303 c1vmaA_ Probab=97.47   E-value=0.0011  Score=43.32  Aligned_columns=122  Identities=23%

Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCHH---------HHHCCCEEEEEEEEEE------------
Q ss_conf             3899983788998888989999819745455302355238788---------9860930888699998------------
Q batch____         6 RNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMDSNDL---------EKERGITILAKNTAIK------------   64 (607)
Q Consensus         6 RNIaIigHvD~GKTTL~e~LL~~sg~i~~~g~v~~~~~D~~~~---------EreRGITI~s~~~~~~------------   64 (607)
                      +-|+++|..++||||.+-.|....  ......+.--.+|....         -+.-|+.+......-+            
T Consensus        93 ~vi~~~Gp~G~GKTTt~aklA~~~--~~~g~~v~li~~D~~R~gA~eQL~~~a~~~~v~~~~~~~~~~~~~~~~~~~~~~  170 (294)
T c1vmaA_          93 FVIMVVGVNGTGKTTSCGKLAKMF--VDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDAVAHA  170 (294)
T ss_dssp             EEEEEECCTTSSHHHHHHHHHHHH--HHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHHHHHH
T ss_pred             EEEEEEECCCCCHHHHHHHHHHHH--HHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf             699998068876024899999999--967994899975876864799999999761982897488369899999999999


Q ss_pred             -ECCEEEEEEECCCHHHHHHHHHHHHHHC------------CEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf             -5894999981787367899899998850------------789999987878856889999999972997799995347
Q batch____        65 -WNDYRINIVDTPGHADFGGEVERVMSMV------------DSVLLVVDAFDGPMPQTRFVTKKAFAYGLKPIVVINKVD  131 (607)
Q Consensus        65 -~~~~~iNlIDTPGH~DF~~Ev~ral~~~------------DgAiLVVDA~eGv~~qT~~vl~~a~~~glp~IvvINKiD  131 (607)
                       .+++.+-||||||-.-+-......|...            |-.+||+||..| +..-...+......++-. ++++|+|
T Consensus       171 ~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~-~~~~~~~~~~~~~~~~~~-iIlTKlD  248 (294)
T c1vmaA_         171 LARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTG-QNGLVQAKIFKEAVNVTG-IILTKLD  248 (294)
T ss_dssp             HHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGH-HHHHHHHHHHHHHSCCCE-EEEECGG
T ss_pred             HHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC-HHHHHHHHHHHHCCCCCE-EEEECCC
T ss_conf             97799899981888987857999999999999630356688539998114687-899999999963089976-9997444