BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (138 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76546 Uncharacterized protein yffO n=3 Tax=Escherichia... 286 1e-76 UniRef50_C4TIH8 Predicted protein n=1 Tax=Escherichia coli O157:... 91 2e-17 UniRef50_A7MK07 Putative uncharacterized protein n=1 Tax=Cronoba... 55 5e-07 UniRef50_C9XYG4 Putative uncharacterized protein n=1 Tax=Cronoba... 55 1e-06 UniRef50_A3L628 Putative uncharacterized protein n=1 Tax=Pseudom... 51 1e-05 UniRef50_B7LBM5 Putative terminase small subunit n=4 Tax=Proteob... 51 1e-05 UniRef50_A9BYN8 Putative terminase small subunit protein n=1 Tax... 47 2e-04 UniRef50_Q716H4 Gene 1 protein n=8 Tax=root RepID=Q716H4_BPSFV 43 0.003 UniRef50_D1E3N9 Terminase small subunit n=10 Tax=Neisseria gonor... 42 0.005 UniRef50_C4XUL8 Putative uncharacterized protein n=1 Tax=Desulfo... 41 0.011 UniRef50_B8FNG7 Putative uncharacterized protein n=1 Tax=Desulfa... 39 0.071 >UniRef50_P76546 Uncharacterized protein yffO n=3 Tax=Escherichia coli K-12 RepID=YFFO_ECOLI Length = 138 Score = 286 bits (732), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 138/138 (100%), Positives = 138/138 (100%) Query: 1 MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHR 60 MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHR Sbjct: 1 MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHR 60 Query: 61 QMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALL 120 QMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALL Sbjct: 61 QMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALL 120 Query: 121 AAAKLNSLKHSPFGDDKQ 138 AAAKLNSLKHSPFGDDKQ Sbjct: 121 AAAKLNSLKHSPFGDDKQ 138 >UniRef50_C4TIH8 Predicted protein n=1 Tax=Escherichia coli O157:H7 RepID=C4TIH8_ECO57 Length = 140 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/118 (42%), Positives = 68/118 (57%) Query: 15 DTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFRE 74 D S + + GR KYN++IA QI L V+ SLR+IS PGMP + W L+H + R+ Sbjct: 13 DLSPSKRSAGRKTKYNDRIAEQICLYVARNMSLREISRQPGMPHWDTLKIWMLQHPELRQ 72 Query: 75 GIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSP 132 I + WL E A+E EV+ N+ED P QL A+A+A LL AA+L L+ P Sbjct: 73 TIEAIRWLNGTEFIAEAMECYAEVETNSEDFPAQLALAKARAATLLGAARLMELRKPP 130 >UniRef50_A7MK07 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MK07_ENTS8 Length = 150 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 25/62 (40%), Positives = 37/62 (59%) Query: 16 TSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREG 75 T T K GRP+ Y ++A I L+++G SLRK+ PGMP+ + RW +H +FR+ Sbjct: 2 TMATESKTGRPSDYLPEVAADICSLLADGESLRKVCERPGMPNKSTVFRWLAQHEEFRDQ 61 Query: 76 IA 77 A Sbjct: 62 YA 63 >UniRef50_C9XYG4 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XYG4_CROTZ Length = 164 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 37/59 (62%) Query: 19 TPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIA 77 T K GRP++Y ++A I L+++G SLRK+ PGMP+ + RW +H +FR+ A Sbjct: 3 TESKTGRPSEYLPEVAAGICSLLADGESLRKVCDRPGMPNKSTVFRWLAQHEEFRDQYA 61 >UniRef50_A3L628 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 2192 RepID=A3L628_PSEAE Length = 188 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 5/83 (6%) Query: 24 GRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRW--QLEHMDFREGIAWMSW 81 GRP++Y + + ++EG SLRK+ +PGMP+ +RW +H D RE A Sbjct: 37 GRPSRYTPTVGLAVCTALAEGMSLRKVCQLPGMPAMSTFLRWLADEQHADLREQYARARE 96 Query: 82 LWCAEAGRRAVEIIDEVDINAED 104 A+A A EI+ D + D Sbjct: 97 ---AQADTLAEEILQIADDGSND 116 >UniRef50_B7LBM5 Putative terminase small subunit n=4 Tax=Proteobacteria RepID=B7LBM5_ECO55 Length = 141 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 33/57 (57%) Query: 21 KKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIA 77 K GRP+ Y ++A I L++ G SL K+ PGMP+ + RW EH +FR+ A Sbjct: 6 KNVGRPSDYLPEVADDICALLASGESLVKVCKRPGMPAKATVFRWLSEHDEFRDKYA 62 >UniRef50_A9BYN8 Putative terminase small subunit protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BYN8_DELAS Length = 157 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 2/56 (3%) Query: 24 GRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRW--QLEHMDFREGIA 77 GR + +NE IAT++ ++ G SLRKI P MPS +MRW + E+ FRE A Sbjct: 2 GRISTFNEDIATKLCDRIAAGESLRKICTDPKMPSMATVMRWLGKPENAAFREQYA 57 >UniRef50_Q716H4 Gene 1 protein n=8 Tax=root RepID=Q716H4_BPSFV Length = 140 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 33/59 (55%) Query: 19 TPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIA 77 T K GRP+ Y ++A I L+S G SL K+ PGMP + RW +H DFR+ A Sbjct: 3 TEPKAGRPSDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKYA 61 >UniRef50_D1E3N9 Terminase small subunit n=10 Tax=Neisseria gonorrhoeae RepID=D1E3N9_NEIGO Length = 149 Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 10/121 (8%) Query: 17 SETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGI 76 S T +K GRP Y + +A +I ++ G SLR I G+P + + RW + +FR Sbjct: 2 SGTKRKLGRPTDYTKDMADKICEKIANGRSLRSICAEDGVPPMKTIYRWLEANEEFRHQY 61 Query: 77 AWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSP--FG 134 A A + + E I D + A +KAK + A K + K +P +G Sbjct: 62 --------ARAREKQADYFAEEIIEIADSAQAESAAVSKAKLQIDARKWAASKIAPKKYG 113 Query: 135 D 135 D Sbjct: 114 D 114 >UniRef50_C4XUL8 Putative uncharacterized protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XUL8_DESMR Length = 162 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 18/57 (31%), Positives = 29/57 (50%) Query: 21 KKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIA 77 K GRP +++++A + + EG LR I PGMP + W ++ F+E A Sbjct: 12 KVAGRPCSFSQEVADAVCQGIMEGRGLRSICADPGMPGPATVYSWLTKYASFQEQYA 68 >UniRef50_B8FNG7 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FNG7_DESAA Length = 196 Score = 38.5 bits (88), Expect = 0.071, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 16/116 (13%) Query: 24 GRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRW--QLEHMDFREGIAWMSW 81 GRP+ Y ++IA I ++ G S++ I+ MPS + RW + FRE Sbjct: 4 GRPSAYTDEIAETICERIASGESVQSITSDEDMPSSAMVYRWLADARYSKFRE------- 56 Query: 82 LWCAEAGRRAVEIIDEVDI--NAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 ++ R+A DE+ + ED PK KA + +A AA + LK +GD Sbjct: 57 MYTRARERQADFFADEIITIADTEDNPK---KAAVRVQARQWAA--SKLKPRKYGD 107 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76546 Uncharacterized protein yffO n=3 Tax=Escherichia... 225 3e-58 UniRef50_C4TIH8 Predicted protein n=1 Tax=Escherichia coli O157:... 176 3e-43 UniRef50_A7MK07 Putative uncharacterized protein n=1 Tax=Cronoba... 116 3e-25 UniRef50_C9XYG4 Putative uncharacterized protein n=1 Tax=Cronoba... 114 1e-24 UniRef50_A3L628 Putative uncharacterized protein n=1 Tax=Pseudom... 111 1e-23 UniRef50_B7LBM5 Putative terminase small subunit n=4 Tax=Proteob... 109 4e-23 UniRef50_A9BYN8 Putative terminase small subunit protein n=1 Tax... 93 4e-18 Sequences not found previously or not previously below threshold: UniRef50_Q716H4 Gene 1 protein n=8 Tax=root RepID=Q716H4_BPSFV 93 2e-18 UniRef50_D1E3N9 Terminase small subunit n=10 Tax=Neisseria gonor... 82 4e-15 UniRef50_Q1MCA2 Putative phage-related protein n=8 Tax=Rhizobium... 76 3e-13 UniRef50_C4XUL8 Putative uncharacterized protein n=1 Tax=Desulfo... 73 3e-12 UniRef50_B8FNG7 Putative uncharacterized protein n=1 Tax=Desulfa... 71 2e-11 UniRef50_C6N2C3 Putative uncharacterized protein n=1 Tax=Legione... 67 2e-10 UniRef50_Q775B8 Bbp26 n=2 Tax=root RepID=Q775B8_9CAUD 67 2e-10 UniRef50_C6N1Z4 Putative phage associated protein n=2 Tax=Legion... 65 7e-10 UniRef50_C6E2C0 Putative uncharacterized protein n=1 Tax=Geobact... 62 6e-09 UniRef50_A1B8H7 Putative uncharacterized protein n=1 Tax=Paracoc... 60 3e-08 UniRef50_B4RHH7 Putative uncharacterized protein n=1 Tax=Phenylo... 58 7e-08 UniRef50_Q2G3Y3 Putative uncharacterized protein n=1 Tax=Novosph... 57 2e-07 UniRef50_A3NLX8 Putative uncharacterized protein n=1 Tax=Burkhol... 53 3e-06 UniRef50_B4R870 Putative uncharacterized protein n=1 Tax=Phenylo... 52 4e-06 UniRef50_B4RAH1 Putative uncharacterized protein n=1 Tax=Phenylo... 51 1e-05 UniRef50_B4RF19 Putative uncharacterized protein n=1 Tax=Phenylo... 45 8e-04 UniRef50_C6XH08 Putative uncharacterized protein n=1 Tax=Candida... 42 0.004 UniRef50_B4RDX8 Putative uncharacterized protein n=1 Tax=Phenylo... 42 0.006 UniRef50_Q5G7R2 Putative terminase small subunit n=1 Tax=Listone... 42 0.008 UniRef50_UPI0001B4AAA6 hypothetical protein Bfra3_11766 n=1 Tax=... 42 0.008 UniRef50_B5IHK5 Resolvase, N terminal domain superfamily n=1 Tax... 39 0.062 UniRef50_Q72BB1 Putative uncharacterized protein n=2 Tax=Desulfo... 39 0.070 >UniRef50_P76546 Uncharacterized protein yffO n=3 Tax=Escherichia coli K-12 RepID=YFFO_ECOLI Length = 138 Score = 225 bits (574), Expect = 3e-58, Method: Composition-based stats. Identities = 138/138 (100%), Positives = 138/138 (100%) Query: 1 MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHR 60 MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHR Sbjct: 1 MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHR 60 Query: 61 QMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALL 120 QMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALL Sbjct: 61 QMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALL 120 Query: 121 AAAKLNSLKHSPFGDDKQ 138 AAAKLNSLKHSPFGDDKQ Sbjct: 121 AAAKLNSLKHSPFGDDKQ 138 >UniRef50_C4TIH8 Predicted protein n=1 Tax=Escherichia coli O157:H7 RepID=C4TIH8_ECO57 Length = 140 Score = 176 bits (445), Expect = 3e-43, Method: Composition-based stats. Identities = 50/118 (42%), Positives = 68/118 (57%) Query: 15 DTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFRE 74 D S + + GR KYN++IA QI L V+ SLR+IS PGMP + W L+H + R+ Sbjct: 13 DLSPSKRSAGRKTKYNDRIAEQICLYVARNMSLREISRQPGMPHWDTLKIWMLQHPELRQ 72 Query: 75 GIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSP 132 I + WL E A+E EV+ N+ED P QL A+A+A LL AA+L L+ P Sbjct: 73 TIEAIRWLNGTEFIAEAMECYAEVETNSEDFPAQLALAKARAATLLGAARLMELRKPP 130 >UniRef50_A7MK07 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MK07_ENTS8 Length = 150 Score = 116 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 6/120 (5%) Query: 16 TSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREG 75 T T K GRP+ Y ++A I L+++G SLRK+ PGMP+ + RW +H +FR+ Sbjct: 2 TMATESKTGRPSDYLPEVAADICSLLADGESLRKVCERPGMPNKSTVFRWLAQHEEFRDQ 61 Query: 76 IAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 A + A E+ D D AE+ + KA + A + K +GD Sbjct: 62 YAKATE---TRADAIFEEMFDIADTVAEEA-AAVGKARLRIDTRKWALARMNPKK--YGD 115 >UniRef50_C9XYG4 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XYG4_CROTZ Length = 164 Score = 114 bits (284), Expect = 1e-24, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 6/119 (5%) Query: 17 SETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGI 76 T K GRP++Y ++A I L+++G SLRK+ PGMP+ + RW +H +FR+ Sbjct: 1 MATESKTGRPSEYLPEVAAGICSLLADGESLRKVCDRPGMPNKSTVFRWLAQHEEFRDQY 60 Query: 77 AWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 A + A E+ D D AE+ + KA + A + K +GD Sbjct: 61 AKATE---TRADAIFEEMFDIADTVAEEA-AAVGKARLRIDTRKWALARMNPKK--YGD 113 >UniRef50_A3L628 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 2192 RepID=A3L628_PSEAE Length = 188 Score = 111 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 5/90 (5%) Query: 17 SETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQL--EHMDFRE 74 + + GRP++Y + + ++EG SLRK+ +PGMP+ +RW +H D RE Sbjct: 30 TAAKRPPGRPSRYTPTVGLAVCTALAEGMSLRKVCQLPGMPAMSTFLRWLADEQHADLRE 89 Query: 75 GIAWMSWLWCAEAGRRAVEIIDEVDINAED 104 A A+A A EI+ D + D Sbjct: 90 QYARARE---AQADTLAEEILQIADDGSND 116 >UniRef50_B7LBM5 Putative terminase small subunit n=4 Tax=Proteobacteria RepID=B7LBM5_ECO55 Length = 141 Score = 109 bits (271), Expect = 4e-23, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 6/116 (5%) Query: 20 PKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWM 79 K GRP+ Y ++A I L++ G SL K+ PGMP+ + RW EH +FR+ A Sbjct: 5 KKNVGRPSDYLPEVADDICALLASGESLVKVCKRPGMPAKATVFRWLSEHDEFRDKYAKA 64 Query: 80 SWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 + A A EI + D D ++ KA + A + + +GD Sbjct: 65 TE---ARADSIFEEIFEIADTAIPDA-AEVAKARLRVDTRKWALARMNPRK--YGD 114 >UniRef50_Q716H4 Gene 1 protein n=8 Tax=root RepID=Q716H4_BPSFV Length = 140 Score = 93.3 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 6/119 (5%) Query: 17 SETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGI 76 T K GRP+ Y ++A I L+S G SL K+ PGMP + RW +H DFR+ Sbjct: 1 MATEPKAGRPSDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKY 60 Query: 77 AWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 A + A A EI + D D ++ KA + A + + +GD Sbjct: 61 AKATE---ARADSIFEEIFEIADNAIPDA-AEVAKARLRVDTRKWALARMNPRK--YGD 113 >UniRef50_A9BYN8 Putative terminase small subunit protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BYN8_DELAS Length = 157 Score = 92.5 bits (228), Expect = 4e-18, Method: Composition-based stats. Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 5/78 (6%) Query: 24 GRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQ--LEHMDFREGIAWMSW 81 GR + +NE IAT++ ++ G SLRKI P MPS +MRW E+ FRE A Sbjct: 2 GRISTFNEDIATKLCDRIAAGESLRKICTDPKMPSMATVMRWLGKPENAAFREQYACARD 61 Query: 82 LWCAEAGRRAVEIIDEVD 99 A+A + E+++ D Sbjct: 62 ---AQADKLVEEMLEIAD 76 >UniRef50_D1E3N9 Terminase small subunit n=10 Tax=Neisseria gonorrhoeae RepID=D1E3N9_NEIGO Length = 149 Score = 82.5 bits (202), Expect = 4e-15, Method: Composition-based stats. Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 10/125 (8%) Query: 16 TSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREG 75 S T +K GRP Y + +A +I ++ G SLR I G+P + + RW + +FR Sbjct: 1 MSGTKRKLGRPTDYTKDMADKICEKIANGRSLRSICAEDGVPPMKTIYRWLEANEEFRHQ 60 Query: 76 IAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSP--F 133 A +A A EII+ D + A +KAK + A K + K +P + Sbjct: 61 YARARE---KQADYFAEEIIEIADSAQAE-----SAAVSKAKLQIDARKWAASKIAPKKY 112 Query: 134 GDDKQ 138 GD + Sbjct: 113 GDKSE 117 >UniRef50_Q1MCA2 Putative phage-related protein n=8 Tax=Rhizobium RepID=Q1MCA2_RHIL3 Length = 157 Score = 75.9 bits (185), Expect = 3e-13, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 5/84 (5%) Query: 23 RGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHM--DFREGIAWMS 80 GRP K+ +A I +++G SLR I MP+ ++ W + FR A Sbjct: 2 TGRPTKFTTALADIICERIADGESLRSICRDDAMPAKSTVLAWLADDDKTAFRTKYAQAR 61 Query: 81 WLWCAEAGRRAVEIIDEVDINAED 104 + +A E+++ D D Sbjct: 62 EI---QADGFVDEMVEIADDGTND 82 >UniRef50_C4XUL8 Putative uncharacterized protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XUL8_DESMR Length = 162 Score = 73.3 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 10/117 (8%) Query: 19 TPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAW 78 K GRP +++++A + + EG LR I PGMP + W ++ F+E A Sbjct: 10 AKKVAGRPCSFSQEVADAVCQGIMEGRGLRSICADPGMPGPATVYSWLTKYASFQEQYAL 69 Query: 79 MSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 + +A E++ D + Q+ + A+ A+ L+ +GD Sbjct: 70 AREV---QADVYFDEVVSIAD---NEPDPQIARNRIDARKWAAS----KLRPKRYGD 116 >UniRef50_B8FNG7 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FNG7_DESAA Length = 196 Score = 70.6 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 12/115 (10%) Query: 23 RGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLE--HMDFREGIAWMS 80 GRP+ Y ++IA I ++ G S++ I+ MPS + RW + + FRE Sbjct: 3 AGRPSAYTDEIAETICERIASGESVQSITSDEDMPSSAMVYRWLADARYSKFREMYTRAR 62 Query: 81 WLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 +A A EII D ED PK KA + +A AA + LK +GD Sbjct: 63 ER---QADFFADEIITIADT--EDNPK---KAAVRVQARQWAA--SKLKPRKYGD 107 >UniRef50_C6N2C3 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N2C3_9GAMM Length = 171 Score = 67.1 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 5/92 (5%) Query: 15 DTSETPKKRGRPAKYNEKIATQIVLLVSEG-YSLRKISM-MPGMPSHRQMMRWQLEHMDF 72 + K GRP Y +A +I ++ ++ + P P+ + W E+ DF Sbjct: 22 EMKALKSKNGRPTTYTLALAKEICDAIASSSKGIKALCQGHPHWPNKDTIFTWLKENQDF 81 Query: 73 REGIAWMSWLWCAEAGRRAVEIIDEVDINAED 104 + A A+ E+++ D +++D Sbjct: 82 SDQYARAKQ---AQIECVVDELLEIADDSSQD 110 >UniRef50_Q775B8 Bbp26 n=2 Tax=root RepID=Q775B8_9CAUD Length = 194 Score = 67.1 bits (162), Expect = 2e-10, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Query: 27 AKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAE 86 + Y E IAT+I +++G LR+I MP+ R + W +F E + A Sbjct: 26 STYTEAIATEICDRIADGEPLRQICRDEHMPAWRTVYHWIEARPEFAERMERAR---RAG 82 Query: 87 AGRRAVEIIDEVDI 100 A E ++ + Sbjct: 83 FDAIAEEALEIANT 96 >UniRef50_C6N1Z4 Putative phage associated protein n=2 Tax=Legionella drancourtii LLAP12 RepID=C6N1Z4_9GAMM Length = 157 Score = 65.2 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 5/91 (5%) Query: 16 TSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGM--PSHRQMMRWQLEHMDFR 73 ++T K GRP KYN ++A +I +++ K+ M P + W ++ +F Sbjct: 1 MAKTSSKIGRPTKYNSELAEEICNVIASTSKGTKVLCKENMHWPCQDTLFAWLKKYPEFS 60 Query: 74 EGIAWMSWLWCAEAGRRAVEIIDEVDINAED 104 E A + EI++ D + D Sbjct: 61 EQYAQAK---ICQIELLIDEILEIADDESND 88 >UniRef50_C6E2C0 Putative uncharacterized protein n=1 Tax=Geobacter sp. M21 RepID=C6E2C0_GEOSM Length = 191 Score = 62.1 bits (149), Expect = 6e-09, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%) Query: 21 KKRGRPAKYNEKIATQIVLLVSE-GYSLRKIS-MMPGMPSHRQMMRWQLEHMDFREGIAW 78 KK+GRP Y +IA +I ++ SL+++ PSHR ++RW E+ DF Sbjct: 18 KKQGRPTLYTAEIAEEICYRIATTAKSLKRVCDEDERFPSHRTVLRWVQENSDFCHQYRI 77 Query: 79 MSWLWCAEAGRRAVEIIDEVDINAED 104 + A E ++ +D ++ D Sbjct: 78 ARE---EQGNFLAFEGLEIIDDSSLD 100 >UniRef50_A1B8H7 Putative uncharacterized protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B8H7_PARDP Length = 133 Score = 59.8 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 7/83 (8%) Query: 17 SETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGI 76 + A Y + I ++ G SL K+ GMP + ++RW + DFR Sbjct: 1 MPIKRDAETIAGYKD----AICEAIACGDSLAKVLRKKGMPGYSTVIRWLRDDEDFRVDY 56 Query: 77 AWMSWLWCAEAGRRAVEIIDEVD 99 A A+A A +I D VD Sbjct: 57 ARARE---AQADADADKIGDIVD 76 >UniRef50_B4RHH7 Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RHH7_PHEZH Length = 221 Score = 58.2 bits (139), Expect = 7e-08, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 15/109 (13%) Query: 21 KKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMS 80 GRP Y + A I + + G +L I P MP+ + W F E Sbjct: 22 SAIGRPCGYCRETAEAIFVRLCGGEALSAICRDPQMPAASTVYAWLAREPQFAEAYRLAR 81 Query: 81 WLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLK 129 + +A A E +L KA A LA +L L+ Sbjct: 82 EV---QADALAAEGW------------ELAKAATPDTAFLAKVRLEHLR 115 >UniRef50_Q2G3Y3 Putative uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G3Y3_NOVAD Length = 144 Score = 57.1 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 4/88 (4%) Query: 24 GRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLW 83 GRP+ +++ +I+ +S G L +I +PS R ++RW+ E FR A Sbjct: 2 GRPSLKTDEVVEEIIERLSHGEPLARICRDAHLPSFRTVLRWEEEDEAFRHLSARARSYG 61 Query: 84 CAEAGRRAVEIIDEVDINAEDGPKQLRK 111 A + +D D N E P R Sbjct: 62 ---TDYIADDCMDIAD-NPEIEPADKRI 85 >UniRef50_A3NLX8 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei 668 RepID=A3NLX8_BURP6 Length = 147 Score = 52.8 bits (125), Expect = 3e-06, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 26/49 (53%) Query: 28 KYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGI 76 ++++ + +I L+ +G S+R++ PGMP ++W + ++ Sbjct: 17 EFSQALFDRICALIGDGKSVREVCKGPGMPDRMTFLKWAKRTPELQKQY 65 >UniRef50_B4R870 Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4R870_PHEZH Length = 265 Score = 52.5 bits (124), Expect = 4e-06, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 39/97 (40%), Gaps = 4/97 (4%) Query: 26 PAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCA 85 P+ Y I ++ G ++ I+ P MPS + + RW +F +A Sbjct: 153 PSSYTRAAGEAICARLARGEAMSAINADPAMPSSKVVYRWLRTEPEFARMVAEAR---AQ 209 Query: 86 EAGRRAVEIIDEVDINAEDGPKQ-LRKAEAKAKALLA 121 + ++I D+ + ++ L +A+A+ L Sbjct: 210 QRRALKLKIHLASDLPIQGTTREMLARAKARVARLEG 246 Score = 43.6 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 26/56 (46%) Query: 25 RPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMS 80 R +E +I+ ++ G ++++I+ P MPS+ + W +F E + Sbjct: 59 RETSCHEATCREILRRMARGMTIKEITADPDMPSYATLFHWVRTFAEFGEAYRALR 114 >UniRef50_B4RAH1 Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RAH1_PHEZH Length = 289 Score = 50.9 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 26/67 (38%) Query: 35 TQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEI 94 +I+ ++ G SL ++ P MP H + RW E FR+ A I Sbjct: 94 DEILRRIAAGRSLVEVCEAPEMPHHTSVTRWLDEKPGFRDRYLDARLAQADGLFDLAWRI 153 Query: 95 IDEVDIN 101 E D + Sbjct: 154 AREADED 160 Score = 41.3 bits (95), Expect = 0.009, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 24/65 (36%) Query: 16 TSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREG 75 T+ + RGR Q+ + G SL + P +P Q+ RW+ F E Sbjct: 7 TAASKDARGRQFARRLAAVQQVCERLEAGESLCGVCRDPLLPQRYQLDRWRAAEPLFDEM 66 Query: 76 IAWMS 80 + Sbjct: 67 VREAR 71 >UniRef50_B4RF19 Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RF19_PHEZH Length = 247 Score = 45.1 bits (105), Expect = 8e-04, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 23/65 (35%) Query: 23 RGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWL 82 G Y +A +I + G SL I MP++ + W+ + +F E + Sbjct: 33 TGGMTTYCPVVANEIYTRLCAGESLSAICRDRDMPANSTVNLWRRDVPEFAEAMRMARQA 92 Query: 83 WCAEA 87 Sbjct: 93 QAEAF 97 >UniRef50_C6XH08 Putative uncharacterized protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XH08_LIBAP Length = 185 Score = 42.4 bits (98), Expect = 0.004, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%) Query: 29 YNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWM 79 Y+ ++ I+ V+ G +L + GMP + RW + + +E Sbjct: 21 YSPELFAGILDQVANGKALGHVLRKVGMPKYSTFYRWIKKDLKLQEAYTEA 71 >UniRef50_B4RDX8 Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RDX8_PHEZH Length = 266 Score = 42.1 bits (97), Expect = 0.006, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%) Query: 23 RGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFRE 74 R R ++ +A ++ +S G +L + P MPS R++ W+ F E Sbjct: 29 RTRRDAFDPAVAKALLDRLSAGEALAAVVRDPAMPSWRRLRLWRATAPGFAE 80 Score = 41.7 bits (96), Expect = 0.007, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 31/66 (46%) Query: 29 YNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEAG 88 ++E + ++ + EG+S +S +PGMP + + +W DF +A Sbjct: 169 FSEDLQEAVLARIVEGHSFNSLSRLPGMPCRKTLGKWVRTRPDFAREVAQACEDREDIFA 228 Query: 89 RRAVEI 94 +A+EI Sbjct: 229 DQALEI 234 >UniRef50_Q5G7R2 Putative terminase small subunit n=1 Tax=Listonella phage phiHSIC RepID=Q5G7R2_9CAUD Length = 147 Score = 41.7 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 24/61 (39%) Query: 19 TPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAW 78 + K G P KY + ++ + EG S + G S + + W+ H DF + Sbjct: 16 SETKMGAPTKYKPEYCELLMDMAKEGASFTEFRAAIGAVSRQTLHNWKEAHPDFLDAYTR 75 Query: 79 M 79 Sbjct: 76 A 76 >UniRef50_UPI0001B4AAA6 hypothetical protein Bfra3_11766 n=1 Tax=Bacteroides fragilis 3_1_12 RepID=UPI0001B4AAA6 Length = 176 Score = 41.7 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 2/70 (2%) Query: 27 AKYNEKIATQIVLLV-SEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCA 85 AKYN KI I L+ ++ Y++ ++ + G+ S W+ +F E I Sbjct: 2 AKYNTKIVETICSLIRADSYTIAEVCRLSGI-SESTFHEWKASKPEFSECIKKAEAARME 60 Query: 86 EAGRRAVEII 95 A + + Sbjct: 61 FFVTEAKKSL 70 >UniRef50_B5IHK5 Resolvase, N terminal domain superfamily n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IHK5_9EURY Length = 196 Score = 38.6 bits (88), Expect = 0.062, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 26/42 (61%) Query: 21 KKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQM 62 K+ GRP KY++++A ++ L +GYS ++I G+P + Sbjct: 148 KRIGRPPKYSDEVAKKVKKLHQKGYSRKEICEELGLPESAVI 189 >UniRef50_Q72BB1 Putative uncharacterized protein n=2 Tax=Desulfovibrio vulgaris RepID=Q72BB1_DESVH Length = 202 Score = 38.6 bits (88), Expect = 0.070, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%) Query: 22 KRGRPAKYNEKIATQIVLLVS-EGYSLRKISMMPGMPSHRQMMRWQLEHMDFRE 74 +RGRP++YN A Q ++ G + R+++ + G+ + RW+ EH +F E Sbjct: 26 RRGRPSRYNAAYAMQAREAIAMSGMTDRQLARLFGVDG-STLTRWRKEHPEFAE 78 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76546 Uncharacterized protein yffO n=3 Tax=Escherichia... 181 8e-45 UniRef50_B7LBM5 Putative terminase small subunit n=4 Tax=Proteob... 143 1e-33 UniRef50_A7MK07 Putative uncharacterized protein n=1 Tax=Cronoba... 142 3e-33 UniRef50_C4TIH8 Predicted protein n=1 Tax=Escherichia coli O157:... 141 7e-33 UniRef50_C9XYG4 Putative uncharacterized protein n=1 Tax=Cronoba... 141 7e-33 UniRef50_C4XUL8 Putative uncharacterized protein n=1 Tax=Desulfo... 130 2e-29 UniRef50_Q716H4 Gene 1 protein n=8 Tax=root RepID=Q716H4_BPSFV 128 6e-29 UniRef50_D1E3N9 Terminase small subunit n=10 Tax=Neisseria gonor... 126 3e-28 UniRef50_A3L628 Putative uncharacterized protein n=1 Tax=Pseudom... 124 1e-27 UniRef50_C6N2C3 Putative uncharacterized protein n=1 Tax=Legione... 120 2e-26 UniRef50_B8FNG7 Putative uncharacterized protein n=1 Tax=Desulfa... 117 9e-26 UniRef50_C6N1Z4 Putative phage associated protein n=2 Tax=Legion... 116 2e-25 UniRef50_A9BYN8 Putative terminase small subunit protein n=1 Tax... 113 1e-24 UniRef50_Q1MCA2 Putative phage-related protein n=8 Tax=Rhizobium... 113 2e-24 UniRef50_C6E2C0 Putative uncharacterized protein n=1 Tax=Geobact... 106 3e-22 UniRef50_B4RHH7 Putative uncharacterized protein n=1 Tax=Phenylo... 98 6e-20 UniRef50_Q775B8 Bbp26 n=2 Tax=root RepID=Q775B8_9CAUD 98 8e-20 UniRef50_B4R870 Putative uncharacterized protein n=1 Tax=Phenylo... 97 2e-19 UniRef50_Q2G3Y3 Putative uncharacterized protein n=1 Tax=Novosph... 96 3e-19 UniRef50_A1B8H7 Putative uncharacterized protein n=1 Tax=Paracoc... 95 6e-19 UniRef50_A3NLX8 Putative uncharacterized protein n=1 Tax=Burkhol... 88 7e-17 UniRef50_B4RAH1 Putative uncharacterized protein n=1 Tax=Phenylo... 87 1e-16 UniRef50_B4RF19 Putative uncharacterized protein n=1 Tax=Phenylo... 85 6e-16 Sequences not found previously or not previously below threshold: UniRef50_Q2Y904 Putative uncharacterized protein n=1 Tax=Nitroso... 65 7e-10 UniRef50_Q5ZGG3 Terminase small subunit n=1 Tax=Flavobacterium p... 64 1e-09 UniRef50_C6XH08 Putative uncharacterized protein n=1 Tax=Candida... 60 2e-08 UniRef50_B4RDX8 Putative uncharacterized protein n=1 Tax=Phenylo... 59 4e-08 UniRef50_D0IZ08 Putative terminase small subunit protein n=1 Tax... 51 1e-05 UniRef50_UPI0001B4AAA6 hypothetical protein Bfra3_11766 n=1 Tax=... 44 0.001 UniRef50_Q5G7R2 Putative terminase small subunit n=1 Tax=Listone... 42 0.008 UniRef50_Q72BB1 Putative uncharacterized protein n=2 Tax=Desulfo... 41 0.009 UniRef50_B0MP11 Putative uncharacterized protein n=1 Tax=Eubacte... 41 0.009 UniRef50_A4IS71 Putative phage protein n=4 Tax=Bacillales RepID=... 40 0.020 UniRef50_B1J3A1 Anti-FecI sigma factor, FecR n=6 Tax=Pseudomonas... 39 0.060 >UniRef50_P76546 Uncharacterized protein yffO n=3 Tax=Escherichia coli K-12 RepID=YFFO_ECOLI Length = 138 Score = 181 bits (458), Expect = 8e-45, Method: Composition-based stats. Identities = 138/138 (100%), Positives = 138/138 (100%) Query: 1 MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHR 60 MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHR Sbjct: 1 MEGELIENNGLDIYDTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHR 60 Query: 61 QMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALL 120 QMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALL Sbjct: 61 QMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALL 120 Query: 121 AAAKLNSLKHSPFGDDKQ 138 AAAKLNSLKHSPFGDDKQ Sbjct: 121 AAAKLNSLKHSPFGDDKQ 138 >UniRef50_B7LBM5 Putative terminase small subunit n=4 Tax=Proteobacteria RepID=B7LBM5_ECO55 Length = 141 Score = 143 bits (361), Expect = 1e-33, Method: Composition-based stats. Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 6/121 (4%) Query: 16 TSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREG 75 + K GRP+ Y ++A I L++ G SL K+ PGMP+ + RW EH +FR+ Sbjct: 1 MATEKKNVGRPSDYLPEVADDICALLASGESLVKVCKRPGMPAKATVFRWLSEHDEFRDK 60 Query: 76 IAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 A + A A EI + D D ++ KA + A + + +GD Sbjct: 61 YAKATE---ARADSIFEEIFEIADTAIPDA-AEVAKARLRVDTRKWALARMNPRK--YGD 114 Query: 136 D 136 Sbjct: 115 K 115 >UniRef50_A7MK07 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MK07_ENTS8 Length = 150 Score = 142 bits (358), Expect = 3e-33, Method: Composition-based stats. Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 6/121 (4%) Query: 16 TSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREG 75 T T K GRP+ Y ++A I L+++G SLRK+ PGMP+ + RW +H +FR+ Sbjct: 2 TMATESKTGRPSDYLPEVAADICSLLADGESLRKVCERPGMPNKSTVFRWLAQHEEFRDQ 61 Query: 76 IAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 A + A E+ D D AE+ + KA + A + K +GD Sbjct: 62 YAKATE---TRADAIFEEMFDIADTVAEEA-AAVGKARLRIDTRKWALARMNPKK--YGD 115 Query: 136 D 136 Sbjct: 116 K 116 >UniRef50_C4TIH8 Predicted protein n=1 Tax=Escherichia coli O157:H7 RepID=C4TIH8_ECO57 Length = 140 Score = 141 bits (355), Expect = 7e-33, Method: Composition-based stats. Identities = 50/118 (42%), Positives = 68/118 (57%) Query: 15 DTSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFRE 74 D S + + GR KYN++IA QI L V+ SLR+IS PGMP + W L+H + R+ Sbjct: 13 DLSPSKRSAGRKTKYNDRIAEQICLYVARNMSLREISRQPGMPHWDTLKIWMLQHPELRQ 72 Query: 75 GIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSP 132 I + WL E A+E EV+ N+ED P QL A+A+A LL AA+L L+ P Sbjct: 73 TIEAIRWLNGTEFIAEAMECYAEVETNSEDFPAQLALAKARAATLLGAARLMELRKPP 130 >UniRef50_C9XYG4 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9XYG4_CROTZ Length = 164 Score = 141 bits (355), Expect = 7e-33, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 6/120 (5%) Query: 17 SETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGI 76 T K GRP++Y ++A I L+++G SLRK+ PGMP+ + RW +H +FR+ Sbjct: 1 MATESKTGRPSEYLPEVAAGICSLLADGESLRKVCDRPGMPNKSTVFRWLAQHEEFRDQY 60 Query: 77 AWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGDD 136 A + A E+ D D AE+ + KA + A + K +GD Sbjct: 61 AKATE---TRADAIFEEMFDIADTVAEEA-AAVGKARLRIDTRKWALARMNPKK--YGDK 114 >UniRef50_C4XUL8 Putative uncharacterized protein n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XUL8_DESMR Length = 162 Score = 130 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 10/120 (8%) Query: 19 TPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAW 78 K GRP +++++A + + EG LR I PGMP + W ++ F+E A Sbjct: 10 AKKVAGRPCSFSQEVADAVCQGIMEGRGLRSICADPGMPGPATVYSWLTKYASFQEQYAL 69 Query: 79 MSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGDDKQ 138 + +A E++ D + Q+ + A+ A+ L+ +GD + Sbjct: 70 AREV---QADVYFDEVVSIAD---NEPDPQIARNRIDARKWAAS----KLRPKRYGDRLE 119 >UniRef50_Q716H4 Gene 1 protein n=8 Tax=root RepID=Q716H4_BPSFV Length = 140 Score = 128 bits (321), Expect = 6e-29, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 6/120 (5%) Query: 17 SETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGI 76 T K GRP+ Y ++A I L+S G SL K+ PGMP + RW +H DFR+ Sbjct: 1 MATEPKAGRPSDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKHEDFRDKY 60 Query: 77 AWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGDD 136 A + A A EI + D D ++ KA + A + + +GD Sbjct: 61 AKATE---ARADSIFEEIFEIADNAIPDA-AEVAKARLRVDTRKWALARMNPRK--YGDK 114 >UniRef50_D1E3N9 Terminase small subunit n=10 Tax=Neisseria gonorrhoeae RepID=D1E3N9_NEIGO Length = 149 Score = 126 bits (315), Expect = 3e-28, Method: Composition-based stats. Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 6/123 (4%) Query: 16 TSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREG 75 S T +K GRP Y + +A +I ++ G SLR I G+P + + RW + +FR Sbjct: 1 MSGTKRKLGRPTDYTKDMADKICEKIANGRSLRSICAEDGVPPMKTIYRWLEANEEFRHQ 60 Query: 76 IAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 A +A A EII+ D +A+ + KA+ + A AA + K +GD Sbjct: 61 YARARE---KQADYFAEEIIEIAD-SAQAESAAVSKAKLQIDARKWAASKIAPKK--YGD 114 Query: 136 DKQ 138 + Sbjct: 115 KSE 117 >UniRef50_A3L628 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa 2192 RepID=A3L628_PSEAE Length = 188 Score = 124 bits (310), Expect = 1e-27, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 18/133 (13%) Query: 17 SETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLE--HMDFRE 74 + + GRP++Y + + ++EG SLRK+ +PGMP+ +RW + H D RE Sbjct: 30 TAAKRPPGRPSRYTPTVGLAVCTALAEGMSLRKVCQLPGMPAMSTFLRWLADEQHADLRE 89 Query: 75 GIAWMSWLWCAEAGRRAVEIIDEVDINAEDGPKQ-----------LRKAEAKAKALLAAA 123 A A+A A EI+ D + D + +++ + A A Sbjct: 90 QYARARE---AQADTLAEEILQIADDGSNDTYTDDEGRTHVDYDHISRSKLRVDARKWLA 146 Query: 124 KLNSLKHSPFGDD 136 + K +GD Sbjct: 147 SKMAPKK--YGDR 157 >UniRef50_C6N2C3 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N2C3_9GAMM Length = 171 Score = 120 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 48/133 (36%), Gaps = 18/133 (13%) Query: 15 DTSETPKKRGRPAKYNEKIATQIVLLVSEG-YSLRKISM-MPGMPSHRQMMRWQLEHMDF 72 + K GRP Y +A +I ++ ++ + P P+ + W E+ DF Sbjct: 22 EMKALKSKNGRPTTYTLALAKEICDAIASSSKGIKALCQGHPHWPNKDTIFTWLKENQDF 81 Query: 73 REGIAWMSWLWCAEAGRRAVEIIDEVDINAED-----------GPKQLRKAEAKAKALLA 121 + A A+ E+++ D +++D + +++A+ + Sbjct: 82 SDQYARAKQ---AQIECVVDELLEIADDSSQDQVFDSEGQIHFNGQAIQRAKLRIDTRKW 138 Query: 122 AAKLNSLKHSPFG 134 A L +G Sbjct: 139 LA--CKLVPKVYG 149 >UniRef50_B8FNG7 Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FNG7_DESAA Length = 196 Score = 117 bits (294), Expect = 9e-26, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 12/117 (10%) Query: 22 KRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLE--HMDFREGIAWM 79 GRP+ Y ++IA I ++ G S++ I+ MPS + RW + + FRE Sbjct: 2 AAGRPSAYTDEIAETICERIASGESVQSITSDEDMPSSAMVYRWLADARYSKFREMYTRA 61 Query: 80 SWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGDD 136 +A A EII D ED PK KA + +A AA + LK +GD Sbjct: 62 RER---QADFFADEIITIADT--EDNPK---KAAVRVQARQWAA--SKLKPRKYGDR 108 >UniRef50_C6N1Z4 Putative phage associated protein n=2 Tax=Legionella drancourtii LLAP12 RepID=C6N1Z4_9GAMM Length = 157 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 18/134 (13%) Query: 16 TSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGM--PSHRQMMRWQLEHMDFR 73 ++T K GRP KYN ++A +I +++ K+ M P + W ++ +F Sbjct: 1 MAKTSSKIGRPTKYNSELAEEICNVIASTSKGTKVLCKENMHWPCQDTLFAWLKKYPEFS 60 Query: 74 EGIAWMSWLWCAEAGRRAVEIIDEVDINAED-----------GPKQLRKAEAKAKALLAA 122 E A + EI++ D + D + +A K Sbjct: 61 EQYAQAK---ICQIELLIDEILEIADDESNDCFIDEDGKPVSNNSVVNRARLKIDTRKWL 117 Query: 123 AKLNSLKHSPFGDD 136 A + L +G+ Sbjct: 118 A--SKLVPKVYGNK 129 >UniRef50_A9BYN8 Putative terminase small subunit protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BYN8_DELAS Length = 157 Score = 113 bits (283), Expect = 1e-24, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 28/136 (20%) Query: 24 GRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQ--LEHMDFREGIAWMSW 81 GR + +NE IAT++ ++ G SLRKI P MPS +MRW E+ FRE A Sbjct: 2 GRISTFNEDIATKLCDRIAAGESLRKICTDPKMPSMATVMRWLGKPENAAFREQYACARD 61 Query: 82 LWCAEAGRRAVEIIDEVDI----------NAEDGPKQ-----------LRKAEAKAKALL 120 A+A + E+++ D ++D Q + + + + A Sbjct: 62 ---AQADKLVEEMLEIADEECTMVRSDKHGSKDDDGQGNTEVVFDATAVARNKLRVDARK 118 Query: 121 AAAKLNSLKHSPFGDD 136 A + K +GD Sbjct: 119 WVASKMAPKK--YGDK 132 >UniRef50_Q1MCA2 Putative phage-related protein n=8 Tax=Rhizobium RepID=Q1MCA2_RHIL3 Length = 157 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 23/134 (17%) Query: 23 RGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHM--DFREGIAWMS 80 GRP K+ +A I +++G SLR I MP+ ++ W + FR A Sbjct: 2 TGRPTKFTTALADIICERIADGESLRSICRDDAMPAKSTVLAWLADDDKTAFRTKYAQAR 61 Query: 81 WLWCAEAGRRAVEIIDEVDINAED----------------GPKQLRKAEAKAKALLAAAK 124 + +A E+++ D D + +R+++ + A Sbjct: 62 EI---QADGFVDEMVEIADDGTNDWMEKKNADGETTGWQENGEAIRRSQLRIGTRQWIA- 117 Query: 125 LNSLKHSPFGDDKQ 138 LK +G + Sbjct: 118 -EKLKPKKYGAKVE 130 >UniRef50_C6E2C0 Putative uncharacterized protein n=1 Tax=Geobacter sp. M21 RepID=C6E2C0_GEOSM Length = 191 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 22/133 (16%) Query: 21 KKRGRPAKYNEKIATQIVLLVSE-GYSLRKIS-MMPGMPSHRQMMRWQLEHMDFREGIAW 78 KK+GRP Y +IA +I ++ SL+++ PSHR ++RW E+ DF Sbjct: 18 KKQGRPTLYTAEIAEEICYRIATTAKSLKRVCDEDERFPSHRTVLRWVQENSDFCHQYRI 77 Query: 79 MSWLWCAEAGRRAVEIIDEVDINAEDGPKQ---------------LRKAEAKAKALLAAA 123 + A E ++ +D ++ D + + ++ +A A Sbjct: 78 ARE---EQGNFLAFEGLEIIDDSSLDIAFKDDGKGGATAFVDREVIARSRERAAYRKWLA 134 Query: 124 KLNSLKHSPFGDD 136 + L +G+ Sbjct: 135 --SKLAPKRYGEK 145 >UniRef50_B4RHH7 Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RHH7_PHEZH Length = 221 Score = 98.3 bits (243), Expect = 6e-20, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 37/109 (33%), Gaps = 15/109 (13%) Query: 21 KKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMS 80 GRP Y + A I + + G +L I P MP+ + W F E Sbjct: 22 SAIGRPCGYCRETAEAIFVRLCGGEALSAICRDPQMPAASTVYAWLAREPQFAEAYRLAR 81 Query: 81 WLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLK 129 + +A A E + L KA A LA +L L+ Sbjct: 82 EV---QADALAAEGWE------------LAKAATPDTAFLAKVRLEHLR 115 >UniRef50_Q775B8 Bbp26 n=2 Tax=root RepID=Q775B8_9CAUD Length = 194 Score = 98.0 bits (242), Expect = 8e-20, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 21/133 (15%) Query: 21 KKRGRP---AKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIA 77 +K R + Y E IAT+I +++G LR+I MP+ R + W +F E + Sbjct: 17 RKTARMKNASTYTEAIATEICDRIADGEPLRQICRDEHMPAWRTVYHWIEARPEFAERME 76 Query: 78 WMSWLWCAEAGRRAVEIIDEVDINAEDGPKQ-------------LRKAEAKAKALLAAAK 124 A A E ++ + + L + + + L Sbjct: 77 RAR---RAGFDAIAEEALEIANTPQTGEETEESDDGYKVKRGDMLGHRKLQVETRL--KL 131 Query: 125 LNSLKHSPFGDDK 137 L + +GD Sbjct: 132 LAKWHPTKYGDKT 144 >UniRef50_B4R870 Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4R870_PHEZH Length = 265 Score = 96.8 bits (239), Expect = 2e-19, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 4/105 (3%) Query: 26 PAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCA 85 P+ Y I ++ G ++ I+ P MPS + + RW +F +A Sbjct: 153 PSSYTRAAGEAICARLARGEAMSAINADPAMPSSKVVYRWLRTEPEFARMVAEAR---AQ 209 Query: 86 EAGRRAVEIIDEVDINAEDGPKQ-LRKAEAKAKALLAAAKLNSLK 129 + ++I D+ + ++ L +A+A+ L + K Sbjct: 210 QRRALKLKIHLASDLPIQGTTREMLARAKARVARLEGRLGRLTPK 254 Score = 55.2 bits (131), Expect = 6e-07, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 27/61 (44%) Query: 25 RPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWC 84 R +E +I+ ++ G ++++I+ P MPS+ + W +F E + Sbjct: 59 RETSCHEATCREILRRMARGMTIKEITADPDMPSYATLFHWVRTFAEFGEAYRALRAELA 118 Query: 85 A 85 A Sbjct: 119 A 119 >UniRef50_Q2G3Y3 Putative uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2G3Y3_NOVAD Length = 144 Score = 96.4 bits (238), Expect = 3e-19, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 9/114 (7%) Query: 24 GRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLW 83 GRP+ +++ +I+ +S G L +I +PS R ++RW+ E FR A Sbjct: 2 GRPSLKTDEVVEEIIERLSHGEPLARICRDAHLPSFRTVLRWEEEDEAFRHLSARARSY- 60 Query: 84 CAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGDDK 137 A + +D D N E P + L + + +G+ + Sbjct: 61 --GTDYIADDCMDIAD-NPEIEPADK---RIRIDTRLRLIGKWNARK--YGEKQ 106 >UniRef50_A1B8H7 Putative uncharacterized protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B8H7_PARDP Length = 133 Score = 95.3 bits (235), Expect = 6e-19, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 12/121 (9%) Query: 17 SETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGI 76 + A Y I ++ G SL K+ GMP + ++RW + DFR Sbjct: 1 MPIKRDAETIAGYK----DAICEAIACGDSLAKVLRKKGMPGYSTVIRWLRDDEDFRVDY 56 Query: 77 AWMSWLWCAEAGRRAVEIIDEVDINAEDG-PKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 A A+A A +I D VD Q +A A A + + +GD Sbjct: 57 ARARE---AQADADADKIGDIVDRVLAGKLDPQAARAAIDALKWTAGKR----QPKKYGD 109 Query: 136 D 136 Sbjct: 110 K 110 >UniRef50_A3NLX8 Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei 668 RepID=A3NLX8_BURP6 Length = 147 Score = 88.3 bits (217), Expect = 7e-17, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 40/108 (37%), Gaps = 10/108 (9%) Query: 28 KYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEA 87 ++++ + +I L+ +G S+R++ PGMP ++W + ++ Sbjct: 17 EFSQALFDRICALIGDGKSVREVCKGPGMPDRMTFLKWAKRTPELQKQYDDA---CIDRQ 73 Query: 88 GRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 +++ D + ++A+ A + FG+ Sbjct: 74 DAIFDDVLYIADTV-----RDPKRAKVMVDAREWTLARMN--RKRFGN 114 >UniRef50_B4RAH1 Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RAH1_PHEZH Length = 289 Score = 87.2 bits (214), Expect = 1e-16, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 8/106 (7%) Query: 29 YNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEAG 88 ++ + +I+ ++ G SL ++ P MP H + RW E FR+ Sbjct: 88 WSRVLEDEILRRIAAGRSLVEVCEAPEMPHHTSVTRWLDEKPGFRDRYLDARLAQADGLF 147 Query: 89 RRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFG 134 A I E D + ++R A K + ++ L +G Sbjct: 148 DLAWRIAREADED------EVRTARLKVDVIKW--RIGRLSPKRYG 185 Score = 51.7 bits (122), Expect = 6e-06, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 24/65 (36%) Query: 16 TSETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREG 75 T+ + RGR Q+ + G SL + P +P Q+ RW+ F E Sbjct: 7 TAASKDARGRQFARRLAAVQQVCERLEAGESLCGVCRDPLLPQRYQLDRWRAAEPLFDEM 66 Query: 76 IAWMS 80 + Sbjct: 67 VREAR 71 >UniRef50_B4RF19 Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RF19_PHEZH Length = 247 Score = 85.2 bits (209), Expect = 6e-16, Method: Composition-based stats. Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 6/107 (5%) Query: 23 RGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWL 82 G Y +A +I + G SL I MP++ + W+ + +F E + Sbjct: 33 TGGMTTYCPVVANEIYTRLCAGESLSAICRDRDMPANSTVNLWRRDVPEFAEAMRMARQ- 91 Query: 83 WCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLK 129 A+A + + + L A + S + Sbjct: 92 --AQAEAFCDTGWELAMGATPETAY---LTHVRLGQLRWMAAVWSPR 133 >UniRef50_Q2Y904 Putative uncharacterized protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y904_NITMU Length = 190 Score = 65.2 bits (157), Expect = 7e-10, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 18/130 (13%) Query: 18 ETPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIA 77 +PKK R A + I +S G S R + + G+ S R + W + Sbjct: 33 ASPKKSSR-AIKRREALDAIFAGISLGKSARAMCVEVGI-SQRVLWNWLASDEELMRQYQ 90 Query: 78 WMSWLWCAEAGRRAVEIIDEVDINAEDGPKQ-----------LRKAEAKAKALLAAAKLN 126 L A EII+ D + D + +A+ + A A Sbjct: 91 RAKELCV---DAYAEEIIEISDEGSRDTYVDEKGREVINREVIARAQLRIDARKWYAARL 147 Query: 127 SLKHSPFGDD 136 + + +GD Sbjct: 148 APRK--YGDK 155 >UniRef50_Q5ZGG3 Terminase small subunit n=1 Tax=Flavobacterium phage 11b RepID=Q5ZGG3_9CAUD Length = 160 Score = 64.1 bits (154), Expect = 1e-09, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 37/112 (33%), Gaps = 6/112 (5%) Query: 31 EKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCA-EAGR 89 EK + I+ + +G SLR + GMP +W + + Sbjct: 30 EKTFSSILSFIEDGQSLRSVLKREGMPDSTTFYKWIDADENKSIQYTRACETRADVKFES 89 Query: 90 RAVEIIDEVDINAEDGPKQ---LRKAEAKAKALLAAAKLNSLKHSPFGDDKQ 138 + ++E + G ++ K + +L L+ +GD Q Sbjct: 90 IEKDYLEEPQRDPVSGKIDAGWVQLQRLKIDSKKW--ELGKLQPKKYGDKIQ 139 >UniRef50_C6XH08 Putative uncharacterized protein n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XH08_LIBAP Length = 185 Score = 60.2 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 42/107 (39%), Gaps = 4/107 (3%) Query: 29 YNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEAG 88 Y+ ++ I+ V+ G +L + GMP + RW + + +E Sbjct: 21 YSPELFAGILDQVANGKALGHVLRKVGMPKYSTFYRWIKKDLKLQEAYTEALQ---CRLD 77 Query: 89 RRAVEIIDEVDINAEDGPKQLRKAEAKAKA-LLAAAKLNSLKHSPFG 134 A E+++E AE+ + ++ + + + L L + +G Sbjct: 78 LLAEELLEEPAPTAEELANPVFYSKMRDRKQRMGTFLLEKLSNQKYG 124 >UniRef50_B4RDX8 Putative uncharacterized protein n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RDX8_PHEZH Length = 266 Score = 59.1 bits (141), Expect = 4e-08, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Query: 29 YNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEAG 88 ++E + ++ + EG+S +S +PGMP + + +W DF +A Sbjct: 169 FSEDLQEAVLARIVEGHSFNSLSRLPGMPCRKTLGKWVRTRPDFAREVAQACE---DRED 225 Query: 89 RRAVEIIDEVDINAEDGPKQLRKAEAKA 116 A + ++ D +++ + +A Sbjct: 226 IFADQALEIALAGGPDAGRRVGRLRRQA 253 Score = 49.0 bits (115), Expect = 5e-05, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 24/51 (47%) Query: 25 RPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREG 75 R ++ +A ++ +S G +L + P MPS R++ W+ F E Sbjct: 31 RRDAFDPAVAKALLDRLSAGEALAAVVRDPAMPSWRRLRLWRATAPGFAEA 81 Score = 40.9 bits (94), Expect = 0.012, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 29 YNEKIATQIVLLVSEGYSLRKISM-MPGMPSHRQMMRWQLEHMDF 72 +++ A +I++ ++ G LR + P +PS + RW+ E+ +F Sbjct: 104 FDQAAADRIIVGLNRGEGLRALLNGDPSLPSAATVARWRRENREF 148 >UniRef50_D0IZ08 Putative terminase small subunit protein n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IZ08_COMTE Length = 142 Score = 50.6 bits (119), Expect = 1e-05, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 27/107 (25%), Gaps = 21/107 (19%) Query: 47 LRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEAGRRAVEIIDEVDINAEDGP 106 + ++ M+ W E A + + A EI+ D Sbjct: 1 MADFCRQHEF-AYTTMLDWINADSSRAEMYARARE---DRSDKLADEIVAISDECEYAPI 56 Query: 107 KQ---------------LRKAEAKAKALLAAAKLNSLKHSPFGDDKQ 138 + + + + A A LK +GD Q Sbjct: 57 TDMSTGETIAVAFDKTAVARNKLRVDARKWIAA--KLKPRVYGDKVQ 101 >UniRef50_UPI0001B4AAA6 hypothetical protein Bfra3_11766 n=1 Tax=Bacteroides fragilis 3_1_12 RepID=UPI0001B4AAA6 Length = 176 Score = 44.0 bits (102), Expect = 0.001, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 5/69 (7%) Query: 26 PAKYNEKIATQIVLLV-SEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWC 84 AKYN KI I L+ ++ Y++ ++ + G+ S W+ +F E I Sbjct: 1 MAKYNTKIVETICSLIRADSYTIAEVCRLSGI-SESTFHEWKASKPEFSECIKKA---EA 56 Query: 85 AEAGRRAVE 93 A E Sbjct: 57 ARMEFFVTE 65 >UniRef50_Q5G7R2 Putative terminase small subunit n=1 Tax=Listonella phage phiHSIC RepID=Q5G7R2_9CAUD Length = 147 Score = 41.7 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 25/70 (35%) Query: 19 TPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAW 78 + K G P KY + ++ + EG S + G S + + W+ H DF + Sbjct: 16 SETKMGAPTKYKPEYCELLMDMAKEGASFTEFRAAIGAVSRQTLHNWKEAHPDFLDAYTR 75 Query: 79 MSWLWCAEAG 88 A Sbjct: 76 AEAYGEAYWD 85 >UniRef50_Q72BB1 Putative uncharacterized protein n=2 Tax=Desulfovibrio vulgaris RepID=Q72BB1_DESVH Length = 202 Score = 41.3 bits (95), Expect = 0.009, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Query: 22 KRGRPAKYNEKIATQIVLLVS-EGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMS 80 +RGRP++YN A Q ++ G + R+++ + G+ + RW+ EH +F E Sbjct: 26 RRGRPSRYNAAYAMQAREAIAMSGMTDRQLARLFGV-DGSTLTRWRKEHPEFAEACRKGR 84 Query: 81 WL 82 Sbjct: 85 DA 86 >UniRef50_B0MP11 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP11_9FIRM Length = 379 Score = 41.3 bits (95), Expect = 0.009, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 25/96 (26%), Gaps = 3/96 (3%) Query: 28 KYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLWCAEA 87 Y ++ ++ V G I G+P W + + E A Sbjct: 3 TYTQEEKQAVIDRVISGEPSAHILADTGIP-KSTFYSWLRIYQE--EQNAANRRKVDIRN 59 Query: 88 GRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAA 123 + ++ E A + L AA Sbjct: 60 FHLLENKVARLESIVEILKSAPCTPRAPLRQRLYAA 95 >UniRef50_A4IS71 Putative phage protein n=4 Tax=Bacillales RepID=A4IS71_GEOTN Length = 177 Score = 40.2 bits (92), Expect = 0.020, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 4/123 (3%) Query: 19 TPKKRGRPAKYNEKIATQIVLLVSEGYSLRKISMMPGMPSHRQMMRWQLEHMDFREGIAW 78 T KRGRP K ++ ++V ++ G + G+ + W +E +A Sbjct: 2 TRNKRGRPIKLTPELQEELVKVIRAGNYIETACAYVGI-NKTTFYDWLKRGAREKERLAK 60 Query: 79 ---MSWLWCAEAGRRAVEIIDEVDINAEDGPKQLRKAEAKAKALLAAAKLNSLKHSPFGD 135 + +++ AE + A+ AA +L +G Sbjct: 61 NPNARPKKSEQPFVELSNAVEKALAQAEIRDVAIIGKAAEENWQAAAWRLERKFPERWGR 120 Query: 136 DKQ 138 ++ Sbjct: 121 KER 123 >UniRef50_B1J3A1 Anti-FecI sigma factor, FecR n=6 Tax=Pseudomonas RepID=B1J3A1_PSEPW Length = 328 Score = 38.6 bits (88), Expect = 0.060, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 3/50 (6%) Query: 47 LRKISMMPGMPSHRQMMRWQLEHMDFREGIAWMSWLW---CAEAGRRAVE 93 L +I+ P + RW L RE A LW A A R A E Sbjct: 19 LARINEQPEVAHSAAFQRWLLADPRHREAYAQAQALWQKSAAPAARLAEE 68 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.301 0.122 0.334 Lambda K H 0.267 0.0385 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 732,861,414 Number of Sequences: 3077464 Number of extensions: 23936357 Number of successful extensions: 78054 Number of sequences better than 1.0e-01: 34 Number of HSP's better than 0.1 without gapping: 62 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 77921 Number of HSP's gapped (non-prelim): 94 length of query: 138 length of database: 1,040,396,356 effective HSP length: 102 effective length of query: 36 effective length of database: 726,495,028 effective search space: 26153821008 effective search space used: 26153821008 T: 11 A: 40 X1: 16 ( 6.9 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 87 (38.2 bits)