRYVFTGARSDTRPMSENTVNGALKRLGIDTQTELTGHGFRAMARTVLEEVHNFRPE 371 Query: 336 AVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE-RFISPFEYAKIN 391 +E Q++H R+ + AY ++ +HLE RR M+Q WAD+LD R+ + + + + Sbjct: 372 VIELQLAHAVRDPLGRAY-NRTKHLETRRKMMQVWADYLDELRDSKNVIQGNFGMVG 427 >UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EQ25_BRASB Length = 407 Score = 343 bits (880), Expect = 6e-93, Method: Composition-based stats. Identities = 155/397 (39%), Positives = 230/397 (57%), Gaps = 25/397 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HLL+ P+G+KYWRL YR+ GKQ+ LALGVYP + L +AR RD+A++ +A +DP K Sbjct: 26 LHLLITPDGAKYWRLAYRWHGKQRTLALGVYPAVGLIEARASRDDAKRSIAADIDPSIVK 85 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K + + TF+ VA EWH K S +A ++L+ LE + F A+G R+IA L+ Sbjct: 86 RERKRAAKIATGNTFEAVAREWHENWKDARSPYYAAQILRRLEADAFPAIGRRSIAALEP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV-ASCNRQHR 176 +LL ++ VE G E A RL+Q I R+A+ +G +P+ ++ A+ A+ Q Sbjct: 146 PELLDMLRKVEKRGVNETARRLKQLVGQIFRFAIVTGRAKRDPSVDLKDALRATGEPQRH 205 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE---IDFEASIWT 233 A+ L +P L K++SY+G T+ A++L L F+R++ELR +W+E +D +++W Sbjct: 206 RAMPLSELPTFLQKLESYSGEQQTKLALKLVTLTFLRTTELRAGKWNELENLDENSALWR 265 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP ER KMR HLVPLS QA+A L++++ G IF M Sbjct: 266 IPAER------------MKMRLEHLVPLSRQAVAALRELRTLSGGSPNIFPSPGKGD-CM 312 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S NT+ AL MGY + HGFR +A + L E+ L++RD +ERQ+SH+ RN VR AY Sbjct: 313 SSNTMLYALYRMGYHGRA--TTHGFRAVASTILNETNLFNRDWIERQLSHVERNEVRRAY 370 Query: 354 IHKAEHLEERRLMLQWWADFLD--VNRERFISPFEYA 388 + AE + +RR M+QWWAD + I P A Sbjct: 371 -NAAEWMPDRRRMMQWWADHITALALEGDKIIPLSRA 406 >UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4I9_9PROT Length = 410 Score = 343 bits (879), Expect = 7e-93, Method: Composition-based stats. Identities = 143/394 (36%), Positives = 208/394 (52%), Gaps = 18/394 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV NG KYWRL YR+ KQK LALG+YP+I+LADAR RR++ARKLLAN DP K Sbjct: 26 LFLLVQINGGKYWRLAYRFADKQKTLALGIYPDISLADARERREQARKLLANDTDPSAIK 85 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K + + +F +A E H W+E HA + + ++E F +G+R +AE++ Sbjct: 86 KETKRILQTATVNSFSALAKELHKVKAPMWTEGHAKQWMLNMEKYAFPVIGDRPVAEIEP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L+ ++ VE G E RL Q ++ +YA+ G YNPA+ ++ Sbjct: 146 LELVGIMRNVEAQGTFETRDRLLQTISSTFKYAIAIGKAKYNPAEIRLALADRPKVENFA 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRW----AIELTLLIFIRSSELRFARWSEIDFEASIWT 233 L IP L D Y R A L LL RSSE+RF++W++ D +A W Sbjct: 206 CLSTDEIPAFLRAFDDYQERGKVSLIAVAAFRLLLLTATRSSEVRFSKWADFDLDAGCWI 265 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP E+ G R H VPLS QA+A+L+ + G + +F + + + Sbjct: 266 IPAEQTGRKGKHGK------RKPHAVPLSDQAIAVLRDLYPVTGHGEHVFPSRNGMGRVI 319 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 SENTVN + MGY K GHGFR++A ++L + G + +E +SH N AAY Sbjct: 320 SENTVNKIIETMGY--KGRQTGHGFRSLARTTLGDMG-HRWEVLEAMLSHALENQTAAAY 376 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERF-ISPFE 386 + + + EERR ++Q WAD+LD + + P Sbjct: 377 V-RTTYFEERRGIMQKWADYLDAVKSGAQVIPLR 409 >UniRef50_B7I6Z3 Site-specific recombinase, phage integrase family n=3 Tax=Moraxellaceae RepID=B7I6Z3_ACIB5 Length = 414 Score = 341 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 131/390 (33%), Positives = 212/390 (54%), Gaps = 23/390 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LL+ N +K+WR Y Y K+ + G YPE++LADAR +RDEAR LLA +DP Sbjct: 32 LYLLIDKNQNKFWRFDYSRPYTKKRNTIGFGSYPEVSLADARSKRDEARTLLAQNIDPQV 91 Query: 59 KKK--NDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 ++K + S+ TF VA EW +K+ + R K L + + +G++ I ++ Sbjct: 92 ERKRVEQEHINSEKNTFAAVAAEWE--SKQDFAESTIRGHKRLLQVINSNIGKKPIDKVT 149 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 ++L + E G+LE A +++ + IMRY V +G + + Q++ GA+ + +H Sbjct: 150 PVEVLNICRIYEKQGKLETAKKVKVKCGQIMRYGVATGRCERDVTQDLRGALKTPKVKHL 209 Query: 177 PALELK-RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 AL ELL ID Y G +T+ A+++ +F+R ELR+A+W +ID E +W Sbjct: 210 SALTESNEFAELLYDIDFYEGTFITQMALKIAPYVFVRPGELRYAKWPDIDLEIDLWRYT 269 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY----GAHDLIFIGDHDSHK 291 P + +K HLVP+ Q +L +IK+ G + +F K Sbjct: 270 PPKTK----------NKTGVQHLVPIPRQVKVLLLKIKELTYDPDGESEYVFPSMTSKLK 319 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 PMSENT+N ALR +GY ++ VCGHGFR A + L E + + +E+Q++H ++ Sbjct: 320 PMSENTINQALRRLGYTSEQ-VCGHGFRASARTILEEVLNYPIEIIEQQLAHKVKDMHGR 378 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRERF 381 AY ++ +HLE+RR M+Q WAD+ D + + Sbjct: 379 AY-NRTKHLEKRREMMQSWADYCDQIKADY 407 >UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae RepID=B9Z434_9NEIS Length = 395 Score = 341 bits (874), Expect = 3e-92, Method: Composition-based stats. Identities = 136/385 (35%), Positives = 212/385 (55%), Gaps = 20/385 (5%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L + P G+K+WR +Y K + +G YP+++LA+AR R+ R L+ G +P + Sbjct: 26 LYLEIRPTGAKFWRYRYWTSPTKDGIYTIGEYPDVSLAEARAERERVRALVKEGKNPTAE 85 Query: 60 KKNDK--VEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 KK DK ++ A T VA EW N WSE + +V K L+ +L GE I E+ Sbjct: 86 KKLDKLRSQKETATTLAVVAEEWKVVNWPHWSETYRKQVEKHLQRDLLDEYGELPIREVT 145 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 + LLA I ++ G +A ++Q +I R+A+ + D +P + GA+ +H Sbjct: 146 SAQLLAAISKIDERGAPSIARLVRQWAGSIFRHAIATLRADSDPTYPLRGALRMPPTRHN 205 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 L +P L +D+Y G LTR A+ L +L +R+ ELR A W+E D +A+ W IPP Sbjct: 206 AHLSADELPGFLKALDAYKGFGLTRLAVNLQMLTLVRTQELRLAEWAEFDLDAAEWRIPP 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 E+ KMR H+VPL QA+AI+++++ G +F + M+ Sbjct: 266 EK------------MKMRDPHIVPLPKQAVAIMRELEPLTGRRRWVFPNVRNHDTGMTNT 313 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+ + ++GY + GHGFR A + L E G W+ D +ERQ++H+ RN V+AAY H Sbjct: 314 TILRVIEILGYKGRA--TGHGFRATASTILHEQG-WNTDIIERQLAHLERNKVKAAYNH- 369 Query: 357 AEHLEERRLMLQWWADFLDVNRERF 381 A +L+ERR MLQ WAD+LD+ R++ Sbjct: 370 AGYLKERREMLQAWADYLDLQRDKK 394 >UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadaceae RepID=B1JDS4_PSEPW Length = 402 Score = 340 bits (872), Expect = 5e-92, Method: Composition-based stats. Identities = 147/383 (38%), Positives = 221/383 (57%), Gaps = 19/383 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G K WRL+YR+EGK KML LG YP +TLA AR RRD ARKLL+ G+DP K Sbjct: 26 LCLEVTTAGGKLWRLRYRFEGKAKMLGLGTYPSVTLAHARERRDAARKLLSQGIDPSAYK 85 Query: 61 KNDKVEQSKAR-TFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + +K T + +A EW+ N +W+ A + L+ LE ++F +G+R AE++ Sbjct: 86 QQEKAAAEAQALTLETLAREWYDYNQPRWAPATASKALQYLESDIFPLIGKRPAAEVQRP 145 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA-GAVASCNRQHRP 177 +L+ ++ +E VA +++Q + I R+ + G++ NPA ++ A + +H P Sbjct: 146 ELVDLVRKIEQREAFNVARKVRQWLSQIFRFGLAKGVVAGNPATDLDVVAAHAPRTRHHP 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + +PELL K+++ ++ AI L LL +R ELR A W E D E++ WTIP Sbjct: 206 HVSEAELPELLEKLEAAQCDFTSKIAIRLLLLTAVRPGELRLAPWDEFDLESATWTIPAA 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R H+VPL QA+ +L+ + + G + L F G +D +PMSENT Sbjct: 266 R------------MKARRPHIVPLPRQAVNLLRALHELTGTYPLAFPGRNDRSRPMSENT 313 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 VN AL MGY+ + GHGFR + +SL G ++RD +ERQ++H ++S+R Y H A Sbjct: 314 VNKALSTMGYEGR--QTGHGFRHLLSTSLNTRG-YNRDWIERQLAHGDQDSIRDTYNH-A 369 Query: 358 EHLEERRLMLQWWADFLDVNRER 380 +LE+RR M+Q WAD +D E+ Sbjct: 370 HYLEQRREMMQTWADHVDALAEQ 392 >UniRef50_B7MX56 Integrase from prophage n=96 Tax=Gammaproteobacteria RepID=B7MX56_ECO81 Length = 419 Score = 339 bits (870), Expect = 8e-92, Method: Composition-based stats. Identities = 122/382 (31%), Positives = 200/382 (52%), Gaps = 22/382 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + LLV P+GSK WR Y K+ +L+ G +++LADAR RR E R L++ G DP D Sbjct: 37 LFLLVKPSGSKLWRFSYYRPSDKKRILLSFGSLEDVSLADARKRRSEYRTLISAGTDPQD 96 Query: 59 KKKNDKVEQS--KARTFKEVAIEWHGTN--KKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 ++ + ++ + TF+ VA W+ + + + + +SL+ +F +G I Sbjct: 97 HERQKRETEARRQGNTFENVAAAWYQVKISQNLAPNTIKDIWRSLDKYVFPFIGNTPIDT 156 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 L R + + ++ G LE R+ QR +M YA SGLID NPA + A S ++ Sbjct: 157 LTARRFVEVLTPIKERGNLETLKRVLQRVNEVMDYAANSGLIDANPAMNVRKAFPSPVKK 216 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H P + +++PEL+ + TR IE LL R +E RW EI+ +A WTI Sbjct: 217 HMPTIRPEQLPELMQALSVSATERQTRLLIEWQLLTVTRPAEASSTRWDEINLDAKQWTI 276 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P R KMR H++PLS QA+A+L+ +K + +F D +PM+ Sbjct: 277 PAGR------------MKMRRDHVIPLSGQAMAVLEAMKPISHHRNYVFPSLKDPQQPMN 324 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 T N+ALR MG+ + HG R + ++ E G + D +E ++H+ N VR AY Sbjct: 325 SQTANAALRRMGFAG--VLVSHGLRAIFSTAANEEG-FEPDVIEAALAHVDTNEVRRAY- 380 Query: 355 HKAEHLEERRLMLQWWADFLDV 376 +++ ++E+R ++++WW +F++ Sbjct: 381 NRSNYIEKRIVLMRWWGEFVEA 402 >UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobacteria RepID=B8GNQ7_THISH Length = 422 Score = 338 bits (866), Expect = 2e-91, Method: Composition-based stats. Identities = 129/380 (33%), Positives = 206/380 (54%), Gaps = 21/380 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P+GSK WR +YR GK + A+G YP+++L AR RD AR+L+ GV P +K Sbjct: 29 LFLYVTPSGSKLWRYRYRLGGKPAIYAIGKYPQVSLEAARTERDRARELVKKGVHPVVEK 88 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + Q TF+ VA W +N +WSE +A +V ++LE+++F +G+ ++ ++T Sbjct: 89 RVNISTQLEKNENTFEPVARRWMASNVQWSEGYADQVKRTLENDVFPKVGKLPVSSIRTA 148 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 L IK V G VA ++Q + I YA L D +P + +V +H P Sbjct: 149 HLRPVIKDVAERGAPTVAILIRQLCSQIFAYAAGEELCDSDPTALLKRSVKRPRVRHHPP 208 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L + IP+ L+++D G +T A+ L L ++R++ELR A WSE D ++++WT+P R Sbjct: 209 LPWQEIPKFLSRVDDA-GYRVTVIALRLMALTYVRTAELRKAHWSEFDLDSAMWTVPAGR 267 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 KMR H+VPLS QA+ +LK++ G ++F G MS T+ Sbjct: 268 ------------MKMRDPHIVPLSKQAIVLLKELHTLTGGGKVLFPGFRKPGTVMSATTL 315 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSH--MARNSVRAAYIHK 356 N L MGY + HGFR+ A + L + + V+ Q++H ++S RA Y H Sbjct: 316 NKVLERMGYGGQ--FSSHGFRSTATTLLG-LLSYPENRVDLQLAHSKRKKDSSRAPYDH- 371 Query: 357 AEHLEERRLMLQWWADFLDV 376 +++ R++++Q WAD LD Sbjct: 372 TKYIASRKIIMQDWADILDA 391 >UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobacteria RepID=A1WW57_HALHL Length = 412 Score = 337 bits (863), Expect = 6e-91, Method: Composition-based stats. Identities = 131/385 (34%), Positives = 207/385 (53%), Gaps = 23/385 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYE-GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 + LLV NG K W+ +YR G++ + LGVYP++ L+ AR RRDEAR LLA+G+DP D+ Sbjct: 33 LVLLVKSNGGKQWQFRYRRPSGREATMGLGVYPDVPLSKARERRDEARALLADGIDPIDQ 92 Query: 60 KKNDKVEQSKART--FKEVAIEWHG--TNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 +K + + A T F+ VA EW K HA+R L+ LE F LG R ++ + Sbjct: 93 RKAQRSAAASADTHSFEAVAREWWDAVHRHKVVASHANRNLRRLEQYAFPKLGRRPVSAI 152 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + D+L ++ +E +E A R++ + RYA+ +G +P ++ G + S +H Sbjct: 153 EPPDVLEALRRIEALEHVETAHRVKTLIGQVCRYAIATGRGSRDPTADLRGMLRSPKTRH 212 Query: 176 RPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 PA E + LL ID Y G+P TR A++L ++F R ELR A W D + W Sbjct: 213 LPAITEPAELGPLLRAIDGYRGQPTTRAALQLAPIVFCRPGELRAAEWQAFDLSSGTW-- 270 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 ++ SK + PL QA++IL++++ + +F +P+S Sbjct: 271 ------------DYQPSKDGDPLVTPLPRQAISILRELEPISRSSRYLFPSGRTPDRPIS 318 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 +NT+ +AL+ + Y + + HGFR A + LVE W + VE Q+ H R++ AY Sbjct: 319 DNTLTAALKRLDYGGR--MVAHGFRAAARTILVERLGWGIEIVEMQLGHRVRDAHGRAY- 375 Query: 355 HKAEHLEERRLMLQWWADFLDVNRE 379 ++ + +E+R +MLQ WAD+LD RE Sbjct: 376 NRTQWIEQRGVMLQQWADYLDELRE 400 >UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteriaceae RepID=B7N6K6_ECOLU Length = 415 Score = 337 bits (863), Expect = 6e-91, Method: Composition-based stats. Identities = 119/389 (30%), Positives = 199/389 (51%), Gaps = 24/389 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LLV +G K W +Y + K+ +LG YP +TLA AR R + R+LL G+DP Sbjct: 31 LYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMARETRTKYRRLLWQGIDPRQ 90 Query: 59 KKK--NDKVEQSKARTFKEVAIEWHGTNKKWS---EDHAHRVLKSLEDNLFAALGERNIA 113 ++ T ++VA +W K+ S EDHA V +SLE ++F +LG + Sbjct: 91 HLAGIAEEKRLQNECTLEKVAEQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGSTPVT 150 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 E++ + L + +E G LE R+ R I R+A+ LI++NPA + + Sbjct: 151 EIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKK 210 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 Q+ PAL + L+ + + + R TR IE LL ++R E ARW +ID + + W Sbjct: 211 QNMPALPPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWR 270 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP KM +H VPLS QAL +L+ ++ +F + M Sbjct: 271 IP------------DTFMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHM 318 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 + T N+AL MG+ E+ HG R++A ++ G + R+ +E ++H + + AAY Sbjct: 319 HQQTANAALIRMGFGG--ELVAHGMRSIARTAGA--GHFPREVLESALAHQKEDEIEAAY 374 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERFI 382 +++++LE+RR ++QWW +++D R + + Sbjct: 375 -NRSDYLEQRRPLMQWWGNYVDAARRQAL 402 >UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammaproteobacteria RepID=A7ZQ61_ECO24 Length = 436 Score = 336 bits (862), Expect = 8e-91, Method: Composition-based stats. Identities = 130/393 (33%), Positives = 207/393 (52%), Gaps = 25/393 (6%) Query: 1 MHLLVHP---NGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVD 55 + L + P G K W +Y K+ ++LG YP +TLA AR RDE LL NG+D Sbjct: 58 LLLRIAPLAKGGKKNWYFRYAVPVTKKRTKVSLGTYPHLTLAKARALRDEYLSLLTNGID 117 Query: 56 PGDK--KKNDKVEQSKARTFKEVAIEWHGTNKKWS---EDHAHRVLKSLEDNLFAALGER 110 P +K + ++ + TF+ VA +W K S +DHA+ + +SLE N+F+ LG+ Sbjct: 118 PQVHNNQKANALKDATEHTFQAVAKKWLDEKVKTSGISQDHANDIWRSLERNIFSTLGDT 177 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 I E++ + L ++ +E G LE R+ R I RYA LI++NPA + + Sbjct: 178 PIKEIRPKMLKQHLEPIEKRGVLETLRRIISRLNEIFRYAATEELIEFNPADNLGQRFSK 237 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 +Q+ PAL +P L +++ + R TR IE LL ++R E RWS+ID E Sbjct: 238 PKKQNMPALPPSELPRFLVALNNASIRLETRLLIEWQLLTWVRPGEAVRTRWSDIDIETG 297 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +W IP E KM+ H VPLS +AL +L +K G + +F Sbjct: 298 MWNIPAE------------FMKMKKPHKVPLSKEALRVLDLMKVISGHREWVFPSIKAPL 345 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 M E T N+A+ MG+ E+ HG R++A ++ ESG + D +E ++H ++ + Sbjct: 346 NHMHEQTANAAIIRMGFGG--ELVAHGMRSIARTAAEESGKFRTDVLEAALAHSKKDEII 403 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDVNRERFIS 383 AAY ++AE+L ER +++QWW+D++ + + I+ Sbjct: 404 AAY-NRAEYLTERVVLMQWWSDYVSSQKCKVIA 435 >UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobacillus minor 202 RepID=C8KXV2_9PAST Length = 406 Score = 336 bits (862), Expect = 9e-91, Method: Composition-based stats. Identities = 120/389 (30%), Positives = 202/389 (51%), Gaps = 22/389 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L+V P GSK WR Y K+ +ALG+YP ITL+ AR RDE + LLANG+DP + Sbjct: 31 LFLIVSPTGSKSWRFNYYRPISKKRAKIALGMYPAITLSKARALRDEYKHLLANGIDPQE 90 Query: 59 KKKNDKVEQS--KARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K ++++ K T +A +W + + E + LE +F LG+ I+E+ Sbjct: 91 HCKQLELQKLQFKQNTLFAIAEKWKQKKETEVKEKTLKPRWRMLEKYIFPELGDLPISEI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA-SCNRQ 174 L I+ V G + Q IM +AV G+I++N +A + Sbjct: 151 SPLRLSNTIRPVFDRGIANTGLVIIQMVNEIMVFAVNLGIIEFNKCSNVASTFNVKKTTK 210 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H+P + +++PE ++ + + + IE +LL +R +E A+W EI+F+ ++W I Sbjct: 211 HQPTIRPEKLPEFMSALRDSAVDLVVKLLIEFSLLTMVRPNEAANAKWDEINFDDALWHI 270 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P ER KM+ VPLS+QA+ +L ++KQ G IF KPMS Sbjct: 271 PAER------------MKMKKAFTVPLSSQAIKLLNKLKQITGRSRFIFQSPRAPQKPMS 318 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-WSRDAVERQMSHMARNSVRAAY 353 T N+A+R +GY+ K + HG R++A + L E + + + +E +SH +N +R AY Sbjct: 319 SVTANAAIRRIGYNGK--LTSHGLRSIASTYLSEKFIDINVEIIEACLSHQGKNPIRNAY 376 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERFI 382 +++ +LE+R+L++ W F++ + + + Sbjct: 377 -NRSTYLEQRKLLMADWGQFVEESMKSSL 404 >UniRef50_Q167M4 CP4-like integrase, putative n=40 Tax=Alphaproteobacteria RepID=Q167M4_ROSDO Length = 409 Score = 336 bits (861), Expect = 9e-91, Method: Composition-based stats. Identities = 139/384 (36%), Positives = 209/384 (54%), Gaps = 18/384 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++LV PNGSK W+++YR +G++K L++G YP ++L AR RD AR ++ANG DP ++K Sbjct: 40 LYVLVKPNGSKLWQMKYRLDGREKTLSIGAYPAVSLQQARKSRDAARSMIANGEDPSEEK 99 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAA-LGERNIAELKT 117 + K ++ +TF+++ + +K + A + L G++ I + Sbjct: 100 QEQKRLKREASGQTFEKIGGMFLDKQRKEGKSKATLDKTAYHLKLANHDFGKKPITAITA 159 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L ++ VE G E A RL+ R ++ RYAV SGL + +P + A+ RQHR Sbjct: 160 PMILRTLRKVEAKGNYETAHRLRARIGSVFRYAVASGLAETDPTYALRDALIRPTRQHRA 219 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A + LL +ID + G+ TR A++L L+ R ELR A+WSE D +W IP Sbjct: 220 AITDPTAFGALLREIDVFDGQVTTRIALQLLALLAQRPGELRHAKWSEFDEADKVWAIPA 279 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 + KMR H VPL+ QA+ +L +++ G + +F H+PMSEN Sbjct: 280 GK------------MKMRRDHFVPLADQAITLLNELRPLTGESEYLFPSLRSWHRPMSEN 327 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+N+ALR MGY E+ HGFR + ESGLW+ DA+ER ++H RN VR AY + Sbjct: 328 TMNAALRRMGYSGD-EMTAHGFRATFSTLANESGLWNPDAIERALAHEERNEVRRAYA-R 385 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 H EER + WWA LD R Sbjct: 386 GAHWEERVKLSDWWAGRLDDFRSS 409 >UniRef50_Q3SHC8 Probable cp4-like integrase protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHC8_THIDA Length = 425 Score = 336 bits (861), Expect = 9e-91, Method: Composition-based stats. Identities = 154/386 (39%), Positives = 218/386 (56%), Gaps = 22/386 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV+ G KYWR+ YR+ GK+K LALGVY +++LA AR +RD+AR +LA+G DPG+++ Sbjct: 42 LYLLVNQAG-KYWRMDYRFLGKRKTLALGVYSDVSLARARQKRDDARAMLADGTDPGEQR 100 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTN--KKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 K K + ++A +F+ VA EWH +KW++ A + + LE +F +G IA +K Sbjct: 101 KETKRANQAAQANSFEAVAREWHAMKLKRKWTQSTADKTMAQLEAYVFPEMGHLPIASVK 160 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 LLA ++ VE G A RL++ I RY V +G + NPA + GA+ HR Sbjct: 161 ASQLLAMLRKVENRGIAYTAVRLREVCGQIFRYGVATGRAEDNPAAHLLGALHKPEVNHR 220 Query: 177 PALELKR-IPELLTKIDSYTGRP-LTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 PA+ +R L + TG +TR A LL F+R+ E R+A+W EID++A W + Sbjct: 221 PAITDRRGFGAFLRDLREATGYDAVTRHAAYFALLTFVRAQEFRYAKWEEIDWQAKEWKV 280 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH--DSHKP 292 P +R + K H VPLS QALA+L ++K G +F + Sbjct: 281 PAKR---------MKTGKALPAHTVPLSQQALALLTELKNLTGHSPYLFPKVKGYGDAEV 331 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 +SENTV L MGY + C HGFR A S L E G WSR+A+ERQ+ H +S AA Sbjct: 332 ISENTVGKMLNKMGYQGR--QCVHGFRASARSILSEQG-WSREAMERQLDHKETDSTVAA 388 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNR 378 Y ++EHL ERR M+Q WAD D Sbjct: 389 YA-RSEHLPERRNMMQAWADTCDALE 413 >UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QA94_PSYCK Length = 413 Score = 336 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 125/376 (33%), Positives = 209/376 (55%), Gaps = 18/376 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G K W YR++GKQ+ L +G YP ++L +AR R E ++L+A+GV+P D K Sbjct: 32 LQLWVRYTGVKSWISAYRWQGKQQTLTIGTYPVMSLQNARQRNIEIKRLIADGVNPKDHK 91 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K + Q F +A W+ K + +E R + ++ ++G++NI ++ D Sbjct: 92 KEQQASQDGLNIFDNIAQSWYAERKTYLAESTFTRNYSAYMRDVKPSIGQKNINDITAPD 151 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +LA KAVE G E+A R + I ++A+++GL +NPA ++A A+ + + Sbjct: 152 ILAIGKAVESRGANEMARRTIREVGQIFKHAIRNGLATHNPATDLAEAIKPHKTTNHHRI 211 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 +++P+LLT I++Y G L + + F+R++E+RF WSEID++ +W IP ++ Sbjct: 212 TSQQLPKLLTDINAYQGDVLVKLGLWFLCYTFVRTNEIRFMEWSEIDYKHGLWRIPADK- 270 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 K + H+VPL+ QA+AIL+QIK+ + +F P S++ Sbjct: 271 -----------MKAKRLHIVPLAPQAMAILEQIKELGFSDQYVFFNTSTRK-PYSQSAFI 318 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 +AL MGY K + GHGFR +A ++L E + +A+E Q++H N + AAY + A+H Sbjct: 319 NALWNMGYKGK--MTGHGFRGLASTTLHEK-EFMHEAIELQLAHDRENKISAAY-NGAQH 374 Query: 360 LEERRLMLQWWADFLD 375 L R M+ WA+F+D Sbjct: 375 LPYRIDMMHQWANFID 390 >UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL52_9BACT Length = 378 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 128/381 (33%), Positives = 205/381 (53%), Gaps = 32/381 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + P G K W+++++ +G++ LG YP+I+L +AR++RDE R L N Sbjct: 26 LWLEITPAGKKTWKVRFKAQGREIKHTLGRYPDISLKEARLKRDEIRLELVN-------- 77 Query: 61 KNDKVEQSKARTFKEVAIEWHGTN--KKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + TFK +A EW + HA + L+ + LG++ A++ Sbjct: 78 ----HKSVPEGTFKALAEEWFERQVVPVRTHGHARTIRSRLDRLILPYLGDKPPADIDAP 133 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 +LLA ++ +E G +E A R+ Q ++RY + +G ++ ++ GA+ +H P Sbjct: 134 ELLAILRRIEDQGHVETAHRVSQIVGQVLRYGIATGQARHDITADLKGALIPRKPEHFPT 193 Query: 179 -LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + K+I L+ I +++G + R A+ + +R E+R A W EID +W IP E Sbjct: 194 LTDPKKIGGLMRAIQAFSGSVVVRCAMLFQIYTAVRPGEMRKAEWKEID--GDLWKIPAE 251 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R HLVPLS+QA+ +L++I+ G +LIF +P+S+ T Sbjct: 252 R------------MKKRRPHLVPLSSQAIGVLEEIRPLTGGGELIFPSVRSKTRPISDMT 299 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 VN+ALR MGY + E+ GHGFR M + E W + +E Q++H+ +NSVRAAY H A Sbjct: 300 VNAALRRMGY-AQNELTGHGFRAMFSTIANEC-QWPSNVIELQLAHVDKNSVRAAYNH-A 356 Query: 358 EHLEERRLMLQWWADFLDVNR 378 E L++RR +LQWW D+LD R Sbjct: 357 ELLDKRRELLQWWGDWLDGVR 377 >UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomonas eutropha C91 RepID=Q0AH02_NITEC Length = 393 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 140/381 (36%), Positives = 216/381 (56%), Gaps = 21/381 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LL++P+GSK+WR +Y + K+ ML+LG YPE TLA AR D + +L G++P + Sbjct: 26 LTLLIYPDGSKHWRYRYLFNEKESMLSLGKYPETTLAQARSIHDGYKAILKQGINPSTHR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K + S +F+ VA W K +E H L+ +E ++F +G + + L Sbjct: 86 KEEKRKAIVSVENSFEAVARTWWMHWKHAKTERHVAYTLRRMEADIFPFIGAKPVNTLTA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA--VASCNRQH 175 + + V+ G L++A R+ +MRYAVQ GL + NPA ++ A + + + Sbjct: 146 MHFIELVYKVQSRGALDIAKRVLTMCGQVMRYAVQHGLSERNPAADIKPADILKKRKKVN 205 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 + +P+LL KI+ Y G+PLTR A++L L FIR+SEL RW EI F+ + W IP Sbjct: 206 HKRIPESELPDLLQKINQYDGQPLTRLALQLMTLTFIRTSELIGGRWEEISFDNAEWRIP 265 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 PER KMR+ H+VPLS QA+ +L++IK L+F + + K MS Sbjct: 266 PER------------MKMRSQHIVPLSDQAITVLREIKALNSDPVLLFPSERRNGKTMSN 313 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 NT+ AL +GY K + GHGFR +A + L E + +E Q++H R+ V AAY H Sbjct: 314 NTIIYALYRIGY--KGRMTGHGFRGLASTVLHEK-NFDHKWIELQLAHAERDEVSAAYNH 370 Query: 356 KAEHLEERRLMLQWWADFLDV 376 A +LE+RR M+QWW +++++ Sbjct: 371 -ALYLEQRRKMMQWWGEYIEM 390 >UniRef50_A1SRI6 Phage integrase family protein n=2 Tax=Alteromonadales RepID=A1SRI6_PSYIN Length = 416 Score = 335 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 115/388 (29%), Positives = 193/388 (49%), Gaps = 21/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L + PNGSK W+L++ E K ++ G YP I+LA+AR R+ A +LLA G++P Sbjct: 30 LQLRIKPNGSKLWQLRFNKPIEKKPALMGFGAYPAISLANARKLREAANELLAQGINPKA 89 Query: 59 KKKNDKVEQSKA--RTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++ ++ E+ TF+ V W D + +L +++ +G+ I E+ Sbjct: 90 QRDSEIKEKELILNNTFEMVTAAWIKLKASEVKPDSLKTISTTLTNHILPRIGKCPITEI 149 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + ++ +E G EV AR Q IMRYA G+I NP + G + + Sbjct: 150 TAPMAIEALRPIEAKGNHEVIARACQYLNQIMRYATNLGMIHSNPLTGIKGVFMTKKITN 209 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 P ++ + +P+LL I + + +TR I L R +E A+W+EID+E ++W IP Sbjct: 210 NPHVKPEELPQLLMAIATANIKKITRNLILWQLHTMTRPAETALAQWNEIDYENNLWIIP 269 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 ER K TH +PL+ Q LAIL+ K G D IF D + + ++ Sbjct: 270 GERI------------KTGMTHQIPLTVQTLAILEACKVISGNSDYIFPADRNPNAHANK 317 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 + N A + MGY + HG R +A ++L + G+ + + E +SH NSV +Y H Sbjct: 318 ASANMAFKRMGYQGR--QTAHGLRGLARTTLSDKGV-AYEPSEACLSHKVGNSVSQSYNH 374 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFIS 383 + +L +R ++ WW+++++ IS Sbjct: 375 -STYLNQRIKIMAWWSNYIEEASYGNIS 401 >UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F555_HAEPS Length = 405 Score = 333 bits (853), Expect = 9e-90, Method: Composition-based stats. Identities = 116/388 (29%), Positives = 190/388 (48%), Gaps = 21/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + LLV GSK WR Y K+ +ALG+YP + L+ AR RDE +KLLA+ +DP Sbjct: 31 LFLLVSITGSKSWRFNYYQPITKKRTKMALGMYPTVNLSKARALRDEYKKLLADDIDPQQ 90 Query: 59 KKKNDKVE--QSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 KN + E Q TF +A +W + + LE F LG +I + Sbjct: 91 YIKNKQQEKLQETQNTFLAIAEQWKQKKSAEIKPATLKNHWRRLELYAFPTLGNISITMI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 K + + + + G L Q IMR+AV G+I++N ++A +H Sbjct: 151 KPLQVTELVTPLFLRGVNSTGVLLLQTINEIMRFAVNRGIIEFNKCADIADTFVKSKSEH 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 P + + +PE + + + + IE +LL R SE A+W+EIDFE S+W IP Sbjct: 211 HPTIRPEHLPEFFAALRNSHADLIIKSLIEFSLLTIARPSEAANAKWAEIDFEQSLWNIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 ER KM+ +PLS QA+ ILK+++ G IF +P+ + Sbjct: 271 AER------------MKMKQPFTIPLSIQAVKILKKLQVITGRSLYIFQSIKKPSQPIGK 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-WSRDAVERQMSHMARNSVRAAYI 354 N+ ++ MGY K + HG R++A + L E + + + +E +SH ++N VR AY Sbjct: 319 QIANNTIKQMGYKGK--LTSHGLRSIANTYLSEKFIDLNVEIIEACLSHKSQNQVRNAY- 375 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFI 382 +++ +LE+R+ ++ W F++ + + + Sbjct: 376 NRSTYLEQRKPLMNDWGQFVEESMKSSL 403 >UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomonas RepID=A5W5R9_PSEP1 Length = 393 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 123/378 (32%), Positives = 197/378 (52%), Gaps = 20/378 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G K W ++ + GKQ ++LG YPEI L +AR RRDEAR+ +A G DP + + Sbjct: 26 LTLYVAETGVKSWHFRFTWLGKQARISLGTYPEIGLKEARARRDEAREDVAQGKDPRESR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + KVE+ +K RTF+ V EW K +E + ++E ++ A G R I +K Sbjct: 86 REKKVERLGAKERTFRRVYEEWLEFRKGGLTESTVKVISNAMELDVLPAFGLRQIDSIKR 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS-CNRQHR 176 D++ I+ +E G + A + +Q + RYAV G+I+ NP EM ++R Sbjct: 146 ADVITLIRRIERRGSITTAVKTRQWIGQVFRYAVAIGMIEINPTAEMHAVTEKMAPHKNR 205 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 P L +P ++ I+ + A +L +L R +E+R A WSEID + + W+IP Sbjct: 206 PFLAFTEMPAIIKAIEESQSGLQLQCATKLLILTACRPAEVRKAEWSEIDLDTATWSIPA 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 + KMR H+VPLS QA+ +L+ + G +F D+ +P+ N Sbjct: 266 SK------------MKMRRDHVVPLSRQAVELLRSMLPISGGLKYVFPNRTDAVRPIGIN 313 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 + L GY + HGFR + + + G +++D +ERQ++H +++R Y H Sbjct: 314 YAVNLLDRCGYTGR--QSPHGFRHLFSTEMNSRG-YNKDWIERQLAHADSSAIRDVYNH- 369 Query: 357 AEHLEERRLMLQWWADFL 374 A +LE+RR M+Q WAD + Sbjct: 370 ATYLEQRRDMMQAWADLV 387 >UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacteria RepID=B0RRY6_XANCB Length = 409 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 139/396 (35%), Positives = 215/396 (54%), Gaps = 26/396 (6%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LL+ P+G+++WR YR GK+ L+ G YPE++LADAR R EAR+L+A +DPG+ Sbjct: 26 LYLLLRPDGARWWRYDYRRPVTGKRNTLSFGTYPEVSLADARERLAEARRLVAAKIDPGE 85 Query: 59 KKKNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++K K A +F+ VA EW K+WS +A ++++ L+ ++F +G IA + Sbjct: 86 QRKAVKAAGEAAAANSFEVVAREWFAKQQKEWSPQYAEKIIRRLQSDIFPWIGSSPIAAI 145 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 +LL ++ +E G +E A R Q A+ RYAV++G + +P + GA+ Sbjct: 146 TAPELLKHLERIEQRGAIETAHRALQTCGAVFRYAVRTGRAEADPTGALKGALTPWRSMP 205 Query: 176 R-PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 A + +L KID T RP+ R A+ L L+F R EL RW+E+D +A W Sbjct: 206 FAAATTSEEATTVLRKIDISTSRPVVRSALRLAPLLFARPGELVRMRWTELDLDAGQWR- 264 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 + +K + TH+ LSTQA+ IL+ + G + +F G D K MS Sbjct: 265 -------------YFVTKTKRTHIAALSTQAIEILRDLHPLTGRGEFVFPGGRDPRKHMS 311 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 N + A R G + K E HGFR MA + L E G W+ DA+E ++H VR Y Sbjct: 312 GNAILVAARRCGIE-KDESTIHGFRHMASTLLNEMGHWNPDAIESALTHK-MPGVRGIY- 368 Query: 355 HKAEHLEERRLMLQWWADFLDVNR---ERFISPFEY 387 ++A++L+ERR M+Q WAD LD + + PF++ Sbjct: 369 NQAQYLDERRKMMQSWADNLDTLKADAANKVVPFKH 404 >UniRef50_Q0I4F8 Integrase n=1 Tax=Haemophilus somnus 129PT RepID=Q0I4F8_HAES1 Length = 413 Score = 332 bits (851), Expect = 1e-89, Method: Composition-based stats. Identities = 123/379 (32%), Positives = 199/379 (52%), Gaps = 19/379 (5%) Query: 1 MHLLVHPNGSKYWRLQYR-YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++LLV NGSK WR Y K+K+++LG YPE +L DAR +RDE R LLA ++P D Sbjct: 31 LYLLVKSNGSKLWRFNYYDLLKKRKLISLGSYPETSLLDARTKRDEYRALLAKDIEPQDY 90 Query: 60 --KKNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 K+ ++ ++ T VA +W K D + LE +LF LG I+++ Sbjct: 91 IFKQKEQAIFNQCNTLIGVAKDWREMKSSKVEADTMKDQWRLLELHLFPHLGNMPISDIT 150 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 ++ + + E+ ++ + IMR+AV +GLI +NP + S QHR Sbjct: 151 APFTRMKLQKLADDKKFEMLKKVIRGLNEIMRFAVNAGLIQFNPTANLQELFPSGEVQHR 210 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 P++ ++P+ L ++ + TR +E LL +R SE W EIDFE W IP Sbjct: 211 PSIHPDKLPKFLESVNKANIQLQTRCLLEWQLLTMVRPSEAAGTMWREIDFENKTWLIPK 270 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +R + +HLVPLS QA+ IL ++ G D +F + D MS Sbjct: 271 DRMKGK-----------KRSHLVPLSQQAINILNIMRPITGNCDFVFPKNGDLTTNMSSE 319 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+N ALR MGY +C HGFR++A ++L E+ ++ + +E +SH+ + VR AY + Sbjct: 320 TINKALRKMGYQG--ILCAHGFRSIASTALNEN-EFNVEIIEALLSHVKGDKVRTAY-DR 375 Query: 357 AEHLEERRLMLQWWADFLD 375 + + +++R ++WW +F++ Sbjct: 376 STYEKQKRQYIEWWGNFVE 394 >UniRef50_Q0C1T8 Site-specific recombinase, phage integrase family n=2 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C1T8_HYPNA Length = 409 Score = 332 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 138/375 (36%), Positives = 204/375 (54%), Gaps = 18/375 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + V PNGSK WR Y+++GKQK++ALG YPEI+LA AR +R EAR LL G+DP + Sbjct: 40 LFIEVRPNGSKLWRFAYKFDGKQKLMALGTYPEISLARAREKRAEARALLIEGIDPMQQA 99 Query: 61 KNDKVEQSK--ARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNL-FAALGERNIAELKT 117 K +K+E+ TF +A E N++ A KS + A LG+ + ++K Sbjct: 100 KVNKLERQALTEHTFSAIAAELLDKNRREGLAGATLSKKSWLVGIANADLGDLPVTQIKP 159 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L P++ VE G E A RL+ + + RYAV + +++P + GA+ + HRP Sbjct: 160 THVLVPLRKVESEGNYETARRLRAVISQVFRYAVATARAEHDPTAGLRGALIAPKVTHRP 219 Query: 178 ALELKR-IPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ + L+ I +Y G T+ ++L L++ R ELR + W E D WTIP Sbjct: 220 AIVDREKFAGLIRSIWAYDGAIETKAGLQLMALLYPRPGELRLSTWGEFDLRKRTWTIPA 279 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 R +KMR H PLS A+ ILK++ G + + KP+SEN Sbjct: 280 AR------------TKMRREHKKPLSGAAVEILKRLHAVTGHEPYVLVSQLSRGKPISEN 327 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+N +LR +GY K E+ HGFR A S L ESG W DA+E +++HM + +R AY H+ Sbjct: 328 TLNGSLRRLGY-AKEEMTSHGFRASASSLLNESGKWHPDAIEAELAHMGADQIRKAY-HR 385 Query: 357 AEHLEERRLMLQWWA 371 A + ++R M WWA Sbjct: 386 ATYWDQRVEMADWWA 400 >UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophilus influenzae RepID=Q4QNN7_HAEI8 Length = 403 Score = 331 bits (848), Expect = 3e-89, Method: Composition-based stats. Identities = 113/388 (29%), Positives = 196/388 (50%), Gaps = 21/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L++ P GSK WR Y K+ ++LG+YP ITL+ AR R++ R+LLAN +DP + Sbjct: 31 LFLIISPTGSKSWRFNYYRPITKKRAKISLGLYPAITLSKARELREQYRQLLANKIDPQE 90 Query: 59 KKKNDK--VEQSKARTFKEVAIEWHGTNKKWSED-HAHRVLKSLEDNLFAALGERNIAEL 115 K + Q + TF ++ +W + ++LE F LG+ IAE+ Sbjct: 91 YIKQHELLQLQRQNNTFFAISTQWKQKKVSEIKSVTLKSRWRTLEKYAFPYLGDNPIAEI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + L + + G + IM +AV G+I++N ++ A H Sbjct: 151 TPQQLHDTVIPLFERGVSHTGKLVIALVNEIMNFAVNKGIIEFNKCINVSKAFNVNRTTH 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 P + +++PE ++ + + ++ IE +LL R SE A+W+EIDFE S+W IP Sbjct: 211 HPTIRPEKLPEFMSALRHSHIDLMVKYLIEFSLLTITRPSEAANAQWNEIDFEKSLWNIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 ER KM+ +PLS Q L IL ++K G IF +P+ Sbjct: 271 AER------------MKMKKAFTIPLSLQVLKILNKLKNISGRSRFIFQSQRYPERPLHS 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVES-GLWSRDAVERQMSHMARNSVRAAYI 354 ++ N+A++ +GY K ++ HG R++A + L E+ + + +E +SH ++N VR AY Sbjct: 319 SSANAAIKRVGY--KDQLTSHGLRSIASTYLSETFTEMNLEILEACLSHQSKNQVRNAY- 375 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFI 382 +++ +LE+R+ ++ W DF++ ++ I Sbjct: 376 NRSTYLEQRKPLMNAWGDFVEECMKKSI 403 >UniRef50_A9I0E1 Phage-related integrase n=5 Tax=Burkholderiales RepID=A9I0E1_BORPD Length = 536 Score = 330 bits (847), Expect = 4e-89, Method: Composition-based stats. Identities = 124/389 (31%), Positives = 208/389 (53%), Gaps = 16/389 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V G K W +Y + K L +G YPE+TLA AR + EA ANG+DP + + Sbjct: 126 LYLRVRITG-KAWIYRYMKDSKPIKLGMGPYPEVTLAQARTKAYEANSQRANGLDPKEVR 184 Query: 61 KN--DKVEQSKARTFKEVAIEWHGTNKK---WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + ++ ++ TF+ +A WH + KK WSE +A +V++ LE ++F +G + I + Sbjct: 185 EQLAEQTRIARLHTFELLARAWHASAKKDREWSEGYAQKVIRHLEIHIFPWVGHKPIEMI 244 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID--YNPAQEMAGAVASCNR 173 +++ + + G LE A R+++ + +YAV G ++ N + G + Sbjct: 245 LPTEIVRCLHRPKDRGNLETAQRVREAVQHVYQYAVDVGALEPSKNFVNKNTGGLPPPRS 304 Query: 174 QHRPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 +H A E ++ +LL I SY G+ +TR A+ L ++F R ++R A W +I E +W Sbjct: 305 RHFAAITEPAQLGQLLRDIRSYHGQFITRCALRLAPMMFQRPGQIRLADWEDISLEVELW 364 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG---DHDS 289 PPE+ + + + H+VPL QAL IL+++ G +F + Sbjct: 365 RCPPEKMKMREWQKRDSRT---PAHIVPLPRQALEILRELHPLTGPTGPVFRSMSRRSEK 421 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 + +S+NT+N+ALR MGYDTK E+ GHGFR A + + E W D +ER ++H + + Sbjct: 422 SRYISDNTINAALRTMGYDTKEEITGHGFRATARTMIREHLGWEPDVIERHLAHTSDEEL 481 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNR 378 ++Y +A + +R+ M+Q WADFLD Sbjct: 482 GSSY-DRAAFIAQRKAMVQQWADFLDELE 509 >UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammaproteobacteria RepID=A0KW55_SHESA Length = 411 Score = 330 bits (847), Expect = 4e-89, Method: Composition-based stats. Identities = 119/379 (31%), Positives = 180/379 (47%), Gaps = 22/379 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V G K W +Y K LG YP+++LA+AR + EARK LA G+DP Sbjct: 31 LYLYVRTAG-KTWEFRYIRPSTSKPTYFGLGSYPDVSLAEARDKALEARKNLAEGIDPQL 89 Query: 59 KKKNDKVEQS--KARTFKEVAIEWHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAEL 115 K +K++ + A+T K +A W + + + LE F LG I+ L Sbjct: 90 LKVENKLKAATENAQTLKHIAQMWMDSKQGSIKPKTIEGNWRKLELYAFPKLGSIAISRL 149 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 +A +K +E G LE R Q IM ++V SG I NP + +H Sbjct: 150 TAPIAIAALKPLEQKGHLETVKRTAQLLNEIMNFSVNSGYIHANPLSGIREVFRKSKVEH 209 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 AL+ + ELL I + TR IE L R +E ARW EIDF+A +WTIP Sbjct: 210 LKALKPAELAELLQTIANANLLLTTRCLIEWQLHTMTRPNEAAGARWEEIDFDAKLWTIP 269 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R KM H++PL+ L IL+ +K +F D K Sbjct: 270 ESR------------MKMNREHIIPLTEHTLTILETVKPISEQSQFVFPSSKDPQKHTDP 317 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T+N AL MG + GHG R++A ++L E G + D +E ++H+ +N +R+AY + Sbjct: 318 ETINKALGRMGLKGRT--TGHGLRSLASTTLNEQG-FDGDVIEAALAHVDKNQIRSAY-N 373 Query: 356 KAEHLEERRLMLQWWADFL 374 + +LE R +++WW++ + Sbjct: 374 RTTYLERRTKLMEWWSNHI 392 >UniRef50_B9NUX0 Site-specific recombinase, phage integrase family n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NUX0_9RHOB Length = 404 Score = 330 bits (847), Expect = 4e-89, Method: Composition-based stats. Identities = 142/383 (37%), Positives = 211/383 (55%), Gaps = 18/383 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++LV PNGSK+W L YR+ GKQK+++ G YP I+L +AR +RD RK L G+DP K Sbjct: 26 LYILVKPNGSKHWHLHYRFLGKQKVMSYGPYPLISLKEAREKRDRDRKFLIEGIDPMVVK 85 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K E+++ F +A E N+ + + + L + L + + E+ Sbjct: 86 KERKLASERAQRGRFDILAAELLEKNRVEGRAEQTLKKKAWLVEMANKDLAKLAVMEITP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 D+LA +K E +G LE A+RL+ + RYA+ GL + +P + GA+ + R Sbjct: 146 SDVLAVLKKQEKAGNLETASRLRTTIGEVFRYAIACGLTENDPTIPLKGALVQKRPRSRS 205 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A +R+ ELL I++Y+G + + L L+ +R ELRFA+W E D EA WTIP Sbjct: 206 AITNPERLGELLCSIENYSGYRVVALGLRLLALLHVRPGELRFAKWEEFDLEAGKWTIPA 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER KMR H+ PL TQA+ IL+++++ ++ P+SEN Sbjct: 266 ER------------MKMRQPHVAPLPTQAIDILRELQRISHPDGMVLPSQRRRIDPLSEN 313 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T N ALR+MGY +K E+ HGFR + ESG W+ DA+ER ++H+ N VR AY ++ Sbjct: 314 TFNKALRMMGY-SKEEMTAHGFRATFSTLANESGEWNPDAIERALAHVDSNEVRRAY-NR 371 Query: 357 AEHLEERRLMLQWWADFLDVNRE 379 A EER M QWWAD L+ + Sbjct: 372 AAFWEERVEMAQWWADGLEKLQR 394 >UniRef50_C7HXY0 Integrase family protein n=1 Tax=Thiomonas intermedia K12 RepID=C7HXY0_THIIN Length = 392 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 121/389 (31%), Positives = 195/389 (50%), Gaps = 26/389 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WR Y GKQ+ G YP +TLA AR +A+ P + Sbjct: 26 LYLFVAPTGLKSWRANYELNGKQRTRTYGRYPAMTLAQAREAHTQAKS------TPAEAA 79 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKW--SEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + A TFK + +W + H +V +LE + A+G+ I ++ Sbjct: 80 TVTPIAKV-APTFKAITEQWLKIKLPSLSNGKHQGQVAGTLERFAYPAIGKLPIDQIPRT 138 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN-RQHRP 177 L+ ++AV+ GR+E A R+ R A+ YA G I+ + A + + ++ Sbjct: 139 KLVEVVQAVQKGGRVETAHRVAGRIAAVFDYAQDVGYIESHGAAGLVRVLQPRKVKKPMA 198 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 ++ LL ID Y P+TR ++L L F+R E+R RWSE+ + ++W +P + Sbjct: 199 SIPPGEAGALLAAIDGYE-EPVTRLGLQLLALTFVRVGEMRGMRWSELREDGTVWVVPAD 257 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K H+VPLS QA A+L+Q++ G +L+ +SENT Sbjct: 258 R------------MKAGLPHVVPLSQQARAVLEQLRVLTGDRNLVLDSPLRPGHALSENT 305 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 AL +GY + + HGFR +A + L E ++ D +ERQ++H ++VRAAY ++A Sbjct: 306 FLFALYRLGYRGR--MTAHGFRALASTVLNEQSGFAHDVIERQLAHRETDTVRAAY-NRA 362 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFE 386 ++L++RR ++QWWAD+LD RE P Sbjct: 363 QYLDQRRGLMQWWADWLDRQRESDRPPVS 391 >UniRef50_B1Y106 Integrase family protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y106_LEPCP Length = 429 Score = 329 bits (844), Expect = 9e-89, Method: Composition-based stats. Identities = 144/411 (35%), Positives = 215/411 (52%), Gaps = 39/411 (9%) Query: 1 MHLL-VHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++LL + G+ WRL Y + GK+K L+LG YP+ L+ AR + EAR L+A G DP + Sbjct: 35 LYLLPLVKGGAHGWRLDYTFNGKRKTLSLGTYPDTGLSLARKKAAEARTLVAEGTDPSEH 94 Query: 60 KKNDKVEQSKAR------------------TFKEVAIEWHGTNKK-WSEDHAHRVLKSLE 100 +K K E+ + + + VA +W W+E H + SL+ Sbjct: 95 RKGVKEERERQHLAGQEAAQRAAAGLAEPGSLEAVAADWLQHRAGAWTEGTRHNIAGSLK 154 Query: 101 DNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNP 160 +F LG R + E+ ++ ++ +E SG E A R+ QR A+ RYAV L+ +P Sbjct: 155 RYVFPTLGRRPVGEIAPGEIRTCVQRIEASGAAETAGRVFQRLRALYRYAVAHELVAADP 214 Query: 161 AQEMAGA--VASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELR 218 + + + +HRPA+ + P L K+ Y G P R A+ L +L +R ELR Sbjct: 215 TYPLKPSEIFRPRDTKHRPAMSAQEAPAFLRKLADYGGDPTVRNALLLLVLTAVRPGELR 274 Query: 219 FARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA 278 A W+EID A++W IP KM+ HLVPLS QALA+L++++ G Sbjct: 275 AAEWTEIDEAAALWRIPAAH------------MKMKAEHLVPLSVQALAVLEEMRALTGT 322 Query: 279 HDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVE 338 LIF +P SENT+NSAL MGY K E HG RT+ +S E+G D +E Sbjct: 323 QALIFPSPFYPGRPFSENTMNSALARMGY--KGEATAHGMRTLFSTSANEAG-HRGDVIE 379 Query: 339 RQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERF-ISPFEYA 388 RQ++H R+ VR AY ++AE++ ERR ++ WW + +D R + PF+ A Sbjct: 380 RQLAHEERDDVRGAY-NRAEYMAERRRLMTWWGERVDSMRRGAEVIPFKAA 429 >UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholderia ambifaria RepID=Q0BEM8_BURCM Length = 414 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 133/398 (33%), Positives = 209/398 (52%), Gaps = 20/398 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV P+GSK WR +YR GK+ + A+G YP +L ARV RD+AR+L+ G+ P + Sbjct: 26 LYLLVKPSGSKLWRYKYRIAGKENVFAIGEYPTTSLQAARVARDDARELVKKGLHPSHAR 85 Query: 61 KN--DKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + TF+ V+ EW +K W+E H +L+ LE + + +G R + + Sbjct: 86 QEVLSARINEGKATFRAVSDEWLEKKRKTWTERHFGEILRMLEADAYPYIGNRPMRSITA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 D+LA ++ VE G VA +L+Q + + +YAV + D +PA + GAV +H Sbjct: 146 HDVLALMRRVEKRGSPSVAIKLRQYVSNVFQYAVITLRADTDPASVLRGAVLKPPTEHAR 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L + + L ++ Y + T AI L +++F R+ EL ARW EID A+ W +PPE Sbjct: 206 PLSREELKALFRQLPLYKSKRTT-IAIRLLMMLFPRTVELCRARWEEIDLAAAEWRVPPE 264 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI--GDHDSHKPMSE 295 + K R H+VPL TQA+++L+++++ +G I + MS Sbjct: 265 KI------------KSRRLHIVPLPTQAISLLRELQEIHGNRGYILPILHSNRKRPHMSR 312 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T+N AL M + + GH FR A ++L E G W + VE Q+SH ++ R+ Y H Sbjct: 313 ATINRALDSMMPNNPEPITGHDFRATASTNLHEMG-WKDEVVEMQLSHKDKDRTRSTYNH 371 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFISPFEYAKINNP 393 A++L ERR M+Q WAD+L ++ A P Sbjct: 372 -AKYLPERREMMQSWADWLSDVENDALTDASAASTVTP 408 >UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TYD6_MARAV Length = 412 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 128/395 (32%), Positives = 213/395 (53%), Gaps = 25/395 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + G +YWRL+YRY GK+K+LALGVYP+++L +AR +RDEA++LLA+ +DP + Sbjct: 33 LYLDIQKAG-RYWRLKYRYGGKEKLLALGVYPDVSLKEARAKRDEAKRLLADNIDPVTHR 91 Query: 61 KNDKVEQ--SKARTFKEVAIEW--HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 + +K E+ + A TFK +A+EW H K + + LE + LG R +AE++ Sbjct: 92 QREKAERVEATATTFKGIALEWLEHVHKKNVGATTYPKNKRRLEMYAYPKLGRRPMAEIE 151 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 D+LA ++ +E G ++ A RL+ + RYAV +G + ++ G + + N +H Sbjct: 152 PPDVLAILREIEGKGHVDNAHRLKTLIGQVFRYAVSTGRATRDVTADLRGILPAPNVKHH 211 Query: 177 PA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 A I ++L KID+Y G P A++L+ +F+R LR RW EI Sbjct: 212 AAVTTPDEIADMLKKIDTYWGSPTVCLALKLSPYLFLRPGNLRHMRWEEI---------- 261 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 + +K +VPL+ QA+ +LK++++ G + +F +PMSE Sbjct: 262 ----DWDAATWTTDTTKNGEPLVVPLARQAIDLLKELQELNGNREWVFPSGAGKGRPMSE 317 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 N + AL + + + + HGFR MA + L E + + +E QM+H R+ AY + Sbjct: 318 NAITGALNRL--ELQGIMSAHGFRAMAKTVLTERLGFRTEIIEMQMAHRVRDVHGRAY-N 374 Query: 356 KAEHLEERRLMLQWWADFLDVNRE--RFISPFEYA 388 + L ER+ M+Q WAD+LD ++ ++P A Sbjct: 375 RTTWLPERQAMMQQWADYLDNLKKPGNNVTPIHQA 409 >UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enterobacteriaceae RepID=INTZ_ECOLI Length = 402 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 132/390 (33%), Positives = 214/390 (54%), Gaps = 22/390 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLVHPNGSKYWR +Y ++ + A+GVYP ITL +AR R E+R L+ANG++P ++ Sbjct: 31 LFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLITLKEARRRATESRSLIANGINPVEQA 90 Query: 61 KNDKVEQSKART--FKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +K + FK+VA +W T WSE +A +V +LE +++ LG+R+I ++ Sbjct: 91 RKEKAIDALNMAAGFKKVAEDWFATRVGGWSESYAKQVRSALEKDVYPVLGKRSIVDITA 150 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 RD+LA ++ E E A +L++R I ++AV + L+ NP ++ A+ + H Sbjct: 151 RDVLALLQKKE-RTAPEQARKLRRRIGEIFKFAVITELVTRNPVADLDTALKARRPGHNA 209 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + + IP ++ G + AI L +L +R++ELR RW I+ E + T+P E Sbjct: 210 WIPISEIPAFYKALERA-GSVQIQTAIRLLILTALRTAELRLCRWEWINLEDATITLPAE 268 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 K R H+VPLS QA+ +L+ G +F G KP+S + Sbjct: 269 ------------VMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVFPGRFM-DKPLSASA 315 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + AL +GY K GHG+RT ++L ESG +S D +E Q++H+ + +R Y ++A Sbjct: 316 ILKALERIGY--KSIATGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKG-IRGVY-NQA 371 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFEY 387 +L++RR M+Q +AD +D +P E Sbjct: 372 AYLKQRRAMMQDYADAIDSILAGNGNPLEP 401 >UniRef50_C6XEE3 Integrase family protein n=2 Tax=Proteobacteria RepID=C6XEE3_METSD Length = 406 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 134/387 (34%), Positives = 222/387 (57%), Gaps = 27/387 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYE---GKQKMLAL--GVYPEITLADARVRRDEARKLLANGVD 55 ++L V+ NG+KYWR +Y GK+K ++L GVYPE++L DARV + + L+ NG+D Sbjct: 29 LYLWVYANGAKYWRFRYFIHVEGGKKKEMSLSLGVYPEVSLNDARVEARKYQGLVDNGID 88 Query: 56 PGDKKKND--KVEQSKARTFKEVAIEWH-GTNKKWSEDHAHRVLKSLEDNLFAALGERNI 112 P KK + + TF E+A EW+ W+E HA + + +E NL + ++ I Sbjct: 89 PATAKKAKLLQTKAEAGDTFAEIAREWYRKMMPTWTETHARDIERRIEINLIPFIPQKPI 148 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 AEL+ D L P++ V+ G ++ RL + +YA+ G Y+ + A+ Sbjct: 149 AELEAVDFLKPLEKVQERGATHLSHRLLINIRQVYKYAIAKGKCKYDVTPGLGNALIPHV 208 Query: 173 RQHRPALELKRIPELLTKIDSYT--GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 +++PA+ + +P+L+T I Y G + ++L +++R+ EL F RW E+D+EA+ Sbjct: 209 AKNQPAIRPEELPKLMTDIADYHKLGEMKVQLGLQLMAHVWLRTRELTFGRWDELDYEAN 268 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +W +P ER KM HL+PL+ Q IL++++ + I G + Sbjct: 269 LWRVPGER------------MKMDRDHLIPLTPQVKVILERLRVLARGSEYILPG-RNHL 315 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 P+S NT+ AL +GY K + GHGFR++A + L ESG ++ DA+ERQ++H+ N+VR Sbjct: 316 TPVSNNTLLYALYRLGY--KSRMTGHGFRSVASTILNESG-FNADAIERQLAHVPENAVR 372 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDVN 377 AAY ++AE+++ERR M+ WW+++LD Sbjct: 373 AAY-NRAEYIDERRKMMLWWSEYLDKC 398 >UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_ACIB5 Length = 427 Score = 327 bits (839), Expect = 3e-88, Method: Composition-based stats. Identities = 122/394 (30%), Positives = 200/394 (50%), Gaps = 23/394 (5%) Query: 1 MHLLVHPNGSKYWRLQYR-YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++ V P+G K W +Y+ +GK L +G YPE++ A AR + E K ++ G +P Sbjct: 52 LYFRVKPDGKKAWLFRYKKADGKWSWLGIGTYPELSGAGARKKAREIIKDISQGDNPIIT 111 Query: 60 KKNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 K+ K ++ TF+ +A EW T W +D R +LE ++FA G+R +K Sbjct: 112 KQERKRQELEQNNATFEVLAREWLDTKANTWVKDTMTRNKGALEKHIFAIFGKRLYTSIK 171 Query: 117 TRDLLAPIKA-VEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + + +K + G E R++ I +A +G IDYNP + + + +Q+ Sbjct: 172 PIEWMNHLKGIQQHQGIYEQVNRVRAMCRDIYDFAKVTGRIDYNPLEGLQKFLQQGVKQN 231 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 + + +P LL I+SY R ++L ++F R +ELR A+W E D IW IP Sbjct: 232 MSHVSEQELPALLRAINSYPTMD-VRMGLQLLAMLFCRPTELREAKWQEFDLNQGIWNIP 290 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 ER K R H+VPL QA+ IL ++K + + +F D KP S+ Sbjct: 291 AER------------MKKRREHVVPLPRQAITILNELKTYETNSEYLFPSRSDKSKPKSD 338 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 ALR MGY+ + HGFR +A + L G R +E ++H+ ++ V Y + Sbjct: 339 TVFIMALRRMGYEGR--QTPHGFRHIASTLLNNRGFDERH-IEAALAHV-KDGVAGVY-N 393 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFISPFEYAK 389 KA++L++R++MLQW+A+ L+ ++ I F+ AK Sbjct: 394 KAQYLDDRKIMLQWYANHLEEIADQRIIQFKKAK 427 >UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV Length = 385 Score = 327 bits (839), Expect = 3e-88, Method: Composition-based stats. Identities = 120/377 (31%), Positives = 200/377 (53%), Gaps = 22/377 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V +G K W+L+Y+ +GK+K+L +G YP +TL +AR + ARK ++ G+DP K Sbjct: 25 LYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAK 84 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K S +F + EW+ K+ WS +A + K +D++ +G I +++ Sbjct: 85 KA----SSNNNSFSAIYKEWYDHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQ 140 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 LL I+ E G +E A + ++R + RYA+ +G YNPA ++A A+ +++ P L Sbjct: 141 LLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFL 200 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 +IP + +++G ++ A ++ +R+ ELR +W +DFE I TI Sbjct: 201 PADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIDA--- 257 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA-HDLIFIGDHDSHKPMSENTV 298 K R H+VP+S Q + +L + + +F G +D KP+ EN V Sbjct: 258 ---------SVMKGRKIHVVPMSDQVIELLTTLSSITKPVSEFVFAGRNDKKKPICENAV 308 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 ++ +GY+ GHGFR + + E W DA+E Q++H SVR Y H A+ Sbjct: 309 LLVIKQIGYEGLE--SGHGFRHEFSTIMNEH-EWPADAIEVQLAHANGGSVRGIYNH-AQ 364 Query: 359 HLEERRLMLQWWADFLD 375 +L++RR M+QWWAD+LD Sbjct: 365 YLDKRREMMQWWADWLD 381 >UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola DG893 RepID=A6F4S5_9ALTE Length = 437 Score = 327 bits (837), Expect = 5e-88, Method: Composition-based stats. Identities = 138/386 (35%), Positives = 204/386 (52%), Gaps = 25/386 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + P+GSK+WR +YR GK M +G YP IT+++AR RD A+K +ANG P + K Sbjct: 25 LALEIRPSGSKFWRYRYRLHGKAGMYTVGEYPTITISEARAIRDWAKKCVANGEAPAEVK 84 Query: 61 KND--KVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K + + +A T +EV EW NK WS + +V + LE +++ LG++ I ++ Sbjct: 85 KRELAERRAEQANTLEEVGKEWIARNKAGWSVYYHRQVTRMLEADIWPNLGKKGIRDITP 144 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LA ++ VE VA L+Q AI R+A+ + D +P + GA+ +H+P Sbjct: 145 AQMLAELQRVEER-APTVAVNLKQWLAAIYRHAIATLRADNDPTAPLRGAIKKPKAKHKP 203 Query: 178 ALELKRIPELLTKI---DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS--IW 232 + L +L I + +T AI L L R+ E+R ARW + D E+ W Sbjct: 204 SYNLDEFGKLCRAIWPKEGAIAYRITEIAIRLLALTMARTVEVRSARWDQFDLESEEPTW 263 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 TIP E+ K THLVPLS+QA+ +L++++ G F +P Sbjct: 264 TIPGEK------------MKRGVTHLVPLSSQAVELLRELEGLTGNRPYCFPNLRQPTEP 311 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 MS T+N L +GY GH FRT A + L G + D VERQ++H N RA+ Sbjct: 312 MSATTINRVLERLGYGG--LFSGHAFRTTASTLLNNYG-FDGDWVERQLAHTEENKSRAS 368 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNR 378 Y H AE+L +RR+MLQWWAD +D R Sbjct: 369 YNH-AEYLYQRRIMLQWWADLVDTLR 393 >UniRef50_Q0I4P6 Integrase n=14 Tax=Pasteurellaceae RepID=Q0I4P6_HAES1 Length = 418 Score = 327 bits (837), Expect = 7e-88, Method: Composition-based stats. Identities = 115/397 (28%), Positives = 197/397 (49%), Gaps = 23/397 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LLV GSK WR Y K+ ++LG YP+++LA AR R++ R LLA +DP + Sbjct: 37 LYLLVKATGSKLWRFNYYKPLTKKRTEMSLGAYPDVSLAQARELRNQYRSLLAQDIDPNE 96 Query: 59 KKKNDKVEQ--SKARTFKEVAIEWHG---TNKKWSEDHAHRVLKSLEDNLFAALGERNIA 113 ++N K + T++ VA W T K +SE + V ++ L G I+ Sbjct: 97 HRQNVKQAKLDEINNTYEAVAWAWFEYRQTKKNFSEGYKKDVASLIKRCLLPHFGSLPIS 156 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 ++ L K + G LE R Q+ IM +A+ LI +NP ++ S Sbjct: 157 QITAPMALKAFKQYQDEGTLEKLKRTIQKHNEIMNFALHRDLISFNPTANISKEFDSPTV 216 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 +H ++ + +PE + +++ TR+ I LL R +E AR+ +ID ++ +WT Sbjct: 217 EHFKTIQPEDLPEFMYTLNNAQINLRTRYLILWQLLTMTRPNEAAKARYEDIDEKSRLWT 276 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP E K H + LS QA+A+L++IK+ G +F + Sbjct: 277 IPAE------------NMKRGIAHKITLSRQAMALLREIKKLSGGKTYLFPNVKYPQTHV 324 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 + T N+A++ MGY K + HG R++A + L E G ++ + +E +SH+ + ++AAY Sbjct: 325 NTQTANAAIKRMGYQGK--LVAHGLRSIASTYLNEKG-YNSELIEVALSHINSDRIKAAY 381 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERFISPFEYAKI 390 + E LE+R +LQ WADF++ + + + ++ Sbjct: 382 -DRGERLEQRFKLLQVWADFVEECSQGALPQYHLKRV 417 >UniRef50_A1W8P6 Phage integrase family protein n=4 Tax=Comamonadaceae RepID=A1W8P6_ACISJ Length = 413 Score = 326 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 129/391 (32%), Positives = 213/391 (54%), Gaps = 14/391 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+GSK W + ++GK+ +ALG YP +LADAR RD A+ A+GVDP ++ Sbjct: 27 LYLEVSPSGSKRWFWKTYFDGKEGRMALGSYPTQSLADARKARDIAKLKKADGVDPVQER 86 Query: 61 KNDKVE--QSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K++ +S TF+ +A+EWHG +WS+ HA R + LE +LF +G+R + ++ Sbjct: 87 KLEKLKGSRSGGDTFQAIALEWHGRQVDQWSDTHAGRTKRQLERDLFPWIGDRQMTSIEP 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQS-GLIDYNPAQEMAGAVASCNRQHR 176 +LLA ++ +E G +E A R I RY + + G + + + + Sbjct: 147 MELLATLQKIEERGAMETADRALMLCRQIWRYWLPTAGNTQRDITVGLKNRLTPYRGTNF 206 Query: 177 PAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 PA+ E KR ELL + Y G R A+ L L++ R LR W+E+D +A++WTIP Sbjct: 207 PAIVEPKRFGELLRAMHVYKGSHTVRTALLLAPLLYQRPGNLRAMEWAEVDLDAALWTIP 266 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 + +K + + H VPL TQA+ +L+ ++ G +F G D +PMS+ Sbjct: 267 SMK-----MKRTKTEKEQGEPHAVPLPTQAVELLRNLQALTGRGTYVFPGQRDHERPMSD 321 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 N+V SAL +G+ T+ HGFR A + LV+ A+E ++H ++S +Y + Sbjct: 322 NSVRSALYSLGFGTEQSW--HGFRASARTMLVDQLDLDPLAIEANLAHAVKDSNGRSY-N 378 Query: 356 KAEHLEERRLMLQWWADFLDVNR-ERFISPF 385 + ++L++R +Q WA++LD R + P Sbjct: 379 RTQYLKKRYDQVQMWANYLDRLRLGAEVVPL 409 >UniRef50_D1B120 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B120_SULD5 Length = 419 Score = 326 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 126/402 (31%), Positives = 208/402 (51%), Gaps = 35/402 (8%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++LLV PNGSK WRL Y R G + ++LG YP ITL +AR +RDE +K + GVDP + Sbjct: 31 LYLLVEPNGSKGWRLDYTRPNGGRNTISLGTYPTITLCEAREKRDELKKQIKKGVDPSLE 90 Query: 60 KKNDKV------------EQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAA 106 +K K E+ K TF++VA ++ + + + L LE+++F Sbjct: 91 RKGVKELQREEKEADHAEEERKQNTFEKVARDFFESITIELVPKYHSSKLARLENHIFPY 150 Query: 107 LGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG 166 +G I ++ ++ ++ ++ + ++E A R+ + RYAV L +N ++ Sbjct: 151 MGNIPIDQVSRLMIIEHLERLKAANKIETARRILNIIEQVYRYAVTHELAPHNIIADIDK 210 Query: 167 --AVASCNRQHRPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWS 223 + +H P + I +L+ ID Y G T++A++L +L R +RFA W+ Sbjct: 211 RYVIGKKEVRHFPTITDPVEIGKLVRMIDEYPGDISTKYALKLAILTAQRPYNIRFAEWN 270 Query: 224 EIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY-GAHDLI 282 E D E +W I E+ KM+ H++P+ Q IL++++ F + Sbjct: 271 EFDLERDVWQISAEK------------MKMKRPHIIPIILQIKTILRELEPFTKNRSQYL 318 Query: 283 FIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVES---GLWSRDAVER 339 F + +P+SENT+N ALR +GY TK E+ HGFR M + E + D +ER Sbjct: 319 FPALTSNVRPISENTMNQALRRLGY-TKEEIVSHGFRAMFSTIANEHIPEHGFHSDIIER 377 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 ++H +N + AY ++AE+L ERR +++WWA+FLD R Sbjct: 378 HLAHSEQNKTKGAY-NRAEYLNERRGLIEWWANFLDKVRMNK 418 >UniRef50_B6BKY5 DNA integration/recombination/inversion protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKY5_9PROT Length = 400 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 127/388 (32%), Positives = 205/388 (52%), Gaps = 26/388 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLAN-GVDPGDK 59 ++L V+ NG K+WR +Y+Y K K ++LGVYP+ TLA+AR +RDEAR +LAN DP K Sbjct: 31 LYLEVNINGGKWWRFRYKYNDKIKKVSLGVYPDTTLANARRKRDEARNILANDNRDPFIK 90 Query: 60 KKNDKVEQSKARTFKEVAIEWHGT--NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K E+ +TF+E A EW+ T + + S+ H R +K + +++ +G + + ++K Sbjct: 91 IVVHKKEEVVQKTFQEWA-EWYITEISTELSDTHITRTVKGFKKDVYPIIGSKRMNDIKA 149 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQS--GLIDYNPAQEMA--GAVASCNR 173 RD++ + ++ G +E A + + A+ + ID NP ++ + + Sbjct: 150 RDIIKIMHIMKERGAVESARKTFSSINRVFAKALSNFPDEIDRNPTADIKLGDILGAKQT 209 Query: 174 QHRP-ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 + P E K + LL I YTG T A+ + F+R +R ARW EIDF W Sbjct: 210 TNYPIITEPKELATLLKAIKEYTGDTSTILALTMIAHTFVRPINIRLARWDEIDFNTKQW 269 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 IP + K + +VPLS Q + +LK+ K L+F P Sbjct: 270 VIPASK------------MKTKKELIVPLSKQVIELLKEAK---SDSALVFPSIRSKTSP 314 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 MS+N + ALR MGY ++ E+ H FR + + E G+++ D +E Q++H +SV A Sbjct: 315 MSDNALVGALRRMGY-SREEIVAHSFRGIFSTIAHEKGIYAHDVIETQLAHTVGSSVSQA 373 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRER 380 Y ++A++LEER M+QWW+D+L + Sbjct: 374 Y-NRAKYLEERTKMMQWWSDYLTTLPSK 400 >UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepID=Q1Q875_PSYCK Length = 452 Score = 323 bits (829), Expect = 6e-87, Method: Composition-based stats. Identities = 126/397 (31%), Positives = 208/397 (52%), Gaps = 25/397 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV +G++ W YR++GKQ+ LG YP++ LA+ARV + + L+ANG++P +KK Sbjct: 30 LQLLVRSSGTRTWVSAYRFDGKQQKTTLGTYPQMGLAEARVANADIKALVANGINPKNKK 89 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 + DK+ +A+TF + A+EW ++ + + ++ + + ++ D Sbjct: 90 RQDKLANEQAKTFNDYAVEWLEERERNVKPRTYQQDYNRMHKDVIPSFEGIALKDVTFED 149 Query: 120 LLAPIKAVEMSGRLEVA------ARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 +E E A R I+R A++ LI+ N + Sbjct: 150 CKLMADNIESRTNNEGASPREVTRRTIDLVGNILRRAMRERLIEVNHTDGLKELYPKAKT 209 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 +H +EL +P+LL I+ Y G TR ++ F R+ ELR +W IDF +W Sbjct: 210 KHMKHVELSELPKLLQDIEGYHGHDQTRLGMKFLAYSFCRTIELRMMKWEHIDFPNRLWR 269 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 + K+ H+VPLS Q LA+L+++K G ++ +F H+P Sbjct: 270 V------------DIDNLKIARKHVVPLSDQMLAVLEEMKHITGQYEYVFYHT-GMHQPY 316 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 SE +N+AL ++GY K GHGFR +A ++L E G + DA+E+QM+H ++S+RA Y Sbjct: 317 SEEFINNALDILGYGGK--QTGHGFRHIASTNLNELG-YMGDAIEKQMAHDKKSSIRAVY 373 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRER-FISPFEYAK 389 H A+HLEERR ++Q WADFLD+ R++ + F+ A+ Sbjct: 374 NH-AQHLEERRKIMQVWADFLDLLRDKGEVIDFQTAR 409 >UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5EXV7_DICNV Length = 401 Score = 323 bits (827), Expect = 8e-87, Method: Composition-based stats. Identities = 125/381 (32%), Positives = 212/381 (55%), Gaps = 29/381 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + GS +W +Y G+++ ++LG YP +++ AR E R L G+DP ++ Sbjct: 36 LSLKITDRGSYFWNFRYYINGRERNMSLGRYPAMSIEAARGEALELRYHLRQGLDPLAER 95 Query: 61 KNDK-----VEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIA 113 K + E+++ TF+ VA EW+ + +E HA +V+ +LE +F +G++ I+ Sbjct: 96 KKKQAAYLAEEKTQKETFEFVAREWYQLKRPEWKNEKHAQQVITTLEQFVFPFIGKKPIS 155 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 + +LL ++ + E A+R++QR A+ YA+Q+ + NPA + S Sbjct: 156 RISPPELLKVMEKLYDR--PETASRVKQRIRAVFDYAIQTDRLSRNPAIALPKIFRSTIA 213 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 + +P+L + + ++D+Y G P T A+ L +L RS ELRF +W E + + W Sbjct: 214 K-QPSLPARELGIFFKQLDTY-GNPKTALALRLLILTMTRSGELRFGQWQE--LQGNEWH 269 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP ER KM H+VPLS AL IL +++ + F+ + + P+ Sbjct: 270 IPAER------------MKMNRPHIVPLSDWALEILDELRSLRRNNSPYFV-TGNRNTPL 316 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S+ T++ A++ +GY + HGFR A +++ ESGLW+ DA+ERQ++H N+VRAAY Sbjct: 317 SDTTLSLAMKRLGYAGRA--VPHGFRATASTAMNESGLWNPDAIERQLAHTDENAVRAAY 374 Query: 354 IHKAEHLEERRLMLQWWADFL 374 ++AE+LEER M+QWWAD++ Sbjct: 375 -NRAEYLEERHRMMQWWADYI 394 >UniRef50_Q5R097 Integrase n=2 Tax=Idiomarina RepID=Q5R097_IDILO Length = 436 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 153/417 (36%), Positives = 225/417 (53%), Gaps = 54/417 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV G KYWRL+YR+ KQK LALGV+P +TL A+ +A+ +LA+GVDPGD Sbjct: 34 LRLLVRKQGGKYWRLKYRFNKKQKTLALGVFPNVTLKQAKDATIKAKAMLADGVDPGD-- 91 Query: 61 KNDKVEQSKARTFKEVAIEW-----HGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K + + + A +W T + WSEDH RV K LE+ + LG++ I ++ Sbjct: 92 --TKSTNTNDNSLRFYAAKWLEYQSQATARVWSEDHKARVWKRLENGILKKLGDKLITDV 149 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ- 174 + D+ I+ VE G E A R+ T + Y V ++ + + V ++ Sbjct: 150 RKEDVRRLIENVEAKGHHETAKRIADDTQRLFEYVVDQYSLEDDVDIRLLRPVKVISKPV 209 Query: 175 -HRPALELKRIPELLTKIDSYT--GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 HR AL++K +P + + +YT GR LT AIEL +L F+RS ELR ARW E D + + Sbjct: 210 VHREALDIKNLPFFMQDLANYTQTGRELTALAIELLILTFVRSGELRGARWEEFDLDNKV 269 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W+IP ER KM+ H VPLS +AL ++K+IK+ G ++L+F + + Sbjct: 270 WSIPAER------------MKMKRPHEVPLSAKALDVIKRIKRITGHYELLFPSETKPDE 317 Query: 292 PMSENTVNSALRVMGY----------------------------DTKVEVCGHGFRTMAC 323 PMS+NT+ A+ MGY K + HGFRTMA Sbjct: 318 PMSDNTMRQAMFKMGYFPKAKDTKDGKIAKTYLKYQDNAHYPDGRLKEKAVPHGFRTMAS 377 Query: 324 SSLVES-GLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 S+L ES + DA+ERQ++H+ +N V+ AY HKAE+ +ER M++WW DF++ RE Sbjct: 378 STLHESDQKFRSDAIERQLAHVEQNKVKDAYSHKAEYWDERVEMMEWWGDFVNEQRE 434 >UniRef50_B3GXJ8 Prophage CP4-57 integrase n=4 Tax=Pasteurellaceae RepID=B3GXJ8_ACTP7 Length = 406 Score = 321 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 109/382 (28%), Positives = 188/382 (49%), Gaps = 17/382 (4%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V P+ K W Y+ ++ L +G YP I++A+AR R+E R LLA G+DP Sbjct: 31 LYLRVKPSKVKTWIFNYQEPITKRRTNLTIGDYPAISIAEARTIREEYRALLAKGIDPKT 90 Query: 59 KKKNDKVEQS--KARTFKEVAIEWHGTNKKWSED-HAHRVLKSLEDNLFAALGERNIAEL 115 K+ + +Q+ TF ++A W K E + LE++LF LG I ++ Sbjct: 91 NKEEQERQQAEQNDNTFLKLAQLWKEKRSKEVEPLTMAKNWARLENHLFPVLGHYAIDKI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 L+ +K + G + R+ I+ Y V G++ +N Q ++ A + H Sbjct: 151 TPPILIKAVKPLNDKGINDTLHRILNLANQILNYGVTVGVLPFNACQNVSDAYHKETQTH 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 PA++ +P+L+ + LT+ + LL +R +E W+EIDF+ ++W IP Sbjct: 211 HPAIKPSELPKLIADFQNSNRDFLTKVLFKWQLLSMVRPAEAVSIEWAEIDFDKNLWFIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 E+ + K + H VPLS+Q L IL+ ++ G + +F +K MS+ Sbjct: 271 AEKM--------KKTRKGQFPHTVPLSSQMLKILESLRPITGVNKFVFPHYSQPNKSMSK 322 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T+ +ALR +GY + HG R++A + L + + A E ++H N AY + Sbjct: 323 ETITNALRKIGYRGIQD--SHGLRSIARTYLEDQAV-DFRAAESCLAHRIGNETSQAY-N 378 Query: 356 KAEHLEERRLMLQWWADFLDVN 377 +AE++E RR ++Q W D+ + Sbjct: 379 RAEYIELRRPLMQLWGDYCESC 400 >UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepID=Q5E028_VIBF1 Length = 399 Score = 320 bits (821), Expect = 5e-86, Method: Composition-based stats. Identities = 113/381 (29%), Positives = 198/381 (51%), Gaps = 21/381 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQK--MLALGVYPEITLADARVRRDEARKLLANGVDPG- 57 + L V P G+K W+ ++ +K +ALG YPE++LA+AR + E R LLA ++P Sbjct: 31 LQLRVRPTGAKSWQFKFSDPVTRKIQKIALGPYPELSLANARSKTTEYRTLLAQKINPKS 90 Query: 58 -DKKKNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++ K + ++ + TF VA +W K+ S H++R ++LE +F + + +A + Sbjct: 91 FEQSKELEAKRVQTSTFIVVAEQWFERKKETVSPAHSYREWRTLEKYIFPHMSKIPVATI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + + ++ +E G+ R+ Q IM Y+V GLI NP ++ H Sbjct: 151 TAVETIDVLRPLEKEGKYSTVKRICQSLNQIMDYSVNHGLIHANPLAKIIKVFRKNTVLH 210 Query: 176 RPALELKRIPELLTKIDSY-TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 P + +++P+ L ++ S T + T+ I L R E RW +ID E +WTI Sbjct: 211 MPTIRPEQLPDFLKRLHSCSTIQTKTKLLILWQLHTMTRPKEAATTRWIDIDLEKGVWTI 270 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E K R H +PL++QA+ IL QI+ D +F G+ D + +S Sbjct: 271 PAE------------NMKRRKEHRIPLTSQAINILNQIRLQSKRCDYVFPGERDINSHVS 318 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 T N+A++ K E+ HG R +A ++L E G + +E +SH +N VRA+Y Sbjct: 319 LFTANAAIKR-SLGLKDELVAHGLRAIASTALHEYG-FDSLLIEACLSHADQNEVRASY- 375 Query: 355 HKAEHLEERRLMLQWWADFLD 375 +++++LE+R+ ++ WW++++D Sbjct: 376 NRSDYLEQRKEIMCWWSNYID 396 >UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, phage integrase family n=2 Tax=Pseudomonas RepID=Q48NQ4_PSE14 Length = 391 Score = 320 bits (821), Expect = 5e-86, Method: Composition-based stats. Identities = 118/377 (31%), Positives = 199/377 (52%), Gaps = 20/377 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V GSK WR ++R GK+ A+G YPE++L+DAR RD AR L+ +G +P + Sbjct: 26 LYLEVTTGGSKLWRYRFRLAGKENTYAIGAYPEVSLSDARTERDAARDLVKSGRNPAHVR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +K +Q TFK V+ EW + ++ + ++ ++ ++++ +G + E+ Sbjct: 86 QTEKAQQLTENRNTFKIVSQEWIEKRLAQRTQKYRDQIERAFVNDVYPRIGRLPLREITA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L I A++ +A ++Q +A+ Y V + D +PA + GA+ H Sbjct: 146 AQVLEIITAMDRRNATTLALMVRQWISAVFCYGVATLRADSDPASAVRGAIRRNEVNHSR 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + L + E + +Y G T A+ L ++F+R+ ELR A WSE D +A++WTIP Sbjct: 206 PMSLIELREYFRAVKTYGGHRRTVIALYLLPILFVRTIELRLAEWSEFDLDAALWTIPAR 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R HLVPL ALA+L+++++ + L+F G +P+S T Sbjct: 266 R------------MKKRKIHLVPLPESALALLRELREITAGN-LLFPGMRHPKEPISATT 312 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +N AL M H FR A + L ES LWS D +E Q++H+ + +AAY H A Sbjct: 313 LNRALEYMDLKG---WHCHDFRATASTHLYESELWSSDVIEFQLAHVEQKKSKAAYNH-A 368 Query: 358 EHLEERRLMLQWWADFL 374 +L R+ ++QWW +++ Sbjct: 369 SYLPARKALMQWWDNYI 385 >UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIW0_9NEIS Length = 394 Score = 320 bits (820), Expect = 5e-86, Method: Composition-based stats. Identities = 133/385 (34%), Positives = 209/385 (54%), Gaps = 23/385 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + G +YWR++Y Y KQ LG+YP + L AR+ RD+ + LL+ G++P + Sbjct: 27 LYLQIDAKGRRYWRIKYTYNQKQHTQHLGIYPAMPLKAARMERDKIKLLLSQGINPKTHQ 86 Query: 61 KNDKVEQSK--ARTFKEVAIEWHGTNKK---WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + + + K TF+ VA +WH T + W HA RVL+ +E L LG +IA++ Sbjct: 87 EQQQRAEQKRITNTFEHVARKWHTTKAEKGDWKPAHATRVLRQIELYLIPPLGSLSIADI 146 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN-RQ 174 + D+L I+ VE +G++ A ++ AI +A + L YN A E+ + Sbjct: 147 EPLDILHAIQNVEHTGKIATANKVYDIAHAIFSFAARMKLCPYNAAAELKPELQQAKATP 206 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 +R + + LL ID YTG P + ++L L+F R SELR +W++IDF+A+ + Sbjct: 207 YRHVTDTGELTALLQAIDGYTGSPQVKVLLQLAPLVFARPSELRLLKWADIDFQAACYH- 265 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 + K H+VPLS QALA+L +K G ++ +F + + KP+S Sbjct: 266 -----------KAAHEMKNGIAHIVPLSRQALALLSSLKPVTGHYEYVF-HNKAAGKPLS 313 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 E AL +G+ K V HGFR A + L E +S D +ERQ++H N+ RA+Y Sbjct: 314 EAAARKALSRIGWLDK--VTLHGFRHTASTLLHEQ-QYSSDWIERQLAHKDPNTTRASY- 369 Query: 355 HKAEHLEERRLMLQWWADFLDVNRE 379 + A+HLE+RR M+Q WADFLD ++ Sbjct: 370 NFAKHLEQRRQMMQEWADFLDSLKD 394 >UniRef50_A6QCY9 Site-specific recombinase, phage integrase family n=2 Tax=Proteobacteria RepID=A6QCY9_SULNB Length = 409 Score = 320 bits (820), Expect = 6e-86, Method: Composition-based stats. Identities = 119/389 (30%), Positives = 209/389 (53%), Gaps = 24/389 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + P G K+WRL+YR++GK+K ++LGVYP +L DAR +R++ + +A G+DP ++ Sbjct: 31 LYLSITPKGQKWWRLKYRFDGKEKRISLGVYPNTSLQDARQQREDFKTQIAKGIDPSRER 90 Query: 61 KNDKVEQSKA-----RTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAE 114 K K TFK + +EW + + +E + ++LE + +A LG++++ + Sbjct: 91 KEKKEAVKAEVFKSRNTFKSICLEWIELQRPQMAEATLSKYERTLEKDFYAPLGDKSMND 150 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA---VASC 171 + DL+ + ++ G +E A R I RYA+Q + +N +++ + Sbjct: 151 ITRHDLITIAQVIQDRGAVETAHRSLGLCNRIWRYALQFDKVGHNIVSDISKKDVLRSYK 210 Query: 172 NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 N+ + + RI EL+ ID+YTG T+ A+ L L F+R +R+A WSE D E I Sbjct: 211 NKSFKTITDEVRIGELMNAIDNYTGEFTTKSALRLLPLTFVRPHNIRYAEWSEFDLENGI 270 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 WTIP E+ + +PL+ QA+ ILK+I + +F K Sbjct: 271 WTIPAEKMKMKKEHK------------LPLAPQAVKILKEIYPYTNDAKYVFHSPISRLK 318 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 +SENT+N AL+ + + E+ HGFR M + ESG + + +E ++H N V+ Sbjct: 319 AISENTLNMALKRLDFGG--EIVSHGFRAMFSTLAYESGKFRSEVIEDLLAHQEANQVKK 376 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRER 380 AY ++A + E+R +++W+AD+L+ + + Sbjct: 377 AY-NRAAYDAEKREIVEWYADYLENVKIK 404 >UniRef50_Q8W6M6 Putative uncharacterized protein orf1 n=1 Tax=Sinorhizobium phage PBC5 RepID=Q8W6M6_9CAUD Length = 433 Score = 320 bits (819), Expect = 7e-86, Method: Composition-based stats. Identities = 122/377 (32%), Positives = 191/377 (50%), Gaps = 14/377 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V G+K WRL+YR++GK+K L +G YP+++LADAR R+ A++ L +G DP K Sbjct: 27 LNLFVLSTGTKSWRLRYRFDGKEKTLVIGNYPDVSLADARGEREAAKETLKSGRDPNVVK 86 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K +Q A TF+ +A EWH K W E HA VL SL +++F +G+ I ++ Sbjct: 87 KIEKAIGKQQAADTFEVLAREWHKLQKPTWVEKHASDVLDSLVNDVFPIIGQMPIRDIDA 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L ++ VE E A R++QR +AI Y + SG +PA + GA+A + +P Sbjct: 147 PTVLGVLRLVEQRDAKETARRIRQRISAIFVYGIASGRASEDPAAVVRGAMAPMKKGRQP 206 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARW---SEIDFEASIWT 233 A L + E+L P+T+ + L L +R L W E+D +W Sbjct: 207 AITNLDKAREMLVATWKTPSHPVTKLGLRLLTLTAVRPGTLISTPWTELDEVDESDPVWV 266 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP R + HL+PLS +A+ + ++ G + +HKPM Sbjct: 267 IPAARMKLLLQHKDDET----RDHLIPLSKEAMETITVLRSLTGRGPFVLPNGRHAHKPM 322 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 SEN + L GY K HGFR+ + + E R ++ ++H ++ V AY Sbjct: 323 SENALGYLLNRSGYHHK--HVPHGFRSTFSTVMNERYPADRQVIDLMLAHTPKDKVEGAY 380 Query: 354 IHKAEHLEERRLMLQWW 370 ++AEHLE R+ + Q W Sbjct: 381 -NRAEHLERRKELAQIW 396 >UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIX3_RHOVA Length = 392 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 137/384 (35%), Positives = 213/384 (55%), Gaps = 21/384 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV PNGSK WRL YR+ GK K LA+G YP+I L+ AR +R EAR+LLA GVDP +K Sbjct: 26 LYLLVRPNGSKLWRLNYRHLGKNKTLAIGKYPDIALSTARDKRAEARRLLAEGVDPSYRK 85 Query: 61 KND--KVEQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + + K + + A TF+ VA E+ + + SE L ++ LG R IAEL+ Sbjct: 86 QVEVAKAKVAAANTFEAVAEEYLASLARDRSEGTVRANSHILRKKVYPLLGRRPIAELRP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++L ++++E G++++A R + + + A S +P + G + S Q+R Sbjct: 146 HEILEALQSIEDRGQVDMAHRARTLIGKVFQLAALSDRAPTDPTVVLRGRLKSWRVQNRA 205 Query: 178 ALELKRIPE-LLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 ++ ++ LL +ID+Y G P R A+ F+R+ ELRFA WSEID E +W IP Sbjct: 206 SVTSEQTFAPLLRRIDTYEGSPNVRAAMLFLAHTFVRTVELRFATWSEIDLEDGVWRIPE 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER KM H VPL+ AIL+ + +F D IF+ H + + Sbjct: 266 ER------------MKMGRPHDVPLTASTRAILRDMAKFR-RGDYIFVSAHVGKSVLGDG 312 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+ A++ +GY + + HGFR+ A S L E G + D +E Q++H+ +N+VR AY ++ Sbjct: 313 TLRKAMKSIGYQGR--MTPHGFRSSASSILNERG-YRSDVIEMQLAHVEKNAVRRAY-NR 368 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 + ER M+Q W++ +D R+R Sbjct: 369 TLYWNERVSMMQDWSNLVDGWRKR 392 >UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacteria RepID=B1Y4T5_LEPCP Length = 427 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 136/371 (36%), Positives = 208/371 (56%), Gaps = 25/371 (6%) Query: 1 MHLLVHP------NGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGV 54 ++L V P +GSK WR +YR+ GK+K+LA+G YP +++A AR + +AR LL G Sbjct: 27 LYLEVKPPGAKTPSGSKLWRWKYRHGGKEKLLAIGAYPAVSVAGARREQAKARALLDAGT 86 Query: 55 DPGDKKKNDKVEQSKAR--TFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLFAALGERN 111 DPG+ +K K + +F+ VA +W +E +A VL+ LE + F +G + Sbjct: 87 DPGEARKEAKYAKLNEHETSFEAVARQWWAGWKANKTERYAEYVLRRLELDAFPVIGAKP 146 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG--AVA 169 +A L D + K +E G E+A R+ + + +MR+AV GL + NP ++ + Sbjct: 147 VAGLTAPDFVRMAKKIEARGVGELARRIMETSGQVMRWAVAHGLTERNPTADVKPGDILK 206 Query: 170 SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 ++ + +P+L+ I++Y G TR A++L L F+R+SEL A+W E D +A Sbjct: 207 PRTVENFARVGAAELPDLMRHINAYDGSVFTRLALQLMALTFVRTSELIGAQWQEFDLDA 266 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD-----LIFI 284 + WTIPP+R G + R HLVPL+ QALA+L+ ++ GA L+F Sbjct: 267 AEWTIPPDRIGRKGRQGE------RRAHLVPLAPQALAVLRLLQSARGADRCRGPALLFP 320 Query: 285 GDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM 344 G+ D +PMS NT+ AL MGY K + GHGFR +A ++L E G + D +E Q+SH+ Sbjct: 321 GERDHERPMSNNTMLKALERMGYKGK--MTGHGFRGIASTALNEMG-FRFDVIEAQLSHI 377 Query: 345 ARNSVRAAYIH 355 N VRAAY H Sbjct: 378 EGNRVRAAYNH 388 >UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IRV8_BORPD Length = 402 Score = 317 bits (811), Expect = 7e-85, Method: Composition-based stats. Identities = 129/383 (33%), Positives = 200/383 (52%), Gaps = 25/383 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HLLV PNGS+ WR ++R GK+++ A+G YP++ LA+AR R AR+L+A+GV P ++ Sbjct: 33 LHLLVQPNGSRLWRYKFRLGGKEQVFAIGRYPDVGLAEARERHLAARRLVADGVSPTAQR 92 Query: 61 KNDK------VEQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIA 113 ++D+ ++KA TFK V W T + + + + ++ L LG R + Sbjct: 93 RDDRARMAEDAARAKAGTFKAVLDSWKATPARALAPATIRQRDREIDRYLEPKLGARPVG 152 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 E+ R+L +K + EVA L+ +I +AV GLI NP A+ + + Sbjct: 153 EITRRELADLLK-TVATDTPEVARNLRTHMNSIFEHAVDVGLIAGNPTPG-PRALPARKQ 210 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 PA+ + + LL ID+ +P T+ A L LL R E+ RW EID +A W Sbjct: 211 TSHPAVAMDELGALLASIDASACQPATKAAFRLLLLTACRKLEITSGRWDEIDLDAGEWL 270 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP +R K RT H VPLS QA+ +L+ ++ G D +F + PM Sbjct: 271 IPADR------------MKTRTAHWVPLSRQAVELLRAVRAHSGG-DYVFPHRDKPNTPM 317 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S +N LR +GY + E+ HG R++ + + D +ER ++H R+ VRAAY Sbjct: 318 SPTALNEMLRRVGY--RREMTVHGTRSIFSTWANAQPGANVDVIERCLAHAPRDKVRAAY 375 Query: 354 IHKAEHLEERRLMLQWWADFLDV 376 ++ + +ERR +LQ WAD LD Sbjct: 376 -NRHAYKDERRALLQSWADVLDA 397 >UniRef50_Q4K6S7 Site-specific recombinase, phage integrase family n=4 Tax=Proteobacteria RepID=Q4K6S7_PSEF5 Length = 413 Score = 316 bits (810), Expect = 8e-85, Method: Composition-based stats. Identities = 114/395 (28%), Positives = 187/395 (47%), Gaps = 23/395 (5%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++ V P+G K W+L+Y R G + LG YPE++ A AR + E RK +++G+DP ++ Sbjct: 34 LYFRVKPDGGKSWQLRYKRPAGNWAWMGLGGYPEVSGALAREKAAELRKTISSGIDPLEQ 93 Query: 60 KKNDKVE--QSKARTFKEVAIEWHGTN--KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K++ K +K RTF+ A W K + +++ L+ ++ ALG++ + E+ Sbjct: 94 KRSAKAAIDAAKTRTFRAAADAWLKAKEEKGLAPSTLNKIRTYLDKDILPALGDKPLDEI 153 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG-AVASCNRQ 174 D ++E VA + + I A+ GL + +P + A + Q Sbjct: 154 TRTDCAELQASIEARDAHNVAEKCRTWINQIFGRAIGLGLTENDPGSRLRDIAAQAPKTQ 213 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 P L + E LT + + R R A L + R +R A W E D + + WT Sbjct: 214 QHPHLLEPELGEFLTALKNTPSRLTARTAAWLCIWTASRPGMVRLAEWKEFDLDKATWTT 273 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P + KMR + PL QA+A LK++ G +F G + +S Sbjct: 274 PAAK------------MKMRRDFVCPLPHQAIAALKELHCLTGRSRWLFPGVGAKNPTIS 321 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 ENT+N +GY K + GHG R A + L E G W ++ VE Q++H + Y Sbjct: 322 ENTINKVFATIGY--KGRLVGHGTRHTASTLLREHG-WPKEHVEAQLAHKEEG-ISGVY- 376 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFISPFEYAK 389 +KA++LE+R M+QW+AD LD + + ++ K Sbjct: 377 NKAQYLEQRITMMQWYADHLDALEQGKVIQGQFGK 411 >UniRef50_A6SWC6 Prophage integrase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWC6_JANMA Length = 414 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 125/388 (32%), Positives = 209/388 (53%), Gaps = 15/388 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGK--QKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 M+L + P+GSK WR+ YR E + L G YP + LA+AR +R + +K + GVDP Sbjct: 31 MYLEILPSGSKVWRMAYRQENRTTSTRLTFGHYPAVGLAEARRKRADTKKQIVEGVDPAQ 90 Query: 59 KKKNDK--VEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++ +K + A TF+ VA WH ++W A+ +L+ LE ++F +G+R IAE+ Sbjct: 91 ARRVEKAISATAAANTFEAVARMWHQNKLEQWQPRTANNILRRLEQDVFPLIGKRPIAEV 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 K +L ++ +E G E+A R Q + I RYA+ G+ + +P + GA+ + Sbjct: 151 KAPVMLDVLRQIEKRGAAEIARRNAQVCSQIFRYAIACGIAENDPVPALRGALKPRIKGV 210 Query: 176 RPALELKRIPELLTKIDSYTGR--PLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 A+ + +PE L ++ R P+TR ++L +L F+R+SEL WSE+D + W Sbjct: 211 HAAILVAELPEFLETLNHNKARMFPVTRILMQLMMLTFVRTSELTETPWSEVDLKNEQWV 270 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP +R + K + R + H V L Q A L++++ + G + +F D KP+ Sbjct: 271 IPWQRMKMGKRKINPR----KVDHHVFLPKQGWAFLRELRTYTGGNQWLFPNQRDPKKPI 326 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S + +AL+ +GY K GHGFR++A L G +ERQ++H + + A+Y Sbjct: 327 SNGAILAALKRLGYAGK--HTGHGFRSLAKGILKTLGN-DISNIERQLAHSSGEAYGASY 383 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERF 381 + LEER++M+Q +AD++D + Sbjct: 384 -DRESFLEERKIMMQGYADYIDAVSRKI 410 >UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_PSEA7 Length = 395 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 127/384 (33%), Positives = 198/384 (51%), Gaps = 19/384 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V PNG K WR +++ GK ALG YP ++LADAR + +EARKL+ G++P + Sbjct: 25 LYLEVKPNGVKAWRYRFKLAGKGSWFALGDYPSVSLADARDKCEEARKLVKQGINPVQNR 84 Query: 61 KND--KVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + K EQ A TF+ VA EW K W E R L L+ +F ++G+ + ++ Sbjct: 85 QVERIKREQDSANTFEAVAKEWLAL-KDWEEVTKRRRLDMLQRVVFPSIGKMPVRQITPA 143 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 +L + G VAA ++ + I AV + D +P + A+ + QH+ A Sbjct: 144 HVLDILSKTAKRGAPTVAAEAKRTMSGIFELAVATLRADNDPVWPVRKALPANKTQHKTA 203 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L +I +LLT D++ + I+L R E A W+E D + ++W+IP R Sbjct: 204 LTTAQIGKLLTDFDNHRCGYQVNFCIQLMWWTLARPGEAAEAEWAEFDLDKALWSIPARR 263 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K R HLVPL QA+ +L+++ G +F G D +KPMS +++ Sbjct: 264 ------------MKARREHLVPLPRQAVEMLRRLHAISGDRMHLFPGRDDRNKPMSAHSI 311 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 AL+ +G+ HG RT + L E G + DA+E Q++H NSVR Y H A Sbjct: 312 RQALKALGWSG--TYSPHGTRTTGSTRLNEMG-YRPDAIEAQLAHAEPNSVRRTYNH-AT 367 Query: 359 HLEERRLMLQWWADFLDVNRERFI 382 +L+ERR M+Q WAD L++ + + Sbjct: 368 YLDERREMMQAWADKLELWKREVL 391 >UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombinase phage integrase family protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF6377 Length = 393 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 114/378 (30%), Positives = 194/378 (51%), Gaps = 20/378 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P G+K WR ++R GK+ A+G YP+++L+DAR RD AR+L+ G +P + Sbjct: 26 LFLEVTPGGNKLWRYRFRLAGKENTYAIGSYPDLSLSDARAERDAARELVKLGRNPAHVR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K +Q + TFK VA EW + + ++ ++ ++++ +G + E+ Sbjct: 86 QTVKAQQLSENSNTFKVVAEEWIEKRLANRTLKYRDQIRRAFVNDVYPKIGRFPLREITA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L I ++ +A ++Q +++ Y V + D +PA + GA++ + H Sbjct: 146 AQILVIITQMDKRDATTLALMVRQWISSVFCYGVVTLRADSDPAAAVRGAISRKDVNHSR 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + L+ + E + Y G T A+ L L+F+R+ ELR A WSE D + +IW IP Sbjct: 206 PMNLEELAEYFLAVGKYGGHRGTVIALYLLPLLFVRTVELRLAEWSEFDLDKAIWIIPSG 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K + H+VPL +A+A+L++++ + L+F G +P+S T Sbjct: 266 R------------MKRKRPHMVPLPERAIALLRELRSLTAGN-LLFPGMKHPSQPISATT 312 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +N AL M H FR A + L ES LW +A+E Q+SH + +AAY H A Sbjct: 313 LNRALEYMDLRG---WHCHDFRATASTHLYESQLWRSEAIEMQLSHKESDKTKAAYNH-A 368 Query: 358 EHLEERRLMLQWWADFLD 375 ++ +ER M+ WW L+ Sbjct: 369 KYWDERSKMMVWWGHRLE 386 >UniRef50_Q46Z79 Phage integrase n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Z79_RALEJ Length = 418 Score = 313 bits (802), Expect = 6e-84, Method: Composition-based stats. Identities = 135/394 (34%), Positives = 207/394 (52%), Gaps = 14/394 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKM--LALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L + P+G+K WR++Y+ G + L G YP + L+ AR RR+EAR LA G DP Sbjct: 32 LYLELLPSGAKKWRMKYQRPGSKSENLLTFGDYPAVGLSAARERREEARAQLAVGTDPAL 91 Query: 59 KKKNDKV--EQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + K ++ TF+ VA EW WS +A + + LE +L+ LG+ IA + Sbjct: 92 ARDLAKATVAEAARNTFRAVAEEWLKHRHDTWSASYAQKTKQLLERDLYPDLGQHPIASI 151 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS-CNRQ 174 LL + +E G E+ R I +YA+ +G + + M + + Sbjct: 152 TPAFLLTVARKIEARGAYEMPRRALVTAGQIFQYAIGTGRASIDASAGMVAQLKPRPPVK 211 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H P + ++P+LL +ID YTGRP T A++L +L FIR ELR+A WSE+D E + W + Sbjct: 212 HYPHVADTQLPDLLQRIDRYTGRPETIAAVKLAVLTFIRGGELRYAEWSELDLEKAEWHV 271 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P R T H+VPLS Q +A+L+ +KQ+ G + L+F G KP++ Sbjct: 272 PSGRMKGRLWHKL-----SGTPHVVPLSRQTIALLEDLKQYTGHYALLFPGAVSVLKPVT 326 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 +N +G+ K + HG R +A + L ESGL+ +E Q+SH N AAY Sbjct: 327 GEAMNKVFHSIGF--KGQQTVHGLRGLASTLLNESGLFDPRVIEAQLSHKETNKTIAAYN 384 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFISPFEYA 388 H A++L ERR ++QWWAD++D +P +A Sbjct: 385 H-AKYLPERRRVMQWWADYIDQRARATTAPQRHA 417 >UniRef50_Q4QL03 Prophage CP4-57-like integrase n=11 Tax=Haemophilus RepID=Q4QL03_HAEI8 Length = 419 Score = 313 bits (801), Expect = 8e-84, Method: Composition-based stats. Identities = 116/392 (29%), Positives = 198/392 (50%), Gaps = 23/392 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + LLV NGSK WR QY K+ +++LGVYPEI+L DAR RD R LLA +DP D Sbjct: 35 LFLLVKMNGSKIWRFQYYKPISKKRTLISLGVYPEISLKDAREIRDLYRSLLAKNIDPQD 94 Query: 59 KK--KNDKVEQSKARTFKEVAIEWHGTNK------KWSEDHAHRVLKSLEDNLFAALGER 110 + + K Q + T E+ EW K + E + K LE +LF LG Sbjct: 95 YRLQQEQKAIQERQFTLSEMGKEWLYLKKNEVDTGRLKEVTFIDIGKRLERHLFKVLGHY 154 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 +I+E+ + +K +E +G+L+ R+ IM Y+V G+I+YN ++ Sbjct: 155 SISEISAPLAIEKLKPLERAGKLDTLHRIIGYLNQIMIYSVNRGVINYNATADIGRVFIR 214 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 ++ P + +++P+L + + T TR A+EL LL R+ + W +DFE S Sbjct: 215 PIAENNPTIRPEQLPKLFEDLQNSTLEIETRCALELLLLTAGRAGAITQLEWENVDFENS 274 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY-GAHDLIFIGDHDS 289 + IP E+ K ++PLS QA+ IL+ +++ +F + Sbjct: 275 LLNIPKEKMKGRQGK--------VQDFILPLSKQAVTILRLLQKLNRCNSKFVFPSKKNP 326 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 +P+S+ T N AL +GY + + HG R++ +++ E+ ++ + +E ++H +SV Sbjct: 327 RQPISKETPNKALGRIGY--RNILTAHGLRSVFSTAMNEA-EFNSEIIEVCLAHFEYSSV 383 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 R Y +KA+++ +R +QWW +F++ + Sbjct: 384 RGTY-NKAKYMPQRIEYMQWWGNFVEEASDGK 414 >UniRef50_C6ALW6 Prophage integrase n=2 Tax=Pasteurellaceae RepID=C6ALW6_AGGAN Length = 413 Score = 313 bits (801), Expect = 8e-84, Method: Composition-based stats. Identities = 112/392 (28%), Positives = 184/392 (46%), Gaps = 27/392 (6%) Query: 1 MHLLVHPNGSKYWRLQY--RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L ++P G+K WR +Y + +G +P ITLA ARV+RDE LLA G+DP + Sbjct: 32 LFLEIYPTGAKKWRFRYERPITKARTKFNIGDHPSITLAQARVKRDEYNALLAQGIDPQE 91 Query: 59 KKKNDKV--EQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K + TF + A W KK D + + +E L +LG+ I ++ Sbjct: 92 HAKQKHQALQFQLENTFLKWAERWKENKEKKVKADTLRKDWRRIEMYLLESLGQIPIDKV 151 Query: 116 KTRDLLAPIKAVEM-------SGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV 168 L+ + +E + + R+ + I+ YA+ +G I +NP + Sbjct: 152 LPPLLIQALTPLEAMKDRRTGTADSDTLKRVIRLANEILTYAMNAGAIPFNPCLSVKDIY 211 Query: 169 ASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 + + P +E + +P LLT I +P T+ I LL +R SE A W+E D E Sbjct: 212 SFAPAESHPHIEPEELPLLLTDISESKAQPRTKDLILFQLLTMVRPSEASNAEWAEFDLE 271 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD 288 +WTIP E+ KM+ H VPLS+Q + +L+ ++ G +F + Sbjct: 272 NKVWTIPAEK------------MKMKHPHKVPLSSQTIRLLQHLQSQTGHKRFVFASRNK 319 Query: 289 SHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 ++PM+ +VN AL MGY K + HG R++ + + E + + +E ++H S Sbjct: 320 INEPMNSQSVNKALVDMGYKGKQD--AHGLRSIGRTYIGEKQMDGYEVLEMCIAHKVGTS 377 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 Y KA+ E+R ++Q W DF++ ER Sbjct: 378 TGKIY-DKADFFEQRIPIMQAWGDFVEQCAER 408 >UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria RepID=Q5P707_AZOSE Length = 415 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 124/383 (32%), Positives = 189/383 (49%), Gaps = 20/383 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P+G+K+WR ++R KQ M ALG YP + L DAR RDEAR+L+ G++P + Sbjct: 25 LCLEVRPSGAKFWRYRFRLADKQNMHALGEYPAMGLQDARRARDEARELVRKGINPSHHR 84 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 +K E+ + TF+ V EW N+ WS ++ +V + ++F +G+ IA+LK Sbjct: 85 GLEKAERILALGSTFETVTAEWIERNRPDWSANYIRQVRARMAGDVFPEIGQYPIADLKA 144 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LA ++ VE AA ++ + R+AV L + +P + AV H Sbjct: 145 AHVLAMLRKVEKR-SPTQAALVKTWVGGVFRFAVVEQLREDDPTFPLRRAVKPTQVNHHA 203 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L I L I + G + A+ L R +E+ ARW+ ID +A +WTIPP Sbjct: 204 ILRNDEIGAFLRAIAAAPGEVTVKEAVGLMWATACRINEVTGARWAGIDLDAGLWTIPPG 263 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K + H+V L+ QA+ IL++++ G + +F D +PMS Sbjct: 264 R------------MKAKQEHVVTLTRQAVEILRRVQVHTGTLEHVFPHRSDRKRPMSGEA 311 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 V R GY K HG R + +G W D +E ++H RN +R AY H A Sbjct: 312 VRDLFRRAGYAGK--FTPHGVRGTFSTIANGAG-WRADVIELCLAHQERNQIRRAYNH-A 367 Query: 358 EHLEERRLMLQWWADFLDVNRER 380 + L+ERR +LQWW D D + Sbjct: 368 QLLDERRELLQWWGDLSDQAKRG 390 >UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZI9_ACILW Length = 401 Score = 312 bits (799), Expect = 1e-83, Method: Composition-based stats. Identities = 111/386 (28%), Positives = 175/386 (45%), Gaps = 22/386 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V PNG K W +Y G K+ + LG YP ++L +AR RDE + + Sbjct: 26 LSLKVEPNGRKSWSYRYSLAGTNKRPRMKLGEYPVMSLKEARSVRDEYK---------FN 76 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHR------VLKSLEDNLFAALGERNI 112 +N + + +TF+++ EW K S + R K L+ +++ +G Sbjct: 77 NYENKPLHKKYIKTFQDICEEWLEFKIKNSFEDEPRCGVIQLAKKCLDQDVYPNIGLMPF 136 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 E+K DL+ IK +E E + I YAV G +YN A + + + Sbjct: 137 IEIKRYDLVKIIKKIESRNVKEPVKKAYSYLNQIYDYAVAMGYCEYNIAHGLHKILVNNK 196 Query: 173 -RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 +++ P L + L K++ P+ + A+ L +R EL D + I Sbjct: 197 IKKNYPHLNSDELSNFLAKLNQINTDPIIKKALLFKLYTGVRGGELLLCEPHHFDLDKKI 256 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W IP K VPLS QAL ++K + +F +++K Sbjct: 257 WKIPALHIKQYRRKVILGHD--IPDFFVPLSDQALEVVKSALVWSHGEKYVFSSPRNNNK 314 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 P+ NT+N +R MGY TK E+ HG R+ + L ESGL+ + +E Q+SH +N RA Sbjct: 315 PIHFNTLNLIIRKMGY-TKNELTSHGLRSTFSTILNESGLFQSNWIEAQLSHTDKNKTRA 373 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVN 377 +Y H AE+ +R M+QWW DF+D Sbjct: 374 SYNH-AEYFNQRMEMMQWWGDFIDSC 398 >UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IGA6_BORPD Length = 657 Score = 310 bits (795), Expect = 4e-83, Method: Composition-based stats. Identities = 119/394 (30%), Positives = 202/394 (51%), Gaps = 16/394 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L+V G K W +Y + GKQK +ALG YP ++L +AR RD+A+ L+A G+DP ++ Sbjct: 40 LSLMVSAAGGKSWMFRYSWLGKQKRMALGGYPALSLREARAERDKAQALIARGIDPQIER 99 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTNKK----WSEDHAHRVLKSLEDNLFAALGERNIAE 114 + A TFK V W +K + ++L+ ++ LG+ +I + Sbjct: 100 DQRRHAAKLAGEYTFKNVFDAWVEHRRKELKEGRQSTLSQILRIFNKDVLPTLGKMSIYD 159 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYA-VQSGLIDYNPAQEMA-GAVASCN 172 ++ LL + A+E A +++ + RYA V + ++ NPA ++ A Sbjct: 160 IRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRYALVIAEGLEVNPAADLDVVAEPKPP 219 Query: 173 RQHRPALELKRIPELLTKIDSYTGR-PLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 H P L L +PE L K+ Y R T+ + L L +R+ ELR A + D + Sbjct: 220 VAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRLLFLTGVRTGELRLAEPEQFDLDRGF 279 Query: 232 WTIPPE--REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQ-FYGAHDLIFIGDHD 288 W IPPE ++ ++ + + + ++VPLS QA+ I++ + A + + Sbjct: 280 WIIPPEVVKQLQDEMRKAGKRPQDVPPYIVPLSLQAIEIVRYLLGVMRPAQKYLLSHRSE 339 Query: 289 SHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 K +SENT+N A+++MGY+ + + GHG R ++L E G + + V+ Q+SH N Sbjct: 340 LKKRISENTLNKAVQLMGYEGR--LTGHGIRGTISTALNEIG-YPKIWVDAQLSHSDPNK 396 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVNRERFI 382 V +AY H A+++E RR M+Q WAD LD+ + + Sbjct: 397 VSSAYNH-AKYVEPRRRMMQDWADRLDLLEQGEV 429 >UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9U1_9GAMM Length = 399 Score = 310 bits (794), Expect = 6e-83, Method: Composition-based stats. Identities = 127/383 (33%), Positives = 199/383 (51%), Gaps = 19/383 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + PNGSK WR YR + KQ++LA+G +++LADAR +A+ + G DP ++ Sbjct: 26 LFLEIRPNGSKLWRYAYRLDSKQRLLAIGSLQDVSLADARAAMRQAKSQVKLGQDPVLQR 85 Query: 61 K--NDKVEQSKARTFKEVAIEWH-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K + E+S T E A +W+ G K WS H R + L+ + +G+ I E+ Sbjct: 86 KIAKARSEESALNTVAENAEDWYSGAEKSWSASHRDRARRYLDQRILPDIGKWPIREVTP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 D+L ++ E +G VA +Q +++ +A+ + D +P + A+ H Sbjct: 146 ADVLKLLRKAEKAG-PHVAIVTRQTLSSVFEHAIVNLRADADPTHPVRRAIKKPPVMHAV 204 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 A + +LL +D+Y G +T AIEL L F+R+ ELR A+W+ ID+EA Sbjct: 205 AHSAATMGKLLAGLDTYPGNRVTAIAIELLALTFVRTKELRTAKWANIDWEAE------- 257 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 P +K K R H VPL+ +A+A+L+++++ GA +F D KPMS Sbjct: 258 ---SPLLKIDAGEMKKRRKHWVPLAPRAVALLRELQEITGAGTYLFPNQRDPKKPMSREA 314 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 VN L+ +G D E+ GH FR A + L E+G + V+ Q++H N AAY H A Sbjct: 315 VNMGLKYLGMD---EISGHDFRATASTWLHEAG-YPSAVVDMQLAHAKTNKTGAAYNH-A 369 Query: 358 EHLEERRLMLQWWADFLDVNRER 380 E L +R M+ WAD L ++R Sbjct: 370 EFLPDRIKMMDRWADHLAKQKQR 392 >UniRef50_D0J426 Phage integrase n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J426_COMTE Length = 416 Score = 310 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 128/385 (33%), Positives = 209/385 (54%), Gaps = 13/385 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P GS+ W +YR +GK+ LALG YPE++L AR RD AR + G+DP + Sbjct: 27 LYLEVSPAGSRRWFWKYRKDGKEGRLALGRYPEVSLTAARKARDAARLQKSEGIDPAKAR 86 Query: 61 KNDKVEQSK--ARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K+ A TFK VA+EW+ +WS HA R+ + LE +LF +GER +A+++ Sbjct: 87 KLEKLVNPTGVADTFKAVALEWYEKQVPRWSPGHAERMHRQLERDLFPWIGEREMAQIQP 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL-IDYNPAQEMAGAVASCNRQHR 176 +LLA ++ VE G +E A R + RY + + + + + + + Sbjct: 147 MELLAVLQKVEARGAVETADRALMLARQVWRYWLPTASNTQRDITEGLKARLTPYRGTNF 206 Query: 177 PAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 PA+ E +R ELL + +Y G P R A+ L L++ R LR W+E+D +A++W IP Sbjct: 207 PAIVEPQRFGELLRAMYAYKGGPFVRTALLLAPLLYQRPGNLRMMEWAELDLDAALWKIP 266 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 + +K S + + H+VPL QA+A+L+++ G +F G D +PMS+ Sbjct: 267 SAK-----MKRSVQEKENGEPHVVPLPKQAVAMLRELLPLSGRGRYVFPGQRDHDRPMSD 321 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 N+V +AL +G + HGFR A + LV+ A+E ++H +++ +Y + Sbjct: 322 NSVRTALYSLGVGEEQSW--HGFRASARTMLVDQLDLDPLAIEANLAHAVKDANGRSY-N 378 Query: 356 KAEHLEERRLMLQWWADFLDVNRER 380 + ++L +R +Q WAD+LD RE Sbjct: 379 RTKYLAKRFDQVQQWADYLDRLREG 403 >UniRef50_Q1NGR6 Putative phage integrase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGR6_9SPHN Length = 428 Score = 310 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 122/393 (31%), Positives = 208/393 (52%), Gaps = 30/393 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V PNG + W YR+ KQK + G YP +++ ARV R+E + L+ G DP + K Sbjct: 25 LNICVLPNGRREWCFSYRFHHKQKSITGGDYPLMSIDRARVWREEMKAALSAGKDPANIK 84 Query: 61 KNDKVE-QSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + K E Q++ TF+++A EW + WS+ +A + + LE ++F +G+ ++ + R Sbjct: 85 RQLKYEDQAERTTFRQLAYEWMVAKRPGWSDRYAGVIERRLEADIFPTIGKLSVRSILPR 144 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS-CNRQHRP 177 D+L +K +E G E+A R++ + I R+ + G + +P +++ + HR Sbjct: 145 DMLGALKCIEDRGATEMAHRVRAYCSEIFRFGIPDGRVLTDPCRDLGTVMRKRAAVTHRS 204 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS---IWTI 234 + +K +P +++ TG L+ A+ T+L +R++E R A+WSE + +W I Sbjct: 205 KIPIKELPHFYAALNADTGSRLSHLALRWTILTMVRTTETRHAQWSEFEGLGGPEPLWRI 264 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD--------LIFIGD 286 P ER KMR HLVPL QA+A+L++IK+ +F Sbjct: 265 PAER------------MKMRVEHLVPLPPQAVALLREIKELNVYGKYGNERFGQYLFPVI 312 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 + +S N + L+ +G K HGFR++A + L E+GL+ D +E Q++H+ Sbjct: 313 GNQGDTISSNRMLVLLQRLGVGDKA--TVHGFRSIASTVLNETGLFKPDWIELQLAHVPG 370 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 VRA Y + A +L RR ML+WWAD+LD + Sbjct: 371 G-VRAVY-NAARYLSHRRQMLEWWADYLDKAEQ 401 >UniRef50_D2MI75 Phage integrase family protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI75_9BACT Length = 398 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 100/390 (25%), Positives = 183/390 (46%), Gaps = 22/390 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P GSK W ++ +GK+ + LG +P ++L +AR R + R+ +A+G DP +K Sbjct: 24 LFLKVSPGGSKSWVQRFTIKGKRHDVGLGGWPVVSLQEARERAFDNRRAVAHGRDPLAEK 83 Query: 61 KNDKVEQSKARTFKEVAIEWHGTN-KKWSE-DHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + + TF+ VA +++ N +W H R L+ +E F G+ + + Sbjct: 84 QKA-SKAAAVPTFRAVARKYYEENLPRWKAGRHTDRWLQVVEKYAFPVFGDVPVDRVGRE 142 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQE-MAGAVASCN--RQH 175 D+L + + + + E A +L+ R I+ + G + N A E + GA+ S ++H Sbjct: 143 DVLRMLTPIW-TAKPEYARKLRHRVRLILDWCQAHGYVHTNIAGEQIGGALPSMPSVKEH 201 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 +L + + L I++ + + +L +R E R A W EI++E WTIP Sbjct: 202 HRSLPYAEVSQALDLIEASGASLSAKLCLRFLILTAVRPGEARNATWEEINWETKTWTIP 261 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 + K + H VPLS +A+ +L++ + G LIF KP+S+ Sbjct: 262 AGK------------MKAKAEHRVPLSREAMQVLERASRVRGESPLIFPSSLKRAKPLSD 309 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T+ LR +G K HGFR+ + E +E ++H N++ AY Sbjct: 310 MTLTKLLRDVGLREKT--VPHGFRSSFRTWAGEQTNSPTPVIELCLAHSVGNAIEKAYT- 366 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFISPF 385 +++ L++R+ ++Q W ++ + P Sbjct: 367 RSDLLQKRQRLMQEWGRYVTGEGRANVVPL 396 >UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157:H7 RepID=B3A9A3_ECO57 Length = 412 Score = 308 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 116/389 (29%), Positives = 192/389 (49%), Gaps = 26/389 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V G K WR +Y + K++ +G +PE +LA+AR RDE R+++A GVDP Sbjct: 29 LLLNVSKAGGKVWRFRYSHPITKKRQTYTIGRFPEFSLAEAREVRDELRRMIARGVDPVT 88 Query: 59 KKKNDKVEQS--KARTFKEVAIEWHGTNK--KWSEDHAHRVLKSLEDNLFAALGERNIAE 114 +KKN K+E S +TF+ VA W K + + + + + L G+ +I + Sbjct: 89 EKKNRKIEMSLKNLQTFEAVANAWFAFKKGSELRKPTLYNIEYEVYKYLVPFFGKYSIEK 148 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 + + + AV L+ +L R IM YAV G + NP ++ A + Sbjct: 149 ITAPVAINALDAVSDKNALQ--KKLISRLNEIMNYAVNCGALKANPLLKIKTAFTGKKNK 206 Query: 175 HRPALELKRIPELLTKIDSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 AL ++R+PE L+ DS + A+ +L +R E A WSEIDF++ +W Sbjct: 207 SLAALPVERLPEFLSWWDSVPHTYQIAHNALLFQILTMVRPGEAIKAEWSEIDFDSGLWI 266 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP + K H+VPLS+QA++IL+ +++ +F PM Sbjct: 267 IPAHK------------MKCHREHVVPLSSQAISILRTMQEI-KRGRYVFFSSRTKDAPM 313 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 NT+ + + + K V HGFR+M + L E G ++ D +E ++H + + +R Y Sbjct: 314 GRNTIKTPIAASKF--KGIVTLHGFRSMWSTLLNEEG-FNPDVIEAALAHKSGDKIRDIY 370 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERFI 382 ++ +LE+R++M+QW DF D R+ I Sbjct: 371 -NRTIYLEQRKIMMQWVGDFFDDARKGVI 398 >UniRef50_A5EUW8 Bacteriophage P4-like integrase n=3 Tax=root RepID=A5EUW8_DICNV Length = 399 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 133/382 (34%), Positives = 199/382 (52%), Gaps = 18/382 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + +V PNGS WR++Y GK++ LALG YP ++L++AR R+ + GVDP + Sbjct: 25 LFAVVMPNGSILWRMRYVLAGKRRELALGKYPAVSLSEARQIVLLYREQIERGVDPHAQH 84 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 +Q + V + K S + L +++ + G R +AE+ + Sbjct: 85 VERHKKQDGVTVAEAVELLLSEKAKYCSASYLESCRSRLSNHVLSRFGARALAEVSEDEW 144 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYA-VQSGLIDYNPAQEMAGAVASCNRQHRPA- 178 A I ++ G+ A R+Q + + +++GL NP E+ G V Q+ P Sbjct: 145 RALINWLDNGGKNYTAIRVQDLAGELYKTVRLKTGLKIANPILEIRGTVKKKPAQNYPRI 204 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 R ELL ID + GR A++ L+F R ELR W E+DFE ++W IP E+ Sbjct: 205 TNPARFGELLHAIDYFNGRWQVYLALKFLPLVFCRQIELRRMVWQEVDFERALWCIPAEK 264 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 KMR HLVPLSTQA+AIL+Q +Q DL+F G + +P+S NT+ Sbjct: 265 I------------KMRRAHLVPLSTQAIAILRQAEQLRC-SDLVFCGVRNPRQPISVNTI 311 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 SALR +G+ E+ GHGFR A + L E G W V+ Q++H R+SV +AY H AE Sbjct: 312 GSALRTLGFGHD-EMVGHGFRGTAATLLNELG-WDSHIVDFQLAHWQRSSVSSAYNH-AE 368 Query: 359 HLEERRLMLQWWADFLDVNRER 380 +L +RR M+Q WAD+ D + + Sbjct: 369 YLTQRREMMQAWADYCDELKAK 390 >UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria RepID=B2I529_XYLF2 Length = 410 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 105/378 (27%), Positives = 176/378 (46%), Gaps = 16/378 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + V+P G WR +YR G+ + L LG YP ++L +AR++RDEA L+A G P +K Sbjct: 26 LSVEVYPTGGIVWRFRYRLAGRYEKLTLGKYPALSLRNARLKRDEAASLVAMGTSPARQK 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + KV + A T ++ A + + + + L+ ++ +G++ + E+ ++ Sbjct: 86 QLAKVTAADAMTVRDFAERFFREIQSRDRKDSTMPRRYLDKDILPFVGDKPMREVTAEEI 145 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + I + G A +++ + YAV GL+ NP + AL Sbjct: 146 RSLIWRKKEQGFDATAGQIRGVLKRLCDYAVTCGLMPTNPVLALPMRHVYKAVSRDRALS 205 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 I L + + R + A+ L LL +R SEL ARW + + + W IP E Sbjct: 206 PDEIRLFLRAVWASRIRRQFKLALHLILLTMVRKSELLLARWDHVHLDQAQWHIPAEH-- 263 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 SK H+V LS QA+ + + ++ G L+ G +P + N +N Sbjct: 264 ----------SKTGKPHIVYLSRQAVVLFEALRVLAGGSALVMPGSGTLTRPFAHNALNH 313 Query: 301 AL-RVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 AL + M + H R A + L E G W+ D VE+ ++H VR Y ++AE+ Sbjct: 314 ALGKAMQWQGIHAFTIHDLRRTASTWLHEHG-WASDVVEKALNHSIGG-VRGVY-NRAEY 370 Query: 360 LEERRLMLQWWADFLDVN 377 ++RR MLQ WADF++ Sbjct: 371 ADQRRQMLQCWADFIEKQ 388 >UniRef50_A1WP11 Phage integrase family protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WP11_VEREI Length = 387 Score = 305 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 119/377 (31%), Positives = 191/377 (50%), Gaps = 32/377 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WR Y EGKQ G +P+++LA+AR AR +GV P Sbjct: 26 LYLFVTPAGGKSWRANYLREGKQATRTYGRWPDVSLAEARKAHAAAR----DGVVPATV- 80 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKW--SEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 +F+ +A W + H +V +LE +F +G+R I + Sbjct: 81 --------AVPSFETIARAWLKLKLPTLSNGKHQSQVANTLERFVFPKIGKRPIDTIHRP 132 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN-RQHRP 177 +L+ ++AV++ GR+E A R+ R A+ YA +GLI+ +PA + + S ++ Sbjct: 133 ELVDVVQAVQLDGRVETAHRVAGRIAAVFDYAQDAGLIESHPASHLVRVLHSRKVKKPMA 192 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 ++ L+ I Y P+T ++L F+R ELR RWSE + ++W IP E Sbjct: 193 SIAPAEAGALMRAITDYD-EPVTGLGLQLLAHTFVRVGELRAMRWSEFKEDGAVWVIPAE 251 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K+R H+VPLS QA AI+ Q++ + + P+SENT Sbjct: 252 R------------MKLRLPHVVPLSLQAQAIVGQLRLLNAEREFVMDSPLRPGHPLSENT 299 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 AL +GY + + HGFR +A + L E ++ D +ERQ++H ++VRAAY ++A Sbjct: 300 FLFALYRLGYRGR--MTAHGFRALASTVLNEQSGFAHDVIERQLAHKETDAVRAAY-NRA 356 Query: 358 EHLEERRLMLQWWADFL 374 ++L +RR ++QWWA +L Sbjct: 357 QYLPQRRELMQWWAQWL 373 >UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria RepID=Q3SF40_THIDA Length = 440 Score = 305 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 113/426 (26%), Positives = 197/426 (46%), Gaps = 54/426 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYE-GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 +++ + P G + W L+YR GKQ+ + LG YP +LADAR RD+ + L G+ P Sbjct: 26 LYIEIMPTGKRRWGLKYRIPTGKQETIRLGDYPAYSLADARTWRDDCKALAGRGLSPMAL 85 Query: 60 KKNDKVEQSKAR--------------------------------TFKEVAIEWHGTNKKW 87 K+ D + + A T + A W+ + Sbjct: 86 KRGDPIPEDAAPAAKELAQFFIRNWCMKAVEKAKAKEAEAKAADTVEAFAWRWYAEIVEP 145 Query: 88 SEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIM 147 + + + + L+ + A+G + IA++ D+LA ++ G ++A + + + Sbjct: 146 ANSNPRNIKRILDKDAIPAIGSKQIADVTVTDILAITDKIKNRGADQMALQTRNVLKRLF 205 Query: 148 RYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELT 207 YA+ +NPA + + + AL + I LL I + + + A+ L Sbjct: 206 AYAIAREKTTFNPAAAIEAKFIAQAKSRDVALSPEEIGRLLRAIYQSSMKRAHKLALHLL 265 Query: 208 LLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALA 267 +L +R SEL A+W E+D E + W IP ER K HLVPLS QA+A Sbjct: 266 ILCMVRKSELTEAKWEELDLEKAEWAIPGER------------MKKDKPHLVPLSRQAVA 313 Query: 268 ILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLV 327 + +++K + +F KP++ N +N+ +R + D + + H FR A + L Sbjct: 314 MFEELKGLASGSEWVFPSRSSLKKPIAHNALNTVVRALEADVR-DFVIHDFRRTASTHLH 372 Query: 328 ESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER-----FI 382 E+G ++ D +E+ ++H + +R Y ++A++ ++RR MLQWWADF+D + I Sbjct: 373 EAG-FNSDWIEKALAHETKG-IRGVY-NRAQYADQRRDMLQWWADFVDSQIQDGRGKVII 429 Query: 383 SPFEYA 388 PF A Sbjct: 430 GPFGKA 435 >UniRef50_C8NCE3 Phage integrase family site-specific recombinase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCE3_9GAMM Length = 401 Score = 304 bits (779), Expect = 3e-81, Method: Composition-based stats. Identities = 126/390 (32%), Positives = 198/390 (50%), Gaps = 25/390 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V +G KYWRL YR G KQ+ ++ GVYP+++L AR RRDE + L+A G+DP Sbjct: 27 LCLQVTSDGKKYWRLYYRMPGSKKQQTVSFGVYPKVSLKQARQRRDEVKLLIARGIDPKL 86 Query: 59 KKKNDKVEQSKA--RTFKEVAIEWHGTN---KKWSEDHAHRVLKSLEDNLFAALGERNIA 113 K + +++ A TF +VA W KKW + H LE ++ +G+ + Sbjct: 87 AAKQLRQDRTVALENTFADVAKRWLEHRAEVKKWGKQHQRATRSMLERYMYPRIGDYPVT 146 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQS-GLIDYNPAQEMAGAVASCN 172 E++ +L ++ ++ +G++E + +L TT + RYA+ + + YNPA +++ + + Sbjct: 147 EIEPTQILRVLQELQAAGKIETSHKLLSATTQVFRYAMITIRICKYNPAADLSELLVTGK 206 Query: 173 -RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 R + I LL +D YTG P R L LIF R +E+R RW EIDFE + Sbjct: 207 SVPFRHITDPGEIGRLLVALDEYTGSPQARGLARLHPLIFTRPTEIRLMRWDEIDFEQRL 266 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W + + + + VP S QA I+ ++ G D +F H +K Sbjct: 267 WR-----------RSDDETVRRKNVNAVPFSRQAWEIIAGLRLVTGRTDYVFCNIH-RNK 314 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 P S L+ +GY K + HG+R A + L + VE+Q+ H +N VR Sbjct: 315 PFSAGAEGKVLKSIGYHEK--IVPHGWRHTASTLLHNQ-DYDSIWVEKQLGHTDKNEVRG 371 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRERF 381 Y H A++LE+RR MLQ WAD+LD+ + Sbjct: 372 TYNH-ADYLEQRRKMLQEWADYLDMLKANV 400 >UniRef50_A3UDD1 Symbiosis island integrase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UDD1_9RHOB Length = 406 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 113/384 (29%), Positives = 198/384 (51%), Gaps = 19/384 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + V P G +YWR +YR+ GK +M+ LG YP ++L AR +RD R+LL G++P ++ Sbjct: 26 LSIEVTPKGDRYWRFRYRFNGKAQMMGLGRYPSVSLKKARSKRDHYRELLDEGLNPSLER 85 Query: 61 KNDKVE--QSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + + E Q + +F +A E+ + + + + L++L L L I E+ Sbjct: 86 QTRQQELAQLEQSSFGSIATEFLRKRETEGAAPATLKKLRALLRLLLPDLAPLPIQEITA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 LL ++A E G+ VA + I RYA+ +G + +P+ + A+ + + Sbjct: 146 PQLLQVLRATESRGKHVVATEARALAGRIFRYAIATGRCEQDPSYMLREALVTPRVKGYA 205 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A E + LL +I++Y G L + + L F+R +LR A+W + D EA++W P Sbjct: 206 AIREPEAFGALLARIETYEGDTLIKNGLLLLAHTFVRPGQLRLAQWEDFDLEAALWRAPA 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +R +KM H+ PLS+Q + ++K++ + L+ P+S+ Sbjct: 266 DR------------TKMSRFHITPLSSQVVCLIKEMHRNKADDTLVMGSRVKPGHPISDM 313 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T N ALR +G V HGFR A + L E ++ D +ERQ+ H+++N +R Y + Sbjct: 314 TFNKALRSLGVMGDVH-VAHGFRKSASTMLNEQ-EYNYDWIERQLDHVSQNRIRGIY-NA 370 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 A++L+ R M+Q W+D+LD ++ Sbjct: 371 AQYLQGRTRMMQEWSDYLDRLKDD 394 >UniRef50_D0SUB2 Predicted protein n=2 Tax=Acinetobacter RepID=D0SUB2_ACILW Length = 396 Score = 301 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 109/381 (28%), Positives = 196/381 (51%), Gaps = 26/381 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L++ G KYW ++ G++K +LG YP+++L AR E + + V D K Sbjct: 42 LSLIITTKGQKYWNVRVTVHGERKSESLGPYPDLSLKKARELAYELKHRYSRSVLHEDLK 101 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 F+EVA +W K+ +++ D L+ AL + I +++ ++ Sbjct: 102 ----------PYFEEVAEDWFNNQKETWSSKHISNVRASLDELYIALANKRINQIQAPEI 151 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 L IK +E G LE+A R R +M+YA+ G NPA ++ A+ + ++ +L Sbjct: 152 LQIIKKIEARGSLEIAKRTLSRCGMVMKYAIAHGYRYDNPAGDLVYALKNKRVKNLASLS 211 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 +PE L +I +Y T AI L +L +R SEL ARW E D E W IP ER Sbjct: 212 ASEMPEFLRRIKAYPADAQTHHAIVLIMLTGVRVSELLQARWEEFDLEGRKWDIPEER-- 269 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 K R +H VPL+ +A L+ ++ +L+F ++ +PM ++ + Sbjct: 270 ----------MKNRLSHRVPLTDMMIAELQALR-LTHNQELLFPHRLNNKEPMRSESILA 318 Query: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 ++ GY + + HGFR++ + + ES L++ DA+ERQ++H+ +N +R+AY ++A++ Sbjct: 319 VIKRSGYAGR--MTTHGFRSLFSTVVNESNLFNPDAIERQLAHVPQNRIRSAY-NRAQYW 375 Query: 361 EERRLMLQWWADFLDVNRERF 381 +ER ++QW+ + ++ ++ Sbjct: 376 DERVRLMQWYGEQVEGWMAQY 396 >UniRef50_A4VPC8 Site-specific recombinase, phage integrase family n=6 Tax=Proteobacteria RepID=A4VPC8_PSEU5 Length = 455 Score = 301 bits (770), Expect = 3e-80, Method: Composition-based stats. Identities = 105/386 (27%), Positives = 185/386 (47%), Gaps = 28/386 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV P G K WR +YR +GK+ + A+G +P+++LA+AR R++AR L+ G+ P ++ Sbjct: 81 LFLLVKPTGCKLWRWKYRLQGKENLFAIGSFPQVSLAEARTAREKARALVKQGIHPAHER 140 Query: 61 KNDKV---------EQSKARTFKEVAIEWHGTNKKWSEDHAHRVL-KSLEDNLFAALGER 110 + K ++++ +F +VA + K ++R + L Sbjct: 141 QQVKQRNLEALAERKRARESSFAKVAQAYLTEIKPVFAYSSYRTKESRIRKYLSPKFDGM 200 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 ++++ + + ++ + G A ++ +AI +AV GL++ NP + G + + Sbjct: 201 PMSDIGVKQIRPLLEECKTHGAWA-AIHVKGDLSAIFEFAVVRGLVEANPIPSLRGLLRA 259 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 + + A+ ++I + + Y G P T + L L R E A W E DFE + Sbjct: 260 PASESKAAMTREQIQKFYQALRGYRGYPETALCLRLIALTACRPGEAADAEWEEFDFEDA 319 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +W P + K R H+ PLSTQA+A+LK +++ G +F Sbjct: 320 VWRRPAAK------------MKARRDHISPLSTQAIAVLKGLQRITGGGRYLFPH-RSGK 366 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 + N + A+R M H +RT + E+G + DA+ERQ++H+ N VR Sbjct: 367 GFTTPNRLTYAMRDMNLG--RGTTPHCWRTTFSTWANENG-FRPDAIERQLAHVESNKVR 423 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDV 376 A Y +KA L++RR +LQ WA +L Sbjct: 424 ATY-NKALLLDQRRSLLQAWAGYLST 448 >UniRef50_Q5LS43 Site-specfic recombinase, phage integrase family n=4 Tax=Rhodobacterales RepID=Q5LS43_SILPO Length = 406 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 115/384 (29%), Positives = 193/384 (50%), Gaps = 27/384 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G+K W + GK+ + +G ++LA+A + RKL G DP K Sbjct: 41 LFLKVDDTGAKRWVQRIVIRGKRTEIGMGSASLVSLAEASETALQNRKLARAGGDPLQAK 100 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + TF+E A + H ++ ++ HA + + +LE F +G+ ++E+ T Sbjct: 101 RTAQ----ALLTFEEAARKVHKIHEPTWRNKKHAAQFISTLETYTFPRIGKLKVSEVATA 156 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC--NRQHR 176 D+LA ++ + + + E A R++QR +M++A+ +G NPA+ ++ A+ +QHR Sbjct: 157 DVLAVLQPIWLE-KPETARRVRQRIGTVMKWAIANGWRTDNPAEAISQALPKQIDTQQHR 215 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 AL ++PE L + + T+ A+EL +L RSSE+R A WSE D E IWT P Sbjct: 216 KALPYDKVPEFLETLKASDAGDFTKLALELVVLTASRSSEVRKAEWSEFDLEQGIWTRPA 275 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER K + H VPLS +AL IL + ++ L+F G P+S+ Sbjct: 276 ER------------MKSKKEHRVPLSPRALEILIEARELCTGEGLVFPGTKIGK-PLSDM 322 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+ + +GYD V HGFRT + E RD E ++H+ ++ AAY + Sbjct: 323 TLLKLTKALGYDVDV----HGFRTSFKTWAQERTNTPRDVSEAALAHVLKDKAEAAYA-R 377 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 ++ E+RR +++ WA ++ N Sbjct: 378 SDFFEKRRKLMERWASYISSNLGS 401 >UniRef50_Q9RM38 Integrase (Fragment) n=56 Tax=Enterobacteriaceae RepID=Q9RM38_ECOLX Length = 304 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 160/259 (61%), Positives = 198/259 (76%), Gaps = 1/259 (0%) Query: 132 RLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKI 191 +LEVA+R +Q + IMR+AV LID NPA + G R+H PAL L+R+PELL +I Sbjct: 41 KLEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPALPLERLPELLERI 100 Query: 192 DSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRG 250 +Y GR LTR A+ L L +FIRSSELRFARWSEIDF +WTIP REPI GV++S RG Sbjct: 101 GAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRG 160 Query: 251 SKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTK 310 +KMR H+VPLS Q++AILKQIK G ++LIF GDH+ +KPM ENTVN ALRVMGYDTK Sbjct: 161 AKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTK 220 Query: 311 VEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWW 370 ++CGHGFR MACS+L+ESGLW++DAVERQMSH RN+VR AYIHKAEHLE R+ M+QWW Sbjct: 221 KDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWW 280 Query: 371 ADFLDVNRERFISPFEYAK 389 +D+L+ RE + P+ K Sbjct: 281 SDYLEACRESYAPPYTIGK 299 >UniRef50_B5J5X2 Site-specific recombinase, phage integrase family protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J5X2_9RHOB Length = 383 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 125/390 (32%), Positives = 209/390 (53%), Gaps = 29/390 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP---- 56 M L V P+G K +RL YR G Q+ +G YP +LADAR++ R L N DP Sbjct: 1 MFLEVLPSGRKVFRLAYRLAGNQRTKLIGDYPATSLADARLKASAFRLDL-NSSDPEIVE 59 Query: 57 --GDKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNL---FAALGERN 111 ++ ++ + T+KEVA + ++ + A + L+ L + ALG Sbjct: 60 VATRPRQTVTTKKRQTTTWKEVADGYLMMRQQSNP--APKTLRKLNYQIGVTVDALGNPR 117 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC 171 + E+ +D+L + + SGR+E A ++ R + I RYA GL+ ++PA A+ Sbjct: 118 VDEITAQDILDVVNPIASSGRVETAHEIRARFSQIFRYAGARGLVTHDPAAFTIDAMIKR 177 Query: 172 NRQHRP-ALELKRIPELLTKIDSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 R + + +LL I+SY P+ A+ L+ +F R++ELR RW EID+++ Sbjct: 178 RRGEFAGITDPAAVGKLLHAIESYREANPIVGAALMLSAYLFPRNTELRGMRWDEIDWDS 237 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 W +P +R KM H+VPL +QA+ +L+ ++++ +L+ D Sbjct: 238 LRWEVPGQR------------MKMNRDHIVPLPSQAIDLLRFLQKYDFGSELVLPSPRDP 285 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 + +S+ T N+ALR MG+ + V HGFRT A ++L E G W+ D +ERQ++H+ N V Sbjct: 286 KRMVSDMTFNAALRRMGFKSDRHVH-HGFRTTASTNLNEMG-WNYDWIERQLAHVPANKV 343 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 R++Y +KA++L+ R M++ +AD+LD R+ Sbjct: 344 RSSY-NKAQYLDGRTEMMRAYADWLDARRQ 372 >UniRef50_D0D2S4 Site-specfic recombinase, phage integrase family n=1 Tax=Citreicella sp. SE45 RepID=D0D2S4_9RHOB Length = 479 Score = 298 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 113/375 (30%), Positives = 188/375 (50%), Gaps = 27/375 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV PNGS+ W + GK++ + LG +TLA+AR RK+ G DP + Sbjct: 124 LYLLVKPNGSRSWVQRIVIRGKRREMGLGSASLVTLAEAREAALANRKVARAGGDPIQAR 183 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + TF+E A + + ++ + HA + + +LE F +G + ++ T Sbjct: 184 QEA----LAVLTFEEAARKVYEMHRPTWRNPKHASQFINTLETYAFPKIGAVKVGDVNTN 239 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ--HR 176 D+L + + + + E A R++QR +M++AV G NPA+ ++ A+ +R+ HR Sbjct: 240 DVLRVLTPIWTT-KPETARRVRQRIGMVMKWAVAKGWRQDNPAEAISQALPKHDRRKAHR 298 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ +P + + + LT+ A+E +L RS E+R A WSEID EA+IWT+P Sbjct: 299 KAMPYAEVPGFIATVKASKAGALTKLAMEFLILTAARSGEVRGASWSEIDSEAAIWTVPA 358 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +R K + H VPLS +AL IL + + DL+F G +P+S+ Sbjct: 359 DR------------MKAKREHRVPLSPRALEILSEARAISDGSDLVFPGSR-RGRPLSDM 405 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T++ R +G+ V HGFRT E R+ E ++H RN AAY + Sbjct: 406 TLSKLTRELGFAVDV----HGFRTSFRMWAQEQTDAPREVAEAALAHTIRNQAEAAYA-R 460 Query: 357 AEHLEERRLMLQWWA 371 ++ E RR +++ W+ Sbjct: 461 SDLFERRRSLMERWS 475 >UniRef50_B5JZM6 Site-specfic recombinase, phage integrase family n=2 Tax=Rhodobacteraceae RepID=B5JZM6_9RHOB Length = 411 Score = 297 bits (761), Expect = 3e-79, Method: Composition-based stats. Identities = 110/378 (29%), Positives = 186/378 (49%), Gaps = 28/378 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V +G+K W + GK+ + LG ++LA+AR E RKL G DP K Sbjct: 45 LFLKVVTSGAKRWVQRIVVRGKRTEIGLGSASLVSLAEARETALENRKLARAGGDPLQAK 104 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + TF+E + + H ++ ++ HA + L +LE F + ++E+ T Sbjct: 105 RT----SEALLTFEEASRKVHKIHEPTWRNKKHAAQFLSTLETYTFPRMSNLKVSEVTTA 160 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN--RQHR 176 D+LA ++ + + + E A R++QR +M++AV +G NPA ++ A+ +HR Sbjct: 161 DVLAVLQPIWLE-KPETAKRVRQRIGTVMKWAVANGWRQDNPAGAISQALPKQKQPVKHR 219 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 +L + L + S T+ A+ELT+L RS E+R A WSEID + WTIP Sbjct: 220 KSLPYDEVSGCLVAVRSSRAFNATKLALELTVLTACRSGEVRLAEWSEIDLAKAEWTIPA 279 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +R K H +PLS +A+ +L+ K L+F P+S+ Sbjct: 280 QR------------MKASKEHRIPLSGRAVEVLEAAKALDDGTGLVFPSTT--GNPLSDM 325 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T++ ++ +GYD V HGFRT + E +R+ E ++H +N AAY + Sbjct: 326 TLSKLVKGLGYDVDV----HGFRTSFKTWCQERTTTAREVSEAALAHSIQNKAEAAYA-R 380 Query: 357 AEHLEERRLMLQWWADFL 374 ++ E+RR +++ W+ F+ Sbjct: 381 SDLFEKRRKLMEQWSCFV 398 >UniRef50_A7H0X5 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter curvus 525.92 RepID=A7H0X5_CAMC5 Length = 396 Score = 297 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 109/383 (28%), Positives = 180/383 (46%), Gaps = 29/383 (7%) Query: 1 MHLLVHPNGSKYWRLQY--RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 +++ V P+G+K + ++ R G+ K ++LG YP I+L AR +R E +K LANG +P Sbjct: 27 LYIQVMPSGTKTFIYEFKSRSSGRYKRISLGQYPAISLLMAREKRLEFQKALANGDEPMS 86 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K +F+ V EW K+ S A + E G+ +I + Sbjct: 87 EAKQAMT------SFEAVFDEWFKFKQKEVSTKQAFTHKRYYERFFLPKFGKDDIKTITK 140 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG--AVASCNRQH 175 R +L ++++ + E R + + R+AV + ++++P + H Sbjct: 141 RQILEAVESLNKEAKFETLDRALSSISQLFRWAVMNEYLEHSPTYGIDKNALFKMPKVNH 200 Query: 176 RPALELKRIPE-LLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 A+ L+ I +Y G A LL R +R A+WSEI+FE IW I Sbjct: 201 YAAIFDDDGIRKLVNNIKNYDGDIRVITAALFGLLSAQRPFNVRSAKWSEINFEKKIWEI 260 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E+ KM+ H+VPL +QA+ +L K++ + +F + P+S Sbjct: 261 PKEK------------MKMKEAHIVPLCSQAIKLLSSFKKYEFRSEFLFPSVKSTKIPIS 308 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVES---GLWSRDAVERQMSHMARNSVRA 351 +N+V S LR +GY ++ HGFR M + E +E + H RN V+A Sbjct: 309 DNSVRSMLRNLGYTND-DIVPHGFRAMFSTICHEHIKEHGLEERIIELCLDHAERNKVKA 367 Query: 352 AYIHKAEHLEERRLMLQWWADFL 374 AY H A++L+ER ++QWW D+L Sbjct: 368 AYNH-AKNLKERAQLMQWWGDYL 389 >UniRef50_A8EUF6 Putative phage integrase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EUF6_ARCB4 Length = 405 Score = 297 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 105/389 (26%), Positives = 185/389 (47%), Gaps = 31/389 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V NG+K++R + Y K+K ++ G+YP+I+L +AR R++A++ L ++P + K Sbjct: 31 LYLVVKSNGTKFFRFDFSYTKKRKSMSFGIYPDISLKEARELREKAKEQLKQNINPIEAK 90 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 ++ TFK + +W W L +++ A+G++ I+ ++ D Sbjct: 91 SSN---FGNISTFKYITEKWLKLMTSEWKHVTYELNENRLRMHVYPAIGDKPISSIEILD 147 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG--AVASCNRQHRP 177 +L I+ ++ E+A R+ I +YAV G +N ++ A HR Sbjct: 148 ILNIIQKLQEKEYFEIAERILNVIERIYKYAVTYGYTKHNIIADIDKRTVFAKKIVIHRA 207 Query: 178 A-LELKRIPELLTKIDS----YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 + I ELL I S Y T +A+ + + +R +R W+E++FE Sbjct: 208 TLTKENEIKELLKDIKSYGELYKADISTIYALNIAPYLALRPYNIRLLEWNEVNFEKEYL 267 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY-GAHDLIFIGDHDSHK 291 IP + K ++PLS QAL ILK IK + +F + K Sbjct: 268 DIPANK------------MKTNKDFVLPLSKQALEILKTIKPYSFDRSKYVFPSPTSNLK 315 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVE---SGLWSRDAVERQMSHMARNS 348 P S+ T+N AL +GY K + HGFR M + E + D +E ++H N Sbjct: 316 PFSDATLNHALMKLGYKDK--ITSHGFRAMFSTIAHEKIKEHGFHSDIIESCLAHAETNK 373 Query: 349 VRAAYIH--KAEHLEERRLMLQWWADFLD 375 ++AAY K ++ +E++ ++QWW D+L+ Sbjct: 374 IKAAYNRESKMKYYDEKKGLMQWWTDWLN 402 >UniRef50_C6V8W5 Integrase n=4 Tax=Enterobacteriaceae RepID=C6V8W5_ECOBD Length = 294 Score = 296 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 159/267 (59%), Positives = 211/267 (79%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 +LVHPN S+YWRL+YR GK+K LALGVYPE++L++AR +RDEARKL++ G+DP ++K+ Sbjct: 3 MLVHPNSSRYWRLRYRILGKEKTLALGVYPEVSLSEARAKRDEARKLISAGIDPCEQKRA 62 Query: 63 DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLA 122 KV +F+ +A WH +NK+W++ H+ +VLKSLE ++F +G R+I +L T DLL Sbjct: 63 KKVVPDLQLSFEHIARRWHASNKQWTQSHSDKVLKSLETHVFPFIGNRDITKLNTPDLLI 122 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELK 182 P++A E E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+ + RQHRPAL+L Sbjct: 123 PVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLS 182 Query: 183 RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIP 242 R+PELL++I SY G+P+TR A+ L LL+FIRSSELR+ARWSEID E ++WTIP EREP+P Sbjct: 183 RLPELLSRIGSYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIENAMWTIPAEREPLP 242 Query: 243 GVKHSHRGSKMRTTHLVPLSTQALAIL 269 GV SHRGSKMRT HLVPLS QA+ L Sbjct: 243 GVNFSHRGSKMRTPHLVPLSKQAVPSL 269 >UniRef50_A9VZC1 Integrase family protein n=3 Tax=Alphaproteobacteria RepID=A9VZC1_METEP Length = 412 Score = 296 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 111/379 (29%), Positives = 185/379 (48%), Gaps = 27/379 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V P+GSK W L+ +G+++ + LG +TLA+AR + RKL +G DP ++ Sbjct: 42 LYLVVEPSGSKRWLLRTIVQGRRRDIGLGGAGLVTLAEAREKALAYRKLARDGGDPLAER 101 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + + TF E A + H +K + HA + + +L LG R + +++T Sbjct: 102 RKAR---ATVPTFAEAAEQVHEEHKASWKNPKHAAQWITTLRTYANPHLGARRVDQIETP 158 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSG-LIDYNPAQEMAGAVASC--NRQH 175 D+L + + ++ + E A R++QR ++ +A +G NP + +A + +H Sbjct: 159 DVLRALSPIWLT-KGETARRVRQRIGTVLDWAKAAGHRTGDNPVESVAKGLPKQGERDEH 217 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 AL +P +T++ S R A E +L R+SE+ A W EID ++WT+P Sbjct: 218 HAALPYAEVPAFVTRLQSSDHGEAARLAFEFLILTAARTSEVLRAEWREIDEAEALWTVP 277 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R K H VPLS ++L I+++ K G IF G + KPMS Sbjct: 278 AAR------------MKAGREHRVPLSKRSLEIVRRAKLLAGDSAFIFPG-RSTGKPMSN 324 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 ALR M K+ V HGFR+ E+ R+ E ++H N V AAY Sbjct: 325 MVFLMALRRM----KLTVTAHGFRSSFRDWAAEATSLPREVAEMALAHTIENRVEAAY-R 379 Query: 356 KAEHLEERRLMLQWWADFL 374 + + L +RR M++ W+ F+ Sbjct: 380 RGDLLAKRREMMEQWSTFV 398 >UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C3XC22_OXAFO Length = 427 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 119/400 (29%), Positives = 208/400 (52%), Gaps = 40/400 (10%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L V P+GSK WRL++ + GK+ L+LG YP+++L R +R+EAR+LLA G+DP + Sbjct: 31 LYLEVLPSGSKLWRLKFQKPSGKESRLSLGAYPDVSLEQVRKKREEARRLLAQGIDPSED 90 Query: 60 KKNDKVEQSKA---------RTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGE 109 +K K + + R F+ +A+ + + K + ++D+ + +L+ E +LF A+G+ Sbjct: 91 RKEQKEAKQEQDVIRAFKDDRMFERIAMRLYASKKGRTTDDYRNTMLRQFELHLFPAIGK 150 Query: 110 RNIAELKTRDLLAPIKA------VEMSGRLEVAARLQQRTTAIMRYA--VQSGLIDYNPA 161 +NIAE++ R+L KA + +A +L Q + A S NP Sbjct: 151 KNIAEIEGRELFTLFKAVSEKLNSKGKPMTYMARKLCQWAAEVYDLANVENSSFALNNPC 210 Query: 162 QEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFAR 221 + + + +H + +P+ + +++Y G LT+ AI + L +R + +R A+ Sbjct: 211 RSVIKFLPKHQTEHMARIGFTELPQFIQALEAYGGHILTKSAIWMLLYTGMRQTSIRRAQ 270 Query: 222 WSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF-YGAHD 280 WS+ D IW PE+ + H++PL QA+++LK I+ G + Sbjct: 271 WSDFDLNKGIWNRKPEKVD-------------KNIHIIPLPEQAISLLKDIQLLATGNSE 317 Query: 281 -LIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVER 339 L+F MSE + A+ MG+ + GHG R++ + L E G R VE Sbjct: 318 NLVFPSVFAGQLKMSEAAIGQAIERMGFQ----MTGHGLRSVVSTGLNELGFTPR-LVEV 372 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 Q+ H +++ AAY + A+HLEER+ M+Q WA++L+ +E Sbjct: 373 QLGHKKGDAIEAAYNN-AQHLEERKKMMQRWANYLNSFKE 411 >UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FEDC Length = 418 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 115/402 (28%), Positives = 197/402 (49%), Gaps = 33/402 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LL+ P+G K W+ +R + +G YP+I+L AR +AR+L+A G++P K Sbjct: 26 LFLLIKPSGYKSWKYDFRINSTRGSYTIGKYPDISLKQARQEHLQARELVAQGINPKQIK 85 Query: 61 KNDK-VEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K ++ + + F +W + +E + + ++ NL L ++NI E T D Sbjct: 86 TQRKVNDELQTKRFSYYMNQWL-NKQVLAESTFKDLKQRIDKNLIPFLDKKNINEYTTAD 144 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ----- 174 LL + ++ G E A RL + + G+I+ NPAQ +A + +++ Sbjct: 145 LLKIMLSISDRGAKETAIRLANVARRVFNEVLILGIIETNPAQGLAELLPKPDKRIDNNF 204 Query: 175 -HRPALELKRIPELLTKIDSYTGRP--LTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 H + E + LL +ID+ + R A++L L+F+R +RF +W I+F+ +I Sbjct: 205 GHITSTE--ELKILLNQIDAPSARQDFAVTQALKLMPLVFLRPYNIRFLKWEYINFDENI 262 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 +P K VPL+TQA+ ILKQ++Q G +F+ Sbjct: 263 IKLPATEL------------KNNKPLDVPLATQAVTILKQMQQVTGHKTYVFVTAQGKDT 310 Query: 292 PMSENTVNSALRVMGYDTKVE------VCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 P+SENT +AL+ + T + + HGFR A + L E G + D +E Q++H Sbjct: 311 PLSENTTTNALKRIINPTTNKPYGTGYMTSHGFRHTASTMLNELG-YEADIIELQLAHTN 369 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER-FISPFE 386 ++ +RA Y +KA+ + +R M+Q WAD+LD + I P + Sbjct: 370 KDRIRATY-NKAKWMNKRIAMMQDWADYLDGIKAGTNIVPIK 410 >UniRef50_A8EWJ5 Phage integrase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWJ5_ARCB4 Length = 410 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 98/391 (25%), Positives = 190/391 (48%), Gaps = 22/391 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V PN +K W+ +Y Y GK+K + YP+++L AR +RD +LL +G+DP + Sbjct: 30 LYLEVTPNNAKIWKFRYTYNGKRKKTSFQSYPKVSLKQARKKRDNYNELLFDGIDPIEYY 89 Query: 61 KNDKVEQSKART--FKEVAIEWHGTNKKWSEDHAHRVLK-SLEDNLFAALGERNIAELKT 117 K K + T FK + +W K S ++ K +E+++ +G + I ++K Sbjct: 90 KEQKELKQIEDTSSFKNIFTQWLEMEKSKSGLAQYQWKKTRIENDILPFIGNKKIKDIKI 149 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG--AVASCNRQH 175 +D+ + + A++L +I YA G I+ N ++ ++S Sbjct: 150 QDVTNVLI-EKNKTAPVTASKLFGYLKSIYSYAKTKGYIEINLLSDINKTHIISSSQVIS 208 Query: 176 RPALELKR-IPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 P + K + +L+ I +Y G + A++L L + +R+ L +WS IDF+ + I Sbjct: 209 YPKITEKENLKDLVNSIYNYQGFYSVKNALKLVLHLPLRAGNLCNLQWSNIDFDNKLLII 268 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 + + K +PL+ + + IL + K + G IF+G ++ P++ Sbjct: 269 SRDEMKVK--------DKNFDDFRMPLTDEVINILNEQKSYTGYQKFIFLGTNNRT-PIN 319 Query: 295 ENTVNSALRVMGYDTKV---EVCGHGFRTMACS---SLVESGLWSRDAVERQMSHMARNS 348 + N AL++MG+D +V ++ HGFR S +L +S + ER + H ++ Sbjct: 320 VESPNKALKIMGFDDEVNGRKITLHGFRGTFRSLIDTLDIDSNFSFETKERALDHHEKSK 379 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 V AY HK++++ + ++ +W+D++ + Sbjct: 380 VVRAYTHKSDYINQLIPLMNFWSDYILSLKN 410 >UniRef50_Q1QLT5 Phage integrase n=2 Tax=Alphaproteobacteria RepID=Q1QLT5_NITHX Length = 416 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 131/379 (34%), Positives = 198/379 (52%), Gaps = 13/379 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HL V G K WR +YRY K+K+L +G YP+I+L DAR RD A+ L +G DPG K Sbjct: 30 LHLYVSTAGGKLWRFRYRYADKEKLLTIGPYPDISLVDARAARDAAKASLRDGRDPGVIK 89 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K+ S A TF+ +A EW+ NK +W E HA VL SLE +F LG +A++K Sbjct: 90 KLRKLANVTSTANTFEAIAREWYDLNKGQWVERHADDVLTSLEREVFPVLGNIPVADIKA 149 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++LA ++ +E + E A R++QR +A+ YA+ SG D +PA + A+A + +P Sbjct: 150 PEVLAVLRGIEARAK-ETARRVRQRMSAVFVYAISSGRADADPAATVQKAMAPMVKGRQP 208 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI-DFEASIWTIP 235 A +L E+L K ++ P T+ A+ + L +R L WSE D E +W IP Sbjct: 209 AITDLDAAREMLGKAEAEKAHPATKLALRIIALTVVRPGTLITTPWSEWTDMEDGVWRIP 268 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R + H VPLS QAL ++ ++ G + F +H+ MSE Sbjct: 269 AARMKLRLQHKDDDA----RDHWVPLSRQALEAVEALRTLTGRGPIPFPNTRHAHRTMSE 324 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 N + L GY + HG+R S + E + ++ ++H+ ++ V AY + Sbjct: 325 NAIGYLLNRAGYHHR--HVPHGWRATFSSVMNERFPADKPIIDLMLAHVPKDKVEGAY-N 381 Query: 356 KAEHLEERRLMLQWWADFL 374 +A HLE RR + Q WAD + Sbjct: 382 RALHLERRRKLAQEWADLI 400 >UniRef50_Q3JXH9 Integrase or site-specific recombinase n=24 Tax=cellular organisms RepID=Q3JXH9_BURP1 Length = 414 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 108/379 (28%), Positives = 187/379 (49%), Gaps = 18/379 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQK-MLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 + L V +GSK+WR +Y GKQ+ ++ +G YP ++L AR R +++A GV P Sbjct: 36 LVLEVMTSGSKFWRYRYSLHGKQQPVVTIGEYPAVSLTAARERARRYAEIVAGGVSPVAD 95 Query: 60 KKNDKVEQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + D+ T E A W S ++ ++LE +++ A+G ++++++ Sbjct: 96 ARKDRGAVKSLDTIHEFAEYWIEQQMMGKSAEYLRTTRRALEKDIYPAIGGKSVSDVTPG 155 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 D+LA ++ G ++A + I YA+ L+ NPAQ + + Sbjct: 156 DVLAICDRIKKRGAPKMALSTRNILKRIYEYAIARQLVTSNPAQAIVARFVATQASRDRV 215 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L I +L + + + R + AI L +L +R SEL ARW E D +ASIW IP ER Sbjct: 216 LSPNEIGRVLRAVYASSIRRPLKLAIHLLVLTMVRKSELIEARWDEFDLDASIWRIPAER 275 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K H V L+ QA+A+L+++ +H +F + +P++++T+ Sbjct: 276 ------------MKKDREHWVYLAPQAVAMLRELHATRTSHQYVFPSSRGADRPIAKSTL 323 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 N A+R + D + H FR A + L E G DA+E+ ++H + ++ Y ++AE Sbjct: 324 NQAVRALDMDVQ-HFVLHDFRRTASTHLHEMGQ-PSDAIEKALAHSIKG-IKGVY-NRAE 379 Query: 359 HLEERRLMLQWWADFLDVN 377 + +ERR + WADF+D Sbjct: 380 YADERRRITALWADFVDAQ 398 >UniRef50_C0VMY9 Integrase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMY9_9GAMM Length = 429 Score = 293 bits (751), Expect = 5e-78, Method: Composition-based stats. Identities = 121/390 (31%), Positives = 189/390 (48%), Gaps = 29/390 (7%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LL+ +KYWR+ YR K LA+G YP I+L AR +RDE +K+LANG+DP + Sbjct: 34 LYLLIDETEAKYWRMDYRRPVTQKYNTLAIGTYPTISLEQARSKRDEFKKMLANGIDPAE 93 Query: 59 KKKNDKVEQSK--ARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 ++ N K EQ + TF + A EW +K H ++ L ++ +G+ +AEL Sbjct: 94 QRNNKKREQLQTLENTFSKFAAEWLDI-RKHEGKVDHETIRKLNRDILPFIGKLPVAELT 152 Query: 117 TRDL-LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 T L A+ G LE A R++ +++ ++ +I YNPA ++ H Sbjct: 153 TEQLERDVTDALVERGALESARRIKSIINMVLKLPLKRRIITYNPAPDII-LPQPTKGNH 211 Query: 176 RPALELKRIPELLTKI-----DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 + K + +LL K D R T AI+L+ I+ R E+R W +DFE Sbjct: 212 NAVTDEKELADLLRKTWRLTKDFPRTRIRTELAIKLSAYIYQRPGEVRTLLWESVDFENR 271 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 + SK H+VPLS QA ILK++++ +F S Sbjct: 272 CLSFAA--------------SKTNQDHIVPLSIQAYDILKELEELRTTSKYVFPSVKTSS 317 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 + MS +T+ L+ +G+ K HGFR A + L E + D VE Q++H ++ Sbjct: 318 ECMSTDTLTQVLKRLGFKGK--HTAHGFRATARTLLDEEIEYRTDIVEHQLAHKVKDPNG 375 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDVNRER 380 AY ++ + L RR M+Q WAD+LD R+ Sbjct: 376 TAY-NRTKFLRRRREMMQLWADYLDTLRQG 404 >UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID=B2UB26_RALPJ Length = 415 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 111/385 (28%), Positives = 178/385 (46%), Gaps = 25/385 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + +LVHP GSK WR QY GK++ + +G YPEI ++DAR R E R ++ G DP + + Sbjct: 31 LFVLVHPGGSKAWRYQYMLSGKRRSVLIGSYPEIGVSDARDRHAEYRAMVEQGTDPAEHR 90 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKW--------SEDHAHRVLKSLEDNLFAALGERNI 112 + DK E+ + +E + + KW +E + ++ LE ++ +G + + Sbjct: 91 RQDKAERKAKESLQEDEGLFKAFSLKWIDERLATKTEGYRSQIKSRLERFVWPVIGRKAL 150 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 ++K LL I+A A ++ I YA+Q L++ NPA + G + Sbjct: 151 EDVKPSHLLEIIEAR--RATPNTAEGVRVIIQQIYNYAIQKLLVESNPAVPLRGVITVPK 208 Query: 173 RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 +H L + + P T A L + R SE+ A+W+E D + + W Sbjct: 209 AEHHRHLSESELGAFWRALGRQGAHPATTAAARLLVYSMCRKSEVLRAKWAEFDLDKAQW 268 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 IP ER K R H V LS QA+ +L+ ++ G + + P Sbjct: 269 DIPAER------------MKSRRPHRVYLSRQAIELLEIMRAISGDGVYVLPSVKIASVP 316 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 ++E T+N + + + E HG R A + L E G +SRD VE ++H R+ A+ Sbjct: 317 LAEATLNHLFKRLDFGV-PEFSPHGTRGTAATLLREHG-FSRDVVELLLAHTERSQTAAS 374 Query: 353 YIHKAEHLEERRLMLQWWADFLDVN 377 Y H E ERR LQ+ AD +D Sbjct: 375 YHH-HELEAERRKALQYLADEIDRQ 398 >UniRef50_D0SVD1 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVD1_ACILW Length = 399 Score = 292 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 103/381 (27%), Positives = 185/381 (48%), Gaps = 21/381 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYE-GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++ LV +G K W+ +Y+ GK + LG YP+++ AR + E L+ G K Sbjct: 34 LYFLVKKSGVKNWQYRYKNSEGKWAWMGLGAYPQVSAQLARQKAREFTSALSKGESLKSK 93 Query: 60 KKN-DKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K ++ ++ ++ F+ + EW T KW E + KS+E ++ G+ N E+ Sbjct: 94 KVLLEERKELESFYFENLMREWLDTKSSKWGEATYTKAQKSIEKHIIPVFGQGNYKEITP 153 Query: 118 RDLLAPIKAVEMS-GRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 ++ + ++ + G +L +A G I+ NP + M+ + + + Sbjct: 154 KEWFDFFQGLQRTLGIHTQIEKLVSYVRGCYDWAKFKGKINSNPIEGMSKHLDAYESGNM 213 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 + + +P LL KI + R + +EL +++F R ELR A+W + DF+ ++WT P Sbjct: 214 DFVTVDELPALLKKIRNNKKRAI-GIGLELLMMLFPRPGELRMAKWEQFDFKKALWTKPA 272 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 E +K R H VPLS Q + +L +++ + +F +K +S+ Sbjct: 273 EM------------TKTRQEHQVPLSKQVITLLTELRSIQPESEFLFPSRLSVNKTISDM 320 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T N AL +GY K HGFR +A + L ++ +E ++H + V+ Y K Sbjct: 321 TFNLALNRLGYKGKQN--PHGFRHLASTILNDAFSDQEQVIEVCLAHK-KKGVKGVY-DK 376 Query: 357 AEHLEERRLMLQWWADFLDVN 377 ++HL+ERR+++QWWAD+LD Sbjct: 377 SQHLDERRVLMQWWADYLDEL 397 >UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJJ0_ACIJU Length = 406 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 113/387 (29%), Positives = 197/387 (50%), Gaps = 20/387 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V P G K WRL+Y K+ ++LG YP ++LA+AR +++E + LL +G++P +K Sbjct: 25 LYIEVRPTGKKVWRLKYTLHSKEGTISLGEYPSVSLAEARKKKEEIKVLLKDGINPVQEK 84 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + E + + TFK +A E+ K S+D+ + +S+E +++ A+G + I E+ + Sbjct: 85 RKLHQENLIANSNTFKAIAEEYIVEGMKYKSKDYIDQFKRSMEKDIYKAIGHKPIREVTS 144 Query: 118 RDLLAPIKAVEMSGRL--------EVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA 169 D+L+ +K R A + + + +M+YA+ + + +P + A+ Sbjct: 145 ADILSILKNTITRVRKLSHYGTGEAAANQNRLFISLVMKYAIVTLRAENDPTYAVKNAIE 204 Query: 170 SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 S +H L+ L T+++ Y G R A + +R+SE+R +WS +DFE Sbjct: 205 SPETEHARPLDKDERIRLRTRLELYGGTTTVRNACLAMMYTMLRASEIRRMQWSYVDFEE 264 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 + P + R +K HLVP+S Q A+LK+ + +F + Sbjct: 265 RLIEFP----KASRRRKQERSNKKNHIHLVPMSDQLFALLKEQFEISQYQTYVFSAPFKN 320 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 + ++ T+N AL +G EV H FR A + L E G + D + +Q++H+ N Sbjct: 321 DEMLARTTLNRALVFIGM---PEVTTHDFRATASTLLNEKG-YKPDWINKQLAHVEENKT 376 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDV 376 RA Y H A++LE RR MLQ WAD +D Sbjct: 377 RATYNH-AKYLESRRKMLQDWADIVDS 402 >UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QCE7_9RHIZ Length = 418 Score = 291 bits (744), Expect = 3e-77, Method: Composition-based stats. Identities = 104/400 (26%), Positives = 189/400 (47%), Gaps = 35/400 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+G++ W +Y ++ K + L LG ++LA AR +AR+ L G DP + K Sbjct: 28 LYLRVKPSGARSWVFRYMHDRKPRYLGLGSAASVSLATARSLAGDARRQLDLGQDPIEAK 87 Query: 61 KNDKVE----QSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 + + E +++A TFKE A + ++ + H + +L L+ G +A Sbjct: 88 RAAERETAADKARAMTFKECAEAYMAAHEPSWKNAKHCEQWHSTLRRYLYPKFGGIAVAL 147 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSG-LIDYNPAQE-------MAG 166 + T + I+ + S E A+R++ R ++ +A G NPA+ + Sbjct: 148 VTTEMVFEAIQPIWHS-MPETASRVRGRIEVVIDWAKARGAFSGENPARWRGHLANLLPK 206 Query: 167 AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 +H A+ +P L++++ + TG LT A+E T+L R++E A+WSE D Sbjct: 207 PSKVAKVEHHAAMPFDDLPALMSELRAATG--LTSRALEFTILTAARTTEALGAQWSEFD 264 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 E IWT+P R K H VPLST+A+ I+K+++ ++ +F G+ Sbjct: 265 LEKKIWTVPAVR------------MKAGKDHRVPLSTRAVEIIKELETV-KRNEFVFPGE 311 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 + +S ++ LR + + E+ HGFR+ E+ + VE ++H Sbjct: 312 -KPGRHLSNMSMLMLLRRL---KRGELTVHGFRSTFRDWAAETTSFPNFIVEMALAHAIE 367 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFE 386 + V AY + + LE+RR ++ W + + R ++ F Sbjct: 368 SKVEGAY-RRGDLLEKRRALMVAWMQYCAKAKMRPVADFS 406 >UniRef50_Q0BR52 DNA integration/recombination/inversion protein n=6 Tax=Alphaproteobacteria RepID=Q0BR52_GRABC Length = 380 Score = 290 bits (742), Expect = 5e-77, Method: Composition-based stats. Identities = 126/371 (33%), Positives = 203/371 (54%), Gaps = 33/371 (8%) Query: 15 LQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKARTFK 74 ++YRY GK+K+L+ G YP ++LA+AR+RR +A+ +L G DPG K TF+ Sbjct: 1 MKYRYGGKEKLLSFGAYPGVSLAEARLRRAKAKVVLGEGGDPGAGNK-----PRTQMTFE 55 Query: 75 EVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRL 133 E A +WHG HA R+L LE + F LG+ ++ + D+LA ++ VE G L Sbjct: 56 EAARKWHGHRLDALDAGHATRLLTRLERDAFPVLGKLGLSVITPTDVLAMVRRVEARGAL 115 Query: 134 EVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV-ASCNRQHRPALELKRIPELLTKID 192 +V+ RL+Q + I R+A+ G + +PA+ + + +H P + +P L+ ID Sbjct: 116 DVSRRLKQHVSQIYRFAIAHGWAERDPAEHLGQLLKPKPRTRHMPRIGRSELPALIRAID 175 Query: 193 SYTG------RPLTRWAIELTLLIFIRSSELRFARWSEI-DFEAS--IWTIPPEREPIPG 243 Y G R +TR A+ TLL ++R++E R ARW E D + + +W +P ER Sbjct: 176 GYDGEETPRRRAVTRAALLFTLLTWVRTNETRHARWEEFEDLDGASPVWRVPAER----- 230 Query: 244 VKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALR 303 KM H+VPL+ +A+L++++ Y D +F+G+ +P+S+NT+ A Sbjct: 231 -------MKMVREHVVPLAPAVVALLQEVR-VYSLADYVFVGE-KPDQPISQNTMIYACY 281 Query: 304 VMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEER 363 MGY + HGFR +A + E+ + D +E ++H+ R+ VR AY + A +L R Sbjct: 282 RMGYRGR--QTVHGFRGLASTWANEAECYQPDWIEMALAHVERDEVRGAY-NAALYLSPR 338 Query: 364 RLMLQWWADFL 374 R ML+ WA F+ Sbjct: 339 RRMLEDWAGFI 349 >UniRef50_D0CDZ4 DNA integration/recombination/inversion protein n=4 Tax=Acinetobacter RepID=D0CDZ4_ACIBA Length = 402 Score = 290 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 111/391 (28%), Positives = 188/391 (48%), Gaps = 32/391 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L + +GSKYW Y GK+ L+LG YPE++L DAR RD+ +KL+ G+DP Sbjct: 33 LYLRIDQSGSKYWIFNYTRPFLGKRNDLSLGTYPEVSLEDARTIRDKYKKLIKQGIDPAM 92 Query: 59 KKKNDKVEQSK--ARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 ++ K ++ K TF+ +A W ++ + ++ L +++ + E +L Sbjct: 93 ERIETKSQKQKEAENTFRVIAELWL-HKRELEQKQDEETIRRLNHDVYPYISELTFPQLT 151 Query: 117 TRDL-LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 L K + G L VA RL+ I + A + LI YNP +++ + + Sbjct: 152 LEILETKVFKRIVERGALSVAKRLKSDLNQIFKSARKKKLIQYNPIEDIE--LPKPQAGN 209 Query: 176 RPA-LELKRIPELLTKIDSYT-----GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 PA E + + +L KI +Y+ T+ A+++++L F R E+R + E Sbjct: 210 FPAVTEEQDLAPMLNKIWNYSKLYPRCLLTTQVALKISVLTFQRPGEIRMLKKEFYYREE 269 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 + SK + H+VPLS QA +++ I + + IF+G D Sbjct: 270 RCFKFTA--------------SKTKQLHIVPLSDQAFDLIESIIDLHPYSEYIFVG-RDG 314 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 +S+NT+NSAL+ +GY E HGFR A + L E D +E Q++H +++ Sbjct: 315 KTVISDNTINSALKRLGYGG--EQTAHGFRATARTMLDEILEQRVDFIEHQLAHKVKDNN 372 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 AY ++ + L RR M+Q WAD+L+ Sbjct: 373 GTAY-NRTKFLNNRREMMQEWADYLESLLSD 402 >UniRef50_A3ZAX6 Prophage CP4-like integrase n=2 Tax=Synechococcus RepID=A3ZAX6_9SYNE Length = 426 Score = 288 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 120/388 (30%), Positives = 183/388 (47%), Gaps = 27/388 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V +GSK WR YR++G ++ +G YP + LADAR + E + G+DP + Sbjct: 27 LYLWVARSGSKTWRKDYRWQGARRTFTIGPYPAVRLADARKQALELNTWIKAGIDPRTQV 86 Query: 61 KNDKVEQSKART--FKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + Q+++ + F ++A W + WS + + + L + ALG+ +I + Sbjct: 87 PTQQRNQAESSSRPFVQIAQAWFEHHSASWSPRYCRDMREKLNHFVIPALGQLDIEAISR 146 Query: 118 RDL-LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 D+ + + G E A R T ++ +AV L NPA + +A+ H Sbjct: 147 SDIETQLLAPILARGANEQARRCNDVTRRVIEHAVDLELRQDNPAVKARKVIAATRVTHY 206 Query: 177 PALELKRIPELLTKIDSYT----GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 + +PELL ID + + A+ L +L +R SELR ARWSE+D E W Sbjct: 207 HRISWVELPELLEVIDRFERQRLAERSSLIALRLMMLTLVRPSELREARWSEVDTEGRQW 266 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH-- 290 IP ER K R H+VPLS+QA + + G DL+F + Sbjct: 267 IIPAER------------MKTRVRHIVPLSSQARHLFDMQRPITGHTDLVFHTPNHRGSG 314 Query: 291 --KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 + MS ++ LR MG+ + HGFR ++ +E R E+Q++H NS Sbjct: 315 ELRVMSNGCLSMLLRRMGFQGR--QTPHGFRGFGQTNCIEQLKIPRVVTEKQLAHADGNS 372 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDV 376 V AY AE+LEER MLQ WAD LD Sbjct: 373 VSRAY-DWAEYLEERSDMLQRWADLLDQ 399 >UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae RepID=A7JSX8_PASHA Length = 413 Score = 288 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 108/388 (27%), Positives = 180/388 (46%), Gaps = 25/388 (6%) Query: 1 MHLLVHP--NGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDP 56 ++L V P GSK W Y + L +G YP ITLA+AR D R L+ G+DP Sbjct: 31 LNLRVKPLPKGSKIWIFNYTNPQTKNRTNLTIGRYPLITLAEARTICDGYRSLIEKGIDP 90 Query: 57 GDKKK--NDKVEQSKARTFKEVAIEWHG---TNKKWSEDHAHRVLKSLEDNLFAALGERN 111 ++KK + E TF+ VA + K + + LE+++F +G+++ Sbjct: 91 QEEKKRLQQEAENRVNDTFRNVAESYFNGIYKEKAKNPITREKNWIRLENHIFPYIGDKH 150 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC 171 + E+K + L+ +++ + +L Q +A+M +A+ G+I+ + + Sbjct: 151 VEEIKVKALVDIY--SKVADKSNTLKKLHQLVSAVMDHAITQGIIESHNCRLAVKNFYIK 208 Query: 172 NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 P +EL+ +P+L T + + T + + L +R +E A W EIDFE + Sbjct: 209 PSTPNPTIELEELPQLFTDLHNAKLSKQTYALVCWSFLTALRPNEAVNAEWKEIDFEKKL 268 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W IP E+ K + H VPLS+QAL IL+ +K + +F G + K Sbjct: 269 WNIPKEKMKGKADK--------KRPHSVPLSSQALKILEMMKMHSNSSPFVFPGRSSNSK 320 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA--RNSV 349 PMS TVNS L+ GY K + HG R + L + R E +SH+ + + Sbjct: 321 PMSNATVNSTLKRNGY--KDRLTAHGIRAFVKTFLSSRKV-DRHVSESILSHLLEGGDDL 377 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVN 377 Y ++ + LEER ++Q D+ + Sbjct: 378 ENTY-NRYDFLEERVPVMQLLGDYCEQC 404 >UniRef50_A7JWM6 Possible bacteriophage integrase n=3 Tax=Pasteurellaceae RepID=A7JWM6_PASHA Length = 404 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 101/377 (26%), Positives = 182/377 (48%), Gaps = 21/377 (5%) Query: 10 SKYWRLQY---RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK----KKN 62 +K W Y + + +G YP+++LA+AR++RDE L+ G+DP + ++ Sbjct: 39 AKVWIYSYISPKTGKRSTKNRIGSYPQMSLAEARLKRDELNTLVLQGLDPFEHLAKMQRE 98 Query: 63 DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLA 122 K +Q ++F +W + K + L+ LE++LF + + D + Sbjct: 99 AKEKQESIQSFAYKWADWKLSKGKCKPKTMEKCLQRLENHLFPRFEGYTLEDFTLTDTIN 158 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELK 182 + + + R+ I+ YAV G I++NP + A +S + H+PA+ + Sbjct: 159 RLTDL-DRIMPDTLHRIAGNLIEILDYAVLCGRINFNPISVIKKAFSSVSTTHQPAIMPE 217 Query: 183 RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIP 242 + E + + P + +E LL +R E +WS+ID+E IP +R Sbjct: 218 ELAEFMQDLQKSNRTPQIKLLVEWQLLNILRPFEAVAVQWSDIDWETKTLNIPADRMKGG 277 Query: 243 GVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSAL 302 + H VPL+ QA+AIL+++K++ G H IF D +KP + TVN+A+ Sbjct: 278 -----------KNPHSVPLTKQAIAILEEMKKYNGHHKHIFTHRTDRNKPANSQTVNNAI 326 Query: 303 RVM-GYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLE 361 + + G K + HG R++A + L E +E +SH +++V +AY H+ L+ Sbjct: 327 KRLSGGKYKGLLVAHGLRSIASTYLHERFTTETLVIEACLSHTNKDTVMSAY-HRKNWLD 385 Query: 362 ERRLMLQWWADFLDVNR 378 RR ++Q WADF++ + Sbjct: 386 RRRGIMQEWADFVEQCK 402 >UniRef50_A7JZW2 Site-specific recombinase, phage integrase family protein n=2 Tax=Vibrio sp. Ex25 RepID=A7JZW2_VIBSE Length = 471 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 107/415 (25%), Positives = 186/415 (44%), Gaps = 58/415 (13%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L + NGSK W Y K+K + LG YP +TL + R E RK + G+DP Sbjct: 52 LYLRIRKNGSKNWLFIYTDFSTKKRKKMGLGSYPNMTLDEVRKVAKELRKQMTKGIDPKL 111 Query: 59 KKKNDKVEQ--SKARTFKEVAIEWHGTNK------------------------------- 85 ++ K+++ TFK +A + + Sbjct: 112 FREKQKLDRLVESQLTFKAIAEKMLLKEEIQETTNREKLIVEERERARIKGTVFGQDEID 171 Query: 86 ----KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQ 141 K H R+ L+ NL+ LG + + +++ I+ ++ G+LE R Sbjct: 172 RITNKVRSSHRKRLF--LKRNLYPKLGNLPLTYITAAGVISVIEPMQAKGQLENVKRACC 229 Query: 142 RTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTR 201 +M++AV S +I N ++ A H + + E++ + + +P+TR Sbjct: 230 IANQVMKFAVNSNIIKSNCLADIKDNFAKSKVTHMLKVPPNELGEVMAIMSNNQMKPVTR 289 Query: 202 WAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPL 261 A E+ + R+ EL RW +I+ + +WTIP +K + HLVPL Sbjct: 290 CAFEMQMHTMARADELAAMRWCDINVKNKLWTIPA------------FYTKGKREHLVPL 337 Query: 262 STQALAILKQIKQFYGAHDLIFIGDHDSH--KPMSENTVNSALRVMGYDTKVEVCGHGFR 319 + L IL+ I+ G H +F D + +S VNS+L + K + HGFR Sbjct: 338 NDYTLGILEFIRPISGEHIHVFPSDKPNTKFPHISPYAVNSSLNLT--SLKGRLVSHGFR 395 Query: 320 TMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 +A + L E + DA+E ++H+ +N+ RA+Y + A +L+ER +LQ+W+D++ Sbjct: 396 GIASTYLNEHKQFREDAIEMCLAHLDKNTTRASY-NSALYLDERYEILQFWSDYI 449 >UniRef50_B9D1P3 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter rectus RM3267 RepID=B9D1P3_WOLRE Length = 395 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 112/386 (29%), Positives = 188/386 (48%), Gaps = 30/386 (7%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 +++ V P+G KY+ L+Y+ + K K L LG +PE +LA AR R + + + +G+D Sbjct: 31 LYIFVDPSGRKYFALEYKSPADNKIKRLNLGDFPEFSLAMAREERFKLEQKVRDGIDVKH 90 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + E ++ FK++A W + +R + LE + R+I ++ Sbjct: 91 E-----SEINEQANFKKLAQRWLEIKAASVEPNTLNRDKRLLEMYAYPFFENRSITDITV 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 D++ +K +E G LE+ RL I + A + N + + + Sbjct: 146 TDVIEILKKIEAKGSLEMMKRLYSLLNQIWQSAY--YIAPNNVIASINYRFTFKKVKEKN 203 Query: 178 ALEL---KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 L I L ID Y+G T++A++ +L +R +R A+W IDF+ + +I Sbjct: 204 YATLTKNADIKALWQSIDEYSGDIRTKYALKFAVLTALRPFNIRSAKWEYIDFDEGVISI 263 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P KMR +PLS QAL +LK+ K + +F + S + MS Sbjct: 264 PA------------GDMKMREAFTLPLSRQALELLKEYKGYNLDQIYLFGSLYGSARYMS 311 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVE---SGLWSRDAVERQMSHMARNSVRA 351 ENT+N ALR MG+ +K E+ HGFR M + E + + D +E+ ++H + +RA Sbjct: 312 ENTLNVALRRMGF-SKDEIVSHGFRAMFSTVCNENIDAHGLNFDIIEKCLAHKGTDKIRA 370 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVN 377 AY ++A++L + R M+QWWAD+LD Sbjct: 371 AY-NRAQNLAQMRAMMQWWADYLDAL 395 >UniRef50_UPI0000F2F6E4 putative integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=UPI0000F2F6E4 Length = 353 Score = 287 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 140/346 (40%), Positives = 203/346 (58%), Gaps = 7/346 (2%) Query: 49 LLANGVDPGDKKKNDKVEQSKARTFKEVAIEW---HGTNKKWSEDHAHRVLKSLEDNLFA 105 ++A GVDP ++ +++ T + V W + K SED ++ L+ E++LF Sbjct: 1 MIAEGVDPKEQLSILLAKKNNVNTLENVVRVWLDAYAVRKPLSEDTKNKQLRKFENHLFP 60 Query: 106 ALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA 165 ++ I ++ RDL + V + A R++ + YAVQ I N A+++ Sbjct: 61 KFKDKAIEQITLRDLKDALN-VIYDHSPDNAQRIRASLIQVYSYAVQHSYIQTNIARDLE 119 Query: 166 GAVASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE 224 S + HR L IP+L+ +I + +G PLT+ + L L F+RSSE+RFARW+E Sbjct: 120 DMDLSARKNHRATFRSLDLIPQLIRRIKADSGNPLTKLCLLLGLHTFLRSSEIRFARWNE 179 Query: 225 IDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI 284 IDFEA IW IPP R I GVKHS RG+KM+ HLVPLS Q++ IL+++ Q+ G D +F Sbjct: 180 IDFEAEIWRIPPRRRLIEGVKHSDRGAKMKEEHLVPLSKQSIEILEKVYQYSGDCDFVFP 239 Query: 285 GDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM 344 ++ +SENT N ALR MGY TK E+ HGFR +A S+L E ++SRDA+E+QMSH Sbjct: 240 SLNNKRIFISENTPNDALRRMGY-TKEEISFHGFRALARSALGEMSIFSRDALEKQMSHQ 298 Query: 345 ARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE-RFISPFEYAK 389 RN AY H AE+LEER ++Q W+D+L +ISP EY + Sbjct: 299 ERNETVGAYTHIAEYLEEREKIMQIWSDWLSAIENGDYISPHEYGR 344 >UniRef50_UPI0000E0F7C9 site-specific recombinase, phage integrase family protein n=2 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0F7C9 Length = 374 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 119/377 (31%), Positives = 185/377 (49%), Gaps = 37/377 (9%) Query: 1 MHLLVHPNGSKYWRLQYR-YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L V +GSK WR +Y+ + G M ALG YP+I+L AR D+ Sbjct: 25 LYLEVTKSGSKNWRYRYKNHTGSWTMKALGSYPKISLEKARALLDDL------------- 71 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 + V + K +FKE A EW S + H V + +E+ L LG IA +K +D Sbjct: 72 ---EVVAEYKCISFKETASEWLVYKGYTSYKNKHLVHRRIENYLLPKLGNMTIANIKPKD 128 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +L +K +E G LE+A R+Q + I +Y VQ+ + NPAQ + G + +H PA+ Sbjct: 129 ILPILKQIEAKGHLELARRVQNILSQIFKYGVQNLYCETNPAQPLQGCTKQPSVRHMPAI 188 Query: 180 -ELKRIPELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 E LL IDS + P + ++L +F+RS +R A+ IDF+ +W IP + Sbjct: 189 VEQSEFARLLATIDSASNLMPSVKLCLQLAPHVFLRSQSIRMAKPEHIDFDRKLWVIPKD 248 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 KM H +PL+ + +L+ + +F + P+SENT Sbjct: 249 --------------KMGREHWIPLTEPVIEMLQTAIAQTNG-EYLF-NGIKPNSPLSENT 292 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +N ALR +G D K HGFR+ + E D +E Q+ H+ N V+AAY ++ Sbjct: 293 LNHALRSLGVD-KQTHVFHGFRSSFSTLAREHCRLPGDLIELQLGHIEGNQVKAAY-DRS 350 Query: 358 EHLEERRLMLQWWADFL 374 + LEERR ++ W+ +L Sbjct: 351 QRLEERRELMDKWSKYL 367 >UniRef50_Q4FSX1 Probable phage integrase n=1 Tax=Psychrobacter arcticus 273-4 RepID=Q4FSX1_PSYA2 Length = 444 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 110/386 (28%), Positives = 171/386 (44%), Gaps = 19/386 (4%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L + N + +R ++ GK+K LG YP TL AR LLA G+DP Sbjct: 70 LNLYIRDNKTTTFRHRFTSPVTGKRKNFTLGAYPVFTLEQARDMYRNNLSLLAGGIDPVF 129 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTN--KKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 ++ ++ TF E+A EW + K E ++ A +G I +K Sbjct: 130 HHQDAHNKKRAMPTFSELADEWLQSQIASKQFEHRTIEQKRTHIAYAAAYIGRMPIDHIK 189 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR--Q 174 T D+L IK +E A R++ I A+ G ID NPA +A + + Sbjct: 190 TPDVLRAIKDIEKKTIP-TAKRVRGVCQRIFALAIGQGYIDNNPAIAVADLMLPKPKTEH 248 Query: 175 HRPALELKRIPELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 H +E +LL+ IDS T + ++L L+F R+ ++ RW IDF+A WT Sbjct: 249 HHAIIEPIAFGKLLSDIDSVTDFYGHAQNILKLQALLFQRNGDMCSMRWDAIDFDAKTWT 308 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 P++ G M + +VPL TQA+ L+ + +F K Sbjct: 309 FSPQKTGNRGD--------MVASLVVPLPTQAIEHLRALHALTSKTPYVFYNSRRKEKFE 360 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 + +N L +GY K HGFR A + +VE S E Q+ H R++ AY Sbjct: 361 HQQQLNKFLWRLGY--KDVHTPHGFRASARTLMVEQLGISETLAELQLGHNVRDANGRAY 418 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRE 379 ++ +++RR M+Q WAD+LD R Sbjct: 419 -NRVTMIDKRRDMMQRWADYLDQLRR 443 >UniRef50_C6N3S0 Putative phage integrase family protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N3S0_9GAMM Length = 397 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 109/380 (28%), Positives = 182/380 (47%), Gaps = 25/380 (6%) Query: 1 MHLLVHPNGS---KYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG 57 + L + P+ K + +++++ K + + +G Y + L AR R ++ +G+DP Sbjct: 24 LVLELRPSKKQLKKIFIFRFQWDKKPQTITIGDYRSVGLGAARDIALAYRNMVNSGIDP- 82 Query: 58 DKKKNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 + + + TF+ VA +W K W + +R KSL ++ +G++ I ++ Sbjct: 83 --RSKNVEADQEKITFEVVADQWFQKYKGTWKDFARNRHSKSLSRDIIPLIGDKPIDDIT 140 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV-ASCNRQH 175 DLL IK E G +VA RL R +I +AV S L + P + A+ + Sbjct: 141 KADLLFIIKPHEDLGHHDVAHRLYARLQSIFEFAVGSSLTENFPFIGLKKALIPKPRVIN 200 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 +PA+ E++ I + + +EL +F R +ELR A+WSE D + S W IP Sbjct: 201 QPAISSNNAHEMMRVIKQTNSTKIVKVYMELLAHLFTRPTELREAKWSEFDLQKSEWNIP 260 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH-DSHKPMS 294 ER KM H VPL+ L +LK+++ G +F KP+S Sbjct: 261 AER------------MKMGIPHWVPLTPHVLNLLKELRLITGFTPYLFSSPALKKAKPIS 308 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 E +V L G+ K HGFR++A S L E G + DA+E Q++H + VR Y+ Sbjct: 309 EASVRKLLHNAGF--KNRHTAHGFRSLASSVLHEQGNFRSDAIEAQLAHKVQG-VRGVYL 365 Query: 355 HKAEHLEERRLMLQWWADFL 374 +A+ ERR ++ W++ +L Sbjct: 366 -RADFKAERRELMHWYSSWL 384 >UniRef50_A7H3V7 Putative site-specific recombinase, phage integrase family n=2 Tax=Campylobacter jejuni RepID=A7H3V7_CAMJD Length = 399 Score = 285 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 111/388 (28%), Positives = 178/388 (45%), Gaps = 32/388 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L ++P+G K + Y+ + K + LG YP + LA+AR +RD + LA Sbjct: 25 LLLCIYPSGKKTFIFNYKCPKTLRYKRITLGEYPTLNLANARKQRDNLKVNLAE------ 78 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 ND + + TFKE+A+E K + SE + L+ F GE + +L+ Sbjct: 79 ---NDSIREKSEITFKELALEKMELKKLELSEKTYKSYVSYLQRFAFGIYGEIILDKLQI 135 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA---VASCNRQ 174 +D+L + E A + I R+ V I NP + + ++ Sbjct: 136 KDILKSFEKFRKENIREGADKFFTLLNEIFRHGVIKEYIKSNPMANLNRKELLINKASKN 195 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H LE K I L+ I Y G + A +LL RS +R A+W +ID E IW I Sbjct: 196 HATLLETKEIKALVDNIIDYKGYISVKIAAMFSLLTAQRSFSIRSAKWEDIDLENGIWYI 255 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E KM+ H +PL++Q + +LK+ K+ +F + +S Sbjct: 256 PQE------------DMKMKRAHTIPLNSQCVYMLKKYKEMSINTGYLFYSLRSKSEIIS 303 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVE---SGLWSRDAVERQMSHMARNSVRA 351 +NT+ S R MGY + HGFR M + E S D +E ++H+ +N +++ Sbjct: 304 DNTIRSMFRRMGYSND-DFTPHGFRAMFSTLAHENRNKHQMSSDIIELCLAHVEKNKIKS 362 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRE 379 AY H A +L+E+ +++QWW D+LD E Sbjct: 363 AYNH-ALNLKEKAILMQWWGDYLDEIAE 389 >UniRef50_C9M6R5 Site-specific recombinase, phage integrase family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6R5_9BACT Length = 393 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 111/388 (28%), Positives = 176/388 (45%), Gaps = 28/388 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV PNG K W ++Y + K L +G YP + LA+AR RDE + D + Sbjct: 25 LYLLVCPNGRKVWTVRYWIDKKLHQLTIGDYPMMGLAEARAERDEIK---------NDAR 75 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 KV TF E A EW+ K+ + + L L L R + E+ ++ Sbjct: 76 YEKKVAAPMGLTFGEFAREWYEKRKRPKLSKSAQALYDLRFRYLDPLMARPLTEITREEI 135 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA-L 179 + + + E R + +M YA+ + I Y+P+ ++ + + PA Sbjct: 136 VDTLHKLSEQHPAETVRRTGGIVSMVMGYALATRKIPYDPSSQLGLELPIHVSKPMPAAT 195 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 I L+ ++S + R AI+L F+RS E ARW EID + +W++P E Sbjct: 196 HASEIGVLMRALESID-SLVLRSAIQLIAYTFVRSGEACLARWDEIDLKEGLWSVPAEH- 253 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 +K + HLVPLS QA+ IL +++ +G IF + + Sbjct: 254 -----------TKTKLDHLVPLSRQAVMILDTLRRRFGGKGHIFPSRNRGKLVIPSTLSR 302 Query: 300 SALRVMGYDTKVE---VCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 +++ + HGFR A + L E W+RD +E Q+ H RN R AY ++ Sbjct: 303 EMVKLQSLPLEARPIPTVVHGFRATASTVLNEH-QWNRDVIEAQLGHFERNKSRRAY-NR 360 Query: 357 AEHLEERRLMLQWWADFLDVNRERFISP 384 AE+L R M+QW+AD+LD R+ P Sbjct: 361 AEYLPIRISMMQWYADYLDALRDGRPKP 388 >UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0X2_ACICJ Length = 410 Score = 284 bits (726), Expect = 4e-75, Method: Composition-based stats. Identities = 99/393 (25%), Positives = 185/393 (47%), Gaps = 34/393 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V +GSK W +Y G++ ++LG +++L++AR + + R L+ +G DP ++ Sbjct: 29 LYLRVRADGSKSWAFRYTMAGRKHWMSLGPLRDVSLSEAREQARQLRNLVRDGFDPLAQR 88 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNK-KWS-EDHAHRVLKSLEDNLFAALGERNIAELK 116 + + + ARTF VA + ++ +WS HA + +L +G+R ++E+ Sbjct: 89 RERQHLAAEQTARTFDAVAAAYVEAHRAEWSNPKHAQQWENTLATYASPIIGKRPVSEIS 148 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV-------- 168 D+ + + + E A+RL+ R A++ YA G + G + Sbjct: 149 LLDVRRVLDPIWAE-KPETASRLRGRVEAVLAYATVHGWRSGDNPARWPGFLDQIYAPKA 207 Query: 169 ASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 +H AL+ +P + ++ ++ +E +L RS E R ARW EIDF+ Sbjct: 208 KVRAVKHHAALDYHDMPAFMAELREREA--VSARCLEFAILTATRSGEARGARWDEIDFD 265 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD-LIFIGDH 287 A++W IP R KM+ H VPL+ +A+ +L+++ D LIF G Sbjct: 266 AAVWVIPAPR------------MKMKKEHRVPLAPRAVELLREMAGRSPRRDGLIFPGGA 313 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 KPM++ + A+ V+ + HG R+ E + R+ E ++H+ ++ Sbjct: 314 -PGKPMTDVALAKAVAVL----RPGFTAHGMRSSFRDWAAEMTSFPREIAEVALAHINKD 368 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 AAY + + L +RR +++ WA++ E Sbjct: 369 RTEAAY-QRGDLLAKRRQLMEAWANYCAGLVEE 400 >UniRef50_C8Q072 Phage integrase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q072_9GAMM Length = 402 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 117/382 (30%), Positives = 197/382 (51%), Gaps = 26/382 (6%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V +G+K W LQY + K+ M+ LG YP + LADAR +++ ++LL+ +DP Sbjct: 31 LLLNVASSGTKTWYLQYSKPFTKKKDMVNLGRYPTVNLADARKQKNYCQELLSKDIDPKT 90 Query: 59 KKKND--KVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNL---FAALGERNIA 113 + + + E FK V EW T K +A + ++ +E+ + A +G + + Sbjct: 91 HFEEEARRKEYEHRTDFKSVFEEWLPTKK-----YAPKTVEKMENYIKEMLAVIGNKPVN 145 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 ++ T D + +K VE +G L +++ + + YA+ +G NP + G + Sbjct: 146 QVTTEDCMRVLKPVESAGHLTKLEKMRSMMSQTIAYAIATGRAKENPCIHLRGVFMTPET 205 Query: 174 QHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 H PA+ + + L+ I SY G TR A+ +++F R E+R +W +IDFE + W Sbjct: 206 THAPAILDEAGLTRLVQSIYSYHGHFATRKALLFAIIMFARPGEIRHLKWQDIDFEYNNW 265 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 P + + + PL TQA+ ILK++K Y +L+F + + +P Sbjct: 266 QYTPNKTRKS----------TGVSMMSPLPTQAVEILKEMKA-YKNAELVFPSSNSTSRP 314 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 +SENT+N ALR MG++ E GFR +A + L E + +E Q+ H R+S A Sbjct: 315 LSENTLNQALRRMGFEN-TEQTSQGFRAIARTVLEEKFKYDYRWIELQLGHQVRDSNGRA 373 Query: 353 YIHKAEHLEERRLMLQWWADFL 374 Y ++ + L+ERR M+Q WAD+L Sbjct: 374 Y-NRVQWLDERREMMQKWADYL 394 >UniRef50_C6RLT7 Phage integrase n=2 Tax=Acinetobacter radioresistens RepID=C6RLT7_ACIRA Length = 405 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 121/385 (31%), Positives = 191/385 (49%), Gaps = 18/385 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V GSK+WR +YRY KML +G YPEI+L+ AR + E R +LA +DP ++ Sbjct: 25 LCLEVRTTGSKFWRYRYRYLNIPKMLTIGPYPEISLSYARDKTREYRGMLAKNLDPVTEQ 84 Query: 61 KN--DKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K D + TFK ++ E+ K S++ L+ + ++ +G + I E+ + Sbjct: 85 KKALDSAMDAIQHTFKSISNEYLEKYKDTHSQEWYENRLRYFKKDINPVIGNKPIKEVNS 144 Query: 118 RDLLAPIK------AVEMSGRLEV-AARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 D+ + G EV A ++Q +M+YA+ + I +P + + Sbjct: 145 NDIRVILDNTITRIRKSKRGTGEVKAIYVRQICAEVMQYAIITLKIINDPTIALRSYIRR 204 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 H LE K +L I+ Y G T+ A+ L +R+ E+R A+ S ++ + + Sbjct: 205 PPVNHATPLEEKDKKVILALINQYGGTTGTQNALRTALYSMLRTIEIRRAKKSFVNLKDA 264 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 TIP R +K R K TH+VPLSTQ L I+K+ Q Y +F GD D Sbjct: 265 TLTIP--RVSNAQIKDGKRNMKKNRTHVVPLSTQMLEIIKEQLQLYPDSIYLFPGD-DGI 321 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 + +NT+N AL MG + H FR A + L E +S+D +E Q++H+ + R Sbjct: 322 SMLGKNTLNEALVNMGL---GHITMHDFRATASTYLNEQ-NYSKDWIELQLAHVDGDMSR 377 Query: 351 AAYIHKAEHLEERRLMLQWWADFLD 375 A+Y H A L++RR M+Q AD +D Sbjct: 378 ASYNH-ASWLKDRRQMMQHLADTID 401 >UniRef50_B7UT12 Predicted P4-family integrase n=26 Tax=Enterobacteriaceae RepID=B7UT12_ECO27 Length = 411 Score = 283 bits (724), Expect = 8e-75, Method: Composition-based stats. Identities = 103/401 (25%), Positives = 179/401 (44%), Gaps = 47/401 (11%) Query: 1 MHLLVHPNGSKYWRLQ----YRYEG------KQKMLALGVYPEITLADARVRRDEARKLL 50 ++L + N S+ W L R ++ + LG YPE++LA+AR + E RK + Sbjct: 33 LYLRIR-NQSRAWVLCVAMGTRINNLGRTVPRRLNMGLGPYPEVSLAEARDKARELRKQI 91 Query: 51 ANGVDPGDKKKNDKVEQS----KARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLF 104 NG++P +K K Q K +TF E E ++ H + +LE + Sbjct: 92 RNGINPLQEKHEQKARQEILARKKKTFAECCEEVLEVKDSEMKNKKHLAQWRSTLETYAY 151 Query: 105 AALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM 164 +G++ ++E+ DLLA ++ + ++ + E A+RL+ R ++ YA + + Sbjct: 152 PFIGKKAVSEITKVDLLAILEPIWLT-KNETASRLRGRIETVIDYAKAKEYFEGDNPAAW 210 Query: 165 AGAVASC--------NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSE 216 G + +H AL +I + ++ +G ++ A+E +L RS E Sbjct: 211 KGMLKPLLPQPSKVQITKHHAALPYNQIGSFMKELRERSG--VSPRALEFAILTAARSGE 268 Query: 217 LRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY 276 +R A WSEID E WTIP R K H VPLS A+A+LK + +F Sbjct: 269 IRGAEWSEIDLEGKTWTIPASR------------MKAAKEHRVPLSDAAVALLKALPRFK 316 Query: 277 GAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDA 336 G +F +S+ + + L+ MGY ++ HGFR+ E+ + R+ Sbjct: 317 GIS-FVFPATRKGQ--LSDTALLAVLKRMGY---TDLTQHGFRSTFRDWAGETTNYPREV 370 Query: 337 VERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 +E ++H + AAY + +R ++ W+ F N Sbjct: 371 IEHALAHQLADKAEAAY-QRGTLWPKRVALMDEWSGFCLAN 410 >UniRef50_Q2NDX8 Site-specfic recombinase, phage integrase family protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NDX8_ERYLH Length = 396 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 107/380 (28%), Positives = 180/380 (47%), Gaps = 27/380 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L+V +G+K W L+ +++GK++ + LG E+ A+AR + EARK++ G DP K Sbjct: 35 LQLVVKASGAKSWILRVQHDGKRRDIGLGPLSEVGPAEAREKAVEARKVIRGGGDPSGLK 94 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + TF+E+A +H +K + H + L +L+ F G++ + + +R Sbjct: 95 SGSGRISGRPPTFRELATSYHDDHKSSWKNAKHREQWLSTLDTYAFPIFGDQPVDRVDSR 154 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYN-PAQEMAGAVASCN--RQH 175 D+L +K + + + E A R+ QR ++ YA G ++ P Q + A+ +H Sbjct: 155 DVLDCLKPIWNA-KPETARRVLQRVLRVLNYAHGMGHREHEAPTQSIRAALGKQRSQVRH 213 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 +L +PEL+ K+++ +G + A+ +L RS E+R A+W+E+D WT+P Sbjct: 214 HASLPYAEMPELMAKLEAASG--VGAMALRFAILTAARSGEVRGAQWNEMDLAKKTWTVP 271 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY-GAHDLIFIGDHDSHKPMS 294 ER K R H VPLS ALAIL+ K +F +S Sbjct: 272 AER------------MKARRAHAVPLSPAALAILEDAKGLRKKPEGFVFPSSR--GIALS 317 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 + T+ A+R + HG RT E A E ++H N AAY Sbjct: 318 DMTLLKAIRAA---SDQNTTVHGCRTSFRVWAAEKTSCPAAAAEAALAHTIHNKAEAAY- 373 Query: 355 HKAEHLEERRLMLQWWADFL 374 H+ ++L+ RR ++ W FL Sbjct: 374 HRTDYLDIRRQLMADWGAFL 393 >UniRef50_C8Q013 Phage integrase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q013_9GAMM Length = 455 Score = 280 bits (715), Expect = 8e-74, Method: Composition-based stats. Identities = 111/394 (28%), Positives = 181/394 (45%), Gaps = 25/394 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L+V PN +K W +Y GK + ++ G+YP ITLA A E + LL+ +DP D Sbjct: 33 LYLMVRPNETKSWLFRYTSPNTGKSQRISFGIYPSITLARAHDIWQEYQDLLSKNIDPRD 92 Query: 59 KKKNDKVE--QSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 +K K ++ RTF A E+ T K + + + + L + E I E+ Sbjct: 93 NRKAVKQALLENDDRTFGRFADEYFDTLKTILKPNTLQRKLNCLKLLKDSFAETPIDEIT 152 Query: 117 TRDLLAPI-----KAVEMSGRL-EVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 +L+ + + V+ G+ E A R + I +YA G +PA + + Sbjct: 153 PPQMLSMLIDVQNQFVKADGKPTEKAERCASIASDIFKYASARGFCSTDPASMVKSQLIK 212 Query: 171 CNRQHRPAL-ELKRIPELLTKIDSYTG--RPLTRWAIELTLLIFIRSSELRFARWSEIDF 227 HRPA+ + + +LL IDS T ++ L ++F+R+ +LR RW+++DF Sbjct: 213 PVYGHRPAIIQPDKFAKLLQDIDSLKDKVDSNTNSSLRLLPMLFVRNGDLRRMRWADLDF 272 Query: 228 EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH 287 + W P + M +VPL QA+ IL+ + G + +F Sbjct: 273 NEAKWRFQPLKGEGKEH--------MVRDMVVPLPRQAIEILQHQYKINGHSEFVFYSPS 324 Query: 288 -DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 + +S+NT N L+ +GY C HGFR A + L E + VE + H+ + Sbjct: 325 AKKNGIISDNTANKHLKELGYQN--VHCVHGFRASAKTMLQEQLKYPAVIVEMGLGHITK 382 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 + AY + E LE+R M+Q WAD+LD R Sbjct: 383 DQNGTAYG-RFEFLEDRAEMMQTWADYLDALRND 415 >UniRef50_C6RKK3 Phage integrase n=3 Tax=Acinetobacter RepID=C6RKK3_ACIRA Length = 426 Score = 280 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 95/412 (23%), Positives = 179/412 (43%), Gaps = 53/412 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGK----------QKMLALGVYPEITLADARVRRDEARKLL 50 + L V S+ W L+ + ++ + +G YPE++LA+AR + E R + Sbjct: 30 LCLNVE-GNSRVWILRAVVGKRLDKDGKLKPHRRDIGIGPYPEVSLAEARAKATELRLQI 88 Query: 51 ANGVDPGDKKKNDKVE----QSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLF 104 +G+DP K+ + + + +TF E A + +E H + +LE ++ Sbjct: 89 RSGIDPIAHKQEQLEKLYVQKLRDKTFMECAKVVIANKTRELKNEKHIGQWTSTLETYIY 148 Query: 105 AALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM 164 LG+ +I + D+ ++ + + + E A R++ R I YA G + + E Sbjct: 149 PTLGDISIGTITKVDIAEVLRPIWIK-KNETAKRIRGRIETIFDYAKAMGYFEGDNPAEW 207 Query: 165 AGAVASC------NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELR 218 G + + P+L +++ + + G ++ A+E +L RS E+ Sbjct: 208 KGNLEPIFGNIKQESRPHPSLPYEQVAGFIQHLRQKKG--ISPKALEFAILTACRSGEIF 265 Query: 219 FARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA 278 A+W EIDF+ +W IP ER K H VPLS +A+ +LK I+++ Sbjct: 266 GAKWQEIDFKNKVWIIPKER------------MKANKEHRVPLSQEAVNLLKSIQEYTQP 313 Query: 279 HDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVE-------------VCGHGFRTMACSS 325 D IF + +S+ ++ ++ M E + HGFR+ Sbjct: 314 QDFIFPAPRNGAM-LSDMSLTILIKRMHEQKLKENGLGYIDPKQNRVITTHGFRSTFRDW 372 Query: 326 LVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 + + R+ E ++H + V AAY+ + +LE+R+ ++ WA+F N Sbjct: 373 SADKTDYPREVCEHVLAHKLPDEVEAAYL-RGAYLEKRKGLMADWAEFCSAN 423 >UniRef50_Q12EX0 Phage integrase n=5 Tax=Proteobacteria RepID=Q12EX0_POLSJ Length = 410 Score = 279 bits (713), Expect = 1e-73, Method: Composition-based stats. Identities = 109/401 (27%), Positives = 190/401 (47%), Gaps = 38/401 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HL V P+G++ W L+ +K + LG YP++TLA AR AR + GV+P +++ Sbjct: 30 LHLWVKPSGNRSWILRVLVGAIRKDIGLGGYPDVTLAGARDAARRARDQILQGVNPIEQR 89 Query: 61 KNDK----VEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 + K +Q+KA+TFK+ + + + H + +LE F +G + + Sbjct: 90 RQAKALLMADQAKAKTFKDCSAAFIEDRGDEWRNPKHRQQWHNTLETYAFPFIGGLFVRD 149 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL-IDYNPAQE-------MAG 166 + +L ++ + + + E AAR++ R ++ +A G NPA+ + Sbjct: 150 ISLAHVLEVLRPIWKT-KTETAARVRGRIETVLDWAAVRGYRAGDNPARWKGHLDQVLPK 208 Query: 167 AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 +H A+ L + + + G + A+E +L RS E+R A WSE D Sbjct: 209 PSKVKKVEHHSAVGLDDLAGFIAAVRRVPG--MGARALEFAILTAARSGEVRGALWSEFD 266 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 +A+ W +PPER K H VPLS QA+ +LK I +F G D++F G Sbjct: 267 LKAAQWIVPPER------------MKAGEEHRVPLSKQAIKLLKSIPRFEG-SDVVFCGI 313 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 + +S+ T+++ +R M +V HGFR+ E + R+ E+ ++H Sbjct: 314 K--GQVLSDMTLSAVMRRM----EVNAVPHGFRSTFRDWASERTNFPRELAEKALAHTIE 367 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER-FISPFE 386 + V AAY + + L +R M+Q WADF + + + P + Sbjct: 368 SKVEAAY-RRGDLLAKRMQMMQAWADFCETPVNKGTVVPLK 407 >UniRef50_Q1QAC1 Phage integrase n=2 Tax=Psychrobacter RepID=Q1QAC1_PSYCK Length = 448 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 105/392 (26%), Positives = 182/392 (46%), Gaps = 23/392 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L+V P +K W +Y KQ ++++G+YP I+ A A E LL+ G+DP Sbjct: 32 LFLMVRPTETKSWMYRYYPPSNPKQSIISIGIYPSISYARACEVWREYEDLLSKGIDPKI 91 Query: 59 KKKNDKVE--QSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 +++ K +F A E+ T ++ + + K + + + +G I+E+ Sbjct: 92 HREDIKKSFISKTKNSFNHFAWEYFDTLEQSQKGNTLIRKKGRLELICSYIGNEPISEIG 151 Query: 117 TRDLLAPIKAVEMSG------RLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 + +L + ++ + A R + + YA G NPA + +A Sbjct: 152 SPRMLEVLLDIQAKSLNKDDKPTDKAERCAGIASDVFVYANARGFCSSNPAALIKSQLAK 211 Query: 171 CNRQHRPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 + HRPA + K + +LL I++ G P T ++ L L+F+R+ +LR W ++D EA Sbjct: 212 SSYGHRPAVTKPKDLAKLLRAIETIEGDPNTINSLRLLALLFVRNGDLRRMCWIDLDLEA 271 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH-D 288 W + P + M +VPL QA+AIL++ ++ G +F Sbjct: 272 GRWRLKPLKGQGKVN--------MVKDMVVPLPRQAVAILREQQKINGHTKYVFFSQTAK 323 Query: 289 SHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 H+ +S+ T N L+ +GY K C HGFR A + L E + VE + H ++ Sbjct: 324 KHQIISDATANKRLKDLGY--KDIHCAHGFRATAKTILQEQLKYPLVLVEMALGHTTKDP 381 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 AY + E++++R M+Q WAD+LD RE Sbjct: 382 NGTAYG-RFEYIDDRSDMMQKWADYLDALREG 412 >UniRef50_B8F737 Phage integrase family site specific recombinase n=4 Tax=Pasteurellaceae RepID=B8F737_HAEPS Length = 416 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 106/396 (26%), Positives = 183/396 (46%), Gaps = 32/396 (8%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L+V +G+K + Y Y + +G YPEI+L AR +AR LLA +DP Sbjct: 28 LRLIVRKSGAKVFVFNYYKPYTKTRTNFTIGEYPEISLIQARKEHAKARALLAQNIDPVR 87 Query: 59 KKKNDKVEQSK--ARTFKEVAIEWHGTNK---KWSEDHAHRVLKSLEDNLFAALGERNIA 113 +++ DK EQ+ TF+++A++W K +SE A + ++ G I+ Sbjct: 88 QRELDKQEQANRLELTFEKMAVKWFEDRKLKADFSERTAKDTWALFKRHILPHFGNYPIS 147 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 E+ + +K +E +G+LE + + +MRYA+ GLI N ++ Sbjct: 148 EITPLIAINALKPLERAGKLETIRKTIAKINEVMRYALHRGLIATNNLSDIGKEFDKPTP 207 Query: 174 QHRPALELKRIPELLTKI----DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 Q ++ + E L D +A+ L LL R SE+ A+W +ID + Sbjct: 208 QSMNTIQPDELAEFLQAFYQKRDKGRFGLNVFYAVMLVLLTGGRPSEIAKAKWEDIDEKE 267 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF------YGAHDLIF 283 +W V+ ++ TH+V LS Q++ +L +++ F +F Sbjct: 268 RLW--------AYQVQKGNKNLPEGRTHIVTLSRQSIELLNKMRHFNEVVNANIQSPFVF 319 Query: 284 IGDHDSHK-PMSENTVNSA-LRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQM 341 +S T+ A ++ +G D + HG R + +SL E ++ D +ER + Sbjct: 320 ASVASKKTGHLSIETMRKAIIKSIGED---RLTTHGIRHLFSTSLNEQ-NFNADWIERAL 375 Query: 342 SHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 SH RN +R +Y +KA +LE+R MLQ WAD+++ Sbjct: 376 SHKDRNRIRGSY-NKANYLEQRFDMLQHWADYVEEL 410 >UniRef50_C7I5J5 Integrase family protein n=2 Tax=Thiomonas intermedia K12 RepID=C7I5J5_THIIN Length = 401 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 106/385 (27%), Positives = 176/385 (45%), Gaps = 35/385 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V GS W +Y GK +LG +TLADA + E R + G D + Sbjct: 27 LYLRVR-GGSALWTFRYMVAGKASEQSLGPISALTLADALAKAAEVRAKIRRGEDFA-LR 84 Query: 61 KNDKVEQSKARTFKEVAIE-WHGTNKKWS-EDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + V + + TF+EVA++ W W HA + + +L F G + ++E+ T Sbjct: 85 PSATVVPTPSDTFEEVALQLWESMKPGWKNPKHADQWINTLRMYAFPRFGRKAVSEIGTE 144 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL-IDYNPAQE-------MAGAVAS 170 ++LA + + + + E A RL+QR A++ A GL NPA + Sbjct: 145 EVLAALTPIWQT-KHETATRLRQRIEAVLSAAKARGLRAGENPAAWRGHLNALLPTISKK 203 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 +H A++ + +P + ++ ++ WA++ T+L +R+ + WSEID E Sbjct: 204 RRVKHFEAMDWREVPAFMAQLRQRAN--MSAWALQFTILTALRTGTVIGTPWSEIDLERR 261 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +W IP ER K + H VPLS QA+ +L+ + + G D +F G Sbjct: 262 LWVIPAER------------MKAQVEHRVPLSRQAVELLQALPRQEG-SDWVFWGARKPT 308 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 N A+ + + + HGFR+ ES + VE ++HM N V Sbjct: 309 IS------NMAMLELLRGMRPGLTVHGFRSSFSDWAAESTHFPSQTVEMALAHMITNQVE 362 Query: 351 AAYIHKAEHLEERRLMLQWWADFLD 375 AAY + + +E+RR ++Q W D+LD Sbjct: 363 AAY-RRGDLIEKRRELMQAWGDYLD 386 >UniRef50_Q0I233 Phage integrase n=5 Tax=Pasteurellaceae RepID=Q0I233_HAES1 Length = 434 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 110/389 (28%), Positives = 188/389 (48%), Gaps = 24/389 (6%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V +GSK WR Y Y K+ +++G YPEI+L AR RDE LLA +DP Sbjct: 50 LFLSVEISGSKIWRFNYYKPYTKKRTEISIGKYPEISLLQARKIRDEYLALLAQNIDPKT 109 Query: 59 KKKNDKVEQS-KARTFKEVAIEWHGT---NKKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 + + Q+ + TFK V +W+ K +ED R + LE ++F L E ++E Sbjct: 110 HRDQKQNTQALERNTFKYVCAKWYAEIYPTKAPNEDTRARNWQRLERHIFPKLAEIPLSE 169 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 + R L+ + + G +L + A + Y ++ G+I+ + + + Sbjct: 170 ITPRLLIDVYREI---GASNTLDKLHRLVKATLDYGIKLGIIEGHNCNLAKDDFIAPLAK 226 Query: 175 HRPALELKRIPELLTKIDSY----TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 + PA+ +PELL I++ T +A LTLL +R EL W+ ID Sbjct: 227 NHPAITPAELPELLKAINTAFKEGKLEFNTLFAFNLTLLTGLRQKELTRIEWAFIDDGNK 286 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 + IP E +K + + + H++PLS+Q + ++ I+QF G+ +F + + Sbjct: 287 LLIIPSEN-----MKQTRKLREQPKDHIIPLSSQMIKLIGTIRQFNGSSPYLFPRVRNRN 341 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA--RNS 348 K + +TV++ALR GY K + HG R + S L + G +S E ++H + + Sbjct: 342 KTIGLDTVSNALRDNGYRDKQD--AHGLRVVFRSYLSQIG-FSVVVGELAIAHNSTGKGK 398 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVN 377 ++A Y + ++LEER+ Q W D+ + Sbjct: 399 IQAIY-DRYDYLEERKQAYQAWGDYCEKC 426 >UniRef50_D1Y3S1 Site-specific recombinase, phage integrase family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3S1_9BACT Length = 433 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 116/403 (28%), Positives = 191/403 (47%), Gaps = 47/403 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEG-KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L V PNG K W +YR EG +++ + LG YP + +A AR R++ R + G P D Sbjct: 26 LYLKVCPNGRKVWLYRYRDEGERERKVTLGEYPALDMAAARERKEATRARILRGEAPQD- 84 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKW--SEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + TF++VA W+ KK + + + + LE L LG R + +++ Sbjct: 85 --------TALLTFEQVARRWYEKQKKRGLAPRYLETIRQRLECYLIPPLGARPLEQIQR 136 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLI---DYNPAQEMAGAVASCNRQ 174 +L+A ++ V G +E + R+ + I +YA +G++ A ++ + + Sbjct: 137 AELVAVVEGVAKRGIVESSHRVGVILSQIYQYAEDAGILPGGGALAAASLSRVLPKTKTE 196 Query: 175 HRPALE-LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 H + + + +++ I Y G ++R +E L F+RS E R ARW EID EA +WT Sbjct: 197 HFATVSKPEDVRQVMECIRDYRGFAVSRC-LEFIALTFVRSGEARRARWREIDLEARLWT 255 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF--YGAHDLIFIGDHDSHK 291 IP E K R H VPLS QALA+L+++K G LIF+ Sbjct: 256 IPAEH------------MKRRIAHKVPLSRQALALLEEMKPLSCSGPESLIFVSGLTGRS 303 Query: 292 PMSE--------NTVNSALRV------MGYDTKVEVCGHGFRTMACSSLVESGLWSRDAV 337 S AL+ G ++ HG R+MA + L E + + Sbjct: 304 SSSGILTDMSLLRPFREALKRNPERAAAGLKPFPKMTVHGLRSMASTILNEE-RQGGELI 362 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 E Q+SH+ + +R Y + +E L++RR ++Q+WAD+LD Sbjct: 363 EIQLSHLDADRIRLIYNN-SELLDDRRALMQFWADWLDNCTRN 404 >UniRef50_B7UP04 Predicted integrase n=24 Tax=Proteobacteria RepID=B7UP04_ECO27 Length = 405 Score = 274 bits (700), Expect = 4e-72, Method: Composition-based stats. Identities = 117/390 (30%), Positives = 183/390 (46%), Gaps = 32/390 (8%) Query: 8 NGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKV 65 G W +Y K++ LG YPE+++A+A R+ LA G DP + KK + Sbjct: 35 KGRGKWVFRYVSPVTQKRRNAGLGTYPEVSIAEAARTARIMREQLAAGDDPLEIKKAE-S 93 Query: 66 EQSKARTFKEVAIEWHG-TNKKW-SEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAP 123 E+ TF + A H + W + H + L +LE+ F LG + + + D+ Sbjct: 94 EKVVIPTFADAARRVHAELSPGWENPKHVRQWLSTLENYAFPQLGAKTLDSITAADVAET 153 Query: 124 IKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR---QHRPALE 180 ++ V ++ E A+R++QR +M++ G NP + + R +H+PA+ Sbjct: 154 LRPVWLT-LSETASRVKQRIHVVMQWGWAHGFCVANPVDVVDHLLPQKTRGRDEHQPAMP 212 Query: 181 LKRIPELLTKIDSYTGRP--LTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 +++P L YT P +TR + + +L RS E R RW+EIDF IWTIP ER Sbjct: 213 WRQLP-LFVATSVYTDEPYNVTRALLLMVILTATRSGEARGMRWAEIDFHKRIWTIPAER 271 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K R H VPLS QA+ IL+ I+ +L+F +S+ + Sbjct: 272 ------------MKARIQHRVPLSRQAMHILENIRGL--HDELVFPSPRKQQI-LSDMVL 316 Query: 299 NSALRVMGYDTKVE---VCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 S LR + + HGFR+ E G +SRD ER ++H +N V AAY H Sbjct: 317 TSFLRKKKAISDIPGRVATAHGFRSTFRDWCSEQG-YSRDLAERALAHTLKNKVEAAY-H 374 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFISPF 385 + + LE+R M+Q WAD++ + F Sbjct: 375 RTDLLEQRVPMMQAWADYVMSQFAKNTKEF 404 >UniRef50_B7XGJ8 Integrase n=9 Tax=root RepID=B7XGJ8_PSEPU Length = 419 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 108/388 (27%), Positives = 172/388 (44%), Gaps = 33/388 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V K W +Y ++ LALG +P ++L DAR+ D+ R +A GVDP ++ Sbjct: 24 LILRVSATLRKSWVFRYMLAKQRHDLALGTFPALSLRDARLEADKYRLDIARGVDPAAER 83 Query: 61 KNDKVEQSK----ARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K ++ + TF+ A + T+ WS+ H + SL +++ A+G IAE+ Sbjct: 84 AKVKAAKASRTTTSHTFRASAERYIRTHSSSWSKKHHQQWQNSLTKHVYPAIGGFRIAEV 143 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS--CNR 173 T D+L + + A R++ R ++ A L G + + Sbjct: 144 DTDDILDVLTPIWSK-IPVTANRVRNRIELVLDAAKALKLRQGENPARWRGHLDKLLPKQ 202 Query: 174 QH----RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 H P+ R ELL ++DS G A+E +L R+ E+ A+W EID+E Sbjct: 203 SHTVVPFPSPTPLRTAELLARLDSLDGSA--ARAVEFAILTATRNQEVSGAQWPEIDWEE 260 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 IW IP ER K H VPL+ Q L +L+Q Q IF+ Sbjct: 261 KIWYIPAER------------MKAGKAHRVPLTEQMLEVLRQ--QVGKHDKWIFLNS-WR 305 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 P+ N + L + D V HGFR+ + E R+ E ++H + V Sbjct: 306 TGPIPGNAMARVLDQLQVDG---VVPHGFRSTFRTWAAEETDHQREVCEMALAHTLNSKV 362 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVN 377 AAY ++ + L++RR +++ W DFL N Sbjct: 363 EAAY-NRGDLLDKRRALMKDWGDFLVAN 389 >UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3P2_BURTA Length = 409 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 105/390 (26%), Positives = 183/390 (46%), Gaps = 36/390 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYE-GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 + LLV PNG KYW+ +Y G++ ++ +G YP ITL AR R+E R + G DP Sbjct: 29 LALLVKPNGLKYWQFRYMKPDGREGLIQIGPYPRITLEAARAARNEHRVAVQGGDDPATL 88 Query: 60 KKNDKVEQ----SKARTFKEVAIEWH-GTNKKW-SEDHAHRVLKSLEDNLFAALGERNIA 113 +K +K + ++A FK+ A + + +W + H + +L + +G A Sbjct: 89 RKQEKARRKIDAARALNFKQCATAFIEARSAEWVNPKHTQQWTNTLSTYAYPIIGALRPA 148 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQE-------MA 165 ++ T + ++ + ++ + E A+R++ R +++ +A GL D NPA+ +A Sbjct: 149 DIDTDLVRKVLEPIWLT-KNETASRVRGRIESVLDWAKVRGLRDGENPARWSGHLDQLLA 207 Query: 166 GAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI 225 +H AL I + ++ G A+E T+L +R+ E+ AR E Sbjct: 208 APGKVQKPKHHAALPFTEIGAFVAELRGMVG--TAARALEFTILTAMRTGEVIGARHDEF 265 Query: 226 DFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG 285 D +A +WT+P ER K + H VPLS+ AL +LK + ++F G Sbjct: 266 DADAQLWTVPAER------------MKAKRAHRVPLSSSALELLKTL-PTSADSPVVFEG 312 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 P+S + L M + + HGFR+ E +S + VE ++H Sbjct: 313 MRARR-PLSNMAMLQVLERM---KRGALTVHGFRSTFRDWAAECTPFSNEVVEMALAHAI 368 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 R+ AAY + + ++RR ++Q WAD ++ Sbjct: 369 RDKTEAAY-RRGDLFDKRRTLMQAWADHIE 397 >UniRef50_UPI0001BCF8EC putative bacteriophage integrase n=1 Tax=Mannheimia haemolytica serotype A2 str. BOVINE RepID=UPI0001BCF8EC Length = 399 Score = 273 bits (698), Expect = 7e-72, Method: Composition-based stats. Identities = 90/387 (23%), Positives = 173/387 (44%), Gaps = 25/387 (6%) Query: 2 HLLVHPN---GSKYWRLQYRYEG---KQKMLALGVYPEITLADARVRRDEARKLLANGVD 55 +L + N GS W ++ +++ + LG YP + AR E L+ G+ Sbjct: 26 NLYIKANKAAGSFSWLYKFTNPHNKAQRQKIILGRYPRTPIDFARKIAMEYNALVKQGIH 85 Query: 56 PGDKKKNDKVEQS-KARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 P + + K ++ +A TFKE+ + + S + + +E +F G+ + + Sbjct: 86 PTEHQAQQKQQKEIEAMTFKEMTSLYREF-RADSVKNVDDAISRVEMYIFPKFGDLPLNK 144 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 + + +K +E G+ ++ + I+ YA G ID+NP + + + Sbjct: 145 ISLAEWHRTLKPMEA-GKNNTLLKICSTSKQILDYAQTCGYIDFNPLTTLRASFRKKKAK 203 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H P +E KR+ E + + T+ +IE LL R +E A+W+EIDF+ +W + Sbjct: 204 HNPTIEPKRLAEFIRDLFLSDVERSTKLSIEFQLLTATRPNETAKAKWAEIDFKNRLWKL 263 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P ++ K H++ L++QALA+L+ I++F G + IF S Sbjct: 264 PADK------------MKTGKPHIITLNSQALALLENIRRFTGDREYIFSSSRSKTGHQS 311 Query: 295 ENTVNSALRVM-GYDTKVEVCGHGFRTMACSSLVESGLWSRD--AVERQMSHMARNSVRA 351 T N+A++ + G + HG R++ + L ++ ++H+ N Sbjct: 312 TQTANNAIKSIQGGKYHSVLTSHGLRSVFSTYLNGLHDPMIHNVHIDACLAHVVGNGTSR 371 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNR 378 Y H A H E++R ++Q W D+++ + Sbjct: 372 TYNHSA-HEEQKRYIMQKWGDYVEQCK 397 >UniRef50_Q1N9F3 Putative integrase prophage protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9F3_9SPHN Length = 443 Score = 273 bits (698), Expect = 7e-72, Method: Composition-based stats. Identities = 105/399 (26%), Positives = 182/399 (45%), Gaps = 29/399 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G K+WR +YR K+K L LG YPE+ L AR EARKL++ G DP +K Sbjct: 26 LFLHVTSAGGKFWRYRYRIGPKEKTLTLGRYPEMGLVAAREAHHEARKLVSEGKDPALEK 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K+ + + TF+++A EW + WS +A RV E +L+ G I ++++ Sbjct: 86 QKAKIARIEAAKITFRKLAEEWLADQEPIWSVSNAKRVRHRFERDLYPLFGNLPICQIES 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNP---AQEMAGAVASCNR- 173 +L ++ +E G +E A R++ ++ R A GL+D+ E+ A+ R Sbjct: 146 APILRALRKIEARGSIETAKRVRGYIKSVFRRAKGEGLVDHAILLEIDEIKDALKPARRG 205 Query: 174 -QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE---IDFEA 229 + E+ E +D T + A L L +R LR A WSE ID++ Sbjct: 206 SKQPALTEVPETLEFQKAVDRSTSSLTVKLASRLLALTLVRVGVLRTALWSEFEGIDWDN 265 Query: 230 -------SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLI 282 IW IP R + + H VPL QA+ +L+ ++ G L+ Sbjct: 266 PDAIPNAPIWRIPASRMKLDVEDKGNPAF----GHDVPLPHQAVEVLRALRPLTGGFALL 321 Query: 283 FIGDHDSHKPMSENTVNSALRVMGYD-TKVEVCGHGFRTMACSSLVESGLW-----SRDA 336 F +PMS+ +++ + MG K + HG+R+ + + E R Sbjct: 322 FPNSKSWREPMSDAALSTMYKRMGGGRYKNVMVPHGWRSSFSTIMNERAAELERDGDRMV 381 Query: 337 VERQMSHMARNSVRAAY-IHKAEHLEERRLMLQWWADFL 374 ++ ++H+ + + +++ + + R ++Q WAD + Sbjct: 382 IDLVLAHVPPGVSASEWSYNRSRYRKPRGTLIQIWADLI 420 >UniRef50_A1W6C2 Phage integrase family protein n=8 Tax=Burkholderiales RepID=A1W6C2_ACISJ Length = 459 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 89/390 (22%), Positives = 177/390 (45%), Gaps = 36/390 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + K W +Y + + +G + LA+AR + +AR LL +GVDP + Sbjct: 27 LYLQITKALVKSWIFRYARGTGEHFMGIGPVHTVNLAEAREQARKARLLLRDGVDPLMHR 86 Query: 61 KN----DKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 K Q+ + F++ E+ ++K+ +E H + +L + G+ ++ Sbjct: 87 AEALAKAKAVQASNKIFRDCMDEYIKSHKESWRNEKHQKQWEATLVEYACPVFGKMHVRL 146 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQE-------MAG 166 + T +L ++ + + + E A+R+++R ++ +A G + NPA+ + Sbjct: 147 INTPLVLQVLEPIWKT-KTETASRVRERIERVLAWATTQGFREGENPARWRGHLQELLPK 205 Query: 167 AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 +H P+L + + + G + A++ T+L R+ E+ FA+W+EID Sbjct: 206 PSKLKKVRHHPSLPYGHVGAFVRLLAREKG--IAARALQFTILTACRTGEVIFAKWNEID 263 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 +A +W IP ER K H VPL A+ +L++++ +F G Sbjct: 264 LDAKVWIIPKER------------MKAHKEHRVPLVRDAVTLLERLRGLDPV--WVFPG- 308 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 ++PMS + + L M + ++ HGFR+ + E L+ ++ E ++H Sbjct: 309 AKQNRPMSNMAMANVLERM---QRSDITVHGFRSTFRTWAAERTLYPKEMPEMALAHKVG 365 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDV 376 V AY + + E RR +++ WA++ V Sbjct: 366 TEVEEAY-RRTDLFERRRALMRDWAEWCSV 394 >UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE42_ECOK1 Length = 418 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 99/401 (24%), Positives = 180/401 (44%), Gaps = 27/401 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVY--PEITLADARVRRDEARKLLANGVDPGD 58 +++ V +G+ +R YR G+++ L +G Y I+LA+AR A+KLL G P Sbjct: 25 LYVAVLTSGTVSFRYDYRINGRRETLVIGQYGRDGISLAEAREELIAAKKLLKAGQSPAA 84 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K++ + A TF V + + + ++ ++ ++ LG + +AE+ T Sbjct: 85 AKRDGIKKIRGAETFA-VHTDSYMKHVILADSTRAMKQAVIDRDILPVLGNKMMAEITTS 143 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 + + G A + ++ +++ R+A G +NPA ++ + + + Sbjct: 144 MVRDLCDRIVERGGRATAVQAREIISSVYRHANDRGHGLFNPAADIKPSSIAIFKPRERT 203 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L + I +D+ + A++L L+ +R E A W EIDF+ WTIP +R Sbjct: 204 LTPEEIGLFFRTLDAIGAMGTMKMALKLVLITMVRKGEFTNATWDEIDFKKWTWTIPSDR 263 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K H++ L QA IL ++ G + + G ++ KP+S + Sbjct: 264 ------------MKGSRAHVIYLPKQAQDILVGLQMCAGGSEYLVPGRYNFRKPLSNAAL 311 Query: 299 NSALRV----MGYDTK--VEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 NS + + D + + H R A + L E+G + D +E+ ++H + VRA Sbjct: 312 NSLIDRTVKIINEDGEHIQDFTVHDMRRTASTLLHEAG-YPSDWIEKALAH-EQKGVRAV 369 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRERF---ISPFEYAKI 390 Y +KAE+ +R MLQ WAD +D + PF +K Sbjct: 370 Y-NKAEYARQRAYMLQQWADMIDSWINGEHTDLIPFSPSKF 409 >UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella RepID=A5I9N5_LEGPC Length = 407 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 96/385 (24%), Positives = 170/385 (44%), Gaps = 22/385 (5%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 + + PN K W +Y+ G LG YP ++L++A+ R E ++ GVDP + Sbjct: 29 IRITPNNVKTWIYRYKINGVTTKFTLGHYPAMSLSNAKRRFLELSQMRREGVDPKTVIQA 88 Query: 63 DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLA 122 + + + T ++A+ W+ + + + +++++ LG++ + +++T+D+ Sbjct: 89 QEEQDNN--TVDKLALNWYTNYIEKHVKRPLVIKRQIDNDIIPLLGKKKLDDVQTKDISD 146 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA-GAVASCNRQHRPALEL 181 + + G +A R + YAV G +NPA + + + L L Sbjct: 147 ALDTIVKRGARILANRTLSSIKQMFNYAVSRGYTQFNPASNIRSRDIGGIEKPKERVLTL 206 Query: 182 KRIPELLTKIDS--YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 + I L +DS TR AI+L LL +R+ ELR A W EIDFEAS+WTIP Sbjct: 207 EEIKALWLFLDSDLTQMSTQTRIAIKLLLLTGVRTVELRLASWHEIDFEASLWTIPALH- 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 SK H V LS A ++ Q+K D + G D P++EN + Sbjct: 266 -----------SKASIIHKVHLSKLAKSLFLQLKPLS-HSDYVLTGV-DGFHPITENALP 312 Query: 300 SALRVMGYD-TKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 A++ + + H R + L E+ +E+ + H + A Y ++ E Sbjct: 313 RAIKRIQEKLGIPDWTAHDLRRTFATQLGETLQIDPVVIEKCLGHK-MPRIMATY-NRNE 370 Query: 359 HLEERRLMLQWWADFLDVNRERFIS 383 L +RR L+ WA ++ + + Sbjct: 371 MLPQRREALERWAVCIENMMQDNVV 395 >UniRef50_C6UP78 Integrase n=13 Tax=Escherichia coli O157:H7 RepID=C6UP78_ECO5T Length = 301 Score = 270 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 175/236 (74%), Positives = 201/236 (85%), Gaps = 1/236 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M LLV P GSKYWR ++R+ GKQ ++A GVYP+++LADAR +R+EARKL+A G+DP + K Sbjct: 52 MSLLVKPGGSKYWRFRFRFGGKQHLMAFGVYPDVSLADARKKREEARKLVAAGIDPREHK 111 Query: 61 KNDKVEQSKAR-TFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 + K EQ+K TF++VA EW TN+KWSEDHA+RV KSLEDN+F +G RNIAEL TRD Sbjct: 112 RAVKEEQAKEIITFEKVAREWLVTNQKWSEDHANRVKKSLEDNIFPTIGTRNIAELGTRD 171 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 LL PIKAVE SGRLEVA+RLQQRTTAIMRYAVQSGLIDY+PAQEM+GAVAS NRQHRPAL Sbjct: 172 LLIPIKAVEKSGRLEVASRLQQRTTAIMRYAVQSGLIDYDPAQEMSGAVASSNRQHRPAL 231 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 ELKRIPELL KIDSYTGRPLT ELTLLIFIRSS+L FARWSEIDFE S+WTIP Sbjct: 232 ELKRIPELLDKIDSYTGRPLTHCTTELTLLIFIRSSKLHFARWSEIDFETSMWTIP 287 >UniRef50_A5PCI3 Phage integrase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCI3_9SPHN Length = 325 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 109/311 (35%), Positives = 173/311 (55%), Gaps = 16/311 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G++ WR+ YRY GKQK L G +P + LADAR + D AR++LA G DPG++ Sbjct: 26 LYLEVSPTGARSWRMNYRYLGKQKTLTFGRWPAVGLADARKKCDAAREVLARGDDPGEQA 85 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNKKWSEDH-AHRVLKSLEDNLFAALGERNIAELKT 117 K ++ + A +F+ VA E+ +K + + L + ++G+R I+ + Sbjct: 86 KLERIAASVASASSFEAVAEEYLAKIEKEGRSSVTMKKKRWLIGFIDKSIGKRPISAISA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LL ++ +E G+ E A RL+ + I RYA+ +G + + ++ GA+ HRP Sbjct: 146 PELLLTLRKMEKKGKYETARRLRSTCSQIFRYAIATGRAERDVTVDLRGALIVPKAVHRP 205 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A + ++ LL I+S+ G P T+ A++L +F+R ELR A W+E D +A++WTIP Sbjct: 206 AITDASKVGGLLRSIESFDGHPTTQIALKLVPHVFVRPGELRHAEWTEFDLDANVWTIPA 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 E+ +KMR H +PLS Q L I+ I+ +F +PMSEN Sbjct: 266 EK------------TKMRRPHAIPLSRQTLEIIASIEHDADYSRFLFPSLRSVQRPMSEN 313 Query: 297 TVNSALRVMGY 307 T+N+ALR MGY Sbjct: 314 TINAALRRMGY 324 >UniRef50_C1D7T3 Integrase n=2 Tax=Laribacter hongkongensis HLHK9 RepID=C1D7T3_LARHH Length = 416 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 115/397 (28%), Positives = 189/397 (47%), Gaps = 36/397 (9%) Query: 8 NGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKV 65 G+ W ++ K++ L LG YP IT+ A + AR L+ G+DP D K+ + Sbjct: 35 KGTGRWIFRFTSPTSKKRRDLGLGKYPAITIKQAGELGEAARLLVLQGIDPIDHKREQEA 94 Query: 66 EQSKAR---TFKEVAIEWHGT-NKKWSEDHAH-RVLKSLEDNLFAALGERNIAELKTRDL 120 A TF++ AI H T + WS HA + SL ++F +G++ +A+L RD Sbjct: 95 AAEAANERITFEQAAIHTHETLSPGWSNRHASADWINSLRRHVFPKIGDKPVADLVRRDF 154 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC------NRQ 174 A + + + E AAR++QR +M + + LI N + + Sbjct: 155 AAVLLPIWLV-LPETAARVRQRMQTVMEWCLARDLIAANQCDSALSRLLPKQPSKAEREE 213 Query: 175 HRPALELKRIPELLTKIDSYTGRPLT--RWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 H PA+ + +P + GRP++ R +E +L RS E+R W E+D A +W Sbjct: 214 HHPAMPWRLLPAFVAA-HLGEGRPVSVARPMLEFLILTAARSGEVRGMVWDEVDLSAKVW 272 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 TIP ER K TH VPLS +A+AIL+Q ++ + ++F + Sbjct: 273 TIPGER------------MKAGATHQVPLSDRAMAILRQQRERHPFSAMVFPPNRGR--V 318 Query: 293 MSENTVNSALRVMGYDTKVE---VCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 +S+ T+ L + + E HGFR+ +E G + + E+ ++HM +N V Sbjct: 319 VSDMTLTRYLHEVDAPSDTEGRHATVHGFRSTFKDWAIEHG-YPGELSEKALAHMIKNKV 377 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFE 386 AAY H++ LE+RR ++Q WAD+++ R I+ Sbjct: 378 EAAY-HRSSQLEQRRALMQAWADYVESGRAGGITNIR 413 >UniRef50_A4SXW8 Phage integrase family protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SXW8_POLSQ Length = 434 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 97/412 (23%), Positives = 175/412 (42%), Gaps = 49/412 (11%) Query: 1 MHLLVHP---NGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVD 55 +++ V N + W +Y K++ + LG +LADAR + E R+L+ +G+D Sbjct: 31 LYIQVSKGVNNFKRSWIFRYTSPTLFKRREMGLGSLEARSLADARRKTLELRQLVMDGID 90 Query: 56 PGDKKKNDKVEQ----SKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGE 109 P + + K ++ + TFKE A K S HA + ++ + +GE Sbjct: 91 PTEDRCKAKSKRITAINNGITFKEAAERCIEGRKAEWKSSKHADQWRNTISTFAYPEIGE 150 Query: 110 RNIAELKTRDLLAPIKAV-----------EMSGRLEVAARLQQRTTAIMRYAVQSGLIDY 158 + ++ T + ++ + R E A R++QR I + I Sbjct: 151 LRVDQINTSHIAKLLEQEIKNKNGTVEGTFWNVRTETATRVRQRIEVIFDWCKAHEYIKG 210 Query: 159 NPAQEMAGAV--------ASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLI 210 + + GA+ + H PAL +RI E + + + G + A+EL +L Sbjct: 211 DNPARLKGALGHLLPKAKKIQKKSHHPALPFQRIGEFVKDLREHNGY--SALALELLILT 268 Query: 211 FIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILK 270 R+SE+ A+W+E + E +W IP R K H VPL+T+A+ IL+ Sbjct: 269 ATRTSEVIEAKWTEFNLETKVWVIPAAR------------MKAGKEHRVPLNTRAMEILE 316 Query: 271 QIKQFYGAHDLIFIGD-HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVES 329 +K + +F G H +S + S +R M HGFR+ E+ Sbjct: 317 HLKTISVSS-YLFPGSLHKEESHLSNMALLSMMRKM--PKYSGYVPHGFRSTFRDWAAET 373 Query: 330 GLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 + + VE ++H +N AAY + + LE+R ++++ W ++ + Sbjct: 374 TDYPNETVELALAHTIKNKAEAAY-RRQDQLEKRTVLMEEWGAIVNAAINKN 424 >UniRef50_A1U0R6 Phage integrase family protein n=2 Tax=Gammaproteobacteria RepID=A1U0R6_MARAV Length = 432 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 95/396 (23%), Positives = 170/396 (42%), Gaps = 45/396 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + P+GS+ W L+ + ++ + LG YPEI+LA AR + E ++ + +G+DP ++K Sbjct: 40 LLLRITPSGSRQWILRAKVGNRRPDMGLGPYPEISLAQARDKAREMKEKIRSGIDPLEEK 99 Query: 61 KNDKV----EQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 + K EQ TF++ ++ K + + SL LG+ + E Sbjct: 100 RTLKRALLAEQISTLTFQKAMEKYIKMKAKEFRNPRQEKQWTNSLNTYAIPHLGKLPVRE 159 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV------ 168 + + + + + + E A R++ R I+ + G G + Sbjct: 160 IDLPHIKQVLDPIWET-KTETANRVRARIENILGWCAIHGYRSAENPARWQGYLDEVYPS 218 Query: 169 --ASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSEL--------R 218 R H AL + +PE + + TG A+E +L R++E+ Sbjct: 219 PEKIKKRGHFAALPVDDMPEFMRDLKKRTG--TAARALEFLILTASRTNEVIGDKRIGKA 276 Query: 219 FARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA 278 W EID +WT+P +R K H VPL+ A+ +LK + + Sbjct: 277 GVTWQEIDLARKVWTVPADR------------MKSEKIHRVPLTDSAIELLKGMGEGSP- 323 Query: 279 HDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVE 338 DLIF G S N + + L+ M + + HGFR+ E ++ + E Sbjct: 324 EDLIFPGPKGGIP--SNNFLTALLKRM----ERPITAHGFRSTFKDWARERTAYADEVSE 377 Query: 339 RQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 ++H+ ++ RAAY ++E +++RRLM+ W F Sbjct: 378 LALAHVNSDATRAAYA-RSELIDKRRLMMADWEQFC 412 >UniRef50_A3M8T8 Phage integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M8T8_ACIBT Length = 425 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 112/403 (27%), Positives = 177/403 (43%), Gaps = 28/403 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V P+G K W ++ K+ + G YP I+LA+AR R LLA G++P + Sbjct: 25 LYIEVRPSGKKVWIHKFSLNKKEGSITYGEYPSISLAEARYYHARDRALLAKGINPVAHR 84 Query: 61 KNDKVE--QSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 +++ TFK+ EW +K SED+ + L+ +++ +G + ++ + Sbjct: 85 NETARLALETEQETFKKYGDEWKEKHKIDKSEDYKKLIEYGLKTDIYPVIGHLHPKDVTS 144 Query: 118 RDLLAPIKAVEMSGRL-------------EVAARLQQRTTAIMRYAVQSGLIDYNPAQEM 164 + +L I R A + IMR + GL + +P + Sbjct: 145 KHVLLIINNTMERIRTSTRSQKLKPSTGETTAIVNKTFIGMIMRSCIMKGLAEVDPTYAV 204 Query: 165 AGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE 224 G + H L +K I EL +I Y G TR A+ +R+ E+R W+ Sbjct: 205 KGVIKRQKINHARPLSMKEIRELKERIPLYNGAQTTRNALNFLFYTMLRTIEVRRLEWAW 264 Query: 225 IDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI 284 +D+E T P ER + R K HL+PLS QA +ILK+ +F Sbjct: 265 VDWENKTITFP-ERTFQEII-EGKRAMKNNKIHLLPLSDQAFSILKEQYTITAKCQFVFS 322 Query: 285 GD-----HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVER 339 K + +T+N AL + + +V H R A + L E G R +E+ Sbjct: 323 SPMQLTLGKPEKMLGRSTLNFALDALKMN---DVSPHDARATASTYLNELGSDDR-WIEK 378 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFI 382 Q+SH + RA Y H A+ L RR MLQW+ADFLD E + Sbjct: 379 QLSHTDNDKTRATYNH-AKWLRNRRSMLQWYADFLDGKAEMPV 420 >UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EVM1_ECOLX Length = 396 Score = 268 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 116/383 (30%), Positives = 182/383 (47%), Gaps = 24/383 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE--ITLADARVRRDEARKLLANGVDPGD 58 +++ V P G+ +R Y G+Q+ + G Y ITLA+AR R +EA+K++A+G P Sbjct: 25 LYVAVTPAGTISFRYNYSINGRQETVTFGRYGVGGITLAEARERLNEAKKMVASGRSPAR 84 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 +K DK A TF A +W + +E + L + ++ + E+ Sbjct: 85 EKARDKARIKDAETFGAWAEKWLRGY-QMAESTRDMRRSVYQRELKSKFAQQKLTEITHE 143 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 DL A + G A ++ + R+A++ G NP+ + A + A Sbjct: 144 DLRALTDNIVERGAPATAVHAREIVLQVYRWAIERGQKVENPSDLVRPASIAKFEPRDRA 203 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L I + ++ P R A++L LL +R SEL A W EI+F ++WTIP ER Sbjct: 204 LTPVEIGLMYRYMERVGTTPSIRAAVKLLLLTMVRKSELTNATWKEINFSEALWTIPKER 263 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K R HLV LS QA+ I+ +K F G+ D I +DS PMS T+ Sbjct: 264 ------------MKRRNPHLVFLSRQAMDIMIALKTFAGSSDFILPSRYDSDAPMSSATL 311 Query: 299 NSAL----RVMGYDTK--VEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 N L R+ + + H R A + L E+G ++ D +E+ ++H + VRA Sbjct: 312 NRVLTLTYRLAQKEGDLLPKFGPHDLRRTASTLLHEAG-YNTDWIEKCLAH-EQKGVRAV 369 Query: 353 YIHKAEHLEERRLMLQWWADFLD 375 Y +KAE+ E+R MLQ WA+ +D Sbjct: 370 Y-NKAEYREQRAEMLQDWANMID 391 >UniRef50_C8PUK8 Phage integrase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PUK8_9GAMM Length = 446 Score = 268 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 101/417 (24%), Positives = 177/417 (42%), Gaps = 35/417 (8%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L + PNG +R +Y Y GK+ + LG YP +LA A+ ++ LLA +DP Sbjct: 34 LELRIRPNGKAEFRHRYTHPYTGKRPYMTLGSYPAFSLAQAKQAYNDNMALLAQTIDPLT 93 Query: 59 KKKND--KVEQSKARTFKEVAIEWHGTNKK----WSEDHAHRVLKSLEDNLFAALGERNI 112 K+ + K + TF+ VA +W + L A G+ I Sbjct: 94 HKEQENAKQAYALDNTFEAVAKDWLNEQTNNPDYVRAKQTIVNWEYQLKPLIATFGKMPI 153 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG--AVAS 170 + T +L ++ ++ + ++ R++ I +AV +GLI++NP ++AG A+ Sbjct: 154 GSITTPQVLRLLREIQKT-HIQKGNRVKAIAGRIFAHAVINGLIEHNPVLQLAGARALKP 212 Query: 171 CNRQHRPA-LELKRIPELLTKIDSYTGRPLT-RWAIELTLLIFIRSSELRFARWSEIDFE 228 HRPA + ELL +ID+ T L + ++L L F+R ++ +W++I E Sbjct: 213 TRSDHRPALITPAEFAELLKEIDNITNAKLFQKEILQLLALTFVRIGDVCAMKWADIHLE 272 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI-GDH 287 A +W P++ M +VPL+ Q +AIL+++ + G + +F G Sbjct: 273 AKMWVFEPQK--------GKNRHDMVDCLVVPLAPQTIAILERMHEITGGMEYVFYTGKR 324 Query: 288 DSHKPMSENTVNSALRV------------MGYDTKVEVCGHGFRTMACSSLVESGLWSRD 335 + +N L G HGFR A + L+E ++ Sbjct: 325 KKGQHADPQQINRILNDPSMNKAGMGKNYCGKGYLNVHSPHGFRASAKTLLMERLGYNHL 384 Query: 336 AVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYAKINN 392 E Q S + V ++ E + ER M+ WA++LD + + + N Sbjct: 385 ITEIQ-SGRSMPDVYGNTYNRMEAINERIKMMNDWANYLDQLKSGKMDNILFVDFKN 440 >UniRef50_B0SXU9 Integrase family protein n=6 Tax=Proteobacteria RepID=B0SXU9_CAUSK Length = 399 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 102/397 (25%), Positives = 169/397 (42%), Gaps = 37/397 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + G + W Y K+ L LG +++LA+ARV R +LA+G+DP Sbjct: 28 LYLSIDDGGRRRWVFIYTRGAKRTELGLGGGRDLSLANARVEAAAFRTMLADGLDP---- 83 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K ++ +A+TF A + + +E HA + +L + ER + EL T+ Sbjct: 84 KVERARDDQAQTFGACADAYVEAMRPSWRNEKHAAQWKMTLTKYAAP-IRERPVKELTTQ 142 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQE------MAGAVASC 171 D+L ++ + E A RL+ R ++ A GL NPA+ + Sbjct: 143 DILDVLQPLWTR-TPETAERLRGRMENVLDAAKAKGLRTGENPARWRGHLNQLLPKRQRL 201 Query: 172 NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 R H AL IP+ + + T + A+E +L RS E+ A W+E D + + Sbjct: 202 ARGHHAALAYDLIPDFMANLR--TRSAVAARALEFAILTASRSGEVLGATWNEFDLDKKV 259 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W IP R K H VPLS +A+ I + QF +F G Sbjct: 260 WVIPATR------------MKAGREHRVPLSARAMEIAEA--QFDDGKGYVFAGPKLGK- 304 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 P+S + LR M K ++ HGFR+ E+ +S + E ++H N A Sbjct: 305 PLSSMAMAMLLRRM----KSDITVHGFRSSFRDWASETTGFSHEVCEMALAHTIANKAEA 360 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYA 388 AY + + ++RR +++ WA + + + A Sbjct: 361 AY-RRGDLFDKRRKLMEAWAGYCATQKADQVVQLRRA 396 >UniRef50_B0VTB2 Putative prophage integrase n=1 Tax=Acinetobacter baumannii SDF RepID=B0VTB2_ACIBS Length = 388 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 92/392 (23%), Positives = 173/392 (44%), Gaps = 36/392 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V PNG K W L YR GKQ LG YP + +AR++ + K Sbjct: 25 LNISVFPNGKKKWVLSYRQNGKQNQKMLGEYPVMGCKEARLQARQL-------------K 71 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 + + + + +V EW K +W+ + ++ L I E++ + Sbjct: 72 LEYQGKVANSPPVHKVIEEWLSIMKSQWTSKKYYDTVEYRLAYLTEDFKNLPINEVERKH 131 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 + IK + G LE A+R + + +A+ S D NP + + P L Sbjct: 132 ISKKIKEIVAKGTLETASRALRLGKQVFDFAIASDYTDRNPCTLVEDVIPEYESDSHPCL 191 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWS--EIDFEASIWTIPPE 237 +PE ++ + + + A+ L R +EL ARW E+DFE +W IP + Sbjct: 192 PASEMPEFFRRMQASHSSSIVKMAMLLVCYTGTRITELLKARWDSGELDFENKVWIIPAD 251 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R +VPL Q A+ K+++ IF ++ M+ + Sbjct: 252 R------------MKRRKELMVPLVPQIYALFKELESVKIDDGYIFKKRGKPYEYMTSES 299 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR----NSVRAAY 353 V + ++ MGY+ K + HGFR++ + ES L+ + ++ Q++H+ + + Y Sbjct: 300 VLTMIKRMGYEDK--MVTHGFRSLFSTHANESKLFRGEVIDYQIAHVNKSTKADKTSKIY 357 Query: 354 IHKAEHLEERRLMLQWWADFLDVN-RERFISP 384 ++AE+ +ER ++ W+A+ ++ + +++P Sbjct: 358 -NRAEYWDERVELMTWYANEVEGWIKGAYLAP 388 >UniRef50_C8PFJ4 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFJ4_9PROT Length = 383 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 95/384 (24%), Positives = 170/384 (44%), Gaps = 38/384 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + + P+G+K++ +Y+ K K + +G E++LA+AR R+ E + + Sbjct: 31 LLIKIMPSGAKFFIYEYKQGAKYKRVTIGRAGEMSLAEARQRKSELKTRV---------- 80 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + S TF+EV EW T K S + + E L ALG IA++ +D+ Sbjct: 81 -----KTSDKITFREVFEEWIKTKSKISPKQLFWINRRFESLLLPALGSMQIADIGRKDI 135 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR--QHRPA 178 + + + + E A ++ ++A+ +D+N ++ A R +H Sbjct: 136 IGALSPLLSDEKQETAKKVLGALNGFYKFALLHEYVDHNIIADIDKATLIGRRQIRHFAY 195 Query: 179 L-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + I L+ + Y G + L +R RFA W EI + +W IP Sbjct: 196 FKDEAEIRNLIKAVKGYFGNERIKVCALFMLYTAVRGENARFATWDEI--KGDMWKIPAS 253 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYG-AHDLIFIGDHDSHKPMSEN 296 + K H V LS+ +L + + IF + +P+S+N Sbjct: 254 K------------MKNGKDHEVFLSSSVRRMLSDYRASSPLQSEFIFPSIKSNVRPISDN 301 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVE---SGLWSRDAVERQMSHMARNSVRAAY 353 TV S LR +G+ ++ + HGFR + E + D +E ++H+ +N V+ AY Sbjct: 302 TVRSMLRNLGFSNEM-ITPHGFRATFSTICHEKQDEHGQNSDVIELCLAHVEKNKVKDAY 360 Query: 354 IHKAEHLEERRLMLQWWADFLDVN 377 H A++L++R ++QWW+DFLD Sbjct: 361 NH-AKNLKQRAALMQWWSDFLDGL 383 >UniRef50_B0U0U5 Phage integrase n=1 Tax=Francisella philomiragia subsp. philomiragia ATCC 25017 RepID=B0U0U5_FRAP2 Length = 398 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 105/391 (26%), Positives = 181/391 (46%), Gaps = 33/391 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V NG+K W+L++ K+K LG YP L +AR E R+ + NG D Sbjct: 25 LYLRVDKNGNKTWQLRHTINEKRKWFGLGSYPSTNLNEARKLSAELRERIDNGEDILA-- 82 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKW--SEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K + K K++ ++ KK SED ++ ++++ +G R+I +K + Sbjct: 83 ---KPDAKKVIYVKDLVAQYIEFQKKNSSSEDFIKKLTNISKNHIIPKIGNRDIQTIKRK 139 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 D + ++ + G ++ I R A + LI+ +P ++A A+ Q P Sbjct: 140 DCIDVLEPLIDKGA--TRNKVLSALKGISRLARHNELIENDPTHDIARALPQYKAQPMPH 197 Query: 179 LEL-----KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 + LL + G ++R+A++L I +R EL +W D E S Sbjct: 198 ISPLHNKSLLKELLLDLDNYTKGNYISRYALKLLPYIVLRPIELVSLQWDFYDAENSRII 257 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG-DHDSHKP 292 IP E KMR H+V LS QA I++++K G F D+H Sbjct: 258 IPAE------------IMKMRKDHIVCLSRQAKQIIEELKDLQGGFKYFFPSYYKDNHDH 305 Query: 293 MSENTVNSALRVMGYDT--KVEVCGHGFRTMACSS---LVESGLWSRDAVERQMSHMARN 347 ++ ++ A+R MGY+ K + HGFR + ++ L E +S A+E ++H +N Sbjct: 306 INYESLAKAIRSMGYNGIDKPKQTLHGFRHIYSTAIHELQEQYHFSELAIELVLAHTDKN 365 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLDVNR 378 RA+Y + A+ L ER ++Q +AD++D + Sbjct: 366 KSRASY-NFADKLSERAKIMQVYADWIDNLK 395 >UniRef50_B5J8B6 Site-specific recombinase, phage integrase family protein n=2 Tax=Rhodobacteraceae RepID=B5J8B6_9RHOB Length = 436 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 96/397 (24%), Positives = 173/397 (43%), Gaps = 43/397 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKM--------LALGVYPEITLADARVRRDEARKLLAN 52 ++L+V P+G++ W ++ +G++ LG +T+ AR R E R++ Sbjct: 65 LYLVVDPSGARRWIVRVVVKGQKNKKGAPLRTDFGLGGADIVTINQARDRALEYRRMAKQ 124 Query: 53 GVDPGDKKKNDKVEQSKARTFKEVAIEWH-GTNKKWS-EDHAHRVLKSLEDNLFAALGER 110 G++P + D TF+E A + H W H + + +L D F +G Sbjct: 125 GLNPRFNAQRD------IPTFEEFAQQVHIERMPTWKNAKHGQQWINTLRDYAFPKIGRM 178 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLI-DYNPAQEMAGA-- 167 + + +++ + + + + E A RL QR ++ A G NP + A Sbjct: 179 PVDSIDQPEVMMCLSPIW-TEKHETARRLAQRIKTVLDVARSKGFRSGENPVTAIKDAQA 237 Query: 168 --VASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI 225 +H A+ + +P T + + ++ A+ T L R+SE+ RW EI Sbjct: 238 LPKVKTKPKHHKAMHWRDVPAFYTDLKTRNA--MSANALRFTCLTGSRTSEVLGMRWEEI 295 Query: 226 DFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG 285 DF+A +WT P ER K H VPL+ + L+I++ +K D +F G Sbjct: 296 DFDARLWTCPIER------------MKTGEVHRVPLTDEMLSIIEPLKAL--KSDYVFEG 341 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 HKP+S ++ LR M + V HGFR+ E R+ E +SH Sbjct: 342 Q-KRHKPLSNMSMLMLLRRMDVEG---VTVHGFRSTFRDWASEVASAPREIAEMSLSHRV 397 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFI 382 + V AY +++ +E+RR +++ W+ ++ + + Sbjct: 398 GSDVERAYA-RSDLIEKRRALMKRWSMYVAGESGQIV 433 >UniRef50_C8UI65 Putative integrase n=1 Tax=Escherichia coli O111:H- str. 11128 RepID=C8UI65_ECO1A Length = 352 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 105/262 (40%), Positives = 161/262 (61%), Gaps = 15/262 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV PNG KYWRL+YR GK+K+LALGVYPE+TLADAR +R++A++ +A G+DP + K Sbjct: 26 LYLLVKPNGGKYWRLKYRVAGKEKLLALGVYPEVTLADARAKREDAKRGIAGGIDPMEAK 85 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +K+ + TFK++A+EWH + KKWS +A +L++ ++F +G++ IAE+K Sbjct: 86 REEKIARETQLNNTFKDIALEWHSSKLKKWSAGYASDILEAFNKDVFPYIGKKPIAEIKP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LL ++ +E G E A +++QR + RYA+ +G +YNPA ++ A+ H P Sbjct: 146 LELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIVTGRAEYNPAPDLTSAMQGHESNHYP 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L K +P+ + SY+G L A L ++ +R+ ELR A W EIDF +IW IP Sbjct: 206 FLTAKELPDFFKALSSYSGSALVVMAARLLIITGLRTGELRGALWDEIDFNKAIWEIPAS 265 Query: 238 REPIPGVKHSHRGSKMRTTHLV 259 R KMR H+V Sbjct: 266 R------------MKMRRPHIV 275 >UniRef50_B3R9I1 Prophage INTEGRASE PROTEIN n=1 Tax=Cupriavidus taiwanensis RepID=B3R9I1_CUPTR Length = 412 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 88/394 (22%), Positives = 158/394 (40%), Gaps = 25/394 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLA-NGVDPGDK 59 ++L + P+G+K + L+Y G +K+ LG +P++ +A AR + E R+LL + P Sbjct: 27 LYLRLEPSGTKTFCLRYTVAGSRKLKVLGTFPDMDIAAARKQASEMRELLEVHDSLPSAS 86 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K+ D + T ++A EW + + L L+ ++ +G+ + + R Sbjct: 87 KEVD--ALTSPITVAQLATEWEMRYCRQRYKRPDKELHYLKSDIVPVIGQELVQNVTGRH 144 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 + I + G A R ++ YAV+ G ID P + L Sbjct: 145 VSLVIGKIVDRGARTKANRTLCVLKSLFGYAVEHGYIDATPVAMTKKGAGGAEKARSRVL 204 Query: 180 ELKRIPELLTKIDSYTGRP--LTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 K I L +DS R T+ ++L LL R E RW ++D IW +P E Sbjct: 205 NPKEIETLWHALDSRRRRMNWRTKALLKLILLTAQRPGECCGMRWEDVDLANGIWFLPAE 264 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG-DHDSHKPMSEN 296 +K H+V LS A++ILK ++ G +F + + Sbjct: 265 ------------LTKSDRDHVVHLSHMAVSILKMAEKETGGSVYVFNSVVKGRDVATTVD 312 Query: 297 TVNSALRVM----GYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 + A+ M + H R A + + +G++ E+ ++H + V A Sbjct: 313 ALTRAVARMLANGEFGAMKRFTPHDLRRTASTGMANAGVYP-HITEKILNHRMKG-VLAV 370 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRERFISPFE 386 Y H E+L ER+ ++ W ++ + Sbjct: 371 YNH-GEYLPERKAAMELWGRLIEGWVGNLVGQVS 403 >UniRef50_A7ZG37 Symbiosis island integrase n=3 Tax=Campylobacter RepID=A7ZG37_CAMC1 Length = 406 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 109/394 (27%), Positives = 192/394 (48%), Gaps = 38/394 (9%) Query: 1 MHLLVHPNG---SKYWRLQYRYEGKQKM---LALGVYPEITLADARVRRDEARKLLANGV 54 +++L + +K + +Y+ +++ + +G YP ITLA+AR + E +L G Sbjct: 31 LYVLAYKTQKETTKTFYFKYQESNQKRTTKQIKIGKYPSITLAEARAKALELERLRDRGE 90 Query: 55 DPGDKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 D K TFK+VA EW + ++ + +E NL LG++ I E Sbjct: 91 DLQTATAKQKT-----ITFKDVADEWIDKEQSKELIAFNKQIGRIEKNLIPYLGDKAITE 145 Query: 115 LKTRDLLAPIKAVEMSGR-----LEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM--AGA 167 LK RD I+ ++ E + R + I+ AV G I++NP +++ A Sbjct: 146 LKRRDYAHAIEQIQAREAKRGITHETSLRTFRLLRKILDLAVNKGYIEHNPTRDIIFNDA 205 Query: 168 VASCNRQHRPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 + H A E K++ ELL + Y G T+ A+ + F+RS+ +R +W +D Sbjct: 206 FKTSTNNHFKAITEPKKLKELLGAMQDYQGSFYTQQALIFGVHTFLRSANVRGLKWQYVD 265 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 FE ++ T P E K+R +P+S Q +LK + + + D +F Sbjct: 266 FENNLITFPAE------------AMKLREVFYMPMSKQVKKLLKTMLE-HKRGDFVFPSG 312 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVE---SGLWSRDAVERQMSH 343 + +P+S++T+N A++ +G+ E+ HG RT A + L E + +S D +E + H Sbjct: 313 ISATRPLSDSTLNQAIKRLGFGD--EMVFHGLRTTASTLLNENIKNHGFSSDVIELCLDH 370 Query: 344 MARNSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 R+SV+A Y +++ L+ER ++QWW+D+LD Sbjct: 371 KERSSVKAIY-DRSQRLDERAKLMQWWSDYLDSL 403 >UniRef50_A9HQA6 Phage-related integrase n=5 Tax=Rhodobacteraceae RepID=A9HQA6_9RHOB Length = 398 Score = 265 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 89/389 (22%), Positives = 168/389 (43%), Gaps = 43/389 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKM--------LALGVYPEITLADARVRRDEARKLLAN 52 ++L+V P+G++ W ++ +G++ LG +T+ AR R E R++ Sbjct: 26 LYLVVDPSGARRWIVRVVVKGQKNKKGAPLRTDFGLGGADIVTINQARERALEYRRMAKT 85 Query: 53 GVDPGDKKKNDKVEQSKARTFKEVAIEWHGTNKKWSE--DHAHRVLKSLEDNLFAALGER 110 G++P K + TF+E A + H + H + + +L D F +G Sbjct: 86 GLNPRFNAKRE------IPTFEEFAKQVHIDRLPTWKNAKHGQQWINTLRDYAFPKIGRM 139 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQEMAGA-- 167 I + +++ + + + + E A RL QR ++ A G D NP + A Sbjct: 140 PIDSVNQPEVMMCLAPIW-TAKHETAKRLAQRIKTVLDVARSKGFRDGENPVTAIKEAHA 198 Query: 168 --VASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI 225 H A+ + +P + + ++ A+ T L R+ E+ +W EI Sbjct: 199 LPKVKGKVNHHKAMHWRDVPAFYSDLRGRNA--MSAKALMFTCLTGSRTGEVLGTQWGEI 256 Query: 226 DFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG 285 D +A +WT P R K H VPL+ + L+I++ ++ D +F G Sbjct: 257 DLDARVWTCPAIR------------MKTGEDHRVPLTDEMLSIIEPLRAMQ--SDYVFEG 302 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 H+P+S ++ LR M + V HGFR+ + R+ E +SH+ Sbjct: 303 Q-KRHRPLSNMSMLMLLRRMQVEG---VTVHGFRSTFRDWASDVANAPREVSEMSLSHLV 358 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFL 374 + V AY +++ L+ RR +++ W++++ Sbjct: 359 GSDVERAYA-RSDLLDRRRALMERWSNYV 386 >UniRef50_D2M358 Integrase family protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M358_RHOPA Length = 456 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 122/421 (28%), Positives = 193/421 (45%), Gaps = 50/421 (11%) Query: 1 MHLLVHPN-------GSKYWRLQYRYEGKQKMLALGVYP-----EITLADARVRRDEARK 48 ++L V P+ SK WR+ YR+ G+QK ++G Y +LADAR RD+A+ Sbjct: 46 LYLFVTPDVSRPGNAASKLWRMDYRFHGRQKTYSIGPYGNGRDGTFSLADARRERDKAKD 105 Query: 49 LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWHGTNK----------KWSEDHAHRVLKS 98 LL G DP +K+ DK +Q+ AR F + A EW K + VL+ Sbjct: 106 LLKEGKDPSIEKQLDKHKQAAARPFAQWADEWLAKKKVEKVKRGRIVAVRDPKTVEVLEL 165 Query: 99 LEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY 158 + A G+ ++K D+LA +++ E GRLE R++ I YA G Y Sbjct: 166 RVGYVKARFGKLCRQDIKRPDVLAFMRSYEAEGRLETRDRVRSIGEQICDYADVEG-DGY 224 Query: 159 NPAQEMAGAVASCNRQHRP-ALELKRIPELLTKIDSYTGR----PLTRWAIELTLLIFIR 213 NP + + G + + RP E + + + I + R + A+ L R Sbjct: 225 NPFRNLNGQMIANISTPRPGVTEPRDVTRVFKLISAPWTRARFGDVVGLALRFNALTIPR 284 Query: 214 SSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIK 273 + W E+D++A WT+P + K H+VPLS QALAIL+ ++ Sbjct: 285 PGMVNEMEWGEVDWDAKRWTVPAPK------------MKTGWDHVVPLSRQALAILRSVQ 332 Query: 274 QFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSS-----LVE 328 + G F D P+S NT+N LR++G DTK + C HGFRT + + + Sbjct: 333 KLTGHRRYAFSCSKD--APLSNNTLNKRLRLLGIDTKTDHCAHGFRTTFSTLSHHEEIKD 390 Query: 329 SGLWSRDAVERQMSHMARNSVRAAYIHKA--EHLEERRLMLQWWADFLDVNRE-RFISPF 385 + W D VE Q++H+ ++V Y + R ++Q WAD +D + + + P Sbjct: 391 AKAWDGDVVELQLAHLDNSTVEGLYKKHGPLALIGSRTKLMQHWADRIDHWLDPKKVMPI 450 Query: 386 E 386 + Sbjct: 451 K 451 >UniRef50_C7JAN4 Phage integrase n=17 Tax=Acetobacteraceae RepID=C7JAN4_ACEP3 Length = 404 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 107/385 (27%), Positives = 181/385 (47%), Gaps = 35/385 (9%) Query: 4 LVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKK 61 LV +K W ++ ++ + LG +++LA+ R + EAR L+A G+DP D+++ Sbjct: 30 LVAQGAAKSWFFRFTSPISNTRREMGLGSVHDLSLAEVRRKATEARHLVAAGLDPIDERR 89 Query: 62 NDKVEQSKAR--TFKEVAIEW-HGTNKKWSEDHAHRVL-KSLEDNLFAALGERNIAELKT 117 K ++ K TF ++A + W + V SLE ++F A+G + ++E++T Sbjct: 90 KLKAQRKKESGLTFSDIAKRYVKEMAPGWRNARSSTVWTSSLERHVFPAMGGKLVSEIET 149 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQE-------MAGAVA 169 D+LA ++ + + E A R++ R I+ +A G D NPA+ + A Sbjct: 150 EDVLAVLRPIWKT-TTETADRVRGRIERILDFARTHGWRDGENPARWRGHLANILPKPSA 208 Query: 170 SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 +H PA+ K I +++ K+ G ++ A+ L RS E+R A WSEID Sbjct: 209 VAKARHLPAVNRKDIGKVMAKLAQAEG--ISPKAVRFACLTAARSGEVRQAVWSEIDLVT 266 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYG--AHDLIFIGDH 287 IWTIP + K H VPLS A+A+L+++ F A DL+F G Sbjct: 267 KIWTIPAHK------------MKAGKEHRVPLSAGAIAVLQEVLPFRDKRAGDLVFPGG- 313 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 +P+S+ ++ AL +V HG R+ E + + E ++H + Sbjct: 314 KRGRPLSDVVLSKALHSAA--GTKDVTVHGLRSTFRDWAAEETDYPGEVAEMALAHTISD 371 Query: 348 SVRAAYIHKAEHLEERRLMLQWWAD 372 V AAY + + +RR M+ W D Sbjct: 372 KVEAAY-RRGDLFNKRREMMTAWND 395 >UniRef50_B5J7B6 Site-specific recombinase, phage integrase family protein n=3 Tax=Proteobacteria RepID=B5J7B6_9RHOB Length = 446 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 95/405 (23%), Positives = 170/405 (41%), Gaps = 47/405 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P+GS+ W + G+++ + LG P +TLA AR + + + G DP + Sbjct: 50 LMLRVEPSGSRRWVQRIVISGRRREIGLGTPPVVTLAAAREAALDNMRTVQAGNDPVAIR 109 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 +N + + A +++ S+ H + +L+ LG + ++ T D+ Sbjct: 110 RNARTFLTFAT--AAEHAIAAKSSEFRSDKHRKQWRSTLDTYALPILGALPVGKVNTADV 167 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS--------CN 172 L ++ + + + E A+RL+ R AI+ +A +G + A G ++ Sbjct: 168 LRVLEPIW-TEKTETASRLRGRIEAILSWATAAGHREGENAARWKGNLSEMLPKPQRVAK 226 Query: 173 RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 H PAL + + G + A+E L RS E+R W+E+D +W Sbjct: 227 TVHHPALASSDVSVWYAALRGRDG--VAARALEFLALTAARSGEVRGMTWAEVDLTTGVW 284 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD-----LIFIGDH 287 T+P +R K H VPLS A ++L+ + A +F Sbjct: 285 TVPADR------------MKASREHRVPLSAPAFSLLESMAVAPDADPTDCGRPVFSAPR 332 Query: 288 DSHKPMSENTVNSALRVM----------GYDTKV---EVCGHGFRTMACSSLVESGLWSR 334 +S+ ++++ +R M G+ + HG R+ E G + R Sbjct: 333 GG--VLSDMSLSAVMRRMQQAEIDVGCAGWLDRASGRPAVPHGLRSTFRDWTAECG-YPR 389 Query: 335 DAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 D E ++H ++V AY +++ LE RR M+ W+DFLD E Sbjct: 390 DMAEMALAHDVGSAVERAY-RRSDMLERRRAMMAAWSDFLDGRVE 433 >UniRef50_A6VNS1 Phage integrase family protein n=7 Tax=Pasteurellaceae RepID=A6VNS1_ACTSZ Length = 427 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 107/395 (27%), Positives = 182/395 (46%), Gaps = 27/395 (6%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP-- 56 + L + PNG+K W Y Y K+ +G YP ++LADAR + E R+LLA +DP Sbjct: 31 LRLAIKPNGTKTWLFNYTKPYIKKRTDKTIGQYPSVSLADARAKAHEFRELLAKNIDPHQ 90 Query: 57 GDKKKNDKVEQSKARTFKEVAIEWHGTNKK-------WSEDHAHRVLKSLEDNLFAALGE 109 + +K + + TF VA EW +K +SE ++ + ++ LG+ Sbjct: 91 NEIEKEKQERLPMSNTFSHVANEWLVYREKIGMERKDYSEKTKTDTIRRV-NDAIEILGD 149 Query: 110 RNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA 169 + ELK + LA + A G+ + +I YA + G D N + + + Sbjct: 150 TSFKELKLQHGLALLDAHRTRGQYTEMKKRLFVLKSIAEYAERFGYWDRNEWRYLGEDLP 209 Query: 170 SCNR-QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 S ++ +H A+ K +PE L ++ + AI LL R+SE A++S+I Sbjct: 210 SPDKNKHFAAIHYKELPEFLFELRKANIHYSSLLAILWGLLNVTRASETVGAKFSDISEN 269 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD 288 ++ P E + ++G K HL+PLS QA +L I++ D +F + Sbjct: 270 ENL---PGE---LVLTVQVNKGGKGARDHLIPLSRQAGKLLTFIRK-NSTSDYLFPAAYK 322 Query: 289 SHK--PMSENTVNSALRVMGYDT-KVEVCGHGFRTMACSSLVE---SGLWSRDAVERQMS 342 + ++ T N ++ MG K + HG RT+ S + + +E +S Sbjct: 323 RGRLVHINPQTPNDVIKSMGAGKYKGIMTNHGMRTLFSSYCNDNRLELGLDPEIIEICLS 382 Query: 343 HMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 H+ + VR AY ++AE+L R LQ WAD++++ Sbjct: 383 HLNGDKVRNAY-NRAEYLPYRLKTLQAWADYVELC 416 >UniRef50_C7JFF4 Phage integrase n=8 Tax=Acetobacter pasteurianus RepID=C7JFF4_ACEP3 Length = 434 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 106/384 (27%), Positives = 183/384 (47%), Gaps = 35/384 (9%) Query: 4 LVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKK 61 LV GS+ W +++ GK++ ++LG ++LADAR + + R + N +DP +++ Sbjct: 65 LVVTGGSRLWEFRFKSPVTGKRRQMSLGSAYSLSLADAREKAAKCRGMTENRLDPIIERE 124 Query: 62 NDK--VEQSKARTFKEVAIEWHGTNKKWSEDHAHR--VLKSLEDNLFAALGERNIAELKT 117 +K E K TF EVA ++ +DH SL ++F GE+++ ++ T Sbjct: 125 KEKAARELEKGLTFAEVAAQYIKAQTPAWKDHRSPAVWTSSLTQHVFPIFGEKSVRDVDT 184 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQE-------MAGAVA 169 +D+L ++ + + + E + R++ R I+ YA + NPA+ + Sbjct: 185 QDVLTALRPIW-TEKTETSGRIRGRIERILDYARVQQWREGENPARWRGHLSVMLPAPSK 243 Query: 170 SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 QH A E K I E++ + S G + A+ L RS E+R A WSEID Sbjct: 244 ITKVQHHKAAEWKDISEIMKALQSING--MAAKAVRFCCLTAARSGEVRNAVWSEIDLSE 301 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA--HDLIFIGDH 287 ++W +P E+ K H VPLS A+ +L+++ A DL+F G Sbjct: 302 ALWVVPAEK------------MKAGREHRVPLSGDAVKVLQEVLPHRDAVSGDLLFPG-A 348 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 +P+S+ V+ AL EV HG R+ E+ + SR+ E ++H ++ Sbjct: 349 KRGRPLSDVAVSKALHHAA--GTKEVTVHGLRSTFRDWAGETKVCSREVAEAALAHAGKS 406 Query: 348 SVRAAYIHKAEHLEERRLMLQWWA 371 V AAY +++ L+ RR +++ WA Sbjct: 407 KVEAAYF-RSDLLDLRRPLMEEWA 429 >UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NM52_9DELT Length = 406 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 89/379 (23%), Positives = 165/379 (43%), Gaps = 25/379 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV P+G + W L+Y++EGK + + LG YP+++L AR + R ++ G+DP K+ Sbjct: 26 LVLLVLPSGRRSWLLRYQFEGKPRRITLGEYPDMSLLQARNASEATRSIIKQGLDPALKR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 +K + T ++ E+ K S R + +E ++ G+R +AE+ RD Sbjct: 86 TEEKTAHKTSPTVSDLLTEYWDMELKESPSGKER-RRLVEKDVLPPWGKRKVAEITRRDA 144 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + V RLQ + +A + G+++++P + + E Sbjct: 145 ALLLDTVRAR-APVTGNRLQGVLVRMFNFAAERGVLEHSPLMGLRKKKEQPRSRVLADKE 203 Query: 181 LKRIPELLTKID--SYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 +K + + L +D + +++ A+++ LL R E+ W EID W IP ER Sbjct: 204 IKLLWDAL-ALDNTAMDIYRVSKLALKMILLTGQRPGEVCGMTWDEID--GDTWNIPAER 260 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYG-AHDLIFIGDHDSHKPMSENT 297 K + H VPL + AL I++Q +++ +F H P++ ++ Sbjct: 261 ------------MKSKEPHNVPLGSMALEIIEQARRYSPRGSTFVFKSSHFKEGPITPHS 308 Query: 298 VNSALRV--MGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 ++ A+ H R + L E G+ ER + H + + A Y + Sbjct: 309 LSKAILRHWQEMGVTERFTPHDLRRTLRTRLAEIGV-DDVVGERVLGHKLQG-IMAVY-N 365 Query: 356 KAEHLEERRLMLQWWADFL 374 + + +E+R L W L Sbjct: 366 RHSYDKEKRQALALWERKL 384 >UniRef50_A3JW30 Site-specfic recombinase, phage integrase family protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JW30_9RHOB Length = 389 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 101/388 (26%), Positives = 178/388 (45%), Gaps = 34/388 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V +G YW + G ++ + LG P TLA+AR E +++ G DP +K Sbjct: 26 LQLYVKKSGRSYWVQRLTVNGIRRDIGLGSPPITTLAEAREVAFENKRIARAGGDPLAQK 85 Query: 61 KNDK----VEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 + EQ+ + E+ W G + A + ++E +F +G ++ ++ Sbjct: 86 RQKAVIPSFEQAARQVVVELGPTWRGAKE------AASFISTMECYVFPRIGGSRVSNVQ 139 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 + D+ I V + VAARLQ R +A+ ++++ NPA A A+ + + Sbjct: 140 SSDVRNIIMDVRKT-APTVAARLQTRISAVFKFSIAKNWRTDNPATSSALALPKPTHKPK 198 Query: 177 PALELK--RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 P + L ++ + +++ T+ AIE T+L RS E+R A W EID +W Sbjct: 199 PRVSLPYLQVSGCIHAVNNSHAWVGTKLAIEFTILTASRSGEVRKAEWCEID--GDLWNR 256 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E K H VPLS +ALAIL++ ++ LIF +S Sbjct: 257 PSEH------------MKEEIAHSVPLSERALAILEKAQEINNESGLIFPAPRGG--MLS 302 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 + T++ ++ +G+ V HGFRT + E ++ + E ++H AY Sbjct: 303 DMTMSKLIKELGFAADV----HGFRTSFRTWSQEQTNFAWEVGEVALAHSVGGKSERAYA 358 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFI 382 ++++LE+RRLM+ W+ +L + R + Sbjct: 359 -RSDYLEKRRLMMAAWSSYLTLPRGEVV 385 >UniRef50_B0T5C0 Integrase family protein n=31 Tax=Proteobacteria RepID=B0T5C0_CAUSK Length = 436 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 97/403 (24%), Positives = 176/403 (43%), Gaps = 51/403 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V G K W +Y +G+ + + LG I+L++AR +AR+L +G+DP +++ Sbjct: 28 LYLMVQKGGGKSWVYRYMLQGRAREMGLGPAHTISLSEARAMARDARRLKFDGIDPIEQR 87 Query: 61 KNDKV----EQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 + + E +K TFK+ + + NK +E HA + +L G R +++ Sbjct: 88 QLARTRTTLEAAKGFTFKQASSAYIRANKAGWRNEKHAQQWESTLTTYADPIFGSRGVSD 147 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS---- 170 + T +LA ++ + + + E A+R++ R A++ +A GL + G + Sbjct: 148 IDTGMILAVLEPIWST-KPETASRVRGRVEAVLDWATARGLREGENPARWKGHLEKLLPA 206 Query: 171 ----CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 +H AL + + + G A+E T+L R+ E+ A WSEID Sbjct: 207 KSRVHKVEHHAALPYAELSAFMAALKDQPG--AGARALEFTILTAARTGEVIGAEWSEID 264 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAH-DLIFIG 285 +W IP +R K R H VPL+ + IL+ K Y A + Sbjct: 265 LAGQVWIIPADR------------MKGRKEHRVPLTAPLIEILEGRKADYAAVIRRVLES 312 Query: 286 DHDS-----------------HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVE 328 K +S + + L+ M + ++ HGFR+ E Sbjct: 313 KRQPIPDDIPPVGPLFWGTLFGKKLSNMAMLAVLKRM---KREDLTAHGFRSTFRDWAAE 369 Query: 329 SGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWA 371 + + + VE ++H N V AAY + + E+R+L+++ WA Sbjct: 370 TTEYRSEIVEMALAHTIGNKVEAAY-RRGDLFEKRKLLMEDWA 411 >UniRef50_D1D4Y4 Site-specific recombinase n=19 Tax=Neisseria RepID=D1D4Y4_NEIGO Length = 406 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 101/384 (26%), Positives = 184/384 (47%), Gaps = 38/384 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V+P G + W+L + +G+Q+ ++LG YP+ +LA+AR R+E R+ A+G + +KK Sbjct: 39 LALWVYPTGRRSWKLSFMQDGRQQTISLGRYPDFSLAEAREWREEVRRKRAHGENVVNKK 98 Query: 61 KNDKVEQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 F++VA +W +K SE +A +V+++ E +F A+G +I +++T D Sbjct: 99 VRADFA------FEKVARDWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTAD 152 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM-AGAVASCNRQHRPA 178 ++ ++ +E G ++ + + + +AV SG++D NP ++ +G ++ A Sbjct: 153 VVGCLRVMEARGIVDTLRKTKNSLKMVFAFAVGSGMMDINPVAQIGSGVFERVKTKNMTA 212 Query: 179 LELKRIPELLTKIDSYT----------GRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 L +P L+ ++ P+TR+ I LL R E WSE+D Sbjct: 213 LSPSELPRLIDFLEQRNEFAVYAGRVHIHPVTRFCIYWLLLTMTRIREAALMEWSELD-- 270 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD 288 +W IP ER+ K R H VPLS +L Q + +F + Sbjct: 271 GEVWRIPAERK------------KERRGHDVPLSRAMRWVLDQARGLNVNGRFVFESVNF 318 Query: 289 SHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 +++ + + A+R G DT HG R++A + L E D E+ ++H Sbjct: 319 QG-HINKESPHVAMRRSGLDT----TAHGLRSLARTYLREVLKVYNDVAEKLLAHSLGTR 373 Query: 349 VRAAYIHKAEHLEERRLMLQWWAD 372 + AY +++E EER+ + W + Sbjct: 374 TQTAY-NRSELWEERKDAPERWGN 396 >UniRef50_Q3J2T0 Putative P4-family integrase n=5 Tax=Rhodobacteraceae RepID=Q3J2T0_RHOS4 Length = 439 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 109/424 (25%), Positives = 190/424 (44%), Gaps = 55/424 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + P G+K W L+ G ++ + LG YPE+ LA+AR R EA++ +A GVDP +++ Sbjct: 35 LLLQITPTGAKSWLLRTTVAGTRRAMGLGSYPEVGLAEARERAREAKRKIAAGVDPIEER 94 Query: 61 KNDKVEQSKAR----TFKEVAIEWHGTNKKWSEDHAHRVLK-SLEDNLFAALGERNIAEL 115 K + + A+ TF + A +W + + + ++ +L F +G + EL Sbjct: 95 KATRAALAAAQRRSLTFADAADKWIKAKLSDRPEKSQKAVRATLTAYSFPEIGALTVQEL 154 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA------ 169 +D++ + + + + + A +++ AI+ +A SG + AG + Sbjct: 155 TPQDVVRALNTIW-TAKPDTATKMRGYLEAILSWATVSGYRTGDNPARWAGNLKELLPAP 213 Query: 170 ----SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI 225 + PA+ + R+ + ++ G T A+ L RS E+R A WSE+ Sbjct: 214 SVVAKGRAGNFPAVPVARLADWWEELGQREGMGAT--ALRFAALTAARSGEVRGALWSEV 271 Query: 226 DFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG 285 D +A++W +P R KM H VPLS A+A+L+ + + G DLIF G Sbjct: 272 DLDAALWVVPGAR------------MKMGREHRVPLSGPAVALLRGLPRLAGTGDLIFPG 319 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVE---------------------VCGHGFRTMACS 324 +S+ +V++ +R M D + E HG R+ Sbjct: 320 PRGG--ILSDMSVSAVMRRMQEDAETEAKMAGRPVSAAGWRDTRTGRPAVPHGLRSSFRD 377 Query: 325 SLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISP 384 E G + RD E ++H+ + V AY +++ LE RR M++ WAD L + Sbjct: 378 WAAEVG-YDRDMAEIALAHLVGSEVERAY-RRSDMLERRRAMMERWADVLAGRSGASVVE 435 Query: 385 FEYA 388 F A Sbjct: 436 FRRA 439 >UniRef50_Q92LG2 Phage-related integrase n=1 Tax=Sinorhizobium meliloti RepID=Q92LG2_RHIME Length = 409 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 106/399 (26%), Positives = 178/399 (44%), Gaps = 46/399 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVY----PEITLADARVRRDEARKLL-ANGVD 55 ++L V NGSK + ++ + KQ+ +G Y +LA+AR RRDE ++ A G+ Sbjct: 26 LYLRVRENGSKSFIVKATIDKKQREWTIGSYGSEEHHFSLAEARKRRDEIMAVIRAGGIS 85 Query: 56 PGDKKKNDKVEQSKARTFKE-----VAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALG 108 K + + ++ TF +IE + + H + +LE ++ Sbjct: 86 EPTGKSVTQSVEPESTTFPAPLFGPFSIELIQQIEGGFRNAKHRAQWRSTLETY-CKSIW 144 Query: 109 ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLI-DYNPAQE---- 163 E+ + + T D+LA ++ + + + E A+R++ R ++ A G NPA Sbjct: 145 EKRVDRITTDDVLAILRPIWST-KAETASRVRGRIERVLNAAKVRGFRSGENPAAWQGHL 203 Query: 164 --MAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFAR 221 + R H PAL + +P L K+ + + A++ +L RS ELR A+ Sbjct: 204 QLLLPKRQKLQRGHHPALPFQDLPTLWQKL--TSIDTIASAALQFLILTAARSGELRGAK 261 Query: 222 WSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDL 281 W E D E +WTIP R K HLVPLS + ILK++++ D Sbjct: 262 WEEFDLEKRLWTIPASR------------MKAAREHLVPLSDSCIEILKRMQKIR-HSDF 308 Query: 282 IFIGDHDSHKPMSENTVNSALRVM--GYDTKVEVCGHGFRTMACSSLVESGLWSRDAVER 339 +F G + H P+S+ T++ L + GY HGFR+ E +SR+ E Sbjct: 309 VFPGTRE-HAPLSDMTLSKVLHGLCKGY------TVHGFRSTFRDWCGEKTDFSREHAEA 361 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNR 378 ++H ++V AY + LE RR ++ W F+ R Sbjct: 362 CLAHTIGSAVERAY-RRGNSLEPRRRIMTAWEAFILTGR 399 >UniRef50_C6XJP3 Integrase family protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJP3_HIRBI Length = 395 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 101/387 (26%), Positives = 170/387 (43%), Gaps = 34/387 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V G++ W YR+ K+ + LG YP ++L++AR + R L N D K Sbjct: 28 LYLNVKQTGARNWLFIYRWGDKRPSIGLGGYPSVSLSEARKQAAMCRDWL-NQTPRKDPK 86 Query: 61 KNDKVEQSKART---FKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K V + F A+ K + H + +LE + + E+ Sbjct: 87 KEWMVLNAPEVRIEPFGPFALRHIDAIKGDFRNAKHIAQWRSTLERYAEPIW-AKPLNEI 145 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV------A 169 + +L ++ + + + E A R++ R A++ A G+ + G + Sbjct: 146 EVDHVLKCLEPIWAT-KNETARRVRGRIEAVLESARVRGMREDPNPASWNGQLKHVLGRK 204 Query: 170 SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 ++H ALE ++ + +G + A++ T+L RS E+R A W+EID EA Sbjct: 205 RPKQKHLAALEYDQMHAFWQTLRQKSG--IGALALQFTILTAARSGEVRGATWNEIDIEA 262 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 IW+IP ER K H+VPLS ALAI+ I + +LIF+G Sbjct: 263 GIWSIPAER------------MKAEKPHMVPLSQAALAIIDHISKARQG-ELIFMGMRAG 309 Query: 290 HKPMSENTVNSALRVMGYDT--KVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 P+S+ T+ ALR M V HGFR+ + R+ +E ++H Sbjct: 310 K-PISDMTMTKALRDMKLTNSQGEAVTAHGFRSTFSDWARNETDFPRELIEESLAHSLG- 367 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFL 374 V AAY + + +E RR +++ WA ++ Sbjct: 368 KVEAAY-RRGQAIERRRALMEAWALYV 393 >UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanella RepID=A4Y9I4_SHEPC Length = 432 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 86/410 (20%), Positives = 163/410 (39%), Gaps = 43/410 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLAL--GVYPEITLADARVRRDEARKLLANGVDPGD 58 +++ V G YW ++Y GK++ + GVYP ++L +A+ + + L G+DP Sbjct: 34 LYIRVQTEGVAYWEVRYSVNGKRRSMVPNGGVYPAMSLVEAKAEAAKVKLLAKQGIDPLA 93 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 ++ ++ ++ +T ++ +W+ H ++ ++ A+G+ + ++ R Sbjct: 94 ER--ERQQEITIKTVNDLFDDWYQCTAPRL-KHPEIPMRMYTKDIKPAIGQLKVTDVNAR 150 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA-SCNRQHRP 177 D+ A + V S R VA + + +A + + NPA A A + Sbjct: 151 DIRAILHKVVKSNRPTVANKTLLFCKQLFNHACKLDVASGNPAAAFNTADAGGLEKNRTR 210 Query: 178 ALELKRIPELLTKIDSYTG--RPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 L L I + + A+ L L + +R EL A+WSE DF+ +W +P Sbjct: 211 VLSLNEIAAAFPVLRNSRPIFSHENYLAVALLLCLGVRKGELIAAKWSEFDFDQQVWRMP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH--DSHKPM 293 ER SK +PLS + LK++K + +F + + Sbjct: 271 KER------------SKTGVGITIPLSEFVIEWLKELKIIACGSEYVFPARKASKRREYI 318 Query: 294 SENTVNSAL----------------RVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAV 337 + +T+N AL ++G H R + L + Sbjct: 319 ANDTLNHALAKLFGQKHDSNKQPFENLLGKAGVEHFTVHDLRRTCRTLLASLKV-PPHIA 377 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD--VNRERFISPF 385 ER ++H + + Y H ++LEERR L A + +N + + F Sbjct: 378 ERCLNHKLKG-IEGTYNH-HDYLEERREALDKLAALISPIINNQTNVISF 425 >UniRef50_D1Y2Y2 DNA integration/recombination/inversion protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2Y2_9BACT Length = 406 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 107/400 (26%), Positives = 181/400 (45%), Gaps = 45/400 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + G K W ++ G+++ + +G YP ++L +AR RD+ + GV Sbjct: 25 LYLRISTKGKKKWLIRSFVGGRERKVVIGEYPVMSLQEARRERDDRKMKARTGV------ 78 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 ++K TF +V W +K S DH + + +E L L R +A++ + Sbjct: 79 ----SIRNKTVTFGDVFARWLKKKEKAVSPDHYKIIKRRIEMYLLPYLANRPVADISRPE 134 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR-PA 178 LL ++ G ++ A R +I+ A G + N A +++ ++ ++ A Sbjct: 135 LLEVLQHPIERGLIDTARRTGALARSILDAAADKGEVALNIAADLSRSLPEWEVRNFKSA 194 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 + + + LL ID Y R + R+A+ + F+R SELR A W+EI + W IP Sbjct: 195 FDPREVRRLLLAIDCYP-RQIVRYALRMVSYTFVRRSELRRATWAEIHEDE--WHIP--- 248 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF----YGAHDL----IFIGDHD-- 288 +K + +VPLS QAL IL +++ + IF + Sbjct: 249 ---------VVHAKKKRIQIVPLSRQALEILDAMRRIAQIRWKGQPFEDKPIFPSTRNTP 299 Query: 289 -SHKPMSENTVNSALRVMGYDTKVEVCG-----HGFRTMACSSLVESGLWSRDAVERQMS 342 M + + AL+ + HGFR MA + L E W +A+ERQ+S Sbjct: 300 SGSPYMGISAMEVALKWLVAHVPAPDTPPLIDLHGFRHMASTLLHEHH-WDHEAIERQLS 358 Query: 343 HMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFI 382 H+ R+ A Y K++ L RR M+QWWAD+LD +E + Sbjct: 359 HLKRDKTEATY-DKSKLLPLRRRMMQWWADYLDAVKEGRV 397 >UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWR9_9PROT Length = 391 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 81/375 (21%), Positives = 144/375 (38%), Gaps = 19/375 (5%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 + V G+K + Y+ G++K L+ G YP ++L +A + +EA+ L G DP K Sbjct: 30 VRVSTTGTKTFVFIYKINGQKKRLSFGTYPAMSLNEAHLLYEEAKLELEKGNDPALIKAK 89 Query: 63 DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLA 122 + T E+ + K + + L ++ R E+ D+ A Sbjct: 90 KSQLEKNEVTIPELIKLYINQYAKVRKTSWEEDERQLNKDILPRWKNRKAIEINKSDVHA 149 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELK 182 + + G A RL + YA + G + NP E+ +R L Sbjct: 150 VLDTLIERGAPIGANRLLAVLKKVFNYAKEKGYVTNNPCDEITPPATETSRDR--VLTAN 207 Query: 183 RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIP 242 I ++D T+ A++ L+ R E+ ARW++I W IP Sbjct: 208 EIKTFWHQLDCTNMHSSTKNALKFQLITLQRRKEVALARWNDI--HGDTWVIPA------ 259 Query: 243 GVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD-HDSHKPMSENTVNSA 301 +K + H V LS A +L + K + +F K + + ++ A Sbjct: 260 ------GTAKNKKRHDVHLSQFAKKLLIEAKSYSKDSPFLFPSPCGAGSKHIRPDALSKA 313 Query: 302 LRV-MGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 ++ M + H R A + L +S + +R + ++H SV A Y K E+ Sbjct: 314 VKRNMETLMVQDFSPHDLRRTAATFLTKSKIANRLVLSLMLNHSQGKSVTAVY-DKYEYF 372 Query: 361 EERRLMLQWWADFLD 375 E++ + W L+ Sbjct: 373 TEQQKAWEAWGVKLE 387 >UniRef50_A0Q3W3 Phage integrase n=8 Tax=Francisella RepID=A0Q3W3_FRATN Length = 413 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 99/399 (24%), Positives = 175/399 (43%), Gaps = 29/399 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V GSK W+ +Y K K L +G YP I+L AR + ++LA G DP +K Sbjct: 28 LYIKVSKAGSKSWQFRY----KGKWLGIGSYPAISLKQARDEAFKYNQMLAGGKDPKLEK 83 Query: 61 KNDKVEQSKART-FKEVAIEWHGTNKKW---SEDHAHRVLKSLEDNLFAALGERNIAELK 116 + K + + + A E +K + SE+ +R L + +L NI +++ Sbjct: 84 EKGKYQDNNLFSIVSAKAFETKDPSKPYGWKSEEVYNRNLSIYNRFILPSLKTFNINDIE 143 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 L ++ + +++ I YAV G++ YN A+++ Sbjct: 144 PYQLAGILE----TTTPSNQRKIKNLLNMIFTYAVGKGILKYNIARDIQAEKEDPKGFEF 199 Query: 177 --PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 P + +LL I +Y G+ T+ A++L +L+ R + + +W +I Sbjct: 200 INPVEDKYNFSQLLNDIYNYKGQYNTKMALKLAVLVGFRPNNIVSMKWEDIQEAN----- 254 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 + + IP V S KM PLS QA +L +IK++ G + +F ++ Sbjct: 255 -IDGKKIPFVFISADNMKMSRDFRQPLSKQAYKLLMEIKEYNGGFEYVFHSLSKKK-HIT 312 Query: 295 ENTVNSALRV-MGYDT--KVEVCGHGFRTMACSSLV---ESGLWSRDAVERQMSHMARNS 348 +++ ALR +GY+ K + HGFR + + W D++ +SH N+ Sbjct: 313 IESLSKALRDTLGYNGTDKPKQHTHGFRKSVRTYISSIRSKYNWCSDSIRMILSHSKENA 372 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVNRER-FISPFE 386 + Y K + L ER MLQ WAD++D + I + Sbjct: 373 IDNIY-DKNDFLLERSQMLQLWADYVDDVKANSNIINID 410 >UniRef50_Q98MP8 Probable prophage integrase n=2 Tax=Proteobacteria RepID=Q98MP8_RHILO Length = 402 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 88/399 (22%), Positives = 174/399 (43%), Gaps = 42/399 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT---LADARVRRDEARKLLANGVDPG 57 ++ + P+G +W ++Y +G+++ ++L T L + + R+ + G+DP Sbjct: 25 LYFFIAPSGRPFWAIRYMLKGRRRQMSLTDSIPATVRELKQIELLSETEREKVRKGIDPL 84 Query: 58 DKKKNDKVEQSKAR----TFKEVAIEWHGTNKKWSE--DHAHRVLKSLEDNLFAALGERN 111 +++ K + TFK VA+++ N+ + H + +L ++ +G Sbjct: 85 AEREAAKAASPEPVRQLVTFKSVALDYIAANRGGWKNAKHVQQWENTLATYVYPVIGHLE 144 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID--------YNPAQE 163 + T ++L ++ + + + E A+R++ R I+ A G+ + +NPA+ Sbjct: 145 PQSITTAEVLKILQPLWAT-KRETASRVRSRVETIIGAAKAKGMSEKPEIWANHHNPARW 203 Query: 164 MAGAV----ASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRF 219 + H A+ IP I + A++ +L R++E Sbjct: 204 ADNLEFWLNGKQEKNHFSAMPYPEIPAFAQSI--AEREDYSTKALQFLILTATRTNETLG 261 Query: 220 ARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAH 279 A WSEID E ++WTIP R K H VPLS++AL ++ + + G + Sbjct: 262 AEWSEIDTEKAVWTIPASR------------MKSGKEHRVPLSSEALKLVASLLRIEG-N 308 Query: 280 DLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVER 339 +F G +K +S + +R + HGFR+ E ++ VE Sbjct: 309 PYLFPG-AIRNKSLSNMALLMVMRGLKL---GHYVPHGFRSAFRDWAAEETVYPNHIVEM 364 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNR 378 ++H +N V AAY + + +E+RR +++ W+ +L R Sbjct: 365 ALAHTIKNKVEAAY-RRGDLMEKRRQLMEDWSAYLASAR 402 >UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXN0_MARAV Length = 396 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 87/397 (21%), Positives = 159/397 (40%), Gaps = 39/397 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + + G+K W ++R+ GKQ ++LG YP +L +AR +A LLA G++P Sbjct: 9 LAIRISIRGTKTWFYRFRFRGKQDAVSLGRYPTTSLLEARDVHGDACALLAKGINPKKAF 68 Query: 61 KNDKVEQSKARTFKEVAIEWH---------GTNKKWSEDHAHRVLKSLEDNLFAALGERN 111 K K + T +E+ +W T + SE + L LG+ Sbjct: 69 KESKKVAEQTWTGQELFDDWIRVYSSTPSTRTKRTPSEQVVRQTTWRWNKYLRRTLGQIL 128 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC 171 I + + + I AV E A + + AV GLID NP + + Sbjct: 129 IPTITKQVAASLISAVSELNSREQARKCLTILNGMFGLAVAKGLIDENPCYGLQPSKLGA 188 Query: 172 NR--QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 ++ L + ++ + R A++ LL +R E+ A+WS+IDF Sbjct: 189 SKGSPRSRVLTPSEMKRFWEALEDSSLDTSVRAALKAILLTGLRRGEICQAKWSDIDFNT 248 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 ++W +PPE +K R H VP+ST +L+ + +F Sbjct: 249 NVWNLPPE------------ITKSRRKHTVPISTALKNLLQSLDM---DGTYVFRSTRAP 293 Query: 290 HKPMSENTVNSALRVM-GYDTK-----------VEVCGHGFRTMACSSLVESGLWSRDAV 337 +P+ N++ +A+ + G T+ H R + L E + Sbjct: 294 WQPIGSNSLTTAIARLQGIKTQQVNEKAPLFGLERFSVHDLRRTVATGLGEYCETPPHVI 353 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 R ++H++ + + Y +A +E+ L+ W+ ++ Sbjct: 354 RRILNHLSDDRLEDIY-QRATLFDEQAKALERWSTWV 389 >UniRef50_A4A7S2 Phage-related integrase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7S2_9GAMM Length = 412 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 110/400 (27%), Positives = 172/400 (43%), Gaps = 48/400 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV GSK W +Y++EG+++ L LG YP ++LA AR+RRD AR G DP + + Sbjct: 28 LYLLVARGGSKNWIYRYQHEGRRRELGLGGYPAVSLAKARMRRDAARDQRQQGHDPLEVR 87 Query: 61 KNDKVE------------QSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAA 106 + + + A TF VA E+ N + H + +L+ F Sbjct: 88 DRQRAQLRAQMAAETAERERAAMTFLRVADEFIDNNAAGWTNRKHGQQWRNTLKTYAFPI 147 Query: 107 LGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG 166 LG + E+ T +L + + + + E A RLQ R ++ YA G + + G Sbjct: 148 LGVVPVGEVTTDQVLQVLTPIW-TEKTETAKRLQGRIERVLDYATTKGHREGDNPARWRG 206 Query: 167 AV--------ASCNRQHRPALELKRIPEL---LTKIDSYTGRPLTRWAIELTLLIFIRSS 215 + +H+ AL PEL LT +D+ GR L + T +S Sbjct: 207 HLDNVLPRPGKVHRVEHQRALPYLEAPELAAKLTDVDTAAGRALLLTLLCATR-----TS 261 Query: 216 ELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF 275 E A WSEID + W IP R K H +PL A+A+LK Sbjct: 262 ETLEATWSEIDLDRKEWRIPAVR------------MKAGKEHRIPLCDAAVAVLKTQSVH 309 Query: 276 YG-AHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSR 334 G D +F G +S + + L+ + + HG R+ + E + Sbjct: 310 QGERGDWVFPGQKRGK-CLSNMAMTNVLKRTDWLERT--SVHGLRSTFRDWVGEKTRYPE 366 Query: 335 DAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 E ++H + V+AAY +A+ +E+RR M+ WA FL Sbjct: 367 RMAEVALAHQLTDKVQAAYF-RADLMEQRREMMNEWAAFL 405 >UniRef50_A6Q4N1 Site-specific recombinase, phage integrase family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q4N1_NITSB Length = 412 Score = 254 bits (648), Expect = 4e-66, Method: Composition-based stats. Identities = 95/398 (23%), Positives = 180/398 (45%), Gaps = 37/398 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++L+ PNG K +RL Y Y GK+ +G YP+I+LA AR + E ++L+ NG+DP K Sbjct: 31 LYILIKPNGRKIFRLDYVYAGKRNTYTIGDYPQISLAQARKIKYEVKELIKNGIDPNRYK 90 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNKKWSEDHA---HRVLKSLEDNLFAALGERNIAEL 115 + K E + F IE +K A + + + + +GE I E+ Sbjct: 91 QEQKRIKELEANKKFTSFVIERFIQHKAKEVSKARLQKNYINTFANYITPFIGEVKIDEV 150 Query: 116 KTRDLLAPIKA---------VEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPA--QEM 164 +D++ +K +G+ A + + ++ +A+ + NPA ++ Sbjct: 151 TKQDIIKIVKNTYSTKLQKDNRSTGKTYKAREVYRLLKSLFDFAIHNDYTQTNPAVGIDI 210 Query: 165 AGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE 224 + A+ +RI E+ KI S P R ++ L +R + +W Sbjct: 211 DSLIPKHKPTRHKAVTNERIKEIYQKICSLQN-PYFRLPLQYIALTAVRFGNVANLKWDY 269 Query: 225 IDFEASIWTIPPEREPIPGVKHSHRGSKMR-TTHLVPLSTQALAILKQIKQF-YGAHDLI 282 DF+ + P E K + +PL+ + +++Q K +++ Sbjct: 270 KDFDKRVIIYPAE------------AMKTKNQPFRIPLTDAIVKVIQQAKAIASPYSEIV 317 Query: 283 FIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVES---GLWSRDAVER 339 F ++HKP+S+NT+ L++ + E HGFR+ + +E S +A+E Sbjct: 318 FGSPINAHKPISDNTLRKVLKI--DLNEPEQDLHGFRSSFETIALEHQKEHGCSFEAIEA 375 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 Q+ H + V +Y+ +++ LE+R+ +L WWA++L+ Sbjct: 376 QLHHNIGSKVTQSYL-RSDFLEDRKELLNWWANYLNSQ 412 >UniRef50_C5F036 30S ribosomal protein S15 n=3 Tax=Campylobacterales RepID=C5F036_9HELI Length = 397 Score = 253 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 97/389 (24%), Positives = 175/389 (44%), Gaps = 28/389 (7%) Query: 1 MHLLVHPN--GSKY-WRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG 57 +++ V+PN G+ Y + YR K ++ LG YP I+L DAR++ +E L Sbjct: 28 LYVEVNPNKYGATYTFYFCYRQSNKVNVVYLGKYPAISLMDARLKANELNLRLDKNEVLK 87 Query: 58 DKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + + +K + + +E+ EW K + + LE ++ G + +A+L Sbjct: 88 IETRREKRNKERI--LREIFEEWKQIAIKGKINQ--DFARPLELHIINQYGNKPVADLTK 143 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV---ASCNRQ 174 +D+L + + + E R +++YA+ + + Sbjct: 144 QDVLKSFDKLYLEDKRETIKRTYIHLKNLIKYALNRDYLQATNLLTLDIDTLYGKLTPTP 203 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 R +L +LL IDSY G + A++++ +F+RSS +R +W +D + I I Sbjct: 204 FRAITDLDTFRDLLLAIDSYNGNLFVKVALQVSPYLFLRSSTMRNLKWEYLDEKEKILKI 263 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P K + LVPLS L + IK+ IF D K ++ Sbjct: 264 PA------------NIMKAKEEFLVPLSDSVLDKILAIKELTYPSPYIFPSDISKGKALA 311 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVE---SGLWSRDAVERQMSHMARNSVRA 351 ENT+N A++ +G+ + HGFR+ A + L E + + +E + H RN V+A Sbjct: 312 ENTLNYAIKRLGFG--ELMVYHGFRSTASTFLYENKKNHKQDSEVIELCLDHRERNKVKA 369 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRER 380 Y +++ LE+RR ++QWW+D++D + Sbjct: 370 VY-NRSLRLEDRRELMQWWSDYIDNLKMS 397 >UniRef50_Q21D10 Phage integrase n=3 Tax=Alphaproteobacteria RepID=Q21D10_RHOPB Length = 429 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 98/406 (24%), Positives = 173/406 (42%), Gaps = 51/406 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + GSK W +Y+ G+ LG ++ L +AR + ARK+ NG DP K Sbjct: 28 LYLQIAEGGSKSWLFRYKLHGRTHWHGLGSLRDVGLEEAREKATGARKVRRNGGDPIQAK 87 Query: 61 KN----DKVEQSKARTFKEVAIEWHGTNKKWSE--DHAHRVLKSL----------EDNLF 104 + ++E +KA TF E A + N+ + HA + + +L +++ Sbjct: 88 RQAEAAARIEAAKAITFGEAAKRFIKANRAGWKNAKHADQWVMTLLGVDQKGKPSKNDYC 147 Query: 105 AALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSG-LIDYNPAQE 163 + + I + T +L I+ + S + E A R++ R ++ A G NPA+ Sbjct: 148 KTIRDLPIGAIDTTLVLRIIEPIWAS-KTETATRIRSRIEQVIDAAKAKGEFNGENPARW 206 Query: 164 -------MAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSE 216 + ++ PAL +++P+ + K+ G A+E +L +R Sbjct: 207 KGHLDNLLPATSKVRKVRNHPALPYRQLPDFMRKLRERDG--AAAAALEFQILTAVRPGN 264 Query: 217 LRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY 276 A+W +ID + S+WTIP K H VPLS ALA+L +++ Sbjct: 265 AVAAKWDQIDRQTSVWTIPAA------------LMKSDAEHRVPLSKAALAVLDRMEATK 312 Query: 277 GAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTK--------VEVCGHGFRTMACSSLVE 328 + IF P+S+ ++ + + M + E+ HGFR+ E Sbjct: 313 DDSEYIFPNTKGK--PLSDASMAAVIDRMNELERRWIDPKLDREIVPHGFRSSFRDWAAE 370 Query: 329 SGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 G + E ++H + V AAY + L+ R M++ WAD+ Sbjct: 371 HG-YDDPVAEAALAHKVSDEVVAAY-RRTTFLDLRNRMMEDWADYC 414 >UniRef50_B4SNF6 Integrase family protein n=2 Tax=Proteobacteria RepID=B4SNF6_STRM5 Length = 397 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 104/384 (27%), Positives = 178/384 (46%), Gaps = 34/384 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V + +K W +YR+EGK+ + LG I LA+AR ARK++ +G DP + Sbjct: 28 LYLQVTASCAKSWVFRYRFEGKRPEMGLGPLHVIGLAEAREAAGAARKMVQSGQDPLAGR 87 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + V + TF E A + + + HA + ++LE LG+ + ++T Sbjct: 88 RAAAVATASIPTFWEAATAYIAEREAGWTNPKHAGQWTRTLETYAKPVLGDLRVDRIETE 147 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYA-VQSGLIDYNPAQE-------MAGAVAS 170 +LA ++ + + + E A+R++QR A++ VQ NPA+ + A Sbjct: 148 HVLAVLRPIWTT-KTETASRVRQRMEAVLDAVTVQKKRSGENPARWRGHLAVILPKPTAV 206 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 ++ AL +P + + S G A+E T+L R+ A E+D A Sbjct: 207 TKVENFAALPYAELPSFMAALRSRHGEA--ARALEFTILTAARTGMTLGATPGEVDLAAG 264 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 WT+P R K + H VPLST ALA+ + + DL+F D + Sbjct: 265 TWTVPGSR------------MKAKVEHTVPLSTPALALARPRIK----RDLLFPNDLS-N 307 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 +P+SEN + + L+ MGY + HGFR+ E + D E ++H R+ + Sbjct: 308 EPLSENAMLALLKRMGYGY---ITVHGFRSTFKDWASEMTDYPDDLSEAALAHRIRDKAK 364 Query: 351 AAYIHKAEHLEERRLMLQWWADFL 374 AAY + +++RR ++ WA++ Sbjct: 365 AAYK-RGTMIQKRRELMNSWAEYC 387 >UniRef50_B9R123 Site-specific recombinase, phage integrase family protein n=3 Tax=Alphaproteobacteria RepID=B9R123_9RHOB Length = 451 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 172/410 (41%), Gaps = 47/410 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + + +G K W L+ K++ + LG YP+++LA AR R E ++L+ GVDP + + Sbjct: 56 LAIQLLSSGGKTWILRTTVGYKRRDIGLGGYPDVSLAQARERARETKELIRQGVDPIEHR 115 Query: 61 KNDKVE----QSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 K+ + + Q + +F + + +E H + +L+ LG+ + Sbjct: 116 KSLQSQLVASQMRGLSFSDAVDRYLSVKSAELRNEKHKEQWASTLQTYALPHLGKMLVDN 175 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSG-LIDYNPAQ---EMAGAVAS 170 + T+D+L ++ + + + E A+RL+ R A++ ++ SG NPA+ + + S Sbjct: 176 ITTQDILLVLQPIW-TDKTETASRLRGRIEAVLSWSTVSGHRTGENPARWAGNLKELLPS 234 Query: 171 CNR----QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 ++ + PA+ L + G A+E L RS E+R A WSEID Sbjct: 235 PSKIAKSGNWPAIALVEADSWFEGLRLRDG--TAARALEFLALCASRSGEVRKATWSEID 292 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 + W IP ER K+ H VP + L IF Sbjct: 293 HKQKTWVIPGER------------MKVGKDHRVP-LSATALALLDALPKREDSPFIFPAP 339 Query: 287 HDSHKPMSENTVNSALRVM-------------GYDTKVEVCGHGFRTMACSSLVESGLWS 333 P+S+ +++ +R M HG R+ ESG ++ Sbjct: 340 RGG--PLSDMALSAVMRRMHSVELDNGRPGWRDPRNGHPAVPHGLRSTFRDWAAESG-FA 396 Query: 334 RDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFIS 383 RD E +SH + V AY +++ +E RR M+ WA+FL I Sbjct: 397 RDMAEIALSHSVGSEVERAY-RRSDLIERRRGMMSAWAEFLRGATASNIV 445 >UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP99_HAHCH Length = 416 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 88/400 (22%), Positives = 165/400 (41%), Gaps = 29/400 (7%) Query: 1 MHLLVHPNGSK---YWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVD 55 + L ++P K W +YR K L+LG YP I+L AR + + R+ L G+D Sbjct: 26 LSLRIYPKRGKIARTWVFRYRRPATKKPAKLSLGDYPVISLRAARQQAEIMRQQLFEGLD 85 Query: 56 PGDKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLK---SLEDNLFAALGERNI 112 P +K + E + A T +++ W K E + +L +LG Sbjct: 86 PQYVQKEQRAENANAITTQQLFESWLTLQKSAKEVTDRTLADHEARWRVHLEKSLGPLLA 145 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA--VAS 170 + R + A + ++ G E + + R+A + LI NP + ++ + Sbjct: 146 KHVIRRQIAAVLDSMVAKGIKEETRKCLCLLKMLFRFAEERHLIKENPIEGLSAKSFKIT 205 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 AL L + +DS + P T A +L +L R E+ RWSE+D Sbjct: 206 AGAPRDRALPLSELRSFWRLLDSASITPATANAFKLLILTGARRGEVTMMRWSELDLTQG 265 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +W +PPER +K R H + L A+ +++ ++ G + + + Sbjct: 266 MWVLPPER------------TKNRKAHTLYLPNLAMRLIESMRPISGHGEYVL-SLGNGI 312 Query: 291 KPMSENTVNSALRVMG--YDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 P+S + LR + ++ H R A ++ E S +E+ ++H R+ Sbjct: 313 TPLSTEGLTVTLRRLSTRLESVPHFTVHDLRRSAATAWGEHLKTSPHVIEKMLNHQPRDR 372 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLD---VNRERFISPF 385 + A Y +A +++E+++ + W + ++ N + P Sbjct: 373 LVATY-QRAAYIDEQKMAWKAWGEMVENHVANDFGNVVPL 411 >UniRef50_B4WZP4 Site-specific recombinase, phage integrase family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WZP4_9GAMM Length = 400 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 113/386 (29%), Positives = 194/386 (50%), Gaps = 19/386 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV +G++ W+L YR++G+ K++ LG PE+TL+ AR RDEAR+L+A+G+DP + Sbjct: 26 LYLLVETDGNRTWKLSYRFDGRSKVITLGPCPEVTLSFARQLRDEARELIADGIDPISRC 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGT--NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 +V TF+ VA +W + SE+ R + +E+ L A++G+R ++E+ Sbjct: 86 VKREVFSPSVETFEAVARDWLERVYRLEVSEEQFRRTKRQMENYLIASIGKRVVSEVTPE 145 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH-RP 177 DL + A+ G L+ R+ I +A +G+ Y + + + Sbjct: 146 DLKSLAAALGAEGHLDRGKRVLGIGKRIYTHARDTGVAGYQQTGALRRRLTGSGTEPEFL 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 ++I +L + + R T A++LT+ + R SE+ ARWS++D +A W I Sbjct: 206 LSTREQILDLASGVLGQWSRTTTTAALKLTVWLLARPSEIVNARWSDMDLDAGEWRIHRN 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 P GSK+ T VPL QA+ +L++I+ G + IF G D K + +T Sbjct: 266 STGSP------TGSKIIT---VPLPRQAVELLREIEPITGRQEYIFPGTRDRKKHLGAST 316 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +++AL+ + T V RT+A ++L E G + Q+ N + Sbjct: 317 LSAALKKVTRTT--PVSTDNLRTLAATALGELGYQA-----EQIQSQLLNQTGDEPADRQ 369 Query: 358 EHLEERRLMLQWWADFLDVNRERFIS 383 +L++RR MLQ WAD+LD ++ Sbjct: 370 TYLDKRREMLQAWADYLDNTAIGKVT 395 >UniRef50_Q7MPT5 Site-specific recombinase, phage integrase family n=14 Tax=Gammaproteobacteria RepID=Q7MPT5_VIBVY Length = 434 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 97/409 (23%), Positives = 169/409 (41%), Gaps = 41/409 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++ V GS YW ++Y ++ LG +P ++LADAR+ RK + +G+DP +K Sbjct: 44 LYFCVRKQGSPYWMIRYTTAKGRREATLGQFPLMSLADARIAAAYFRKEVRDGIDPLLEK 103 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + K+E T ++ +W+ T+ H + ++ +G + IAE+ RD+ Sbjct: 104 Q--KIELPDIETVDQLFHDWYRTDLSRRLKHPKIPYRVYTKDISPVIGIKCIAEVTARDV 161 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQ----EMAGAVASCNRQHR 176 ++ + S R +A + R+A++ L NPA + AG V S + Sbjct: 162 REVLERIRESNRPTIANDTLMYMKQLFRHAIKLDLTLNNPAAAFTVDDAGGVESSKDRML 221 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 E+ + + GR A L L++ +R SEL A W E+D +W +P Sbjct: 222 SKEEIHYAFSVFHTHINSFGRD-NYLACCLFLVLGVRKSELCEAMWREMDLTTGVWDLPK 280 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP-MSE 295 ER SK +PL QA+A +++ +F SH+P M Sbjct: 281 ER------------SKTGVPISIPLPRQAIAWFNELQIRACGSPYVFPARRASHRPHMGP 328 Query: 296 NTVNSALRVM-------------GYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMS 342 +T+N A+ + H R S G+ + + ER ++ Sbjct: 329 DTLNRAISKLFGREPGRKKQPPNKMGKLEHFTVHDLRRTFRSLAASLGI-AGNVAERCLN 387 Query: 343 HMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYAKIN 391 H + V Y + ++ EERR+ Q AD ++ + FE A + Sbjct: 388 HKLKG-VEGIY-DRHDYFEERRIAHQTVADVVE-----PLVNFEPASQH 429 >UniRef50_Q1GUV7 Phage integrase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GUV7_SPHAL Length = 403 Score = 248 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 98/390 (25%), Positives = 174/390 (44%), Gaps = 41/390 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G+ W L+ + +GK++ + LG +TLA+AR + E RK + V+ D Sbjct: 25 LFLKVGKTGAASWLLRLQRDGKRQDIGLGSAKLVTLAEARAKAAELRKAVK--VEKRDVL 82 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNK-KWSED-HAHRVLKSLEDNLFAALGERNIAELKTR 118 K E++ TF+E A ++H N+ W D + + L SLE+ F LG+ + Sbjct: 83 TERKDEEAAKVTFREAATQYHSENEAGWKSDVYGRQWLASLENYAFPKLGDMTTGGITAA 142 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-----NPAQEMAGAVASCNR 173 D+++ + + E A +++ R A++ Y+ G N + + + + Sbjct: 143 DIISVLTPIW-QEIPETARQVRNRICAVLDYSHAKGWRSSEAPSGNSSLKAGRGLPRQIK 201 Query: 174 Q--HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 + +R A+ +P LT + +R A++L +L +RS E+R A+W E D + + Sbjct: 202 KPANRKAMPYVAVPPFLTALRRKPSY--SRLALDLLILTGVRSQEVRLAKWDEFDLDQRL 259 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY-GAHDLIFIGDHDSH 290 WTIP E K H+VPLS ALA+L + +++F G Sbjct: 260 WTIPAEH------------MKRSRAHIVPLSEAALAVLVKADAMRLEGAEVVFPGMTGKA 307 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 MS T+ +R M + HGFR+ G + VE ++H ++V+ Sbjct: 308 --MSNMTLLKVMRDM----QEPFHVHGFRSSFTDWAANEG-FPNAVVEAALAHKTPDAVQ 360 Query: 351 AAYIHKAEHL------EERRLMLQWWADFL 374 AAY + +L R +++ W ++ Sbjct: 361 AAY-RRTTYLGTPDNPGARVKLMEAWGNYC 389 >UniRef50_A2SG96 Integrase or site-specific recombinase n=19 Tax=Proteobacteria RepID=A2SG96_METPP Length = 466 Score = 248 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 100/411 (24%), Positives = 169/411 (41%), Gaps = 45/411 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE------------------ITLADARVR 42 ++ V P+G+ R YR +++ L LG Y ++LA+AR+ Sbjct: 44 LYAYVAPSGTVSLRYDYRIGRRRETLTLGRYDATAPARVPRSLDVLEYGMGLSLAEARLL 103 Query: 43 RDEARKLLANGVDPGDKKKNDKVEQSKARTFKEVAIEWHGTN-------KKWSEDHAHRV 95 +A++ L GV P K K +S A TF + A + ++ ++ Sbjct: 104 LTKAKRALEQGVSPSRAKAEQKAAESDALTFGKWAERYFEFKGDPKSKGEQLADSTLAMR 163 Query: 96 LKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL 155 + + L LG+ + E+ L A ++ VA ++ + R+ + G+ Sbjct: 164 RSTYKRALEKPLGKLMLEEITPNRLAALCDDIKAQRGPAVAVHAREIVLMVYRHVQRKGI 223 Query: 156 IDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSS 215 NPA+ + + + AL + L +D P R A+ LL +R Sbjct: 224 EVPNPAERVQASAIARFEPRDRALSPSELRLFLAALDQCATMPTLRLAVRFVLLTGVRKG 283 Query: 216 ELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF 275 E A W EI F+ WTIP R K H+V LS QA+ IL ++ Sbjct: 284 EFIGATWDEIVFDTETWTIPSRR------------MKGGRAHVVYLSDQAMDILTTLRSC 331 Query: 276 YGAHDLIFIGDHDSHKPMSENTVN----SALRVMGYDTKV--EVCGHGFRTMACSSLVES 329 + A + G +DS P+S+ T+N A+R + H R +SL + Sbjct: 332 FSASRYLHPGRYDSDLPISDATLNRVIAMAIRGIQATAPEFQPFTVHDLRRTFSTSLNRA 391 Query: 330 GLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 + +E ++H+ RN + A Y + A + ERR+M+Q WAD LD+ + Sbjct: 392 K-FDERWIEMALAHVPRNRIAATY-NVARYAAERRIMMQAWADMLDLWEKG 440 >UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas putida RepID=B0KFC6_PSEPG Length = 436 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 95/395 (24%), Positives = 175/395 (44%), Gaps = 29/395 (7%) Query: 1 MHLLVHPN---G---SKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGV 54 ++L V + G S++WRL+YR GK+ + +G YP++ L +AR AR +AN + Sbjct: 49 LYLQVRASLKPGKSPSRHWRLKYRLRGKENVYVIGRYPDVGLKEARELARAARNSVANHI 108 Query: 55 DPGDKKKNDKVEQ--SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERN 111 DP KK Q ++ARTF VA EW +L++++ A+GER Sbjct: 109 DPLKAKKAKIEAQWLNEARTFAYVAEEWMKFKSADLVSKSVAGFRGALQNHILPAIGERP 168 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA-- 169 ++E+K + A I + + +A R++ +I+ +A G ++ N A + Sbjct: 169 VSEIKLEHITAIITELRYKRIMAMARRVRTIIRSILGFAEGRGWVERNVALSNTEELKIR 228 Query: 170 SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 + + + L ++D +A+ L +L+ +R EL RW ++D Sbjct: 229 HVVTSNPAIERPADLGKFLLRLDDLNLG-SVAYAMRLLVLLPVRPGELVKMRWEDVDLIG 287 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY----GAHDLIFIG 285 + W R + KH ++ H+VPL QAL +L+++ + + +F Sbjct: 288 ADW-----RYVVSKTKHLD-----KSKHIVPLPEQALVLLRELHKDRVVDDAGNGWVFGS 337 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 + + ++ +L+ + + + HGFR + E +E +SH Sbjct: 338 PVYPGRSIDATSILKSLQKVW--PEYAITAHGFRATYRTIAHEHLGIDPIVLELSLSHRM 395 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 ++ A Y +A+ L +RR Q WA++LD R Sbjct: 396 PGALGAVYA-RAQLLSQRREAAQLWANYLDQLRNN 429 >UniRef50_A5ELC2 Putative prophage integrase n=2 Tax=Bradyrhizobium RepID=A5ELC2_BRASB Length = 408 Score = 247 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 93/400 (23%), Positives = 171/400 (42%), Gaps = 32/400 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLA--DARVRRDEARKLLANGVDPGD 58 ++L+V P+G + W +Y+ G K + G E L +AR + +A +LLA G DP + Sbjct: 29 LYLIVTPSGGRRWAFRYQRNGIVKKMGFGSAKETGLKLSEARDKAIDALRLLAKGTDPRE 88 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRV-LKSLEDNLFAALGERNIAELKT 117 + ++K +R F E A EW T + A R LK + + L + + E++T Sbjct: 89 HRDDEKRRTQGSRRFGEFAEEWRQTYETGMRHKAARAKLKRIVQVICRPLHKHWVHEIET 148 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLI-DYNPAQEMAGAVASCNRQHR 176 ++ + + E + +Q I+ A+ L NPA + RQ R Sbjct: 149 AHVVNVLMPIWQQ--PETSRSARQIIKKILDAAIAHNLRPKDNPADWASRLQPIMPRQRR 206 Query: 177 P--------ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 A++ + +P + K+ + A+E+ +L R++E++ RW+++D + Sbjct: 207 RGTIRGGHKAMDYQDLPAFMHKL--SAISTQSARALEVIILTLGRTAEVQTMRWAQLDLD 264 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD 288 IW + G+K PL Q LA L++ + +F G Sbjct: 265 NGIWDL------------GFLGTKNERLKRTPLPRQTLAYLREAYDSRVNDEFVFPG-RS 311 Query: 289 SHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 +PMS T+ L+ + + HGFRT + E + + VE + H+ + Sbjct: 312 LKRPMSNMTMLKYLKEL--TGDDSLTVHGFRTTFRTWAQEQTHFEEEIVEHCLHHITGDD 369 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYA 388 AY + E L++R ++Q +AD+ ++P + A Sbjct: 370 AEKAYK-RGEALKKRLHVMQTFADYATQPPRSNVTPMKVA 408 >UniRef50_Q8DF52 Phage integrase n=1 Tax=Vibrio vulnificus RepID=Q8DF52_VIBVU Length = 452 Score = 246 bits (629), Expect = 7e-64, Method: Composition-based stats. Identities = 95/431 (22%), Positives = 184/431 (42%), Gaps = 67/431 (15%) Query: 1 MHLLVH----PNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGV 54 ++L + K W+ Y + K+ L +G YP +TL DAR + + +LL + Sbjct: 31 LYLRLRLGKNKKTKKSWQFNYHHPLTKKRIKLTIGNYPALTLKDARKKAENYLELLEKNI 90 Query: 55 DPGDKKKN--DKVEQSKARTFKEVAIEWHGTN------KKWSED---------------- 90 DP + ++ R FK+VA +W KK E Sbjct: 91 DPQEYERTGGINAIDPDKRLFKDVAEKWFEEKILAEDKKKRQEKIDDANKRAKDEGREKA 150 Query: 91 -------------HAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAA 137 ++ + L++++ ALG I +++T ++ G Sbjct: 151 SEQELEAVLRDIRYSKDIRGRLDNHILPALGNIPITKMETYLAQEALQPSYAKGIN--MD 208 Query: 138 RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGR 197 ++ Q ++ +M YA + G + NP +++ + +Q +P+++ + + EL+ + Sbjct: 209 KICQISSRVMGYAKKLGYMKSNPLSDLSEVFVNKRKQKQPSIKPEGLSELMKAMGERNIT 268 Query: 198 PLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTH 257 +TR E+ + R+SE+ RW E+DFE ++ IP R K H Sbjct: 269 KVTRAGFEMQMHTLARASEIAKMRWDEVDFENNLIKIPSYR------------MKRLNEH 316 Query: 258 LVPLSTQALAILKQIKQFYGAHDLIFIG-DHDSHKPMSENTVNSALRVMGYDTKVEVCGH 316 +PL+ +L+ +K F + +F S M++ ++N+ L+ G+ K E+ H Sbjct: 317 FIPLTKYTRGLLEYLKPFSSHLEYVFPADPRSSRPHMNQQSINANLKRAGF--KGELVSH 374 Query: 317 GFRTMACSSLVESGLW------SRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWW 370 GFR M + L +S + D +E ++H + +R Y + AE++E RR +L++W Sbjct: 375 GFRHMGSTFLNDSKKYGANEKFDADVIEACLAHCDNDKIREIY-NSAEYIEMRREILEFW 433 Query: 371 ADFLDVNRERF 381 D++ + Sbjct: 434 GDYIVEQTANY 444 >UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZM9_9DELT Length = 409 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 78/375 (20%), Positives = 146/375 (38%), Gaps = 27/375 (7%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 + + P+G+K W Y ++GK+K + LG YP +TL AR + A L G DP Sbjct: 28 VRIMPSGAKTWLFIYTFDGKRKEMNLGHYPAVTLEAARRKYRAAFDLFEQGNDPVAMHLE 87 Query: 63 DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLA 122 K E+ + ++ E+ + + + L ++ A G+R ++ RD++ Sbjct: 88 KKEERRRTPFLSDLVDEYINKHAMRFKRSWAKDQAILNRDVVPAWGQRKAVDISKRDVIL 147 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELK 182 ++ + G +A Q + +AV +++ +P + R L + Sbjct: 148 LLEKIVDRGSPGMANNCFQIIRKMFNFAVDREILEISPCTGVKMPAPKMARDR--VLSEE 205 Query: 183 RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIP 242 I L + ++ + AI+L L+ R E+ +SEI E WTIP +R Sbjct: 206 EIRVLWSGLERAKISHEVQRAIKLILVTAQRPGEVMGMDFSEI--EGRWWTIPADR---- 259 Query: 243 GVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS--ENTVNS 300 +K H V L+ AL ++ + +F P N + Sbjct: 260 --------AKNGKAHRVYLTDTALELIGE-----NTGGFVFPSPRHRENPRPIGSNAMTV 306 Query: 301 ALRVMGYDTKVE-VCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 A R +E H R A + + E G + ++ ++H +R ++ + Sbjct: 307 AHRRNKDKIPLEDFTPHDLRRTAATFMAEMGTMD-EVIDAILNHSKMGVIRVYNQYRYD- 364 Query: 360 LEERRLMLQWWADFL 374 E++ L+ W L Sbjct: 365 -TEKQATLEAWERRL 378 >UniRef50_Q31FR8 Tyrosine recombinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FR8_THICR Length = 396 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 100/392 (25%), Positives = 166/392 (42%), Gaps = 33/392 (8%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + + + P +K ++ +Y+ K L LG YP ++L AR + R+LL G+DP Sbjct: 27 LSIEIMPK-AKRFKFRYQRPVNKKINNLVLGYYPSMSLKAAREIAQQYRELLKKGIDPKY 85 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + ++KV+ F + + K WSE H + E+ L G R+ A++ + Sbjct: 86 QTSSEKVD------FDHIIQLYLKKGKADWSEKHFNTTKGRYENFLKNPFGNRDAAQITS 139 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-QHR 176 D+ +++V SG A +L + A G++ +NPA + V + Q Sbjct: 140 FDIYNLLESVAQSGSYGTAEKLSYIISGAYSQAAILGMVKFNPAAGVMKQVTKTKKTQQM 199 Query: 177 PALEL------KRIPELLTKIDSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 P L +R+ L I + + A+ L+ L+F+RS L + D + Sbjct: 200 PHFNLTRKGESERLGRFLNDIKALNKTNIAVKTALLLSPLLFMRSGSLASLKLESYDKDN 259 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 I E K + +VPLSTQA+ +L+ + +F Sbjct: 260 KWLLINAEDMK-----------KDHSDFIVPLSTQAINLLETLIAATKPKIYVFESRASK 308 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 + +N A G+ +V HG R A + L E G + + E Q+ H V Sbjct: 309 LGHIRIEAINKAKSRSGWRFD-DVTIHGLRHTATTYLTEIG-FDYEVTEMQLHHKLVG-V 365 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 R Y +KA HL++RR M+Q WAD+LD R Sbjct: 366 RGIY-NKAMHLDKRREMMQKWADYLDNLRNGI 396 >UniRef50_A5WEP7 Phage integrase family protein n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WEP7_PSYWF Length = 421 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 101/404 (25%), Positives = 179/404 (44%), Gaps = 35/404 (8%) Query: 1 MHLLVHPNGSKYWRLQY---RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG 57 + + ++PNG K + L+Y K+ + LG +I+L +A+ + + ++ NG DP Sbjct: 29 LSVRIYPNGKKEYYLRYPHPHQPNKRPRMTLGSVEDISLHEAKTKAESILDMVRNGTDPK 88 Query: 58 ---DKKKNDKVEQSKARTFKEVAIEWHGTN----------KKWSEDHAHRVLKSLEDNLF 104 +K+ +K TF E+A W K+ + + + Sbjct: 89 AIRQQKQVNKYAHLTNATFAEIAAAWRDNKINSRRQRKTGKRTFSESTLKFWDLCLGYMC 148 Query: 105 AALGERNIAELKTRDLLAPIKAVEMSGRLE--VAARLQQRTTAIMRYAVQSGLIDYNPAQ 162 A +G + ++ + +L ++++ + V A + T + +AV GL D N A Sbjct: 149 AEIGNLRMNDITSETILNVCESIQNNDNEAAFVGASTRLYTEKVFSFAVARGLCDTNVAI 208 Query: 163 EMAGAVASCNR-QHRPA-LELKRIPELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRF 219 G +A +H PA + LL + ++T LT A+ L +F+RS +LR Sbjct: 209 YTRGELAPAGSGKHLPALTKPDEFAALLKDMATFTAASELTLMAMNLLPYVFVRSIDLRS 268 Query: 220 ARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAH 279 RW EID+ +W P + M ++ +VPL+ Q + L+ I++ G Sbjct: 269 MRWDEIDWTHKLWVFSPTKGEGRED--------MVSSLVVPLADQVITRLRDIQKITGDK 320 Query: 280 DLIFIGDH-DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVES--GLWSRDA 336 +F S+ MS+ T+ A +GY K C HGFR A + L+E +S Sbjct: 321 PYVFASIRSSSNAYMSKATLVQAFHRLGYKGK--HCTHGFRAAAKTLLMEQPELRYSDIV 378 Query: 337 VERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 E Q+ H +++ AY ++ + + R M+Q WAD++D R R Sbjct: 379 TELQLGHRIKDTHGGAY-NRLDEISTRTQMMQHWADYIDSLRSR 421 >UniRef50_B1JLR8 Integrase family protein n=1 Tax=Yersinia pseudotuberculosis YPIII RepID=B1JLR8_YERPY Length = 269 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 144/182 (79%), Positives = 157/182 (86%) Query: 192 DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGS 251 + A+ELTLL+FIRSSELRFARWSE+DFE ++WTIP EREP+ GVKHSHRGS Sbjct: 76 EKAAISVSGWVAVELTLLVFIRSSELRFARWSEVDFETAMWTIPGEREPLEGVKHSHRGS 135 Query: 252 KMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKV 311 KMRT HLVPLS QALAIL++IK G +LIFIGDHD KPMSENTVN ALRVMGYDTKV Sbjct: 136 KMRTPHLVPLSRQALAILEKIKSMSGNRELIFIGDHDPRKPMSENTVNKALRVMGYDTKV 195 Query: 312 EVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWA 371 EVCGHGFRTMACSSL+ESGLWSRDAVERQMSH RNSVRAAYIHKAEHL+ERRLM+QWWA Sbjct: 196 EVCGHGFRTMACSSLIESGLWSRDAVERQMSHQERNSVRAAYIHKAEHLDERRLMIQWWA 255 Query: 372 DF 373 DF Sbjct: 256 DF 257 >UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KUI7_METC4 Length = 414 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 94/391 (24%), Positives = 154/391 (39%), Gaps = 35/391 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V P G K W ++YR GK + L LG YP + LADAR A +A G DP +K Sbjct: 30 LYLVVQPAGGKSWAVRYRAAGKPRKLTLGPYPRLGLADAREAARTALHAVAEGRDPAGEK 89 Query: 61 KNDKVEQSKART--FKEVAIEWHGTNKKWSEDHAHRVLKSLED--NLFAALGERNIAELK 116 + +VE + +T F VA ++ K L + E+++ + Sbjct: 90 QAARVEVAAVQTMRFGAVAADYIERYAKPRNRSWRETESFLTRTLDATDKWQEKDVRAIG 149 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 +D+ + AV G A RL + V+ G++D +P + +R Sbjct: 150 RKDVRDALDAVVARGASIHANRLFAALRRFFAWTVERGILDASPMAGLKPPSPEISRDRV 209 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 Y P+ +L +L R SE+ A W E D + + WTIP Sbjct: 210 LTDAELVAVWKAAGEVGYPFGPVV----QLLILTGQRRSEVVEAEWREFDLDGATWTIPR 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER +K H+VPL+ QA+ IL+ I L+F ++ Sbjct: 266 ER------------AKNDRAHVVPLAPQAVKILRCIPCVGTRSRLLFTTTGETAFSGVSK 313 Query: 297 TVNSALRVMGYDTK--------VEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR-- 346 + R+ G K H R S G+ + VE+ ++H++ Sbjct: 314 ATD---RLQGLSAKHLPEGIEVEPWRLHDLRRTFASGCARLGV-AVHVVEKALNHVSGTH 369 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 + + Y + + +ERR ++ WA LD Sbjct: 370 SGIVGVY-QRHSYGDERRCAMELWAAHLDGL 399 >UniRef50_B8GZR1 Bacteriophage P4 integrase n=3 Tax=Proteobacteria RepID=B8GZR1_CAUCN Length = 517 Score = 245 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 104/417 (24%), Positives = 174/417 (41%), Gaps = 63/417 (15%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVD----- 55 ++L VH GSK W +Y +G+ + + LG ++LA+AR + AR L G+D Sbjct: 113 LYLQVHNGGSKSWIYRYTLKGRVRAMGLGPTHRVSLAEARAQAQAARLLRDQGLDPIAAR 172 Query: 56 ---------PGDKKKNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLF 104 P K + FK+ A + TN + H + +L + Sbjct: 173 AAATPPPEPPSPPKTREIAVAEAGLAFKDAAAAYIRTNSAAWRNAKHQAQWSATLATYAY 232 Query: 105 AALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM 164 G+R ++E+ T +L+ ++ + + + E A+RL+ R A++ +A G Sbjct: 233 PVFGDRPVSEIDTAMVLSVLEPIWST-KAETASRLRGRIEAVLDWASVRGHRQGENPARW 291 Query: 165 AGAVAS--------CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSE 216 G + +H AL IP + + + G A+E +L R+ E Sbjct: 292 KGHLDKILPAKSKIARVEHHAALPFSTIPAFMRDLGTRPG--AAARALEFAILTAARTGE 349 Query: 217 LRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQ-- 274 + A+WSEIDFEA +WT P ER +K R H VPL A+AIL +++ Sbjct: 350 VIGAQWSEIDFEARLWTQPAER------------TKTRKEHRVPLCDAAMAILASMREAF 397 Query: 275 FYGAHD-----------------LIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHG 317 G + IF G +S + L MG+ ++ HG Sbjct: 398 LTGRREFLLLYNKPVPDDMPLEGFIFAGMRRGKG-LSNMAMLKTLERMGH---PDLTTHG 453 Query: 318 FRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 FR+ E+ + + VE ++H V AAY + + LE+RR +++ WA + Sbjct: 454 FRSTFRDWAAETTGYQNEVVEMALAHAIAGKVEAAY-RRGDLLEKRRDLMRDWAAYC 509 >UniRef50_B3R3M6 Prophage integrase n=4 Tax=Bacteria RepID=B3R3M6_CUPTR Length = 418 Score = 245 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 95/397 (23%), Positives = 176/397 (44%), Gaps = 35/397 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++ + +GS+ W ++ G+ + + LG ++LA AR + R LL +GVDP + + Sbjct: 29 LYFQISESGSRSWIFKFTLRGRSREMGLGPLASVSLAAARAEAAKCRDLLRDGVDPIEAR 88 Query: 61 KNDKVEQ----SKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 K + ++ S R FK A ++ ++ +E HA + ++ LG++++ + Sbjct: 89 KCKQRQRMLELSGPRLFKAAAADYIAKHRAGWKNEKHAQQWTNTIATYAAPILGDQDVRD 148 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQE---MAGAVAS 170 + T ++ ++ + + + E A RL+ R I+ G + NPA+ + + Sbjct: 149 IDTAMIVQVLQPIWIK-KRETAFRLRGRLECILDAEKALGHREGENPARWRGHLDKLLPK 207 Query: 171 CNRQ----HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 NR+ H PAL + IP + ++ G +E +L +R+ E++FAR E D Sbjct: 208 QNRRKKIKHHPALPWQEIPSFMKELREQRG--TAARMLEHLILTVVRTQEVQFARPEEFD 265 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 +WT+P ER KM VP++ + + +++ GA D Sbjct: 266 MRYRVWTVPGER------------MKMELPLRVPMTDRLVELVEA--ALPGARDGWLYPG 311 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 KP+S + L MGY V HGFR+ + + ++ E ++H + Sbjct: 312 RKKGKPLSNMAMLKLLERMGY---GHVTVHGFRSTFRDWVADCTEYADSLAEMALAHAIQ 368 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFIS 383 N AAY + + LE RR M++ WA + I Sbjct: 369 NESEAAY-RRGDMLERRRKMMRDWAHYCSGQAAAVIP 404 >UniRef50_D0SVD2 Predicted protein n=2 Tax=Acinetobacter RepID=D0SVD2_ACILW Length = 388 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 104/376 (27%), Positives = 173/376 (46%), Gaps = 28/376 (7%) Query: 1 MHLLVHPNGSKYWRLQYR-YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++ V NGSK W+ +Y+ GK +G YP I +ARV K + G Sbjct: 35 LYFFVKANGSKSWQFRYKKRNGKWGWKGVGAYPIIKAKEARVIASGYLKEIEAGTFL--- 91 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 +V++ K + E ++ KKWS + ++ S++ +++ G R++ +KT + Sbjct: 92 ----EVDKYKLSSLIESLLD--KKQKKWSPKNFSKMQLSIKKHIYPEFGNRDLRTIKTME 145 Query: 120 LLAPIKAVEMSGRLEV-AARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 +E ++ V +L +A NP +E+ G + Sbjct: 146 WYEFFARLEYDLKIPVQMRKLLSFAREAYDWACIYCEYKENPVREVQGFFERHKSGNFKF 205 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 ++L +P+LL+ I SY+ R T +EL LL+F R EL+ A+W + DF IW P E Sbjct: 206 VDLIELPDLLSAIRSYSSR-STAIGLELLLLLFPRPGELQQAKWEQFDFHRKIWIKPAEM 264 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K + H VPL QA+ +LK++K+ +F +D MS +T Sbjct: 265 ------------MKNKKEHRVPLPDQAIILLKRLKEIQTPSPYLFPLRNDPMMAMSVDTF 312 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 N AL +GY+ K HGFR +A ++L +E +SH+ + + Y KAE Sbjct: 313 NEALISLGYENKQH--PHGFRHLASTTLNNKFSDKYQIIESALSHV-KQGTKGIY-DKAE 368 Query: 359 HLEERRLMLQWWADFL 374 H +ER ++Q WAD++ Sbjct: 369 HFQERVDLMQGWADYV 384 >UniRef50_D1AZM1 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZM1_SULD5 Length = 416 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 98/388 (25%), Positives = 180/388 (46%), Gaps = 27/388 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + +L+HP+G K W Y K++ G YP+ TL +AR +R+ L+ G+DP D Sbjct: 32 LRILIHPDGRKIWEFVYTSPTLYKKRKSTFGTYPKTTLKEARDKRETYLNLIKQGIDPID 91 Query: 59 KKKNDKVEQ--SKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLED-NLFAALGERNIAEL 115 ++ +K E K F V W + + ++ ++L D + L ++IAE+ Sbjct: 92 AQREEKAEVKLQKESDFSNVVNLWFQSQESHIVHSTYKKKRALFDTTVIPVLKHKSIAEI 151 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM--AGAVASCNR 173 K +L+ IK ++ E A RL + ++A G D+N + + + Sbjct: 152 KHDELVQIIK-IKAIQTPETAKRLLGYFHDLWQFACTHGYCDFNIVPNIHAKSVLPKIVK 210 Query: 174 QHRPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 +H + + +L+ I +Y G T+ A++ L + +R+ L +W+ +DFE + Sbjct: 211 KHYACITDPSILKQLVNSIYTYGGHISTKNALKFVLHVPLRAGNLVSLKWAYVDFEKHLI 270 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 TIP +K ++PLS +A+AIL++ + + +F+ D+ Sbjct: 271 TIP----------RKEMKAKSGDDFILPLSDEAIAILQEQYLYTSHKEFVFVA--DNGLH 318 Query: 293 MSENTVNSALRVMGYDTKV---EVCGHGFRTMACSSL---VESGLWSRDAVERQMSHMAR 346 + E T + AL+ MG++ + + H FR S + S +A E+ + H+ Sbjct: 319 IDEVTPSRALQRMGFNNETLGNKQRLHSFRATFRSLVDTHQMEHRSSYEAKEKVLDHIVG 378 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFL 374 + V AY KA + EE RL+L WW+ ++ Sbjct: 379 SGVERAYTQKAIYTEEMRLLLTWWSGYI 406 >UniRef50_A6U968 Phage integrase family protein n=2 Tax=Rhizobiales RepID=A6U968_SINMW Length = 391 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 94/388 (24%), Positives = 178/388 (45%), Gaps = 34/388 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYP----EITLADARVRRDEARKLLANGVDP 56 + L +G++++ Y G+++ + LG Y +++LA AR + +E R +L G DP Sbjct: 25 LWLHTSSSGNRHFVFIYIRHGRRREMGLGTYGTGTGQVSLAAARTKAEEIRTILGRGGDP 84 Query: 57 GDKKKNDKVEQSKARTFKEVAIEWH-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + ++ E+ K TF + A + +W + + A+ + +AE+ Sbjct: 85 FTE-MGERQEKVKPTTFGQCADDLVDAMESQWRNEKHRAQWRMTLTEYAKAIRKLPVAEV 143 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQE------MAGAV 168 T D++ +K + + + E A+RL+ R ++ +A GL NPA+ + Sbjct: 144 TTDDVVRVLKPIWST-KAETASRLRGRIEKVLDHAKVRGLRTGENPARWKGHLDHILPKA 202 Query: 169 ASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 R H A+ +P + KI +G + A+E T+L R+ E A+W+E DF Sbjct: 203 GKLKRGHHAAMPYADVPAFIKKIREASG--VGARALEFTILTASRTGETMGAKWAEFDFR 260 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD 288 ++WT+P ER K H VPL+ + LA+L ++K+ +D +F G Sbjct: 261 ENVWTVPAER------------MKGGREHRVPLTDRVLAVLTEMKK-RSVNDFVFPGS-K 306 Query: 289 SHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 ++ P+S T+ ++ D HGFR+ E + + E ++H+ + Sbjct: 307 ANTPISNMTMTKVMKTYEADA---FTVHGFRSAFRDWASEETEFQGEVAEAALAHITGDE 363 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDV 376 AY + + LE+RR +++ W + +V Sbjct: 364 TERAY-RRGDVLEKRRKLMEAWETYCEV 390 >UniRef50_B8IIS8 Integrase family protein n=9 Tax=Alphaproteobacteria RepID=B8IIS8_METNO Length = 420 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 105/402 (26%), Positives = 176/402 (43%), Gaps = 32/402 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V P G K W YR G+++ + LG + LA AR EAR +A GVDP D + Sbjct: 40 LYLVVDPAGGKRWVFLYRMAGRRREMGLGPVLSVPLARARELAAEARAQVAGGVDPIDAR 99 Query: 61 KNDKVEQSKAR--TFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + ++ TF EVA + ++ W R + + A+L +A++ T Sbjct: 100 RAPPSDEPPPHRITFAEVAEVYMTDRERAWRNAAHRRQWRQTLEVQAASLWAMPVADVNT 159 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE------MAGAVAS 170 +LA ++ + S + E A RL+ R I+ A +G NPA+ + Sbjct: 160 EAVLAVLRPIWHS-KAETARRLRGRIERILDAARVAGHRGPENPARWKGHLDVLLPRAGK 218 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 R H AL +P + +I T A+EL +L RS E+R W+E+D + Sbjct: 219 LQRGHHNALPYMEVPAFVAEIRQREA--QTARALELLILTAARSGEVRGMTWAEVDLVGA 276 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIK-QFYGAHDLIFIGDHDS 289 +WT+P ER K + H VPL +A+ IL ++ + A LIF +D Sbjct: 277 LWTVPKER------------MKAKRPHRVPLCARAVEILSKLHLEAPDAEGLIFPSRND- 323 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 +S+ + LR Y ++ HGFR+ + R+ +E ++HM ++ Sbjct: 324 -TVLSDMVFAALLRRAKY---PDITAHGFRSSFRDWAADETDHPREVIEAALAHMVGDAT 379 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYAKIN 391 AY + + L +RRL++ W ++ P + Sbjct: 380 ERAY-RRGDALAKRRLLMDDWGAYVCGGASAAEPPMSATRSP 420 >UniRef50_C5V760 Integrase family protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V760_9PROT Length = 384 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 97/379 (25%), Positives = 180/379 (47%), Gaps = 33/379 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +H+ + G+K +R + + +GK K++ LG + +TL AR R + + NG+DP + Sbjct: 29 LHVHISVVGTKTFRFKTKLDGKAKIIKLGDFKHMTLEQARQRAFDLNVQIQNGIDPTVQ- 87 Query: 61 KNDKVEQSKARTFKEVAIE---WHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +TF EV+ E W +E + + L+++L A +I E+ T Sbjct: 88 -----IVPEFKTFAEVSKEFVAWKRDEFGRAEGTIRKYQECLDNDLLPAFANTSIKEIHT 142 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++ +A I+ + +A + + ++ +A+Q G D ++G + + P Sbjct: 143 KESVAVIEKINARSN-SLAIKNIEMLNMVVMFAIQRGYRDSYTQLNLSGLIKEKPVK--P 199 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + + + KID Y + R AI + +F+R SE+ RW EIDFE W +P + Sbjct: 200 KIMPSSLKDTFDKIDQYP-TFIMRCAITIQFHVFLRGSEIMGGRWEEIDFEKKQWVVPAD 258 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R KM+ TH+VPL++Q + +L ++K G +F + + + Sbjct: 259 R------------MKMKRTHIVPLTSQTIELLTKLKSATGDSAFLFPSSKSV-EHIGRDA 305 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 ++ A R +++ HG RT+A + + + + VE Q+SH N + AAY + Sbjct: 306 LSKAFR----AADLKIVPHGCRTLAGTWMRNNK-YLPHLVETQLSHCESNQIAAAYQTEP 360 Query: 358 E--HLEERRLMLQWWADFL 374 +L+ERR M+Q W++ L Sbjct: 361 HMLYLDERRGMMQEWSNHL 379 >UniRef50_B0UGI0 Integrase family protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UGI0_METS4 Length = 413 Score = 243 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 90/403 (22%), Positives = 155/403 (38%), Gaps = 46/403 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP---- 56 ++L+V P+G K W ++YR + + +G YP L+ AR R +A ++ A G+DP Sbjct: 28 LYLIVQPSGKKSWAIRYRINRQPRKFTIGPYPLFDLSAARERARQALQMAARGLDPYREK 87 Query: 57 GDKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 + + + +E H K +A + L +++ G R I ++ Sbjct: 88 KAAEAAAIEAKDQVSRVVATYVERH-LKVKGKPGYAEQAEGLLRNHVLPHWGHRRIGDIG 146 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 D++A + + G A R+ T A+ +A+ LI P + + + +R Sbjct: 147 RADVIALVDGLTDRGMTTGANRVFATTRALFNFALGRDLITSTPFLGLKPPLPNPSRDRV 206 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 + R L + + P+ +L LL R +E WSE+D ++WTIP Sbjct: 207 LSDAEVRWAWLCAERIGFPFGPMV----QLLLLTGTRRNETGEMVWSELD--GTVWTIPG 260 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 R +K H+VPL A+ IL + + G +F + P S+ Sbjct: 261 AR------------TKNSLEHVVPLPPAAIEILAAVPRIAGRPGYVF--TRNGSTPASDL 306 Query: 297 TVNS--------------ALRVMGYDTK----VEVCGHGFRTMACSSLVESGLWSRDAVE 338 + A R G D K H R A S + G VE Sbjct: 307 SAGKRRLEAAMLTVAQSEAARR-GEDPKAVTIPRWTLHDLRRTAASGMARLG-TDPHVVE 364 Query: 339 RQMSHMARN-SVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 ++H + S AA ++ +L E+R L+ W + Sbjct: 365 AVLNHRSGTISGVAAVYNRYAYLNEKRAALETWGKHVTSLAND 407 >UniRef50_D2LD60 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD60_RHOVA Length = 427 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 94/384 (24%), Positives = 149/384 (38%), Gaps = 28/384 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++ + P+G+K W ++YR G+ + L LG YP I L AR A +A G DP K Sbjct: 30 LYFVHQPSGAKSWAVRYRVGGQTRKLTLGTYPAIGLKPARDLASTALAAVARGEDPAKAK 89 Query: 61 KNDKVEQSKART---FKEVAIEWHG--TNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K K ++ A + VA + + +K E H + L+ + R + ++ Sbjct: 90 KAAKEKEKAAPARDFVEAVAASFIERHSKQKNKETHIRETERILQREIVPVWKGRKLGDI 149 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 D+ + A+ G +A R + +AV I +P + + +R Sbjct: 150 TRADVHEVLDAIVNRGCPTMANRTLSTVRKMCAWAVDRSFIAVSPCHGIKAPASEKSRDR 209 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 + + R L + + PL + L L R E+ RWSEIDF+ IWTIP Sbjct: 210 LLSEDEMRAAWLAFEATGWPFGPLAK----LLLATAQRRDEVADMRWSEIDFKTRIWTIP 265 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD---SHKP 292 R SK H VPLS ALAIL + G D +F S Sbjct: 266 AAR------------SKNGQAHEVPLSEAALAILDGLPHVAGVSDYVFTTTGKTPVSGFS 313 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR--NSVR 350 ++ + + + H R A S + V+ ++H + V Sbjct: 314 RAKKAFDEQITRQLGEGIPGWTLHDLRRTAASGMTALKS-PPHVVDAVLNHKSGTIKGVS 372 Query: 351 AAYIHKAEHLEERRLMLQWWADFL 374 A Y+ + + E+R L W FL Sbjct: 373 AVYM-RYGYAAEKRTALDAWGHFL 395 >UniRef50_B2TTV9 Site-specific recombinase, phage integrase family n=25 Tax=Proteobacteria RepID=B2TTV9_SHIB3 Length = 439 Score = 243 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 85/406 (20%), Positives = 161/406 (39%), Gaps = 33/406 (8%) Query: 1 MHLLVH-PNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L + + WR +Y+ GK + + +G Y E++L+ AR E +A G D + Sbjct: 48 LYLRYREADKTPTWRFRYKLAGKSRAMLIGSYSELSLSKARETAKELSARVALGYDVAGE 107 Query: 60 KKNDKVE-------QSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNI 112 K+ K E + A E+A E+ H + + ++ ++ +G + Sbjct: 108 KQKHKTEALAKMEAEKNAMRVSELAAEYFERQILPRWKHPDILRRRIDKDINPCIGSMKV 167 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 ++K R + +K + G +A + + T I Y ++ ++ NP A A Sbjct: 168 EDVKPRHIDDMLKGIVDRGAPTIATDVLRWTRRIFDYGIKRHALEINPCSAFEVADAGGK 227 Query: 173 R-QHRPALELKRIPELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 L + +L + + G +L L + +R EL ARW E D + + Sbjct: 228 EAARDRWLTRDELIQLFKAMRTAKGFSRQNEITFKLLLALCVRKMELCAARWEEFDLDGA 287 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +W +P ER SK +PL + A+ L+++ F + + Sbjct: 288 VWHLPEER------------SKNGDPIDIPLPSPAVEWLRELHTFSCNSAWVLPARKMQN 335 Query: 291 ---KPMSENTVNSALR--VMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 + E+T+ AL H FR A + L G+ ER ++H Sbjct: 336 RMIPHIQESTLPVALAKVRAEMPDVPNFTIHDFRRTARTHLAALGV-DPVVAERCLNHRI 394 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADF---LDVNRERFISPFEYA 388 + V Y ++ ++ +ER+ L WAD L+ ++ ++P A Sbjct: 395 KG-VEGIY-NRHQYFDERKAALAQWADLLVALESGKDYNVTPLRRA 438 >UniRef50_B6JEM3 Phage integrase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JEM3_OLICO Length = 390 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 99/390 (25%), Positives = 164/390 (42%), Gaps = 37/390 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE----ITLADARVRRDEARKLLANGVDP 56 + + V GS+ W YR ++ + LG Y + ++L AR + D R+ LA G DP Sbjct: 26 LFIRVQKTGSRNWLFVYRRGQQRNEIGLGGYGQGTAPVSLPLAREKADAIRQQLARGEDP 85 Query: 57 GDKKKNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + K + TF EV + + W+ K L +A++ Sbjct: 86 RASRNAIKPK-----TFGEVMEQLLTAKESEWTNPKHAEQWKMTLRTYAKPLHRLPVADI 140 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQE------MAGAV 168 D+ I R E AARL+ R A++ YA+ NPA+ + Sbjct: 141 VMGDVKDCILPHWAE-RPETAARLRSRIQAVIDYAIAHEWRSAGNPARWGGLLEKVMPKR 199 Query: 169 ASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 +R H AL P+ + + +G A+E L RS E R++ ++E+D + Sbjct: 200 QKLSRGHHAALAYADAPQTIEALRHSSGTA--ARAVEFIALTVARSGEARYSTFAEVDVK 257 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD 288 A WT+P ER K H+VPL+ +AL I++ ++Q D IF G D Sbjct: 258 AKTWTVPAER------------MKAGKEHIVPLTARALQIVEAMRQRATG-DYIFGGAQD 304 Query: 289 SHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 S P+S+ + ALR+ D HG R+ + + RD E ++H + Sbjct: 305 SK-PISDTAMVKALRLASPDKAA--TLHGLRSTFRDWAGDKTKFPRDIAEMALAHAVGDE 361 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVNR 378 AY ++ L +RR ++ W +L+ ++ Sbjct: 362 TERAY-RRSTALAQRRKLMDAWERYLNTDK 390 >UniRef50_B2U8E1 Integrase family protein n=9 Tax=Proteobacteria RepID=B2U8E1_RALPJ Length = 417 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 92/397 (23%), Positives = 176/397 (44%), Gaps = 35/397 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +H + GS+ W ++ G+ + + LG ++LA AR + R LL G+DP + + Sbjct: 29 LHFQISATGSRSWIFKFTLRGRSREMGLGPLSSVSLAAARAEAAKCRDLLREGIDPIEAR 88 Query: 61 KNDKVEQSKART----FKEVAIEWHGTNKKWSE--DHAHRVLKSLEDNLFAALGERNIAE 114 ++ +++ + F+ + ++ ++ + HA + +L LG++++ + Sbjct: 89 NAEQRKRALETSGPRLFRVASADYISQHRAGWKNAKHAQQWENTLATYANPILGDQDVRD 148 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQE---MAGAVAS 170 + T ++ ++ + +S + E A RL+ R I+ G + NPA+ + + Sbjct: 149 VDTAMIVRVLQPIWIS-KRETAFRLRGRLECILDAEKALGHREGENPARWRGHLDKLLPK 207 Query: 171 CNRQ----HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 NR+ H PAL + +PE + ++ + T +E +L +R+ E+ +AR E Sbjct: 208 QNRRKKIKHHPALPWQELPEFMRELRAVADS--TARMLEHLILTAVRTQEVLYARPEEFA 265 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 + +WT+P ER KM VP++ + + ++ + GA D Sbjct: 266 MDYRVWTVPGER------------MKMELPLRVPMADRLVELVTE--AMKGARDGWLYPG 311 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 KP S + L MGY + HGFR+ + E ++ E+ ++H + Sbjct: 312 RKKGKPYSNMAMLKVLERMGY---GHITVHGFRSTFRDWVAECTEYADSLAEKALAHAIQ 368 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFIS 383 N AAY + + LE RR M+ WA F R IS Sbjct: 369 NESEAAY-RRGDMLERRRKMMSDWARFCSGERAAIIS 404 >UniRef50_B9KC61 Site-specific recombinase, phage integrase family n=5 Tax=Campylobacter RepID=B9KC61_CAMLR Length = 392 Score = 240 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 94/389 (24%), Positives = 173/389 (44%), Gaps = 41/389 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V+P+G K ++ + + + LG YP ++LA+ R + KL A G + + K Sbjct: 34 LYVFVYPSGRKLFKTR---QANDTYITLGEYPLLSLAELREIAINSHKLKAKGQNISNAK 90 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLK--SLEDNLFAALGERNIAELKTR 118 + F + E +K S A + + S ++ +F +L +NI ++K Sbjct: 91 RLK---------FGVLYDEVLENARK-SNLAAKTIQRGLSYKEGIFKSLEYKNINDIKRV 140 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ---H 175 D++ +K +E + + + YA+Q +I+ NP + + H Sbjct: 141 DIVNILKTIEHKSA--TLQKAKIWINKVFEYALQLEIIENNPVASIKNNIVFKKPNQVIH 198 Query: 176 RPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 +P L + I E + + + + + LL R + A W EIDF+ IWTI Sbjct: 199 QPTLLDESDIKEYINTLIHSDIKQSHKNLMLFVLLTAQRPGNVIKATWDEIDFKNEIWTI 258 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 ++ KMR H + LS QA++ILK +D +F G S Sbjct: 259 SAQK------------MKMRKEHNIALSKQAISILKNQYAI-KVNDYVFAGSSKKG-CNS 304 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVE---SGLWSRDAVERQMSHMARNSVRA 351 EN + + +GY K HGFR M S E S D E+ ++H +N++ Sbjct: 305 ENITCNTNKRLGY--KGIQSAHGFRAMFRSIANEKQLEHGVSMDIAEQCLAHEQKNAILK 362 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRER 380 AY ++++++E +R+++QWW D+++ + Sbjct: 363 AY-NRSKNIELKRILMQWWGDYIEKLAGK 390 >UniRef50_Q1YTS1 Putative phage integrase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTS1_9GAMM Length = 429 Score = 240 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 92/419 (21%), Positives = 178/419 (42%), Gaps = 51/419 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEI--TLADARVRRDEARKLLANGVDPGD 58 ++ + +G+ + ++Y+ GK +G Y ++ L AR + + R + G+DP Sbjct: 28 LYFTIKHSGAMSFGIRYQINGKTDYKGMGGYDKVHNNLGIARAKCEAYRVQIRQGIDPKI 87 Query: 59 KKKND---------KVEQSKARTFKEVAIEWHGT-NKKWSE-DHAHRVLKSLEDNLFAAL 107 +++ +Q K RTF + A + + W+ + SLE F + Sbjct: 88 EEQQALNLKQSAKAAEDQLKDRTFAKYAYQHIKSLEPSWTNVKTFAQWRSSLEQYAFPVI 147 Query: 108 GERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLI-DYNPAQE--- 163 GE ++++ +L ++ + + E A R+++R AI+ A+ L + NPA Sbjct: 148 GETPVSDVSRTQVLEILQPIW-FDKTETADRVRRRIAAILDAAISDDLRTERNPAIWRGS 206 Query: 164 ----------MAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIR 213 + A A + +L +P + + + G + A+E +L R Sbjct: 207 LHGKLPSVETLKKAKAPTEERAHASLHYAHLPMFMESLRAQDG--IGARALEFCILNASR 264 Query: 214 SSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIK 273 ++E+ A W E D E IW+IP R K R H +PLSTQ++A++KQ+K Sbjct: 265 TTEVLDATWGEFDLEEGIWSIPARR------------MKGRERHNIPLSTQSIALIKQLK 312 Query: 274 QFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVE------VCGHGFRTMACSSLV 327 Q D +F + + K +S+ ++S L+ M + + HGFR + Sbjct: 313 QL-KMSDFVFP-NRSNGKSLSQAGMSSVLKRMNKINDWKDIHGQLITVHGFRGCFKTWTT 370 Query: 328 ESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFE 386 E E ++H ++ A Y K + +++RR ++Q ++D+ + Sbjct: 371 EKTDTDWLTGEMALAHKIKDKSSATY-QKGDLIDKRRRLMQKYSDYACTTPSGKVVQLR 428 >UniRef50_C3MAV8 DNA integration/recombination/invertion protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MAV8_RHISN Length = 429 Score = 240 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 83/399 (20%), Positives = 160/399 (40%), Gaps = 44/399 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V G K W ++YR+ GK + + LG +P I+L+DAR +A ++++ G DP +K Sbjct: 32 LYLIVQTTGVKSWAVRYRHAGKPRKMTLGGFPAISLSDAREEARKALRMVSEGRDPATEK 91 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNK---KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + ++ ++ T K + + +E NL ++ + + Sbjct: 92 AEQEPKRPAHMDLMPALLDEFVTRHVAVKNRPSYVRESKRIVEKNLKPKWKQKLVKTVTK 151 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 RD+L + + G +A R++ + +A++ ++D +P + R Sbjct: 152 RDVLKLLDEIVDRGSPIMANRVRALLSKFFAWAMERDIVDASPVVSIKAPSEEKTRDRIL 211 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS--IWTIP 235 E R L + +Y P+ + L LL R +E+ A W E++ E + +W I Sbjct: 212 TDEEIRFLWLAAEKLAYPFGPVVK----LLLLTAQRRTEVSDALWDELELEGNNQLWVIS 267 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD------LIFIGDHDS 289 +R +K + H VPL+ AL I++ + + A D +F + Sbjct: 268 VDR------------AKNKKEHFVPLTASALEIIEGLPKIKPAEDEKAKPIYLFTTTGKT 315 Query: 290 HKPMSENTVNS------ALRVMGYDTKVE---------VCGHGFRTMACSSLVESGLWSR 334 A+ + + E H R A S + + Sbjct: 316 PVSGFSKAKTQLDGEMLAIARKEAEERGEDPEGISIEPWTYHDLRRTAASGMARLSV-PV 374 Query: 335 DAVERQMSHMARN-SVRAAYIHKAEHLEERRLMLQWWAD 372 VE ++H + + AA ++ ++ EE+R L WAD Sbjct: 375 HIVEAVLNHRSGSIKGVAAVYNRYDYAEEKRAALTAWAD 413 >UniRef50_B3AX37 Site-specific recombinase, phage integrase family n=7 Tax=Enterobacteriaceae RepID=B3AX37_ECO57 Length = 440 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 82/395 (20%), Positives = 153/395 (38%), Gaps = 32/395 (8%) Query: 12 YWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVE----- 66 +WR +Y++ GKQ+ + +G Y E++L+ AR E +A G D +K+ K E Sbjct: 60 FWRFRYKFAGKQRAMVIGSYAELSLSRARETAKELSARVALGYDVAAEKQERKAEALAKM 119 Query: 67 --QSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPI 124 + A E+A E+ H + + ++ ++ +G ++K R + + Sbjct: 120 EAEKNAIRVSELAAEYFERQILPRWKHPDILRRRIDKDINPRIGHMKAEDVKPRHIDEML 179 Query: 125 KAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA-GAVASCNRQHRPALELKR 183 KA+ G +A + + T I Y ++ +++ NP L + Sbjct: 180 KAIVDRGAPTIATDVLRWTRRIFDYGIKRHVLEINPCSAFEVSDAGGKESSRDRWLTREE 239 Query: 184 IPELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIP 242 + + + G +L L + +R EL ARW E D + ++W +P ER Sbjct: 240 LIRFFQAMRTAKGFSRQNELTFKLLLALCVRKMELCAARWEEFDLDNAVWHLPEER---- 295 Query: 243 GVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH---KPMSENTVN 299 SK +PL + LK+++ + H + E+T+ Sbjct: 296 --------SKNGDPIDIPLVPPVIEWLKELRVLSCNSAWVLPARKMQHRMIPHIQESTLP 347 Query: 300 SALR--VMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 AL + H FR A + L G+ ER ++H + V Y ++ Sbjct: 348 VALAKVRAEMPEVPDFTIHDFRRTARTHLAALGV-DPVVAERCLNHRIKG-VEGIY-NRY 404 Query: 358 EHLEERRLMLQWWADF---LDVNRERFISPFEYAK 389 ++ +ER L W + L+ ++P AK Sbjct: 405 QYFDERTSALAKWTNLLVSLERGERYNVTPIRRAK 439 >UniRef50_A3VAJ4 Site-specific recombinase, phage integrase family protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAJ4_9RHOB Length = 392 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 84/377 (22%), Positives = 155/377 (41%), Gaps = 28/377 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +H+ V G+K + R G ++ + +G YP ++LADAR R E +A V+ G+ + Sbjct: 37 LHVRVSTTGAKVFYTLVRPNGSRRRIKIGPYPVVSLADARRRAME----IARDVELGEFE 92 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 K +V ++ A T E+ ++ + K + R L F L +R I +++ +D+ Sbjct: 93 KTPEVPEASADTLGEMIPKFIELHAKPNTKDWKRTESVLHK--FDGLKDRPIDQIRRQDV 150 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + + +G A R +M + V G I+ +P + R + Sbjct: 151 SKVLDGIIANGTPTRANRALSAIKKLMNWCVMRGDIETSPVALLRPPTREVQRDRVLSDA 210 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 R + + Y P ++L L+ R SE+ RWSE++ + IW +P R Sbjct: 211 EIRAIWQHSDAEDYPFGP----FLKLLLISGQRRSEVAGMRWSELNLDEGIWELPANRV- 265 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 K H+VPL QA+ IL+ + +F D +F + Sbjct: 266 -----------KNARLHIVPLPVQAVDILRGLHRFL-DSDFVF-TTTGRSAISGFGRLKE 312 Query: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR--NSVRAAYIHKAE 358 + + + H FR A + + + G+ ++ +H + + V A Y ++ Sbjct: 313 RVDTALPEGTPDWRFHDFRRTASTGMAKLGVMP-HVIDAVTNHKSGVVSGVGATY-NRYT 370 Query: 359 HLEERRLMLQWWADFLD 375 + E+R L WA +D Sbjct: 371 YFNEKREALAQWAAHID 387 >UniRef50_A1WQF8 Phage integrase family protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQF8_VEREI Length = 419 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 85/381 (22%), Positives = 163/381 (42%), Gaps = 28/381 (7%) Query: 8 NGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQ 67 G W L+YR+ G + LG YP+++L DAR + R + GVD +K+ ++++ Sbjct: 40 KGQASWILRYRFGGGAREKVLGRYPDLSLKDAREATRQNRARIQQGVDVAAEKRAERLKA 99 Query: 68 SKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAV 127 + +A W+ + + H VL+ + ++ A+G+ + E++ + + + Sbjct: 100 HEQVAVAALAQAWYDRHIAKTYKHPEVVLRVIRRHIEPAIGKLGVTEVRPLHIDKVLTRI 159 Query: 128 EMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC-NRQHRPALELKRIPE 186 +G VA + + +AV+ ID NP + A + L + + Sbjct: 160 LDAGTPTVANDALRHLFRMFHFAVKRRWIDANPVSGFEISDAGGFEVSRQRWLNREELAA 219 Query: 187 LLTKI-DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVK 245 + D+ A+ L L + +R EL ARW+E D E +W++ P R Sbjct: 220 FAKAMQDTPNFGRQNELAVWLLLALCVRKMELLSARWTEFDLERGVWSLHPSR------- 272 Query: 246 HSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI-----------GDHDSHKPMS 294 +KM + +PL+ L L++++ F + +F + +S Sbjct: 273 -----TKMNQSIDIPLAAPVLRWLEEVQVFSCNSEYLFPPRRLIHMKGGVPRRNRFGHIS 327 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 +T+N AL + D H R A + + G+ R ER ++H R+ V Y Sbjct: 328 PDTLNVALLRLPLDDIEHFTVHDMRRTARTHMAALGV-DRFVAERALNHKVRD-VEGVY- 384 Query: 355 HKAEHLEERRLMLQWWADFLD 375 ++ ++ +ER++ L WA L+ Sbjct: 385 NQYDYFDERKVALDRWAQLLE 405 >UniRef50_A1AQ50 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQ50_PELPD Length = 427 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 89/398 (22%), Positives = 163/398 (40%), Gaps = 48/398 (12%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLAL--GVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + V+P+G K W Y ++G++K + L G YP+++LADAR D A+ L NG+DP + Sbjct: 32 IRVYPSGEKAWYFIYTFDGRKKYMRLKDGGYPDVSLADAREAFDIAKVKLKNGIDPLAEL 91 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + ++++ KE E+ K + + ++L+ + G+R + ++K RDL Sbjct: 92 EQARLDRKHTPFVKEFVDEFIRIYCKENNRGWKEIERALKSEIVPRWGKRKLTDIKRRDL 151 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + + ++ G +A R+ T + +A++ ++ NP M+ +R+ L Sbjct: 152 VLVLDEIKERGAPVMANRILAYTRKMFSWALERAALEVNPFLMMSRPNDETSRER--VLS 209 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 K I +D + A++L L+ R E+ +EID W IP R Sbjct: 210 EKEIKTFWHNLDECKMSDSIKRALKLILVTGQRPGEIIGMHRNEID--GEWWEIPAAR-- 265 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 SK + H V L+ A ++ A IF + KP E Sbjct: 266 ----------SKNKQAHRVFLTITAKQLI------GDASGFIFESPANPAKP-DETPPKP 308 Query: 301 A----LRVMGYDTK-----------------VEVCGHGFRTMACSSLVESGLWSRDAVER 339 A +R M +D K H R A + E + + D ++R Sbjct: 309 AKPYEVRTMTHDIKQNLPHTPHSKVIDRLKVPHFTPHDLRRTAATRWAEMEI-TGDMIDR 367 Query: 340 QMSHMARNSVRAAY-IHKAEHLEERRLMLQWWADFLDV 376 +H+ R + ++ + E++ L+ W L+ Sbjct: 368 LQNHITRQKQGVGHVYNRYSYAREKQQALEAWEQKLNS 405 >UniRef50_A5UG79 Prophage integrase n=1 Tax=Haemophilus influenzae PittGG RepID=A5UG79_HAEIG Length = 339 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 97/350 (27%), Positives = 164/350 (46%), Gaps = 22/350 (6%) Query: 26 LALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKARTFKEVAIEWHGTN- 84 ++LG +P+++LA AR E R L+ +DP + + + +E+ K TF E+AI W Sbjct: 1 MSLGAFPDLSLAYAREIATEYRGLILRNIDPLEYRNSSNIEEKKT-TFAEMAIRWRDKRL 59 Query: 85 --KKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQR 142 K + + + +E +LF + + I + + L + ++ S ++ Sbjct: 60 KLGKLKPETVNDAFRRVELHLFPKIADLPIDQANYKTLEPVLSPLKNSN---TLYKINIA 116 Query: 143 TTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRW 202 I R A LI NP +++ ++ P L + +P L + T Sbjct: 117 INQIFRMAEDEDLIVKNPFRKIHDEFTYVETKNHPTLAPEELPRLFEVMQGANLEKPTAL 176 Query: 203 AIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLS 262 IE LL +RSSE W++ID++A IP ER + +H VPLS Sbjct: 177 LIEWQLLSILRSSEAVSIEWADIDWDAKALHIPAERMKGG-----------KRSHSVPLS 225 Query: 263 TQALAILKQIKQFYGAHDLIFIGDHDS-HKPMSENTVNSALRVMGYDTKVEVCGHGFRTM 321 QAL IL+Q++++ G +F ++PM+ N AL+ MG+ K + HG R++ Sbjct: 226 RQALNILEQMRRYNGNRKYVFCSRIAPYNRPMNSGAANVALKRMGF--KGLLVAHGLRSI 283 Query: 322 ACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWA 371 A + L E +S +A+E +SH R VRAAY K++ R+ ++Q W Sbjct: 284 ASTYLHELDRFSSEAIELCLSHENRGKVRAAY-DKSKKWRSRQEIMQTWG 332 >UniRef50_A7MTK6 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7MTK6_VIBHB Length = 290 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 77/286 (26%), Positives = 132/286 (46%), Gaps = 15/286 (5%) Query: 89 EDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMR 148 + A + L +++ LG+ + E++ + ++ +E G+LE R IM Sbjct: 5 QKTAEGYRQKLNLHIYPKLGDVPVKEIRASMWIDAMRPLERKGKLETVVRTTALFRRIMN 64 Query: 149 YAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTL 208 +AV + I NP M R + +++K +P LLT + T RP + E L Sbjct: 65 FAVNNDYIHNNPIGSMRDVFKKPKRGNFSCIDIKELPTLLTMVVQSTMRPANKLLFEFQL 124 Query: 209 LIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAI 268 RS+E ARW E FE +W +P ER +K R H +P++ + ++I Sbjct: 125 HTLTRSNEATGARWEEFSFEEKVWYLPAER------------AKNRLMHKIPMTPEVISI 172 Query: 269 LKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVE 328 LK K + +F KP+ T+N+A + +G K + HG R++ + L E Sbjct: 173 LKAAKSLSSGSEYVFPSRTSLKKPVHSETINAAFKRLGLSGK--MTSHGTRSLGSTILYE 230 Query: 329 SGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 + +E +SH R+ VR AY ++ + E+RR L+WW+ + Sbjct: 231 RTDFESVVIEAVLSHTDRDGVRDAY-NRNKFFEKRRAALEWWSKHI 275 >UniRef50_D1UFB2 Integrase family protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UFB2_9BURK Length = 431 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 94/381 (24%), Positives = 170/381 (44%), Gaps = 20/381 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKML-ALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 + + V G+K WR +Y GK++ L +G Y I+L AR + + +L+A G+ P Sbjct: 59 LVIEVMTTGTKVWRFRYSLNGKRQPLATIGDYRMISLRVARAKAQKYAELVAQGISPVAT 118 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + D+ ++KA +E A + T S+++ ++L+ ++ A+G + + + Sbjct: 119 ARRDRGAEAKADVLREAAELYMATEMAGKSDEYRRTTRRALDKDVLPAIGGLPVKSVTAQ 178 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 ++A +++ G ++A + + Y + L NPAQ + + Sbjct: 179 HVVAICDSIKSRGSPKMALHTRNVIKRLYEYLIARQLATANPAQVVPARSIATFESRTRV 238 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L I L ID+ + R + A+ L +L +R S+L + W E D E + W IP R Sbjct: 239 LSGDEIGATLHAIDTSSIRRPLKIALHLLVLTMVRKSDLVESTWEEFDLEKASWRIPAAR 298 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K LV L QA+ +L+++ + A +F +P++++T+ Sbjct: 299 L------------KQDADQLVYLPQQAVTLLRELHRARAATRFVFPSVRGDDRPIAKSTL 346 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 N A++ +G D + H FR A L E +R A E + S R R ++ A Sbjct: 347 NQAVKALGLDVE-HFVLHDFRRTASVHLREM---ARHAQEDKSSAQTRQHAR--HVEAAS 400 Query: 359 HLEERRLMLQWWADFLDVNRE 379 E R + Q WADF+D + Sbjct: 401 AAAEARQIAQRWADFVDARLD 421 >UniRef50_Q7V8P5 Phage integrase n=3 Tax=Cyanobacteria RepID=Q7V8P5_PROMM Length = 422 Score = 236 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 105/405 (25%), Positives = 177/405 (43%), Gaps = 46/405 (11%) Query: 1 MHLLVHP---NGSKYWRLQYRYEGKQKMLALGVYPE----ITLADARVRRDEARKLLAN- 52 +++LV P +G K + + R GKQ + +GV+ + TL AR R Sbjct: 26 LYVLVEPVKGSGGKSFVGKMRSNGKQIDVRIGVFGKGPGQWTLKAARDEWFRLRSWYRET 85 Query: 53 GVDPGDKKKNDKV---EQSKARTFKEVAIEWH---GTNKKWSEDHAHRVLKSLEDNLFAA 106 G DP + +K++K +QS +T E+ + T K SE L + + A Sbjct: 86 GRDPRELQKDEKRQLAKQSSDQTLNELVDSYLIACKTKYKQSETTIKDKKNKLSNEIIPA 145 Query: 107 LG-----------ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL 155 LG E++ + ++E G L A ++ + YA++ G Sbjct: 146 LGGSTPVSRLGWDEKSKGRTGREAVFEITDSIEKRGSLNQARKVLGVMRHLFDYAIERGW 205 Query: 156 IDY--NPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSY--TGRPLTRWAIELTLLIF 211 ++ NPA + A QH P L +P+LL ++ G + AI+L L+ F Sbjct: 206 MERGQNPAVQARSVGAGHEVQHNPCLSWDELPQLLDDLNRNKGNGSQVVLAAIKLDLMTF 265 Query: 212 IRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQ 271 +R L RW E+D+ A++WT+P R K H VPL+ +L Sbjct: 266 LRVGSLVPMRWDEVDYAANLWTVPGSR------------MKSGKNHWVPLTDPIKDLLAH 313 Query: 272 IKQFYGAHDLIFIGDHDSHKP-MSENTVNSALR-VMGYDTKVEVCGHGFRTMACSSLVES 329 +++ G D +F KP + E+ +N L+ +GY + HG R++ ++ E Sbjct: 314 LRKINGDQDYVFWSPRGRSKPHIDESALNQHLKVRLGYGGR--QTAHGLRSLPLTAGQEV 371 Query: 330 GLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 +S + ++RQM H + VR AY K++ L+ER ++ W D L Sbjct: 372 LKFSAEVIQRQMDHAVGDKVRQAY-DKSQLLDERWKFMRAWCDAL 415 >UniRef50_UPI00019779C7 integrase n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI00019779C7 Length = 379 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 106/387 (27%), Positives = 171/387 (44%), Gaps = 31/387 (8%) Query: 15 LQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQ--SKART 72 ++Y + K+K++ +G YP ++L R +KL+ DP + KK DK + K Sbjct: 1 MRYSFGDKRKLITIGQYPSVSLEQTRENAIGYKKLILAEADPQENKKLDKAAKIKMKEGQ 60 Query: 73 FKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGER----------NIAELKTRDLL 121 V W K+ + R + +E +L + +I ++ D+ Sbjct: 61 LHLVVEAWLKFKEKQVTYSTLKRDRRMMEQHLLPNFSKYESDRKIVSSTHIEDIAHSDIT 120 Query: 122 APIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA---VASCNRQHRPA 178 I ++ R+E+A RL +I ++A+ G + N ++ + + Sbjct: 121 HIIAKIQDY-RVELARRLFAHCLSIWQFALGRGYTETNYLFKIDTKQLLLPKVTNHYEKI 179 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 + + ELL ID Y + R A++ +I +R+ L +WS IDFE I TIP Sbjct: 180 TDEATLGELLRAIDGYIHSSIIRSALKFVSIIPLRAENLATLKWSYIDFEKKILTIPRSE 239 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 + K +PL TQA+ ILK+IK+ G IF G + HKPM + Sbjct: 240 MKVKK--------KSFPDFSLPLPTQAIEILKEIKKNTGWGVWIFHGHNKIHKPMVSESA 291 Query: 299 NSALRVMGY---DTKVEVCGHGFRTMACSSL---VESGLWSRDAVERQMSHMARNSVRAA 352 N ALR MG+ + H FR S + S + E + H N+V A Sbjct: 292 NKALRSMGFADAKRGRKQTLHSFRGTFRSLCDTHQDKHNASFEIKEAVLDHRIGNNVTQA 351 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRE 379 Y+HKA ++E+ R +LQWWAD+LD +E Sbjct: 352 YLHKAYYVEQMRPLLQWWADYLDELKE 378 >UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=A4F5J8_9BACT Length = 390 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 93/369 (25%), Positives = 164/369 (44%), Gaps = 25/369 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+G+ +R YRY +Q+ + LG Y EITLA AR + +A+ LA G+ P KK Sbjct: 26 LYLSVAPSGTMSFRFNYRYNNRQQTVTLGKYGEITLAQAREKLLKAKADLAAGISPAKKK 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + K ++ V ++ + ++ ++++ L ALG+ ++ E+ ++ Sbjct: 86 QEIKNTLAENS--FSVWLDKYTEECGVADSTKKMRGYAIDNYLRPALGKMSLFEITENEV 143 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQEMAGAVASCNRQHRPAL 179 A + + A + + +A G +P + + + A+ Sbjct: 144 RALAEDLVKQQAPSTALLCRMIIKNVYTFASMHGGPKLKSPTDFVRPSSIHTFKSRTRAM 203 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 + I +L I+ + ++ A +L LL +R SE+ WSEID+ W IP ER Sbjct: 204 SPREIGYVLNGIEQSSSDISSKSAFKLILLTLLRKSEVINGVWSEIDWNEKTWRIPAER- 262 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF-YGAHDLIFIGDHDSHKPMSENTV 298 K + H V LS QA IL ++ D IF + +KPM+ +T Sbjct: 263 -----------MKTKRPHNVYLSKQAFDILVCLRTLSTCKSDFIFPAKYGLNKPMATSTP 311 Query: 299 NSALRVMGYDTK------VEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 N L + + K H R A + L E+ ++ D +E ++H+A + VRA Sbjct: 312 NRLLELGMANAKKAGIEIEPCTIHDLRRTASTLLNEA-EFNSDWIEASLAHVA-SGVRAV 369 Query: 353 YIHKAEHLE 361 Y + A++ E Sbjct: 370 Y-NVADYRE 377 >UniRef50_A3WKP7 Site-specific recombinase, phage integrase family protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WKP7_9GAMM Length = 411 Score = 234 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 81/398 (20%), Positives = 156/398 (39%), Gaps = 44/398 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALG-VYPEITLADARVRRDEARKLLANGVDPGDK 59 ++ + G+ W ++Y Y GK+K + L YP +LADA+++ R + NG+DP + Sbjct: 24 LYFRIE-QGTASWFVRYTYAGKRKTITLSEGYPNCSLADAKIQAAAIRSKVKNGIDPQLE 82 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 ++ + T ++ +W K H + + L + LG+ ++ ++ D Sbjct: 83 RRRE--TGGAIHTVHDLFNDWFDRAVKNRVKHPGNDERVYRNYLKSRLGKYSLKDITPID 140 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA----SCNRQH 175 + + ++ +G ++R + + ++ L+ NPA G S + Sbjct: 141 VRNVLDELQQTGNKTTSSRALSIMKRMFNHGIKLNLVSSNPAIYFTGVDVGQDYSPRERS 200 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 A E+K + K R + L + R SE+ +RW +ID E W P Sbjct: 201 LSADEIKTAFSVFRKQQDIFTRDNYLACLL-LLHLGCRKSEIISSRWEQIDLEDQTWFFP 259 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH--DSHKPM 293 +K VP+ Q L +++++K + +F + Sbjct: 260 --------------ENKTSKPITVPIPNQMLPVIEELKVRCAGSEYVFPSRRRSKRRGYI 305 Query: 294 SENTVNSAL----------------RVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAV 337 S++T+N AL V+G H R + L + + Sbjct: 306 SDDTLNHALAKLFGQKVDSKKQPYPNVLGSAGVDHFTVHDLRRTYRTLLAKLKV-PDAIA 364 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLD 375 ER ++H R ++ ++ ++LEERR ADFL+ Sbjct: 365 ERCLNHELRGVLK--VYNQYDYLEERREANAKVADFLE 400 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P39347 Putative prophage P4 integrase n=97 Tax=Enteroba... 456 e-127 UniRef50_Q8VQN9 CP4-like integrase n=87 Tax=Enterobacteriaceae R... 450 e-125 UniRef50_C7SIL5 Integrase B n=113 Tax=Gammaproteobacteria RepID=... 429 e-119 UniRef50_P08320 Integrase n=31 Tax=root RepID=VINT_BPP4 429 e-118 UniRef50_C1M393 Bacteriophage integrase n=1 Tax=Citrobacter sp. ... 428 e-118 UniRef50_Q0P7K9 Bacteriophage integrase n=8 Tax=Enterobacteriace... 424 e-117 UniRef50_B5F474 Integrase n=26 Tax=Proteobacteria RepID=B5F474_S... 422 e-116 UniRef50_C1D8D2 CP4 integrase protein n=12 Tax=Proteobacteria Re... 421 e-116 UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronos... 408 e-112 UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4S... 408 e-112 UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio s... 406 e-112 UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX 404 e-111 UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacter... 402 e-110 UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio... 402 e-110 UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria... 399 e-110 UniRef50_D0BVL9 Phage integrase n=2 Tax=Acinetobacter RepID=D0BV... 396 e-109 UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp... 394 e-108 UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio R... 394 e-108 UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VM... 390 e-107 UniRef50_A1VQL7 Phage integrase family protein n=2 Tax=Burkholde... 389 e-107 UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepI... 388 e-106 UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 Re... 387 e-106 UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter ... 385 e-105 UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root Rep... 384 e-105 UniRef50_Q2T016 Site-specific recombinase, phage integrase famil... 382 e-104 UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea... 381 e-104 UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio ... 380 e-104 UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacte... 379 e-104 UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas flu... 379 e-104 UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteob... 377 e-103 UniRef50_C0N6F7 Site-specific recombinase, phage integrase famil... 375 e-102 UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholde... 375 e-102 UniRef50_B1Y3M2 Integrase family protein n=4 Tax=Proteobacteria ... 374 e-102 UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli R... 374 e-102 UniRef50_D0W4G5 Site-specific recombinase, phage integrase famil... 374 e-102 UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfo... 371 e-101 UniRef50_B4X5T7 Site-specific recombinase, phage integrase famil... 371 e-101 UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochl... 368 e-100 UniRef50_Q2N8A1 Symbiosis island integrase n=12 Tax=Bacteria Rep... 367 e-100 UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomo... 367 e-100 UniRef50_C6RSU9 Phage integrase family protein n=3 Tax=Acinetoba... 366 e-100 UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomo... 366 e-100 UniRef50_B7MX56 Integrase from prophage n=96 Tax=Gammaproteobact... 366 1e-99 UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella fer... 365 1e-99 UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobac... 365 2e-99 UniRef50_A3M8S0 Putative integrase n=1 Tax=Acinetobacter baumann... 362 9e-99 UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomon... 362 1e-98 UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillu... 361 2e-98 UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobac... 361 3e-98 UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobac... 361 4e-98 UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae R... 361 4e-98 UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobac... 359 7e-98 UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteria... 359 2e-97 UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholde... 358 2e-97 UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enter... 358 2e-97 UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTA... 358 2e-97 UniRef50_B7I6Z3 Site-specific recombinase, phage integrase famil... 357 3e-97 UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadacea... 357 6e-97 UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophil... 356 6e-97 UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammapro... 356 7e-97 UniRef50_D1B120 Integrase family protein n=1 Tax=Sulfurospirillu... 356 7e-97 UniRef50_A1SRI6 Phage integrase family protein n=2 Tax=Alteromon... 356 9e-97 UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammapro... 356 9e-97 UniRef50_Q0I4F8 Integrase n=1 Tax=Haemophilus somnus 129PT RepID... 355 1e-96 UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_A... 355 2e-96 UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovoran... 354 3e-96 UniRef50_Q167M4 CP4-like integrase, putative n=40 Tax=Alphaprote... 354 3e-96 UniRef50_Q3SHC8 Probable cp4-like integrase protein n=1 Tax=Thio... 354 4e-96 UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus p... 353 5e-96 UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacte... 352 1e-95 UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV 352 2e-95 UniRef50_Q4K6S7 Site-specific recombinase, phage integrase famil... 351 2e-95 UniRef50_A6QCY9 Site-specific recombinase, phage integrase famil... 351 2e-95 UniRef50_Q0I4P6 Integrase n=14 Tax=Pasteurellaceae RepID=Q0I4P6_... 351 4e-95 UniRef50_D2MI75 Phage integrase family protein n=1 Tax=Candidatu... 350 6e-95 UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalole... 350 7e-95 UniRef50_B3GXJ8 Prophage CP4-57 integrase n=4 Tax=Pasteurellacea... 349 2e-94 UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5... 348 2e-94 UniRef50_A1W8P6 Phage integrase family protein n=4 Tax=Comamonad... 347 5e-94 UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingell... 347 6e-94 UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, pha... 345 2e-93 UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombina... 344 2e-93 UniRef50_B1Y106 Integrase family protein n=1 Tax=Leptothrix chol... 344 4e-93 UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepI... 344 5e-93 UniRef50_C6XEE3 Integrase family protein n=2 Tax=Proteobacteria ... 344 5e-93 UniRef50_B6BKY5 DNA integration/recombination/inversion protein ... 343 5e-93 UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804... 343 7e-93 UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepI... 343 8e-93 UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_P... 343 9e-93 UniRef50_C7HXY0 Integrase family protein n=1 Tax=Thiomonas inter... 342 1e-92 UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IG... 342 1e-92 UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacte... 342 1e-92 UniRef50_Q4QL03 Prophage CP4-57-like integrase n=11 Tax=Haemophi... 342 1e-92 UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZ... 342 1e-92 UniRef50_A9I0E1 Phage-related integrase n=5 Tax=Burkholderiales ... 341 4e-92 UniRef50_Q8W6M6 Putative uncharacterized protein orf1 n=1 Tax=Si... 341 4e-92 UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157... 340 7e-92 UniRef50_B9NUX0 Site-specific recombinase, phage integrase famil... 339 1e-91 UniRef50_Q46Z79 Phage integrase n=1 Tax=Ralstonia eutropha JMP13... 339 1e-91 UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria ... 339 1e-91 UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola... 339 1e-91 UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria R... 339 1e-91 UniRef50_A6SWC6 Prophage integrase n=1 Tax=Janthinobacterium sp.... 338 2e-91 UniRef50_Q0C1T8 Site-specific recombinase, phage integrase famil... 338 2e-91 UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium ... 335 1e-90 UniRef50_C8NCE3 Phage integrase family site-specific recombinase... 333 6e-90 UniRef50_Q5R097 Integrase n=2 Tax=Idiomarina RepID=Q5R097_IDILO 333 6e-90 UniRef50_Q3JXH9 Integrase or site-specific recombinase n=24 Tax=... 333 7e-90 UniRef50_C6ALW6 Prophage integrase n=2 Tax=Pasteurellaceae RepID... 333 7e-90 UniRef50_A9VZC1 Integrase family protein n=3 Tax=Alphaproteobact... 331 2e-89 UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrop... 331 3e-89 UniRef50_D0J426 Phage integrase n=1 Tax=Comamonas testosteroni C... 330 4e-89 UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID... 330 4e-89 UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria ... 330 5e-89 UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion p... 328 2e-88 UniRef50_B5JZM6 Site-specfic recombinase, phage integrase family... 328 3e-88 UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella Rep... 326 1e-87 UniRef50_Q1NGR6 Putative phage integrase n=1 Tax=Sphingomonas sp... 325 1e-87 UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae ... 325 2e-87 UniRef50_A4VPC8 Site-specific recombinase, phage integrase famil... 324 4e-87 UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium ... 323 7e-87 UniRef50_A7H0X5 DNA integration/recombination/inversion protein ... 323 7e-87 UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJ... 323 9e-87 UniRef50_D0D2S4 Site-specfic recombinase, phage integrase family... 323 9e-87 UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE4... 322 1e-86 UniRef50_Q5LS43 Site-specfic recombinase, phage integrase family... 322 2e-86 UniRef50_A5EUW8 Bacteriophage P4-like integrase n=3 Tax=root Rep... 320 4e-86 UniRef50_A3ZAX6 Prophage CP4-like integrase n=2 Tax=Synechococcu... 320 4e-86 UniRef50_A8EWJ5 Phage integrase n=1 Tax=Arcobacter butzleri RM40... 319 8e-86 UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1... 319 1e-85 UniRef50_B9D1P3 DNA integration/recombination/inversion protein ... 319 1e-85 UniRef50_D0SVD1 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 317 4e-85 UniRef50_A8EUF6 Putative phage integrase n=1 Tax=Arcobacter butz... 317 4e-85 UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphil... 317 5e-85 UniRef50_C0VMY9 Integrase n=1 Tax=Acinetobacter sp. ATCC 27244 R... 316 7e-85 UniRef50_A3UDD1 Symbiosis island integrase n=1 Tax=Oceanicaulis ... 315 1e-84 UniRef50_B5J5X2 Site-specific recombinase, phage integrase famil... 315 1e-84 UniRef50_Q1QLT5 Phage integrase n=2 Tax=Alphaproteobacteria RepI... 315 2e-84 UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EV... 314 3e-84 UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C... 314 3e-84 UniRef50_D0SUB2 Predicted protein n=2 Tax=Acinetobacter RepID=D0... 314 3e-84 UniRef50_B8F737 Phage integrase family site specific recombinase... 314 4e-84 UniRef50_A1WP11 Phage integrase family protein n=1 Tax=Vermineph... 314 5e-84 UniRef50_B7UT12 Predicted P4-family integrase n=26 Tax=Enterobac... 312 2e-83 UniRef50_A7JZW2 Site-specific recombinase, phage integrase famil... 311 3e-83 UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio... 311 3e-83 UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanell... 311 3e-83 UniRef50_Q12EX0 Phage integrase n=5 Tax=Proteobacteria RepID=Q12... 309 1e-82 UniRef50_A7JWM6 Possible bacteriophage integrase n=3 Tax=Pasteur... 309 1e-82 UniRef50_B3R9I1 Prophage INTEGRASE PROTEIN n=1 Tax=Cupriavidus t... 309 1e-82 UniRef50_Q0I233 Phage integrase n=5 Tax=Pasteurellaceae RepID=Q0... 309 1e-82 UniRef50_C6RKK3 Phage integrase n=3 Tax=Acinetobacter RepID=C6RK... 309 2e-82 UniRef50_Q4FSX1 Probable phage integrase n=1 Tax=Psychrobacter a... 309 2e-82 UniRef50_D0CDZ4 DNA integration/recombination/inversion protein ... 308 2e-82 UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium ML... 308 2e-82 UniRef50_UPI0001BCF8EC putative bacteriophage integrase n=1 Tax=... 307 5e-82 UniRef50_C8Q072 Phage integrase family protein n=1 Tax=Enhydroba... 307 6e-82 UniRef50_A1W6C2 Phage integrase family protein n=8 Tax=Burkholde... 304 4e-81 UniRef50_UPI0000E0F7C9 site-specific recombinase, phage integras... 304 5e-81 UniRef50_A7H3V7 Putative site-specific recombinase, phage integr... 303 6e-81 UniRef50_C6RLT7 Phage integrase n=2 Tax=Acinetobacter radioresis... 303 7e-81 UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP... 303 9e-81 UniRef50_Q1N9F3 Putative integrase prophage protein n=1 Tax=Sphi... 303 1e-80 UniRef50_B7XGJ8 Integrase n=9 Tax=root RepID=B7XGJ8_PSEPU 302 1e-80 UniRef50_C6N3S0 Putative phage integrase family protein n=1 Tax=... 302 2e-80 UniRef50_A1U0R6 Phage integrase family protein n=2 Tax=Gammaprot... 302 2e-80 UniRef50_C8Q013 Phage integrase n=1 Tax=Enhydrobacter aerosaccus... 302 2e-80 UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3... 301 2e-80 UniRef50_A1ATP4 Phage integrase family protein n=2 Tax=Desulfuro... 301 2e-80 UniRef50_B2TTV9 Site-specific recombinase, phage integrase famil... 301 4e-80 UniRef50_B7UP04 Predicted integrase n=24 Tax=Proteobacteria RepI... 300 5e-80 UniRef50_Q2NDX8 Site-specfic recombinase, phage integrase family... 299 9e-80 UniRef50_C8PFJ4 DNA integration/recombination/inversion protein ... 299 1e-79 UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacteriu... 299 1e-79 UniRef50_Q0BR52 DNA integration/recombination/inversion protein ... 298 2e-79 UniRef50_A3M8T8 Phage integrase n=1 Tax=Acinetobacter baumannii ... 298 3e-79 UniRef50_B3AX37 Site-specific recombinase, phage integrase famil... 297 4e-79 UniRef50_Q7MPT5 Site-specific recombinase, phage integrase famil... 297 5e-79 UniRef50_Q1QAC1 Phage integrase n=2 Tax=Psychrobacter RepID=Q1QA... 297 7e-79 UniRef50_C7I5J5 Integrase family protein n=2 Tax=Thiomonas inter... 296 7e-79 UniRef50_B0SXU9 Integrase family protein n=6 Tax=Proteobacteria ... 296 8e-79 UniRef50_UPI0000F2F6E4 putative integrase n=1 Tax=Acinetobacter ... 295 1e-78 UniRef50_C9M6R5 Site-specific recombinase, phage integrase famil... 295 2e-78 UniRef50_C7JAN4 Phage integrase n=17 Tax=Acetobacteraceae RepID=... 295 2e-78 UniRef50_B5J8B6 Site-specific recombinase, phage integrase famil... 295 2e-78 UniRef50_A7ZG37 Symbiosis island integrase n=3 Tax=Campylobacter... 294 5e-78 UniRef50_A4SXW8 Phage integrase family protein n=1 Tax=Polynucle... 293 7e-78 UniRef50_D2LD60 Integrase family protein n=1 Tax=Rhodomicrobium ... 292 2e-77 UniRef50_D1Y3S1 Site-specific recombinase, phage integrase famil... 292 2e-77 UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobac... 291 3e-77 UniRef50_Q74H29 Integrative genetic element Gsu32, integrase n=1... 291 3e-77 UniRef50_A9HQA6 Phage-related integrase n=5 Tax=Rhodobacteraceae... 290 5e-77 UniRef50_A1WQF8 Phage integrase family protein n=1 Tax=Vermineph... 290 6e-77 UniRef50_C1D7T3 Integrase n=2 Tax=Laribacter hongkongensis HLHK9... 290 7e-77 UniRef50_B0UGI0 Integrase family protein n=1 Tax=Methylobacteriu... 290 8e-77 UniRef50_B8ERI0 Integrase family protein n=1 Tax=Methylocella si... 289 9e-77 UniRef50_C7JFF4 Phage integrase n=8 Tax=Acetobacter pasteurianus... 289 9e-77 UniRef50_C8PUK8 Phage integrase family protein n=1 Tax=Enhydroba... 289 1e-76 UniRef50_A3VAJ4 Site-specific recombinase, phage integrase famil... 289 2e-76 UniRef50_A4A7S2 Phage-related integrase n=1 Tax=Congregibacter l... 288 3e-76 UniRef50_B9R123 Site-specific recombinase, phage integrase famil... 287 5e-76 UniRef50_B0U0U5 Phage integrase n=1 Tax=Francisella philomiragia... 287 6e-76 UniRef50_Q9RM38 Integrase (Fragment) n=56 Tax=Enterobacteriaceae... 287 6e-76 UniRef50_A2SG96 Integrase or site-specific recombinase n=19 Tax=... 286 8e-76 UniRef50_A3JW30 Site-specfic recombinase, phage integrase family... 286 9e-76 UniRef50_A1AQ50 Phage integrase family protein n=1 Tax=Pelobacte... 286 1e-75 UniRef50_Q1R2C9 Integrase-like protein n=9 Tax=root RepID=Q1R2C9... 286 1e-75 UniRef50_B0VTB2 Putative prophage integrase n=1 Tax=Acinetobacte... 285 2e-75 UniRef50_Q3J2T0 Putative P4-family integrase n=5 Tax=Rhodobacter... 285 3e-75 UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas put... 285 3e-75 UniRef50_C3MAV8 DNA integration/recombination/invertion protein ... 284 3e-75 UniRef50_Q92LG2 Phage-related integrase n=1 Tax=Sinorhizobium me... 284 4e-75 UniRef50_B5J7B6 Site-specific recombinase, phage integrase famil... 284 4e-75 UniRef50_C6XJP3 Integrase family protein n=1 Tax=Hirschia baltic... 283 6e-75 UniRef50_A6Q4N1 Site-specific recombinase, phage integrase famil... 283 1e-74 UniRef50_C6V8W5 Integrase n=4 Tax=Enterobacteriaceae RepID=C6V8W... 283 1e-74 UniRef50_B0T5C0 Integrase family protein n=31 Tax=Proteobacteria... 282 2e-74 UniRef50_D1AZM1 Integrase family protein n=1 Tax=Sulfurospirillu... 282 2e-74 UniRef50_C8UI65 Putative integrase n=1 Tax=Escherichia coli O111... 281 2e-74 UniRef50_A5PCI3 Phage integrase n=1 Tax=Erythrobacter sp. SD-21 ... 281 3e-74 UniRef50_A0Q3W3 Phage integrase n=8 Tax=Francisella RepID=A0Q3W3... 280 5e-74 UniRef50_D2M358 Integrase family protein n=1 Tax=Rhodopseudomona... 280 5e-74 UniRef50_A3M3W1 Phage integrase n=4 Tax=Acinetobacter baumannii ... 280 7e-74 UniRef50_B5QDA8 Phage integrase family protein n=1 Tax=Salmonell... 280 7e-74 UniRef50_D1Y2Y2 DNA integration/recombination/inversion protein ... 279 1e-73 UniRef50_Q31FR8 Tyrosine recombinase n=1 Tax=Thiomicrospira crun... 278 2e-73 UniRef50_D1D4Y4 Site-specific recombinase n=19 Tax=Neisseria Rep... 278 3e-73 UniRef50_A3WKP7 Site-specific recombinase, phage integrase famil... 277 6e-73 UniRef50_D1R6D1 Putative uncharacterized protein n=1 Tax=Parachl... 277 7e-73 UniRef50_Q8DF52 Phage integrase n=1 Tax=Vibrio vulnificus RepID=... 276 8e-73 UniRef50_Q21D10 Phage integrase n=3 Tax=Alphaproteobacteria RepI... 275 1e-72 UniRef50_C6E138 Integrase family protein n=1 Tax=Geobacter sp. M... 275 1e-72 UniRef50_A6VNS1 Phage integrase family protein n=7 Tax=Pasteurel... 275 2e-72 UniRef50_Q39TC0 Phage integrase n=1 Tax=Geobacter metallireducen... 274 3e-72 UniRef50_B5KC37 Putative phage-related integrase n=1 Tax=Octadec... 274 5e-72 UniRef50_B4SNF6 Integrase family protein n=2 Tax=Proteobacteria ... 274 5e-72 UniRef50_B4T1L5 Phage integrase family protein n=12 Tax=Enteroba... 273 6e-72 UniRef50_Q98MP8 Probable prophage integrase n=2 Tax=Proteobacter... 273 6e-72 UniRef50_A5ELC2 Putative prophage integrase n=2 Tax=Bradyrhizobi... 273 9e-72 UniRef50_Q3J1E6 Possible phage-related integrase n=2 Tax=Rhodoba... 272 1e-71 UniRef50_Q1GUV7 Phage integrase n=1 Tax=Sphingopyxis alaskensis ... 272 1e-71 UniRef50_A6U968 Phage integrase family protein n=2 Tax=Rhizobial... 272 2e-71 UniRef50_Q7V8P5 Phage integrase n=3 Tax=Cyanobacteria RepID=Q7V8... 272 2e-71 UniRef50_Q1YTS1 Putative phage integrase n=1 Tax=gamma proteobac... 272 2e-71 UniRef50_A5G635 Phage integrase family protein n=1 Tax=Geobacter... 271 3e-71 UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultu... 271 3e-71 UniRef50_B3R3M6 Prophage integrase n=4 Tax=Bacteria RepID=B3R3M6... 271 4e-71 UniRef50_UPI00003841F3 COG0582: Integrase n=1 Tax=Magnetospirill... 269 1e-70 UniRef50_B8GZR1 Bacteriophage P4 integrase n=3 Tax=Proteobacteri... 268 3e-70 UniRef50_B6JEM3 Phage integrase n=1 Tax=Oligotropha carboxidovor... 268 4e-70 Sequences not found previously or not previously below threshold: >UniRef50_P39347 Putative prophage P4 integrase n=97 Tax=Enterobacteriaceae RepID=INTB_ECOLI Length = 396 Score = 456 bits (1173), Expect = e-127, Method: Composition-based stats. Identities = 396/396 (100%), Positives = 396/396 (100%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK Sbjct: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL Sbjct: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE Sbjct: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP Sbjct: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS Sbjct: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 Query: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL Sbjct: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 Query: 361 EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ 396 EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ Sbjct: 361 EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ 396 >UniRef50_Q8VQN9 CP4-like integrase n=87 Tax=Enterobacteriaceae RepID=Q8VQN9_ECOLX Length = 421 Score = 450 bits (1159), Expect = e-125, Method: Composition-based stats. Identities = 264/396 (66%), Positives = 325/396 (82%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M LLVHPNGS+YWRL+YR GK+K LALGVYPE++L++AR +RDEARKL++ G+DP ++K Sbjct: 26 MFLLVHPNGSRYWRLRYRILGKEKTLALGVYPEVSLSEARTKRDEARKLISEGIDPCEQK 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + KV +F+ +A WH +NK+W++ H+ +VLKSLE ++F +G R+I L T DL Sbjct: 86 RAKKVVPDLQLSFEHIARRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDL 145 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 L P++A E E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+ + RQHRPAL+ Sbjct: 146 LIPVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALD 205 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 L R+PELL++I+SY G+P+TR A+ L LL+FIRSSELR+ARWSEID + ++WTIP ER+P Sbjct: 206 LSRLPELLSRINSYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAERKP 265 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 +PGVK SHRGSKMRT HLVPLS QA+AIL +++ + G + LIF G HD KP+SENTVN Sbjct: 266 LPGVKFSHRGSKMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENTVNK 325 Query: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 ALRVMGYDT EVCGHGFR MACS+L+ESGLWSRDA ERQMSH RN VRAAYIHKAEHL Sbjct: 326 ALRVMGYDTTKEVCGHGFRAMACSALIESGLWSRDAGERQMSHQERNGVRAAYIHKAEHL 385 Query: 361 EERRLMLQWWADFLDVNRERFISPFEYAKINNPLKQ 396 EERRLMLQWWADFLD NRERFISPFEYAKINNPLKQ Sbjct: 386 EERRLMLQWWADFLDANRERFISPFEYAKINNPLKQ 421 >UniRef50_C7SIL5 Integrase B n=113 Tax=Gammaproteobacteria RepID=C7SIL5_ECOLX Length = 420 Score = 429 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 212/390 (54%), Positives = 287/390 (73%), Gaps = 1/390 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV P GS++W L+YR GK+ +ALG YP ++L+DAR +R+ RK+LA ++P ++ Sbjct: 26 LYLLVKPGGSRHWYLKYRINGKESRIALGAYPAVSLSDARQQREGVRKMLALNINPVQQR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 ++ ++ + FK VA+ WH +N+KWS++ A R+L SL +++F +G ++ELK R Sbjct: 86 AAERGSRTPDKVFKNVALAWHKSNRKWSQNTADRLLASLNNHIFPVIGNLPVSELKPRHF 145 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + +K +E G LEVA+R +Q + IMR+AV GLID NPA + G R+H PAL Sbjct: 146 IDLLKRIEEKGLLEVASRTRQHLSNIMRHAVHQGLIDTNPAANLGGVTTPPVRRHYPALP 205 Query: 181 LKRIPELLTKIDSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 L+R+PELL +I +Y GR LTR A+ L L +FIRSSELRFARWSEIDF +WTIP RE Sbjct: 206 LERLPELLERIGAYHQGRELTRLAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATRE 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 PI GV++S RG+KMR +H+VPLS Q++AILKQIK G ++LIF GDH+ +KPM ENTVN Sbjct: 266 PIIGVRYSGRGAKMRMSHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVN 325 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 ALRVMGYDTK ++CGHGFR MACS+L+ESGLW++DAVERQMSH RN+VR AYIHKAEH Sbjct: 326 KALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEH 385 Query: 360 LEERRLMLQWWADFLDVNRERFISPFEYAK 389 LE R+ M+QWW+D+L+ RE + P+ K Sbjct: 386 LEARKAMMQWWSDYLEACRESYAPPYTIGK 415 >UniRef50_P08320 Integrase n=31 Tax=root RepID=VINT_BPP4 Length = 439 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 227/385 (58%), Positives = 291/385 (75%), Gaps = 2/385 (0%) Query: 1 MHLLVHPNGSKYWRLQYRY--EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V GSKYWR++YR + K+ LA GV+P +TLA AR +RDEA+KLL G+DP Sbjct: 30 LYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKLLVQGIDPKV 89 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 +K + E S A TF+ +A EWH +NK+WSEDH RVL+ LE +F +G +I +LKT Sbjct: 90 VQKEARAENSGAYTFEAIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTS 149 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 LLAPIK V+ SG+ +VA RLQQR TAIMRYAVQ+ ID NPA +MAGA+++ +H PA Sbjct: 150 HLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPA 209 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L R PE L ++ +Y GR +TR A++L+LL F+RSSELRFARW E DF+ S+W IP +R Sbjct: 210 LPSSRFPEFLARLAAYRGRVMTRIAVKLSLLTFVRSSELRFARWDEFDFDKSLWRIPAKR 269 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 E I GV++S+RG KM+ H+VPLS QA+ +L Q+KQ G +L+F GDHD+ K MSENTV Sbjct: 270 EEIKGVRYSYRGMKMKEEHIVPLSRQAMILLNQLKQISGDKELLFPGDHDATKVMSENTV 329 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 NSALR MGYDTK EVCGHGFRTMA +L ESGLWS DA+ERQ+SH RN+VRAAYIH +E Sbjct: 330 NSALRAMGYDTKTEVCGHGFRTMARGALGESGLWSDDAIERQLSHSERNNVRAAYIHTSE 389 Query: 359 HLEERRLMLQWWADFLDVNRERFIS 383 HL+ERRLM+QWWAD+LD+NR ++IS Sbjct: 390 HLDERRLMMQWWADYLDMNRNKYIS 414 >UniRef50_C1M393 Bacteriophage integrase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M393_9ENTR Length = 420 Score = 428 bits (1100), Expect = e-118, Method: Composition-based stats. Identities = 195/393 (49%), Positives = 284/393 (72%), Gaps = 1/393 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L++ +GS+ W ++R+ GKQ +A G YP+IT+ADAR +RD ARKLL +G+ P + + Sbjct: 26 LYLVISNSGSRLWYFRFRFNGKQNRIAFGPYPQITIADARRKRDAARKLLTSGISPSEHR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K++K SK RTF+ +A+ WH + +WSE HA+++L L+ +F +G+++IA+++T Sbjct: 86 KSEKAASSKTRTFQHIALAWHSSCLNRWSEGHANKILVCLQRYVFPYVGKKDIAKIETFH 145 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 L IK V G +VA+R++Q T IMR++VQ GLI YNPA ++ + QH PAL Sbjct: 146 LAELIKEVNNKGVHDVASRIRQYLTKIMRHSVQQGLIHYNPALDLEDIITPVVVQHYPAL 205 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 L+ + ELL KID Y G+ L R A+EL+L +F+R+SELRFARW E + + IWTIP +R+ Sbjct: 206 PLRSLSELLIKIDDYKGQELIRLALELSLHVFLRASELRFARWDEFNMKIHIWTIPAKRK 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 + GV+ S RGSKM+ HLVPLS QA+ IL++IK+ G + +F + ++PMSENT+N Sbjct: 266 AVDGVRFSDRGSKMKEEHLVPLSDQAMKILERIKKISGESEFVFHSIRNLNRPMSENTIN 325 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 ALRV+GY TK +VC HGFRTMACS+L ESG WS+DA+ERQMSH RN+VRAAY+HKAE+ Sbjct: 326 KALRVIGYCTKNDVCAHGFRTMACSALNESGKWSKDAIERQMSHKDRNNVRAAYLHKAEY 385 Query: 360 LEERRLMLQWWADFLDVNRERFISPFEYAKINN 392 LEER M+QWW+D+L RE++++P+ +A+ + Sbjct: 386 LEERFEMMQWWSDYLSTTREKYVAPYIFARWPD 418 >UniRef50_Q0P7K9 Bacteriophage integrase n=8 Tax=Enterobacteriaceae RepID=Q0P7K9_ECOLX Length = 423 Score = 424 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 211/395 (53%), Positives = 289/395 (73%), Gaps = 1/395 (0%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV P GS+ W L+YR GK+ +ALG YP ++L+DAR +R+ RK+LA ++P ++ Sbjct: 26 LYLLVKPGGSRLWYLKYRINGKESRIALGAYPAVSLSDARQQREGIRKMLALNINPAQQR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 ++ + + + FK VA+EWH + KKWS++ A RVL L ++F +G + ELK+R Sbjct: 86 AAERGSRMQEKMFKSVALEWHSSKKKWSQNTADRVLARLNRHVFPTIGHLPVTELKSRHF 145 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + +K +E G LEVA+R +Q + IMRYAV GLI+ NPA + G AS R+H P L Sbjct: 146 IELLKGIEEKGLLEVASRSRQHLSNIMRYAVHQGLIEINPAANLDGVTASPARRHYPTLP 205 Query: 181 LKRIPELLTKIDSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 L+R+PELL +IDSY GR LTR A+ LTL +FIRSSELR+ARW+EI+F IWTIP RE Sbjct: 206 LERLPELLERIDSYHQGRELTRLAVLLTLHVFIRSSELRYARWTEINFRNRIWTIPATRE 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 I GV++S RG+KMRT H+VPLS Q ++ILK+IK+ G ++L+F G HD +KPMSENT+N Sbjct: 266 AIAGVRYSSRGAKMRTPHIVPLSEQVISILKRIKEISGGYELVFPGYHDPYKPMSENTIN 325 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 ALR MGY+TK ++CGHGFR MACS+L+ESGLWS+DAVERQMSH RN+VR AYIHKAEH Sbjct: 326 KALRQMGYNTKQDICGHGFRAMACSALMESGLWSQDAVERQMSHQERNTVRLAYIHKAEH 385 Query: 360 LEERRLMLQWWADFLDVNRERFISPFEYAKINNPL 394 +E R M+QWW+D+LD+ E ++ P+ +++ N L Sbjct: 386 MEARMDMMQWWSDYLDMCSEIWVPPYIWSQQNINL 420 >UniRef50_B5F474 Integrase n=26 Tax=Proteobacteria RepID=B5F474_SALA4 Length = 449 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 220/393 (55%), Positives = 291/393 (74%), Gaps = 2/393 (0%) Query: 1 MHLLVHPNGSKYWRLQYRY--EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V P GSKYWR++YR + K+ LA GVYP ITLA+AR +RD A+KLL+ G+DP Sbjct: 55 LYLEVSPKGSKYWRMKYRRPSDKKEDRLAFGVYPTITLAEARAKRDAAKKLLSQGIDPKV 114 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 ++K + E A F+ +A +WH +N WSEDH+HRVL +LE +F ++G+ + L+T Sbjct: 115 EQKGAQAEIEGAYLFETIARQWHASNLTWSEDHSHRVLLTLEQYIFPSIGQIDARTLRTS 174 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 LL PIKAV+ +G+ +VA RL QR AIMR+ VQ+ L++ NPA +MAGA+ S H PA Sbjct: 175 QLLNPIKAVDTAGKHDVAQRLMQRVNAIMRFGVQNDLLESNPASDMAGALLSVKATHHPA 234 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L KRIPE L ++ Y GR +TR A+ELTLL FIRSSE+RFARWSE++FE S WTIP R Sbjct: 235 LPPKRIPEFLERLSRYKGRLMTRLAVELTLLTFIRSSEMRFARWSEVNFERSEWTIPGIR 294 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 +PIPGVKHS RG KM+T H+VPLS QA I K++ G ++IF DHD K MSENTV Sbjct: 295 KPIPGVKHSERGMKMKTEHIVPLSKQAFDIFKRLHALSGKGEVIFPSDHDPKKVMSENTV 354 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 NSALRVMGYDTK EVCGHGFRTMA +L ES LW+ DA+ERQ+SH+ R +V+ +Y+H +E Sbjct: 355 NSALRVMGYDTKTEVCGHGFRTMARGALSESKLWNDDAIERQLSHVERKNVKGSYMHTSE 414 Query: 359 HLEERRLMLQWWADFLDVNRERFISPFEYAKIN 391 +LEERRLMLQWWAD++D N+ I+P+++A+++ Sbjct: 415 YLEERRLMLQWWADYIDANKNGSITPYDFARVH 447 >UniRef50_C1D8D2 CP4 integrase protein n=12 Tax=Proteobacteria RepID=C1D8D2_LARHH Length = 452 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 216/409 (52%), Positives = 276/409 (67%), Gaps = 20/409 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE----------------ITLADARVRRD 44 ++LL++PNGSKYWR+ YR GKQK LA+GVY + ++LADAR+ D Sbjct: 30 LYLLINPNGSKYWRMNYRINGKQKTLAIGVYCQFALVDDKGKARAEQVIMSLADARLHCD 89 Query: 45 EARKLLANGVDPGDKKKNDKVEQS--KARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLED 101 AR +LA G+DP + K+ K + +F VA EWH KW HA VL LE Sbjct: 90 AARAMLAKGIDPFETKQEAKKAANGLSPGSFAYVAREWHAKMANKWVPSHAANVLGRLER 149 Query: 102 NLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPA 161 +F +G AE++T+ +L ++ VE L+V +RL+Q I RYAVQ+G ID+NP Sbjct: 150 YIFPDIGHMPFAEIRTKHMLMALRKVEAKNILDVTSRLRQYLKQIGRYAVQTGRIDFNPG 209 Query: 162 QEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFAR 221 ++ GA+ + HRPAL L R+PELL +ID+ RPLTR AI LTLL F+RSSELRFAR Sbjct: 210 NDLDGALQTRRTVHRPALSLNRLPELLERIDAAKLRPLTRAAISLTLLTFVRSSELRFAR 269 Query: 222 WSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDL 281 W EIDF+ ++W IP ERE +PGVK S RG+KMRT HLVPL QALA+ +++ G +L Sbjct: 270 WEEIDFDRAVWLIPGEREALPGVKFSSRGAKMRTPHLVPLCQQALALFREVHAITGRFEL 329 Query: 282 IFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQM 341 +F GDHD +KPMSE+TVN AL+ MGYDTK EVCGHGFR MACS+L ESG +S +A+ERQM Sbjct: 330 VFAGDHDPYKPMSESTVNIALKRMGYDTKTEVCGHGFRAMACSALSESGQFSIEAIERQM 389 Query: 342 SHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER-FISPFEYAK 389 SH R+SVRAAY HKAE L ERR M+ WWADFLD RE +I P E+ + Sbjct: 390 SHQERDSVRAAYTHKAEFLTERRDMMGWWADFLDAQREGTYIEPLEFKR 438 >UniRef50_C0GR55 Integrase family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GR55_9DELT Length = 401 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 152/383 (39%), Positives = 229/383 (59%), Gaps = 19/383 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M+L V P G K WR +YR+ GK K+LALG YP+++LA AR + AR+ +A G DP K Sbjct: 26 MYLEVTPAGGKLWRFKYRFNGKNKLLALGKYPDVSLAKAREKLSIARQQIAEGKDPAYIK 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K +K E+ TFK + EW K W+ HA +V + LE ++ L +R I E+ R+ Sbjct: 86 KIEKAEKEN--TFKAITDEWWRAKKSTWTPGHAEKVYRRLEIDVLPYLKDRPIKEITARE 143 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +L +K E G + A RL Q + I +A+ SG ++NPA +++ A+ + + +RPA+ Sbjct: 144 ILEVLKKAEARGVTDTAYRLAQMCSNIFIFALASGRAEHNPAADISKALTAHPKTNRPAI 203 Query: 180 -ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 E I ELL ID +TG A+++ +L+F+R ELR A W+EI+F+ ++W +P +R Sbjct: 204 TEPDEIKELLLAIDGFTGSYTVLCALKIAILVFVRPGELRQASWAEINFDEALWYVPSQR 263 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 KM+ HLVPLS QA+ ILK I GA +F + +PMSENT+ Sbjct: 264 ------------MKMKREHLVPLSGQAVKILKDIHPLTGAGHYVFPSIRTNSRPMSENTL 311 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 N+ALR +GY + ++C HGFRTMA + L E G W D +E Q++H+ +N +R Y ++AE Sbjct: 312 NAALRRLGY-PQEKLCAHGFRTMASTRLHEMG-WPSDIIEFQLAHVDQNKIRGIY-NRAE 368 Query: 359 HLEERRLMLQWWADFLDVNRERF 381 +L++R M+Q WAD+LD + Sbjct: 369 YLDQRTKMMQAWADYLDDLKTGK 391 >UniRef50_A4SSF4 Phage integrase n=3 Tax=Proteobacteria RepID=A4SSF4_AERS4 Length = 404 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 171/394 (43%), Positives = 242/394 (61%), Gaps = 20/394 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV+ +G KYW+L+YR+ GK+K LALGVYPE++L +AR +RDEAR+++A G+DPG + Sbjct: 28 LFLLVNKSG-KYWKLKYRHGGKEKKLALGVYPEVSLREARAKRDEARRVIAEGIDPGLVR 86 Query: 61 KNDKVEQS--KARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K KV + + +A EWH + WS HA RV++SLE ++F LG I EL Sbjct: 87 KQSKVASRLVSENSLEVLAREWHQSQFALWSPGHATRVIESLEVDVFPDLGLVPITELTA 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L ++ VE G E A R+ QR +AIMRYA+Q+G YNPAQ++ GA+ + ++HRP Sbjct: 147 PMILEALRKVEKRGATETAGRILQRVSAIMRYAIQTGRASYNPAQDLRGALKATKQEHRP 206 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 AL +PE ++++ P TR A+ L +L R E+RFARW E D E + W IP Sbjct: 207 ALPRSELPEFFRRLEAEPLNPATRLALHLLMLTMTRPGEVRFARWDEFDMERAEWRIPAA 266 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R KMRT HLVPLS QALA+L ++ Q G +L+F + PMSENT Sbjct: 267 R------------MKMRTEHLVPLSRQALAVLDELHQLTGHCELLFPSERKLTNPMSENT 314 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 ++ A+ MGY HGFR +A ++L E G + D +ERQ++H RN VRAAY H+A Sbjct: 315 LSYAMGRMGYKGIA--TPHGFRALASTTLNEEG-FDPDVIERQLAHAERNKVRAAY-HRA 370 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFEYAKIN 391 E+L++RR +LQW ADF D R + P + ++ Sbjct: 371 EYLDDRRKLLQWLADFYDSQRGSNVLPVNFNRVG 404 >UniRef50_D2L516 Integrase family protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L516_9DELT Length = 417 Score = 406 bits (1043), Expect = e-112, Method: Composition-based stats. Identities = 162/399 (40%), Positives = 236/399 (59%), Gaps = 26/399 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P G K WR +Y ++GK+K+LALG +P++ L AR RRDEAR L+A GVDP +K+ Sbjct: 31 LFLQVTPTGGKLWRFKYLFDGKEKLLALGKWPDVGLKMARQRRDEARALVAQGVDPSEKR 90 Query: 61 KNDKVEQ-----SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAE 114 K D+ + A TF VA +WH K WSE HA ++L +E +LF G I Sbjct: 91 KQDRADAEGQAVENANTFAVVARDWHAKQVKVWSEGHAAKILARMEQHLFPVFGNIPITT 150 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 L+ +L ++ +E G E A RL+Q A+ +A+ +G+ + N ++ GA+A C Sbjct: 151 LRAPAILPTLRDIEDKGNHETAKRLRQYCEAVFTFAISTGIAERNVGADLRGALAPCRAT 210 Query: 175 HRPA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS--- 230 +RPA ++ K + +LL ID Y G P+T A+ L L+F+R ELR A WSEID +A+ Sbjct: 211 NRPAIIDPKGVAQLLRAIDGYQGSPVTVAALRLAPLVFVRPGELRQAEWSEIDLDAADGP 270 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 W+IP E+ KMR H+VPLS QA+ I+ +I G +F + Sbjct: 271 RWSIPAEK------------MKMRRDHVVPLSKQAVDIITEIYSLTGQDRYLFPCNRTKG 318 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 + MS +N+ALR MGY+ + E+C HGFR MA + L E G W+ D +ERQ++H RNS+R Sbjct: 319 RCMSNMALNAALRRMGYE-QGEMCAHGFRAMASTLLNELG-WNSDLIERQLAHAERNSIR 376 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDVNRER-FISPFEYA 388 AAY ++AE+L ERR M+Q WAD+LD+ + ++P Sbjct: 377 AAY-NRAEYLPERRRMMQAWADYLDMLKAGAKVTPLHAT 414 >UniRef50_Q93SE7 Integrase n=181 Tax=root RepID=Q93SE7_ECOLX Length = 394 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 156/384 (40%), Positives = 241/384 (62%), Gaps = 19/384 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M+LL++ NGSKYWR++YR+ GK+KML++GVYP++TLADAR +R EARKLLA G DPG+ K Sbjct: 26 MYLLINTNGSKYWRMKYRFAGKEKMLSIGVYPDVTLADAREKRSEARKLLAAGGDPGEAK 85 Query: 61 KNDKVEQS--KARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K+ Q TF+ +A EWH + +WS + ++ + E ++F +G+R IAE+K Sbjct: 86 KEEKIAQQMSLKNTFEAIAREWHQSKADRWSLRYRDEIIDTFEKDIFPYIGKRPIAEIKP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LL ++ +E G LE +++QR + RYA+ +G DYNPA ++A A+A+ + H P Sbjct: 146 MELLEALRKMEKRGALEKMRKVRQRCGEVFRYAIVTGRADYNPAPDLASALATPKKVHFP 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L +P L + YTG +T+ A ++ +L +R+ ELRFARW +IDFE +W IP E Sbjct: 206 FLTANELPHFLNDLAGYTGSIITKTATQIIMLTGVRTQELRFARWEDIDFETKLWEIPAE 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 KM+ H+VPLS Q + + KQ++ H L+FIG +D KP+S+ + Sbjct: 266 ------------VMKMKRPHIVPLSEQVIMLFKQLEPISKHHPLVFIGRNDPRKPISKES 313 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +N + ++GY K + GHGFR + L E G ++ +E Q++H+ +NS+R Y H A Sbjct: 314 INQVIELLGY--KGRLTGHGFRHTMSTILHEQG-FNSAWIEMQLAHVDKNSIRGTYNH-A 369 Query: 358 EHLEERRLMLQWWADFLDVNRERF 381 +L+ RR M+QW+AD++D R Sbjct: 370 LYLDGRREMMQWYADYIDSLSSRE 393 >UniRef50_B4RZR6 Prophage CP4-like integrase n=2 Tax=Proteobacteria RepID=B4RZR6_ALTMD Length = 412 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 167/395 (42%), Positives = 235/395 (59%), Gaps = 23/395 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV NGSKYWRL+YR++GKQK LA+GVYPE++L DAR EAR+ L + +DP K Sbjct: 26 LRLLVKKNGSKYWRLKYRFQGKQKTLAIGVYPEVSLKDAREAVSEARRQLRDDIDPSAIK 85 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K S+ F A W K +WSE HA R+ L DN LG+R I E+ Sbjct: 86 QEKKHLSSVSEIELFNTQARLWWNKQKGQWSEGHAARIWTRLNDNALKTLGKRPIGEITP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +D++ ++ +E G L+VA R+ Q + R+AVQ+G++ +NPA E++G + HR Sbjct: 146 QDIIRTVQKIETRGALDVAQRVLQDIRRVCRFAVQTGVLLHNPASELSGILEKRKTSHRA 205 Query: 178 ALELKRIPELLTKIDSYT--GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 +L + +P+ L +D+Y GR LT+ AIEL + F+R EL ARW E D E +W IP Sbjct: 206 SLPREELPQFLRDLDAYHQQGRLLTKLAIELLVHTFVRPGELAGARWDEFDLEEKLWRIP 265 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R KM++ H+VPLS QALA+L+ K F + +F + D K MS+ Sbjct: 266 AHR------------MKMKSDHIVPLSRQALAVLENTKPFSARFEFVFPSERDRFKQMSD 313 Query: 296 NTVNSALRVMGYD----TKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 NT+ A+ MGYD K + HGFR A S L E+G ++ DA+ERQ+SHM RN VRA Sbjct: 314 NTMRMAIFRMGYDGETKGKSKANPHGFRATASSILNETG-FNPDAIERQLSHMERNGVRA 372 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNR-ERFISPF 385 AY H A +LEER+ M+QWW+D+LD + ++P Sbjct: 373 AYTHHARYLEERKEMMQWWSDYLDSLKNNGNVTPI 407 >UniRef50_C8R2J0 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R2J0_9DELT Length = 420 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 139/397 (35%), Positives = 223/397 (56%), Gaps = 15/397 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGK----QKMLALGVYPEITLADARVRRDEARKLLANGVDP 56 ++L V P+G K+WR +YR+ G+ +K L+LG YP + L +AR +RDE R+ +A G+DP Sbjct: 26 LYLEVAPSGGKWWRFKYRFPGQGKIQEKRLSLGTYPGVGLKEARAKRDEMRRQIAQGIDP 85 Query: 57 GDKKKNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + +++ + + A +F+ VA WH N W+ H+ R+++ LE ++F LG R + ++ Sbjct: 86 ANLRRSTRGSGALAGSFEAVARLWHRNNSTDWAPSHSTRLIRRLEAHVFPYLGNRPVGDI 145 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 DL+ ++ ++ SG E A R+Q + RYAVQ G +Y+P+ + G + ++ Sbjct: 146 TAPDLMNVLERIKNSGHTETARRIQTICGQVFRYAVQKGFAEYDPSSALKGCLGKTTAKN 205 Query: 176 RPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 + E + LL ID Y G + R A++L L F+RS ELR ARW E D W I Sbjct: 206 MATITEPAEVGRLLQAIDEYPGTQVVRCALQLAPLFFVRSGELRNARWDEFDLVNREWKI 265 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAIL-KQIKQFYGAHDLIFIGDHDSHKPM 293 P ER + + R ++ H+VPL+TQA+ IL ++++ G L+F G + + Sbjct: 266 PVERMKMRQDEKRARQGQVG--HIVPLATQAVKILEEELRPLTGRCALVFPGLRSRDRAI 323 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S+ T+ +ALR MGY E+ HG R MA + L G S +ERQ++H RN +R Y Sbjct: 324 SDATLTNALRRMGYTGD-EMTIHGLRHMASTLLHGLGFQSL-VIERQLAHKDRNRIRGVY 381 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRER---FISPFEY 387 ++A++LEERR M+Q WAD+L + + P Sbjct: 382 -NQADYLEERRRMMQSWADYLGQLKAGKAEKVVPINR 417 >UniRef50_A4JAY4 Phage integrase family protein n=22 Tax=Bacteria RepID=A4JAY4_BURVG Length = 405 Score = 399 bits (1026), Expect = e-110, Method: Composition-based stats. Identities = 152/391 (38%), Positives = 223/391 (57%), Gaps = 19/391 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + +GSK WRL+YR+ GK+ +L G YP +LADAR RRDEA++LLA G +P ++ Sbjct: 30 LYLDLRSSGSKKWRLKYRFNGKENLLTFGDYPATSLADARSRRDEAKRLLAEGKNPAFER 89 Query: 61 KNDKV--EQSKARTFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 +K + TF+ VA+EW+ WS HA+RV K L+ +F +G+R I+ + Sbjct: 90 DVEKQTRAIAAQNTFEAVALEWYEAQQATWSASHANRVKKQLDREVFPLIGQRPISSIGA 149 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 DLLA ++ +E E A + Q + RYAV + + +P+ ++ GA+ + +H Sbjct: 150 PDLLAVVRRIEGREAFETARKTLQTCGQVFRYAVATSRAERDPSPDLRGALKAVPVKHMA 209 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + +PELL I SY G P TR A+ L F+R+ ELR A W+EID E W IP E Sbjct: 210 RVGESELPELLRSIASYEGEPETRLALRFLALTFVRTIELRQAEWTEIDLERREWRIPAE 269 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 + KMR H+VPL+ QA+A+L +++ G +F + MSENT Sbjct: 270 K------------MKMRRVHIVPLAEQAIALLSELRALTGHRRWLFPNSRRPLQQMSENT 317 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + AL MGY + + GHGFR +A + L E G ++ D +ERQ++H ++ VRAAY H A Sbjct: 318 ILYALYRMGY--RSRMTGHGFRGLASTILNEKG-FNSDWIERQLAHSEQDGVRAAYNH-A 373 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFEYA 388 E+L ER M+QWWAD+LD I P A Sbjct: 374 EYLSERHRMMQWWADYLDKQSGAQIIPIAAA 404 >UniRef50_D0BVL9 Phage integrase n=2 Tax=Acinetobacter RepID=D0BVL9_9GAMM Length = 441 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 183/393 (46%), Positives = 257/393 (65%), Gaps = 5/393 (1%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 + L + +GSK WR +Y R GK ++ LG +P ++L AR +R E LLANG+DP + Sbjct: 31 LILFIRKSGSKVWRFKYKRANGKDGLMTLGNFPALSLKTARDKRRELETLLANGIDPIEY 90 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNK---KWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 + K + F+ +A EWH K +W + A R LK++E+ +F LG++ I +K Sbjct: 91 SEIQKAKLDNKYNFESIAREWHTAYKNTGRWGTETAERALKNMEEYVFPKLGKKPIDAIK 150 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA-SCNRQH 175 ++L+ IK++E G EV + +QR T+I +A+ G I+ NPA + S +H Sbjct: 151 PKELIQVIKSIEDLGYTEVVKKTRQRLTSIFAFAMSKGFIESNPAYGLQDIFILSKKTKH 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 P L L+R+PEL K+ S TG P+TR +E L F RSSE+RFARW E DFE +IWTIP Sbjct: 211 HPQLPLERLPELQAKLASDTGHPITRLCVEFALHTFARSSEIRFARWKEFDFENAIWTIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 P R+ + G K+SHRG+KM+T HL+PLS QALAI+K+I ++ G +F + D H MSE Sbjct: 271 PTRDFVEGYKYSHRGAKMKTPHLIPLSNQALAIIKEIYKYSGHTQNVFPKNGDPHGFMSE 330 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 +T+N LR +GYDT EVCGHGFR MAC++L++S L+ +DAVE+QMSH RN+VR AY H Sbjct: 331 STINKTLRRLGYDTNTEVCGHGFRGMACAALIQSKLFQKDAVEKQMSHQERNNVRLAYTH 390 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFISPFEYA 388 KAE LEER+ ML WW+ +LDV +E ISP++Y Sbjct: 391 KAEFLEERKTMLNWWSSYLDVTKETSISPYDYT 423 >UniRef50_C6MJ08 Integrase family protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MJ08_9PROT Length = 418 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 156/388 (40%), Positives = 228/388 (58%), Gaps = 19/388 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M++ V PNG+KYWR+ YR+ KQK LALGVYP++TLADAR RR+EARKLLANG DPG K Sbjct: 26 MYIEVKPNGAKYWRMAYRFADKQKTLALGVYPDVTLADARDRRNEARKLLANGADPGAVK 85 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 ++ K + + + +F+ +A E+H WS +HA +K+LE +F G I+E+ Sbjct: 86 QSQKKQAKIAASNSFELIAREFHSLKTPMWSTNHAADWIKTLEREIFPKFGNYPISEIDA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV-ASCNRQHR 176 +L I+A+E EVAAR+ QR A+ YA+ +G +NPA E+ GA+ +H Sbjct: 146 PAVLDAIRAIESRDAHEVAARVLQRVRAVCAYAIATGRARHNPASEIKGALAPQPKIKHF 205 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 AL K +P+ L + +Y PLT++A L +L F+R+ E+R A+W E D +A +W IP Sbjct: 206 AALTEKELPDFLRAVAAYPCYPLTKYATALLMLTFVRTGEVRGAKWCEFDLDAKLWKIPA 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER K R H+VPL+ QA+ IL ++ G + +F + K +SEN Sbjct: 266 ER------------MKSREPHIVPLAKQAIEILGELHPLTGHGEHLFPNRTGNGKVISEN 313 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 TV + +GY K + GHGFRT+A + L G+ D +E Q++H N+ RAAY ++ Sbjct: 314 TVLKVIERLGY--KGRMTGHGFRTIASTYLNGVGMIRPDVIEAQLAHTEANATRAAY-NR 370 Query: 357 AEHLEERRLMLQWWADFLDVNRERFISP 384 A ++E R M+Q+WAD LD P Sbjct: 371 ANYMEYRAAMMQFWADTLDAMEAGITLP 398 >UniRef50_B8J055 Integrase family protein n=3 Tax=Desulfovibrio RepID=B8J055_DESDA Length = 402 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 138/388 (35%), Positives = 223/388 (57%), Gaps = 18/388 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L G K+WR++YR GK+K L+ G +P+I+L +AR RDEA++ L +DP +K Sbjct: 30 LYLETSVAGGKHWRMKYRVNGKEKRLSFGPWPDISLKEAREMRDEAKRQLRESLDPSAEK 89 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K K EQ+ A TF+++A+E+ + W+ H V L +++ A G + IA + +D Sbjct: 90 KKAKQEQA-APTFRDIALEYVEHQRSVWAASHTRTVEGRLALDVYPAFGAKPIAAVTPQD 148 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +LA ++ +E E A+R+ + I +YAV GL++ +P +++ A+ + A+ Sbjct: 149 ILAMLRKIEERRAFETASRVLGFCSLIFKYAVTLGLVEADPCRDLRPALKPYAKGQLAAI 208 Query: 180 E-LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 K + L+ ID Y G + R A+ + L F R E+R W+EI+FE WTIP E+ Sbjct: 209 TKPKEVGALMRAIDDYKGSVVVRAALLFSALTFCRPGEIRHVEWAEINFEREEWTIPAEK 268 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K RT H VPLS QAL +L I + G+ +F +++P+SEN V Sbjct: 269 ------------MKGRTEHRVPLSRQALEVLHGIMPYTGSAKYVFPTPRSNNRPLSENGV 316 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 SALR MGY TK ++ HGFR+MA + L E G DA+E Q++H + +RA Y ++AE Sbjct: 317 LSALRNMGY-TKEQMTAHGFRSMASTLLNELG-HRPDAIEAQLAHKGADKIRATY-NRAE 373 Query: 359 HLEERRLMLQWWADFLDVNRERFISPFE 386 +++ERR ++Q WAD+L+ + + + P + Sbjct: 374 YMKERRNLMQAWADYLEDLKMQSMQPGQ 401 >UniRef50_C0VMW7 Phage integrase n=2 Tax=Acinetobacter RepID=C0VMW7_9GAMM Length = 419 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 145/386 (37%), Positives = 219/386 (56%), Gaps = 19/386 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+G ++WRL+YR+ G++ L +G YPEI+LA AR RDEAR L + +DP K Sbjct: 45 LYLEVTPSGGRFWRLKYRFNGRESTLTIGSYPEISLAQARRARDEARIQLYSNIDPNAVK 104 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 + ++ FK +A+EW K E R L E +LF ALG I ++K +D Sbjct: 105 NQRLQQTDESILFKSLAMEWMEDRKAVIKETTYLRDLSVFEKDLFPALGNMPIDQIKGKD 164 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +LA K +E G LE+A R T I R+A++ G+++ +P + A+ +H L Sbjct: 165 VLACAKKIEARGALEMAKRSIPLTGRIFRFAIRKGIMENDPTPHLQEALKPRKVKHMARL 224 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 ++ P L ++D Y G P+ + AI+L L F+R++ELR W EIDFE +W IP ++ Sbjct: 225 DILEFPPFLERMDRYHGSPMIKTAIQLMTLTFVRTAELRMMEWDEIDFETKLWRIPADK- 283 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 KM H+VPLS QA+ +++Q++ G +F H + KPMS N + Sbjct: 284 -----------MKMAQPHIVPLSKQAIELIEQLRPLTGNKQYVFYN-HSTAKPMSSNALL 331 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 +R MGY+ K + GHGFR +A ++L E G + DA+E Q++H N+V AY H A+H Sbjct: 332 CVIRTMGYNGK--MTGHGFRGLASTTLHEQG-YMHDAIEIQLAHRVGNAVSQAYNH-AQH 387 Query: 360 LEERRLMLQWWADFLDVNRERFISPF 385 L+ R M+Q W+DF+D R I PF Sbjct: 388 LDYRIKMMQEWSDFIDGLR-NKIVPF 412 >UniRef50_A1VQL7 Phage integrase family protein n=2 Tax=Burkholderiales RepID=A1VQL7_POLNA Length = 413 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 149/394 (37%), Positives = 216/394 (54%), Gaps = 14/394 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M+LLV G KYWR+ YR+ GK+K LALGVYP ++LA+AR RD+ARKLLA +DP K Sbjct: 28 MYLLVTKAG-KYWRMNYRFAGKRKTLALGVYPAVSLAEARQGRDKARKLLAQDIDPSAAK 86 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + D+ + A TF+ VA E+H WSE HA + L+ E LF +G ++ +K Sbjct: 87 QEDRQATATAAANTFEAVAREFHALKAGGWSEGHATKWLRMNELYLFPHIGTLPLSTIKA 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 LLA ++ VE G L A LQ + RY VQ+G + NP ++ GA+ +H Sbjct: 147 PTLLAALRKVEKKGILSTAQDLQAMAGQVFRYGVQTGRCESNPGVDLKGALQPHIAKHFA 206 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A L+ +L ID+YTG+P T A++L+ L F R +R W+ ID + + TIP Sbjct: 207 AILDPVEAGAMLRAIDAYTGQPETLAALKLSALFFQRPGNIRAMEWAWIDLDGQMLTIPA 266 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 + + + H VPL+ QAL +LK IKQ G +F G +PMS+ Sbjct: 267 KSMKSSKHEKA-----NGKPHTVPLARQALDVLKSIKQLTGHGRYVFPGARTGERPMSDG 321 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESG-LWSRDAVERQMSHMARNSVRAAYIH 355 T+N+ALR + Y V HGFR MA + + E +D VE Q+ H + + +AY Sbjct: 322 TINAALRRLDYGNNEHV-AHGFRAMARTMMAERLSGIPQDMVEAQLGHGKKGPLGSAY-D 379 Query: 356 KAEHLEERRLMLQWWADFLDVNRER-FISPFEYA 388 ++E+L +R+ M+Q WAD+LD R + F+ A Sbjct: 380 RSEYLPQRQQMMQTWADYLDKLRTGAEVIQFKAA 413 >UniRef50_C9NQJ4 Phage integrase n=6 Tax=Gammaproteobacteria RepID=C9NQJ4_9VIBR Length = 415 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 132/388 (34%), Positives = 206/388 (53%), Gaps = 21/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKM--LALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L + PNGSK+W L Y +K L+LG YP+++LA+AR EA++LLA G+DP + Sbjct: 31 LRLRIKPNGSKHWILNYYRPSNRKRANLSLGKYPDLSLANARKMTLEAKELLAQGIDPQE 90 Query: 59 KKKNDKVEQSK--ARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++K ++EQ TF V +W K + D+A + +SLE ++F L + + ++ Sbjct: 91 ERKRHQLEQKANHEHTFINVTTKWFEIKKDDVTPDYAVDIWRSLELHIFPQLSDVPVRDI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 ++ +K +E G LE RL QR +M YA GL+ NP + A +++ Sbjct: 151 TAPQVIELLKPIEAKGSLETVKRLAQRLNEVMNYATNCGLVQANPLTGIKAAFKKPKKEN 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 AL +PEL+ I + + + TR IE L R SE ARW EID++ +WTIP Sbjct: 211 MAALTPAELPELMGAIANASIKRTTRCLIEWQLHTMTRPSEASGARWEEIDWDEKVWTIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 PER K R H +PL+ Q L +L+ IK G + IF D D KP + Sbjct: 271 PER------------MKKRREHRIPLTEQMLELLEVIKPISGHREFIFPSDRDPKKPCNS 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T N AL+ MG+ + HG R++A ++L E G + D +E ++H N VR+AY + Sbjct: 319 QTANMALKRMGFAG--RLVSHGLRSLASTTLNEQG-FEPDLIEAALAHADDNQVRSAY-N 374 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFIS 383 + ++LE RR M+ WW+ ++ + +S Sbjct: 375 RTDYLERRRPMMCWWSGHIEEAAKGSLS 402 >UniRef50_Q5P090 Integrase n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P090_AZOSE Length = 402 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 129/392 (32%), Positives = 199/392 (50%), Gaps = 20/392 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WR ++R GK+ + A+G YP ++LADAR RDEAR L+ G +P + Sbjct: 26 LYLEVTPAGGKLWRYRFRLAGKENVFAIGAYPRVSLADARKARDEARDLVKQGFNPSHYR 85 Query: 61 KNDKVE--QSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K TF VA EW+ + WS+ H H V L+ ++ +G+ I + + Sbjct: 86 QQAKQAVIDENLNTFAPVADEWYQSKVDSWSKGHRHHVRTILDKDILPRIGKLPIRSITS 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 L +K + G A +Q ++ A+ + D NPA+ + +A C +H Sbjct: 146 PLLHDVMKKIVARGATTRAILARQIMGSVFNLAILTHRADTNPAEPLKRQIARCVTEHHR 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 LE + + + L K+ YTG TR A++L +L +R E+ ARW+E D + WTIP E Sbjct: 206 HLEERDVGDFLRKLSDYTGHATTRIALQLLMLTAVRPGEVCGARWAEFDIDGQNWTIPKE 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R H+VPLS QA+ +LK+++ G +F + M + Sbjct: 266 R------------MKTRKPHIVPLSNQAVDLLKELEPITGDTAFLFPSQGTKTQTMPTQS 313 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + +A+ +GY K HG R + L G ++ D +ERQ++H N VRA+Y H Sbjct: 314 IRNAVVKLGYADK--FSPHGARGTFSTMLNGRG-YNSDWIERQLAHDEGNRVRASYNH-M 369 Query: 358 EHLEERRLMLQWWADFLDVNRER-FISPFEYA 388 ++L ERR MLQ WAD LD R + PF+ + Sbjct: 370 QYLPERRKMLQEWADLLDELRTGAKVLPFQRS 401 >UniRef50_B9MGW9 Integrase family protein n=1 Tax=Diaphorobacter sp. TPSY RepID=B9MGW9_DIAST Length = 428 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 139/401 (34%), Positives = 225/401 (56%), Gaps = 24/401 (5%) Query: 1 MHLLVHPNGSKY-WRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++LL++ NG K+ WR Y+ +GK+K ++LG YP +L+ AR + + AR+L+A G+DP Sbjct: 29 LYLLLYVNGGKHGWRFDYKVQGKRKTISLGTYPATSLSLARAKANAARELVAAGIDPSAD 88 Query: 60 KKNDKVEQSKAR--------------TFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLF 104 +K+ K + K TF+ VA EW +W+ +A +VL+ LE ++F Sbjct: 89 RKSKKAAEKKVHEDAKLVAAGKPLNGTFEAVAREWFEVRSPEWAAKYAEKVLRRLEADVF 148 Query: 105 AALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM 164 +G R + ++ +LLA ++ +E G +E A R + + I R+AV +GL + A+++ Sbjct: 149 PHIGIRPVGDVTAPELLAVLRRIEDRGVIETAHRAHESCSQIFRFAVGAGLAKGDVARDL 208 Query: 165 AGAVASCNRQHRPALE-LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWS 223 G + +H PA+ KR+ ELL D Y G + R A+ L ++ +R ELR ARW Sbjct: 209 KGLLRKPRTRHFPAILCPKRLGELLRACDGYVGTHVVRAALSLAPMLLLRPGELRHARWD 268 Query: 224 EIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF 283 EI+ + WTIP ER H+VPL QA+ +L+++ G +L+F Sbjct: 269 EINLNTATWTIPGERMKREREGKL-----NGMPHIVPLPRQAVQVLRELHPITGRGELVF 323 Query: 284 IGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSH 343 G+ H+PMSENTVN+ALR MG+ EV GHGFR A + L E + + +E Q++H Sbjct: 324 RGERHHHRPMSENTVNAALRAMGFGAD-EVTGHGFRATARTLLDERLGIASEIIEAQLAH 382 Query: 344 MARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISP 384 ++S+ AY ++ E+L +RR M+Q WA++L+ R + Sbjct: 383 SVKDSLGRAY-NRTEYLVQRRKMMQQWANYLEALRRGNATN 422 >UniRef50_A1BGX1 Phage integrase family protein n=25 Tax=root RepID=A1BGX1_CHLPD Length = 419 Score = 384 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 151/390 (38%), Positives = 221/390 (56%), Gaps = 22/390 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG--D 58 +HLLV +G K WR QYR++GKQK+LALG YPEI+LA+AR RR+EAR LLAN DP Sbjct: 31 LHLLVTTSGGKLWRFQYRFDGKQKLLALGQYPEISLANARKRREEARTLLANEQDPSEAK 90 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K A +F+ VA EW G N WS HA V+ LE ++F A+G + ++E+ Sbjct: 91 KAAKKAEALKDASSFELVAREWFGKNDPVWSPGHALTVMCRLEKDVFPAIGSKPVSEITA 150 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ--- 174 D+ + +E G +E A R++ + RYAV +G ++++P+ + R+ Sbjct: 151 SDIRTMLLKIEARGAVETATRIKIMCGQVFRYAVATGRLEHDPSAALKSREIFRKREIRH 210 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H + K + LL ID Y G + + A++LT L+F+R EL+ WS+IDFE ++W+I Sbjct: 211 HAAITDPKELAPLLMAIDEYQGTFVVKSALQLTPLLFVRPGELQNMEWSDIDFEEALWSI 270 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P ER KMR HLVPLS Q+L+IL+ + G +F G +PMS Sbjct: 271 PAER------------MKMRQPHLVPLSRQSLSILQGLHPATGHGRYVFTGR--GSRPMS 316 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 N++N+ALR +GYD+ V GHGFR A + L E + D +E Q++H R+ AY Sbjct: 317 NNSINAALRYLGYDSDT-VTGHGFRATARTILDEVLGFRVDLIEHQLAHAVRDPNGRAY- 374 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFISP 384 ++ L++RR M+Q WAD+L + P Sbjct: 375 NRTSFLDDRRQMMQAWADYLYSLKAGVKMP 404 >UniRef50_Q2T016 Site-specific recombinase, phage integrase family n=30 Tax=Bacteria RepID=Q2T016_BURTA Length = 438 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 147/385 (38%), Positives = 226/385 (58%), Gaps = 23/385 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V PNGS+YWR++YR++GK+K+ + GVYPE++LA AR ARKLLA G DP ++K Sbjct: 71 LYLQVMPNGSRYWRMKYRFDGKEKLASFGVYPEVSLAQARQACLAARKLLAAGTDPTEQK 130 Query: 61 KNDKVEQS--KARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K ++ + +F+ VA EW + K W+E +A++V+ SLE + F +G + + +++ Sbjct: 131 REIKRARAIEASSSFEAVAREWFESQKDGWTEVYANKVINSLEVDAFPRIGSKPLRDIEA 190 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN---RQ 174 D+L ++A+E G E A R+ QR+ A+ +Y + +G NPA ++ + Sbjct: 191 PDMLEIVRAIEARGVRETAKRVLQRSRAVFQYGIMTGRCSRNPAADIDAETVLKKGQGVK 250 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H ++ IP+L+ I +Y+G +T+ A+ L F R++E+ A W E D A+ W I Sbjct: 251 HMARVKPVEIPQLMRDIAAYSGDRVTQLALRFMALTFTRTTEMINAEWDEFDERAAEWRI 310 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 PP+R KMR H+VPLS QAL +L +++ G L+F +S Sbjct: 311 PPDR------------MKMRDPHIVPLSRQALEVLAALRELNGNQRLVFYSVQGRS-HIS 357 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 NT+ AL MGY K + GHGFR +A + L E G +SRD V+RQ++H RN V AAY+ Sbjct: 358 NNTMLYALYRMGY--KSRMTGHGFRGLAATVLRELG-YSRDVVDRQLAHAERNQVTAAYV 414 Query: 355 HKAEHLEERRLMLQWWADFLDVNRE 379 H AE+L ERR M+Q WAD+L Sbjct: 415 H-AEYLPERRKMMQHWADYLTQTAN 438 >UniRef50_Q6AR70 Probable prophage integrase n=1 Tax=Desulfotalea psychrophila RepID=Q6AR70_DESPS Length = 399 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 140/391 (35%), Positives = 211/391 (53%), Gaps = 26/391 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + V +G K W +YR + KQ+M LG YPE++L AR EAR L+ G +P ++ Sbjct: 24 LSFEVTKSGVKRWLYRYRLDDKQQMCVLGRYPELSLEQARKIHREARALVREGCNPARER 83 Query: 61 KNDKVE---------QSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGER 110 + K E ++++F+ +A+EW NK WS H VL SL +N+F+A G Sbjct: 84 RRKKQEVISKEKAERDDRSKSFEYIALEWIENNKESWSPSHQQAVLASLRNNVFSAFGNT 143 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 + + D+L I+A+E G LE+ ++ QRT A+ RYA+Q+G YNPA +M GA+ + Sbjct: 144 PVDTITPPDVLRTIRAIENRGSLEIVRKVLQRTNAVFRYAIQTGRATYNPAADMQGALKA 203 Query: 171 CNRQHRPALELKRIPELLTKI-DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 +H PA+ + +LL I + T+ AI+ T L R E+R ARW E++ + Sbjct: 204 KTVEHMPAVFDSELAQLLQDISSNQKIHVTTKLAIQFTALTACRGGEVRNARWQEVNLDT 263 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 + W IP ER KMR H+VPLS QALAIL + +G +F D Sbjct: 264 NEWHIPAER------------MKMRRAHIVPLSIQALAILHRAGALWGEDGFVFPSIRDR 311 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 KPMS+N + A R MGY K HGFR+ S E ++ + +E+ ++H +N V Sbjct: 312 SKPMSDNAMGKAFRDMGYRGKA--TPHGFRSSFSSMAHEQSGFASEVIEKSLAHEEKNKV 369 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 + AY ++AE+LE+RR +LQWW + L + Sbjct: 370 KGAY-NRAEYLEQRRELLQWWGEKLHRLENQ 399 >UniRef50_A7MWW9 Putative uncharacterized protein n=1 Tax=Vibrio harveyi ATCC BAA-1116 RepID=A7MWW9_VIBHB Length = 410 Score = 380 bits (976), Expect = e-104, Method: Composition-based stats. Identities = 116/379 (30%), Positives = 199/379 (52%), Gaps = 21/379 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L + PNG+K W Y + K+K + LG YP+++LA AR +R R+L+A G+DP Sbjct: 31 LLLRIMPNGTKSWLFNYIHPSTKKRKNIGLGKYPDVSLATAREQRQTMRELVAKGIDPKT 90 Query: 59 KKKNDKVEQ--SKARTFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + N + + + T VA EW S D+A + +SLE ++F LG+ + E+ Sbjct: 91 HRDNQQTAEKLAAQDTLLHVAKEWFELKQHSVSSDYADDIWRSLELHIFPNLGQLPLREI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 ++A ++ +E G LE R+ QR +M YAV G ++ NP + +H Sbjct: 151 LAPTVIAQLRPLEAKGSLETVKRVCQRLNEVMTYAVNCGKVEANPIANIKQVFKKPKVKH 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 + + + LL + + +TR A E L R SE A W+EIDF +WTIP Sbjct: 211 MKTITPQDLSFLLESMSKVNIKLVTRCAFEFQLHTLTRPSECVKAEWNEIDFAQKLWTIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 ++ KM+ H +PLS + +L+ +K H +F D + M+ Sbjct: 271 KDK------------MKMKRDHKIPLSDPVIKLLQFMKPISFEHKYVFPSDAKAGSHMNS 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 +VN+A++ G+ K + HG R++ ++L E G +++DA+E ++H+ +N++R Y + Sbjct: 319 QSVNAAIKRAGFSGK--LVSHGMRSIGSTALNEQG-FNKDAIELCLAHVDKNTIRDIYNN 375 Query: 356 KAEHLEERRLMLQWWADFL 374 AE+LEERR ++QWW++++ Sbjct: 376 -AEYLEERRNVMQWWSEYI 393 >UniRef50_Q3JN19 Prophage CP4-like integrase n=62 Tax=Proteobacteria RepID=Q3JN19_BURP1 Length = 462 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 144/390 (36%), Positives = 215/390 (55%), Gaps = 20/390 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M LLV PNG KYWRL YRY GKQK LALGVYPE++LA AR RR EAR+ LA G DPG+ K Sbjct: 83 MFLLVQPNGGKYWRLAYRYLGKQKTLALGVYPEVSLALARQRRAEAREQLAKGADPGETK 142 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K D+ A +F+ VA+ W + R L L++++F LG+R IA++ Sbjct: 143 KADRRAARLAADNSFEVVALAWLEERRPYVEPRQHERTLVRLKNDVFPWLGKRPIADIDA 202 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++LA +K ++ G A R++ + Y ++ G NPA + A+ H Sbjct: 203 PEILAVLKRIDSRGARFTAHRIRSEIGRVFVYGIKEGHCKANPAASLVKAIPPAQTTHFA 262 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 ++ E ++ E+L D ++G A++L ++F+R ELR A WS D E + W Sbjct: 263 SITEPAQVGEMLRAFDGFSGTFPVLCALKLAPMLFVRPGELRKAEWSHFDLEKAEWRY-- 320 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +K +T HLVPL+TQA+ ILK++ G+ +F G +PMS+ Sbjct: 321 ------------LVTKTKTEHLVPLATQAVKILKELHAVTGSGQYVFPGARSKQRPMSDA 368 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 +N+ALR +GYDT+ E+ GHGFR MA + L E + +E Q++H +++ AY ++ Sbjct: 369 AINAALRRLGYDTRTEITGHGFRAMARTILHEELEQKPEVIEHQLAHTVPDTLGRAY-NR 427 Query: 357 AEHLEERRLMLQWWADFLDVNR-ERFISPF 385 + ++ER M+Q WADFLD + I P Sbjct: 428 TKFIKERCAMMQKWADFLDQLKLGAKIIPI 457 >UniRef50_C3K287 Putative phage integrase n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K287_PSEFS Length = 401 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 135/383 (35%), Positives = 202/383 (52%), Gaps = 11/383 (2%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V PNG +YWRL+YR+ GK+K LALGVYPE+ L +AR +RD+AR LA+G DP ++ Sbjct: 26 LYLEVQPNGGRYWRLKYRFLGKEKRLALGVYPEVGLQEARRKRDDARVQLASGQDPSLQR 85 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + KV + TF+ VA +W + W ++ V + LE N F LG+ I+ + T Sbjct: 86 RMAKVVSQLDHQHTFESVATQWLNIRESSWDPEYTRTVRQRLELNAFPWLGKLPISSIST 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 L+ ++ + G E A R+ Q I +A +G+ N ++ + + +H Sbjct: 146 PMLVENLQRIIKRGARETARRVAQIYKQIFEFAEAAGITPPNQIGNLSRTLPAKRVKHFA 205 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A + +++ LL +DSY G A++L L+F R +LR WSE++ +A W IP Sbjct: 206 AVTDPEKLGALLKALDSYAGTMPVCCALKLAPLLFCRPGDLRHMEWSEVNLDAGEWLIPG 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 + + R HLVPLS QA+A+L ++K G H F +PMS N Sbjct: 266 HKMKG-----LTATKQDRPDHLVPLSQQAIAVLHELKPLTGRHRYAFPSARGGDRPMSNN 320 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 V SALR M E+ GHGFR A + E + D +E Q++H +N + AY + Sbjct: 321 AVLSALRRMDISGD-EMTGHGFRATARTIGAEVLGFRPDLLEHQLAHTVKNPLGRAY-DR 378 Query: 357 AEHLEERRLMLQWWADFLDVNRE 379 L ERR M+Q WADFLD + Sbjct: 379 TSFLPERREMMQIWADFLDSIKR 401 >UniRef50_P32053 Prophage CP4-57 integrase n=104 Tax=Gammaproteobacteria RepID=INTA_ECOLI Length = 413 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 133/395 (33%), Positives = 211/395 (53%), Gaps = 21/395 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + LL+ +GSK W+ +Y ++ + G YP ++L+DAR R E++ LLA +DP + Sbjct: 31 LTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPAVSLSDARKLRAESKVLLAKDIDPQE 90 Query: 59 KKKNDKV--EQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 +K +++K TF VA W K +ED+A + +SLE ++F A+G+ +I E+ Sbjct: 91 HQKEQVRNSQEAKTNTFLLVAERWWNVKKTSVTEDYADDIWRSLERDIFPAIGDISITEI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 K L+ ++ V+ G LE RL QR +M YA +GLID P+ + A +++ Sbjct: 151 KAHTLVKAVQPVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKN 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 P++ ++P+L+ + + + TR LL R +E ARW EIDF AS W IP Sbjct: 211 MPSIRPDQLPQLMHTMRTASISMSTRCLFMWQLLTITRPAEAAEARWDEIDFNASEWKIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R KM H VPLS ALAIL+ +K G + IF ++PM+ Sbjct: 271 AAR------------MKMNRDHTVPLSDGALAILEMMKPLSGGREFIFPSRIKPNQPMNS 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 TVN+AL+ G + HG R++A ++L E G + D +E ++H+ +N VR AY + Sbjct: 319 QTVNAALKRAGLGGV--LVSHGLRSIASTALNEEG-FPPDVIEAALAHVDKNEVRRAY-N 374 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFISPFEYAKI 390 ++++LE+RR M+QWWAD + I +KI Sbjct: 375 RSDYLEQRRPMMQWWADLVKAADSGSIVLTHLSKI 409 >UniRef50_C0N6F7 Site-specific recombinase, phage integrase family protein n=2 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6F7_9GAMM Length = 401 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 146/383 (38%), Positives = 224/383 (58%), Gaps = 19/383 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V GSK WR ++ +EG ++ L+LG YP+I+L +AR +RD+ RK + G+DP ++ Sbjct: 34 LYIEVPLKGSKRWRYKFYFEGTERKLSLGTYPKISLKEARQKRDDIRKKIDAGIDPSYER 93 Query: 61 KNDKV-EQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + ++ T++EVA EWH NK W++ +A L LE N F +G+R I ++ Sbjct: 94 RKKRLNASVSGNTYEEVAREWHARNKANWTKKYADLTLSRLEQNAFPWIGDRQIDKITAP 153 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR-P 177 +LL IK V G +E A R+++ + I ++A+ +G+ + NPA + GA + +H Sbjct: 154 ELLTVIKRVFDRGAIETAHRIRRLSNTIFKFAIANGMTETNPAAALEGAFPTQKVKHHSA 213 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 E K++ ELL ID Y+G TR A++L+ L+ R +R A W +ID E S+W I Sbjct: 214 VTEPKKVAELLRAIDGYSGHFATRCALKLSALVMNRPINIRAAEWGDIDLENSVWRIHMG 273 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R TH++PLS QAL IL++I+ G +F +PMSENT Sbjct: 274 R------------MKSRRTHIIPLSRQALEILEEIRPLTGEGKYVFPCMRSKARPMSENT 321 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + +ALR MG+ E+ HGFR MA + L E G ++ D VERQ++H+ +S R+AY H A Sbjct: 322 ICAALRRMGFSG-EEMSAHGFRGMASTLLHEKG-YNSDWVERQLAHID-SSTRSAYNH-A 377 Query: 358 EHLEERRLMLQWWADFLDVNRER 380 +HL++R MLQ WAD+LD R Sbjct: 378 QHLDDRAKMLQEWADYLDELRIN 400 >UniRef50_A1WLK0 Phage integrase family protein n=4 Tax=Burkholderiales RepID=A1WLK0_VEREI Length = 421 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 143/384 (37%), Positives = 215/384 (55%), Gaps = 11/384 (2%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+GSK W +YR++G++K LALGVYP++ L DAR RD+ARK GVDP ++ Sbjct: 27 LYLEVSPSGSKRWFWKYRFDGREKRLALGVYPDVPLKDARTARDDARKQHQRGVDPVLER 86 Query: 61 KNDKVEQSKAR--TFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +++ TF+ VA E+H T K+ WS ++A R L+ LE ++F LG+ + ++ Sbjct: 87 QLERLSNRSDPEATFEVVAREFHTTKKRSWSLEYARRWLERLEKDIFPWLGKLPLKQISA 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 LL ++ VE G E+ L + RY + +G D N A ++ GA+ +H Sbjct: 147 PMLLQALRRVEARGARELPHSLLEACGQTFRYGIATGRCDRNSAADLRGALRPVLTKHMA 206 Query: 178 A-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A LE K + EL+ I Y G+ TR A+ L+ L+F R +R W E+D EAS+W IP Sbjct: 207 AILEPKEVRELMLAIRGYDGQLTTRVALYLSALLFQRPGNIRQMEWEEVDLEASMWKIPS 266 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 E+ + HLVPL+ QA+A+L+ ++ G +F +PMSEN Sbjct: 267 EKMKRKKSEKL-----NGRPHLVPLARQAVAVLRDLQPLTGRGRYVFPAVVSPKRPMSEN 321 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 TV ALR MG+D + HGFR MA + LVE S D +E Q++H + +AY + Sbjct: 322 TVRVALRRMGFDNDT-MTPHGFRAMARTLLVEWLNISSDVIEVQLAHRKSGPLGSAY-DR 379 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 AE + +R+ M+Q WAD+LD E Sbjct: 380 AEFMVQRQTMMQSWADYLDALCEA 403 >UniRef50_B1Y3M2 Integrase family protein n=4 Tax=Proteobacteria RepID=B1Y3M2_LEPCP Length = 433 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 148/406 (36%), Positives = 225/406 (55%), Gaps = 24/406 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P GS +WR +YR+ GK+ ML+LG YP+ +L+ AR RRDEAR+ LA G++P + + Sbjct: 34 LRLDVQPTGSAWWRWRYRFGGKEGMLSLGTYPDTSLSAARGRRDEARERLAAGINPSEAR 93 Query: 61 KNDKVEQSKAR--------------TFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFA 105 K+DK Q+ TF+ A EWH WSE HA +VL L ++LF Sbjct: 94 KDDKAAQALKAEAARLAAAGLPGPGTFEHAAREWHARMAPSWSEGHAGKVLALLVNDLFP 153 Query: 106 ALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA 165 +G +AEL +LL + +E G +E A R + A+ R+ VQ+G D +P +++ Sbjct: 154 FIGTSALAELTPPELLKHARRIEARGAVETAYRALKAAGAVFRHGVQNGYCDSDPTRDLK 213 Query: 166 GAVASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE 224 GA+ +HR A+ + R+ ELL ID Y G P+ R A+ L L+F+R ELR A W+E Sbjct: 214 GAIVLPVPEHRAAITDPARLGELLRAIDGYQGTPVVRSALALAPLVFLRPGELRKAEWAE 273 Query: 225 IDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI 284 D +A++WTIP R H+VPL+ QA AIL+ ++ GA +F Sbjct: 274 FDLDAAVWTIPAARMKGRLKAKL-----NGPDHVVPLAPQAAAILRDLQPLTGAGKYVFP 328 Query: 285 GDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM 344 +P+S+N V SALR MG+D K E+ GHGFR A + E +E Q++H+ Sbjct: 329 NPLTPDRPLSDNGVLSALRRMGFD-KDEMTGHGFRATARTIAAERLKIDPVVLEAQLAHV 387 Query: 345 ARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER-FISPFEYAK 389 +++ AY ++ ++L++RR M+ WAD+LD R+ + + Sbjct: 388 VADALGRAY-NRTQYLDQRRDMMTRWADYLDRLRKGAEVVDLTSKR 432 >UniRef50_Q93UI5 Integrase-like gene 1 n=1 Tax=Escherichia coli RepID=Q93UI5_ECOLX Length = 401 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 148/388 (38%), Positives = 212/388 (54%), Gaps = 21/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M+L + +G +YWR++YR+ GK+K+LA GVYP + + +AR + A++ L+ G DPG K Sbjct: 23 MYLQITASGGRYWRMKYRHGGKEKLLAFGVYPLVGIKEARDKLFYAKQALSRGEDPGATK 82 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K EQ A TFK VA +W +W R SLE +++ LG I+ + Sbjct: 83 KLAKFQAEQDAANTFKAVAEDWLDHQAGRWEAITLSRTRASLEADVYPTLGSLPISSITP 142 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA--VASCNRQH 175 R ++ +K +E G E+A R+ QR +I RY I+ N ++ + + QH Sbjct: 143 RQVMDVVKKIEKRGASEIATRVLQRIKSIFRYGTTHQRIERNTMADLVPSEILKPRRVQH 202 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 R AL ++PE L K+ SY G P T A+ L +L R E+R ARW EID +A +W IP Sbjct: 203 RAALAPAQLPEFLKKLASYEGEPHTVNALHLLMLTAARPGEVRGARWDEIDLKAKLWRIP 262 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 PER KMR+ H+VPLS++A+A ++ ++ G DL+F KP+SE Sbjct: 263 PER------------MKMRSEHVVPLSSEAVAAIEAMRPLSGNRDLVFPSPFYPSKPLSE 310 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 NT NSA+ MGY HGFR + + ESG WS DA+ERQ++H RN VRAAY Sbjct: 311 NTFNSAMARMGYKYLA--TAHGFRALFSTVANESG-WSADAIERQLAHAERNQVRAAY-D 366 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFIS 383 + L ER M+ WWA +L + Sbjct: 367 RGVRLPERVKMMNWWAQYLAERKAGKAI 394 >UniRef50_D0W4G5 Site-specific recombinase, phage integrase family n=4 Tax=Neisseria RepID=D0W4G5_NEICI Length = 428 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 126/377 (33%), Positives = 206/377 (54%), Gaps = 14/377 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L ++ +G K WR + GK+K L++G YP ++LA+AR + AR++LA G DP + K Sbjct: 49 LYLYINTSGGKLWRFDFACNGKRKTLSIGKYPTVSLAEARETAETARRMLAAGQDPSEAK 108 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +K E+ A TF+ +A WH N +W E+HA RVL+ E ++F +G I E++ Sbjct: 109 QQEKEERKAAALNTFESIARRWHTDNLTRWKENHAARVLRYFETDVFPVVGAMPIQEIRV 168 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 + + +V G A ++++ A+ YA L + NPA + + S +RP Sbjct: 169 NHIKTLLDSVMARGVNNTAEKIREWAGAVFDYAALLELTESNPAHVLRRYIPSVPAGNRP 228 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 AL + + E ++ P R A+ L +L+F+R++ELR RW EIDF+A +W IP E Sbjct: 229 ALPREELTEFFCRLLLADIEPQNRIALMLIMLVFVRNTELRGGRWDEIDFDARLWVIPAE 288 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R + H VPL+ L +L ++K G +F +SENT Sbjct: 289 RMKHEKTAP-------KPPHTVPLADWTLELLAELKAITGDTPYLFPSRTKKDGFISENT 341 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + + MGY HGFR +A S L E G ++ DA+ERQ++H+ N +RAAY ++A Sbjct: 342 LGKIMNNMGYKGIA--TPHGFRALASSVLNEQG-FNPDAIERQLAHVEENRIRAAY-NRA 397 Query: 358 EHLEERRLMLQWWADFL 374 +++ ERR M++W++ +L Sbjct: 398 DYMTERREMMEWYSGYL 414 >UniRef50_B6WV41 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WV41_9DELT Length = 401 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 149/384 (38%), Positives = 225/384 (58%), Gaps = 18/384 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP-GDK 59 +++LV+P G K WRL+YR+EGK+++ A+G YP ++L +AR R A++++A GVDP + Sbjct: 28 LYVLVNPGGGKLWRLKYRFEGKERLFAIGTYPAVSLKEARARAVTAKEMIARGVDPCAAR 87 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K +++RTF+ VA EWH W+ +HA ++++ LE F LG R IAEL Sbjct: 88 KAAKAEAIARSRTFEVVAREWHKKKLAGWTPNHARQIIRRLETLAFPDLGSRPIAELGAP 147 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ-HRP 177 D LA + VE G LE A RL Q + RYA +G+I +PA + A+ + + H Sbjct: 148 DFLAVLGKVERQGHLETARRLAQICGQVTRYARLAGMIVADPASHLTEALTTKPVRLHAA 207 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 E + I LL ID Y G +A+++ +F+RSSELR A W+EID + + W IP E Sbjct: 208 ITEPREIGALLRAIDDYPGDVSVSFALKIMPYVFVRSSELRRATWAEIDLDRAEWLIPAE 267 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R KMR HLVPL+ Q + + + + G +L+F G + +S+ Sbjct: 268 R------------MKMRRPHLVPLARQVVGMFRALHAITGNRELVFPGTASVTRCISDVG 315 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + +ALR +GY + E+ HGFR+MA + L E G + D +E Q++H RNSVR AY ++A Sbjct: 316 LLNALRRLGY-GRDEMTVHGFRSMASTRLNEMG-YRPDVIEAQLAHAERNSVRDAY-NRA 372 Query: 358 EHLEERRLMLQWWADFLDVNRERF 381 +++EERR M+Q WAD+LD R+ Sbjct: 373 QYVEERRRMMQEWADYLDSLRDGE 396 >UniRef50_B4X5T7 Site-specific recombinase, phage integrase family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X5T7_9GAMM Length = 398 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 141/387 (36%), Positives = 213/387 (55%), Gaps = 23/387 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M L + P G K+WR +YR+ GKQK L+LG YP +L AR +R +AR+LLA+GVDP ++ Sbjct: 29 MFLEISPKGGKWWRFKYRFNGKQKRLSLGTYPSTSLKAARDKRQQARELLASGVDPAQQR 88 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTN---KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K +K+ A TF VA EW +KW+ + L++ L LG R I+E+ Sbjct: 89 KTEKLATETALRNTFAGVAEEWAQNKVRSEKWTPTTEKKRRIWLDNGLMPYLGSRPISEI 148 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 T +L ++ + + A RL+ + I +A+ +G D NPA + G +A +H Sbjct: 149 TTAELWGVLQHTQKTSGY-TANRLRGMASEIFNFAMATGRADNNPALPLQGQIAVKKEKH 207 Query: 176 R-PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 R LE + ++L ID T+ A L L+F+R ELR A WSEID + ++W+I Sbjct: 208 RLAILEPDEVGKMLRAIDGCQAAVTTKAAARLAPLVFVRPGELRHAEWSEIDLKKALWSI 267 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E+ KMR +H+VPLS QA+AILK+I+ G+ +F G +P+S Sbjct: 268 PAEK------------MKMRESHVVPLSRQAVAILKEIQPLTGSSGYVFEGTK-PGEPIS 314 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 +NT+N L+ +GY K + HG+R +A + L E D +E Q++H R++ AY Sbjct: 315 DNTLNKLLKALGYKGK--MTQHGWRAIARTLLDEVLDVRVDWIEHQLAHSVRDANGRAY- 371 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERF 381 ++ HLE R M+Q WAD+LD + R Sbjct: 372 NRTSHLEGRIGMMQLWADYLDKLKARK 398 >UniRef50_B0C8U1 Phage integrase family protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C8U1_ACAM1 Length = 399 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 133/386 (34%), Positives = 210/386 (54%), Gaps = 22/386 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + P G K+W+ +YR +GK+ ++G YPE+ L +AR + EAR+L+A G++P + Sbjct: 29 LFLQITPAGGKHWKYRYRIQGKESTFSIGSYPELGLGEARAKHLEARRLVAQGLNPTTEA 88 Query: 61 KNDKV--EQSKARTFKEVAIEWH-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K ++ + ++ TF+ VA EW N WSE + V L +L +LG R + E+ Sbjct: 89 KRLQLSLQLAQGNTFEFVADEWFSQKNAGWSESYRGIVRNRLNRDLNPSLGPRPVTEITA 148 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++LA I+AVE G +A + ++ YAV +G D N ++ GA+A + +HR Sbjct: 149 PEVLAVIRAVEARGANALAHKCLSIVRMVLGYAVATGRCDRNVVNDLGGALAPVDAKHRA 208 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ + KR+ EL+ I Y G + R A+ + L F+R ELR +WS+I++ W Sbjct: 209 AITDPKRVGELMRMIADYRGSMVVRAAMRMGALTFVRPGELRTMQWSQINWNTKEWRF-- 266 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA--HDLIFIGDHDSHKPMS 294 + SK T H+VPL+TQA+ IL+ ++ G +F + + MS Sbjct: 267 ------------QVSKTETDHIVPLATQAIEILQTLQLITGNGTSRYVFPSANSMTRHMS 314 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 N V +ALR MG TK E+ GHGFR MA + + E + + +E Q++H R + AY Sbjct: 315 NNAVLAALRAMGI-TKDEMSGHGFRAMARTLIAEELHYRPELIEHQLAHAVRGPLGRAY- 372 Query: 355 HKAEHLEERRLMLQWWADFLDVNRER 380 ++ E LEERR M+Q WAD+LD Sbjct: 373 NRTEFLEERREMMQAWADYLDELERD 398 >UniRef50_Q2N8A1 Symbiosis island integrase n=12 Tax=Bacteria RepID=Q2N8A1_ERYLH Length = 409 Score = 367 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 154/398 (38%), Positives = 226/398 (56%), Gaps = 24/398 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV G K WR++YR +G++K LA+G YPEI LA+AR RRD AR+ LA G DP +K Sbjct: 26 LFLLVERTGGKLWRMKYRIDGREKKLAIGRYPEIGLAEARRRRDAAREQLAQGKDPSREK 85 Query: 61 KNDKVEQS--KARTFKEVAIEWHGTNKK-----WSEDHAHRVLKSLEDNLFAALGERNIA 113 + K F +A E+ K W+ A R L L +++G IA Sbjct: 86 QRQKARAKLGAENNFASLAAEFCEKRKHDGSRAWAPATAKRCE-YLLSVLNSSIGHLPIA 144 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 +++ D+L ++ +E G+LE A R Q ++ RYAV + + +P +++ GA+ + Sbjct: 145 DIEPADILTAVRRIESKGKLESAKRTLQLAGSVFRYAVATARLKSDPTRDLRGALMNPTV 204 Query: 174 QHR-PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 H L+ ELL ID Y G+P+T+ A++L +F+R ELR A WSEIDF+ ++W Sbjct: 205 THYGAVLDPAGAGELLRAIDGYEGQPITKLAMQLAPHVFVRPGELRHAEWSEIDFDEALW 264 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 TIP + +KMR HLVPLS QA+AIL+ + G +F +P Sbjct: 265 TIPASK------------TKMRKDHLVPLSRQAIAILEMAHRLTGPDGYVFPSVRTRKRP 312 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 MS+NT+N+ LR +GY T E+ HGFR MA + L ESG W+ DA+E ++H + VRAA Sbjct: 313 MSDNTINAGLRRLGYATD-EMTAHGFRAMASTLLNESGKWNPDAIEGALAHGDSDKVRAA 371 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRER-FISPFEYAK 389 Y H+ H +ER M++WW+D+LD RE + P + AK Sbjct: 372 Y-HRGAHWKERVKMMKWWSDYLDQLREGAEVVPIKAAK 408 >UniRef50_A5V414 Phage integrase family protein n=1 Tax=Sphingomonas wittichii RW1 RepID=A5V414_SPHWW Length = 417 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 147/401 (36%), Positives = 228/401 (56%), Gaps = 23/401 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L+V P+GSK WRL+YRYEGKQK L LG +P++ +++AR+RR++ARKL+ G DP K Sbjct: 26 LTLVVQPSGSKVWRLKYRYEGKQKTLHLGHWPKVGISEARIRREDARKLIEEGTDPALVK 85 Query: 61 K----NDKVEQSKARTFKEVAIEWHGT--NKKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 + KV+ +F+ VA EW + S+ +++ L+ + ALG + I Sbjct: 86 RFGPVAAKVKIVAGNSFRAVAEEWLEKCEREGLSQVTLNKIRWLLDK-AYPALGSKPIEV 144 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 ++ D LA +K +E G LE A RL+ + I R+AV +G I+ + A ++ GA+A+ + Sbjct: 145 IRPLDALAVLKKLEAEGILESARRLRSVLSRIFRFAVATGRIERDVAADLRGAIATPKGK 204 Query: 175 HRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 + A+ + LL I++Y+G +T A+E + +F+R ELR A W E+D + +IW Sbjct: 205 NLAAITTAREAGVLLRAIENYSGHEITAIALECSAHLFVRPGELRQAEWPELDADEAIWA 264 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IPPE+ +KMR H VPLS Q + L ++ G +F + PM Sbjct: 265 IPPEK------------TKMRRPHWVPLSRQMMEKLHRLHDLTGGGKYLFPCLGNDDMPM 312 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 SENTVN ALR +G+ + ++ HGFR MA + L ESG W DA+ERQ++H+ N VR AY Sbjct: 313 SENTVNLALRRLGF-GQDQMTAHGFRAMAATLLNESGQWHPDAIERQLAHIETNEVRRAY 371 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERFISP-FEYAKINNP 393 + E+ ER M+QWW+D ++ R + + + P Sbjct: 372 T-RGEYWPERVRMMQWWSDHIEELRRAPLVQRGSFGSVPTP 411 >UniRef50_C6RSU9 Phage integrase family protein n=3 Tax=Acinetobacter RepID=C6RSU9_ACIRA Length = 426 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 133/389 (34%), Positives = 218/389 (56%), Gaps = 20/389 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LL+ NG+ WR Y K+ + +G YP ++LA AR RD+ R LLA G DP Sbjct: 40 LNLLIRKNGTVMWRFDYTRPVSKKRNTMTVGNYPAMSLAKAREYRDQFRALLAEGKDPQV 99 Query: 59 KKK--NDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 +K+ +K + TFK VA + + ++ +E R E L+ +G I+++ Sbjct: 100 EKQGVEEKERLKQQATFKSVAELY-KSKQRLAEATVKRNDGIFEK-LYRDVGNMPISDIT 157 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 RDL I+ E G +E A R++ + + + R+AV+ GL + + AQ++AG + + H Sbjct: 158 PRDLAKVIEKDENKGHIESAMRIRSKASQVFRFAVKMGLCERDVAQDLAGTITQREKNHY 217 Query: 177 PAL-ELKRIPELLTKIDSYTGRPL-TRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 AL + LL ID Y + + + A++L L+F+R ELR A+WS+I+FE + W+ Sbjct: 218 SALTDPFDFACLLFDIDHYESQLVHVKLALQLAPLVFVRIGELRNAKWSDINFETATWSY 277 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P + +K H+VPLSTQA+AILK+ F D +F D H+P+S Sbjct: 278 TPSKTS----------AKTGLDHIVPLSTQAIAILKEALNFTNNSDFVFPSRSDKHRPIS 327 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 + ++N ALR MGY K ++ GHGFR +A + L E + D +E+Q++H R+ AY Sbjct: 328 DMSINMALRRMGY-GKEDMTGHGFRAIARTLLDEVLEFPLDIIEQQLAHQVRDMHGRAY- 385 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFIS 383 ++ +HL++RR+M+Q W+D+ D + +FI+ Sbjct: 386 NRTKHLDKRRVMMQRWSDYCDELKAQFIA 414 >UniRef50_Q0AH02 Phage integrase family protein n=2 Tax=Nitrosomonas eutropha C91 RepID=Q0AH02_NITEC Length = 393 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 140/380 (36%), Positives = 215/380 (56%), Gaps = 21/380 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LL++P+GSK+WR +Y + K+ ML+LG YPE TLA AR D + +L G++P + Sbjct: 26 LTLLIYPDGSKHWRYRYLFNEKESMLSLGKYPETTLAQARSIHDGYKAILKQGINPSTHR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K + S +F+ VA W K +E H L+ +E ++F +G + + L Sbjct: 86 KEEKRKAIVSVENSFEAVARTWWMHWKHAKTERHVAYTLRRMEADIFPFIGAKPVNTLTA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA--VASCNRQH 175 + + V+ G L++A R+ +MRYAVQ GL + NPA ++ A + + + Sbjct: 146 MHFIELVYKVQSRGALDIAKRVLTMCGQVMRYAVQHGLSERNPAADIKPADILKKRKKVN 205 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 + +P+LL KI+ Y G+PLTR A++L L FIR+SEL RW EI F+ + W IP Sbjct: 206 HKRIPESELPDLLQKINQYDGQPLTRLALQLMTLTFIRTSELIGGRWEEISFDNAEWRIP 265 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 PER KMR+ H+VPLS QA+ +L++IK L+F + + K MS Sbjct: 266 PER------------MKMRSQHIVPLSDQAITVLREIKALNSDPVLLFPSERRNGKTMSN 313 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 NT+ AL +GY K + GHGFR +A + L E + +E Q++H R+ V AAY H Sbjct: 314 NTIIYALYRIGY--KGRMTGHGFRGLASTVLHE-KNFDHKWIELQLAHAERDEVSAAYNH 370 Query: 356 KAEHLEERRLMLQWWADFLD 375 A +LE+RR M+QWW ++++ Sbjct: 371 -ALYLEQRRKMMQWWGEYIE 389 >UniRef50_B7MX56 Integrase from prophage n=96 Tax=Gammaproteobacteria RepID=B7MX56_ECO81 Length = 419 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 122/387 (31%), Positives = 199/387 (51%), Gaps = 22/387 (5%) Query: 1 MHLLVHPNGSKYWRLQYRY--EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + LLV P+GSK WR Y + K+ +L+ G +++LADAR RR E R L++ G DP D Sbjct: 37 LFLLVKPSGSKLWRFSYYRPSDKKRILLSFGSLEDVSLADARKRRSEYRTLISAGTDPQD 96 Query: 59 KKKNDKV--EQSKARTFKEVAIEWHGTNKKWS--EDHAHRVLKSLEDNLFAALGERNIAE 114 ++ + + + TF+ VA W+ + + + +SL+ +F +G I Sbjct: 97 HERQKRETEARRQGNTFENVAAAWYQVKISQNLAPNTIKDIWRSLDKYVFPFIGNTPIDT 156 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 L R + + ++ G LE R+ QR +M YA SGLID NPA + A S ++ Sbjct: 157 LTARRFVEVLTPIKERGNLETLKRVLQRVNEVMDYAANSGLIDANPAMNVRKAFPSPVKK 216 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H P + +++PEL+ + TR IE LL R +E RW EI+ +A WTI Sbjct: 217 HMPTIRPEQLPELMQALSVSATERQTRLLIEWQLLTVTRPAEASSTRWDEINLDAKQWTI 276 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P R KMR H++PLS QA+A+L+ +K + +F D +PM+ Sbjct: 277 PAGR------------MKMRRDHVIPLSGQAMAVLEAMKPISHHRNYVFPSLKDPQQPMN 324 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 T N+ALR MG+ + HG R + ++ E G + D +E ++H+ N VR AY Sbjct: 325 SQTANAALRRMGFAGV--LVSHGLRAIFSTAANEEG-FEPDVIEAALAHVDTNEVRRAY- 380 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERF 381 +++ ++E+R ++++WW +F++ Sbjct: 381 NRSNYIEKRIVLMRWWGEFVEAAATGV 407 >UniRef50_C5V4I9 Integrase family protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V4I9_9PROT Length = 410 Score = 365 bits (938), Expect = 1e-99, Method: Composition-based stats. Identities = 142/395 (35%), Positives = 208/395 (52%), Gaps = 18/395 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV NG KYWRL YR+ KQK LALG+YP+I+LADAR RR++ARKLLAN DP K Sbjct: 26 LFLLVQINGGKYWRLAYRFADKQKTLALGIYPDISLADARERREQARKLLANDTDPSAIK 85 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K + + +F +A E H W+E HA + + ++E F +G+R +AE++ Sbjct: 86 KETKRILQTATVNSFSALAKELHKVKAPMWTEGHAKQWMLNMEKYAFPVIGDRPVAEIEP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L+ ++ VE G E RL Q ++ +YA+ G YNPA+ ++ Sbjct: 146 LELVGIMRNVEAQGTFETRDRLLQTISSTFKYAIAIGKAKYNPAEIRLALADRPKVENFA 205 Query: 178 ALELKRIPELLTKIDSY----TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 L IP L D Y + A L LL RSSE+RF++W++ D +A W Sbjct: 206 CLSTDEIPAFLRAFDDYQERGKVSLIAVAAFRLLLLTATRSSEVRFSKWADFDLDAGCWI 265 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP E+ G R H VPLS QA+A+L+ + G + +F + + + Sbjct: 266 IPAEQTGRKGKHGK------RKPHAVPLSDQAIAVLRDLYPVTGHGEHVFPSRNGMGRVI 319 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 SENTVN + MGY K GHGFR++A ++L + G + +E +SH N AAY Sbjct: 320 SENTVNKIIETMGY--KGRQTGHGFRSLARTTLGDMG-HRWEVLEAMLSHALENQTAAAY 376 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERF-ISPFEY 387 + + + EERR ++Q WAD+LD + + P Sbjct: 377 V-RTTYFEERRGIMQKWADYLDAVKSGAQVIPLRA 410 >UniRef50_B8GNQ7 Phage integrase family protein n=6 Tax=Proteobacteria RepID=B8GNQ7_THISH Length = 422 Score = 365 bits (937), Expect = 2e-99, Method: Composition-based stats. Identities = 129/384 (33%), Positives = 206/384 (53%), Gaps = 21/384 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P+GSK WR +YR GK + A+G YP+++L AR RD AR+L+ GV P +K Sbjct: 29 LFLYVTPSGSKLWRYRYRLGGKPAIYAIGKYPQVSLEAARTERDRARELVKKGVHPVVEK 88 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + Q TF+ VA W +N +WSE +A +V ++LE+++F +G+ ++ ++T Sbjct: 89 RVNISTQLEKNENTFEPVARRWMASNVQWSEGYADQVKRTLENDVFPKVGKLPVSSIRTA 148 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 L IK V G VA ++Q + I YA L D +P + +V +H P Sbjct: 149 HLRPVIKDVAERGAPTVAILIRQLCSQIFAYAAGEELCDSDPTALLKRSVKRPRVRHHPP 208 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L + IP+ L+++D G +T A+ L L ++R++ELR A WSE D ++++WT+P R Sbjct: 209 LPWQEIPKFLSRVDDA-GYRVTVIALRLMALTYVRTAELRKAHWSEFDLDSAMWTVPAGR 267 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 KMR H+VPLS QA+ +LK++ G ++F G MS T+ Sbjct: 268 ------------MKMRDPHIVPLSKQAIVLLKELHTLTGGGKVLFPGFRKPGTVMSATTL 315 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM--ARNSVRAAYIHK 356 N L MGY + HGFR+ A + L + + V+ Q++H ++S RA Y H Sbjct: 316 NKVLERMGYGG--QFSSHGFRSTATTLLG-LLSYPENRVDLQLAHSKRKKDSSRAPYDH- 371 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 +++ R++++Q WAD LD Sbjct: 372 TKYIASRKIIMQDWADILDAMARG 395 >UniRef50_A3M8S0 Putative integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M8S0_ACIBT Length = 433 Score = 362 bits (931), Expect = 9e-99, Method: Composition-based stats. Identities = 157/396 (39%), Positives = 232/396 (58%), Gaps = 9/396 (2%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V P G+K W +Y G K++ + LG YP ++LA AR ++ E +++A GVDP + Sbjct: 31 LYLRVRPTGAKSWIFRYTNRGNDKREKITLGPYPALSLAKAREKKHEFLRMIAEGVDPKE 90 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTN---KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + +++ T + V W K SED ++ L+ E++LF ++ I ++ Sbjct: 91 QLSILLAKKNNVNTLENVVRVWLDAYAVRKPLSEDTKNKQLRKFENHLFPKFKDKAIEQI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 RDL + + + A R++ + YAVQ I N A+++ S + H Sbjct: 151 TLRDLKDALNVIYD-HSPDNAQRIRASLIQVYSYAVQHSYIQTNIARDLEDMDLSARKNH 209 Query: 176 RPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 R L IP+L+ +I + +G PLT+ + L L F+RSSE+RFARW+EIDFEA IW I Sbjct: 210 RATFRSLDLIPQLIRRIKADSGNPLTKLCLLLGLHTFLRSSEIRFARWNEIDFEAEIWRI 269 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 PP R I GVKHS RG+KM+ HLVPLS Q++ IL+++ Q+ G D +F ++ +S Sbjct: 270 PPRRRLIEGVKHSDRGAKMKEEHLVPLSKQSIEILEKVYQYSGDCDFVFPSLNNKRIFIS 329 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 ENT N ALR MGY TK E+ HGFR +A S+L E ++SRDA+E+QMSH RN AY Sbjct: 330 ENTPNDALRRMGY-TKEEISFHGFRALARSALGEMSIFSRDALEKQMSHQERNETVGAYT 388 Query: 355 HKAEHLEERRLMLQWWADFLDVNRER-FISPFEYAK 389 H AE+LEER ++Q W+D+L +ISP EY + Sbjct: 389 HIAEYLEEREKIMQIWSDWLSAIENGDYISPHEYGR 424 >UniRef50_A5W5R9 Phage integrase family protein n=2 Tax=Pseudomonas RepID=A5W5R9_PSEP1 Length = 393 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 123/378 (32%), Positives = 196/378 (51%), Gaps = 20/378 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G K W ++ + GKQ ++LG YPEI L +AR RRDEAR+ +A G DP + + Sbjct: 26 LTLYVAETGVKSWHFRFTWLGKQARISLGTYPEIGLKEARARRDEAREDVAQGKDPRESR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + KVE+ +K RTF+ V EW K +E + ++E ++ A G R I +K Sbjct: 86 REKKVERLGAKERTFRRVYEEWLEFRKGGLTESTVKVISNAMELDVLPAFGLRQIDSIKR 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS-CNRQHR 176 D++ I+ +E G + A + +Q + RYAV G+I+ NP EM ++R Sbjct: 146 ADVITLIRRIERRGSITTAVKTRQWIGQVFRYAVAIGMIEINPTAEMHAVTEKMAPHKNR 205 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 P L +P ++ I+ + A +L +L R +E+R A WSEID + + W+IP Sbjct: 206 PFLAFTEMPAIIKAIEESQSGLQLQCATKLLILTACRPAEVRKAEWSEIDLDTATWSIPA 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 + KMR H+VPLS QA+ +L+ + G +F D+ +P+ N Sbjct: 266 SK------------MKMRRDHVVPLSRQAVELLRSMLPISGGLKYVFPNRTDAVRPIGIN 313 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 + L GY HGFR + + + G +++D +ERQ++H +++R Y H Sbjct: 314 YAVNLLDRCGYTG--RQSPHGFRHLFSTEMNSRG-YNKDWIERQLAHADSSAIRDVYNH- 369 Query: 357 AEHLEERRLMLQWWADFL 374 A +LE+RR M+Q WAD + Sbjct: 370 ATYLEQRRDMMQAWADLV 387 >UniRef50_D0KY10 Integrase family protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KY10_HALNC Length = 427 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 139/417 (33%), Positives = 222/417 (53%), Gaps = 41/417 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WRL YR+EGK+K LALG YP++ L ARV RDEAR+L+ANG DP + + Sbjct: 26 LYLFVTPAGGKLWRLDYRFEGKRKTLALGGYPDVNLKQARVYRDEARQLIANGTDPAELR 85 Query: 61 KNDKVEQSKAR---------------------TFKEVAIEWHGTNKK-WSEDHAHRVLKS 98 K +K +++R +F+E+ EW SE + ++V+ Sbjct: 86 KAEKTTITESRREEAEAVKIEAMIQAGEALPGSFEEIGDEWVNMYLADKSEKYRNKVINR 145 Query: 99 LEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID- 157 L+ ++ LG +A++ +L ++ +E G +E A R++Q I+RYA+ +G + Sbjct: 146 LKAEVYPYLGRAPVADVTAPMVLKVLQRIEARGIIESAHRVKQNIGQILRYAIATGRREL 205 Query: 158 YNPAQEMAGAVAS--CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSS 215 ++ + A+A ++ H E K I LL + Y G P+TR A+ + +F+R Sbjct: 206 FDVTMALNKAIAPMPKDKNHAAPTEPKDIAPLLRIMAGYRGSPITRAALTIAPCVFVRIG 265 Query: 216 ELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF 275 ELR +W++IDFE W K H+VPL+ Q +A L +++ Sbjct: 266 ELRHMQWADIDFETFEWRYTAS--------------KTGQEHIVPLARQVVAALIELQPL 311 Query: 276 YGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRD 335 G +F G +PMSENTVN AL+ +G DT+ E+ GHGFR MA + L E + + Sbjct: 312 TGHSRYVFTGARSDTRPMSENTVNGALKRLGIDTQTELTGHGFRAMARTVLEEVHNFRPE 371 Query: 336 AVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE-RFISPFEYAKIN 391 +E Q++H R+ + AY ++ +HLE RR M+Q WAD+LD R+ + + + + Sbjct: 372 VIELQLAHAVRDPLGRAY-NRTKHLETRRKMMQVWADYLDELRDSKNVIQGNFGMVG 427 >UniRef50_A1WW57 Phage integrase family protein n=4 Tax=Proteobacteria RepID=A1WW57_HALHL Length = 412 Score = 361 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 131/386 (33%), Positives = 207/386 (53%), Gaps = 23/386 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYE-GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 + LLV NG K W+ +YR G++ + LGVYP++ L+ AR RRDEAR LLA+G+DP D+ Sbjct: 33 LVLLVKSNGGKQWQFRYRRPSGREATMGLGVYPDVPLSKARERRDEARALLADGIDPIDQ 92 Query: 60 KKNDKVEQSKART--FKEVAIEWHG--TNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 +K + + A T F+ VA EW K HA+R L+ LE F LG R ++ + Sbjct: 93 RKAQRSAAASADTHSFEAVAREWWDAVHRHKVVASHANRNLRRLEQYAFPKLGRRPVSAI 152 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + D+L ++ +E +E A R++ + RYA+ +G +P ++ G + S +H Sbjct: 153 EPPDVLEALRRIEALEHVETAHRVKTLIGQVCRYAIATGRGSRDPTADLRGMLRSPKTRH 212 Query: 176 RPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 PA+ E + LL ID Y G+P TR A++L ++F R ELR A W D + W Sbjct: 213 LPAITEPAELGPLLRAIDGYRGQPTTRAALQLAPIVFCRPGELRAAEWQAFDLSSGTW-- 270 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 ++ SK + PL QA++IL++++ + +F +P+S Sbjct: 271 ------------DYQPSKDGDPLVTPLPRQAISILRELEPISRSSRYLFPSGRTPDRPIS 318 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 +NT+ +AL+ + Y + HGFR A + LVE W + VE Q+ H R++ AY Sbjct: 319 DNTLTAALKRLDYGG--RMVAHGFRAAARTILVERLGWGIEIVEMQLGHRVRDAHGRAY- 375 Query: 355 HKAEHLEERRLMLQWWADFLDVNRER 380 ++ + +E+R +MLQ WAD+LD RE Sbjct: 376 NRTQWIEQRGVMLQQWADYLDELREA 401 >UniRef50_A1TYD6 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TYD6_MARAV Length = 412 Score = 361 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 127/395 (32%), Positives = 210/395 (53%), Gaps = 25/395 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + G +YWRL+YRY GK+K+LALGVYP+++L +AR +RDEA++LLA+ +DP + Sbjct: 33 LYLDIQKAG-RYWRLKYRYGGKEKLLALGVYPDVSLKEARAKRDEAKRLLADNIDPVTHR 91 Query: 61 KNDKVE--QSKARTFKEVAIEWHGT--NKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 + +K E ++ A TFK +A+EW K + + LE + LG R +AE++ Sbjct: 92 QREKAERVEATATTFKGIALEWLEHVHKKNVGATTYPKNKRRLEMYAYPKLGRRPMAEIE 151 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 D+LA ++ +E G ++ A RL+ + RYAV +G + ++ G + + N +H Sbjct: 152 PPDVLAILREIEGKGHVDNAHRLKTLIGQVFRYAVSTGRATRDVTADLRGILPAPNVKHH 211 Query: 177 PA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 A I ++L KID+Y G P A++L+ +F+R LR RW EI Sbjct: 212 AAVTTPDEIADMLKKIDTYWGSPTVCLALKLSPYLFLRPGNLRHMRWEEI---------- 261 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 + +K +VPL+ QA+ +LK++++ G + +F +PMSE Sbjct: 262 ----DWDAATWTTDTTKNGEPLVVPLARQAIDLLKELQELNGNREWVFPSGAGKGRPMSE 317 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 N + AL + + HGFR MA + L E + + +E QM+H R+ AY + Sbjct: 318 NAITGALNRLELQGI--MSAHGFRAMAKTVLTERLGFRTEIIEMQMAHRVRDVHGRAY-N 374 Query: 356 KAEHLEERRLMLQWWADFLDVNRE--RFISPFEYA 388 + L ER+ M+Q WAD+LD ++ ++P A Sbjct: 375 RTTWLPERQAMMQQWADYLDNLKKPGNNVTPIHQA 409 >UniRef50_B9Z434 Integrase family protein n=2 Tax=Neisseriaceae RepID=B9Z434_9NEIS Length = 395 Score = 361 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 136/385 (35%), Positives = 212/385 (55%), Gaps = 20/385 (5%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L + P G+K+WR +Y K + +G YP+++LA+AR R+ R L+ G +P + Sbjct: 26 LYLEIRPTGAKFWRYRYWTSPTKDGIYTIGEYPDVSLAEARAERERVRALVKEGKNPTAE 85 Query: 60 KKNDK--VEQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 KK DK ++ A T VA EW N WSE + +V K L+ +L GE I E+ Sbjct: 86 KKLDKLRSQKETATTLAVVAEEWKVVNWPHWSETYRKQVEKHLQRDLLDEYGELPIREVT 145 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 + LLA I ++ G +A ++Q +I R+A+ + D +P + GA+ +H Sbjct: 146 SAQLLAAISKIDERGAPSIARLVRQWAGSIFRHAIATLRADSDPTYPLRGALRMPPTRHN 205 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 L +P L +D+Y G LTR A+ L +L +R+ ELR A W+E D +A+ W IPP Sbjct: 206 AHLSADELPGFLKALDAYKGFGLTRLAVNLQMLTLVRTQELRLAEWAEFDLDAAEWRIPP 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 E+ KMR H+VPL QA+AI+++++ G +F + M+ Sbjct: 266 EK------------MKMRDPHIVPLPKQAVAIMRELEPLTGRRRWVFPNVRNHDTGMTNT 313 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+ + ++GY + GHGFR A + L E G W+ D +ERQ++H+ RN V+AAY H Sbjct: 314 TILRVIEILGYKGRA--TGHGFRATASTILHEQG-WNTDIIERQLAHLERNKVKAAYNH- 369 Query: 357 AEHLEERRLMLQWWADFLDVNRERF 381 A +L+ERR MLQ WAD+LD+ R++ Sbjct: 370 AGYLKERREMLQAWADYLDLQRDKK 394 >UniRef50_C8KXV2 Prophage CP4-57-like integrase n=1 Tax=Actinobacillus minor 202 RepID=C8KXV2_9PAST Length = 406 Score = 359 bits (923), Expect = 7e-98, Method: Composition-based stats. Identities = 120/389 (30%), Positives = 201/389 (51%), Gaps = 22/389 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L+V P GSK WR Y K+ +ALG+YP ITL+ AR RDE + LLANG+DP + Sbjct: 31 LFLIVSPTGSKSWRFNYYRPISKKRAKIALGMYPAITLSKARALRDEYKHLLANGIDPQE 90 Query: 59 KKKNDKVEQS--KARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K ++++ K T +A +W + E + LE +F LG+ I+E+ Sbjct: 91 HCKQLELQKLQFKQNTLFAIAEKWKQKKETEVKEKTLKPRWRMLEKYIFPELGDLPISEI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV-ASCNRQ 174 L I+ V G + Q IM +AV G+I++N +A + Sbjct: 151 SPLRLSNTIRPVFDRGIANTGLVIIQMVNEIMVFAVNLGIIEFNKCSNVASTFNVKKTTK 210 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H+P + +++PE ++ + + + IE +LL +R +E A+W EI+F+ ++W I Sbjct: 211 HQPTIRPEKLPEFMSALRDSAVDLVVKLLIEFSLLTMVRPNEAANAKWDEINFDDALWHI 270 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P ER KM+ VPLS+QA+ +L ++KQ G IF KPMS Sbjct: 271 PAER------------MKMKKAFTVPLSSQAIKLLNKLKQITGRSRFIFQSPRAPQKPMS 318 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-WSRDAVERQMSHMARNSVRAAY 353 T N+A+R +GY+ K + HG R++A + L E + + + +E +SH +N +R AY Sbjct: 319 SVTANAAIRRIGYNGK--LTSHGLRSIASTYLSEKFIDINVEIIEACLSHQGKNPIRNAY 376 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERFI 382 +++ +LE+R+L++ W F++ + + + Sbjct: 377 -NRSTYLEQRKLLMADWGQFVEESMKSSL 404 >UniRef50_B7N6K6 Prophage CP4-57 integrase n=8 Tax=Enterobacteriaceae RepID=B7N6K6_ECOLU Length = 415 Score = 359 bits (921), Expect = 2e-97, Method: Composition-based stats. Identities = 119/389 (30%), Positives = 199/389 (51%), Gaps = 24/389 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LLV +G K W +Y + K+ +LG YP +TLA AR R + R+LL G+DP Sbjct: 31 LYLLVKTSGRKAWHFEYYHPVTKKRTKTSLGPYPVVTLAMARETRTKYRRLLWQGIDPRQ 90 Query: 59 KKK--NDKVEQSKARTFKEVAIEWHGTNKK---WSEDHAHRVLKSLEDNLFAALGERNIA 113 ++ T ++VA +W K+ SEDHA V +SLE ++F +LG + Sbjct: 91 HLAGIAEEKRLQNECTLEKVAEQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGSTPVT 150 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 E++ + L + +E G LE R+ R I R+A+ LI++NPA + + Sbjct: 151 EIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADNLVARFKKPKK 210 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 Q+ PAL + L+ + + + R TR IE LL ++R E ARW +ID + + W Sbjct: 211 QNMPALPPSELGRLMLALQNASIRKETRCLIEWELLTWVRPGEAVSARWCDIDMKKAEWR 270 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP KM +H VPLS QAL +L+ ++ +F + M Sbjct: 271 IPDT------------FMKMNRSHTVPLSKQALRVLQIMEPVSRHRPWVFPSIRKPLEHM 318 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 + T N+AL MG+ E+ HG R++A + +G + R+ +E ++H + + AAY Sbjct: 319 HQQTANAALIRMGFGG--ELVAHGMRSIART--AGAGHFPREVLESALAHQKEDEIEAAY 374 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERFI 382 +++++LE+RR ++QWW +++D R + + Sbjct: 375 -NRSDYLEQRRPLMQWWGNYVDAARRQAL 402 >UniRef50_Q0BEM8 Phage integrase family protein n=4 Tax=Burkholderia ambifaria RepID=Q0BEM8_BURCM Length = 414 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 133/398 (33%), Positives = 210/398 (52%), Gaps = 20/398 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV P+GSK WR +YR GK+ + A+G YP +L ARV RD+AR+L+ G+ P + Sbjct: 26 LYLLVKPSGSKLWRYKYRIAGKENVFAIGEYPTTSLQAARVARDDARELVKKGLHPSHAR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + + TF+ V+ EW +K W+E H +L+ LE + + +G R + + Sbjct: 86 QEVLSARINEGKATFRAVSDEWLEKKRKTWTERHFGEILRMLEADAYPYIGNRPMRSITA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 D+LA ++ VE G VA +L+Q + + +YAV + D +PA + GAV +H Sbjct: 146 HDVLALMRRVEKRGSPSVAIKLRQYVSNVFQYAVITLRADTDPASVLRGAVLKPPTEHAR 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L + + L ++ Y + T AI L +++F R+ EL ARW EID A+ W +PPE Sbjct: 206 PLSREELKALFRQLPLYKSKRTT-IAIRLLMMLFPRTVELCRARWEEIDLAAAEWRVPPE 264 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI--GDHDSHKPMSE 295 + K R H+VPL TQA+++L+++++ +G I + MS Sbjct: 265 KI------------KSRRLHIVPLPTQAISLLRELQEIHGNRGYILPILHSNRKRPHMSR 312 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T+N AL M + + GH FR A ++L E G W + VE Q+SH ++ R+ Y H Sbjct: 313 ATINRALDSMMPNNPEPITGHDFRATASTNLHEMG-WKDEVVEMQLSHKDKDRTRSTYNH 371 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFISPFEYAKINNP 393 A++L ERR M+Q WAD+L ++ A P Sbjct: 372 -AKYLPERREMMQSWADWLSDVENDALTDASAASTVTP 408 >UniRef50_P76542 Putative prophage CPZ-55 integrase n=6 Tax=Enterobacteriaceae RepID=INTZ_ECOLI Length = 402 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 130/390 (33%), Positives = 214/390 (54%), Gaps = 22/390 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLVHPNGSKYWR +Y ++ + A+GVYP ITL +AR R E+R L+ANG++P ++ Sbjct: 31 LFLLVHPNGSKYWRFRYWLNKREFLQAIGVYPLITLKEARRRATESRSLIANGINPVEQA 90 Query: 61 KNDKVEQSKART--FKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +K + FK+VA +W T WSE +A +V +LE +++ LG+R+I ++ Sbjct: 91 RKEKAIDALNMAAGFKKVAEDWFATRVGGWSESYAKQVRSALEKDVYPVLGKRSIVDITA 150 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 RD+LA ++ + E A +L++R I ++AV + L+ NP ++ A+ + H Sbjct: 151 RDVLALLQK-KERTAPEQARKLRRRIGEIFKFAVITELVTRNPVADLDTALKARRPGHNA 209 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + + IP ++ G + AI L +L +R++ELR RW I+ E + T+P E Sbjct: 210 WIPISEIPAFYKALERA-GSVQIQTAIRLLILTALRTAELRLCRWEWINLEDATITLPAE 268 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 K R H+VPLS QA+ +L+ G +F G KP+S + Sbjct: 269 ------------VMKARRPHVVPLSRQAVELLQDQFTRSGYSAFVFPGRF-MDKPLSASA 315 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + AL +GY + GHG+RT ++L ESG +S D +E Q++H+ + +R Y ++A Sbjct: 316 ILKALERIGYKSIA--TGHGWRTTFSTALNESGRYSPDWIEIQLAHVPKG-IRGVY-NQA 371 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFEY 387 +L++RR M+Q +AD +D +P E Sbjct: 372 AYLKQRRAMMQDYADAIDSILAGNGNPLEP 401 >UniRef50_A5EQ25 P4-like integrase n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EQ25_BRASB Length = 407 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 154/397 (38%), Positives = 228/397 (57%), Gaps = 25/397 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HLL+ P+G+KYWRL YR+ GKQ+ LALGVYP + L +AR RD+A++ +A +DP K Sbjct: 26 LHLLITPDGAKYWRLAYRWHGKQRTLALGVYPAVGLIEARASRDDAKRSIAADIDPSIVK 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K + TF+ VA EWH K S +A ++L+ LE + F A+G R+IA L+ Sbjct: 86 RERKRAAKIATGNTFEAVAREWHENWKDARSPYYAAQILRRLEADAFPAIGRRSIAALEP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC-NRQHR 176 +LL ++ VE G E A RL+Q I R+A+ +G +P+ ++ A+ + Q Sbjct: 146 PELLDMLRKVEKRGVNETARRLKQLVGQIFRFAIVTGRAKRDPSVDLKDALRATGEPQRH 205 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE---IDFEASIWT 233 A+ L +P L K++SY+G T+ A++L L F+R++ELR +W+E +D +++W Sbjct: 206 RAMPLSELPTFLQKLESYSGEQQTKLALKLVTLTFLRTTELRAGKWNELENLDENSALWR 265 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP ER KMR HLVPLS QA+A L++++ G IF M Sbjct: 266 IPAER------------MKMRLEHLVPLSRQAVAALRELRTLSGGSPNIFPSP-GKGDCM 312 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S NT+ AL MGY + HGFR +A + L E+ L++RD +ERQ+SH+ RN VR AY Sbjct: 313 SSNTMLYALYRMGYHGRA--TTHGFRAVASTILNETNLFNRDWIERQLSHVERNEVRRAY 370 Query: 354 IHKAEHLEERRLMLQWWADFLD--VNRERFISPFEYA 388 + AE + +RR M+QWWAD + I P A Sbjct: 371 -NAAEWMPDRRRMMQWWADHITALALEGDKIIPLSRA 406 >UniRef50_B7I6Z3 Site-specific recombinase, phage integrase family n=3 Tax=Moraxellaceae RepID=B7I6Z3_ACIB5 Length = 414 Score = 357 bits (918), Expect = 3e-97, Method: Composition-based stats. Identities = 132/390 (33%), Positives = 212/390 (54%), Gaps = 23/390 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LL+ N +K+WR Y Y K+ + G YPE++LADAR +RDEAR LLA +DP Sbjct: 32 LYLLIDKNQNKFWRFDYSRPYTKKRNTIGFGSYPEVSLADARSKRDEARTLLAQNIDPQV 91 Query: 59 KKKNDKVE--QSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 ++K + E S+ TF VA EW +K+ + R K L + + +G++ I ++ Sbjct: 92 ERKRVEQEHINSEKNTFAAVAAEW--ESKQDFAESTIRGHKRLLQVINSNIGKKPIDKVT 149 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 ++L + E G+LE A +++ + IMRY V +G + + Q++ GA+ + +H Sbjct: 150 PVEVLNICRIYEKQGKLETAKKVKVKCGQIMRYGVATGRCERDVTQDLRGALKTPKVKHL 209 Query: 177 PALELK-RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 AL ELL ID Y G +T+ A+++ +F+R ELR+A+W +ID E +W Sbjct: 210 SALTESNEFAELLYDIDFYEGTFITQMALKIAPYVFVRPGELRYAKWPDIDLEIDLWRYT 269 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY----GAHDLIFIGDHDSHK 291 P + K HLVP+ Q +L +IK+ G + +F K Sbjct: 270 PPKTKN----------KTGVQHLVPIPRQVKVLLLKIKELTYDPDGESEYVFPSMTSKLK 319 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 PMSENT+N ALR +GY + +VCGHGFR A + L E + + +E+Q++H ++ Sbjct: 320 PMSENTINQALRRLGYTS-EQVCGHGFRASARTILEEVLNYPIEIIEQQLAHKVKDMHGR 378 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRERF 381 AY ++ +HLE+RR M+Q WAD+ D + + Sbjct: 379 AY-NRTKHLEKRREMMQSWADYCDQIKADY 407 >UniRef50_B1JDS4 Integrase family protein n=3 Tax=Pseudomonadaceae RepID=B1JDS4_PSEPW Length = 402 Score = 357 bits (916), Expect = 6e-97, Method: Composition-based stats. Identities = 146/391 (37%), Positives = 221/391 (56%), Gaps = 20/391 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G K WRL+YR+EGK KML LG YP +TLA AR RRD ARKLL+ G+DP K Sbjct: 26 LCLEVTTAGGKLWRLRYRFEGKAKMLGLGTYPSVTLAHARERRDAARKLLSQGIDPSAYK 85 Query: 61 KNDKVEQSKAR-TFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + +K T + +A EW+ +W+ A + L+ LE ++F +G+R AE++ Sbjct: 86 QQEKAAAEAQALTLETLAREWYDYNQPRWAPATASKALQYLESDIFPLIGKRPAAEVQRP 145 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA-GAVASCNRQHRP 177 +L+ ++ +E VA +++Q + I R+ + G++ NPA ++ A + +H P Sbjct: 146 ELVDLVRKIEQREAFNVARKVRQWLSQIFRFGLAKGVVAGNPATDLDVVAAHAPRTRHHP 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + +PELL K+++ ++ AI L LL +R ELR A W E D E++ WTIP Sbjct: 206 HVSEAELPELLEKLEAAQCDFTSKIAIRLLLLTAVRPGELRLAPWDEFDLESATWTIPAA 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R H+VPL QA+ +L+ + + G + L F G +D +PMSENT Sbjct: 266 R------------MKARRPHIVPLPRQAVNLLRALHELTGTYPLAFPGRNDRSRPMSENT 313 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 VN AL MGY+ GHGFR + +SL G ++RD +ERQ++H ++S+R Y H Sbjct: 314 VNKALSTMGYEG--RQTGHGFRHLLSTSLNTRG-YNRDWIERQLAHGDQDSIRDTYNHAH 370 Query: 358 EHLEERRLMLQWWADFLDVNRERF-ISPFEY 387 +LE+RR M+Q WAD +D E+ + F+ Sbjct: 371 -YLEQRREMMQTWADHVDALAEQTSVVKFKA 400 >UniRef50_Q4QNN7 Prophage CP4-57-like integrase n=4 Tax=Haemophilus influenzae RepID=Q4QNN7_HAEI8 Length = 403 Score = 356 bits (915), Expect = 6e-97, Method: Composition-based stats. Identities = 113/388 (29%), Positives = 196/388 (50%), Gaps = 21/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L++ P GSK WR Y K+ ++LG+YP ITL+ AR R++ R+LLAN +DP + Sbjct: 31 LFLIISPTGSKSWRFNYYRPITKKRAKISLGLYPAITLSKARELREQYRQLLANKIDPQE 90 Query: 59 KKKNDK--VEQSKARTFKEVAIEWHGTNKKWSED-HAHRVLKSLEDNLFAALGERNIAEL 115 K + Q + TF ++ +W + ++LE F LG+ IAE+ Sbjct: 91 YIKQHELLQLQRQNNTFFAISTQWKQKKVSEIKSVTLKSRWRTLEKYAFPYLGDNPIAEI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + L + + G + IM +AV G+I++N ++ A H Sbjct: 151 TPQQLHDTVIPLFERGVSHTGKLVIALVNEIMNFAVNKGIIEFNKCINVSKAFNVNRTTH 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 P + +++PE ++ + + ++ IE +LL R SE A+W+EIDFE S+W IP Sbjct: 211 HPTIRPEKLPEFMSALRHSHIDLMVKYLIEFSLLTITRPSEAANAQWNEIDFEKSLWNIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 ER KM+ +PLS Q L IL ++K G IF +P+ Sbjct: 271 AER------------MKMKKAFTIPLSLQVLKILNKLKNISGRSRFIFQSQRYPERPLHS 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVES-GLWSRDAVERQMSHMARNSVRAAYI 354 ++ N+A++ +GY K ++ HG R++A + L E+ + + +E +SH ++N VR AY Sbjct: 319 SSANAAIKRVGY--KDQLTSHGLRSIASTYLSETFTEMNLEILEACLSHQSKNQVRNAY- 375 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFI 382 +++ +LE+R+ ++ W DF++ ++ I Sbjct: 376 NRSTYLEQRKPLMNAWGDFVEECMKKSI 403 >UniRef50_A7ZQ61 Phage integrase family protein n=32 Tax=Gammaproteobacteria RepID=A7ZQ61_ECO24 Length = 436 Score = 356 bits (915), Expect = 7e-97, Method: Composition-based stats. Identities = 130/393 (33%), Positives = 207/393 (52%), Gaps = 25/393 (6%) Query: 1 MHLLVHP---NGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVD 55 + L + P G K W +Y K+ ++LG YP +TLA AR RDE LL NG+D Sbjct: 58 LLLRIAPLAKGGKKNWYFRYAVPVTKKRTKVSLGTYPHLTLAKARALRDEYLSLLTNGID 117 Query: 56 PGDK--KKNDKVEQSKARTFKEVAIEWHGTNKKWS---EDHAHRVLKSLEDNLFAALGER 110 P +K + ++ + TF+ VA +W K S +DHA+ + +SLE N+F+ LG+ Sbjct: 118 PQVHNNQKANALKDATEHTFQAVAKKWLDEKVKTSGISQDHANDIWRSLERNIFSTLGDT 177 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 I E++ + L ++ +E G LE R+ R I RYA LI++NPA + + Sbjct: 178 PIKEIRPKMLKQHLEPIEKRGVLETLRRIISRLNEIFRYAATEELIEFNPADNLGQRFSK 237 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 +Q+ PAL +P L +++ + R TR IE LL ++R E RWS+ID E Sbjct: 238 PKKQNMPALPPSELPRFLVALNNASIRLETRLLIEWQLLTWVRPGEAVRTRWSDIDIETG 297 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +W IP E KM+ H VPLS +AL +L +K G + +F Sbjct: 298 MWNIPAE------------FMKMKKPHKVPLSKEALRVLDLMKVISGHREWVFPSIKAPL 345 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 M E T N+A+ MG+ E+ HG R++A ++ ESG + D +E ++H ++ + Sbjct: 346 NHMHEQTANAAIIRMGFGG--ELVAHGMRSIARTAAEESGKFRTDVLEAALAHSKKDEII 403 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDVNRERFIS 383 AAY ++AE+L ER +++QWW+D++ + + I+ Sbjct: 404 AAY-NRAEYLTERVVLMQWWSDYVSSQKCKVIA 435 >UniRef50_D1B120 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B120_SULD5 Length = 419 Score = 356 bits (915), Expect = 7e-97, Method: Composition-based stats. Identities = 126/402 (31%), Positives = 209/402 (51%), Gaps = 35/402 (8%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++LLV PNGSK WRL Y R G + ++LG YP ITL +AR +RDE +K + GVDP + Sbjct: 31 LYLLVEPNGSKGWRLDYTRPNGGRNTISLGTYPTITLCEAREKRDELKKQIKKGVDPSLE 90 Query: 60 KKNDKV------------EQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAA 106 +K K E+ K TF++VA ++ + + + L LE+++F Sbjct: 91 RKGVKELQREEKEADHAEEERKQNTFEKVARDFFESITIELVPKYHSSKLARLENHIFPY 150 Query: 107 LGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG 166 +G I ++ ++ ++ ++ + ++E A R+ + RYAV L +N ++ Sbjct: 151 MGNIPIDQVSRLMIIEHLERLKAANKIETARRILNIIEQVYRYAVTHELAPHNIIADIDK 210 Query: 167 A--VASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWS 223 + +H P + + I +L+ ID Y G T++A++L +L R +RFA W+ Sbjct: 211 RYVIGKKEVRHFPTITDPVEIGKLVRMIDEYPGDISTKYALKLAILTAQRPYNIRFAEWN 270 Query: 224 EIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA-HDLI 282 E D E +W I E+ KM+ H++P+ Q IL++++ F + Sbjct: 271 EFDLERDVWQISAEK------------MKMKRPHIIPIILQIKTILRELEPFTKNRSQYL 318 Query: 283 FIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVES---GLWSRDAVER 339 F + +P+SENT+N ALR +GY TK E+ HGFR M + E + D +ER Sbjct: 319 FPALTSNVRPISENTMNQALRRLGY-TKEEIVSHGFRAMFSTIANEHIPEHGFHSDIIER 377 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 ++H +N + AY ++AE+L ERR +++WWA+FLD R Sbjct: 378 HLAHSEQNKTKGAY-NRAEYLNERRGLIEWWANFLDKVRMNK 418 >UniRef50_A1SRI6 Phage integrase family protein n=2 Tax=Alteromonadales RepID=A1SRI6_PSYIN Length = 416 Score = 356 bits (914), Expect = 9e-97, Method: Composition-based stats. Identities = 115/388 (29%), Positives = 191/388 (49%), Gaps = 21/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L + PNGSK W+L++ E K ++ G YP I+LA+AR R+ A +LLA G++P Sbjct: 30 LQLRIKPNGSKLWQLRFNKPIEKKPALMGFGAYPAISLANARKLREAANELLAQGINPKA 89 Query: 59 KKKNDKVEQSK--ARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++ ++ E+ TF+ V W D + +L +++ +G+ I E+ Sbjct: 90 QRDSEIKEKELILNNTFEMVTAAWIKLKASEVKPDSLKTISTTLTNHILPRIGKCPITEI 149 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + ++ +E G EV AR Q IMRYA G+I NP + G + + Sbjct: 150 TAPMAIEALRPIEAKGNHEVIARACQYLNQIMRYATNLGMIHSNPLTGIKGVFMTKKITN 209 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 P ++ + +P+LL I + + +TR I L R +E A+W+EID+E ++W IP Sbjct: 210 NPHVKPEELPQLLMAIATANIKKITRNLILWQLHTMTRPAETALAQWNEIDYENNLWIIP 269 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 ER K TH +PL+ Q LAIL+ K G D IF D + + ++ Sbjct: 270 GERI------------KTGMTHQIPLTVQTLAILEACKVISGNSDYIFPADRNPNAHANK 317 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 + N A + MGY HG R +A ++L + G+ + E +SH NSV +Y H Sbjct: 318 ASANMAFKRMGYQG--RQTAHGLRGLARTTLSDKGVA-YEPSEACLSHKVGNSVSQSYNH 374 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFIS 383 + +L +R ++ WW+++++ IS Sbjct: 375 -STYLNQRIKIMAWWSNYIEEASYGNIS 401 >UniRef50_A0KW55 Phage integrase family protein n=30 Tax=Gammaproteobacteria RepID=A0KW55_SHESA Length = 411 Score = 356 bits (914), Expect = 9e-97, Method: Composition-based stats. Identities = 120/388 (30%), Positives = 182/388 (46%), Gaps = 22/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V G K W +Y K LG YP+++LA+AR + EARK LA G+DP Sbjct: 31 LYLYVRTAG-KTWEFRYIRPSTSKPTYFGLGSYPDVSLAEARDKALEARKNLAEGIDPQL 89 Query: 59 KKKNDKVEQS--KARTFKEVAIEWHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAEL 115 K +K++ + A+T K +A W + + + LE F LG I+ L Sbjct: 90 LKVENKLKAATENAQTLKHIAQMWMDSKQGSIKPKTIEGNWRKLELYAFPKLGSIAISRL 149 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 +A +K +E G LE R Q IM ++V SG I NP + +H Sbjct: 150 TAPIAIAALKPLEQKGHLETVKRTAQLLNEIMNFSVNSGYIHANPLSGIREVFRKSKVEH 209 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 AL+ + ELL I + TR IE L R +E ARW EIDF+A +WTIP Sbjct: 210 LKALKPAELAELLQTIANANLLLTTRCLIEWQLHTMTRPNEAAGARWEEIDFDAKLWTIP 269 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R KM H++PL+ L IL+ +K +F D K Sbjct: 270 ESR------------MKMNREHIIPLTEHTLTILETVKPISEQSQFVFPSSKDPQKHTDP 317 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T+N AL MG + GHG R++A ++L E G + D +E ++H+ +N +R+AY + Sbjct: 318 ETINKALGRMGLKGRT--TGHGLRSLASTTLNEQG-FDGDVIEAALAHVDKNQIRSAY-N 373 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFIS 383 + +LE R +++WW++ + +S Sbjct: 374 RTTYLERRTKLMEWWSNHIATAAVGSLS 401 >UniRef50_Q0I4F8 Integrase n=1 Tax=Haemophilus somnus 129PT RepID=Q0I4F8_HAES1 Length = 413 Score = 355 bits (912), Expect = 1e-96, Method: Composition-based stats. Identities = 123/380 (32%), Positives = 199/380 (52%), Gaps = 19/380 (5%) Query: 1 MHLLVHPNGSKYWRLQYR-YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++LLV NGSK WR Y K+K+++LG YPE +L DAR +RDE R LLA ++P D Sbjct: 31 LYLLVKSNGSKLWRFNYYDLLKKRKLISLGSYPETSLLDARTKRDEYRALLAKDIEPQDY 90 Query: 60 --KKNDKVEQSKARTFKEVAIEWHGTNKKWSE-DHAHRVLKSLEDNLFAALGERNIAELK 116 K+ ++ ++ T VA +W E D + LE +LF LG I+++ Sbjct: 91 IFKQKEQAIFNQCNTLIGVAKDWREMKSSKVEADTMKDQWRLLELHLFPHLGNMPISDIT 150 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 ++ + + E+ ++ + IMR+AV +GLI +NP + S QHR Sbjct: 151 APFTRMKLQKLADDKKFEMLKKVIRGLNEIMRFAVNAGLIQFNPTANLQELFPSGEVQHR 210 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 P++ ++P+ L ++ + TR +E LL +R SE W EIDFE W IP Sbjct: 211 PSIHPDKLPKFLESVNKANIQLQTRCLLEWQLLTMVRPSEAAGTMWREIDFENKTWLIPK 270 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +R + +HLVPLS QA+ IL ++ G D +F + D MS Sbjct: 271 DRMKGK-----------KRSHLVPLSQQAINILNIMRPITGNCDFVFPKNGDLTTNMSSE 319 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+N ALR MGY +C HGFR++A ++L E+ ++ + +E +SH+ + VR AY + Sbjct: 320 TINKALRKMGYQGI--LCAHGFRSIASTALNEN-EFNVEIIEALLSHVKGDKVRTAY-DR 375 Query: 357 AEHLEERRLMLQWWADFLDV 376 + + +++R ++WW +F++ Sbjct: 376 STYEKQKRQYIEWWGNFVEK 395 >UniRef50_B7I7W7 Integrase n=4 Tax=Pseudomonadales RepID=B7I7W7_ACIB5 Length = 427 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 121/394 (30%), Positives = 201/394 (51%), Gaps = 23/394 (5%) Query: 1 MHLLVHPNGSKYWRLQYRY-EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++ V P+G K W +Y+ +GK L +G YPE++ A AR + E K ++ G +P Sbjct: 52 LYFRVKPDGKKAWLFRYKKADGKWSWLGIGTYPELSGAGARKKAREIIKDISQGDNPIIT 111 Query: 60 KKNDKVEQSKAR--TFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 K+ K ++ + TF+ +A EW T W +D R +LE ++FA G+R +K Sbjct: 112 KQERKRQELEQNNATFEVLAREWLDTKANTWVKDTMTRNKGALEKHIFAIFGKRLYTSIK 171 Query: 117 TRDLLAPIKAVEM-SGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + + +K ++ G E R++ I +A +G IDYNP + + + +Q+ Sbjct: 172 PIEWMNHLKGIQQHQGIYEQVNRVRAMCRDIYDFAKVTGRIDYNPLEGLQKFLQQGVKQN 231 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 + + +P LL I+SY R ++L ++F R +ELR A+W E D IW IP Sbjct: 232 MSHVSEQELPALLRAINSYPTMD-VRMGLQLLAMLFCRPTELREAKWQEFDLNQGIWNIP 290 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 ER K R H+VPL QA+ IL ++K + + +F D KP S+ Sbjct: 291 AER------------MKKRREHVVPLPRQAITILNELKTYETNSEYLFPSRSDKSKPKSD 338 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 ALR MGY+ HGFR +A + L G + +E ++H+ ++ V Y + Sbjct: 339 TVFIMALRRMGYEG--RQTPHGFRHIASTLLNNRG-FDERHIEAALAHV-KDGVAGVY-N 393 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFISPFEYAK 389 KA++L++R++MLQW+A+ L+ ++ I F+ AK Sbjct: 394 KAQYLDDRKIMLQWYANHLEEIADQRIIQFKKAK 427 >UniRef50_C1TL52 Integrase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL52_9BACT Length = 378 Score = 354 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 129/381 (33%), Positives = 207/381 (54%), Gaps = 32/381 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + P G K W+++++ +G++ LG YP+I+L +AR++RDE R L N Sbjct: 26 LWLEITPAGKKTWKVRFKAQGREIKHTLGRYPDISLKEARLKRDEIRLELVN-------- 77 Query: 61 KNDKVEQSKARTFKEVAIEWHGTN--KKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + TFK +A EW + HA + L+ + LG++ A++ Sbjct: 78 ----HKSVPEGTFKALAEEWFERQVVPVRTHGHARTIRSRLDRLILPYLGDKPPADIDAP 133 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 +LLA ++ +E G +E A R+ Q ++RY + +G ++ ++ GA+ +H P Sbjct: 134 ELLAILRRIEDQGHVETAHRVSQIVGQVLRYGIATGQARHDITADLKGALIPRKPEHFPT 193 Query: 179 L-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L + K+I L+ I +++G + R A+ + +R E+R A W EID + +W IP E Sbjct: 194 LTDPKKIGGLMRAIQAFSGSVVVRCAMLFQIYTAVRPGEMRKAEWKEIDGD--LWKIPAE 251 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R HLVPLS+QA+ +L++I+ G +LIF +P+S+ T Sbjct: 252 R------------MKKRRPHLVPLSSQAIGVLEEIRPLTGGGELIFPSVRSKTRPISDMT 299 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 VN+ALR MGY + E+ GHGFR M + E W + +E Q++H+ +NSVRAAY H A Sbjct: 300 VNAALRRMGY-AQNELTGHGFRAMFSTIANEC-QWPSNVIELQLAHVDKNSVRAAYNH-A 356 Query: 358 EHLEERRLMLQWWADFLDVNR 378 E L++RR +LQWW D+LD R Sbjct: 357 ELLDKRRELLQWWGDWLDGVR 377 >UniRef50_Q167M4 CP4-like integrase, putative n=40 Tax=Alphaproteobacteria RepID=Q167M4_ROSDO Length = 409 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 140/384 (36%), Positives = 211/384 (54%), Gaps = 18/384 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++LV PNGSK W+++YR +G++K L++G YP ++L AR RD AR ++ANG DP ++K Sbjct: 40 LYVLVKPNGSKLWQMKYRLDGREKTLSIGAYPAVSLQQARKSRDAARSMIANGEDPSEEK 99 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAA-LGERNIAELKT 117 + K + +A +TF+++ + +K + A + L G++ I + Sbjct: 100 QEQKRLKREASGQTFEKIGGMFLDKQRKEGKSKATLDKTAYHLKLANHDFGKKPITAITA 159 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L ++ VE G E A RL+ R ++ RYAV SGL + +P + A+ RQHR Sbjct: 160 PMILRTLRKVEAKGNYETAHRLRARIGSVFRYAVASGLAETDPTYALRDALIRPTRQHRA 219 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ + LL +ID + G+ TR A++L L+ R ELR A+WSE D +W IP Sbjct: 220 AITDPTAFGALLREIDVFDGQVTTRIALQLLALLAQRPGELRHAKWSEFDEADKVWAIPA 279 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 + KMR H VPL+ QA+ +L +++ G + +F H+PMSEN Sbjct: 280 GK------------MKMRRDHFVPLADQAITLLNELRPLTGESEYLFPSLRSWHRPMSEN 327 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+N+ALR MGY E+ HGFR + ESGLW+ DA+ER ++H RN VR AY + Sbjct: 328 TMNAALRRMGYSGD-EMTAHGFRATFSTLANESGLWNPDAIERALAHEERNEVRRAYA-R 385 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 H EER + WWA LD R Sbjct: 386 GAHWEERVKLSDWWAGRLDDFRSS 409 >UniRef50_Q3SHC8 Probable cp4-like integrase protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SHC8_THIDA Length = 425 Score = 354 bits (908), Expect = 4e-96, Method: Composition-based stats. Identities = 154/388 (39%), Positives = 215/388 (55%), Gaps = 22/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV+ G KYWR+ YR+ GK+K LALGVY +++LA AR +RD+AR +LA+G DPG+++ Sbjct: 42 LYLLVNQAG-KYWRMDYRFLGKRKTLALGVYSDVSLARARQKRDDARAMLADGTDPGEQR 100 Query: 61 KNDKVE--QSKARTFKEVAIEWHGTN--KKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 K K ++A +F+ VA EWH +KW++ A + + LE +F +G IA +K Sbjct: 101 KETKRANQAAQANSFEAVAREWHAMKLKRKWTQSTADKTMAQLEAYVFPEMGHLPIASVK 160 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 LLA ++ VE G A RL++ I RY V +G + NPA + GA+ HR Sbjct: 161 ASQLLAMLRKVENRGIAYTAVRLREVCGQIFRYGVATGRAEDNPAAHLLGALHKPEVNHR 220 Query: 177 PALELKR-IPELLTKIDSYTGR-PLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 PA+ +R L + TG +TR A LL F+R+ E R+A+W EID++A W + Sbjct: 221 PAITDRRGFGAFLRDLREATGYDAVTRHAAYFALLTFVRAQEFRYAKWEEIDWQAKEWKV 280 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH--DSHKP 292 P +R K H VPLS QALA+L ++K G +F + Sbjct: 281 PAKRMKTG---------KALPAHTVPLSQQALALLTELKNLTGHSPYLFPKVKGYGDAEV 331 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 +SENTV L MGY C HGFR A S L E G WSR+A+ERQ+ H +S AA Sbjct: 332 ISENTVGKMLNKMGYQG--RQCVHGFRASARSILSEQG-WSREAMERQLDHKETDSTVAA 388 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRER 380 Y ++EHL ERR M+Q WAD D Sbjct: 389 YA-RSEHLPERRNMMQAWADTCDALETG 415 >UniRef50_B8F555 CP4-57 prophage, integrase n=1 Tax=Haemophilus parasuis SH0165 RepID=B8F555_HAEPS Length = 405 Score = 353 bits (907), Expect = 5e-96, Method: Composition-based stats. Identities = 116/388 (29%), Positives = 190/388 (48%), Gaps = 21/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + LLV GSK WR Y K+ +ALG+YP + L+ AR RDE +KLLA+ +DP Sbjct: 31 LFLLVSITGSKSWRFNYYQPITKKRTKMALGMYPTVNLSKARALRDEYKKLLADDIDPQQ 90 Query: 59 KKKNDKVE--QSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 KN + E Q TF +A +W + + LE F LG +I + Sbjct: 91 YIKNKQQEKLQETQNTFLAIAEQWKQKKSAEIKPATLKNHWRRLELYAFPTLGNISITMI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 K + + + + G L Q IMR+AV G+I++N ++A +H Sbjct: 151 KPLQVTELVTPLFLRGVNSTGVLLLQTINEIMRFAVNRGIIEFNKCADIADTFVKSKSEH 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 P + + +PE + + + + IE +LL R SE A+W+EIDFE S+W IP Sbjct: 211 HPTIRPEHLPEFFAALRNSHADLIIKSLIEFSLLTIARPSEAANAKWAEIDFEQSLWNIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 ER KM+ +PLS QA+ ILK+++ G IF +P+ + Sbjct: 271 AER------------MKMKQPFTIPLSIQAVKILKKLQVITGRSLYIFQSIKKPSQPIGK 318 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGL-WSRDAVERQMSHMARNSVRAAYI 354 N+ ++ MGY K + HG R++A + L E + + + +E +SH ++N VR AY Sbjct: 319 QIANNTIKQMGYKGK--LTSHGLRSIANTYLSEKFIDLNVEIIEACLSHKSQNQVRNAY- 375 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFI 382 +++ +LE+R+ ++ W F++ + + + Sbjct: 376 NRSTYLEQRKPLMNDWGQFVEESMKSSL 403 >UniRef50_B0RRY6 Complete genome, strain B100 n=3 Tax=Proteobacteria RepID=B0RRY6_XANCB Length = 409 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 139/396 (35%), Positives = 214/396 (54%), Gaps = 26/396 (6%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LL+ P+G+++WR YR GK+ L+ G YPE++LADAR R EAR+L+A +DPG+ Sbjct: 26 LYLLLRPDGARWWRYDYRRPVTGKRNTLSFGTYPEVSLADARERLAEARRLVAAKIDPGE 85 Query: 59 KKKNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++K K A +F+ VA EW K+WS +A ++++ L+ ++F +G IA + Sbjct: 86 QRKAVKAAGEAAAANSFEVVAREWFAKQQKEWSPQYAEKIIRRLQSDIFPWIGSSPIAAI 145 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-Q 174 +LL ++ +E G +E A R Q A+ RYAV++G + +P + GA+ Sbjct: 146 TAPELLKHLERIEQRGAIETAHRALQTCGAVFRYAVRTGRAEADPTGALKGALTPWRSMP 205 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 A + +L KID T RP+ R A+ L L+F R EL RW+E+D +A W Sbjct: 206 FAAATTSEEATTVLRKIDISTSRPVVRSALRLAPLLFARPGELVRMRWTELDLDAGQWRY 265 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 +K + TH+ LSTQA+ IL+ + G + +F G D K MS Sbjct: 266 --------------FVTKTKRTHIAALSTQAIEILRDLHPLTGRGEFVFPGGRDPRKHMS 311 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 N + A R G + K E HGFR MA + L E G W+ DA+E ++H VR Y Sbjct: 312 GNAILVAARRCGIE-KDESTIHGFRHMASTLLNEMGHWNPDAIESALTHKMPG-VRGIY- 368 Query: 355 HKAEHLEERRLMLQWWADFLDVNR---ERFISPFEY 387 ++A++L+ERR M+Q WAD LD + + PF++ Sbjct: 369 NQAQYLDERRKMMQSWADNLDTLKADAANKVVPFKH 404 >UniRef50_P37317 Integrase n=42 Tax=root RepID=VINT_BPSFV Length = 385 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 120/378 (31%), Positives = 200/378 (52%), Gaps = 22/378 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V +G K W+L+Y+ +GK+K+L +G YP +TL +AR + ARK ++ G+DP K Sbjct: 25 LYLYVPVSGKKVWQLRYKIDGKEKILTVGKYPLMTLQEARDKAWTARKDISVGIDPVKAK 84 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K S +F + EW+ K+ WS +A + K +D++ +G I +++ Sbjct: 85 KA----SSNNNSFSAIYKEWYDHKKQVWSVGYATELAKMFDDDILPIIGGLEIQDIEPMQ 140 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 LL I+ E G +E A + ++R + RYA+ +G YNPA ++A A+ +++ P L Sbjct: 141 LLEVIRRFEDRGAMERANKARRRCGEVFRYAIVTGRAKYNPAPDLADAMKGYRKKNFPFL 200 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 +IP + +++G ++ A ++ +R+ ELR +W +DFE I TI Sbjct: 201 PADQIPAFNKALATFSGSIVSLIATKVLRYTALRTKELRSMQWKNVDFENRIITIDAS-- 258 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA-HDLIFIGDHDSHKPMSENTV 298 K R H+VP+S Q + +L + + +F G +D KP+ EN V Sbjct: 259 ----------VMKGRKIHVVPMSDQVIELLTTLSSITKPVSEFVFAGRNDKKKPICENAV 308 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 ++ +GY+ GHGFR + + E W DA+E Q++H SVR Y H A+ Sbjct: 309 LLVIKQIGYEGLE--SGHGFRHEFSTIMNEH-EWPADAIEVQLAHANGGSVRGIYNH-AQ 364 Query: 359 HLEERRLMLQWWADFLDV 376 +L++RR M+QWWAD+LD Sbjct: 365 YLDKRREMMQWWADWLDE 382 >UniRef50_Q4K6S7 Site-specific recombinase, phage integrase family n=4 Tax=Proteobacteria RepID=Q4K6S7_PSEF5 Length = 413 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 114/395 (28%), Positives = 187/395 (47%), Gaps = 23/395 (5%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++ V P+G K W+L+Y R G + LG YPE++ A AR + E RK +++G+DP ++ Sbjct: 34 LYFRVKPDGGKSWQLRYKRPAGNWAWMGLGGYPEVSGALAREKAAELRKTISSGIDPLEQ 93 Query: 60 KKNDKVE--QSKARTFKEVAIEWHGTN--KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K++ K +K RTF+ A W K + +++ L+ ++ ALG++ + E+ Sbjct: 94 KRSAKAAIDAAKTRTFRAAADAWLKAKEEKGLAPSTLNKIRTYLDKDILPALGDKPLDEI 153 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG-AVASCNRQ 174 D ++E VA + + I A+ GL + +P + A + Q Sbjct: 154 TRTDCAELQASIEARDAHNVAEKCRTWINQIFGRAIGLGLTENDPGSRLRDIAAQAPKTQ 213 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 P L + E LT + + R R A L + R +R A W E D + + WT Sbjct: 214 QHPHLLEPELGEFLTALKNTPSRLTARTAAWLCIWTASRPGMVRLAEWKEFDLDKATWTT 273 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P + KMR + PL QA+A LK++ G +F G + +S Sbjct: 274 PAAK------------MKMRRDFVCPLPHQAIAALKELHCLTGRSRWLFPGVGAKNPTIS 321 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 ENT+N +GY K + GHG R A + L E G W ++ VE Q++H + Y Sbjct: 322 ENTINKVFATIGY--KGRLVGHGTRHTASTLLREHG-WPKEHVEAQLAHKEEG-ISGVY- 376 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFISPFEYAK 389 +KA++LE+R M+QW+AD LD + + ++ K Sbjct: 377 NKAQYLEQRITMMQWYADHLDALEQGKVIQGQFGK 411 >UniRef50_A6QCY9 Site-specific recombinase, phage integrase family n=2 Tax=Proteobacteria RepID=A6QCY9_SULNB Length = 409 Score = 351 bits (902), Expect = 2e-95, Method: Composition-based stats. Identities = 119/393 (30%), Positives = 209/393 (53%), Gaps = 24/393 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + P G K+WRL+YR++GK+K ++LGVYP +L DAR +R++ + +A G+DP ++ Sbjct: 31 LYLSITPKGQKWWRLKYRFDGKEKRISLGVYPNTSLQDARQQREDFKTQIAKGIDPSRER 90 Query: 61 KNDKVEQSKA-----RTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAE 114 K K TFK + +EW + + +E + ++LE + +A LG++++ + Sbjct: 91 KEKKEAVKAEVFKSRNTFKSICLEWIELQRPQMAEATLSKYERTLEKDFYAPLGDKSMND 150 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA---VASC 171 + DL+ + ++ G +E A R I RYA+Q + +N +++ + Sbjct: 151 ITRHDLITIAQVIQDRGAVETAHRSLGLCNRIWRYALQFDKVGHNIVSDISKKDVLRSYK 210 Query: 172 NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 N+ + + RI EL+ ID+YTG T+ A+ L L F+R +R+A WSE D E I Sbjct: 211 NKSFKTITDEVRIGELMNAIDNYTGEFTTKSALRLLPLTFVRPHNIRYAEWSEFDLENGI 270 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 WTIP E+ + +PL+ QA+ ILK+I + +F K Sbjct: 271 WTIPAEKMKMKKEHK------------LPLAPQAVKILKEIYPYTNDAKYVFHSPISRLK 318 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 +SENT+N AL+ + + E+ HGFR M + ESG + + +E ++H N V+ Sbjct: 319 AISENTLNMALKRLDFGG--EIVSHGFRAMFSTLAYESGKFRSEVIEDLLAHQEANQVKK 376 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRERFISP 384 AY ++A + E+R +++W+AD+L+ + + Sbjct: 377 AY-NRAAYDAEKREIVEWYADYLENVKIKERIN 408 >UniRef50_Q0I4P6 Integrase n=14 Tax=Pasteurellaceae RepID=Q0I4P6_HAES1 Length = 418 Score = 351 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 115/397 (28%), Positives = 197/397 (49%), Gaps = 23/397 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LLV GSK WR Y K+ ++LG YP+++LA AR R++ R LLA +DP + Sbjct: 37 LYLLVKATGSKLWRFNYYKPLTKKRTEMSLGAYPDVSLAQARELRNQYRSLLAQDIDPNE 96 Query: 59 KKKNDKVEQSKA--RTFKEVAIEWHG---TNKKWSEDHAHRVLKSLEDNLFAALGERNIA 113 ++N K + T++ VA W T K +SE + V ++ L G I+ Sbjct: 97 HRQNVKQAKLDEINNTYEAVAWAWFEYRQTKKNFSEGYKKDVASLIKRCLLPHFGSLPIS 156 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 ++ L K + G LE R Q+ IM +A+ LI +NP ++ S Sbjct: 157 QITAPMALKAFKQYQDEGTLEKLKRTIQKHNEIMNFALHRDLISFNPTANISKEFDSPTV 216 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 +H ++ + +PE + +++ TR+ I LL R +E AR+ +ID ++ +WT Sbjct: 217 EHFKTIQPEDLPEFMYTLNNAQINLRTRYLILWQLLTMTRPNEAAKARYEDIDEKSRLWT 276 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP E K H + LS QA+A+L++IK+ G +F + Sbjct: 277 IPAE------------NMKRGIAHKITLSRQAMALLREIKKLSGGKTYLFPNVKYPQTHV 324 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 + T N+A++ MGY K + HG R++A + L E G ++ + +E +SH+ + ++AAY Sbjct: 325 NTQTANAAIKRMGYQGK--LVAHGLRSIASTYLNEKG-YNSELIEVALSHINSDRIKAAY 381 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERFISPFEYAKI 390 + E LE+R +LQ WADF++ + + + ++ Sbjct: 382 -DRGERLEQRFKLLQVWADFVEECSQGALPQYHLKRV 417 >UniRef50_D2MI75 Phage integrase family protein n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=D2MI75_9BACT Length = 398 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 98/391 (25%), Positives = 183/391 (46%), Gaps = 22/391 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P GSK W ++ +GK+ + LG +P ++L +AR R + R+ +A+G DP +K Sbjct: 24 LFLKVSPGGSKSWVQRFTIKGKRHDVGLGGWPVVSLQEARERAFDNRRAVAHGRDPLAEK 83 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSE--DHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + + TF+ VA +++ N + H R L+ +E F G+ + + Sbjct: 84 QKA-SKAAAVPTFRAVARKYYEENLPRWKAGRHTDRWLQVVEKYAFPVFGDVPVDRVGRE 142 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPA-QEMAGAVASCN--RQH 175 D+L + + + + E A +L+ R I+ + G + N A +++ GA+ S ++H Sbjct: 143 DVLRMLTPIW-TAKPEYARKLRHRVRLILDWCQAHGYVHTNIAGEQIGGALPSMPSVKEH 201 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 +L + + L I++ + + +L +R E R A W EI++E WTIP Sbjct: 202 HRSLPYAEVSQALDLIEASGASLSAKLCLRFLILTAVRPGEARNATWEEINWETKTWTIP 261 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 + K + H VPLS +A+ +L++ + G LIF KP+S+ Sbjct: 262 AGK------------MKAKAEHRVPLSREAMQVLERASRVRGESPLIFPSSLKRAKPLSD 309 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T+ LR +G K HGFR+ + E +E ++H N++ AY Sbjct: 310 MTLTKLLRDVGLREKT--VPHGFRSSFRTWAGEQTNSPTPVIELCLAHSVGNAIEKAYT- 366 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFISPFE 386 +++ L++R+ ++Q W ++ + P Sbjct: 367 RSDLLQKRQRLMQEWGRYVTGEGRANVVPLH 397 >UniRef50_Q1QA94 Phage integrase n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QA94_PSYCK Length = 413 Score = 350 bits (898), Expect = 7e-95, Method: Composition-based stats. Identities = 126/391 (32%), Positives = 211/391 (53%), Gaps = 18/391 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G K W YR++GKQ+ L +G YP ++L +AR R E ++L+A+GV+P D K Sbjct: 32 LQLWVRYTGVKSWISAYRWQGKQQTLTIGTYPVMSLQNARQRNIEIKRLIADGVNPKDHK 91 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K + Q F +A W+ K +E R + ++ ++G++NI ++ D Sbjct: 92 KEQQASQDGLNIFDNIAQSWYAERKTYLAESTFTRNYSAYMRDVKPSIGQKNINDITAPD 151 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +LA KAVE G E+A R + I ++A+++GL +NPA ++A A+ + + Sbjct: 152 ILAIGKAVESRGANEMARRTIREVGQIFKHAIRNGLATHNPATDLAEAIKPHKTTNHHRI 211 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 +++P+LLT I++Y G L + + F+R++E+RF WSEID++ +W IP ++ Sbjct: 212 TSQQLPKLLTDINAYQGDVLVKLGLWFLCYTFVRTNEIRFMEWSEIDYKHGLWRIPADK- 270 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 K + H+VPL+ QA+AIL+QIK+ + +F KP S++ Sbjct: 271 -----------MKAKRLHIVPLAPQAMAILEQIKELGFSDQYVFFNTSTR-KPYSQSAFI 318 Query: 300 SALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 +AL MGY K + GHGFR +A ++L E + +A+E Q++H N + AAY + A+H Sbjct: 319 NALWNMGYKGK--MTGHGFRGLASTTLHE-KEFMHEAIELQLAHDRENKISAAY-NGAQH 374 Query: 360 LEERRLMLQWWADFLDVNRERFISPFEYAKI 390 L R M+ WA+F+D + + Sbjct: 375 LPYRIDMMHQWANFIDDAYAGKLDNVIHTNF 405 >UniRef50_B3GXJ8 Prophage CP4-57 integrase n=4 Tax=Pasteurellaceae RepID=B3GXJ8_ACTP7 Length = 406 Score = 349 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 109/382 (28%), Positives = 188/382 (49%), Gaps = 17/382 (4%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L V P+ K W Y+ ++ L +G YP I++A+AR R+E R LLA G+DP Sbjct: 31 LYLRVKPSKVKTWIFNYQEPITKRRTNLTIGDYPAISIAEARTIREEYRALLAKGIDPKT 90 Query: 59 KKKNDKVEQS--KARTFKEVAIEWHGTNKKWSED-HAHRVLKSLEDNLFAALGERNIAEL 115 K+ + +Q+ TF ++A W K E + LE++LF LG I ++ Sbjct: 91 NKEEQERQQAEQNDNTFLKLAQLWKEKRSKEVEPLTMAKNWARLENHLFPVLGHYAIDKI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 L+ +K + G + R+ I+ Y V G++ +N Q ++ A + H Sbjct: 151 TPPILIKAVKPLNDKGINDTLHRILNLANQILNYGVTVGVLPFNACQNVSDAYHKETQTH 210 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 PA++ +P+L+ + LT+ + LL +R +E W+EIDF+ ++W IP Sbjct: 211 HPAIKPSELPKLIADFQNSNRDFLTKVLFKWQLLSMVRPAEAVSIEWAEIDFDKNLWFIP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 E+ + K + H VPLS+Q L IL+ ++ G + +F +K MS+ Sbjct: 271 AEKMK--------KTRKGQFPHTVPLSSQMLKILESLRPITGVNKFVFPHYSQPNKSMSK 322 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 T+ +ALR +GY + HG R++A + L + + A E ++H N AY + Sbjct: 323 ETITNALRKIGYRGIQD--SHGLRSIARTYLEDQAV-DFRAAESCLAHRIGNETSQAY-N 378 Query: 356 KAEHLEERRLMLQWWADFLDVN 377 +AE++E RR ++Q W D+ + Sbjct: 379 RAEYIELRRPLMQLWGDYCESC 400 >UniRef50_A5EXV7 Integrase A2 n=6 Tax=Cardiobacteriaceae RepID=A5EXV7_DICNV Length = 401 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 125/382 (32%), Positives = 210/382 (54%), Gaps = 31/382 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + GS +W +Y G+++ ++LG YP +++ AR E R L G+DP ++ Sbjct: 36 LSLKITDRGSYFWNFRYYINGRERNMSLGRYPAMSIEAARGEALELRYHLRQGLDPLAER 95 Query: 61 KNDKV-----EQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIA 113 K + E+++ TF+ VA EW+ + +E HA +V+ +LE +F +G++ I+ Sbjct: 96 KKKQAAYLAEEKTQKETFEFVAREWYQLKRPEWKNEKHAQQVITTLEQFVFPFIGKKPIS 155 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 + +LL ++ + E A+R++QR A+ YA+Q+ + NPA + S Sbjct: 156 RISPPELLKVMEKLYDR--PETASRVKQRIRAVFDYAIQTDRLSRNPAIALPKIFRSTIA 213 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 + +P+L + + ++D+Y G P T A+ L +L RS ELRF +W E + + W Sbjct: 214 K-QPSLPARELGIFFKQLDTY-GNPKTALALRLLILTMTRSGELRFGQWQE--LQGNEWH 269 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF-YGAHDLIFIGDHDSHKP 292 IP ER KM H+VPLS AL IL +++ G+ + P Sbjct: 270 IPAER------------MKMNRPHIVPLSDWALEILDELRSLRRNNSPYFVTGNRN--TP 315 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 +S+ T++ A++ +GY + HGFR A +++ ESGLW+ DA+ERQ++H N+VRAA Sbjct: 316 LSDTTLSLAMKRLGYAGRA--VPHGFRATASTAMNESGLWNPDAIERQLAHTDENAVRAA 373 Query: 353 YIHKAEHLEERRLMLQWWADFL 374 Y ++AE+LEER M+QWWAD++ Sbjct: 374 Y-NRAEYLEERHRMMQWWADYI 394 >UniRef50_A1W8P6 Phage integrase family protein n=4 Tax=Comamonadaceae RepID=A1W8P6_ACISJ Length = 413 Score = 347 bits (890), Expect = 5e-94, Method: Composition-based stats. Identities = 128/391 (32%), Positives = 210/391 (53%), Gaps = 14/391 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+GSK W + ++GK+ +ALG YP +LADAR RD A+ A+GVDP ++ Sbjct: 27 LYLEVSPSGSKRWFWKTYFDGKEGRMALGSYPTQSLADARKARDIAKLKKADGVDPVQER 86 Query: 61 KNDKVE--QSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K++ +S TF+ +A+EWHG +WS+ HA R + LE +LF +G+R + ++ Sbjct: 87 KLEKLKGSRSGGDTFQAIALEWHGRQVDQWSDTHAGRTKRQLERDLFPWIGDRQMTSIEP 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQS-GLIDYNPAQEMAGAVASCNRQHR 176 +LLA ++ +E G +E A R I RY + + G + + + + Sbjct: 147 MELLATLQKIEERGAMETADRALMLCRQIWRYWLPTAGNTQRDITVGLKNRLTPYRGTNF 206 Query: 177 PAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 PA+ E KR ELL + Y G R A+ L L++ R LR W+E+D +A++WTIP Sbjct: 207 PAIVEPKRFGELLRAMHVYKGSHTVRTALLLAPLLYQRPGNLRAMEWAEVDLDAALWTIP 266 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 + + H VPL TQA+ +L+ ++ G +F G D +PMS+ Sbjct: 267 SMKMKRTKTEKEQ-----GEPHAVPLPTQAVELLRNLQALTGRGTYVFPGQRDHERPMSD 321 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 N+V SAL +G+ T+ HGFR A + LV+ A+E ++H ++S +Y + Sbjct: 322 NSVRSALYSLGFGTEQSW--HGFRASARTMLVDQLDLDPLAIEANLAHAVKDSNGRSY-N 378 Query: 356 KAEHLEERRLMLQWWADFLDVNR-ERFISPF 385 + ++L++R +Q WA++LD R + P Sbjct: 379 RTQYLKKRYDQVQMWANYLDRLRLGAEVVPL 409 >UniRef50_C4GIW0 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GIW0_9NEIS Length = 394 Score = 347 bits (890), Expect = 6e-94, Method: Composition-based stats. Identities = 132/385 (34%), Positives = 207/385 (53%), Gaps = 23/385 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + G +YWR++Y Y KQ LG+YP + L AR+ RD+ + LL+ G++P + Sbjct: 27 LYLQIDAKGRRYWRIKYTYNQKQHTQHLGIYPAMPLKAARMERDKIKLLLSQGINPKTHQ 86 Query: 61 KNDKVEQSK--ARTFKEVAIEWHGTNKK---WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + + + K TF+ VA +WH T + W HA RVL+ +E L LG +IA++ Sbjct: 87 EQQQRAEQKRITNTFEHVARKWHTTKAEKGDWKPAHATRVLRQIELYLIPPLGSLSIADI 146 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + D+L I+ VE +G++ A ++ AI +A + L YN A E+ + Sbjct: 147 EPLDILHAIQNVEHTGKIATANKVYDIAHAIFSFAARMKLCPYNAAAELKPELQQAKATP 206 Query: 176 RPALELK-RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 + + LL ID YTG P + ++L L+F R SELR +W++IDF+A+ + Sbjct: 207 YRHVTDTGELTALLQAIDGYTGSPQVKVLLQLAPLVFARPSELRLLKWADIDFQAACYH- 265 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 + K H+VPLS QALA+L +K G ++ +F + + KP+S Sbjct: 266 -----------KAAHEMKNGIAHIVPLSRQALALLSSLKPVTGHYEYVF-HNKAAGKPLS 313 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 E AL +G+ K V HGFR A + L E +S D +ERQ++H N+ RA+Y Sbjct: 314 EAAARKALSRIGWLDK--VTLHGFRHTASTLLHEQ-QYSSDWIERQLAHKDPNTTRASY- 369 Query: 355 HKAEHLEERRLMLQWWADFLDVNRE 379 + A+HLE+RR M+Q WADFLD ++ Sbjct: 370 NFAKHLEQRRQMMQEWADFLDSLKD 394 >UniRef50_Q48NQ4 Prophage PSPPH01, site-specific recombinase, phage integrase family n=2 Tax=Pseudomonas RepID=Q48NQ4_PSE14 Length = 391 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 118/377 (31%), Positives = 199/377 (52%), Gaps = 20/377 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V GSK WR ++R GK+ A+G YPE++L+DAR RD AR L+ +G +P + Sbjct: 26 LYLEVTTGGSKLWRYRFRLAGKENTYAIGAYPEVSLSDARTERDAARDLVKSGRNPAHVR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +K +Q TFK V+ EW + ++ + ++ ++ ++++ +G + E+ Sbjct: 86 QTEKAQQLTENRNTFKIVSQEWIEKRLAQRTQKYRDQIERAFVNDVYPRIGRLPLREITA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L I A++ +A ++Q +A+ Y V + D +PA + GA+ H Sbjct: 146 AQVLEIITAMDRRNATTLALMVRQWISAVFCYGVATLRADSDPASAVRGAIRRNEVNHSR 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + L + E + +Y G T A+ L ++F+R+ ELR A WSE D +A++WTIP Sbjct: 206 PMSLIELREYFRAVKTYGGHRRTVIALYLLPILFVRTIELRLAEWSEFDLDAALWTIPAR 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K R HLVPL ALA+L+++++ + L+F G +P+S T Sbjct: 266 R------------MKKRKIHLVPLPESALALLRELREITAGN-LLFPGMRHPKEPISATT 312 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +N AL M H FR A + L ES LWS D +E Q++H+ + +AAY H A Sbjct: 313 LNRALEYMDLKG---WHCHDFRATASTHLYESELWSSDVIEFQLAHVEQKKSKAAYNH-A 368 Query: 358 EHLEERRLMLQWWADFL 374 +L R+ ++QWW +++ Sbjct: 369 SYLPARKALMQWWDNYI 385 >UniRef50_UPI0001AF6377 prophage PSPPH01, site-specific recombinase phage integrase family protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF6377 Length = 393 Score = 344 bits (884), Expect = 2e-93, Method: Composition-based stats. Identities = 114/382 (29%), Positives = 194/382 (50%), Gaps = 20/382 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P G+K WR ++R GK+ A+G YP+++L+DAR RD AR+L+ G +P + Sbjct: 26 LFLEVTPGGNKLWRYRFRLAGKENTYAIGSYPDLSLSDARAERDAARELVKLGRNPAHVR 85 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K +Q + TFK VA EW + + ++ ++ ++++ +G + E+ Sbjct: 86 QTVKAQQLSENSNTFKVVAEEWIEKRLANRTLKYRDQIRRAFVNDVYPKIGRFPLREITA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L I ++ +A ++Q +++ Y V + D +PA + GA++ + H Sbjct: 146 AQILVIITQMDKRDATTLALMVRQWISSVFCYGVVTLRADSDPAAAVRGAISRKDVNHSR 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + L+ + E + Y G T A+ L L+F+R+ ELR A WSE D + +IW IP Sbjct: 206 PMNLEELAEYFLAVGKYGGHRGTVIALYLLPLLFVRTVELRLAEWSEFDLDKAIWIIPSG 265 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K + H+VPL +A+A+L++++ + L+F G +P+S T Sbjct: 266 R------------MKRKRPHMVPLPERAIALLRELRSLTAGN-LLFPGMKHPSQPISATT 312 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +N AL M H FR A + L ES LW +A+E Q+SH + +AAY H A Sbjct: 313 LNRALEYMDLRG---WHCHDFRATASTHLYESQLWRSEAIEMQLSHKESDKTKAAYNH-A 368 Query: 358 EHLEERRLMLQWWADFLDVNRE 379 ++ +ER M+ WW L+ Sbjct: 369 KYWDERSKMMVWWGHRLEPLIA 390 >UniRef50_B1Y106 Integrase family protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y106_LEPCP Length = 429 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 144/411 (35%), Positives = 215/411 (52%), Gaps = 39/411 (9%) Query: 1 MHLL-VHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++LL + G+ WRL Y + GK+K L+LG YP+ L+ AR + EAR L+A G DP + Sbjct: 35 LYLLPLVKGGAHGWRLDYTFNGKRKTLSLGTYPDTGLSLARKKAAEARTLVAEGTDPSEH 94 Query: 60 KKNDKVEQSKAR------------------TFKEVAIEWHGTNKK-WSEDHAHRVLKSLE 100 +K K E+ + + + VA +W W+E H + SL+ Sbjct: 95 RKGVKEERERQHLAGQEAAQRAAAGLAEPGSLEAVAADWLQHRAGAWTEGTRHNIAGSLK 154 Query: 101 DNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNP 160 +F LG R + E+ ++ ++ +E SG E A R+ QR A+ RYAV L+ +P Sbjct: 155 RYVFPTLGRRPVGEIAPGEIRTCVQRIEASGAAETAGRVFQRLRALYRYAVAHELVAADP 214 Query: 161 AQEMAGA--VASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELR 218 + + + +HRPA+ + P L K+ Y G P R A+ L +L +R ELR Sbjct: 215 TYPLKPSEIFRPRDTKHRPAMSAQEAPAFLRKLADYGGDPTVRNALLLLVLTAVRPGELR 274 Query: 219 FARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA 278 A W+EID A++W IP KM+ HLVPLS QALA+L++++ G Sbjct: 275 AAEWTEIDEAAALWRIPAAH------------MKMKAEHLVPLSVQALAVLEEMRALTGT 322 Query: 279 HDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVE 338 LIF +P SENT+NSAL MGY K E HG RT+ +S E+G D +E Sbjct: 323 QALIFPSPFYPGRPFSENTMNSALARMGY--KGEATAHGMRTLFSTSANEAG-HRGDVIE 379 Query: 339 RQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER-FISPFEYA 388 RQ++H R+ VR AY ++AE++ ERR ++ WW + +D R + PF+ A Sbjct: 380 RQLAHEERDDVRGAY-NRAEYMAERRRLMTWWGERVDSMRRGAEVIPFKAA 429 >UniRef50_Q1Q875 Phage integrase n=3 Tax=Gammaproteobacteria RepID=Q1Q875_PSYCK Length = 452 Score = 344 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 126/401 (31%), Positives = 207/401 (51%), Gaps = 25/401 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV +G++ W YR++GKQ+ LG YP++ LA+ARV + + L+ANG++P +KK Sbjct: 30 LQLLVRSSGTRTWVSAYRFDGKQQKTTLGTYPQMGLAEARVANADIKALVANGINPKNKK 89 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 + DK+ +A+TF + A+EW ++ + + ++ + + ++ D Sbjct: 90 RQDKLANEQAKTFNDYAVEWLEERERNVKPRTYQQDYNRMHKDVIPSFEGIALKDVTFED 149 Query: 120 LLAPIKAVEMSGRLEVA------ARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 +E E A R I+R A++ LI+ N + Sbjct: 150 CKLMADNIESRTNNEGASPREVTRRTIDLVGNILRRAMRERLIEVNHTDGLKELYPKAKT 209 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 +H +EL +P+LL I+ Y G TR ++ F R+ ELR +W IDF +W Sbjct: 210 KHMKHVELSELPKLLQDIEGYHGHDQTRLGMKFLAYSFCRTIELRMMKWEHIDFPNRLWR 269 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 + K+ H+VPLS Q LA+L+++K G ++ +F H+P Sbjct: 270 V------------DIDNLKIARKHVVPLSDQMLAVLEEMKHITGQYEYVFYH-TGMHQPY 316 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 SE +N+AL ++GY K GHGFR +A ++L E G + DA+E+QM+H ++S+RA Y Sbjct: 317 SEEFINNALDILGYGGKQ--TGHGFRHIASTNLNELG-YMGDAIEKQMAHDKKSSIRAVY 373 Query: 354 IHKAEHLEERRLMLQWWADFLDVNR-ERFISPFEYAKINNP 393 H A+HLEERR ++Q WADFLD+ R + + F+ A+ Sbjct: 374 NH-AQHLEERRKIMQVWADFLDLLRDKGEVIDFQTARQQIE 413 >UniRef50_C6XEE3 Integrase family protein n=2 Tax=Proteobacteria RepID=C6XEE3_METSD Length = 406 Score = 344 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 134/391 (34%), Positives = 222/391 (56%), Gaps = 27/391 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYE---GKQKMLAL--GVYPEITLADARVRRDEARKLLANGVD 55 ++L V+ NG+KYWR +Y GK+K ++L GVYPE++L DARV + + L+ NG+D Sbjct: 29 LYLWVYANGAKYWRFRYFIHVEGGKKKEMSLSLGVYPEVSLNDARVEARKYQGLVDNGID 88 Query: 56 PGDKKKND--KVEQSKARTFKEVAIEWH-GTNKKWSEDHAHRVLKSLEDNLFAALGERNI 112 P KK + + TF E+A EW+ W+E HA + + +E NL + ++ I Sbjct: 89 PATAKKAKLLQTKAEAGDTFAEIAREWYRKMMPTWTETHARDIERRIEINLIPFIPQKPI 148 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 AEL+ D L P++ V+ G ++ RL + +YA+ G Y+ + A+ Sbjct: 149 AELEAVDFLKPLEKVQERGATHLSHRLLINIRQVYKYAIAKGKCKYDVTPGLGNALIPHV 208 Query: 173 RQHRPALELKRIPELLTKIDSYT--GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 +++PA+ + +P+L+T I Y G + ++L +++R+ EL F RW E+D+EA+ Sbjct: 209 AKNQPAIRPEELPKLMTDIADYHKLGEMKVQLGLQLMAHVWLRTRELTFGRWDELDYEAN 268 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +W +P ER KM HL+PL+ Q IL++++ + I G + Sbjct: 269 LWRVPGER------------MKMDRDHLIPLTPQVKVILERLRVLARGSEYILPG-RNHL 315 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 P+S NT+ AL +GY K + GHGFR++A + L ESG ++ DA+ERQ++H+ N+VR Sbjct: 316 TPVSNNTLLYALYRLGY--KSRMTGHGFRSVASTILNESG-FNADAIERQLAHVPENAVR 372 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 AAY ++AE+++ERR M+ WW+++LD Sbjct: 373 AAY-NRAEYIDERRKMMLWWSEYLDKCTAPK 402 >UniRef50_B6BKY5 DNA integration/recombination/inversion protein n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BKY5_9PROT Length = 400 Score = 343 bits (881), Expect = 5e-93, Method: Composition-based stats. Identities = 124/387 (32%), Positives = 202/387 (52%), Gaps = 24/387 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLAN-GVDPGDK 59 ++L V+ NG K+WR +Y+Y K K ++LGVYP+ TLA+AR +RDEAR +LAN DP K Sbjct: 31 LYLEVNINGGKWWRFRYKYNDKIKKVSLGVYPDTTLANARRKRDEARNILANDNRDPFIK 90 Query: 60 KKNDKVEQSKARTFKEVAIEWH-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K E+ +TF+E A + + + S+ H R +K + +++ +G + + ++K R Sbjct: 91 IVVHKKEEVVQKTFQEWAEWYITEISTELSDTHITRTVKGFKKDVYPIIGSKRMNDIKAR 150 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQS--GLIDYNPAQEMA--GAVASCNRQ 174 D++ + ++ G +E A + + A+ + ID NP ++ + + Sbjct: 151 DIIKIMHIMKERGAVESARKTFSSINRVFAKALSNFPDEIDRNPTADIKLGDILGAKQTT 210 Query: 175 HRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 + P + E K + LL I YTG T A+ + F+R +R ARW EIDF W Sbjct: 211 NYPIITEPKELATLLKAIKEYTGDTSTILALTMIAHTFVRPINIRLARWDEIDFNTKQWV 270 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP + K + +VPLS Q + +LK+ K L+F PM Sbjct: 271 IPASK------------MKTKKELIVPLSKQVIELLKEAK---SDSALVFPSIRSKTSPM 315 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S+N + ALR MGY + E+ H FR + + E G+++ D +E Q++H +SV AY Sbjct: 316 SDNALVGALRRMGYS-REEIVAHSFRGIFSTIAHEKGIYAHDVIETQLAHTVGSSVSQAY 374 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRER 380 ++A++LEER M+QWW+D+L + Sbjct: 375 -NRAKYLEERTKMMQWWSDYLTTLPSK 400 >UniRef50_A9IRV8 Int3 protein n=1 Tax=Bordetella petrii DSM 12804 RepID=A9IRV8_BORPD Length = 402 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 130/383 (33%), Positives = 201/383 (52%), Gaps = 25/383 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HLLV PNGS+ WR ++R GK+++ A+G YP++ LA+AR R AR+L+A+GV P ++ Sbjct: 33 LHLLVQPNGSRLWRYKFRLGGKEQVFAIGRYPDVGLAEARERHLAARRLVADGVSPTAQR 92 Query: 61 KNDK------VEQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIA 113 ++D+ ++KA TFK V W T + + + + ++ L LG R + Sbjct: 93 RDDRARMAEDAARAKAGTFKAVLDSWKATPARALAPATIRQRDREIDRYLEPKLGARPVG 152 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 E+ R+L +K V + EVA L+ +I +AV GLI NP A+ + + Sbjct: 153 EITRRELADLLKTV-ATDTPEVARNLRTHMNSIFEHAVDVGLIAGNPTPG-PRALPARKQ 210 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 PA+ + + LL ID+ +P T+ A L LL R E+ RW EID +A W Sbjct: 211 TSHPAVAMDELGALLASIDASACQPATKAAFRLLLLTACRKLEITSGRWDEIDLDAGEWL 270 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP +R K RT H VPLS QA+ +L+ ++ G D +F + PM Sbjct: 271 IPADR------------MKTRTAHWVPLSRQAVELLRAVRAHSGG-DYVFPHRDKPNTPM 317 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S +N LR +GY + E+ HG R++ + + D +ER ++H R+ VRAAY Sbjct: 318 SPTALNEMLRRVGY--RREMTVHGTRSIFSTWANAQPGANVDVIERCLAHAPRDKVRAAY 375 Query: 354 IHKAEHLEERRLMLQWWADFLDV 376 ++ + +ERR +LQ WAD LD Sbjct: 376 -NRHAYKDERRALLQSWADVLDA 397 >UniRef50_Q5E028 Phage family integrase n=2 Tax=Vibrionaceae RepID=Q5E028_VIBF1 Length = 399 Score = 343 bits (880), Expect = 8e-93, Method: Composition-based stats. Identities = 113/382 (29%), Positives = 197/382 (51%), Gaps = 21/382 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG- 57 + L V P G+K W+ ++ K + +ALG YPE++LA+AR + E R LLA ++P Sbjct: 31 LQLRVRPTGAKSWQFKFSDPVTRKIQKIALGPYPELSLANARSKTTEYRTLLAQKINPKS 90 Query: 58 -DKKKNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++ K + ++ + TF VA +W K S H++R ++LE +F + + +A + Sbjct: 91 FEQSKELEAKRVQTSTFIVVAEQWFERKKETVSPAHSYREWRTLEKYIFPHMSKIPVATI 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + + ++ +E G+ R+ Q IM Y+V GLI NP ++ H Sbjct: 151 TAVETIDVLRPLEKEGKYSTVKRICQSLNQIMDYSVNHGLIHANPLAKIIKVFRKNTVLH 210 Query: 176 RPALELKRIPELLTKIDS-YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 P + +++P+ L ++ S T + T+ I L R E RW +ID E +WTI Sbjct: 211 MPTIRPEQLPDFLKRLHSCSTIQTKTKLLILWQLHTMTRPKEAATTRWIDIDLEKGVWTI 270 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E K R H +PL++QA+ IL QI+ D +F G+ D + +S Sbjct: 271 PAE------------NMKRRKEHRIPLTSQAINILNQIRLQSKRCDYVFPGERDINSHVS 318 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 T N+A++ K E+ HG R +A ++L E G + +E +SH +N VRA+Y Sbjct: 319 LFTANAAIKR-SLGLKDELVAHGLRAIASTALHEYG-FDSLLIEACLSHADQNEVRASY- 375 Query: 355 HKAEHLEERRLMLQWWADFLDV 376 +++++LE+R+ ++ WW++++D Sbjct: 376 NRSDYLEQRKEIMCWWSNYIDE 397 >UniRef50_A6VC70 Integrase n=11 Tax=Proteobacteria RepID=A6VC70_PSEA7 Length = 395 Score = 343 bits (880), Expect = 9e-93, Method: Composition-based stats. Identities = 127/384 (33%), Positives = 198/384 (51%), Gaps = 19/384 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V PNG K WR +++ GK ALG YP ++LADAR + +EARKL+ G++P + Sbjct: 25 LYLEVKPNGVKAWRYRFKLAGKGSWFALGDYPSVSLADARDKCEEARKLVKQGINPVQNR 84 Query: 61 KND--KVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + K EQ A TF+ VA EW K W E R L L+ +F ++G+ + ++ Sbjct: 85 QVERIKREQDSANTFEAVAKEWLAL-KDWEEVTKRRRLDMLQRVVFPSIGKMPVRQITPA 143 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 +L + G VAA ++ + I AV + D +P + A+ + QH+ A Sbjct: 144 HVLDILSKTAKRGAPTVAAEAKRTMSGIFELAVATLRADNDPVWPVRKALPANKTQHKTA 203 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L +I +LLT D++ + I+L R E A W+E D + ++W+IP R Sbjct: 204 LTTAQIGKLLTDFDNHRCGYQVNFCIQLMWWTLARPGEAAEAEWAEFDLDKALWSIPARR 263 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K R HLVPL QA+ +L+++ G +F G D +KPMS +++ Sbjct: 264 ------------MKARREHLVPLPRQAVEMLRRLHAISGDRMHLFPGRDDRNKPMSAHSI 311 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 AL+ +G+ HG RT + L E G + DA+E Q++H NSVR Y H A Sbjct: 312 RQALKALGWSGT--YSPHGTRTTGSTRLNEMG-YRPDAIEAQLAHAEPNSVRRTYNH-AT 367 Query: 359 HLEERRLMLQWWADFLDVNRERFI 382 +L+ERR M+Q WAD L++ + + Sbjct: 368 YLDERREMMQAWADKLELWKREVL 391 >UniRef50_C7HXY0 Integrase family protein n=1 Tax=Thiomonas intermedia K12 RepID=C7HXY0_THIIN Length = 392 Score = 342 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 121/390 (31%), Positives = 193/390 (49%), Gaps = 26/390 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WR Y GKQ+ G YP +TLA AR +A+ P + Sbjct: 26 LYLFVAPTGLKSWRANYELNGKQRTRTYGRYPAMTLAQAREAHTQAKST------PAEAA 79 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKW--SEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + A TFK + +W + H +V +LE + A+G+ I ++ Sbjct: 80 TVTPIAK-VAPTFKAITEQWLKIKLPSLSNGKHQGQVAGTLERFAYPAIGKLPIDQIPRT 138 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH-RP 177 L+ ++AV+ GR+E A R+ R A+ YA G I+ + A + + + Sbjct: 139 KLVEVVQAVQKGGRVETAHRVAGRIAAVFDYAQDVGYIESHGAAGLVRVLQPRKVKKPMA 198 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 ++ LL ID Y P+TR ++L L F+R E+R RWSE+ + ++W +P + Sbjct: 199 SIPPGEAGALLAAIDGYE-EPVTRLGLQLLALTFVRVGEMRGMRWSELREDGTVWVVPAD 257 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K H+VPLS QA A+L+Q++ G +L+ +SENT Sbjct: 258 R------------MKAGLPHVVPLSQQARAVLEQLRVLTGDRNLVLDSPLRPGHALSENT 305 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 AL +GY + HGFR +A + L E ++ D +ERQ++H ++VRAAY ++A Sbjct: 306 FLFALYRLGYRG--RMTAHGFRALASTVLNEQSGFAHDVIERQLAHRETDTVRAAY-NRA 362 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFEY 387 ++L++RR ++QWWAD+LD RE P Sbjct: 363 QYLDQRRGLMQWWADWLDRQRESDRPPVSA 392 >UniRef50_A9IGA6 Phage-related integrase n=50 Tax=root RepID=A9IGA6_BORPD Length = 657 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 119/395 (30%), Positives = 202/395 (51%), Gaps = 18/395 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L+V G K W +Y + GKQK +ALG YP ++L +AR RD+A+ L+A G+DP ++ Sbjct: 40 LSLMVSAAGGKSWMFRYSWLGKQKRMALGGYPALSLREARAERDKAQALIARGIDPQIER 99 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNKKWSE----DHAHRVLKSLEDNLFAALGERNIAE 114 + + + TFK V W +K + ++L+ ++ LG+ +I + Sbjct: 100 DQRRHAAKLAGEYTFKNVFDAWVEHRRKELKEGRQSTLSQILRIFNKDVLPTLGKMSIYD 159 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYA--VQSGLIDYNPAQEMA-GAVASC 171 ++ LL + A+E A +++ + RYA + GL + NPA ++ A Sbjct: 160 IRRPQLLGVLAAIEKRKAFTTAEKVRTWFNQMFRYALVIAEGL-EVNPAADLDVVAEPKP 218 Query: 172 NRQHRPALELKRIPELLTKIDSYTGR-PLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 H P L L +PE L K+ Y R T+ + L L +R+ ELR A + D + Sbjct: 219 PVAHNPYLHLPELPEFLQKLRRYNPRGWQTQLGVRLLFLTGVRTGELRLAEPEQFDLDRG 278 Query: 231 IWTIPPE--REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIK-QFYGAHDLIFIGDH 287 W IPPE ++ ++ + + + ++VPLS QA+ I++ + A + Sbjct: 279 FWIIPPEVVKQLQDEMRKAGKRPQDVPPYIVPLSLQAIEIVRYLLGVMRPAQKYLLSHRS 338 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 + K +SENT+N A+++MGY+ + GHG R ++L E G + + V+ Q+SH N Sbjct: 339 ELKKRISENTLNKAVQLMGYEG--RLTGHGIRGTISTALNEIG-YPKIWVDAQLSHSDPN 395 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFI 382 V +AY H A+++E RR M+Q WAD LD+ + + Sbjct: 396 KVSSAYNH-AKYVEPRRRMMQDWADRLDLLEQGEV 429 >UniRef50_B1Y4T5 Integrase family protein n=3 Tax=Betaproteobacteria RepID=B1Y4T5_LEPCP Length = 427 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 136/371 (36%), Positives = 208/371 (56%), Gaps = 25/371 (6%) Query: 1 MHLLV------HPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGV 54 ++L V P+GSK WR +YR+ GK+K+LA+G YP +++A AR + +AR LL G Sbjct: 27 LYLEVKPPGAKTPSGSKLWRWKYRHGGKEKLLAIGAYPAVSVAGARREQAKARALLDAGT 86 Query: 55 DPGDKKKNDKVEQSKAR--TFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLFAALGERN 111 DPG+ +K K + +F+ VA +W +E +A VL+ LE + F +G + Sbjct: 87 DPGEARKEAKYAKLNEHETSFEAVARQWWAGWKANKTERYAEYVLRRLELDAFPVIGAKP 146 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG--AVA 169 +A L D + K +E G E+A R+ + + +MR+AV GL + NP ++ + Sbjct: 147 VAGLTAPDFVRMAKKIEARGVGELARRIMETSGQVMRWAVAHGLTERNPTADVKPGDILK 206 Query: 170 SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 ++ + +P+L+ I++Y G TR A++L L F+R+SEL A+W E D +A Sbjct: 207 PRTVENFARVGAAELPDLMRHINAYDGSVFTRLALQLMALTFVRTSELIGAQWQEFDLDA 266 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD-----LIFI 284 + WTIPP+R G + R HLVPL+ QALA+L+ ++ GA L+F Sbjct: 267 AEWTIPPDRIGRKGRQGE------RRAHLVPLAPQALAVLRLLQSARGADRCRGPALLFP 320 Query: 285 GDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM 344 G+ D +PMS NT+ AL MGY K + GHGFR +A ++L E G + D +E Q+SH+ Sbjct: 321 GERDHERPMSNNTMLKALERMGYKGK--MTGHGFRGIASTALNEMG-FRFDVIEAQLSHI 377 Query: 345 ARNSVRAAYIH 355 N VRAAY H Sbjct: 378 EGNRVRAAYNH 388 >UniRef50_Q4QL03 Prophage CP4-57-like integrase n=11 Tax=Haemophilus RepID=Q4QL03_HAEI8 Length = 419 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 116/392 (29%), Positives = 197/392 (50%), Gaps = 23/392 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + LLV NGSK WR QY K+ +++LGVYPEI+L DAR RD R LLA +DP D Sbjct: 35 LFLLVKMNGSKIWRFQYYKPISKKRTLISLGVYPEISLKDAREIRDLYRSLLAKNIDPQD 94 Query: 59 KK--KNDKVEQSKARTFKEVAIEWHGTNK------KWSEDHAHRVLKSLEDNLFAALGER 110 + + K Q + T E+ EW K + E + K LE +LF LG Sbjct: 95 YRLQQEQKAIQERQFTLSEMGKEWLYLKKNEVDTGRLKEVTFIDIGKRLERHLFKVLGHY 154 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 +I+E+ + +K +E +G+L+ R+ IM Y+V G+I+YN ++ Sbjct: 155 SISEISAPLAIEKLKPLERAGKLDTLHRIIGYLNQIMIYSVNRGVINYNATADIGRVFIR 214 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 ++ P + +++P+L + + T TR A+EL LL R+ + W +DFE S Sbjct: 215 PIAENNPTIRPEQLPKLFEDLQNSTLEIETRCALELLLLTAGRAGAITQLEWENVDFENS 274 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY-GAHDLIFIGDHDS 289 + IP E+ K ++PLS QA+ IL+ +++ +F + Sbjct: 275 LLNIPKEKMKGRQGKV--------QDFILPLSKQAVTILRLLQKLNRCNSKFVFPSKKNP 326 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 +P+S+ T N AL +GY + HG R++ +++ E+ ++ + +E ++H +SV Sbjct: 327 RQPISKETPNKALGRIGYRNI--LTAHGLRSVFSTAMNEA-EFNSEIIEVCLAHFEYSSV 383 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 R Y +KA+++ +R +QWW +F++ + Sbjct: 384 RGTY-NKAKYMPQRIEYMQWWGNFVEEASDGK 414 >UniRef50_D0SZI9 Integrase n=14 Tax=cellular organisms RepID=D0SZI9_ACILW Length = 401 Score = 342 bits (877), Expect = 1e-92, Method: Composition-based stats. Identities = 111/386 (28%), Positives = 175/386 (45%), Gaps = 22/386 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V PNG K W +Y G K+ + LG YP ++L +AR RDE + + Sbjct: 26 LSLKVEPNGRKSWSYRYSLAGTNKRPRMKLGEYPVMSLKEARSVRDEYK---------FN 76 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHR------VLKSLEDNLFAALGERNI 112 +N + + +TF+++ EW K S + R K L+ +++ +G Sbjct: 77 NYENKPLHKKYIKTFQDICEEWLEFKIKNSFEDEPRCGVIQLAKKCLDQDVYPNIGLMPF 136 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 E+K DL+ IK +E E + I YAV G +YN A + + + Sbjct: 137 IEIKRYDLVKIIKKIESRNVKEPVKKAYSYLNQIYDYAVAMGYCEYNIAHGLHKILVNNK 196 Query: 173 -RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 +++ P L + L K++ P+ + A+ L +R EL D + I Sbjct: 197 IKKNYPHLNSDELSNFLAKLNQINTDPIIKKALLFKLYTGVRGGELLLCEPHHFDLDKKI 256 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W IP K VPLS QAL ++K + +F +++K Sbjct: 257 WKIPALHIKQYRRKVILGH--DIPDFFVPLSDQALEVVKSALVWSHGEKYVFSSPRNNNK 314 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 P+ NT+N +R MGY TK E+ HG R+ + L ESGL+ + +E Q+SH +N RA Sbjct: 315 PIHFNTLNLIIRKMGY-TKNELTSHGLRSTFSTILNESGLFQSNWIEAQLSHTDKNKTRA 373 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVN 377 +Y H AE+ +R M+QWW DF+D Sbjct: 374 SYNH-AEYFNQRMEMMQWWGDFIDSC 398 >UniRef50_A9I0E1 Phage-related integrase n=5 Tax=Burkholderiales RepID=A9I0E1_BORPD Length = 536 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 128/413 (30%), Positives = 215/413 (52%), Gaps = 23/413 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V G K W +Y + K L +G YPE+TLA AR + EA ANG+DP + + Sbjct: 126 LYLRVRITG-KAWIYRYMKDSKPIKLGMGPYPEVTLAQARTKAYEANSQRANGLDPKEVR 184 Query: 61 KN--DKVEQSKARTFKEVAIEWHGTNKK---WSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + ++ ++ TF+ +A WH + KK WSE +A +V++ LE ++F +G + I + Sbjct: 185 EQLAEQTRIARLHTFELLARAWHASAKKDREWSEGYAQKVIRHLEIHIFPWVGHKPIEMI 244 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID--YNPAQEMAGAVASCNR 173 +++ + + G LE A R+++ + +YAV G ++ N + G + Sbjct: 245 LPTEIVRCLHRPKDRGNLETAQRVREAVQHVYQYAVDVGALEPSKNFVNKNTGGLPPPRS 304 Query: 174 QHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 +H A+ E ++ +LL I SY G+ +TR A+ L ++F R ++R A W +I E +W Sbjct: 305 RHFAAITEPAQLGQLLRDIRSYHGQFITRCALRLAPMMFQRPGQIRLADWEDISLEVELW 364 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG---DHDS 289 PPE+ + + + H+VPL QAL IL+++ G +F + Sbjct: 365 RCPPEKMKMREWQKRDSRT---PAHIVPLPRQALEILRELHPLTGPTGPVFRSMSRRSEK 421 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 + +S+NT+N+ALR MGYDTK E+ GHGFR A + + E W D +ER ++H + + Sbjct: 422 SRYISDNTINAALRTMGYDTKEEITGHGFRATARTMIREHLGWEPDVIERHLAHTSDEEL 481 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNR-------ERFISPFEYAKINNPLK 395 ++Y +A + +R+ M+Q WADFLD E I F + L+ Sbjct: 482 GSSY-DRAAFIAQRKAMVQQWADFLDELEVGQMPMPEDNILQFIRHRPRPALR 533 >UniRef50_Q8W6M6 Putative uncharacterized protein orf1 n=1 Tax=Sinorhizobium phage PBC5 RepID=Q8W6M6_9CAUD Length = 433 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 126/402 (31%), Positives = 197/402 (49%), Gaps = 18/402 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V G+K WRL+YR++GK+K L +G YP+++LADAR R+ A++ L +G DP K Sbjct: 27 LNLFVLSTGTKSWRLRYRFDGKEKTLVIGNYPDVSLADARGEREAAKETLKSGRDPNVVK 86 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K +Q A TF+ +A EWH K W E HA VL SL +++F +G+ I ++ Sbjct: 87 KIEKAIGKQQAADTFEVLAREWHKLQKPTWVEKHASDVLDSLVNDVFPIIGQMPIRDIDA 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L ++ VE E A R++QR +AI Y + SG +PA + GA+A + +P Sbjct: 147 PTVLGVLRLVEQRDAKETARRIRQRISAIFVYGIASGRASEDPAAVVRGAMAPMKKGRQP 206 Query: 178 ALE-LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARW---SEIDFEASIWT 233 A+ L + E+L P+T+ + L L +R L W E+D +W Sbjct: 207 AITNLDKAREMLVATWKTPSHPVTKLGLRLLTLTAVRPGTLISTPWTELDEVDESDPVWV 266 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP R + HL+PLS +A+ + ++ G + +HKPM Sbjct: 267 IPAARMKLLLQHKDDET----RDHLIPLSKEAMETITVLRSLTGRGPFVLPNGRHAHKPM 322 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 SEN + L GY K HGFR+ + + E R ++ ++H ++ V AY Sbjct: 323 SENALGYLLNRSGYHHK--HVPHGFRSTFSTVMNERYPADRQVIDLMLAHTPKDKVEGAY 380 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERFISPFEYAKINNPLK 395 ++AEHLE R+ + Q W D P + P K Sbjct: 381 -NRAEHLERRKELAQIW----DGLIITKDMPTAQELLTGPRK 417 >UniRef50_B3A9A3 Prophage integrase n=2 Tax=Escherichia coli O157:H7 RepID=B3A9A3_ECO57 Length = 412 Score = 340 bits (872), Expect = 7e-92, Method: Composition-based stats. Identities = 114/389 (29%), Positives = 189/389 (48%), Gaps = 26/389 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V G K WR +Y + K++ +G +PE +LA+AR RDE R+++A GVDP Sbjct: 29 LLLNVSKAGGKVWRFRYSHPITKKRQTYTIGRFPEFSLAEAREVRDELRRMIARGVDPVT 88 Query: 59 KKKNDKVEQ--SKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 +KKN K+E +TF+ VA W K + + + + L G+ +I + Sbjct: 89 EKKNRKIEMSLKNLQTFEAVANAWFAFKKGSELRKPTLYNIEYEVYKYLVPFFGKYSIEK 148 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 + + + AV L+ +L R IM YAV G + NP ++ A + Sbjct: 149 ITAPVAINALDAVSDKNALQ--KKLISRLNEIMNYAVNCGALKANPLLKIKTAFTGKKNK 206 Query: 175 HRPALELKRIPELLTKIDSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 AL ++R+PE L+ DS + A+ +L +R E A WSEIDF++ +W Sbjct: 207 SLAALPVERLPEFLSWWDSVPHTYQIAHNALLFQILTMVRPGEAIKAEWSEIDFDSGLWI 266 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP + K H+VPLS+QA++IL+ +++ +F PM Sbjct: 267 IPAHK------------MKCHREHVVPLSSQAISILRTMQEI-KRGRYVFFSSRTKDAPM 313 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 NT+ + + + V HGFR+M + L E G ++ D +E ++H + + +R Y Sbjct: 314 GRNTIKTPIAASKFKGI--VTLHGFRSMWSTLLNEEG-FNPDVIEAALAHKSGDKIRDIY 370 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERFI 382 ++ +LE+R++M+QW DF D R+ I Sbjct: 371 -NRTIYLEQRKIMMQWVGDFFDDARKGVI 398 >UniRef50_B9NUX0 Site-specific recombinase, phage integrase family n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NUX0_9RHOB Length = 404 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 142/384 (36%), Positives = 211/384 (54%), Gaps = 18/384 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++LV PNGSK+W L YR+ GKQK+++ G YP I+L +AR +RD RK L G+DP K Sbjct: 26 LYILVKPNGSKHWHLHYRFLGKQKVMSYGPYPLISLKEAREKRDRDRKFLIEGIDPMVVK 85 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K E+++ F +A E N+ + + + L + L + + E+ Sbjct: 86 KERKLASERAQRGRFDILAAELLEKNRVEGRAEQTLKKKAWLVEMANKDLAKLAVMEITP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 D+LA +K E +G LE A+RL+ + RYA+ GL + +P + GA+ + R Sbjct: 146 SDVLAVLKKQEKAGNLETASRLRTTIGEVFRYAIACGLTENDPTIPLKGALVQKRPRSRS 205 Query: 178 ALE-LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ +R+ ELL I++Y+G + + L L+ +R ELRFA+W E D EA WTIP Sbjct: 206 AITNPERLGELLCSIENYSGYRVVALGLRLLALLHVRPGELRFAKWEEFDLEAGKWTIPA 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER KMR H+ PL TQA+ IL+++++ ++ P+SEN Sbjct: 266 ER------------MKMRQPHVAPLPTQAIDILRELQRISHPDGMVLPSQRRRIDPLSEN 313 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T N ALR+MGY K E+ HGFR + ESG W+ DA+ER ++H+ N VR AY ++ Sbjct: 314 TFNKALRMMGYS-KEEMTAHGFRATFSTLANESGEWNPDAIERALAHVDSNEVRRAY-NR 371 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 A EER M QWWAD L+ + Sbjct: 372 AAFWEERVEMAQWWADGLEKLQRA 395 >UniRef50_Q46Z79 Phage integrase n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Z79_RALEJ Length = 418 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 135/394 (34%), Positives = 208/394 (52%), Gaps = 14/394 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKM--LALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L + P+G+K WR++Y+ G + L G YP + L+ AR RR+EAR LA G DP Sbjct: 32 LYLELLPSGAKKWRMKYQRPGSKSENLLTFGDYPAVGLSAARERREEARAQLAVGTDPAL 91 Query: 59 KKKNDKV--EQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + K ++ TF+ VA EW + WS +A + + LE +L+ LG+ IA + Sbjct: 92 ARDLAKATVAEAARNTFRAVAEEWLKHRHDTWSASYAQKTKQLLERDLYPDLGQHPIASI 151 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS-CNRQ 174 LL + +E G E+ R I +YA+ +G + + M + + Sbjct: 152 TPAFLLTVARKIEARGAYEMPRRALVTAGQIFQYAIGTGRASIDASAGMVAQLKPRPPVK 211 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H P + ++P+LL +ID YTGRP T A++L +L FIR ELR+A WSE+D E + W + Sbjct: 212 HYPHVADTQLPDLLQRIDRYTGRPETIAAVKLAVLTFIRGGELRYAEWSELDLEKAEWHV 271 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P R T H+VPLS Q +A+L+ +KQ+ G + L+F G KP++ Sbjct: 272 PSGRMKGRLWHKL-----SGTPHVVPLSRQTIALLEDLKQYTGHYALLFPGAVSVLKPVT 326 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 +N +G+ K + HG R +A + L ESGL+ +E Q+SH N AAY Sbjct: 327 GEAMNKVFHSIGF--KGQQTVHGLRGLASTLLNESGLFDPRVIEAQLSHKETNKTIAAYN 384 Query: 355 HKAEHLEERRLMLQWWADFLDVNRERFISPFEYA 388 H A++L ERR ++QWWAD++D +P +A Sbjct: 385 H-AKYLPERRRVMQWWADYIDQRARATTAPQRHA 417 >UniRef50_B2I529 Integrase family protein n=3 Tax=Proteobacteria RepID=B2I529_XYLF2 Length = 410 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 105/380 (27%), Positives = 177/380 (46%), Gaps = 16/380 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + V+P G WR +YR G+ + L LG YP ++L +AR++RDEA L+A G P +K Sbjct: 26 LSVEVYPTGGIVWRFRYRLAGRYEKLTLGKYPALSLRNARLKRDEAASLVAMGTSPARQK 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + KV + A T ++ A + + + + L+ ++ +G++ + E+ ++ Sbjct: 86 QLAKVTAADAMTVRDFAERFFREIQSRDRKDSTMPRRYLDKDILPFVGDKPMREVTAEEI 145 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + I + G A +++ + YAV GL+ NP + AL Sbjct: 146 RSLIWRKKEQGFDATAGQIRGVLKRLCDYAVTCGLMPTNPVLALPMRHVYKAVSRDRALS 205 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 I L + + R + A+ L LL +R SEL ARW + + + W IP E Sbjct: 206 PDEIRLFLRAVWASRIRRQFKLALHLILLTMVRKSELLLARWDHVHLDQAQWHIPAEH-- 263 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 SK H+V LS QA+ + + ++ G L+ G +P + N +N Sbjct: 264 ----------SKTGKPHIVYLSRQAVVLFEALRVLAGGSALVMPGSGTLTRPFAHNALNH 313 Query: 301 AL-RVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEH 359 AL + M + H R A + L E G W+ D VE+ ++H VR Y ++AE+ Sbjct: 314 ALGKAMQWQGIHAFTIHDLRRTASTWLHEHG-WASDVVEKALNHSIGG-VRGVY-NRAEY 370 Query: 360 LEERRLMLQWWADFLDVNRE 379 ++RR MLQ WADF++ + Sbjct: 371 ADQRRQMLQCWADFIEKQLK 390 >UniRef50_A6F4S5 Putative integrase n=1 Tax=Marinobacter algicola DG893 RepID=A6F4S5_9ALTE Length = 437 Score = 339 bits (870), Expect = 1e-91, Method: Composition-based stats. Identities = 139/386 (36%), Positives = 204/386 (52%), Gaps = 25/386 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + P+GSK+WR +YR GK M +G YP IT+++AR RD A+K +ANG P + K Sbjct: 25 LALEIRPSGSKFWRYRYRLHGKAGMYTVGEYPTITISEARAIRDWAKKCVANGEAPAEVK 84 Query: 61 KNDKVEQS--KARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K + E+ +A T +EV EW NK WS + +V + LE +++ LG++ I ++ Sbjct: 85 KRELAERRAEQANTLEEVGKEWIARNKAGWSVYYHRQVTRMLEADIWPNLGKKGIRDITP 144 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LA ++ VE VA L+Q AI R+A+ + D +P + GA+ +H+P Sbjct: 145 AQMLAELQRVEER-APTVAVNLKQWLAAIYRHAIATLRADNDPTAPLRGAIKKPKAKHKP 203 Query: 178 ALELKRIPELLTKI---DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDF--EASIW 232 + L +L I + +T AI L L R+ E+R ARW + D E W Sbjct: 204 SYNLDEFGKLCRAIWPKEGAIAYRITEIAIRLLALTMARTVEVRSARWDQFDLESEEPTW 263 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 TIP E+ K THLVPLS+QA+ +L++++ G F +P Sbjct: 264 TIPGEK------------MKRGVTHLVPLSSQAVELLRELEGLTGNRPYCFPNLRQPTEP 311 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 MS T+N L +GY GH FRT A + L G + D VERQ++H N RA+ Sbjct: 312 MSATTINRVLERLGYGGL--FSGHAFRTTASTLLNNYG-FDGDWVERQLAHTEENKSRAS 368 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNR 378 Y H AE+L +RR+MLQWWAD +D R Sbjct: 369 YNH-AEYLYQRRIMLQWWADLVDTLR 393 >UniRef50_Q5P707 Phage-related integrase n=2 Tax=Proteobacteria RepID=Q5P707_AZOSE Length = 415 Score = 339 bits (869), Expect = 1e-91, Method: Composition-based stats. Identities = 124/383 (32%), Positives = 189/383 (49%), Gaps = 20/383 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P+G+K+WR ++R KQ M ALG YP + L DAR RDEAR+L+ G++P + Sbjct: 25 LCLEVRPSGAKFWRYRFRLADKQNMHALGEYPAMGLQDARRARDEARELVRKGINPSHHR 84 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 +K E+ + TF+ V EW N+ WS ++ +V + ++F +G+ IA+LK Sbjct: 85 GLEKAERILALGSTFETVTAEWIERNRPDWSANYIRQVRARMAGDVFPEIGQYPIADLKA 144 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LA ++ VE AA ++ + R+AV L + +P + AV H Sbjct: 145 AHVLAMLRKVEKR-SPTQAALVKTWVGGVFRFAVVEQLREDDPTFPLRRAVKPTQVNHHA 203 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L I L I + G + A+ L R +E+ ARW+ ID +A +WTIPP Sbjct: 204 ILRNDEIGAFLRAIAAAPGEVTVKEAVGLMWATACRINEVTGARWAGIDLDAGLWTIPPG 263 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K + H+V L+ QA+ IL++++ G + +F D +PMS Sbjct: 264 R------------MKAKQEHVVTLTRQAVEILRRVQVHTGTLEHVFPHRSDRKRPMSGEA 311 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 V R GY K HG R + +G W D +E ++H RN +R AY H A Sbjct: 312 VRDLFRRAGYAGK--FTPHGVRGTFSTIANGAG-WRADVIELCLAHQERNQIRRAYNH-A 367 Query: 358 EHLEERRLMLQWWADFLDVNRER 380 + L+ERR +LQWW D D + Sbjct: 368 QLLDERRELLQWWGDLSDQAKRG 390 >UniRef50_A6SWC6 Prophage integrase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWC6_JANMA Length = 414 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 125/388 (32%), Positives = 209/388 (53%), Gaps = 15/388 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQK--MLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 M+L + P+GSK WR+ YR E + L G YP + LA+AR +R + +K + GVDP Sbjct: 31 MYLEILPSGSKVWRMAYRQENRTTSTRLTFGHYPAVGLAEARRKRADTKKQIVEGVDPAQ 90 Query: 59 KKKNDKV--EQSKARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++ +K + A TF+ VA WH ++W A+ +L+ LE ++F +G+R IAE+ Sbjct: 91 ARRVEKAISATAAANTFEAVARMWHQNKLEQWQPRTANNILRRLEQDVFPLIGKRPIAEV 150 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 K +L ++ +E G E+A R Q + I RYA+ G+ + +P + GA+ + Sbjct: 151 KAPVMLDVLRQIEKRGAAEIARRNAQVCSQIFRYAIACGIAENDPVPALRGALKPRIKGV 210 Query: 176 RPALELKRIPELLTKIDSYTGR--PLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 A+ + +PE L ++ R P+TR ++L +L F+R+SEL WSE+D + W Sbjct: 211 HAAILVAELPEFLETLNHNKARMFPVTRILMQLMMLTFVRTSELTETPWSEVDLKNEQWV 270 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP +R + K + R + H V L Q A L++++ + G + +F D KP+ Sbjct: 271 IPWQRMKMGKRKINPR----KVDHHVFLPKQGWAFLRELRTYTGGNQWLFPNQRDPKKPI 326 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S + +AL+ +GY K GHGFR++A L G +ERQ++H + + A+Y Sbjct: 327 SNGAILAALKRLGYAGK--HTGHGFRSLAKGILKTLGN-DISNIERQLAHSSGEAYGASY 383 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERF 381 + LEER++M+Q +AD++D + Sbjct: 384 -DRESFLEERKIMMQGYADYIDAVSRKI 410 >UniRef50_Q0C1T8 Site-specific recombinase, phage integrase family n=2 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C1T8_HYPNA Length = 409 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 136/375 (36%), Positives = 203/375 (54%), Gaps = 18/375 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + V PNGSK WR Y+++GKQK++ALG YPEI+LA AR +R EAR LL G+DP + Sbjct: 40 LFIEVRPNGSKLWRFAYKFDGKQKLMALGTYPEISLARAREKRAEARALLIEGIDPMQQA 99 Query: 61 KNDKVEQSK--ARTFKEVAIEWHGTNKKWS-EDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K+E+ TF +A E N++ L A LG+ + ++K Sbjct: 100 KVNKLERQALTEHTFSAIAAELLDKNRREGLAGATLSKKSWLVGIANADLGDLPVTQIKP 159 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +L P++ VE G E A RL+ + + RYAV + +++P + GA+ + HRP Sbjct: 160 THVLVPLRKVESEGNYETARRLRAVISQVFRYAVATARAEHDPTAGLRGALIAPKVTHRP 219 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ + ++ L+ I +Y G T+ ++L L++ R ELR + W E D WTIP Sbjct: 220 AIVDREKFAGLIRSIWAYDGAIETKAGLQLMALLYPRPGELRLSTWGEFDLRKRTWTIPA 279 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 R +KMR H PLS A+ ILK++ G + + KP+SEN Sbjct: 280 AR------------TKMRREHKKPLSGAAVEILKRLHAVTGHEPYVLVSQLSRGKPISEN 327 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+N +LR +GY K E+ HGFR A S L ESG W DA+E +++HM + +R AY H+ Sbjct: 328 TLNGSLRRLGY-AKEEMTSHGFRASASSLLNESGKWHPDAIEAELAHMGADQIRKAY-HR 385 Query: 357 AEHLEERRLMLQWWA 371 A + ++R M WWA Sbjct: 386 ATYWDQRVEMADWWA 400 >UniRef50_D2LIX3 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LIX3_RHOVA Length = 392 Score = 335 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 137/384 (35%), Positives = 209/384 (54%), Gaps = 21/384 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV PNGSK WRL YR+ GK K LA+G YP+I L+ AR +R EAR+LLA GVDP +K Sbjct: 26 LYLLVRPNGSKLWRLNYRHLGKNKTLAIGKYPDIALSTARDKRAEARRLLAEGVDPSYRK 85 Query: 61 KND--KVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + + K + + A TF+ VA E+ + + SE L ++ LG R IAEL+ Sbjct: 86 QVEVAKAKVAAANTFEAVAEEYLASLARDRSEGTVRANSHILRKKVYPLLGRRPIAELRP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++L ++++E G++++A R + + + A S +P + G + S Q+R Sbjct: 146 HEILEALQSIEDRGQVDMAHRARTLIGKVFQLAALSDRAPTDPTVVLRGRLKSWRVQNRA 205 Query: 178 -ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 + LL +ID+Y G P R A+ F+R+ ELRFA WSEID E +W IP Sbjct: 206 SVTSEQTFAPLLRRIDTYEGSPNVRAAMLFLAHTFVRTVELRFATWSEIDLEDGVWRIPE 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER KM H VPL+ AIL+ + +F D IF+ H + + Sbjct: 266 ER------------MKMGRPHDVPLTASTRAILRDMAKFR-RGDYIFVSAHVGKSVLGDG 312 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+ A++ +GY + HGFR+ A S L E G + D +E Q++H+ +N+VR AY ++ Sbjct: 313 TLRKAMKSIGYQG--RMTPHGFRSSASSILNERG-YRSDVIEMQLAHVEKNAVRRAY-NR 368 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 + ER M+Q W++ +D R+R Sbjct: 369 TLYWNERVSMMQDWSNLVDGWRKR 392 >UniRef50_C8NCE3 Phage integrase family site-specific recombinase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCE3_9GAMM Length = 401 Score = 333 bits (855), Expect = 6e-90, Method: Composition-based stats. Identities = 125/390 (32%), Positives = 198/390 (50%), Gaps = 25/390 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V +G KYWRL YR G KQ+ ++ GVYP+++L AR RRDE + L+A G+DP Sbjct: 27 LCLQVTSDGKKYWRLYYRMPGSKKQQTVSFGVYPKVSLKQARQRRDEVKLLIARGIDPKL 86 Query: 59 KKKNDKVEQSKA--RTFKEVAIEWHGTN---KKWSEDHAHRVLKSLEDNLFAALGERNIA 113 K + +++ A TF +VA W KKW + H LE ++ +G+ + Sbjct: 87 AAKQLRQDRTVALENTFADVAKRWLEHRAEVKKWGKQHQRATRSMLERYMYPRIGDYPVT 146 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQS-GLIDYNPAQEMAGAVASCN 172 E++ +L ++ ++ +G++E + +L TT + RYA+ + + YNPA +++ + + Sbjct: 147 EIEPTQILRVLQELQAAGKIETSHKLLSATTQVFRYAMITIRICKYNPAADLSELLVTGK 206 Query: 173 RQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 + + I LL +D YTG P R L LIF R +E+R RW EIDFE + Sbjct: 207 SVPFRHITDPGEIGRLLVALDEYTGSPQARGLARLHPLIFTRPTEIRLMRWDEIDFEQRL 266 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W + + + + VP S QA I+ ++ G D +F H +K Sbjct: 267 WR-----------RSDDETVRRKNVNAVPFSRQAWEIIAGLRLVTGRTDYVFCNIH-RNK 314 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 P S L+ +GY K + HG+R A + L + VE+Q+ H +N VR Sbjct: 315 PFSAGAEGKVLKSIGYHEK--IVPHGWRHTASTLLHNQ-DYDSIWVEKQLGHTDKNEVRG 371 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRERF 381 Y H A++LE+RR MLQ WAD+LD+ + Sbjct: 372 TYNH-ADYLEQRRKMLQEWADYLDMLKANV 400 >UniRef50_Q5R097 Integrase n=2 Tax=Idiomarina RepID=Q5R097_IDILO Length = 436 Score = 333 bits (855), Expect = 6e-90, Method: Composition-based stats. Identities = 153/417 (36%), Positives = 223/417 (53%), Gaps = 54/417 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV G KYWRL+YR+ KQK LALGV+P +TL A+ +A+ +LA+GVDPGD Sbjct: 34 LRLLVRKQGGKYWRLKYRFNKKQKTLALGVFPNVTLKQAKDATIKAKAMLADGVDPGD-- 91 Query: 61 KNDKVEQSKARTFKEVAIEWHGTN-----KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K + + + A +W + WSEDH RV K LE+ + LG++ I ++ Sbjct: 92 --TKSTNTNDNSLRFYAAKWLEYQSQATARVWSEDHKARVWKRLENGILKKLGDKLITDV 149 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA--SCNR 173 + D+ I+ VE G E A R+ T + Y V ++ + + V S Sbjct: 150 RKEDVRRLIENVEAKGHHETAKRIADDTQRLFEYVVDQYSLEDDVDIRLLRPVKVISKPV 209 Query: 174 QHRPALELKRIPELLTKIDSY--TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 HR AL++K +P + + +Y TGR LT AIEL +L F+RS ELR ARW E D + + Sbjct: 210 VHREALDIKNLPFFMQDLANYTQTGRELTALAIELLILTFVRSGELRGARWEEFDLDNKV 269 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W+IP ER KM+ H VPLS +AL ++K+IK+ G ++L+F + + Sbjct: 270 WSIPAER------------MKMKRPHEVPLSAKALDVIKRIKRITGHYELLFPSETKPDE 317 Query: 292 PMSENTVNSALRVMGYDTKVEVC----------------------------GHGFRTMAC 323 PMS+NT+ A+ MGY K + HGFRTMA Sbjct: 318 PMSDNTMRQAMFKMGYFPKAKDTKDGKIAKTYLKYQDNAHYPDGRLKEKAVPHGFRTMAS 377 Query: 324 SSLVESG-LWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 S+L ES + DA+ERQ++H+ +N V+ AY HKAE+ +ER M++WW DF++ RE Sbjct: 378 STLHESDQKFRSDAIERQLAHVEQNKVKDAYSHKAEYWDERVEMMEWWGDFVNEQRE 434 >UniRef50_Q3JXH9 Integrase or site-specific recombinase n=24 Tax=cellular organisms RepID=Q3JXH9_BURP1 Length = 414 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 108/382 (28%), Positives = 187/382 (48%), Gaps = 18/382 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQK-MLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 + L V +GSK+WR +Y GKQ+ ++ +G YP ++L AR R +++A GV P Sbjct: 36 LVLEVMTSGSKFWRYRYSLHGKQQPVVTIGEYPAVSLTAARERARRYAEIVAGGVSPVAD 95 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + D+ T E A W S ++ ++LE +++ A+G ++++++ Sbjct: 96 ARKDRGAVKSLDTIHEFAEYWIEQQMMGKSAEYLRTTRRALEKDIYPAIGGKSVSDVTPG 155 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 D+LA ++ G ++A + I YA+ L+ NPAQ + + Sbjct: 156 DVLAICDRIKKRGAPKMALSTRNILKRIYEYAIARQLVTSNPAQAIVARFVATQASRDRV 215 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L I +L + + + R + AI L +L +R SEL ARW E D +ASIW IP ER Sbjct: 216 LSPNEIGRVLRAVYASSIRRPLKLAIHLLVLTMVRKSELIEARWDEFDLDASIWRIPAER 275 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K H V L+ QA+A+L+++ +H +F + +P++++T+ Sbjct: 276 ------------MKKDREHWVYLAPQAVAMLRELHATRTSHQYVFPSSRGADRPIAKSTL 323 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 N A+R + D H FR A + L E G DA+E+ ++H + ++ Y ++AE Sbjct: 324 NQAVRALDMD-VQHFVLHDFRRTASTHLHEMGQ-PSDAIEKALAHSIKG-IKGVY-NRAE 379 Query: 359 HLEERRLMLQWWADFLDVNRER 380 + +ERR + WADF+D + Sbjct: 380 YADERRRITALWADFVDAQIDE 401 >UniRef50_C6ALW6 Prophage integrase n=2 Tax=Pasteurellaceae RepID=C6ALW6_AGGAN Length = 413 Score = 333 bits (854), Expect = 7e-90, Method: Composition-based stats. Identities = 112/392 (28%), Positives = 183/392 (46%), Gaps = 27/392 (6%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L ++P G+K WR +Y + +G +P ITLA ARV+RDE LLA G+DP + Sbjct: 32 LFLEIYPTGAKKWRFRYERPITKARTKFNIGDHPSITLAQARVKRDEYNALLAQGIDPQE 91 Query: 59 KKKNDKVEQS--KARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K TF + A W KK D + + +E L +LG+ I ++ Sbjct: 92 HAKQKHQALQFQLENTFLKWAERWKENKEKKVKADTLRKDWRRIEMYLLESLGQIPIDKV 151 Query: 116 KTRDLLAPIKAVEM-------SGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV 168 L+ + +E + + R+ + I+ YA+ +G I +NP + Sbjct: 152 LPPLLIQALTPLEAMKDRRTGTADSDTLKRVIRLANEILTYAMNAGAIPFNPCLSVKDIY 211 Query: 169 ASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 + + P +E + +P LLT I +P T+ I LL +R SE A W+E D E Sbjct: 212 SFAPAESHPHIEPEELPLLLTDISESKAQPRTKDLILFQLLTMVRPSEASNAEWAEFDLE 271 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD 288 +WTIP E+ KM+ H VPLS+Q + +L+ ++ G +F + Sbjct: 272 NKVWTIPAEK------------MKMKHPHKVPLSSQTIRLLQHLQSQTGHKRFVFASRNK 319 Query: 289 SHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 ++PM+ +VN AL MGY K + HG R++ + + E + + +E ++H S Sbjct: 320 INEPMNSQSVNKALVDMGYKGKQD--AHGLRSIGRTYIGEKQMDGYEVLEMCIAHKVGTS 377 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 Y KA+ E+R ++Q W DF++ ER Sbjct: 378 TGKIY-DKADFFEQRIPIMQAWGDFVEQCAER 408 >UniRef50_A9VZC1 Integrase family protein n=3 Tax=Alphaproteobacteria RepID=A9VZC1_METEP Length = 412 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 111/385 (28%), Positives = 186/385 (48%), Gaps = 27/385 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V P+GSK W L+ +G+++ + LG +TLA+AR + RKL +G DP ++ Sbjct: 42 LYLVVEPSGSKRWLLRTIVQGRRRDIGLGGAGLVTLAEAREKALAYRKLARDGGDPLAER 101 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + + TF E A + H +K + HA + + +L LG R + +++T Sbjct: 102 RKAR---ATVPTFAEAAEQVHEEHKASWKNPKHAAQWITTLRTYANPHLGARRVDQIETP 158 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQEMAGAVASC--NRQH 175 D+L + + ++ + E A R++QR ++ +A +G NP + +A + +H Sbjct: 159 DVLRALSPIWLT-KGETARRVRQRIGTVLDWAKAAGHRTGDNPVESVAKGLPKQGERDEH 217 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 AL +P +T++ S R A E +L R+SE+ A W EID ++WT+P Sbjct: 218 HAALPYAEVPAFVTRLQSSDHGEAARLAFEFLILTAARTSEVLRAEWREIDEAEALWTVP 277 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R K H VPLS ++L I+++ K G IF G + KPMS Sbjct: 278 AAR------------MKAGREHRVPLSKRSLEIVRRAKLLAGDSAFIFPG-RSTGKPMSN 324 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 ALR M K+ V HGFR+ E+ R+ E ++H N V AAY Sbjct: 325 MVFLMALRRM----KLTVTAHGFRSSFRDWAAEATSLPREVAEMALAHTIENRVEAAY-R 379 Query: 356 KAEHLEERRLMLQWWADFLDVNRER 380 + + L +RR M++ W+ F+ + Sbjct: 380 RGDLLAKRREMMEQWSTFVASKPKG 404 >UniRef50_B8L9U1 Phage integrase family protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L9U1_9GAMM Length = 399 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 125/396 (31%), Positives = 198/396 (50%), Gaps = 25/396 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + PNGSK WR YR + KQ++LA+G +++LADAR +A+ + G DP ++ Sbjct: 26 LFLEIRPNGSKLWRYAYRLDSKQRLLAIGSLQDVSLADARAAMRQAKSQVKLGQDPVLQR 85 Query: 61 K--NDKVEQSKARTFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K + E+S T E A +W+ K WS H R + L+ + +G+ I E+ Sbjct: 86 KIAKARSEESALNTVAENAEDWYSGAEKSWSASHRDRARRYLDQRILPDIGKWPIREVTP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 D+L ++ E +G VA +Q +++ +A+ + D +P + A+ H Sbjct: 146 ADVLKLLRKAEKAG-PHVAIVTRQTLSSVFEHAIVNLRADADPTHPVRRAIKKPPVMHAV 204 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 A + +LL +D+Y G +T AIEL L F+R+ ELR A+W+ ID+EA Sbjct: 205 AHSAATMGKLLAGLDTYPGNRVTAIAIELLALTFVRTKELRTAKWANIDWEAE------- 257 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 P +K K R H VPL+ +A+A+L+++++ GA +F D KPMS Sbjct: 258 ---SPLLKIDAGEMKKRRKHWVPLAPRAVALLRELQEITGAGTYLFPNQRDPKKPMSREA 314 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 VN L+ Y E+ GH FR A + L E+G + V+ Q++H N AAY H A Sbjct: 315 VNMGLK---YLGMDEISGHDFRATASTWLHEAG-YPSAVVDMQLAHAKTNKTGAAYNH-A 369 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFEYAKINNP 393 E L +R M+ WAD L ++ ++ P Sbjct: 370 EFLPDRIKMMDRWADHLAKQKQ------RQSRQPKP 399 >UniRef50_D0J426 Phage integrase n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0J426_COMTE Length = 416 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 126/388 (32%), Positives = 205/388 (52%), Gaps = 13/388 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P GS+ W +YR +GK+ LALG YPE++L AR RD AR + G+DP + Sbjct: 27 LYLEVSPAGSRRWFWKYRKDGKEGRLALGRYPEVSLTAARKARDAARLQKSEGIDPAKAR 86 Query: 61 KNDKVEQSK--ARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K +K+ A TFK VA+EW+ +WS HA R+ + LE +LF +GER +A+++ Sbjct: 87 KLEKLVNPTGVADTFKAVALEWYEKQVPRWSPGHAERMHRQLERDLFPWIGEREMAQIQP 146 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQS-GLIDYNPAQEMAGAVASCNRQHR 176 +LLA ++ VE G +E A R + RY + + + + + + + Sbjct: 147 MELLAVLQKVEARGAVETADRALMLARQVWRYWLPTASNTQRDITEGLKARLTPYRGTNF 206 Query: 177 PAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 PA+ E +R ELL + +Y G P R A+ L L++ R LR W+E+D +A++W IP Sbjct: 207 PAIVEPQRFGELLRAMYAYKGGPFVRTALLLAPLLYQRPGNLRMMEWAELDLDAALWKIP 266 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 + + H+VPL QA+A+L+++ G +F G D +PMS+ Sbjct: 267 SAKMKRSVQEKE-----NGEPHVVPLPKQAVAMLRELLPLSGRGRYVFPGQRDHDRPMSD 321 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 N+V +AL +G + HGFR A + LV+ A+E ++H +++ +Y + Sbjct: 322 NSVRTALYSLGVGEEQSW--HGFRASARTMLVDQLDLDPLAIEANLAHAVKDANGRSY-N 378 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFIS 383 + ++L +R +Q WAD+LD RE Sbjct: 379 RTKYLAKRFDQVQQWADYLDRLREGAAV 406 >UniRef50_B2UB26 Integrase family protein n=2 Tax=Ralstonia RepID=B2UB26_RALPJ Length = 415 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 111/398 (27%), Positives = 180/398 (45%), Gaps = 29/398 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + +LVHP GSK WR QY GK++ + +G YPEI ++DAR R E R ++ G DP + + Sbjct: 31 LFVLVHPGGSKAWRYQYMLSGKRRSVLIGSYPEIGVSDARDRHAEYRAMVEQGTDPAEHR 90 Query: 61 KNDKVEQSKART-------FKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNI 112 + DK E+ + FK +++W +E + ++ LE ++ +G + + Sbjct: 91 RQDKAERKAKESLQEDEGLFKAFSLKWIDERLATKTEGYRSQIKSRLERFVWPVIGRKAL 150 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN 172 ++K LL I+A A ++ I YA+Q L++ NPA + G + Sbjct: 151 EDVKPSHLLEIIEA--RRATPNTAEGVRVIIQQIYNYAIQKLLVESNPAVPLRGVITVPK 208 Query: 173 RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 +H L + + P T A L + R SE+ A+W+E D + + W Sbjct: 209 AEHHRHLSESELGAFWRALGRQGAHPATTAAARLLVYSMCRKSEVLRAKWAEFDLDKAQW 268 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 IP ER K R H V LS QA+ +L+ ++ G + + P Sbjct: 269 DIPAER------------MKSRRPHRVYLSRQAIELLEIMRAISGDGVYVLPSVKIASVP 316 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 ++E T+N + + + E HG R A + L E G +SRD VE ++H R+ A+ Sbjct: 317 LAEATLNHLFKRLDF-GVPEFSPHGTRGTAATLLREHG-FSRDVVELLLAHTERSQTAAS 374 Query: 353 YIHKAEHLEERRLMLQWWADFLDVN----RERFISPFE 386 Y H E ERR LQ+ AD +D + + Sbjct: 375 YHH-HELEAERRKALQYLADEIDRQAAISAAGNVVSLK 411 >UniRef50_Q3SF40 Putative phage integrase n=5 Tax=Proteobacteria RepID=Q3SF40_THIDA Length = 440 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 112/426 (26%), Positives = 195/426 (45%), Gaps = 54/426 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYE-GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 +++ + P G + W L+YR GKQ+ + LG YP +LADAR RD+ + L G+ P Sbjct: 26 LYIEIMPTGKRRWGLKYRIPTGKQETIRLGDYPAYSLADARTWRDDCKALAGRGLSPMAL 85 Query: 60 KKNDKVEQSKAR--------------------------------TFKEVAIEWHGTNKKW 87 K+ D + + A T + A W+ + Sbjct: 86 KRGDPIPEDAAPAAKELAQFFIRNWCMKAVEKAKAKEAEAKAADTVEAFAWRWYAEIVEP 145 Query: 88 SEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIM 147 + + + + L+ + A+G + IA++ D+LA ++ G ++A + + + Sbjct: 146 ANSNPRNIKRILDKDAIPAIGSKQIADVTVTDILAITDKIKNRGADQMALQTRNVLKRLF 205 Query: 148 RYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELT 207 YA+ +NPA + + + AL + I LL I + + + A+ L Sbjct: 206 AYAIAREKTTFNPAAAIEAKFIAQAKSRDVALSPEEIGRLLRAIYQSSMKRAHKLALHLL 265 Query: 208 LLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALA 267 +L +R SEL A+W E+D E + W IP ER K HLVPLS QA+A Sbjct: 266 ILCMVRKSELTEAKWEELDLEKAEWAIPGER------------MKKDKPHLVPLSRQAVA 313 Query: 268 ILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLV 327 + +++K + +F KP++ N +N+ +R + + H FR A + L Sbjct: 314 MFEELKGLASGSEWVFPSRSSLKKPIAHNALNTVVRAL-EADVRDFVIHDFRRTASTHLH 372 Query: 328 ESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER-----FI 382 E+G ++ D +E+ ++H + +R Y ++A++ ++RR MLQWWADF+D + I Sbjct: 373 EAG-FNSDWIEKALAHETKG-IRGVY-NRAQYADQRRDMLQWWADFVDSQIQDGRGKVII 429 Query: 383 SPFEYA 388 PF A Sbjct: 430 GPFGKA 435 >UniRef50_UPI0000E0FEDC DNA integration/recombination/inversion protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0FEDC Length = 418 Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats. Identities = 113/401 (28%), Positives = 193/401 (48%), Gaps = 29/401 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LL+ P+G K W+ +R + +G YP+I+L AR +AR+L+A G++P K Sbjct: 26 LFLLIKPSGYKSWKYDFRINSTRGSYTIGKYPDISLKQARQEHLQARELVAQGINPKQIK 85 Query: 61 KNDKV-EQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 KV ++ + + F +W +E + + ++ NL L ++NI E T D Sbjct: 86 TQRKVNDELQTKRFSYYMNQWLNKQV-LAESTFKDLKQRIDKNLIPFLDKKNINEYTTAD 144 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ----H 175 LL + ++ G E A RL + + G+I+ NPAQ +A + +++ Sbjct: 145 LLKIMLSISDRGAKETAIRLANVARRVFNEVLILGIIETNPAQGLAELLPKPDKRIDNNF 204 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRW--AIELTLLIFIRSSELRFARWSEIDFEASIWT 233 + + LL +ID+ + R A++L L+F+R +RF +W I+F+ +I Sbjct: 205 GHITSTEELKILLNQIDAPSARQDFAVTQALKLMPLVFLRPYNIRFLKWEYINFDENIIK 264 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 +P K VPL+TQA+ ILKQ++Q G +F+ P+ Sbjct: 265 LPAT------------ELKNNKPLDVPLATQAVTILKQMQQVTGHKTYVFVTAQGKDTPL 312 Query: 294 SENTVNSALRVM------GYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 SENT +AL+ + + HGFR A + L E G + D +E Q++H ++ Sbjct: 313 SENTTTNALKRIINPTTNKPYGTGYMTSHGFRHTASTMLNELG-YEADIIELQLAHTNKD 371 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLDVNRER-FISPFEY 387 +RA Y +KA+ + +R M+Q WAD+LD + I P + Sbjct: 372 RIRATY-NKAKWMNKRIAMMQDWADYLDGIKAGTNIVPIKK 411 >UniRef50_B5JZM6 Site-specfic recombinase, phage integrase family n=2 Tax=Rhodobacteraceae RepID=B5JZM6_9RHOB Length = 411 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 109/389 (28%), Positives = 187/389 (48%), Gaps = 28/389 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V +G+K W + GK+ + LG ++LA+AR E RKL G DP K Sbjct: 45 LFLKVVTSGAKRWVQRIVVRGKRTEIGLGSASLVSLAEARETALENRKLARAGGDPLQAK 104 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + TF+E + + H ++ ++ HA + L +LE F + ++E+ T Sbjct: 105 RT----SEALLTFEEASRKVHKIHEPTWRNKKHAAQFLSTLETYTFPRMSNLKVSEVTTA 160 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN--RQHR 176 D+LA ++ + + + E A R++QR +M++AV +G NPA ++ A+ +HR Sbjct: 161 DVLAVLQPIWLE-KPETAKRVRQRIGTVMKWAVANGWRQDNPAGAISQALPKQKQPVKHR 219 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 +L + L + S T+ A+ELT+L RS E+R A WSEID + WTIP Sbjct: 220 KSLPYDEVSGCLVAVRSSRAFNATKLALELTVLTACRSGEVRLAEWSEIDLAKAEWTIPA 279 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +R K H +PLS +A+ +L+ K L+F + P+S+ Sbjct: 280 QR------------MKASKEHRIPLSGRAVEVLEAAKALDDGTGLVFPSTTGN--PLSDM 325 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T++ ++ +GYD HGFRT + E +R+ E ++H +N AAY + Sbjct: 326 TLSKLVKGLGYDVD----VHGFRTSFKTWCQERTTTAREVSEAALAHSIQNKAEAAYA-R 380 Query: 357 AEHLEERRLMLQWWADFLDVNRERFISPF 385 ++ E+RR +++ W+ F+ + Sbjct: 381 SDLFEKRRKLMEQWSCFVAEPSSAVLVRI 409 >UniRef50_A5I9N5 Integrase, phage related n=12 Tax=Legionella RepID=A5I9N5_LEGPC Length = 407 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 97/385 (25%), Positives = 169/385 (43%), Gaps = 22/385 (5%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 + + PN K W +Y+ G LG YP ++L++A+ R E ++ GVDP + Sbjct: 29 IRITPNNVKTWIYRYKINGVTTKFTLGHYPAMSLSNAKRRFLELSQMRREGVDPKTVIQA 88 Query: 63 DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLA 122 E+ T ++A+ W+ + + + +++++ LG++ + +++T+D+ Sbjct: 89 Q--EEQDNNTVDKLALNWYTNYIEKHVKRPLVIKRQIDNDIIPLLGKKKLDDVQTKDISD 146 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA-GAVASCNRQHRPALEL 181 + + G +A R + YAV G +NPA + + + L L Sbjct: 147 ALDTIVKRGARILANRTLSSIKQMFNYAVSRGYTQFNPASNIRSRDIGGIEKPKERVLTL 206 Query: 182 KRIPELLTKIDS--YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 + I L +DS TR AI+L LL +R+ ELR A W EIDFEAS+WTIP Sbjct: 207 EEIKALWLFLDSDLTQMSTQTRIAIKLLLLTGVRTVELRLASWHEIDFEASLWTIPALH- 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 SK H V LS A ++ Q+K D + G D P++EN + Sbjct: 266 -----------SKASIIHKVHLSKLAKSLFLQLKPLS-HSDYVLTGV-DGFHPITENALP 312 Query: 300 SALRVMGYD-TKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 A++ + + H R + L E+ +E+ + H + A Y ++ E Sbjct: 313 RAIKRIQEKLGIPDWTAHDLRRTFATQLGETLQIDPVVIEKCLGHKMP-RIMATY-NRNE 370 Query: 359 HLEERRLMLQWWADFLDVNRERFIS 383 L +RR L+ WA ++ + + Sbjct: 371 MLPQRREALERWAVCIENMMQDNVV 395 >UniRef50_Q1NGR6 Putative phage integrase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGR6_9SPHN Length = 428 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 125/408 (30%), Positives = 209/408 (51%), Gaps = 31/408 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V PNG + W YR+ KQK + G YP +++ ARV R+E + L+ G DP + K Sbjct: 25 LNICVLPNGRREWCFSYRFHHKQKSITGGDYPLMSIDRARVWREEMKAALSAGKDPANIK 84 Query: 61 KNDKVE-QSKARTFKEVAIEWH-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + K E Q++ TF+++A EW WS+ +A + + LE ++F +G+ ++ + R Sbjct: 85 RQLKYEDQAERTTFRQLAYEWMVAKRPGWSDRYAGVIERRLEADIFPTIGKLSVRSILPR 144 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC-NRQHRP 177 D+L +K +E G E+A R++ + I R+ + G + +P +++ + HR Sbjct: 145 DMLGALKCIEDRGATEMAHRVRAYCSEIFRFGIPDGRVLTDPCRDLGTVMRKRAAVTHRS 204 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS---IWTI 234 + +K +P +++ TG L+ A+ T+L +R++E R A+WSE + +W I Sbjct: 205 KIPIKELPHFYAALNADTGSRLSHLALRWTILTMVRTTETRHAQWSEFEGLGGPEPLWRI 264 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD--------LIFIGD 286 P ER KMR HLVPL QA+A+L++IK+ +F Sbjct: 265 PAER------------MKMRVEHLVPLPPQAVALLREIKELNVYGKYGNERFGQYLFPVI 312 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 + +S N + L+ +G K HGFR++A + L E+GL+ D +E Q++H+ Sbjct: 313 GNQGDTISSNRMLVLLQRLGVGDKA--TVHGFRSIASTVLNETGLFKPDWIELQLAHV-P 369 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNR-ERFISPFEYAKINNP 393 VRA Y + A +L RR ML+WWAD+LD E A P Sbjct: 370 GGVRAVY-NAARYLSHRRQMLEWWADYLDKAEQASAAIAIEKATPAKP 416 >UniRef50_A7JSX8 Bacteriophage integrase n=3 Tax=Pasteurellaceae RepID=A7JSX8_PASHA Length = 413 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 109/388 (28%), Positives = 177/388 (45%), Gaps = 25/388 (6%) Query: 1 MHLLVHP--NGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDP 56 ++L V P GSK W Y + L +G YP ITLA+AR D R L+ G+DP Sbjct: 31 LNLRVKPLPKGSKIWIFNYTNPQTKNRTNLTIGRYPLITLAEARTICDGYRSLIEKGIDP 90 Query: 57 GDKKK--NDKVEQSKARTFKEVAIEWHG---TNKKWSEDHAHRVLKSLEDNLFAALGERN 111 ++KK + E TF+ VA + K + + LE+++F +G+++ Sbjct: 91 QEEKKRLQQEAENRVNDTFRNVAESYFNGIYKEKAKNPITREKNWIRLENHIFPYIGDKH 150 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC 171 + E+K + L+ V +L Q +A+M +A+ G+I+ + + Sbjct: 151 VEEIKVKALVDIYSKVADKSN--TLKKLHQLVSAVMDHAITQGIIESHNCRLAVKNFYIK 208 Query: 172 NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 P +EL+ +P+L T + + T + + L +R +E A W EIDFE + Sbjct: 209 PSTPNPTIELEELPQLFTDLHNAKLSKQTYALVCWSFLTALRPNEAVNAEWKEIDFEKKL 268 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W IP E+ K + H VPLS+QAL IL+ +K + +F G + K Sbjct: 269 WNIPKEKMKGKADK--------KRPHSVPLSSQALKILEMMKMHSNSSPFVFPGRSSNSK 320 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA--RNSV 349 PMS TVNS L+ GY K + HG R + L + R E +SH+ + + Sbjct: 321 PMSNATVNSTLKRNGY--KDRLTAHGIRAFVKTFLSSRKV-DRHVSESILSHLLEGGDDL 377 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVN 377 Y ++ + LEER ++Q D+ + Sbjct: 378 ENTY-NRYDFLEERVPVMQLLGDYCEQC 404 >UniRef50_A4VPC8 Site-specific recombinase, phage integrase family n=6 Tax=Proteobacteria RepID=A4VPC8_PSEU5 Length = 455 Score = 324 bits (831), Expect = 4e-87, Method: Composition-based stats. Identities = 104/384 (27%), Positives = 182/384 (47%), Gaps = 28/384 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV P G K WR +YR +GK+ + A+G +P+++LA+AR R++AR L+ G+ P ++ Sbjct: 81 LFLLVKPTGCKLWRWKYRLQGKENLFAIGSFPQVSLAEARTAREKARALVKQGIHPAHER 140 Query: 61 KNDKV---------EQSKARTFKEVAIEWHGTNKKWSE-DHAHRVLKSLEDNLFAALGER 110 + K ++++ +F +VA + K + L Sbjct: 141 QQVKQRNLEALAERKRARESSFAKVAQAYLTEIKPVFAYSSYRTKESRIRKYLSPKFDGM 200 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 ++++ + + ++ + G A ++ +AI +AV GL++ NP + G + + Sbjct: 201 PMSDIGVKQIRPLLEECKTHGAWA-AIHVKGDLSAIFEFAVVRGLVEANPIPSLRGLLRA 259 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 + + A+ ++I + + Y G P T + L L R E A W E DFE + Sbjct: 260 PASESKAAMTREQIQKFYQALRGYRGYPETALCLRLIALTACRPGEAADAEWEEFDFEDA 319 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +W P + K R H+ PLSTQA+A+LK +++ G +F Sbjct: 320 VWRRPAAK------------MKARRDHISPLSTQAIAVLKGLQRITGGGRYLFPH-RSGK 366 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 + N + A+R M H +RT + E+G + DA+ERQ++H+ N VR Sbjct: 367 GFTTPNRLTYAMRDMNLGRGT--TPHCWRTTFSTWANENG-FRPDAIERQLAHVESNKVR 423 Query: 351 AAYIHKAEHLEERRLMLQWWADFL 374 A Y +KA L++RR +LQ WA +L Sbjct: 424 ATY-NKALLLDQRRSLLQAWAGYL 446 >UniRef50_C6QCE7 Integrase family protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QCE7_9RHIZ Length = 418 Score = 323 bits (829), Expect = 7e-87, Method: Composition-based stats. Identities = 104/402 (25%), Positives = 190/402 (47%), Gaps = 35/402 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+G++ W +Y ++ K + L LG ++LA AR +AR+ L G DP + K Sbjct: 28 LYLRVKPSGARSWVFRYMHDRKPRYLGLGSAASVSLATARSLAGDARRQLDLGQDPIEAK 87 Query: 61 KNDKVE----QSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 + + E +++A TFKE A + ++ + H + +L L+ G +A Sbjct: 88 RAAERETAADKARAMTFKECAEAYMAAHEPSWKNAKHCEQWHSTLRRYLYPKFGGIAVAL 147 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSG-LIDYNPAQE-------MAG 166 + T + I+ + S E A+R++ R ++ +A G NPA+ + Sbjct: 148 VTTEMVFEAIQPIWHS-MPETASRVRGRIEVVIDWAKARGAFSGENPARWRGHLANLLPK 206 Query: 167 AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 +H A+ +P L++++ + TG LT A+E T+L R++E A+WSE D Sbjct: 207 PSKVAKVEHHAAMPFDDLPALMSELRAATG--LTSRALEFTILTAARTTEALGAQWSEFD 264 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 E IWT+P R K H VPLST+A+ I+K+++ ++ +F G+ Sbjct: 265 LEKKIWTVPAVR------------MKAGKDHRVPLSTRAVEIIKELETV-KRNEFVFPGE 311 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 + +S ++ LR + + E+ HGFR+ E+ + VE ++H Sbjct: 312 K-PGRHLSNMSMLMLLRRLK---RGELTVHGFRSTFRDWAAETTSFPNFIVEMALAHAIE 367 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYA 388 + V AY + + LE+RR ++ W + + R ++ F + Sbjct: 368 SKVEGAY-RRGDLLEKRRALMVAWMQYCAKAKMRPVADFSNS 408 >UniRef50_A7H0X5 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter curvus 525.92 RepID=A7H0X5_CAMC5 Length = 396 Score = 323 bits (828), Expect = 7e-87, Method: Composition-based stats. Identities = 110/387 (28%), Positives = 182/387 (47%), Gaps = 29/387 (7%) Query: 1 MHLLVHPNGSKYWRLQY--RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 +++ V P+G+K + ++ R G+ K ++LG YP I+L AR +R E +K LANG +P Sbjct: 27 LYIQVMPSGTKTFIYEFKSRSSGRYKRISLGQYPAISLLMAREKRLEFQKALANGDEPMS 86 Query: 59 KKKNDKVEQSKARTFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K +F+ V EW K+ S A + E G+ +I + Sbjct: 87 EAKQA------MTSFEAVFDEWFKFKQKEVSTKQAFTHKRYYERFFLPKFGKDDIKTITK 140 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG--AVASCNRQH 175 R +L ++++ + E R + + R+AV + ++++P + H Sbjct: 141 RQILEAVESLNKEAKFETLDRALSSISQLFRWAVMNEYLEHSPTYGIDKNALFKMPKVNH 200 Query: 176 RPALELKR-IPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 A+ I +L+ I +Y G A LL R +R A+WSEI+FE IW I Sbjct: 201 YAAIFDDDGIRKLVNNIKNYDGDIRVITAALFGLLSAQRPFNVRSAKWSEINFEKKIWEI 260 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E+ KM+ H+VPL +QA+ +L K++ + +F + P+S Sbjct: 261 PKEK------------MKMKEAHIVPLCSQAIKLLSSFKKYEFRSEFLFPSVKSTKIPIS 308 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVES---GLWSRDAVERQMSHMARNSVRA 351 +N+V S LR +GY ++ HGFR M + E +E + H RN V+A Sbjct: 309 DNSVRSMLRNLGYTND-DIVPHGFRAMFSTICHEHIKEHGLEERIIELCLDHAERNKVKA 367 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNR 378 AY H A++L+ER ++QWW D+L Sbjct: 368 AYNH-AKNLKERAQLMQWWGDYLARLA 393 >UniRef50_D0SJJ0 Phage integrase n=6 Tax=Acinetobacter RepID=D0SJJ0_ACIJU Length = 406 Score = 323 bits (828), Expect = 9e-87, Method: Composition-based stats. Identities = 112/388 (28%), Positives = 196/388 (50%), Gaps = 20/388 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V P G K WRL+Y K+ ++LG YP ++LA+AR +++E + LL +G++P +K Sbjct: 25 LYIEVRPTGKKVWRLKYTLHSKEGTISLGEYPSVSLAEARKKKEEIKVLLKDGINPVQEK 84 Query: 61 KNDKVEQ--SKARTFKEVAIEWH-GTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + E + + TFK +A E+ K S+D+ + +S+E +++ A+G + I E+ + Sbjct: 85 RKLHQENLIANSNTFKAIAEEYIVEGMKYKSKDYIDQFKRSMEKDIYKAIGHKPIREVTS 144 Query: 118 RDLLAPIKAVEMSGRL--------EVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA 169 D+L+ +K R A + + + +M+YA+ + + +P + A+ Sbjct: 145 ADILSILKNTITRVRKLSHYGTGEAAANQNRLFISLVMKYAIVTLRAENDPTYAVKNAIE 204 Query: 170 SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 S +H L+ L T+++ Y G R A + +R+SE+R +WS +DFE Sbjct: 205 SPETEHARPLDKDERIRLRTRLELYGGTTTVRNACLAMMYTMLRASEIRRMQWSYVDFEE 264 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 + P + R +K HLVP+S Q A+LK+ + +F + Sbjct: 265 RLIEFP----KASRRRKQERSNKKNHIHLVPMSDQLFALLKEQFEISQYQTYVFSAPFKN 320 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 + ++ T+N AL + EV H FR A + L E G + D + +Q++H+ N Sbjct: 321 DEMLARTTLNRAL---VFIGMPEVTTHDFRATASTLLNEKG-YKPDWINKQLAHVEENKT 376 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVN 377 RA Y H A++LE RR MLQ WAD +D Sbjct: 377 RATYNH-AKYLESRRKMLQDWADIVDSW 403 >UniRef50_D0D2S4 Site-specfic recombinase, phage integrase family n=1 Tax=Citreicella sp. SE45 RepID=D0D2S4_9RHOB Length = 479 Score = 323 bits (828), Expect = 9e-87, Method: Composition-based stats. Identities = 112/375 (29%), Positives = 187/375 (49%), Gaps = 27/375 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV PNGS+ W + GK++ + LG +TLA+AR RK+ G DP + Sbjct: 124 LYLLVKPNGSRSWVQRIVIRGKRREMGLGSASLVTLAEAREAALANRKVARAGGDPIQAR 183 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + TF+E A + + ++ + HA + + +LE F +G + ++ T Sbjct: 184 QEA----LAVLTFEEAARKVYEMHRPTWRNPKHASQFINTLETYAFPKIGAVKVGDVNTN 239 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ--HR 176 D+L + + + + E A R++QR +M++AV G NPA+ ++ A+ +R+ HR Sbjct: 240 DVLRVLTPIWTT-KPETARRVRQRIGMVMKWAVAKGWRQDNPAEAISQALPKHDRRKAHR 298 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ +P + + + LT+ A+E +L RS E+R A WSEID EA+IWT+P Sbjct: 299 KAMPYAEVPGFIATVKASKAGALTKLAMEFLILTAARSGEVRGASWSEIDSEAAIWTVPA 358 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +R K + H VPLS +AL IL + + DL+F G +P+S+ Sbjct: 359 DR------------MKAKREHRVPLSPRALEILSEARAISDGSDLVFPGSR-RGRPLSDM 405 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T++ R +G+ HGFRT E R+ E ++H RN AAY + Sbjct: 406 TLSKLTRELGFAVD----VHGFRTSFRMWAQEQTDAPREVAEAALAHTIRNQAEAAYA-R 460 Query: 357 AEHLEERRLMLQWWA 371 ++ E RR +++ W+ Sbjct: 461 SDLFERRRSLMERWS 475 >UniRef50_A1AE42 Integrase-like protein n=11 Tax=root RepID=A1AE42_ECOK1 Length = 418 Score = 322 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 99/402 (24%), Positives = 179/402 (44%), Gaps = 27/402 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE--ITLADARVRRDEARKLLANGVDPGD 58 +++ V +G+ +R YR G+++ L +G Y I+LA+AR A+KLL G P Sbjct: 25 LYVAVLTSGTVSFRYDYRINGRRETLVIGQYGRDGISLAEAREELIAAKKLLKAGQSPAA 84 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K++ + A TF V + + + ++ ++ ++ LG + +AE+ T Sbjct: 85 AKRDGIKKIRGAETF-AVHTDSYMKHVILADSTRAMKQAVIDRDILPVLGNKMMAEITTS 143 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 + + G A + ++ +++ R+A G +NPA ++ + + + Sbjct: 144 MVRDLCDRIVERGGRATAVQAREIISSVYRHANDRGHGLFNPAADIKPSSIAIFKPRERT 203 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L + I +D+ + A++L L+ +R E A W EIDF+ WTIP +R Sbjct: 204 LTPEEIGLFFRTLDAIGAMGTMKMALKLVLITMVRKGEFTNATWDEIDFKKWTWTIPSDR 263 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K H++ L QA IL ++ G + + G ++ KP+S + Sbjct: 264 ------------MKGSRAHVIYLPKQAQDILVGLQMCAGGSEYLVPGRYNFRKPLSNAAL 311 Query: 299 NSALRV----MGYDT--KVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 NS + + D + H R A + L E+G + D +E+ ++H + VRA Sbjct: 312 NSLIDRTVKIINEDGEHIQDFTVHDMRRTASTLLHEAG-YPSDWIEKALAH-EQKGVRAV 369 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRERF---ISPFEYAKIN 391 Y +KAE+ +R MLQ WAD +D + PF +K Sbjct: 370 Y-NKAEYARQRAYMLQQWADMIDSWINGEHTDLIPFSPSKFE 410 >UniRef50_Q5LS43 Site-specfic recombinase, phage integrase family n=4 Tax=Rhodobacterales RepID=Q5LS43_SILPO Length = 406 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 115/384 (29%), Positives = 193/384 (50%), Gaps = 27/384 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G+K W + GK+ + +G ++LA+A + RKL G DP K Sbjct: 41 LFLKVDDTGAKRWVQRIVIRGKRTEIGMGSASLVSLAEASETALQNRKLARAGGDPLQAK 100 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + TF+E A + H ++ ++ HA + + +LE F +G+ ++E+ T Sbjct: 101 RTAQA----LLTFEEAARKVHKIHEPTWRNKKHAAQFISTLETYTFPRIGKLKVSEVATA 156 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC--NRQHR 176 D+LA ++ + + + E A R++QR +M++A+ +G NPA+ ++ A+ +QHR Sbjct: 157 DVLAVLQPIWLE-KPETARRVRQRIGTVMKWAIANGWRTDNPAEAISQALPKQIDTQQHR 215 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 AL ++PE L + + T+ A+EL +L RSSE+R A WSE D E IWT P Sbjct: 216 KALPYDKVPEFLETLKASDAGDFTKLALELVVLTASRSSEVRKAEWSEFDLEQGIWTRPA 275 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 ER K + H VPLS +AL IL + ++ L+F G KP+S+ Sbjct: 276 ER------------MKSKKEHRVPLSPRALEILIEARELCTGEGLVFPGTKIG-KPLSDM 322 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T+ + +GYD HGFRT + E RD E ++H+ ++ AAY + Sbjct: 323 TLLKLTKALGYDVD----VHGFRTSFKTWAQERTNTPRDVSEAALAHVLKDKAEAAYA-R 377 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 ++ E+RR +++ WA ++ N Sbjct: 378 SDFFEKRRKLMERWASYISSNLGS 401 >UniRef50_A5EUW8 Bacteriophage P4-like integrase n=3 Tax=root RepID=A5EUW8_DICNV Length = 399 Score = 320 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 133/383 (34%), Positives = 201/383 (52%), Gaps = 20/383 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + +V PNGS WR++Y GK++ LALG YP ++L++AR R+ + GVDP + Sbjct: 25 LFAVVMPNGSILWRMRYVLAGKRRELALGKYPAVSLSEARQIVLLYREQIERGVDPHAQH 84 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 ++ ++ T E K S + L +++ + G R +AE+ + Sbjct: 85 -VERHKKQDGVTVAEAVELLLSEKAKYCSASYLESCRSRLSNHVLSRFGARALAEVSEDE 143 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYA-VQSGLIDYNPAQEMAGAVASCNRQHRPA 178 A I ++ G+ A R+Q + + +++GL NP E+ G V Q+ P Sbjct: 144 WRALINWLDNGGKNYTAIRVQDLAGELYKTVRLKTGLKIANPILEIRGTVKKKPAQNYPR 203 Query: 179 LE-LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + R ELL ID + GR A++ L+F R ELR W E+DFE ++W IP E Sbjct: 204 ITNPARFGELLHAIDYFNGRWQVYLALKFLPLVFCRQIELRRMVWQEVDFERALWCIPAE 263 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 + KMR HLVPLSTQA+AIL+Q +Q DL+F G + +P+S NT Sbjct: 264 KI------------KMRRAHLVPLSTQAIAILRQAEQLRC-SDLVFCGVRNPRQPISVNT 310 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 + SALR +G+ E+ GHGFR A + L E G W V+ Q++H R+SV +AY H A Sbjct: 311 IGSALRTLGF-GHDEMVGHGFRGTAATLLNELG-WDSHIVDFQLAHWQRSSVSSAYNH-A 367 Query: 358 EHLEERRLMLQWWADFLDVNRER 380 E+L +RR M+Q WAD+ D + + Sbjct: 368 EYLTQRREMMQAWADYCDELKAK 390 >UniRef50_A3ZAX6 Prophage CP4-like integrase n=2 Tax=Synechococcus RepID=A3ZAX6_9SYNE Length = 426 Score = 320 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 120/388 (30%), Positives = 182/388 (46%), Gaps = 27/388 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V +GSK WR YR++G ++ +G YP + LADAR + E + G+DP + Sbjct: 27 LYLWVARSGSKTWRKDYRWQGARRTFTIGPYPAVRLADARKQALELNTWIKAGIDPRTQV 86 Query: 61 KNDKVEQSKART--FKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + Q+++ + F ++A W + WS + + + L + ALG+ +I + Sbjct: 87 PTQQRNQAESSSRPFVQIAQAWFEHHSASWSPRYCRDMREKLNHFVIPALGQLDIEAISR 146 Query: 118 RDLL-APIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 D+ + + G E A R T ++ +AV L NPA + +A+ H Sbjct: 147 SDIETQLLAPILARGANEQARRCNDVTRRVIEHAVDLELRQDNPAVKARKVIAATRVTHY 206 Query: 177 PALELKRIPELLTKIDSYT----GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 + +PELL ID + + A+ L +L +R SELR ARWSE+D E W Sbjct: 207 HRISWVELPELLEVIDRFERQRLAERSSLIALRLMMLTLVRPSELREARWSEVDTEGRQW 266 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH-- 290 IP ER K R H+VPLS+QA + + G DL+F + Sbjct: 267 IIPAER------------MKTRVRHIVPLSSQARHLFDMQRPITGHTDLVFHTPNHRGSG 314 Query: 291 --KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 + MS ++ LR MG+ HGFR ++ +E R E+Q++H NS Sbjct: 315 ELRVMSNGCLSMLLRRMGFQG--RQTPHGFRGFGQTNCIEQLKIPRVVTEKQLAHADGNS 372 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDV 376 V AY AE+LEER MLQ WAD LD Sbjct: 373 VSRAY-DWAEYLEERSDMLQRWADLLDQ 399 >UniRef50_A8EWJ5 Phage integrase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWJ5_ARCB4 Length = 410 Score = 319 bits (819), Expect = 8e-86, Method: Composition-based stats. Identities = 98/392 (25%), Positives = 188/392 (47%), Gaps = 24/392 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V PN +K W+ +Y Y GK+K + YP+++L AR +RD +LL +G+DP + Sbjct: 30 LYLEVTPNNAKIWKFRYTYNGKRKKTSFQSYPKVSLKQARKKRDNYNELLFDGIDPIEYY 89 Query: 61 KNDKVEQSKART--FKEVAIEWHGTNKKWSEDHAHRVLK-SLEDNLFAALGERNIAELKT 117 K K + T FK + +W K S ++ K +E+++ +G + I ++K Sbjct: 90 KEQKELKQIEDTSSFKNIFTQWLEMEKSKSGLAQYQWKKTRIENDILPFIGNKKIKDIKI 149 Query: 118 RDLLAPIKAVEM-SGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAG--AVASCNRQ 174 +D+ + +E A++L +I YA G I+ N ++ ++S Sbjct: 150 QDVTNVL--IEKNKTAPVTASKLFGYLKSIYSYAKTKGYIEINLLSDINKTHIISSSQVI 207 Query: 175 HRPALELKR-IPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 P + K + +L+ I +Y G + A++L L + +R+ L +WS IDF+ + Sbjct: 208 SYPKITEKENLKDLVNSIYNYQGFYSVKNALKLVLHLPLRAGNLCNLQWSNIDFDNKLLI 267 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 I + + K +PL+ + + IL + K + G IF+G ++ P+ Sbjct: 268 ISRDEMKVKD--------KNFDDFRMPLTDEVINILNEQKSYTGYQKFIFLGTNNR-TPI 318 Query: 294 SENTVNSALRVMGYD---TKVEVCGHGFRTMACSS---LVESGLWSRDAVERQMSHMARN 347 + + N AL++MG+D ++ HGFR S L +S + ER + H ++ Sbjct: 319 NVESPNKALKIMGFDDEVNGRKITLHGFRGTFRSLIDTLDIDSNFSFETKERALDHHEKS 378 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 V AY HK++++ + ++ +W+D++ + Sbjct: 379 KVVRAYTHKSDYINQLIPLMNFWSDYILSLKN 410 >UniRef50_Q0EWR9 Integrative genetic element Gsu32, integrase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWR9_9PROT Length = 391 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 80/379 (21%), Positives = 144/379 (37%), Gaps = 19/379 (5%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 + V G+K + Y+ G++K L+ G YP ++L +A + +EA+ L G DP K Sbjct: 30 VRVSTTGTKTFVFIYKINGQKKRLSFGTYPAMSLNEAHLLYEEAKLELEKGNDPALIKAK 89 Query: 63 DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLA 122 + T E+ + K + + L ++ R E+ D+ A Sbjct: 90 KSQLEKNEVTIPELIKLYINQYAKVRKTSWEEDERQLNKDILPRWKNRKAIEINKSDVHA 149 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELK 182 + + G A RL + YA + G + NP E+ + L Sbjct: 150 VLDTLIERGAPIGANRLLAVLKKVFNYAKEKGYVTNNPCDEITP--PATETSRDRVLTAN 207 Query: 183 RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIP 242 I ++D T+ A++ L+ R E+ ARW++I + W IP Sbjct: 208 EIKTFWHQLDCTNMHSSTKNALKFQLITLQRRKEVALARWNDIHGD--TWVIPA------ 259 Query: 243 GVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD-HDSHKPMSENTVNSA 301 +K + H V LS A +L + K + +F K + + ++ A Sbjct: 260 ------GTAKNKKRHDVHLSQFAKKLLIEAKSYSKDSPFLFPSPCGAGSKHIRPDALSKA 313 Query: 302 LRV-MGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 ++ M + H R A + L +S + +R + ++H SV A Y K E+ Sbjct: 314 VKRNMETLMVQDFSPHDLRRTAATFLTKSKIANRLVLSLMLNHSQGKSVTAVY-DKYEYF 372 Query: 361 EERRLMLQWWADFLDVNRE 379 E++ + W L+ Sbjct: 373 TEQQKAWEAWGVKLEEIIA 391 >UniRef50_B9D1P3 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter rectus RM3267 RepID=B9D1P3_WOLRE Length = 395 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 112/386 (29%), Positives = 187/386 (48%), Gaps = 30/386 (7%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 +++ V P+G KY+ L+Y+ + K K L LG +PE +LA AR R + + + +G+D Sbjct: 31 LYIFVDPSGRKYFALEYKSPADNKIKRLNLGDFPEFSLAMAREERFKLEQKVRDGIDVKH 90 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + E ++ FK++A W + +R + LE + R+I ++ Sbjct: 91 E-----SEINEQANFKKLAQRWLEIKAASVEPNTLNRDKRLLEMYAYPFFENRSITDITV 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM--AGAVASCNRQH 175 D++ +K +E G LE+ RL I + A + N + ++ Sbjct: 146 TDVIEILKKIEAKGSLEMMKRLYSLLNQIWQSAY--YIAPNNVIASINYRFTFKKVKEKN 203 Query: 176 RPALEL-KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 L I L ID Y+G T++A++ +L +R +R A+W IDF+ + +I Sbjct: 204 YATLTKNADIKALWQSIDEYSGDIRTKYALKFAVLTALRPFNIRSAKWEYIDFDEGVISI 263 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P KMR +PLS QAL +LK+ K + +F + S + MS Sbjct: 264 PA------------GDMKMREAFTLPLSRQALELLKEYKGYNLDQIYLFGSLYGSARYMS 311 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVE---SGLWSRDAVERQMSHMARNSVRA 351 ENT+N ALR MG+ K E+ HGFR M + E + + D +E+ ++H + +RA Sbjct: 312 ENTLNVALRRMGFS-KDEIVSHGFRAMFSTVCNENIDAHGLNFDIIEKCLAHKGTDKIRA 370 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVN 377 AY ++A++L + R M+QWWAD+LD Sbjct: 371 AY-NRAQNLAQMRAMMQWWADYLDAL 395 >UniRef50_D0SVD1 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVD1_ACILW Length = 399 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 104/381 (27%), Positives = 186/381 (48%), Gaps = 21/381 (5%) Query: 1 MHLLVHPNGSKYWRLQYRY-EGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++ LV +G K W+ +Y+ EGK + LG YP+++ AR + E L+ G K Sbjct: 34 LYFLVKKSGVKNWQYRYKNSEGKWAWMGLGAYPQVSAQLARQKAREFTSALSKGESLKSK 93 Query: 60 KKN-DKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K ++ ++ ++ F+ + EW T KW E + KS+E ++ G+ N E+ Sbjct: 94 KVLLEERKELESFYFENLMREWLDTKSSKWGEATYTKAQKSIEKHIIPVFGQGNYKEITP 153 Query: 118 RDLLAPIKAVEMS-GRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 ++ + ++ + G +L +A G I+ NP + M+ + + + Sbjct: 154 KEWFDFFQGLQRTLGIHTQIEKLVSYVRGCYDWAKFKGKINSNPIEGMSKHLDAYESGNM 213 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 + + +P LL KI + R + +EL +++F R ELR A+W + DF+ ++WT P Sbjct: 214 DFVTVDELPALLKKIRNNKKRAIG-IGLELLMMLFPRPGELRMAKWEQFDFKKALWTKPA 272 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 E +K R H VPLS Q + +L +++ + +F +K +S+ Sbjct: 273 EM------------TKTRQEHQVPLSKQVITLLTELRSIQPESEFLFPSRLSVNKTISDM 320 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T N AL +GY K HGFR +A + L ++ +E ++H + V+ Y K Sbjct: 321 TFNLALNRLGYKGKQN--PHGFRHLASTILNDAFSDQEQVIEVCLAHKKKG-VKGVY-DK 376 Query: 357 AEHLEERRLMLQWWADFLDVN 377 ++HL+ERR+++QWWAD+LD Sbjct: 377 SQHLDERRVLMQWWADYLDEL 397 >UniRef50_A8EUF6 Putative phage integrase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EUF6_ARCB4 Length = 405 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 106/390 (27%), Positives = 184/390 (47%), Gaps = 31/390 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V NG+K++R + Y K+K ++ G+YP+I+L +AR R++A++ L ++P + K Sbjct: 31 LYLVVKSNGTKFFRFDFSYTKKRKSMSFGIYPDISLKEARELREKAKEQLKQNINPIEAK 90 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 TFK + +W W L +++ A+G++ I+ ++ D Sbjct: 91 S---SNFGNISTFKYITEKWLKLMTSEWKHVTYELNENRLRMHVYPAIGDKPISSIEILD 147 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA--VASCNRQHRP 177 +L I+ ++ E+A R+ I +YAV G +N ++ A HR Sbjct: 148 ILNIIQKLQEKEYFEIAERILNVIERIYKYAVTYGYTKHNIIADIDKRTVFAKKIVIHRA 207 Query: 178 ALE-LKRIPELLTKIDS----YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 L I ELL I S Y T +A+ + + +R +R W+E++FE Sbjct: 208 TLTKENEIKELLKDIKSYGELYKADISTIYALNIAPYLALRPYNIRLLEWNEVNFEKEYL 267 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY-GAHDLIFIGDHDSHK 291 IP + K ++PLS QAL ILK IK + +F + K Sbjct: 268 DIPANK------------MKTNKDFVLPLSKQALEILKTIKPYSFDRSKYVFPSPTSNLK 315 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVES---GLWSRDAVERQMSHMARNS 348 P S+ T+N AL +GY K ++ HGFR M + E + D +E ++H N Sbjct: 316 PFSDATLNHALMKLGY--KDKITSHGFRAMFSTIAHEKIKEHGFHSDIIESCLAHAETNK 373 Query: 349 VRAAYIH--KAEHLEERRLMLQWWADFLDV 376 ++AAY K ++ +E++ ++QWW D+L+ Sbjct: 374 IKAAYNRESKMKYYDEKKGLMQWWTDWLNK 403 >UniRef50_A5G0X2 Phage integrase family protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G0X2_ACICJ Length = 410 Score = 317 bits (813), Expect = 5e-85, Method: Composition-based stats. Identities = 101/403 (25%), Positives = 188/403 (46%), Gaps = 36/403 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V +GSK W +Y G++ ++LG +++L++AR + + R L+ +G DP ++ Sbjct: 29 LYLRVRADGSKSWAFRYTMAGRKHWMSLGPLRDVSLSEAREQARQLRNLVRDGFDPLAQR 88 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELK 116 + + + ARTF VA + ++ + HA + +L +G+R ++E+ Sbjct: 89 RERQHLAAEQTARTFDAVAAAYVEAHRAEWSNPKHAQQWENTLATYASPIIGKRPVSEIS 148 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE------MAGAVA 169 D+ + + + E A+RL+ R A++ YA G NPA+ + A Sbjct: 149 LLDVRRVLDPIWAE-KPETASRLRGRVEAVLAYATVHGWRSGDNPARWPGFLDQIYAPKA 207 Query: 170 SCN-RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 +H AL+ +P + ++ ++ +E +L RS E R ARW EIDF+ Sbjct: 208 KVRAVKHHAALDYHDMPAFMAELREREA--VSARCLEFAILTATRSGEARGARWDEIDFD 265 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD-LIFIGDH 287 A++W IP R KM+ H VPL+ +A+ +L+++ D LIF G Sbjct: 266 AAVWVIPAPR------------MKMKKEHRVPLAPRAVELLREMAGRSPRRDGLIFPG-G 312 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 KPM++ + A+ V+ + HG R+ E + R+ E ++H+ ++ Sbjct: 313 APGKPMTDVALAKAVAVL----RPGFTAHGMRSSFRDWAAEMTSFPREIAEVALAHINKD 368 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLDVNRE--RFISPFEYA 388 AAY + + L +RR +++ WA++ E + A Sbjct: 369 RTEAAY-QRGDLLAKRRQLMEAWANYCAGLVEESEKVVAMRRA 410 >UniRef50_C0VMY9 Integrase n=1 Tax=Acinetobacter sp. ATCC 27244 RepID=C0VMY9_9GAMM Length = 429 Score = 316 bits (811), Expect = 7e-85, Method: Composition-based stats. Identities = 119/390 (30%), Positives = 187/390 (47%), Gaps = 29/390 (7%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++LL+ +KYWR+ YR K LA+G YP I+L AR +RDE +K+LANG+DP + Sbjct: 34 LYLLIDETEAKYWRMDYRRPVTQKYNTLAIGTYPTISLEQARSKRDEFKKMLANGIDPAE 93 Query: 59 KKKNDKVEQSK--ARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 ++ N K EQ + TF + A EW K + ++ L ++ +G+ +AEL Sbjct: 94 QRNNKKREQLQTLENTFSKFAAEWLDIRKHEGKVDH-ETIRKLNRDILPFIGKLPVAELT 152 Query: 117 TRDL-LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 T L A+ G LE A R++ +++ ++ +I YNPA ++ H Sbjct: 153 TEQLERDVTDALVERGALESARRIKSIINMVLKLPLKRRIITYNPAPDIILP-QPTKGNH 211 Query: 176 RPALELKRIPELLTKI-----DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 + K + +LL K D R T AI+L+ I+ R E+R W +DFE Sbjct: 212 NAVTDEKELADLLRKTWRLTKDFPRTRIRTELAIKLSAYIYQRPGEVRTLLWESVDFENR 271 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 + K H+VPLS QA ILK++++ +F S Sbjct: 272 CLSFAAS--------------KTNQDHIVPLSIQAYDILKELEELRTTSKYVFPSVKTSS 317 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 + MS +T+ L+ +G+ K HGFR A + L E + D VE Q++H ++ Sbjct: 318 ECMSTDTLTQVLKRLGFKGK--HTAHGFRATARTLLDEEIEYRTDIVEHQLAHKVKDPNG 375 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDVNRER 380 AY ++ + L RR M+Q WAD+LD R+ Sbjct: 376 TAY-NRTKFLRRRREMMQLWADYLDTLRQG 404 >UniRef50_A3UDD1 Symbiosis island integrase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UDD1_9RHOB Length = 406 Score = 315 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 113/384 (29%), Positives = 199/384 (51%), Gaps = 19/384 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + V P G +YWR +YR+ GK +M+ LG YP ++L AR +RD R+LL G++P ++ Sbjct: 26 LSIEVTPKGDRYWRFRYRFNGKAQMMGLGRYPSVSLKKARSKRDHYRELLDEGLNPSLER 85 Query: 61 KNDKVEQSK--ARTFKEVAIEWHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + + E ++ +F +A E+ + + + L++L L L I E+ Sbjct: 86 QTRQQELAQLEQSSFGSIATEFLRKRETEGAAPATLKKLRALLRLLLPDLAPLPIQEITA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 LL ++A E G+ VA + I RYA+ +G + +P+ + A+ + + Sbjct: 146 PQLLQVLRATESRGKHVVATEARALAGRIFRYAIATGRCEQDPSYMLREALVTPRVKGYA 205 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ E + LL +I++Y G L + + L F+R +LR A+W + D EA++W P Sbjct: 206 AIREPEAFGALLARIETYEGDTLIKNGLLLLAHTFVRPGQLRLAQWEDFDLEAALWRAPA 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +R +KM H+ PLS+Q + ++K++ + L+ P+S+ Sbjct: 266 DR------------TKMSRFHITPLSSQVVCLIKEMHRNKADDTLVMGSRVKPGHPISDM 313 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T N ALR +G V V HGFR A + L E ++ D +ERQ+ H+++N +R Y + Sbjct: 314 TFNKALRSLGVMGDVHV-AHGFRKSASTMLNEQ-EYNYDWIERQLDHVSQNRIRGIY-NA 370 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 A++L+ R M+Q W+D+LD ++ Sbjct: 371 AQYLQGRTRMMQEWSDYLDRLKDD 394 >UniRef50_B5J5X2 Site-specific recombinase, phage integrase family protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J5X2_9RHOB Length = 383 Score = 315 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 125/390 (32%), Positives = 209/390 (53%), Gaps = 29/390 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP---- 56 M L V P+G K +RL YR G Q+ +G YP +LADAR++ R L N DP Sbjct: 1 MFLEVLPSGRKVFRLAYRLAGNQRTKLIGDYPATSLADARLKASAFRLDL-NSSDPEIVE 59 Query: 57 --GDKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNL---FAALGERN 111 ++ ++ + T+KEVA + ++ + A + L+ L + ALG Sbjct: 60 VATRPRQTVTTKKRQTTTWKEVADGYLMMRQQSNP--APKTLRKLNYQIGVTVDALGNPR 117 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC 171 + E+ +D+L + + SGR+E A ++ R + I RYA GL+ ++PA A+ Sbjct: 118 VDEITAQDILDVVNPIASSGRVETAHEIRARFSQIFRYAGARGLVTHDPAAFTIDAMIKR 177 Query: 172 NRQHRP-ALELKRIPELLTKIDSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 R + + +LL I+SY P+ A+ L+ +F R++ELR RW EID+++ Sbjct: 178 RRGEFAGITDPAAVGKLLHAIESYREANPIVGAALMLSAYLFPRNTELRGMRWDEIDWDS 237 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 W +P +R KM H+VPL +QA+ +L+ ++++ +L+ D Sbjct: 238 LRWEVPGQR------------MKMNRDHIVPLPSQAIDLLRFLQKYDFGSELVLPSPRDP 285 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 + +S+ T N+ALR MG+ + V HGFRT A ++L E G W+ D +ERQ++H+ N V Sbjct: 286 KRMVSDMTFNAALRRMGFKSDRHVH-HGFRTTASTNLNEMG-WNYDWIERQLAHVPANKV 343 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 R++Y +KA++L+ R M++ +AD+LD R+ Sbjct: 344 RSSY-NKAQYLDGRTEMMRAYADWLDARRQ 372 >UniRef50_Q1QLT5 Phage integrase n=2 Tax=Alphaproteobacteria RepID=Q1QLT5_NITHX Length = 416 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 131/379 (34%), Positives = 197/379 (51%), Gaps = 13/379 (3%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HL V G K WR +YRY K+K+L +G YP+I+L DAR RD A+ L +G DPG K Sbjct: 30 LHLYVSTAGGKLWRFRYRYADKEKLLTIGPYPDISLVDARAARDAAKASLRDGRDPGVIK 89 Query: 61 KNDKVEQ--SKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K K+ S A TF+ +A EW+ NK +W E HA VL SLE +F LG +A++K Sbjct: 90 KLRKLANVTSTANTFEAIAREWYDLNKGQWVERHADDVLTSLEREVFPVLGNIPVADIKA 149 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 ++LA ++ +E E A R++QR +A+ YA+ SG D +PA + A+A + +P Sbjct: 150 PEVLAVLRGIEAR-AKETARRVRQRMSAVFVYAISSGRADADPAATVQKAMAPMVKGRQP 208 Query: 178 AL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI-DFEASIWTIP 235 A+ +L E+L K ++ P T+ A+ + L +R L WSE D E +W IP Sbjct: 209 AITDLDAAREMLGKAEAEKAHPATKLALRIIALTVVRPGTLITTPWSEWTDMEDGVWRIP 268 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R + H VPLS QAL ++ ++ G + F +H+ MSE Sbjct: 269 AARMKLRLQHKDDDA----RDHWVPLSRQALEAVEALRTLTGRGPIPFPNTRHAHRTMSE 324 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 N + L GY HG+R S + E + ++ ++H+ ++ V AY + Sbjct: 325 NAIGYLLNRAGYHH--RHVPHGWRATFSSVMNERFPADKPIIDLMLAHVPKDKVEGAY-N 381 Query: 356 KAEHLEERRLMLQWWADFL 374 +A HLE RR + Q WAD + Sbjct: 382 RALHLERRRKLAQEWADLI 400 >UniRef50_A0EVM1 Integrase n=77 Tax=cellular organisms RepID=A0EVM1_ECOLX Length = 396 Score = 314 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 116/388 (29%), Positives = 183/388 (47%), Gaps = 24/388 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE--ITLADARVRRDEARKLLANGVDPGD 58 +++ V P G+ +R Y G+Q+ + G Y ITLA+AR R +EA+K++A+G P Sbjct: 25 LYVAVTPAGTISFRYNYSINGRQETVTFGRYGVGGITLAEARERLNEAKKMVASGRSPAR 84 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 +K DK A TF A +W + +E + L + ++ + E+ Sbjct: 85 EKARDKARIKDAETFGAWAEKWLRGY-QMAESTRDMRRSVYQRELKSKFAQQKLTEITHE 143 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 DL A + G A ++ + R+A++ G NP+ + A + A Sbjct: 144 DLRALTDNIVERGAPATAVHAREIVLQVYRWAIERGQKVENPSDLVRPASIAKFEPRDRA 203 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L I + ++ P R A++L LL +R SEL A W EI+F ++WTIP ER Sbjct: 204 LTPVEIGLMYRYMERVGTTPSIRAAVKLLLLTMVRKSELTNATWKEINFSEALWTIPKER 263 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K R HLV LS QA+ I+ +K F G+ D I +DS PMS T+ Sbjct: 264 ------------MKRRNPHLVFLSRQAMDIMIALKTFAGSSDFILPSRYDSDAPMSSATL 311 Query: 299 NSAL----RVMGYDTK--VEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 N L R+ + + H R A + L E+G ++ D +E+ ++H + VRA Sbjct: 312 NRVLTLTYRLAQKEGDLLPKFGPHDLRRTASTLLHEAG-YNTDWIEKCLAH-EQKGVRAV 369 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRER 380 Y +KAE+ E+R MLQ WA+ +D + Sbjct: 370 Y-NKAEYREQRAEMLQDWANMIDEWTSK 396 >UniRef50_C3XC22 Integrase n=3 Tax=Oxalobacter formigenes RepID=C3XC22_OXAFO Length = 427 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 119/402 (29%), Positives = 207/402 (51%), Gaps = 40/402 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYE-GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L V P+GSK WRL+++ GK+ L+LG YP+++L R +R+EAR+LLA G+DP + Sbjct: 31 LYLEVLPSGSKLWRLKFQKPSGKESRLSLGAYPDVSLEQVRKKREEARRLLAQGIDPSED 90 Query: 60 KKNDKVEQSKAR---------TFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGE 109 +K K + + F+ +A+ + + K + ++D+ + +L+ E +LF A+G+ Sbjct: 91 RKEQKEAKQEQDVIRAFKDDRMFERIAMRLYASKKGRTTDDYRNTMLRQFELHLFPAIGK 150 Query: 110 RNIAELKTRDLLAPIKAVEMS----GRLEV--AARLQQRTTAIMRYA--VQSGLIDYNPA 161 +NIAE++ R+L KAV G+ A +L Q + A S NP Sbjct: 151 KNIAEIEGRELFTLFKAVSEKLNSKGKPMTYMARKLCQWAAEVYDLANVENSSFALNNPC 210 Query: 162 QEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFAR 221 + + + +H + +P+ + +++Y G LT+ AI + L +R + +R A+ Sbjct: 211 RSVIKFLPKHQTEHMARIGFTELPQFIQALEAYGGHILTKSAIWMLLYTGMRQTSIRRAQ 270 Query: 222 WSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF-YGAHD 280 WS+ D IW PE+ + H++PL QA+++LK I+ G + Sbjct: 271 WSDFDLNKGIWNRKPEKVD-------------KNIHIIPLPEQAISLLKDIQLLATGNSE 317 Query: 281 -LIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVER 339 L+F MSE + A+ MG+ + GHG R++ + L E G R E Sbjct: 318 NLVFPSVFAGQLKMSEAAIGQAIERMGFQ----MTGHGLRSVVSTGLNELGFTPRLV-EV 372 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 Q+ H +++ AAY + A+HLEER+ M+Q WA++L+ +E Sbjct: 373 QLGHKKGDAIEAAYNN-AQHLEERKKMMQRWANYLNSFKEPK 413 >UniRef50_D0SUB2 Predicted protein n=2 Tax=Acinetobacter RepID=D0SUB2_ACILW Length = 396 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 112/383 (29%), Positives = 196/383 (51%), Gaps = 30/383 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L++ G KYW ++ G++K +LG YP+++L AR E + + V Sbjct: 42 LSLIITTKGQKYWNVRVTVHGERKSESLGPYPDLSLKKARELAYELKHRYSRSV------ 95 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSL-EDNLFAALGERNIAELKTR 118 + + F+EVA +W K WS H V SL E + AL + I +++ Sbjct: 96 ----LHEDLKPYFEEVAEDWFNNQKETWSSKHISNVRASLDELYI--ALANKRINQIQAP 149 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 ++L IK +E G LE+A R R +M+YA+ G NPA ++ A+ + ++ + Sbjct: 150 EILQIIKKIEARGSLEIAKRTLSRCGMVMKYAIAHGYRYDNPAGDLVYALKNKRVKNLAS 209 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L +PE L +I +Y T AI L +L +R SEL ARW E D E W IP ER Sbjct: 210 LSASEMPEFLRRIKAYPADAQTHHAIVLIMLTGVRVSELLQARWEEFDLEGRKWDIPEER 269 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K R +H VPL+ +A L+ ++ +L+F ++ +PM ++ Sbjct: 270 ------------MKNRLSHRVPLTDMMIAELQALR-LTHNQELLFPHRLNNKEPMRSESI 316 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 + ++ GY + HGFR++ + + ES L++ DA+ERQ++H+ +N +R+AY ++A+ Sbjct: 317 LAVIKRSGYAG--RMTTHGFRSLFSTVVNESNLFNPDAIERQLAHVPQNRIRSAY-NRAQ 373 Query: 359 HLEERRLMLQWWADFLDVNRERF 381 + +ER ++QW+ + ++ ++ Sbjct: 374 YWDERVRLMQWYGEQVEGWMAQY 396 >UniRef50_B8F737 Phage integrase family site specific recombinase n=4 Tax=Pasteurellaceae RepID=B8F737_HAEPS Length = 416 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 104/396 (26%), Positives = 180/396 (45%), Gaps = 30/396 (7%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L+V +G+K + Y Y + +G YPEI+L AR +AR LLA +DP Sbjct: 28 LRLIVRKSGAKVFVFNYYKPYTKTRTNFTIGEYPEISLIQARKEHAKARALLAQNIDPVR 87 Query: 59 KKKNDKVEQSK--ARTFKEVAIEWHGTNKKW---SEDHAHRVLKSLEDNLFAALGERNIA 113 +++ DK EQ+ TF+++A++W K SE A + ++ G I+ Sbjct: 88 QRELDKQEQANRLELTFEKMAVKWFEDRKLKADFSERTAKDTWALFKRHILPHFGNYPIS 147 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 E+ + +K +E +G+LE + + +MRYA+ GLI N ++ Sbjct: 148 EITPLIAINALKPLERAGKLETIRKTIAKINEVMRYALHRGLIATNNLSDIGKEFDKPTP 207 Query: 174 QHRPALELKRIPELLTKI----DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 Q ++ + E L D +A+ L LL R SE+ A+W +ID + Sbjct: 208 QSMNTIQPDELAEFLQAFYQKRDKGRFGLNVFYAVMLVLLTGGRPSEIAKAKWEDIDEKE 267 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYG------AHDLIF 283 +W V+ ++ TH+V LS Q++ +L +++ F +F Sbjct: 268 RLW--------AYQVQKGNKNLPEGRTHIVTLSRQSIELLNKMRHFNEVVNANIQSPFVF 319 Query: 284 IGDHDSHK-PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMS 342 +S T+ A+ + + + HG R + +SL E ++ D +ER +S Sbjct: 320 ASVASKKTGHLSIETMRKAI--IKSIGEDRLTTHGIRHLFSTSLNEQ-NFNADWIERALS 376 Query: 343 HMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNR 378 H RN +R +Y +KA +LE+R MLQ WAD+++ Sbjct: 377 HKDRNRIRGSY-NKANYLEQRFDMLQHWADYVEELA 411 >UniRef50_A1WP11 Phage integrase family protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WP11_VEREI Length = 387 Score = 314 bits (804), Expect = 5e-84, Method: Composition-based stats. Identities = 115/377 (30%), Positives = 185/377 (49%), Gaps = 32/377 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G K WR Y EGKQ G +P+++L +A +GV P Sbjct: 26 LYLFVTPAGGKSWRANYLREGKQATRTYGRWPDVSL----AEARKAHAAARDGVVPATV- 80 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKW--SEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 +F+ +A W + H +V +LE +F +G+R I + Sbjct: 81 --------AVPSFETIARAWLKLKLPTLSNGKHQSQVANTLERFVFPKIGKRPIDTIHRP 132 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH-RP 177 +L+ ++AV++ GR+E A R+ R A+ YA +GLI+ +PA + + S + Sbjct: 133 ELVDVVQAVQLDGRVETAHRVAGRIAAVFDYAQDAGLIESHPASHLVRVLHSRKVKKPMA 192 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 ++ L+ I Y P+T ++L F+R ELR RWSE + ++W IP E Sbjct: 193 SIAPAEAGALMRAITDYD-EPVTGLGLQLLAHTFVRVGELRAMRWSEFKEDGAVWVIPAE 251 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R K+R H+VPLS QA AI+ Q++ + + P+SENT Sbjct: 252 R------------MKLRLPHVVPLSLQAQAIVGQLRLLNAEREFVMDSPLRPGHPLSENT 299 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 AL +GY + HGFR +A + L E ++ D +ERQ++H ++VRAAY ++A Sbjct: 300 FLFALYRLGYRG--RMTAHGFRALASTVLNEQSGFAHDVIERQLAHKETDAVRAAY-NRA 356 Query: 358 EHLEERRLMLQWWADFL 374 ++L +RR ++QWWA +L Sbjct: 357 QYLPQRRELMQWWAQWL 373 >UniRef50_B7UT12 Predicted P4-family integrase n=26 Tax=Enterobacteriaceae RepID=B7UT12_ECO27 Length = 411 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 104/398 (26%), Positives = 183/398 (45%), Gaps = 47/398 (11%) Query: 1 MHLLVHPNGSKYWRLQ----YRYEG------KQKMLALGVYPEITLADARVRRDEARKLL 50 ++L + N S+ W L R ++ + LG YPE++LA+AR + E RK + Sbjct: 33 LYLRIR-NQSRAWVLCVAMGTRINNLGRTVPRRLNMGLGPYPEVSLAEARDKARELRKQI 91 Query: 51 ANGVDPGDKKKNDKVEQ----SKARTFKEVAIEWHGTN--KKWSEDHAHRVLKSLEDNLF 104 NG++P +K K Q K +TF E E + ++ H + +LE + Sbjct: 92 RNGINPLQEKHEQKARQEILARKKKTFAECCEEVLEVKDSEMKNKKHLAQWRSTLETYAY 151 Query: 105 AALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE 163 +G++ ++E+ DLLA ++ + ++ + E A+RL+ R ++ YA + NPA Sbjct: 152 PFIGKKAVSEITKVDLLAILEPIWLT-KNETASRLRGRIETVIDYAKAKEYFEGDNPAAW 210 Query: 164 ---MAGAVASCNR----QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSE 216 + + ++ +H AL +I + ++ +G ++ A+E +L RS E Sbjct: 211 KGMLKPLLPQPSKVQITKHHAALPYNQIGSFMKELRERSG--VSPRALEFAILTAARSGE 268 Query: 217 LRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY 276 +R A WSEID E WTIP R K H VPLS A+A+LK + +F Sbjct: 269 IRGAEWSEIDLEGKTWTIPASR------------MKAAKEHRVPLSDAAVALLKALPRFK 316 Query: 277 GAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDA 336 G +F +S+ + + L+ MGY ++ HGFR+ E+ + R+ Sbjct: 317 GIS-FVFPATRKGQ--LSDTALLAVLKRMGY---TDLTQHGFRSTFRDWAGETTNYPREV 370 Query: 337 VERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 +E ++H + AAY + +R ++ W+ F Sbjct: 371 IEHALAHQLADKAEAAY-QRGTLWPKRVALMDEWSGFC 407 >UniRef50_A7JZW2 Site-specific recombinase, phage integrase family protein n=2 Tax=Vibrio sp. Ex25 RepID=A7JZW2_VIBSE Length = 471 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 107/420 (25%), Positives = 188/420 (44%), Gaps = 54/420 (12%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L + NGSK W Y K+K + LG YP +TL + R E RK + G+DP Sbjct: 52 LYLRIRKNGSKNWLFIYTDFSTKKRKKMGLGSYPNMTLDEVRKVAKELRKQMTKGIDPKL 111 Query: 59 KKKNDKVEQ--SKARTFKEVAIEWHGTNK------------------------------- 85 ++ K+++ TFK +A + + Sbjct: 112 FREKQKLDRLVESQLTFKAIAEKMLLKEEIQETTNREKLIVEERERARIKGTVFGQDEID 171 Query: 86 --KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRT 143 +HR L+ NL+ LG + + +++ I+ ++ G+LE R Sbjct: 172 RITNKVRSSHRKRLFLKRNLYPKLGNLPLTYITAAGVISVIEPMQAKGQLENVKRACCIA 231 Query: 144 TAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWA 203 +M++AV S +I N ++ A H + + E++ + + +P+TR A Sbjct: 232 NQVMKFAVNSNIIKSNCLADIKDNFAKSKVTHMLKVPPNELGEVMAIMSNNQMKPVTRCA 291 Query: 204 IELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLST 263 E+ + R+ EL RW +I+ + +WTIP +K + HLVPL+ Sbjct: 292 FEMQMHTMARADELAAMRWCDINVKNKLWTIPA------------FYTKGKREHLVPLND 339 Query: 264 QALAILKQIKQFYGAHDLIFIGDHDSHK--PMSENTVNSALRVMGYDTKVEVCGHGFRTM 321 L IL+ I+ G H +F D + K +S VNS+L + K + HGFR + Sbjct: 340 YTLGILEFIRPISGEHIHVFPSDKPNTKFPHISPYAVNSSLNLTSL--KGRLVSHGFRGI 397 Query: 322 ACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 A + L E + DA+E ++H+ +N+ RA+Y + A +L+ER +LQ+W+D++ + + Sbjct: 398 ASTYLNEHKQFREDAIEMCLAHLDKNTTRASY-NSALYLDERYEILQFWSDYIVESTGNY 456 >UniRef50_C8QZM9 Integrase family protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZM9_9DELT Length = 409 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 76/376 (20%), Positives = 148/376 (39%), Gaps = 27/376 (7%) Query: 2 HLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKK 61 + + P+G+K W Y ++GK+K + LG YP +TL AR + A L G DP Sbjct: 27 SVRIMPSGAKTWLFIYTFDGKRKEMNLGHYPAVTLEAARRKYRAAFDLFEQGNDPVAMHL 86 Query: 62 NDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLL 121 K E+ + ++ E+ + + + L ++ A G+R ++ RD++ Sbjct: 87 EKKEERRRTPFLSDLVDEYINKHAMRFKRSWAKDQAILNRDVVPAWGQRKAVDISKRDVI 146 Query: 122 APIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALEL 181 ++ + G +A Q + +AV +++ +P + + + L Sbjct: 147 LLLEKIVDRGSPGMANNCFQIIRKMFNFAVDREILEISPCTGVK--MPAPKMARDRVLSE 204 Query: 182 KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPI 241 + I L + ++ + AI+L L+ R E+ +SEI E WTIP +R Sbjct: 205 EEIRVLWSGLERAKISHEVQRAIKLILVTAQRPGEVMGMDFSEI--EGRWWTIPADR--- 259 Query: 242 PGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH--KPMSENTVN 299 +K H V L+ AL ++ + +F +P+ N + Sbjct: 260 ---------AKNGKAHRVYLTDTALELIGE-----NTGGFVFPSPRHRENPRPIGSNAMT 305 Query: 300 SALRVMGYD-TKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 A R + H R A + + E G + ++ ++H +R ++ Sbjct: 306 VAHRRNKDKIPLEDFTPHDLRRTAATFMAEMGTMD-EVIDAILNHSKMGVIR--VYNQYR 362 Query: 359 HLEERRLMLQWWADFL 374 + E++ L+ W L Sbjct: 363 YDTEKQATLEAWERRL 378 >UniRef50_A4Y9I4 Phage integrase family protein n=3 Tax=Shewanella RepID=A4Y9I4_SHEPC Length = 432 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 84/397 (21%), Positives = 157/397 (39%), Gaps = 41/397 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLAL--GVYPEITLADARVRRDEARKLLANGVDPGD 58 +++ V G YW ++Y GK++ + GVYP ++L +A+ + + L G+DP Sbjct: 34 LYIRVQTEGVAYWEVRYSVNGKRRSMVPNGGVYPAMSLVEAKAEAAKVKLLAKQGIDPLA 93 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 ++ ++ ++ +T ++ +W+ H ++ ++ A+G+ + ++ R Sbjct: 94 ER--ERQQEITIKTVNDLFDDWYQCTAPRL-KHPEIPMRMYTKDIKPAIGQLKVTDVNAR 150 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC-NRQHRP 177 D+ A + V S R VA + + +A + + NPA A A + Sbjct: 151 DIRAILHKVVKSNRPTVANKTLLFCKQLFNHACKLDVASGNPAAAFNTADAGGLEKNRTR 210 Query: 178 ALELKRIPELLTKIDSYT--GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 L L I + + A+ L L + +R EL A+WSE DF+ +W +P Sbjct: 211 VLSLNEIAAAFPVLRNSRPIFSHENYLAVALLLCLGVRKGELIAAKWSEFDFDQQVWRMP 270 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH--DSHKPM 293 ER SK +PLS + LK++K + +F + + Sbjct: 271 KER------------SKTGVGITIPLSEFVIEWLKELKIIACGSEYVFPARKASKRREYI 318 Query: 294 SENTVNSALRV----------------MGYDTKVEVCGHGFRTMACSSLVESGLWSRDAV 337 + +T+N AL +G H R + L + Sbjct: 319 ANDTLNHALAKLFGQKHDSNKQPFENLLGKAGVEHFTVHDLRRTCRTLLASLKV-PPHIA 377 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 ER ++H + + Y H ++LEERR L A + Sbjct: 378 ERCLNHKLKG-IEGTYNH-HDYLEERREALDKLAALI 412 >UniRef50_Q12EX0 Phage integrase n=5 Tax=Proteobacteria RepID=Q12EX0_POLSJ Length = 410 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 108/403 (26%), Positives = 189/403 (46%), Gaps = 38/403 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +HL V P+G++ W L+ +K + LG YP++TLA AR AR + GV+P +++ Sbjct: 30 LHLWVKPSGNRSWILRVLVGAIRKDIGLGGYPDVTLAGARDAARRARDQILQGVNPIEQR 89 Query: 61 KNDK----VEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 + K +Q+KA+TFK+ + + + H + +LE F +G + + Sbjct: 90 RQAKALLMADQAKAKTFKDCSAAFIEDRGDEWRNPKHRQQWHNTLETYAFPFIGGLFVRD 149 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE-------MAG 166 + +L ++ + + + E AAR++ R ++ +A G NPA+ + Sbjct: 150 ISLAHVLEVLRPIWKT-KTETAARVRGRIETVLDWAAVRGYRAGDNPARWKGHLDQVLPK 208 Query: 167 AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 +H A+ L + + + G + A+E +L RS E+R A WSE D Sbjct: 209 PSKVKKVEHHSAVGLDDLAGFIAAVRRVPG--MGARALEFAILTAARSGEVRGALWSEFD 266 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 +A+ W +PPER K H VPLS QA+ +LK I +F G D++F G Sbjct: 267 LKAAQWIVPPER------------MKAGEEHRVPLSKQAIKLLKSIPRFEG-SDVVFCGI 313 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 + +S+ T+++ +R M + HGFR+ E + R+ E+ ++H Sbjct: 314 K--GQVLSDMTLSAVMRRMEVNA----VPHGFRSTFRDWASERTNFPRELAEKALAHTIE 367 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDV-NRERFISPFEYA 388 + V AAY + + L +R M+Q WADF + + + P + Sbjct: 368 SKVEAAY-RRGDLLAKRMQMMQAWADFCETPVNKGTVVPLKRK 409 >UniRef50_A7JWM6 Possible bacteriophage integrase n=3 Tax=Pasteurellaceae RepID=A7JWM6_PASHA Length = 404 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 102/386 (26%), Positives = 185/386 (47%), Gaps = 22/386 (5%) Query: 1 MHLLVHPNGSKYWRLQY---RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG 57 + +L +K W Y + + +G YP+++LA+AR++RDE L+ G+DP Sbjct: 31 LFILAQKK-AKVWIYSYISPKTGKRSTKNRIGSYPQMSLAEARLKRDELNTLVLQGLDPF 89 Query: 58 DK----KKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIA 113 + ++ K +Q ++F +W + K + L+ LE++LF + Sbjct: 90 EHLAKMQREAKEKQESIQSFAYKWADWKLSKGKCKPKTMEKCLQRLENHLFPRFEGYTLE 149 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR 173 + D + + + + R+ I+ YAV G I++NP + A +S + Sbjct: 150 DFTLTDTINRLTDL-DRIMPDTLHRIAGNLIEILDYAVLCGRINFNPISVIKKAFSSVST 208 Query: 174 QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 H+PA+ + + E + + P + +E LL +R E +WS+ID+E Sbjct: 209 THQPAIMPEELAEFMQDLQKSNRTPQIKLLVEWQLLNILRPFEAVAVQWSDIDWETKTLN 268 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP +R + H VPL+ QA+AIL+++K++ G H IF D +KP Sbjct: 269 IPADRMKGG-----------KNPHSVPLTKQAIAILEEMKKYNGHHKHIFTHRTDRNKPA 317 Query: 294 SENTVNSALRVM-GYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 + TVN+A++ + G K + HG R++A + L E +E +SH +++V +A Sbjct: 318 NSQTVNNAIKRLSGGKYKGLLVAHGLRSIASTYLHERFTTETLVIEACLSHTNKDTVMSA 377 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNR 378 Y H+ L+ RR ++Q WADF++ + Sbjct: 378 Y-HRKNWLDRRRGIMQEWADFVEQCK 402 >UniRef50_B3R9I1 Prophage INTEGRASE PROTEIN n=1 Tax=Cupriavidus taiwanensis RepID=B3R9I1_CUPTR Length = 412 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 87/394 (22%), Positives = 156/394 (39%), Gaps = 25/394 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVD-PGDK 59 ++L + P+G+K + L+Y G +K+ LG +P++ +A AR + E R+LL P Sbjct: 27 LYLRLEPSGTKTFCLRYTVAGSRKLKVLGTFPDMDIAAARKQASEMRELLEVHDSLPSAS 86 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 K+ D + T ++A EW + + L L+ ++ +G+ + + R Sbjct: 87 KEVD--ALTSPITVAQLATEWEMRYCRQRYKRPDKELHYLKSDIVPVIGQELVQNVTGRH 144 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 + I + G A R ++ YAV+ G ID P + L Sbjct: 145 VSLVIGKIVDRGARTKANRTLCVLKSLFGYAVEHGYIDATPVAMTKKGAGGAEKARSRVL 204 Query: 180 ELKRIPELLTKIDS--YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 K I L +DS T+ ++L LL R E RW ++D IW +P E Sbjct: 205 NPKEIETLWHALDSRRRRMNWRTKALLKLILLTAQRPGECCGMRWEDVDLANGIWFLPAE 264 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG-DHDSHKPMSEN 296 +K H+V LS A++ILK ++ G +F + + Sbjct: 265 L------------TKSDRDHVVHLSHMAVSILKMAEKETGGSVYVFNSVVKGRDVATTVD 312 Query: 297 TVNSALRVM----GYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 + A+ M + H R A + + +G++ E+ ++H + V A Sbjct: 313 ALTRAVARMLANGEFGAMKRFTPHDLRRTASTGMANAGVYP-HITEKILNHRMKG-VLAV 370 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRERFISPFE 386 Y H E+L ER+ ++ W ++ + Sbjct: 371 YNH-GEYLPERKAAMELWGRLIEGWVGNLVGQVS 403 >UniRef50_Q0I233 Phage integrase n=5 Tax=Pasteurellaceae RepID=Q0I233_HAES1 Length = 434 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 109/389 (28%), Positives = 182/389 (46%), Gaps = 24/389 (6%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V +GSK WR Y Y K+ +++G YPEI+L AR RDE LLA +DP Sbjct: 50 LFLSVEISGSKIWRFNYYKPYTKKRTEISIGKYPEISLLQARKIRDEYLALLAQNIDPKT 109 Query: 59 KKKNDKVEQS-KARTFKEVAIEWHGTN---KKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 + + Q+ + TFK V +W+ K +ED R + LE ++F L E ++E Sbjct: 110 HRDQKQNTQALERNTFKYVCAKWYAEIYPTKAPNEDTRARNWQRLERHIFPKLAEIPLSE 169 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 + R L+ + + G +L + A + Y ++ G+I+ + + + Sbjct: 170 ITPRLLIDVYREI---GASNTLDKLHRLVKATLDYGIKLGIIEGHNCNLAKDDFIAPLAK 226 Query: 175 HRPALELKRIPELLTKIDSY----TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 + PA+ +PELL I++ T +A LTLL +R EL W+ ID Sbjct: 227 NHPAITPAELPELLKAINTAFKEGKLEFNTLFAFNLTLLTGLRQKELTRIEWAFIDDGNK 286 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 + IP E H++PLS+Q + ++ I+QF G+ +F + + Sbjct: 287 LLIIPSENMKQTRKLREQP-----KDHIIPLSSQMIKLIGTIRQFNGSSPYLFPRVRNRN 341 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSH--MARNS 348 K + +TV++ALR GY K + HG R + S L + G +S E ++H + Sbjct: 342 KTIGLDTVSNALRDNGYRDKQD--AHGLRVVFRSYLSQIG-FSVVVGELAIAHNSTGKGK 398 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVN 377 ++A Y + ++LEER+ Q W D+ + Sbjct: 399 IQAIY-DRYDYLEERKQAYQAWGDYCEKC 426 >UniRef50_C6RKK3 Phage integrase n=3 Tax=Acinetobacter RepID=C6RKK3_ACIRA Length = 426 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 96/412 (23%), Positives = 180/412 (43%), Gaps = 53/412 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGK----------QKMLALGVYPEITLADARVRRDEARKLL 50 + L V N S+ W L+ + ++ + +G YPE++LA+AR + E R + Sbjct: 30 LCLNVEGN-SRVWILRAVVGKRLDKDGKLKPHRRDIGIGPYPEVSLAEARAKATELRLQI 88 Query: 51 ANGVDPGDKKKNDKVE----QSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLF 104 +G+DP K+ + + + +TF E A + +E H + +LE ++ Sbjct: 89 RSGIDPIAHKQEQLEKLYVQKLRDKTFMECAKVVIANKTRELKNEKHIGQWTSTLETYIY 148 Query: 105 AALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM 164 LG+ +I + D+ ++ + + + E A R++ R I YA G + + E Sbjct: 149 PTLGDISIGTITKVDIAEVLRPIWIK-KNETAKRIRGRIETIFDYAKAMGYFEGDNPAEW 207 Query: 165 AGAVA------SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELR 218 G + + P+L +++ + + G ++ A+E +L RS E+ Sbjct: 208 KGNLEPIFGNIKQESRPHPSLPYEQVAGFIQHLRQKKG--ISPKALEFAILTACRSGEIF 265 Query: 219 FARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA 278 A+W EIDF+ +W IP ER K H VPLS +A+ +LK I+++ Sbjct: 266 GAKWQEIDFKNKVWIIPKER------------MKANKEHRVPLSQEAVNLLKSIQEYTQP 313 Query: 279 HDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVE-------------VCGHGFRTMACSS 325 D IF + +S+ ++ ++ M E + HGFR+ Sbjct: 314 QDFIFPAPRNG-AMLSDMSLTILIKRMHEQKLKENGLGYIDPKQNRVITTHGFRSTFRDW 372 Query: 326 LVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 + + R+ E ++H + V AAY+ + +LE+R+ ++ WA+F N Sbjct: 373 SADKTDYPREVCEHVLAHKLPDEVEAAYL-RGAYLEKRKGLMADWAEFCSAN 423 >UniRef50_Q4FSX1 Probable phage integrase n=1 Tax=Psychrobacter arcticus 273-4 RepID=Q4FSX1_PSYA2 Length = 444 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 108/386 (27%), Positives = 169/386 (43%), Gaps = 19/386 (4%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L + N + +R ++ GK+K LG YP TL AR LLA G+DP Sbjct: 70 LNLYIRDNKTTTFRHRFTSPVTGKRKNFTLGAYPVFTLEQARDMYRNNLSLLAGGIDPVF 129 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKKWS--EDHAHRVLKSLEDNLFAALGERNIAELK 116 ++ ++ TF E+A EW + E ++ A +G I +K Sbjct: 130 HHQDAHNKKRAMPTFSELADEWLQSQIASKQFEHRTIEQKRTHIAYAAAYIGRMPIDHIK 189 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ-- 174 T D+L IK +E A R++ I A+ G ID NPA +A + + Sbjct: 190 TPDVLRAIKDIEKKTIP-TAKRVRGVCQRIFALAIGQGYIDNNPAIAVADLMLPKPKTEH 248 Query: 175 HRPALELKRIPELLTKIDS-YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 H +E +LL+ IDS + ++L L+F R+ ++ RW IDF+A WT Sbjct: 249 HHAIIEPIAFGKLLSDIDSVTDFYGHAQNILKLQALLFQRNGDMCSMRWDAIDFDAKTWT 308 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 P++ G M + +VPL TQA+ L+ + +F K Sbjct: 309 FSPQKTGNRGD--------MVASLVVPLPTQAIEHLRALHALTSKTPYVFYNSRRKEKFE 360 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 + +N L +GY K HGFR A + +VE S E Q+ H R++ AY Sbjct: 361 HQQQLNKFLWRLGY--KDVHTPHGFRASARTLMVEQLGISETLAELQLGHNVRDANGRAY 418 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRE 379 ++ +++RR M+Q WAD+LD R Sbjct: 419 -NRVTMIDKRRDMMQRWADYLDQLRR 443 >UniRef50_D0CDZ4 DNA integration/recombination/inversion protein n=4 Tax=Acinetobacter RepID=D0CDZ4_ACIBA Length = 402 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 109/391 (27%), Positives = 185/391 (47%), Gaps = 32/391 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L + +GSKYW Y GK+ L+LG YPE++L DAR RD+ +KL+ G+DP Sbjct: 33 LYLRIDQSGSKYWIFNYTRPFLGKRNDLSLGTYPEVSLEDARTIRDKYKKLIKQGIDPAM 92 Query: 59 KKKNDK--VEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 ++ K ++ TF+ +A W ++ + ++ L +++ + E +L Sbjct: 93 ERIETKSQKQKEAENTFRVIAELWL-HKRELEQKQDEETIRRLNHDVYPYISELTFPQLT 151 Query: 117 TRDLL-APIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 L K + G L VA RL+ I + A + LI YNP +++ + + Sbjct: 152 LEILETKVFKRIVERGALSVAKRLKSDLNQIFKSARKKKLIQYNPIEDIE--LPKPQAGN 209 Query: 176 RPA-LELKRIPELLTKIDSY-----TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 PA E + + +L KI +Y T+ A+++++L F R E+R + E Sbjct: 210 FPAVTEEQDLAPMLNKIWNYSKLYPRCLLTTQVALKISVLTFQRPGEIRMLKKEFYYREE 269 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 + K + H+VPLS QA +++ I + + IF+G D Sbjct: 270 RCFKFTAS--------------KTKQLHIVPLSDQAFDLIESIIDLHPYSEYIFVG-RDG 314 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 +S+NT+NSAL+ +GY E HGFR A + L E D +E Q++H +++ Sbjct: 315 KTVISDNTINSALKRLGYGG--EQTAHGFRATARTMLDEILEQRVDFIEHQLAHKVKDNN 372 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 AY ++ + L RR M+Q WAD+L+ Sbjct: 373 GTAY-NRTKFLNNRREMMQEWADYLESLLSD 402 >UniRef50_Q1NM52 Phage integrase n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NM52_9DELT Length = 406 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 88/381 (23%), Positives = 162/381 (42%), Gaps = 29/381 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + LLV P+G + W L+Y++EGK + + LG YP+++L AR + R ++ G+DP K+ Sbjct: 26 LVLLVLPSGRRSWLLRYQFEGKPRRITLGEYPDMSLLQARNASEATRSIIKQGLDPALKR 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 +K + T ++ E+ K S + +E ++ G+R +AE+ RD Sbjct: 86 TEEKTAHKTSPTVSDLLTEYWDMELKESP-SGKERRRLVEKDVLPPWGKRKVAEITRRDA 144 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + V RLQ + +A + G+++++P + + L Sbjct: 145 ALLLDTVRAR-APVTGNRLQGVLVRMFNFAAERGVLEHSPLMGLRK---KKEQPRSRVLA 200 Query: 181 LKRIPELLTKID----SYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 K I L + + +++ A+++ LL R E+ W EID + W IP Sbjct: 201 DKEIKLLWDALALDNTAMDIYRVSKLALKMILLTGQRPGEVCGMTWDEIDGD--TWNIPA 258 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYG-AHDLIFIGDHDSHKPMSE 295 ER K + H VPL + AL I++Q +++ +F H P++ Sbjct: 259 ER------------MKSKEPHNVPLGSMALEIIEQARRYSPRGSTFVFKSSHFKEGPITP 306 Query: 296 NTVNSALRVM--GYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 ++++ A+ H R + L E G+ ER + H + + A Y Sbjct: 307 HSLSKAILRHWQEMGVTERFTPHDLRRTLRTRLAEIGV-DDVVGERVLGHKLQG-IMAVY 364 Query: 354 IHKAEHLEERRLMLQWWADFL 374 ++ + +E+R L W L Sbjct: 365 -NRHSYDKEKRQALALWERKL 384 >UniRef50_UPI0001BCF8EC putative bacteriophage integrase n=1 Tax=Mannheimia haemolytica serotype A2 str. BOVINE RepID=UPI0001BCF8EC Length = 399 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 88/386 (22%), Positives = 172/386 (44%), Gaps = 23/386 (5%) Query: 1 MHLLVHPN-GSKYWRLQYRYEG---KQKMLALGVYPEITLADARVRRDEARKLLANGVDP 56 +++ + GS W ++ +++ + LG YP + AR E L+ G+ P Sbjct: 27 LYIKANKAAGSFSWLYKFTNPHNKAQRQKIILGRYPRTPIDFARKIAMEYNALVKQGIHP 86 Query: 57 GDKKKNDKVEQS-KARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 + + K ++ +A TFKE+ + S + + +E +F G+ + ++ Sbjct: 87 TEHQAQQKQQKEIEAMTFKEMTSLYREFRA-DSVKNVDDAISRVEMYIFPKFGDLPLNKI 145 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 + +K +E G+ ++ + I+ YA G ID+NP + + +H Sbjct: 146 SLAEWHRTLKPMEA-GKNNTLLKICSTSKQILDYAQTCGYIDFNPLTTLRASFRKKKAKH 204 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 P +E KR+ E + + T+ +IE LL R +E A+W+EIDF+ +W +P Sbjct: 205 NPTIEPKRLAEFIRDLFLSDVERSTKLSIEFQLLTATRPNETAKAKWAEIDFKNRLWKLP 264 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 ++ K H++ L++QALA+L+ I++F G + IF S Sbjct: 265 ADK------------MKTGKPHIITLNSQALALLENIRRFTGDREYIFSSSRSKTGHQST 312 Query: 296 NTVNSALRVM-GYDTKVEVCGHGFRTMACSSLVESGLWSRD--AVERQMSHMARNSVRAA 352 T N+A++ + G + HG R++ + L ++ ++H+ N Sbjct: 313 QTANNAIKSIQGGKYHSVLTSHGLRSVFSTYLNGLHDPMIHNVHIDACLAHVVGNGTSRT 372 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNR 378 Y H A H E++R ++Q W D+++ + Sbjct: 373 YNHSA-HEEQKRYIMQKWGDYVEQCK 397 >UniRef50_C8Q072 Phage integrase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q072_9GAMM Length = 402 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 116/385 (30%), Positives = 198/385 (51%), Gaps = 20/385 (5%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L V +G+K W LQY + K+ M+ LG YP + LADAR +++ ++LL+ +DP Sbjct: 31 LLLNVASSGTKTWYLQYSKPFTKKKDMVNLGRYPTVNLADARKQKNYCQELLSKDIDPKT 90 Query: 59 --KKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 +++ + E FK V EW T KK++ ++ + + A +G + + ++ Sbjct: 91 HFEEEARRKEYEHRTDFKSVFEEWLPT-KKYAPKTVEKMENYI-KEMLAVIGNKPVNQVT 148 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 T D + +K VE +G L +++ + + YA+ +G NP + G + H Sbjct: 149 TEDCMRVLKPVESAGHLTKLEKMRSMMSQTIAYAIATGRAKENPCIHLRGVFMTPETTHA 208 Query: 177 PA-LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 PA L+ + L+ I SY G TR A+ +++F R E+R +W +IDFE + W Sbjct: 209 PAILDEAGLTRLVQSIYSYHGHFATRKALLFAIIMFARPGEIRHLKWQDIDFEYNNWQYT 268 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 P + + + PL TQA+ ILK++K + +L+F + + +P+SE Sbjct: 269 PNKTRKS----------TGVSMMSPLPTQAVEILKEMKAY-KNAELVFPSSNSTSRPLSE 317 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 NT+N ALR MG++ E GFR +A + L E + +E Q+ H R+S AY + Sbjct: 318 NTLNQALRRMGFEN-TEQTSQGFRAIARTVLEEKFKYDYRWIELQLGHQVRDSNGRAY-N 375 Query: 356 KAEHLEERRLMLQWWADFLDVNRER 380 + + L+ERR M+Q WAD+L ++ Sbjct: 376 RVQWLDERREMMQKWADYLFSLIKK 400 >UniRef50_A1W6C2 Phage integrase family protein n=8 Tax=Burkholderiales RepID=A1W6C2_ACISJ Length = 459 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 88/388 (22%), Positives = 176/388 (45%), Gaps = 36/388 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + K W +Y + + +G + LA+AR + +AR LL +GVDP + Sbjct: 27 LYLQITKALVKSWIFRYARGTGEHFMGIGPVHTVNLAEAREQARKARLLLRDGVDPLMHR 86 Query: 61 KN----DKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 K Q+ + F++ E+ ++K+ +E H + +L + G+ ++ Sbjct: 87 AEALAKAKAVQASNKIFRDCMDEYIKSHKESWRNEKHQKQWEATLVEYACPVFGKMHVRL 146 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE-------MAG 166 + T +L ++ + + + E A+R+++R ++ +A G + NPA+ + Sbjct: 147 INTPLVLQVLEPIWKT-KTETASRVRERIERVLAWATTQGFREGENPARWRGHLQELLPK 205 Query: 167 AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 +H P+L + + + G + A++ T+L R+ E+ FA+W+EID Sbjct: 206 PSKLKKVRHHPSLPYGHVGAFVRLLAREKG--IAARALQFTILTACRTGEVIFAKWNEID 263 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 +A +W IP ER K H VPL A+ +L++++ +F G Sbjct: 264 LDAKVWIIPKER------------MKAHKEHRVPLVRDAVTLLERLRGLDPV--WVFPGA 309 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 + +PMS + + L M + ++ HGFR+ + E L+ ++ E ++H Sbjct: 310 KQN-RPMSNMAMANVLERMQ---RSDITVHGFRSTFRTWAAERTLYPKEMPEMALAHKVG 365 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFL 374 V AY + + E RR +++ WA++ Sbjct: 366 TEVEEAY-RRTDLFERRRALMRDWAEWC 392 >UniRef50_UPI0000E0F7C9 site-specific recombinase, phage integrase family protein n=2 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0F7C9 Length = 374 Score = 304 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 120/381 (31%), Positives = 187/381 (49%), Gaps = 37/381 (9%) Query: 1 MHLLVHPNGSKYWRLQYR-YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L V +GSK WR +Y+ + G M ALG YP+I+L AR D+ Sbjct: 25 LYLEVTKSGSKNWRYRYKNHTGSWTMKALGSYPKISLEKARALLDDL------------- 71 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 + V + K +FKE A EW S + H V + +E+ L LG IA +K +D Sbjct: 72 ---EVVAEYKCISFKETASEWLVYKGYTSYKNKHLVHRRIENYLLPKLGNMTIANIKPKD 128 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 +L +K +E G LE+A R+Q + I +Y VQ+ + NPAQ + G + +H PA+ Sbjct: 129 ILPILKQIEAKGHLELARRVQNILSQIFKYGVQNLYCETNPAQPLQGCTKQPSVRHMPAI 188 Query: 180 -ELKRIPELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 E LL IDS + P + ++L +F+RS +R A+ IDF+ +W IP + Sbjct: 189 VEQSEFARLLATIDSASNLMPSVKLCLQLAPHVFLRSQSIRMAKPEHIDFDRKLWVIPKD 248 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 KM H +PL+ + +L+ + +F G + P+SENT Sbjct: 249 --------------KMGREHWIPLTEPVIEMLQTAIAQTNG-EYLFNGIK-PNSPLSENT 292 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 +N ALR +G D + V HGFR+ + E D +E Q+ H+ N V+AAY ++ Sbjct: 293 LNHALRSLGVDKQTHV-FHGFRSSFSTLAREHCRLPGDLIELQLGHIEGNQVKAAY-DRS 350 Query: 358 EHLEERRLMLQWWADFLDVNR 378 + LEERR ++ W+ +L Sbjct: 351 QRLEERRELMDKWSKYLAELA 371 >UniRef50_A7H3V7 Putative site-specific recombinase, phage integrase family n=2 Tax=Campylobacter jejuni RepID=A7H3V7_CAMJD Length = 399 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 111/388 (28%), Positives = 177/388 (45%), Gaps = 32/388 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L ++P+G K + Y+ + K + LG YP + LA+AR +RD + LA D Sbjct: 25 LLLCIYPSGKKTFIFNYKCPKTLRYKRITLGEYPTLNLANARKQRDNLKVNLAEN-DSIR 83 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 +K TFKE+A+E K + SE + L+ F GE + +L+ Sbjct: 84 EK--------SEITFKELALEKMELKKLELSEKTYKSYVSYLQRFAFGIYGEIILDKLQI 135 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGA---VASCNRQ 174 +D+L + E A + I R+ V I NP + + ++ Sbjct: 136 KDILKSFEKFRKENIREGADKFFTLLNEIFRHGVIKEYIKSNPMANLNRKELLINKASKN 195 Query: 175 HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 H LE K I L+ I Y G + A +LL RS +R A+W +ID E IW I Sbjct: 196 HATLLETKEIKALVDNIIDYKGYISVKIAAMFSLLTAQRSFSIRSAKWEDIDLENGIWYI 255 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P E KM+ H +PL++Q + +LK+ K+ +F + +S Sbjct: 256 PQE------------DMKMKRAHTIPLNSQCVYMLKKYKEMSINTGYLFYSLRSKSEIIS 303 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVE---SGLWSRDAVERQMSHMARNSVRA 351 +NT+ S R MGY + HGFR M + E S D +E ++H+ +N +++ Sbjct: 304 DNTIRSMFRRMGYSND-DFTPHGFRAMFSTLAHENRNKHQMSSDIIELCLAHVEKNKIKS 362 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRE 379 AY H A +L+E+ +++QWW D+LD E Sbjct: 363 AYNH-ALNLKEKAILMQWWGDYLDEIAE 389 >UniRef50_C6RLT7 Phage integrase n=2 Tax=Acinetobacter radioresistens RepID=C6RLT7_ACIRA Length = 405 Score = 303 bits (777), Expect = 7e-81, Method: Composition-based stats. Identities = 122/389 (31%), Positives = 191/389 (49%), Gaps = 18/389 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V GSK+WR +YRY KML +G YPEI+L+ AR + E R +LA +DP ++ Sbjct: 25 LCLEVRTTGSKFWRYRYRYLNIPKMLTIGPYPEISLSYARDKTREYRGMLAKNLDPVTEQ 84 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K A TFK ++ E+ K S++ L+ + ++ +G + I E+ + Sbjct: 85 KKALDSAMDAIQHTFKSISNEYLEKYKDTHSQEWYENRLRYFKKDINPVIGNKPIKEVNS 144 Query: 118 RDLLAPIK------AVEMSGRLEV-AARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 D+ + G EV A ++Q +M+YA+ + I +P + + Sbjct: 145 NDIRVILDNTITRIRKSKRGTGEVKAIYVRQICAEVMQYAIITLKIINDPTIALRSYIRR 204 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 H LE K +L I+ Y G T+ A+ L +R+ E+R A+ S ++ + + Sbjct: 205 PPVNHATPLEEKDKKVILALINQYGGTTGTQNALRTALYSMLRTIEIRRAKKSFVNLKDA 264 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 TIP R +K R K TH+VPLSTQ L I+K+ Q Y +F GD D Sbjct: 265 TLTIP--RVSNAQIKDGKRNMKKNRTHVVPLSTQMLEIIKEQLQLYPDSIYLFPGD-DGI 321 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 + +NT+N AL MG + H FR A + L E +S+D +E Q++H+ + R Sbjct: 322 SMLGKNTLNEALVNMG---LGHITMHDFRATASTYLNEQ-NYSKDWIELQLAHVDGDMSR 377 Query: 351 AAYIHKAEHLEERRLMLQWWADFLDVNRE 379 A+Y H A L++RR M+Q AD +D E Sbjct: 378 ASYNH-ASWLKDRRQMMQHLADTIDHWHE 405 >UniRef50_Q2SP99 Integrase n=2 Tax=Gammaproteobacteria RepID=Q2SP99_HAHCH Length = 416 Score = 303 bits (776), Expect = 9e-81, Method: Composition-based stats. Identities = 87/402 (21%), Positives = 163/402 (40%), Gaps = 29/402 (7%) Query: 1 MHLLVHPNGSK---YWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVD 55 + L ++P K W +YR K L+LG YP I+L AR + + R+ L G+D Sbjct: 26 LSLRIYPKRGKIARTWVFRYRRPATKKPAKLSLGDYPVISLRAARQQAEIMRQQLFEGLD 85 Query: 56 PGDKKKNDKVEQSKARTFKEVAIEWHGTNKKWSE---DHAHRVLKSLEDNLFAALGERNI 112 P +K + E + A T +++ W K E +L +LG Sbjct: 86 PQYVQKEQRAENANAITTQQLFESWLTLQKSAKEVTDRTLADHEARWRVHLEKSLGPLLA 145 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM--AGAVAS 170 + R + A + ++ G E + + R+A + LI NP + + + Sbjct: 146 KHVIRRQIAAVLDSMVAKGIKEETRKCLCLLKMLFRFAEERHLIKENPIEGLSAKSFKIT 205 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 AL L + +DS + P T A +L +L R E+ RWSE+D Sbjct: 206 AGAPRDRALPLSELRSFWRLLDSASITPATANAFKLLILTGARRGEVTMMRWSELDLTQG 265 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +W +PPER +K R H + L A+ +++ ++ G + + + Sbjct: 266 MWVLPPER------------TKNRKAHTLYLPNLAMRLIESMRPISGHGEYVL-SLGNGI 312 Query: 291 KPMSENTVNSALRVM--GYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 P+S + LR + ++ H R A ++ E S +E+ ++H R+ Sbjct: 313 TPLSTEGLTVTLRRLSTRLESVPHFTVHDLRRSAATAWGEHLKTSPHVIEKMLNHQPRDR 372 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVNRE---RFISPFEY 387 + A Y +A +++E+++ + W + ++ + + P Sbjct: 373 LVATY-QRAAYIDEQKMAWKAWGEMVENHVANDFGNVVPLHA 413 >UniRef50_Q1N9F3 Putative integrase prophage protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9F3_9SPHN Length = 443 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 107/400 (26%), Positives = 183/400 (45%), Gaps = 29/400 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G K+WR +YR K+K L LG YPE+ L AR EARKL++ G DP +K Sbjct: 26 LFLHVTSAGGKFWRYRYRIGPKEKTLTLGRYPEMGLVAAREAHHEARKLVSEGKDPALEK 85 Query: 61 KNDKVE--QSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + K+ ++ TF+++A EW + WS +A RV E +L+ G I ++++ Sbjct: 86 QKAKIARIEAAKITFRKLAEEWLADQEPIWSVSNAKRVRHRFERDLYPLFGNLPICQIES 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNP---AQEMAGAVASCNR- 173 +L ++ +E G +E A R++ ++ R A GL+D+ E+ A+ R Sbjct: 146 APILRALRKIEARGSIETAKRVRGYIKSVFRRAKGEGLVDHAILLEIDEIKDALKPARRG 205 Query: 174 QHRPALEL-KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE---IDFEA 229 +PAL E +D T + A L L +R LR A WSE ID++ Sbjct: 206 SKQPALTEVPETLEFQKAVDRSTSSLTVKLASRLLALTLVRVGVLRTALWSEFEGIDWDN 265 Query: 230 -------SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLI 282 IW IP R + + H VPL QA+ +L+ ++ G L+ Sbjct: 266 PDAIPNAPIWRIPASRMKLDVEDKGNPAF----GHDVPLPHQAVEVLRALRPLTGGFALL 321 Query: 283 FIGDHDSHKPMSENTVNSALRVM-GYDTKVEVCGHGFRTMACSSLVESG-----LWSRDA 336 F +PMS+ +++ + M G K + HG+R+ + + E R Sbjct: 322 FPNSKSWREPMSDAALSTMYKRMGGGRYKNVMVPHGWRSSFSTIMNERAAELERDGDRMV 381 Query: 337 VERQMSHMARNSVRAAY-IHKAEHLEERRLMLQWWADFLD 375 ++ ++H+ + + +++ + + R ++Q WAD + Sbjct: 382 IDLVLAHVPPGVSASEWSYNRSRYRKPRGTLIQIWADLIT 421 >UniRef50_B7XGJ8 Integrase n=9 Tax=root RepID=B7XGJ8_PSEPU Length = 419 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 108/385 (28%), Positives = 173/385 (44%), Gaps = 33/385 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V K W +Y ++ LALG +P ++L DAR+ D+ R +A GVDP ++ Sbjct: 24 LILRVSATLRKSWVFRYMLAKQRHDLALGTFPALSLRDARLEADKYRLDIARGVDPAAER 83 Query: 61 KNDKVEQS----KARTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K ++ + TF+ A + T+ WS+ H + SL +++ A+G IAE+ Sbjct: 84 AKVKAAKASRTTTSHTFRASAERYIRTHSSSWSKKHHQQWQNSLTKHVYPAIGGFRIAEV 143 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE---MAGAVAS- 170 T D+L + + A R++ R ++ A L NPA+ + + Sbjct: 144 DTDDILDVLTPIWSK-IPVTANRVRNRIELVLDAAKALKLRQGENPARWRGHLDKLLPKQ 202 Query: 171 -CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 P+ R ELL ++DS G A+E +L R+ E+ A+W EID+E Sbjct: 203 SHTVVPFPSPTPLRTAELLARLDSLDGS--AARAVEFAILTATRNQEVSGAQWPEIDWEE 260 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 IW IP ER K H VPL+ Q L +L+Q Q IF+ Sbjct: 261 KIWYIPAER------------MKAGKAHRVPLTEQMLEVLRQ--QVGKHDKWIFLNS-WR 305 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 P+ N + L + D V HGFR+ + E R+ E ++H + V Sbjct: 306 TGPIPGNAMARVLDQLQVDG---VVPHGFRSTFRTWAAEETDHQREVCEMALAHTLNSKV 362 Query: 350 RAAYIHKAEHLEERRLMLQWWADFL 374 AAY ++ + L++RR +++ W DFL Sbjct: 363 EAAY-NRGDLLDKRRALMKDWGDFL 386 >UniRef50_C6N3S0 Putative phage integrase family protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N3S0_9GAMM Length = 397 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 110/380 (28%), Positives = 182/380 (47%), Gaps = 25/380 (6%) Query: 1 MHLLVHPNGS---KYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPG 57 + L + P+ K + +++++ K + + +G Y + L AR R ++ +G+DP Sbjct: 24 LVLELRPSKKQLKKIFIFRFQWDKKPQTITIGDYRSVGLGAARDIALAYRNMVNSGIDP- 82 Query: 58 DKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAH-RVLKSLEDNLFAALGERNIAELK 116 + + + TF+ VA +W K +D A R KSL ++ +G++ I ++ Sbjct: 83 --RSKNVEADQEKITFEVVADQWFQKYKGTWKDFARNRHSKSLSRDIIPLIGDKPIDDIT 140 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV-ASCNRQH 175 DLL IK E G +VA RL R +I +AV S L + P + A+ + Sbjct: 141 KADLLFIIKPHEDLGHHDVAHRLYARLQSIFEFAVGSSLTENFPFIGLKKALIPKPRVIN 200 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 +PA+ E++ I + + +EL +F R +ELR A+WSE D + S W IP Sbjct: 201 QPAISSNNAHEMMRVIKQTNSTKIVKVYMELLAHLFTRPTELREAKWSEFDLQKSEWNIP 260 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH-DSHKPMS 294 ER KM H VPL+ L +LK+++ G +F KP+S Sbjct: 261 AER------------MKMGIPHWVPLTPHVLNLLKELRLITGFTPYLFSSPALKKAKPIS 308 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 E +V L G+ K HGFR++A S L E G + DA+E Q++H + VR Y+ Sbjct: 309 EASVRKLLHNAGF--KNRHTAHGFRSLASSVLHEQGNFRSDAIEAQLAHKVQG-VRGVYL 365 Query: 355 HKAEHLEERRLMLQWWADFL 374 +A+ ERR ++ W++ +L Sbjct: 366 -RADFKAERRELMHWYSSWL 384 >UniRef50_A1U0R6 Phage integrase family protein n=2 Tax=Gammaproteobacteria RepID=A1U0R6_MARAV Length = 432 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 98/415 (23%), Positives = 173/415 (41%), Gaps = 49/415 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L + P+GS+ W L+ + ++ + LG YPEI+LA AR + E ++ + +G+DP ++K Sbjct: 40 LLLRITPSGSRQWILRAKVGNRRPDMGLGPYPEISLAQARDKAREMKEKIRSGIDPLEEK 99 Query: 61 KNDK----VEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 + K EQ TF++ ++ K + + SL LG+ + E Sbjct: 100 RTLKRALLAEQISTLTFQKAMEKYIKMKAKEFRNPRQEKQWTNSLNTYAIPHLGKLPVRE 159 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQE-------MAG 166 + + + + + + E A R++ R I+ + G NPA+ Sbjct: 160 IDLPHIKQVLDPIWET-KTETANRVRARIENILGWCAIHGYRSAENPARWQGYLDEVYPS 218 Query: 167 AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSEL--------R 218 R H AL + +PE + + TG A+E +L R++E+ Sbjct: 219 PEKIKKRGHFAALPVDDMPEFMRDLKKRTG--TAARALEFLILTASRTNEVIGDKRIGKA 276 Query: 219 FARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA 278 W EID +WT+P +R K H VPL+ A+ +LK + + Sbjct: 277 GVTWQEIDLARKVWTVPADR------------MKSEKIHRVPLTDSAIELLKGMGEGSPE 324 Query: 279 HDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVE 338 DLIF G S N + + L+ M + HGFR+ E ++ + E Sbjct: 325 -DLIFPGPKGGIP--SNNFLTALLKRMER----PITAHGFRSTFKDWARERTAYADEVSE 377 Query: 339 RQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL----DVNRERFISPFEYAK 389 ++H+ ++ RAAY ++E +++RRLM+ W F + K Sbjct: 378 LALAHVNSDATRAAYA-RSELIDKRRLMMADWEQFCMHGETKKESGKVVAIGEGK 431 >UniRef50_C8Q013 Phage integrase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q013_9GAMM Length = 455 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 111/395 (28%), Positives = 181/395 (45%), Gaps = 25/395 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 ++L+V PN +K W +Y GK + ++ G+YP ITLA A E + LL+ +DP D Sbjct: 33 LYLMVRPNETKSWLFRYTSPNTGKSQRISFGIYPSITLARAHDIWQEYQDLLSKNIDPRD 92 Query: 59 KKKNDKVE--QSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 +K K ++ RTF A E+ T K + + + + L + E I E+ Sbjct: 93 NRKAVKQALLENDDRTFGRFADEYFDTLKTILKPNTLQRKLNCLKLLKDSFAETPIDEIT 152 Query: 117 TRDLLAPI-----KAVEMSGRL-EVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS 170 +L+ + + V+ G+ E A R + I +YA G +PA + + Sbjct: 153 PPQMLSMLIDVQNQFVKADGKPTEKAERCASIASDIFKYASARGFCSTDPASMVKSQLIK 212 Query: 171 CNRQHRPA-LELKRIPELLTKIDSY--TGRPLTRWAIELTLLIFIRSSELRFARWSEIDF 227 HRPA ++ + +LL IDS T ++ L ++F+R+ +LR RW+++DF Sbjct: 213 PVYGHRPAIIQPDKFAKLLQDIDSLKDKVDSNTNSSLRLLPMLFVRNGDLRRMRWADLDF 272 Query: 228 EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH 287 + W P + M +VPL QA+ IL+ + G + +F Sbjct: 273 NEAKWRFQPLKGEGKEH--------MVRDMVVPLPRQAIEILQHQYKINGHSEFVFYSPS 324 Query: 288 -DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 + +S+NT N L+ +GY C HGFR A + L E + VE + H+ + Sbjct: 325 AKKNGIISDNTANKHLKELGYQNV--HCVHGFRASAKTMLQEQLKYPAVIVEMGLGHITK 382 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 + AY + E LE+R M+Q WAD+LD R Sbjct: 383 DQNGTAYG-RFEFLEDRAEMMQTWADYLDALRNDE 416 >UniRef50_Q2T3P2 Integrase n=31 Tax=pseudomallei group RepID=Q2T3P2_BURTA Length = 409 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 104/391 (26%), Positives = 182/391 (46%), Gaps = 36/391 (9%) Query: 1 MHLLVHPNGSKYWRLQY-RYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 + LLV PNG KYW+ +Y + +G++ ++ +G YP ITL AR R+E R + G DP Sbjct: 29 LALLVKPNGLKYWQFRYMKPDGREGLIQIGPYPRITLEAARAARNEHRVAVQGGDDPATL 88 Query: 60 KKNDKVEQ----SKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIA 113 +K +K + ++A FK+ A + + H + +L + +G A Sbjct: 89 RKQEKARRKIDAARALNFKQCATAFIEARSAEWVNPKHTQQWTNTLSTYAYPIIGALRPA 148 Query: 114 ELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE-------MA 165 ++ T + ++ + ++ + E A+R++ R +++ +A GL D NPA+ +A Sbjct: 149 DIDTDLVRKVLEPIWLT-KNETASRVRGRIESVLDWAKVRGLRDGENPARWSGHLDQLLA 207 Query: 166 GAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI 225 +H AL I + ++ G A+E T+L +R+ E+ AR E Sbjct: 208 APGKVQKPKHHAALPFTEIGAFVAELRGMVG--TAARALEFTILTAMRTGEVIGARHDEF 265 Query: 226 DFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG 285 D +A +WT+P ER K + H VPLS+ AL +LK + ++F G Sbjct: 266 DADAQLWTVPAER------------MKAKRAHRVPLSSSALELLKTL-PTSADSPVVFEG 312 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 +P+S + L M + HGFR+ E +S + VE ++H Sbjct: 313 MRAR-RPLSNMAMLQVLERMKRGA---LTVHGFRSTFRDWAAECTPFSNEVVEMALAHAI 368 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFLDV 376 R+ AAY + + ++RR ++Q WAD ++ Sbjct: 369 RDKTEAAY-RRGDLFDKRRTLMQAWADHIEN 398 >UniRef50_A1ATP4 Phage integrase family protein n=2 Tax=Desulfuromonadales RepID=A1ATP4_PELPD Length = 449 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 82/424 (19%), Positives = 156/424 (36%), Gaps = 56/424 (13%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 + V P+GSK W Y ++GK++ + LG YP++TL AR R ++A++ + N +DP + + Sbjct: 39 IRVMPSGSKTWLYLYAFDGKRRKMNLGSYPDVTLETARGRFEDAKRKVKNNIDPMAEAEE 98 Query: 63 DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLA 122 E+ KA T ++ ++ + K + + + L + A G+R A++ RD+L Sbjct: 99 QAEERRKAPTVADLVHDYIERHAKRFKRSWAKDEQILNREVVPAWGKRKAADVTKRDILR 158 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELK 182 ++ + +A Q + +AV+ ++ + P + + S L Sbjct: 159 LLEEIVNRNAPAMANNTFQIIRKMFNWAVEQDILQHTPCTGVK--LPSPKLSRDRVLSES 216 Query: 183 RIPELLTKI--DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 I L + R A+ L L R E+ SE+D WTIP ER Sbjct: 217 EIKTLWENLGRPDAGMSDGVRRALRLILTTAQRPGEVTGLHTSELD--GCWWTIPAER-- 272 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAH----------DLIFI-GDHDS 289 +K TH V LS AL I+ Q +F Sbjct: 273 ----------AKNGKTHRVYLSGLALEIINQAIAQAKKSRETPYDQEYNGYVFPCHHKSK 322 Query: 290 HKPMSENTVNSALRVM-----------------------GYDTKVEVCGHGFRTMACSSL 326 KPM + + A+ H R + + Sbjct: 323 EKPMGDTALAVAVGRALASPLTDDKGNPLFTAAGKPATENRLGIDHFTPHDLRRTTATFM 382 Query: 327 VESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDV-NRERFISPF 385 G + + ++ ++H + ++ ++ + E++ L+ W + L + Sbjct: 383 ASMG-FMDEVIDAVLNHAKQGVIK--VYNQYRYDVEKQQALETWENKLKTILAGDKVVDL 439 Query: 386 EYAK 389 + + Sbjct: 440 DQKR 443 >UniRef50_B2TTV9 Site-specific recombinase, phage integrase family n=25 Tax=Proteobacteria RepID=B2TTV9_SHIB3 Length = 439 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 85/407 (20%), Positives = 159/407 (39%), Gaps = 33/407 (8%) Query: 1 MHLLVH-PNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L + + WR +Y+ GK + + +G Y E++L+ AR E +A G D + Sbjct: 48 LYLRYREADKTPTWRFRYKLAGKSRAMLIGSYSELSLSKARETAKELSARVALGYDVAGE 107 Query: 60 KKNDKVE-------QSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNI 112 K+ K E + A E+A E+ H + + ++ ++ +G + Sbjct: 108 KQKHKTEALAKMEAEKNAMRVSELAAEYFERQILPRWKHPDILRRRIDKDINPCIGSMKV 167 Query: 113 AELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA-SC 171 ++K R + +K + G +A + + T I Y ++ ++ NP A A Sbjct: 168 EDVKPRHIDDMLKGIVDRGAPTIATDVLRWTRRIFDYGIKRHALEINPCSAFEVADAGGK 227 Query: 172 NRQHRPALELKRIPELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 L + +L + + G +L L + +R EL ARW E D + + Sbjct: 228 EAARDRWLTRDELIQLFKAMRTAKGFSRQNEITFKLLLALCVRKMELCAARWEEFDLDGA 287 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +W +P ER SK +PL + A+ L+++ F + + Sbjct: 288 VWHLPEER------------SKNGDPIDIPLPSPAVEWLRELHTFSCNSAWVLPARKMQN 335 Query: 291 K---PMSENTVNSALR--VMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 + + E+T+ AL H FR A + L G+ ER ++H Sbjct: 336 RMIPHIQESTLPVALAKVRAEMPDVPNFTIHDFRRTARTHLAALGV-DPVVAERCLNHRI 394 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER---FISPFEYAK 389 + V Y ++ ++ +ER+ L WAD L ++P A Sbjct: 395 KG-VEGIY-NRHQYFDERKAALAQWADLLVALESGKDYNVTPLRRAN 439 >UniRef50_B7UP04 Predicted integrase n=24 Tax=Proteobacteria RepID=B7UP04_ECO27 Length = 405 Score = 300 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 113/389 (29%), Positives = 183/389 (47%), Gaps = 30/389 (7%) Query: 8 NGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKV 65 G W +Y K++ LG YPE+++A+A R+ LA G DP + KK + Sbjct: 35 KGRGKWVFRYVSPVTQKRRNAGLGTYPEVSIAEAARTARIMREQLAAGDDPLEIKKAE-S 93 Query: 66 EQSKARTFKEVAIEWH-GTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAP 123 E+ TF + A H + W + H + L +LE+ F LG + + + D+ Sbjct: 94 EKVVIPTFADAARRVHAELSPGWENPKHVRQWLSTLENYAFPQLGAKTLDSITAADVAET 153 Query: 124 IKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR---QHRPALE 180 ++ V ++ E A+R++QR +M++ G NP + + R +H+PA+ Sbjct: 154 LRPVWLTLS-ETASRVKQRIHVVMQWGWAHGFCVANPVDVVDHLLPQKTRGRDEHQPAMP 212 Query: 181 LKRIPELLTK-IDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 +++P + + + +TR + + +L RS E R RW+EIDF IWTIP ER Sbjct: 213 WRQLPLFVATSVYTDEPYNVTRALLLMVILTATRSGEARGMRWAEIDFHKRIWTIPAER- 271 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 K R H VPLS QA+ IL+ I+ +L+F + +S+ + Sbjct: 272 -----------MKARIQHRVPLSRQAMHILENIRGL--HDELVFPSPR-KQQILSDMVLT 317 Query: 300 SALRVMGYDTKVE---VCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 S LR + + HGFR+ E G +SRD ER ++H +N V AAY H+ Sbjct: 318 SFLRKKKAISDIPGRVATAHGFRSTFRDWCSEQG-YSRDLAERALAHTLKNKVEAAY-HR 375 Query: 357 AEHLEERRLMLQWWADFLDVNRERFISPF 385 + LE+R M+Q WAD++ + F Sbjct: 376 TDLLEQRVPMMQAWADYVMSQFAKNTKEF 404 >UniRef50_Q2NDX8 Site-specfic recombinase, phage integrase family protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NDX8_ERYLH Length = 396 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 107/380 (28%), Positives = 180/380 (47%), Gaps = 27/380 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L+V +G+K W L+ +++GK++ + LG E+ A+AR + EARK++ G DP K Sbjct: 35 LQLVVKASGAKSWILRVQHDGKRRDIGLGPLSEVGPAEAREKAVEARKVIRGGGDPSGLK 94 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + TF+E+A +H +K + H + L +L+ F G++ + + +R Sbjct: 95 SGSGRISGRPPTFRELATSYHDDHKSSWKNAKHREQWLSTLDTYAFPIFGDQPVDRVDSR 154 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYN-PAQEMAGAVASCN--RQH 175 D+L +K + + + E A R+ QR ++ YA G ++ P Q + A+ +H Sbjct: 155 DVLDCLKPIWNA-KPETARRVLQRVLRVLNYAHGMGHREHEAPTQSIRAALGKQRSQVRH 213 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 +L +PEL+ K+++ +G + A+ +L RS E+R A+W+E+D WT+P Sbjct: 214 HASLPYAEMPELMAKLEAASG--VGAMALRFAILTAARSGEVRGAQWNEMDLAKKTWTVP 271 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA-HDLIFIGDHDSHKPMS 294 ER K R H VPLS ALAIL+ K +F +S Sbjct: 272 AER------------MKARRAHAVPLSPAALAILEDAKGLRKKPEGFVFPSSR--GIALS 317 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 + T+ A+R + HG RT E A E ++H N AAY Sbjct: 318 DMTLLKAIRAA---SDQNTTVHGCRTSFRVWAAEKTSCPAAAAEAALAHTIHNKAEAAY- 373 Query: 355 HKAEHLEERRLMLQWWADFL 374 H+ ++L+ RR ++ W FL Sbjct: 374 HRTDYLDIRRQLMADWGAFL 393 >UniRef50_C8PFJ4 DNA integration/recombination/inversion protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PFJ4_9PROT Length = 383 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 96/384 (25%), Positives = 171/384 (44%), Gaps = 38/384 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + + P+G+K++ +Y+ K K + +G E++LA+AR R+ E + Sbjct: 31 LLIKIMPSGAKFFIYEYKQGAKYKRVTIGRAGEMSLAEARQRKSELKT------------ 78 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 +V+ S TF+EV EW T K S + + E L ALG IA++ +D+ Sbjct: 79 ---RVKTSDKITFREVFEEWIKTKSKISPKQLFWINRRFESLLLPALGSMQIADIGRKDI 135 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR--QHRPA 178 + + + + E A ++ ++A+ +D+N ++ A R +H Sbjct: 136 IGALSPLLSDEKQETAKKVLGALNGFYKFALLHEYVDHNIIADIDKATLIGRRQIRHFAY 195 Query: 179 L-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + I L+ + Y G + L +R RFA W EI + +W IP Sbjct: 196 FKDEAEIRNLIKAVKGYFGNERIKVCALFMLYTAVRGENARFATWDEI--KGDMWKIPAS 253 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYG-AHDLIFIGDHDSHKPMSEN 296 + K H V LS+ +L + + IF + +P+S+N Sbjct: 254 K------------MKNGKDHEVFLSSSVRRMLSDYRASSPLQSEFIFPSIKSNVRPISDN 301 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVES---GLWSRDAVERQMSHMARNSVRAAY 353 TV S LR +G+ ++ + HGFR + E + D +E ++H+ +N V+ AY Sbjct: 302 TVRSMLRNLGFSNEM-ITPHGFRATFSTICHEKQDEHGQNSDVIELCLAHVEKNKVKDAY 360 Query: 354 IHKAEHLEERRLMLQWWADFLDVN 377 H A++L++R ++QWW+DFLD Sbjct: 361 NH-AKNLKQRAALMQWWSDFLDGL 383 >UniRef50_B7KUI7 Integrase family protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KUI7_METC4 Length = 414 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 95/403 (23%), Positives = 155/403 (38%), Gaps = 37/403 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V P G K W ++YR GK + L LG YP + LADAR A +A G DP +K Sbjct: 30 LYLVVQPAGGKSWAVRYRAAGKPRKLTLGPYPRLGLADAREAARTALHAVAEGRDPAGEK 89 Query: 61 KNDKVEQSKART--FKEVAIEWHGTNKKWSEDHAHRVLKSLED--NLFAALGERNIAELK 116 + +VE + +T F VA ++ K L + E+++ + Sbjct: 90 QAARVEVAAVQTMRFGAVAADYIERYAKPRNRSWRETESFLTRTLDATDKWQEKDVRAIG 149 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHR 176 +D+ + AV G A RL + V+ G++D +P + S Sbjct: 150 RKDVRDALDAVVARGASIHANRLFAALRRFFAWTVERGILDASPMAGLKP--PSPEISRD 207 Query: 177 PALELKRIPELLTKIDS--YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTI 234 L + + Y P+ +L +L R SE+ A W E D + + WTI Sbjct: 208 RVLTDAELVAVWKAAGEVGYPFGPVV----QLLILTGQRRSEVVEAEWREFDLDGATWTI 263 Query: 235 PPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS 294 P ER +K H+VPL+ QA+ IL+ I L+F Sbjct: 264 PRER------------AKNDRAHVVPLAPQAVKILRCIPCVGTRSRLLF-TTTGETAFSG 310 Query: 295 ENTVNSALRVMGYDTKVE------VCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR-- 346 + L+ + E H R S G+ VE+ ++H++ Sbjct: 311 VSKATDRLQGLSAKHLPEGIEVEPWRLHDLRRTFASGCARLGVA-VHVVEKALNHVSGTH 369 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER--FISPFEY 387 + + Y + + +ERR ++ WA LD + E Sbjct: 370 SGIVGVY-QRHSYGDERRCAMELWAAHLDGLVGGAAKVVKLER 411 >UniRef50_Q0BR52 DNA integration/recombination/inversion protein n=6 Tax=Alphaproteobacteria RepID=Q0BR52_GRABC Length = 380 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 126/371 (33%), Positives = 203/371 (54%), Gaps = 33/371 (8%) Query: 15 LQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQSKARTFK 74 ++YRY GK+K+L+ G YP ++LA+AR+RR +A+ +L G DPG K TF+ Sbjct: 1 MKYRYGGKEKLLSFGAYPGVSLAEARLRRAKAKVVLGEGGDPGAGNK-----PRTQMTFE 55 Query: 75 EVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRL 133 E A +WHG HA R+L LE + F LG+ ++ + D+LA ++ VE G L Sbjct: 56 EAARKWHGHRLDALDAGHATRLLTRLERDAFPVLGKLGLSVITPTDVLAMVRRVEARGAL 115 Query: 134 EVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAV-ASCNRQHRPALELKRIPELLTKID 192 +V+ RL+Q + I R+A+ G + +PA+ + + +H P + +P L+ ID Sbjct: 116 DVSRRLKQHVSQIYRFAIAHGWAERDPAEHLGQLLKPKPRTRHMPRIGRSELPALIRAID 175 Query: 193 SYTG------RPLTRWAIELTLLIFIRSSELRFARWSEI-DFEAS--IWTIPPEREPIPG 243 Y G R +TR A+ TLL ++R++E R ARW E D + + +W +P ER Sbjct: 176 GYDGEETPRRRAVTRAALLFTLLTWVRTNETRHARWEEFEDLDGASPVWRVPAER----- 230 Query: 244 VKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALR 303 KM H+VPL+ +A+L++++ + A D +F+G+ +P+S+NT+ A Sbjct: 231 -------MKMVREHVVPLAPAVVALLQEVRVYSLA-DYVFVGEK-PDQPISQNTMIYACY 281 Query: 304 VMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEER 363 MGY HGFR +A + E+ + D +E ++H+ R+ VR AY + A +L R Sbjct: 282 RMGYRG--RQTVHGFRGLASTWANEAECYQPDWIEMALAHVERDEVRGAY-NAALYLSPR 338 Query: 364 RLMLQWWADFL 374 R ML+ WA F+ Sbjct: 339 RRMLEDWAGFI 349 >UniRef50_A3M8T8 Phage integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=A3M8T8_ACIBT Length = 425 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 110/403 (27%), Positives = 175/403 (43%), Gaps = 28/403 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V P+G K W ++ K+ + G YP I+LA+AR R LLA G++P + Sbjct: 25 LYIEVRPSGKKVWIHKFSLNKKEGSITYGEYPSISLAEARYYHARDRALLAKGINPVAHR 84 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 +++ TFK+ EW +K SED+ + L+ +++ +G + ++ + Sbjct: 85 NETARLALETEQETFKKYGDEWKEKHKIDKSEDYKKLIEYGLKTDIYPVIGHLHPKDVTS 144 Query: 118 RDLLAPIKAVEMSGRL-------------EVAARLQQRTTAIMRYAVQSGLIDYNPAQEM 164 + +L I R A + IMR + GL + +P + Sbjct: 145 KHVLLIINNTMERIRTSTRSQKLKPSTGETTAIVNKTFIGMIMRSCIMKGLAEVDPTYAV 204 Query: 165 AGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE 224 G + H L +K I EL +I Y G TR A+ +R+ E+R W+ Sbjct: 205 KGVIKRQKINHARPLSMKEIRELKERIPLYNGAQTTRNALNFLFYTMLRTIEVRRLEWAW 264 Query: 225 IDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI 284 +D+E T P + R K HL+PLS QA +ILK+ +F Sbjct: 265 VDWENKTITFPE--RTFQEIIEGKRAMKNNKIHLLPLSDQAFSILKEQYTITAKCQFVFS 322 Query: 285 GD-----HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVER 339 K + +T+N AL + + +V H R A + L E G R +E+ Sbjct: 323 SPMQLTLGKPEKMLGRSTLNFALDALKMN---DVSPHDARATASTYLNELGSDDR-WIEK 378 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFI 382 Q+SH + RA Y H A+ L RR MLQW+ADFLD E + Sbjct: 379 QLSHTDNDKTRATYNH-AKWLRNRRSMLQWYADFLDGKAEMPV 420 >UniRef50_B3AX37 Site-specific recombinase, phage integrase family n=7 Tax=Enterobacteriaceae RepID=B3AX37_ECO57 Length = 440 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 82/394 (20%), Positives = 152/394 (38%), Gaps = 32/394 (8%) Query: 13 WRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVE------ 66 WR +Y++ GKQ+ + +G Y E++L+ AR E +A G D +K+ K E Sbjct: 61 WRFRYKFAGKQRAMVIGSYAELSLSRARETAKELSARVALGYDVAAEKQERKAEALAKME 120 Query: 67 -QSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIK 125 + A E+A E+ H + + ++ ++ +G ++K R + +K Sbjct: 121 AEKNAIRVSELAAEYFERQILPRWKHPDILRRRIDKDINPRIGHMKAEDVKPRHIDEMLK 180 Query: 126 AVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA-GAVASCNRQHRPALELKRI 184 A+ G +A + + T I Y ++ +++ NP L + + Sbjct: 181 AIVDRGAPTIATDVLRWTRRIFDYGIKRHVLEINPCSAFEVSDAGGKESSRDRWLTREEL 240 Query: 185 PELLTKIDSYTG-RPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPG 243 + + G +L L + +R EL ARW E D + ++W +P ER Sbjct: 241 IRFFQAMRTAKGFSRQNELTFKLLLALCVRKMELCAARWEEFDLDNAVWHLPEER----- 295 Query: 244 VKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK---PMSENTVNS 300 SK +PL + LK+++ + H+ + E+T+ Sbjct: 296 -------SKNGDPIDIPLVPPVIEWLKELRVLSCNSAWVLPARKMQHRMIPHIQESTLPV 348 Query: 301 ALR--VMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAE 358 AL + H FR A + L G+ ER ++H + V Y ++ + Sbjct: 349 ALAKVRAEMPEVPDFTIHDFRRTARTHLAALGV-DPVVAERCLNHRIKG-VEGIY-NRYQ 405 Query: 359 HLEERRLMLQWWADFLDVNRER---FISPFEYAK 389 + +ER L W + L ++P AK Sbjct: 406 YFDERTSALAKWTNLLVSLERGERYNVTPIRRAK 439 >UniRef50_Q7MPT5 Site-specific recombinase, phage integrase family n=14 Tax=Gammaproteobacteria RepID=Q7MPT5_VIBVY Length = 434 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 92/408 (22%), Positives = 163/408 (39%), Gaps = 39/408 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++ V GS YW ++Y ++ LG +P ++LADAR+ RK + +G+DP +K Sbjct: 44 LYFCVRKQGSPYWMIRYTTAKGRREATLGQFPLMSLADARIAAAYFRKEVRDGIDPLLEK 103 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + K+E T ++ +W+ T+ H + ++ +G + IAE+ RD+ Sbjct: 104 Q--KIELPDIETVDQLFHDWYRTDLSRRLKHPKIPYRVYTKDISPVIGIKCIAEVTARDV 161 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA-GAVASCNRQHRPAL 179 ++ + S R +A + R+A++ L NPA L Sbjct: 162 REVLERIRESNRPTIANDTLMYMKQLFRHAIKLDLTLNNPAAAFTVDDAGGVESSKDRML 221 Query: 180 ELKRIPELLTKIDSY--TGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 + I + ++ + A L L++ +R SEL A W E+D +W +P E Sbjct: 222 SKEEIHYAFSVFHTHINSFGRDNYLACCLFLVLGVRKSELCEAMWREMDLTTGVWDLPKE 281 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP-MSEN 296 R SK +PL QA+A +++ +F SH+P M + Sbjct: 282 R------------SKTGVPISIPLPRQAIAWFNELQIRACGSPYVFPARRASHRPHMGPD 329 Query: 297 TVNSALRVM-------------GYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSH 343 T+N A+ + H R S G+ + ER ++H Sbjct: 330 TLNRAISKLFGREPGRKKQPPNKMGKLEHFTVHDLRRTFRSLAASLGIA-GNVAERCLNH 388 Query: 344 MARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYAKIN 391 + V Y + ++ EERR+ Q AD ++ + FE A + Sbjct: 389 KLKG-VEGIY-DRHDYFEERRIAHQTVADVVE-----PLVNFEPASQH 429 >UniRef50_Q1QAC1 Phage integrase n=2 Tax=Psychrobacter RepID=Q1QAC1_PSYCK Length = 448 Score = 297 bits (760), Expect = 7e-79, Method: Composition-based stats. Identities = 107/393 (27%), Positives = 181/393 (46%), Gaps = 25/393 (6%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L+V P +K W +Y KQ ++++G+YP I+ A A E LL+ G+DP Sbjct: 32 LFLMVRPTETKSWMYRYYPPSNPKQSIISIGIYPSISYARACEVWREYEDLLSKGIDPKI 91 Query: 59 KKKNDKVE--QSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 +++ K +F A E+ T + + R LE + + +G I+E+ Sbjct: 92 HREDIKKSFISKTKNSFNHFAWEYFDTLEQSQKGNTLIRKKGRLEL-ICSYIGNEPISEI 150 Query: 116 KTRDLLAPIKAVEMSG------RLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA 169 + +L + ++ + A R + + YA G NPA + +A Sbjct: 151 GSPRMLEVLLDIQAKSLNKDDKPTDKAERCAGIASDVFVYANARGFCSSNPAALIKSQLA 210 Query: 170 SCNRQHRPALE-LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 + HRPA+ K + +LL I++ G P T ++ L L+F+R+ +LR W ++D E Sbjct: 211 KSSYGHRPAVTKPKDLAKLLRAIETIEGDPNTINSLRLLALLFVRNGDLRRMCWIDLDLE 270 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH- 287 A W + P + M +VPL QA+AIL++ ++ G +F Sbjct: 271 AGRWRLKPLKGQGKVN--------MVKDMVVPLPRQAVAILREQQKINGHTKYVFFSQTA 322 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 H+ +S+ T N L+ +GY K C HGFR A + L E + VE + H ++ Sbjct: 323 KKHQIISDATANKRLKDLGY--KDIHCAHGFRATAKTILQEQLKYPLVLVEMALGHTTKD 380 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 AY + E++++R M+Q WAD+LD RE Sbjct: 381 PNGTAYG-RFEYIDDRSDMMQKWADYLDALREG 412 >UniRef50_C7I5J5 Integrase family protein n=2 Tax=Thiomonas intermedia K12 RepID=C7I5J5_THIIN Length = 401 Score = 296 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 107/385 (27%), Positives = 179/385 (46%), Gaps = 35/385 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V GS W +Y GK +LG +TLADA + E R + G D + Sbjct: 27 LYLRVR-GGSALWTFRYMVAGKASEQSLGPISALTLADALAKAAEVRAKIRRGED-FALR 84 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + V + + TF+EVA++ + K + HA + + +L F G + ++E+ T Sbjct: 85 PSATVVPTPSDTFEEVALQLWESMKPGWKNPKHADQWINTLRMYAFPRFGRKAVSEIGTE 144 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE-------MAGAVAS 170 ++LA + + + + E A RL+QR A++ A GL NPA + Sbjct: 145 EVLAALTPIWQT-KHETATRLRQRIEAVLSAAKARGLRAGENPAAWRGHLNALLPTISKK 203 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 +H A++ + +P + ++ ++ WA++ T+L +R+ + WSEID E Sbjct: 204 RRVKHFEAMDWREVPAFMAQLRQRAN--MSAWALQFTILTALRTGTVIGTPWSEIDLERR 261 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 +W IP ER K + H VPLS QA+ +L+ + + G D +F G Sbjct: 262 LWVIPAER------------MKAQVEHRVPLSRQAVELLQALPRQEG-SDWVFWGARKPT 308 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 +S + LR M + + HGFR+ ES + VE ++HM N V Sbjct: 309 --ISNMAMLELLRGM----RPGLTVHGFRSSFSDWAAESTHFPSQTVEMALAHMITNQVE 362 Query: 351 AAYIHKAEHLEERRLMLQWWADFLD 375 AAY + + +E+RR ++Q W D+LD Sbjct: 363 AAY-RRGDLIEKRRELMQAWGDYLD 386 >UniRef50_B0SXU9 Integrase family protein n=6 Tax=Proteobacteria RepID=B0SXU9_CAUSK Length = 399 Score = 296 bits (759), Expect = 8e-79, Method: Composition-based stats. Identities = 102/398 (25%), Positives = 171/398 (42%), Gaps = 37/398 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + G + W Y K+ L LG +++LA+ARV R +LA+G+DP ++ Sbjct: 28 LYLSIDDGGRRRWVFIYTRGAKRTELGLGGGRDLSLANARVEAAAFRTMLADGLDPKVER 87 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 D +A+TF A + + +E HA + +L + ER + EL T+ Sbjct: 88 ARD----DQAQTFGACADAYVEAMRPSWRNEKHAAQWKMTLTKYAAP-IRERPVKELTTQ 142 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE---MAGAVASCN-- 172 D+L ++ + E A RL+ R ++ A GL NPA+ + + Sbjct: 143 DILDVLQPLWTR-TPETAERLRGRMENVLDAAKAKGLRTGENPARWRGHLNQLLPKRQRL 201 Query: 173 -RQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 R H AL IP+ + + + + A+E +L RS E+ A W+E D + + Sbjct: 202 ARGHHAALAYDLIPDFMANLRTR--SAVAARALEFAILTASRSGEVLGATWNEFDLDKKV 259 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 W IP R K H VPLS +A+ I + QF +F G K Sbjct: 260 WVIPATR------------MKAGREHRVPLSARAMEIAEA--QFDDGKGYVFAGPK-LGK 304 Query: 292 PMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 P+S + LR M K ++ HGFR+ E+ +S + E ++H N A Sbjct: 305 PLSSMAMAMLLRRM----KSDITVHGFRSSFRDWASETTGFSHEVCEMALAHTIANKAEA 360 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYAK 389 AY + + ++RR +++ WA + + + A Sbjct: 361 AY-RRGDLFDKRRKLMEAWAGYCATQKADQVVQLRRAS 397 >UniRef50_UPI0000F2F6E4 putative integrase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=UPI0000F2F6E4 Length = 353 Score = 295 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 139/346 (40%), Positives = 202/346 (58%), Gaps = 7/346 (2%) Query: 49 LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWHGTN---KKWSEDHAHRVLKSLEDNLFA 105 ++A GVDP ++ +++ T + V W K SED ++ L+ E++LF Sbjct: 1 MIAEGVDPKEQLSILLAKKNNVNTLENVVRVWLDAYAVRKPLSEDTKNKQLRKFENHLFP 60 Query: 106 ALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA 165 ++ I ++ RDL + + + A R++ + YAVQ I N A+++ Sbjct: 61 KFKDKAIEQITLRDLKDALNVIYD-HSPDNAQRIRASLIQVYSYAVQHSYIQTNIARDLE 119 Query: 166 GAVASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE 224 S + HR L IP+L+ +I + +G PLT+ + L L F+RSSE+RFARW+E Sbjct: 120 DMDLSARKNHRATFRSLDLIPQLIRRIKADSGNPLTKLCLLLGLHTFLRSSEIRFARWNE 179 Query: 225 IDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI 284 IDFEA IW IPP R I GVKHS RG+KM+ HLVPLS Q++ IL+++ Q+ G D +F Sbjct: 180 IDFEAEIWRIPPRRRLIEGVKHSDRGAKMKEEHLVPLSKQSIEILEKVYQYSGDCDFVFP 239 Query: 285 GDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM 344 ++ +SENT N ALR MGY TK E+ HGFR +A S+L E ++SRDA+E+QMSH Sbjct: 240 SLNNKRIFISENTPNDALRRMGY-TKEEISFHGFRALARSALGEMSIFSRDALEKQMSHQ 298 Query: 345 ARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER-FISPFEYAK 389 RN AY H AE+LEER ++Q W+D+L +ISP EY + Sbjct: 299 ERNETVGAYTHIAEYLEEREKIMQIWSDWLSAIENGDYISPHEYGR 344 >UniRef50_C9M6R5 Site-specific recombinase, phage integrase family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6R5_9BACT Length = 393 Score = 295 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 113/393 (28%), Positives = 179/393 (45%), Gaps = 30/393 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV PNG K W ++Y + K L +G YP + LA+AR RDE + D + Sbjct: 25 LYLLVCPNGRKVWTVRYWIDKKLHQLTIGDYPMMGLAEARAERDEIK---------NDAR 75 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 KV TF E A EW+ K+ + + L L L R + E+ ++ Sbjct: 76 YEKKVAAPMGLTFGEFAREWYEKRKRPKLSKSAQALYDLRFRYLDPLMARPLTEITREEI 135 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA-L 179 + + + E R + +M YA+ + I Y+P+ ++ + + PA Sbjct: 136 VDTLHKLSEQHPAETVRRTGGIVSMVMGYALATRKIPYDPSSQLGLELPIHVSKPMPAAT 195 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 I L+ ++S + R AI+L F+RS E ARW EID + +W++P E Sbjct: 196 HASEIGVLMRALESID-SLVLRSAIQLIAYTFVRSGEACLARWDEIDLKEGLWSVPAEH- 253 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVN 299 +K + HLVPLS QA+ IL +++ +G IF + K + +T++ Sbjct: 254 -----------TKTKLDHLVPLSRQAVMILDTLRRRFGGKGHIFPS-RNRGKLVIPSTLS 301 Query: 300 SALRVMGYDTKV----EVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIH 355 + + HGFR A + L E W+RD +E Q+ H RN R AY + Sbjct: 302 REMVKLQSLPLEARPIPTVVHGFRATASTVLNEH-QWNRDVIEAQLGHFERNKSRRAY-N 359 Query: 356 KAEHLEERRLMLQWWADFLDVNRERFISPFEYA 388 +AE+L R M+QW+AD+LD R+ P Sbjct: 360 RAEYLPIRISMMQWYADYLDALRDGRPKPERPK 392 >UniRef50_C7JAN4 Phage integrase n=17 Tax=Acetobacteraceae RepID=C7JAN4_ACEP3 Length = 404 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 104/387 (26%), Positives = 180/387 (46%), Gaps = 35/387 (9%) Query: 4 LVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKK 61 LV +K W ++ ++ + LG +++LA+ R + EAR L+A G+DP D+++ Sbjct: 30 LVAQGAAKSWFFRFTSPISNTRREMGLGSVHDLSLAEVRRKATEARHLVAAGLDPIDERR 89 Query: 62 NDKVEQSKA--RTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 K ++ K TF ++A + + + SLE ++F A+G + ++E++T Sbjct: 90 KLKAQRKKESGLTFSDIAKRYVKEMAPGWRNARSSTVWTSSLERHVFPAMGGKLVSEIET 149 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE-------MAGAVA 169 D+LA ++ + + E A R++ R I+ +A G D NPA+ + A Sbjct: 150 EDVLAVLRPIWKT-TTETADRVRGRIERILDFARTHGWRDGENPARWRGHLANILPKPSA 208 Query: 170 SCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 +H PA+ K I +++ K+ G ++ A+ L RS E+R A WSEID Sbjct: 209 VAKARHLPAVNRKDIGKVMAKLAQAEG--ISPKAVRFACLTAARSGEVRQAVWSEIDLVT 266 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA--HDLIFIGDH 287 IWTIP + K H VPLS A+A+L+++ F DL+F G Sbjct: 267 KIWTIPAHK------------MKAGKEHRVPLSAGAIAVLQEVLPFRDKRAGDLVFPG-G 313 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 +P+S+ ++ AL +V HG R+ E + + E ++H + Sbjct: 314 KRGRPLSDVVLSKALHSA--AGTKDVTVHGLRSTFRDWAAEETDYPGEVAEMALAHTISD 371 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFL 374 V AAY + + +RR M+ W D + Sbjct: 372 KVEAAY-RRGDLFNKRREMMTAWNDKM 397 >UniRef50_B5J8B6 Site-specific recombinase, phage integrase family protein n=2 Tax=Rhodobacteraceae RepID=B5J8B6_9RHOB Length = 436 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 94/397 (23%), Positives = 170/397 (42%), Gaps = 43/397 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGK--------QKMLALGVYPEITLADARVRRDEARKLLAN 52 ++L+V P+G++ W ++ +G+ + LG +T+ AR R E R++ Sbjct: 65 LYLVVDPSGARRWIVRVVVKGQKNKKGAPLRTDFGLGGADIVTINQARDRALEYRRMAKQ 124 Query: 53 GVDPGDKKKNDKVEQSKARTFKEVAIE-WHGTNKKWS-EDHAHRVLKSLEDNLFAALGER 110 G++P Q TF+E A + W H + + +L D F +G Sbjct: 125 GLNPRF------NAQRDIPTFEEFAQQVHIERMPTWKNAKHGQQWINTLRDYAFPKIGRM 178 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQEMAG--- 166 + + +++ + + + + E A RL QR ++ A G NP + Sbjct: 179 PVDSIDQPEVMMCLSPIW-TEKHETARRLAQRIKTVLDVARSKGFRSGENPVTAIKDAQA 237 Query: 167 -AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI 225 +H A+ + +P T + + ++ A+ T L R+SE+ RW EI Sbjct: 238 LPKVKTKPKHHKAMHWRDVPAFYTDLKTRNA--MSANALRFTCLTGSRTSEVLGMRWEEI 295 Query: 226 DFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG 285 DF+A +WT P ER K H VPL+ + L+I++ +K D +F G Sbjct: 296 DFDARLWTCPIER------------MKTGEVHRVPLTDEMLSIIEPLKAL--KSDYVFEG 341 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 HKP+S ++ LR M + V HGFR+ E R+ E +SH Sbjct: 342 QK-RHKPLSNMSMLMLLRRMDVEG---VTVHGFRSTFRDWASEVASAPREIAEMSLSHRV 397 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFI 382 + V AY +++ +E+RR +++ W+ ++ + + Sbjct: 398 GSDVERAYA-RSDLIEKRRALMKRWSMYVAGESGQIV 433 >UniRef50_A7ZG37 Symbiosis island integrase n=3 Tax=Campylobacter RepID=A7ZG37_CAMC1 Length = 406 Score = 294 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 111/397 (27%), Positives = 194/397 (48%), Gaps = 38/397 (9%) Query: 1 MHLLVHPNG---SKYWRLQYR-YEGKQ--KMLALGVYPEITLADARVRRDEARKLLANGV 54 +++L + +K + +Y+ K+ K + +G YP ITLA+AR + E +L G Sbjct: 31 LYVLAYKTQKETTKTFYFKYQESNQKRTTKQIKIGKYPSITLAEARAKALELERLRDRGE 90 Query: 55 DPGDKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAE 114 D K TFK+VA EW + ++ + +E NL LG++ I E Sbjct: 91 DLQTATAKQKT-----ITFKDVADEWIDKEQSKELIAFNKQIGRIEKNLIPYLGDKAITE 145 Query: 115 LKTRDLLAPIKAVEMSGR-----LEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM--AGA 167 LK RD I+ ++ E + R + I+ AV G I++NP +++ A Sbjct: 146 LKRRDYAHAIEQIQAREAKRGITHETSLRTFRLLRKILDLAVNKGYIEHNPTRDIIFNDA 205 Query: 168 VASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 + H A+ E K++ ELL + Y G T+ A+ + F+RS+ +R +W +D Sbjct: 206 FKTSTNNHFKAITEPKKLKELLGAMQDYQGSFYTQQALIFGVHTFLRSANVRGLKWQYVD 265 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 FE ++ T P E K+R +P+S Q +LK + + + D +F Sbjct: 266 FENNLITFPAE------------AMKLREVFYMPMSKQVKKLLKTMLE-HKRGDFVFPSG 312 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVE---SGLWSRDAVERQMSH 343 + +P+S++T+N A++ +G+ E+ HG RT A + L E + +S D +E + H Sbjct: 313 ISATRPLSDSTLNQAIKRLGFG--DEMVFHGLRTTASTLLNENIKNHGFSSDVIELCLDH 370 Query: 344 MARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 R+SV+A Y +++ L+ER ++QWW+D+LD + Sbjct: 371 KERSSVKAIY-DRSQRLDERAKLMQWWSDYLDSLVKE 406 >UniRef50_A4SXW8 Phage integrase family protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SXW8_POLSQ Length = 434 Score = 293 bits (751), Expect = 7e-78, Method: Composition-based stats. Identities = 99/412 (24%), Positives = 178/412 (43%), Gaps = 49/412 (11%) Query: 1 MHLLVHP---NGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVD 55 +++ V N + W +Y K++ + LG +LADAR + E R+L+ +G+D Sbjct: 31 LYIQVSKGVNNFKRSWIFRYTSPTLFKRREMGLGSLEARSLADARRKTLELRQLVMDGID 90 Query: 56 PGDKKKNDKVEQ----SKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGE 109 P + + K ++ + TFKE A K S HA + ++ + +GE Sbjct: 91 PTEDRCKAKSKRITAINNGITFKEAAERCIEGRKAEWKSSKHADQWRNTISTFAYPEIGE 150 Query: 110 RNIAELKTRDLLAPI-KAVEMSG----------RLEVAARLQQRTTAIMRYAVQSGLID- 157 + ++ T + + + ++ R E A R++QR I + I Sbjct: 151 LRVDQINTSHIAKLLEQEIKNKNGTVEGTFWNVRTETATRVRQRIEVIFDWCKAHEYIKG 210 Query: 158 YNPAQE-------MAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLI 210 NPA+ + A + H PAL +RI E + + + G + A+EL +L Sbjct: 211 DNPARLKGALGHLLPKAKKIQKKSHHPALPFQRIGEFVKDLREHNGY--SALALELLILT 268 Query: 211 FIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILK 270 R+SE+ A+W+E + E +W IP R K H VPL+T+A+ IL+ Sbjct: 269 ATRTSEVIEAKWTEFNLETKVWVIPAAR------------MKAGKEHRVPLNTRAMEILE 316 Query: 271 QIKQFYGAHDLIFIGD-HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVES 329 +K + +F G H +S + S +R M + HGFR+ E+ Sbjct: 317 HLKTISVSS-YLFPGSLHKEESHLSNMALLSMMRKMPKYSG--YVPHGFRSTFRDWAAET 373 Query: 330 GLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 + + VE ++H +N AAY + + LE+R ++++ W ++ + Sbjct: 374 TDYPNETVELALAHTIKNKAEAAY-RRQDQLEKRTVLMEEWGAIVNAAINKN 424 >UniRef50_D2LD60 Integrase family protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD60_RHOVA Length = 427 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 95/395 (24%), Positives = 148/395 (37%), Gaps = 32/395 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++ + P+G+K W ++YR G+ + L LG YP I L AR A +A G DP K Sbjct: 30 LYFVHQPSGAKSWAVRYRVGGQTRKLTLGTYPAIGLKPARDLASTALAAVARGEDPAKAK 89 Query: 61 KNDKVEQSKA---RTFKEVAIEWHGTN--KKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K K ++ A + VA + + +K E H + L+ + R + ++ Sbjct: 90 KAAKEKEKAAPARDFVEAVAASFIERHSKQKNKETHIRETERILQREIVPVWKGRKLGDI 149 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 D+ + A+ G +A R + +AV I +P + + + Sbjct: 150 TRADVHEVLDAIVNRGCPTMANRTLSTVRKMCAWAVDRSFIAVSPCHGIKA--PASEKSR 207 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 L + + TG P A +L L R E+ RWSEIDF+ IWTIP Sbjct: 208 DRLLSEDEMRAAWLAFE-ATGWPFGPLA-KLLLATAQRRDEVADMRWSEIDFKTRIWTIP 265 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMS- 294 R SK H VPLS ALAIL + G D +F P+S Sbjct: 266 AAR------------SKNGQAHEVPLSEAALAILDGLPHVAGVSDYVF--TTTGKTPVSG 311 Query: 295 ----ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN--S 348 + + + + H R A S + V+ ++H + Sbjct: 312 FSRAKKAFDEQITRQLGEGIPGWTLHDLRRTAASGMTALK-SPPHVVDAVLNHKSGTIKG 370 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVNRERFIS 383 V A Y+ + + E+R L W FL Sbjct: 371 VSAVYM-RYGYAAEKRTALDAWGHFLTTIISSNTP 404 >UniRef50_D1Y3S1 Site-specific recombinase, phage integrase family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3S1_9BACT Length = 433 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 115/403 (28%), Positives = 196/403 (48%), Gaps = 47/403 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEG-KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK 59 ++L V PNG K W +YR EG +++ + LG YP + +A AR R++ R + G P D Sbjct: 26 LYLKVCPNGRKVWLYRYRDEGERERKVTLGEYPALDMAAARERKEATRARILRGEAPQD- 84 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKW--SEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + TF++VA W+ KK + + + + LE L LG R + +++ Sbjct: 85 --------TALLTFEQVARRWYEKQKKRGLAPRYLETIRQRLECYLIPPLGARPLEQIQR 136 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYN---PAQEMAGAVASCNRQ 174 +L+A ++ V G +E + R+ + I +YA +G++ A ++ + + Sbjct: 137 AELVAVVEGVAKRGIVESSHRVGVILSQIYQYAEDAGILPGGGALAAASLSRVLPKTKTE 196 Query: 175 HRPALE-LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 H + + + +++ I Y G ++R +E L F+RS E R ARW EID EA +WT Sbjct: 197 HFATVSKPEDVRQVMECIRDYRGFAVSRC-LEFIALTFVRSGEARRARWREIDLEARLWT 255 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD--LIFIG----DH 287 IP E K R H VPLS QALA+L+++K + LIF+ Sbjct: 256 IPAEH------------MKRRIAHKVPLSRQALALLEEMKPLSCSGPESLIFVSGLTGRS 303 Query: 288 DSHKPMSENTVNS----ALRV------MGYDTKVEVCGHGFRTMACSSLVESGLWSRDAV 337 S +++ ++ AL+ G ++ HG R+MA + L E + + Sbjct: 304 SSSGILTDMSLLRPFREALKRNPERAAAGLKPFPKMTVHGLRSMASTILNEE-RQGGELI 362 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 E Q+SH+ + +R Y + +E L++RR ++Q+WAD+LD Sbjct: 363 EIQLSHLDADRIRLIYNN-SELLDDRRALMQFWADWLDNCTRN 404 >UniRef50_A1TXN0 Phage integrase family protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1TXN0_MARAV Length = 396 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 86/404 (21%), Positives = 157/404 (38%), Gaps = 39/404 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + + G+K W ++R+ GKQ ++LG YP +L +AR +A LLA G++P Sbjct: 9 LAIRISIRGTKTWFYRFRFRGKQDAVSLGRYPTTSLLEARDVHGDACALLAKGINPKKAF 68 Query: 61 KNDKVEQSKARTFKEVAIEWH---------GTNKKWSEDHAHRVLKSLEDNLFAALGERN 111 K K + T +E+ +W T + SE + L LG+ Sbjct: 69 KESKKVAEQTWTGQELFDDWIRVYSSTPSTRTKRTPSEQVVRQTTWRWNKYLRRTLGQIL 128 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC 171 I + + + I AV E A + + AV GLID NP + + Sbjct: 129 IPTITKQVAASLISAVSELNSREQARKCLTILNGMFGLAVAKGLIDENPCYGLQPSKLGA 188 Query: 172 NR--QHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 ++ L + ++ + R A++ LL +R E+ A+WS+IDF Sbjct: 189 SKGSPRSRVLTPSEMKRFWEALEDSSLDTSVRAALKAILLTGLRRGEICQAKWSDIDFNT 248 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 ++W +PPE +K R H VP+ST +L+ + +F Sbjct: 249 NVWNLPPE------------ITKSRRKHTVPISTALKNLLQSLDM---DGTYVFRSTRAP 293 Query: 290 HKPMSENTVNSALRVMGYD------------TKVEVCGHGFRTMACSSLVESGLWSRDAV 337 +P+ N++ +A+ + H R + L E + Sbjct: 294 WQPIGSNSLTTAIARLQGIKTQQVNEKAPLFGLERFSVHDLRRTVATGLGEYCETPPHVI 353 Query: 338 ERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 R ++H++ + + Y +A +E+ L+ W+ ++ E Sbjct: 354 RRILNHLSDDRLEDIY-QRATLFDEQAKALERWSTWVMETIEEE 396 >UniRef50_Q74H29 Integrative genetic element Gsu32, integrase n=1 Tax=Geobacter sulfurreducens RepID=Q74H29_GEOSL Length = 439 Score = 291 bits (745), Expect = 3e-77, Method: Composition-based stats. Identities = 88/419 (21%), Positives = 158/419 (37%), Gaps = 54/419 (12%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 + V P+G++ + Y ++GK++ L LG YP+++LADAR + +A A G+DP + Sbjct: 33 VRVFPSGARSFFYMYHFDGKRRFLNLGKYPQLSLADARQKHRDAVSQHAKGIDPLAATQE 92 Query: 63 DKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 K E+ +A T ++ E+ K E A ++L ++ G+R ++K D Sbjct: 93 QKRERREAITVADLIDEYVKNWAKVYKVERSATEDERALSKDVLPYWGKRKAKDIKRTDA 152 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC-NRQHRPAL 179 +A ++ + G A + + + +A++ ++ NP ++ AV + R L Sbjct: 153 IALLERIVRRGSPGQARNILKVGRKMYEFAIERKYVEANPFSRISKAVPATMPRTRSRVL 212 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 I + + ID G T+ A++L L+ R E+ EID E WTIPPER Sbjct: 213 TESEIKYIWSAIDKSAGSDETKRALKLILVTAQRPGEVIGMHRREIDGE--WWTIPPERI 270 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH--------- 290 + H V LS AL ++ IF Sbjct: 271 KTEKDRTRSNSV-GPQPHRVYLSPLALELI------GDKDGYIFESPRGGAMDSKALSHV 323 Query: 291 -----------------------KPMSENTVNSALR-------VMGYDTKVEVCGHGFRT 320 P++ + L Y H R Sbjct: 324 VHAAPLVPELVRDTEGHVFAGPCGPVAAKALMQLLEKEIAYPDKEKYYGLTRWTPHDLRR 383 Query: 321 MACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 A + + + +R ER ++H ++ Y + +++ L WA +L+ Sbjct: 384 TARTRMSAINIPTRH-AERVLNHTLPG-IQKTY-DLYRYDPQKKAALTKWAAYLEELLR 439 >UniRef50_A9HQA6 Phage-related integrase n=5 Tax=Rhodobacteraceae RepID=A9HQA6_9RHOB Length = 398 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 88/389 (22%), Positives = 167/389 (42%), Gaps = 43/389 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGK--------QKMLALGVYPEITLADARVRRDEARKLLAN 52 ++L+V P+G++ W ++ +G+ + LG +T+ AR R E R++ Sbjct: 26 LYLVVDPSGARRWIVRVVVKGQKNKKGAPLRTDFGLGGADIVTINQARERALEYRRMAKT 85 Query: 53 GVDPGDKKKNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGER 110 G++P K + TF+E A + H + H + + +L D F +G Sbjct: 86 GLNPRFNAKRE------IPTFEEFAKQVHIDRLPTWKNAKHGQQWINTLRDYAFPKIGRM 139 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQEMAG--- 166 I + +++ + + + + E A RL QR ++ A G D NP + Sbjct: 140 PIDSVNQPEVMMCLAPIW-TAKHETAKRLAQRIKTVLDVARSKGFRDGENPVTAIKEAHA 198 Query: 167 -AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI 225 H A+ + +P + + ++ A+ T L R+ E+ +W EI Sbjct: 199 LPKVKGKVNHHKAMHWRDVPAFYSDLRGRNA--MSAKALMFTCLTGSRTGEVLGTQWGEI 256 Query: 226 DFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG 285 D +A +WT P R K H VPL+ + L+I++ ++ D +F G Sbjct: 257 DLDARVWTCPAIR------------MKTGEDHRVPLTDEMLSIIEPLRAMQ--SDYVFEG 302 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 H+P+S ++ LR M + V HGFR+ + R+ E +SH+ Sbjct: 303 QK-RHRPLSNMSMLMLLRRMQVEG---VTVHGFRSTFRDWASDVANAPREVSEMSLSHLV 358 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFL 374 + V AY +++ L+ RR +++ W++++ Sbjct: 359 GSDVERAYA-RSDLLDRRRALMERWSNYV 386 >UniRef50_A1WQF8 Phage integrase family protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQF8_VEREI Length = 419 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 85/382 (22%), Positives = 163/382 (42%), Gaps = 28/382 (7%) Query: 8 NGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKVEQ 67 G W L+YR+ G + LG YP+++L DAR + R + GVD +K+ ++++ Sbjct: 40 KGQASWILRYRFGGGAREKVLGRYPDLSLKDAREATRQNRARIQQGVDVAAEKRAERLKA 99 Query: 68 SKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAV 127 + +A W+ + + H VL+ + ++ A+G+ + E++ + + + Sbjct: 100 HEQVAVAALAQAWYDRHIAKTYKHPEVVLRVIRRHIEPAIGKLGVTEVRPLHIDKVLTRI 159 Query: 128 EMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASC-NRQHRPALELKRIPE 186 +G VA + + +AV+ ID NP + A + L + + Sbjct: 160 LDAGTPTVANDALRHLFRMFHFAVKRRWIDANPVSGFEISDAGGFEVSRQRWLNREELAA 219 Query: 187 LLTKI-DSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVK 245 + D+ A+ L L + +R EL ARW+E D E +W++ P R Sbjct: 220 FAKAMQDTPNFGRQNELAVWLLLALCVRKMELLSARWTEFDLERGVWSLHPSR------- 272 Query: 246 HSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFI-----------GDHDSHKPMS 294 +KM + +PL+ L L++++ F + +F + +S Sbjct: 273 -----TKMNQSIDIPLAAPVLRWLEEVQVFSCNSEYLFPPRRLIHMKGGVPRRNRFGHIS 327 Query: 295 ENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYI 354 +T+N AL + D H R A + + G+ R ER ++H R+ V Y Sbjct: 328 PDTLNVALLRLPLDDIEHFTVHDMRRTARTHMAALGV-DRFVAERALNHKVRD-VEGVY- 384 Query: 355 HKAEHLEERRLMLQWWADFLDV 376 ++ ++ +ER++ L WA L+ Sbjct: 385 NQYDYFDERKVALDRWAQLLEK 406 >UniRef50_C1D7T3 Integrase n=2 Tax=Laribacter hongkongensis HLHK9 RepID=C1D7T3_LARHH Length = 416 Score = 290 bits (742), Expect = 7e-77, Method: Composition-based stats. Identities = 111/398 (27%), Positives = 188/398 (47%), Gaps = 34/398 (8%) Query: 6 HPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKND 63 G+ W ++ K++ L LG YP IT+ A + AR L+ G+DP D K+ Sbjct: 33 KEKGTGRWIFRFTSPTSKKRRDLGLGKYPAITIKQAGELGEAARLLVLQGIDPIDHKREQ 92 Query: 64 KVEQSKA---RTFKEVAIEWHGT-NKKWSEDHA-HRVLKSLEDNLFAALGERNIAELKTR 118 + A TF++ AI H T + WS HA + SL ++F +G++ +A+L R Sbjct: 93 EAAAEAANERITFEQAAIHTHETLSPGWSNRHASADWINSLRRHVFPKIGDKPVADLVRR 152 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQ-EMAGAVASC-----N 172 D A + + + E AAR++QR +M + + LI N ++ + Sbjct: 153 DFAAVLLPIWL-VLPETAARVRQRMQTVMEWCLARDLIAANQCDSALSRLLPKQPSKAER 211 Query: 173 RQHRPALELKRIPELLTK-IDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 +H PA+ + +P + + + R +E +L RS E+R W E+D A + Sbjct: 212 EEHHPAMPWRLLPAFVAAHLGEGRPVSVARPMLEFLILTAARSGEVRGMVWDEVDLSAKV 271 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 WTIP ER K TH VPLS +A+AIL+Q ++ + ++F + + Sbjct: 272 WTIPGER------------MKAGATHQVPLSDRAMAILRQQRERHPFSAMVFPPNR--GR 317 Query: 292 PMSENTVNSALRVMGYDTKV---EVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 +S+ T+ L + + HGFR+ +E G + + E+ ++HM +N Sbjct: 318 VVSDMTLTRYLHEVDAPSDTEGRHATVHGFRSTFKDWAIEHG-YPGELSEKALAHMIKNK 376 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFE 386 V AAY H++ LE+RR ++Q WAD+++ R I+ Sbjct: 377 VEAAY-HRSSQLEQRRALMQAWADYVESGRAGGITNIR 413 >UniRef50_B0UGI0 Integrase family protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UGI0_METS4 Length = 413 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 87/402 (21%), Positives = 152/402 (37%), Gaps = 44/402 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDP-GDK 59 ++L+V P+G K W ++YR + + +G YP L+ AR R +A ++ A G+DP +K Sbjct: 28 LYLIVQPSGKKSWAIRYRINRQPRKFTIGPYPLFDLSAARERARQALQMAARGLDPYREK 87 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKWS--EDHAHRVLKSLEDNLFAALGERNIAELKT 117 K + V + + K +A + L +++ G R I ++ Sbjct: 88 KAAEAAAIEAKDQVSRVVATYVERHLKVKGKPGYAEQAEGLLRNHVLPHWGHRRIGDIGR 147 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 D++A + + G A R+ T A+ +A+ LI P + + + + Sbjct: 148 ADVIALVDGLTDRGMTTGANRVFATTRALFNFALGRDLITSTPFLGLKPPLPNPS--RDR 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L + + + ++L LL R +E WSE+D ++WTIP Sbjct: 206 VLSDAEVRWAW--LCAERIGFPFGPMVQLLLLTGTRRNETGEMVWSELD--GTVWTIPGA 261 Query: 238 REPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENT 297 R +K H+VPL A+ IL + + G +F + P S+ + Sbjct: 262 R------------TKNSLEHVVPLPPAAIEILAAVPRIAGRPGYVF--TRNGSTPASDLS 307 Query: 298 VNS--------------ALRVMGYDTK----VEVCGHGFRTMACSSLVESGLWSRDAVER 339 A R G D K H R A S + G VE Sbjct: 308 AGKRRLEAAMLTVAQSEAARR-GEDPKAVTIPRWTLHDLRRTAASGMARLG-TDPHVVEA 365 Query: 340 QMSHMARNSVR-AAYIHKAEHLEERRLMLQWWADFLDVNRER 380 ++H + AA ++ +L E+R L+ W + Sbjct: 366 VLNHRSGTISGVAAVYNRYAYLNEKRAALETWGKHVTSLAND 407 >UniRef50_B8ERI0 Integrase family protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ERI0_METSB Length = 400 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 74/387 (19%), Positives = 155/387 (40%), Gaps = 28/387 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++ +V P+G+K W ++ +EGK K L +G YP I L+ AR + +ANG +P +K Sbjct: 30 LYFVVQPSGAKSWAYRFSFEGKPKKLTIGSYPAIDLSRARSIALASATKVANGRNPAAEK 89 Query: 61 KNDKVEQSKARTFK-----EVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAEL 115 K ++ + K K A + + L+ + + R + E+ Sbjct: 90 KVEREKARKPSDLDLVDVVVAQFVVKHVEPKTRPQSAKEMKRILKREILSRWSGRRLTEI 149 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQH 175 D+ ++A+ +A R+ + ++++ +++ ++ +P + S ++ Sbjct: 150 TRSDIRDLLEAIADR-APIMANRVFEVISSLINWSISMEMLSASPIAGLRK--PSPAKRR 206 Query: 176 RPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIP 235 L K + ++ S I++ +L R SE+ WSEIDFE WT+P Sbjct: 207 DRILSEKELTDVWQA--SERAGWPYGSMIKVLILSGQRRSEVSDMTWSEIDFEERSWTLP 264 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSE 295 R +K H++PLS + +L + + +F + P+ Sbjct: 265 AVR------------TKNGKGHIIPLSPTIIDVLLTLPRIGSESGFVF--TTNGFSPIRN 310 Query: 296 NTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR--NSVRAAY 353 +M ++ H R + + + VE+ ++H + V+ Y Sbjct: 311 FARRKKALMMSCQSENNWTLHDLRRTFATGMARLKVELP-VVEKLLNHSSGTFGGVQGVY 369 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRER 380 + + E+R + WA +++ + Sbjct: 370 -QQYDFQSEKREAMNLWASYVNKITNK 395 >UniRef50_C7JFF4 Phage integrase n=8 Tax=Acetobacter pasteurianus RepID=C7JFF4_ACEP3 Length = 434 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 105/388 (27%), Positives = 185/388 (47%), Gaps = 36/388 (9%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L+V GS+ W +++ GK++ ++LG ++LADAR + + R + N +DP Sbjct: 63 LWLVVT-GGSRLWEFRFKSPVTGKRRQMSLGSAYSLSLADAREKAAKCRGMTENRLDPII 121 Query: 59 KKKNDKVEQS--KARTFKEVAIEWHGTNKKWSEDHA--HRVLKSLEDNLFAALGERNIAE 114 +++ +K + K TF EVA ++ +DH SL ++F GE+++ + Sbjct: 122 EREKEKAARELEKGLTFAEVAAQYIKAQTPAWKDHRSPAVWTSSLTQHVFPIFGEKSVRD 181 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE-------MAG 166 + T+D+L ++ + + + E + R++ R I+ YA + NPA+ + Sbjct: 182 VDTQDVLTALRPIW-TEKTETSGRIRGRIERILDYARVQQWREGENPARWRGHLSVMLPA 240 Query: 167 AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 QH A E K I E++ + S G + A+ L RS E+R A WSEID Sbjct: 241 PSKITKVQHHKAAEWKDISEIMKALQSING--MAAKAVRFCCLTAARSGEVRNAVWSEID 298 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGA--HDLIFI 284 ++W +P E+ K H VPLS A+ +L+++ A DL+F Sbjct: 299 LSEALWVVPAEK------------MKAGREHRVPLSGDAVKVLQEVLPHRDAVSGDLLFP 346 Query: 285 GDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM 344 G +P+S+ V+ AL EV HG R+ E+ + SR+ E ++H Sbjct: 347 GAK-RGRPLSDVAVSKALHHA--AGTKEVTVHGLRSTFRDWAGETKVCSREVAEAALAHA 403 Query: 345 ARNSVRAAYIHKAEHLEERRLMLQWWAD 372 ++ V AAY +++ L+ RR +++ WA Sbjct: 404 GKSKVEAAYF-RSDLLDLRRPLMEEWAA 430 >UniRef50_C8PUK8 Phage integrase family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PUK8_9GAMM Length = 446 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 101/420 (24%), Positives = 183/420 (43%), Gaps = 39/420 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + L + PNG +R +Y + GK+ + LG YP +LA A+ ++ LLA +DP Sbjct: 34 LELRIRPNGKAEFRHRYTHPYTGKRPYMTLGSYPAFSLAQAKQAYNDNMALLAQTIDPLT 93 Query: 59 KKKND--KVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDN------LFAALGER 110 K+ + K + TF+ VA +W N++ + R +++ + L A G+ Sbjct: 94 HKEQENAKQAYALDNTFEAVAKDWL--NEQTNNPDYVRAKQTIVNWEYQLKPLIATFGKM 151 Query: 111 NIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM--AGAV 168 I + T +L ++ ++ + ++ R++ I +AV +GLI++NP ++ A A+ Sbjct: 152 PIGSITTPQVLRLLREIQKTH-IQKGNRVKAIAGRIFAHAVINGLIEHNPVLQLAGARAL 210 Query: 169 ASCNRQHRPAL-ELKRIPELLTKIDSYTGRPLT-RWAIELTLLIFIRSSELRFARWSEID 226 HRPAL ELL +ID+ T L + ++L L F+R ++ +W++I Sbjct: 211 KPTRSDHRPALITPAEFAELLKEIDNITNAKLFQKEILQLLALTFVRIGDVCAMKWADIH 270 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF-IG 285 EA +W P++ M +VPL+ Q +AIL+++ + G + +F G Sbjct: 271 LEAKMWVFEPQKGKNRHD--------MVDCLVVPLAPQTIAILERMHEITGGMEYVFYTG 322 Query: 286 DHDSHKPMSENTVNSALRV------------MGYDTKVEVCGHGFRTMACSSLVESGLWS 333 + +N L G HGFR A + L+E ++ Sbjct: 323 KRKKGQHADPQQINRILNDPSMNKAGMGKNYCGKGYLNVHSPHGFRASAKTLLMERLGYN 382 Query: 334 RDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYAKINNP 393 E Q + Y ++ E + ER M+ WA++LD + + + N Sbjct: 383 HLITEIQSGRSMPDVYGNTY-NRMEAINERIKMMNDWANYLDQLKSGKMDNILFVDFKNA 441 >UniRef50_A3VAJ4 Site-specific recombinase, phage integrase family protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VAJ4_9RHOB Length = 392 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 83/384 (21%), Positives = 154/384 (40%), Gaps = 32/384 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +H+ V G+K + R G ++ + +G YP ++LADAR R E + + G + + Sbjct: 37 LHVRVSTTGAKVFYTLVRPNGSRRRIKIGPYPVVSLADARRRAMEIARDVELG----EFE 92 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 K +V ++ A T E+ ++ + K + R L F L +R I +++ +D+ Sbjct: 93 KTPEVPEASADTLGEMIPKFIELHAKPNTKDWKRTESVLHK--FDGLKDRPIDQIRRQDV 150 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + + +G A R +M + V G I+ +P + + Q L Sbjct: 151 SKVLDGIIANGTPTRANRALSAIKKLMNWCVMRGDIETSPVALLRP--PTREVQRDRVLS 208 Query: 181 LKRIPELLTK--IDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 I + + Y P ++L L+ R SE+ RWSE++ + IW +P R Sbjct: 209 DAEIRAIWQHSDAEDYPFGP----FLKLLLISGQRRSEVAGMRWSELNLDEGIWELPANR 264 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 K H+VPL QA+ IL+ + +F D +F + Sbjct: 265 V------------KNARLHIVPLPVQAVDILRGLHRF-LDSDFVF-TTTGRSAISGFGRL 310 Query: 299 NSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR--NSVRAAYIHK 356 + + + H FR A + + + G+ ++ +H + + V A Y ++ Sbjct: 311 KERVDTALPEGTPDWRFHDFRRTASTGMAKLGVMP-HVIDAVTNHKSGVVSGVGATY-NR 368 Query: 357 AEHLEERRLMLQWWADFLDVNRER 380 + E+R L WA +D Sbjct: 369 YTYFNEKREALAQWAAHIDEILRG 392 >UniRef50_A4A7S2 Phage-related integrase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A7S2_9GAMM Length = 412 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 113/400 (28%), Positives = 174/400 (43%), Gaps = 48/400 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV GSK W +Y++EG+++ L LG YP ++LA AR+RRD AR G DP + + Sbjct: 28 LYLLVARGGSKNWIYRYQHEGRRRELGLGGYPAVSLAKARMRRDAARDQRQQGHDPLEVR 87 Query: 61 KNDKVE------------QSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAA 106 + + + A TF VA E+ N + H + +L+ F Sbjct: 88 DRQRAQLRAQMAAETAERERAAMTFLRVADEFIDNNAAGWTNRKHGQQWRNTLKTYAFPI 147 Query: 107 LGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE-- 163 LG + E+ T +L + + + + E A RLQ R ++ YA G + NPA+ Sbjct: 148 LGVVPVGEVTTDQVLQVLTPIW-TEKTETAKRLQGRIERVLDYATTKGHREGDNPARWRG 206 Query: 164 -----MAGAVASCNRQHRPALELKRIPEL---LTKIDSYTGRPLTRWAIELTLLIFIRSS 215 + +H+ AL PEL LT +D+ GR L + R+S Sbjct: 207 HLDNVLPRPGKVHRVEHQRALPYLEAPELAAKLTDVDTAAGRALLLTLLC-----ATRTS 261 Query: 216 ELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF 275 E A WSEID + W IP R K H +PL A+A+LK Sbjct: 262 ETLEATWSEIDLDRKEWRIPAVR------------MKAGKEHRIPLCDAAVAVLKTQSVH 309 Query: 276 YG-AHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSR 334 G D +F G K +S + + L+ + HG R+ + E + Sbjct: 310 QGERGDWVFPGQK-RGKCLSNMAMTNVLKRTDW--LERTSVHGLRSTFRDWVGEKTRYPE 366 Query: 335 DAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 E ++H + V+AAY +A+ +E+RR M+ WA FL Sbjct: 367 RMAEVALAHQLTDKVQAAYF-RADLMEQRREMMNEWAAFL 405 >UniRef50_B9R123 Site-specific recombinase, phage integrase family protein n=3 Tax=Alphaproteobacteria RepID=B9R123_9RHOB Length = 451 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 103/410 (25%), Positives = 177/410 (43%), Gaps = 47/410 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + + +G K W L+ K++ + LG YP+++LA AR R E ++L+ GVDP + + Sbjct: 56 LAIQLLSSGGKTWILRTTVGYKRRDIGLGGYPDVSLAQARERARETKELIRQGVDPIEHR 115 Query: 61 KNDKVE----QSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 K+ + + Q + +F + + +E H + +L+ LG+ + Sbjct: 116 KSLQSQLVASQMRGLSFSDAVDRYLSVKSAELRNEKHKEQWASTLQTYALPHLGKMLVDN 175 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE-------MAG 166 + T+D+L ++ + + + E A+RL+ R A++ ++ SG NPA+ + Sbjct: 176 ITTQDILLVLQPIW-TDKTETASRLRGRIEAVLSWSTVSGHRTGENPARWAGNLKELLPS 234 Query: 167 AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 + PA+ L + G A+E L RS E+R A WSEID Sbjct: 235 PSKIAKSGNWPAIALVEADSWFEGLRLRDG--TAARALEFLALCASRSGEVRKATWSEID 292 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 + W IP ER K+ H VPLS ALA+L + + IF Sbjct: 293 HKQKTWVIPGER------------MKVGKDHRVPLSATALALLDALPKRE-DSPFIFPAP 339 Query: 287 HDSHKPMSENTVNSALRVMG----YDTKVEVC---------GHGFRTMACSSLVESGLWS 333 P+S+ +++ +R M + + HG R+ ESG ++ Sbjct: 340 RGG--PLSDMALSAVMRRMHSVELDNGRPGWRDPRNGHPAVPHGLRSTFRDWAAESG-FA 396 Query: 334 RDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFIS 383 RD E +SH + V AY +++ +E RR M+ WA+FL I Sbjct: 397 RDMAEIALSHSVGSEVERAY-RRSDLIERRRGMMSAWAEFLRGATASNIV 445 >UniRef50_B0U0U5 Phage integrase n=1 Tax=Francisella philomiragia subsp. philomiragia ATCC 25017 RepID=B0U0U5_FRAP2 Length = 398 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 105/391 (26%), Positives = 181/391 (46%), Gaps = 33/391 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V NG+K W+L++ K+K LG YP L +AR E R+ + NG D Sbjct: 25 LYLRVDKNGNKTWQLRHTINEKRKWFGLGSYPSTNLNEARKLSAELRERIDNGEDILA-- 82 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKW--SEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K + K K++ ++ KK SED ++ ++++ +G R+I +K + Sbjct: 83 ---KPDAKKVIYVKDLVAQYIEFQKKNSSSEDFIKKLTNISKNHIIPKIGNRDIQTIKRK 139 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 D + ++ + G ++ I R A + LI+ +P ++A A+ Q P Sbjct: 140 DCIDVLEPLIDKGA--TRNKVLSALKGISRLARHNELIENDPTHDIARALPQYKAQPMPH 197 Query: 179 LEL-----KRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 + LL + G ++R+A++L I +R EL +W D E S Sbjct: 198 ISPLHNKSLLKELLLDLDNYTKGNYISRYALKLLPYIVLRPIELVSLQWDFYDAENSRII 257 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG-DHDSHKP 292 IP E KMR H+V LS QA I++++K G F D+H Sbjct: 258 IPAE------------IMKMRKDHIVCLSRQAKQIIEELKDLQGGFKYFFPSYYKDNHDH 305 Query: 293 MSENTVNSALRVMGYDT--KVEVCGHGFRTMACSS---LVESGLWSRDAVERQMSHMARN 347 ++ ++ A+R MGY+ K + HGFR + ++ L E +S A+E ++H +N Sbjct: 306 INYESLAKAIRSMGYNGIDKPKQTLHGFRHIYSTAIHELQEQYHFSELAIELVLAHTDKN 365 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLDVNR 378 RA+Y + A+ L ER ++Q +AD++D + Sbjct: 366 KSRASY-NFADKLSERAKIMQVYADWIDNLK 395 >UniRef50_Q9RM38 Integrase (Fragment) n=56 Tax=Enterobacteriaceae RepID=Q9RM38_ECOLX Length = 304 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 160/259 (61%), Positives = 198/259 (76%), Gaps = 1/259 (0%) Query: 132 RLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKI 191 +LEVA+R +Q + IMR+AV LID NPA + G R+H PAL L+R+PELL +I Sbjct: 41 KLEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPALPLERLPELLERI 100 Query: 192 DSYT-GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRG 250 +Y GR LTR A+ L L +FIRSSELRFARWSEIDF +WTIP REPI GV++S RG Sbjct: 101 GAYHQGRELTRHAVLLMLHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRG 160 Query: 251 SKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTK 310 +KMR H+VPLS Q++AILKQIK G ++LIF GDH+ +KPM ENTVN ALRVMGYDTK Sbjct: 161 AKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDHNPYKPMCENTVNKALRVMGYDTK 220 Query: 311 VEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWW 370 ++CGHGFR MACS+L+ESGLW++DAVERQMSH RN+VR AYIHKAEHLE R+ M+QWW Sbjct: 221 KDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMMQWW 280 Query: 371 ADFLDVNRERFISPFEYAK 389 +D+L+ RE + P+ K Sbjct: 281 SDYLEACRESYAPPYTIGK 299 >UniRef50_A2SG96 Integrase or site-specific recombinase n=19 Tax=Proteobacteria RepID=A2SG96_METPP Length = 466 Score = 286 bits (733), Expect = 8e-76, Method: Composition-based stats. Identities = 100/412 (24%), Positives = 169/412 (41%), Gaps = 45/412 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE------------------ITLADARVR 42 ++ V P+G+ R YR +++ L LG Y ++LA+AR+ Sbjct: 44 LYAYVAPSGTVSLRYDYRIGRRRETLTLGRYDATAPARVPRSLDVLEYGMGLSLAEARLL 103 Query: 43 RDEARKLLANGVDPGDKKKNDKVEQSKARTFKEVAIEWHGTN-------KKWSEDHAHRV 95 +A++ L GV P K K +S A TF + A + ++ ++ Sbjct: 104 LTKAKRALEQGVSPSRAKAEQKAAESDALTFGKWAERYFEFKGDPKSKGEQLADSTLAMR 163 Query: 96 LKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL 155 + + L LG+ + E+ L A ++ VA ++ + R+ + G+ Sbjct: 164 RSTYKRALEKPLGKLMLEEITPNRLAALCDDIKAQRGPAVAVHAREIVLMVYRHVQRKGI 223 Query: 156 IDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSS 215 NPA+ + + + AL + L +D P R A+ LL +R Sbjct: 224 EVPNPAERVQASAIARFEPRDRALSPSELRLFLAALDQCATMPTLRLAVRFVLLTGVRKG 283 Query: 216 ELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF 275 E A W EI F+ WTIP R K H+V LS QA+ IL ++ Sbjct: 284 EFIGATWDEIVFDTETWTIPSRR------------MKGGRAHVVYLSDQAMDILTTLRSC 331 Query: 276 YGAHDLIFIGDHDSHKPMSENTVNS----ALRVMGYDTKV--EVCGHGFRTMACSSLVES 329 + A + G +DS P+S+ T+N A+R + H R +SL + Sbjct: 332 FSASRYLHPGRYDSDLPISDATLNRVIAMAIRGIQATAPEFQPFTVHDLRRTFSTSLNRA 391 Query: 330 GLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 + +E ++H+ RN + A Y + A + ERR+M+Q WAD LD+ + Sbjct: 392 K-FDERWIEMALAHVPRNRIAATY-NVARYAAERRIMMQAWADMLDLWEKGE 441 >UniRef50_A3JW30 Site-specfic recombinase, phage integrase family protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JW30_9RHOB Length = 389 Score = 286 bits (733), Expect = 9e-76, Method: Composition-based stats. Identities = 95/391 (24%), Positives = 174/391 (44%), Gaps = 31/391 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V +G YW + G ++ + LG P TLA+AR E +++ G DP +K Sbjct: 26 LQLYVKKSGRSYWVQRLTVNGIRRDIGLGSPPITTLAEAREVAFENKRIARAGGDPLAQK 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSE--DHAHRVLKSLEDNLFAALGERNIAELKTR 118 + ++ +F++ A + A + ++E +F +G ++ +++ Sbjct: 86 RQ----KAVIPSFEQAARQVVVELGPTWRGAKEAASFISTMECYVFPRIGGSRVSNVQSS 141 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPA--QEMAGAVASCNRQHR 176 D+ I V + VAARLQ R +A+ ++++ NPA +A + + R Sbjct: 142 DVRNIIMDVRKT-APTVAARLQTRISAVFKFSIAKNWRTDNPATSSALALPKPTHKPKPR 200 Query: 177 PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 +L ++ + +++ T+ AIE T+L RS E+R A W EID + +W P Sbjct: 201 VSLPYLQVSGCIHAVNNSHAWVGTKLAIEFTILTASRSGEVRKAEWCEIDGD--LWNRPS 258 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 E K H VPLS +ALAIL++ ++ LIF +S+ Sbjct: 259 EH------------MKEEIAHSVPLSERALAILEKAQEINNESGLIFPAPRGG--MLSDM 304 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHK 356 T++ ++ +G+ HGFRT + E ++ + E ++H AY + Sbjct: 305 TMSKLIKELGFAAD----VHGFRTSFRTWSQEQTNFAWEVGEVALAHSVGGKSERAYA-R 359 Query: 357 AEHLEERRLMLQWWADFLDVNRERFISPFEY 387 +++LE+RRLM+ W+ +L + Sbjct: 360 SDYLEKRRLMMAAWSSYL-TLPRGEVVQINA 389 >UniRef50_A1AQ50 Phage integrase family protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AQ50_PELPD Length = 427 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 85/399 (21%), Positives = 158/399 (39%), Gaps = 46/399 (11%) Query: 2 HLLVHPNGSKYWRLQYRYEGKQKMLAL--GVYPEITLADARVRRDEARKLLANGVDPGDK 59 + V+P+G K W Y ++G++K + L G YP+++LADAR D A+ L NG+DP + Sbjct: 31 SIRVYPSGEKAWYFIYTFDGRKKYMRLKDGGYPDVSLADAREAFDIAKVKLKNGIDPLAE 90 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 + ++++ KE E+ K + + ++L+ + G+R + ++K RD Sbjct: 91 LEQARLDRKHTPFVKEFVDEFIRIYCKENNRGWKEIERALKSEIVPRWGKRKLTDIKRRD 150 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPAL 179 L+ + ++ G +A R+ T + +A++ ++ NP M+ + L Sbjct: 151 LVLVLDEIKERGAPVMANRILAYTRKMFSWALERAALEVNPFLMMSR--PNDETSRERVL 208 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 K I +D + A++L L+ R E+ +EID E W IP R Sbjct: 209 SEKEIKTFWHNLDECKMSDSIKRALKLILVTGQRPGEIIGMHRNEIDGE--WWEIPAAR- 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD----------S 289 SK + H V L+ A ++ A IF + Sbjct: 266 -----------SKNKQAHRVFLTITAKQLI------GDASGFIFESPANPAKPDETPPKP 308 Query: 290 HKPMSENTVNSAL----------RVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVER 339 KP T+ + +V+ H R A + E + D ++R Sbjct: 309 AKPYEVRTMTHDIKQNLPHTPHSKVIDRLKVPHFTPHDLRRTAATRWAEM-EITGDMIDR 367 Query: 340 QMSHMARNSVR-AAYIHKAEHLEERRLMLQWWADFLDVN 377 +H+ R ++ + E++ L+ W L+ Sbjct: 368 LQNHITRQKQGVGHVYNRYSYAREKQQALEAWEQKLNSI 406 >UniRef50_Q1R2C9 Integrase-like protein n=9 Tax=root RepID=Q1R2C9_ECOUT Length = 404 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 88/385 (22%), Positives = 153/385 (39%), Gaps = 22/385 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + V P G ++ +Y++ GK + L +G YP L +AR R L + +P K Sbjct: 28 LSVRVSPKGRVVFQYRYQWAGKGERLDIGTYPATGLKEAREEVIRLRGELESNRNPRLVK 87 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + +K + ++A T + V W+ ++ + ++L+S E +LF+ +G D Sbjct: 88 QAEKRKATEAMTVESVIRAWYEAYCVKNKKGSEQILRSFELHLFSKIGNIPHDAATLHDW 147 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR-QHRPAL 179 L ++ + +A RL +A + LI+ P ++ G + Q + L Sbjct: 148 LEVLEPLSTK-TPAIADRLLINAKQAHVWAYKRKLIETRPLSDITGKDMDIRKGQKKRFL 206 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 I L ID P R I+L L RSSEL AR + DF +WT+PPER Sbjct: 207 THDEIKILYAAIDGSRMVPKYRAFIKLLLHFGCRSSELITARVDDFDFINKVWTVPPERH 266 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF-------IGDHDSHKP 292 + P+ ++K D++F S + Sbjct: 267 KTGEI--------TGEPLKRPIIEPVEELIKYAISMNNGSDMLFTKEGSREPVGRTSLQS 318 Query: 293 MSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAA 352 + N + A R +GY H R A ++ + + E + H V Sbjct: 319 LPYNLMQYAWRRLGYQF-PHWSLHDLRRTARTNFSDLT--APHIAEIMLGHKLPG-VWQV 374 Query: 353 YIHKAEHLEERRLMLQWWADFLDVN 377 Y K+++LEE+R Q W + ++ Sbjct: 375 Y-DKSDYLEEQRKAYQAWWERVESI 398 >UniRef50_B0VTB2 Putative prophage integrase n=1 Tax=Acinetobacter baumannii SDF RepID=B0VTB2_ACIBS Length = 388 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 92/388 (23%), Positives = 168/388 (43%), Gaps = 37/388 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V PNG K W L YR GKQ LG YP + +AR++ + + Sbjct: 25 LNISVFPNGKKKWVLSYRQNGKQNQKMLGEYPVMGCKEARLQARQLKL------------ 72 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + + + + +V EW K S+ + V L L I E++ + Sbjct: 73 -EYQGKVANSPPVHKVIEEWLSIMKSQWTSKKYYDTVEYRLA-YLTEDFKNLPINEVERK 130 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 + IK + G LE A+R + + +A+ S D NP + + P Sbjct: 131 HISKKIKEIVAKGTLETASRALRLGKQVFDFAIASDYTDRNPCTLVEDVIPEYESDSHPC 190 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWS--EIDFEASIWTIPP 236 L +PE ++ + + + A+ L R +EL ARW E+DFE +W IP Sbjct: 191 LPASEMPEFFRRMQASHSSSIVKMAMLLVCYTGTRITELLKARWDSGELDFENKVWIIPA 250 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 +R K R +VPL Q A+ K+++ IF ++ M+ Sbjct: 251 DR------------MKRRKELMVPLVPQIYALFKELESVKIDDGYIFKKRGKPYEYMTSE 298 Query: 297 TVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR----NSVRAA 352 +V + ++ MGY+ K + HGFR++ + ES L+ + ++ Q++H+ + + Sbjct: 299 SVLTMIKRMGYEDK--MVTHGFRSLFSTHANESKLFRGEVIDYQIAHVNKSTKADKTSKI 356 Query: 353 YIHKAEHLEERRLMLQWWADFLDVNRER 380 Y ++AE+ +ER ++ W+A+ ++ + Sbjct: 357 Y-NRAEYWDERVELMTWYANEVEGWIKG 383 >UniRef50_Q3J2T0 Putative P4-family integrase n=5 Tax=Rhodobacteraceae RepID=Q3J2T0_RHOS4 Length = 439 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 110/424 (25%), Positives = 188/424 (44%), Gaps = 55/424 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDK- 59 + L + P G+K W L+ G ++ + LG YPE+ LA+AR R EA++ +A GVDP ++ Sbjct: 35 LLLQITPTGAKSWLLRTTVAGTRRAMGLGSYPEVGLAEARERAREAKRKIAAGVDPIEER 94 Query: 60 ---KKNDKVEQSKARTFKEVAIEWHGTNKKWS-EDHAHRVLKSLEDNLFAALGERNIAEL 115 + Q ++ TF + A +W E V +L F +G + EL Sbjct: 95 KATRAALAAAQRRSLTFADAADKWIKAKLSDRPEKSQKAVRATLTAYSFPEIGALTVQEL 154 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE---MAGAVASC 171 +D++ + + + + + A +++ AI+ +A SG NPA+ + + + Sbjct: 155 TPQDVVRALNTIW-TAKPDTATKMRGYLEAILSWATVSGYRTGDNPARWAGNLKELLPAP 213 Query: 172 ------NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEI 225 + PA+ + R+ + ++ G + A+ L RS E+R A WSE+ Sbjct: 214 SVVAKGRAGNFPAVPVARLADWWEELGQREG--MGATALRFAALTAARSGEVRGALWSEV 271 Query: 226 DFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIG 285 D +A++W +P R KM H VPLS A+A+L+ + + G DLIF G Sbjct: 272 DLDAALWVVPGAR------------MKMGREHRVPLSGPAVALLRGLPRLAGTGDLIFPG 319 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVE------------VC---------GHGFRTMACS 324 +S+ +V++ +R M D + E HG R+ Sbjct: 320 PRGG--ILSDMSVSAVMRRMQEDAETEAKMAGRPVSAAGWRDTRTGRPAVPHGLRSSFRD 377 Query: 325 SLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISP 384 E G + RD E ++H+ + V AY +++ LE RR M++ WAD L + Sbjct: 378 WAAEVG-YDRDMAEIALAHLVGSEVERAY-RRSDMLERRRAMMERWADVLAGRSGASVVE 435 Query: 385 FEYA 388 F A Sbjct: 436 FRRA 439 >UniRef50_B0KFC6 Integrase family protein n=5 Tax=Pseudomonas putida RepID=B0KFC6_PSEPG Length = 436 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 94/395 (23%), Positives = 174/395 (44%), Gaps = 29/395 (7%) Query: 1 MHLLVH------PNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGV 54 ++L V + S++WRL+YR GK+ + +G YP++ L +AR AR +AN + Sbjct: 49 LYLQVRASLKPGKSPSRHWRLKYRLRGKENVYVIGRYPDVGLKEARELARAARNSVANHI 108 Query: 55 DPGDKKKNDKVEQ--SKARTFKEVAIEWHG-TNKKWSEDHAHRVLKSLEDNLFAALGERN 111 DP KK Q ++ARTF VA EW + +L++++ A+GER Sbjct: 109 DPLKAKKAKIEAQWLNEARTFAYVAEEWMKFKSADLVSKSVAGFRGALQNHILPAIGERP 168 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPA-QEMAGAVAS 170 ++E+K + A I + + +A R++ +I+ +A G ++ N A Sbjct: 169 VSEIKLEHITAIITELRYKRIMAMARRVRTIIRSILGFAEGRGWVERNVALSNTEELKIR 228 Query: 171 CNRQHRPALE-LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 PA+E + + L ++D +A+ L +L+ +R EL RW ++D Sbjct: 229 HVVTSNPAIERPADLGKFLLRLDDLNLG-SVAYAMRLLVLLPVRPGELVKMRWEDVDLIG 287 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY----GAHDLIFIG 285 + W + ++ H+VPL QAL +L+++ + + +F Sbjct: 288 ADWRYVVSKTKHLD----------KSKHIVPLPEQALVLLRELHKDRVVDDAGNGWVFGS 337 Query: 286 DHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMA 345 + + ++ +L+ + + + HGFR + E +E +SH Sbjct: 338 PVYPGRSIDATSILKSLQKVWPEY--AITAHGFRATYRTIAHEHLGIDPIVLELSLSHRM 395 Query: 346 RNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 ++ A Y +A+ L +RR Q WA++LD R Sbjct: 396 PGALGAVYA-RAQLLSQRREAAQLWANYLDQLRNN 429 >UniRef50_C3MAV8 DNA integration/recombination/invertion protein n=1 Tax=Rhizobium sp. NGR234 RepID=C3MAV8_RHISN Length = 429 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 84/401 (20%), Positives = 161/401 (40%), Gaps = 48/401 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V G K W ++YR+ GK + + LG +P I+L+DAR +A ++++ G DP +K Sbjct: 32 LYLIVQTTGVKSWAVRYRHAGKPRKMTLGGFPAISLSDAREEARKALRMVSEGRDPATEK 91 Query: 61 KNDKVEQSKARTFK-EVAIEWHGTN--KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + ++ + E+ + K + + +E NL ++ + + Sbjct: 92 AEQEPKRPAHMDLMPALLDEFVTRHVAVKNRPSYVRESKRIVEKNLKPKWKQKLVKTVTK 151 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 RD+L + + G +A R++ + +A++ ++D +P + R Sbjct: 152 RDVLKLLDEIVDRGSPIMANRVRALLSKFFAWAMERDIVDASPVVSIKAPSEEKTRDRIL 211 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS--IWTIP 235 E R L + +Y P+ + L LL R +E+ A W E++ E + +W I Sbjct: 212 TDEEIRFLWLAAEKLAYPFGPVVK----LLLLTAQRRTEVSDALWDELELEGNNQLWVIS 267 Query: 236 PEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHD------LIFIGDHDS 289 +R +K + H VPL+ AL I++ + + A D +F Sbjct: 268 VDR------------AKNKKEHFVPLTASALEIIEGLPKIKPAEDEKAKPIYLF--TTTG 313 Query: 290 HKPMSENTVNS----------ALRVMGYDT-------KVEVCGHGFRTMACSSLVESGLW 332 P+S + A + H R A S + + Sbjct: 314 KTPVSGFSKAKTQLDGEMLAIARKEAEERGEDPEGISIEPWTYHDLRRTAASGMARLSV- 372 Query: 333 SRDAVERQMSHMARN-SVRAAYIHKAEHLEERRLMLQWWAD 372 VE ++H + + AA ++ ++ EE+R L WAD Sbjct: 373 PVHIVEAVLNHRSGSIKGVAAVYNRYDYAEEKRAALTAWAD 413 >UniRef50_Q92LG2 Phage-related integrase n=1 Tax=Sinorhizobium meliloti RepID=Q92LG2_RHIME Length = 409 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 103/393 (26%), Positives = 175/393 (44%), Gaps = 42/393 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE----ITLADARVRRDEARKLL-ANGVD 55 ++L V NGSK + ++ + KQ+ +G Y +LA+AR RRDE ++ A G+ Sbjct: 26 LYLRVRENGSKSFIVKATIDKKQREWTIGSYGSEEHHFSLAEARKRRDEIMAVIRAGGIS 85 Query: 56 PGDKKKNDKVEQSKARTFKE-----VAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALG 108 K + + ++ TF +IE + + H + +LE ++ Sbjct: 86 EPTGKSVTQSVEPESTTFPAPLFGPFSIELIQQIEGGFRNAKHRAQWRSTLETY-CKSIW 144 Query: 109 ERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE---- 163 E+ + + T D+LA ++ + + + E A+R++ R ++ A G NPA Sbjct: 145 EKRVDRITTDDVLAILRPIWST-KAETASRVRGRIERVLNAAKVRGFRSGENPAAWQGHL 203 Query: 164 --MAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFAR 221 + R H PAL + +P L K+ + + A++ +L RS ELR A+ Sbjct: 204 QLLLPKRQKLQRGHHPALPFQDLPTLWQKL--TSIDTIASAALQFLILTAARSGELRGAK 261 Query: 222 WSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDL 281 W E D E +WTIP R K HLVPLS + ILK++++ D Sbjct: 262 WEEFDLEKRLWTIPASR------------MKAAREHLVPLSDSCIEILKRMQKIR-HSDF 308 Query: 282 IFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQM 341 +F G + H P+S+ T++ L + HGFR+ E +SR+ E + Sbjct: 309 VFPGTRE-HAPLSDMTLSKVLHGLCKGY----TVHGFRSTFRDWCGEKTDFSREHAEACL 363 Query: 342 SHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 +H ++V AY + LE RR ++ W F+ Sbjct: 364 AHTIGSAVERAY-RRGNSLEPRRRIMTAWEAFI 395 >UniRef50_B5J7B6 Site-specific recombinase, phage integrase family protein n=3 Tax=Proteobacteria RepID=B5J7B6_9RHOB Length = 446 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 96/407 (23%), Positives = 166/407 (40%), Gaps = 51/407 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V P+GS+ W + G+++ + LG P +TLA AR + + + G DP + Sbjct: 50 LMLRVEPSGSRRWVQRIVISGRRREIGLGTPPVVTLAAAREAALDNMRTVQAGNDPVAIR 109 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 +N + TF A S+ H + +L+ LG + ++ T Sbjct: 110 RNAR----TFLTFATAAEHAIAAKSSEFRSDKHRKQWRSTLDTYALPILGALPVGKVNTA 165 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS-------- 170 D+L ++ + + + E A+RL+ R AI+ +A +G + A G ++ Sbjct: 166 DVLRVLEPIW-TEKTETASRLRGRIEAILSWATAAGHREGENAARWKGNLSEMLPKPQRV 224 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 H PAL + + G + A+E L RS E+R W+E+D Sbjct: 225 AKTVHHPALASSDVSVWYAALRGRDG--VAARALEFLALTAARSGEVRGMTWAEVDLTTG 282 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDL-----IFIG 285 +WT+P +R K H VPLS A ++L+ + A +F Sbjct: 283 VWTVPADR------------MKASREHRVPLSAPAFSLLESMAVAPDADPTDCGRPVFSA 330 Query: 286 DHDSHKPMSENTVNSALRVM-------------GYDTKVEVCGHGFRTMACSSLVESGLW 332 +S+ ++++ +R M + HG R+ E G + Sbjct: 331 PRGG--VLSDMSLSAVMRRMQQAEIDVGCAGWLDRASGRPAVPHGLRSTFRDWTAECG-Y 387 Query: 333 SRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRE 379 RD E ++H ++V AY +++ LE RR M+ W+DFLD E Sbjct: 388 PRDMAEMALAHDVGSAVERAY-RRSDMLERRRAMMAAWSDFLDGRVE 433 >UniRef50_C6XJP3 Integrase family protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJP3_HIRBI Length = 395 Score = 283 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 101/386 (26%), Positives = 174/386 (45%), Gaps = 32/386 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANG--VDPGD 58 ++L V G++ W YR+ K+ + LG YP ++L++AR + R L DP Sbjct: 28 LYLNVKQTGARNWLFIYRWGDKRPSIGLGGYPSVSLSEARKQAAMCRDWLNQTPRKDPKK 87 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELK 116 + + + F A+ K + H + +LE + + E++ Sbjct: 88 EWMVLNAPEVRIEPFGPFALRHIDAIKGDFRNAKHIAQWRSTLERYAEPIW-AKPLNEIE 146 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQE---MAGAV--AS 170 +L ++ + + + E A R++ R A++ A G+ + NPA + + Sbjct: 147 VDHVLKCLEPIWAT-KNETARRVRGRIEAVLESARVRGMREDPNPASWNGQLKHVLGRKR 205 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 ++H ALE ++ + +G + A++ T+L RS E+R A W+EID EA Sbjct: 206 PKQKHLAALEYDQMHAFWQTLRQKSG--IGALALQFTILTAARSGEVRGATWNEIDIEAG 263 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 IW+IP ER K H+VPLS ALAI+ I + +LIF+G + Sbjct: 264 IWSIPAER------------MKAEKPHMVPLSQAALAIIDHISKAR-QGELIFMGMR-AG 309 Query: 291 KPMSENTVNSALRVMGYDT--KVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 KP+S+ T+ ALR M V HGFR+ + R+ +E ++H Sbjct: 310 KPISDMTMTKALRDMKLTNSQGEAVTAHGFRSTFSDWARNETDFPRELIEESLAHSL-GK 368 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFL 374 V AAY + + +E RR +++ WA ++ Sbjct: 369 VEAAY-RRGQAIERRRALMEAWALYV 393 >UniRef50_A6Q4N1 Site-specific recombinase, phage integrase family n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q4N1_NITSB Length = 412 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 95/398 (23%), Positives = 180/398 (45%), Gaps = 37/398 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++L+ PNG K +RL Y Y GK+ +G YP+I+LA AR + E ++L+ NG+DP K Sbjct: 31 LYILIKPNGRKIFRLDYVYAGKRNTYTIGDYPQISLAQARKIKYEVKELIKNGIDPNRYK 90 Query: 61 KNDKV--EQSKARTFKEVAIEWHGTNKKWSEDHA---HRVLKSLEDNLFAALGERNIAEL 115 + K E + F IE +K A + + + + +GE I E+ Sbjct: 91 QEQKRIKELEANKKFTSFVIERFIQHKAKEVSKARLQKNYINTFANYITPFIGEVKIDEV 150 Query: 116 KTRDLLAPIKAV---------EMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPA--QEM 164 +D++ +K +G+ A + + ++ +A+ + NPA ++ Sbjct: 151 TKQDIIKIVKNTYSTKLQKDNRSTGKTYKAREVYRLLKSLFDFAIHNDYTQTNPAVGIDI 210 Query: 165 AGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE 224 + A+ +RI E+ KI S P R ++ L +R + +W Sbjct: 211 DSLIPKHKPTRHKAVTNERIKEIYQKICSLQN-PYFRLPLQYIALTAVRFGNVANLKWDY 269 Query: 225 IDFEASIWTIPPEREPIPGVKHSHRGSKMR-TTHLVPLSTQALAILKQIKQF-YGAHDLI 282 DF+ + P E K + +PL+ + +++Q K +++ Sbjct: 270 KDFDKRVIIYPAE------------AMKTKNQPFRIPLTDAIVKVIQQAKAIASPYSEIV 317 Query: 283 FIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVES---GLWSRDAVER 339 F ++HKP+S+NT+ L++ + E HGFR+ + +E S +A+E Sbjct: 318 FGSPINAHKPISDNTLRKVLKI--DLNEPEQDLHGFRSSFETIALEHQKEHGCSFEAIEA 375 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 Q+ H + V +Y+ +++ LE+R+ +L WWA++L+ Sbjct: 376 QLHHNIGSKVTQSYL-RSDFLEDRKELLNWWANYLNSQ 412 >UniRef50_C6V8W5 Integrase n=4 Tax=Enterobacteriaceae RepID=C6V8W5_ECOBD Length = 294 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 159/267 (59%), Positives = 211/267 (79%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 +LVHPN S+YWRL+YR GK+K LALGVYPE++L++AR +RDEARKL++ G+DP ++K+ Sbjct: 3 MLVHPNSSRYWRLRYRILGKEKTLALGVYPEVSLSEARAKRDEARKLISAGIDPCEQKRA 62 Query: 63 DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLA 122 KV +F+ +A WH +NK+W++ H+ +VLKSLE ++F +G R+I +L T DLL Sbjct: 63 KKVVPDLQLSFEHIARRWHASNKQWTQSHSDKVLKSLETHVFPFIGNRDITKLNTPDLLI 122 Query: 123 PIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELK 182 P++A E E+A+RLQQR +A+MRYAVQSG+I YNPA +MAGA+ + RQHRPAL+L Sbjct: 123 PVRAAEAKQIYEIASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLS 182 Query: 183 RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIP 242 R+PELL++I SY G+P+TR A+ L LL+FIRSSELR+ARWSEID E ++WTIP EREP+P Sbjct: 183 RLPELLSRIGSYKGQPVTRLAVMLNLLVFIRSSELRYARWSEIDIENAMWTIPAEREPLP 242 Query: 243 GVKHSHRGSKMRTTHLVPLSTQALAIL 269 GV SHRGSKMRT HLVPLS QA+ L Sbjct: 243 GVNFSHRGSKMRTPHLVPLSKQAVPSL 269 >UniRef50_B0T5C0 Integrase family protein n=31 Tax=Proteobacteria RepID=B0T5C0_CAUSK Length = 436 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 99/403 (24%), Positives = 179/403 (44%), Gaps = 51/403 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V G K W +Y +G+ + + LG I+L++AR +AR+L +G+DP +++ Sbjct: 28 LYLMVQKGGGKSWVYRYMLQGRAREMGLGPAHTISLSEARAMARDARRLKFDGIDPIEQR 87 Query: 61 KNDKV----EQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 + + E +K TFK+ + + NK +E HA + +L G R +++ Sbjct: 88 QLARTRTTLEAAKGFTFKQASSAYIRANKAGWRNEKHAQQWESTLTTYADPIFGSRGVSD 147 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE-------MAG 166 + T +LA ++ + + + E A+R++ R A++ +A GL + NPA+ + Sbjct: 148 IDTGMILAVLEPIWST-KPETASRVRGRVEAVLDWATARGLREGENPARWKGHLEKLLPA 206 Query: 167 AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 +H AL + + + G A+E T+L R+ E+ A WSEID Sbjct: 207 KSRVHKVEHHAALPYAELSAFMAALKDQPG--AGARALEFTILTAARTGEVIGAEWSEID 264 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAH-DLIFIG 285 +W IP +R K R H VPL+ + IL+ K Y A + Sbjct: 265 LAGQVWIIPADR------------MKGRKEHRVPLTAPLIEILEGRKADYAAVIRRVLES 312 Query: 286 DHDS-----------------HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVE 328 K +S + + L+ M + ++ HGFR+ E Sbjct: 313 KRQPIPDDIPPVGPLFWGTLFGKKLSNMAMLAVLKRMK---REDLTAHGFRSTFRDWAAE 369 Query: 329 SGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWA 371 + + + VE ++H N V AAY + + E+R+L+++ WA Sbjct: 370 TTEYRSEIVEMALAHTIGNKVEAAY-RRGDLFEKRKLLMEDWA 411 >UniRef50_D1AZM1 Integrase family protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1AZM1_SULD5 Length = 416 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 95/396 (23%), Positives = 179/396 (45%), Gaps = 27/396 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEG--KQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + +L+HP+G K W Y K++ G YP+ TL +AR +R+ L+ G+DP D Sbjct: 32 LRILIHPDGRKIWEFVYTSPTLYKKRKSTFGTYPKTTLKEARDKRETYLNLIKQGIDPID 91 Query: 59 KKKNDKVEQS--KARTFKEVAIEWHGTNKKW-SEDHAHRVLKSLEDNLFAALGERNIAEL 115 ++ +K E K F V W + + + + + L ++IAE+ Sbjct: 92 AQREEKAEVKLQKESDFSNVVNLWFQSQESHIVHSTYKKKRALFDTTVIPVLKHKSIAEI 151 Query: 116 KTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM--AGAVASCNR 173 K +L+ I ++ E A RL + ++A G D+N + + + Sbjct: 152 KHDELVQII-KIKAIQTPETAKRLLGYFHDLWQFACTHGYCDFNIVPNIHAKSVLPKIVK 210 Query: 174 QHRPAL-ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 +H + + + +L+ I +Y G T+ A++ L + +R+ L +W+ +DFE + Sbjct: 211 KHYACITDPSILKQLVNSIYTYGGHISTKNALKFVLHVPLRAGNLVSLKWAYVDFEKHLI 270 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 TIP + +K ++PLS +A+AIL++ + + +F+ D+ Sbjct: 271 TIPRKEMK----------AKSGDDFILPLSDEAIAILQEQYLYTSHKEFVFVA--DNGLH 318 Query: 293 MSENTVNSALRVMGYDTKV---EVCGHGFRTMACSSL---VESGLWSRDAVERQMSHMAR 346 + E T + AL+ MG++ + + H FR S + S +A E+ + H+ Sbjct: 319 IDEVTPSRALQRMGFNNETLGNKQRLHSFRATFRSLVDTHQMEHRSSYEAKEKVLDHIVG 378 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFI 382 + V AY KA + EE RL+L WW+ ++ + + Sbjct: 379 SGVERAYTQKAIYTEEMRLLLTWWSGYILAMMDSPL 414 >UniRef50_C8UI65 Putative integrase n=1 Tax=Escherichia coli O111:H- str. 11128 RepID=C8UI65_ECO1A Length = 352 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 105/262 (40%), Positives = 161/262 (61%), Gaps = 15/262 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++LLV PNG KYWRL+YR GK+K+LALGVYPE+TLADAR +R++A++ +A G+DP + K Sbjct: 26 LYLLVKPNGGKYWRLKYRVAGKEKLLALGVYPEVTLADARAKREDAKRGIAGGIDPMEAK 85 Query: 61 KNDKVEQSKA--RTFKEVAIEWHGTN-KKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + +K+ + TFK++A+EWH + KKWS +A +L++ ++F +G++ IAE+K Sbjct: 86 REEKIARETQLNNTFKDIALEWHSSKLKKWSAGYASDILEAFNKDVFPYIGKKPIAEIKP 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LL ++ +E G E A +++QR + RYA+ +G +YNPA ++ A+ H P Sbjct: 146 LELLNVLRRIEGRGATEKAKKVRQRCGEVFRYAIVTGRAEYNPAPDLTSAMQGHESNHYP 205 Query: 178 ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPE 237 L K +P+ + SY+G L A L ++ +R+ ELR A W EIDF +IW IP Sbjct: 206 FLTAKELPDFFKALSSYSGSALVVMAARLLIITGLRTGELRGALWDEIDFNKAIWEIPAS 265 Query: 238 REPIPGVKHSHRGSKMRTTHLV 259 R KMR H+V Sbjct: 266 R------------MKMRRPHIV 275 >UniRef50_A5PCI3 Phage integrase n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PCI3_9SPHN Length = 325 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 109/312 (34%), Positives = 173/312 (55%), Gaps = 16/312 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P G++ WR+ YRY GKQK L G +P + LADAR + D AR++LA G DPG++ Sbjct: 26 LYLEVSPTGARSWRMNYRYLGKQKTLTFGRWPAVGLADARKKCDAAREVLARGDDPGEQA 85 Query: 61 KNDK--VEQSKARTFKEVAIEWHGTNKKWSEDHAH-RVLKSLEDNLFAALGERNIAELKT 117 K ++ + A +F+ VA E+ +K + + L + ++G+R I+ + Sbjct: 86 KLERIAASVASASSFEAVAEEYLAKIEKEGRSSVTMKKKRWLIGFIDKSIGKRPISAISA 145 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP 177 +LL ++ +E G+ E A RL+ + I RYA+ +G + + ++ GA+ HRP Sbjct: 146 PELLLTLRKMEKKGKYETARRLRSTCSQIFRYAIATGRAERDVTVDLRGALIVPKAVHRP 205 Query: 178 ALELK-RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 A+ ++ LL I+S+ G P T+ A++L +F+R ELR A W+E D +A++WTIP Sbjct: 206 AITDASKVGGLLRSIESFDGHPTTQIALKLVPHVFVRPGELRHAEWTEFDLDANVWTIPA 265 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSEN 296 E+ +KMR H +PLS Q L I+ I+ +F +PMSEN Sbjct: 266 EK------------TKMRRPHAIPLSRQTLEIIASIEHDADYSRFLFPSLRSVQRPMSEN 313 Query: 297 TVNSALRVMGYD 308 T+N+ALR MGY Sbjct: 314 TINAALRRMGYA 325 >UniRef50_A0Q3W3 Phage integrase n=8 Tax=Francisella RepID=A0Q3W3_FRATN Length = 413 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 98/401 (24%), Positives = 170/401 (42%), Gaps = 33/401 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 +++ V GSK W+ +Y K K L +G YP I+L AR + ++LA G DP +K Sbjct: 28 LYIKVSKAGSKSWQFRY----KGKWLGIGSYPAISLKQARDEAFKYNQMLAGGKDPKLEK 83 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAH------RVLKSLEDNLFAALGERNIAE 114 +K + F V+ + T R L + +L NI + Sbjct: 84 --EKGKYQDNNLFSIVSAKAFETKDPSKPYGWKSEEVYNRNLSIYNRFILPSLKTFNIND 141 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ 174 ++ L ++ + +++ I YAV G++ YN A+++ Sbjct: 142 IEPYQLAGILE----TTTPSNQRKIKNLLNMIFTYAVGKGILKYNIARDIQAEKEDPKGF 197 Query: 175 HR--PALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIW 232 P + +LL I +Y G+ T+ A++L +L+ R + + +W +I Sbjct: 198 EFINPVEDKYNFSQLLNDIYNYKGQYNTKMALKLAVLVGFRPNNIVSMKWEDIQEAN--- 254 Query: 233 TIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKP 292 + + IP V S KM PLS QA +L +IK++ G + +F K Sbjct: 255 ---IDGKKIPFVFISADNMKMSRDFRQPLSKQAYKLLMEIKEYNGGFEYVFHS-LSKKKH 310 Query: 293 MSENTVNSALRV-MGYDT--KVEVCGHGFRTMACSSLVES---GLWSRDAVERQMSHMAR 346 ++ +++ ALR +GY+ K + HGFR + + W D++ +SH Sbjct: 311 ITIESLSKALRDTLGYNGTDKPKQHTHGFRKSVRTYISSIRSKYNWCSDSIRMILSHSKE 370 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER-FISPFE 386 N++ Y K + L ER MLQ WAD++D + I + Sbjct: 371 NAIDNIY-DKNDFLLERSQMLQLWADYVDDVKANSNIINID 410 >UniRef50_D2M358 Integrase family protein n=1 Tax=Rhodopseudomonas palustris DX-1 RepID=D2M358_RHOPA Length = 456 Score = 280 bits (718), Expect = 5e-74, Method: Composition-based stats. Identities = 121/421 (28%), Positives = 192/421 (45%), Gaps = 50/421 (11%) Query: 1 MHLLVHP-------NGSKYWRLQYRYEGKQKMLALGVYP-----EITLADARVRRDEARK 48 ++L V P SK WR+ YR+ G+QK ++G Y +LADAR RD+A+ Sbjct: 46 LYLFVTPDVSRPGNAASKLWRMDYRFHGRQKTYSIGPYGNGRDGTFSLADARRERDKAKD 105 Query: 49 LLANGVDPGDKKKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAH-------RVLKSLED 101 LL G DP +K+ DK +Q+ AR F + A EW K + ++ LE Sbjct: 106 LLKEGKDPSIEKQLDKHKQAAARPFAQWADEWLAKKKVEKVKRGRIVAVRDPKTVEVLEL 165 Query: 102 ---NLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY 158 + A G+ ++K D+LA +++ E GRLE R++ I YA G Y Sbjct: 166 RVGYVKARFGKLCRQDIKRPDVLAFMRSYEAEGRLETRDRVRSIGEQICDYADVEG-DGY 224 Query: 159 NPAQEMAGAVASCNRQHRP-ALELKRIPELLTKIDS----YTGRPLTRWAIELTLLIFIR 213 NP + + G + + RP E + + + I + + A+ L R Sbjct: 225 NPFRNLNGQMIANISTPRPGVTEPRDVTRVFKLISAPWTRARFGDVVGLALRFNALTIPR 284 Query: 214 SSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIK 273 + W E+D++A WT+P + K H+VPLS QALAIL+ ++ Sbjct: 285 PGMVNEMEWGEVDWDAKRWTVPAPK------------MKTGWDHVVPLSRQALAILRSVQ 332 Query: 274 QFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLV-----E 328 + G F D+ P+S NT+N LR++G DTK + C HGFRT + + Sbjct: 333 KLTGHRRYAFSCSKDA--PLSNNTLNKRLRLLGIDTKTDHCAHGFRTTFSTLSHHEEIKD 390 Query: 329 SGLWSRDAVERQMSHMARNSVRAAYIHKA--EHLEERRLMLQWWADFLDVNRE-RFISPF 385 + W D VE Q++H+ ++V Y + R ++Q WAD +D + + + P Sbjct: 391 AKAWDGDVVELQLAHLDNSTVEGLYKKHGPLALIGSRTKLMQHWADRIDHWLDPKKVMPI 450 Query: 386 E 386 + Sbjct: 451 K 451 >UniRef50_A3M3W1 Phage integrase n=4 Tax=Acinetobacter baumannii RepID=A3M3W1_ACIBT Length = 401 Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats. Identities = 79/388 (20%), Positives = 165/388 (42%), Gaps = 24/388 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 M + + P G ++L+YR+ GK + L LG YP ++L DAR++ E R LL G++P + Sbjct: 28 MSVRISPKGKIVFQLRYRFAGKAERLDLGTYPHMSLKDARIKAGEMRSLLDKGMNPKVEV 87 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + + + A TF+EV +W+ + + A ++ + E ++ +G+ + + + Sbjct: 88 RVQQQKYIDASTFEEVFNDWYESYCLKKKTSAQQIKNTFEQHVIPEVGDLPVDRITLQQW 147 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM--AGAVASCNRQHRPA 178 LA ++ + +A R+ ++++A + L++ N ++ + + Sbjct: 148 LALLEELADE-VPSIADRVLTNAKQVLKWAKKRQLLEVNVLSDIYAKEDLGIERNRGTRF 206 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L + I +L I+ P + ++L L+ R+ ELR A+ ++ D +W +P Sbjct: 207 LSDEEIKMVLMAIEESNILPKNKIFLKLCLMFGCRNGELRKAKKTDFDLNRKVWIVP--- 263 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 V ++ G K + P+ + A++ + ++ + F+ + PMS + Sbjct: 264 -----VVNNKTGKKTGREIIRPILPEMEALIVEAFEYSS-CEY-FLTNDSEETPMSHGSS 316 Query: 299 NSA-------LRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 NS LR H R A ++ SRD + + H+ + Sbjct: 317 NSLPAYLMERLRRHHDYYMKHWSLHDLRRTARTNFSA--FTSRDVAQLMIGHVMSGE-QG 373 Query: 352 AYIHKAEHLEERRLMLQWWADFLDVNRE 379 Y E+L ++ W + L + Sbjct: 374 TY-DYYEYLPQQTEAYAKWIEKLKTITK 400 >UniRef50_B5QDA8 Phage integrase family protein n=1 Tax=Salmonella enterica subsp. enterica serovar Virchow str. SL491 RepID=B5QDA8_SALVI Length = 403 Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats. Identities = 81/389 (20%), Positives = 151/389 (38%), Gaps = 19/389 (4%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + + P G ++ +YR+ GK L LGVY +++ +AR + +K L+ G +P + Sbjct: 28 LSVRISPKGLITFQYRYRFNGKPVRLKLGVYGSMSIKEARDAVEVCKKWLSEGKNPAVYR 87 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 K DK +++++ + EW T + L+ ++ G+ + ++ Sbjct: 88 KLDKKKKTESPDIATLVNEWLDTPSAKDLVKYEYWKRMLKLHVTDLYGQLIVDDMDPTHW 147 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA-GAVASCNRQHRPAL 179 A+ SG A + + +++YA++ I N + V L Sbjct: 148 EKIFLAITKSGSPVQAGNVLVKMKQVIKYALRRKRITSNSLMLLELTDVGKLPEDGERFL 207 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 I + ID + + L LL R ELR AR + D E +W IP E Sbjct: 208 NDVEIGKFWLAIDKTRMSWQNKMVMRLLLLTGCRGVELRLARKVDFDLEGRVWVIPKE-- 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF-IGDHDSHKPMSENT- 297 SK R + LS ++ LKQ+ + Y + ++F +PM+ T Sbjct: 266 ----------NSKTRKRFVRGLSELSVECLKQVFEVYPGNSIVFPPATLQEDRPMAAGTI 315 Query: 298 VNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKA 357 ++ A +V H R + + E G+ E+ + H + A + Sbjct: 316 ISLAEQVETMMDCPHWSAHDLRRTCKTKMAELGVAP-HVSEKILGHKLTGML--AVYDQY 372 Query: 358 EHLEERRLMLQWWADFLDVNRERFISPFE 386 +++ E++ WA + ISP Sbjct: 373 DYIPEQQEAADKWAQKVLDC-ASAISPLS 400 >UniRef50_D1Y2Y2 DNA integration/recombination/inversion protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2Y2_9BACT Length = 406 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 107/400 (26%), Positives = 181/400 (45%), Gaps = 45/400 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + G K W ++ G+++ + +G YP ++L +AR RD+ + GV Sbjct: 25 LYLRISTKGKKKWLIRSFVGGRERKVVIGEYPVMSLQEARRERDDRKMKARTGV------ 78 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK-WSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 ++K TF +V W +K S DH + + +E L L R +A++ + Sbjct: 79 ----SIRNKTVTFGDVFARWLKKKEKAVSPDHYKIIKRRIEMYLLPYLANRPVADISRPE 134 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRP-A 178 LL ++ G ++ A R +I+ A G + N A +++ ++ ++ A Sbjct: 135 LLEVLQHPIERGLIDTARRTGALARSILDAAADKGEVALNIAADLSRSLPEWEVRNFKSA 194 Query: 179 LELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 + + + LL ID Y R + R+A+ + F+R SELR A W+EI + W IP Sbjct: 195 FDPREVRRLLLAIDCYP-RQIVRYALRMVSYTFVRRSELRRATWAEIHEDE--WHIP--- 248 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF----YGAHDL----IFIGDHD-- 288 +K + +VPLS QAL IL +++ + IF + Sbjct: 249 ---------VVHAKKKRIQIVPLSRQALEILDAMRRIAQIRWKGQPFEDKPIFPSTRNTP 299 Query: 289 -SHKPMSENTVNSALRVMGYDTKVEVCG-----HGFRTMACSSLVESGLWSRDAVERQMS 342 M + + AL+ + HGFR MA + L E W +A+ERQ+S Sbjct: 300 SGSPYMGISAMEVALKWLVAHVPAPDTPPLIDLHGFRHMASTLLHEHH-WDHEAIERQLS 358 Query: 343 HMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFI 382 H+ R+ A Y K++ L RR M+QWWAD+LD +E + Sbjct: 359 HLKRDKTEATY-DKSKLLPLRRRMMQWWADYLDAVKEGRV 397 >UniRef50_Q31FR8 Tyrosine recombinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FR8_THICR Length = 396 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 98/392 (25%), Positives = 164/392 (41%), Gaps = 33/392 (8%) Query: 1 MHLLVHPNGSKYWRLQYR--YEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD 58 + + + P +K ++ +Y+ K L LG YP ++L AR + R+LL G+DP Sbjct: 27 LSIEIMPK-AKRFKFRYQRPVNKKINNLVLGYYPSMSLKAAREIAQQYRELLKKGIDPKY 85 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + ++KV+ F + + WSE H + E+ L G R+ A++ + Sbjct: 86 QTSSEKVD------FDHIIQLYLKKGKADWSEKHFNTTKGRYENFLKNPFGNRDAAQITS 139 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNR---- 173 D+ +++V SG A +L + A G++ +NPA + V + Sbjct: 140 FDIYNLLESVAQSGSYGTAEKLSYIISGAYSQAAILGMVKFNPAAGVMKQVTKTKKTQQM 199 Query: 174 QHR---PALELKRIPELLTKIDS-YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEA 229 H E +R+ L I + + A+ L+ L+F+RS L + D + Sbjct: 200 PHFNLTRKGESERLGRFLNDIKALNKTNIAVKTALLLSPLLFMRSGSLASLKLESYDKDN 259 Query: 230 SIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDS 289 I E K + +VPLSTQA+ +L+ + +F Sbjct: 260 KWLLINAEDMK-----------KDHSDFIVPLSTQAINLLETLIAATKPKIYVFESRASK 308 Query: 290 HKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSV 349 + +N A G+ +V HG R A + L E G + + E Q+ H V Sbjct: 309 LGHIRIEAINKAKSRSGWRFD-DVTIHGLRHTATTYLTEIG-FDYEVTEMQLHHKLVG-V 365 Query: 350 RAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 R Y +KA HL++RR M+Q WAD+LD R Sbjct: 366 RGIY-NKAMHLDKRREMMQKWADYLDNLRNGI 396 >UniRef50_D1D4Y4 Site-specific recombinase n=19 Tax=Neisseria RepID=D1D4Y4_NEIGO Length = 406 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 102/384 (26%), Positives = 184/384 (47%), Gaps = 38/384 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V+P G + W+L + +G+Q+ ++LG YP+ +LA+AR R+E R+ A+G + +KK Sbjct: 39 LALWVYPTGRRSWKLSFMQDGRQQTISLGRYPDFSLAEAREWREEVRRKRAHGENVVNKK 98 Query: 61 KNDKVEQSKARTFKEVAIEWHGT-NKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 F++VA +W +K SE +A +V+++ E +F A+G +I +++T D Sbjct: 99 ------VRADFAFEKVARDWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTAD 152 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEM-AGAVASCNRQHRPA 178 ++ ++ +E G ++ + + + +AV SG++D NP ++ +G ++ A Sbjct: 153 VVGCLRVMEARGIVDTLRKTKNSLKMVFAFAVGSGMMDINPVAQIGSGVFERVKTKNMTA 212 Query: 179 LELKRIPELLTKIDSYT----------GRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 L +P L+ ++ P+TR+ I LL R E WSE+D E Sbjct: 213 LSPSELPRLIDFLEQRNEFAVYAGRVHIHPVTRFCIYWLLLTMTRIREAALMEWSELDGE 272 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD 288 +W IP ER K R H VPLS +L Q + +F + Sbjct: 273 --VWRIPAER------------KKERRGHDVPLSRAMRWVLDQARGLNVNGRFVFESV-N 317 Query: 289 SHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 +++ + + A+R G DT HG R++A + L E D E+ ++H Sbjct: 318 FQGHINKESPHVAMRRSGLDT----TAHGLRSLARTYLREVLKVYNDVAEKLLAHSLGTR 373 Query: 349 VRAAYIHKAEHLEERRLMLQWWAD 372 + AY +++E EER+ + W + Sbjct: 374 TQTAY-NRSELWEERKDAPERWGN 396 >UniRef50_A3WKP7 Site-specific recombinase, phage integrase family protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WKP7_9GAMM Length = 411 Score = 277 bits (708), Expect = 6e-73, Method: Composition-based stats. Identities = 81/402 (20%), Positives = 154/402 (38%), Gaps = 42/402 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGV-YPEITLADARVRRDEARKLLANGVDPGDK 59 ++ + G+ W ++Y Y GK+K + L YP +LADA+++ R + NG+DP + Sbjct: 24 LYFRIEQ-GTASWFVRYTYAGKRKTITLSEGYPNCSLADAKIQAAAIRSKVKNGIDPQLE 82 Query: 60 KKNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRD 119 ++ + T ++ +W K H + + L + LG+ ++ ++ D Sbjct: 83 RR--RETGGAIHTVHDLFNDWFDRAVKNRVKHPGNDERVYRNYLKSRLGKYSLKDITPID 140 Query: 120 LLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCN-RQHRPA 178 + + ++ +G ++R + + ++ L+ NPA G + + Sbjct: 141 VRNVLDELQQTGNKTTSSRALSIMKRMFNHGIKLNLVSSNPAIYFTGVDVGQDYSPRERS 200 Query: 179 LELKRIPELLTKIDSYT--GRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 L I + A L L + R SE+ +RW +ID E W P Sbjct: 201 LSADEIKTAFSVFRKQQDIFTRDNYLACLLLLHLGCRKSEIISSRWEQIDLEDQTWFFPE 260 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK--PMS 294 K VP+ Q L +++++K + +F S + +S Sbjct: 261 N--------------KTSKPITVPIPNQMLPVIEELKVRCAGSEYVFPSRRRSKRRGYIS 306 Query: 295 ENTVNSALRV----------------MGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVE 338 ++T+N AL +G H R + L + + E Sbjct: 307 DDTLNHALAKLFGQKVDSKKQPYPNVLGSAGVDHFTVHDLRRTYRTLLAKLKV-PDAIAE 365 Query: 339 RQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 R ++H R V Y ++ ++LEERR ADFL+ + Sbjct: 366 RCLNHELRG-VLKVY-NQYDYLEERREANAKVADFLEPLIQG 405 >UniRef50_D1R6D1 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R6D1_9CHLA Length = 464 Score = 277 bits (708), Expect = 7e-73, Method: Composition-based stats. Identities = 80/411 (19%), Positives = 147/411 (35%), Gaps = 48/411 (11%) Query: 1 MHLLVHPNGSKYWRLQYRYE-----GKQKMLALGVYPE-------ITLADARVRRDEARK 48 + L V P GSK W Y +++ LG + +++ AR + + Sbjct: 56 LVLRVKPTGSKSWIFCYTVPCHKRKWRERKKGLGCFKGGRTGVAGVSVKTARTEAERMKH 115 Query: 49 LLA-NGVDPGDKKKNDKVE----QSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNL 103 + NG DP + K+ E Q+ K++ W T+ +D + + ++ Sbjct: 116 EVRHNGADPVEDKRKRAAEVIREQASRVLVKDLFERWANTDLVNRKDKGAEARRMMLKDV 175 Query: 104 FAALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQE 163 ++GE NI E++ + + G +A + + R+AV L++++P Sbjct: 176 IPSIGELNIKEVRKGHITEITDQLLQRGVNRMAKVVFSLIRQMFRFAVTRDLLEFDPTAA 235 Query: 164 MAG-AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARW 222 ++ + N + L I EL K+ S AI L L R EL ARW Sbjct: 236 ISKTTIGGANVERDRVLSEDEIQELGIKLSSAGMADTATIAIWLVLGTCCRIGELLKARW 295 Query: 223 SEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLI 282 S DF +W IP E SK H++ LS ++ Q+K G + Sbjct: 296 SHFDFNRKLWRIPSE------------NSKNDREHIIFLSLFTFSLFTQLKAITGEGEWC 343 Query: 283 FIGDHDSHKPMSENTVNSAL----------------RVMGYDTKVEVCGHGFRTMACSSL 326 F + T+ + ++ H R + + Sbjct: 344 FPASRLDDHHVCPKTITKQITDRQRSLPNLKNRTKNNAALMLSRGLWKPHDLRRTGATLM 403 Query: 327 VESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 G+ + ER ++H N V+ Y + + E ++ + + L+ Sbjct: 404 TALGVLP-EVAERCLNHTEENRVKRIY-QRHTYESEMKMAWEKLGNHLEKL 452 >UniRef50_Q8DF52 Phage integrase n=1 Tax=Vibrio vulnificus RepID=Q8DF52_VIBVU Length = 452 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 95/431 (22%), Positives = 184/431 (42%), Gaps = 67/431 (15%) Query: 1 MHLLVH----PNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGV 54 ++L + K W+ Y + K+ L +G YP +TL DAR + + +LL + Sbjct: 31 LYLRLRLGKNKKTKKSWQFNYHHPLTKKRIKLTIGNYPALTLKDARKKAENYLELLEKNI 90 Query: 55 DPGDKKKN--DKVEQSKARTFKEVAIEWH------GTNKKWSED---------------- 90 DP + ++ R FK+VA +W KK E Sbjct: 91 DPQEYERTGGINAIDPDKRLFKDVAEKWFEEKILAEDKKKRQEKIDDANKRAKDEGREKA 150 Query: 91 -------------HAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEVAA 137 ++ + L++++ ALG I +++T ++ G Sbjct: 151 SEQELEAVLRDIRYSKDIRGRLDNHILPALGNIPITKMETYLAQEALQPSYAKGIN--MD 208 Query: 138 RLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSYTGR 197 ++ Q ++ +M YA + G + NP +++ + +Q +P+++ + + EL+ + Sbjct: 209 KICQISSRVMGYAKKLGYMKSNPLSDLSEVFVNKRKQKQPSIKPEGLSELMKAMGERNIT 268 Query: 198 PLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTH 257 +TR E+ + R+SE+ RW E+DFE ++ IP R K H Sbjct: 269 KVTRAGFEMQMHTLARASEIAKMRWDEVDFENNLIKIPSYR------------MKRLNEH 316 Query: 258 LVPLSTQALAILKQIKQFYGAHDLIFIG-DHDSHKPMSENTVNSALRVMGYDTKVEVCGH 316 +PL+ +L+ +K F + +F S M++ ++N+ L+ G+ K E+ H Sbjct: 317 FIPLTKYTRGLLEYLKPFSSHLEYVFPADPRSSRPHMNQQSINANLKRAGF--KGELVSH 374 Query: 317 GFRTMACSSLVESG------LWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWW 370 GFR M + L +S + D +E ++H + +R Y + AE++E RR +L++W Sbjct: 375 GFRHMGSTFLNDSKKYGANEKFDADVIEACLAHCDNDKIREIY-NSAEYIEMRREILEFW 433 Query: 371 ADFLDVNRERF 381 D++ + Sbjct: 434 GDYIVEQTANY 444 >UniRef50_Q21D10 Phage integrase n=3 Tax=Alphaproteobacteria RepID=Q21D10_RHOPB Length = 429 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 99/406 (24%), Positives = 174/406 (42%), Gaps = 51/406 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L + GSK W +Y+ G+ LG ++ L +AR + ARK+ NG DP K Sbjct: 28 LYLQIAEGGSKSWLFRYKLHGRTHWHGLGSLRDVGLEEAREKATGARKVRRNGGDPIQAK 87 Query: 61 KN----DKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSL----------EDNLF 104 + ++E +KA TF E A + N+ + HA + + +L +++ Sbjct: 88 RQAEAAARIEAAKAITFGEAAKRFIKANRAGWKNAKHADQWVMTLLGVDQKGKPSKNDYC 147 Query: 105 AALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSG-LIDYNPAQE 163 + + I + T +L I+ + S + E A R++ R ++ A G NPA+ Sbjct: 148 KTIRDLPIGAIDTTLVLRIIEPIWAS-KTETATRIRSRIEQVIDAAKAKGEFNGENPARW 206 Query: 164 -------MAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSE 216 + ++ PAL +++P+ + K+ G A+E +L +R Sbjct: 207 KGHLDNLLPATSKVRKVRNHPALPYRQLPDFMRKLRERDG--AAAAALEFQILTAVRPGN 264 Query: 217 LRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY 276 A+W +ID + S+WTIP K H VPLS ALA+L +++ Sbjct: 265 AVAAKWDQIDRQTSVWTIPAAL------------MKSDAEHRVPLSKAALAVLDRMEATK 312 Query: 277 GAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTK--------VEVCGHGFRTMACSSLVE 328 + IF KP+S+ ++ + + M + E+ HGFR+ E Sbjct: 313 DDSEYIFPNTK--GKPLSDASMAAVIDRMNELERRWIDPKLDREIVPHGFRSSFRDWAAE 370 Query: 329 SGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 G + E ++H + V AAY + L+ R M++ WAD+ Sbjct: 371 HG-YDDPVAEAALAHKVSDEVVAAY-RRTTFLDLRNRMMEDWADYC 414 >UniRef50_C6E138 Integrase family protein n=1 Tax=Geobacter sp. M21 RepID=C6E138_GEOSM Length = 433 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 87/413 (21%), Positives = 159/413 (38%), Gaps = 60/413 (14%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 + V P+G K W Y GK++ + LG YP++TL AR R + A+K++ NG+DP D K+ Sbjct: 33 IRVMPSGFKSWLYLYAINGKRRCMGLGHYPDVTLETARDRFEAAKKMVKNGMDPLDAKEE 92 Query: 63 DKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 ++ + KA T K++ ++ + K E + + N+ G+R +K RD Sbjct: 93 EQEQHRKALTVKQLFDDYLVRHAKLNKRESSWREDERLFKVNVEPEWGKRKAEHIKKRDC 152 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 + + + + + T + +AV+ ++++ P + V L Sbjct: 153 IELLDKYADR--PALCHNVMKLTRKLFNFAVEKDILEHTPFTGVKVPVEL--ESRERILT 208 Query: 181 LKRIPELLT-KIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 I +L ++ + I+L LL R E+ +E+D + WTIP ER Sbjct: 209 DTEIKKLWRTELPKAAISDEVKQIIKLLLLTGQRVGEVCGITVNEVD--GNWWTIPQER- 265 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH--------K 291 SK TH V L+ A+ +L + + F + K Sbjct: 266 -----------SKNGQTHRVYLTDTAIKLLGK-----SINGYYFPSPVVKNDSDGKPVFK 309 Query: 292 PMSENTVNSALRVMGYDTKV-----------------------EVCGHGFRTMACSSLVE 328 + EN V A+R D + H R +SL + Sbjct: 310 HIDENAVAYAIRKNLKDYQPRRPIKGDRISMVQVPEEKKMSIAHFTPHDLRRTFSTSLAK 369 Query: 329 SGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 G ++ + ++ M H + ++ ++ ++ E+R L W L Sbjct: 370 LG-FNDEIIDAVMGHKKQGVIK--IYNRHKYDTEKRQALVAWEKRLLSLTSDE 419 >UniRef50_A6VNS1 Phage integrase family protein n=7 Tax=Pasteurellaceae RepID=A6VNS1_ACTSZ Length = 427 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 106/398 (26%), Positives = 179/398 (44%), Gaps = 27/398 (6%) Query: 1 MHLLVHPNGSKYWRLQYRYE--GKQKMLALGVYPEITLADARVRRDEARKLLANGVDP-- 56 + L + PNG+K W Y K+ +G YP ++LADAR + E R+LLA +DP Sbjct: 31 LRLAIKPNGTKTWLFNYTKPYIKKRTDKTIGQYPSVSLADARAKAHEFRELLAKNIDPHQ 90 Query: 57 GDKKKNDKVEQSKARTFKEVAIEWH-------GTNKKWSEDHAHRVLKSLEDNLFAALGE 109 + +K + + TF VA EW K +SE ++ + ++ LG+ Sbjct: 91 NEIEKEKQERLPMSNTFSHVANEWLVYREKIGMERKDYSEKTKTDTIRRV-NDAIEILGD 149 Query: 110 RNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVA 169 + ELK + LA + A G+ + +I YA + G D N + + + Sbjct: 150 TSFKELKLQHGLALLDAHRTRGQYTEMKKRLFVLKSIAEYAERFGYWDRNEWRYLGEDLP 209 Query: 170 SC-NRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 S +H A+ K +PE L ++ + AI LL R+SE A++S+I Sbjct: 210 SPDKNKHFAAIHYKELPEFLFELRKANIHYSSLLAILWGLLNVTRASETVGAKFSDISEN 269 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD 288 ++ P E + ++G K HL+PLS QA +L I++ D +F + Sbjct: 270 ENL---PGE---LVLTVQVNKGGKGARDHLIPLSRQAGKLLTFIRK-NSTSDYLFPAAYK 322 Query: 289 SHK--PMSENTVNSALRVMGY-DTKVEVCGHGFRTMACSSLVE---SGLWSRDAVERQMS 342 + ++ T N ++ MG K + HG RT+ S + + +E +S Sbjct: 323 RGRLVHINPQTPNDVIKSMGAGKYKGIMTNHGMRTLFSSYCNDNRLELGLDPEIIEICLS 382 Query: 343 HMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER 380 H+ + VR AY ++AE+L R LQ WAD++++ + Sbjct: 383 HLNGDKVRNAY-NRAEYLPYRLKTLQAWADYVELCAKG 419 >UniRef50_Q39TC0 Phage integrase n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TC0_GEOMG Length = 414 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 90/398 (22%), Positives = 146/398 (36%), Gaps = 50/398 (12%) Query: 6 HPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKNDKV 65 +P G+K + Y GK+K L LG YPE+TL DAR++ EA L NG DP Sbjct: 39 NPKGTKTFLYIYTINGKRKELKLGNYPEVTLKDARIKHGEAYARLVNGEDPVTPPVIKAE 98 Query: 66 EQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPI 124 Q + TF + +K S + + +L + IA +K RD +A + Sbjct: 99 PQDENLTFGHFTELYLQWSKDNHSPKWHNTIKCALNKDALPVWEYTLIASIKRRDAIAFL 158 Query: 125 KAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVAS--CNRQHRPALELK 182 + V G L + T+++ YA++ I+ NP + + L Sbjct: 159 ENVARRGI--QVINLHKATSSVFDYALEREYIESNPMAGLKAKTIPALKPKARERFLSDS 216 Query: 183 RIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSE-----------IDFEASI 231 I + ID G T+ A++L ++ R E+ E I Sbjct: 217 EIKHVWKAIDEGPGYDETKRALKLIMVTAQRPGEVAAMHRREIQTGVGKPRCKICKRCGW 276 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHK 291 WTIP ER K H + L+ AL ++ A IF D + Sbjct: 277 WTIPAER------------MKNGEEHRIYLTPTALELI------GDAEGYIFPSPQDG-Q 317 Query: 292 PMSENTVNSALRVMG------------YDTKVEVCGHGFRTMACSSLVESGLWSRDAVER 339 P++ N+++ + Y E H R A + L G+ + E Sbjct: 318 PINRNSLSQLVSRERNNKKPNGEMYPPYYGLPEWTPHDLRRTARTLLARVGV-PEEHAEE 376 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 +SH V ++ +++EE++ L L Sbjct: 377 VLSHKKEGLVDR--YNRHDYMEEKKEALIKLEAELMKL 412 >UniRef50_B5KC37 Putative phage-related integrase n=1 Tax=Octadecabacter antarcticus 238 RepID=B5KC37_9RHOB Length = 385 Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats. Identities = 86/386 (22%), Positives = 151/386 (39%), Gaps = 39/386 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V +G+K W + R+ G+ G YP++TLA+AR++ +++G+ Sbjct: 34 LGLRVATSGTKSWFMMRRFNGRMLRTTFGRYPDLTLANARLKAPNVLADMSDGL------ 87 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 Q K FK V EW ++ + H+V ++ + A G +A + RD+ Sbjct: 88 ---TQGQRKTDLFKVVLDEWLKKDQAKN-KSVHQVRVAMYKHALPAFGPMPVASITKRDV 143 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 I + +G A R+ T + + +++ +PA+ + S + L Sbjct: 144 NRLIDKIVDAGSPVAANRVLAFTKRFFSWCKERDILELSPAEAIRP--PSKEKTRDRVLT 201 Query: 181 LKRIPELLTKIDS--YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPER 238 L+ I D Y P+ +L LL R E+ A W E+ +P R Sbjct: 202 LEEIKGFWAACDQMGYPWGPI----FQLLLLTGARLREVSQASWGEVSIADGTLNLPARR 257 Query: 239 EPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTV 298 +K H + LS QA+ I++ + + G DLIF + +S Sbjct: 258 ------------TKNGRAHQIQLSDQAINIIQALPKVEGQ-DLIF--TTNGTTAVSG--F 300 Query: 299 NSALRVMG-YDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN--SVRAAYIH 355 + + + + H R + E S ++ ++H+ V A Y H Sbjct: 301 SKVKKRLDIISGVADWRFHDLRRSFATHSTERLGISPVVADKILNHVTGQVRGVAAIYQH 360 Query: 356 KAEHLEERRLMLQWWADFLDVNRERF 381 E+LEERR LQ W +F+ Sbjct: 361 -GEYLEERRASLQKWGNFIQGLIADE 385 >UniRef50_B4SNF6 Integrase family protein n=2 Tax=Proteobacteria RepID=B4SNF6_STRM5 Length = 397 Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats. Identities = 104/384 (27%), Positives = 178/384 (46%), Gaps = 34/384 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V + +K W +YR+EGK+ + LG I LA+AR ARK++ +G DP + Sbjct: 28 LYLQVTASCAKSWVFRYRFEGKRPEMGLGPLHVIGLAEAREAAGAARKMVQSGQDPLAGR 87 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 + V + TF E A + + + HA + ++LE LG+ + ++T Sbjct: 88 RAAAVATASIPTFWEAATAYIAEREAGWTNPKHAGQWTRTLETYAKPVLGDLRVDRIETE 147 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYA-VQSGLIDYNPAQE-------MAGAVAS 170 +LA ++ + + + E A+R++QR A++ VQ NPA+ + A Sbjct: 148 HVLAVLRPIWTT-KTETASRVRQRMEAVLDAVTVQKKRSGENPARWRGHLAVILPKPTAV 206 Query: 171 CNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEAS 230 ++ AL +P + + S G A+E T+L R+ A E+D A Sbjct: 207 TKVENFAALPYAELPSFMAALRSRHGE--AARALEFTILTAARTGMTLGATPGEVDLAAG 264 Query: 231 IWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSH 290 WT+P R K + H VPLST ALA+ + + DL+F D + Sbjct: 265 TWTVPGSR------------MKAKVEHTVPLSTPALALARPRIKR----DLLFPNDLSN- 307 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 +P+SEN + + L+ MGY + HGFR+ E + D E ++H R+ + Sbjct: 308 EPLSENAMLALLKRMGYGY---ITVHGFRSTFKDWASEMTDYPDDLSEAALAHRIRDKAK 364 Query: 351 AAYIHKAEHLEERRLMLQWWADFL 374 AAY + +++RR ++ WA++ Sbjct: 365 AAYK-RGTMIQKRRELMNSWAEYC 387 >UniRef50_B4T1L5 Phage integrase family protein n=12 Tax=Enterobacteriaceae RepID=B4T1L5_SALNS Length = 409 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 88/394 (22%), Positives = 155/394 (39%), Gaps = 23/394 (5%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + + + G+ + ++R+ GKQ + +G YPE L AR + +LA G +P ++ Sbjct: 28 LWVRISKKGAVTFFYRFRFLGKQDKMTIGNYPEFGLKAAREEVTKWAAILARGENPRIRQ 87 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 DK + + TF+E+ EWH E + ++L+S E ++F LG+ +L + Sbjct: 88 SLDKAKINSQYTFEELFREWHAMVCVQKE-TSDQILRSFELHVFPKLGKYPAHQLTLHNW 146 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMA-GAVASCNRQHRPAL 179 L + + G E+ R+ +AV+ L++ NP EM+ + L Sbjct: 147 LTVLDRL-AQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKMGERTL 205 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 + K I + I+ + +L+L+ R ELR A S DFE +WT+P E Sbjct: 206 DRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSHFDFEEGVWTVPWE-- 263 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIF------IGDHDSHKPM 293 + G K + + P+ + L ++++ + +F H + Sbjct: 264 ------NHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPG-RFVFSKYADKPMSEGFHMSI 316 Query: 294 SENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAY 353 S N V L+ H R A ++ E E + H V + Y Sbjct: 317 SSNLVKFMLKAYNEQ-VPHFTIHDLRRTARTNFSELTE--PHIAEMMLGHKLPG-VWSVY 372 Query: 354 IHKAEHLEERRLMLQWWADFLDVNRERFISPFEY 387 K ++EE R W L E + F Sbjct: 373 -DKYTYIEEMREAYSKWWARLMSIIEPDVLEFTP 405 >UniRef50_Q98MP8 Probable prophage integrase n=2 Tax=Proteobacteria RepID=Q98MP8_RHILO Length = 402 Score = 273 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 88/399 (22%), Positives = 173/399 (43%), Gaps = 42/399 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEIT---LADARVRRDEARKLLANGVDPG 57 ++ + P+G +W ++Y +G+++ ++L T L + + R+ + G+DP Sbjct: 25 LYFFIAPSGRPFWAIRYMLKGRRRQMSLTDSIPATVRELKQIELLSETEREKVRKGIDPL 84 Query: 58 DKKKNDKVEQSKAR----TFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERN 111 +++ K + TFK VA+++ N+ + H + +L ++ +G Sbjct: 85 AEREAAKAASPEPVRQLVTFKSVALDYIAANRGGWKNAKHVQQWENTLATYVYPVIGHLE 144 Query: 112 IAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID--------YNPAQE 163 + T ++L ++ + + + E A+R++ R I+ A G+ + +NPA+ Sbjct: 145 PQSITTAEVLKILQPLWAT-KRETASRVRSRVETIIGAAKAKGMSEKPEIWANHHNPARW 203 Query: 164 MAGAV----ASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRF 219 + H A+ IP I A++ +L R++E Sbjct: 204 ADNLEFWLNGKQEKNHFSAMPYPEIPAFAQSIAEREDYST--KALQFLILTATRTNETLG 261 Query: 220 ARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAH 279 A WSEID E ++WTIP R K H VPLS++AL ++ + + G + Sbjct: 262 AEWSEIDTEKAVWTIPASR------------MKSGKEHRVPLSSEALKLVASLLRIEG-N 308 Query: 280 DLIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVER 339 +F G +K +S + +R + HGFR+ E ++ VE Sbjct: 309 PYLFPGAI-RNKSLSNMALLMVMRGLK---LGHYVPHGFRSAFRDWAAEETVYPNHIVEM 364 Query: 340 QMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNR 378 ++H +N V AAY + + +E+RR +++ W+ +L R Sbjct: 365 ALAHTIKNKVEAAY-RRGDLMEKRRQLMEDWSAYLASAR 402 >UniRef50_A5ELC2 Putative prophage integrase n=2 Tax=Bradyrhizobium RepID=A5ELC2_BRASB Length = 408 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 92/400 (23%), Positives = 170/400 (42%), Gaps = 32/400 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLA--DARVRRDEARKLLANGVDPGD 58 ++L+V P+G + W +Y+ G K + G E L +AR + +A +LLA G DP + Sbjct: 29 LYLIVTPSGGRRWAFRYQRNGIVKKMGFGSAKETGLKLSEARDKAIDALRLLAKGTDPRE 88 Query: 59 KKKNDKVEQSKARTFKEVAIEWHGTNK-KWSEDHAHRVLKSLEDNLFAALGERNIAELKT 117 + ++K +R F E A EW T + A LK + + L + + E++T Sbjct: 89 HRDDEKRRTQGSRRFGEFAEEWRQTYETGMRHKAARAKLKRIVQVICRPLHKHWVHEIET 148 Query: 118 RDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQEMAGAVASCNRQHR 176 ++ + + E + +Q I+ A+ L NPA + RQ R Sbjct: 149 AHVVNVLMPIWQQ--PETSRSARQIIKKILDAAIAHNLRPKDNPADWASRLQPIMPRQRR 206 Query: 177 P--------ALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFE 228 A++ + +P + K+ + A+E+ +L R++E++ RW+++D + Sbjct: 207 RGTIRGGHKAMDYQDLPAFMHKL--SAISTQSARALEVIILTLGRTAEVQTMRWAQLDLD 264 Query: 229 ASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHD 288 IW + G+K PL Q LA L++ + +F G Sbjct: 265 NGIWDL------------GFLGTKNERLKRTPLPRQTLAYLREAYDSRVNDEFVFPG-RS 311 Query: 289 SHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNS 348 +PMS T+ L+ + + HGFRT + E + + VE + H+ + Sbjct: 312 LKRPMSNMTMLKYLKEL--TGDDSLTVHGFRTTFRTWAQEQTHFEEEIVEHCLHHITGDD 369 Query: 349 VRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFEYA 388 AY + E L++R ++Q +AD+ ++P + A Sbjct: 370 AEKAYK-RGEALKKRLHVMQTFADYATQPPRSNVTPMKVA 408 >UniRef50_Q3J1E6 Possible phage-related integrase n=2 Tax=Rhodobacter sphaeroides RepID=Q3J1E6_RHOS4 Length = 413 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 83/409 (20%), Positives = 163/409 (39%), Gaps = 44/409 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L+V P G K W+++YR+ G + ++LG +P ++LA AR R + + G DP + Sbjct: 28 LYLIVQPTGKKGWQVRYRHGGVHRRMSLGAFPVLSLAGARERARQTLAAASAGTDPAAEV 87 Query: 61 KNDKVEQSKART--FKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTR 118 K K + K + ++ + + A V + LE ++ +A GER++ ++ R Sbjct: 88 KAAKAPKLDGDRDKIKTLIGQFDKRHLSKLKSGAV-VRRELERHVVSAWGERDVHQIGKR 146 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPA 178 D++ + + SGR+ A R++ + V+ ++ +PA + A Sbjct: 147 DVIDLLDGIADSGRVVTANRVRAYLAKFFGWCVERDILATSPAAGVKPA--GKETSRARV 204 Query: 179 LELKRIPELLTKIDS--YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPP 236 L I T ++ + P + LL R +E+ SEI +W + Sbjct: 205 LTDDEIRWFWTACEAEGFPWGPFGKV----LLLTGQRLNEVAQMTDSEI--RGDLWHLTA 258 Query: 237 EREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLI-FIGDHDSHKPMSE 295 +R +K H VPL+ A L ++++ + FI P+S Sbjct: 259 DR------------TKNGRAHDVPLTGAVRAALDEVERVTDEEGRVRFIFTTTGRTPVSG 306 Query: 296 NTVNSAL----------RVMGYD-TKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHM 344 A+ + G H R A + + G+ E ++H+ Sbjct: 307 FFKARAVLAEAMVGIAQKERGEPVEIPRWTFHDLRRTAATGMARLGI-PVRVTEAVLNHV 365 Query: 345 A--RNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRER---FISPFEYA 388 + + A Y + ++ +E+R L+ WA F+ E + ++ Sbjct: 366 SGTGGGIVAVY-QRHDYADEKRQALEAWARFVLSLVEGEADNVVRLQHG 413 >UniRef50_Q1GUV7 Phage integrase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GUV7_SPHAL Length = 403 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 176/404 (43%), Gaps = 42/404 (10%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 + L V G+ W L+ + +GK++ + LG +TLA+AR + E RK + V+ D Sbjct: 25 LFLKVGKTGAASWLLRLQRDGKRQDIGLGSAKLVTLAEARAKAAELRKAVK--VEKRDVL 82 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSED--HAHRVLKSLEDNLFAALGERNIAELKTR 118 K E++ TF+E A ++H N+ + + + L SLE+ F LG+ + Sbjct: 83 TERKDEEAAKVTFREAATQYHSENEAGWKSDVYGRQWLASLENYAFPKLGDMTTGGITAA 142 Query: 119 DLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-----NPAQEMAGAVASCNR 173 D+++ + + E A +++ R A++ Y+ G N + + + + Sbjct: 143 DIISVLTPIWQE-IPETARQVRNRICAVLDYSHAKGWRSSEAPSGNSSLKAGRGLPRQIK 201 Query: 174 Q--HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASI 231 + +R A+ +P LT + +R A++L +L +RS E+R A+W E D + + Sbjct: 202 KPANRKAMPYVAVPPFLTALRRKPSY--SRLALDLLILTGVRSQEVRLAKWDEFDLDQRL 259 Query: 232 WTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFY-GAHDLIFIGDHDSH 290 WTIP E K H+VPLS ALA+L + +++F G Sbjct: 260 WTIPAEH------------MKRSRAHIVPLSEAALAVLVKADAMRLEGAEVVFPGMT--G 305 Query: 291 KPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVR 350 K MS T+ +R M + HGFR+ G + VE ++H ++V+ Sbjct: 306 KAMSNMTLLKVMRDM----QEPFHVHGFRSSFTDWAANEG-FPNAVVEAALAHKTPDAVQ 360 Query: 351 AAYIHKAEHL------EERRLMLQWWADFLDVNRERFISPFEYA 388 AAY + +L R +++ W ++ +P Sbjct: 361 AAY-RRTTYLGTPDNPGARVKLMEAWGNYCAGTAGAN-TPINEG 402 >UniRef50_A6U968 Phage integrase family protein n=2 Tax=Rhizobiales RepID=A6U968_SINMW Length = 391 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 95/388 (24%), Positives = 181/388 (46%), Gaps = 36/388 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYP----EITLADARVRRDEARKLLANGVDP 56 + L +G++++ Y G+++ + LG Y +++LA AR + +E R +L G DP Sbjct: 25 LWLHTSSSGNRHFVFIYIRHGRRREMGLGTYGTGTGQVSLAAARTKAEEIRTILGRGGDP 84 Query: 57 GDKKKNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 + ++ E+ K TF + A + + +E H + +L + A+ + +AE Sbjct: 85 FTEM-GERQEKVKPTTFGQCADDLVDAMESQWRNEKHRAQWRMTLTEYA-KAIRKLPVAE 142 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE------MAGA 167 + T D++ +K + + + E A+RL+ R ++ +A GL NPA+ + Sbjct: 143 VTTDDVVRVLKPIWST-KAETASRLRGRIEKVLDHAKVRGLRTGENPARWKGHLDHILPK 201 Query: 168 VASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDF 227 R H A+ +P + KI +G + A+E T+L R+ E A+W+E DF Sbjct: 202 AGKLKRGHHAAMPYADVPAFIKKIREASG--VGARALEFTILTASRTGETMGAKWAEFDF 259 Query: 228 EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH 287 ++WT+P ER K H VPL+ + LA+L ++K+ +D +F G Sbjct: 260 RENVWTVPAER------------MKGGREHRVPLTDRVLAVLTEMKKRSV-NDFVFPGSK 306 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 ++ P+S T+ ++ D HGFR+ E + + E ++H+ + Sbjct: 307 -ANTPISNMTMTKVMKTYEADA---FTVHGFRSAFRDWASEETEFQGEVAEAALAHITGD 362 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLD 375 AY + + LE+RR +++ W + + Sbjct: 363 ETERAY-RRGDVLEKRRKLMEAWETYCE 389 >UniRef50_Q7V8P5 Phage integrase n=3 Tax=Cyanobacteria RepID=Q7V8P5_PROMM Length = 422 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 105/405 (25%), Positives = 176/405 (43%), Gaps = 46/405 (11%) Query: 1 MHLLVHP---NGSKYWRLQYRYEGKQKMLALGVYP----EITLADARVRRDEARKLLAN- 52 +++LV P +G K + + R GKQ + +GV+ + TL AR R Sbjct: 26 LYVLVEPVKGSGGKSFVGKMRSNGKQIDVRIGVFGKGPGQWTLKAARDEWFRLRSWYRET 85 Query: 53 GVDPGDKKKNDK---VEQSKARTFKEVAIEWH---GTNKKWSEDHAHRVLKSLEDNLFAA 106 G DP + +K++K +QS +T E+ + T K SE L + + A Sbjct: 86 GRDPRELQKDEKRQLAKQSSDQTLNELVDSYLIACKTKYKQSETTIKDKKNKLSNEIIPA 145 Query: 107 LG-ERNIAELK----------TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGL 155 LG ++ L + ++E G L A ++ + YA++ G Sbjct: 146 LGGSTPVSRLGWDEKSKGRTGREAVFEITDSIEKRGSLNQARKVLGVMRHLFDYAIERGW 205 Query: 156 IDY--NPAQEMAGAVASCNRQHRPALELKRIPELLTKIDSY--TGRPLTRWAIELTLLIF 211 ++ NPA + A QH P L +P+LL ++ G + AI+L L+ F Sbjct: 206 MERGQNPAVQARSVGAGHEVQHNPCLSWDELPQLLDDLNRNKGNGSQVVLAAIKLDLMTF 265 Query: 212 IRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQ 271 +R L RW E+D+ A++WT+P R K H VPL+ +L Sbjct: 266 LRVGSLVPMRWDEVDYAANLWTVPGSR------------MKSGKNHWVPLTDPIKDLLAH 313 Query: 272 IKQFYGAHDLIFIGDHDSHKP-MSENTVNSALR-VMGYDTKVEVCGHGFRTMACSSLVES 329 +++ G D +F KP + E+ +N L+ +GY HG R++ ++ E Sbjct: 314 LRKINGDQDYVFWSPRGRSKPHIDESALNQHLKVRLGYGG--RQTAHGLRSLPLTAGQEV 371 Query: 330 GLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFL 374 +S + ++RQM H + VR AY K++ L+ER ++ W D L Sbjct: 372 LKFSAEVIQRQMDHAVGDKVRQAY-DKSQLLDERWKFMRAWCDAL 415 >UniRef50_Q1YTS1 Putative phage integrase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTS1_9GAMM Length = 429 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 93/419 (22%), Positives = 178/419 (42%), Gaps = 51/419 (12%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEI--TLADARVRRDEARKLLANGVDPGD 58 ++ + +G+ + ++Y+ GK +G Y ++ L AR + + R + G+DP Sbjct: 28 LYFTIKHSGAMSFGIRYQINGKTDYKGMGGYDKVHNNLGIARAKCEAYRVQIRQGIDPKI 87 Query: 59 K-------KKNDKVE--QSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAAL 107 + K++ K Q K RTF + A + + + + + SLE F + Sbjct: 88 EEQQALNLKQSAKAAEDQLKDRTFAKYAYQHIKSLEPSWTNVKTFAQWRSSLEQYAFPVI 147 Query: 108 GERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLI-DYNPAQE--- 163 GE ++++ +L ++ + + E A R+++R AI+ A+ L + NPA Sbjct: 148 GETPVSDVSRTQVLEILQPIWF-DKTETADRVRRRIAAILDAAISDDLRTERNPAIWRGS 206 Query: 164 ----------MAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIR 213 + A A + +L +P + + + G + A+E +L R Sbjct: 207 LHGKLPSVETLKKAKAPTEERAHASLHYAHLPMFMESLRAQDG--IGARALEFCILNASR 264 Query: 214 SSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIK 273 ++E+ A W E D E IW+IP R K R H +PLSTQ++A++KQ+K Sbjct: 265 TTEVLDATWGEFDLEEGIWSIPARR------------MKGRERHNIPLSTQSIALIKQLK 312 Query: 274 QFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDTKVE------VCGHGFRTMACSSLV 327 Q D +F + K +S+ ++S L+ M + + HGFR + Sbjct: 313 QL-KMSDFVFPN-RSNGKSLSQAGMSSVLKRMNKINDWKDIHGQLITVHGFRGCFKTWTT 370 Query: 328 ESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFISPFE 386 E E ++H ++ A Y K + +++RR ++Q ++D+ + Sbjct: 371 EKTDTDWLTGEMALAHKIKDKSSATY-QKGDLIDKRRRLMQKYSDYACTTPSGKVVQLR 428 >UniRef50_A5G635 Phage integrase family protein n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G635_GEOUR Length = 437 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 95/395 (24%), Positives = 158/395 (40%), Gaps = 39/395 (9%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGD-KKK 61 + V P G K W Y + GK++ L LG YP+ +L DA E+ L+ NGVDP D Sbjct: 43 IRVLPTGVKTWYYIYTFNGKRRQLNLGNYPDKSLEDAHKVYLESAALVKNGVDPMDKPVA 102 Query: 62 NDKVEQSKARTFKEVA-----IEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELK 116 D T + +A EW + SE + K+LE ++ A G+R A+++ Sbjct: 103 ADPPPPQVELTVRRLAVDLYLDEW--SKIHHSERWHYNNKKALEADVLPAWGDRLAADIR 160 Query: 117 TRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQ-- 174 +D + ++ V A + + + YAV L++YNP ++ + Q Sbjct: 161 RKDAVEILELVAKR-APGQARNVLKAARGMYTYAVDRELLEYNPFTDIKISRTIPKMQPM 219 Query: 175 -HRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWT 233 L K I L ID G T+ A++L L+ R E+ EI E WT Sbjct: 220 SRDRELSEKEIKHLWNAIDEGGGSDGTKRALKLILITGQRPGEVVGMHRQEI--EGKWWT 277 Query: 234 IPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPM 293 IP +R + H + LS A++++ IF D M Sbjct: 278 IPWQRIKTRKRRQ--------EDHRIYLSPLAMSLI------GDGKGFIF-SDPSGENSM 322 Query: 294 SENTVNSALR-------VMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 +EN ++ +R Y H R A + L G S + ++ ++H + Sbjct: 323 TENALSHHVRKDIPDTVKKPYYGLPRWTPHDLRRTAATRLSRIG-ASDEIIDVILNHAKK 381 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERF 381 V Y ++ ++ +E++ L W+ L+ Sbjct: 382 G-VSGIY-NRNKYDKEKQQWLTKWSQHLEKLINGK 414 >UniRef50_A4F5J8 Putative uncharacterized protein n=1 Tax=uncultured bacterium RepID=A4F5J8_9BACT Length = 390 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 92/370 (24%), Positives = 163/370 (44%), Gaps = 27/370 (7%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++L V P+G+ +R YRY +Q+ + LG Y EITLA AR + +A+ LA G+ P KK Sbjct: 26 LYLSVAPSGTMSFRFNYRYNNRQQTVTLGKYGEITLAQAREKLLKAKADLAAGISPAKKK 85 Query: 61 KNDKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDL 120 + K ++ +F ++ ++ ++++ L ALG+ ++ E+ ++ Sbjct: 86 QEIKNTLAE-NSFSVWLDKYTEE-CGVADSTKKMRGYAIDNYLRPALGKMSLFEITENEV 143 Query: 121 LAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQEMAGAVASCNRQHRPAL 179 A + + A + + +A G +P + + + A+ Sbjct: 144 RALAEDLVKQQAPSTALLCRMIIKNVYTFASMHGGPKLKSPTDFVRPSSIHTFKSRTRAM 203 Query: 180 ELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPERE 239 + I +L I+ + ++ A +L LL +R SE+ WSEID+ W IP ER Sbjct: 204 SPREIGYVLNGIEQSSSDISSKSAFKLILLTLLRKSEVINGVWSEIDWNEKTWRIPAER- 262 Query: 240 PIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQF-YGAHDLIFIGDHDSHKPMSENTV 298 K + H V LS QA IL ++ D IF + +KPM+ +T Sbjct: 263 -----------MKTKRPHNVYLSKQAFDILVCLRTLSTCKSDFIFPAKYGLNKPMATSTP 311 Query: 299 NSAL-------RVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRA 351 N L + G + H R A + L E+ ++ D +E ++H+ + VRA Sbjct: 312 NRLLELGMANAKKAGIE-IEPCTIHDLRRTASTLLNEA-EFNSDWIEASLAHV-ASGVRA 368 Query: 352 AYIHKAEHLE 361 Y + A++ E Sbjct: 369 VY-NVADYRE 377 >UniRef50_B3R3M6 Prophage integrase n=4 Tax=Bacteria RepID=B3R3M6_CUPTR Length = 418 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 89/397 (22%), Positives = 172/397 (43%), Gaps = 35/397 (8%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKK 60 ++ + +GS+ W ++ G+ + + LG ++LA AR + R LL +GVDP + + Sbjct: 29 LYFQISESGSRSWIFKFTLRGRSREMGLGPLASVSLAAARAEAAKCRDLLRDGVDPIEAR 88 Query: 61 KNDKVEQSKART----FKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 K + ++ + FK A ++ ++ +E HA + ++ LG++++ + Sbjct: 89 KCKQRQRMLELSGPRLFKAAAADYIAKHRAGWKNEKHAQQWTNTIATYAAPILGDQDVRD 148 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE-------MAG 166 + T ++ ++ + + + E A RL+ R I+ G + NPA+ + Sbjct: 149 IDTAMIVQVLQPIWIK-KRETAFRLRGRLECILDAEKALGHREGENPARWRGHLDKLLPK 207 Query: 167 AVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEID 226 +H PAL + IP + ++ G +E +L +R+ E++FAR E D Sbjct: 208 QNRRKKIKHHPALPWQEIPSFMKELREQRG--TAARMLEHLILTVVRTQEVQFARPEEFD 265 Query: 227 FEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGD 286 +WT+P ER KM VP++ + + +++ ++ G Sbjct: 266 MRYRVWTVPGER------------MKMELPLRVPMTDRLVELVEAALP-GARDGWLYPG- 311 Query: 287 HDSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMAR 346 KP+S + L MGY V HGFR+ + + ++ E ++H + Sbjct: 312 RKKGKPLSNMAMLKLLERMGY---GHVTVHGFRSTFRDWVADCTEYADSLAEMALAHAIQ 368 Query: 347 NSVRAAYIHKAEHLEERRLMLQWWADFLDVNRERFIS 383 N AAY + + LE RR M++ WA + I Sbjct: 369 NESEAAY-RRGDMLERRRKMMRDWAHYCSGQAAAVIP 404 >UniRef50_UPI00003841F3 COG0582: Integrase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003841F3 Length = 394 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 79/381 (20%), Positives = 146/381 (38%), Gaps = 29/381 (7%) Query: 3 LLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVDPGDKKKN 62 L V G+K + L YR G+Q+ + +G YP+ ++A AR ++ + G DP ++ Sbjct: 33 LRVTNRGAKSFILDYRIGGRQRRITIGSYPDWSVAAARTEAGNLKREVDLGNDPMGERHA 92 Query: 63 DKVEQSKARTFKEVAIEWHGTNKKWSEDHAHRVLKSL-EDNLFAALGERNIAELKTRDLL 121 D+ A T +++ + + + + E + LG+ + ++ D+ Sbjct: 93 DRA----APTMRDLWDRYKRDHLPRKAARSQADETMMWEKLVLPTLGKHKVGDVTHTDIE 148 Query: 122 APIKAV-EMSGRLEVAARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALE 180 A + + G A R+ + A++ I+ NPA + + + + L Sbjct: 149 ALHRDITVSRGTPVRANRVIEVVRRAFNLAIRWEWIEKNPASG---QLRNPEEKRQRYLS 205 Query: 181 LKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREP 240 + + L + + P++ AI + +L R SE+ A W D +A +WT P Sbjct: 206 PEELSRLSAAL-TAHHEPVSADAIRMLMLTGARKSEVLGATWEMFDLDAGVWTKPSAH-- 262 Query: 241 IPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNS 300 +K R H VP+S AL +LK+I++ +F G + Sbjct: 263 ----------TKQRKEHRVPVSANALTLLKRIRE-TAEGPYVFPGKGGDQPLTDVKRSWA 311 Query: 301 ALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHL 360 A+ H R S LV SG S + + H + + Y H + Sbjct: 312 AV--CKAADITGARIHDLRHSFASLLV-SGGASLPIIGAMLGHTQVQTTQR-YAHLYD-- 365 Query: 361 EERRLMLQWWADFLDVNRERF 381 E R +D+ E+ Sbjct: 366 EPLRAAADHVGKTIDMAGEKK 386 >UniRef50_B8GZR1 Bacteriophage P4 integrase n=3 Tax=Proteobacteria RepID=B8GZR1_CAUCN Length = 517 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 106/423 (25%), Positives = 178/423 (42%), Gaps = 63/423 (14%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPEITLADARVRRDEARKLLANGVD----- 55 ++L VH GSK W +Y +G+ + + LG ++LA+AR + AR L G+D Sbjct: 113 LYLQVHNGGSKSWIYRYTLKGRVRAMGLGPTHRVSLAEARAQAQAARLLRDQGLDPIAAR 172 Query: 56 ---------PGDKKKNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLF 104 P K + FK+ A + TN + H + +L + Sbjct: 173 AAATPPPEPPSPPKTREIAVAEAGLAFKDAAAAYIRTNSAAWRNAKHQAQWSATLATYAY 232 Query: 105 AALGERNIAELKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLID-YNPAQE 163 G+R ++E+ T +L+ ++ + + + E A+RL+ R A++ +A G NPA+ Sbjct: 233 PVFGDRPVSEIDTAMVLSVLEPIWST-KAETASRLRGRIEAVLDWASVRGHRQGENPARW 291 Query: 164 -------MAGAVASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSE 216 + +H AL IP + + + G A+E +L R+ E Sbjct: 292 KGHLDKILPAKSKIARVEHHAALPFSTIPAFMRDLGTRPG--AAARALEFAILTAARTGE 349 Query: 217 LRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQ-- 274 + A+WSEIDFEA +WT P ER +K R H VPL A+AIL +++ Sbjct: 350 VIGAQWSEIDFEARLWTQPAER------------TKTRKEHRVPLCDAAMAILASMREAF 397 Query: 275 FYGAHD-----------------LIFIGDHDSHKPMSENTVNSALRVMGYDTKVEVCGHG 317 G + IF G +S + L MG+ ++ HG Sbjct: 398 LTGRREFLLLYNKPVPDDMPLEGFIFAGMRRGKG-LSNMAMLKTLERMGH---PDLTTHG 453 Query: 318 FRTMACSSLVESGLWSRDAVERQMSHMARNSVRAAYIHKAEHLEERRLMLQWWADFLDVN 377 FR+ E+ + + VE ++H V AAY + + LE+RR +++ WA + + Sbjct: 454 FRSTFRDWAAETTGYQNEVVEMALAHAIAGKVEAAY-RRGDLLEKRRDLMRDWAAYCASS 512 Query: 378 RER 380 Sbjct: 513 TAE 515 >UniRef50_B6JEM3 Phage integrase n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JEM3_OLICO Length = 390 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 99/391 (25%), Positives = 166/391 (42%), Gaps = 39/391 (9%) Query: 1 MHLLVHPNGSKYWRLQYRYEGKQKMLALGVYPE----ITLADARVRRDEARKLLANGVDP 56 + + V GS+ W YR ++ + LG Y + ++L AR + D R+ LA G DP Sbjct: 26 LFIRVQKTGSRNWLFVYRRGQQRNEIGLGGYGQGTAPVSLPLAREKADAIRQQLARGEDP 85 Query: 57 GDKKKNDKVEQSKARTFKEVAIEWHGTNKK--WSEDHAHRVLKSLEDNLFAALGERNIAE 114 + K + TF EV + + + HA + +L L +A+ Sbjct: 86 RASRNAIKPK-----TFGEVMEQLLTAKESEWTNPKHAEQWKMTLRTYAKP-LHRLPVAD 139 Query: 115 LKTRDLLAPIKAVEMSGRLEVAARLQQRTTAIMRYAVQSGLIDY-NPAQE------MAGA 167 + D+ I R E AARL+ R A++ YA+ NPA+ + Sbjct: 140 IVMGDVKDCILPHWAE-RPETAARLRSRIQAVIDYAIAHEWRSAGNPARWGGLLEKVMPK 198 Query: 168 VASCNRQHRPALELKRIPELLTKIDSYTGRPLTRWAIELTLLIFIRSSELRFARWSEIDF 227 +R H AL P+ + + +G A+E L RS E R++ ++E+D Sbjct: 199 RQKLSRGHHAALAYADAPQTIEALRHSSG--TAARAVEFIALTVARSGEARYSTFAEVDV 256 Query: 228 EASIWTIPPEREPIPGVKHSHRGSKMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDH 287 +A WT+P ER K H+VPL+ +AL I++ ++Q D IF G Sbjct: 257 KAKTWTVPAER------------MKAGKEHIVPLTARALQIVEAMRQ-RATGDYIFGGAQ 303 Query: 288 DSHKPMSENTVNSALRVMGYDTKVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMARN 347 D KP+S+ + ALR+ HG R+ + + RD E ++H + Sbjct: 304 D-SKPISDTAMVKALRLA--SPDKAATLHGLRSTFRDWAGDKTKFPRDIAEMALAHAVGD 360 Query: 348 SVRAAYIHKAEHLEERRLMLQWWADFLDVNR 378 AY ++ L +RR ++ W +L+ ++ Sbjct: 361 ETERAY-RRSTALAQRRKLMDAWERYLNTDK 390 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.161 0.483 Lambda K H 0.267 0.0496 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,463,631,971 Number of Sequences: 3077464 Number of extensions: 105477905 Number of successful extensions: 368735 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2633 Number of HSP's successfully gapped in prelim test: 7275 Number of HSP's that attempted gapping in prelim test: 345129 Number of HSP's gapped (non-prelim): 10818 length of query: 396 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 265 effective length of database: 637,248,572 effective search space: 168870871580 effective search space used: 168870871580 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 95 (40.9 bits)