BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (209 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P75869 Protein sxy n=100 Tax=Enterobacteriaceae RepID=S... 431 e-120 UniRef50_B5XY45 DNA transformation protein Sxy n=5 Tax=Klebsiell... 206 4e-52 UniRef50_C9Y0Q1 Protein sxy n=2 Tax=Cronobacter RepID=C9Y0Q1_CROTZ 174 1e-42 UniRef50_C8Q7W7 Regulator of competence-specific genes protein n... 167 2e-40 UniRef50_C6CPM3 Regulator of competence-specific genes n=12 Tax=... 156 4e-37 UniRef50_B2VDF5 Regulator of competence-specific genes n=3 Tax=E... 154 2e-36 UniRef50_C6DKX7 Regulator of competence-specific genes n=2 Tax=P... 150 2e-35 UniRef50_A7FJS6 DNA transformation protein tfoX n=30 Tax=Enterob... 144 2e-33 UniRef50_A8GCM0 Regulator of competence-specific genes n=2 Tax=S... 140 4e-32 UniRef50_C2LJW4 Regulator of competence-specific genes n=3 Tax=P... 120 4e-26 UniRef50_C5BDN6 Putative uncharacterized protein n=2 Tax=Edwards... 112 7e-24 UniRef50_D1NZX4 Regulator n=5 Tax=Enterobacteriaceae RepID=D1NZX... 111 1e-23 UniRef50_Q5E4H8 DNA transformation protein TfoX2 (Sxy) n=62 Tax=... 97 4e-19 UniRef50_C9NUS6 DNA transformation protein TfoX n=1 Tax=Vibrio c... 90 4e-17 UniRef50_D0IB87 DNA transformation protein TfoX n=3 Tax=Vibriona... 80 5e-14 UniRef50_A6CYN5 Putative uncharacterized protein n=1 Tax=Vibrio ... 72 9e-12 UniRef50_Q5E6F5 DNA transformation protein TfoX1 (Sxy) n=55 Tax=... 71 2e-11 UniRef50_A7K3V4 DNA transformation protein TfoX n=6 Tax=Vibriona... 70 5e-11 UniRef50_Q65Q52 TfoX protein n=1 Tax=Mannheimia succiniciproduce... 65 2e-09 UniRef50_Q0I5V4 DNA transformation protein n=4 Tax=Pasteurellace... 63 6e-09 UniRef50_UPI0001BCFC5E putative DNA transformation protein n=2 T... 59 8e-08 UniRef50_A9KSA6 TfoX domain protein n=14 Tax=Bacteria RepID=A9KS... 58 2e-07 UniRef50_B0BSS9 Possible DNA transformation protein n=5 Tax=Past... 57 5e-07 UniRef50_C6ALQ9 DNA transformation protein TfoX (Competence acti... 56 8e-07 UniRef50_P43779 DNA transformation protein tfoX n=17 Tax=Haemoph... 54 4e-06 UniRef50_A7MK87 Putative uncharacterized protein n=2 Tax=Cronoba... 54 5e-06 UniRef50_B2TNQ5 TfoX C-domain superfamily n=14 Tax=cellular orga... 51 2e-05 UniRef50_D0XP84 TfoX domain protein n=1 Tax=Brevundimonas subvib... 51 3e-05 UniRef50_A5EK31 Putative uncharacterized protein n=1 Tax=Bradyrh... 50 4e-05 UniRef50_B3T1X2 Putative TfoX N-terminal domain protein n=1 Tax=... 47 4e-04 UniRef50_A6LXZ3 TfoX, C-terminal domain protein n=7 Tax=cellular... 46 8e-04 UniRef50_A8IAK2 TfoX protein n=1 Tax=Azorhizobium caulinodans OR... 46 8e-04 UniRef50_C9R7I0 DNA transformation protein TfoX (Competence acti... 46 9e-04 UniRef50_B4W9C4 TfoX N-terminal domain superfamily n=1 Tax=Brevu... 45 0.002 UniRef50_Q1H056 TfoX-like protein n=1 Tax=Methylobacillus flagel... 44 0.003 UniRef50_A6VL14 Regulator of competence-specific genes n=1 Tax=A... 44 0.004 UniRef50_B8DD74 TfoX domain protein n=15 Tax=Bacteria RepID=B8DD... 44 0.004 UniRef50_UPI00017468B2 TfoX N-terminal domain protein n=1 Tax=Ve... 44 0.005 UniRef50_B0CFX0 TfoX N-terminal domain protein n=1 Tax=Acaryochl... 43 0.005 UniRef50_B0MI89 Putative uncharacterized protein n=1 Tax=Anaeros... 42 0.014 UniRef50_Q1YNM3 Putative uncharacterized protein n=1 Tax=Auranti... 42 0.015 UniRef50_B9CWT0 Possible DNA transformation protein n=2 Tax=Acti... 42 0.016 UniRef50_C6X8H0 TfoX domain protein n=1 Tax=Methylovorus sp. SIP... 41 0.021 UniRef50_B1Y642 TfoX domain protein n=1 Tax=Leptothrix cholodnii... 41 0.024 UniRef50_A5W959 TfoX, C-terminal domain protein n=15 Tax=Pseudom... 41 0.024 UniRef50_Q476T5 TfoX, N-terminal n=5 Tax=cellular organisms RepI... 41 0.026 UniRef50_C5CTZ8 TfoX domain protein n=1 Tax=Variovorax paradoxus... 41 0.032 >UniRef50_P75869 Protein sxy n=100 Tax=Enterobacteriaceae RepID=SXY_ECOLI Length = 209 Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust. Identities = 209/209 (100%), Positives = 209/209 (100%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC Sbjct: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK Sbjct: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE Sbjct: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 Query: 181 AALPVARRQELAEWADSLTPKQEFPAELE 209 AALPVARRQELAEWADSLTPKQEFPAELE Sbjct: 181 AALPVARRQELAEWADSLTPKQEFPAELE 209 >UniRef50_B5XY45 DNA transformation protein Sxy n=5 Tax=Klebsiella RepID=B5XY45_KLEP3 Length = 198 Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 100/197 (50%), Positives = 136/197 (69%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M+ L R + Q ++ LG + R LFG YSL +DDTVFAMV++G++YLRACEQSA Y Sbjct: 1 MRKLVCPRFPQFQACVSPLGQLHSRPLFGGYSLAIDDTVFAMVAEGDIYLRACEQSAAYR 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 V+H LT ++ GR V + YY++D++LWR++ +L RLS S +A +EK+ R RLK Sbjct: 61 VEHRNPLLTLRRHGRIVPMKYYQIDDALWRDETQLFRLSLLSWQSAQREKNHRRASGRLK 120 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPN+SFH+E L GI DVR LR +GA+ W RLR+ N+ ++ +L LEGAI+G+H Sbjct: 121 DLPNISFHMELQLIHAGIPDVRTLREVGAQQAWQRLRENNASLSLNVLLALEGAIVGVHA 180 Query: 181 AALPVARRQELAEWADS 197 AALP RRQEL EWA + Sbjct: 181 AALPTLRRQELLEWAGA 197 >UniRef50_C9Y0Q1 Protein sxy n=2 Tax=Cronobacter RepID=C9Y0Q1_CROTZ Length = 217 Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 88/194 (45%), Positives = 122/194 (62%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M S + + Q L++LG + +RSLFG YSL ++D VFAM+ +G YLRA QS Y Sbjct: 14 MDKSSSDTLVRVQNTLSSLGNVTHRSLFGGYSLAINDAVFAMLVEGRFYLRASNQSRDYQ 73 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + H P L + GR ++LNYY VDE+LW + L ++ +L A EK+ R R+K Sbjct: 74 LAHNPPMLVCTRRGRHISLNYYLVDEALWNSPPLLREHARTALACAQAEKTERARERRVK 133 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 D+PN++ LE L E GI+DV L GAK CWL+LR+ ++ ++L+ L+GAIIG HE Sbjct: 134 DMPNLNVQLEVSLWEAGIRDVETLCAYGAKECWLKLRKARKNLSLQVLYALQGAIIGTHE 193 Query: 181 AALPVARRQELAEW 194 AALPV R+EL EW Sbjct: 194 AALPVHIREELLEW 207 >UniRef50_C8Q7W7 Regulator of competence-specific genes protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q7W7_9ENTR Length = 199 Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 90/190 (47%), Positives = 119/190 (62%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHP 64 S+ + +S+ +LA LG IE R+ FG Y+L+V+ VFA ++D LYLRACE Y + P Sbjct: 4 SHPMVEQSKTHLAALGDIESRTQFGGYTLSVEKVVFAFINDDALYLRACEAVTNYATQCP 63 Query: 65 PVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPN 124 L Y K G VTL+YY+VD LW+ +L++LS +L AA +E TR RLKDLPN Sbjct: 64 MEPLIYSKRGMPVTLSYYKVDTHLWQKPEQLMQLSASALRAAREELQTRYVSLRLKDLPN 123 Query: 125 MSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALP 184 +S +E +L +VGI+ V+ L +GAK WL+LR N + K L LEGAI G HEAALP Sbjct: 124 LSLRMEMMLHKVGIRSVKHLCEIGAKKSWLKLRAINKNIGLKTLLALEGAISGHHEAALP 183 Query: 185 VARRQELAEW 194 R EL W Sbjct: 184 REVRDELCAW 193 >UniRef50_C6CPM3 Regulator of competence-specific genes n=12 Tax=Enterobacteriaceae RepID=C6CPM3_DICZE Length = 209 Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 84/209 (40%), Positives = 127/209 (60%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK L KRI +++ + LG+I RS FG YS+ VD +FA+VS+GELYLRA + + Sbjct: 1 MKKLCEKRILQAKTVFSPLGSILSRSQFGGYSIAVDGVIFALVSNGELYLRAAPDNEAFF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + L Y K G V LNYY V E+LW+++ L+ L+ +L+ A ++K+ R RLK Sbjct: 61 LDRQTPKLIYTKRGLPVPLNYYLVGETLWQDESVLLELASCALEGARQDKAARMRCIRLK 120 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPN++ LE +L + GI+++ L LGAK +L+LR + ++ +L L GAI G+H+ Sbjct: 121 DLPNINHDLERLLWKAGIRNIDELHRLGAKTSYLKLRSVSQNLSVNVLLALAGAICGVHQ 180 Query: 181 AALPVARRQELAEWADSLTPKQEFPAELE 209 AALP R EL EW ++ + + P + Sbjct: 181 AALPQVVRSELIEWFENTSLRAIRPPRIN 209 >UniRef50_B2VDF5 Regulator of competence-specific genes n=3 Tax=Erwinia RepID=B2VDF5_ERWT9 Length = 209 Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 81/190 (42%), Positives = 115/190 (60%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHP 64 S ++I + ++ LA LG ++ R+ FG YSL+V+ TVFA+V++GE+YLRACE+ Y + Sbjct: 4 SRRKIAEVKQRLARLGEVKSRTQFGGYSLSVEKTVFAVVAEGEMYLRACERLQPYITERK 63 Query: 65 PVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPN 124 L+ K G SV L+YYRVD +LW + L+ S L A ++ R +RLKDLPN Sbjct: 64 MEALSLNKRGVSVELDYYRVDRALWSDDNLLLTFSHICLMEAQRQLQERQNNQRLKDLPN 123 Query: 125 MSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALP 184 + +E +L +VGI + L+ GAK CWLRL N V +LF L+GAI G H LP Sbjct: 124 LGIRMEMLLRQVGISSIEMLKRQGAKNCWLRLHACNKNVGLTVLFALQGAIAGRHYEVLP 183 Query: 185 VARRQELAEW 194 ++EL W Sbjct: 184 RVEKEELRSW 193 >UniRef50_C6DKX7 Regulator of competence-specific genes n=2 Tax=Pectobacterium RepID=C6DKX7_PECCP Length = 206 Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/194 (41%), Positives = 118/194 (60%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK L KRI +SQ ++LG I RS FG YS+ + T+F +VS+GELYLRA ++ +Y Sbjct: 1 MKQLCKKRILQSQHSFSSLGDITSRSQFGGYSIAANKTIFGLVSEGELYLRASKKDERYF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + L Y K G + LNY+ VDE+LW+ L+ ++ +L A ++ + T RLK Sbjct: 61 QQRDMPHLIYTKRGMPLPLNYFLVDEALWQEPQTLLYFARLALAGAQHDQVLKCTSGRLK 120 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPN++ +E +L + GI++V L+ GAK +L LR+ + ++ +L L GAI G H+ Sbjct: 121 DLPNLNHDIERLLWKAGIRNVDELQHYGAKNSYLELRKVRANLSVNVLLALAGAICGTHQ 180 Query: 181 AALPVARRQELAEW 194 AALP R EL EW Sbjct: 181 AALPRGIRNELLEW 194 >UniRef50_A7FJS6 DNA transformation protein tfoX n=30 Tax=Enterobacteriaceae RepID=A7FJS6_YERP3 Length = 211 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 87/195 (44%), Positives = 111/195 (56%), Gaps = 1/195 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK +S KRI ++Q LG I RS FG Y L V+ +FA+VS+GELYLRA + Sbjct: 1 MKIMSEKRIAQAQVRFGFLGQITIRSQFGGYGLLVNSIMFAVVSEGELYLRANDNIEDLF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAA-LKEKSTRNTRERL 119 L Y K G V L YYRVD SLW + L+L + + + A + S + RL Sbjct: 61 RASGMANLVYAKRGLPVLLRYYRVDTSLWNDGLRLHHFVRQAYEGAKIDVLSKKGPVVRL 120 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 KDLPN+S LE +L +VGIK+ LR+ GAK C+L+LR + IL L GAI G H Sbjct: 121 KDLPNLSASLERLLWKVGIKNATELRLEGAKCCYLKLRALRRSLGINILLALAGAISGYH 180 Query: 180 EAALPVARRQELAEW 194 AALP+ R EL EW Sbjct: 181 YAALPLMMRSELIEW 195 >UniRef50_A8GCM0 Regulator of competence-specific genes n=2 Tax=Serratia RepID=A8GCM0_SERP5 Length = 219 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 79/195 (40%), Positives = 112/195 (57%), Gaps = 1/195 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK S RI +++ Y LG I RS FG Y L D +FA++++GELYLRA + Sbjct: 1 MKGTSSGRIVQAKAYFYALGGITTRSQFGGYGLLADGVMFAVIAEGELYLRATDSLEPTF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKE-KSTRNTRERL 119 V + Y K G +T+ YY VDE+LWR++ +LV L+ ++ A +E K + + RL Sbjct: 61 RSRGMVNMVYSKRGVPITMRYYWVDETLWRDRRELVGLAWQAIREARRELKVKTDNQGRL 120 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 K LPN+ ++E +L GI +V LR+ GAK +LR+ QQ + ++L L GAI G H Sbjct: 121 KTLPNIDINMERLLWRAGIHNVYDLRLNGAKRSYLRMLQQQRNLGLRVLLSLGGAIAGYH 180 Query: 180 EAALPVARRQELAEW 194 AALP R EL W Sbjct: 181 HAALPSEMRSELTNW 195 >UniRef50_C2LJW4 Regulator of competence-specific genes n=3 Tax=Proteus RepID=C2LJW4_PROMI Length = 204 Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 65/187 (34%), Positives = 98/187 (52%), Gaps = 1/187 (0%) Query: 16 LATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGR 75 +A G + +S FG YSL VD+ +FA+ +D E YL+ + + Y K G Sbjct: 16 VAEYGKLSKKSQFGGYSLMVDEVIFAITADNEFYLKGSGFAETLYKANNMDAYVYLKKGI 75 Query: 76 SVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKE-KSTRNTRERLKDLPNMSFHLEAILG 134 +TL YYR+ +++WRN KL + ++ + +E + R+KDLPN+ LE L Sbjct: 76 PITLRYYRITQAIWRNSAKLNQYIDFAYHYSTQEFLGQQKQPRRIKDLPNLGIALEKKLN 135 Query: 135 EVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAEW 194 +VGI + LR +GAK C+L+L Q +L L GAI+G H + LP + EL W Sbjct: 136 QVGINRIEELRTIGAKACYLKLIAQPKQGNSDLLLALAGAIVGCHRSVLPSQLKMELLNW 195 Query: 195 ADSLTPK 201 L+ K Sbjct: 196 YKELSVK 202 >UniRef50_C5BDN6 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=C5BDN6_EDWI9 Length = 207 Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 1/195 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK L ++ ++ A LG + RS FG + D +FA++++GELYLRA + ++C Sbjct: 1 MKGLQGEKHRVAESLFAALGRVLLRSQFGGQGVWCDGVMFALIAEGELYLRARDAQGRHC 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTR-NTRERL 119 Y K G V L YYRV+E++W+ +L L + SL A + R RL Sbjct: 61 EDCGMQPFIYTKRGFPVRLGYYRVEEAIWQQPQRLAILLQRSLQQARSDNDIRLAAMRRL 120 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 PN+S ++E L +GI+ + L+ +GA + +L++ N V +++LF LE A+ G H Sbjct: 121 HTRPNISINMERRLYRIGIRSLADLKRVGATQAFSQLKEANHQVGDRVLFDLEAAVQGCH 180 Query: 180 EAALPVARRQELAEW 194 A LP + L +W Sbjct: 181 SAVLPRPVSEALRQW 195 >UniRef50_D1NZX4 Regulator n=5 Tax=Enterobacteriaceae RepID=D1NZX4_9ENTR Length = 200 Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 63/189 (33%), Positives = 104/189 (55%), Gaps = 2/189 (1%) Query: 13 QEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKK 72 QE L G ++ R+ FG Y L +++ + +V DG+ Y+R C + Y L Y K Sbjct: 12 QETLKQFGELKKRNHFGGYCLCINNILVGLVLDGQFYVRGCLFARSYFESVGLNRLIYSK 71 Query: 73 CGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE-RLKDLPNMSFHLEA 131 G + L YY++ E+ W N L + + + +A +E + + R+KDLPNM+ +E Sbjct: 72 KGVPLELRYYQLPENAWSNVEILSHIIELAYRSAHEEAQKKASATVRIKDLPNMNMSMER 131 Query: 132 ILGEVGIKDVRALRILGAKMCWLRLRQQN-SLVTEKILFMLEGAIIGIHEAALPVARRQE 190 LG++GI L ++GAK C+L+L+Q ++ K+L L AI G H LPV +QE Sbjct: 132 ALGKIGIFRAEELVMIGAKACFLKLKQHGKQTLSVKLLIGLAAAIEGCHSEVLPVRAKQE 191 Query: 191 LAEWADSLT 199 L +W ++++ Sbjct: 192 LIKWFNNVS 200 >UniRef50_Q5E4H8 DNA transformation protein TfoX2 (Sxy) n=62 Tax=Vibrionales RepID=Q5E4H8_VIBF1 Length = 195 Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 3/179 (1%) Query: 16 LATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGR 75 L++LG I RS+FG + + +DDT+FA+V +L+LRA +++ + YKK G Sbjct: 13 LSSLGKITSRSMFGGFGIFIDDTMFALVVQDKLHLRASDETINLFKEQGFEPYVYKKRGF 72 Query: 76 SVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTR--ERLKDLPNMSFHLEAIL 133 V Y+ + W ++ + +LD A K+K + + R+KDLPN+ E +L Sbjct: 73 PVVTKYFAISPECWDEPDSILIQAVVALDVAKKDKEKQKSAGPSRIKDLPNLRLATERML 132 Query: 134 GEVGIKDVRALRILGAKMCWLRLRQ-QNSLVTEKILFMLEGAIIGIHEAALPVARRQEL 191 + GI V L+ G+ + ++Q +S V++++L+ LEGAI G+H + + R EL Sbjct: 133 KKAGITTVEELKNTGSVNAYKAIQQTHSSSVSDELLWSLEGAIKGMHWSVISAETRNEL 191 >UniRef50_C9NUS6 DNA transformation protein TfoX n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NUS6_9VIBR Length = 194 Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 4/179 (2%) Query: 16 LATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGR 75 L +G I +FG + L D +FA++ +Y R + S + TYKK G Sbjct: 10 LRPIGEITTTPMFGGFGLFKDKVMFALIHKEHIYFRFDDASQHTFEPEALIRFTYKKSG- 68 Query: 76 SVTLNYYRVDESLWRNQLKLVRLSKYSL-DAALKEKSTRNT--RERLKDLPNMSFHLEAI 132 S+T Y ES N ++ ++ +L A +++S+R + +R+KDLPNM++++E + Sbjct: 69 SITNTQYFTHESFKSNTALVLEHAQNALIRAEQRQQSSRVSFNEQRIKDLPNMTYNMEIM 128 Query: 133 LGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQEL 191 L + G+ V AL+ LGA ++RL+++ V +K + ++GAI G H A L + R +L Sbjct: 129 LKKSGVDSVTALKRLGALQSFVRLKKRFPEVGDKAVLSIQGAISGQHSAVLAKSERSKL 187 >UniRef50_D0IB87 DNA transformation protein TfoX n=3 Tax=Vibrionaceae RepID=D0IB87_VIBHO Length = 194 Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 3/181 (1%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 EYL+ G E RS+FG V +FA+V + +YLR ++ Q + + K Sbjct: 10 EYLSQFGETEKRSMFGGTGFFVSGAMFALVKEDRIYLRGNDELTQQLIDKECKKFVHVKK 69 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTR--ERLKDLPNMSFHLEA 131 + +NYY + + L + K S++ ++ EK R+++ +RL+DLPN+ +E Sbjct: 70 SSTAIVNYYDITDLYEAKDQGLDAMVKKSVENSVAEKEYRDSKSNKRLRDLPNLRLTIER 129 Query: 132 ILGEVGIKDVRALRILGAKMCWLRLRQQNSL-VTEKILFMLEGAIIGIHEAALPVARRQE 190 +L + G++DV + + + ++++ + V K+L+M GA G+H L +Q+ Sbjct: 130 MLKKAGVEDVDTFFSMSPEELFRKVQEAHGYDVDVKLLWMFAGAQKGMHWTLLSEETKQQ 189 Query: 191 L 191 L Sbjct: 190 L 190 >UniRef50_A6CYN5 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYN5_9VIBR Length = 204 Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 16/190 (8%) Query: 19 LGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRAC------EQSAQYCVKHPPVWLTYKK 72 L I RS+FG + + +FA++ +LYLRA E S C + W + + Sbjct: 15 LKEISIRSVFGGKGVLSNGVMFALIKGNKLYLRAPNSKFKDEFSQLGCTPYEFHWRSSSR 74 Query: 73 CGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAI 132 S++ +YY + E++ ++ +L + L+EK + T R+KDLPNM + E + Sbjct: 75 NYPSLS-SYYSIPEAVKHCDKQIAKLCEEVWSVGLEEKRRKETPTRIKDLPNMQYKTERM 133 Query: 133 LGEVGIKDVRALRILGA-----KMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVAR 187 L + GI + LR G +C +Q +LF + GA+ GIH + LP Sbjct: 134 LRKAGIHSIDELREQGPVNAYKAVCGSHDKQPGI----NLLFYIAGALEGIHWSILPETL 189 Query: 188 RQELAEWADS 197 R+ L+ A S Sbjct: 190 RETLSRQAGS 199 >UniRef50_Q5E6F5 DNA transformation protein TfoX1 (Sxy) n=55 Tax=Vibrionales RepID=Q5E6F5_VIBF1 Length = 209 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/185 (28%), Positives = 92/185 (49%), Gaps = 13/185 (7%) Query: 15 YLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLR-ACEQSAQY----CVKHPPVWLT 69 ++ LG RS+FG L +D +F++V+DG LY+R E A++ C + V Sbjct: 26 FVKKLGRFNKRSMFGGVGLFNEDAMFSLVTDGRLYVRGGGEVDARFEELGCERFKHV--- 82 Query: 70 YKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE--RLKDLPNMSF 127 K T+NY+ V E + L+ + + +++ + E+ + ++E RL+DLPNM Sbjct: 83 --KKTTIATVNYFDVTELFEKKPASLLSIVQEAMENSRLEREFKKSKENRRLRDLPNMQL 140 Query: 128 HLEAILGEVGIKDVRALRILGAKMCWLRLRQQ-NSLVTEKILFMLEGAIIGIHEAALPVA 186 LE ++ + G+ DV + +GA + ++ V K+L+ GA G+H L Sbjct: 141 TLERMVKKAGVPDVDSFLEIGAVDVFKKVNHTYGGDVDVKLLWKFAGAESGVHWTLLQEP 200 Query: 187 RRQEL 191 +Q L Sbjct: 201 AKQAL 205 >UniRef50_A7K3V4 DNA transformation protein TfoX n=6 Tax=Vibrionaceae RepID=A7K3V4_VIBSE Length = 195 Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 49/181 (27%), Positives = 87/181 (48%), Gaps = 3/181 (1%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 +Y+ + RS+FG L DD +FA+VS+ YLR + + + K Sbjct: 10 KYVRNFSEYQKRSMFGGIGLFTDDAMFALVSNDCCYLRGGNGLDEVFTQLNCEKYKHVKK 69 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNT--RERLKDLPNMSFHLEA 131 + T+NYY V + L L + S++ ++KE+ + + RL+DLPNM LE Sbjct: 70 QTTATVNYYDVTDLFESGYAGLDELVQKSIEYSIKERKYQKSSASRRLRDLPNMQLTLER 129 Query: 132 ILGEVGIKDVRALRILGAKMCWLRLR-QQNSLVTEKILFMLEGAIIGIHEAALPVARRQE 190 ++ + G+ DV LG + +++ + V K+L+ GA G+H + R+++ Sbjct: 130 MVKKAGVDDVETFLELGPVKVFNKVKVAYGNDVDVKLLWKFAGATDGVHWKLIQEPRKKQ 189 Query: 191 L 191 L Sbjct: 190 L 190 >UniRef50_Q65Q52 TfoX protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65Q52_MANSM Length = 217 Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 3/168 (1%) Query: 25 RSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV-WLTYKKCGRSVTLNYYR 83 + LF Y L +F +V D +L+A Q +Y K V W + K +YYR Sbjct: 26 KHLFVGYGLFYRKVMFGIVIDDNFFLKAENQLVEYVEKLGAVSWDIFNKNTNLAISSYYR 85 Query: 84 VDESLWRNQLKLVRLSKYSLDAALKEKSTRNT--RERLKDLPNMSFHLEAILGEVGIKDV 141 + +L N+ + L S+ ++ N +ER+K+LPN+S E +L ++GI +V Sbjct: 86 LPRALVDNEEEFKTLVILSIKQQQRKILDLNIAKKERIKELPNLSIKHERLLAKIGINNV 145 Query: 142 RALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQ 189 + + G C+++L+ V ++ ++ + A+ H + L + ++ Sbjct: 146 KEFKSAGISNCFVKLKVHGFSVNVELFWLFQAALKNKHVSLLTKSEKK 193 >UniRef50_Q0I5V4 DNA transformation protein n=4 Tax=Pasteurellaceae RepID=Q0I5V4_HAES1 Length = 238 Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/142 (26%), Positives = 75/142 (52%), Gaps = 3/142 (2%) Query: 19 LGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV-WLTYKKCGRSV 77 +GTI ++LF Y L +F + G+ Y+RA ++ A+Y + +L + Sbjct: 41 IGTITVKNLFSGYGLFKKGLMFGLYQQGKFYIRAEKELAKYLESLGALSYLALTPNPQLN 100 Query: 78 TLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNT--RERLKDLPNMSFHLEAILGE 135 NYY + + + +N+ ++ S+ +K + ++R+KDLPN+S E +L + Sbjct: 101 IGNYYLLPKEITQNKEHFRQILYLSIAQTRAKKIAQELARKKRIKDLPNLSIKHERLLSK 160 Query: 136 VGIKDVRALRILGAKMCWLRLR 157 + IKD+++ ++ GA C++ L+ Sbjct: 161 IHIKDIKSFKLKGAANCYIELK 182 >UniRef50_UPI0001BCFC5E putative DNA transformation protein n=2 Tax=Mannheimia haemolytica serotype A2 RepID=UPI0001BCFC5E Length = 221 Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 42/184 (22%), Positives = 90/184 (48%), Gaps = 10/184 (5%) Query: 19 LGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVT 78 +GTI ++ F Y++ D + A+ +G YLR ++ +Y ++P + C + Sbjct: 27 IGTIRLKTYFSYYAVFKDGLMIALYQNGATYLRIAKKDIEYIRQYPETCIL---CDEKIG 83 Query: 79 LN---YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER---LKDLPNMSFHLEAI 132 + ++ + + L + K L + + L+ + + +++R +++LPNM+ LE + Sbjct: 84 IQSRKFHYIPQVLIDDTPKFSSLL-FGIIEELRTEKYKISQKRATQIRNLPNMNLKLERM 142 Query: 133 LGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELA 192 L ++GI + G +++L Q VTE +LF L GA+ + +++EL Sbjct: 143 LKKIGIHSIHDFTQEGYMSTFIKLILQGFDVTEDLLFKLNGALNHQYIYTFTDQQKRELM 202 Query: 193 EWAD 196 + A+ Sbjct: 203 QEAN 206 >UniRef50_A9KSA6 TfoX domain protein n=14 Tax=Bacteria RepID=A9KSA6_CLOPH Length = 108 Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/77 (38%), Positives = 47/77 (61%) Query: 115 TRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGA 174 T +L +LPN+ +E L EVGI++ L+ LGA+ WL++++ + L+ LEGA Sbjct: 23 TMAQLSNLPNIGKEVERQLNEVGIENYEQLKSLGAEAAWLKIQEIDESACIHRLYALEGA 82 Query: 175 IIGIHEAALPVARRQEL 191 I+GI + LP R+ EL Sbjct: 83 ILGIKKNLLPNERKSEL 99 >UniRef50_B0BSS9 Possible DNA transformation protein n=5 Tax=Pasteurellaceae RepID=B0BSS9_ACTPJ Length = 218 Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 13/182 (7%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVS--DGELYLRACEQSAQYC 60 ++S K+ +E + LG I ++S F + DDT+FA+ + LYLR Q Sbjct: 2 AISPKKFQYLKEIFSPLGEINFKSYFSYLGIFKDDTMFALYDHKNDRLYLRKSAQFYPDI 61 Query: 61 VKHPPV-WLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKST------R 113 ++ P+ +L ++ G+ + +Y + S+ N + L + + +A++E T Sbjct: 62 IRTIPIHFLIDRRIGKQQSHIFYLIPSSIIHN----LHLYTHWILSAIEEYQTAKAKLIS 117 Query: 114 NTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEG 173 + +++ LPN++ ++E +L + I V L+ +G +++L VTE LF L Sbjct: 118 QNKNKIRLLPNLNINIERLLARIEIYTVDDLKNVGVINAFVKLIMLGLEVTELHLFKLYA 177 Query: 174 AI 175 A+ Sbjct: 178 AL 179 >UniRef50_C6ALQ9 DNA transformation protein TfoX (Competence activator) (Protein sxy) n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6ALQ9_AGGAN Length = 210 Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 4/149 (2%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVW--LTYK 71 E+ + ++ ++LF + + D +FA+ +G +Y++A Y K V + + Sbjct: 11 EFSELIEDVKVKNLFNGHGIFHQDIMFALHQNGSIYIKAEGDLVSYLEKLGAVAYAINHD 70 Query: 72 KCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTR--NTRERLKDLPNMSFHL 129 + NYY++ S+ RN+ K + ++ A +K + + +ER+K+L N S Sbjct: 71 SMKKLALYNYYQLPNSIRRNKEKFKEILILAIKQAKAKKLSDELSKKERIKELANFSIKH 130 Query: 130 EAILGEVGIKDVRALRILGAKMCWLRLRQ 158 E +L +V I V R LGA ++RL++ Sbjct: 131 ERLLAKVNIYTVTEYRKLGAYHSFIRLKK 159 >UniRef50_P43779 DNA transformation protein tfoX n=17 Tax=Haemophilus influenzae RepID=TFOX_HAEIN Length = 217 Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 4/177 (2%) Query: 19 LGTIEYRSLFGSYSL-TVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSV 77 +G + +++LF Y L ++T+FA+ + +LYLR A K T + + Sbjct: 19 VGNVSFKNLFTGYGLFHKEETMFAIWQNKKLYLRGEGVLAIQLTKLGCEPFTTNELNKRF 78 Query: 78 TLN-YYRVDESLWRNQLKLVRLSKYSLDAALKEK--STRNTRERLKDLPNMSFHLEAILG 134 L+ YY + + + R+ +L S+ L++K T RLKDLPN++ E L Sbjct: 79 VLSQYYALSDQILRSNRLCRKLIILSIKQILEQKLECTLRKLNRLKDLPNLTIKHERALI 138 Query: 135 EVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQEL 191 +VGI +V LR +GA+ + L++ S T + L A+ + L A ++ L Sbjct: 139 KVGITNVAMLREIGAENALVELKKSGSGATLDFYWKLVCALQNKNSQMLSQAEKERL 195 >UniRef50_A7MK87 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MK87_ENTS8 Length = 130 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 6/99 (6%) Query: 16 LATLGTIEYRSLFGSYSLTVDDTVFAMV-SDGELYLRACEQSAQYCVKH--PP-VWLTYK 71 LA LG +E R +FG +L +FA++ D +LY++A +Q+ + + PP ++T + Sbjct: 15 LAPLGVVETRRMFGCVALFQAGRMFALLDGDAQLYIKADDQNRERFIAEGFPPFTYVTTR 74 Query: 72 KCG--RSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALK 108 + G + VTL YYR+ E L + +L+R + L AA++ Sbjct: 75 RSGGQQEVTLGYYRIAEELVEDNQELLRWAHEGLAAAMR 113 >UniRef50_B2TNQ5 TfoX C-domain superfamily n=14 Tax=cellular organisms RepID=B2TNQ5_CLOBB Length = 86 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 44/76 (57%) Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGI 178 L LPN+ +E+ L +VGI L+ +GA+ WL++++ + L LEGAI GI Sbjct: 4 LSKLPNIGKEVESQLNKVGIFTYDELKNIGAEQAWLKIQKNDVSACIHRLLALEGAIQGI 63 Query: 179 HEAALPVARRQELAEW 194 + ALP R++ L ++ Sbjct: 64 KKTALPQERKESLKDF 79 >UniRef50_D0XP84 TfoX domain protein n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XP84_9CAUL Length = 120 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/106 (24%), Positives = 60/106 (56%), Gaps = 1/106 (0%) Query: 13 QEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYK- 71 +E A LG +E + +FG ++ + +FA++ DG ++L+A E +A V+ T+ Sbjct: 12 REQFAGLGPVEIKRMFGGAAVYANGLIFALLDDGVVWLKADETNAPLLVEAGARQFTFPT 71 Query: 72 KCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE 117 K G+++++ Y+ + E + + V ++ S++ AL++ + + R+ Sbjct: 72 KDGQTMSMAYWSMPEPAMDDPDESVAWARQSIEVALRKAAAKRPRK 117 >UniRef50_A5EK31 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EK31_BRASB Length = 126 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 5/90 (5%) Query: 13 QEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK---HPPVWLT 69 +E A LG+I R +FG + D + MV+D LYLR + + + HPP L Sbjct: 12 REQFAPLGSITLRRMFGKTGIFHDGAMLGMVADNTLYLRVDDDNRAMFAEAQSHPP--LN 69 Query: 70 YKKCGRSVTLNYYRVDESLWRNQLKLVRLS 99 Y+K G ++ L ++R+ + L+ + + S Sbjct: 70 YRKKGVAIDLAFWRIPDRLFDEPDEFISWS 99 >UniRef50_B3T1X2 Putative TfoX N-terminal domain protein n=1 Tax=uncultured marine microorganism HF4000_097M14 RepID=B3T1X2_9ZZZZ Length = 136 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/82 (28%), Positives = 45/82 (54%) Query: 16 LATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGR 75 L +G + Y+ LFG Y++ D FA+V DG +Y + + + + LTY+K G+ Sbjct: 35 LEPMGELSYKPLFGGYAICKHDAAFALVFDGAVYFKTDTTNRKDYESYNSNPLTYQKQGK 94 Query: 76 SVTLNYYRVDESLWRNQLKLVR 97 +++L+ V + +Q +L++ Sbjct: 95 TISLSNLEVPAEVIEDQDRLLQ 116 >UniRef50_A6LXZ3 TfoX, C-terminal domain protein n=7 Tax=cellular organisms RepID=A6LXZ3_CLOB8 Length = 86 Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 42/76 (55%) Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGI 178 L LPN+ +E L +VGI L+ +GA+ WL++++ + L LEGAI GI Sbjct: 4 LSKLPNIGKEVERQLNQVGIFTYDELKAIGAEQAWLKIQEIDPSACIHRLLALEGAIHGI 63 Query: 179 HEAALPVARRQELAEW 194 + L R+++L ++ Sbjct: 64 KKTELSTKRKEDLKDF 79 >UniRef50_A8IAK2 TfoX protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAK2_AZOC5 Length = 143 Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/74 (32%), Positives = 39/74 (52%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 + LA LG +E + +FG + + D +FA+ S G+L+++A AQ L Y Sbjct: 8 DLLAPLGPVEIKRMFGGHGIFYDGRMFALESGGDLFIKADGDFAQELAALGCAPLGYTAR 67 Query: 74 GRSVTLNYYRVDES 87 R VTL Y+ + E+ Sbjct: 68 NRQVTLPYWTLPEA 81 >UniRef50_C9R7I0 DNA transformation protein TfoX (Competence activator) (Protein sxy) n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=C9R7I0_AGGAD Length = 211 Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 4/168 (2%) Query: 20 GTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTY--KKCGRSV 77 G I ++LF + + +FA+ + ++LRA ++ Y V + + Sbjct: 18 GEISIKNLFTGHGIFHSGIMFALHQNDSIFLRAEDELVPYLESLGAVAYSIDPNNTNKLA 77 Query: 78 TLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRN--TRERLKDLPNMSFHLEAILGE 135 YY++ S+ +N+ + K S+ A +K + +ER+K+L N S E +L + Sbjct: 78 LHRYYQLPHSIRKNKPLFEKTVKLSIQQAKFKKVAEDLTKKERIKELANFSIKHERLLAK 137 Query: 136 VGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAAL 183 + I V + +GA ++RL++ ++L+ L A+ H + L Sbjct: 138 INIYTVSEFQKIGAIHSYVRLKKLGVSANVELLWTLCAALKNKHASLL 185 >UniRef50_B4W9C4 TfoX N-terminal domain superfamily n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W9C4_9CAUL Length = 118 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/105 (22%), Positives = 56/105 (53%), Gaps = 1/105 (0%) Query: 13 QEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYK- 71 +E+ A LG +E + +FG + +FA++ DG ++L+ E + V+ Y Sbjct: 12 REHFAGLGLLEIKRMFGGAGVYASGVMFALLDDGVVWLKGDEALGEAFVEAGCRQFRYPT 71 Query: 72 KCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTR 116 K GR++++ Y+ + E+ + + V ++ +L+ A+++ S + + Sbjct: 72 KDGRTMSMGYWTLPETALDDPDEAVDWARRALEVAVRKASGKKPK 116 >UniRef50_Q1H056 TfoX-like protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H056_METFK Length = 108 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/72 (30%), Positives = 38/72 (52%) Query: 13 QEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKK 72 +E L G I + +FG Y + D +FA+++D LYL+A +S + Y K Sbjct: 9 EELLQGFGPIRAKRMFGGYGIYHDGLMFALIADDTLYLKADAESRKEFDSLGLPAFRYAK 68 Query: 73 CGRSVTLNYYRV 84 G+ VT++Y++ Sbjct: 69 QGKEVTMSYFQA 80 >UniRef50_A6VL14 Regulator of competence-specific genes n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VL14_ACTSZ Length = 219 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 3/147 (2%) Query: 25 RSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV-WLTYKKCGRSVTLNYYR 83 + LF + + D T+FA+ ELYL+A A + + W + YY Sbjct: 31 KPLFIGHGIFYDGTMFAIYQKQELYLKADGDLANELLAYGSYPWAYIPRSNMKTGPKYYH 90 Query: 84 VDESLWRNQLKLVRLSKYSLDAALKEK-STRNTRE-RLKDLPNMSFHLEAILGEVGIKDV 141 + +S+ +++ RL K S+ A +K + +E +K L N++ E +L ++GI V Sbjct: 91 ISDSIQNDEILYKRLVKLSIKQAKDQKRDIKLIKESSIKYLSNLTVKHERMLAKIGIFTV 150 Query: 142 RALRILGAKMCWLRLRQQNSLVTEKIL 168 R GA ++ L + L++ +L Sbjct: 151 SEFREKGAIGAYVELIKSGMLLSINVL 177 >UniRef50_B8DD74 TfoX domain protein n=15 Tax=Bacteria RepID=B8DD74_LISMH Length = 89 Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 45/81 (55%) Query: 118 RLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIG 177 L +LPN+ LE L + GIK L+ +G+K +LR+ + +S V L LEGA+ G Sbjct: 9 NLSELPNIGKVLEQDLIKAGIKTPGELKDVGSKEAFLRIWENDSSVCLSELCALEGAVQG 68 Query: 178 IHEAALPVARRQELAEWADSL 198 I L A++ EL ++ SL Sbjct: 69 IRWHDLDEAKKSELKKFHQSL 89 >UniRef50_UPI00017468B2 TfoX N-terminal domain protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017468B2 Length = 136 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 2/107 (1%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH--PPVWLTYK 71 + L LG + R +FG Y + + +F +VS YLR +++ + P Sbjct: 10 DLLTPLGDVTARKMFGGYGIYKEALMFGLVSQNRFYLRTDDETKDRFIDQGCEPFVFCLD 69 Query: 72 KCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 K G V YY E + N ++ + + AL+ +T+ R++ Sbjct: 70 KAGNPVVSKYYEPPEMAFANAQRMRPWATMGWECALRSVTTKAARKK 116 >UniRef50_B0CFX0 TfoX N-terminal domain protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CFX0_ACAM1 Length = 120 Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/98 (23%), Positives = 52/98 (53%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 E L L + R +FG + L V+ +FA+++D +YL+A ++ + V+ Y + Sbjct: 13 ERLNHLAPVSARPMFGGHGLYVEGVMFALIADERIYLKADGENQPFFVEAGSRPFIYDRK 72 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKS 111 + + ++YY + ++ N +L +++AAL+ ++ Sbjct: 73 EKPMVMSYYLLPIDIYENLDELKVWLDSAVEAALRNQA 110 >UniRef50_B0MI89 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MI89_9FIRM Length = 95 Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 41/81 (50%) Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGI 178 LKDL N+ E L + GI L G+K WL++R + +L+ LEGA+ GI Sbjct: 14 LKDLENIGAKTEDQLNQAGIYTKEQLIKAGSKEAWLKIRAFDESACLHLLWGLEGAVEGI 73 Query: 179 HEAALPVARRQELAEWADSLT 199 + L R++L ++ D + Sbjct: 74 KKKDLSPEVRKDLKDFFDDIN 94 >UniRef50_Q1YNM3 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YNM3_MOBAS Length = 129 Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Query: 13 QEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRA-CEQSAQYCVKHPPVWLTYK 71 +E A++ R +FG + D + A+V DGELYL++ E A Y + W Y Sbjct: 7 RELFASVPGFRIRRMFGEQGIYAGDRILALVVDGELYLKSDTETDAIYEAEGLRNW-HYA 65 Query: 72 KCGRS-VTLNYYRVDES 87 + GRS V + YYR+ ++ Sbjct: 66 RTGRSPVRMPYYRMPDA 82 >UniRef50_B9CWT0 Possible DNA transformation protein n=2 Tax=Actinobacillus minor RepID=B9CWT0_9PAST Length = 214 Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust. Identities = 32/159 (20%), Positives = 72/159 (45%), Gaps = 2/159 (1%) Query: 19 LGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVT 78 +G I ++ F Y + D +FA+ D +YLR ++++ V++ T Sbjct: 19 IGDIRIKTYFSYYGIFSDGFMFALYKDDHIYLRTNQETSAAIQSIEGVFVLDDLKAGIHT 78 Query: 79 LNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNT--RERLKDLPNMSFHLEAILGEV 136 N+Y + S + + LD +E++ + + +++ L N++ +E IL + Sbjct: 79 KNFYALPISYILSSTQFPAWVTSILDELRQERTRKEEKLKTQIRSLTNLNMKIERILKRI 138 Query: 137 GIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAI 175 I +V + G ++ + +Q ++ +L+ L GA+ Sbjct: 139 NIHNVDEFKQKGYLATFVDIIKQGDEGSDLLLYKLHGAL 177 >UniRef50_C6X8H0 TfoX domain protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8H0_METSD Length = 123 Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRA-CEQSAQYCVKHPPVWLTYKK 72 + A LG I R +FG ++L F +V D LYL+A E + + P + Y+K Sbjct: 10 DIFALLGPISIRRMFGGHALYHQGLTFGLVFDETLYLKADAENAGDFQALALPRF-GYEK 68 Query: 73 CGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE 117 GR + L YY+ + + ++ + + AAL+ K + R Sbjct: 69 QGRWIDLPYYQAPDFILEDRDLAASWASKAYAAALRTKPLKPRRN 113 >UniRef50_B1Y642 TfoX domain protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y642_LEPCP Length = 134 Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 24/43 (55%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQS 56 E LA LG R +FG VDD A+++DG LYL+ QS Sbjct: 11 ELLAPLGRARSRRMFGGQGFYVDDLFIALIADGRLYLKVDAQS 53 >UniRef50_A5W959 TfoX, C-terminal domain protein n=15 Tax=Pseudomonas RepID=A5W959_PSEP1 Length = 92 Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust. Identities = 24/89 (26%), Positives = 45/89 (50%) Query: 117 ERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAII 176 + L+ L N+ L GI LR LGA + ++ + ++ +L+ +EGA++ Sbjct: 3 DELQHLKNLGKTSAQWLHAAGIHSASDLRRLGAVGAYQAVKTRGFRASKVLLYAIEGALL 62 Query: 177 GIHEAALPVARRQELAEWADSLTPKQEFP 205 +H LP+ R++ L + D+ P Q+ P Sbjct: 63 DMHWNDLPLERKEALNQQLDAKNPTQKKP 91 >UniRef50_Q476T5 TfoX, N-terminal n=5 Tax=cellular organisms RepID=Q476T5_RALEJ Length = 120 Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 27/40 (67%) Query: 17 ATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQS 56 A +G I R +FG + L D +FA+VSDG+ YL+A +++ Sbjct: 22 ARIGAISARRMFGGHGLFYDGLMFALVSDGQCYLKADDKT 61 >UniRef50_C5CTZ8 TfoX domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CTZ8_VARPS Length = 128 Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 4/98 (4%) Query: 13 QEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK--HPPVWLTY 70 E LG IE R +FG + + + + A+V+ LYL++ SA++ K PP TY Sbjct: 9 HEVFERLGRIETRRMFGGHGVWHEGRMIALVAKDTLYLKSDAGSAEHFDKLDLPP--FTY 66 Query: 71 KKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALK 108 + G+++ ++Y L+ ++ + + + +AAL+ Sbjct: 67 VREGKAMPMSYRLAPADLFEDREEAALWGRRAYEAALR 104 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P75869 Protein sxy n=100 Tax=Enterobacteriaceae RepID=S... 264 1e-69 UniRef50_C6CPM3 Regulator of competence-specific genes n=12 Tax=... 263 2e-69 UniRef50_C6DKX7 Regulator of competence-specific genes n=2 Tax=P... 241 9e-63 UniRef50_A8GCM0 Regulator of competence-specific genes n=2 Tax=S... 239 5e-62 UniRef50_C9Y0Q1 Protein sxy n=2 Tax=Cronobacter RepID=C9Y0Q1_CROTZ 234 2e-60 UniRef50_B5XY45 DNA transformation protein Sxy n=5 Tax=Klebsiell... 233 3e-60 UniRef50_C8Q7W7 Regulator of competence-specific genes protein n... 232 7e-60 UniRef50_A7FJS6 DNA transformation protein tfoX n=30 Tax=Enterob... 226 4e-58 UniRef50_B2VDF5 Regulator of competence-specific genes n=3 Tax=E... 218 8e-56 UniRef50_C5BDN6 Putative uncharacterized protein n=2 Tax=Edwards... 218 1e-55 UniRef50_D1NZX4 Regulator n=5 Tax=Enterobacteriaceae RepID=D1NZX... 211 1e-53 UniRef50_Q5E4H8 DNA transformation protein TfoX2 (Sxy) n=62 Tax=... 204 2e-51 UniRef50_C2LJW4 Regulator of competence-specific genes n=3 Tax=P... 202 5e-51 UniRef50_Q5E6F5 DNA transformation protein TfoX1 (Sxy) n=55 Tax=... 193 3e-48 UniRef50_A7K3V4 DNA transformation protein TfoX n=6 Tax=Vibriona... 193 4e-48 UniRef50_D0IB87 DNA transformation protein TfoX n=3 Tax=Vibriona... 190 2e-47 UniRef50_C9NUS6 DNA transformation protein TfoX n=1 Tax=Vibrio c... 182 8e-45 UniRef50_A6CYN5 Putative uncharacterized protein n=1 Tax=Vibrio ... 179 5e-44 UniRef50_C9R7I0 DNA transformation protein TfoX (Competence acti... 177 2e-43 UniRef50_Q65Q52 TfoX protein n=1 Tax=Mannheimia succiniciproduce... 172 7e-42 UniRef50_B0BSS9 Possible DNA transformation protein n=5 Tax=Past... 165 1e-39 UniRef50_P43779 DNA transformation protein tfoX n=17 Tax=Haemoph... 162 9e-39 UniRef50_Q0I5V4 DNA transformation protein n=4 Tax=Pasteurellace... 161 2e-38 UniRef50_UPI0001BCFC5E putative DNA transformation protein n=2 T... 160 4e-38 UniRef50_C6ALQ9 DNA transformation protein TfoX (Competence acti... 158 7e-38 UniRef50_B4W9C4 TfoX N-terminal domain superfamily n=1 Tax=Brevu... 115 9e-25 UniRef50_D0XP84 TfoX domain protein n=1 Tax=Brevundimonas subvib... 112 7e-24 UniRef50_A5EK31 Putative uncharacterized protein n=1 Tax=Bradyrh... 105 2e-21 UniRef50_A8IAK2 TfoX protein n=1 Tax=Azorhizobium caulinodans OR... 103 5e-21 UniRef50_B3T1X2 Putative TfoX N-terminal domain protein n=1 Tax=... 101 2e-20 UniRef50_A7MK87 Putative uncharacterized protein n=2 Tax=Cronoba... 99 1e-19 UniRef50_B2TNQ5 TfoX C-domain superfamily n=14 Tax=cellular orga... 95 1e-18 UniRef50_A9KSA6 TfoX domain protein n=14 Tax=Bacteria RepID=A9KS... 93 5e-18 UniRef50_A6LXZ3 TfoX, C-terminal domain protein n=7 Tax=cellular... 92 2e-17 Sequences not found previously or not previously below threshold: UniRef50_A6VL14 Regulator of competence-specific genes n=1 Tax=A... 137 2e-31 UniRef50_B9CWT0 Possible DNA transformation protein n=2 Tax=Acti... 128 8e-29 UniRef50_B8F752 DNA transformation protein, regulator of compete... 127 3e-28 UniRef50_B0CFX0 TfoX N-terminal domain protein n=1 Tax=Acaryochl... 102 8e-21 UniRef50_UPI00017468B2 TfoX N-terminal domain protein n=1 Tax=Ve... 97 3e-19 UniRef50_C6X8H0 TfoX domain protein n=1 Tax=Methylovorus sp. SIP... 96 9e-19 UniRef50_A6X160 TfoX domain protein n=2 Tax=Ochrobactrum RepID=A... 95 1e-18 UniRef50_B5EW93 TfoX C-terminal domain family protein n=1 Tax=Vi... 95 1e-18 UniRef50_Q1H056 TfoX-like protein n=1 Tax=Methylobacillus flagel... 94 2e-18 UniRef50_B3QH73 TfoX domain protein n=3 Tax=Rhodopseudomonas pal... 94 2e-18 UniRef50_Q21SS3 Regulator of competence-specific genes n=4 Tax=B... 93 6e-18 UniRef50_Q2IVS1 TfoX-like n=1 Tax=Rhodopseudomonas palustris HaA... 93 7e-18 UniRef50_Q2W7N9 Regulator of competence-specific gene n=2 Tax=Rh... 91 2e-17 UniRef50_A5EIP8 Putative uncharacterized protein n=2 Tax=Bradyrh... 91 2e-17 UniRef50_UPI0000384580 COG3070: Regulator of competence-specific... 91 2e-17 UniRef50_C5CTZ8 TfoX domain protein n=1 Tax=Variovorax paradoxus... 91 2e-17 UniRef50_B4D0P5 TfoX domain protein n=1 Tax=Chthoniobacter flavu... 89 8e-17 UniRef50_Q476T5 TfoX, N-terminal n=5 Tax=cellular organisms RepI... 88 2e-16 UniRef50_B2U777 TfoX domain protein n=6 Tax=Ralstonia RepID=B2U7... 88 2e-16 UniRef50_Q28PB9 TfoX-like protein n=8 Tax=Rhodobacterales RepID=... 87 4e-16 UniRef50_Q12FR8 TfoX-like n=2 Tax=Comamonadaceae RepID=Q12FR8_POLSJ 86 6e-16 UniRef50_Q0BYF8 TfoX domain protein n=1 Tax=Hyphomonas neptunium... 86 7e-16 UniRef50_UPI0001A44F59 hypothetical protein PcarcW_04384 n=1 Tax... 86 8e-16 UniRef50_A8ZSR2 TfoX domain protein n=1 Tax=Desulfococcus oleovo... 85 1e-15 UniRef50_B8J923 TfoX domain protein n=6 Tax=Proteobacteria RepID... 84 2e-15 UniRef50_B8GZ57 DNA transformation protein tfoX n=3 Tax=Caulobac... 83 5e-15 UniRef50_A7IPN3 TfoX domain protein n=1 Tax=Xanthobacter autotro... 83 8e-15 UniRef50_A1VWB7 TfoX, N-terminal domain protein n=1 Tax=Polaromo... 82 1e-14 UniRef50_B1Y642 TfoX domain protein n=1 Tax=Leptothrix cholodnii... 81 3e-14 UniRef50_B5ZNQ0 TfoX domain protein n=4 Tax=Rhizobium RepID=B5ZN... 80 5e-14 UniRef50_Q1YNM3 Putative uncharacterized protein n=1 Tax=Auranti... 79 1e-13 UniRef50_B0UFD5 TfoX domain protein n=16 Tax=Rhizobiales RepID=B... 78 2e-13 UniRef50_B0MI89 Putative uncharacterized protein n=1 Tax=Anaeros... 78 2e-13 UniRef50_A7H6Y4 TfoX domain protein n=1 Tax=Anaeromyxobacter sp.... 78 2e-13 UniRef50_UPI0001B4164C TfoX domain-containing protein n=1 Tax=Bu... 77 3e-13 UniRef50_Q399G3 TfoX-like protein n=47 Tax=Burkholderia RepID=Q3... 76 6e-13 UniRef50_Q89M48 Blr4345 protein n=1 Tax=Bradyrhizobium japonicum... 75 2e-12 UniRef50_B6QYJ7 Putative uncharacterized protein n=1 Tax=Pseudov... 74 3e-12 UniRef50_Q6D6U0 Putative uncharacterized protein n=1 Tax=Pectoba... 74 3e-12 UniRef50_Q46MJ2 TfoX, N-terminal n=1 Tax=Ralstonia eutropha JMP1... 73 7e-12 UniRef50_B0T8C1 TfoX domain protein n=1 Tax=Caulobacter sp. K31 ... 73 8e-12 UniRef50_A5FQ89 TfoX, N-terminal domain protein n=5 Tax=Dehaloco... 73 8e-12 UniRef50_B8DD74 TfoX domain protein n=15 Tax=Bacteria RepID=B8DD... 72 1e-11 UniRef50_C4GN11 Putative uncharacterized protein n=1 Tax=Kingell... 71 3e-11 UniRef50_B2JSG2 TfoX, N-terminal n=2 Tax=Burkholderia RepID=B2JS... 68 2e-10 UniRef50_A7JTH5 Possible competence regulator n=2 Tax=Mannheimia... 68 2e-10 UniRef50_B2SQ79 TfoX C-terminal domain family n=13 Tax=Xanthomon... 67 4e-10 UniRef50_A4YVE3 Putative uncharacterized protein n=1 Tax=Bradyrh... 67 5e-10 UniRef50_A5W959 TfoX, C-terminal domain protein n=15 Tax=Pseudom... 66 9e-10 UniRef50_Q21FA5 TfoX-like protein n=1 Tax=Saccharophagus degrada... 65 2e-09 UniRef50_C3L1N8 Putative uncharacterized protein n=4 Tax=Clostri... 65 2e-09 UniRef50_C6P678 TfoX domain protein n=1 Tax=Sideroxydans lithotr... 64 3e-09 UniRef50_C9A884 Predicted protein n=5 Tax=Firmicutes RepID=C9A88... 63 6e-09 UniRef50_D2R0U5 Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Pirell... 63 7e-09 UniRef50_C6VKM5 Putative uncharacterized protein n=3 Tax=Lactoba... 63 7e-09 UniRef50_A1S845 Putative regulatory protein, TfoX family n=2 Tax... 62 1e-08 UniRef50_C5CMJ9 TfoX domain protein n=1 Tax=Variovorax paradoxus... 62 1e-08 UniRef50_B3ENR6 TfoX domain protein n=2 Tax=Bacteria RepID=B3ENR... 62 2e-08 UniRef50_C1D080 Putative uncharacterized protein n=1 Tax=Deinoco... 61 2e-08 UniRef50_C3R3W1 TfoX n=2 Tax=Bacteroides RepID=C3R3W1_9BACE 61 2e-08 UniRef50_C2BTB0 Putative uncharacterized protein n=1 Tax=Mobilun... 61 3e-08 UniRef50_B3PJ08 TfoX C-terminal domain superfamily n=2 Tax=Gamma... 58 1e-07 UniRef50_A0YEW5 Putative uncharacterized protein n=1 Tax=marine ... 57 4e-07 UniRef50_C8SI00 TfoX domain protein n=1 Tax=Mesorhizobium opport... 57 4e-07 UniRef50_Q2RS88 Putative uncharacterized protein n=1 Tax=Rhodosp... 55 2e-06 UniRef50_A8GPA9 Putative uncharacterized protein n=1 Tax=Rickett... 55 2e-06 UniRef50_Q2SF07 Regulator of competence-specific genes n=1 Tax=H... 55 2e-06 UniRef50_C6MIE5 TfoX domain protein n=1 Tax=Nitrosomonas sp. AL2... 54 3e-06 UniRef50_C7PVA9 Putative uncharacterized protein n=1 Tax=Catenul... 54 4e-06 UniRef50_A3Y6J4 Putative uncharacterized protein n=1 Tax=Marinom... 52 9e-06 UniRef50_UPI0001698456 spermidine synthase n=1 Tax=Endoriftia pe... 52 1e-05 UniRef50_D2R5J8 TfoX domain protein n=1 Tax=Pirellula staleyi DS... 52 1e-05 UniRef50_C3JJ36 TfoX domain protein n=2 Tax=Rhodococcus erythrop... 50 5e-05 UniRef50_Q2KD12 Hypothetical conserved protein n=1 Tax=Rhizobium... 49 9e-05 UniRef50_A9M4D2 Cytidine and deoxycytidylate deaminase family pr... 49 1e-04 UniRef50_B2UPV3 TfoX domain protein n=1 Tax=Akkermansia muciniph... 49 1e-04 UniRef50_A6P212 Putative uncharacterized protein n=1 Tax=Bactero... 48 1e-04 UniRef50_Q0B3M2 TfoX, N-terminal domain protein n=10 Tax=Burkhol... 48 3e-04 UniRef50_B9Y4D8 Putative uncharacterized protein n=2 Tax=Firmicu... 47 4e-04 UniRef50_A5MZN3 Putative uncharacterized protein n=2 Tax=Clostri... 47 4e-04 UniRef50_A8F2A7 Regulator of competence-specific genes TfoX n=8 ... 47 5e-04 UniRef50_D0LJU3 Putative uncharacterized protein n=1 Tax=Haliang... 46 5e-04 UniRef50_B1CBH6 Putative uncharacterized protein n=1 Tax=Anaerof... 45 0.002 UniRef50_Q2BP97 Putative uncharacterized protein n=1 Tax=Neptuni... 45 0.002 UniRef50_A4BB23 Putative uncharacterized protein n=1 Tax=Reineke... 44 0.003 UniRef50_A6LTJ3 TfoX, N-terminal domain protein n=15 Tax=Clostri... 44 0.003 UniRef50_Q1GI25 TfoX domain protein n=16 Tax=Rhodobacterales Rep... 44 0.003 UniRef50_UPI0001C324A5 RNA methyltransferase TrmH, group 3 n=1 T... 44 0.003 UniRef50_C0D5B0 Putative uncharacterized protein n=1 Tax=Clostri... 44 0.003 UniRef50_C5EHW3 TfoX domain-containing protein n=2 Tax=Clostridi... 43 0.007 UniRef50_B9CN82 TfoX domain protein n=1 Tax=Atopobium rimae ATCC... 43 0.007 UniRef50_Q12WV8 Putative uncharacterized protein n=1 Tax=Methano... 41 0.030 UniRef50_A7VSF0 Putative uncharacterized protein n=1 Tax=Clostri... 40 0.045 UniRef50_Q65R00 Putative uncharacterized protein n=1 Tax=Mannhei... 39 0.097 >UniRef50_P75869 Protein sxy n=100 Tax=Enterobacteriaceae RepID=SXY_ECOLI Length = 209 Score = 264 bits (675), Expect = 1e-69, Method: Composition-based stats. Identities = 209/209 (100%), Positives = 209/209 (100%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC Sbjct: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK Sbjct: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE Sbjct: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 Query: 181 AALPVARRQELAEWADSLTPKQEFPAELE 209 AALPVARRQELAEWADSLTPKQEFPAELE Sbjct: 181 AALPVARRQELAEWADSLTPKQEFPAELE 209 >UniRef50_C6CPM3 Regulator of competence-specific genes n=12 Tax=Enterobacteriaceae RepID=C6CPM3_DICZE Length = 209 Score = 263 bits (673), Expect = 2e-69, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 127/209 (60%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK L KRI +++ + LG+I RS FG YS+ VD +FA+VS+GELYLRA + + Sbjct: 1 MKKLCEKRILQAKTVFSPLGSILSRSQFGGYSIAVDGVIFALVSNGELYLRAAPDNEAFF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + L Y K G V LNYY V E+LW+++ L+ L+ +L+ A ++K+ R RLK Sbjct: 61 LDRQTPKLIYTKRGLPVPLNYYLVGETLWQDESVLLELASCALEGARQDKAARMRCIRLK 120 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPN++ LE +L + GI+++ L LGAK +L+LR + ++ +L L GAI G+H+ Sbjct: 121 DLPNINHDLERLLWKAGIRNIDELHRLGAKTSYLKLRSVSQNLSVNVLLALAGAICGVHQ 180 Query: 181 AALPVARRQELAEWADSLTPKQEFPAELE 209 AALP R EL EW ++ + + P + Sbjct: 181 AALPQVVRSELIEWFENTSLRAIRPPRIN 209 >UniRef50_C6DKX7 Regulator of competence-specific genes n=2 Tax=Pectobacterium RepID=C6DKX7_PECCP Length = 206 Score = 241 bits (616), Expect = 9e-63, Method: Composition-based stats. Identities = 80/200 (40%), Positives = 119/200 (59%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK L KRI +SQ ++LG I RS FG YS+ + T+F +VS+GELYLRA ++ +Y Sbjct: 1 MKQLCKKRILQSQHSFSSLGDITSRSQFGGYSIAANKTIFGLVSEGELYLRASKKDERYF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + L Y K G + LNY+ VDE+LW+ L+ ++ +L A ++ + T RLK Sbjct: 61 QQRDMPHLIYTKRGMPLPLNYFLVDEALWQEPQTLLYFARLALAGAQHDQVLKCTSGRLK 120 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPN++ +E +L + GI++V L+ GAK +L LR+ + ++ +L L GAI G H+ Sbjct: 121 DLPNLNHDIERLLWKAGIRNVDELQHYGAKNSYLELRKVRANLSVNVLLALAGAICGTHQ 180 Query: 181 AALPVARRQELAEWADSLTP 200 AALP R EL EW + Sbjct: 181 AALPRGIRNELLEWYKNNAV 200 >UniRef50_A8GCM0 Regulator of competence-specific genes n=2 Tax=Serratia RepID=A8GCM0_SERP5 Length = 219 Score = 239 bits (610), Expect = 5e-62, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 113/199 (56%), Gaps = 1/199 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK S RI +++ Y LG I RS FG Y L D +FA++++GELYLRA + Sbjct: 1 MKGTSSGRIVQAKAYFYALGGITTRSQFGGYGLLADGVMFAVIAEGELYLRATDSLEPTF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKE-KSTRNTRERL 119 V + Y K G +T+ YY VDE+LWR++ +LV L+ ++ A +E K + + RL Sbjct: 61 RSRGMVNMVYSKRGVPITMRYYWVDETLWRDRRELVGLAWQAIREARRELKVKTDNQGRL 120 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 K LPN+ ++E +L GI +V LR+ GAK +LR+ QQ + ++L L GAI G H Sbjct: 121 KTLPNIDINMERLLWRAGIHNVYDLRLNGAKRSYLRMLQQQRNLGLRVLLSLGGAIAGYH 180 Query: 180 EAALPVARRQELAEWADSL 198 AALP R EL W + Sbjct: 181 HAALPSEMRSELTNWFERT 199 >UniRef50_C9Y0Q1 Protein sxy n=2 Tax=Cronobacter RepID=C9Y0Q1_CROTZ Length = 217 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 89/201 (44%), Positives = 125/201 (62%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M S + + Q L++LG + +RSLFG YSL ++D VFAM+ +G YLRA QS Y Sbjct: 14 MDKSSSDTLVRVQNTLSSLGNVTHRSLFGGYSLAINDAVFAMLVEGRFYLRASNQSRDYQ 73 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + H P L + GR ++LNYY VDE+LW + L ++ +L A EK+ R R+K Sbjct: 74 LAHNPPMLVCTRRGRHISLNYYLVDEALWNSPPLLREHARTALACAQAEKTERARERRVK 133 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 D+PN++ LE L E GI+DV L GAK CWL+LR+ ++ ++L+ L+GAIIG HE Sbjct: 134 DMPNLNVQLEVSLWEAGIRDVETLCAYGAKECWLKLRKARKNLSLQVLYALQGAIIGTHE 193 Query: 181 AALPVARRQELAEWADSLTPK 201 AALPV R+EL EW L+ + Sbjct: 194 AALPVHIREELLEWFMQLSVQ 214 >UniRef50_B5XY45 DNA transformation protein Sxy n=5 Tax=Klebsiella RepID=B5XY45_KLEP3 Length = 198 Score = 233 bits (594), Expect = 3e-60, Method: Composition-based stats. Identities = 100/197 (50%), Positives = 136/197 (69%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M+ L R + Q ++ LG + R LFG YSL +DDTVFAMV++G++YLRACEQSA Y Sbjct: 1 MRKLVCPRFPQFQACVSPLGQLHSRPLFGGYSLAIDDTVFAMVAEGDIYLRACEQSAAYR 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 V+H LT ++ GR V + YY++D++LWR++ +L RLS S +A +EK+ R RLK Sbjct: 61 VEHRNPLLTLRRHGRIVPMKYYQIDDALWRDETQLFRLSLLSWQSAQREKNHRRASGRLK 120 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPN+SFH+E L GI DVR LR +GA+ W RLR+ N+ ++ +L LEGAI+G+H Sbjct: 121 DLPNISFHMELQLIHAGIPDVRTLREVGAQQAWQRLRENNASLSLNVLLALEGAIVGVHA 180 Query: 181 AALPVARRQELAEWADS 197 AALP RRQEL EWA + Sbjct: 181 AALPTLRRQELLEWAGA 197 >UniRef50_C8Q7W7 Regulator of competence-specific genes protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q7W7_9ENTR Length = 199 Score = 232 bits (591), Expect = 7e-60, Method: Composition-based stats. Identities = 92/198 (46%), Positives = 121/198 (61%), Gaps = 1/198 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK S+ + +S+ +LA LG IE R+ FG Y+L+V+ VFA ++D LYLRACE Y Sbjct: 1 MKK-SHPMVEQSKTHLAALGDIESRTQFGGYTLSVEKVVFAFINDDALYLRACEAVTNYA 59 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + P L Y K G VTL+YY+VD LW+ +L++LS +L AA +E TR RLK Sbjct: 60 TQCPMEPLIYSKRGMPVTLSYYKVDTHLWQKPEQLMQLSASALRAAREELQTRYVSLRLK 119 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPN+S +E +L +VGI+ V+ L +GAK WL+LR N + K L LEGAI G HE Sbjct: 120 DLPNLSLRMEMMLHKVGIRSVKHLCEIGAKKSWLKLRAINKNIGLKTLLALEGAISGHHE 179 Query: 181 AALPVARRQELAEWADSL 198 AALP R EL W Sbjct: 180 AALPREVRDELCAWYQKT 197 >UniRef50_A7FJS6 DNA transformation protein tfoX n=30 Tax=Enterobacteriaceae RepID=A7FJS6_YERP3 Length = 211 Score = 226 bits (576), Expect = 4e-58, Method: Composition-based stats. Identities = 90/208 (43%), Positives = 116/208 (55%), Gaps = 5/208 (2%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK +S KRI ++Q LG I RS FG Y L V+ +FA+VS+GELYLRA + Sbjct: 1 MKIMSEKRIAQAQVRFGFLGQITIRSQFGGYGLLVNSIMFAVVSEGELYLRANDNIEDLF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKE-KSTRNTRERL 119 L Y K G V L YYRVD SLW + L+L + + + A + S + RL Sbjct: 61 RASGMANLVYAKRGLPVLLRYYRVDTSLWNDGLRLHHFVRQAYEGAKIDVLSKKGPVVRL 120 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 KDLPN+S LE +L +VGIK+ LR+ GAK C+L+LR + IL L GAI G H Sbjct: 121 KDLPNLSASLERLLWKVGIKNATELRLEGAKCCYLKLRALRRSLGINILLALAGAISGYH 180 Query: 180 EAALPVARRQELAEWADSLTPKQEFPAE 207 AALP+ R EL EW + K PA+ Sbjct: 181 YAALPLMMRSELIEWFE----KHIHPAK 204 >UniRef50_B2VDF5 Regulator of competence-specific genes n=3 Tax=Erwinia RepID=B2VDF5_ERWT9 Length = 209 Score = 218 bits (556), Expect = 8e-56, Method: Composition-based stats. Identities = 81/191 (42%), Positives = 115/191 (60%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHP 64 S ++I + ++ LA LG ++ R+ FG YSL+V+ TVFA+V++GE+YLRACE+ Y + Sbjct: 4 SRRKIAEVKQRLARLGEVKSRTQFGGYSLSVEKTVFAVVAEGEMYLRACERLQPYITERK 63 Query: 65 PVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPN 124 L+ K G SV L+YYRVD +LW + L+ S L A ++ R +RLKDLPN Sbjct: 64 MEALSLNKRGVSVELDYYRVDRALWSDDNLLLTFSHICLMEAQRQLQERQNNQRLKDLPN 123 Query: 125 MSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALP 184 + +E +L +VGI + L+ GAK CWLRL N V +LF L+GAI G H LP Sbjct: 124 LGIRMEMLLRQVGISSIEMLKRQGAKNCWLRLHACNKNVGLTVLFALQGAIAGRHYEVLP 183 Query: 185 VARRQELAEWA 195 ++EL W Sbjct: 184 RVEKEELRSWF 194 >UniRef50_C5BDN6 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=C5BDN6_EDWI9 Length = 207 Score = 218 bits (555), Expect = 1e-55, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 1/195 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK L ++ ++ A LG + RS FG + D +FA++++GELYLRA + ++C Sbjct: 1 MKGLQGEKHRVAESLFAALGRVLLRSQFGGQGVWCDGVMFALIAEGELYLRARDAQGRHC 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTR-NTRERL 119 Y K G V L YYRV+E++W+ +L L + SL A + R RL Sbjct: 61 EDCGMQPFIYTKRGFPVRLGYYRVEEAIWQQPQRLAILLQRSLQQARSDNDIRLAAMRRL 120 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 PN+S ++E L +GI+ + L+ +GA + +L++ N V +++LF LE A+ G H Sbjct: 121 HTRPNISINMERRLYRIGIRSLADLKRVGATQAFSQLKEANHQVGDRVLFDLEAAVQGCH 180 Query: 180 EAALPVARRQELAEW 194 A LP + L +W Sbjct: 181 SAVLPRPVSEALRQW 195 >UniRef50_D1NZX4 Regulator n=5 Tax=Enterobacteriaceae RepID=D1NZX4_9ENTR Length = 200 Score = 211 bits (537), Expect = 1e-53, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 108/199 (54%), Gaps = 2/199 (1%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 SL ++ QE L G ++ R+ FG Y L +++ + +V DG+ Y+R C + Y Sbjct: 2 SLQKEKNSLLQETLKQFGELKKRNHFGGYCLCINNILVGLVLDGQFYVRGCLFARSYFES 61 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE-RLKD 121 L Y K G + L YY++ E+ W N L + + + +A +E + + R+KD Sbjct: 62 VGLNRLIYSKKGVPLELRYYQLPENAWSNVEILSHIIELAYRSAHEEAQKKASATVRIKD 121 Query: 122 LPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSL-VTEKILFMLEGAIIGIHE 180 LPNM+ +E LG++GI L ++GAK C+L+L+Q ++ K+L L AI G H Sbjct: 122 LPNMNMSMERALGKIGIFRAEELVMIGAKACFLKLKQHGKQTLSVKLLIGLAAAIEGCHS 181 Query: 181 AALPVARRQELAEWADSLT 199 LPV +QEL +W ++++ Sbjct: 182 EVLPVRAKQELIKWFNNVS 200 >UniRef50_Q5E4H8 DNA transformation protein TfoX2 (Sxy) n=62 Tax=Vibrionales RepID=Q5E4H8_VIBF1 Length = 195 Score = 204 bits (518), Expect = 2e-51, Method: Composition-based stats. Identities = 58/194 (29%), Positives = 102/194 (52%), Gaps = 3/194 (1%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 + + S L++LG I RS+FG + + +DDT+FA+V +L+LRA +++ + Sbjct: 1 MDKPVLKDSLRLLSSLGKITSRSMFGGFGIFIDDTMFALVVQDKLHLRASDETINLFKEQ 60 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNT--RERLKD 121 YKK G V Y+ + W ++ + +LD A K+K + + R+KD Sbjct: 61 GFEPYVYKKRGFPVVTKYFAISPECWDEPDSILIQAVVALDVAKKDKEKQKSAGPSRIKD 120 Query: 122 LPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQ-QNSLVTEKILFMLEGAIIGIHE 180 LPN+ E +L + GI V L+ G+ + ++Q +S V++++L+ LEGAI G+H Sbjct: 121 LPNLRLATERMLKKAGITTVEELKNTGSVNAYKAIQQTHSSSVSDELLWSLEGAIKGMHW 180 Query: 181 AALPVARRQELAEW 194 + + R EL + Sbjct: 181 SVISAETRNELRKQ 194 >UniRef50_C2LJW4 Regulator of competence-specific genes n=3 Tax=Proteus RepID=C2LJW4_PROMI Length = 204 Score = 202 bits (515), Expect = 5e-51, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 1/203 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M L +R +A G + +S FG YSL VD+ +FA+ +D E YL+ + Sbjct: 1 MSILPEQRKAHLLSRVAEYGKLSKKSQFGGYSLMVDEVIFAITADNEFYLKGSGFAETLY 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKE-KSTRNTRERL 119 + Y K G +TL YYR+ +++WRN KL + ++ + +E + R+ Sbjct: 61 KANNMDAYVYLKKGIPITLRYYRITQAIWRNSAKLNQYIDFAYHYSTQEFLGQQKQPRRI 120 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 KDLPN+ LE L +VGI + LR +GAK C+L+L Q +L L GAI+G H Sbjct: 121 KDLPNLGIALEKKLNQVGINRIEELRTIGAKACYLKLIAQPKQGNSDLLLALAGAIVGCH 180 Query: 180 EAALPVARRQELAEWADSLTPKQ 202 + LP + EL W L+ K Sbjct: 181 RSVLPSQLKMELLNWYKELSVKS 203 >UniRef50_Q5E6F5 DNA transformation protein TfoX1 (Sxy) n=55 Tax=Vibrionales RepID=Q5E6F5_VIBF1 Length = 209 Score = 193 bits (490), Expect = 3e-48, Method: Composition-based stats. Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 3/184 (1%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 ++ LG RS+FG L +D +F++V+DG LY+R + + + K Sbjct: 25 NFVKKLGRFNKRSMFGGVGLFNEDAMFSLVTDGRLYVRGGGEVDARFEELGCERFKHVKK 84 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTR--ERLKDLPNMSFHLEA 131 T+NY+ V E + L+ + + +++ + E+ + ++ RL+DLPNM LE Sbjct: 85 TTIATVNYFDVTELFEKKPASLLSIVQEAMENSRLEREFKKSKENRRLRDLPNMQLTLER 144 Query: 132 ILGEVGIKDVRALRILGAKMCWLRLRQ-QNSLVTEKILFMLEGAIIGIHEAALPVARRQE 190 ++ + G+ DV + +GA + ++ V K+L+ GA G+H L +Q Sbjct: 145 MVKKAGVPDVDSFLEIGAVDVFKKVNHTYGGDVDVKLLWKFAGAESGVHWTLLQEPAKQA 204 Query: 191 LAEW 194 L + Sbjct: 205 LLQQ 208 >UniRef50_A7K3V4 DNA transformation protein TfoX n=6 Tax=Vibrionaceae RepID=A7K3V4_VIBSE Length = 195 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 3/182 (1%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 +Y+ + RS+FG L DD +FA+VS+ YLR + + + K Sbjct: 10 KYVRNFSEYQKRSMFGGIGLFTDDAMFALVSNDCCYLRGGNGLDEVFTQLNCEKYKHVKK 69 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNT--RERLKDLPNMSFHLEA 131 + T+NYY V + L L + S++ ++KE+ + + RL+DLPNM LE Sbjct: 70 QTTATVNYYDVTDLFESGYAGLDELVQKSIEYSIKERKYQKSSASRRLRDLPNMQLTLER 129 Query: 132 ILGEVGIKDVRALRILGAKMCWLRLR-QQNSLVTEKILFMLEGAIIGIHEAALPVARRQE 190 ++ + G+ DV LG + +++ + V K+L+ GA G+H + R+++ Sbjct: 130 MVKKAGVDDVETFLELGPVKVFNKVKVAYGNDVDVKLLWKFAGATDGVHWKLIQEPRKKQ 189 Query: 191 LA 192 L Sbjct: 190 LL 191 >UniRef50_D0IB87 DNA transformation protein TfoX n=3 Tax=Vibrionaceae RepID=D0IB87_VIBHO Length = 194 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 3/183 (1%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 EYL+ G E RS+FG V +FA+V + +YLR ++ Q + + K Sbjct: 10 EYLSQFGETEKRSMFGGTGFFVSGAMFALVKEDRIYLRGNDELTQQLIDKECKKFVHVKK 69 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTR--ERLKDLPNMSFHLEA 131 + +NYY + + L + K S++ ++ EK R+++ +RL+DLPN+ +E Sbjct: 70 SSTAIVNYYDITDLYEAKDQGLDAMVKKSVENSVAEKEYRDSKSNKRLRDLPNLRLTIER 129 Query: 132 ILGEVGIKDVRALRILGAKMCWLRLRQ-QNSLVTEKILFMLEGAIIGIHEAALPVARRQE 190 +L + G++DV + + + ++++ V K+L+M GA G+H L +Q+ Sbjct: 130 MLKKAGVEDVDTFFSMSPEELFRKVQEAHGYDVDVKLLWMFAGAQKGMHWTLLSEETKQQ 189 Query: 191 LAE 193 L Sbjct: 190 LLR 192 >UniRef50_C9NUS6 DNA transformation protein TfoX n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NUS6_9VIBR Length = 194 Score = 182 bits (461), Expect = 8e-45, Method: Composition-based stats. Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 4/183 (2%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 L +G I +FG + L D +FA++ +Y R + S + TYKK Sbjct: 8 NTLRPIGEITTTPMFGGFGLFKDKVMFALIHKEHIYFRFDDASQHTFEPEALIRFTYKKS 67 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYS-LDAALKEKSTRN--TRERLKDLPNMSFHLE 130 G S+T Y ES N ++ ++ + + A +++S+R +R+KDLPNM++++E Sbjct: 68 G-SITNTQYFTHESFKSNTALVLEHAQNALIRAEQRQQSSRVSFNEQRIKDLPNMTYNME 126 Query: 131 AILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQE 190 +L + G+ V AL+ LGA ++RL+++ V +K + ++GAI G H A L + R + Sbjct: 127 IMLKKSGVDSVTALKRLGALQSFVRLKKRFPEVGDKAVLSIQGAISGQHSAVLAKSERSK 186 Query: 191 LAE 193 L Sbjct: 187 LLR 189 >UniRef50_A6CYN5 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYN5_9VIBR Length = 204 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 6/197 (3%) Query: 7 KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACE-QSAQYCVKHPP 65 S + L I RS+FG + + +FA++ +LYLRA + + Sbjct: 3 DNFVDSIQAYTELKEISIRSVFGGKGVLSNGVMFALIKGNKLYLRAPNSKFKDEFSQLGC 62 Query: 66 VWLTY----KKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKD 121 + +YY + E++ ++ +L + L+EK + T R+KD Sbjct: 63 TPYEFHWRSSSRNYPSLSSYYSIPEAVKHCDKQIAKLCEEVWSVGLEEKRRKETPTRIKD 122 Query: 122 LPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRL-RQQNSLVTEKILFMLEGAIIGIHE 180 LPNM + E +L + GI + LR G + + + +LF + GA+ GIH Sbjct: 123 LPNMQYKTERMLRKAGIHSIDELREQGPVNAYKAVCGSHDKQPGINLLFYIAGALEGIHW 182 Query: 181 AALPVARRQELAEWADS 197 + LP R+ L+ A S Sbjct: 183 SILPETLRETLSRQAGS 199 >UniRef50_C9R7I0 DNA transformation protein TfoX (Competence activator) (Protein sxy) n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=C9R7I0_AGGAD Length = 211 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 39/189 (20%), Positives = 82/189 (43%), Gaps = 6/189 (3%) Query: 10 YKSQEYLATL--GTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVW 67 + + L G I ++LF + + +FA+ + ++LRA ++ Y V Sbjct: 6 QRLKNEFKQLVDGEISIKNLFTGHGIFHSGIMFALHQNDSIFLRAEDELVPYLESLGAVA 65 Query: 68 LTYKKCG--RSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRN--TRERLKDLP 123 + + YY++ S+ +N+ + K S+ A +K + +ER+K+L Sbjct: 66 YSIDPNNTNKLALHRYYQLPHSIRKNKPLFEKTVKLSIQQAKFKKVAEDLTKKERIKELA 125 Query: 124 NMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAAL 183 N S E +L ++ I V + +GA ++RL++ ++L+ L A+ H + L Sbjct: 126 NFSIKHERLLAKINIYTVSEFQKIGAIHSYVRLKKLGVSANVELLWTLCAALKNKHASLL 185 Query: 184 PVARRQELA 192 + + Sbjct: 186 TEKEKSAIL 194 >UniRef50_Q65Q52 TfoX protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65Q52_MANSM Length = 217 Score = 172 bits (436), Expect = 7e-42, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 82/172 (47%), Gaps = 3/172 (1%) Query: 21 TIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV-WLTYKKCGRSVTL 79 + + LF Y L +F +V D +L+A Q +Y K V W + K Sbjct: 22 EVTAKHLFVGYGLFYRKVMFGIVIDDNFFLKAENQLVEYVEKLGAVSWDIFNKNTNLAIS 81 Query: 80 NYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRN--TRERLKDLPNMSFHLEAILGEVG 137 +YYR+ +L N+ + L S+ ++ N +ER+K+LPN+S E +L ++G Sbjct: 82 SYYRLPRALVDNEEEFKTLVILSIKQQQRKILDLNIAKKERIKELPNLSIKHERLLAKIG 141 Query: 138 IKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQ 189 I +V+ + G C+++L+ V ++ ++ + A+ H + L + ++ Sbjct: 142 INNVKEFKSAGISNCFVKLKVHGFSVNVELFWLFQAALKNKHVSLLTKSEKK 193 >UniRef50_B0BSS9 Possible DNA transformation protein n=5 Tax=Pasteurellaceae RepID=B0BSS9_ACTPJ Length = 218 Score = 165 bits (417), Expect = 1e-39, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 5/199 (2%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVS--DGELYLRACEQSAQYC 60 ++S K+ +E + LG I ++S F + DDT+FA+ + LYLR Q Sbjct: 2 AISPKKFQYLKEIFSPLGEINFKSYFSYLGIFKDDTMFALYDHKNDRLYLRKSAQFYPDI 61 Query: 61 VKHPPVWLTYKKC-GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAAL--KEKSTRNTRE 117 ++ P+ + G+ + +Y + S+ N +++ K K + Sbjct: 62 IRTIPIHFLIDRRIGKQQSHIFYLIPSSIIHNLHLYTHWILSAIEEYQTAKAKLISQNKN 121 Query: 118 RLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIG 177 +++ LPN++ ++E +L + I V L+ +G +++L VTE LF L A+ Sbjct: 122 KIRLLPNLNINIERLLARIEIYTVDDLKNVGVINAFVKLIMLGLEVTELHLFKLYAALEH 181 Query: 178 IHEAALPVARRQELAEWAD 196 + L +Q L AD Sbjct: 182 KYIYMLSKQEKQSLLIEAD 200 >UniRef50_P43779 DNA transformation protein tfoX n=17 Tax=Haemophilus influenzae RepID=TFOX_HAEIN Length = 217 Score = 162 bits (409), Expect = 9e-39, Method: Composition-based stats. Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 4/184 (2%) Query: 19 LGTIEYRSLFGSYSLTV-DDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSV 77 +G + +++LF Y L ++T+FA+ + +LYLR A K T + + Sbjct: 19 VGNVSFKNLFTGYGLFHKEETMFAIWQNKKLYLRGEGVLAIQLTKLGCEPFTTNELNKRF 78 Query: 78 TLN-YYRVDESLWRNQLKLVRLSKYSLDAALKEK--STRNTRERLKDLPNMSFHLEAILG 134 L+ YY + + + R+ +L S+ L++K T RLKDLPN++ E L Sbjct: 79 VLSQYYALSDQILRSNRLCRKLIILSIKQILEQKLECTLRKLNRLKDLPNLTIKHERALI 138 Query: 135 EVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAEW 194 +VGI +V LR +GA+ + L++ S T + L A+ + L A ++ L + Sbjct: 139 KVGITNVAMLREIGAENALVELKKSGSGATLDFYWKLVCALQNKNSQMLSQAEKERLLKK 198 Query: 195 ADSL 198 + + Sbjct: 199 LNEV 202 >UniRef50_Q0I5V4 DNA transformation protein n=4 Tax=Pasteurellaceae RepID=Q0I5V4_HAES1 Length = 238 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 45/199 (22%), Positives = 93/199 (46%), Gaps = 4/199 (2%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV-WLTYKK 72 E +GTI ++LF Y L +F + G+ Y+RA ++ A+Y + +L Sbjct: 36 ELTELIGTITVKNLFSGYGLFKKGLMFGLYQQGKFYIRAEKELAKYLESLGALSYLALTP 95 Query: 73 CGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRN--TRERLKDLPNMSFHLE 130 + NYY + + + +N+ ++ S+ +K + ++R+KDLPN+S E Sbjct: 96 NPQLNIGNYYLLPKEITQNKEHFRQILYLSIAQTRAKKIAQELARKKRIKDLPNLSIKHE 155 Query: 131 AILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQE 190 +L ++ IKD+++ ++ GA C++ L+ V + + A++ + L +++ Sbjct: 156 RLLSKIHIKDIKSFKLKGAANCYIELKLSGIPVNLILFWNFTAALLYKNVNVLTKTEKEQ 215 Query: 191 -LAEWADSLTPKQEFPAEL 208 L + L P E+ Sbjct: 216 ALKKLNKGLERAGLKPVEI 234 >UniRef50_UPI0001BCFC5E putative DNA transformation protein n=2 Tax=Mannheimia haemolytica serotype A2 RepID=UPI0001BCFC5E Length = 221 Score = 160 bits (404), Expect = 4e-38, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 89/182 (48%), Gaps = 4/182 (2%) Query: 19 LGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVT 78 +GTI ++ F Y++ D + A+ +G YLR ++ +Y ++P + + + Sbjct: 27 IGTIRLKTYFSYYAVFKDGLMIALYQNGATYLRIAKKDIEYIRQYPETCILCDEKIGIQS 86 Query: 79 LNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER---LKDLPNMSFHLEAILGE 135 ++ + + L + K L + + L+ + + +++R +++LPNM+ LE +L + Sbjct: 87 RKFHYIPQVLIDDTPKFSSLL-FGIIEELRTEKYKISQKRATQIRNLPNMNLKLERMLKK 145 Query: 136 VGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAEWA 195 +GI + G +++L Q VTE +LF L GA+ + +++EL + A Sbjct: 146 IGIHSIHDFTQEGYMSTFIKLILQGFDVTEDLLFKLNGALNHQYIYTFTDQQKRELMQEA 205 Query: 196 DS 197 + Sbjct: 206 NQ 207 >UniRef50_C6ALQ9 DNA transformation protein TfoX (Competence activator) (Protein sxy) n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6ALQ9_AGGAN Length = 210 Score = 158 bits (401), Expect = 7e-38, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 4/172 (2%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWL--TYK 71 E+ + ++ ++LF + + D +FA+ +G +Y++A Y K V + Sbjct: 11 EFSELIEDVKVKNLFNGHGIFHQDIMFALHQNGSIYIKAEGDLVSYLEKLGAVAYAINHD 70 Query: 72 KCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRN--TRERLKDLPNMSFHL 129 + NYY++ S+ RN+ K + ++ A +K + +ER+K+L N S Sbjct: 71 SMKKLALYNYYQLPNSIRRNKEKFKEILILAIKQAKAKKLSDELSKKERIKELANFSIKH 130 Query: 130 EAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEA 181 E +L +V I V R LGA ++RL++ +L+ A+ H + Sbjct: 131 ERLLAKVNIYTVTEYRKLGAYHSFIRLKKLGIPANIDLLWTFIAALKNKHVS 182 >UniRef50_A6VL14 Regulator of competence-specific genes n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VL14_ACTSZ Length = 219 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 3/174 (1%) Query: 21 TIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTY-KKCGRSVTL 79 + + LF + + D T+FA+ ELYL+A A + + Y + Sbjct: 27 NVISKPLFIGHGIFYDGTMFAIYQKQELYLKADGDLANELLAYGSYPWAYIPRSNMKTGP 86 Query: 80 NYYRVDESLWRNQLKLVRLSKYSLDAALKEKS--TRNTRERLKDLPNMSFHLEAILGEVG 137 YY + +S+ +++ RL K S+ A +K +K L N++ E +L ++G Sbjct: 87 KYYHISDSIQNDEILYKRLVKLSIKQAKDQKRDIKLIKESSIKYLSNLTVKHERMLAKIG 146 Query: 138 IKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQEL 191 I V R GA ++ L + L++ +L+ A+ + L ++E+ Sbjct: 147 IFTVSEFREKGAIGAYVELIKSGMLLSINVLWKFVCALQNRNVLLLTDKEKEEI 200 >UniRef50_B9CWT0 Possible DNA transformation protein n=2 Tax=Actinobacillus minor RepID=B9CWT0_9PAST Length = 214 Score = 128 bits (323), Expect = 8e-29, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 80/191 (41%), Gaps = 3/191 (1%) Query: 10 YKSQEYLATL-GTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWL 68 E + G I ++ F Y + D +FA+ D +YLR ++++ V++ Sbjct: 9 QTVNEIFNPIIGDIRIKTYFSYYGIFSDGFMFALYKDDHIYLRTNQETSAAIQSIEGVFV 68 Query: 69 TYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTR--NTRERLKDLPNMS 126 T N+Y + S + + LD +E++ + + +++ L N++ Sbjct: 69 LDDLKAGIHTKNFYALPISYILSSTQFPAWVTSILDELRQERTRKEEKLKTQIRSLTNLN 128 Query: 127 FHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVA 186 +E IL + I +V + G ++ + +Q ++ +L+ L GA+ +L Sbjct: 129 MKIERILKRINIHNVDEFKQKGYLATFVDIIKQGDEGSDLLLYKLHGALEQKSVYSLTPE 188 Query: 187 RRQELAEWADS 197 + L + A+ Sbjct: 189 EKISLLQEANQ 199 >UniRef50_B8F752 DNA transformation protein, regulator of competence-specific genes n=2 Tax=Haemophilus parasuis RepID=B8F752_HAEPS Length = 212 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 82/200 (41%), Gaps = 5/200 (2%) Query: 1 MKSLSYKRIYKSQEYLATL-GTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQY 59 MK + K + L + G + ++ F Y + D +FA+ D + YL + Sbjct: 1 MKYIDAKT-QHIRNLLYPIIGETKAKTYFSYYGIMKDKAMFALYKDDKFYLHIPNHCLEE 59 Query: 60 CVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER- 118 + L + G ++ ++Y + L + ++ S+ L K + ++ Sbjct: 60 NIAKNLSLLLDSQTGINLK-SFYLIPPDLLNDLQQVSHWVVESVKDILHTKQNQYMEKKK 118 Query: 119 -LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIG 177 ++ LPNM+ LE L ++G+ + L G ++ L + + +LF L GAI Sbjct: 119 CIRTLPNMTIQLERTLKKLGVYSIDDLVDRGEIDIFVNLLKIGVDADQALLFRLHGAINR 178 Query: 178 IHEAALPVARRQELAEWADS 197 + + +Q L AD+ Sbjct: 179 QYIYTISDKTKQNLLNDADN 198 >UniRef50_B4W9C4 TfoX N-terminal domain superfamily n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W9C4_9CAUL Length = 118 Score = 115 bits (289), Expect = 9e-25, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 56/106 (52%), Gaps = 1/106 (0%) Query: 12 SQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTY- 70 +E+ A LG +E + +FG + +FA++ DG ++L+ E + V+ Y Sbjct: 11 VREHFAGLGLLEIKRMFGGAGVYASGVMFALLDDGVVWLKGDEALGEAFVEAGCRQFRYP 70 Query: 71 KKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTR 116 K GR++++ Y+ + E+ + + V ++ +L+ A+++ S + + Sbjct: 71 TKDGRTMSMGYWTLPETALDDPDEAVDWARRALEVAVRKASGKKPK 116 >UniRef50_D0XP84 TfoX domain protein n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XP84_9CAUL Length = 120 Score = 112 bits (281), Expect = 7e-24, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 60/107 (56%), Gaps = 1/107 (0%) Query: 12 SQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTY- 70 +E A LG +E + +FG ++ + +FA++ DG ++L+A E +A V+ T+ Sbjct: 11 VREQFAGLGPVEIKRMFGGAAVYANGLIFALLDDGVVWLKADETNAPLLVEAGARQFTFP 70 Query: 71 KKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE 117 K G+++++ Y+ + E + + V ++ S++ AL++ + + R+ Sbjct: 71 TKDGQTMSMAYWSMPEPAMDDPDESVAWARQSIEVALRKAAAKRPRK 117 >UniRef50_A5EK31 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EK31_BRASB Length = 126 Score = 105 bits (261), Expect = 2e-21, Method: Composition-based stats. Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 1/96 (1%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC-VKH 63 + + +E A LG+I R +FG + D + MV+D LYLR + + Sbjct: 4 TPDYVEFLREQFAPLGSITLRRMFGKTGIFHDGAMLGMVADNTLYLRVDDDNRAMFAEAQ 63 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLS 99 L Y+K G ++ L ++R+ + L+ + + S Sbjct: 64 SHPPLNYRKKGVAIDLAFWRIPDRLFDEPDEFISWS 99 >UniRef50_A8IAK2 TfoX protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAK2_AZOC5 Length = 143 Score = 103 bits (256), Expect = 5e-21, Method: Composition-based stats. Identities = 26/105 (24%), Positives = 47/105 (44%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 + LA LG +E + +FG + + D +FA+ S G+L+++A AQ L Y Sbjct: 8 DLLAPLGPVEIKRMFGGHGIFYDGRMFALESGGDLFIKADGDFAQELAALGCAPLGYTAR 67 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 R VTL Y+ + E+ + L + + A + ++ Sbjct: 68 NRQVTLPYWTLPEAALDDPEAREVLFRRAQGVARAGAVKKARGKK 112 >UniRef50_B0CFX0 TfoX N-terminal domain protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CFX0_ACAM1 Length = 120 Score = 102 bits (254), Expect = 8e-21, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 52/98 (53%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 E L L + R +FG + L V+ +FA+++D +YL+A ++ + V+ Y + Sbjct: 13 ERLNHLAPVSARPMFGGHGLYVEGVMFALIADERIYLKADGENQPFFVEAGSRPFIYDRK 72 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKS 111 + + ++YY + ++ N +L +++AAL+ ++ Sbjct: 73 EKPMVMSYYLLPIDIYENLDELKVWLDSAVEAALRNQA 110 >UniRef50_B3T1X2 Putative TfoX N-terminal domain protein n=1 Tax=uncultured marine microorganism HF4000_097M14 RepID=B3T1X2_9ZZZZ Length = 136 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 50/102 (49%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 + L +G + Y+ LFG Y++ D FA+V DG +Y + + + + LTY+K Sbjct: 33 DLLEPMGELSYKPLFGGYAICKHDAAFALVFDGAVYFKTDTTNRKDYESYNSNPLTYQKQ 92 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNT 115 G++++L+ V + +Q +L++ + + A K Sbjct: 93 GKTISLSNLEVPAEVIEDQDRLLQWANTAYKIAKNVKKKTKQ 134 >UniRef50_A7MK87 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MK87_ENTS8 Length = 130 Score = 98.9 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 61/112 (54%), Gaps = 6/112 (5%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVS-DGELYLRACEQSAQYCV 61 S+S + + + LA LG +E R +FG +L +FA++ D +LY++A +Q+ + + Sbjct: 2 SVSREYVTFVLDQLAPLGVVETRRMFGCVALFQAGRMFALLDGDAQLYIKADDQNRERFI 61 Query: 62 KHPPVWLTY---KKCG--RSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALK 108 TY ++ G + VTL YYR+ E L + +L+R + L AA++ Sbjct: 62 AEGFPPFTYVTTRRSGGQQEVTLGYYRIAEELVEDNQELLRWAHEGLAAAMR 113 >UniRef50_UPI00017468B2 TfoX N-terminal domain protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017468B2 Length = 136 Score = 97.3 bits (241), Expect = 3e-19, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 2/107 (1%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTY--K 71 + L LG + R +FG Y + + +F +VS YLR +++ + + Sbjct: 10 DLLTPLGDVTARKMFGGYGIYKEALMFGLVSQNRFYLRTDDETKDRFIDQGCEPFVFCLD 69 Query: 72 KCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 K G V YY E + N ++ + + AL+ +T+ R++ Sbjct: 70 KAGNPVVSKYYEPPEMAFANAQRMRPWATMGWECALRSVTTKAARKK 116 >UniRef50_C6X8H0 TfoX domain protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8H0_METSD Length = 123 Score = 95.8 bits (237), Expect = 9e-19, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 2/110 (1%) Query: 11 KSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTY 70 + A LG I R +FG ++L F +V D LYL+A ++A Y Sbjct: 7 YLPDIFALLGPISIRRMFGGHALYHQGLTFGLVFDETLYLKADAENAGDFQALALPRFGY 66 Query: 71 KKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEK--STRNTRER 118 +K GR + L YY+ + + ++ + + AAL+ K R +R Sbjct: 67 EKQGRWIDLPYYQAPDFILEDRDLAASWASKAYAAALRTKPLKPRRNSKR 116 >UniRef50_A6X160 TfoX domain protein n=2 Tax=Ochrobactrum RepID=A6X160_OCHA4 Length = 118 Score = 95.4 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 2/108 (1%) Query: 12 SQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTY- 70 ++ L G I R +FG + +FA+V EL +A E + + TY Sbjct: 6 LRDLLQDFGPISIRRMFGGKGIYHQGLIFALVVRDELLFKADEITIPDFIDAGATQWTYE 65 Query: 71 -KKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE 117 +K G + + Y+ V + + + ++ + DAAL+ + T+ ++ Sbjct: 66 GRKGGDPIAMPYWSVPSEAFDDPEVMTHWARLAYDAALRSEKTKPKKK 113 >UniRef50_B5EW93 TfoX C-terminal domain family protein n=1 Tax=Vibrio fischeri MJ11 RepID=B5EW93_VIBFM Length = 261 Score = 95.0 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 77/209 (36%), Gaps = 34/209 (16%) Query: 21 TIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHP---PVWLTYKKCGRSV 77 I YR LFG + T DT+F V +G LY R E + + K G+ Sbjct: 34 DIGYRHLFGGHLYTYKDTMFVKVYNGSLYFRIKEGLTNFWDNKGSSEFPLVNISKSGKRT 93 Query: 78 TLN------------------------------YYRVDESLWRNQLKLVRLSKYSLDAAL 107 +L +Y + S+ + L K S + Sbjct: 94 SLPTEKVTSLAIAIENPVSNPSKRPSYFSQNNFWYSIPSSITEKNE-MAELLKGSYLLCV 152 Query: 108 KEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKI 167 KE + L+ LPN++ ++ +L + IK++ L+ LGA + ++ + Sbjct: 153 KEDKEKARSNDLRKLPNITAAIKRMLVKADIKNITQLKTLGAVKSYRLIKIHYPKASYAN 212 Query: 168 LFMLEGAIIGIHEAALPVARRQELAEWAD 196 L+ L+ A+ H + L + R L + Sbjct: 213 LYALDAALQKKHVSLLSDSERNNLVRRYE 241 >UniRef50_B2TNQ5 TfoX C-domain superfamily n=14 Tax=cellular organisms RepID=B2TNQ5_CLOBB Length = 86 Score = 95.0 bits (235), Expect = 1e-18, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 45/81 (55%) Query: 116 RERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAI 175 L LPN+ +E+ L +VGI L+ +GA+ WL++++ + L LEGAI Sbjct: 1 MGELSKLPNIGKEVESQLNKVGIFTYDELKNIGAEQAWLKIQKNDVSACIHRLLALEGAI 60 Query: 176 IGIHEAALPVARRQELAEWAD 196 GI + ALP R++ L ++ + Sbjct: 61 QGIKKTALPQERKESLKDFYN 81 >UniRef50_Q1H056 TfoX-like protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H056_METFK Length = 108 Score = 94.2 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 24/90 (26%), Positives = 42/90 (46%) Query: 9 IYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWL 68 I +E L G I + +FG Y + D +FA+++D LYL+A +S + Sbjct: 5 ITHLEELLQGFGPIRAKRMFGGYGIYHDGLMFALIADDTLYLKADAESRKEFDSLGLPAF 64 Query: 69 TYKKCGRSVTLNYYRVDESLWRNQLKLVRL 98 Y K G+ VT++Y++ + + V Sbjct: 65 RYAKQGKEVTMSYFQAPADMLEAPEQAVYW 94 >UniRef50_B3QH73 TfoX domain protein n=3 Tax=Rhodopseudomonas palustris RepID=B3QH73_RHOPT Length = 168 Score = 94.2 bits (233), Expect = 2e-18, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 46/106 (43%), Gaps = 1/106 (0%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 + A G + R +F + ++ D FA+V +YLR A Y Sbjct: 8 DLFAPFGPVTIRRMFSGFGISADGVTFALVIRDAIYLRTDADGAARFEAEGSRPFRYDTR 67 Query: 74 GRSVTL-NYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 ++VT+ +Y+ + E L + +L ++ + AA + ++ ++ R Sbjct: 68 TKTVTVGSYWLLPERLLDDPDELAEWARSAHAAAERAALSKASKTR 113 >UniRef50_A9KSA6 TfoX domain protein n=14 Tax=Bacteria RepID=A9KSA6_CLOPH Length = 108 Score = 93.1 bits (230), Expect = 5e-18, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 49/85 (57%) Query: 112 TRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFML 171 T +L +LPN+ +E L EVGI++ L+ LGA+ WL++++ + L+ L Sbjct: 20 KEVTMAQLSNLPNIGKEVERQLNEVGIENYEQLKSLGAEAAWLKIQEIDESACIHRLYAL 79 Query: 172 EGAIIGIHEAALPVARRQELAEWAD 196 EGAI+GI + LP R+ EL + + Sbjct: 80 EGAILGIKKNLLPNERKSELKGFYN 104 >UniRef50_Q21SS3 Regulator of competence-specific genes n=4 Tax=Betaproteobacteria RepID=Q21SS3_RHOFD Length = 217 Score = 93.1 bits (230), Expect = 6e-18, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 75/195 (38%), Gaps = 22/195 (11%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 + LA G + R +FG Y L D +V D +L+L+ Q + Y + Sbjct: 13 DQLADCGAVTARKMFGEYCLYYDGRPVGLVCDNQLFLKNTVQGRGLLEEV-VEAAPYPRA 71 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSK-----YSLDAALKEKSTRNTRER---------- 118 + L W ++ L +L + SL A R + Sbjct: 72 RPHLLL-----TADQWDDRHNLCQLVRVTADALSLVEAPGPVKVRTAPAKPGGVAQGAAA 126 Query: 119 -LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIG 177 + LPN+ +L GI+ + L+ LG+ + + ++++ + + +L+ LEGA+ G Sbjct: 127 SVATLPNLGPKSRQMLEAAGIRTLAQLKKLGSVVAYAKVKRCSGSASLNLLWALEGALSG 186 Query: 178 IHEAALPVARRQELA 192 + + R L Sbjct: 187 LPWQVVAREHRTSLL 201 >UniRef50_Q2IVS1 TfoX-like n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IVS1_RHOP2 Length = 133 Score = 92.7 bits (229), Expect = 7e-18, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 1/86 (1%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 + + G + R +F + ++ D FA+V G +YLRA ++ Y Sbjct: 8 DLFSPFGPVTIRRMFSGFGISADGVNFALVIQGAIYLRADAETIPRFQAEGTAPFHYTTR 67 Query: 74 GRSVTL-NYYRVDESLWRNQLKLVRL 98 R+VT+ +Y+R+ + L + +L + Sbjct: 68 LRTVTVGSYWRLPDRLLDDPDELAQW 93 >UniRef50_A6LXZ3 TfoX, C-terminal domain protein n=7 Tax=cellular organisms RepID=A6LXZ3_CLOB8 Length = 86 Score = 91.5 bits (226), Expect = 2e-17, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 43/81 (53%) Query: 116 RERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAI 175 L LPN+ +E L +VGI L+ +GA+ WL++++ + L LEGAI Sbjct: 1 MGELSKLPNIGKEVERQLNQVGIFTYDELKAIGAEQAWLKIQEIDPSACIHRLLALEGAI 60 Query: 176 IGIHEAALPVARRQELAEWAD 196 GI + L R+++L ++ + Sbjct: 61 HGIKKTELSTKRKEDLKDFYN 81 >UniRef50_Q2W7N9 Regulator of competence-specific gene n=2 Tax=Rhodospirillaceae RepID=Q2W7N9_MAGSA Length = 177 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 50/107 (46%), Gaps = 1/107 (0%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 + L+ LG++ R++FG + + +D +F +++ L+L+A +++ + Sbjct: 66 DMLSPLGSVTARAMFGGFGVYLDGLMFGLIAWDTLFLKADDRNRPMFEEAGAGPFK-PWE 124 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + + + Y+ V + +L + + DAAL+ + + + L Sbjct: 125 DKPMAMPYWEVPADIMEEGAELCAWGRAAFDAALRTRKPKKVAKTLS 171 >UniRef50_A5EIP8 Putative uncharacterized protein n=2 Tax=Bradyrhizobium RepID=A5EIP8_BRASB Length = 182 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 1/109 (0%) Query: 11 KSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTY 70 E A G + R +F + ++ D FA+ LYLRA E S +Y Sbjct: 5 YLVELFAGFGPVTIRRMFSGFGISADGINFALALRSGLYLRADEASFAKFEAAGSQPFSY 64 Query: 71 KKCGRSVTLN-YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 + R++T+ Y++V L+ + + ++ + AA + ++ R Sbjct: 65 ETRARTMTVRSYWQVPAHLFDDADEFTLWAREAFVAAQTAALRKRSKTR 113 >UniRef50_UPI0000384580 COG3070: Regulator of competence-specific genes n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384580 Length = 112 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 49/102 (48%), Gaps = 1/102 (0%) Query: 16 LATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGR 75 L+ LG + ++FG + + +D +FA+++ LYL+A ++++ + + Sbjct: 2 LSPLGEVTASAMFGGFGIYLDGLMFALIAWDTLYLKADDRNSAMFEEAGSAPFK-PWEDK 60 Query: 76 SVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE 117 + + Y+ V + +L S+ + DAAL+ + + + Sbjct: 61 PMVMPYWEVPADVMEEAAQLCAWSRAAFDAALRTRKPKKPKR 102 >UniRef50_C5CTZ8 TfoX domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CTZ8_VARPS Length = 128 Score = 91.2 bits (225), Expect = 2e-17, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 50/100 (50%) Query: 9 IYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWL 68 + E LG IE R +FG + + + + A+V+ LYL++ SA++ K Sbjct: 5 VQSLHEVFERLGRIETRRMFGGHGVWHEGRMIALVAKDTLYLKSDAGSAEHFDKLDLPPF 64 Query: 69 TYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALK 108 TY + G+++ ++Y L+ ++ + + + +AAL+ Sbjct: 65 TYVREGKAMPMSYRLAPADLFEDREEAALWGRRAYEAALR 104 >UniRef50_B4D0P5 TfoX domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0P5_9BACT Length = 119 Score = 89.2 bits (220), Expect = 8e-17, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 43/100 (43%) Query: 9 IYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWL 68 + E L LGTI +S+FG + D+ FA+V+D Y++ + S Sbjct: 8 VEYLVEMLQPLGTIRVKSMFGGWGFYADERFFAIVADDGFYVKVDDVSRGEFEAFDLKPF 67 Query: 69 TYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALK 108 Y+ TL+YY + ++ L ++ + AA + Sbjct: 68 RYEVRDTKATLDYYEPPAAAMDDREMLCEWARKGIAAAER 107 >UniRef50_Q476T5 TfoX, N-terminal n=5 Tax=cellular organisms RepID=Q476T5_RALEJ Length = 120 Score = 87.7 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 1/98 (1%) Query: 17 ATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTY-KKCGR 75 A +G I R +FG + L D +FA+VSDG+ YL+A +++ Y G Sbjct: 22 ARIGAISARRMFGGHGLFYDGLMFALVSDGQCYLKADDKTLPRFEAESSHTFRYQSSRGE 81 Query: 76 SVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTR 113 +Y + + + ++ +++AAL+ + + Sbjct: 82 VALRHYLSLPAECLESPAAMTPWAQMAVEAALRLANQK 119 >UniRef50_B2U777 TfoX domain protein n=6 Tax=Ralstonia RepID=B2U777_RALPJ Length = 155 Score = 87.7 bits (216), Expect = 2e-16, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Query: 11 KSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTY 70 + + A +G I R +F +L DD VFA+V G YLR + + + + +Y Sbjct: 15 ELRPLAAQIGEIRARRMFSGAALYYDDIVFALVLRGTSYLRVDDLTRERFLAEKCTPFSY 74 Query: 71 KKCGRSVTL-NYYRVDESLWRNQLKLVRLSKYSLDAALKE 109 ++ GR++++ Y L ++ +++AAL++ Sbjct: 75 ERNGRTISMTGYLSTPAEALDGGQPLRDWARLAIEAALRD 114 >UniRef50_Q28PB9 TfoX-like protein n=8 Tax=Rhodobacterales RepID=Q28PB9_JANSC Length = 109 Score = 86.9 bits (214), Expect = 4e-16, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMV-SDGELYLRACEQSAQYCV 61 S+S + I + E +LG + R + G + T+FA++ SDG+LYL+ Sbjct: 2 SVSDEEIAHALELFDSLGDLTTRKMMGGLCIYHRGTIFALLMSDGQLYLKGAGDFHDVLK 61 Query: 62 KHPPVWLTYKKCG---RSVTLNYYRVDESLWRNQLKLVRLSKYSLD 104 TY++ G + + Y+ + ++ + + V ++ +L+ Sbjct: 62 DAGCTRWTYQREGAKRKPTAMPYWTMPDAALDDPEEAVAWARRALE 107 >UniRef50_Q12FR8 TfoX-like n=2 Tax=Comamonadaceae RepID=Q12FR8_POLSJ Length = 171 Score = 86.1 bits (212), Expect = 6e-16, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 8/114 (7%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSD----GELYLRACEQSAQYCVKHPPVWLT 69 E L+ +G R +FG Y ++ A+V+D +L+L+A + T Sbjct: 14 ELLSGVGPCVARRMFGGYGISTSGLTLALVADLGGGEKLWLKADADTRGRFEAAGCERFT 73 Query: 70 Y--KKCGRSV--TLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERL 119 Y + G + +LNYY E + +++ ++ SLD ALK +S ++ R R+ Sbjct: 74 YDITRNGERLAHSLNYYSAPEEAMESAQLMLQWARVSLDCALKARSAKSPRARV 127 >UniRef50_Q0BYF8 TfoX domain protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYF8_HYPNA Length = 125 Score = 86.1 bits (212), Expect = 7e-16, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 2/120 (1%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M E L+ G I R +FG + D +FA++SD ++Y++ Sbjct: 1 MAKAPDPLHEFVLELLSGAGAINIRRMFGGAGVYQDGVMFALLSDDQIYVKVDPALRADL 60 Query: 61 VKHPPVWLTYKKCG--RSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 + Y + + + L Y + S + + ++ +L AA K+ ++R Sbjct: 61 LAEGGAPFLYLRSSDAKPIDLGYVSLPSSAMDDPDEATVWARRALTAARAAKAKSPPKKR 120 >UniRef50_UPI0001A44F59 hypothetical protein PcarcW_04384 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A44F59 Length = 127 Score = 85.8 bits (211), Expect = 8e-16, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 52/120 (43%), Gaps = 6/120 (5%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSD-GELYLRACEQSAQYCVK 62 +S + + L+ LG R +FG ++ D + ++++ GE++++ +++ K Sbjct: 3 ISGELTAFIMDQLSPLGRFVPRKMFGCLAIFHDGLMVLLINNQGEVFVKTDDRNRSLFDK 62 Query: 63 HPPVWLTYKKCG-----RSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE 117 TY + G +++ L++ ++ + Q VR ++AA + + Sbjct: 63 VGCPPFTYTRRGEDGKLKTICLSFSQLPDDAMEEQETFVRWVASGIEAARRTARLKGKST 122 >UniRef50_A8ZSR2 TfoX domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSR2_DESOH Length = 110 Score = 85.0 bits (209), Expect = 1e-15, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 47/109 (43%), Gaps = 1/109 (0%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 +S + + + LA G + R +FG L D +F +++ +YL+ + + + V+ Sbjct: 3 VSNEFLIFVLDQLAEWGGVTARKMFGGAGLYRDGRMFGLIAGDVVYLKVDDSNREAFVRA 62 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKST 112 + V+L+YY V + +L+ + SL ++K Sbjct: 63 GSSAFK-PFADKPVSLSYYEVPPDVLEVPEELIDWAARSLAVQSRKKKK 110 >UniRef50_B8J923 TfoX domain protein n=6 Tax=Proteobacteria RepID=B8J923_ANAD2 Length = 206 Score = 84.2 bits (207), Expect = 2e-15, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 46/101 (45%), Gaps = 3/101 (2%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 +S + + + ++ LG ++ R +FG L D +F ++ EL+L+ ++ + ++ Sbjct: 3 ISPSFVDHAVDLVSALGPVQARRMFGGVGLYCDGLMFGLLDGDELFLKTDGETRPWFLEA 62 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLD 104 Y + +YYR + + ++ ++ +LD Sbjct: 63 GCRMWIYPGMYET---SYYRPPDEAHEDAEAMLPWARLALD 100 >UniRef50_B8GZ57 DNA transformation protein tfoX n=3 Tax=Caulobacter RepID=B8GZ57_CAUCN Length = 127 Score = 83.1 bits (204), Expect = 5e-15, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 2/98 (2%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 E LA LG + R +FG + + FA+++D LYL+ E + Sbjct: 21 ELLAPLGQVSARRMFGGVGIYANGLFFALIADDVLYLKGDEDLKVAFEAVGSQAFAPFED 80 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKS 111 G+ T+ Y+ +Q L+ ++ SL A +++ Sbjct: 81 GK--TMAYWTAPAEALDDQDLLLDWARKSLAVAARKQK 116 >UniRef50_A7IPN3 TfoX domain protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IPN3_XANP2 Length = 124 Score = 82.7 bits (203), Expect = 8e-15, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 1/83 (1%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 + + G + R +FG L D +FA+ G LYL+A A V +Y Sbjct: 8 DLFSAFGPVRTRRMFGGRGLYADGLMFAIEVGGTLYLKADADHAALLESRGSVPFSYLAK 67 Query: 74 GRSVTL-NYYRVDESLWRNQLKL 95 G T+ ++ V E+ + L Sbjct: 68 GAVRTMTGFWSVPEAALDDGDDL 90 >UniRef50_A1VWB7 TfoX, N-terminal domain protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VWB7_POLNA Length = 131 Score = 81.5 bits (200), Expect = 1e-14, Method: Composition-based stats. Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 4/99 (4%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSD----GELYLRACEQSAQYCVKHPPVWLT 69 E LA G R +FG Y ++ D +++D L+L+A + T Sbjct: 14 ELLAAAGPCTARHMFGGYGISTDGLTLGLLADLGQGATLWLKAGPDTRAVFEAAGCQRFT 73 Query: 70 YKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALK 108 Y+ G++ +L YY + + + ++ +L+ AL Sbjct: 74 YQAKGKTRSLGYYSAPDEAMESARDMAPWARLALEVALA 112 >UniRef50_B1Y642 TfoX domain protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y642_LEPCP Length = 134 Score = 80.8 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 1/96 (1%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 ++ + + E LA LG R +FG VDD A+++DG LYL+ QS Sbjct: 1 MAEELVNHVLELLAPLGRARSRRMFGGQGFYVDDLFIALIADGRLYLKVDAQSRAVFESA 60 Query: 64 PPVWLTYKKC-GRSVTLNYYRVDESLWRNQLKLVRL 98 Y++ G ++Y+ + + + Sbjct: 61 GCEPFAYQRAGGERAVMSYFSAPDDAMESPALMQPW 96 >UniRef50_B5ZNQ0 TfoX domain protein n=4 Tax=Rhizobium RepID=B5ZNQ0_RHILW Length = 126 Score = 80.0 bits (196), Expect = 5e-14, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 1/115 (0%) Query: 10 YKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLT 69 + +A G I+ R FG +L + F V G LYLR + Sbjct: 11 LEFASQIAPPGAIDIRRFFGGSALVRNGAQFGFVMKGTLYLRVDATMRAEFEADGSEPFS 70 Query: 70 YKKCGRSVTL-NYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLP 123 Y+ GR VT+ YY V + + L R S+ + DA + R+ LP Sbjct: 71 YRAAGREVTVRRYYAVPAHVIDDPSLLRRCSERAFDATTRPARKRSKATLAVSLP 125 >UniRef50_Q1YNM3 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YNM3_MOBAS Length = 129 Score = 78.8 bits (193), Expect = 1e-13, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Query: 12 SQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYK 71 +E A++ R +FG + D + A+V DGELYL++ ++ Y Sbjct: 6 LRELFASVPGFRIRRMFGEQGIYAGDRILALVVDGELYLKSDTETDAIYEAEGLRNWHYA 65 Query: 72 KCGR-SVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE 117 + GR V + YYR+ ++ + + + R + A+ + T+ + Sbjct: 66 RTGRSPVRMPYYRMPDAAFDDPDEAERWIALADGASRRAARTKGAAK 112 >UniRef50_B0UFD5 TfoX domain protein n=16 Tax=Rhizobiales RepID=B0UFD5_METS4 Length = 111 Score = 78.1 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 44/97 (45%), Gaps = 1/97 (1%) Query: 13 QEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYK- 71 +E + LG + R +FG + + A+ G+L L+A SA +Y Sbjct: 7 EEIFSGLGPVTVRRMFGGKGIYHGGRIVAVEVRGDLLLKADAASAPLFAAAGATQWSYAG 66 Query: 72 KCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALK 108 + G+++ + Y+ + + + + R + + +AAL+ Sbjct: 67 RKGQAIRMPYWSIPADAYDDPDAMARWVRLAHEAALR 103 >UniRef50_B0MI89 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MI89_9FIRM Length = 95 Score = 78.1 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%) Query: 116 RERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAI 175 LKDL N+ E L + GI L G+K WL++R + +L+ LEGA+ Sbjct: 11 MGELKDLENIGAKTEDQLNQAGIYTKEQLIKAGSKEAWLKIRAFDESACLHLLWGLEGAV 70 Query: 176 IGIHEAALPVARRQELAEWADSLT 199 GI + L R++L ++ D + Sbjct: 71 EGIKKKDLSPEVRKDLKDFFDDIN 94 >UniRef50_A7H6Y4 TfoX domain protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7H6Y4_ANADF Length = 140 Score = 78.1 bits (191), Expect = 2e-13, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 1/98 (1%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHP 64 S + + LA G +E R +FG + L +F ++ D EL+L+ + V Sbjct: 4 SEAFVEHVLDLLALAGPVEARRMFGGHGLYAGGAMFGLLDDDELFLKTDAVTRARFVDAG 63 Query: 65 PVWLTYKKC-GRSVTLNYYRVDESLWRNQLKLVRLSKY 101 Y + G + +Y+R + ++ ++ Sbjct: 64 CRPWFYARRDGTTERTSYFRPPDDAHEEPEAMLPWARL 101 >UniRef50_UPI0001B4164C TfoX domain-containing protein n=1 Tax=Burkholderia thailandensis E264 RepID=UPI0001B4164C Length = 167 Score = 77.3 bits (189), Expect = 3e-13, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 1/102 (0%) Query: 8 RIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVW 67 R + E L LG I F SL +D +F V G L+LR + + + Sbjct: 9 RADELAEQLDALGPIGVARFFSGASLRLDGVLFGFVHAGSLFLRVDDDTRAAFERAGMRP 68 Query: 68 LTYKKCGRSVTL-NYYRVDESLWRNQLKLVRLSKYSLDAALK 108 +Y R+V + YY + + L + + AA++ Sbjct: 69 FSYPGRTRTVVVGGYYETPADVLEDVGMLRDWCRDAYRAAVR 110 >UniRef50_Q399G3 TfoX-like protein n=47 Tax=Burkholderia RepID=Q399G3_BURS3 Length = 349 Score = 76.1 bits (186), Expect = 6e-13, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 1/94 (1%) Query: 15 YLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCG 74 LA LG + F ++ +D +F +S G L+LR + + V +Y++ Sbjct: 16 QLAPLGNVTVVRFFSGAAMRLDGVMFGFMSRGSLFLRVDDVNRPAFVAAGMGPFSYERPT 75 Query: 75 RSVTL-NYYRVDESLWRNQLKLVRLSKYSLDAAL 107 R+V+L YY + + L + + AAL Sbjct: 76 RTVSLDGYYEAPADVLEDAGALFDWCRSAYRAAL 109 >UniRef50_Q89M48 Blr4345 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89M48_BRAJA Length = 161 Score = 74.6 bits (182), Expect = 2e-12, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 1/106 (0%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 + A G + R +F Y ++ D T FA+ L+LRA E + Y Sbjct: 23 DLFADFGPVTIRKMFSGYGISADGTNFALALRAGLFLRADELTIPDFETEGSKPFQYSTR 82 Query: 74 GRSVTLN-YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 ++VT+N Y+ + L+ + +L + ++ +L AA + K + + + Sbjct: 83 AKTVTVNSYWELPARLFDDSQELAQWARAALAAAQRAKVKQRPKGK 128 >UniRef50_B6QYJ7 Putative uncharacterized protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QYJ7_9RHOB Length = 113 Score = 74.2 bits (181), Expect = 3e-12, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Query: 27 LFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDE 86 +FG + + +FA+V + LYL+A + + + ++ G N+Y V Sbjct: 1 MFGGHGYYANGKMFALVREKSLYLKAGSGNVADFLLTGQLPYIHQCFGEYFPTNFYSVPL 60 Query: 87 SLWRNQLKLVRLSKYSLDA-ALKEKSTRNT 115 + ++ +L + ++ EK+ + + Sbjct: 61 DVIEDEDQLTKWIAKAIRQLEQAEKTAKAS 90 >UniRef50_Q6D6U0 Putative uncharacterized protein n=1 Tax=Pectobacterium atrosepticum RepID=Q6D6U0_ERWCT Length = 113 Score = 73.8 bits (180), Expect = 3e-12, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 5/111 (4%) Query: 1 MKSLSYKRIYKSQEY---LATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSA 57 M L+ + ++ Y L+ I R LFG+ +L D VFAMV G LY + S Sbjct: 1 MTKLTGQGRALAEHYAGELSGWAPITTRPLFGAVALYRDGLVFAMVWKGSLYFKVDNASQ 60 Query: 58 QYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALK 108 V L Y +Y+ V + + +++ ++ + AALK Sbjct: 61 ADYVAAGSHALGYGND--HALKSYWEVPVDVIEDSERVLEWAQRAWSAALK 109 >UniRef50_Q46MJ2 TfoX, N-terminal n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MJ2_RALEJ Length = 138 Score = 72.7 bits (177), Expect = 7e-12, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 + L+ + + L+ +I R LFG+ +L ++ VFAMV G LY + E+S Sbjct: 4 LTKLTKELAAHFADQLSGWASITTRPLFGAVALYREEDVFAMVWQGSLYFKVSEESRGDF 63 Query: 61 VKHPPVWLTYKKCGRSVTL-NYYRVDESLWRNQLKLVRLSKYSLDAAL 107 L Y G+ L +Y+ V + ++ +L+ ++ + +AA Sbjct: 64 ETAGSHALGYVSEGQEHALKSYWEVPVDVIEDRKQLIVWAQRAWEAAK 111 >UniRef50_B0T8C1 TfoX domain protein n=1 Tax=Caulobacter sp. K31 RepID=B0T8C1_CAUSK Length = 86 Score = 72.7 bits (177), Expect = 8e-12, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 3/89 (3%) Query: 27 LFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDE 86 +FG L F ++ D LYL+ E L + G S + Y+ Sbjct: 1 MFGGVGLYAQGLFFGLIDDDTLYLKGDESLRPDFEAAGS--LQFAPFGMS-PMAYWSAPA 57 Query: 87 SLWRNQLKLVRLSKYSLDAALKEKSTRNT 115 +V ++ S+ A K+ + Sbjct: 58 EALDEPDLMVEWARRSIAVAAARKTRKAR 86 >UniRef50_A5FQ89 TfoX, N-terminal domain protein n=5 Tax=Dehalococcoides RepID=A5FQ89_DEHSB Length = 111 Score = 72.7 bits (177), Expect = 8e-12, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 9/98 (9%) Query: 9 IYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSD-GELYLRACEQSAQYCVKHPPVW 67 + + L+ L I+ R++FG Y + + +F +++D LY +A + + + Sbjct: 8 LQLVMDKLSALPEIDSRAMFGGYGIYSEGLMFGLLADENSLYFKAGDTNLADYASYGSHQ 67 Query: 68 LTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDA 105 + YY V ++ + ++ ++ S+ Sbjct: 68 FK--------PMPYYEVPADVFEDDGLFIKWAERSVMQ 97 >UniRef50_B8DD74 TfoX domain protein n=15 Tax=Bacteria RepID=B8DD74_LISMH Length = 89 Score = 71.9 bits (175), Expect = 1e-11, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 45/80 (56%) Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGI 178 L +LPN+ LE L + GIK L+ +G+K +LR+ + +S V L LEGA+ GI Sbjct: 10 LSELPNIGKVLEQDLIKAGIKTPGELKDVGSKEAFLRIWENDSSVCLSELCALEGAVQGI 69 Query: 179 HEAALPVARRQELAEWADSL 198 L A++ EL ++ SL Sbjct: 70 RWHDLDEAKKSELKKFHQSL 89 >UniRef50_C4GN11 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GN11_9NEIS Length = 110 Score = 70.7 bits (172), Expect = 3e-11, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 2/93 (2%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVS-DGELYLRACEQSAQYCVKHPPVWLTYKK 72 E LA LG I + +FG + A++S ELYL+ A Sbjct: 13 EQLAPLGGITRKRMFGGVGFCHYGAMVAILSRSNELYLKYPAPHADLGEPLISRRTDKTT 72 Query: 73 CG-RSVTLNYYRVDESLWRNQLKLVRLSKYSLD 104 G R + L YYR+ E+ N +L + ++ Sbjct: 73 GGIREIPLPYYRLPETALDNGDELRDWVRQAIA 105 >UniRef50_B2JSG2 TfoX, N-terminal n=2 Tax=Burkholderia RepID=B2JSG2_BURP8 Length = 118 Score = 68.0 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 ++ E LA + I RSLFG+ +L ++ VF MV G+LY + +++ Sbjct: 6 KINEDLAQYIIEQLALIDPISTRSLFGACALCRNEHVFGMVWKGDLYFKVDDENQNDYEI 65 Query: 63 HPPVWLTYKKCGRSVTLNYYR-VDESLWRNQLKLVRLSKYSLDAALK 108 L Y G L +R V + N+ +L ++ + AA+K Sbjct: 66 ANSHTLGYVSKGEERALKSFRAVPAEVVENREELRIWAEKAYRAAMK 112 >UniRef50_A7JTH5 Possible competence regulator n=2 Tax=Mannheimia haemolytica RepID=A7JTH5_PASHA Length = 105 Score = 67.7 bits (164), Expect = 2e-10, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 42/93 (45%), Gaps = 1/93 (1%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDG-ELYLRACEQSAQYCVKHPPVWLTYKK 72 + L+ + + + +FG Y L D+ + A++S ++++A Q+ + Y Sbjct: 12 DQLSPISGLRSKKMFGEYCLFFDNKIVAIISKDYRIFVKANPQTLPLFLAENAEQFHYFA 71 Query: 73 CGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDA 105 G+ ++Y+ + E +LV+ + L A Sbjct: 72 KGKVQKMHYWSIPELAIEEADELVKWIRLGLQA 104 >UniRef50_B2SQ79 TfoX C-terminal domain family n=13 Tax=Xanthomonadaceae RepID=B2SQ79_XANOP Length = 127 Score = 66.9 bits (162), Expect = 4e-10, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 2/84 (2%) Query: 124 NMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAAL 183 N+ A L +VG++ + L+ +GA ++++R+ + +L+ LEGA+ H + Sbjct: 3 NIGPKSAAWLRQVGLRTRQDLQEVGAVGAFVKVRRAGFKPSLNLLYSLEGALADCHWQDV 62 Query: 184 PVARRQELAEWADSLTPKQEFPAE 207 P ARR L ++ + P Sbjct: 63 PEARRHALLAEYEAAS--ALLPVR 84 >UniRef50_A4YVE3 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YVE3_BRASO Length = 67 Score = 66.9 bits (162), Expect = 5e-10, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQ 58 + I +E A LG IE R +FG + +D + MV+D LY R + + Sbjct: 4 TPDYIDFLREQFAPLGPIETRRMFGKTGIFIDGAMLGMVADNTLYFRVDDDIDR 57 >UniRef50_A5W959 TfoX, C-terminal domain protein n=15 Tax=Pseudomonas RepID=A5W959_PSEP1 Length = 92 Score = 65.7 bits (159), Expect = 9e-10, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 44/87 (50%) Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGI 178 L+ L N+ L GI LR LGA + ++ + ++ +L+ +EGA++ + Sbjct: 5 LQHLKNLGKTSAQWLHAAGIHSASDLRRLGAVGAYQAVKTRGFRASKVLLYAIEGALLDM 64 Query: 179 HEAALPVARRQELAEWADSLTPKQEFP 205 H LP+ R++ L + D+ P Q+ P Sbjct: 65 HWNDLPLERKEALNQQLDAKNPTQKKP 91 >UniRef50_Q21FA5 TfoX-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FA5_SACD2 Length = 92 Score = 65.0 bits (157), Expect = 2e-09, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 40/84 (47%) Query: 115 TRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGA 174 L DL N+ IL +G+ L +GA + R++ + V++ +L+ L+GA Sbjct: 4 PSNELLDLKNLGMASVNILHAIGVNTYEDLAQMGAVDAYCRIKSRGIHVSKVMLYALQGA 63 Query: 175 IIGIHEAALPVARRQELAEWADSL 198 ++ +H L + +L A+ L Sbjct: 64 LMDVHWNDLSPDLKSQLVAEAEQL 87 >UniRef50_C3L1N8 Putative uncharacterized protein n=4 Tax=Clostridium botulinum RepID=C3L1N8_CLOB6 Length = 80 Score = 64.6 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 32/55 (58%) Query: 142 RALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAEWAD 196 L+ +G + WL++++ +S L LEGAI G+ + ALP R+ EL ++ + Sbjct: 21 DELKDIGTEQAWLKIQEIDSSACIHRLLALEGAIQGVKKTALPQERKAELKDFYN 75 >UniRef50_C6P678 TfoX domain protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P678_9PROT Length = 101 Score = 63.8 bits (154), Expect = 3e-09, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 2/89 (2%) Query: 14 EYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC 73 E+LA LG + + + G + L + F + DG LY R + + K Sbjct: 12 EHLAGLGDLRCKRMCGGHGLYAGEKFFGIPFDGRLYFRTHPDTLPDFPARNAPVFSPSKK 71 Query: 74 GRSVTLNYYRVDESLWRNQLKLVRLSKYS 102 + NY+ V + + ++ + Sbjct: 72 --QILQNYHEVPADILEDSEFFPLWARKA 98 >UniRef50_C9A884 Predicted protein n=5 Tax=Firmicutes RepID=C9A884_ENTCA Length = 94 Score = 63.0 bits (152), Expect = 6e-09, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%) Query: 111 STRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLR-QQNSLVTEKILF 169 L+ LPN+ L L +GI LR A+ +L +R Q ++ +L+ Sbjct: 5 KKEKPMNELQKLPNVGQVLADHLVRIGINTSEQLRTKTAEEVFLAIRHQCDAGACLHMLY 64 Query: 170 MLEGAIIGIHEAALPVARRQELAEWADSLT 199 +EGAI GI +A L R+Q L + + L+ Sbjct: 65 GIEGAIQGIPKAQLTHQRKQALRLFFNQLS 94 >UniRef50_D2R0U5 Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0U5_9PLAN Length = 310 Score = 63.0 bits (152), Expect = 7e-09, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 1/99 (1%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M R Q+ + RS+FG + +FA+++ L+L+A + Sbjct: 1 MPVSESFRRLALQQLSRYAPQVTDRSMFGGVGIYSRGKMFALLAGDSLFLKAGPEDRATF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLS 99 V G VTL+YY + + L Sbjct: 61 VAAGLPPFQPFGEGG-VTLHYYEIPLDWLESGNALEPWV 98 >UniRef50_C6VKM5 Putative uncharacterized protein n=3 Tax=Lactobacillus plantarum RepID=C6VKM5_LACPJ Length = 94 Score = 62.6 bits (151), Expect = 7e-09, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 38/80 (47%) Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGI 178 L LPN+ L L V I L+ G+K+ + +++ N ++L+ L+ AI Sbjct: 14 LTTLPNIGPTLAKQLQAVAITTPEQLKSTGSKVAFTAIKKANPHACIQLLYSLQVAIENC 73 Query: 179 HEAALPVARRQELAEWADSL 198 L A R++L ++ SL Sbjct: 74 AYPQLSPATREDLKQFFRSL 93 >UniRef50_A1S845 Putative regulatory protein, TfoX family n=2 Tax=Shewanella RepID=A1S845_SHEAM Length = 92 Score = 61.9 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%) Query: 123 PNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAA 182 N+ A L E+GI + L LG+ LRL+Q V+ +L+ LEGA+ G H Sbjct: 8 ANLGPKSAAWLNEIGITSLEDLHCLGSIEVMLRLKQAGIPVSLNLLYALEGALEGRHWQD 67 Query: 183 LPVARRQEL-AEWADSLTP 200 + + EL W +L+ Sbjct: 68 VRRELKAELVLMWDAALSL 86 >UniRef50_C5CMJ9 TfoX domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CMJ9_VARPS Length = 120 Score = 61.9 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 1/94 (1%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M S + + + L+ + I FG L+ T FAMV G LY + + Sbjct: 1 MSQASPQFVDFIVDRLSGIDGITTNRFFGGTGLSAHATQFAMVMGGSLYFVVDKDTRPRY 60 Query: 61 VKHPPVWLTYKKCGRSVTLN-YYRVDESLWRNQL 93 K Y R V + Y+ V + + Sbjct: 61 EKLGSTCFAYDTKARRVQVRKYFEVPIEIIEDHE 94 >UniRef50_B3ENR6 TfoX domain protein n=2 Tax=Bacteria RepID=B3ENR6_CHLPB Length = 90 Score = 61.9 bits (149), Expect = 2e-08, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Query: 115 TRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKI---LFML 171 L +L N+ + ++L E GI + LR +G ++R+ + T + L+ Sbjct: 5 RNRPLAELKNIGRKIASLLNEAGIHSEQELRSVGPVEVHKKIRENHPDETLPLCYYLYSF 64 Query: 172 EGAIIGIHEAALPVARRQELAE 193 EGA+ H A+ R++EL E Sbjct: 65 EGALCDQHWDAIGEERKRELKE 86 >UniRef50_C1D080 Putative uncharacterized protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1D080_DEIDV Length = 88 Score = 61.5 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 28/73 (38%) Query: 122 LPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEA 181 L N+ +L VGI V LR +G + RL+ + +L+ + + G H Sbjct: 12 LLNLGDKSARMLSSVGIHTVGELRAVGPVEAYQRLQVMGERPSLTLLWAMVAGLRGEHWN 71 Query: 182 ALPVARRQELAEW 194 L + L Sbjct: 72 TLGHKEKLSLQRQ 84 >UniRef50_C3R3W1 TfoX n=2 Tax=Bacteroides RepID=C3R3W1_9BACE Length = 90 Score = 61.5 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 42/78 (53%), Gaps = 3/78 (3%) Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKI---LFMLEGAI 175 L++ N+ +E L E+GI + L + ++++R+Q+ T + L+ LEGA+ Sbjct: 9 LRNAKNIGATIEKYLNEIGIFTLADLAETTSVKAFIKIREQHPEKTIPVCYYLYSLEGAL 68 Query: 176 IGIHEAALPVARRQELAE 193 + +H +P ++EL + Sbjct: 69 LNLHWNDIPSELKKELKD 86 >UniRef50_C2BTB0 Putative uncharacterized protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BTB0_9ACTO Length = 108 Score = 60.7 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGI 178 L DLPN+ L L E GI L +G+ W R+ + L LEGAI G+ Sbjct: 31 LTDLPNIGPKLAQALIEAGIDTPAKLAEVGSVEAWWRV--HPRFTCQHSLLALEGAIQGV 88 Query: 179 HEAALPVARRQELAEW 194 ++ L R+ L + Sbjct: 89 PKSLLNQEIRERLRQE 104 >UniRef50_B3PJ08 TfoX C-terminal domain superfamily n=2 Tax=Gammaproteobacteria RepID=B3PJ08_CELJU Length = 98 Score = 58.4 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 40/75 (53%) Query: 122 LPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEA 181 L N+ IL +GI L+ GA + R++ ++ V++ +L+ L+GA++ +H Sbjct: 11 LKNLGMASVNILRAIGINTQADLKRTGAVEAYRRIKARDINVSKVMLYALQGALMDVHWN 70 Query: 182 ALPVARRQELAEWAD 196 L +++L E A+ Sbjct: 71 DLAPDLKRKLVEDAE 85 >UniRef50_A0YEW5 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YEW5_9GAMM Length = 90 Score = 57.3 bits (137), Expect = 4e-07, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%) Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGI 178 LK+L N S + L +G+K + L +GA + ++++ V+ +L+ L GA+I Sbjct: 8 LKNLGNTSIN---WLRSIGVKSQQDLERMGAVAAYNEIKRRGIRVSRVLLYALHGAMIDK 64 Query: 179 HEAALPVARRQELAEWAD 196 H L +Q L E AD Sbjct: 65 HWKDLDNDTKQSLLEQAD 82 >UniRef50_C8SI00 TfoX domain protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SI00_9RHIZ Length = 92 Score = 56.9 bits (136), Expect = 4e-07, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Query: 116 RERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLR-QQNSLVTEKILFMLEGA 174 R++D+ N+ + +L E+ I LR G + RL+ + VT L+ + A Sbjct: 2 STRIQDMRNLGPAMARMLAEIDILCEVDLRGFGVVEAYHRLKFRFGRQVTILALYSMGAA 61 Query: 175 IIGIHEAALPVARRQELAEWA 195 + G AL ++ L E A Sbjct: 62 LRGCDWRALDAETKEHLREQA 82 >UniRef50_Q2RS88 Putative uncharacterized protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RS88_RHORT Length = 121 Score = 54.6 bits (130), Expect = 2e-06, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 8/111 (7%) Query: 6 YKRIYKSQEYL----ATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCV 61 +R + L A LG +E R + + L +D +FA+VS G L+ R + + Sbjct: 4 KERGRYVRALLPVMRAALGQVESRDMTDATGLYLDGVLFALVSGGRLHFRTDPINREDYD 63 Query: 62 KHPPVWLTYKK---CGRSVTLNYYR-VDESLWRNQLKLVRLSKYSLDAALK 108 + + G +R V + + L + + + +AA + Sbjct: 64 RWEATSGRESEFFSGGLPAGGQKFRVVPPFVLDDGDTLAQWGRAAWEAAKR 114 >UniRef50_A8GPA9 Putative uncharacterized protein n=1 Tax=Rickettsia akari str. Hartford RepID=A8GPA9_RICAH Length = 89 Score = 54.6 bits (130), Expect = 2e-06, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 37/76 (48%) Query: 37 DTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLV 96 ++ ELY ++ + +Y Y+ G+ VTL+Y++V + +Q L Sbjct: 9 GVKVGIIKRNELYFKSELSTDEYLQSCRSEAFVYQSKGKFVTLSYWKVLPEIMEDQELLG 68 Query: 97 RLSKYSLDAALKEKST 112 + K +L+AA+ +K+ Sbjct: 69 KWFKLALNAAINKKNK 84 >UniRef50_Q2SF07 Regulator of competence-specific genes n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF07_HAHCH Length = 100 Score = 54.6 bits (130), Expect = 2e-06, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 1/80 (1%) Query: 118 RLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN-SLVTEKILFMLEGAII 176 RL+DL + E L ++G+ LR +G +LRL+Q + + L+ + GA+ Sbjct: 2 RLRDLKGLGPKSEKDLVDIGVDTPEKLREIGPVRAFLRLKQASARKPSLNFLYAMVGAVE 61 Query: 177 GIHEAALPVARRQELAEWAD 196 H + + + L + Sbjct: 62 DRHWMEIAKSEKTRLLTELE 81 >UniRef50_C6MIE5 TfoX domain protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIE5_9PROT Length = 104 Score = 54.2 bits (129), Expect = 3e-06, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 3/79 (3%) Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKI---LFMLEGAIIG 177 DL N+ + L EVGI L+ +GA +R+++ + + L+ EGA+ Sbjct: 9 DLKNIGKKIVGRLNEVGIFSEDDLKRVGAVEVHRLIRERHPGESLPVCYYLYSFEGALTD 68 Query: 178 IHEAALPVARRQELAEWAD 196 H + R+ +L Sbjct: 69 KHWGEIGAPRKHQLKTQIG 87 >UniRef50_C7PVA9 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PVA9_CATAD Length = 101 Score = 53.8 bits (128), Expect = 4e-06, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 1/85 (1%) Query: 124 NMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQ-QNSLVTEKILFMLEGAIIGIHEAA 182 N+ L L +VG+ + +R GA W + +L LEGA+ G + Sbjct: 15 NIGPVLTQRLRDVGVTTLDEVRERGAIEVWQLIAHTAEGNECAHMLLALEGALRGQRWTS 74 Query: 183 LPVARRQELAEWADSLTPKQEFPAE 207 +P + R L + + Sbjct: 75 IPRSERDALLVEVGLKDASELRAPK 99 >UniRef50_A3Y6J4 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6J4_9GAMM Length = 98 Score = 52.2 bits (124), Expect = 9e-06, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 31/83 (37%) Query: 110 KSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILF 169 K ++ R++DL E I +V I V + +L+++ ++ Sbjct: 5 KKQTASKNRIRDLKGFGPKSEEIFAKVDIHSVEDFMNAEPFALYAKLKREVKGTGLNSIY 64 Query: 170 MLEGAIIGIHEAALPVARRQELA 192 + GA H + ++ E+ Sbjct: 65 AIIGAREDRHWQEVARTQKSEIL 87 >UniRef50_UPI0001698456 spermidine synthase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698456 Length = 60 Score = 52.2 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 LFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTY-KKCGRSVTLNYYR 83 +FG D A++ + LYL+A + S+++ + +Y +K G+ +++ +Y Sbjct: 1 MFGDAGAYCDGLFCAILEEDSLYLKADDASSEHFRQVGQSSFSYQRKDGKQISMKFYS 58 >UniRef50_D2R5J8 TfoX domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5J8_9PLAN Length = 154 Score = 51.9 bits (123), Expect = 1e-05, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 33/77 (42%) Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGI 178 +++L N+ L ++G+ + LR LGA + +++ + + +L+ L + Sbjct: 74 IENLRNLGPTSCRWLHDMGVYTIDELRKLGAVDTFRIVKRSHPEASLNLLYALVAGLADR 133 Query: 179 HEAALPVARRQELAEWA 195 L +Q L A Sbjct: 134 DFRDLSEEEKQTLRSAA 150 >UniRef50_C3JJ36 TfoX domain protein n=2 Tax=Rhodococcus erythropolis RepID=C3JJ36_RHOER Length = 112 Score = 49.9 bits (118), Expect = 5e-05, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 7/99 (7%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 S S + + + E L L + R++FG Y L D+ + ++ L+++ E S ++ + Sbjct: 2 STSKETVARILEQLEPL-DVRARAMFGEYGLYCDEKIVGLICGDVLFVKPTEVSTEFGSE 60 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKY 101 +YYRV E ++ L + Sbjct: 61 ADLAP------PYPGAKDYYRVTEERLQDLDHLHAFIQR 93 >UniRef50_Q2KD12 Hypothetical conserved protein n=1 Tax=Rhizobium etli CFN 42 RepID=Q2KD12_RHIEC Length = 82 Score = 49.2 bits (116), Expect = 9e-05, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 1/62 (1%) Query: 45 DGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTL-NYYRVDESLWRNQLKLVRLSKYSL 103 G LYLR +Y+ GR V + YY V + + L R S+ +L Sbjct: 2 KGTLYLRVDAAMRAEFEADGAEPFSYRAAGREVRVRRYYAVPAHVIDDPWLLRRCSERAL 61 Query: 104 DA 105 A Sbjct: 62 HA 63 >UniRef50_A9M4D2 Cytidine and deoxycytidylate deaminase family protein n=26 Tax=Neisseriaceae RepID=A9M4D2_NEIM0 Length = 239 Score = 48.8 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%) Query: 123 PNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAA 182 P ++ A L +GI+ + LR G+ +L L+ +T+ L+ L+ + Sbjct: 5 PPLAPKTVAALHRLGIRTLEELRQNGSVKAFLLLKASGLTLTKSTLWQLQSLLDDTLPQE 64 Query: 183 LPVARRQELAEWADSLTPKQEFPAELE 209 + A + L + P FP++ E Sbjct: 65 MSQAHKARLLAELKNHPPVAAFPSQEE 91 >UniRef50_B2UPV3 TfoX domain protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UPV3_AKKM8 Length = 124 Score = 48.8 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 3/118 (2%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC-- 60 + S + L G I +R +FG Y L T F +V D +LY++ E + Sbjct: 7 ASSPDVVEYICFQLRHAGDISFRKMFGDYGLYCGRTFFGLVCDNQLYVKITEPGLKMFPQ 66 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 + + + L+ R+ SL R ++ L+ K+ S R Sbjct: 67 QEQGCPYPGARPHFLVTELDDDRILSSLVRETCSVLA-VPSVLEGKKKKASGEKRSRR 123 >UniRef50_A6P212 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P212_9BACE Length = 107 Score = 48.4 bits (114), Expect = 1e-04, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 24/59 (40%) Query: 9 IYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVW 67 + E L G I R +FG Y L DD FA++ D + +++ Q P Sbjct: 8 VDYVAEQLREAGAIRSRKMFGEYGLYCDDVFFAVICDDQFFVKVTPQGEVAFPHLPKAP 66 >UniRef50_Q0B3M2 TfoX, N-terminal domain protein n=10 Tax=Burkholderia RepID=Q0B3M2_BURCM Length = 120 Score = 47.6 bits (112), Expect = 3e-04, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 10/73 (13%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLR----------A 52 + S + E +A GT+ R +FG Y + D + A+V D L+++ A Sbjct: 15 ASSQGTVDFIVEQMALAGTVSARKMFGEYGIYCDGKMVALVCDDRLFVKPTYDGRAFVGA 74 Query: 53 CEQSAQYCVKHPP 65 C+++ Y P Sbjct: 75 CDEAPPYPAAKPH 87 >UniRef50_B9Y4D8 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B9Y4D8_9FIRM Length = 113 Score = 47.2 bits (111), Expect = 4e-04, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 27/59 (45%) Query: 9 IYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVW 67 + + LA GTI ++ +FG L D FA++ D +L+++ + A P Sbjct: 8 VTYVTDQLALAGTITWKRMFGEVGLYCDQVFFAVICDDQLFIKITPEVAARIPDCPKAP 66 >UniRef50_A5MZN3 Putative uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5MZN3_CLOK5 Length = 96 Score = 46.9 bits (110), Expect = 4e-04, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 21/39 (53%) Query: 133 LGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFML 171 + EVGI L+ +GA+ WL++++ ++ L L Sbjct: 1 MNEVGIFTYDELKDIGAEQAWLKIQEIDASACIHRLLAL 39 >UniRef50_A8F2A7 Regulator of competence-specific genes TfoX n=8 Tax=spotted fever group RepID=A8F2A7_RICM5 Length = 94 Score = 46.9 bits (110), Expect = 5e-04, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 19/44 (43%) Query: 10 YKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRAC 53 +E L G++ ++FG Y + + ++ ELY + Sbjct: 27 EYVKELLEPYGSVAVCAMFGGYGIYNGGVIIGIIKSNELYFKLD 70 >UniRef50_D0LJU3 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJU3_HALO1 Length = 133 Score = 46.5 bits (109), Expect = 5e-04, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 10/127 (7%) Query: 6 YKRIYKSQEYLATLGT----IEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCV 61 K ++E+L +L IE +++FG+ + ++ +FA ++ LR E + + + Sbjct: 4 PKTDPSAKEFLDSLLPPEPAIERKAMFGNTAAFLNGHMFAGTFGSDIILRLPESAREQLL 63 Query: 62 KH-PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAAL----KEKSTRNTR 116 GR + Y V + + + SL+ KE+ R Sbjct: 64 AEPGCQPFAPPPQGRVMR-EYVVVPRAWREHPERARPWLVTSLEWITSLPPKERRPRRKP 122 Query: 117 ERLKDLP 123 ++ K P Sbjct: 123 KQSKARP 129 >UniRef50_B1CBH6 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBH6_9FIRM Length = 113 Score = 44.5 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 S S + + E L LG I+ + +FG Y L F + D +L+++ + + Sbjct: 15 STSIEFVDYVYENLKPLGDIKCKKMFGEYGLWYKGKFFGCICDNQLFIKDTDSGRKIL 72 >UniRef50_Q2BP97 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP97_9GAMM Length = 75 Score = 44.5 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 1/71 (1%) Query: 124 NMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQ-NSLVTEKILFMLEGAIIGIHEAA 182 N+ L EV + D+ L+ +G + + V+ +L+ LEGA+ I Sbjct: 3 NIGPVSRRWLAEVDVYDLADLKQVGVIGTYRMVCAVKGKKVSLNLLWALEGALQEIDCRD 62 Query: 183 LPVARRQELAE 193 L + EL + Sbjct: 63 LSPECKAELKQ 73 >UniRef50_A4BB23 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BB23_9GAMM Length = 88 Score = 44.2 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 27/70 (38%) Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGI 178 L L + +A+L E+GI D + + + V+ +L+ + GA Sbjct: 4 LSSLMGLGQKSQAMLAEIGIVDTERFLASDPFELYRAMAEAGVPVSLNLLYAMIGAQEQC 63 Query: 179 HEAALPVARR 188 H + RR Sbjct: 64 HWQQVKRERR 73 >UniRef50_A6LTJ3 TfoX, N-terminal domain protein n=15 Tax=Clostridiales RepID=A6LTJ3_CLOB8 Length = 110 Score = 44.2 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 10/52 (19%), Positives = 23/52 (44%) Query: 9 IYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 + E ++ G I YR +FG Y + + + ++ D + +L+ + Sbjct: 8 VEYVCEQISGAGRITYRKMFGDYGIYCNQKIIGLICDNQFFLKITKGGRNLL 59 >UniRef50_Q1GI25 TfoX domain protein n=16 Tax=Rhodobacterales RepID=Q1GI25_SILST Length = 111 Score = 44.2 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 29/79 (36%) Query: 124 NMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAAL 183 N+ E GI LR LGA + +L Q S ++L A+ G Sbjct: 10 NLGPAYETACTRAGIHSAEELRALGADAAYGKLLQSGSKPHFIGYYVLVMALQGRPWNDC 69 Query: 184 PVARRQELAEWADSLTPKQ 202 ++ L + D+L + Sbjct: 70 KGEEKKVLRKRFDALKAQS 88 >UniRef50_UPI0001C324A5 RNA methyltransferase TrmH, group 3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C324A5 Length = 114 Score = 44.2 bits (103), Expect = 0.003, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 4/94 (4%) Query: 11 KSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLR-ACEQSAQYCVKHPPVWLT 69 + + LA G I R +FG + + V G L LR + + + + Sbjct: 10 RVRAALADAGEISERRMFGGVAFLSSGNMVCAVVGGRLLLRLGTDGTEAALREPHTRPMD 69 Query: 70 YKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSL 103 + GR + + L + +L Sbjct: 70 FT--GRPARGAIFVEPPGCATDPA-LRAWVERAL 100 >UniRef50_C0D5B0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5B0_9CLOT Length = 127 Score = 43.8 bits (102), Expect = 0.003, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%) Query: 15 YLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 L+ G I YR LFG Y L D F V +LYL+ E + Sbjct: 14 QLSGAGAITYRKLFGEYGLYCDGKFFGTVEGNQLYLKVTEAGRRLL 59 >UniRef50_C5EHW3 TfoX domain-containing protein n=2 Tax=Clostridiales RepID=C5EHW3_9FIRM Length = 119 Score = 43.0 bits (100), Expect = 0.007, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 21/49 (42%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLR 51 + S + LA G I Y+ LFG Y L F V D + Y++ Sbjct: 2 ASSLGYVQYVASQLAGAGVITYKKLFGEYGLWCGGKFFGTVEDNQFYVK 50 >UniRef50_B9CN82 TfoX domain protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN82_9ACTN Length = 107 Score = 43.0 bits (100), Expect = 0.007, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 7/109 (6%) Query: 10 YKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLT 69 +E + G I RS+ G Y + ++ + + D EL+L+ S + L Sbjct: 6 EYVREVFSVAGDIVIRSMMGGYLVYLNGKLIGDIGDNELFLKRTPTSDRLLADSE---LR 62 Query: 70 YKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 Y G ++ + + + ++ L ++K + RER Sbjct: 63 YPYEGSKTLMHVFD----RFEDTALVLELLDGMYAELPEKKPAKARRER 107 >UniRef50_Q12WV8 Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12WV8_METBU Length = 128 Score = 40.7 bits (94), Expect = 0.030, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 2/102 (1%) Query: 2 KSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCV 61 K S + EY+A E+R +FGS V +F V + LR E+ Q Sbjct: 5 KKASEELGELVGEYVAEY-DAEFRKMFGSPVHFVKGNMFVGVHGDGIMLRLKEEDQQKLY 63 Query: 62 KHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSL 103 + GR + Y + S++ ++++L + S Sbjct: 64 AEHDEATPFTPNGRRMR-EYAILPPSVYDDEMELRKWLDISY 104 >UniRef50_A7VSF0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSF0_9CLOT Length = 139 Score = 40.3 bits (93), Expect = 0.045, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%) Query: 18 TLGT-IEYRSLFGSYSLTVDDTVFAMVSDGELYLRA 52 LG + R +FG Y L FA V D +L+ +A Sbjct: 42 QLGEQVSCRRMFGEYGLFAHGKYFACVCDNQLFFKA 77 >UniRef50_Q65R00 Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65R00_MANSM Length = 128 Score = 39.1 bits (90), Expect = 0.097, Method: Composition-based stats. Identities = 7/59 (11%), Positives = 22/59 (37%) Query: 47 ELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDA 105 ++++ ++ V Y G+ ++Y+ + + + KL + + A Sbjct: 66 RIFVKTNAETLPVFQAKGAVQYEYFSRGKRQKMHYWSIPDEDVEEREKLQQWFDLGIKA 124 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C6CPM3 Regulator of competence-specific genes n=12 Tax=... 229 5e-59 UniRef50_P75869 Protein sxy n=100 Tax=Enterobacteriaceae RepID=S... 219 6e-56 UniRef50_C6DKX7 Regulator of competence-specific genes n=2 Tax=P... 214 2e-54 UniRef50_C9Y0Q1 Protein sxy n=2 Tax=Cronobacter RepID=C9Y0Q1_CROTZ 212 6e-54 UniRef50_A8GCM0 Regulator of competence-specific genes n=2 Tax=S... 212 7e-54 UniRef50_C8Q7W7 Regulator of competence-specific genes protein n... 205 5e-52 UniRef50_Q5E4H8 DNA transformation protein TfoX2 (Sxy) n=62 Tax=... 204 2e-51 UniRef50_A7FJS6 DNA transformation protein tfoX n=30 Tax=Enterob... 204 2e-51 UniRef50_C5BDN6 Putative uncharacterized protein n=2 Tax=Edwards... 200 3e-50 UniRef50_B5XY45 DNA transformation protein Sxy n=5 Tax=Klebsiell... 197 2e-49 UniRef50_B2VDF5 Regulator of competence-specific genes n=3 Tax=E... 195 9e-49 UniRef50_D1NZX4 Regulator n=5 Tax=Enterobacteriaceae RepID=D1NZX... 190 2e-47 UniRef50_C2LJW4 Regulator of competence-specific genes n=3 Tax=P... 190 2e-47 UniRef50_A6CYN5 Putative uncharacterized protein n=1 Tax=Vibrio ... 175 7e-43 UniRef50_Q5E6F5 DNA transformation protein TfoX1 (Sxy) n=55 Tax=... 174 1e-42 UniRef50_B0BSS9 Possible DNA transformation protein n=5 Tax=Past... 171 2e-41 UniRef50_A7K3V4 DNA transformation protein TfoX n=6 Tax=Vibriona... 171 2e-41 UniRef50_D0IB87 DNA transformation protein TfoX n=3 Tax=Vibriona... 171 2e-41 UniRef50_C9R7I0 DNA transformation protein TfoX (Competence acti... 170 4e-41 UniRef50_A6VL14 Regulator of competence-specific genes n=1 Tax=A... 169 7e-41 UniRef50_C9NUS6 DNA transformation protein TfoX n=1 Tax=Vibrio c... 167 3e-40 UniRef50_Q0I5V4 DNA transformation protein n=4 Tax=Pasteurellace... 165 7e-40 UniRef50_Q65Q52 TfoX protein n=1 Tax=Mannheimia succiniciproduce... 165 8e-40 UniRef50_B8F752 DNA transformation protein, regulator of compete... 162 6e-39 UniRef50_B9CWT0 Possible DNA transformation protein n=2 Tax=Acti... 162 7e-39 UniRef50_P43779 DNA transformation protein tfoX n=17 Tax=Haemoph... 159 4e-38 UniRef50_Q21SS3 Regulator of competence-specific genes n=4 Tax=B... 156 5e-37 UniRef50_UPI0001BCFC5E putative DNA transformation protein n=2 T... 155 6e-37 UniRef50_C6ALQ9 DNA transformation protein TfoX (Competence acti... 150 3e-35 UniRef50_Q2W7N9 Regulator of competence-specific gene n=2 Tax=Rh... 136 4e-31 UniRef50_B5EW93 TfoX C-terminal domain family protein n=1 Tax=Vi... 133 5e-30 UniRef50_B0CFX0 TfoX N-terminal domain protein n=1 Tax=Acaryochl... 125 7e-28 UniRef50_A6X160 TfoX domain protein n=2 Tax=Ochrobactrum RepID=A... 125 8e-28 UniRef50_C6X8H0 TfoX domain protein n=1 Tax=Methylovorus sp. SIP... 124 2e-27 UniRef50_UPI0000384580 COG3070: Regulator of competence-specific... 122 6e-27 UniRef50_B4W9C4 TfoX N-terminal domain superfamily n=1 Tax=Brevu... 122 8e-27 UniRef50_D0XP84 TfoX domain protein n=1 Tax=Brevundimonas subvib... 122 9e-27 UniRef50_UPI00017468B2 TfoX N-terminal domain protein n=1 Tax=Ve... 122 9e-27 UniRef50_B8J923 TfoX domain protein n=6 Tax=Proteobacteria RepID... 120 4e-26 UniRef50_B4D0P5 TfoX domain protein n=1 Tax=Chthoniobacter flavu... 120 5e-26 UniRef50_A5EIP8 Putative uncharacterized protein n=2 Tax=Bradyrh... 119 5e-26 UniRef50_A8IAK2 TfoX protein n=1 Tax=Azorhizobium caulinodans OR... 119 6e-26 UniRef50_A1VWB7 TfoX, N-terminal domain protein n=1 Tax=Polaromo... 118 1e-25 UniRef50_Q1H056 TfoX-like protein n=1 Tax=Methylobacillus flagel... 117 2e-25 UniRef50_A8ZSR2 TfoX domain protein n=1 Tax=Desulfococcus oleovo... 117 2e-25 UniRef50_C5CTZ8 TfoX domain protein n=1 Tax=Variovorax paradoxus... 116 3e-25 UniRef50_A5EK31 Putative uncharacterized protein n=1 Tax=Bradyrh... 115 8e-25 UniRef50_A7H6Y4 TfoX domain protein n=1 Tax=Anaeromyxobacter sp.... 115 9e-25 UniRef50_UPI0001A44F59 hypothetical protein PcarcW_04384 n=1 Tax... 115 1e-24 UniRef50_A7MK87 Putative uncharacterized protein n=2 Tax=Cronoba... 115 1e-24 UniRef50_Q476T5 TfoX, N-terminal n=5 Tax=cellular organisms RepI... 114 2e-24 UniRef50_B3QH73 TfoX domain protein n=3 Tax=Rhodopseudomonas pal... 114 2e-24 UniRef50_Q2IVS1 TfoX-like n=1 Tax=Rhodopseudomonas palustris HaA... 113 3e-24 UniRef50_B2U777 TfoX domain protein n=6 Tax=Ralstonia RepID=B2U7... 113 5e-24 UniRef50_Q12FR8 TfoX-like n=2 Tax=Comamonadaceae RepID=Q12FR8_POLSJ 112 6e-24 UniRef50_B8GZ57 DNA transformation protein tfoX n=3 Tax=Caulobac... 110 2e-23 UniRef50_B3T1X2 Putative TfoX N-terminal domain protein n=1 Tax=... 110 3e-23 UniRef50_B1Y642 TfoX domain protein n=1 Tax=Leptothrix cholodnii... 110 4e-23 UniRef50_Q0BYF8 TfoX domain protein n=1 Tax=Hyphomonas neptunium... 110 4e-23 UniRef50_UPI0001B4164C TfoX domain-containing protein n=1 Tax=Bu... 109 6e-23 UniRef50_Q28PB9 TfoX-like protein n=8 Tax=Rhodobacterales RepID=... 109 7e-23 UniRef50_Q46MJ2 TfoX, N-terminal n=1 Tax=Ralstonia eutropha JMP1... 108 1e-22 UniRef50_Q1YNM3 Putative uncharacterized protein n=1 Tax=Auranti... 106 3e-22 UniRef50_Q399G3 TfoX-like protein n=47 Tax=Burkholderia RepID=Q3... 106 5e-22 UniRef50_B0UFD5 TfoX domain protein n=16 Tax=Rhizobiales RepID=B... 105 7e-22 UniRef50_B5ZNQ0 TfoX domain protein n=4 Tax=Rhizobium RepID=B5ZN... 105 8e-22 UniRef50_Q6D6U0 Putative uncharacterized protein n=1 Tax=Pectoba... 103 5e-21 UniRef50_B2SQ79 TfoX C-terminal domain family n=13 Tax=Xanthomon... 101 1e-20 UniRef50_A7IPN3 TfoX domain protein n=1 Tax=Xanthobacter autotro... 101 2e-20 UniRef50_C6P678 TfoX domain protein n=1 Tax=Sideroxydans lithotr... 100 2e-20 UniRef50_B2JSG2 TfoX, N-terminal n=2 Tax=Burkholderia RepID=B2JS... 100 4e-20 UniRef50_A5W959 TfoX, C-terminal domain protein n=15 Tax=Pseudom... 100 4e-20 UniRef50_B2TNQ5 TfoX C-domain superfamily n=14 Tax=cellular orga... 100 6e-20 UniRef50_Q21FA5 TfoX-like protein n=1 Tax=Saccharophagus degrada... 99 7e-20 UniRef50_C5CMJ9 TfoX domain protein n=1 Tax=Variovorax paradoxus... 99 8e-20 UniRef50_A9KSA6 TfoX domain protein n=14 Tax=Bacteria RepID=A9KS... 99 1e-19 UniRef50_A7JTH5 Possible competence regulator n=2 Tax=Mannheimia... 98 1e-19 UniRef50_C4GN11 Putative uncharacterized protein n=1 Tax=Kingell... 98 2e-19 UniRef50_Q89M48 Blr4345 protein n=1 Tax=Bradyrhizobium japonicum... 97 5e-19 UniRef50_A5FQ89 TfoX, N-terminal domain protein n=5 Tax=Dehaloco... 96 6e-19 UniRef50_A6LXZ3 TfoX, C-terminal domain protein n=7 Tax=cellular... 95 1e-18 UniRef50_D2R0U5 Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Pirell... 95 1e-18 UniRef50_B0T8C1 TfoX domain protein n=1 Tax=Caulobacter sp. K31 ... 93 4e-18 UniRef50_B0MI89 Putative uncharacterized protein n=1 Tax=Anaeros... 93 5e-18 UniRef50_A1S845 Putative regulatory protein, TfoX family n=2 Tax... 93 8e-18 UniRef50_B6QYJ7 Putative uncharacterized protein n=1 Tax=Pseudov... 93 8e-18 UniRef50_B8DD74 TfoX domain protein n=15 Tax=Bacteria RepID=B8DD... 92 9e-18 UniRef50_B3PJ08 TfoX C-terminal domain superfamily n=2 Tax=Gamma... 90 4e-17 UniRef50_A0YEW5 Putative uncharacterized protein n=1 Tax=marine ... 88 1e-16 UniRef50_D2R5J8 TfoX domain protein n=1 Tax=Pirellula staleyi DS... 88 1e-16 UniRef50_C1D080 Putative uncharacterized protein n=1 Tax=Deinoco... 88 2e-16 UniRef50_B3ENR6 TfoX domain protein n=2 Tax=Bacteria RepID=B3ENR... 87 3e-16 UniRef50_C6MIE5 TfoX domain protein n=1 Tax=Nitrosomonas sp. AL2... 87 5e-16 UniRef50_C9A884 Predicted protein n=5 Tax=Firmicutes RepID=C9A88... 85 1e-15 UniRef50_C7PVA9 Putative uncharacterized protein n=1 Tax=Catenul... 85 1e-15 UniRef50_C6VKM5 Putative uncharacterized protein n=3 Tax=Lactoba... 84 3e-15 UniRef50_C8SI00 TfoX domain protein n=1 Tax=Mesorhizobium opport... 84 3e-15 UniRef50_C3R3W1 TfoX n=2 Tax=Bacteroides RepID=C3R3W1_9BACE 84 3e-15 UniRef50_C2BTB0 Putative uncharacterized protein n=1 Tax=Mobilun... 84 4e-15 UniRef50_Q2RS88 Putative uncharacterized protein n=1 Tax=Rhodosp... 82 1e-14 UniRef50_D0LJU3 Putative uncharacterized protein n=1 Tax=Haliang... 82 2e-14 UniRef50_A9M4D2 Cytidine and deoxycytidylate deaminase family pr... 82 2e-14 UniRef50_Q2SF07 Regulator of competence-specific genes n=1 Tax=H... 81 2e-14 UniRef50_A3Y6J4 Putative uncharacterized protein n=1 Tax=Marinom... 81 3e-14 UniRef50_B2UPV3 TfoX domain protein n=1 Tax=Akkermansia muciniph... 80 6e-14 UniRef50_C3JJ36 TfoX domain protein n=2 Tax=Rhodococcus erythrop... 79 7e-14 UniRef50_Q0B3M2 TfoX, N-terminal domain protein n=10 Tax=Burkhol... 77 5e-13 UniRef50_A4YVE3 Putative uncharacterized protein n=1 Tax=Bradyrh... 76 6e-13 UniRef50_B9Y4D8 Putative uncharacterized protein n=2 Tax=Firmicu... 76 1e-12 UniRef50_A6P212 Putative uncharacterized protein n=1 Tax=Bactero... 73 5e-12 UniRef50_A8GPA9 Putative uncharacterized protein n=1 Tax=Rickett... 72 9e-12 UniRef50_C3L1N8 Putative uncharacterized protein n=4 Tax=Clostri... 69 1e-10 UniRef50_UPI0001698456 spermidine synthase n=1 Tax=Endoriftia pe... 66 7e-10 UniRef50_Q2KD12 Hypothetical conserved protein n=1 Tax=Rhizobium... 65 2e-09 UniRef50_A8F2A7 Regulator of competence-specific genes TfoX n=8 ... 60 4e-08 UniRef50_A5MZN3 Putative uncharacterized protein n=2 Tax=Clostri... 52 1e-05 Sequences not found previously or not previously below threshold: UniRef50_Q2BP97 Putative uncharacterized protein n=1 Tax=Neptuni... 71 2e-11 UniRef50_Q1GI25 TfoX domain protein n=16 Tax=Rhodobacterales Rep... 65 2e-09 UniRef50_C8S2C6 TfoX domain protein n=1 Tax=Rhodobacter sp. SW2 ... 64 3e-09 UniRef50_A6LTJ3 TfoX, N-terminal domain protein n=15 Tax=Clostri... 64 3e-09 UniRef50_C0D5B0 Putative uncharacterized protein n=1 Tax=Clostri... 64 4e-09 UniRef50_B1CBH6 Putative uncharacterized protein n=1 Tax=Anaerof... 63 6e-09 UniRef50_C1ADW7 Putative uncharacterized protein n=1 Tax=Gemmati... 62 1e-08 UniRef50_A4BB23 Putative uncharacterized protein n=1 Tax=Reineke... 62 1e-08 UniRef50_A7VSF0 Putative uncharacterized protein n=1 Tax=Clostri... 60 6e-08 UniRef50_Q7NH59 Glr2678 protein n=3 Tax=Bacteria RepID=Q7NH59_GLOVI 59 8e-08 UniRef50_C5EHW3 TfoX domain-containing protein n=2 Tax=Clostridi... 59 9e-08 UniRef50_A8LIY0 TfoX domain protein n=15 Tax=Rhodobacterales Rep... 58 2e-07 UniRef50_Q65R00 Putative uncharacterized protein n=1 Tax=Mannhei... 57 5e-07 UniRef50_C7R6U9 TfoX domain protein n=5 Tax=Bacteria RepID=C7R6U... 56 1e-06 UniRef50_P22043 Uncharacterized 12.7 kDa protein in trpE 5'regio... 55 1e-06 UniRef50_Q0F1P7 TfoX-like protein n=1 Tax=Mariprofundus ferrooxy... 55 1e-06 UniRef50_C1B991 Putative uncharacterized protein n=1 Tax=Rhodoco... 55 2e-06 UniRef50_UPI0001C324A5 RNA methyltransferase TrmH, group 3 n=1 T... 54 4e-06 UniRef50_B9CN82 TfoX domain protein n=1 Tax=Atopobium rimae ATCC... 53 5e-06 UniRef50_Q12WV8 Putative uncharacterized protein n=1 Tax=Methano... 53 6e-06 UniRef50_C0CMT7 Putative uncharacterized protein n=1 Tax=Blautia... 52 1e-05 UniRef50_Q28RC0 TfoX-like protein n=1 Tax=Jannaschia sp. CCS1 Re... 51 3e-05 UniRef50_C7N2U0 Regulator of competence-specific genes n=2 Tax=C... 51 3e-05 UniRef50_B8HE86 Putative uncharacterized protein n=4 Tax=Actinom... 50 4e-05 UniRef50_B0MQR8 Putative uncharacterized protein n=1 Tax=Eubacte... 50 5e-05 UniRef50_D0WFB2 TfoX domain protein n=3 Tax=Bacteria RepID=D0WFB... 50 5e-05 UniRef50_A8TN06 Putative uncharacterized protein n=1 Tax=alpha p... 49 1e-04 UniRef50_C7N501 Regulator of competence-specific genes n=6 Tax=B... 48 2e-04 UniRef50_Q21LZ5 Putative uncharacterized protein n=1 Tax=Sacchar... 48 2e-04 UniRef50_C1C6S9 TfoX N-domain family protein n=18 Tax=Streptococ... 47 4e-04 UniRef50_D0RUB2 TfoX domain-containing protein n=6 Tax=Bacteria ... 46 6e-04 UniRef50_B2UWJ1 TfoX N-domain family protein n=21 Tax=Bacteria R... 46 7e-04 UniRef50_C9RQI1 TfoX domain protein n=1 Tax=Fibrobacter succinog... 46 9e-04 UniRef50_D1VMM1 Putative uncharacterized protein n=1 Tax=Frankia... 46 0.001 UniRef50_Q1B8A1 Putative uncharacterized protein n=19 Tax=Actino... 45 0.001 UniRef50_C5VLE3 TfoX domain protein n=11 Tax=Bacteria RepID=C5VL... 45 0.002 UniRef50_C0YI82 Group 3 RNA methyltransferase TrmH n=5 Tax=Bacte... 44 0.004 UniRef50_D0IZT0 Putative uncharacterized protein n=5 Tax=Comamon... 44 0.004 UniRef50_C9L3W9 TfoX domain protein n=8 Tax=Bacteria RepID=C9L3W... 43 0.005 UniRef50_B0MIB9 Putative uncharacterized protein n=1 Tax=Anaeros... 43 0.009 UniRef50_A2DZ36 Putative uncharacterized protein n=1 Tax=Trichom... 43 0.010 UniRef50_A6CBN6 RNA methyltransferase TrmH, group 3 n=1 Tax=Plan... 42 0.013 UniRef50_C7NAJ8 TfoX domain protein n=8 Tax=cellular organisms R... 41 0.018 UniRef50_A4CK91 Putative uncharacterized protein n=1 Tax=Robigin... 41 0.018 UniRef50_C1F7T1 ImpB/MucB/SamB family protein n=1 Tax=Acidobacte... 41 0.022 UniRef50_Q89D41 Blr7603 protein n=1 Tax=Bradyrhizobium japonicum... 40 0.039 UniRef50_A3YIF1 Putative uncharacterized protein n=1 Tax=Marinom... 40 0.042 UniRef50_Q21YH8 Putative uncharacterized protein n=1 Tax=Rhodofe... 40 0.049 UniRef50_A4ASY1 Putative uncharacterized protein n=1 Tax=Flavoba... 40 0.058 >UniRef50_C6CPM3 Regulator of competence-specific genes n=12 Tax=Enterobacteriaceae RepID=C6CPM3_DICZE Length = 209 Score = 229 bits (584), Expect = 5e-59, Method: Composition-based stats. Identities = 84/209 (40%), Positives = 127/209 (60%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK L KRI +++ + LG+I RS FG YS+ VD +FA+VS+GELYLRA + + Sbjct: 1 MKKLCEKRILQAKTVFSPLGSILSRSQFGGYSIAVDGVIFALVSNGELYLRAAPDNEAFF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + L Y K G V LNYY V E+LW+++ L+ L+ +L+ A ++K+ R RLK Sbjct: 61 LDRQTPKLIYTKRGLPVPLNYYLVGETLWQDESVLLELASCALEGARQDKAARMRCIRLK 120 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPN++ LE +L + GI+++ L LGAK +L+LR + ++ +L L GAI G+H+ Sbjct: 121 DLPNINHDLERLLWKAGIRNIDELHRLGAKTSYLKLRSVSQNLSVNVLLALAGAICGVHQ 180 Query: 181 AALPVARRQELAEWADSLTPKQEFPAELE 209 AALP R EL EW ++ + + P + Sbjct: 181 AALPQVVRSELIEWFENTSLRAIRPPRIN 209 >UniRef50_P75869 Protein sxy n=100 Tax=Enterobacteriaceae RepID=SXY_ECOLI Length = 209 Score = 219 bits (558), Expect = 6e-56, Method: Composition-based stats. Identities = 209/209 (100%), Positives = 209/209 (100%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC Sbjct: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK Sbjct: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE Sbjct: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 Query: 181 AALPVARRQELAEWADSLTPKQEFPAELE 209 AALPVARRQELAEWADSLTPKQEFPAELE Sbjct: 181 AALPVARRQELAEWADSLTPKQEFPAELE 209 >UniRef50_C6DKX7 Regulator of competence-specific genes n=2 Tax=Pectobacterium RepID=C6DKX7_PECCP Length = 206 Score = 214 bits (544), Expect = 2e-54, Method: Composition-based stats. Identities = 80/201 (39%), Positives = 119/201 (59%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK L KRI +SQ ++LG I RS FG YS+ + T+F +VS+GELYLRA ++ +Y Sbjct: 1 MKQLCKKRILQSQHSFSSLGDITSRSQFGGYSIAANKTIFGLVSEGELYLRASKKDERYF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + L Y K G + LNY+ VDE+LW+ L+ ++ +L A ++ + T RLK Sbjct: 61 QQRDMPHLIYTKRGMPLPLNYFLVDEALWQEPQTLLYFARLALAGAQHDQVLKCTSGRLK 120 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPN++ +E +L + GI++V L+ GAK +L LR+ + ++ +L L GAI G H+ Sbjct: 121 DLPNLNHDIERLLWKAGIRNVDELQHYGAKNSYLELRKVRANLSVNVLLALAGAICGTHQ 180 Query: 181 AALPVARRQELAEWADSLTPK 201 AALP R EL EW + Sbjct: 181 AALPRGIRNELLEWYKNNAVS 201 >UniRef50_C9Y0Q1 Protein sxy n=2 Tax=Cronobacter RepID=C9Y0Q1_CROTZ Length = 217 Score = 212 bits (540), Expect = 6e-54, Method: Composition-based stats. Identities = 89/201 (44%), Positives = 125/201 (62%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M S + + Q L++LG + +RSLFG YSL ++D VFAM+ +G YLRA QS Y Sbjct: 14 MDKSSSDTLVRVQNTLSSLGNVTHRSLFGGYSLAINDAVFAMLVEGRFYLRASNQSRDYQ 73 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + H P L + GR ++LNYY VDE+LW + L ++ +L A EK+ R R+K Sbjct: 74 LAHNPPMLVCTRRGRHISLNYYLVDEALWNSPPLLREHARTALACAQAEKTERARERRVK 133 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 D+PN++ LE L E GI+DV L GAK CWL+LR+ ++ ++L+ L+GAIIG HE Sbjct: 134 DMPNLNVQLEVSLWEAGIRDVETLCAYGAKECWLKLRKARKNLSLQVLYALQGAIIGTHE 193 Query: 181 AALPVARRQELAEWADSLTPK 201 AALPV R+EL EW L+ + Sbjct: 194 AALPVHIREELLEWFMQLSVQ 214 >UniRef50_A8GCM0 Regulator of competence-specific genes n=2 Tax=Serratia RepID=A8GCM0_SERP5 Length = 219 Score = 212 bits (540), Expect = 7e-54, Method: Composition-based stats. Identities = 79/199 (39%), Positives = 113/199 (56%), Gaps = 1/199 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK S RI +++ Y LG I RS FG Y L D +FA++++GELYLRA + Sbjct: 1 MKGTSSGRIVQAKAYFYALGGITTRSQFGGYGLLADGVMFAVIAEGELYLRATDSLEPTF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKE-KSTRNTRERL 119 V + Y K G +T+ YY VDE+LWR++ +LV L+ ++ A +E K + + RL Sbjct: 61 RSRGMVNMVYSKRGVPITMRYYWVDETLWRDRRELVGLAWQAIREARRELKVKTDNQGRL 120 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 K LPN+ ++E +L GI +V LR+ GAK +LR+ QQ + ++L L GAI G H Sbjct: 121 KTLPNIDINMERLLWRAGIHNVYDLRLNGAKRSYLRMLQQQRNLGLRVLLSLGGAIAGYH 180 Query: 180 EAALPVARRQELAEWADSL 198 AALP R EL W + Sbjct: 181 HAALPSEMRSELTNWFERT 199 >UniRef50_C8Q7W7 Regulator of competence-specific genes protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q7W7_9ENTR Length = 199 Score = 205 bits (523), Expect = 5e-52, Method: Composition-based stats. Identities = 92/198 (46%), Positives = 121/198 (61%), Gaps = 1/198 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK S+ + +S+ +LA LG IE R+ FG Y+L+V+ VFA ++D LYLRACE Y Sbjct: 1 MKK-SHPMVEQSKTHLAALGDIESRTQFGGYTLSVEKVVFAFINDDALYLRACEAVTNYA 59 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + P L Y K G VTL+YY+VD LW+ +L++LS +L AA +E TR RLK Sbjct: 60 TQCPMEPLIYSKRGMPVTLSYYKVDTHLWQKPEQLMQLSASALRAAREELQTRYVSLRLK 119 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPN+S +E +L +VGI+ V+ L +GAK WL+LR N + K L LEGAI G HE Sbjct: 120 DLPNLSLRMEMMLHKVGIRSVKHLCEIGAKKSWLKLRAINKNIGLKTLLALEGAISGHHE 179 Query: 181 AALPVARRQELAEWADSL 198 AALP R EL W Sbjct: 180 AALPREVRDELCAWYQKT 197 >UniRef50_Q5E4H8 DNA transformation protein TfoX2 (Sxy) n=62 Tax=Vibrionales RepID=Q5E4H8_VIBF1 Length = 195 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 3/195 (1%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 + + S L++LG I RS+FG + + +DDT+FA+V +L+LRA +++ + Sbjct: 1 MDKPVLKDSLRLLSSLGKITSRSMFGGFGIFIDDTMFALVVQDKLHLRASDETINLFKEQ 60 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNT--RERLKD 121 YKK G V Y+ + W ++ + +LD A K+K + + R+KD Sbjct: 61 GFEPYVYKKRGFPVVTKYFAISPECWDEPDSILIQAVVALDVAKKDKEKQKSAGPSRIKD 120 Query: 122 LPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQ-QNSLVTEKILFMLEGAIIGIHE 180 LPN+ E +L + GI V L+ G+ + ++Q +S V++++L+ LEGAI G+H Sbjct: 121 LPNLRLATERMLKKAGITTVEELKNTGSVNAYKAIQQTHSSSVSDELLWSLEGAIKGMHW 180 Query: 181 AALPVARRQELAEWA 195 + + R EL + Sbjct: 181 SVISAETRNELRKQL 195 >UniRef50_A7FJS6 DNA transformation protein tfoX n=30 Tax=Enterobacteriaceae RepID=A7FJS6_YERP3 Length = 211 Score = 204 bits (518), Expect = 2e-51, Method: Composition-based stats. Identities = 89/208 (42%), Positives = 116/208 (55%), Gaps = 5/208 (2%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK +S KRI ++Q LG I RS FG Y L V+ +FA+VS+GELYLRA + Sbjct: 1 MKIMSEKRIAQAQVRFGFLGQITIRSQFGGYGLLVNSIMFAVVSEGELYLRANDNIEDLF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRN-TRERL 119 L Y K G V L YYRVD SLW + L+L + + + A + ++ RL Sbjct: 61 RASGMANLVYAKRGLPVLLRYYRVDTSLWNDGLRLHHFVRQAYEGAKIDVLSKKGPVVRL 120 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 KDLPN+S LE +L +VGIK+ LR+ GAK C+L+LR + IL L GAI G H Sbjct: 121 KDLPNLSASLERLLWKVGIKNATELRLEGAKCCYLKLRALRRSLGINILLALAGAISGYH 180 Query: 180 EAALPVARRQELAEWADSLTPKQEFPAE 207 AALP+ R EL EW + K PA+ Sbjct: 181 YAALPLMMRSELIEWFE----KHIHPAK 204 >UniRef50_C5BDN6 Putative uncharacterized protein n=2 Tax=Edwardsiella RepID=C5BDN6_EDWI9 Length = 207 Score = 200 bits (508), Expect = 3e-50, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 104/198 (52%), Gaps = 1/198 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK L ++ ++ A LG + RS FG + D +FA++++GELYLRA + ++C Sbjct: 1 MKGLQGEKHRVAESLFAALGRVLLRSQFGGQGVWCDGVMFALIAEGELYLRARDAQGRHC 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTR-NTRERL 119 Y K G V L YYRV+E++W+ +L L + SL A + R RL Sbjct: 61 EDCGMQPFIYTKRGFPVRLGYYRVEEAIWQQPQRLAILLQRSLQQARSDNDIRLAAMRRL 120 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 PN+S ++E L +GI+ + L+ +GA + +L++ N V +++LF LE A+ G H Sbjct: 121 HTRPNISINMERRLYRIGIRSLADLKRVGATQAFSQLKEANHQVGDRVLFDLEAAVQGCH 180 Query: 180 EAALPVARRQELAEWADS 197 A LP + L +W Sbjct: 181 SAVLPRPVSEALRQWLQG 198 >UniRef50_B5XY45 DNA transformation protein Sxy n=5 Tax=Klebsiella RepID=B5XY45_KLEP3 Length = 198 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 100/197 (50%), Positives = 136/197 (69%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M+ L R + Q ++ LG + R LFG YSL +DDTVFAMV++G++YLRACEQSA Y Sbjct: 1 MRKLVCPRFPQFQACVSPLGQLHSRPLFGGYSLAIDDTVFAMVAEGDIYLRACEQSAAYR 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 V+H LT ++ GR V + YY++D++LWR++ +L RLS S +A +EK+ R RLK Sbjct: 61 VEHRNPLLTLRRHGRIVPMKYYQIDDALWRDETQLFRLSLLSWQSAQREKNHRRASGRLK 120 Query: 121 DLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHE 180 DLPN+SFH+E L GI DVR LR +GA+ W RLR+ N+ ++ +L LEGAI+G+H Sbjct: 121 DLPNISFHMELQLIHAGIPDVRTLREVGAQQAWQRLRENNASLSLNVLLALEGAIVGVHA 180 Query: 181 AALPVARRQELAEWADS 197 AALP RRQEL EWA + Sbjct: 181 AALPTLRRQELLEWAGA 197 >UniRef50_B2VDF5 Regulator of competence-specific genes n=3 Tax=Erwinia RepID=B2VDF5_ERWT9 Length = 209 Score = 195 bits (495), Expect = 9e-49, Method: Composition-based stats. Identities = 81/192 (42%), Positives = 115/192 (59%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 S ++I + ++ LA LG ++ R+ FG YSL+V+ TVFA+V++GE+YLRACE+ Y + Sbjct: 3 SSRRKIAEVKQRLARLGEVKSRTQFGGYSLSVEKTVFAVVAEGEMYLRACERLQPYITER 62 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLP 123 L+ K G SV L+YYRVD +LW + L+ S L A ++ R +RLKDLP Sbjct: 63 KMEALSLNKRGVSVELDYYRVDRALWSDDNLLLTFSHICLMEAQRQLQERQNNQRLKDLP 122 Query: 124 NMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAAL 183 N+ +E +L +VGI + L+ GAK CWLRL N V +LF L+GAI G H L Sbjct: 123 NLGIRMEMLLRQVGISSIEMLKRQGAKNCWLRLHACNKNVGLTVLFALQGAIAGRHYEVL 182 Query: 184 PVARRQELAEWA 195 P ++EL W Sbjct: 183 PRVEKEELRSWF 194 >UniRef50_D1NZX4 Regulator n=5 Tax=Enterobacteriaceae RepID=D1NZX4_9ENTR Length = 200 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 65/199 (32%), Positives = 108/199 (54%), Gaps = 2/199 (1%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 SL ++ QE L G ++ R+ FG Y L +++ + +V DG+ Y+R C + Y Sbjct: 2 SLQKEKNSLLQETLKQFGELKKRNHFGGYCLCINNILVGLVLDGQFYVRGCLFARSYFES 61 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE-RLKD 121 L Y K G + L YY++ E+ W N L + + + +A +E + + R+KD Sbjct: 62 VGLNRLIYSKKGVPLELRYYQLPENAWSNVEILSHIIELAYRSAHEEAQKKASATVRIKD 121 Query: 122 LPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSL-VTEKILFMLEGAIIGIHE 180 LPNM+ +E LG++GI L ++GAK C+L+L+Q ++ K+L L AI G H Sbjct: 122 LPNMNMSMERALGKIGIFRAEELVMIGAKACFLKLKQHGKQTLSVKLLIGLAAAIEGCHS 181 Query: 181 AALPVARRQELAEWADSLT 199 LPV +QEL +W ++++ Sbjct: 182 EVLPVRAKQELIKWFNNVS 200 >UniRef50_C2LJW4 Regulator of competence-specific genes n=3 Tax=Proteus RepID=C2LJW4_PROMI Length = 204 Score = 190 bits (483), Expect = 2e-47, Method: Composition-based stats. Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 1/203 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M L +R +A G + +S FG YSL VD+ +FA+ +D E YL+ + Sbjct: 1 MSILPEQRKAHLLSRVAEYGKLSKKSQFGGYSLMVDEVIFAITADNEFYLKGSGFAETLY 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKE-KSTRNTRERL 119 + Y K G +TL YYR+ +++WRN KL + ++ + +E + R+ Sbjct: 61 KANNMDAYVYLKKGIPITLRYYRITQAIWRNSAKLNQYIDFAYHYSTQEFLGQQKQPRRI 120 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 KDLPN+ LE L +VGI + LR +GAK C+L+L Q +L L GAI+G H Sbjct: 121 KDLPNLGIALEKKLNQVGINRIEELRTIGAKACYLKLIAQPKQGNSDLLLALAGAIVGCH 180 Query: 180 EAALPVARRQELAEWADSLTPKQ 202 + LP + EL W L+ K Sbjct: 181 RSVLPSQLKMELLNWYKELSVKS 203 >UniRef50_A6CYN5 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CYN5_9VIBR Length = 204 Score = 175 bits (444), Expect = 7e-43, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 6/197 (3%) Query: 7 KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACE-QSAQYCVKHPP 65 S + L I RS+FG + + +FA++ +LYLRA + + Sbjct: 3 DNFVDSIQAYTELKEISIRSVFGGKGVLSNGVMFALIKGNKLYLRAPNSKFKDEFSQLGC 62 Query: 66 VWLTY----KKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKD 121 + +YY + E++ ++ +L + L+EK + T R+KD Sbjct: 63 TPYEFHWRSSSRNYPSLSSYYSIPEAVKHCDKQIAKLCEEVWSVGLEEKRRKETPTRIKD 122 Query: 122 LPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRL-RQQNSLVTEKILFMLEGAIIGIHE 180 LPNM + E +L + GI + LR G + + + +LF + GA+ GIH Sbjct: 123 LPNMQYKTERMLRKAGIHSIDELREQGPVNAYKAVCGSHDKQPGINLLFYIAGALEGIHW 182 Query: 181 AALPVARRQELAEWADS 197 + LP R+ L+ A S Sbjct: 183 SILPETLRETLSRQAGS 199 >UniRef50_Q5E6F5 DNA transformation protein TfoX1 (Sxy) n=55 Tax=Vibrionales RepID=Q5E6F5_VIBF1 Length = 209 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 7/197 (3%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M L + ++ LG RS+FG L +D +F++V+DG LY+R + Sbjct: 16 MSHLEERFFNFVKK----LGRFNKRSMFGGVGLFNEDAMFSLVTDGRLYVRGGGEVDARF 71 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNT--RER 118 + + K T+NY+ V E + L+ + + +++ + E+ + + R Sbjct: 72 EELGCERFKHVKKTTIATVNYFDVTELFEKKPASLLSIVQEAMENSRLEREFKKSKENRR 131 Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQ-QNSLVTEKILFMLEGAIIG 177 L+DLPNM LE ++ + G+ DV + +GA + ++ V K+L+ GA G Sbjct: 132 LRDLPNMQLTLERMVKKAGVPDVDSFLEIGAVDVFKKVNHTYGGDVDVKLLWKFAGAESG 191 Query: 178 IHEAALPVARRQELAEW 194 +H L +Q L + Sbjct: 192 VHWTLLQEPAKQALLQQ 208 >UniRef50_B0BSS9 Possible DNA transformation protein n=5 Tax=Pasteurellaceae RepID=B0BSS9_ACTPJ Length = 218 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 5/199 (2%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMV--SDGELYLRACEQSAQYC 60 ++S K+ +E + LG I ++S F + DDT+FA+ + LYLR Q Sbjct: 2 AISPKKFQYLKEIFSPLGEINFKSYFSYLGIFKDDTMFALYDHKNDRLYLRKSAQFYPDI 61 Query: 61 VKHPPVWLTYKKC-GRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAAL--KEKSTRNTRE 117 ++ P+ + G+ + +Y + S+ N +++ K K + Sbjct: 62 IRTIPIHFLIDRRIGKQQSHIFYLIPSSIIHNLHLYTHWILSAIEEYQTAKAKLISQNKN 121 Query: 118 RLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIG 177 +++ LPN++ ++E +L + I V L+ +G +++L VTE LF L A+ Sbjct: 122 KIRLLPNLNINIERLLARIEIYTVDDLKNVGVINAFVKLIMLGLEVTELHLFKLYAALEH 181 Query: 178 IHEAALPVARRQELAEWAD 196 + L +Q L AD Sbjct: 182 KYIYMLSKQEKQSLLIEAD 200 >UniRef50_A7K3V4 DNA transformation protein TfoX n=6 Tax=Vibrionaceae RepID=A7K3V4_VIBSE Length = 195 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 7/196 (3%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M + + RS+FG L DD +FA+VS+ YLR + Sbjct: 1 MDMTDQAFFKYVRN----FSEYQKRSMFGGIGLFTDDAMFALVSNDCCYLRGGNGLDEVF 56 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNT--RER 118 + + K + T+NYY V + L L + S++ ++KE+ + + R Sbjct: 57 TQLNCEKYKHVKKQTTATVNYYDVTDLFESGYAGLDELVQKSIEYSIKERKYQKSSASRR 116 Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLR-QQNSLVTEKILFMLEGAIIG 177 L+DLPNM LE ++ + G+ DV LG + +++ + V K+L+ GA G Sbjct: 117 LRDLPNMQLTLERMVKKAGVDDVETFLELGPVKVFNKVKVAYGNDVDVKLLWKFAGATDG 176 Query: 178 IHEAALPVARRQELAE 193 +H + R+++L Sbjct: 177 VHWKLIQEPRKKQLLA 192 >UniRef50_D0IB87 DNA transformation protein TfoX n=3 Tax=Vibrionaceae RepID=D0IB87_VIBHO Length = 194 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 3/185 (1%) Query: 12 SQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYK 71 EYL+ G E RS+FG V +FA+V + +YLR ++ Q + + Sbjct: 8 FVEYLSQFGETEKRSMFGGTGFFVSGAMFALVKEDRIYLRGNDELTQQLIDKECKKFVHV 67 Query: 72 KCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTR--NTRERLKDLPNMSFHL 129 K + +NYY + + L + K S++ ++ EK R + +RL+DLPN+ + Sbjct: 68 KKSSTAIVNYYDITDLYEAKDQGLDAMVKKSVENSVAEKEYRDSKSNKRLRDLPNLRLTI 127 Query: 130 EAILGEVGIKDVRALRILGAKMCWLRLRQ-QNSLVTEKILFMLEGAIIGIHEAALPVARR 188 E +L + G++DV + + + ++++ V K+L+M GA G+H L + Sbjct: 128 ERMLKKAGVEDVDTFFSMSPEELFRKVQEAHGYDVDVKLLWMFAGAQKGMHWTLLSEETK 187 Query: 189 QELAE 193 Q+L Sbjct: 188 QQLLR 192 >UniRef50_C9R7I0 DNA transformation protein TfoX (Competence activator) (Protein sxy) n=1 Tax=Aggregatibacter actinomycetemcomitans D11S-1 RepID=C9R7I0_AGGAD Length = 211 Score = 170 bits (430), Expect = 4e-41, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 90/202 (44%), Gaps = 6/202 (2%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M ++S + + ++ + G I ++LF + + +FA+ + ++LRA ++ Y Sbjct: 1 MTTVSQRLKNEFKQLVD--GEISIKNLFTGHGIFHSGIMFALHQNDSIFLRAEDELVPYL 58 Query: 61 VKHPPVWLTYKKCG--RSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRN--TR 116 V + + YY++ S+ +N+ + K S+ A +K + + Sbjct: 59 ESLGAVAYSIDPNNTNKLALHRYYQLPHSIRKNKPLFEKTVKLSIQQAKFKKVAEDLTKK 118 Query: 117 ERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAII 176 ER+K+L N S E +L ++ I V + +GA ++RL++ ++L+ L A+ Sbjct: 119 ERIKELANFSIKHERLLAKINIYTVSEFQKIGAIHSYVRLKKLGVSANVELLWTLCAALK 178 Query: 177 GIHEAALPVARRQELAEWADSL 198 H + L + + + L Sbjct: 179 NKHASLLTEKEKSAILTKLNVL 200 >UniRef50_A6VL14 Regulator of competence-specific genes n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VL14_ACTSZ Length = 219 Score = 169 bits (428), Expect = 7e-41, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 87/211 (41%), Gaps = 6/211 (2%) Query: 5 SYKRIYKSQEYLATL--GTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 + E L L + + LF + + D T+FA+ ELYL+A A + Sbjct: 9 QAENTAVILELLRRLLNSNVISKPLFIGHGIFYDGTMFAIYQKQELYLKADGDLANELLA 68 Query: 63 HPPVWLTY-KKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKST--RNTRERL 119 + Y + YY + +S+ +++ RL K S+ A +K + Sbjct: 69 YGSYPWAYIPRSNMKTGPKYYHISDSIQNDEILYKRLVKLSIKQAKDQKRDIKLIKESSI 128 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 K L N++ E +L ++GI V R GA ++ L + L++ +L+ A+ + Sbjct: 129 KYLSNLTVKHERMLAKIGIFTVSEFREKGAIGAYVELIKSGMLLSINVLWKFVCALQNRN 188 Query: 180 EAALPVARRQEL-AEWADSLTPKQEFPAELE 209 L ++E+ + ++LT + ++ Sbjct: 189 VLLLTDKEKEEIGVKLNEALTKEGLRAIKIN 219 >UniRef50_C9NUS6 DNA transformation protein TfoX n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NUS6_9VIBR Length = 194 Score = 167 bits (422), Expect = 3e-40, Method: Composition-based stats. Identities = 55/189 (29%), Positives = 97/189 (51%), Gaps = 4/189 (2%) Query: 8 RIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVW 67 + L +G I +FG + L D +FA++ +Y R + S + Sbjct: 2 YLDSILNTLRPIGEITTTPMFGGFGLFKDKVMFALIHKEHIYFRFDDASQHTFEPEALIR 61 Query: 68 LTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYS-LDAALKEKSTRN--TRERLKDLPN 124 TYKK G S+T Y ES N ++ ++ + + A +++S+R +R+KDLPN Sbjct: 62 FTYKKSG-SITNTQYFTHESFKSNTALVLEHAQNALIRAEQRQQSSRVSFNEQRIKDLPN 120 Query: 125 MSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALP 184 M++++E +L + G+ V AL+ LGA ++RL+++ V +K + ++GAI G H A L Sbjct: 121 MTYNMEIMLKKSGVDSVTALKRLGALQSFVRLKKRFPEVGDKAVLSIQGAISGQHSAVLA 180 Query: 185 VARRQELAE 193 + R +L Sbjct: 181 KSERSKLLR 189 >UniRef50_Q0I5V4 DNA transformation protein n=4 Tax=Pasteurellaceae RepID=Q0I5V4_HAES1 Length = 238 Score = 165 bits (419), Expect = 7e-40, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 93/212 (43%), Gaps = 4/212 (1%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M E +GTI ++LF Y L +F + G+ Y+RA ++ A+Y Sbjct: 23 MTKSLKDTENIRSELTELIGTITVKNLFSGYGLFKKGLMFGLYQQGKFYIRAEKELAKYL 82 Query: 61 VKHPP-VWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRN--TRE 117 +L + NYY + + + +N+ ++ S+ +K + ++ Sbjct: 83 ESLGALSYLALTPNPQLNIGNYYLLPKEITQNKEHFRQILYLSIAQTRAKKIAQELARKK 142 Query: 118 RLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIG 177 R+KDLPN+S E +L ++ IKD+++ ++ GA C++ L+ V + + A++ Sbjct: 143 RIKDLPNLSIKHERLLSKIHIKDIKSFKLKGAANCYIELKLSGIPVNLILFWNFTAALLY 202 Query: 178 IHEAALPVARRQE-LAEWADSLTPKQEFPAEL 208 + L +++ L + L P E+ Sbjct: 203 KNVNVLTKTEKEQALKKLNKGLERAGLKPVEI 234 >UniRef50_Q65Q52 TfoX protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65Q52_MANSM Length = 217 Score = 165 bits (418), Expect = 8e-40, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 83/193 (43%), Gaps = 4/193 (2%) Query: 21 TIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWL-TYKKCGRSVTL 79 + + LF Y L +F +V D +L+A Q +Y K V + K Sbjct: 22 EVTAKHLFVGYGLFYRKVMFGIVIDDNFFLKAENQLVEYVEKLGAVSWDIFNKNTNLAIS 81 Query: 80 NYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTR--NTRERLKDLPNMSFHLEAILGEVG 137 +YYR+ +L N+ + L S+ ++ +ER+K+LPN+S E +L ++G Sbjct: 82 SYYRLPRALVDNEEEFKTLVILSIKQQQRKILDLNIAKKERIKELPNLSIKHERLLAKIG 141 Query: 138 IKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVAR-RQELAEWAD 196 I +V+ + G C+++L+ V ++ ++ + A+ H + L + + L Sbjct: 142 INNVKEFKSAGISNCFVKLKVHGFSVNVELFWLFQAALKNKHVSLLTKSEKKSALLVLNR 201 Query: 197 SLTPKQEFPAELE 209 L + E Sbjct: 202 KLVEAGFREIKHE 214 >UniRef50_B8F752 DNA transformation protein, regulator of competence-specific genes n=2 Tax=Haemophilus parasuis RepID=B8F752_HAEPS Length = 212 Score = 162 bits (411), Expect = 6e-39, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 82/200 (41%), Gaps = 5/200 (2%) Query: 1 MKSLSYKRIYKSQEYLATL-GTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQY 59 MK + K + L + G + ++ F Y + D +FA+ D + YL + Sbjct: 1 MKYIDAKT-QHIRNLLYPIIGETKAKTYFSYYGIMKDKAMFALYKDDKFYLHIPNHCLEE 59 Query: 60 CVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER- 118 + L + G ++ ++Y + L + ++ S+ L K + ++ Sbjct: 60 NIAKNLSLLLDSQTGINL-KSFYLIPPDLLNDLQQVSHWVVESVKDILHTKQNQYMEKKK 118 Query: 119 -LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIG 177 ++ LPNM+ LE L ++G+ + L G ++ L + + +LF L GAI Sbjct: 119 CIRTLPNMTIQLERTLKKLGVYSIDDLVDRGEIDIFVNLLKIGVDADQALLFRLHGAINR 178 Query: 178 IHEAALPVARRQELAEWADS 197 + + +Q L AD+ Sbjct: 179 QYIYTISDKTKQNLLNDADN 198 >UniRef50_B9CWT0 Possible DNA transformation protein n=2 Tax=Actinobacillus minor RepID=B9CWT0_9PAST Length = 214 Score = 162 bits (410), Expect = 7e-39, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 82/195 (42%), Gaps = 3/195 (1%) Query: 6 YKRIYKSQEYLATL-GTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHP 64 ++ E + G I ++ F Y + D +FA+ D +YLR ++++ Sbjct: 5 HQIRQTVNEIFNPIIGDIRIKTYFSYYGIFSDGFMFALYKDDHIYLRTNQETSAAIQSIE 64 Query: 65 PVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTR--NTRERLKDL 122 V++ T N+Y + S + + LD +E++ + + +++ L Sbjct: 65 GVFVLDDLKAGIHTKNFYALPISYILSSTQFPAWVTSILDELRQERTRKEEKLKTQIRSL 124 Query: 123 PNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAA 182 N++ +E IL + I +V + G ++ + +Q ++ +L+ L GA+ + Sbjct: 125 TNLNMKIERILKRINIHNVDEFKQKGYLATFVDIIKQGDEGSDLLLYKLHGALEQKSVYS 184 Query: 183 LPVARRQELAEWADS 197 L + L + A+ Sbjct: 185 LTPEEKISLLQEANQ 199 >UniRef50_P43779 DNA transformation protein tfoX n=17 Tax=Haemophilus influenzae RepID=TFOX_HAEIN Length = 217 Score = 159 bits (403), Expect = 4e-38, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 5/203 (2%) Query: 4 LSYKRIYKSQEYLATL-GTIEYRSLFGSYSLTV-DDTVFAMVSDGELYLRACEQSAQYCV 61 + + I L L G + +++LF Y L ++T+FA+ + +LYLR A Sbjct: 3 IKDEHIDSVCSLLDQLVGNVSFKNLFTGYGLFHKEETMFAIWQNKKLYLRGEGVLAIQLT 62 Query: 62 KHPPVWLTYKKCGRSVTLN-YYRVDESLWRNQLKLVRLSKYSLDAALKEK--STRNTRER 118 K T + + L+ YY + + + R+ +L S+ L++K T R Sbjct: 63 KLGCEPFTTNELNKRFVLSQYYALSDQILRSNRLCRKLIILSIKQILEQKLECTLRKLNR 122 Query: 119 LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGI 178 LKDLPN++ E L +VGI +V LR +GA+ + L++ S T + L A+ Sbjct: 123 LKDLPNLTIKHERALIKVGITNVAMLREIGAENALVELKKSGSGATLDFYWKLVCALQNK 182 Query: 179 HEAALPVARRQELAEWADSLTPK 201 + L A ++ L + + + K Sbjct: 183 NSQMLSQAEKERLLKKLNEVWRK 205 >UniRef50_Q21SS3 Regulator of competence-specific genes n=4 Tax=Betaproteobacteria RepID=Q21SS3_RHOFD Length = 217 Score = 156 bits (395), Expect = 5e-37, Method: Composition-based stats. Identities = 42/220 (19%), Positives = 80/220 (36%), Gaps = 22/220 (10%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 S + I + LA G + R +FG Y L D +V D +L+L+ Q + Sbjct: 2 STTQSIIDFLLDQLADCGAVTARKMFGEYCLYYDGRPVGLVCDNQLFLKNTVQGRGLLEE 61 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSK-----YSLDAALKEKSTRNTRE 117 Y + + L W ++ L +L + SL A R Sbjct: 62 V-VEAAPYPRARPHLLL-----TADQWDDRHNLCQLVRVTADALSLVEAPGPVKVRTAPA 115 Query: 118 R-----------LKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEK 166 + + LPN+ +L GI+ + L+ LG+ + + ++++ + + Sbjct: 116 KPGGVAQGAAASVATLPNLGPKSRQMLEAAGIRTLAQLKKLGSVVAYAKVKRCSGSASLN 175 Query: 167 ILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPA 206 +L+ LEGA+ G+ + R L + + Sbjct: 176 LLWALEGALSGLPWQVVAREHRTSLLLALEQHEQGADRRP 215 >UniRef50_UPI0001BCFC5E putative DNA transformation protein n=2 Tax=Mannheimia haemolytica serotype A2 RepID=UPI0001BCFC5E Length = 221 Score = 155 bits (393), Expect = 6e-37, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 92/198 (46%), Gaps = 7/198 (3%) Query: 7 KRIYKSQEYLATL-----GTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCV 61 + I + +E + + GTI ++ F Y++ D + A+ +G YLR ++ +Y Sbjct: 10 QTINEIKEEIYPIFEPIIGTIRLKTYFSYYAVFKDGLMIALYQNGATYLRIAKKDIEYIR 69 Query: 62 KHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEK--STRNTRERL 119 ++P + + + ++ + + L + K L ++ EK ++ ++ Sbjct: 70 QYPETCILCDEKIGIQSRKFHYIPQVLIDDTPKFSSLLFGIIEELRTEKYKISQKRATQI 129 Query: 120 KDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIH 179 ++LPNM+ LE +L ++GI + G +++L Q VTE +LF L GA+ + Sbjct: 130 RNLPNMNLKLERMLKKIGIHSIHDFTQEGYMSTFIKLILQGFDVTEDLLFKLNGALNHQY 189 Query: 180 EAALPVARRQELAEWADS 197 +++EL + A+ Sbjct: 190 IYTFTDQQKRELMQEANQ 207 >UniRef50_C6ALQ9 DNA transformation protein TfoX (Competence activator) (Protein sxy) n=1 Tax=Aggregatibacter aphrophilus NJ8700 RepID=C6ALQ9_AGGAN Length = 210 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 4/173 (2%) Query: 13 QEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLT--Y 70 E+ + ++ ++LF + + D +FA+ +G +Y++A Y K V + Sbjct: 10 LEFSELIEDVKVKNLFNGHGIFHQDIMFALHQNGSIYIKAEGDLVSYLEKLGAVAYAINH 69 Query: 71 KKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE--RLKDLPNMSFH 128 + NYY++ S+ RN+ K + ++ A +K + + R+K+L N S Sbjct: 70 DSMKKLALYNYYQLPNSIRRNKEKFKEILILAIKQAKAKKLSDELSKKERIKELANFSIK 129 Query: 129 LEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEA 181 E +L +V I V R LGA ++RL++ +L+ A+ H + Sbjct: 130 HERLLAKVNIYTVTEYRKLGAYHSFIRLKKLGIPANIDLLWTFIAALKNKHVS 182 >UniRef50_Q2W7N9 Regulator of competence-specific gene n=2 Tax=Rhodospirillaceae RepID=Q2W7N9_MAGSA Length = 177 Score = 136 bits (343), Expect = 4e-31, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 53/119 (44%), Gaps = 1/119 (0%) Query: 2 KSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCV 61 +S + + L+ LG++ R++FG + + +D +F +++ L+L+A +++ Sbjct: 54 TVVSRQFADHVCDMLSPLGSVTARAMFGGFGVYLDGLMFGLIAWDTLFLKADDRNRPMFE 113 Query: 62 KHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLK 120 + + + + Y+ V + +L + + DAAL+ + + + L Sbjct: 114 EAGAGPFK-PWEDKPMAMPYWEVPADIMEEGAELCAWGRAAFDAALRTRKPKKVAKTLS 171 >UniRef50_B5EW93 TfoX C-terminal domain family protein n=1 Tax=Vibrio fischeri MJ11 RepID=B5EW93_VIBFM Length = 261 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 76/210 (36%), Gaps = 34/210 (16%) Query: 21 TIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWL---TYKKCGRSV 77 I YR LFG + T DT+F V +G LY R E + K G+ Sbjct: 34 DIGYRHLFGGHLYTYKDTMFVKVYNGSLYFRIKEGLTNFWDNKGSSEFPLVNISKSGKRT 93 Query: 78 TLN------------------------------YYRVDESLWRNQLKLVRLSKYSLDAAL 107 +L +Y + S+ + L K S + Sbjct: 94 SLPTEKVTSLAIAIENPVSNPSKRPSYFSQNNFWYSIPSSITEKNE-MAELLKGSYLLCV 152 Query: 108 KEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKI 167 KE + L+ LPN++ ++ +L + IK++ L+ LGA + ++ + Sbjct: 153 KEDKEKARSNDLRKLPNITAAIKRMLVKADIKNITQLKTLGAVKSYRLIKIHYPKASYAN 212 Query: 168 LFMLEGAIIGIHEAALPVARRQELAEWADS 197 L+ L+ A+ H + L + R L + Sbjct: 213 LYALDAALQKKHVSLLSDSERNNLVRRYEG 242 >UniRef50_B0CFX0 TfoX N-terminal domain protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CFX0_ACAM1 Length = 120 Score = 125 bits (315), Expect = 7e-28, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 54/108 (50%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 S + E L L + R +FG + L V+ +FA+++D +YL+A ++ + V+ Sbjct: 3 TSSTFVSSVLERLNHLAPVSARPMFGGHGLYVEGVMFALIADERIYLKADGENQPFFVEA 62 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKS 111 Y + + + ++YY + ++ N +L +++AAL+ ++ Sbjct: 63 GSRPFIYDRKEKPMVMSYYLLPIDIYENLDELKVWLDSAVEAALRNQA 110 >UniRef50_A6X160 TfoX domain protein n=2 Tax=Ochrobactrum RepID=A6X160_OCHA4 Length = 118 Score = 125 bits (315), Expect = 8e-28, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 2/115 (1%) Query: 10 YKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLT 69 ++ L G I R +FG + +FA+V EL +A E + + T Sbjct: 4 EALRDLLQDFGPISIRRMFGGKGIYHQGLIFALVVRDELLFKADEITIPDFIDAGATQWT 63 Query: 70 Y--KKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDL 122 Y +K G + + Y+ V + + + ++ + DAAL+ + T+ ++ Sbjct: 64 YEGRKGGDPIAMPYWSVPSEAFDDPEVMTHWARLAYDAALRSEKTKPKKKSAAKR 118 >UniRef50_C6X8H0 TfoX domain protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X8H0_METSD Length = 123 Score = 124 bits (311), Expect = 2e-27, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 48/113 (42%) Query: 6 YKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPP 65 + + A LG I R +FG ++L F +V D LYL+A ++A Sbjct: 2 SEFTDYLPDIFALLGPISIRRMFGGHALYHQGLTFGLVFDETLYLKADAENAGDFQALAL 61 Query: 66 VWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 Y+K GR + L YY+ + + ++ + + AAL+ K + R Sbjct: 62 PRFGYEKQGRWIDLPYYQAPDFILEDRDLAASWASKAYAAALRTKPLKPRRNS 114 >UniRef50_UPI0000384580 COG3070: Regulator of competence-specific genes n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000384580 Length = 112 Score = 122 bits (307), Expect = 6e-27, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 49/105 (46%), Gaps = 1/105 (0%) Query: 15 YLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCG 74 L+ LG + ++FG + + +D +FA+++ LYL+A ++++ + Sbjct: 1 MLSPLGEVTASAMFGGFGIYLDGLMFALIAWDTLYLKADDRNSAMFEEAGSAPFK-PWED 59 Query: 75 RSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERL 119 + + + Y+ V + +L S+ + DAAL+ + + + Sbjct: 60 KPMVMPYWEVPADVMEEAAQLCAWSRAAFDAALRTRKPKKPKRPS 104 >UniRef50_B4W9C4 TfoX N-terminal domain superfamily n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W9C4_9CAUL Length = 118 Score = 122 bits (306), Expect = 8e-27, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 56/110 (50%), Gaps = 1/110 (0%) Query: 8 RIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVW 67 +E+ A LG +E + +FG + +FA++ DG ++L+ E + V+ Sbjct: 7 FGEWVREHFAGLGLLEIKRMFGGAGVYASGVMFALLDDGVVWLKGDEALGEAFVEAGCRQ 66 Query: 68 LTYK-KCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTR 116 Y K GR++++ Y+ + E+ + + V ++ +L+ A+++ S + + Sbjct: 67 FRYPTKDGRTMSMGYWTLPETALDDPDEAVDWARRALEVAVRKASGKKPK 116 >UniRef50_D0XP84 TfoX domain protein n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XP84_9CAUL Length = 120 Score = 122 bits (306), Expect = 9e-27, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 61/114 (53%), Gaps = 1/114 (0%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHP 64 + +E A LG +E + +FG ++ + +FA++ DG ++L+A E +A V+ Sbjct: 4 DPEFGDWVREQFAGLGPVEIKRMFGGAAVYANGLIFALLDDGVVWLKADETNAPLLVEAG 63 Query: 65 PVWLTYK-KCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE 117 T+ K G+++++ Y+ + E + + V ++ S++ AL++ + + R+ Sbjct: 64 ARQFTFPTKDGQTMSMAYWSMPEPAMDDPDESVAWARQSIEVALRKAAAKRPRK 117 >UniRef50_UPI00017468B2 TfoX N-terminal domain protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017468B2 Length = 136 Score = 122 bits (306), Expect = 9e-27, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 2/113 (1%) Query: 8 RIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVW 67 + + L LG + R +FG Y + + +F +VS YLR +++ + Sbjct: 4 FVDSLLDLLTPLGDVTARKMFGGYGIYKEALMFGLVSQNRFYLRTDDETKDRFIDQGCEP 63 Query: 68 LTY--KKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 + K G V YY E + N ++ + + AL+ +T+ R++ Sbjct: 64 FVFCLDKAGNPVVSKYYEPPEMAFANAQRMRPWATMGWECALRSVTTKAARKK 116 >UniRef50_B8J923 TfoX domain protein n=6 Tax=Proteobacteria RepID=B8J923_ANAD2 Length = 206 Score = 120 bits (300), Expect = 4e-26, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 46/101 (45%), Gaps = 3/101 (2%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 +S + + + ++ LG ++ R +FG L D +F ++ EL+L+ ++ + ++ Sbjct: 3 ISPSFVDHAVDLVSALGPVQARRMFGGVGLYCDGLMFGLLDGDELFLKTDGETRPWFLEA 62 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLD 104 Y + +YYR + + ++ ++ +LD Sbjct: 63 GCRMWIYPGMYET---SYYRPPDEAHEDAEAMLPWARLALD 100 >UniRef50_B4D0P5 TfoX domain protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0P5_9BACT Length = 119 Score = 120 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 1/111 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M S + + E L LGTI +S+FG + D+ FA+V+D Y++ + S Sbjct: 1 MPQKS-EFVEYLVEMLQPLGTIRVKSMFGGWGFYADERFFAIVADDGFYVKVDDVSRGEF 59 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKS 111 Y+ TL+YY + ++ L ++ + AA + ++ Sbjct: 60 EAFDLKPFRYEVRDTKATLDYYEPPAAAMDDREMLCEWARKGIAAAERAQA 110 >UniRef50_A5EIP8 Putative uncharacterized protein n=2 Tax=Bradyrhizobium RepID=A5EIP8_BRASB Length = 182 Score = 119 bits (299), Expect = 5e-26, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 1/114 (0%) Query: 10 YKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLT 69 E A G + R +F + ++ D FA+ LYLRA E S + Sbjct: 4 DYLVELFAGFGPVTIRRMFSGFGISADGINFALALRSGLYLRADEASFAKFEAAGSQPFS 63 Query: 70 YKKCGRSVTL-NYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDL 122 Y+ R++T+ +Y++V L+ + + ++ + AA + ++ R Sbjct: 64 YETRARTMTVRSYWQVPAHLFDDADEFTLWAREAFVAAQTAALRKRSKTRAASR 117 >UniRef50_A8IAK2 TfoX protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAK2_AZOC5 Length = 143 Score = 119 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 47/119 (39%) Query: 10 YKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLT 69 + LA LG +E + +FG + + D +FA+ S G+L+++A AQ L Sbjct: 4 DDLADLLAPLGPVEIKRMFGGHGIFYDGRMFALESGGDLFIKADGDFAQELAALGCAPLG 63 Query: 70 YKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFH 128 Y R VTL Y+ + E+ + L + + A + ++ Sbjct: 64 YTARNRQVTLPYWTLPEAALDDPEAREVLFRRAQGVARAGAVKKARGKKAASKAPAGPA 122 >UniRef50_A1VWB7 TfoX, N-terminal domain protein n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VWB7_POLNA Length = 131 Score = 118 bits (296), Expect = 1e-25, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 4/114 (3%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSD----GELYLRACEQS 56 M + + E LA G R +FG Y ++ D +++D L+L+A + Sbjct: 1 MTARPDEFAQYCCELLAAAGPCTARHMFGGYGISTDGLTLGLLADLGQGATLWLKAGPDT 60 Query: 57 AQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEK 110 TY+ G++ +L YY + + + ++ +L+ AL + Sbjct: 61 RAVFEAAGCQRFTYQAKGKTRSLGYYSAPDEAMESARDMAPWARLALEVALAAR 114 >UniRef50_Q1H056 TfoX-like protein n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H056_METFK Length = 108 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 43/92 (46%) Query: 7 KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV 66 + I +E L G I + +FG Y + D +FA+++D LYL+A +S + Sbjct: 3 ELITHLEELLQGFGPIRAKRMFGGYGIYHDGLMFALIADDTLYLKADAESRKEFDSLGLP 62 Query: 67 WLTYKKCGRSVTLNYYRVDESLWRNQLKLVRL 98 Y K G+ VT++Y++ + + V Sbjct: 63 AFRYAKQGKEVTMSYFQAPADMLEAPEQAVYW 94 >UniRef50_A8ZSR2 TfoX domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZSR2_DESOH Length = 110 Score = 117 bits (294), Expect = 2e-25, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 47/109 (43%), Gaps = 1/109 (0%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 +S + + + LA G + R +FG L D +F +++ +YL+ + + + V+ Sbjct: 3 VSNEFLIFVLDQLAEWGGVTARKMFGGAGLYRDGRMFGLIAGDVVYLKVDDSNREAFVRA 62 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKST 112 + V+L+YY V + +L+ + SL ++K Sbjct: 63 GSSAFK-PFADKPVSLSYYEVPPDVLEVPEELIDWAARSLAVQSRKKKK 110 >UniRef50_C5CTZ8 TfoX domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CTZ8_VARPS Length = 128 Score = 116 bits (292), Expect = 3e-25, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 51/103 (49%) Query: 6 YKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPP 65 + + E LG IE R +FG + + + + A+V+ LYL++ SA++ K Sbjct: 2 SEFVQSLHEVFERLGRIETRRMFGGHGVWHEGRMIALVAKDTLYLKSDAGSAEHFDKLDL 61 Query: 66 VWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALK 108 TY + G+++ ++Y L+ ++ + + + +AAL+ Sbjct: 62 PPFTYVREGKAMPMSYRLAPADLFEDREEAALWGRRAYEAALR 104 >UniRef50_A5EK31 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EK31_BRASB Length = 126 Score = 115 bits (289), Expect = 8e-25, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 1/97 (1%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC-VK 62 + + +E A LG+I R +FG + D + MV+D LYLR + + Sbjct: 3 ATPDYVEFLREQFAPLGSITLRRMFGKTGIFHDGAMLGMVADNTLYLRVDDDNRAMFAEA 62 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLS 99 L Y+K G ++ L ++R+ + L+ + + S Sbjct: 63 QSHPPLNYRKKGVAIDLAFWRIPDRLFDEPDEFISWS 99 >UniRef50_A7H6Y4 TfoX domain protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7H6Y4_ANADF Length = 140 Score = 115 bits (288), Expect = 9e-25, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 1/98 (1%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHP 64 S + + LA G +E R +FG + L +F ++ D EL+L+ + V Sbjct: 4 SEAFVEHVLDLLALAGPVEARRMFGGHGLYAGGAMFGLLDDDELFLKTDAVTRARFVDAG 63 Query: 65 PVWLTYKKC-GRSVTLNYYRVDESLWRNQLKLVRLSKY 101 Y + G + +Y+R + ++ ++ Sbjct: 64 CRPWFYARRDGTTERTSYFRPPDDAHEEPEAMLPWARL 101 >UniRef50_UPI0001A44F59 hypothetical protein PcarcW_04384 n=1 Tax=Pectobacterium carotovorum subsp. carotovorum WPP14 RepID=UPI0001A44F59 Length = 127 Score = 115 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 52/120 (43%), Gaps = 6/120 (5%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSD-GELYLRACEQSAQYCVK 62 +S + + L+ LG R +FG ++ D + ++++ GE++++ +++ K Sbjct: 3 ISGELTAFIMDQLSPLGRFVPRKMFGCLAIFHDGLMVLLINNQGEVFVKTDDRNRSLFDK 62 Query: 63 HPPVWLTYKKCG-----RSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE 117 TY + G +++ L++ ++ + Q VR ++AA + + Sbjct: 63 VGCPPFTYTRRGEDGKLKTICLSFSQLPDDAMEEQETFVRWVASGIEAARRTARLKGKST 122 >UniRef50_A7MK87 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MK87_ENTS8 Length = 130 Score = 115 bits (287), Expect = 1e-24, Method: Composition-based stats. Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 6/113 (5%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDG-ELYLRACEQSAQYCV 61 S+S + + + LA LG +E R +FG +L +FA++ +LY++A +Q+ + + Sbjct: 2 SVSREYVTFVLDQLAPLGVVETRRMFGCVALFQAGRMFALLDGDAQLYIKADDQNRERFI 61 Query: 62 KHPPVWLTYKKCGR-----SVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKE 109 TY R VTL YYR+ E L + +L+R + L AA++ Sbjct: 62 AEGFPPFTYVTTRRSGGQQEVTLGYYRIAEELVEDNQELLRWAHEGLAAAMRT 114 >UniRef50_Q476T5 TfoX, N-terminal n=5 Tax=cellular organisms RepID=Q476T5_RALEJ Length = 120 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 5/114 (4%) Query: 5 SYKRIYKSQEYLATL----GTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 I E + L G I R +FG + L D +FA+VSDG+ YL+A +++ Sbjct: 6 PDPFIEHLLELMGPLAARIGAISARRMFGGHGLFYDGLMFALVSDGQCYLKADDKTLPRF 65 Query: 61 VKHPPVWLTY-KKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTR 113 Y G +Y + + + ++ +++AAL+ + + Sbjct: 66 EAESSHTFRYQSSRGEVALRHYLSLPAECLESPAAMTPWAQMAVEAALRLANQK 119 >UniRef50_B3QH73 TfoX domain protein n=3 Tax=Rhodopseudomonas palustris RepID=B3QH73_RHOPT Length = 168 Score = 114 bits (285), Expect = 2e-24, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 1/90 (1%) Query: 10 YKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLT 69 + A G + R +F + ++ D FA+V +YLR A Sbjct: 4 EFLADLFAPFGPVTIRRMFSGFGISADGVTFALVIRDAIYLRTDADGAARFEAEGSRPFR 63 Query: 70 YKKCGRSVTL-NYYRVDESLWRNQLKLVRL 98 Y ++VT+ +Y+ + E L + +L Sbjct: 64 YDTRTKTVTVGSYWLLPERLLDDPDELAEW 93 >UniRef50_Q2IVS1 TfoX-like n=1 Tax=Rhodopseudomonas palustris HaA2 RepID=Q2IVS1_RHOP2 Length = 133 Score = 113 bits (283), Expect = 3e-24, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 1/90 (1%) Query: 10 YKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLT 69 + + G + R +F + ++ D FA+V G +YLRA ++ Sbjct: 4 EFLIDLFSPFGPVTIRRMFSGFGISADGVNFALVIQGAIYLRADAETIPRFQAEGTAPFH 63 Query: 70 YKKCGRSVTL-NYYRVDESLWRNQLKLVRL 98 Y R+VT+ +Y+R+ + L + +L + Sbjct: 64 YTTRLRTVTVGSYWRLPDRLLDDPDELAQW 93 >UniRef50_B2U777 TfoX domain protein n=6 Tax=Ralstonia RepID=B2U777_RALPJ Length = 155 Score = 113 bits (282), Expect = 5e-24, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 5/114 (4%) Query: 1 MKSLSYKRIYKSQEYLATL----GTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQS 56 M + I + L L G I R +F +L DD VFA+V G YLR + + Sbjct: 1 MAAAPDPLIAWLLDELRPLAAQIGEIRARRMFSGAALYYDDIVFALVLRGTSYLRVDDLT 60 Query: 57 AQYCVKHPPVWLTYKKCGRSVTL-NYYRVDESLWRNQLKLVRLSKYSLDAALKE 109 + + +Y++ GR++++ Y L ++ +++AAL++ Sbjct: 61 RERFLAEKCTPFSYERNGRTISMTGYLSTPAEALDGGQPLRDWARLAIEAALRD 114 >UniRef50_Q12FR8 TfoX-like n=2 Tax=Comamonadaceae RepID=Q12FR8_POLSJ Length = 171 Score = 112 bits (281), Expect = 6e-24, Method: Composition-based stats. Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 8/128 (6%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSD----GELYLRACEQS 56 M + E L+ +G R +FG Y ++ A+V+D +L+L+A + Sbjct: 1 MATPKDDFAIYCCELLSGVGPCVARRMFGGYGISTSGLTLALVADLGGGEKLWLKADADT 60 Query: 57 AQYCVKHPPVWLTYK--KCGRSV--TLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKST 112 TY + G + +LNYY E + +++ ++ SLD ALK +S Sbjct: 61 RGRFEAAGCERFTYDITRNGERLAHSLNYYSAPEEAMESAQLMLQWARVSLDCALKARSA 120 Query: 113 RNTRERLK 120 ++ R R+ Sbjct: 121 KSPRARVA 128 >UniRef50_B8GZ57 DNA transformation protein tfoX n=3 Tax=Caulobacter RepID=B8GZ57_CAUCN Length = 127 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 2/115 (1%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 ++S E LA LG + R +FG + + FA+++D LYL+ E Sbjct: 10 AVSNDYRDFVLELLAPLGQVSARRMFGGVGIYANGLFFALIADDVLYLKGDEDLKVAFEA 69 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE 117 + G+ T+ Y+ +Q L+ ++ SL A +++ Sbjct: 70 VGSQAFAPFEDGK--TMAYWTAPAEALDDQDLLLDWARKSLAVAARKQKPSPKGR 122 >UniRef50_B3T1X2 Putative TfoX N-terminal domain protein n=1 Tax=uncultured marine microorganism HF4000_097M14 RepID=B3T1X2_9ZZZZ Length = 136 Score = 110 bits (275), Expect = 3e-23, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 52/109 (47%) Query: 7 KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV 66 + + + L +G + Y+ LFG Y++ D FA+V DG +Y + + + + Sbjct: 26 EFLNYMLDLLEPMGELSYKPLFGGYAICKHDAAFALVFDGAVYFKTDTTNRKDYESYNSN 85 Query: 67 WLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNT 115 LTY+K G++++L+ V + +Q +L++ + + A K Sbjct: 86 PLTYQKQGKTISLSNLEVPAEVIEDQDRLLQWANTAYKIAKNVKKKTKQ 134 >UniRef50_B1Y642 TfoX domain protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y642_LEPCP Length = 134 Score = 110 bits (274), Expect = 4e-23, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 1/96 (1%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 ++ + + E LA LG R +FG VDD A+++DG LYL+ QS Sbjct: 1 MAEELVNHVLELLAPLGRARSRRMFGGQGFYVDDLFIALIADGRLYLKVDAQSRAVFESA 60 Query: 64 PPVWLTYKKC-GRSVTLNYYRVDESLWRNQLKLVRL 98 Y++ G ++Y+ + + + Sbjct: 61 GCEPFAYQRAGGERAVMSYFSAPDDAMESPALMQPW 96 >UniRef50_Q0BYF8 TfoX domain protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BYF8_HYPNA Length = 125 Score = 110 bits (274), Expect = 4e-23, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 35/100 (35%), Gaps = 2/100 (2%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M E L+ G I R +FG + D +FA++SD ++Y++ Sbjct: 1 MAKAPDPLHEFVLELLSGAGAINIRRMFGGAGVYQDGVMFALLSDDQIYVKVDPALRADL 60 Query: 61 VKHPPVWLTYKKC--GRSVTLNYYRVDESLWRNQLKLVRL 98 + Y + + + L Y + S + + Sbjct: 61 LAEGGAPFLYLRSSDAKPIDLGYVSLPSSAMDDPDEATVW 100 >UniRef50_UPI0001B4164C TfoX domain-containing protein n=1 Tax=Burkholderia thailandensis E264 RepID=UPI0001B4164C Length = 167 Score = 109 bits (273), Expect = 6e-23, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 45/122 (36%), Gaps = 1/122 (0%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 R + E L LG I F SL +D +F V G L+LR + + + Sbjct: 4 KAEKLRADELAEQLDALGPIGVARFFSGASLRLDGVLFGFVHAGSLFLRVDDDTRAAFER 63 Query: 63 HPPVWLTYKKCGRSVTL-NYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKD 121 +Y R+V + YY + + L + + AA++ + + ++ Sbjct: 64 AGMRPFSYPGRTRTVVVGGYYETPADVLEDVGMLRDWCRDAYRAAVRAGADQVRVVPPRE 123 Query: 122 LP 123 + Sbjct: 124 IS 125 >UniRef50_Q28PB9 TfoX-like protein n=8 Tax=Rhodobacterales RepID=Q28PB9_JANSC Length = 109 Score = 109 bits (272), Expect = 7e-23, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMV-SDGELYLRACEQSAQYCV 61 S+S + I + E +LG + R + G + T+FA++ SDG+LYL+ Sbjct: 2 SVSDEEIAHALELFDSLGDLTTRKMMGGLCIYHRGTIFALLMSDGQLYLKGAGDFHDVLK 61 Query: 62 KHPPVWLTYKKCG---RSVTLNYYRVDESLWRNQLKLVRLSKYSLD 104 TY++ G + + Y+ + ++ + + V ++ +L+ Sbjct: 62 DAGCTRWTYQREGAKRKPTAMPYWTMPDAALDDPEEAVAWARRALE 107 >UniRef50_Q46MJ2 TfoX, N-terminal n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MJ2_RALEJ Length = 138 Score = 108 bits (271), Expect = 1e-22, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 1/108 (0%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 + L+ + + L+ +I R LFG+ +L ++ VFAMV G LY + E+S Sbjct: 4 LTKLTKELAAHFADQLSGWASITTRPLFGAVALYREEDVFAMVWQGSLYFKVSEESRGDF 63 Query: 61 VKHPPVWLTYKKCGRSVTL-NYYRVDESLWRNQLKLVRLSKYSLDAAL 107 L Y G+ L +Y+ V + ++ +L+ ++ + +AA Sbjct: 64 ETAGSHALGYVSEGQEHALKSYWEVPVDVIEDRKQLIVWAQRAWEAAK 111 >UniRef50_Q1YNM3 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YNM3_MOBAS Length = 129 Score = 106 bits (266), Expect = 3e-22, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 1/110 (0%) Query: 10 YKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLT 69 +E A++ R +FG + D + A+V DGELYL++ ++ Sbjct: 4 DFLRELFASVPGFRIRRMFGEQGIYAGDRILALVVDGELYLKSDTETDAIYEAEGLRNWH 63 Query: 70 YKKCGR-SVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 Y + GR V + YYR+ ++ + + + R + A+ + T+ + Sbjct: 64 YARTGRSPVRMPYYRMPDAAFDDPDEAERWIALADGASRRAARTKGAAKP 113 >UniRef50_Q399G3 TfoX-like protein n=47 Tax=Burkholderia RepID=Q399G3_BURS3 Length = 349 Score = 106 bits (265), Expect = 5e-22, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 2/125 (1%) Query: 1 MKSLSYKRI-YKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQY 59 M S K + LA LG + F ++ +D +F +S G L+LR + + Sbjct: 1 MSWQSEKAHGEEIAYQLAPLGNVTVVRFFSGAAMRLDGVMFGFMSRGSLFLRVDDVNRPA 60 Query: 60 CVKHPPVWLTYKKCGRSVTLN-YYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 V +Y++ R+V+L+ YY + + L + + AAL + Sbjct: 61 FVAAGMGPFSYERPTRTVSLDGYYEAPADVLEDAGALFDWCRSAYRAALLAGPPKRKARA 120 Query: 119 LKDLP 123 ++ Sbjct: 121 VRKAK 125 >UniRef50_B0UFD5 TfoX domain protein n=16 Tax=Rhizobiales RepID=B0UFD5_METS4 Length = 111 Score = 105 bits (263), Expect = 7e-22, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 44/101 (43%), Gaps = 1/101 (0%) Query: 12 SQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYK 71 +E + LG + R +FG + + A+ G+L L+A SA +Y Sbjct: 6 IEEIFSGLGPVTVRRMFGGKGIYHGGRIVAVEVRGDLLLKADAASAPLFAAAGATQWSYA 65 Query: 72 -KCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKS 111 + G+++ + Y+ + + + + R + + +AAL+ Sbjct: 66 GRKGQAIRMPYWSIPADAYDDPDAMARWVRLAHEAALRADG 106 >UniRef50_B5ZNQ0 TfoX domain protein n=4 Tax=Rhizobium RepID=B5ZNQ0_RHILW Length = 126 Score = 105 bits (263), Expect = 8e-22, Method: Composition-based stats. Identities = 30/121 (24%), Positives = 45/121 (37%), Gaps = 1/121 (0%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 + + +A G I+ R FG +L + F V G LYLR Sbjct: 5 ATRSLALEFASQIAPPGAIDIRRFFGGSALVRNGAQFGFVMKGTLYLRVDATMRAEFEAD 64 Query: 64 PPVWLTYKKCGRSVTL-NYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDL 122 +Y+ GR VT+ YY V + + L R S+ + DA + R+ L Sbjct: 65 GSEPFSYRAAGREVTVRRYYAVPAHVIDDPSLLRRCSERAFDATTRPARKRSKATLAVSL 124 Query: 123 P 123 P Sbjct: 125 P 125 >UniRef50_Q6D6U0 Putative uncharacterized protein n=1 Tax=Pectobacterium atrosepticum RepID=Q6D6U0_ERWCT Length = 113 Score = 103 bits (256), Expect = 5e-21, Method: Composition-based stats. Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 5/115 (4%) Query: 1 MKSLSYKRIYKSQEY---LATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSA 57 M L+ + ++ Y L+ I R LFG+ +L D VFAMV G LY + S Sbjct: 1 MTKLTGQGRALAEHYAGELSGWAPITTRPLFGAVALYRDGLVFAMVWKGSLYFKVDNASQ 60 Query: 58 QYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKST 112 V L Y +Y+ V + + +++ ++ + AALK Sbjct: 61 ADYVAAGSHALGY--GNDHALKSYWEVPVDVIEDSERVLEWAQRAWSAALKAAKD 113 >UniRef50_B2SQ79 TfoX C-terminal domain family n=13 Tax=Xanthomonadaceae RepID=B2SQ79_XANOP Length = 127 Score = 101 bits (252), Expect = 1e-20, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 2/86 (2%) Query: 122 LPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEA 181 + N+ A L +VG++ + L+ +GA ++++R+ + +L+ LEGA+ H Sbjct: 1 MRNIGPKSAAWLRQVGLRTRQDLQEVGAVGAFVKVRRAGFKPSLNLLYSLEGALADCHWQ 60 Query: 182 ALPVARRQELAEWADSLTPKQEFPAE 207 +P ARR L ++ + P Sbjct: 61 DVPEARRHALLAEYEAAS--ALLPVR 84 >UniRef50_A7IPN3 TfoX domain protein n=1 Tax=Xanthobacter autotrophicus Py2 RepID=A7IPN3_XANP2 Length = 124 Score = 101 bits (252), Expect = 2e-20, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 1/88 (1%) Query: 10 YKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLT 69 + + G + R +FG L D +FA+ G LYL+A A V + Sbjct: 4 DTIADLFSAFGPVRTRRMFGGRGLYADGLMFAIEVGGTLYLKADADHAALLESRGSVPFS 63 Query: 70 YKKCGRSVTL-NYYRVDESLWRNQLKLV 96 Y G T+ ++ V E+ + L Sbjct: 64 YLAKGAVRTMTGFWSVPEAALDDGDDLA 91 >UniRef50_C6P678 TfoX domain protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P678_9PROT Length = 101 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 2/99 (2%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 + E+LA LG + + + G + L + F + DG LY R + Sbjct: 2 STDSFRDFVLEHLAGLGDLRCKRMCGGHGLYAGEKFFGIPFDGRLYFRTHPDTLPDFPAR 61 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYS 102 + K + + NY+ V + + ++ + Sbjct: 62 NAPVFSPSK--KQILQNYHEVPADILEDSEFFPLWARKA 98 >UniRef50_B2JSG2 TfoX, N-terminal n=2 Tax=Burkholderia RepID=B2JSG2_BURP8 Length = 118 Score = 100 bits (249), Expect = 4e-20, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 1/112 (0%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 ++ E LA + I RSLFG+ +L ++ VF MV G+LY + +++ Sbjct: 6 KINEDLAQYIIEQLALIDPISTRSLFGACALCRNEHVFGMVWKGDLYFKVDDENQNDYEI 65 Query: 63 HPPVWLTYKKCGRSVTLNYYR-VDESLWRNQLKLVRLSKYSLDAALKEKSTR 113 L Y G L +R V + N+ +L ++ + AA+K Sbjct: 66 ANSHTLGYVSKGEERALKSFRAVPAEVVENREELRIWAEKAYRAAMKAAKPS 117 >UniRef50_A5W959 TfoX, C-terminal domain protein n=15 Tax=Pseudomonas RepID=A5W959_PSEP1 Length = 92 Score = 100 bits (248), Expect = 4e-20, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 45/91 (49%) Query: 115 TRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGA 174 + L+ L N+ L GI LR LGA + ++ + ++ +L+ +EGA Sbjct: 1 MNDELQHLKNLGKTSAQWLHAAGIHSASDLRRLGAVGAYQAVKTRGFRASKVLLYAIEGA 60 Query: 175 IIGIHEAALPVARRQELAEWADSLTPKQEFP 205 ++ +H LP+ R++ L + D+ P Q+ P Sbjct: 61 LLDMHWNDLPLERKEALNQQLDAKNPTQKKP 91 >UniRef50_B2TNQ5 TfoX C-domain superfamily n=14 Tax=cellular organisms RepID=B2TNQ5_CLOBB Length = 86 Score = 99.6 bits (247), Expect = 6e-20, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 45/81 (55%) Query: 116 RERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAI 175 L LPN+ +E+ L +VGI L+ +GA+ WL++++ + L LEGAI Sbjct: 1 MGELSKLPNIGKEVESQLNKVGIFTYDELKNIGAEQAWLKIQKNDVSACIHRLLALEGAI 60 Query: 176 IGIHEAALPVARRQELAEWAD 196 GI + ALP R++ L ++ + Sbjct: 61 QGIKKTALPQERKESLKDFYN 81 >UniRef50_Q21FA5 TfoX-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21FA5_SACD2 Length = 92 Score = 99.2 bits (246), Expect = 7e-20, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 40/89 (44%) Query: 115 TRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGA 174 L DL N+ IL +G+ L +GA + R++ + V++ +L+ L+GA Sbjct: 4 PSNELLDLKNLGMASVNILHAIGVNTYEDLAQMGAVDAYCRIKSRGIHVSKVMLYALQGA 63 Query: 175 IIGIHEAALPVARRQELAEWADSLTPKQE 203 ++ +H L + +L A+ L Sbjct: 64 LMDVHWNDLSPDLKSQLVAEAEQLESTSA 92 >UniRef50_C5CMJ9 TfoX domain protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CMJ9_VARPS Length = 120 Score = 99.2 bits (246), Expect = 8e-20, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 1/94 (1%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M S + + + L+ + I FG L+ T FAMV G LY + + Sbjct: 1 MSQASPQFVDFIVDRLSGIDGITTNRFFGGTGLSAHATQFAMVMGGSLYFVVDKDTRPRY 60 Query: 61 VKHPPVWLTYKKCGRSVTLN-YYRVDESLWRNQL 93 K Y R V + Y+ V + + Sbjct: 61 EKLGSTCFAYDTKARRVQVRKYFEVPIEIIEDHE 94 >UniRef50_A9KSA6 TfoX domain protein n=14 Tax=Bacteria RepID=A9KSA6_CLOPH Length = 108 Score = 98.8 bits (245), Expect = 1e-19, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 49/85 (57%) Query: 112 TRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFML 171 T +L +LPN+ +E L EVGI++ L+ LGA+ WL++++ + L+ L Sbjct: 20 KEVTMAQLSNLPNIGKEVERQLNEVGIENYEQLKSLGAEAAWLKIQEIDESACIHRLYAL 79 Query: 172 EGAIIGIHEAALPVARRQELAEWAD 196 EGAI+GI + LP R+ EL + + Sbjct: 80 EGAILGIKKNLLPNERKSELKGFYN 104 >UniRef50_A7JTH5 Possible competence regulator n=2 Tax=Mannheimia haemolytica RepID=A7JTH5_PASHA Length = 105 Score = 98.5 bits (244), Expect = 1e-19, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDG-ELYLRACEQSAQYCVK 62 + + + L+ + + + +FG Y L D+ + A++S ++++A Q+ + Sbjct: 2 ADAEFMDFLLDQLSPISGLRSKKMFGEYCLFFDNKIVAIISKDYRIFVKANPQTLPLFLA 61 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDA 105 Y G+ ++Y+ + E +LV+ + L A Sbjct: 62 ENAEQFHYFAKGKVQKMHYWSIPELAIEEADELVKWIRLGLQA 104 >UniRef50_C4GN11 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GN11_9NEIS Length = 110 Score = 97.7 bits (242), Expect = 2e-19, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 2/103 (1%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSD-GELYLRACEQSAQYCVK 62 S + E LA LG I + +FG + A++S ELYL+ A Sbjct: 3 ASAELANHIAEQLAPLGGITRKRMFGGVGFCHYGAMVAILSRSNELYLKYPAPHADLGEP 62 Query: 63 HPPVWLTYKKCG-RSVTLNYYRVDESLWRNQLKLVRLSKYSLD 104 G R + L YYR+ E+ N +L + ++ Sbjct: 63 LISRRTDKTTGGIREIPLPYYRLPETALDNGDELRDWVRQAIA 105 >UniRef50_Q89M48 Blr4345 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89M48_BRAJA Length = 161 Score = 96.5 bits (239), Expect = 5e-19, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 1/86 (1%) Query: 10 YKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLT 69 + A G + R +F Y ++ D T FA+ L+LRA E + Sbjct: 19 EFLIDLFADFGPVTIRKMFSGYGISADGTNFALALRAGLFLRADELTIPDFETEGSKPFQ 78 Query: 70 YKKCGRSVTLN-YYRVDESLWRNQLK 94 Y ++VT+N Y+ + L+ + + Sbjct: 79 YSTRAKTVTVNSYWELPARLFDDSQE 104 >UniRef50_A5FQ89 TfoX, N-terminal domain protein n=5 Tax=Dehalococcoides RepID=A5FQ89_DEHSB Length = 111 Score = 96.1 bits (238), Expect = 6e-19, Method: Composition-based stats. Identities = 16/103 (15%), Positives = 43/103 (41%), Gaps = 9/103 (8%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSD-GELYLRACEQSAQYCVK 62 + + + + L+ L I+ R++FG Y + + +F +++D LY +A + + Sbjct: 3 ATKEFLQLVMDKLSALPEIDSRAMFGGYGIYSEGLMFGLLADENSLYFKAGDTNLADYAS 62 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDA 105 + + YY V ++ + ++ ++ S+ Sbjct: 63 YGSHQFK--------PMPYYEVPADVFEDDGLFIKWAERSVMQ 97 >UniRef50_A6LXZ3 TfoX, C-terminal domain protein n=7 Tax=cellular organisms RepID=A6LXZ3_CLOB8 Length = 86 Score = 95.4 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 25/81 (30%), Positives = 43/81 (53%) Query: 116 RERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAI 175 L LPN+ +E L +VGI L+ +GA+ WL++++ + L LEGAI Sbjct: 1 MGELSKLPNIGKEVERQLNQVGIFTYDELKAIGAEQAWLKIQEIDPSACIHRLLALEGAI 60 Query: 176 IGIHEAALPVARRQELAEWAD 196 GI + L R+++L ++ + Sbjct: 61 HGIKKTELSTKRKEDLKDFYN 81 >UniRef50_D2R0U5 Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R0U5_9PLAN Length = 310 Score = 95.4 bits (236), Expect = 1e-18, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 1/99 (1%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M R Q+ + RS+FG + +FA+++ L+L+A + Sbjct: 1 MPVSESFRRLALQQLSRYAPQVTDRSMFGGVGIYSRGKMFALLAGDSLFLKAGPEDRATF 60 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLS 99 V G VTL+YY + + L Sbjct: 61 VAAGLPPFQPFGEGG-VTLHYYEIPLDWLESGNALEPWV 98 >UniRef50_B0T8C1 TfoX domain protein n=1 Tax=Caulobacter sp. K31 RepID=B0T8C1_CAUSK Length = 86 Score = 93.5 bits (231), Expect = 4e-18, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 27/89 (30%), Gaps = 3/89 (3%) Query: 27 LFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDE 86 +FG L F ++ D LYL+ E + + Y+ Sbjct: 1 MFGGVGLYAQGLFFGLIDDDTLYLKGDESLRPDFEAAGSLQFAPFGMS---PMAYWSAPA 57 Query: 87 SLWRNQLKLVRLSKYSLDAALKEKSTRNT 115 +V ++ S+ A K+ + Sbjct: 58 EALDEPDLMVEWARRSIAVAAARKTRKAR 86 >UniRef50_B0MI89 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MI89_9FIRM Length = 95 Score = 93.1 bits (230), Expect = 5e-18, Method: Composition-based stats. Identities = 26/84 (30%), Positives = 41/84 (48%) Query: 116 RERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAI 175 LKDL N+ E L + GI L G+K WL++R + +L+ LEGA+ Sbjct: 11 MGELKDLENIGAKTEDQLNQAGIYTKEQLIKAGSKEAWLKIRAFDESACLHLLWGLEGAV 70 Query: 176 IGIHEAALPVARRQELAEWADSLT 199 GI + L R++L ++ D + Sbjct: 71 EGIKKKDLSPEVRKDLKDFFDDIN 94 >UniRef50_A1S845 Putative regulatory protein, TfoX family n=2 Tax=Shewanella RepID=A1S845_SHEAM Length = 92 Score = 92.7 bits (229), Expect = 8e-18, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Query: 116 RERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAI 175 + N+ A L E+GI + L LG+ LRL+Q V+ +L+ LEGA+ Sbjct: 1 MTPILKAANLGPKSAAWLNEIGITSLEDLHCLGSIEVMLRLKQAGIPVSLNLLYALEGAL 60 Query: 176 IGIHEAALPVARRQEL-AEWADSLTP 200 G H + + EL W +L+ Sbjct: 61 EGRHWQDVRRELKAELVLMWDAALSL 86 >UniRef50_B6QYJ7 Putative uncharacterized protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QYJ7_9RHOB Length = 113 Score = 92.7 bits (229), Expect = 8e-18, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 39/90 (43%), Gaps = 1/90 (1%) Query: 27 LFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDE 86 +FG + + +FA+V + LYL+A + + + ++ G N+Y V Sbjct: 1 MFGGHGYYANGKMFALVREKSLYLKAGSGNVADFLLTGQLPYIHQCFGEYFPTNFYSVPL 60 Query: 87 SLWRNQLKLVRLSKYSLDA-ALKEKSTRNT 115 + ++ +L + ++ EK+ + + Sbjct: 61 DVIEDEDQLTKWIAKAIRQLEQAEKTAKAS 90 >UniRef50_B8DD74 TfoX domain protein n=15 Tax=Bacteria RepID=B8DD74_LISMH Length = 89 Score = 92.3 bits (228), Expect = 9e-18, Method: Composition-based stats. Identities = 30/84 (35%), Positives = 45/84 (53%) Query: 115 TRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGA 174 L +LPN+ LE L + GIK L+ +G+K +LR+ + +S V L LEGA Sbjct: 6 VMANLSELPNIGKVLEQDLIKAGIKTPGELKDVGSKEAFLRIWENDSSVCLSELCALEGA 65 Query: 175 IIGIHEAALPVARRQELAEWADSL 198 + GI L A++ EL ++ SL Sbjct: 66 VQGIRWHDLDEAKKSELKKFHQSL 89 >UniRef50_B3PJ08 TfoX C-terminal domain superfamily n=2 Tax=Gammaproteobacteria RepID=B3PJ08_CELJU Length = 98 Score = 90.4 bits (223), Expect = 4e-17, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 41/82 (50%) Query: 117 ERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAII 176 L L N+ IL +GI L+ GA + R++ ++ V++ +L+ L+GA++ Sbjct: 6 SELLQLKNLGMASVNILRAIGINTQADLKRTGAVEAYRRIKARDINVSKVMLYALQGALM 65 Query: 177 GIHEAALPVARRQELAEWADSL 198 +H L +++L E A+ Sbjct: 66 DVHWNDLAPDLKRKLVEDAEGK 87 >UniRef50_A0YEW5 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YEW5_9GAMM Length = 90 Score = 88.4 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 38/83 (45%) Query: 115 TRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGA 174 L +L N+ L +G+K + L +GA + ++++ V+ +L+ L GA Sbjct: 1 MSSDLMELKNLGNTSINWLRSIGVKSQQDLERMGAVAAYNEIKRRGIRVSRVLLYALHGA 60 Query: 175 IIGIHEAALPVARRQELAEWADS 197 +I H L +Q L E AD Sbjct: 61 MIDKHWKDLDNDTKQSLLEQADG 83 >UniRef50_D2R5J8 TfoX domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5J8_9PLAN Length = 154 Score = 88.4 bits (218), Expect = 1e-16, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 34/85 (40%) Query: 111 STRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFM 170 E +++L N+ L ++G+ + LR LGA + +++ + + +L+ Sbjct: 66 RATELAEPIENLRNLGPTSCRWLHDMGVYTIDELRKLGAVDTFRIVKRSHPEASLNLLYA 125 Query: 171 LEGAIIGIHEAALPVARRQELAEWA 195 L + L +Q L A Sbjct: 126 LVAGLADRDFRDLSEEEKQTLRSAA 150 >UniRef50_C1D080 Putative uncharacterized protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1D080_DEIDV Length = 88 Score = 88.1 bits (217), Expect = 2e-16, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 29/80 (36%) Query: 116 RERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAI 175 + L N+ +L VGI V LR +G + RL+ + +L+ + + Sbjct: 6 SASVALLLNLGDKSARMLSSVGIHTVGELRAVGPVEAYQRLQVMGERPSLTLLWAMVAGL 65 Query: 176 IGIHEAALPVARRQELAEWA 195 G H L + L Sbjct: 66 RGEHWNTLGHKEKLSLQRQL 85 >UniRef50_B3ENR6 TfoX domain protein n=2 Tax=Bacteria RepID=B3ENR6_CHLPB Length = 90 Score = 87.3 bits (215), Expect = 3e-16, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%) Query: 115 TRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKI---LFML 171 L +L N+ + ++L E GI + LR +G ++R+ + T + L+ Sbjct: 5 RNRPLAELKNIGRKIASLLNEAGIHSEQELRSVGPVEVHKKIRENHPDETLPLCYYLYSF 64 Query: 172 EGAIIGIHEAALPVARRQELAE 193 EGA+ H A+ R++EL E Sbjct: 65 EGALCDQHWDAIGEERKRELKE 86 >UniRef50_C6MIE5 TfoX domain protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MIE5_9PROT Length = 104 Score = 86.5 bits (213), Expect = 5e-16, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 35/90 (38%), Gaps = 3/90 (3%) Query: 116 RERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKI---LFMLE 172 DL N+ + L EVGI L+ +GA +R+++ + + L+ E Sbjct: 4 NRSHADLKNIGKKIVGRLNEVGIFSEDDLKRVGAVEVHRLIRERHPGESLPVCYYLYSFE 63 Query: 173 GAIIGIHEAALPVARRQELAEWADSLTPKQ 202 GA+ H + R+ +L Q Sbjct: 64 GALTDKHWGEIGAPRKHQLKTQIGHHNTAQ 93 >UniRef50_C9A884 Predicted protein n=5 Tax=Firmicutes RepID=C9A884_ENTCA Length = 94 Score = 85.4 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 1/92 (1%) Query: 109 EKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLR-QQNSLVTEKI 167 L+ LPN+ L L +GI LR A+ +L +R Q ++ + Sbjct: 3 TIKKEKPMNELQKLPNVGQVLADHLVRIGINTSEQLRTKTAEEVFLAIRHQCDAGACLHM 62 Query: 168 LFMLEGAIIGIHEAALPVARRQELAEWADSLT 199 L+ +EGAI GI +A L R+Q L + + L+ Sbjct: 63 LYGIEGAIQGIPKAQLTHQRKQALRLFFNQLS 94 >UniRef50_C7PVA9 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PVA9_CATAD Length = 101 Score = 85.4 bits (210), Expect = 1e-15, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 1/98 (1%) Query: 111 STRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQ-QNSLVTEKILF 169 S+ T +++ N+ L L +VG+ + +R GA W + +L Sbjct: 2 SSTETVTLIQNAVNIGPVLTQRLRDVGVTTLDEVRERGAIEVWQLIAHTAEGNECAHMLL 61 Query: 170 MLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAE 207 LEGA+ G ++P + R L + + Sbjct: 62 ALEGALRGQRWTSIPRSERDALLVEVGLKDASELRAPK 99 >UniRef50_C6VKM5 Putative uncharacterized protein n=3 Tax=Lactobacillus plantarum RepID=C6VKM5_LACPJ Length = 94 Score = 84.2 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 23/89 (25%), Positives = 40/89 (44%) Query: 110 KSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILF 169 + N L LPN+ L L V I L+ G+K+ + +++ N ++L+ Sbjct: 5 RKDLNLVALLTTLPNIGPTLAKQLQAVAITTPEQLKSTGSKVAFTAIKKANPHACIQLLY 64 Query: 170 MLEGAIIGIHEAALPVARRQELAEWADSL 198 L+ AI L A R++L ++ SL Sbjct: 65 SLQVAIENCAYPQLSPATREDLKQFFRSL 93 >UniRef50_C8SI00 TfoX domain protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SI00_9RHIZ Length = 92 Score = 84.2 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 1/84 (1%) Query: 115 TRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLR-QQNSLVTEKILFMLEG 173 R++D+ N+ + +L E+ I LR G + RL+ + VT L+ + Sbjct: 1 MSTRIQDMRNLGPAMARMLAEIDILCEVDLRGFGVVEAYHRLKFRFGRQVTILALYSMGA 60 Query: 174 AIIGIHEAALPVARRQELAEWADS 197 A+ G AL ++ L E A Sbjct: 61 ALRGCDWRALDAETKEHLREQAHQ 84 >UniRef50_C3R3W1 TfoX n=2 Tax=Bacteroides RepID=C3R3W1_9BACE Length = 90 Score = 84.2 bits (207), Expect = 3e-15, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 3/89 (3%) Query: 112 TRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKI---L 168 L++ N+ +E L E+GI + L + ++++R+Q+ T + L Sbjct: 2 KSKIDNNLRNAKNIGATIEKYLNEIGIFTLADLAETTSVKAFIKIREQHPEKTIPVCYYL 61 Query: 169 FMLEGAIIGIHEAALPVARRQELAEWADS 197 + LEGA++ +H +P ++EL + Sbjct: 62 YSLEGALLNLHWNDIPSELKKELKDKIQD 90 >UniRef50_C2BTB0 Putative uncharacterized protein n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BTB0_9ACTO Length = 108 Score = 83.8 bits (206), Expect = 4e-15, Method: Composition-based stats. Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 2/81 (2%) Query: 114 NTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEG 173 L DLPN+ L L E GI L +G+ W R+ + L LEG Sbjct: 26 ALMNDLTDLPNIGPKLAQALIEAGIDTPAKLAEVGSVEAWWRV--HPRFTCQHSLLALEG 83 Query: 174 AIIGIHEAALPVARRQELAEW 194 AI G+ ++ L R+ L + Sbjct: 84 AIQGVPKSLLNQEIRERLRQE 104 >UniRef50_Q2RS88 Putative uncharacterized protein n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RS88_RHORT Length = 121 Score = 81.9 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 8/116 (6%) Query: 5 SYKRIYKSQEYL----ATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 +R + L A LG +E R + + L +D +FA+VS G L+ R + + Sbjct: 3 DKERGRYVRALLPVMRAALGQVESRDMTDATGLYLDGVLFALVSGGRLHFRTDPINREDY 62 Query: 61 VKHPPVWLT---YKKCGRSVTLNYYR-VDESLWRNQLKLVRLSKYSLDAALKEKST 112 + + G +R V + + L + + + +AA + + Sbjct: 63 DRWEATSGRESEFFSGGLPAGGQKFRVVPPFVLDDGDTLAQWGRAAWEAAKRARVP 118 >UniRef50_D0LJU3 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJU3_HALO1 Length = 133 Score = 81.5 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 6/127 (4%) Query: 2 KSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCV 61 L IE +++FG+ + ++ +FA ++ LR E + + + Sbjct: 4 PKTDPSAKEFLDSLLPPEPAIERKAMFGNTAAFLNGHMFAGTFGSDIILRLPESAREQLL 63 Query: 62 KH-PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAAL----KEKSTRNTR 116 GR + Y V + + + SL+ KE+ R Sbjct: 64 AEPGCQPFAPPPQGRVMR-EYVVVPRAWREHPERARPWLVTSLEWITSLPPKERRPRRKP 122 Query: 117 ERLKDLP 123 ++ K P Sbjct: 123 KQSKARP 129 >UniRef50_A9M4D2 Cytidine and deoxycytidylate deaminase family protein n=26 Tax=Neisseriaceae RepID=A9M4D2_NEIM0 Length = 239 Score = 81.5 bits (200), Expect = 2e-14, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 37/87 (42%) Query: 123 PNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAA 182 P ++ A L +GI+ + LR G+ +L L+ +T+ L+ L+ + Sbjct: 5 PPLAPKTVAALHRLGIRTLEELRQNGSVKAFLLLKASGLTLTKSTLWQLQSLLDDTLPQE 64 Query: 183 LPVARRQELAEWADSLTPKQEFPAELE 209 + A + L + P FP++ E Sbjct: 65 MSQAHKARLLAELKNHPPVAAFPSQEE 91 >UniRef50_Q2SF07 Regulator of competence-specific genes n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SF07_HAHCH Length = 100 Score = 81.1 bits (199), Expect = 2e-14, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%) Query: 118 RLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN-SLVTEKILFMLEGAII 176 RL+DL + E L ++G+ LR +G +LRL+Q + + L+ + GA+ Sbjct: 2 RLRDLKGLGPKSEKDLVDIGVDTPEKLREIGPVRAFLRLKQASARKPSLNFLYAMVGAVE 61 Query: 177 GIHEAALPVARRQELAEWADS 197 H + + + L + Sbjct: 62 DRHWMEIAKSEKTRLLTELEG 82 >UniRef50_A3Y6J4 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6J4_9GAMM Length = 98 Score = 80.7 bits (198), Expect = 3e-14, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 33/92 (35%) Query: 110 KSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILF 169 K ++ R++DL E I +V I V + +L+++ ++ Sbjct: 5 KKQTASKNRIRDLKGFGPKSEEIFAKVDIHSVEDFMNAEPFALYAKLKREVKGTGLNSIY 64 Query: 170 MLEGAIIGIHEAALPVARRQELAEWADSLTPK 201 + GA H + ++ E+ D + Sbjct: 65 AIIGAREDRHWQEVARTQKSEILMRLDDMGLA 96 >UniRef50_B2UPV3 TfoX domain protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UPV3_AKKM8 Length = 124 Score = 79.6 bits (195), Expect = 6e-14, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 3/118 (2%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC-- 60 + S + L G I +R +FG Y L T F +V D +LY++ E + Sbjct: 7 ASSPDVVEYICFQLRHAGDISFRKMFGDYGLYCGRTFFGLVCDNQLYVKITEPGLKMFPQ 66 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 + + + L+ R+ SL R ++ L+ K+ S R Sbjct: 67 QEQGCPYPGARPHFLVTELDDDRILSSLVRETCSVLA-VPSVLEGKKKKASGEKRSRR 123 >UniRef50_C3JJ36 TfoX domain protein n=2 Tax=Rhodococcus erythropolis RepID=C3JJ36_RHOER Length = 112 Score = 79.2 bits (194), Expect = 7e-14, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 7/99 (7%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 S S + + + E L L + R++FG Y L D+ + ++ L+++ E S ++ + Sbjct: 2 STSKETVARILEQLEPL-DVRARAMFGEYGLYCDEKIVGLICGDVLFVKPTEVSTEFGSE 60 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKY 101 +YYRV E ++ L + Sbjct: 61 ADLAP------PYPGAKDYYRVTEERLQDLDHLHAFIQR 93 >UniRef50_Q0B3M2 TfoX, N-terminal domain protein n=10 Tax=Burkholderia RepID=Q0B3M2_BURCM Length = 120 Score = 76.5 bits (187), Expect = 5e-13, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 40/114 (35%), Gaps = 8/114 (7%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 + S + E +A GT+ R +FG Y + D + A+V D L+++ + Sbjct: 15 ASSQGTVDFIVEQMALAGTVSARKMFGEYGIYCDGKMVALVCDDRLFVKPTYDGRAFVGA 74 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTR 116 + + W ++ L L + + AA + +R Sbjct: 75 CDEAP------PYPAAKPHLVIGGDRWDDREWLSTLIR--ITAAQLPVPMKRSR 120 >UniRef50_A4YVE3 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YVE3_BRASO Length = 67 Score = 76.1 bits (186), Expect = 6e-13, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQY 59 + I +E A LG IE R +FG + +D + MV+D LY R + + Sbjct: 3 ATPDYIDFLREQFAPLGPIETRRMFGKTGIFIDGAMLGMVADNTLYFRVDDDIDRR 58 >UniRef50_B9Y4D8 Putative uncharacterized protein n=2 Tax=Firmicutes RepID=B9Y4D8_9FIRM Length = 113 Score = 75.7 bits (185), Expect = 1e-12, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 45/116 (38%), Gaps = 8/116 (6%) Query: 7 KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV 66 + + + LA GTI ++ +FG L D FA++ D +L+++ + A P Sbjct: 6 EFVTYVTDQLALAGTITWKRMFGEVGLYCDQVFFAVICDDQLFIKITPEVAARIPDCPKA 65 Query: 67 WLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDL 122 + +++ ++ L + K + DA K K R + + Sbjct: 66 P------PYPGAKESFLIED--LDDRETLAEIVKATCDALPKPKPRRPKTSKAESR 113 >UniRef50_A6P212 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P212_9BACE Length = 107 Score = 73.4 bits (179), Expect = 5e-12, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 9/111 (8%) Query: 7 KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV 66 + E L G I R +FG Y L DD FA++ D + +++ Q P Sbjct: 6 DFVDYVAEQLREAGAIRSRKMFGEYGLYCDDVFFAVICDDQFFVKVTPQGEVAFPHLPKA 65 Query: 67 WLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRE 117 Y+ G + + ++ + L++ + + AL+ K + R+ Sbjct: 66 P-PYEGAGDAFLV-------EDVEDRELMTELTRITCE-ALRSKPKKPGRK 107 >UniRef50_A8GPA9 Putative uncharacterized protein n=1 Tax=Rickettsia akari str. Hartford RepID=A8GPA9_RICAH Length = 89 Score = 72.3 bits (176), Expect = 9e-12, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 37/76 (48%) Query: 37 DTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLV 96 ++ ELY ++ + +Y Y+ G+ VTL+Y++V + +Q L Sbjct: 9 GVKVGIIKRNELYFKSELSTDEYLQSCRSEAFVYQSKGKFVTLSYWKVLPEIMEDQELLG 68 Query: 97 RLSKYSLDAALKEKST 112 + K +L+AA+ +K+ Sbjct: 69 KWFKLALNAAINKKNK 84 >UniRef50_Q2BP97 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BP97_9GAMM Length = 75 Score = 71.1 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Query: 122 LPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRL-RQQNSLVTEKILFMLEGAIIGIHE 180 + N+ L EV + D+ L+ +G + + + V+ +L+ LEGA+ I Sbjct: 1 MRNIGPVSRRWLAEVDVYDLADLKQVGVIGTYRMVCAVKGKKVSLNLLWALEGALQEIDC 60 Query: 181 AALPVARRQELAE 193 L + EL + Sbjct: 61 RDLSPECKAELKQ 73 >UniRef50_C3L1N8 Putative uncharacterized protein n=4 Tax=Clostridium botulinum RepID=C3L1N8_CLOB6 Length = 80 Score = 68.8 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 32/55 (58%) Query: 142 RALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAEWAD 196 L+ +G + WL++++ +S L LEGAI G+ + ALP R+ EL ++ + Sbjct: 21 DELKDIGTEQAWLKIQEIDSSACIHRLLALEGAIQGVKKTALPQERKAELKDFYN 75 >UniRef50_UPI0001698456 spermidine synthase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698456 Length = 60 Score = 66.1 bits (160), Expect = 7e-10, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Query: 27 LFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKC-GRSVTLNYYR 83 +FG D A++ + LYL+A + S+++ + +Y++ G+ +++ +Y Sbjct: 1 MFGDAGAYCDGLFCAILEEDSLYLKADDASSEHFRQVGQSSFSYQRKDGKQISMKFYS 58 >UniRef50_Q2KD12 Hypothetical conserved protein n=1 Tax=Rhizobium etli CFN 42 RepID=Q2KD12_RHIEC Length = 82 Score = 64.6 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 1/63 (1%) Query: 44 SDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTL-NYYRVDESLWRNQLKLVRLSKYS 102 G LYLR +Y+ GR V + YY V + + L R S+ + Sbjct: 1 MKGTLYLRVDAAMRAEFEADGAEPFSYRAAGREVRVRRYYAVPAHVIDDPWLLRRCSERA 60 Query: 103 LDA 105 L A Sbjct: 61 LHA 63 >UniRef50_Q1GI25 TfoX domain protein n=16 Tax=Rhodobacterales RepID=Q1GI25_SILST Length = 111 Score = 64.6 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 31/88 (35%) Query: 115 TRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGA 174 + + N+ E GI LR LGA + +L Q S ++L A Sbjct: 1 MSTPVSSIKNLGPAYETACTRAGIHSAEELRALGADAAYGKLLQSGSKPHFIGYYVLVMA 60 Query: 175 IIGIHEAALPVARRQELAEWADSLTPKQ 202 + G ++ L + D+L + Sbjct: 61 LQGRPWNDCKGEEKKVLRKRFDALKAQS 88 >UniRef50_C8S2C6 TfoX domain protein n=1 Tax=Rhodobacter sp. SW2 RepID=C8S2C6_9RHOB Length = 113 Score = 64.2 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 15/98 (15%), Positives = 28/98 (28%), Gaps = 9/98 (9%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 + E + G + R +FG Y++ D V ++ D +L L+ Sbjct: 2 ATDADTARYILEQMQGAGNVAIRPMFGEYAVYCDGKVVGLICDNQLTLKPTPGLRALLPD 61 Query: 63 HPP-VWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLS 99 K + + + L RL Sbjct: 62 AVLGEPYPGVKPQIVI--------DEALDDPALLARLV 91 >UniRef50_A6LTJ3 TfoX, N-terminal domain protein n=15 Tax=Clostridiales RepID=A6LTJ3_CLOB8 Length = 110 Score = 64.2 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 25/61 (40%) Query: 7 KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV 66 + + E ++ G I YR +FG Y + + + ++ D + +L+ + + Sbjct: 6 EFVEYVCEQISGAGRITYRKMFGDYGIYCNQKIIGLICDNQFFLKITKGGRNLLCEVIEA 65 Query: 67 W 67 Sbjct: 66 P 66 >UniRef50_C0D5B0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D5B0_9CLOT Length = 127 Score = 63.8 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 32/98 (32%), Gaps = 9/98 (9%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 + + + + L+ G I YR LFG Y L D F V +LYL+ E + Sbjct: 2 ASTREYMEFVAGQLSGAGAITYRKLFGEYGLYCDGKFFGTVEGNQLYLKVTEAGRRLLPD 61 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSK 100 + ++ L +L + Sbjct: 62 AEIASPHEGSN---------LLTVEEVEDREFLAKLVR 90 >UniRef50_B1CBH6 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CBH6_9FIRM Length = 113 Score = 63.0 bits (152), Expect = 6e-09, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 S S + + E L LG I+ + +FG Y L F + D +L+++ + + K Sbjct: 15 STSIEFVDYVYENLKPLGDIKCKKMFGEYGLWYKGKFFGCICDNQLFIKDTDSGRKILGK 74 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALK 108 Y+ + + ++ L+ L + D +K Sbjct: 75 DILFASPYQGAKEHIVI-------ENIEDKNTLIDLIINTYDELIK 113 >UniRef50_C1ADW7 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1ADW7_GEMAT Length = 138 Score = 62.3 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 7/122 (5%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 S + E +A + R +FG Y+L +D V ++ D ++L+ +A Sbjct: 2 GSSQDYVDFVTERIALGARLTTRKMFGEYALYLDGKVLVLICDNSVFLKPLPANAAL--A 59 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDL 122 + ++ + V + L ++ +L + + + DA K + Sbjct: 60 TGLPQGSPYPGAKA-----HWVLDELLEDRDRLQEILQVTADALPAPKPKTQKAAKTSKA 114 Query: 123 PN 124 N Sbjct: 115 AN 116 >UniRef50_A4BB23 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BB23_9GAMM Length = 88 Score = 61.9 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 31/83 (37%) Query: 116 RERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAI 175 L L + +A+L E+GI D + + + V+ +L+ + GA Sbjct: 1 MAALSSLMGLGQKSQAMLAEIGIVDTERFLASDPFELYRAMAEAGVPVSLNLLYAMIGAQ 60 Query: 176 IGIHEAALPVARRQELAEWADSL 198 H + RR ++ + + Sbjct: 61 EQCHWQQVKRERRLDILMRLEDM 83 >UniRef50_A8F2A7 Regulator of competence-specific genes TfoX n=8 Tax=spotted fever group RepID=A8F2A7_RICM5 Length = 94 Score = 60.3 bits (145), Expect = 4e-08, Method: Composition-based stats. Identities = 9/47 (19%), Positives = 20/47 (42%) Query: 7 KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRAC 53 + +E L G++ ++FG Y + + ++ ELY + Sbjct: 24 EFTEYVKELLEPYGSVAVCAMFGGYGIYNGGVIIGIIKSNELYFKLD 70 >UniRef50_A7VSF0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VSF0_9CLOT Length = 139 Score = 59.9 bits (144), Expect = 6e-08, Method: Composition-based stats. Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 6/112 (5%) Query: 7 KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV 66 + + + L + R +FG Y L FA V D +L+ +A Sbjct: 34 EFVQFVCDQLGE--QVSCRRMFGEYGLFAHGKYFACVCDNQLFFKATPGGRMLLGSALAS 91 Query: 67 WLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 Y V + ++ L RL + + + K + + Sbjct: 92 CQLEPP--YPGAAPYLLVTQ--LEDRELLSRLLEATCRELPEPKPRKKRAGK 139 >UniRef50_Q7NH59 Glr2678 protein n=3 Tax=Bacteria RepID=Q7NH59_GLOVI Length = 113 Score = 59.2 bits (142), Expect = 8e-08, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 7/97 (7%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 + + + +A G I R +FG Y++ V A+V D +L+++ Sbjct: 2 ASDESFVTYVCDQMAGAGHISSRKMFGEYAIYYGVKVVALVCDNQLFIKPTPTGKTAI-G 60 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLS 99 +P + Y Y V + ++ L RL Sbjct: 61 NPVEAIPY-----PGAKPQYLVTDR-LDDKDWLARLV 91 >UniRef50_C5EHW3 TfoX domain-containing protein n=2 Tax=Clostridiales RepID=C5EHW3_9FIRM Length = 119 Score = 59.2 bits (142), Expect = 9e-08, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 32/97 (32%), Gaps = 8/97 (8%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 + S + LA G I Y+ LFG Y L F V D + Y++ Sbjct: 2 ASSLGYVQYVASQLAGAGVITYKKLFGEYGLWCGGKFFGTVEDNQFYVKMTNAGHLLLPD 61 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLS 99 P G + Y V++ + L RL Sbjct: 62 AEPAA----PHGGEPGM--YLVED--LDDADFLARLV 90 >UniRef50_A8LIY0 TfoX domain protein n=15 Tax=Rhodobacterales RepID=A8LIY0_DINSH Length = 109 Score = 57.6 bits (138), Expect = 2e-07, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 28/88 (31%) Query: 115 TRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGA 174 L+ + N+ + L G+ AL +GA +LRL + + + Sbjct: 1 MTTPLETVRNIGPAMADALRLAGVGSAEALVAMGADAAYLRLLNHGARPHFIAYYAMVMG 60 Query: 175 IIGIHEAALPVARRQELAEWADSLTPKQ 202 + G A + L D L Sbjct: 61 LQGRPWNDAKGAEKAALRVRFDRLKADA 88 >UniRef50_Q65R00 Putative uncharacterized protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65R00_MANSM Length = 128 Score = 56.9 bits (136), Expect = 5e-07, Method: Composition-based stats. Identities = 7/59 (11%), Positives = 22/59 (37%) Query: 47 ELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDA 105 ++++ ++ V Y G+ ++Y+ + + + KL + + A Sbjct: 66 RIFVKTNAETLPVFQAKGAVQYEYFSRGKRQKMHYWSIPDEDVEEREKLQQWFDLGIKA 124 >UniRef50_C7R6U9 TfoX domain protein n=5 Tax=Bacteria RepID=C7R6U9_KANKD Length = 114 Score = 55.7 bits (133), Expect = 1e-06, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 17/107 (15%) Query: 7 KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLR---ACEQSAQYCVKH 63 + + E +A +R +FG Y+L V A++ D +L+++ A ++ V+ Sbjct: 6 EFVEFVVEQIADECETTFRKMFGEYALYSKGKVVALICDNQLFIKPTVAGKEFIGDYVEA 65 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEK 110 P L +Q++ + +E Sbjct: 66 PAYPGAK--------------PSLLIEDQIEESEWLTQLIRITEREL 98 >UniRef50_P22043 Uncharacterized 12.7 kDa protein in trpE 5'region n=1 Tax=Spirochaeta aurantia RepID=YTR3_SPIAU Length = 115 Score = 55.3 bits (132), Expect = 1e-06, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 34/117 (29%), Gaps = 9/117 (7%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCV- 61 + + + +FG Y+L VD+ V + D L+ + ++ Sbjct: 2 ATDASYAAFVVDQAGPRLRVRVGRMFGEYALYVDEKVVGFLCDNRTLLKPTDAGREFFEN 61 Query: 62 KHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 +Y+ V + + + L + + A K + + Sbjct: 62 PEIGHPY-------PGAKDYW-VADDVVEEAPRFQDLLRVTAAALPAPKPRKAKTKT 110 >UniRef50_Q0F1P7 TfoX-like protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1P7_9PROT Length = 106 Score = 55.3 bits (132), Expect = 1e-06, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 6/75 (8%) Query: 25 RSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRV 84 + +FG Y L +D +V D L+L+ + Y K + ++ Sbjct: 17 KKMFGEYCLYLDGKPVGLVCDDLLFLKPTKGGRALLSDI-VEASPYPKARPHL-----QI 70 Query: 85 DESLWRNQLKLVRLS 99 D W + L L Sbjct: 71 DPDAWEDSDWLCELI 85 >UniRef50_C1B991 Putative uncharacterized protein n=1 Tax=Rhodococcus opacus B4 RepID=C1B991_RHOOB Length = 120 Score = 54.9 bits (131), Expect = 2e-06, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 39/119 (32%), Gaps = 3/119 (2%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M S + + + +E + +FG+ V+ +FA + + +R + A+ Sbjct: 3 MPKPSEEDKQFFRSLIPDTPGVEVKPMFGNLGAFVNGNMFAGLLGPSVGVRLLTEQAKDE 62 Query: 61 VKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLD--AALKEKSTRNTRE 117 + + + + Y + V + ++ A L K + + Sbjct: 63 LASTDGVGGFGPGEKPMR-EYLALPNHWRDTPDLAVPWIERAIAEVAELPPKQPKARKR 120 >UniRef50_UPI0001C324A5 RNA methyltransferase TrmH, group 3 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C324A5 Length = 114 Score = 53.8 bits (128), Expect = 4e-06, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 2/103 (1%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 + + + + LA G I R +FG + + V G L LR + ++ Sbjct: 3 ADAQLVDRVRAALADAGEISERRMFGGVAFLSSGNMVCAVVGGRLLLRLGTDGTEAALRE 62 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAA 106 P GR + + L + +L A Sbjct: 63 PHTRPMDFT-GRPARGAIFVEPPGCATDPA-LRAWVERALGFA 103 >UniRef50_B9CN82 TfoX domain protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CN82_9ACTN Length = 107 Score = 53.4 bits (127), Expect = 5e-06, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 7/112 (6%) Query: 7 KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV 66 + +E + G I RS+ G Y + ++ + + D EL+L+ S + Sbjct: 3 EFNEYVREVFSVAGDIVIRSMMGGYLVYLNGKLIGDIGDNELFLKRTPTSDRLLADSE-- 60 Query: 67 WLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRER 118 L Y G ++ + + + ++ L ++K + RER Sbjct: 61 -LRYPYEGSKTLMHVF----DRFEDTALVLELLDGMYAELPEKKPAKARRER 107 >UniRef50_Q12WV8 Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12WV8_METBU Length = 128 Score = 53.4 bits (127), Expect = 6e-06, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 2/102 (1%) Query: 2 KSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCV 61 K S + EY+A E+R +FGS V +F V + LR E+ Q Sbjct: 5 KKASEELGELVGEYVAEY-DAEFRKMFGSPVHFVKGNMFVGVHGDGIMLRLKEEDQQKLY 63 Query: 62 KHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSL 103 + GR + Y + S++ ++++L + S Sbjct: 64 AEHDEATPFTPNGRRMR-EYAILPPSVYDDEMELRKWLDISY 104 >UniRef50_A5MZN3 Putative uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=A5MZN3_CLOK5 Length = 96 Score = 52.2 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 21/39 (53%) Query: 133 LGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFML 171 + EVGI L+ +GA+ WL++++ ++ L L Sbjct: 1 MNEVGIFTYDELKDIGAEQAWLKIQEIDASACIHRLLAL 39 >UniRef50_C0CMT7 Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CMT7_9FIRM Length = 114 Score = 52.2 bits (124), Expect = 1e-05, Method: Composition-based stats. Identities = 13/108 (12%), Positives = 33/108 (30%), Gaps = 8/108 (7%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 + E LA LG I Y + G + + + + ++ S ++ + Sbjct: 2 AQKELALYVAEQLAPLGEIRYIPMMGGWLFYYREKLIGGIYGDGFAVKDTSVSRRFMPEC 61 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKS 111 T + ++ + KL ++ + + K+ Sbjct: 62 REEVWTDTPAA--------LLPCTILEDSGKLCQMVREMYSELPEPKA 101 >UniRef50_Q28RC0 TfoX-like protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28RC0_JANSC Length = 120 Score = 51.1 bits (121), Expect = 3e-05, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 33/86 (38%) Query: 118 RLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQNSLVTEKILFMLEGAIIG 177 + + N+ +L GI ALR LGA + + + + + ++L A+ G Sbjct: 14 PVTVIRNIGPAQAEVLAAAGIHTAAALRKLGAHEAYRAILRTGTAPHFIMYYVLHMALQG 73 Query: 178 IHEAALPVARRQELAEWADSLTPKQE 203 A ++ L D+L + Sbjct: 74 RPWNDCKGAEKEALRAQFDALKAGEA 99 >UniRef50_C7N2U0 Regulator of competence-specific genes n=2 Tax=Coriobacteriaceae RepID=C7N2U0_SLAHD Length = 99 Score = 50.7 bits (120), Expect = 3e-05, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 23/61 (37%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 + S + + + L + + ++ + G Y L +F V D L++ + + Sbjct: 2 ASSPEYLEFVLDLLRDVPDVTHKKMMGEYLLYSQRILFGGVYDDRFLLKSTASARGAFPQ 61 Query: 63 H 63 Sbjct: 62 E 62 >UniRef50_B8HE86 Putative uncharacterized protein n=4 Tax=Actinomycetales RepID=B8HE86_ARTCA Length = 133 Score = 50.3 bits (119), Expect = 4e-05, Method: Composition-based stats. Identities = 13/129 (10%), Positives = 41/129 (31%), Gaps = 12/129 (9%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 M S + + + + + + +FG+ ++ +FA + + ++ + Sbjct: 3 MPKASEQDKERFRRVVPDHPDVVVKPMFGNLGAFINGNMFAGLFGSTIGVKLSDADRNVL 62 Query: 61 V-KHPPVWLTYKKCGRSVTLNYYRVDESLWR-----NQLKLVRLSKYSLD--AALKEKST 112 V + + Y +W + + ++ +L+ A L K Sbjct: 63 ESSERTVPFGPAER----PMGGYTGLPEVWNEEGDGDDTRARAWAEKALEYIATLPPKEP 118 Query: 113 RNTRERLKD 121 + + + Sbjct: 119 KARTPKART 127 >UniRef50_B0MQR8 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQR8_9FIRM Length = 106 Score = 50.3 bits (119), Expect = 5e-05, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 27/63 (42%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 + S + I E L + + Y+ +FG Y + V+D +V D +Y++ + + Sbjct: 2 ATSQEYIEFVCEQLVGIENVRYKKMFGEYMVYVNDKPVLLVCDNTVYVKKLPEIEELMSG 61 Query: 63 HPP 65 Sbjct: 62 AEC 64 >UniRef50_D0WFB2 TfoX domain protein n=3 Tax=Bacteria RepID=D0WFB2_9ACTN Length = 110 Score = 49.9 bits (118), Expect = 5e-05, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 41/117 (35%), Gaps = 9/117 (7%) Query: 1 MKSLSY--KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQ 58 M+ + + ++ + G I + + G Y + + + + + EL+L+ S + Sbjct: 1 MEGTTKVNEFNEYVRDSFSESGDIAIKPMMGGYLVYFNGKLIGDIGNNELFLKRTPTSDR 60 Query: 59 YCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNT 115 L Y G ++ + + ++ + L ++K ++ Sbjct: 61 LLADSE---LRYPYEGSKTLMHVF----DSFDDKALIQELLDGMYAELPEKKPSKAR 110 >UniRef50_A8TN06 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN06_9PROT Length = 61 Score = 48.8 bits (115), Expect = 1e-04, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 17/61 (27%), Gaps = 1/61 (1%) Query: 48 LYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAAL 107 LYL+ + V R L +Y + L ++ AA Sbjct: 2 LYLKVNAATRSLFVAAGCRPFQMSLD-RPSRLVFYTLPADAVVGSDALDLWLDRAIVAAS 60 Query: 108 K 108 + Sbjct: 61 R 61 >UniRef50_C7N501 Regulator of competence-specific genes n=6 Tax=Bacteria RepID=C7N501_SLAHD Length = 103 Score = 48.0 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 9/64 (14%), Positives = 22/64 (34%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 + S + + E L+ L + R++ G Y + V + D ++ + + Sbjct: 2 ASSKEYLDYILEQLSDLEDVSCRAMMGEYIIYYRGKVIGGIYDDRFLVKPTKSAQAMMPD 61 Query: 63 HPPV 66 Sbjct: 62 AEME 65 >UniRef50_Q21LZ5 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21LZ5_SACD2 Length = 110 Score = 48.0 bits (113), Expect = 2e-04, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 4/96 (4%) Query: 8 RIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRA-CEQSAQYCVKHPPV 66 + + + + I + +FG + + + V + L R +Q + Sbjct: 7 LVNRLRTHFDGRDDIIEKRMFGGMAFMLGGHMCVGVLNDALVARIGPDQHKESLASMYAS 66 Query: 67 WLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYS 102 Y G+ + Y E + + L Sbjct: 67 PFDYT--GKPLNGFVYVAPEGISTDND-LADWVSKC 99 >UniRef50_C1C6S9 TfoX N-domain family protein n=18 Tax=Streptococcus pneumoniae RepID=C1C6S9_STRP7 Length = 75 Score = 46.8 bits (110), Expect = 4e-04, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 23/72 (31%), Gaps = 3/72 (4%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 + S + E L+ L + YRS+ G Y L + + D ++ K Sbjct: 2 ASSKNYLEFVLEQLSGLDDVTYRSMMGEYILYFRGKIIGGIYDDRFLVK---PVQAVLDK 58 Query: 63 HPPVWLTYKKCG 74 + G Sbjct: 59 IDQSSFEFPYKG 70 >UniRef50_D0RUB2 TfoX domain-containing protein n=6 Tax=Bacteria RepID=D0RUB2_9STRE Length = 107 Score = 46.5 bits (109), Expect = 6e-04, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 29/61 (47%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 + S + ++ E L+ L I YR++ G Y + + + D +L ++ + + +Y + Sbjct: 2 ASSKEYLFFILEQLSDLDEISYRAMMGEYIIYYKGKIVGGIYDDQLLIKPVKAAQKYMSE 61 Query: 63 H 63 Sbjct: 62 A 62 >UniRef50_B2UWJ1 TfoX N-domain family protein n=21 Tax=Bacteria RepID=B2UWJ1_CLOBA Length = 109 Score = 46.1 bits (108), Expect = 7e-04, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 25/61 (40%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 + S + + E L + + YR + G Y L + +F + D ++ + S Q + Sbjct: 2 ASSQEYLDFIIEQLYIINDVSYRKMMGEYILYYREKIFGGIYDDRFLVKITKASKQLMPE 61 Query: 63 H 63 Sbjct: 62 A 62 >UniRef50_C9RQI1 TfoX domain protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQI1_FIBSS Length = 105 Score = 46.1 bits (108), Expect = 9e-04, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 27/96 (28%), Gaps = 6/96 (6%) Query: 4 LSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 S K + R + G Y D +F + D L ++ + Sbjct: 3 SSEKFRDYVLAQFKGELRVTPRKMMGEYIFYADGKIFGGIYDDRLLVKPVAAAKAMLPNA 62 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLS 99 L Y + + RV + LVRL Sbjct: 63 KLQ-LPYD-GAKPML----RVTAEQIADNGLLVRLL 92 >UniRef50_D1VMM1 Putative uncharacterized protein n=1 Tax=Frankia sp. EuI1c RepID=D1VMM1_9ACTO Length = 126 Score = 45.7 bits (107), Expect = 0.001, Method: Composition-based stats. Identities = 11/103 (10%), Positives = 30/103 (29%), Gaps = 4/103 (3%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQ-YCVKH 63 + + ++ L + + +F + +D + V L LR + ++ Sbjct: 4 DAELAERVRDVLGPRAGLAEKRMFSGLAFLLDGNMVCAVMSRGLMLRVGPDAYPTAIIQD 63 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAA 106 + + + VD + L+ + A Sbjct: 64 GVSPFEMRGRAMN---GWVLVDPAAVAGTDALIDWLDQGVRFA 103 >UniRef50_Q1B8A1 Putative uncharacterized protein n=19 Tax=Actinomycetales RepID=Q1B8A1_MYCSS Length = 119 Score = 45.3 bits (106), Expect = 0.001, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 5/106 (4%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGE--LYLRACEQSAQYCVK 62 + +E ++ + + +FG + +D + A+ + G L +R + ++ Sbjct: 13 DADLADRIREIVSAERGVTEKRMFGGLAFLLDGNM-AVAASGHRGLMVRVPPDQTEELLQ 71 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALK 108 V GR + + RVD+ R +L + +D A Sbjct: 72 REHVAPMIM-SGREI-KGWLRVDDDGVRTMRQLRSWVRRGVDYARA 115 >UniRef50_C5VLE3 TfoX domain protein n=11 Tax=Bacteria RepID=C5VLE3_9BACT Length = 106 Score = 44.9 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 26/59 (44%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKH 63 S I +AT GT+ YR +FG Y + VD+ +V D Y++ E + Sbjct: 4 SLDFIEFVSSQIATAGTVRYRKMFGEYMIYVDEKPVIIVCDNIPYVKEHEAIKSMMLSA 62 >UniRef50_C0YI82 Group 3 RNA methyltransferase TrmH n=5 Tax=Bacteroidetes RepID=C0YI82_9FLAO Length = 152 Score = 43.8 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 4/112 (3%) Query: 5 SYKRIYKSQEYLATLG--TIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVK 62 S + + +E L+ IE + +F S V+ + +S L R + V Sbjct: 43 STELADRVRERLSMENNMEIEEKKMFSGLSFLVNGKMCINISHDNLMCRYDPELEDE-VA 101 Query: 63 HPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRN 114 +L G+ + Y V+ S ++ K LD K K ++ Sbjct: 102 EKMGFLPMIMKGKQL-KGYCYVEPSGFQKPDDFEYWIKICLDYNPKAKVSKK 152 >UniRef50_D0IZT0 Putative uncharacterized protein n=5 Tax=Comamonadaceae RepID=D0IZT0_COMTE Length = 171 Score = 43.8 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 38/98 (38%), Gaps = 3/98 (3%) Query: 7 KRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPV 66 + I ++ L +E +++FG + V+ + V + EL +R S + P V Sbjct: 12 QLIDAVRDALLDCTAVEEKTMFGCHVFMVNGKMCLGVENDELLVRLPPASHAQIAEMPGV 71 Query: 67 WLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLD 104 + + Y+ V + + + + + +L Sbjct: 72 RPLSSRG---LMDGYFLVGPTAYARRDQWLYWIGEALA 106 >UniRef50_C9L3W9 TfoX domain protein n=8 Tax=Bacteria RepID=C9L3W9_RUMHA Length = 106 Score = 43.4 bits (101), Expect = 0.005, Method: Composition-based stats. Identities = 9/49 (18%), Positives = 21/49 (42%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLR 51 + S + + L+ L I YR++ G + + + + D L ++ Sbjct: 2 ASSKEYLEFILGQLSELEEITYRAMMGEFIIYYRGKIVGGIYDDRLLVK 50 >UniRef50_B0MIB9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MIB9_9FIRM Length = 140 Score = 42.6 bits (99), Expect = 0.009, Method: Composition-based stats. Identities = 13/92 (14%), Positives = 33/92 (35%), Gaps = 4/92 (4%) Query: 105 AALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWL-RLRQQNSLV 163 +++ + + L+ +P + + L +GI V L+ + + Q+ Sbjct: 47 EKRQKQENSSGSQDLQTVPGIGKRIAQHLNAIGIYCVDDLKGRDPEELYRMDCIQKGFTE 106 Query: 164 TEKILFMLEGAIIGIHEAALPVARRQELAEWA 195 L++ A+ + A ++L W Sbjct: 107 DRCELYVFRCAV---YYAEHEEHDPEKLKWWY 135 >UniRef50_A2DZ36 Putative uncharacterized protein n=1 Tax=Trichomonas vaginalis RepID=A2DZ36_TRIVA Length = 51 Score = 42.6 bits (99), Expect = 0.010, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 22/45 (48%) Query: 113 RNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLR 157 LK +PN+ + L EVG+K L+ LG+K + +R Sbjct: 2 SEEEAELKLMPNIGETIAKKLNEVGVKTSTDLKKLGSKKAFELIR 46 >UniRef50_A6CBN6 RNA methyltransferase TrmH, group 3 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CBN6_9PLAN Length = 130 Score = 42.2 bits (98), Expect = 0.013, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 2/103 (1%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHP 64 + + L R +FG + + V L LR E++A+ ++ P Sbjct: 24 DEDLAQRVRLLLKRRKGFSERKMFGGICFMLHGNMCCGVIRERLMLRLGEKNARKALEEP 83 Query: 65 PVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLDAAL 107 ++ Y V+++ + + L ++ A Sbjct: 84 DTHEMDFTGKPLKSMIY--VEQAGYESAEDLKYWIHQAVKFAQ 124 >UniRef50_C7NAJ8 TfoX domain protein n=8 Tax=cellular organisms RepID=C7NAJ8_LEPBD Length = 106 Score = 41.5 bits (96), Expect = 0.018, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 26/57 (45%) Query: 3 SLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQY 59 + S + + E L+ + + YR++ G Y L + V + D ++A + + + Sbjct: 2 ASSKEYLNFVLEQLSEVENVRYRAMMGEYILYYREKVIGGIYDDRFLVKAVKSAKEL 58 >UniRef50_A4CK91 Putative uncharacterized protein n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CK91_9FLAO Length = 121 Score = 41.5 bits (96), Expect = 0.018, Method: Composition-based stats. Identities = 11/89 (12%), Positives = 33/89 (37%), Gaps = 4/89 (4%) Query: 22 IEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQY-CVKHPPVWLTYKKCGRSVTLN 80 + + +FG + + V L R + + ++ + + V Sbjct: 26 LTVKYMFGGLAYLYKGKMSVGVVGHSLMARVPANAMEQALLRRGARPMDFTGR---VMKE 82 Query: 81 YYRVDESLWRNQLKLVRLSKYSLDAALKE 109 + VD +R+ ++ + ++ L+ A ++ Sbjct: 83 FVFVDPEGFRDDSEMEQWIEWGLEHARQK 111 >UniRef50_C1F7T1 ImpB/MucB/SamB family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7T1_ACIC5 Length = 441 Score = 41.1 bits (95), Expect = 0.022, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 42/135 (31%), Gaps = 27/135 (20%) Query: 77 VTLNYYRVDESLWRNQLKLVRLSKYSLDAALKEKSTRNTRERLKDLPNMSFHLEAILGEV 136 Y S LV L+ LD AL+ R DLP + +E L E Sbjct: 165 APNRYLSKVASDMDKPDGLVALTPDILDTALRRLVPR-------DLPGVGARMEKRLHEA 217 Query: 137 GIKDVRALRIL---GAKMCWLRLRQQNSLVTEKILFMLEGAIIGIHEAALPVARRQELAE 193 GI + L L G + W V + L+ H EL E Sbjct: 218 GIHTMDELLALDRDGMRRAW-------GSVNGEKLW---------HWLRGEDFHDAEL-E 260 Query: 194 WADSLTPKQEFPAEL 208 S++ P EL Sbjct: 261 HNKSISQSHVLPPEL 275 >UniRef50_Q89D41 Blr7603 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89D41_BRAJA Length = 166 Score = 40.3 bits (93), Expect = 0.039, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 44/121 (36%), Gaps = 4/121 (3%) Query: 5 SYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSD-GELYLRACEQSAQYCVKH 63 + ++ LA + + + G V++T+ VS G + +R ++ ++ Sbjct: 27 DENTAARVRKLLAGQRYVAEKKMMGGLCFMVNNTMCCTVSGRGGMLIRVGPEAHARMLQE 86 Query: 64 PPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSLD-AALKEKSTRNTRERLKDL 122 P + GR +T + RV ++ +L + K LD A + + Sbjct: 87 PHTSPM-EMRGRIMT-GFVRVAPDGYQGDAELKKWVKRGLDFVAANNAGRKAAPRKAVSA 144 Query: 123 P 123 Sbjct: 145 K 145 >UniRef50_A3YIF1 Putative uncharacterized protein n=1 Tax=Marinomonas sp. MED121 RepID=A3YIF1_9GAMM Length = 117 Score = 40.3 bits (93), Expect = 0.042, Method: Composition-based stats. Identities = 14/104 (13%), Positives = 32/104 (30%), Gaps = 5/104 (4%) Query: 1 MKSLSYKRIYKSQEYLATLGTIEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYC 60 MK + + + + L + ++ + +FG Y ++ + V L R Sbjct: 1 MKYETA-LVERIRSLLDSDFEMQEKEMFGGYCFLLNRHMCIGVIGNSLLTRIGPDHYSKS 59 Query: 61 VKHP-PVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYSL 103 + Y + + V+ L +L + L Sbjct: 60 LAQNYVKQFDYAGRPMADVV---CVEAELIETNEELESWLEKGL 100 >UniRef50_Q21YH8 Putative uncharacterized protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21YH8_RHOFD Length = 96 Score = 39.9 bits (92), Expect = 0.049, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 1/65 (1%) Query: 110 KSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLR-QQNSLVTEKIL 168 + + RL+DLPN+ + L VGI + L + L +L Sbjct: 3 RVSDKRPCRLEDLPNIGKAIAGDLRSVGILNPEQLAEHEPLETFQALEPVMGHRHDPCVL 62 Query: 169 FMLEG 173 + L Sbjct: 63 YALMA 67 >UniRef50_A4ASY1 Putative uncharacterized protein n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ASY1_9FLAO Length = 114 Score = 39.9 bits (92), Expect = 0.058, Method: Composition-based stats. Identities = 11/91 (12%), Positives = 30/91 (32%), Gaps = 2/91 (2%) Query: 22 IEYRSLFGSYSLTVDDTVFAMVSDGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNY 81 + + +FG ++ + + +L +R E + +K V Y Sbjct: 26 LSKKKMFGGLAIMYKGKMTVGIVKNDLMVRVVEGKMKDILKMDSVRPMDFTNRPLKEFIY 85 Query: 82 YRVDESLWRNQLKLVRLSKYSLDAALKEKST 112 V ++ + +L + ++ A + Sbjct: 86 --VSSDGFKTEEELQNWIELGIEHAQNKLKQ 114 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.147 0.394 Lambda K H 0.267 0.0450 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,176,416,167 Number of Sequences: 3077464 Number of extensions: 43025963 Number of successful extensions: 125878 Number of sequences better than 1.0e-01: 169 Number of HSP's better than 0.1 without gapping: 299 Number of HSP's successfully gapped in prelim test: 48 Number of HSP's that attempted gapping in prelim test: 125375 Number of HSP's gapped (non-prelim): 354 length of query: 209 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 86 effective length of database: 661,868,284 effective search space: 56920672424 effective search space used: 56920672424 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 90 (39.1 bits)