300 c1tndA_ Probab=97.51   E-value=0.003  Score=40.59  Aligned_columns=138  Identities=16%

Q ss_pred             HHHHHCCCEEEEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEECCC-----------CCCHHHHHHHHH
Q ss_conf             889860930888699998589499998178736789989999885078999998787-----------885688999999
Q batch____        47 DLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAFD-----------GPMPQTRFVTKK  115 (607)
Q Consensus        47 ~~EreRGITI~s~~~~~~~~~~~iNlIDTPGH~DF~~Ev~ral~~~DgAiLVVDA~e-----------Gv~~qT~~vl~~  115 (607)
                      +.=+-|.-|.......|.+++..+.++|+.|....-.-=.....-+++.+.|||..+           .-+..+...|+.
T Consensus       143 Dil~~r~~T~Gi~~~~f~~~~~~~~~~DvgGq~~~R~kW~~~f~~v~~iifvv~lsd~d~~~~e~~~~nrl~esl~~f~~  222 (323)
T c1tndA_         143 DVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCIIFIAALSAYDMVLVEDDEVNRMHESLHLFNS  222 (323)
T ss_dssp             HHHHCCCCCCSEEEEEEEETTEEEEEEEECCSHHHHGGGGGGCTTCSEEEEEEEGGGGGCBCSSCTTSBHHHHHHHHHHH
T ss_pred             CEEEEECCCCCEEEEEEEECCEEEEEEECCCCCCCCHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             45898535024179999735704889977898743323688736998899997811414422256740358999999999


Q ss_pred             HHHCC----CCEEEEEECCCC------------------CCCCHHHHHHHHHHHHHHCCCCCHHCCEEEEEEECCCCCCC
Q ss_conf             99729----977999953478------------------76788999999999998617871003420788202268444
Q batch____       116 AFAYG----LKPIVVINKVDR------------------PGARPDWVVDQVFDLFVNLDATDEQLDFPIVYASALNGIAG  173 (607)
Q Consensus       116 a~~~g----lp~IvvINKiDr------------------~~a~~~~v~~ei~~l~~~l~~~de~l~~pVl~~SA~~G~~~  173 (607)
                      .....    .|.++++||+|.                  -..+++.+.+-+.+.|.++......-.+-+.+++|..    
T Consensus       223 i~~~~~~~~~~iil~lNK~Dif~~Kl~~~~l~~~fp~y~g~~~~~~~~~~i~~~F~~~~~~~~~r~~~~~~t~a~d----  298 (323)
T c1tndA_         223 ICNHRYFATTSIVLFLNKKDVFSEKIKKAHLSICFPDYNGPNTYEDAGNYIKVQFLELNMRRDVKEIYSHMTCATD----  298 (323)
T ss_dssp             HHTCSGGGSCEEEEEEECHHHHHHHHTTSCGGGTCTTCCSCCCHHHHHHHHHHHHHTTCTTBTTBCCEEEEECTTC----
T ss_pred             HHCCHHHCCCCEEEEECCHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE----
T ss_conf             8279687799789993255899876044883440678899789899999999999985237789738999985110----


Q ss_pred             CCHHHHHCCHHHHHHHHHHHC
Q ss_conf             553553201022488898515
Q batch____       174 LDHEDMAEDMTPLYQAIVDHV  194 (607)
Q Consensus       174 ~~~~~~~~~~~~Lld~i~~~~  194 (607)
                            ..++...++.+.+.+
T Consensus       299 ------~~~i~~v~~~v~~~i  313 (323)
T c1tndA_         299 ------TQNVKFVFDAVTDII  313 (323)
T ss_dssp             ------HHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHHHHHHH
T ss_conf             ------689999999999999