BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (412 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q1LSL7 Phosphatase n=12 Tax=Gammaproteobacteria RepID=C... 557 e-157 UniRef50_Q65Q41 Phosphatase n=50 Tax=Gammaproteobacteria RepID=C... 521 e-146 UniRef50_C6N613 tRNA nucleotidyltransferase n=2 Tax=Legionella R... 436 e-121 UniRef50_A6FG51 Putative tRNA nucleotidyltransferase n=1 Tax=Mor... 427 e-118 UniRef50_A3NQD4 Phosphatase n=74 Tax=Bacteria RepID=CCA_BURP0 423 e-117 UniRef50_A1W3D0 Phosphatase n=492 Tax=cellular organisms RepID=C... 422 e-116 UniRef50_Q7U350 CCA-adding enzyme n=2 Tax=Candidatus Blochmannia... 417 e-115 UniRef50_A8PL05 Multifunctional CCA protein n=1 Tax=Rickettsiell... 403 e-111 UniRef50_A6VN94 CCA-adding enzyme n=4 Tax=Pasteurellaceae RepID=... 397 e-109 UniRef50_Q125I3 Metal dependent phosphohydrolase n=2 Tax=Proteob... 393 e-108 UniRef50_B8D8L9 CCA-adding enzyme n=4 Tax=Buchnera aphidicola Re... 390 e-107 UniRef50_Q8D2W4 CCA-adding enzyme n=1 Tax=Wigglesworthia glossin... 378 e-103 UniRef50_Q058D0 CCA-adding enzyme n=2 Tax=Buchnera aphidicola Re... 370 e-101 UniRef50_Q1IG27 CCA-adding enzyme n=7 Tax=Gammaproteobacteria Re... 363 5e-99 UniRef50_Q3IK69 tRNA nucleotidyl transferase n=2 Tax=Alteromonad... 353 7e-96 UniRef50_A0Y839 TRNA nucleotidyltransferase, putative n=1 Tax=ma... 332 2e-89 UniRef50_Q2BK09 TRNA nucleotidyl transferase n=1 Tax=Neptuniibac... 331 3e-89 UniRef50_Q5QY23 CCA-adding enzyme n=1 Tax=Idiomarina loihiensis ... 328 3e-88 UniRef50_B4RVV4 CCA-adding enzyme n=2 Tax=Alteromonas macleodii ... 326 1e-87 UniRef50_A9KEZ9 CCA-adding enzyme n=6 Tax=Coxiella burnetii RepI... 320 4e-86 UniRef50_A0Z6Y3 TRNA nucleotidyltransferase, putative n=2 Tax=un... 319 1e-85 UniRef50_Q1QZ27 Polynucleotide adenylyltransferase region n=1 Ta... 310 8e-83 UniRef50_A1U5G5 CCA-adding enzyme n=3 Tax=Alteromonadales RepID=... 306 1e-81 UniRef50_A6VU49 Polynucleotide adenylyltransferase region n=2 Ta... 303 6e-81 UniRef50_A3WPG7 TRNA nucleotidyltransferase n=1 Tax=Idiomarina b... 299 2e-79 UniRef50_Q1QC26 Polynucleotide adenylyltransferase region n=2 Ta... 295 2e-78 UniRef50_B5JXP2 tRNA nucleotidyltransferase n=1 Tax=gamma proteo... 288 2e-76 UniRef50_C8N8W3 Multifunctional CCA protein n=1 Tax=Cardiobacter... 279 1e-73 UniRef50_UPI0000E87B3C tRNA nucleotidyl transferase, putative n=... 275 2e-72 UniRef50_A1AVM9 Polynucleotide adenylyltransferase region n=3 Ta... 274 5e-72 UniRef50_UPI0000E0E587 tRNA nucleotidyltransferase n=1 Tax=Rhodo... 271 3e-71 UniRef50_A0Q8A2 CCA-adding enzyme n=18 Tax=Francisella RepID=CCA... 269 1e-70 UniRef50_C8PZE9 Multifunctional CCA protein n=1 Tax=Enhydrobacte... 266 1e-69 UniRef50_A5EXT8 TRNA nucleotidyltransferase n=1 Tax=Dichelobacte... 266 1e-69 UniRef50_A5WEX7 tRNA cytidylyltransferase n=1 Tax=Psychrobacter ... 264 5e-69 UniRef50_A6GQU7 Polynucleotide adenylyltransferase region:Metal-... 261 4e-68 UniRef50_Q7U391 CCA-adding enzyme n=5 Tax=Bordetella RepID=CCA_B... 257 6e-67 UniRef50_D1RE93 Multifunctional CCA protein n=1 Tax=Legionella l... 251 3e-65 UniRef50_A4T0E4 Polynucleotide adenylyltransferase region n=2 Ta... 249 9e-65 UniRef50_B6BWF7 CCA-adding enzyme n=1 Tax=beta proteobacterium K... 249 1e-64 UniRef50_A0L904 Polynucleotide adenylyltransferase region n=1 Ta... 239 2e-61 UniRef50_C5ZY12 tRNA nucleotidyl transferase n=3 Tax=Helicobacte... 218 4e-55 UniRef50_C6NV27 tRNA nucleotidyltransferase n=1 Tax=Acidithiobac... 216 8e-55 UniRef50_D1Y2S7 Multifunctional CCA protein n=1 Tax=Pyramidobact... 213 9e-54 UniRef50_Q3EZB5 TRNA nucleotidyltransferase n=2 Tax=Bacillus thu... 207 6e-52 UniRef50_UPI00016992C1 multifunctional tRNA nucleotidyl transfer... 202 3e-50 UniRef50_C4V4H3 Possible tRNA adenylyltransferase n=1 Tax=Seleno... 199 2e-49 UniRef50_Q76YD7 Putative uncharacterized protein n=1 Tax=Aeromon... 197 7e-49 UniRef50_C9KIT0 tRNA nucleotidyltransferase n=3 Tax=Veillonellac... 196 2e-48 UniRef50_B8QTX7 tRNA nucleotidyltransferase/poly(A) polymerase n... 194 7e-48 UniRef50_UPI0001698637 polynucleotide adenylyltransferase/metal ... 193 1e-47 UniRef50_Q466Z1 tRNA nucleotidyltransferase n=1 Tax=Methanosarci... 186 1e-45 UniRef50_B5JPR9 tRNA nucleotidyltransferase/poly(A) polymerase f... 185 3e-45 UniRef50_Q0F3A3 TRNA nucleotidyltransferase n=1 Tax=Mariprofundu... 183 9e-45 UniRef50_A6Q8W0 Polynucleotide adenylyltransferase/metal-depende... 175 4e-42 UniRef50_D2L6A0 Polynucleotide adenylyltransferase/metal depende... 169 2e-40 UniRef50_B0AC07 Putative uncharacterized protein n=1 Tax=Clostri... 168 4e-40 UniRef50_C7N377 tRNA nucleotidyltransferase/poly(A) polymerase n... 166 2e-39 UniRef50_C4XGZ8 Putative tRNA nucleotidyltransferase n=1 Tax=Des... 166 2e-39 UniRef50_D1U5B9 Polynucleotide adenylyltransferase/metal depende... 162 2e-38 UniRef50_A2PXU3 tRNA nucleotidyltransferase n=2 Tax=Vibrio chole... 161 4e-38 UniRef50_UPI0001910309 multifunctional tRNA nucleotidyl transfer... 160 1e-37 UniRef50_A5UUL6 Polynucleotide adenylyltransferase/metal depende... 158 3e-37 UniRef50_C8X424 tRNA adenylyltransferase n=1 Tax=Desulfohalobium... 155 2e-36 UniRef50_A1AQP2 Metal dependent phosphohydrolase n=4 Tax=Desulfu... 154 4e-36 UniRef50_B1ZUE5 Polynucleotide adenylyltransferase region n=1 Ta... 147 1e-33 UniRef50_C3CTV2 Polynucleotide adenylyltransferase/metal-depende... 146 1e-33 UniRef50_C1XKS4 Uncharacterized domain HDIG-containing protein n... 144 9e-33 UniRef50_C0A6X1 Polynucleotide adenylyltransferase region n=1 Ta... 142 2e-32 UniRef50_C7LRX4 Polynucleotide adenylyltransferase/metal depende... 142 3e-32 UniRef50_Q72B04 tRNA nucleotidyltransferase, putative n=4 Tax=De... 141 4e-32 UniRef50_C6E493 Polynucleotide adenylyltransferase/metal depende... 141 4e-32 UniRef50_C6BVC7 Polynucleotide adenylyltransferase region n=1 Ta... 140 7e-32 UniRef50_C7LX86 tRNA adenylyltransferase n=1 Tax=Desulfomicrobiu... 140 7e-32 UniRef50_B0N1P8 Putative uncharacterized protein n=3 Tax=Bacteri... 135 2e-30 UniRef50_UPI000196A9FA hypothetical protein CATMIT_01143 n=1 Tax... 133 1e-29 UniRef50_D1ND14 tRNA nucleotidyltransferase (Fragment) n=1 Tax=H... 131 6e-29 UniRef50_C6X292 tRNA nucleotidyltransferase n=24 Tax=Bacteroidet... 130 1e-28 UniRef50_C1F9R3 tRNA nucleotidyltransferase/poly(A) polymerase f... 129 2e-28 UniRef50_Q2LST9 Poly A polymerase n=1 Tax=Syntrophus aciditrophi... 127 1e-27 UniRef50_Q1IUE8 Metal dependent phosphohydrolase n=1 Tax=Candida... 123 1e-26 UniRef50_B4S8E4 Polynucleotide adenylyltransferase/metal depende... 122 2e-26 UniRef50_A3DF92 Metal dependent phosphohydrolase n=3 Tax=Clostri... 122 3e-26 UniRef50_A8REM2 Putative uncharacterized protein n=1 Tax=Eubacte... 121 5e-26 UniRef50_B8HHS6 Polynucleotide adenylyltransferase/metal depende... 121 6e-26 UniRef50_D1N4S4 Polynucleotide adenylyltransferase/metal depende... 121 6e-26 UniRef50_C0GPD7 Polynucleotide adenylyltransferase region n=1 Ta... 120 9e-26 UniRef50_Q7P2R0 POLY(A) POLYMERASE n=10 Tax=Fusobacterium RepID=... 119 1e-25 UniRef50_A0M3Q3 TRNA nucleotidyltransferase n=19 Tax=Bacteroidet... 119 2e-25 UniRef50_C7RG10 Polynucleotide adenylyltransferase/metal depende... 119 2e-25 UniRef50_A5Z8C9 Putative uncharacterized protein n=1 Tax=Eubacte... 119 2e-25 UniRef50_B1I1S2 Metal dependent phosphohydrolase n=2 Tax=Clostri... 117 6e-25 UniRef50_D1VT34 tRNA adenylyltransferase n=1 Tax=Peptoniphilus l... 117 9e-25 UniRef50_B2UM12 Polynucleotide adenylyltransferase/metal depende... 116 1e-24 UniRef50_Q1Q5Z9 Similar to poly(A) polymerase n=2 Tax=Candidatus... 116 1e-24 UniRef50_B8DJQ4 Metal dependent phosphohydrolase n=1 Tax=Desulfo... 115 2e-24 UniRef50_Q73NW9 PolyA polymerase family protein n=1 Tax=Treponem... 115 3e-24 UniRef50_A7IIF9 tRNA nucleotidyltransferase/poly(A) polymerase f... 115 4e-24 UniRef50_C0R197 PolyA polymerase n=2 Tax=Brachyspira RepID=C0R19... 114 5e-24 UniRef50_B3DZP1 tRNA nucleotidyltransferase/poly(A) polymerase n... 114 5e-24 UniRef50_D1CJ19 Polynucleotide adenylyltransferase/metal depende... 114 5e-24 UniRef50_C8W673 Polynucleotide adenylyltransferase/metal depende... 114 6e-24 UniRef50_B0MLX5 Putative uncharacterized protein n=1 Tax=Eubacte... 114 6e-24 UniRef50_A5FA68 Polynucleotide adenylyltransferase/metal depende... 113 1e-23 UniRef50_B9L5K6 CCA-adding enzyme n=1 Tax=Nautilia profundicola ... 113 2e-23 UniRef50_Q2RZU6 TRNA nucleotidyltransferase/poly(A) polymerase f... 112 3e-23 UniRef50_D2RM72 Polynucleotide adenylyltransferase/metal depende... 111 5e-23 UniRef50_C3PKZ9 tRNA nucleotidyltransferase n=2 Tax=Corynebacter... 111 6e-23 UniRef50_A4N4C8 tRNA nucleotidyltransferase n=1 Tax=Haemophilus ... 110 8e-23 UniRef50_A8ZWH5 Polynucleotide adenylyltransferase/metal depende... 110 1e-22 UniRef50_B8FTI8 Polynucleotide adenylyltransferase region n=2 Ta... 110 1e-22 UniRef50_B6BGZ3 Polynucleotide adenylyltransferase region n=1 Ta... 110 1e-22 UniRef50_C6PT81 Polynucleotide adenylyltransferase/metal depende... 109 2e-22 UniRef50_Q7M883 RNA NUCLEOTIDYLTRANSFERASE n=1 Tax=Wolinella suc... 109 2e-22 UniRef50_A7ZE73 Multifunctional CCA protein n=4 Tax=Campylobacte... 108 3e-22 UniRef50_B1KWG6 PolyA polymerase family protein n=16 Tax=Clostri... 108 3e-22 UniRef50_Q47K87 Metal-dependent phosphohydrolase n=143 Tax=Actin... 108 3e-22 UniRef50_D1C7Z9 Polynucleotide adenylyltransferase/metal depende... 108 4e-22 UniRef50_C9RRD1 Polynucleotide adenylyltransferase region n=1 Ta... 108 5e-22 UniRef50_C9XLQ0 Putative poly(A) polymerase n=6 Tax=Clostridium ... 107 6e-22 UniRef50_D1PZ77 PolyA polymerase n=1 Tax=Prevotella bergensis DS... 107 8e-22 UniRef50_B7CE33 Putative uncharacterized protein n=1 Tax=Eubacte... 107 8e-22 UniRef50_Q1WU19 CCA-adding enzyme n=30 Tax=Lactobacillales RepID... 106 1e-21 UniRef50_C6DY30 Poly A polymerase family protein n=2 Tax=Clostri... 106 2e-21 UniRef50_A0RPP8 PolyA polymerase family protein n=2 Tax=Campylob... 105 2e-21 UniRef50_A1FAS5 Multifunctional CCA protein (Fragment) n=1 Tax=V... 105 3e-21 UniRef50_UPI0001C30E56 polynucleotide adenylyltransferase/metal ... 105 3e-21 UniRef50_B5YFC2 Poly A polymerase, putative n=2 Tax=Dictyoglomus... 105 3e-21 UniRef50_D1AKE0 Polynucleotide adenylyltransferase/metal depende... 105 3e-21 UniRef50_C4GD15 Putative uncharacterized protein n=1 Tax=Shuttle... 105 4e-21 UniRef50_B9XMC7 Polynucleotide adenylyltransferase/metal depende... 104 6e-21 UniRef50_A8MJB7 Polynucleotide adenylyltransferase/metal depende... 104 7e-21 UniRef50_A9KL25 Polynucleotide adenylyltransferase/metal depende... 103 8e-21 UniRef50_B0K130 Polynucleotide adenylyltransferase/metal depende... 103 9e-21 UniRef50_C8PQT7 tRNA adenylyltransferase n=1 Tax=Treponema vince... 103 1e-20 UniRef50_C8PE32 PolyA polymerase family protein n=1 Tax=Campylob... 103 1e-20 UniRef50_UPI0001BC63FF Poly(A) polymerase n=3 Tax=Fusobacterium ... 103 1e-20 UniRef50_A6DBJ0 Putative RNA nucleotidyltransferase n=1 Tax=Cami... 102 2e-20 UniRef50_B8I4X8 Polynucleotide adenylyltransferase/metal depende... 102 2e-20 UniRef50_B5ELD4 Polynucleotide adenylyltransferase region n=2 Ta... 102 2e-20 UniRef50_B4U5T6 Polynucleotide adenylyltransferase region n=1 Ta... 102 3e-20 UniRef50_C9LM50 PolyA polymerase n=1 Tax=Dialister invisus DSM 1... 102 3e-20 UniRef50_C7M1E9 Polynucleotide adenylyltransferase/metal depende... 102 3e-20 UniRef50_C7MMX1 Uncharacterized domain HDIG-containing protein n... 101 5e-20 UniRef50_A2VMT0 Poly(A) polymerase pcnA n=5 Tax=Corynebacterinea... 101 6e-20 UniRef50_A1HMM1 Polynucleotide adenylyltransferase n=1 Tax=Therm... 100 8e-20 UniRef50_B1GZF8 CCA-adding tRNA nucleotidyltransferase n=1 Tax=u... 100 1e-19 UniRef50_B8FBG8 Polynucleotide adenylyltransferase/metal depende... 100 1e-19 UniRef50_C1IAF4 PolyA polymerase n=1 Tax=Clostridium sp. 7_2_43F... 100 1e-19 UniRef50_A6W2I1 Poly(A) polymerase n=6 Tax=Oceanospirillales Rep... 100 1e-19 UniRef50_B9KCP2 tRNA nucleotidyltransferase/formyltetrahydrofola... 100 1e-19 UniRef50_Q5WGA1 CCA-adding enzyme n=1 Tax=Bacillus clausii KSM-K... 100 2e-19 UniRef50_A5G663 Polynucleotide adenylyltransferase region n=1 Ta... 100 2e-19 UniRef50_Q30UP5 Polynucleotide adenylyltransferase region n=1 Ta... 99 2e-19 UniRef50_UPI0001C37B0D poly A polymerase family protein n=1 Tax=... 99 3e-19 UniRef50_B8FPL4 Polynucleotide adenylyltransferase region n=3 Ta... 99 3e-19 UniRef50_B1CAN8 Putative uncharacterized protein n=1 Tax=Anaerof... 99 3e-19 UniRef50_A8Z5W3 tRNA nucleotidyltransferase n=2 Tax=Candidatus S... 99 3e-19 UniRef50_D1BP90 Polynucleotide adenylyltransferase/metal depende... 99 4e-19 UniRef50_C6P818 Polynucleotide adenylyltransferase n=1 Tax=Therm... 99 4e-19 UniRef50_C0M731 CCA-adding enzyme n=4 Tax=Streptococcus dysgalac... 98 6e-19 UniRef50_A7I2S1 PolyA polymerase family protein n=1 Tax=Campylob... 97 8e-19 UniRef50_C7N8U3 Polynucleotide adenylyltransferase/metal depende... 97 1e-18 UniRef50_C7N4V8 tRNA nucleotidyltransferase/poly(A) polymerase n... 97 1e-18 UniRef50_Q6AJ41 Related to poly(A) polymerase n=1 Tax=Desulfotal... 96 2e-18 UniRef50_A8ERU1 tRNA nucleotidyltransferase/poly(A) polymerase n... 96 3e-18 UniRef50_Q04F51 tRNA nucleotidyltransferase/poly(A) polymerase n... 96 3e-18 UniRef50_A4W0U8 CCA-adding enzyme n=68 Tax=Streptococcaceae RepI... 96 3e-18 UniRef50_A9F087 Cca protein n=2 Tax=Myxococcales RepID=A9F087_SORC5 96 3e-18 UniRef50_B5YF98 PolyA polymerase family protein n=2 Tax=Dictyogl... 95 4e-18 UniRef50_Q834S5 CCA-adding enzyme n=40 Tax=Bacilli RepID=CCA_ENTFA 94 6e-18 UniRef50_C4F914 Putative uncharacterized protein n=1 Tax=Collins... 94 7e-18 UniRef50_Q1J0S0 Metal dependent phosphohydrolase n=3 Tax=Deinoco... 94 7e-18 UniRef50_A6CRX0 tRNA nucleotidyltransferase n=1 Tax=Bacillus sp.... 94 7e-18 UniRef50_C0WDS1 Metal-dependent phosphohydrolase n=1 Tax=Acidami... 94 8e-18 UniRef50_A4J3L2 Polynucleotide adenylyltransferase region n=4 Ta... 94 8e-18 UniRef50_B1MYC1 CCA-adding enzyme n=7 Tax=Lactobacillales RepID=... 94 1e-17 UniRef50_A6P236 Putative uncharacterized protein n=1 Tax=Bactero... 94 1e-17 UniRef50_Q0FDP1 Poly A polymerase family protein n=1 Tax=Rhodoba... 94 1e-17 UniRef50_B4CZL9 tRNA adenylyltransferase n=1 Tax=Chthoniobacter ... 94 1e-17 UniRef50_Q6MM27 Poly A polymerase n=1 Tax=Bdellovibrio bacteriov... 94 1e-17 UniRef50_A8UST1 Poly A polymerase n=2 Tax=Aquificaceae RepID=A8U... 93 2e-17 UniRef50_Q30ZL6 tRNA nucleotidyltransferase, putative n=1 Tax=De... 93 2e-17 UniRef50_A4IQ63 CCA-adding enzyme n=11 Tax=Bacillaceae RepID=CCA... 93 2e-17 UniRef50_UPI00016985D9 multifunctional tRNA nucleotidyl transfer... 92 3e-17 UniRef50_C5RPI7 tRNA adenylyltransferase n=1 Tax=Clostridium cel... 92 3e-17 UniRef50_C4G3Z5 Putative uncharacterized protein n=1 Tax=Abiotro... 92 4e-17 UniRef50_C8NF31 Poly A polymerase n=2 Tax=Granulicatella RepID=C... 92 4e-17 UniRef50_A8F7Y4 CBS domain containing protein n=1 Tax=Thermotoga... 91 6e-17 UniRef50_C0ZCG8 Probable tRNA CCA-adding enzyme n=1 Tax=Brevibac... 91 6e-17 UniRef50_A0Q3L3 PolyA polymerase family protein n=2 Tax=Clostrid... 91 7e-17 UniRef50_A8FEH9 CCA-adding enzyme n=5 Tax=Bacillus RepID=CCA_BACP2 91 7e-17 UniRef50_Q3AAR6 PolyA polymerase family protein n=1 Tax=Carboxyd... 91 7e-17 UniRef50_C5CF12 CBS domain containing protein n=1 Tax=Kosmotoga ... 91 8e-17 UniRef50_Q97M87 PolyA polymerase n=1 Tax=Clostridium acetobutyli... 91 9e-17 UniRef50_A1UTI1 TRNA-nucleotidyltransferase n=4 Tax=Rhizobiales ... 91 1e-16 UniRef50_C0WTJ5 tRNA nucleotidyltransferase/poly(A) polymerase n... 91 1e-16 UniRef50_A6DP87 Putative poly(A) polymerase n=1 Tax=Lentisphaera... 91 1e-16 UniRef50_C3WFG0 Poly(A) polymerase n=1 Tax=Fusobacterium mortife... 91 1e-16 UniRef50_C4LGI1 tRNA nucleotidyltransferase n=3 Tax=Corynebacter... 91 1e-16 UniRef50_Q1IQB2 Polynucleotide adenylyltransferase n=1 Tax=Candi... 90 1e-16 UniRef50_C1TKY8 tRNA nucleotidyltransferase/poly(A) polymerase n... 90 2e-16 UniRef50_D1B359 Polynucleotide adenylyltransferase region n=1 Ta... 90 2e-16 UniRef50_Q3A9F0 PolyA polymerase/tRNA nucleotidyltransferase fam... 90 2e-16 UniRef50_Q39TB4 Polynucleotide adenylyltransferase region n=1 Ta... 89 2e-16 UniRef50_Q4K5Y6 Poly(A) polymerase n=49 Tax=cellular organisms R... 89 2e-16 UniRef50_C0EC94 Putative uncharacterized protein n=1 Tax=Clostri... 89 2e-16 UniRef50_B4UMC4 Poly(A) polymerase n=4 Tax=Anaeromyxobacter RepI... 89 3e-16 UniRef50_Q1JYT1 Polynucleotide adenylyltransferase region n=1 Ta... 89 3e-16 UniRef50_C9R7Y1 CBS domain containing protein n=1 Tax=Ammonifex ... 89 4e-16 UniRef50_UPI0001C421DE tRNA CCA-pyrophosphorylase n=1 Tax=Bacill... 89 4e-16 UniRef50_D1VN96 Polynucleotide adenylyltransferase/metal depende... 89 4e-16 UniRef50_C6CUG0 Polynucleotide adenylyltransferase region n=1 Ta... 88 5e-16 UniRef50_Q1YQK0 Poly(A) polymerase n=1 Tax=gamma proteobacterium... 88 5e-16 UniRef50_C0GDZ3 CBS domain containing protein n=1 Tax=Dethiobact... 88 5e-16 UniRef50_Q0AVZ3 tRNA nucleotidyltransferase (CCA-adding enzyme) ... 88 6e-16 UniRef50_B9CKT6 Cca-adding enzyme n=1 Tax=Atopobium rimae ATCC 4... 88 6e-16 UniRef50_Q6MBL7 Putative Poly(A) polymerase n=2 Tax=Parachlamydi... 88 6e-16 UniRef50_Q8EQD6 CCA-adding enzyme n=1 Tax=Oceanobacillus iheyens... 88 7e-16 UniRef50_C9L4X1 tRNA nucleotidyltransferase/poly(A) polymerase f... 88 7e-16 UniRef50_C2E651 tRNA CCA-pyrophosphorylase n=1 Tax=Lactobacillus... 88 7e-16 UniRef50_Q9KC89 CCA-adding enzyme n=1 Tax=Bacillus halodurans Re... 87 8e-16 UniRef50_B5ES11 Poly(A) polymerase n=8 Tax=Proteobacteria RepID=... 87 9e-16 UniRef50_C8WIX9 Polynucleotide adenylyltransferase/metal depende... 87 1e-15 UniRef50_C5NYM2 CCA-adding enzyme n=1 Tax=Gemella haemolysans AT... 87 1e-15 UniRef50_A5IJ71 CBS domain containing protein n=5 Tax=Thermotoga... 87 1e-15 UniRef50_B7RKY8 tRNA nucleotidyltransferase n=2 Tax=Rhodobactera... 87 1e-15 UniRef50_C8P0Q2 tRNA adenylyltransferase n=1 Tax=Erysipelothrix ... 87 1e-15 UniRef50_C7LTC9 Poly(A) polymerase n=1 Tax=Desulfomicrobium bacu... 87 1e-15 UniRef50_Q2RIR3 Polynucleotide adenylyltransferase region n=1 Ta... 86 2e-15 UniRef50_D2LT60 CBS domain containing protein n=1 Tax=Bacillus c... 86 2e-15 UniRef50_Q2B3W5 TRNA nucleotidyltransferase n=1 Tax=Bacillus sp.... 86 2e-15 UniRef50_B2S2L8 Polynucleotide adenylyltransferase n=2 Tax=Trepo... 86 2e-15 UniRef50_B1R1E7 Cca-adding enzyme n=2 Tax=Clostridium butyricum ... 86 3e-15 UniRef50_C1XQ82 Uncharacterized domain HDIG-containing protein n... 86 4e-15 UniRef50_Q126S3 Poly(A) polymerase n=15 Tax=Burkholderiales RepI... 85 4e-15 UniRef50_B2A4Y6 CBS domain containing protein n=1 Tax=Natranaero... 85 4e-15 UniRef50_UPI000197324F tRNA nucleotidyltransferase/poly(A) polym... 85 5e-15 UniRef50_Q1CTN2 Poly(A) polymerase n=15 Tax=Helicobacter RepID=Q... 85 6e-15 UniRef50_A4E6N1 Putative uncharacterized protein n=2 Tax=Collins... 84 6e-15 UniRef50_A6Q2Y3 RNA nucleotidyltransferase n=1 Tax=Nitratiruptor... 84 7e-15 UniRef50_Q74B57 PolyA polymerase family protein n=1 Tax=Geobacte... 84 7e-15 UniRef50_A6TR64 Polynucleotide adenylyltransferase region n=1 Ta... 84 8e-15 UniRef50_A3M290 Poly(A) polymerase I (PAP) n=18 Tax=Acinetobacte... 84 8e-15 UniRef50_B8CW03 CBS domain containing protein n=1 Tax=Halothermo... 84 9e-15 UniRef50_Q01SN7 Polynucleotide adenylyltransferase region n=1 Ta... 84 1e-14 UniRef50_C3KX88 Conserved domain protein n=11 Tax=Clostridium Re... 84 1e-14 UniRef50_A4XLP3 tRNA adenylyltransferase n=2 Tax=Clostridia RepI... 84 1e-14 UniRef50_Q043S5 CCA-adding enzyme n=7 Tax=Lactobacillus RepID=CC... 83 2e-14 UniRef50_C6JPJ4 Poly(A) polymerase n=1 Tax=Fusobacterium varium ... 83 2e-14 >UniRef50_Q1LSL7 Phosphatase n=12 Tax=Gammaproteobacteria RepID=CCA_BAUCH Length = 412 Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust. Identities = 264/407 (64%), Positives = 327/407 (80%), Gaps = 3/407 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD LL +PVK+RDWVV+G+T Q+ML AGYQQVG+DFPVFLHP++HEEYAL Sbjct: 1 MKKYLVGGAVRDRLLQIPVKERDWVVIGTTLQDMLKAGYQQVGKDFPVFLHPKSHEEYAL 60 Query: 61 ARTERKSGSG-YTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 AR E+KS +G YTGFT A+ ++TLE+DLKRRDLTINA+A D+NG +IDPYNG DL R Sbjct: 61 ARIEKKSATGGYTGFTYKASSEITLEEDLKRRDLTINAIACDENGSLIDPYNGQRDLNQR 120 Query: 120 LLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 LRHVS AF EDPLRVLRVARFAA+ A+L FRI ET +M+ M EL L+PER+WK Sbjct: 121 WLRHVSEAFCEDPLRVLRVARFAAQLAYLNFRIVPETRLMMQHMI--SELPLLSPERIWK 178 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMA 239 ETE AL TR+PQ++FQVLRDCGAL+ LFPEIDALFGVPAPAKWHPEIDTGIHT+MT++MA Sbjct: 179 ETEKALATRDPQIYFQVLRDCGALKTLFPEIDALFGVPAPAKWHPEIDTGIHTMMTVAMA 238 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 A LS + VRFA+LCHD+GKGLTP + WP HHGHGPAG+ LV+ LCQRLRVPN IR+LA Sbjct: 239 ARLSDSIAVRFASLCHDIGKGLTPRDHWPSHHGHGPAGIPLVQSLCQRLRVPNSIRNLAI 298 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 +V E+HDL+H L PKT++KLF +ID WR+P+R+EQ+ + SEAD RGR G+E+ Y Sbjct: 299 IVTEYHDLLHYAVKLKPKTLIKLFYAIDVWRRPERLEQIIIISEADARGRAGYENHFYKP 358 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 G+++REA+ +A S+ V+ G +I E+L + R A+A+WK+Q Sbjct: 359 GQFIREAYRIASSIMPCQVISHNLTGNKIGEKLRQYRQQAIATWKQQ 405 >UniRef50_Q65Q41 Phosphatase n=50 Tax=Gammaproteobacteria RepID=CCA_MANSM Length = 419 Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust. Identities = 244/415 (58%), Positives = 308/415 (74%), Gaps = 5/415 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ YLVGGAVRD LL LPVKDRDWVVVG+TP+++L GYQQVGRDFPVFLHP+T EEYAL Sbjct: 1 MQTYLVGGAVRDQLLNLPVKDRDWVVVGATPEQLLSLGYQQVGRDFPVFLHPKTKEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG+GYTGF C +P ++LE DL RRDLTINA+AQD+ G+ IDPY G+ DL+NR Sbjct: 61 ARTERKSGAGYTGFICDFSPHISLEQDLIRRDLTINAIAQDNQGKFIDPYEGISDLKNRT 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH+SPAF EDPLRVLRVARFAARY L F IA ET+ALM E+T GEL+ LT ERVW+E Sbjct: 121 LRHISPAFAEDPLRVLRVARFAARYHQLDFSIAPETIALMAEITEKGELQQLTIERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 TE AL +NP+++FQVL GAL++LFPE+ AL+GVP PA++HPEID+ +HT++ L A Sbjct: 181 TEKALKEKNPEIYFQVLLQVGALKILFPELYALYGVPNPAQYHPEIDSFLHTMLVLQQAV 240 Query: 241 MLSPQVD-----VRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 L+ + VRFA +CHDLGK LTP ++ P H+GH AG++ + L RL+VP + Sbjct: 241 RLTENTEFNKSAVRFAAICHDLGKALTPKDILPHHYGHEKAGIQPIRTLSNRLKVPTYYK 300 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 +LA E+H IH L P+T++KLF+ +D WRKPQR E+L L AD RGRTGFE Sbjct: 301 ELAEFTCEYHSYIHKAFELKPETVIKLFNKLDVWRKPQRFEELMLVCVADTRGRTGFEQT 360 Query: 356 DYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPK 410 YPQ +LR+ ++ A V + V+E GF+ IR+ELTRRR AV + K + P+ Sbjct: 361 AYPQKDYLRQLYQTALQVNVQQVIEDGFEKQGIRDELTRRRTIAVKTKKAEILPR 415 >UniRef50_C6N613 tRNA nucleotidyltransferase n=2 Tax=Legionella RepID=C6N613_9GAMM Length = 425 Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust. Identities = 216/408 (52%), Positives = 275/408 (67%), Gaps = 6/408 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK+YLVGGAVRD LL LPVK+RDWVVVG++P+++L ++QVGRDFPVFLHPQT+EEYAL Sbjct: 16 MKVYLVGGAVRDQLLNLPVKERDWVVVGASPEQLLKQKFRQVGRDFPVFLHPQTNEEYAL 75 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKS GY GF C VTLE+DL RRDLTINA+A D+ G +IDPY G DL NR+ Sbjct: 76 ARTERKSAPGYYGFACDFNRSVTLEEDLARRDLTINAMAMDEQGVLIDPYQGQRDLANRV 135 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH+SPAF EDP+RVLR+ARFAAR+ +LGF +A+ET +LM M GEL HL ERVW+E Sbjct: 136 LRHISPAFAEDPVRVLRLARFAARFHYLGFTVAEETRSLMYSMVTQGELAHLVAERVWQE 195 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 + +L +NP+ F LR C ALRV+ PE+ ALFGVP P ++H EID+G+HTL+ L AA Sbjct: 196 WQRSLEEKNPEQFIITLRSCDALRVILPELQALFGVPNPYRYHHEIDSGVHTLLVLQSAA 255 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 L+ +RFA L HDLGK +P WP H+GH GV ++E LC RLR+PNE R LA + Sbjct: 256 ALTTDPIIRFAALTHDLGKATSPMSNWPSHYGHEARGVPIIESLCLRLRIPNEYRTLATV 315 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 V+ FH +IH L TIV+L + A+R+PQ + + +AD G G E DY Q Sbjct: 316 VSRFHLMIHRLLELRADTIVRLLEQAYAFRRPQLFYNMLIACQADAEG-CGRE-IDYQQS 373 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV----ASWK 404 V + ++ G+ G I+ L + R+A V SWK Sbjct: 374 ALWHHLLAECAKVNVQTIITQGYTGGAIKHALHQHRVACVELILNSWK 421 >UniRef50_A6FG51 Putative tRNA nucleotidyltransferase n=1 Tax=Moritella sp. PE36 RepID=A6FG51_9GAMM Length = 386 Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/406 (53%), Positives = 271/406 (66%), Gaps = 20/406 (4%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IYLVGGAVRD LL LPVKD+D+VVVG+TP EML GYQQVG+DFPVFLHP + +EYAL Sbjct: 1 MQIYLVGGAVRDKLLSLPVKDKDFVVVGATPAEMLAQGYQQVGKDFPVFLHPNSKQEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSGSGYTGFTCYAAPDVTLE DL RRDLTINA+ +D++G +IDP N DL NRL Sbjct: 61 ARTERKSGSGYTGFTCYAAPDVTLEQDLVRRDLTINAMVEDEHGHVIDPLNARLDLDNRL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH+S +F EDPLRVLRVARFAAR+ LGF IA ETL LM+EMT AG+L LTPERVW+E Sbjct: 121 LRHISESFSEDPLRVLRVARFAARFHQLGFTIAKETLTLMQEMTQAGDLAELTPERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E L+ NP+VFFQVLR+ GAL V+ PE+DALF + + G L L +A Sbjct: 181 VEKTLSADNPEVFFQVLREIGALAVILPELDALFNLAVKNSENDSTSIGQQALTQLKQSA 240 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 LS + VRFA L L HH ++ L +R +VPNE RDLA Sbjct: 241 SLSTDLAVRFAALMQQLD-----------HHQIS------IKALAKRCKVPNEHRDLALQ 283 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 V+ + IH L+P I++LFD+ DAWRKP R +Q+ LT + + DY Sbjct: 284 VSAQQENIHNARSLDPADIIRLFDNTDAWRKPARFQQILLTCASSQVSKL---VDDYQPT 340 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 ++L A + + ++ AGF+G EI+++LT +RIAA+ + Q Sbjct: 341 QYLTTMLNAACDIAVQPIIAAGFRGAEIKQQLTTQRIAALTLLRSQ 386 >UniRef50_A3NQD4 Phosphatase n=74 Tax=Bacteria RepID=CCA_BURP0 Length = 413 Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust. Identities = 218/410 (53%), Positives = 277/410 (67%), Gaps = 11/410 (2%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIY VGGA+RDALLGLPV+DRD+VVVG+TP++M ++ VG+DFPVFLHP THEEYAL Sbjct: 1 MKIYAVGGAIRDALLGLPVRDRDYVVVGATPEQMAAQRFRPVGKDFPVFLHPDTHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN------GEIIDPYNGLG 114 ARTERK+ +GY GF Y APDVTLE DL RRDLTINA+A++ + G ++DP+ G Sbjct: 61 ARTERKTAAGYHGFQFYYAPDVTLEQDLVRRDLTINAMAREVSPDGALVGPVVDPFGGQA 120 Query: 115 DLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 DL+ +L RHV AF EDP+R+LRVARFAAR+A F +A +T ALMR M AGE++ L P Sbjct: 121 DLRAKLFRHVGDAFVEDPVRILRVARFAARFAE--FAVAPDTAALMRAMVDAGEVDALVP 178 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ERVW+E L P F VLR+CGAL + PEIDALFGVP A +HPE+DTG+H +M Sbjct: 179 ERVWQELARGLMEAKPSRMFAVLRECGALARILPEIDALFGVPQRADYHPEVDTGVHVMM 238 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + AA + VRFA L HDLGK TP ++ PRH GH V L++ LC+RLRVPNE Sbjct: 239 VIDHAAKQGYSLAVRFAALTHDLGKATTPADVLPRHIGHEGRSVDLLKPLCERLRVPNEC 298 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 RDLA +VA H +H + +V+L + DA RKP R + SEAD RGR G E+ Sbjct: 299 RDLALVVAREHGNLHRVMEMGAAALVRLLERADALRKPARFAEALQASEADARGRLGLET 358 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEAGFKG--VEIREELTRRRIAAVAS 402 YPQ LR+A A++V A+ + G G +I++ + R R+ AVA Sbjct: 359 KPYPQAERLRQALVAARAVDAGAIAQ-GLAGEPAKIKDAVHRARVRAVAQ 407 >UniRef50_A1W3D0 Phosphatase n=492 Tax=cellular organisms RepID=CCA_ACISJ Length = 425 Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust. Identities = 221/423 (52%), Positives = 277/423 (65%), Gaps = 13/423 (3%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IY+VGGAVRD LLG PV D DWVVVG+TP +M+ GY VGRDFPVFLHP+T EEYAL Sbjct: 1 MQIYMVGGAVRDRLLGRPVNDHDWVVVGATPDDMVARGYLPVGRDFPVFLHPETREEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD----DNGEIIDPYNGLGDL 116 ARTERKSG GY GF +PDVTLE+DL RRDLTINA+A ++ DPY G DL Sbjct: 61 ARTERKSGRGYRGFVVQTSPDVTLEEDLSRRDLTINAIAASAAWTGAEDLFDPYGGARDL 120 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 Q R+LRHV+ +F EDP+R+LRVARFAAR+ F +A ET+ LMREM H GE +HL PER Sbjct: 121 QARVLRHVTDSFREDPVRILRVARFAARFT--DFTVAPETMQLMREMVHDGEADHLVPER 178 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 VW+E L P F VLRDCGAL V+ PE++ L+GVP ++HPE+DTG+H +M L Sbjct: 179 VWQELARGLMEPQPSRMFDVLRDCGALAVVLPEVERLWGVPQRPEYHPEVDTGVHLMMVL 238 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 MAA L + VRFA L HDLGKG TP ++ PRH GH +L++ +C+RLRVP E R+ Sbjct: 239 DMAAHLQAPLTVRFACLTHDLGKGTTPHDVLPRHIGHEQRSARLLKAVCERLRVPVECRE 298 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 LA +VA H IH L +V+L + DA RKP R++++ L E D RGR GF Sbjct: 299 LADVVAREHGNIHRSGDLGAAALVRLLERCDAIRKPARLDEILLACECDARGRLGFADRP 358 Query: 357 YPQGRWLREAWEVAQSVPTKAV----VEAGFKGVEIREELTRRRIAAVASW---KEQRCP 409 YPQ + A QSV T +V + G G ++ E + R+ AVA W Q P Sbjct: 359 YPQRARINAALAAVQSVTTSSVAAHAAQLGLSGPKVGEMIHAARVQAVADWLHATAQPAP 418 Query: 410 KPE 412 +P+ Sbjct: 419 EPQ 421 >UniRef50_Q7U350 CCA-adding enzyme n=2 Tax=Candidatus Blochmannia RepID=CCA_BLOFL Length = 411 Score = 417 bits (1071), Expect = e-115, Method: Compositional matrix adjust. Identities = 194/407 (47%), Positives = 269/407 (66%), Gaps = 3/407 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD+LL LP+ ++DWV+ GS+ QEML GY+QVG+DFPVFLHP++HEEYAL Sbjct: 1 MKKYLVGGAVRDSLLNLPITEKDWVITGSSAQEMLSIGYEQVGKDFPVFLHPKSHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK GSGYTGF C+ P +T+E+DL RRDLTINA+A D NG ++DPYNG D+Q RL Sbjct: 61 ARTERKLGSGYTGFICHTEPSITIEEDLYRRDLTINAMAYDMNGNLLDPYNGQKDIQLRL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRVLRVARFAA+ ++GF IA ET +M M H EL+ L+PERVW E Sbjct: 121 LRHVSNAFYEDPLRVLRVARFAAKLKNIGFTIAIETFEIMTHMIH--ELKSLSPERVWME 178 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI-DTGIHTLMTLSMA 239 T+ AL T NPQV+FQVL+ CGAL++LFPE+D LF +P H + + G T+ LS Sbjct: 179 TKKALITDNPQVYFQVLKKCGALKILFPELDILFTIPQCTTHHSNLMNLGNQTMTRLSNI 238 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 + LS + +R+A LC +LG + P + + + ++ LC RL+VPN I L + Sbjct: 239 SCLSNDLAIRYAILCCNLGSEMNPRKQPLKQLTQKKPQISIINNLCNRLKVPNNILKLTK 298 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 +V ++ ++ L+ + I+ +F + D WR P R+E + +++ + G + + Q Sbjct: 299 IVFMYYHDLYDVTKLSSEMIMTIFQAFDCWRTPTRIELIIKINQSQLLGSKFHINYLFFQ 358 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 LR A+ + ++ +GF G+ I +EL RR+ + WK + Sbjct: 359 STLLRTAFNETTQIKANDIINSGFSGINISQELYSRRLHVLKHWKNK 405 >UniRef50_A8PL05 Multifunctional CCA protein n=1 Tax=Rickettsiella grylli RepID=A8PL05_9COXI Length = 399 Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust. Identities = 200/403 (49%), Positives = 264/403 (65%), Gaps = 8/403 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IYLVGGAVRD LLG P+K+RD+VVVG++P EML G++ +G+DFPVFLHPQTHEEYAL Sbjct: 1 MEIYLVGGAVRDQLLGFPIKERDYVVVGASPAEMLKQGFRLIGKDFPVFLHPQTHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK G GY GF+CYAAPDVTLE+DLKRRDLTINALAQ +NGEIIDP+ G D++N+L Sbjct: 61 ARTERKIGPGYKGFSCYAAPDVTLEEDLKRRDLTINALAQTNNGEIIDPFQGQKDIENKL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDP+R+LRVARF AR++ GFR+A ET+ALM+ M GE+ L PERVW+E Sbjct: 121 LRHVSPAFSEDPVRILRVARFMARFSSFGFRVAKETMALMKMMVSMGEVHALVPERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 ALT +PQ F + L DCGAL VLFPE+ L A K H + + H L L A Sbjct: 181 FSIALTEPSPQAFIKTLEDCGALAVLFPELYELHTHDASIKVHSQQLSPPHYLSVLEKAV 240 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +L+ +VRFA L DLGKG+ E GV+ + LCQR R+P+ LA + Sbjct: 241 LLTSDPEVRFAALLCDLGKGVANEETQK--------GVQKIRSLCQRYRIPHAYASLAMM 292 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 A +H L H L ++ L + +A ++ ++Q L EAD R +G + Y Q Sbjct: 293 AAAYHLLCHRALALEASSLYHLLEKTNALKQSSCLDQFLLVCEADFRAYSGLDHRVYLQR 352 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASW 403 + A E+ + + + ++G G + ++L RI A++ + Sbjct: 353 ERVLAAVEIVKKISASELKKSGLMGAALGKKLREHRIQALSDF 395 >UniRef50_A6VN94 CCA-adding enzyme n=4 Tax=Pasteurellaceae RepID=CCA_ACTSZ Length = 400 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 204/409 (49%), Positives = 263/409 (64%), Gaps = 16/409 (3%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M IYLVGGAVRD LL LPVKDRDW+VVGSTP E+L GY QVG+DFPVF+HP+THEEYAL Sbjct: 1 MNIYLVGGAVRDQLLHLPVKDRDWLVVGSTPDELLSLGYLQVGKDFPVFIHPETHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE+KSGSGYTGF C +PD+TLEDDL RRDLTINA+AQD NG++ DPY+G+ DL NRL Sbjct: 61 ARTEKKSGSGYTGFICDFSPDITLEDDLIRRDLTINAIAQDKNGKLYDPYHGIEDLNNRL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH+SP+F EDPLRVLRVARFAA++ HLGF IA ETL LM++++ GEL+HLT ERVW E Sbjct: 121 LRHISPSFEEDPLRVLRVARFAAKFYHLGFAIAPETLELMKKLSTQGELQHLTAERVWLE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 TE AL T NP+++FQ L AL L PE+ + ++ + + L A Sbjct: 181 TEKALMTENPEIYFQTLLKIDALPALMPELATI-----------SVENFQYAMTALKNAV 229 Query: 241 MLSPQVDVRFATLCHD---LG-KGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 L +D + +C LG + P + + + L ++L+VP ++ Sbjct: 230 SLIKNMDCNKSAVCFATIFLGIIYVNPSHMTQKQQEQDNHQKNITPCLFEKLKVPAYHKE 289 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 LA L ++H IH L TI+ LF+ D WRKPQR +L + A ++ Sbjct: 290 LAILAGKYHIYIHNAFNLKSHTIIDLFNKWDVWRKPQRFLELLIVCAAHYSAQSK-NQPT 348 Query: 357 YPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKE 405 YPQ +L ++ A ++ K +V AGFK EIR ELTR+RI+AV K Sbjct: 349 YPQKSYLLGLYQKAMTIDVKNIVSAGFKKTEIRNELTRQRISAVEKIKN 397 >UniRef50_Q125I3 Metal dependent phosphohydrolase n=2 Tax=Proteobacteria RepID=Q125I3_POLSJ Length = 462 Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust. Identities = 216/453 (47%), Positives = 275/453 (60%), Gaps = 54/453 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IY+VGGAVRDAL+GL V+D DWVVVG+TP++++ GYQ VG+DFPVFLHP+T EEYAL Sbjct: 1 MQIYMVGGAVRDALMGLAVQDHDWVVVGATPEDLVAQGYQPVGKDFPVFLHPETREEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA--------------------- 99 ARTERK+ GY GF +A P VTLE DL RRDLTINA+A Sbjct: 61 ARTERKTARGYRGFVVHADPGVTLEQDLARRDLTINAIAAPARSTGAAAGAAARPGAALN 120 Query: 100 ---QDDNGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADET 156 D +IDPY G D+++++LRHV+ AF EDP+R+LR+ARFAAR+A F +A ET Sbjct: 121 TDFDADFDALIDPYGGQKDIRDKVLRHVTEAFREDPVRILRLARFAARFAD--FSVAPET 178 Query: 157 LALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGV 216 LALMR+M GE++ L PERVW+E L P F VLRDCGAL L PE+ L+GV Sbjct: 179 LALMRDMVTEGEVDALVPERVWQELARGLMEDKPSRLFDVLRDCGALHRLLPEVARLWGV 238 Query: 217 PAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT-------------- 262 P A+ HPE+DTG+H +M + MAA L + VRFA LCHDLGKG T Sbjct: 239 PQRAEHHPEVDTGVHLMMVMDMAAQLQASLPVRFACLCHDLGKGTTRAPDAGMSTPGEPP 298 Query: 263 PPELW----------PRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFP 312 PPE W RH GH +L++ +C+RLRVP + R+LA +VA H IH Sbjct: 299 PPEFWREKMASDPQLGRHIGHEERSARLLKDVCERLRVPVDCRELADVVAREHGNIHGSA 358 Query: 313 MLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQS 372 +V+L + DA+RKP+R ++ L E D RGR G+E + YPQ L EA AQS Sbjct: 359 AFGAAAVVRLLERCDAFRKPRRFAEVLLACECDARGRLGYEHSPYPQRPRLLEALAAAQS 418 Query: 373 VPTKAVVEAGFKGV----EIREELTRRRIAAVA 401 V T V +I E + + R+AAV Sbjct: 419 VATHQVAADAQAAGQDGRQIGELIHQARVAAVG 451 >UniRef50_B8D8L9 CCA-adding enzyme n=4 Tax=Buchnera aphidicola RepID=CCA_BUCA5 Length = 414 Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust. Identities = 194/407 (47%), Positives = 259/407 (63%), Gaps = 6/407 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIYLVGGAVRD+LL LPVKD+DWVVVG T + +L+ +QQVG+DFPVFLHP+THEEYAL Sbjct: 1 MKIYLVGGAVRDSLLNLPVKDKDWVVVGGTEKILLERNFQQVGKDFPVFLHPETHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR ERKSG GYTGF DVTLE+DL RRDLTINA+AQD+ G IDP+ G D++ L Sbjct: 61 ARKERKSGKGYTGFDTDCNSDVTLEEDLIRRDLTINAIAQDEYGNYIDPFQGKKDIECGL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 +RHVS +F EDPLRVLRVARFAA HLGF+IA+ET+ LM + EL +LT R+W E Sbjct: 121 IRHVSESFIEDPLRVLRVARFAATLVHLGFKIAEETMLLMCIIVKKQELSYLTSNRIWNE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALF---GVPAPAKWHPEIDTGIHTLMTLS 237 TE AL T NP V+FQVL +C AL FPE+ L+ + + + I LM L+ Sbjct: 181 TEKALKTLNPHVYFQVLYECNALHFFFPEMYFLYEKKNFLNRSFFKKFCNKNI-ILMGLA 239 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 ++L+ +DVRF+ LC L A + + +C+R ++P+ IRD+ Sbjct: 240 EISLLNKDIDVRFSYLCQFLSVNQIDRNYSKIFFDSYAASI--IHSVCKRFKIPSYIRDI 297 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY 357 A L F+ ++T + K I+ LF +DAWRKP RV++LA S + E Sbjct: 298 AVLNTGFYFFLNTIHYQSSKNIINLFSKVDAWRKPDRVKKLAFLSNFNFLRNFKSEFFCI 357 Query: 358 PQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWK 404 G +L + + V ++V K +++ GFKG EI++E+TR RI + W+ Sbjct: 358 KSGCFLEKCFSVVKNVSIKLILKKGFKGYEIKQEITRLRIKKLEFWR 404 >UniRef50_Q8D2W4 CCA-adding enzyme n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=CCA_WIGBR Length = 403 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 172/396 (43%), Positives = 265/396 (66%), Gaps = 5/396 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD LL +P+K++DWVVV STP+EM+ GY+ VG+ FPVFLHP++HEE+AL Sbjct: 1 MKKYLVGGAVRDGLLNMPIKEKDWVVVESTPEEMIKLGYKPVGKSFPVFLHPKSHEEHAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK+G GY GF Y + +TLE+DLKRRDLTINA+A+D NG +IDPY G+ DL + Sbjct: 61 ARTERKNGYGYKGFKLYTSSKITLEEDLKRRDLTINAIAKDKNGNLIDPYGGIKDLYEKK 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 L+H+S +F EDPLRVLR ARFAA HL F I +TL +M EM EL + ER+W E Sbjct: 121 LKHISNSFKEDPLRVLRTARFAAYLFHLNFFIDSKTLKIMSEMI--DELFFIPVERIWLE 178 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 T+ AL RNP V+F+VL CGAL+ +FPEI+ LF + + ++ I+ G TL L ++ Sbjct: 179 TKKALLCRNPHVYFKVLLKCGALKKIFPEIENLFHIKSF--YNKNINLGSLTLRALYESS 236 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 ++S ++ +RF+ LCH+ K + + G ++ ++C+RL++ NEI+ L+++ Sbjct: 237 LISNEIKIRFSMLCHNFDK-FNSNNKKNSFYCNKINGNLILNKICKRLKLSNEIKKLSKI 295 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + HD ++ ++ K ++K + I+AW+ P+ ++ L + S++ + + + Q Sbjct: 296 ALDHHDTLYKIFFISAKMVIKFLNDINAWKNPKIIDDLIIISKSYGISIGYKKKSMHKQE 355 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRR 396 ++++ ++ S+ TK +++ GF G+ I++EL +RR Sbjct: 356 KFIKNLYKKLNSIKTKDIIKDGFIGINIKKELMKRR 391 >UniRef50_Q058D0 CCA-adding enzyme n=2 Tax=Buchnera aphidicola RepID=CCA_BUCCC Length = 414 Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust. Identities = 177/409 (43%), Positives = 261/409 (63%), Gaps = 4/409 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVG-STPQEMLDAGYQQVGRDFPVFLHPQTHEEYA 59 MKIYLVGGA+RD LL +PV+DRDWVVVG P+EML YQQVG+ FPVF+HP+THEEY+ Sbjct: 1 MKIYLVGGAIRDRLLNIPVRDRDWVVVGIRDPKEMLKKNYQQVGKGFPVFIHPKTHEEYS 60 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 LARTE+K+G G+TGF + +TL++DLKRRDLTINA+AQD +G+IID +NG D+Q + Sbjct: 61 LARTEKKNGVGHTGFLFDFSSRITLKEDLKRRDLTINAIAQDSSGKIIDFFNGKKDIQKK 120 Query: 120 LLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 +LRHVS +F EDPLRVLR+ARFAA +HLGF IA +TL+LM+ + EL +LTPER+WK Sbjct: 121 ILRHVSYSFQEDPLRVLRIARFAALLSHLGFYIAKKTLSLMKLICSRKELLYLTPERIWK 180 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALF-GVPAPAKWHPEIDTGIHTLMTLSM 238 ET+ L+T+NP V+FQVL C AL LFPEI+ + + I+ ++L+ LS Sbjct: 181 ETQKGLSTQNPHVYFQVLYSCNALFFLFPEINYFYKKTYFLNSFIKHINLVQYSLIELSK 240 Query: 239 AAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLA 298 + ++ +++RF+ P + + + L++++ RL++P E ++ Sbjct: 241 ISKVTKDINIRFSYFLQFFYYVYPIPNIGTKDYFFYKKPAFLLKKMLIRLKIPKETSEII 300 Query: 299 RLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYP 358 + FH+ + + + K I+K F+ ID WRKP R+ QL + + D+ Sbjct: 301 FFLCGFHNFLQNINIQSSKLIIKFFNIIDVWRKPNRLNQLIYLDFYNFNSLKN-KKNDFF 359 Query: 359 QGRWLREAWEVAQSVPTKAVV-EAGFKGVEIREELTRRRIAAVASWKEQ 406 G+ L+ + + + + + + E FKG+EI+ +L R RI + KE+ Sbjct: 360 LGKLLKYMFSLIKDISVCSFIKEKKFKGIEIKNDLNRLRIQSFKEMKEK 408 >UniRef50_Q1IG27 CCA-adding enzyme n=7 Tax=Gammaproteobacteria RepID=CCA_PSEE4 Length = 375 Score = 363 bits (933), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 203/406 (50%), Positives = 261/406 (64%), Gaps = 35/406 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IY VGGAVRD LLG PV D DW+VVG+T ++M G++ VG DFPVFLHP+T EEYAL Sbjct: 1 MQIYKVGGAVRDRLLGRPVSDVDWLVVGATVEQMQAQGFRPVGADFPVFLHPKTGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GY GFT +A+PDVTLE+DL RRDLTINA+A+D++G++ DPY+G DL R+ Sbjct: 61 ARTERKSGRGYGGFTFHASPDVTLEEDLIRRDLTINAMAEDEHGDLHDPYHGKTDLDQRI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRVLRVARFAARYA +GFR+ADETL LMR+++ +GEL LT ER WKE Sbjct: 121 LRHVSLAFAEDPLRVLRVARFAARYAPMGFRVADETLELMRQISASGELLALTAERSWKE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E AL PQVF +VLR CGAL+ L PE+DALF H E+ G H L L AA Sbjct: 181 IERALMEDQPQVFIEVLRACGALKELMPEVDALF--------HGEVSQGSHALDVLQQAA 232 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + VR+A L LG K ++ + QR + P E ++LA L Sbjct: 233 AQQQPLAVRWACLLLALGG-------------------KQIKTVNQRFKAPRECQELAIL 273 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQL--ALTSEADVRGRTGFESADYP 358 V EFH+ H L P+ ++ L D +R+PQR E+ A +A + GR DYP Sbjct: 274 VGEFHEQGHRAMELAPEMLLDLLQKFDVYRRPQRFEEFIEACRMDALLGGR------DYP 327 Query: 359 QGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWK 404 Q +LR A A++V K ++E+G G + L R++A+ ++K Sbjct: 328 QSEYLRGAAATARAVDVKPLMESGLTGQALGGALKAARLSALQAYK 373 >UniRef50_Q3IK69 tRNA nucleotidyl transferase n=2 Tax=Alteromonadales RepID=Q3IK69_PSEHT Length = 416 Score = 353 bits (906), Expect = 7e-96, Method: Compositional matrix adjust. Identities = 188/408 (46%), Positives = 256/408 (62%), Gaps = 12/408 (2%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 ++YLVGGAVRD LL D D+VV+G TPQ M G+ +G DFPV+LHP+T EEYAL Sbjct: 7 QVYLVGGAVRDLLLKRASNDNDYVVIGETPQTMEALGFVPIGSDFPVYLHPKTKEEYALG 66 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 RTERKSG GYTGF A+PDVTLE+DL RRDLTIN++A D N IIDP+NG DL++++L Sbjct: 67 RTERKSGKGYTGFVVDASPDVTLEEDLARRDLTINSMALDANDNIIDPFNGQQDLKDKIL 126 Query: 122 RHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKET 181 RH + AF EDP+RVLR+ARF AR+ +RI T ALM+++ GEL HL PERVW ET Sbjct: 127 RHTTDAFVEDPVRVLRIARFLARFGS-EWRIHPSTYALMQQLKQQGELNHLVPERVWLET 185 Query: 182 ESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAM 241 E AL ++P+++FQ L+ G +FPE++ + VP P + HPE D +HT++ L AA Sbjct: 186 EKALGEKHPELYFQALQGLG----IFPELEKMVNVPQPKQHHPEGDVFVHTMLVLRRAAD 241 Query: 242 LSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLV 301 L+ + RFA L HD GK ++ + GH GV +VEQ C+RL++PN RD+ L Sbjct: 242 LNFDLATRFAALTHDFGKAISFKKRG-NLRGHERDGVAVVEQFCERLKIPNCFRDIGVLT 300 Query: 302 AEFHDLIHTFPMLNPKTIVKLF-DSIDAWRKPQRVEQLALTSEADVRGR-TGFESADYPQ 359 ++ H L HT L P+T+ KL +++A PQR + D +GR YPQ Sbjct: 301 SDNHTLCHTLEQLRPETVHKLIVTNLNALVHPQRFIAFTQACQCDAQGRGETLVDKPYPQ 360 Query: 360 GRWLR----EAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASW 403 LR E ++ + +A + +G KG EI EE+ + I V ++ Sbjct: 361 AAKLRAIHAELLKLDKKQVVQAALNSGKKGPEIGEEVKQAEINCVKAF 408 >UniRef50_A0Y839 TRNA nucleotidyltransferase, putative n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y839_9GAMM Length = 367 Score = 332 bits (851), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 183/401 (45%), Positives = 243/401 (60%), Gaps = 45/401 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD LLG P +RDWVVVG+T +++++ GYQ VG+DFPVFLHP+T EEYAL Sbjct: 1 MKNYLVGGAVRDKLLGYPYVERDWVVVGATAEQLINLGYQPVGKDFPVFLHPKTKEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GYTGF CYA+P+VTLE+DL+RRDLTINA+A+DD+G +IDPY G DL + Sbjct: 61 ARTERKSGPGYTGFDCYASPEVTLEEDLQRRDLTINAIAEDDDGTLIDPYGGQQDLDKGI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLR+LRVARF+ARYAHLGF +ADETL LM++++ + EL L ERVWKE Sbjct: 121 LRHVSPAFEEDPLRILRVARFSARYAHLGFTLADETLLLMKKISASDELLALPAERVWKE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 +L+ R+P +FF L+ C AL+ L PE+D F HT++ A Sbjct: 181 MHRSLSERSPDIFFVTLQQCDALKKLMPELDESF----------------HTIIEPLKQA 224 Query: 241 MLSPQVDV-RFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 +S DV FA L + T E CQR++ P E RDLA Sbjct: 225 AISGLPDVICFAILFAHIDTVET-------------------ENFCQRMKAPREFRDLAI 265 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 LV+ F + +P ++ L +S+D +R+P+R + + Sbjct: 266 LVSRFS-ISCKDDFSSPDQLLTLLESLDPFRRPERFGLFLQSVQLLYNNDRAINQ----- 319 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 ++++ +S+ ++ G KG EI E L RRI A+ Sbjct: 320 ---MKKSLRACKSIDAASLAREGLKGKEIAEALRSRRIEAM 357 >UniRef50_Q2BK09 TRNA nucleotidyl transferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BK09_9GAMM Length = 370 Score = 331 bits (848), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 177/397 (44%), Positives = 241/397 (60%), Gaps = 41/397 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIYLVGGAVRD LL PV D+DWVVVGS+P+EM+++GYQ VG+DFPVF+HP+T EEYAL Sbjct: 1 MKIYLVGGAVRDKLLNYPVYDKDWVVVGSSPEEMIESGYQPVGQDFPVFIHPETGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE KSG GYTGF +A +VTLE+DL RRDLTINA+A D+ G ++DPY+G DL +R+ Sbjct: 61 ARTEMKSGKGYTGFNYFADKNVTLEEDLVRRDLTINAMAMDEQGSLVDPYDGQKDLADRI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLRVLRVARFA+RY HLGFR+A ETL LM+E+ ELEHLT ERVWKE Sbjct: 121 LRHVSPAFSEDPLRVLRVARFASRYNHLGFRVAQETLNLMQELALTDELEHLTTERVWKE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E ALT ++P VF +L A + + PE+++ W Sbjct: 181 FERALTEKSPWVFLSILHQTKASKKVLPELESWLDTD---NWQS----------IFRNCC 227 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +S + D+RFA L A +K V C RLR ++L Sbjct: 228 EVSKEADIRFACL-------------------STLADLKNVPAFCDRLRTQKATKELTMQ 268 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 A+ L+ TF +T +++ +D +R+PQR+E++ +A R + Sbjct: 269 CADHSALLSTFDSQPAETKLEILQGLDLFRRPQRLEKILSCVKALYREHS---------T 319 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRI 397 + L+ + + K +++ G+KG + +ELT+R++ Sbjct: 320 QSLQPILDEISKIDPKQLIKEGYKGAALGKELTQRKL 356 >UniRef50_Q5QY23 CCA-adding enzyme n=1 Tax=Idiomarina loihiensis RepID=CCA_IDILO Length = 370 Score = 328 bits (840), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 180/396 (45%), Positives = 238/396 (60%), Gaps = 35/396 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M +YLVGGAVRD LL LPV +RDWVVVG+ +++L G+ QVG+DFPVFLHP T EEYAL Sbjct: 1 MDVYLVGGAVRDKLLKLPVHERDWVVVGARAEDLLKQGFLQVGKDFPVFLHPSTREEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG G+T F +A+PDVTLEDDL RRDLTINA+AQ ++GEI+DPYNG+ D++ R Sbjct: 61 ARTERKSGKGHTSFDVFASPDVTLEDDLARRDLTINAIAQSEDGEIVDPYNGVQDIKARK 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRVLRVARFAAR+AHL F +A+ET +++EM+ + EL HL PERVW+E Sbjct: 121 LRHVSEAFTEDPLRVLRVARFAARFAHLDFTVAEETQQMLQEMSASQELSHLVPERVWRE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E +L T+ P VF +LRD AL + P I A L L + Sbjct: 181 WEKSLLTQTPTVFLTLLRDIQALSQVLPGITA----------------DDSQLQRLQRTS 224 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 S V +RFA+L + TP L +Q C++L +PN RD A L Sbjct: 225 AYSDSVTLRFASL---FIEQETPESL---------------KQFCRQLAIPNHYRDSALL 266 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 D I T + + L ID WR+P+++EQL +A+ + + + Q Sbjct: 267 ARNHEDFITTPELPEKAQLAALLKQIDYWRRPEKLEQLLQLRQAEY-SESKQQKSIAAQH 325 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRR 396 + LR E A ++ + + GF G + + L +R Sbjct: 326 KKLRSGAEKAAALNAGTLQQQGFTGKALGDALREQR 361 >UniRef50_B4RVV4 CCA-adding enzyme n=2 Tax=Alteromonas macleodii RepID=CCA_ALTMD Length = 397 Score = 326 bits (835), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 187/424 (44%), Positives = 243/424 (57%), Gaps = 46/424 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M++YLVGGAVRDALL V +RD+VVVG+TPQEML G+ QVG+DFPVFLHP+T EEYAL Sbjct: 1 MQVYLVGGAVRDALLNRKVIERDYVVVGATPQEMLSQGFTQVGKDFPVFLHPKTQEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GYTGF C A+ VTLE+DL RRDLT+NA+AQD+ G +IDPY G DL+N L Sbjct: 61 ARTERKSGKGYTGFVCDASSSVTLEEDLLRRDLTVNAIAQDNLGNLIDPYGGKKDLENHL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRV RVARFA RYA+LGF IA+ET+ALM+ M +GEL L+ ERVW+E Sbjct: 121 LRHVSEAFSEDPLRVFRVARFATRYAYLGFTIANETMALMQSMAESGELSTLSAERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 T+ +L + P VFF VL L F E+++ +D I TL T A Sbjct: 181 TKRSLLEKTPHVFFTVLNQAHGLNDWFAELES------------NLDAAIATLKT---AV 225 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKL-------------VEQLCQR 287 L F K L P G + + ++LC R Sbjct: 226 ALENAAKENFDKSGQLENKPLETK--IPESSSSGTTTLIIRFTALLAHLNEEEAKRLCNR 283 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 L+V N++ ++ L +F D + +P ++ LF+ DAWR+ +R L L + A Sbjct: 284 LKVQNQLSEIVILACKFKDFLLN-TQNSPADLLALFNGCDAWRRSERF-TLLLKAFAPY- 340 Query: 348 GRTGFESADYPQGRWLRE------AWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVA 401 A Y W R+ A A V + ++ G KG I+E L + ++ A+A Sbjct: 341 -------AHYKDLDWQRQQEHIENALSAANQVNVQDIIATGVKGPAIKEALNQAKLDAIA 393 Query: 402 SWKE 405 S E Sbjct: 394 SIGE 397 >UniRef50_A9KEZ9 CCA-adding enzyme n=6 Tax=Coxiella burnetii RepID=CCA_COXBN Length = 376 Score = 320 bits (821), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 179/400 (44%), Positives = 239/400 (59%), Gaps = 44/400 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +K+YLVGGAVRD LLGLPVK++DWVVVG+TP+EM G++ VG++FPVFLHP+THEEYAL Sbjct: 16 LKVYLVGGAVRDQLLGLPVKEKDWVVVGATPEEMTARGFKPVGKEFPVFLHPETHEEYAL 75 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK GY GFT YAAPDV+LE+DLKRRDLTINA+A+ G++IDPY G DL+N++ Sbjct: 76 ARTERKVAKGYKGFTFYAAPDVSLEEDLKRRDLTINAIAETPEGQLIDPYGGQEDLKNKV 135 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDP+RVLR+AR A ++ F I +TL LM++M AGE++ L PERVW+E Sbjct: 136 LRHVSVAFQEDPVRVLRLARLATKFPD--FSIHPDTLELMKKMVCAGEIDALVPERVWQE 193 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 AL P FF VL CGAL +LFPEI G+ L +++ Sbjct: 194 LNRALGNEKPTRFFTVLNQCGALAILFPEIKME-------------GKGMAALQSVTDK- 239 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +P +RFATL DL PPE ++++L R RVPNE DLA L Sbjct: 240 --TPSPLIRFATLQSDL-----PPE--------------IIQKLAGRYRVPNEYADLAIL 278 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 VA F ++ +++ DA R+ +R +Q T + S Q Sbjct: 279 VARFGSDYVNLNRMDETSLLNFLLKTDALRRQERFDQFIFTCDL-------ISSTTSSQP 331 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 + ++E + +SV K + E KG + L + R+ A+ Sbjct: 332 KKIKEIIKAVKSVDIKPLQEKQLKGEAFAKALEKLRLEAI 371 >UniRef50_A0Z6Y3 TRNA nucleotidyltransferase, putative n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z6Y3_9GAMM Length = 372 Score = 319 bits (817), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 178/402 (44%), Positives = 238/402 (59%), Gaps = 41/402 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIY VGGAVRD LLG P + DWVVVG TPQ ++D G++QVGRDFPVFLHP+T EEYAL Sbjct: 1 MKIYRVGGAVRDELLGYPHSETDWVVVGGTPQALVDQGFRQVGRDFPVFLHPETQEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GY GF +AAP VTLE+DL RRDLTINA+A DD+G ++DPY G DL+ + Sbjct: 61 ARTERKSGFGYHGFEVHAAPSVTLEEDLTRRDLTINAMAMDDDGVLVDPYGGKRDLEAKC 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSP F EDPLRVLRVARFAARY LGF +A+ETL LM + GEL HL ER+W E Sbjct: 121 LRHVSPHFVEDPLRVLRVARFAARYYALGFTVAEETLDLMSTIVAQGELGHLATERIWVE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 TE AL ++P+++F+ LR CGA+ L P + G+ LS AA Sbjct: 181 TERALGEQHPEIYFETLRQCGAMATLMPAVAVTSGIE-----------------RLSRAA 223 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + + D R+A L +L P + + + + PN+ RDLA Sbjct: 224 QFTNRTDCRWAILLSEL----------PSNQARATSEAR---------KAPNQFRDLAER 264 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + + + +P + L + +DA R+P+ + + A + T SA +P Sbjct: 265 LTTWRPQTKQ-ALRDPSECMSLLEGLDALRRPEPFDGFC-EAAAALESNT---SAKHPSC 319 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 L++A E A +V + ++E G G + + L R+AA+A+ Sbjct: 320 IALQQAKEAANTVKAQTLLETGLTGPALGKALRESRVAAIAA 361 >UniRef50_Q1QZ27 Polynucleotide adenylyltransferase region n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ27_CHRSD Length = 384 Score = 310 bits (793), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 181/403 (44%), Positives = 232/403 (57%), Gaps = 46/403 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 + +Y VGGAVRDA LG PV D DWVVVG+TP+ + G+ VGRDFPVFLHP THEEYAL Sbjct: 16 LDVYRVGGAVRDARLGWPVTDEDWVVVGATPEALTARGFVPVGRDFPVFLHPVTHEEYAL 75 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK G GYTGF +A+P+VTLE+DL RRDLTINA+A+D +G ++DP++G DL R+ Sbjct: 76 ARTERKQGHGYTGFVVHASPEVTLEEDLARRDLTINAMAEDRDGRLVDPFDGRQDLDARV 135 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRVLR ARF ARY LGF IAD+T LMR + GE+ HL ERVW+E Sbjct: 136 LRHVSEAFVEDPLRVLRTARFWARYRELGFVIADDTKRLMRGLCDNGEIAHLVAERVWQE 195 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 T AL +P +FQ L +CGAL V PE+DA + G + L Sbjct: 196 TVKALGEPHPMAYFQALHECGALAVWMPELDA----------SDMLARGEAAMARLPAGG 245 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 S R D + E LC+RLRVPN RDLAR Sbjct: 246 EPSQWRWARLLEALEDEAR----------------------EALCERLRVPNAWRDLARQ 283 Query: 301 VAEFHDL--IHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYP 358 VA L H L ++ FD+IDAWR+ +RV L + + + P Sbjct: 284 VARTRALQRQHGDGGLEGSDVMAWFDAIDAWRRSERVAPL-----------QRYLAMETP 332 Query: 359 Q-GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 + EAW+ A ++ +A++E G++G + + L +RR A + Sbjct: 333 ALAACVDEAWQAASAIQPQALLEEGYRGKALGDALAQRRQARI 375 >UniRef50_A1U5G5 CCA-adding enzyme n=3 Tax=Alteromonadales RepID=CCA_MARAV Length = 373 Score = 306 bits (784), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 179/403 (44%), Positives = 237/403 (58%), Gaps = 41/403 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ YLVGGAVRD LLGL VKDRDWVVVG+TP++M+ G++QVG DFPVFLHP T EEYAL Sbjct: 1 MQTYLVGGAVRDKLLGLGVKDRDWVVVGATPEDMIQRGFKQVGADFPVFLHPDTGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK G GY GF+ Y+APDV+LEDDL+RRDLTINA+A+ +NG+++DP+NG DL+ + Sbjct: 61 ARTERKQGRGYHGFSVYSAPDVSLEDDLRRRDLTINAMAETENGDLVDPFNGHADLEQKK 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLR+LR ARFAAR LGF I ET+ALMR+M +GEL L PERVW+E Sbjct: 121 LRHVSEAFAEDPLRILRTARFAARLQPLGFSICRETMALMRQMVTSGELGDLVPERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 + AL + P VFF VLR+ GAL+VL PE+ P G+ L + Sbjct: 181 VQRALHEQAPGVFFDVLRELGALQVLIPEL---------TDEQP-FRQGLSALQCIHRKQ 230 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + Q +A L G+ P+ R + ++ PN+ R+L L Sbjct: 231 GSTAQ---HYAALL----SGVPEPDAVAR---------------AKAMKSPNDCRELTHL 268 Query: 301 VAEFHDLIHTFP---MLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY 357 V F ++ L P+ ++L D D WR+P R L T + +S Sbjct: 269 VGLFMAQLNGASPETRLTPELAMELLDKADFWRRPDRFGVLLGTLACTL------QSEPD 322 Query: 358 PQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 + L A AQSV ++ G +G + E + + R+A + Sbjct: 323 HLIQQLELAAHRAQSVTPHPFLQKGIQGKALGEAIRKERVARI 365 >UniRef50_A6VU49 Polynucleotide adenylyltransferase region n=2 Tax=Marinomonas RepID=A6VU49_MARMS Length = 365 Score = 303 bits (777), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 178/399 (44%), Positives = 236/399 (59%), Gaps = 48/399 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 ++YLVGGAVRDALL LPV D DWVV G+TP+++ G+QQVG+ FPVFLHP + EEYALA Sbjct: 6 QVYLVGGAVRDALLELPVIDHDWVVTGATPEQLEKKGFQQVGKQFPVFLHPISKEEYALA 65 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 R E+K G GYTGF C +P+++LE+DL+RRDLTINA+AQD NG +IDP+NG DL +R+ Sbjct: 66 RKEKKQGEGYTGFICDFSPEISLEEDLERRDLTINAIAQDQNGTLIDPFNGQQDLLDRVF 125 Query: 122 RHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKET 181 RHVS AF EDPLRVLRVARFAAR+ H GF IA ET++LMRE++ +GEL L+ ER+WKE Sbjct: 126 RHVSNAFVEDPLRVLRVARFAARFHHFGFTIAPETMSLMREISSSGELSALSAERIWKEL 185 Query: 182 ESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAM 241 E AL TR+ VFF VL+D AL LFPE W M Sbjct: 186 EKALNTRHANVFFSVLKDANALDKLFPEF----------IWEDS-----------QMLTD 224 Query: 242 LSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLV 301 + QV GLTP + W + P + + QL QR+R PN+ + LA Sbjct: 225 ILNQV-------------GLTPAQRWAILCKNTP--LTELTQLHQRIRSPNQFKILAEQT 269 Query: 302 AEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGR 361 F + H PM + T S++A +KPQ L A + T + D+ + Sbjct: 270 RSFLENQH-IPM-DSTTWENWLISVNAIKKPQPFILLI----AILSRLTNSKVEDWQK-- 321 Query: 362 WLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 LR+ V + ++++ GF G E+ + L + R A+ Sbjct: 322 -LRDTIAV---INAASLIKQGFSGAELGQALKKVRTEAL 356 >UniRef50_A3WPG7 TRNA nucleotidyltransferase n=1 Tax=Idiomarina baltica OS145 RepID=A3WPG7_9GAMM Length = 366 Score = 299 bits (765), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 175/400 (43%), Positives = 230/400 (57%), Gaps = 43/400 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 + IYLVGGAVRD LLG PV D+D+VVVG+TP +ML GYQQVG+DFPVFLHPQT EEYAL Sbjct: 5 LDIYLVGGAVRDQLLGCPVGDKDYVVVGATPDQMLALGYQQVGKDFPVFLHPQTREEYAL 64 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK G GYTGF +TL DL+RRDLTINA+A+D++G +IDPY G D++ +L Sbjct: 65 ARTERKQGQGYTGFQVNTETTITLTQDLERRDLTINAIAEDEHGHLIDPYGGQQDIERKL 124 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLRVLRVARF AR+ LGF +A ET LM+ M +GEL+ L ERVW+E Sbjct: 125 LRHVSPAFVEDPLRVLRVARFYARFKPLGFTVAQETKNLMKAMARSGELKTLVAERVWRE 184 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E AL T P F + L EIDA V PE+ ++ L + Sbjct: 185 WEKALATDAPAAFIE----------LLVEIDAWSQV------MPELTISPSSVSDLQQIS 228 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 ++ RFATL G + L Q+LR+PN+ + LA+ Sbjct: 229 QVTQCTHTRFATLMLRQGDTFE------------------INLLSQKLRLPNQYKRLAQA 270 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 V + L+P +++L + D WR+P+R+EQL A +R +D Sbjct: 271 VFGSRKWLLQPSPLSPAQLLELANGADMWRQPERIEQL-----AHIRHIARPNISD---- 321 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 + A A+S+ ++V G KG E+ + L R+ A+ Sbjct: 322 GCIVSALTQARSIDASSIVARGLKGPEVGQVLNEERLLAI 361 >UniRef50_Q1QC26 Polynucleotide adenylyltransferase region n=2 Tax=Psychrobacter RepID=Q1QC26_PSYCK Length = 390 Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 159/353 (45%), Positives = 217/353 (61%), Gaps = 25/353 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M++YLVGGAVRD LLG P+KD+D+VVVG+T EML+AG+QQVG DFPVFLHP EEYAL Sbjct: 1 MQVYLVGGAVRDQLLGRPIKDKDFVVVGATVTEMLEAGFQQVGADFPVFLHPVNREEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA------QDD---NGEIIDPYN 111 ARTERK G GY GF+ +A+ DV+L+DDL+RRDLTINA+A DD +G++ID Y Sbjct: 61 ARTERKQGLGYQGFSVHASIDVSLKDDLQRRDLTINAMAIEVTSLTDDTPISGDVIDYYG 120 Query: 112 GLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 GL D++N+ LRHVS AF EDPLRVLR ARF +RY LGF IAD+TL LMRE+ +GEL H Sbjct: 121 GLQDIENKTLRHVSSAFNEDPLRVLRTARFYSRYYDLGFTIADDTLVLMRELVASGELTH 180 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH-PEIDTGI 230 L+ ER+W+E+ A+ +PQV++Q L D GAL F P W+ ++ + Sbjct: 181 LSSERIWQESSRAMMQLSPQVYWQQLFDIGALAEYFA--------PLHQAWNDDQLRETV 232 Query: 231 HTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRV 290 T +L A + + R+A + L P L+ H VK + + +V Sbjct: 233 QT--SLYFAGQMHLNLSQRWALVMVSL-----KPSLFQNKHTEAITAVKSINDIGNMAKV 285 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 P A L + D + L+ + L + A ++P+++ QL +TS+ Sbjct: 286 PKAQTQFASLFVQQADKLSVITQLSAAEKIDLIQACSAHKEPEKLSQLLVTSQ 338 >UniRef50_B5JXP2 tRNA nucleotidyltransferase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXP2_9GAMM Length = 392 Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 171/410 (41%), Positives = 229/410 (55%), Gaps = 44/410 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IYLVGGAVRD LLGL VKDRDWVVVG+T ++ML GYQQVGR FPVFL PQ+ EE+AL Sbjct: 1 MQIYLVGGAVRDQLLGLDVKDRDWVVVGATAEDMLAQGYQQVGRQFPVFLDPQSKEEHAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE K G GY+GF +AAPDVTLE DL RRDLTINA+AQD G++ID + G DL + Sbjct: 61 ARTETKIGPGYSGFEVHAAPDVTLEQDLLRRDLTINAMAQDRQGQLIDEHAGQADLSAGV 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAH----LGFRIADETLALMREMTHAGELEHLTPER 176 LRH+SPAF EDPLR+LRVARFAAR+ F +A ET L+ +M A E+E L+ ER Sbjct: 121 LRHISPAFREDPLRILRVARFAARFCQPLLARDFEVARETAQLLCKMVEANEVEALSKER 180 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM-- 234 W+E E A+ P+ F +V+ CGAL+ L W P + + + + Sbjct: 181 AWQEFERAMGETQPRRFLEVMYQCGALQRL---------------WAPAVQSDDWSELWP 225 Query: 235 ----TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRV 290 + LS +VRFA + G+ P P L EQ+ Sbjct: 226 RLREVADIVPALSASPEVRFAAII-----GVLP----------APQAKLLSEQMG----A 266 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 P + LA LVA + + P ++ L + +DA+RKP+R++ L EA +R Sbjct: 267 PKRFKQLAELVATHANTVKHSTRQPPPAVLNLLNKMDAFRKPERLDDALLACEAAIRSLP 326 Query: 351 GFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 PQ +L + A +V +++ +G + EE+ R AA+ Sbjct: 327 KERQRPQPQREYLLSCYYAASAVTAADMMKLRLEGKALAEEIDTHRKAAI 376 >UniRef50_C8N8W3 Multifunctional CCA protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8W3_9GAMM Length = 358 Score = 279 bits (714), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 139/213 (65%), Positives = 164/213 (76%), Gaps = 1/213 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+I+LVGGAVRDALLGLPV DRDWVVVG+T +EML G++QVG+DFPVFLHPQ+ EEYAL Sbjct: 1 MEIFLVGGAVRDALLGLPVHDRDWVVVGATAEEMLAQGFRQVGKDFPVFLHPQSGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR ERK+G G+ F AP+V+LE DL RRDLTINA+AQ +G ++DPY G D+Q R+ Sbjct: 61 ARQERKTGRGHQAFAFDFAPEVSLEADLLRRDLTINAMAQAADGRLVDPYGGQADVQARV 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLRVLR+ RF AR+A LGF IA ETLAL R M AGEL+HL+ ER+W E Sbjct: 121 LRHVSPAFAEDPLRVLRLMRFYARFAPLGFSIAAETLALCRAMVAAGELQHLSAERIWAE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVL-FPEIDA 212 E AL + PQ FF L+ GAL VL F DA Sbjct: 181 CEKALASPAPQAFFSGLQAVGALNVLGFDASDA 213 >UniRef50_UPI0000E87B3C tRNA nucleotidyl transferase, putative n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87B3C Length = 378 Score = 275 bits (703), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 154/406 (37%), Positives = 233/406 (57%), Gaps = 30/406 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIYLVGGAVRD+LL +P KD+D++VVG+TP+ M++ G++ +G+DFPVFLHP+++EEYAL Sbjct: 1 MKIYLVGGAVRDSLLNIPFKDKDYLVVGATPEIMVNLGFKPIGKDFPVFLHPKSNEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE+K +G+ GF YA+PDV++E+DLKRRD+TINA+AQD G IDPY+G+ D+ ++ Sbjct: 61 ARTEKKIAAGHKGFNFYASPDVSIEEDLKRRDITINAIAQDSEGNYIDPYDGISDIGKKI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 +RHVSP+F EDPLRVLRVARF A+ F I DET+ LM+ M GE+E L+ ERV E Sbjct: 121 IRHVSPSFQEDPLRVLRVARFKAKLP--SFVIYDETMMLMKRMVADGEVECLSSERVTAE 178 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 L ++ +VL +C AL ++FP+I K H + + L L+ A Sbjct: 179 LMKGLDQKDAFSMLEVLDECAALPIIFPDI--------SFKKH---NRAVKKLFDLANEA 227 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +S + L + L P +E + +++ EI + L Sbjct: 228 QVSNSKRLLLFLLAVNFEDNLINPT---------------IEVNTRIIKLTAEINKIIVL 272 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + ++ D + F LN ++ + L D +R+P RV + ++GR + +G Sbjct: 273 LQKYSDKLINFFTLNVESQLDLLGVFDFFRRPHRVIECIDLISLVLQGR-DLSNVLLLEG 331 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 R L ++ A + K V+ G I+ L R R+ ++ K + Sbjct: 332 RSLILEYQ-ADLLHNKITVDKDQSGENIKRALYRERLNTLSKLKNR 376 >UniRef50_A1AVM9 Polynucleotide adenylyltransferase region n=3 Tax=Gammaproteobacteria RepID=A1AVM9_RUTMC Length = 362 Score = 274 bits (700), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 145/343 (42%), Positives = 202/343 (58%), Gaps = 35/343 (10%) Query: 1 MKIYLVGGAVRDALLGLP--VKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEY 58 MK+YLVGGAVRD LLG+ ++DW+VVGS+ ++MLD GY+QVG++FPVFLHP T EEY Sbjct: 1 MKVYLVGGAVRDQLLGIADEFTEKDWMVVGSSSKQMLDLGYRQVGKNFPVFLHPGTQEEY 60 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 ALAR ERK G+GY GF + VTLE DL RRDLTINA+AQ GE+ DP+NG DL N Sbjct: 61 ALARLERKIGTGYKGFKFDISSQVTLEQDLFRRDLTINAMAQK-AGELFDPFNGQEDLNN 119 Query: 119 RLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 +LRHVS AF EDP+R+LR+ARFAAR+ GF++A +T LM +M +GE++ LTPERV+ Sbjct: 120 GILRHVSNAFSEDPVRILRIARFAARFKKFGFKVAHQTHQLMSQMVTSGEVDALTPERVF 179 Query: 179 KETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSM 238 KE AL+ P FF+VL CGA + +F +D + H H+ + + Sbjct: 180 KELNKALSYETPSAFFKVLTACGAYQKVFSSLD--------NQVHQN-----HSNSFVFL 226 Query: 239 AAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLA 298 + + + ++F+ D RH+ ++ LC ++ P + + L+ Sbjct: 227 DNLNTDKAHIKFSIWLKD----------ENRHN---------IKALCNIIKCPKQYQQLS 267 Query: 299 RLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALT 341 LV++F+ F + + F D R R E L T Sbjct: 268 ELVSQFYQFSQDFTNHSSNEVFDFFAKTDILRHKDRFEDLLST 310 >UniRef50_UPI0000E0E587 tRNA nucleotidyltransferase n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E587 Length = 378 Score = 271 bits (693), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 162/415 (39%), Positives = 233/415 (56%), Gaps = 54/415 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ YLVGGAVRD LL +KDRD+VVVG++P++++ GY+ VG+DFPVFLHP+T EEYAL Sbjct: 1 MQTYLVGGAVRDTLLKRRIKDRDYVVVGASPEQLVALGYKPVGKDFPVFLHPETQEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR ERK G GY GF+ VTLE+DL RRDLTINA+A DD G IIDP+NG DL +R+ Sbjct: 61 ARVERKVGLGYGGFSFVTDATVTLEEDLSRRDLTINAMAMDDQGNIIDPFNGQADLAHRI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 +HVSPAF EDPLRVLR+ARF ARY GF IA ET+ LM+++ H+GEL L+ RVW+E Sbjct: 121 FKHVSPAFVEDPLRVLRIARFMARYHQYGFTIAPETVELMKKIGHSGELAALSAPRVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 T AL P+++F VL ID L P W ++ I + +L++A Sbjct: 181 TALALGEFAPEIYFSVL------------IDTLCLSP----WFDQLSASIRNIESLALA- 223 Query: 241 MLSPQVDVRFATLCHDLGKGLTPP-ELWPRHH----------GHGPAGVKLVEQLCQRLR 289 KGL E+ H G+ P V QL L Sbjct: 224 --------------FQHAKGLLESGEVTQDEHLAITTTLLTLGNKPQDVSAWTQL---LP 266 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 +P ++D L + + L + +++ + D R+PQR LAL ++ Sbjct: 267 LPTFVQDCILLTHRHMNTMEQLDTLEAQQLLECLNQCDIHRRPQR---LALM----IKVL 319 Query: 350 TGFES-ADYPQGR-WLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 + +E +D+ +L + A+SV + ++ G++G +I+ +L ++A +++ Sbjct: 320 SCYEQVSDFTLNYLFLENVVQAAKSVNVQDIIAQGYQGADIKTQLQHAQLAQIST 374 >UniRef50_A0Q8A2 CCA-adding enzyme n=18 Tax=Francisella RepID=CCA_FRATN Length = 369 Score = 269 bits (688), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 153/361 (42%), Positives = 216/361 (59%), Gaps = 39/361 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD LLG+ KD+DWVVVG+T EML G+ ++ +FPVF+HPQT +EYAL Sbjct: 1 MKFYLVGGAVRDMLLGITPKDKDWVVVGATEDEMLANGFIKIAANFPVFIHPQTKQEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR+E+K+ +GY GF + +TLEDDLKRRDLTIN++A D N ++IDP+NG DLQNR+ Sbjct: 61 ARSEKKTANGYHGFEVNFSKYITLEDDLKRRDLTINSIAIDQNNKVIDPFNGQADLQNRI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH S AF EDPLRV+R+ARF A+ ++ F IA+ETL L++E+ GEL HLT ER+ E Sbjct: 121 LRHTSIAFIEDPLRVVRLARFKAQLSNFNFSIAEETLTLIKELIKTGELNHLTRERLHIE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDA-LFGVPAPAKWHPEI--DTGIHTLMTLS 237 AL NP++FF L + AL+++FP I L +P + + I D+ I+ +TL Sbjct: 181 FVKALN--NPKIFFTTLEELEALKIIFPNISCILLLIPNKSFFENPIYKDSNINEKITLC 238 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKL----------VEQLCQR 287 + + ++D D+ K L L +H+ A + + E++ Q Sbjct: 239 LLKVPQQKLD--------DIRKELL---LTNKHYKLLKASIAISKILEDRNITAEEIFQL 287 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 ++ N IRD L AE +L K +K+ D+I P R QL T+ ++ Sbjct: 288 IKNANIIRD-KNLFAESLNLY--------KKYLKVCDTI----TPHRNYQLLQTTINTIK 334 Query: 348 G 348 Sbjct: 335 N 335 >UniRef50_C8PZE9 Multifunctional CCA protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZE9_9GAMM Length = 393 Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 151/353 (42%), Positives = 199/353 (56%), Gaps = 37/353 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M++YLVGGAVRD +L V + D+VVVG+TP++ML+ G+ QVG DFPVFLHP+TH+EYAL Sbjct: 1 MQVYLVGGAVRDYVLAREVTEHDYVVVGATPEQMLELGFSQVGADFPVFLHPRTHDEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG--------------EI 106 ARTERKSG+GY GF +A VTLE+DL RRDLTINA+A + NG +I Sbjct: 61 ARTERKSGNGYLGFNVHADAAVTLEEDLARRDLTINAMAIEVNGLFDCGFKQGKFDARDI 120 Query: 107 IDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 IDPY GL D+Q + LRHVS AF EDP+RVLR+ARFA+RYA LGF + + T L +M A Sbjct: 121 IDPYGGLADIQQKKLRHVSIAFAEDPVRVLRLARFASRYAPLGFTVDESTTKLTSQMKAA 180 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 GEL HL ERVW ET ALT P ++F L L V+ P++ P +W Sbjct: 181 GELSHLVAERVWSETSKALTQAWPDIYFDTLYQLNVLDVIMPKLYQASN-DNPKQWQL-- 237 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATL--CHDLGKGLTPPELWPRHHGHGPAGVKLVEQL 284 L L MA ++FA + C + L P + +E Sbjct: 238 -----MLSALRMAGEQQADNLIKFALVATCFKSDQQLNNPT------------TEYLE-F 279 Query: 285 CQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQ 337 CQ L+VP L + E D + F L + + +L ++ + +EQ Sbjct: 280 CQGLKVPKNTERLGLFILEHFDKLKNFDHLTAEQLFELLRLTNSLKDTSLLEQ 332 >UniRef50_A5EXT8 TRNA nucleotidyltransferase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXT8_DICNV Length = 357 Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 166/399 (41%), Positives = 215/399 (53%), Gaps = 49/399 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ YLVGGAVRD LLGL DRDWVV+G T M G++QVGRDFPVFLHP+T EEYAL Sbjct: 1 MQRYLVGGAVRDRLLGLDGSDRDWVVIGETMDSMRARGFRQVGRDFPVFLHPETGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR ERK G+ GF ++TLE+DL RRDLTINA+A+D+NG++IDPY G D+Q ++ Sbjct: 61 ARIERKIARGHQGFCFDFHQNITLEEDLIRRDLTINAMAEDENGQLIDPYGGSADIQAKI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLRVLR+ RF AR+AHLGF IA ETL L EM +GEL+ LT ERVW+E Sbjct: 121 LRHVSPAFSEDPLRVLRLMRFWARFAHLGFTIAPETLQLCGEMARSGELQTLTAERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E AL NP+ F L AL V LFG P+ L ++ Sbjct: 181 CEKALKAPNPECFLMGLAQIHALNV-------LFGATQPSA---------RQLAAMNQRL 224 Query: 241 MLSPQVDV--RFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLA 298 M +P ++ R A LW L+ L +++ +P + Sbjct: 225 MNTPTLEAHQRLARC------------LWHEK--------DLIAALKKQMPLPQKYHYWL 264 Query: 299 RLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYP 358 LVA + +L+ + ++ + + + R V LA T D +T +A Sbjct: 265 DLVARYGELLQNWQHISGEQRWAILKACGGLRAAGDVFALAQTCGVDEALQTQITAAQ-- 322 Query: 359 QGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRI 397 E SV V +AGF G + EL RR+I Sbjct: 323 ---------EKVNSVQANDVQKAGFSGAALGAELKRRQI 352 >UniRef50_A5WEX7 tRNA cytidylyltransferase n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WEX7_PSYWF Length = 413 Score = 264 bits (674), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 166/432 (38%), Positives = 232/432 (53%), Gaps = 53/432 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M++Y+VGGAVRD LL P D+D+VVVG+TP++M++AG+ QVG DFPVFLHP+T EEYAL Sbjct: 1 MQVYIVGGAVRDELLNRPYTDKDFVVVGATPEQMIEAGFIQVGADFPVFLHPKTKEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD---------NGEIIDPYN 111 ARTERKSG GY GF YA+P+VT+E+DL RRDLTINA+A + GE+IDPY+ Sbjct: 61 ARTERKSGKGYKGFEVYASPEVTIEEDLLRRDLTINAMAIEVKSLWDSTPLTGEVIDPYD 120 Query: 112 GLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARY----AHLGFRIADETLALMREMTHAG 167 G D++N++LRHVS AF EDPLRVLR+ARF R+ A F IA +TLAL+ + + Sbjct: 121 GQSDIKNKMLRHVSEAFSEDPLRVLRIARFYGRFYDPKAEHNFSIAPDTLALIATINDSD 180 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 EL LT ERVW+ET AL P + L+ GAL +FP I G D Sbjct: 181 ELACLTAERVWQETSRALMQDCPYAYLDCLQYMGALPHIFPSIANALG-----------D 229 Query: 228 TGIHTLM--TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHH-GHGP--------- 275 I L+ L +A L+ + R+A + L + + L PRHH H P Sbjct: 230 DKIKALVFQALQLAGQLNLSLQQRWAIIMLSLAQEVIDV-LNPRHHSNHHPHQIDEALFS 288 Query: 276 AGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPML------NPKTIVKLFDSIDAW 329 A ++Q+ L+VP + A A + +P L + ++ KL A Sbjct: 289 AWASKLKQVSHNLKVPKKTTQFAASYANCSGYLAAYPYLGQHSDSDANSLAKLIVLTKAD 348 Query: 330 RKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIR 389 + P + +L + E D+ + A + + + ++ +G I Sbjct: 349 KDPSELHELIQLHKVIEMAWQQLEMTDFIK----------AYTQISMSDIDPDLQGSAIG 398 Query: 390 EELTRRRIAAVA 401 L+ RI A+A Sbjct: 399 TALSAARINAIA 410 >UniRef50_A6GQU7 Polynucleotide adenylyltransferase region:Metal-dependent phosphohydrolase, HD subdomain n=1 Tax=Limnobacter sp. MED105 RepID=A6GQU7_9BURK Length = 393 Score = 261 bits (666), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 151/351 (43%), Positives = 201/351 (57%), Gaps = 37/351 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +K+Y+VGGAVRDAL+G DRDWVVVG+T ML AG+ VG DFPVFLHP+THEEYAL Sbjct: 26 VKVYVVGGAVRDALMGRASSDRDWVVVGATVDHMLAAGFTPVGSDFPVFLHPRTHEEYAL 85 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GY GFT +A P VTLE+DL RRD T+NA+A + G +IDP+ GL DL+N+ Sbjct: 86 ARTERKSGHGYKGFTFHAEPSVTLEEDLARRDFTVNAMAMNAEGGLIDPFQGLADLENKC 145 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 +RHVSPAF EDPLRVLR+ARF AR+ L F +A+ET+ L RE+ +GEL+HL PERV+ E Sbjct: 146 MRHVSPAFSEDPLRVLRLARFLARF--LDFSVAEETMDLCRELQASGELKHLVPERVYAE 203 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 + P +++ L P VP + PE D L +LS A Sbjct: 204 LTKGMGEEKPSRMIKLISKLNGWGELAPACS----VPFSSFDKPEYD----CLNSLSGAE 255 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 A + LG L+ + ++ L + R+P I DL+ L Sbjct: 256 ----------ARWVYSLGFFLS---------------LAHIKALAKAWRLPRTIEDLSVL 290 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQL-ALTSEADVRGRT 350 + +P + + F +D +RKP R+ Q+ L ++ GR Sbjct: 291 ACHCLAFVQQ-QSTDPDSFARFFGQVDLYRKPARLRQVNQLVAQIHGEGRV 340 >UniRef50_Q7U391 CCA-adding enzyme n=5 Tax=Bordetella RepID=CCA_BORBR Length = 364 Score = 257 bits (656), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 153/338 (45%), Positives = 194/338 (57%), Gaps = 41/338 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +++Y+VGGAVRD LLGLP DRDWVVVG+TP++M G+ VG DFPVFLHP+T EEYAL Sbjct: 12 LQVYIVGGAVRDGLLGLPAGDRDWVVVGATPEDMARRGFIPVGGDFPVFLHPRTKEEYAL 71 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GY GFT Y DVTLE DL+RRDLT+NA+A+ GE++DP +G+ D++ R+ Sbjct: 72 ARTERKSGRGYKGFTFYTGADVTLEQDLQRRDLTVNAIARTPQGELVDPLDGVADVRARV 131 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHV AF EDP+R+LR+ RFAAR+ F IA ET+ L R M AGE + L PERVWKE Sbjct: 132 LRHVGEAFAEDPVRILRLGRFAARFGD--FSIAPETMQLCRRMVEAGEADALVPERVWKE 189 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 L + P VL GAL + PE+ V A EID + L+ Sbjct: 190 VSRGLMAQAPSRMLDVLARAGALARVMPELHDDAAVRA------EIDRAAAAGLPLAG-- 241 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 R+A LC H P + L +RLR P E D ARL Sbjct: 242 --------RYALLCR-----------------HTPE----RDALGRRLRAPVECMDQARL 272 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQL 338 + D + + + L + DA RKP+R + L Sbjct: 273 LPLAVDALAASATPAAQ--LDLIERCDALRKPERFDAL 308 >UniRef50_D1RE93 Multifunctional CCA protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RE93_LEGLO Length = 382 Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 163/409 (39%), Positives = 220/409 (53%), Gaps = 56/409 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV-----GRDFPVFLHPQTH 55 MKIYLVGGAVRD LLG KD DW+VVG T EML GY+ V +FPVFLHP+T Sbjct: 1 MKIYLVGGAVRDKLLGFAPKDNDWLVVGGTRDEMLKLGYKPVPNNHGTSEFPVFLHPETK 60 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA----QDDNGEIIDPYN 111 EEYALAR E ++G G+ GF + +T+ DDLKRRDLTINA+A + GE+IDPYN Sbjct: 61 EEYALARLEERTGYGHGGFEFDTSSSITIVDDLKRRDLTINAMAFPVEDEKMGELIDPYN 120 Query: 112 GLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 G DL+NR+LRH+SPAF +DPLR++R ARFA A LGF +A ET+ LM +M G++ Sbjct: 121 GKVDLENRILRHISPAFIDDPLRLIRTARFA---ACLGFEVAAETMELMTQMVIEGKVSE 177 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 L ER+W E E A+ +P+ FF VL+ C A R+LFP I P P GI+ Sbjct: 178 LRNERIWMEMERAIKGPHPEKFFDVLKKCSADRILFPYIK----TPGP---------GIN 224 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 + AA VRFA L DL + + V + C++ + Sbjct: 225 ---AMQRAADHKNSAPVRFAALMLDLTQ-------------------EEVTKFCKQFNLS 262 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 N+ RDLA L + L+ I+ L ++ A++ +R + V GR Sbjct: 263 NQYRDLALLAIKNLPQFQRLSELDAPEILILLTNMGAFQNKERFNEC-----LHVFGRYT 317 Query: 352 FESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 E + +R A+ A S+ TK + + + G EI + RI A+ Sbjct: 318 QEPGYVEK---IRNAFHAATSINTKELA-SKYIGHEITRRIKILRIEAI 362 >UniRef50_A4T0E4 Polynucleotide adenylyltransferase region n=2 Tax=Polynucleobacter necessarius RepID=A4T0E4_POLSQ Length = 376 Score = 249 bits (637), Expect = 9e-65, Method: Compositional matrix adjust. Identities = 144/351 (41%), Positives = 194/351 (55%), Gaps = 50/351 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIY VGGA+RD L+ LPV D D+VVVGS+ +EM+ G++ VG+DFPVFLHP T EYAL Sbjct: 1 MKIYAVGGAIRDTLMSLPVHDIDYVVVGSSVEEMVAKGFRPVGKDFPVFLHPDTQAEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN------GEIIDPYNGLG 114 ARTERK+G GY GF YA P VTLE DL+RRDLTINA+AQ+ G I+DPYNG Sbjct: 61 ARTERKTGKGYKGFHFYADPSVTLEQDLERRDLTINAMAQEVGLDGTWIGPILDPYNGQE 120 Query: 115 DLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 DL ++ RHVS AF EDPLR+LR+ARFAAR+ F +ADET+ ++ + +GEL L+ Sbjct: 121 DLAAKVFRHVSDAFAEDPLRLLRIARFAARFPE--FSVADETMIALKAIVQSGELAALSA 178 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT-----G 229 ER+W+E +T P FQVL + GA + P L A + E+ + G Sbjct: 179 ERIWQELARGMTAAKPMHMFQVLLNTGAAKTFLPA--TLTNQLAQEVFREELISHYELVG 236 Query: 230 IHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLR 289 + ++ M P ++R C +R Sbjct: 237 NYLEERCAVTLMRLPSSEIRSWADC---------------------------------VR 263 Query: 290 VPNEIRDLARLVAEFHDLI--HTFPMLNPKTIVKLFDSIDAWRKPQRVEQL 338 +P E+RD + + +E + LI T ++ F+ D WRKP R + L Sbjct: 264 MPTEVRDFSEIFSELNTLILKTTEGKFQAVDVLAWFNRADVWRKPDRGQAL 314 >UniRef50_B6BWF7 CCA-adding enzyme n=1 Tax=beta proteobacterium KB13 RepID=B6BWF7_9PROT Length = 365 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 111/207 (53%), Positives = 154/207 (74%), Gaps = 2/207 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIYLVGGAVRD +L P ++D+VVVGSTP+EM++ ++ VG+ FPVFLHP THEEYAL Sbjct: 1 MKIYLVGGAVRDEILNQPYTEKDYVVVGSTPEEMIEKKFKPVGKSFPVFLHPDTHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE+K+G GY F Y +P ++LE+DL RRDLTINA+A+DD + IDP+NG+ D+ ++ Sbjct: 61 ARTEKKNGVGYKDFIFYTSPTISLEEDLVRRDLTINAIAKDDQNKYIDPFNGINDISKKI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLR+LR+ARF A+ F+IA+ETL L++ M + GEL++L+ +R+ E Sbjct: 121 LRHVSDAFKEDPLRILRLARFKAKLP--DFKIAEETLVLLKTMINEGELKYLSYDRIIIE 178 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLF 207 + + +FF+ L D GA+ +F Sbjct: 179 IKKVFQLKEGHIFFKTLEDIGAIDQIF 205 >UniRef50_A0L904 Polynucleotide adenylyltransferase region n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L904_MAGSM Length = 393 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 153/395 (38%), Positives = 211/395 (53%), Gaps = 31/395 (7%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 +Y VGG+VRD LLG +D+DWVVVG+ P+++ GY++VG DFPVFLHP T EEYALAR Sbjct: 19 LYEVGGSVRDRLLGQRPRDQDWVVVGACPEQLQQLGYKKVGADFPVFLHPYTQEEYALAR 78 Query: 63 TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLR 122 ERK G GY GF A P VTLE DL RRDLTINA+A+ +G++IDPY G+ DLQNR LR Sbjct: 79 RERKQGCGYLGFAVEAPPTVTLEQDLARRDLTINAMARTLDGQLIDPYGGVQDLQNRTLR 138 Query: 123 HVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETE 182 HV+ AF EDPLRVLRVAR AR A +GF + T L R++ GEL H+ PERVW+E++ Sbjct: 139 HVTAAFAEDPLRVLRVARLLARLAPMGFAVDPATERLCRQLVAQGELGHVCPERVWRESQ 198 Query: 183 SALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAML 242 L F Q ++ G V F +P+ + HP LSMA Sbjct: 199 KGLLEPRGDRFAQFVQQIG---VEF--------IPS-QRLHP----AACAFSRLSMACAQ 242 Query: 243 SPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVA 302 V VR DL G G + L +RL +P ++ A + Sbjct: 243 PGDVTVRLVAWLWDLLA----------QAGEEAQGDVWLHALAKRLALPKGLQREAAWLL 292 Query: 303 EFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRW 362 + + + + L + + + R Q + + +T F AD G Sbjct: 293 SHLSVGMASVTADVEGLYALLEGLHGGLRQPRTAQFLQLCQIE---QTLFHGADRLLG-- 347 Query: 363 LREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRI 397 +++A ++ QSV +A++ G+KG E+ + L R+ Sbjct: 348 IKKAMKIWQSVKPQAIMADGYKGAELGQRLKFERL 382 >UniRef50_C5ZY12 tRNA nucleotidyl transferase n=3 Tax=Helicobacter RepID=C5ZY12_9HELI Length = 417 Score = 218 bits (554), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 144/407 (35%), Positives = 222/407 (54%), Gaps = 21/407 (5%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 KIYLVGGA+RD LLGLP KD+D+V VG + + YQ+VG++FPVFL +H + ALA Sbjct: 9 KIYLVGGAIRDYLLGLPTKDKDYVAVGFSENDF--QRYQKVGKNFPVFL-IDSHTQIALA 65 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGE-IIDPYNGLGDLQNRL 120 R E K+ GY GF+ Y +VTL +DLKRRDL+INA+A D N +IDP+NG DLQN++ Sbjct: 66 RKETKTTKGYNGFS-YKTDNVTLLEDLKRRDLSINAMALDLNSNTLIDPFNGKKDLQNKI 124 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH SPAF EDPLR+LR+ARF A+ + ++I T L+ M EL+ L P RV++E Sbjct: 125 LRHTSPAFCEDPLRILRLARFKAKLG-IHWKIHPSTKVLVHSMKE--ELKTLEPNRVFEE 181 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 + L+ +N +FF+ L + G L+ +FP I AL + H E +HT+ L Sbjct: 182 IKQVLSQKNSHLFFETLFELGVLKEIFPSIYALTILKEYNPNHLESSVFVHTMEVL--KR 239 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI-RDLAR 299 + + + ++ L H++ K T + P K VE L +++P I + + Sbjct: 240 LDNDSLLLKLTALYHNIAKPYTYRNSKNPNEYDNP---KKVESLID-MQIPKTIQKKMLI 295 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 L+ + H F M +P I+ F S K ++Q+ EAD + + Sbjct: 296 LIGNHIKITHLFAM-HPSKILDFFHSFKG-DKTLLLDQIRFF-EADYKRCISQAQYTTLE 352 Query: 360 GRWLREAWEVAQSVPTKAVVEAGF---KGVEIREELTRRRIAAVASW 403 + + E + S K +++ G +I++ + + +I ++S+ Sbjct: 353 SKKIIELFSQINSYSPKEWIQSQKSKPNGNQIKDHIQKAKINLISSF 399 >UniRef50_C6NV27 tRNA nucleotidyltransferase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NV27_9GAMM Length = 407 Score = 216 bits (551), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 126/215 (58%), Positives = 153/215 (71%), Gaps = 10/215 (4%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA----GYQQVGRDFPVFLHPQTHE 56 MK YLVGGAVRD L G+ V+DRD+V+VG+ QE +DA G++ G+DFPV + + E Sbjct: 1 MKRYLVGGAVRDRLRGVTVQDRDYVLVGAG-QEDIDALLARGFRWAGKDFPVLIG-REGE 58 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 EYALARTERK+GSG+ GF A V+LEDDL RRDLTINA+A+D + G I+DPY G D Sbjct: 59 EYALARTERKTGSGHRGFVV-ATAGVSLEDDLLRRDLTINAMAEDLETGAIVDPYGGRRD 117 Query: 116 LQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 L R+LRHVSPAF EDPLRVLR+ARFAAR F IA ET AL+R+M AGEL L+P+ Sbjct: 118 LDARVLRHVSPAFREDPLRVLRLARFAARLPD--FVIAPETEALVRQMIAAGELAELSPD 175 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEI 210 RVWKETE AL +F +L L VLFPE+ Sbjct: 176 RVWKETEKALKGPAASRYFSLLWYWSGLAVLFPEL 210 >UniRef50_D1Y2S7 Multifunctional CCA protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2S7_9BACT Length = 414 Score = 213 bits (542), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 136/309 (44%), Positives = 182/309 (58%), Gaps = 11/309 (3%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ--QVGRDFPVFLHPQTH--EE 57 ++Y+VGG VRD L+G P +DRD+VV G L+ +Q VGR FPV+L E Sbjct: 16 QLYVVGGWVRDRLIGRPAEDRDYVVCG-LDAATLEREFQVRAVGRQFPVYLLEVGGRLSE 74 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA-QDDNGEIIDPYNGLGDL 116 ALARTERK+G+GY GF +PD T+E+DL RRD +N++A + GE+IDP+ G D+ Sbjct: 75 VALARTERKTGTGYRGFEARFSPDTTIEEDLYRRDTRMNSMAVRLPGGELIDPFGGRADI 134 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 + R++ S F +DP+R LR A + A LGF IA T+ LM LE ER Sbjct: 135 ERRVISATSEHFRDDPVRALRAA---RQAAQLGFSIAPGTVRLMSACREELALE--PTER 189 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 V+ E AL + P++FF LRD G L +FPE+ AL GV PAK+H +D H+L L Sbjct: 190 VFAEMRKALASPRPELFFIALRDAGILDAVFPELTALDGVEQPAKYHRGLDAFEHSLEVL 249 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 A L+P+ RFA L HDLGKGLTP + WP H GH G+ +E+L +R+ +P Sbjct: 250 RRTAALTPRAATRFAALVHDLGKGLTPRQEWPHHIGHEERGLAALERLDRRMTLPRPWYH 309 Query: 297 LARLVAEFH 305 AR V H Sbjct: 310 FARFVIANH 318 >UniRef50_Q3EZB5 TRNA nucleotidyltransferase n=2 Tax=Bacillus thuringiensis RepID=Q3EZB5_BACTI Length = 510 Score = 207 bits (527), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 130/323 (40%), Positives = 177/323 (54%), Gaps = 23/323 (7%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQ--EMLDAGYQQVGRDFPVFLHPQTHE--E 57 K+YLVGGAVRD LL + KD+D+ V G + + E L G+DFPV+ E E Sbjct: 19 KVYLVGGAVRDLLLDIVPKDKDYCVTGISQEGFESLFPTAMLQGKDFPVYRMDIDGELCE 78 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 ALAR ERK G+ GF YA+PD+T+EDDL RRD+TIN++A D + ++IDP+ G DL Sbjct: 79 VALARKERKVSEGHNGFVIYASPDITIEDDLARRDITINSMAIDLETNKLIDPFYGELDL 138 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 + +R + AF EDPLRV R ARFAA Y GF I +T +M ++ EL L ER Sbjct: 139 RTETIRATTEAFCEDPLRVYRAARFAAEY---GFFIEYKTSTMMNQL--KSELLSLPIER 193 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 V +ET+ A R P FF L+ L V FPEID L + +HPE + HT+ + Sbjct: 194 VLEETKKAFMARTPSRFFHALKSANVLDVHFPEIDCLSELEQNLMYHPEGNVFEHTMQVI 253 Query: 237 SMAAMLSPQVDVR------FATLCHDLG----KGLTPPELWPRHHGHGPAGVKLVEQLCQ 286 A L+ ++ V F+ L HD+G KG+ P + P + H GV + EQ Sbjct: 254 DSARYLADELPVNSELVVMFSALLHDVGKYVTKGIHPVKGTPTYIAHEAEGVPIAEQFLD 313 Query: 287 RLRVPNEIRDLARLVAE---FHD 306 R + + + + VA FHD Sbjct: 314 RFNLKSYKKAILFNVANHMVFHD 336 >UniRef50_UPI00016992C1 multifunctional tRNA nucleotidyl transferase/2''''3''''-cyclic phosphodiesterase/2''''nucleotidase/phosphatase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016992C1 Length = 371 Score = 202 bits (513), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 135/360 (37%), Positives = 183/360 (50%), Gaps = 30/360 (8%) Query: 12 DALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLH--PQTHEEYA-LARTERKSG 68 D LL LPV +RDWVVVG ML AG V P+T + ARTE K+G Sbjct: 2 DQLLELPVHERDWVVVGGDEARML-AGRFSVAPTVSSRCSSIPRTVVRSSRCARTETKTG 60 Query: 69 SGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRHVSPAF 128 +GY GF + PDVTLE DL+RRDLTINA+A D G +IDP +G DL+N LRH+S AF Sbjct: 61 AGYKGFAVHVGPDVTLEADLRRRDLTINAMALDQQGRLIDPLHGRDDLENGRLRHISDAF 120 Query: 129 GEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTR 188 EDP+R+LR+ARFA + GFR+A T L+++M + +L L PER+W+E E +L Sbjct: 121 IEDPVRLLRLARFADKLGCWGFRVAHSTHRLLQQMAASDDLLSLKPERIWREMEKSLAEL 180 Query: 189 NPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDV 248 P FF+VL+ CGAL+ L PE+D G A E D L A +S + V Sbjct: 181 QPWRFFEVLQRCGALQRLLPELDTALGSSAGHAKQSETD----GFAALKRATGISTESHV 236 Query: 249 RFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLI 308 RFA L + L GP G V+ L ++LR DL R + + Sbjct: 237 RFAALFYPL---------------LGPGGD--VQALVRQLRAGRAYADLLRQLQQADR-- 277 Query: 309 HTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV---RGRTGFESADYPQGRWLRE 365 F P+ ++ + ++P R+ ++ + R +P GRWLR Sbjct: 278 GGFLAAAPEALLDTVSGLKPQQQPHRLAGFVAAAQGALAWGRCSASHHRLSWPAGRWLRS 337 >UniRef50_C4V4H3 Possible tRNA adenylyltransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V4H3_9FIRM Length = 421 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 133/333 (39%), Positives = 184/333 (55%), Gaps = 14/333 (4%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFLHPQTHE--- 56 +++ VGG VRD G KD D+V+ G T ++ L +++GR FPV+ H + + Sbjct: 27 RVFRVGGCVRDCFRGAEAKDVDYVLTGITKEKFCALFPCAEKIGRTFPVY-HVRINGMCC 85 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 E A AR E K+G GY GF P V++E+DL RRD T+NA+A + G ++DPY G D Sbjct: 86 EVAFARREVKTGMGYHGFDVEFDPSVSIEEDLYRRDTTMNAMAVELPAGTLLDPYGGRAD 145 Query: 116 LQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 + ++R VSP F EDP+R LR AR AA + G+R+ ETL M A EL H E Sbjct: 146 IAAGIIRAVSPHFSEDPVRALRAARQAAEF---GYRVEKETLGQMHAC--AEELGHEPSE 200 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E AL T P VFF+VL L V FPEI AL G P ++HPE D HT+ Sbjct: 201 RLMGELRRALMTPRPSVFFRVLHAAELLTVTFPEIAALVGQTQPTEFHPEGDAYAHTMAM 260 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 L + A S + VRF L HDLGKG TP E+ P H+ H G++ + QR+ +P++ + Sbjct: 261 LDVVAERSDNIIVRFCALVHDLGKGRTPQEMLPHHYRHEETGLEALASWNQRMTLPHDWK 320 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDA 328 A V H + + +P IV L I++ Sbjct: 321 KAAAFVIRQH--MRAPRLTHPGKIVDLLFGIES 351 >UniRef50_Q76YD7 Putative uncharacterized protein n=1 Tax=Aeromonas phage Aeh1 RepID=Q76YD7_9CAUD Length = 347 Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 106/207 (51%), Positives = 135/207 (65%), Gaps = 6/207 (2%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M IYLVGGAVRD ++ KDRD+VVVGST EM+ GY+QVG DFPV+L +EYAL Sbjct: 1 MNIYLVGGAVRDMVMNREPKDRDYVVVGSTHDEMIAKGYKQVGADFPVYL-DHLGQEYAL 59 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTER +G GY F P+VTLE DLKRRD T+NA+A NG +IDPYNG D++ R+ Sbjct: 60 ARTERSTGKGYNDFVTDFNPNVTLEQDLKRRDFTMNAMALGMNGVVIDPYNGQQDIKERV 119 Query: 121 LRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 + V+P AF EDP+RVLR RFAARY FR++ T+ + G ++HLT ER+W Sbjct: 120 VNVVNPQAFHEDPVRVLRACRFAARY---DFRLSTLTMECILRCIKDGRMDHLTSERIWL 176 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVL 206 E E + T+ F L GA++ L Sbjct: 177 EFEKSFGTKFDD-FLAHLTLSGAVKAL 202 >UniRef50_C9KIT0 tRNA nucleotidyltransferase n=3 Tax=Veillonellaceae RepID=C9KIT0_9FIRM Length = 423 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 136/350 (38%), Positives = 186/350 (53%), Gaps = 14/350 (4%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVG--STPQEMLDAGYQQVGRDFPVFLHP--QTHEE 57 ++++VGG VRDAL + D+D++V G + L Q+VG FPV+L E Sbjct: 16 RVFIVGGWVRDALRHVRPHDKDYMVSGIAEVDFQQLFPDAQKVGHGFPVYLVSIDGCLSE 75 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGE-IIDPYNGLGDL 116 A AR ERK G GY GF P VT+E+DL RRD T+N++A + + +IDPY+G D+ Sbjct: 76 VAFARKERKEGQGYRGFRVSYDPSVTVEEDLYRRDTTMNSMALELPAKTLIDPYHGARDV 135 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 + ++R VSP F EDP+R LR AR AA + GF IA++T M EL+H ER Sbjct: 136 EKGIIRAVSPHFMEDPVRALRAARQAAEF---GFSIAEQTSRYMHACRE--ELQHEPQER 190 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + E AL P VFF+ L G L V FPE+ L G P ++HPE D HTL+ + Sbjct: 191 IIAELRRALQAERPSVFFRALERAGILSVTFPELSLLIGKTQPPEYHPEGDAWQHTLLVV 250 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 AA + V RFA L HDLGKG TP + P H+GH G++ + +R+ +P + Sbjct: 251 DGAASKTANVAARFAALVHDLGKGTTPKAMEPHHYGHEQRGLEQLAAWDRRVTLPKDWLR 310 Query: 297 LARLVAEFHDLIHTFPMLN-PKTIVKLFDSIDAWRKPQRVEQLALTSEAD 345 R + E H P+L P I L +ID R + EAD Sbjct: 311 AGRFLIEQH---MRAPLLERPGKIAALLLAIDKQRSVLTLADFNAVIEAD 357 >UniRef50_B8QTX7 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Erwinia phage phiEa21-4 RepID=B8QTX7_9CAUD Length = 422 Score = 194 bits (492), Expect = 7e-48, Method: Compositional matrix adjust. Identities = 138/383 (36%), Positives = 191/383 (49%), Gaps = 30/383 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M +LVGG++RDA+ G D D+VVV +T +++LD G ++VG+ FPVF+ E A+ Sbjct: 1 MDFFLVGGSIRDAVFGKASSDHDFVVVNATEEQLLDLGLKKVGKAFPVFI-TDDGTEIAM 59 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ------DDNGEIIDPY-NGL 113 AR E +G GY F VTL++DL RRD TINA A + E+I + Sbjct: 60 ARRENSTGEGYNDFE-VETDGVTLDEDLLRRDFTINACASAVVNGGANTDELICAHPMSR 118 Query: 114 GDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 DL +R+LR V + F EDPLR+LR RFAAR+ I ET AL R+M A L HL Sbjct: 119 YDLAHRILRVVDADRFKEDPLRILRGLRFAARH---NLFIEPETKALFRQMIEANCLAHL 175 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ER+WKE E A + N F++ + CG LFPEI + GV P K+HPE D HT Sbjct: 176 PKERIWKEIEKAASAEN---FWKFVSLCGKFN-LFPEISGMKGVRQPKKYHPEGDVLNHT 231 Query: 233 LMTLSMAAMLS-PQ--------VDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQ 283 ++ L + PQ V LCHD+GK LT E HGH + V+ + Sbjct: 232 VLALKHYEEVELPQYGWNSGDRVTQSLCILCHDMGKRLTLSE-RGNLHGH-ESDVRDLLS 289 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 +R+ P +R + AE H +H + + + + + V L +T Sbjct: 290 FVERIGAPKSVRVATQFCAEQHHRVHGMFVRRANRLALWLEEHNQFNNQAIVNALCMTCV 349 Query: 344 ADVRGRTGFESADYPQGRWLREA 366 +D R + Y Q L EA Sbjct: 350 SDANAR--LQKVPYLQMNMLAEA 370 >UniRef50_UPI0001698637 polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698637 Length = 225 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 92/190 (48%), Positives = 119/190 (62%) Query: 189 NPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDV 248 NP FF LR+ GAL L PE+D+L+GVP P +WHPEIDTG+HT+M L+ AA LS + + Sbjct: 7 NPVPFFAALREVGALARLLPELDSLWGVPQPERWHPEIDTGVHTMMVLAQAARLSDEQSI 66 Query: 249 RFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLI 308 RFA L HDLGK TP + P HHGH GV ++ LC+RLRVP ++LA +H + Sbjct: 67 RFAALTHDLGKASTPAHILPSHHGHEERGVAILRALCRRLRVPTRYQELAECCGRYHSQL 126 Query: 309 HTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWE 368 H L T +KL + +DA+R+PQR+E L EAD RGR GFE YPQ LR + Sbjct: 127 HHLDELKATTRLKLLERLDAFRRPQRLEAFLLVCEADFRGRAGFEQRTYPQADRLRRLYR 186 Query: 369 VAQSVPTKAV 378 A SV + + Sbjct: 187 AAASVDSSQL 196 >UniRef50_Q466Z1 tRNA nucleotidyltransferase n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q466Z1_METBF Length = 404 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 117/312 (37%), Positives = 169/312 (54%), Gaps = 14/312 (4%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQVGRDFPVFLHPQTHEEYAL 60 +Y+VGGAVR L+ D D+ V G T D +Q G FPVF+ E+A+ Sbjct: 22 LYIVGGAVRRFLMCQTPHDVDFCVCGLTVDTFKDLFPDARQQGNQFPVFVVDDC--EFAM 79 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNR 119 ARTE+K +GY GF + P VT+E+DL RRDLTIN++A D G I+DP+NG DL N Sbjct: 80 ARTEKKVCAGYNGFEINSDPSVTIEEDLCRRDLTINSIAIDVITGMIVDPFNGAEDLING 139 Query: 120 LLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 ++ S AF EDP+RV+R ARF Y FR + + M ++ H E++ ++ + + Sbjct: 140 IITPTSDAFKEDPVRVIRAARFMCEYP--TFRASPTLIMYMLDLVH--EIKLISDDHKFS 195 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMA 239 E + ++ P +F +L AL + FPEI +L G+ P H + D HT+ L Sbjct: 196 ELKKVFSSPKPSRYFNILNLGHALYITFPEIYSLIGI--PQAHHSDGDAFEHTMRVLDDC 253 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 L+ FA L HDLGK TP E+ P HH H V++++++ VPNE + A+ Sbjct: 254 RELTDDPVCLFAALTHDLGKATTPTEILPAHHDHETRSVEIIDKIDW---VPNEWKYFAK 310 Query: 300 LVAEFHDLIHTF 311 + A H H F Sbjct: 311 VFAADHMRGHRF 322 >UniRef50_B5JPR9 tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPR9_9BACT Length = 473 Score = 185 bits (469), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 142/370 (38%), Positives = 186/370 (50%), Gaps = 35/370 (9%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVG----STPQEMLDAGYQQ-VGRDFPVFLHPQTHEEY- 58 +VGG++RDALLGL KD D V G S Q + G VG+ F V EEY Sbjct: 34 VVGGSIRDALLGLEPKDFDVEVYGLDLDSIAQTLAKLGKTDLVGKAFAVVKLWTHGEEYD 93 Query: 59 -ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDL 116 A+ R E KSGSG+ GFT ++ E+ LKRRD TINAL D E+ID +NGL DL Sbjct: 94 FAIPRRESKSGSGHRGFTIETDAHLSEEEALKRRDFTINALLYDHATSEVIDYFNGLEDL 153 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 + R+LRHVSPAF EDPLRVLR +FA R+ + +T AL R++ H E L ER Sbjct: 154 ERRILRHVSPAFSEDPLRVLRAMQFAGRFE---MELHPDTAALCRKIGH--EFWTLPKER 208 Query: 177 VWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 VW E E A +R+ + L G LR FPE++AL +P +WHPE D HTL Sbjct: 209 VWTEWEKWAKRSRSLSHGLRALVASGWLRY-FPELNALRSLPQDPEWHPEGDAWTHTLYC 267 Query: 236 LSM-------AAMLSPQVDV-RFATLCHDLGKGLTPPELWPRHH------GHGPAGVKLV 281 L +++ + V F LCHDLGK R GH V L Sbjct: 268 LDALVRDTDWSSLAEAERGVLAFGVLCHDLGKARCTRWALKRGEKHWISPGHDSQSVWLA 327 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPM--LNPKTIVKLFDSIDAWRKPQRVEQLA 339 EQ ++R P+E+RD + H ++T P + ++ +L + P +L Sbjct: 328 EQFFNKMRAPHELRDKVMALVGNHHFLNTVPEGGHSDASLRRLAKRL----SPATTHELV 383 Query: 340 LTSEADVRGR 349 AD RGR Sbjct: 384 YVMTADHRGR 393 >UniRef50_Q0F3A3 TRNA nucleotidyltransferase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3A3_9PROT Length = 468 Score = 183 bits (465), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 136/367 (37%), Positives = 181/367 (49%), Gaps = 32/367 (8%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ-----QVGRDFPV--FLHPQTHE 56 +LVGG VRD +L + KD D V G T + DA Q VG+ F V Q Sbjct: 37 WLVGGCVRDLMLHINPKDYDLEVYGLTEAALSDALQQLGRCEMVGKQFGVHKLWFRQMEI 96 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 + AL RTE KSGSG+ GF + P +T E RRD TINA+ D ++D + G D Sbjct: 97 DVALPRTESKSGSGHRGFVVHTDPHLTPEIATLRRDFTINAMMYDPLQHRLLDLHGGQSD 156 Query: 116 LQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 L +LRHVSPAF EDPLR LR +FAAR+ F +A ET A+ R + E + L Sbjct: 157 LDEGILRHVSPAFAEDPLRPLRAMQFAARFR---FHLAPETAAMCRTLV--AEADTLPAS 211 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+W E + R+P L D G L +PE+ AL P +WHPE D +HTL Sbjct: 212 RIWIEWQKWSHARSPSCGLIALHDSGWL-ACYPELQALQQCPQDPRWHPEGDVWVHTLQV 270 Query: 236 LSMAAMLSPQVDVR--------FATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQL 284 + AA ++ + + FA LCHDLGK T P+ GH AGV L +L Sbjct: 271 VDQAAEMAKKHHLSRPDREHLLFAALCHDLGKPETTVQQPDGRIGSPGHSKAGVPLTRRL 330 Query: 285 CQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWR-KPQRVEQLALTSE 343 QR+ P I + + + H + H F + + +L AWR +P +E + E Sbjct: 331 LQRMHAPGAIGKIVVPLVQEH-ITHLFGDPTARAVRRL-----AWRLQPAHIELWEMLVE 384 Query: 344 ADVRGRT 350 AD GR Sbjct: 385 ADASGRA 391 >UniRef50_A6Q8W0 Polynucleotide adenylyltransferase/metal-dependent phosphohydrolase n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8W0_SULNB Length = 485 Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 136/411 (33%), Positives = 197/411 (47%), Gaps = 66/411 (16%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA------GYQQVGRDFPVFLHPQTHE 56 + LVGGAVRD ++G VKD D V G T + L++ QVG+ F + Sbjct: 25 VLLVGGAVRDMVMGQDVKDYDIEVYGLTTLDELESVLSKFGSVSQVGKHFGIVKLRIGDV 84 Query: 57 EY--ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGL 113 EY + RTERK+G G+TGF + ++ RRD TINA+ + EI+DP+ GL Sbjct: 85 EYDFSFPRTERKTGRGHTGFEVEIDGMLDFKEAAHRRDFTINAIGYNIKTYEILDPFGGL 144 Query: 114 GDLQNRLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 D++ ++LRH+ + F EDPLRV R +FAAR+ GF +A+ T L ++M +G LE L Sbjct: 145 NDIRYKILRHIDDSTFIEDPLRVYRAIQFAARF---GFDVAENTAVLCKQMVASGVLEEL 201 Query: 173 TPERVWKETESALTTR-NPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ER+++E + L P + F ++R+ G F E+ AL VP K+HPE D H Sbjct: 202 PKERIYEEWKKLLLKAPKPSMGFGLMREWGITEHCFLELHALIDVPQDTKYHPEGDVWTH 261 Query: 232 TLMTL-SMAAMLSPQVDVR--------------------------FATLCHDLGKGLTPP 264 T++++ +MA++L+ + V FA LCHD GK +T Sbjct: 262 TMLSIDAMASILNKEEKVESRSCRVLSPDSTTDKHRNEKRALKLLFAELCHDFGKPMTTT 321 Query: 265 --ELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHT-FPM----LNPK 317 E + GH AG++ RL E HD I + P+ L P Sbjct: 322 VEEGCIKAIGHEKAGIEPTRSFMYRL-------------TEEHDFIESILPLVEHHLKPS 368 Query: 318 TIVKLFDSIDAWRK---PQRVEQLALTSEADVRGRTGFESAD--YPQGRWL 363 K A R+ +E L L ++AD GRT E+ Y G WL Sbjct: 369 QFYKQGAKASAIRRLATKVNIEDLVLVAKADFLGRTTPEAKKGVYEAGEWL 419 >UniRef50_D2L6A0 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L6A0_9DELT Length = 397 Score = 169 bits (427), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 120/313 (38%), Positives = 163/313 (52%), Gaps = 34/313 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQVGRDFPVFLHPQTHEEY 58 MK YLVGGAVRD LLG PV D+D+++V +TP+ L +QVG+ FPVF+ +Y Sbjct: 1 MKRYLVGGAVRDILLGRPVVDQDYLIVDATPEAFLRRYRRARQVGKTFPVFMLGSA--QY 58 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYN----GLG 114 A R + + +DL RDLTINA+A D+ +I + L Sbjct: 59 AWPRGD------------------DINEDLLARDLTINAMAMGDSRQIAGRLHFHPLALT 100 Query: 115 DLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 DL++R+LR + +DPLRV R ARFAA F E LA M+ + G L + Sbjct: 101 DLRDRILRPCGEMSMFDDPLRVYRAARFAASLPD--FSPHPELLAQMKAVAACGVLSDIF 158 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA-PAKWHPEIDTGIHT 232 ERV +E AL P FF +L + G L PE++A VPA PA+ H +G Sbjct: 159 AERVAQEVRKALDAPKPSRFFALLAETGCLLPWMPELEAARHVPAGPAEHH----SGSVF 214 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 MA L+ + + +CHDLGK TP WPRHHGH AG + E+L +RL++PN Sbjct: 215 AHMCDMADQLAGKPIAGWMAVCHDLGKTRTPECEWPRHHGHDEAGADVAEELGKRLKLPN 274 Query: 293 EIRDLARLVAEFH 305 +R+ A FH Sbjct: 275 RVRESGVAAARFH 287 >UniRef50_B0AC07 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AC07_9CLOT Length = 450 Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 135/409 (33%), Positives = 199/409 (48%), Gaps = 49/409 (11%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLD-----AGYQQVGRDFPVFLHPQTHEEY 58 + VGG VRD +LG+ +KD D V ++++ Q++G F VF + Sbjct: 24 FFVGGCVRDEILGIDIKDVDIEVHNIEVEDLVKILESIGDVQKIGSFFGVFNLKGYDIDI 83 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQ 117 A+ R E+ +G G+ F + P + ++ RRD TIN+L +D +GEIID +NG+ DL Sbjct: 84 AMPRKEKSNGRGHKDFEIFVDPFIGYKEAALRRDFTINSLMKDVLSGEIIDSFNGIEDLN 143 Query: 118 NRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 N+++RHV+ +F EDPLRV R ++FA+R+ F I ++T L M ++ L ER Sbjct: 144 NKIIRHVNDESFCEDPLRVFRGSQFASRF---DFEIYEKTKLLSSTM----DVSSLAFER 196 Query: 177 VWKETESALTTRN-PQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 V+ E + AL N P +FF+ L+D L F E++ L G+ HPE D HT+M Sbjct: 197 VFDELKKALLKANKPSIFFKSLKDMNQLSYWFKEVEDLIGINQSEIHHPEGDVFTHTMMV 256 Query: 236 LSMAAMLSPQVDVR----FATLCHDLGKGLTPPELWPR--HHGHGPAGVKLVEQLCQRLR 289 L AA L + + A LCHD GK +T + +GH V L + L RL Sbjct: 257 LDEAAKLRDKAKNKLAFMLAALCHDFGKTVTTEIKKGKLTAYGHEVESVTLAKGLLDRL- 315 Query: 290 VPNEIRDLARLVAEFHDLI--HTFP--MLNP---KTIVKLFDSIDAWRKPQRVEQLALTS 342 N+I L E +LI H P M N K+++KL W L L + Sbjct: 316 -TNKI----SLKKETLNLIKLHMKPNQMYNSAKKKSMMKL------WDDAIHPSDLILLA 364 Query: 343 EADVRGRTGFESADYPQ-----GRWLREAWEVAQ--SVPTKAVVEAGFK 384 +AD GR DY + + L E E+ V K ++E G K Sbjct: 365 KADALGRG--VKKDYSEIESILNKSLNEYKELMLEPEVVGKDLIELGLK 411 >UniRef50_C7N377 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N377_SLAHD Length = 454 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 151/439 (34%), Positives = 211/439 (48%), Gaps = 50/439 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM----LDAG-YQQVGRDFPVFLHPQTHE 56 + + VGG VRD LLG KD D V G E+ + G +G F +F Sbjct: 22 RTFYVGGMVRDRLLGRENKDIDIEVHGIPADELGRILSELGEVTAMGASFGIFGLKHYDV 81 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 + A+ R E +G G+ F + P + E RRD T+NAL +D GE++D + G D Sbjct: 82 DIAMPRKENATGRGHKDFEVFTDPFLGPEKAAMRRDFTMNALMEDVLTGEVLDFFGGQED 141 Query: 116 LQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++ ++RHV+ F EDPLRVLR A+FAAR+ GFR+ADET+AL M +L L+ Sbjct: 142 MRRGVIRHVNDRTFAEDPLRVLRAAQFAARF---GFRVADETVALSSRM----DLSALSS 194 Query: 175 ERVWKETESA-LTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E + A L P +FF +R L V FPE+ AL GV +HPE D HT+ Sbjct: 195 ERIVGEMDKAMLKAAKPSIFFNEMRAMDQLDVWFPELKALIGVEQEPAFHPEGDVWNHTM 254 Query: 234 MTLSMAAMLSPQVD----VRFATLCHDLGKGLTPPEL--WPRHHGHGPAGVKLVEQLCQR 287 + +AA L Q +A+L HDLGK +T + R GH GV + + R Sbjct: 255 RVVDLAAGLRGQASNPRYFMYASLVHDLGKIVTTQVIDGRIRAFGHEYEGVPIAKTFLGR 314 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPML------NPKTIVKLFDSIDAWRKPQRVEQLALT 341 L NE L R L H P + K +KLFD + E L L Sbjct: 315 L--TNE-SGLIRYATNMMTL-HMRPNMLAAQHAGRKPYMKLFD------ESVSPEDLLLL 364 Query: 342 SEADVRGRTGFESADYPQGRWLREAWEVAQS------VPTKAVVEAGFK-GVEIREELT- 393 SEAD GR +S+ Y G L+E + V + +++AGF+ G + E L Sbjct: 365 SEADFCGRD-VDSSTYTYGAILQENLAFYRDAMAKPFVQGRDLIDAGFEPGPDFGEALEL 423 Query: 394 --RRRIAAVASWKEQRCPK 410 + RI+ V+ KE P+ Sbjct: 424 GHKLRISLVS--KEHALPQ 440 >UniRef50_C4XGZ8 Putative tRNA nucleotidyltransferase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGZ8_DESMR Length = 391 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 121/330 (36%), Positives = 165/330 (50%), Gaps = 32/330 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQVGRDFPVFLHPQTHEEY 58 MK YLVGGAVRD LLG PV D+D+++V +TP+ + +QVG+ FPVF+ +Y Sbjct: 1 MKRYLVGGAVRDILLGRPVVDQDYLIVDATPEAFVRRYRRARQVGKTFPVFMLGSA--QY 58 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYN----GLG 114 A R + ++ +DL RDLTINA+A D+ EI + L Sbjct: 59 AWPRGD------------------SVAEDLLARDLTINAMAMGDSREIAGRLHFHPLALS 100 Query: 115 DLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 DL++R LR + +DPLRV R ARFAA F E +A MR + G L + Sbjct: 101 DLRDRWLRPCGEMSMFDDPLRVYRAARFAASLPD--FSPHPELVAQMRAVAACGVLGDVF 158 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERV +E AL T P FFQ+L D G L PE++A VPA H + H L Sbjct: 159 AERVAQEVRKALGTTKPSRFFQLLADTGCLLPWLPELEAARHVPAGPPEHHDGSVFDHML 218 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 M +L+ + +CHDLGK TP WPRHHGH G + +L +RL++PN Sbjct: 219 ---DMVDILAGDALAGWMAVCHDLGKIATPECEWPRHHGHDDRGEGVAGELGRRLKLPNR 275 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLF 323 +R+ A+ H + L T V + Sbjct: 276 VREAGEAAAKLHMKAARYHELRAGTRVDML 305 >UniRef50_D1U5B9 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5B9_9DELT Length = 370 Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 115/327 (35%), Positives = 161/327 (49%), Gaps = 30/327 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLD--AGYQQVGRDFPVFLHPQTHEEY 58 M +YL GGAVRD LLG P+ DRD++V G+T QE D ++VGR FPVFL Sbjct: 1 MNVYLAGGAVRDLLLGRPINDRDYLVTGATRQEFTDRFPNSREVGRTFPVFL-------- 52 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 G +V +E +L+ RDLT+NA+ D++G++I + L DL + Sbjct: 53 ------------LDGLEFSFPREVAVEQELRSRDLTVNAMLLDEDGDLICHPDSLDDLHS 100 Query: 119 RLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R LR S +F DPLRV R ARF A+ F DE + MR + G L L +RV Sbjct: 101 RTLRPASRQSFLSDPLRVFRAARFWAKLP--DFTPHDELVETMRLVADTGLLAPLPADRV 158 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA-PAKWHPEIDTGIHTLMTL 236 +ET AL T +P + ++L G L F E +PA P +H + D HT + Sbjct: 159 GQETIKALQTASPGNYLRLLGRAGCLEPWFKEFKESMNIPAGPLPYH-DTDVLEHTCRVM 217 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 A V + LCHD+GK TP ++ P HH H G + + L +R+R+ N Sbjct: 218 DSLAGDGMAV---WMGLCHDIGKTSTPKDILPSHHDHDQRGADMADTLARRIRLSNAHAL 274 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLF 323 R A++H + L P T V + Sbjct: 275 AGRKGAQWHMTAARYRELRPGTKVDML 301 >UniRef50_A2PXU3 tRNA nucleotidyltransferase n=2 Tax=Vibrio cholerae RepID=A2PXU3_VIBCH Length = 170 Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 79/167 (47%), Positives = 104/167 (62%) Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 M A+ LS + VRFA HDLGKG+TPP WP H H G+ ++E LC+R+RVPNE Sbjct: 1 MVAKQASQLSDSLPVRFAAQVHDLGKGVTPPSEWPSHKLHCHTGLNIIESLCERIRVPNE 60 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 RDLA V H IH L P T +K+ +D WRKP+R+EQ+ L EAD RGR G E Sbjct: 61 FRDLALAVCAQHSNIHRADELKPATKLKVLGLLDVWRKPERLEQVLLCCEADHRGRLGLE 120 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 S YPQ A++ A V +AV+ GF+G +I+EEL +RR++A+ Sbjct: 121 SEPYPQREIFLRAYQAALGVEVQAVIADGFQGKQIKEELDKRRVSAI 167 >UniRef50_UPI0001910309 multifunctional tRNA nucleotidyl transferase/2''''3''''-cyclic phosphodiesterase/2''''nucleotidase/phosphatase n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI0001910309 Length = 87 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 74/85 (87%), Positives = 83/85 (97%) Query: 327 DAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGV 386 DAWRKPQRVEQ+ALTSEADVRGRTGFE++DYPQGRWLREAW+VAQ+VPTK VVEAGFKG+ Sbjct: 1 DAWRKPQRVEQIALTSEADVRGRTGFEASDYPQGRWLREAWQVAQAVPTKEVVEAGFKGI 60 Query: 387 EIREELTRRRIAAVASWKEQRCPKP 411 EIREELT+RRIAAVA+WKE+RCP P Sbjct: 61 EIREELTKRRIAAVANWKEKRCPNP 85 >UniRef50_A5UUL6 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=2 Tax=Roseiflexus RepID=A5UUL6_ROSS1 Length = 459 Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 135/368 (36%), Positives = 178/368 (48%), Gaps = 38/368 (10%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA-----GYQQVGRDFPVFLHPQTHEEYA 59 LVGGAVRD LLGL D D V G Q + A VGR F V E Sbjct: 29 LVGGAVRDLLLGLTPTDIDIEVYGVDGQTLAAALAPFGRVNVVGRSFGVLKMRLDEYEVD 88 Query: 60 LARTERKSG--SGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 +A R+ TG P +T + L RRD TINALA +G++ID + G DL+ Sbjct: 89 VALPSRRHPLPDEETGALPDYDPSLTPREALARRDFTINALALTPSGDLIDYFGGRADLE 148 Query: 118 NRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R+LRH S AFG+DPLRVLR +FAAR+A R+A ET AL R + + L P+R+ Sbjct: 149 ARVLRHTSEAFGDDPLRVLRAMQFAARFA---MRLAPETAALCRTLL--SQAAGLPPDRI 203 Query: 178 WKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 W+E + AL P + L + G L L+PE+ AL G P ++HPE D HTL Sbjct: 204 WREWQKWALLGVFPSAGLRALDESGWL-ALYPELAALQGCPQHPRYHPEGDVWTHTLHVC 262 Query: 237 SMAAMLS--------PQVDVRFATLCHDLGKGLTPP------ELWPRHHGHGPAGVKLVE 282 A ++ ++ + A LCHDLGK PP + PR GH AGV L + Sbjct: 263 DAAVRIADRDALDGHERLTLIVAALCHDLGK---PPTTVIDDDGIPRSIGHSEAGVSLTQ 319 Query: 283 QLCQRLRVPNEI-RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALT 341 R+ P+ I R + LV E L H P+ + +L + P ++Q Sbjct: 320 TFLVRIGAPHWIERRVTPLVREH--LAHLNVQPTPRVVRRLAHRL----APATLQQWERL 373 Query: 342 SEADVRGR 349 EAD GR Sbjct: 374 VEADASGR 381 >UniRef50_C8X424 tRNA adenylyltransferase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X424_DESRD Length = 368 Score = 155 bits (393), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 118/326 (36%), Positives = 157/326 (48%), Gaps = 29/326 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQVGRDFPVFLHPQTHEEY 58 M+IYLVGG+VRDA LG P +DRD+VV+ +T E ++VGRD PVFL +EY Sbjct: 1 MRIYLVGGSVRDAFLGRPRQDRDYVVLQTTEDEFKRCFPRAKRVGRDSPVFL--LDGDEY 58 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQ 117 T +A D+T DL+ RDLT+NALA+D G + DLQ Sbjct: 59 ----------------TVSSAADITA--DLETRDLTVNALARDVATGTLYAHPQAETDLQ 100 Query: 118 NRLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 R+LR V A F DPLRV R ARFAA + +R+ + LA+M E+ AG L ER Sbjct: 101 RRVLRPVCAANFRADPLRVYRAARFAACWPE--WRVHSDLLAVMHEVGQAGLLSQPAAER 158 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 V E AL P F ++ G L F E +PA P +G T Sbjct: 159 VGGEVRRALQGVRPGRFLSLIVQTGCLGAWFAEWQGAEAIPAGP---PAYHSGSVLAHTC 215 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 + L+ + CHD+GK TP +LWP H+ H G + Q QRLR+P + Sbjct: 216 RVVDELAGSETAAWMGWCHDMGKAGTPAKLWPHHYRHEHRGEAMAWQQGQRLRLPKRLIR 275 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKL 322 + A +H L + L T + L Sbjct: 276 AGGIAARWHMLAGRYDALRAGTQLDL 301 >UniRef50_A1AQP2 Metal dependent phosphohydrolase n=4 Tax=Desulfuromonadales RepID=A1AQP2_PELPD Length = 404 Score = 154 bits (390), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 109/324 (33%), Positives = 161/324 (49%), Gaps = 23/324 (7%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV-GRDF-PVFLHPQTHEEYA 59 +++LVGG VRD LLG +D D +V + E+ G++ V GR P++ H++ A Sbjct: 19 RVFLVGGCVRDHLLGRGCRDID-LVAALSGDELGRCGFRLVAGRSTAPIWFR---HDD-A 73 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 E T TC A L+ DL+RRD TIN+LA D G + DP++G GD+ R Sbjct: 74 FGTIE------LTPLTCPEA----LDADLRRRDFTINSLAMDLRGNLHDPFDGRGDIMGR 123 Query: 120 LLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 LR SP F +DPLR+ R RF + G+ + E L+ + + EL + ER Sbjct: 124 FLRPCSPDTFRDDPLRIFRAFRFESD----GWSMTGECQYLIGQHQWSEELSRIPMERFS 179 Query: 179 KETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA-PAKWHPEIDTGIHTLMTLS 237 +E A + P+ FF + G PE+ + +PA P ++HPE D H++ + Sbjct: 180 REMLKACSAARPERFFLAMLKFGVGAGYLPELFRMARIPAGPLRYHPEGDLLTHSIQVMQ 239 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 A S RF L HD+GK T P +P HHGH +GV+L QLC RLR+ R+ Sbjct: 240 RVAERSTDPLARFCALFHDIGKLSTDPARYPSHHGHDRSGVELARQLCSRLRLSARYRNA 299 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVK 321 + H + + L T ++ Sbjct: 300 LAAICRLHMTFNNWEELRDGTRLR 323 >UniRef50_B1ZUE5 Polynucleotide adenylyltransferase region n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUE5_OPITP Length = 463 Score = 147 bits (370), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 120/315 (38%), Positives = 151/315 (47%), Gaps = 31/315 (9%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA-----GYQQVGRDFPVF----LHPQTH 55 LVGG VRD LLGL KD D V G+ + + A VGR F V Sbjct: 13 LVGGGVRDWLLGLEAKDFDVEVAGADFETLQRALAPFGATDVVGRSFGVIKVRSAASGAE 72 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLG 114 +++L R E K+G+G+ GF P ++ D RRD TINA+A D GE+IDP++G Sbjct: 73 YDFSLPRRESKTGAGHRGFAVAPDPQLSDADAAARRDFTINAIACDPFTGELIDPHHGQR 132 Query: 115 DLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 DL R+LRH S AF EDPLRVLR + AAR+ ++A ET AL R T A L Sbjct: 133 DLGARVLRHTSAAFVEDPLRVLRAFQLAARF---DLQLAPETAALCR--TIADTYGELPV 187 Query: 175 ERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERVW E E A P VL LR FPE+ L G P WHPE D HT Sbjct: 188 ERVWAEWEKWATKAAKPSRGLDVLEQTDWLR-HFPEVARLRGTPQEPAWHPEGDVFTHTQ 246 Query: 234 MTL-SMAAMLSPQVD-------VRFATLCHDLGKGLTPPELWPR------HHGHGPAGVK 279 + ++AA Q + A L HD GK T R GH PAG Sbjct: 247 HCVDALAANAEWQSSDPARRRLLMLAVLAHDFGKPSTTVRGEKRGAIRWISPGHEPAGGP 306 Query: 280 LVEQLCQRLRVPNEI 294 + ++ +R+ P E+ Sbjct: 307 IAKEFLRRIGAPLEL 321 >UniRef50_C3CTV2 Polynucleotide adenylyltransferase/metal-dependent phosphohydrolase n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CTV2_BACTU Length = 449 Score = 146 bits (369), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 119/400 (29%), Positives = 188/400 (47%), Gaps = 42/400 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM----LDAGY-QQVGRDFPVFLHPQTHE 56 + + VGG VRD + KD D + G TP+ + GY + G F + Sbjct: 23 RTFYVGGYVRDMFMNKESKDIDVEIYGITPETLRTILSQFGYVDEFGAFFGILKIYGVDI 82 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 ++++ R E K+ G+TGF P + KRRD +NA+ D E+ID +NG+ D Sbjct: 83 DFSMPRKEVKTDDGHTGFDVVVDPFLDTLTASKRRDFRMNAIMVDVLTEEVIDHFNGVSD 142 Query: 116 LQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +Q ++RH+ F ED LR R +FA+R+ F IA+ET+ L + + L Sbjct: 143 IQLGIIRHIDEHTFIEDELRAFRACQFASRF---NFTIAEETIDLCKGFRFS-----LPR 194 Query: 175 ERVWKETESALT-TRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+++E AL + P +FF +R+ ++ LFPE+DAL P +HPE D HT+ Sbjct: 195 ERIFEEFLKALMKSEKPSIFFSYMREMLIVKKLFPELDALIDCPQNPIFHPEGDVWTHTM 254 Query: 234 MTLSMAAMLSPQVDVRFATL----CHDLGKGLTP-----PELWPRHHGHGPAGVKLVEQL 284 M + A L A + HD+GK +T ++ R GH GV + +Q Sbjct: 255 MVIDELASLKHLSSNPLAFMLLGPTHDMGKPITTVIQEDGQITAR--GHAEEGVPVAKQF 312 Query: 285 CQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRK---PQRVEQLALT 341 +R I + RL+ +++ + P +I F S A RK +E + L Sbjct: 313 LKR------ITNDKRLIKNVLNMVENH--MRPNSIA--FGSDKAVRKLMVATNIEDIVLF 362 Query: 342 SEADVRGR-TGFESADYPQGR-WLREAWEVAQSVPTKAVV 379 EAD +GR E DY + + W + E Q+V ++ + Sbjct: 363 GEADHKGRGISEEKKDYTEVKEWFHQKIEKLQTVGEQSTI 402 >UniRef50_C1XKS4 Uncharacterized domain HDIG-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XKS4_MEIRU Length = 426 Score = 144 bits (362), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 127/364 (34%), Positives = 165/364 (45%), Gaps = 30/364 (8%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT------HE 56 +YLVGGAVRD LLG +D D+ + P+ ++ Q P L T H Sbjct: 16 LYLVGGAVRDILLGETPEDLDFAT-SAPPEVVMRLAKAQGLEAIPTGLEHGTVTILIDHH 74 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 Y + T R+ Y G A ++E+DL RRD TI A+A D G +IDPY G DL Sbjct: 75 PYEVT-TFRRDVETY-GRKARVAWGQSIEEDLARRDFTIGAIAMDAAGRVIDPYGGQQDL 132 Query: 117 QNRLLRHVS-PA--FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + +LR V PA F ED LRV+R RFAARY GF I TL R L H+ Sbjct: 133 EAGVLRAVGDPAQRFREDYLRVIRAGRFAARY---GFEIEPRTLQAARAAA-PEVLSHVA 188 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERV E + A P F + L D L+ L PE + + +WHPE D H L Sbjct: 189 IERVTAEFDKAFQNGTPSRFLRYLYDLEILQRLIPEFEDTHLLLQNPRWHPEGDVLTHVL 248 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQLCQRLRV 290 + A R+ L HD+GK T PE W +GH G L+ ++ + LR+ Sbjct: 249 QVVDRAP-----PPYRWHALLHDIGKKDTARWRPEGWYSFYGHERVGAGLIPRIARDLRL 303 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 PN +RD + H ++ F P I K A P + L EAD GR Sbjct: 304 PNHLRDELVVTTALH-MVPVFTKPTPAAIRKF----QAQAGPH-LPALRALYEADGAGRR 357 Query: 351 GFES 354 ES Sbjct: 358 SKES 361 >UniRef50_C0A6X1 Polynucleotide adenylyltransferase region n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6X1_9BACT Length = 499 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 123/323 (38%), Positives = 152/323 (47%), Gaps = 43/323 (13%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVG---STPQEMLD--AGYQQVGRDFPVFLHPQTHEEY- 58 LVGG VRDALLGL KD D V G +T L VGR F V EEY Sbjct: 39 LVGGCVRDALLGLVAKDFDVEVCGVDFATLHRALSPFGATDVVGRSFGVIKLRLDGEEYD 98 Query: 59 -ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGE------------ 105 +L R E K+G+G+ GF P +T + RRD TINA+A D + Sbjct: 99 FSLPRRESKTGAGHRGFAVEPEPGLTDAEAAARRDFTINAIAWDPFADAGGGGGRREGGG 158 Query: 106 -IIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 +IDP+ G+ DL+ +LRH S AF EDPLRVLR +FA R+ +A ET AL R ++ Sbjct: 159 GLIDPHGGVRDLRAGVLRHTSAAFVEDPLRVLRAFQFAGRF---DLTLAPETAALCRAIS 215 Query: 165 HAGELEHLTPERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH 223 L ERVW E + A + P VL + G L V FPEI AL G P WH Sbjct: 216 TT--FTELPKERVWGEWQKWAEKSPKPARGLAVLEESGWL-VHFPEIAALRGCPQEPDWH 272 Query: 224 PEIDTGIHTLMTL-SMAAMLSPQV-------DVRFATLCHDLGKGLTP-------PELWP 268 PE D HT ++AA+ + Q + A L HD GK T E W Sbjct: 273 PEGDVFAHTAFCCDALAALPAWQTLPPPRRRLLMLAMLAHDFGKPATTVRAVRAGAERW- 331 Query: 269 RHHGHGPAGVKLVEQLCQRLRVP 291 GH AGV + E R+ P Sbjct: 332 TSPGHESAGVPVAEAFLTRIGAP 354 >UniRef50_C7LRX4 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRX4_DESBD Length = 459 Score = 142 bits (357), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 122/401 (30%), Positives = 184/401 (45%), Gaps = 42/401 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--------GYQQVGRDFPVF---L 50 K + VGG VRD G KD D V G + + + G+ F V L Sbjct: 18 KAFFVGGCVRDKFFGYDSKDIDIEVYGHDFDAICEVVKGIPVVQDVFECGKSFNVVKVRL 77 Query: 51 HPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPY 110 + A+ R E +G G+ + P ++ E+ RRD ++NAL + +GEIID + Sbjct: 78 ICGADLDIAVPRREVSTGGGHKDYVILPDPSMSPEEASARRDFSMNALMETFDGEIIDFH 137 Query: 111 NGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 NG+ DL+ + LR + +F +DPLRVLR +FA R+ G R+ + T L ++ G + Sbjct: 138 NGVQDLKTQRLRAIGNSFLDDPLRVLRGMQFAGRF---GLRVEEHTAYLCALIS--GRVL 192 Query: 171 HLTPERVWKETESALTTRN-PQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 ++ ER+W E E L+ + P Q L D GA+ VL+PE+ AL G+ HPE Sbjct: 193 AMSKERIWGEWEKLLSKSDKPSFGIQFLEDTGAI-VLYPELSALDGLRQDPTHHPEGCVL 251 Query: 230 IHTLMTLSMAAMLS--------PQVDVRFATLCHDLGKGLTPPELWPR--HHGHGPAGVK 279 HT M L A ++ +V + A +CHD GK LT + R HGH AG + Sbjct: 252 THTKMVLDEGARIALKENLEHQSRVILLLACICHDFGKALTTTMVDGRISCHGHAEAGSE 311 Query: 280 LVEQLCQRLRVPNEIRD-LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQL 338 + + P +R+ +++L DLI + K + KL + I+ R L Sbjct: 312 MTAAFLDSIGAPAALREPVSQLCQHHMDLISG--DVTAKQVRKLANKIN------RSSSL 363 Query: 339 ALTSEADVRGRTGFESAD-YP----QGRWLREAWEVAQSVP 374 L V G SA YP + L +A +V + P Sbjct: 364 GLLKHLIVADNLGRGSASRYPAVVDEMMELAKAEDVTNTAP 404 >UniRef50_Q72B04 tRNA nucleotidyltransferase, putative n=4 Tax=Desulfovibrio RepID=Q72B04_DESVH Length = 383 Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 113/326 (34%), Positives = 155/326 (47%), Gaps = 29/326 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-LDAGYQQVGRDFPVFLHPQTHEEYA 59 MK YLVGGAVRD L+G ++ D S + + ++VG+ V+L Sbjct: 1 MKTYLVGGAVRDILIGRTPREHDIAFEASVAHFLQANPSARKVGKRIDVYL--------- 51 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 + E + G + DL +RD TINALA + +G + + L DL+ Sbjct: 52 IGNVEHRPVQGGD-----------IRADLLQRDFTINALALEADGTLHAHPDALADLRAS 100 Query: 120 LLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 ++R SP A DP+RVLR ARFAA+ + +A ETL MR + AG L + E+V Sbjct: 101 IIRPASPGALMADPVRVLRAARFAAQLPEMS--LAQETLEAMRAVAAAGYLAEMPCEQVC 158 Query: 179 KETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA-PAKWHPEIDTGIHTLMTLS 237 +ET AL + P+ FF L G L+ F E+ L GVPA P +H TG T+ Sbjct: 159 RETLKALGSPAPERFFISLAKGGCLQPWFAEVADLTGVPAGPPAYH----TGSAFDHTID 214 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 + L+ + LCHDLGKG TP ++ PRH GH G + L QRL + N Sbjct: 215 IMRRLAGDAFDVWLGLCHDLGKGTTPADILPRHLGHEHRGEEAATALGQRLGMSNRFIRG 274 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVKLF 323 L A H + L P T V L Sbjct: 275 GALAARMHMKAGRYDTLRPHTRVDLL 300 >UniRef50_C6E493 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=3 Tax=Geobacter RepID=C6E493_GEOSM Length = 416 Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 111/357 (31%), Positives = 165/357 (46%), Gaps = 23/357 (6%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 +I+L GG VRD LLG+ +D D + G++ V ++ E++ Sbjct: 19 RIFLTGGMVRDFLLGVECQDIDLAAAVPA-AVLASLGFRLVESKSTPNIYFSYREDFGKI 77 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 R L DL RRD +NA+A +G +IDP G DL+ R+L Sbjct: 78 EVTRLESVE------------ELTADLHRRDFRVNAMAMSLDGALIDPLGGKADLEKRVL 125 Query: 122 RHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 R +PA +DPLR+ R RF G+R+ E AL+ + + ER +E Sbjct: 126 RACTPASITDDPLRIFRAFRFECE----GWRLDGEAEALLASRDWSDAFASIPVERFSQE 181 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA-PAKWHPEIDTGIHTLMTLSMA 239 AL P FF+ + + A R PE+ + V A P + HPE D H++ L Sbjct: 182 MLKALAKPAPARFFRRMLEFQAGRNYLPEVFEMTQVIAGPPQHHPEGDLFTHSMQVLERM 241 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 A L+ V RF L HDLGK TP + P+HHGH G + C+RLR+P+ ++ + Sbjct: 242 AALTNDVTSRFCALFHDLGKLYTPKDQHPKHHGHAALGASAADAFCKRLRLPSALQRALK 301 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT-GFESA 355 ++ HD + + L T ++L ++DA K E L L AD G+ G+E A Sbjct: 302 ATSKLHDTANKWEELRDSTKIRL--AVDAV-KGGIAEFLPLQVAADCGGKMPGWEEA 355 >UniRef50_C6BVC7 Polynucleotide adenylyltransferase region n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVC7_DESAD Length = 387 Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 104/327 (31%), Positives = 158/327 (48%), Gaps = 24/327 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQVGRDFPVFLHPQTHEEY 58 +KI + GG++RD LLG KD D+++ +P+E L A + VG+ + +F E+ Sbjct: 8 LKILIAGGSIRDLLLGRSPKDLDYLIASGSPEEFLAAFPKARPVGKSYEIFYLKGL--EF 65 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + R + + D T++ DLK RD T+N+ A D++GE+ NGL DL+N Sbjct: 66 SFPRAKGNN------------TDETIDLDLKARDFTVNSFALDEDGELYAHPNGLEDLRN 113 Query: 119 RLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R+LR P F EDPLRV R A F +R+ F E +A M+ L + P+R+ Sbjct: 114 RVLRPSFPDTFKEDPLRVFRAATFISRFPE--FSPHPELIAEMKRCADNDWLADIAPDRI 171 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA-PAKWHPEIDTGIHTLMTL 236 E AL+ P F ++L L F E + +PA P ++H + G HT + Sbjct: 172 GVELRKALSGPKPGNFLRLLIQGNCLEPWFSEFNGSDNIPAGPPEYHDKSVAG-HTAEIM 230 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 A + + + HDLGK LT ++ P H+GH AG+ ++L RL +P + Sbjct: 231 DEVA---GEPLTCWMAMSHDLGKVLTTADILPSHYGHDKAGMIPAKELGSRLMLPVKFIR 287 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLF 323 AE H + L P T V L Sbjct: 288 AGESAAELHMKAGNYQELRPGTKVDLL 314 >UniRef50_C7LX86 tRNA adenylyltransferase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LX86_DESBD Length = 367 Score = 140 bits (354), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 121/333 (36%), Positives = 167/333 (50%), Gaps = 35/333 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLD--AGYQQVGRDFPVFLHPQTHEEY 58 MKIYLVGGAVRD + G D D+V +G +E+ G +VG+ PVF+ + +Y Sbjct: 1 MKIYLVGGAVRDQVRGQEPVDLDFVAIGGDERELRQRVPGLTRVGQGIPVFV--RGSRQY 58 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 L + F+ ++EDDL RDLTINALA+D++GEI+ L DL Sbjct: 59 TL-----------SDFS-------SIEDDLCSRDLTINALARDESGEIVAHPRALSDLHE 100 Query: 119 RLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 ++LR V+PA F DPLR +R ARFAA + F + + + MR +T L + ERV Sbjct: 101 KILRPVAPANFLADPLRAIRAARFAAAFPD--FAVHAQLVEAMRGVT-VEALAQVAAERV 157 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA-PAKWHPEIDTGI--HTLM 234 +E A P F +VL+ L E +PA P ++H D + HT Sbjct: 158 GQEVLKACAASVPGNFLRVLQAGDKLAPWLAEFRDAHAIPAGPPRFH---DASVLEHTAR 214 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + A V + LCHDLGK +T PEL P HHGH G + + L +RLR+PN Sbjct: 215 VMDRCAGDGLGV---WMALCHDLGKTVTAPELLPHHHGHEAVGPDMAQSLARRLRLPNRH 271 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSID 327 RL A +H + L P T V+L +D Sbjct: 272 GAAGRLAARWHMAAGCYDGLKPSTRVRLLLELD 304 >UniRef50_B0N1P8 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N1P8_9FIRM Length = 451 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 113/365 (30%), Positives = 178/365 (48%), Gaps = 32/365 (8%) Query: 4 YLVGGAVRDALLG--LPVKDRDWVVVGSTPQEM--LDAGY---QQVGRDFPVF-LHPQTH 55 +LVGG VRD L+ + D D V G + E+ L A Y +G+ F + L + Sbjct: 26 FLVGGIVRDMLIYNRVDYHDVDVEVYGLSVDELEELLANYGNVNSIGKSFGILKLDVLPN 85 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLG 114 ++AL RTE K+G + F ++ L+ RRDLTINAL + G+I D ++G Sbjct: 86 FDFALPRTEIKTGESHQDFDVTVNQNLDLKVAASRRDLTINALMYEIKTGKIYDFFHGQE 145 Query: 115 DLQNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 D++ R LR VS F EDPLRVLR A+FA+R L F I T + ++M L+ L+ Sbjct: 146 DIEKRTLRMVSETTFIEDPLRVLRTAQFASR---LDFCIETATKLMCKKMVQNKSLDKLS 202 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERV++E L ++ P + L++ ++ L+P +D L +HPE D HTL Sbjct: 203 KERVFQEYSKLLLSQQPSIGLTFLKE---IKALWPCLDVLSKTMQRLDYHPEGDVWRHTL 259 Query: 234 MTLSMAAML----SPQVDVRFATLCHDLGKGLTPPELWPRHH-GHGPAGVKLVEQLCQRL 288 + +AA+ S + ++ L HD+GK + H GH AGVK+ Q + Sbjct: 260 LVTDLAALCCHKTSNPLGFMWSALLHDIGKATVTTK--DGHAPGHNEAGVKIFNQEVKAF 317 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPK----TIVKLFDSIDAWRKPQRVEQLALTSEA 344 +++ + + +H +H M+ + + K+ ID +E L L ++ Sbjct: 318 IPDKQLQKYIKTMIFYH--MHLMNMVRNEAKDYSYFKILKGIDG---IVTIEDLILITKC 372 Query: 345 DVRGR 349 D GR Sbjct: 373 DKLGR 377 >UniRef50_UPI000196A9FA hypothetical protein CATMIT_01143 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196A9FA Length = 460 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 115/367 (31%), Positives = 171/367 (46%), Gaps = 25/367 (6%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVV---VGSTPQEMLD--AGYQQVGRDFPVFLHPQTHE- 56 +YLVGG VRD LL KD D V + +E+L Q +G F V +H T E Sbjct: 25 VYLVGGCVRDFLLKRKSKDIDVEVHHLSFAALKEVLSPFGTVQVMGAAFAV-VHLSTLEG 83 Query: 57 -EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLG 114 E+AL R E K+G + F PD+ LE RRD TIN++ D + G +ID Y+G Sbjct: 84 YEFALPRIEEKTGLKHQDFNVIVDPDLPLEKACARRDFTINSMLYDIETGTVIDFYSGQK 143 Query: 115 DLQNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 DL+N +LR + F EDPLRVLR A F +RY GF++ +T L + + G L+ L+ Sbjct: 144 DLKNGILRATNGNHFSEDPLRVLRGASFMSRY---GFKMDPDTKNLCQSIVEEGGLDTLS 200 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER++ E L P LRD L ++D +HPE HT+ Sbjct: 201 TERIYTEYCKILMGLYPSQGLNFLRDIHGLPFYLQDLDT---THQRTDYHPEGSVWNHTM 257 Query: 234 MTLSMAAMLSPQVD----VRFATLCHDLGKGL-TPPELWPRHHGHGPAGVKLVEQLCQRL 288 + +AA+ ++ L HD+GK L T PE +GH G L ++ + Sbjct: 258 LVTDLAALCKHHTSEPLWFMWSALLHDIGKPLVTTPE--GHAYGHAEEGAALFDEKVDLI 315 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 + R + ++ ++H ++ TF N +K + A + ++ L + D G Sbjct: 316 LSHKQKRYIYTMI-QYHMVLPTFSR-NHARKIKFLRFLKAIDQKAPLKDLLYLARCDKLG 373 Query: 349 RTGFESA 355 R SA Sbjct: 374 RGMVTSA 380 >UniRef50_D1ND14 tRNA nucleotidyltransferase (Fragment) n=1 Tax=Haemophilus influenzae HK1212 RepID=D1ND14_HAEIN Length = 138 Score = 131 bits (329), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 59/137 (43%), Positives = 82/137 (59%) Query: 253 LCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFP 312 +CHDLGK LTP + P H+GH AG+K LC+RL+VP+ ++LA L EFH IH Sbjct: 1 ICHDLGKALTPQNILPHHYGHEQAGIKPTRSLCKRLKVPSYFQELAELTCEFHTHIHKAF 60 Query: 313 MLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQS 372 L +T++ LF+ D WRK QR ++ AD RGRTGFE+ DYPQ ++ + A Sbjct: 61 ELRAETVITLFNRFDVWRKSQRFQEFLQVCLADTRGRTGFETKDYPQIDYINQLLHSANE 120 Query: 373 VPTKAVVEAGFKGVEIR 389 V + V+ GF+ I+ Sbjct: 121 VDVQQVIADGFEKQAIK 137 >UniRef50_C6X292 tRNA nucleotidyltransferase n=24 Tax=Bacteroidetes RepID=C6X292_FLAB3 Length = 506 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 99/310 (31%), Positives = 159/310 (51%), Gaps = 34/310 (10%) Query: 4 YLVGGAVRDALL--GLPVKDRDWVVVGS-------TPQEMLDAGYQQVGRDF--PVFLHP 52 Y+VGG VRD L+ G+P D D+V GS E+ V +++ +F H Sbjct: 63 YIVGGYVRDLLMKRGVP-SDIDFVTEGSGIDLAQALANEINPRWKVSVFKNYGTAMFKHN 121 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA----QDDNGEIID 108 E+ AR E + A TLEDD KRRD T+NALA +++ GE+ID Sbjct: 122 GLDLEFVGARKESYAEDSRNP----AVEAGTLEDDQKRRDFTVNALAISLNKENFGELID 177 Query: 109 PYNGLGDLQNRLLR---HVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 P+ G+ DL+N+++R S + +DPLR+LR RFA+ L F+I + +LA ++ T Sbjct: 178 PFGGISDLKNKIIRTPLEPSQTYSDDPLRMLRAIRFAST---LRFKIEENSLAAIK--TE 232 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 A ++ ++ ER+ E + + P ++L G ++++ PE+ AL G+ + Sbjct: 233 AERIKIVSRERIMVEFNKIMLSEKPSAGLKILEQTGLMQIILPELTALRGIE-EVEGQTH 291 Query: 226 IDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPEL----WPRHHGHGPAGVKLV 281 D HTL + + + + +R+A L HD+GK T + W HGH G K+V Sbjct: 292 KDNFWHTLEVVDNISKNTDSLWLRWAALLHDVGKAPTKKFVEGTGWT-FHGHEFLGSKMV 350 Query: 282 EQLCQRLRVP 291 + + QRL++P Sbjct: 351 KTIFQRLKLP 360 >UniRef50_C1F9R3 tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9R3_ACIC5 Length = 462 Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 133/420 (31%), Positives = 191/420 (45%), Gaps = 49/420 (11%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLD--AGYQQVGRDFPVFL-------HPQT 54 Y GG VRD LLG P KD D V + P +L VG F V L P T Sbjct: 35 YFAGGCVRDMLLGHPPKDYD-VTTRARPDVVLALFPRTYAVGAHFGVVLVADEIDGQPIT 93 Query: 55 HEEYALARTERKSGSGYTGF--TCYAAPDVTLEDDLKRRDLTINALAQDD---------N 103 E T R G+ G + A D EDD+ RRD TIN + D + Sbjct: 94 TE----VATFRSDGAYLDGRRPSEVAFADRP-EDDVLRRDFTINGMLLDPEKWQQTGSLD 148 Query: 104 GEIIDPYNGLGDLQNRLLR---HVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALM 160 ++D +G DL ++R H F ED LR+LR RFAAR+ G+ + ET A + Sbjct: 149 DAVLDFVDGRADLSAGIVRAIGHAERRFTEDKLRMLRAVRFAARF---GYELEPETFAAL 205 Query: 161 REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPA 220 R++ A + ++ ERV E LT + + F++L G LR + PEID L GV P Sbjct: 206 RQL--APGIAQVSRERVRDELTRMLTEGHARHAFELLDASGLLREVLPEIDRLHGVEQPP 263 Query: 221 KWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT----PPELWPRHHGHGPA 276 ++HPE D +HTL+ L A P + + L HD+GK T P + R GH Sbjct: 264 QYHPEGDVWVHTLLLLEKLAPGCPAT-LAWGALLHDVGKPATFERAPDRI--RFSGHVEV 320 Query: 277 GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLF--DSIDAWRKPQR 334 GVK+ ++C+RLR N+ + + E H + P T+ + F D + R Sbjct: 321 GVKIAAEICRRLRFSNDETEQILALVENHMRFGDIQRMKPSTLKRFFRLPGFDEHLELHR 380 Query: 335 VEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELT 393 ++ L+S D+ T +E A EA V + ++EAG++ G + R+ L Sbjct: 381 ID--CLSSHGDL---TLYEFAQQQYHALPPEAVRPPLLVTGRDLIEAGYQPGPQFRQWLA 435 >UniRef50_Q2LST9 Poly A polymerase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LST9_SYNAS Length = 495 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 108/303 (35%), Positives = 146/303 (48%), Gaps = 44/303 (14%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ---VGRDFPVFLHPQTHEEYAL 60 + VGG VRD L G+ D D +V S E + A + + VG F + + + + + Sbjct: 86 WFVGGCVRDYLRGVEAGDYD--IVTSASPEAIQALFPRTVGVGIRFGILIVIENGYSHEV 143 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNR 119 A Y +P LED L RRD TINA+ QD D G IID G DL+ R Sbjct: 144 A--------------TYRSPGGYLEDVL-RRDFTINAMLQDPDTGRIIDEVGGRADLEGR 188 Query: 120 LLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 ++R V F ED LR+LR RFAA +L F + ETL ++ HA E++ ++ ER Sbjct: 189 VIRAVGRPDERFAEDRLRMLRAVRFAA---NLAFSVEQETLEAIQ--AHAPEIQEVSVER 243 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 V E LT ++L G L L PE+ A+ GV P K+HPE D H T+ Sbjct: 244 VADELTRLLTLGGAGEGMRLLMKTGLLEELLPEVAAMRGVKQPPKFHPEGDVWTH---TV 300 Query: 237 SMAAMLSPQVDVRFA--TLCHDLGKGLTPPELWPRHH------GHGPAGVKLVEQLCQRL 288 M ++S D R A L HD+GK P++ R H GH G L E + +RL Sbjct: 301 KMLDLMSIPADSRLAWGVLLHDVGK----PDVQSRDHRGIHFYGHVQQGEILAEGILRRL 356 Query: 289 RVP 291 R P Sbjct: 357 RFP 359 >UniRef50_Q1IUE8 Metal dependent phosphohydrolase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUE8_ACIBL Length = 454 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 109/336 (32%), Positives = 161/336 (47%), Gaps = 46/336 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFL--------- 50 + YLVGG VRD LLG D D V + P +++ + VG F V L Sbjct: 20 QAYLVGGCVRDLLLGRDPADYD-VATDAIPDQVMKIFPKTWAVGAQFGVVLVPVPDEPEC 78 Query: 51 -----HPQTHE----EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD 101 HPQ+H E A R++ G + D +D++RRD TIN + D Sbjct: 79 DPEATHPQSHHHGCIEVATFRSDGVYSDGRHPDEVRFSQDP--REDVQRRDFTINGMLLD 136 Query: 102 --DNGEIIDPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADET 156 ++ E++D G DL +++R + F ED LR+LR RFAAR+ + IA ET Sbjct: 137 PLNHDEVLDFVGGRADLAAKIIRTIGDPRQRFEEDKLRMLRAVRFAARFE---YEIAPET 193 Query: 157 LALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGV 216 +A++++++ ++ ++ ERV E LT + + F++L + G L + PEI + GV Sbjct: 194 MAVIQQLS--PQISVVSHERVRDELTKMLTEGHARRAFELLDESGLLIQVLPEIAKMKGV 251 Query: 217 PAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFA--TLCHDLGKGLTPPELWP-----R 269 P ++HPE D IHTLM L L P A L HD+GK PP R Sbjct: 252 QQPPQFHPEGDVWIHTLMLLE---QLPPNCSPTLAWGALLHDVGK---PPTFRRAPDRIR 305 Query: 270 HHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFH 305 GH GV++ E L +++R NE D + E H Sbjct: 306 FDGHVDVGVRMTEVLGKQMRFSNEQLDQVSALVENH 341 >UniRef50_B4S8E4 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=12 Tax=Chlorobiaceae RepID=B4S8E4_PROA2 Length = 489 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 98/320 (30%), Positives = 155/320 (48%), Gaps = 41/320 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 ++ YLVGG +RD LL P +D D +++G + Q GR+F VF E + Sbjct: 33 IECYLVGGYIRDVLLERPSQDIDIMIIGDPIAFAREVQKQLKGRNFVVF------ERFRT 86 Query: 61 ARTERKS-----------GSGYTGFTCYAAPDVT----LEDDLKRRDLTINALAQDDN-- 103 AR E G+ + + +T LEDDL RRD T+NALA + N Sbjct: 87 ARLELDDAVEGPVLLEIVGARKESYNPDSRKPITEIGSLEDDLSRRDFTVNALALELNAL 146 Query: 104 --GEIIDPYNGLGDLQNRLLR---HVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLA 158 I+D Y G+ L + +L+ F +DPLR++R ARF+++ L F + DETL Sbjct: 147 NRNRIVDLYGGIEALHSGILKTPLEPEKTFSDDPLRMMRAARFSSQ---LEFSLTDETLD 203 Query: 159 LMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA 218 ++ M + ++ ERV E + + P + ++L + G L+ +FPE+ A+ G+ Sbjct: 204 AIKAM--HTRISIVSRERVSHEFLKIMQSPKPSIGLKILFETGLLKEIFPELTAMAGIEQ 261 Query: 219 PAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRH-----HGH 273 + DT +HT + A S + +R A L HD+ K LT + + RH HGH Sbjct: 262 VDGLGHK-DTLLHTFQVVDKLAEKSDHLWLRVAALLHDIAKPLT--KRFSRHTGWTFHGH 318 Query: 274 GPAGVKLVEQLCQRLRVPNE 293 G +L ++ + +R P E Sbjct: 319 EVVGTRLAAKIFRSMRWPLE 338 >UniRef50_A3DF92 Metal dependent phosphohydrolase n=3 Tax=Clostridium thermocellum RepID=A3DF92_CLOTH Length = 442 Score = 122 bits (305), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 98/317 (30%), Positives = 156/317 (49%), Gaps = 35/317 (11%) Query: 1 MKIYLVGGAVRDALLG-LPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYA 59 K Y+VGG +RDA+LG +P DW V E + + ++ +T ++ Sbjct: 25 FKAYIVGGCIRDAILGKVPA---DWDVATDAQPEDVKLIFDKI---------VETGIKHG 72 Query: 60 LARTERKSGSGYTGFTCYAAPDV----TLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 T +G Y T + AP T++DDL RD TINA+A IIDP+ G+ D Sbjct: 73 TV-TAVINGCNYE-ITTFRAPSSAKIPTIKDDLGLRDFTINAMAYHPEEGIIDPFLGMQD 130 Query: 116 LQNRLLRHV-SPA--FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 ++ ++R V SP F EDPLR+LR R ++ LGF I L+ ++E + +E + Sbjct: 131 MEKSVIRAVGSPEDRFHEDPLRMLRAVRLSST---LGFEIDRSVLSAIKE--NCKLIEKV 185 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 +PER+ E L + P+ F VLR+ G L+ + PE D F +H + G+HT Sbjct: 186 SPERIRDELSKILISDRPKNFL-VLRETGLLKYVLPEFDICFDTGQNHPYHV-YNVGMHT 243 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGL---TPPELWPRHHGHGPAGVKLVEQLCQRLR 289 L T+S + + +R+ L HD+GK + T +GH V + +++ +RLR Sbjct: 244 LETVS---NIESNLVLRWTMLLHDIGKPVVKTTDQNGTDHFYGHPEESVNIADKIMKRLR 300 Query: 290 VPNEIRDLARLVAEFHD 306 N+ + + + HD Sbjct: 301 FDNKTTNKVLRLIKHHD 317 >UniRef50_A8REM2 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8REM2_9FIRM Length = 447 Score = 121 bits (303), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 156/317 (49%), Gaps = 26/317 (8%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG-RDFPV-FLH---PQTHEEY 58 ++VGG VRDA+ D D V+ + PQE + A +QQ+G P F H ++E+ Sbjct: 22 FVVGGCVRDAICKRNCHDYD-VITNALPQETI-ALFQQIGLHILPTGFAHGTLTLIYQEH 79 Query: 59 ALARTERKSGSGYTGFTCYAAPDVT--LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 + T + Y A T + +DLKRRD TINA+A +IDP+ G+ D+ Sbjct: 80 FIEITTYRKEDDYIDHRRPANISFTKSIYEDLKRRDFTINAIAYHPVHGLIDPFCGIKDI 139 Query: 117 QNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 R +R V + ED LR+LR RF+A+ L F I ++T + +THA ++++++ Sbjct: 140 HRRTIRCVGDPNKRMEEDALRILRALRFSAQ---LSFTIEEKTWQAI--LTHAMDIDYVS 194 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E L + P LR L ++ PE+ ++ P P WH D HT Sbjct: 195 KERIQAEFNQYLCSDKPNA-LHFLRAANVLELILPEMQRIYDAPQPTPWHA-YDIFTHTD 252 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPP---ELWPRHHGHGPAGVKLVEQLCQRLRV 290 + L+ + ++ + A + HDLGK L + +HGH ++ +Q ++L Sbjct: 253 IALNHSK--GYNLEKKLAIVFHDLGKPLCESFDEKGIVHYHGHAEISKEIAKQRLKQLHY 310 Query: 291 PNE-IRDLARLVAEFHD 306 N I+ + L+A FHD Sbjct: 311 SNTAIKYITTLIA-FHD 326 >UniRef50_B8HHS6 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HHS6_ARTCA Length = 557 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 100/317 (31%), Positives = 144/317 (45%), Gaps = 32/317 (10%) Query: 5 LVGGAVRDALLGLP------VKDRDWVVVGSTPQEM---LDAGYQQVGRDFPVFLHPQTH 55 +VGGAVRD LL L D D V G + +E+ L + G+ F VF Sbjct: 63 IVGGAVRDGLLSLTQGGTVDSMDVDIEVYGLSKEEVRKALPGDVNEFGQSFGVFNTSLNG 122 Query: 56 EEY--ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNG 112 +++ AL R + K+G G+ GF P++ E RRD T+NA+ D ++GE++DP G Sbjct: 123 QDFDVALPRQDNKTGDGHRGFVVDTDPNMPFEVAFARRDFTMNAMGWDAESGELVDPLGG 182 Query: 113 LGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 DL+ +LRH F EDPLRVLR +FA R+ +A ET L REM A + Sbjct: 183 RADLEAGILRHTGDKFQEDPLRVLRGVQFAGRF---NMELAPETAELCREM--APTFHQM 237 Query: 173 TPERVWKETESALTTRNPQVF--FQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGI 230 + +WK+ L+T + + L G FP + A GVP WHPE + Sbjct: 238 HKDGIWKQFRK-LSTEGTHISKALEALHASG-WEQHFPGLAATRGVPQDLTWHPEGPVHV 295 Query: 231 HTLMTLSMAAMLSPQVDVR--------FATLCHDLGKG-LTPPELWPR--HHGHGPAGVK 279 H M AA ++ + + A + HD GK T + R GH GV Sbjct: 296 HLGMAGDQAARIARRDGLDEEETSILVLAAISHDFGKAHSTKIDENGRITSGGHHETGVA 355 Query: 280 LVEQLCQRLRVPNEIRD 296 + +R+ P + Sbjct: 356 PAKDFLERIGAPQRFHE 372 >UniRef50_D1N4S4 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4S4_9BACT Length = 447 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 111/308 (36%), Positives = 151/308 (49%), Gaps = 31/308 (10%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFLHP--QTHEEYAL 60 LVGG+VRD LLG D D +V + P+E+ L A ++ VG F V L E A Sbjct: 34 LVGGSVRDLLLGKVPSDFD-LVTSAKPEELAQLFADFRAVGASFGVSLIGVGGVSLEVAT 92 Query: 61 ARTERKSGSG-YTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQN 118 AR ER G + Y A LE D++RRD TINAL D GE+ D G+ DL+ Sbjct: 93 AREERNYLDGRHPELVRYTA---DLECDVQRRDFTINALWYDPAEGEVCDCVGGIDDLER 149 Query: 119 RLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 ++R V A F ED LR+LR RFAAR L F + ET ++ + A + L E Sbjct: 150 GVVRTVGDAGRRFNEDYLRMLRAVRFAAR---LRFELFPETRRAIQAL--APKAAGLAGE 204 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E LT +P ++L D G L + PE+ AL GV P ++HPE D HTL+ Sbjct: 205 RINAEVTRMLTGPDPARAVRMLFDTGLLAAVLPEVAALDGVEQPPEFHPEGDVLTHTLLM 264 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPEL-------WPRHHGHGPAGVKLVEQLCQRL 288 LS M ++ ++ L HD+ K PE R + H G +L ++ RL Sbjct: 265 LSH--MACADANLAWSVLLHDISK----PEARTVGEDGRARFYAHESMGAELAGKILDRL 318 Query: 289 RVPNEIRD 296 + RD Sbjct: 319 HFSSADRD 326 >UniRef50_C0GPD7 Polynucleotide adenylyltransferase region n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GPD7_9DELT Length = 482 Score = 120 bits (301), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 105/342 (30%), Positives = 161/342 (47%), Gaps = 42/342 (12%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ--QVGRD----FPVFLHPQTHEEY 58 +VGGAVRD LL PV+D D + P E L ++ + GR +H H E Sbjct: 52 MVGGAVRDILLERPVRDVD--LASDMPLESLRKHFRAFETGRSRLFHTLCIVHQGQHLET 109 Query: 59 ALARTER-----KSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGL 113 L RT+ + T + + D + RD TINA+A D+ +++DP++G Sbjct: 110 TLFRTKHSLPAERPDQEDTKHSLFL-------QDARHRDFTINAMALDEQLDLLDPFHGK 162 Query: 114 GDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 DL L+R V EDPLR+LR AR A L F I ++T + + A ++ Sbjct: 163 KDLDRGLIRAVENPRERITEDPLRMLRAARLACE---LDFEIEEKTALSISGL--ARDIS 217 Query: 171 HLTPERVWKETESALTTRNPQVF--FQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 + PER+ +E + P+ ++L G L V+ PE+DAL G+ + HPE D Sbjct: 218 DVAPERLGREILKMASLSGPRFARGIRLLDRLGLLPVVLPEVDALKGLYHDPRHHPEGDV 277 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRH------HGHGPAGVKLVE 282 IHTL + + +++ A L HDLGK ++ RH GH A ++ Sbjct: 278 FIHTLRAIQCNDLAHDSLNM--ALLAHDLGK----TDIAARHPGTGFYRGHDRAAEYIIR 331 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFD 324 Q+ QRLR+P I + VA H +H + P I+++ + Sbjct: 332 QMGQRLRLPGRITRAMQAVAANHMRMHGLDEMRPSKILEMVE 373 >UniRef50_Q7P2R0 POLY(A) POLYMERASE n=10 Tax=Fusobacterium RepID=Q7P2R0_FUSNV Length = 451 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/320 (26%), Positives = 153/320 (47%), Gaps = 23/320 (7%) Query: 4 YLVGGAVRDALLGLPVKDRDWVV---VGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 Y+VGGA+RD LLGL KD D+ G+ + ++ G+ F V + +Y + Sbjct: 27 YIVGGAIRDILLGLKPKDVDFTTNLPYGTLKTLFSEYTPKETGKSFGVLRIRINNIDYEI 86 Query: 61 ARTERKSGSGYTGFTCY-AAPDVTLEDDLK----RRDLTINALAQDDNGEIIDPYNGLGD 115 A+ + + G V+ DD++ RRD TINA+A + IID YNG D Sbjct: 87 AKFRKDNYEEKDGLKIIPEEKKVSFVDDIRNDLARRDFTINAMAYNQKEGIIDLYNGQKD 146 Query: 116 LQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 ++NR++ V + EDPLRVLR RF +R L F +++ T+ +++ L+++ Sbjct: 147 IENRIINFVGKSEERIIEDPLRVLRAFRFMSR---LNFSLSENTIEAIKKQKEL--LKNI 201 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER+ E L +N + +++D G L ++ PE A + H +D H Sbjct: 202 SEERITMEFSKLLLGKNIKNTLTLMKDTGVLELIIPEFKATYDFN-QCNPHHNLDLFNH- 259 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPP---ELWPRHHGHGPAGVKLVEQLCQRLR 289 +++ + + +++R++ L HD+ K + E + H G + + R++ Sbjct: 260 --IINVVSKVPADLELRYSALLHDIAKPIVQTFDEEGIAHYKTHEIVGADMARDILTRMK 317 Query: 290 VPNEIRDLARLVAEFHDLIH 309 VP + D + + H +++ Sbjct: 318 VPVKFIDTVVEIIKKHMILY 337 >UniRef50_A0M3Q3 TRNA nucleotidyltransferase n=19 Tax=Bacteroidetes RepID=A0M3Q3_GRAFK Length = 477 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 98/309 (31%), Positives = 155/309 (50%), Gaps = 32/309 (10%) Query: 4 YLVGGAVRDALL--GLPVKDRDWVVVGS-------TPQEMLDAGYQQVGRDF-PVFLHPQ 53 Y++GG VRD +L G P KD D V VGS +++ + QV ++F L + Sbjct: 31 YVIGGFVRDHILERGEP-KDIDIVAVGSGIELAKKVSEKLPNKPKVQVFKNFGTAMLRSE 89 Query: 54 THE-EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA----QDDNGEIID 108 E E+ AR E D TLEDD RRD TINALA +D G+++D Sbjct: 90 DMEIEFVGARKESYRKDSRKPIV----EDGTLEDDQNRRDFTINALALKLNKDGFGDLLD 145 Query: 109 PYNGLGDLQNRLLRH-VSP--AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 P+NG DL+ ++++ + P + +DPLR+ R RFA++ L F I E+L ++ + Sbjct: 146 PFNGYDDLKKKIIKTPLDPDITYSDDPLRMYRAIRFASQ---LNFMIEAESLKAIK--AN 200 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 ++ ++ ER+ E + + P F +L G L+ + PE+ AL G+ + Sbjct: 201 NERIKIISKERIVDELNKIMLSDKPSKGFALLYKTGLLKKIIPELTALAGIDE-VEGQTH 259 Query: 226 IDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVE 282 D HTL + + + + +R+A L HD+GK T ++ HGH G K+V Sbjct: 260 KDNFWHTLEVVDNISENTDDLWLRWAALLHDIGKAPTKKFHKKIGWTFHGHEFVGAKMVY 319 Query: 283 QLCQRLRVP 291 +L +RLR+P Sbjct: 320 KLFKRLRLP 328 >UniRef50_C7RG10 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=4 Tax=Anaerococcus RepID=C7RG10_ANAPD Length = 450 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 103/334 (30%), Positives = 154/334 (46%), Gaps = 25/334 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM----LDAGYQQVGRDFPVFLHPQTHE 56 K + VGGAVRD+LL V D D + + P+E+ D +G+ F E Sbjct: 21 FKSFPVGGAVRDSLLSREVSDID-ITTDARPEEIEEVFRDFKLIDIGKRFGTIKVIIEGE 79 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 + + ++S L DDL+RRD TINA+A D GEIIDP+ G DL Sbjct: 80 AFEITTFRKESAYRDGRHPTEVRFSDNLIDDLERRDFTINAMAFD-QGEIIDPFGGRDDL 138 Query: 117 QNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +++R V A ED LR LR RFA R LGF I + +RE +A ++ ++ Sbjct: 139 SMKVIRAVGDARERIDEDLLRSLRAVRFANR---LGFTIEESLKEAIRE--NANKINSIS 193 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E LT+ P +++ + G L +FPE+ G + +H + D H+L Sbjct: 194 QERIASELSEILTSATPSSGIRLMDEVGLLAEIFPEVKRTVGFDQHSSYHSD-DVYNHSL 252 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRV 290 L + + VRF+ L HD+GK T R GH +++ + + L+ Sbjct: 253 KVLDKSP---ADLAVRFSALYHDVGKVYTFFLDERGEGRFFGHQNLSEEMLRKRLKELKF 309 Query: 291 PNE-IRDLARLVAEFHDLIHTFPMLNPKTIVKLF 323 N+ I D LV D +T+ K+I KL Sbjct: 310 SNKFIDDATSLVKRHMDCSNTYT---KKSIRKLL 340 >UniRef50_A5Z8C9 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8C9_9FIRM Length = 457 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 98/338 (28%), Positives = 162/338 (47%), Gaps = 47/338 (13%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-------LDAGYQQ---------VGRDFP 47 + VGG VRD +L +D D + + P+++ LD G Q VG + Sbjct: 33 FAVGGCVRDTILDREPQDWD-ITTSALPEQVKELFNRTLDTGIQHGTVTVMIKHVGYEVT 91 Query: 48 VFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEII 107 + + EY +R FT L +DLKRRD TINA+A ++ ++ Sbjct: 92 TY---RIDGEYNDSRHPES-----VEFTS------NLIEDLKRRDFTINAMAYNEREGLV 137 Query: 108 DPYNGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 D ++G+ D+ N+++R V FGED LR+LR RF+A+ LGF I ++T+ ++++ Sbjct: 138 DAFDGINDINNKIIRCVGEPEERFGEDALRILRAVRFSAQ---LGFDIDEKTMEAIKKL- 193 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHP 224 A LE+++ ER+ E E + ++NP + G +V+ PE DA+ +H Sbjct: 194 -APTLENISAERIKTELEKLIISKNPCKLITAY-NAGITKVILPEFDAMMECEQNTPYHM 251 Query: 225 EIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP-PELWPRHH--GHGPAGVKLV 281 + G HT+ + +S +R+ L HD+ K L + R+H GH G +L Sbjct: 252 -YNVGEHTIKVME---NVSADKLMRWTALFHDVAKPLVKTTDANGRNHFKGHALEGSRLA 307 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTI 319 Q+ +RL++ N+ A + E HD NP+ I Sbjct: 308 PQIMRRLKMDNKTIKTASRLIECHDDRPASKGFNPEAI 345 >UniRef50_B1I1S2 Metal dependent phosphohydrolase n=2 Tax=Clostridia RepID=B1I1S2_DESAP Length = 490 Score = 117 bits (294), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 113/359 (31%), Positives = 163/359 (45%), Gaps = 57/359 (15%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ------QVGRDFPVFLHPQTHEE 57 Y+VGGAVRD LLG K+ D V + P+E+L + + G F V EE Sbjct: 21 YVVGGAVRDLLLGREPKEFD-VCTDACPREVLTLAAENRIKAFKKGAAFGVISWILDDEE 79 Query: 58 YALA--RTERKSGSGYTGFTCYAAPDV----TLEDDLKRRDLTINALAQDDNGEIIDPYN 111 +A RTE + G + V LEDDL RRD T+NA+A +G I+DP+ Sbjct: 80 IEIATFRTE------FYGNDAHRPEKVEFVWALEDDLARRDFTVNAIAMRADGSIVDPFE 133 Query: 112 GLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G DL+ +LR V FGED LR+ R RF A Y GF +A ET A + H Sbjct: 134 GRPDLEAGVLRAVGDPEERFGEDALRMFRACRFVAEY---GFTLAPETKAAIPRALH--R 188 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRV--------------LFPEIDALF 214 + L+ ERV E L + +++R+ G L + PE+ L Sbjct: 189 VAGLSVERVRDEIYRTLMAEHAAAGLELMRETGLLSADCRGRVNGFDTAVPVLPELARLA 248 Query: 215 GVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPEL-------W 267 GV ++H + D HTL +S + + +R+A L HD+ KGL PE+ Sbjct: 249 GVAQNPEYH-QFDVWEHTLRVVS---NVPAEPALRWAALLHDVAKGL--PEVRGTNRRGL 302 Query: 268 PRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSI 326 P +GH G ++ ++ +RLR P AR V FP L + +++ S+ Sbjct: 303 PTDYGHARKGAQITGRIMERLRFPPA---FARRVTWLVRNHMRFPELEERFVLRWLKSL 358 >UniRef50_D1VT34 tRNA adenylyltransferase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT34_9FIRM Length = 445 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 87/305 (28%), Positives = 143/305 (46%), Gaps = 30/305 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHE----E 57 K Y+VGG +RD LLG+ D D + + P ++ ++V R++ +F + + E Sbjct: 18 KSYIVGGCLRDILLGIRPNDFD-ITTNARPSQV-----KEVFREYKIFHYGIKYGTITVE 71 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTL-----EDDLKRRDLTINALAQDDNGEIIDPYNG 112 Y E + ++ PD L +DDL RRD TINA+A D + I DP+NG Sbjct: 72 YRDRLYEITTFRSEGTYSDNRRPDRVLFLDSIDDDLARRDFTINAMAMDKSYNIYDPFNG 131 Query: 113 LGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 + DL+N+++R A ED LR+LR RFA R+ + ++L R + L Sbjct: 132 IRDLKNKIIRACGDANKRIEEDALRILRAIRFATRFKFYLDEELFDAISLNRNL-----L 186 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 +++ ER++ E +T NP F ++ + G L +LFP + G WH D Sbjct: 187 KNIARERIFSEICKIITYDNPSYGFLLMEETGILDILFPSLRKTVGFDQKTPWH---DRN 243 Query: 230 IHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQ 286 + + L + + + +RFA + HD+ K LT + GH G + E + + Sbjct: 244 LFDHL-LCVMDNVPNDLAIRFAAIFHDIAKPLTLKIDGDGTGHFLGHDALGATMAEDILK 302 Query: 287 RLRVP 291 + P Sbjct: 303 YYKAP 307 >UniRef50_B2UM12 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=2 Tax=Bacteria RepID=B2UM12_AKKM8 Length = 464 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 100/322 (31%), Positives = 151/322 (46%), Gaps = 31/322 (9%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEML----DAGYQQVGRDFPVFLHPQTHEEY 58 +Y VGG VRD LLG VKD D + + P E+L DA +VG F V L + + Sbjct: 28 VYFVGGCVRDRLLGYSVKDID-IATSARPDEVLRLFPDA--WEVGAAFGVVLVRREGFSF 84 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD----NGEIIDPYNGLG 114 +A T R+ GS G E+D +RRD T+N L +D G ++D G+ Sbjct: 85 EVA-TFRRDGSYRDGRRPEDVCFTDAEEDARRRDFTMNGLFEDPFSSPPGRVVDYVGGVE 143 Query: 115 DLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 D++ R+LR + F ED LR++R RFA ++ ET + + +A L Sbjct: 144 DIRARVLRCIGEPDRRFEEDSLRLMRAVRFAVTRE---VQVEKETCSSI--FRNAPLLAR 198 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++PER+ +E + L + + ++L + G ++ + PEI + G P +WHPE D H Sbjct: 199 ISPERIREELDRILLSPGRKRGVEMLVETGLMKHVIPEIYDMIGCTQPPQWHPEGDVYTH 258 Query: 232 TLMTLSMAAMLSPQVDVRFA--TLCHDLGKGLTPPELWP------RHHGHGPAGVKLVEQ 283 TLM L V ++ A L HD+GK PP R GH G + Sbjct: 259 TLMMLDALGRDGSPVSLKLALGVLLHDIGK---PPCRQVDETGRIRFSGHDKEGSSMARV 315 Query: 284 LCQRLRVPNEIRDLARLVAEFH 305 + +RL+ N + D + E H Sbjct: 316 ILRRLKYSNAVVDAVCSMVERH 337 >UniRef50_Q1Q5Z9 Similar to poly(A) polymerase n=2 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5Z9_9BACT Length = 437 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 28/301 (9%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ--QVGRDFPVFLHPQTHEEYALA- 61 GG VRD ++ D D + + P ++++ + VG + V + + + +A Sbjct: 23 FAGGCVRDMIMRRESADYD-IATNALPHDVMNLFKKTFSVGTQYGVVVVVKDGHNFEVAT 81 Query: 62 -RTERKSGSG----YTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 RTE+ G Y F+ T E+D++RRD TIN L D E++D G D Sbjct: 82 FRTEKSYSDGRHPDYVSFS-------TAEEDVRRRDFTINGLLYDPVKKEMLDYVGGRDD 134 Query: 116 LQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 + ++R + ED LR++R RFA R+ F I +ET + + A ++ + Sbjct: 135 IAAGIIRTIGDPVERLTEDKLRMIRAVRFACRF---NFHIHEETRQAIINL--APQIHVV 189 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER+ +E + +T NP + Q+L + LR + PE+ + GV P +HPE D HT Sbjct: 190 SAERIREELQKIITGPNPHLGIQLLDELCLLREILPEVSEMKGVRQPENFHPEGDVFTHT 249 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPEL-WPRHHGHGPAGVKLVEQLCQRLRVP 291 L+ LS M +P + L HD+GK T EL R + H G + ++C RL+ Sbjct: 250 LLCLS--KMENPSWTLAMGVLLHDMGKPRTFQELDRIRFNLHEKVGADITAKICNRLKTS 307 Query: 292 N 292 N Sbjct: 308 N 308 >UniRef50_B8DJQ4 Metal dependent phosphohydrolase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJQ4_DESVM Length = 471 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 114/358 (31%), Positives = 144/358 (40%), Gaps = 59/358 (16%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-LDAGYQQVGRDFPVFLHPQTHEEYA 59 MK YLVGGAVRD LLG P+ D D G T + + G ++VGRD V+L Sbjct: 1 MKTYLVGGAVRDLLLGRPIHDYDVAFEGDTACFVRQNPGARKVGRDVDVYL--------- 51 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 L E G TL++DL RD TINALA + G + L DL +R Sbjct: 52 LDGVEHMPLRG------------TLDEDLAARDFTINALALGEAGMLHAHPLALRDLADR 99 Query: 120 LLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 +LR SP A + P V F + +TL MR + G L L E+V Sbjct: 100 VLRPASPTALPDSP--VRAFRAARFAAQFPDFSVHPQTLEQMRAVAQGGALADLPAEQVC 157 Query: 179 KETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA-PAKWHPEIDTGIHTLMTLS 237 +ET AL P + +VL G L F E+ VPA PA++H H + Sbjct: 158 RETLKALAAPCPGRYLKVLHAGGCLPPWFAELAGAHEVPAGPARYH-SGSVLAHVARVMD 216 Query: 238 MAAML---------------------SPQVDVRFA-----------TLCHDLGKGLTPPE 265 MAA L SP R A LCHDLGK T + Sbjct: 217 MAAALAGHASGAGDGGPSPTGSTMTDSPGAHARPAQQPPPELVTWMALCHDLGKVTTATD 276 Query: 266 LWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLF 323 + P H+GH G L L RL +P + A H + L P T V L Sbjct: 277 VLPHHYGHEDRGAPLARALGSRLCMPTRFIEAGEAAARLHMRLARHAELRPGTRVDLL 334 >UniRef50_Q73NW9 PolyA polymerase family protein n=1 Tax=Treponema denticola RepID=Q73NW9_TREDE Length = 448 Score = 115 bits (288), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 98/312 (31%), Positives = 154/312 (49%), Gaps = 26/312 (8%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ-----VGRDFPVFLHPQTHEEY 58 YLVGGAVRD LG P KD D + + P+E + A +++ + L+ E Sbjct: 24 YLVGGAVRDWFLGKPCKDYD-IATDAEPKE-VQALFRKTIPTGIAHGTVTILYKDEKIEC 81 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQ 117 R E G + ++E+DL RRD T+NA+A +G I+DP++G+ ++ Sbjct: 82 TTFRCEADYSDGRRPQSVNYVR--SIEEDLSRRDFTMNAIAVSLKDGSIVDPFDGVKSIK 139 Query: 118 NRLLRHV-SPA--FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++ ++ V SP FGED LR +R RFA++ LGF+I +ETL + + ++ Sbjct: 140 SKTIKTVGSPLDRFGEDGLRPIRAIRFASQ---LGFKIEEETLKAIPLSIEV--CKKVSI 194 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER E L + +P + ++L D G L+V PE+ GV K D H+ + Sbjct: 195 ERFRDEFVKMLLSEHPIISLKLLEDTGLLKVFLPELSDCRGV--EQKGMHSFDVLDHSFL 252 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELW---PRHHGHGPAGVKLVEQLCQRLRVP 291 + A +P VR A L HD+GK T + + H KL +++ QRL+ P Sbjct: 253 SCDAAPQDNPI--VRLAALFHDIGKVSTREKNEYGDYTFYKHEAVSEKLTKKIMQRLKFP 310 Query: 292 N-EIRDLARLVA 302 N EI +++ LV Sbjct: 311 NKEIEEVSHLVG 322 >UniRef50_A7IIF9 tRNA nucleotidyltransferase/poly(A) polymerase family protein n=4 Tax=Proteobacteria RepID=A7IIF9_XANP2 Length = 303 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 79/258 (30%), Positives = 121/258 (46%), Gaps = 10/258 (3%) Query: 151 RIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEI 210 R ++TL LM E G L+ L P R+W E E L P + LR+CG L ++ PE+ Sbjct: 51 RADEDTLDLMFEQMEVGALDALDPVRMWAELERGLMAPAPAAMVKALRECGVLEIVLPEV 110 Query: 211 DALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRH 270 +LFGVP EID G+ L +L+ AA + ++VRFA L GK +P E P H Sbjct: 111 ASLFGVPHITDTADEIDLGVLILNSLTEAARRNAPLEVRFALLVMHAGKSDSPREHLPVH 170 Query: 271 HGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWR 330 + H G+ + +C R +P+ RDLA L + + + + + + + A+R Sbjct: 171 YRHMERGLPRIHAICDRFALPDVCRDLALLALQECERVGRVSPIRAGPVAAMLERTGAFR 230 Query: 331 KPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIRE 390 P +L L S D G E +P+ L +A AV G +G + Sbjct: 231 DPDLFAKLLLVSTCDYFGYGDKEGDTHPKVDLL-----LAARTACAAVDGEGLEG----D 281 Query: 391 ELTRRRIAAVA-SWKEQR 407 EL R A+A +++ +R Sbjct: 282 ELATARAQAIALAFRSER 299 >UniRef50_C0R197 PolyA polymerase n=2 Tax=Brachyspira RepID=C0R197_BRAHW Length = 464 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 95/327 (29%), Positives = 156/327 (47%), Gaps = 45/327 (13%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFP------------VFLH 51 +LVGGAVRD+++G+ + D DA + V R F + + Sbjct: 27 FLVGGAVRDSIMGITPHEYDITT---------DARPEDVQRIFKYTIPTGIKHGTILVII 77 Query: 52 PQTHEEYALARTERKSGSG-YTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDP 109 H E R++ G + YA ++E+DL RRDLTINA+A + +G +ID Sbjct: 78 EDMHVEITTFRSDGNYSDGRHPDHVEYAT---SIEEDLPRRDLTINAMAYNILDGSLIDM 134 Query: 110 YNGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 ++G+ D++ ++++ V F ED LR++R RFA + L F I ET +TH+ Sbjct: 135 FDGMKDIKKKIVKSVGNPYERFSEDGLRIMRAIRFATK---LDFDIEKETFD---AITHS 188 Query: 167 -GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 G L + ER+ +E L ++NP ++LR G L ++ PE+ FGV K+H + Sbjct: 189 TGMLASIAAERIREEFNGILLSKNPFRGLELLRKTGVLSLILPELMQGFGV-NQNKFH-K 246 Query: 226 IDTGIHTLMTLSMAAMLSPQ---VDVRFATLCHDLGKGLTPPELW----PRHHGHGPAGV 278 D H L T+ L + + VR A L HD+ K + ++ P ++ H G Sbjct: 247 YDVYYHILHTIQSVEPLETEELTLLVRLAALFHDIAKPMVQKKVSKQDDPVYYNHEVVGA 306 Query: 279 KLVEQLCQRLRVPNEIRDLARLVAEFH 305 + +++ +RL+ N D L+ H Sbjct: 307 NIAKKIMKRLKYSNSEIDFVTLLVRQH 333 >UniRef50_B3DZP1 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZP1_METI4 Length = 443 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 98/337 (29%), Positives = 159/337 (47%), Gaps = 34/337 (10%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVF-LHPQTHE-E 57 + GG VRD LL D D + +TP ++ + ++ +G+ F V + H E Sbjct: 20 FFAGGCVRDILLKKEPHDID-IATSATPDQVQNLFKEKASGLIGKSFGVIRVKSGAHFFE 78 Query: 58 YALARTERKSGSG-YTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 A RT+ S G + ++ P ++D RRD TIN + D G IID G D Sbjct: 79 VATFRTDIGSQGGRWPKAVQFSTP----KEDALRRDFTINGIFYDPLTGTIIDYVGGSED 134 Query: 116 LQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 ++ + +R + F ED LR+LR RFA R LGF I ++T ++ H ++ + Sbjct: 135 IEKKRIRAIGDPKIRFEEDHLRLLRAIRFAVR---LGFSIEEKTWEAIQSSAH--KITQI 189 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 +PER+ +E + T +P ++L G LR + PEI L GV P ++HPE D + Sbjct: 190 SPERIREELDKIFTGPDPAKGLELLDQSGLLRFILPEISNLHGVEQPKEFHPEGD--VFN 247 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPR-------HHGHGPAGVKLVEQLC 285 + L ++ + +P +++ A L HD+GK +T + R +GH G ++ E++ Sbjct: 248 HVLLLLSHLHNPSLELALAALFHDVGKAVT----FSRDNTGQIHFYGHETVGAQITEKIM 303 Query: 286 QRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKL 322 RLR +I H P + T+ KL Sbjct: 304 TRLRYSKDIIKKVVECVRNHMSFKDVPRMKKSTLKKL 340 >UniRef50_D1CJ19 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CJ19_THET1 Length = 484 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 100/328 (30%), Positives = 156/328 (47%), Gaps = 35/328 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEML--------DAGYQQVGRDFPVF--LH 51 ++Y VGG VRD+LLG V++ D+ + P+E+ D+ Y VG F + Sbjct: 37 ELYAVGGCVRDSLLGKEVQELDFAT-SAHPEEIKRLLAPLRPDSVYT-VGERFGTIGAIF 94 Query: 52 PQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPY 110 E R E S + ++LE+DL RRD T+NA+A D +G +IDP+ Sbjct: 95 GPYRVEITTYRGEWYSPDSRKPEVTFG---ISLEEDLSRRDFTVNAIAMDIPSGRLIDPF 151 Query: 111 NGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 G+ DL ++++R V F +DPLR++R RFA A+LGF+I T +R HA Sbjct: 152 GGVEDLHSKVIRAVGDPDARFRDDPLRLMRAVRFA---ANLGFKIEPRTAEAIRR--HAA 206 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 ++ ++ ERV E LT P V L D G ++ + PE+ L V H +I Sbjct: 207 QICKISIERVRDELTRMLTGPAPDVAIAALVDLGLMQYIVPEVVELKQVSTGGGKHKDI- 265 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDLGK----GLTPPELWPRHHGHGPAGVKLVEQ 283 IHTL + P + +R+A L HD+ K G+ ++ H H G K+ E+ Sbjct: 266 -FIHTLKVVRNT---PPDLVIRWAALLHDIAKPRTFGIRDGKVHFDH--HETIGAKMAEE 319 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTF 311 + RL + + V H +++ Sbjct: 320 ILSRLHYDRQTIEAVAKVVRMHTQANSY 347 >UniRef50_C8W673 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=38 Tax=Bacteria RepID=C8W673_DESAS Length = 584 Score = 114 bits (286), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 102/333 (30%), Positives = 157/333 (47%), Gaps = 32/333 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALART 63 +LVGG VRD L+G D D + + QE+L G+ P+ T L Sbjct: 22 FLVGGCVRDLLMGSEPADYD-IATSAAAQEILSL----FGKTVPIGERHGTIS--VLLDG 74 Query: 64 ERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRH 123 S + G+ P LE DL RD TINA+A D G DP+ G DL+ +++R Sbjct: 75 FTVEVSTFKGYVREEGPG-GLEKDLSLRDFTINAMAIDGEGGFYDPFGGQKDLEQKIIR- 132 Query: 124 VSPA------FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 SP F EDPLR++R RF + GF + +T + + HA ++ PERV Sbjct: 133 -SPGNEPEQRFIEDPLRMMRAIRFCCSF---GFSLHPDTNKAIAK-NHA-LIQRSAPERV 186 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 +E L + P + ++L + G LR + PE +L K H + D HT+ L Sbjct: 187 REELNRILISDLPSLGIRLLAETGLLRHVMPEAISLVNFDQRDKPHSK-DVFEHTMAVLE 245 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVPNE- 293 P+++VR A L HD+GK LT + +G+ G +++E + +RLR N+ Sbjct: 246 ATP---PRLNVRLAALLHDIGKTLTFSADERVTGHFYGYSLKGCRVIESILKRLRYDNKT 302 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSI 326 I +++ LV E + FP L ++ +L + Sbjct: 303 IENVSVLVGEH---MSCFPKLRDVSLKRLVKRV 332 >UniRef50_B0MLX5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLX5_9FIRM Length = 438 Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 52/329 (15%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQVGRDFP-------VFLHP-- 52 Y VGG VRD LLG +D D V + P+++++ GY+ + + HP Sbjct: 22 YCVGGCVRDYLLGQCPEDYD-VTTSALPEQIIEVFDGYRLLTVGLKHGTVTVIINKHPVE 80 Query: 53 ----QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIID 108 + EY R K GFT P+ L DDL RRDLTINA+A +D ++D Sbjct: 81 ITTYRIDGEYIDHRHPSK-----VGFT----PN--LADDLARRDLTINAIAYNDKVGMVD 129 Query: 109 PYNGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 Y G DL+N ++R V F ED LR+LR RFA+RY GF I T + Sbjct: 130 LYGGAEDLKNGIIRCVGDPMKRFDEDGLRILRALRFASRY---GFSIDKATSDAIHRQKF 186 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRD-CGALRVLFPEIDALFGVPAPAKWHP 224 L ++ ER+ E LT + +LR+ + + PE+ G +K+H Sbjct: 187 L--LSFISAERINSELCGILTGD----CYDILRNYSDVICEIIPEMYPCIGFEQHSKYHN 240 Query: 225 EIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPR-----HHGHGPAGVK 279 + G H + T++ A P V+ R L HD+GK P + + +GH K Sbjct: 241 KTVYG-HIVATVAAA---EPTVEARLTMLLHDIGK---PDSFFMKDGAGHFYGHADVSCK 293 Query: 280 LVEQLCQRLRVPNEIRDLARLVAEFHDLI 308 + E++ +RLR N+I+D + E H ++ Sbjct: 294 IAEKILERLRFSNKIKDEVLFLIENHGIV 322 >UniRef50_A5FA68 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=15 Tax=cellular organisms RepID=A5FA68_FLAJ1 Length = 495 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 96/309 (31%), Positives = 150/309 (48%), Gaps = 32/309 (10%) Query: 4 YLVGGAVRDALLGL-PVKDRDWVVVGSTPQEMLDAG-------YQQVGRDF--PVFLHPQ 53 Y++GG VRD LL KD D V VGS + L QV + + + Sbjct: 49 YVIGGFVRDLLLNRGSKKDIDVVAVGSGIELALKVSDLLPNKPKVQVFKTYGTAMLRFED 108 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDP 109 T E+ AR E + + TL+DD RRD TINALA N G+++DP Sbjct: 109 TDIEFVGARKESYTRDSRNPI----VENGTLQDDQNRRDFTINALALSLNSTNFGDLLDP 164 Query: 110 YNGLGDLQNRLLRH-VSP--AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 ++GL DL+N+ ++ + P + +DPLR+LR RFA + L F I + +L + + +A Sbjct: 165 FDGLTDLENKTIKTPLDPDITYSDDPLRMLRAIRFATQ---LNFEIEENSLNAITK--NA 219 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 ++ ++ ER+ E L+T P F +L G L ++ PE+ AL V + H Sbjct: 220 DRIKIISGERIVDELNKILSTPKPSSGFLLLYKTGLLDLILPELTALNQV-EEIEGHTHK 278 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKG----LTPPELWPRHHGHGPAGVKLVE 282 + HTL + + V +R++ L HD+GK T + W HGH G K+ + Sbjct: 279 NNFYHTLEVVDNICPNTDDVWLRWSALLHDIGKAPTKRFTKKQGWT-FHGHEFLGGKMAK 337 Query: 283 QLCQRLRVP 291 ++ +RL +P Sbjct: 338 KIFERLHMP 346 >UniRef50_B9L5K6 CCA-adding enzyme n=1 Tax=Nautilia profundicola AmH RepID=B9L5K6_NAUPA Length = 364 Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 110/193 (56%), Gaps = 17/193 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQE----MLDAGYQQVGRDFPVFLHPQTHEE 57 ++YLVGG VRD +LG+ K+ D V TP++ M G + VG+ F F++ + + Sbjct: 33 RVYLVGGCVRDEILGIKSKEFDIEVYDITPEKFDILMQKLGAKGVGKSF--FVYKWKNFD 90 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 +L RTE K G+ GF D KRRD T+NAL ++ G+I+D + G+ D+ Sbjct: 91 ISLPRTETKIAKGHKGFEVSLTQDEKTAS--KRRDFTMNALMKNIYTGKILDFWGGINDI 148 Query: 117 QNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 N++++H+ +F EDPLRVLR +FA+R L F+I +T+ L + + +L L+ E Sbjct: 149 NNKIIKHIDDISFAEDPLRVLRAMQFASR---LKFKIERKTIELCKTL----DLNELSRE 201 Query: 176 RVWKETESALTTR 188 R++ E E +R Sbjct: 202 RIFMEFEKMFKSR 214 >UniRef50_Q2RZU6 TRNA nucleotidyltransferase/poly(A) polymerase family protein n=32 Tax=Bacteria RepID=Q2RZU6_SALRD Length = 594 Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 106/331 (32%), Positives = 155/331 (46%), Gaps = 44/331 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVG-STPQEMLDAGYQQVG----RDFPVF------ 49 ++ Y VGG VRD LLG D D+V VG T + +A + +G +P F Sbjct: 69 IEAYAVGGMVRDVLLGRSTTDLDFVTVGPETGIALAEAVGEALGGRTAHVYPKFGTAAIR 128 Query: 50 -----LHPQTHEEYALARTERKSGSGYTGFTCYAAPDV---TLEDDLKRRDLTINALA-- 99 P H + AL E + + + P+V TLEDD RRD T+NA+A Sbjct: 129 IPAADALPDDHPDDALV-LEFVAARKESYRSDSRKPEVEAGTLEDDQYRRDFTVNAMAIH 187 Query: 100 --QDDNGEIIDPYNGLGDLQNRLLRH-VSPA--FGEDPLRVLRVARFAARYAHLGFRIAD 154 D G ++DP++G DL+ + + + PA F +DPLR++R ARFA L FR++D Sbjct: 188 LTPDRFGALLDPFDGRRDLERQTIDTPLDPADTFEDDPLRMIRAARFAT---QLEFRVSD 244 Query: 155 ETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALF 214 M T A +E L+ ER+ +E L P + F++L G L + PEI L Sbjct: 245 RVFDAM--GTQAHRVEILSQERITEELHKMLEADTPSIGFKILEASGVLAHVMPEIQRLK 302 Query: 215 GVPAPAKWHPEIDTGIHTLMTLSMAAMLS---PQVD---VRFATLCHDLGKGLT----PP 264 GV D HTL L A + P + +R+A L HD+ K T P Sbjct: 303 GVDV-VNGRDHKDNFYHTLEVLDNVAERTSDRPGAETRWLRWAALLHDIAKPKTKRFDPE 361 Query: 265 ELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 + W HGH G +++ L ++ R+P + R Sbjct: 362 DGWT-FHGHEDVGARMIPDLFRKWRLPTDER 391 >UniRef50_D2RM72 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RM72_ACIFE Length = 481 Score = 111 bits (277), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 108/336 (32%), Positives = 152/336 (45%), Gaps = 42/336 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEML----DAGY---QQVGRDFPV-FLHP 52 + ++VGGAVRD LLG D D VV + P+E++ DAG ++G++F V L Sbjct: 21 FQAHVVGGAVRDMLLGRTPDDYD-VVTNARPEEIIRTAEDAGIPVVSELGQNFGVVILRV 79 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 + H A GSG TLE+DL RRD TINALA D G I D ++G Sbjct: 80 ERHGVEVAAYRNETYGSGDAHRPSEVWYCKTLEEDLSRRDFTINALAVDQEGHITDCFHG 139 Query: 113 LGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETL-ALMREMTHAGE 168 L DL+ R+LR V F ED LR+ R RF + LGF L A+ R + + Sbjct: 140 LDDLRGRVLRTVGDPDRRFSEDALRMFRACRFVGQ---LGFAPDPAILPAIGRNLQ---K 193 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCG----ALRV----------LFPEIDALF 214 + L+ ERV E L ++ G + RV + PE+ L Sbjct: 194 VPGLSLERVRTELNKLLMGTYAGEGMDLMVKSGLAAESCRVRRKGQYETVPILPELTHLV 253 Query: 215 GVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGL-----TPPELWPR 269 G+ ++HP D HT + L ++V + L HD+ KGL E P Sbjct: 254 GLGQNPQFHP-YDVWKHTAVALDKG---DRSLEVGWGILLHDVAKGLEGVRGINREGQPC 309 Query: 270 HHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFH 305 HGH G L Q+ +RL++P E+ D + + H Sbjct: 310 DHGHEAVGAALARQILERLQLPREVVDRVAWLVKNH 345 >UniRef50_C3PKZ9 tRNA nucleotidyltransferase n=2 Tax=Corynebacterium RepID=C3PKZ9_CORA7 Length = 545 Score = 111 bits (277), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 110/330 (33%), Positives = 145/330 (43%), Gaps = 33/330 (10%) Query: 3 IYLVGGAVRDALLGLPVKDRDWV------VVGSTPQEMLDAGYQQVGRDFPVF--LHPQT 54 +YLVGG+VRDALLG D D+ VV S +E + + G DF + Sbjct: 108 LYLVGGSVRDALLGRLGNDLDFTTPARPDVVYSILEEWAETVWD-TGIDFGTVSAAYKGQ 166 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA----QDDNGEIIDPY 110 E R++ G Y TLE DL RRD +NA+A D E DP Sbjct: 167 QIEITTFRSDSYDGQSRNPEVMYGD---TLEGDLVRRDFKVNAMAIELRSDGTREFHDPM 223 Query: 111 NGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 GL DL R+L +F +DPLR+LR ARFAA L F +A M +M AG Sbjct: 224 GGLDDLAKRILDTPDAPEISFHDDPLRMLRAARFAA---QLEFDVAQRVRDAMIDM--AG 278 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 E++ +T ERV E + P +L D G +FPEI AL P H D Sbjct: 279 EIQRITVERVQVELNKLICGTAPWKGIDLLVDSGIADYVFPEIPALRMAPDEHAQHK--D 336 Query: 228 TGIHTLMTLSMAAML---SPQVDVRFATLCHDLGKGLTPPELWPR--HHGHGPAGVKLVE 282 H+L L A P + +R+A L HD+GK T + H H G KL Sbjct: 337 VYAHSLTVLRQAMEQEEEGPDLILRWAALLHDIGKPDTRDTTDGKVSFHHHEVVGAKLTR 396 Query: 283 QLCQRLRVPN-EIRDLARLVAEFHDLIHTF 311 + ++L+ P D+ +LV H H F Sbjct: 397 KRLRKLKFPKATTEDIGQLVY-LHMRFHGF 425 >UniRef50_A4N4C8 tRNA nucleotidyltransferase n=1 Tax=Haemophilus influenzae R3021 RepID=A4N4C8_HAEIN Length = 127 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 51/121 (42%), Positives = 73/121 (60%) Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 +C+RL++P+ ++LA L EFH IH L +T++ LF+ D WRKPQR ++ Sbjct: 1 MCKRLKIPSYFQELAELTCEFHTHIHKAFELRAETVITLFNRFDVWRKPQRFQEFLQVCL 60 Query: 344 ADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASW 403 AD RGRTGFE+ DYPQ ++ + A V + V+ GF+ I+ ELT+RRI AV Sbjct: 61 ADTRGRTGFENKDYPQIDYINQLLHTANKVDVQQVIADGFEKQAIKNELTKRRILAVKQT 120 Query: 404 K 404 K Sbjct: 121 K 121 >UniRef50_A8ZWH5 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZWH5_DESOH Length = 474 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 114/359 (31%), Positives = 154/359 (42%), Gaps = 45/359 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 K+Y+VGGA+RD L G +D D ++ P ++ V L + H Sbjct: 23 KLYVVGGALRDHLAGRLPRDVD-IICDEAPNVARCIAKARLSGAVVVKLEKKPHPP--CF 79 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ-----DDNGEIIDPYNGLGDL 116 R K+ + PD + DL+ RD T+NA+A GEIIDP G+ D+ Sbjct: 80 RVVDKNNPAESIDVVTLHPD-GIRADLEARDFTVNAMAAALLPGGRIGEIIDPLGGMADM 138 Query: 117 QNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 QNRLLR S AF DP+R+LR ARFAA L F I ETL R G L E Sbjct: 139 QNRLLRACSGTAFAADPVRILRAARFAAT---LDFTIFPETLD--RMAAAVGLLTRSAFE 193 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E L + Q+L D GAL VLFPEI A+ G H +D HTL T Sbjct: 194 RITAELFELLACPDALPHIQMLDDIGALDVLFPEIAAMKGCAQNGFHH--LDVWGHTLET 251 Query: 236 LSMAAMLSPQVDVRF----------------------ATLCHDLGKGLTP--PELWPRH- 270 L L + DV F ATL HD GK E R Sbjct: 252 LEHCERLLRRPDVLFTKNAAAFCRSMAGKNRLPVIKLATLLHDAGKPGCKIFDETKNRQV 311 Query: 271 -HGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFH--DLIHTFPMLNPKTIVKLFDSI 326 +GH G + + R+++ N +L+ H + + P + P TI + F+++ Sbjct: 312 FYGHDREGETIAGNIAHRMKLSNSDTAFLQLLVRCHMRPMALSRPGVKPATITRWFETV 370 >UniRef50_B8FTI8 Polynucleotide adenylyltransferase region n=2 Tax=Desulfitobacterium hafniense RepID=B8FTI8_DESHD Length = 529 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 91/261 (34%), Positives = 131/261 (50%), Gaps = 26/261 (9%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 Y+VGG VRD LL P KD D ++ P E L+ ++ G P+ + + + Sbjct: 18 FYIVGGTVRDHLLNRPGKDVDGII--PIPLEELEKHLREWGYH-PLKIGAKHQTLSVFQQ 74 Query: 63 TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNRLL 121 +R + + G LE D RRD TINA+ QD GE+IDP G DL+N+LL Sbjct: 75 GQRMDINFFDG---------DLEADALRRDFTINAVFQDARTGELIDPLQGREDLENKLL 125 Query: 122 RHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 R F EDP+R+LR+ RF+ +Y G I ++T + + EL+H+ ER Sbjct: 126 RACGNPWERFREDPVRILRMVRFSVQY---GMDIEEDTFRSAQSLL--PELKHVASERTS 180 Query: 179 KETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSM 238 +E LT +P ++L + G L + PE+ L G+ A ++H + D HTL L Sbjct: 181 EELGRILTLADPAAGIRLLNELGYLTLYLPELVRLQGL-AQNRYHTK-DAWEHTLQVL-- 236 Query: 239 AAMLSPQVDVRFATLCHDLGK 259 A PQ +R A L HDLGK Sbjct: 237 -ANTPPQPILRLAGLFHDLGK 256 >UniRef50_B6BGZ3 Polynucleotide adenylyltransferase region n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BGZ3_9PROT Length = 416 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 25/267 (9%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLD------AGYQQVGRDFPVFLHPQTH--E 56 ++GG +RD LL + D D V + E L+ +VG+ F V + Sbjct: 24 IIGGFIRDFLLNIDSDDIDIEVYNVSSFEKLENILKEFGSINKVGKSFGVCKLKIDNFVL 83 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 ++ L R + K SG++GF D+ +RRD TINA+ D N I+DP+NG+ D Sbjct: 84 DFTLPRIDSKISSGHSGFDVKIEKDLDFITATRRRDFTINAIGYDVVNKTILDPFNGIND 143 Query: 116 LQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 L ++ L+ V + F EDPLRVLR +F +R+ ++ E L + M L L Sbjct: 144 LNDKTLKMVDTETFIEDPLRVLRAVQFCSRF---NLKMDKELFLLSKTMIKQNSLCELAK 200 Query: 175 ERVWKET-ESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER++ E ++ L + P + F++L++ GAL+ FP + + W+ +H L Sbjct: 201 ERIYDEIKKNLLKSTKPSLGFELLKELGALKY-FPSL----ALREKQTWY----CSMHAL 251 Query: 234 MTLSMAAMLSPQVD--VRFATLCHDLG 258 + + + + + A+LC+D Sbjct: 252 DKIVQLKTTNDKTNEILMLASLCYDFN 278 >UniRef50_C6PT81 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PT81_9CLOT Length = 460 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 102/386 (26%), Positives = 180/386 (46%), Gaps = 46/386 (11%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA----GYQQVGRDFP-----VFLHPQT 54 Y+VGG VRD+L+ KD D + + P++ L+ G++ + + ++ Sbjct: 27 YVVGGCVRDSLINREPKDWD-LTTNALPEQTLEIFKTEGFRVIETGIKHGTVTILMNGNP 85 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPD-----VTLEDDLKRRDLTINALAQDDNGEIIDP 109 +E T R G + PD +L++DL RRD TIN++A +++ +ID Sbjct: 86 YE----VTTYRVDGE----YLDNRHPDNVTFTTSLKEDLSRRDFTINSMAYNEDKGLIDY 137 Query: 110 YNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADE-TLALMREMTH 165 +NG+ DL+++++R V A F ED LR+LR RF++ L F++ E T + +++ + Sbjct: 138 FNGISDLKSKIIRCVGNADERFNEDALRMLRAVRFSSE---LEFKLDFEGTFSAIKK--N 192 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 + +++ ER+ +E L + P L++ L + PEI G H + Sbjct: 193 CNLIRNISVERIREEFCKILISHKPSNGVLALKETNLLEYILPEIVPCTGFNQHNVHHDK 252 Query: 226 IDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLG--KGLTPPELWPRH-HGHGPAGVKLVE 282 D HTL L A +++R A L HD+G K T + H +GH ++ Sbjct: 253 -DIFYHTLSVLDNAP---NNINIRLAALLHDIGKPKCFTMDDKNIGHFYGHNKVSAEIAR 308 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTS 342 ++ RL+ N+ D L+ H + F + P +I K + + K + +E L Sbjct: 309 KILVRLKFDNKTIDTVYLLIYEH--MSKFDKIKPYSIKKFMNRV----KIENLESLFELQ 362 Query: 343 EADVRGRTGFESADYPQGRWLREAWE 368 AD++G E DY + L++ E Sbjct: 363 IADIKGLAE-EYRDYSKILSLKDKCE 387 >UniRef50_Q7M883 RNA NUCLEOTIDYLTRANSFERASE n=1 Tax=Wolinella succinogenes RepID=Q7M883_WOLSU Length = 379 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 77/190 (40%), Positives = 109/190 (57%), Gaps = 17/190 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTP----QEMLDAGYQQVGRDFPVFLHPQTHEE 57 K+Y VGG+VRD L P+KD D + TP M G + VG+ F F++ + Sbjct: 31 KVYAVGGSVRDFHLRRPLKDLDLEIHQITPALFESLMERLGAKGVGKSF--FVYKWQEID 88 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 +L R E K+ G+ GF A + ++ KRRD TINAL + ++GE+ D + G+ DL Sbjct: 89 LSLPRLETKTALGHRGFEVKLAS--SPKEAAKRRDFTINALMLELESGELFDFFGGMDDL 146 Query: 117 QNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 + R L +SP F ED LRVLR ARFA + LGFRIA E + LMR + E++ L+ E Sbjct: 147 KRRRLHIISPQTFQEDSLRVLRAARFA---SELGFRIAPEDIPLMRSI----EVDDLSKE 199 Query: 176 RVWKETESAL 185 R++ ET+ L Sbjct: 200 RIYHETKRLL 209 >UniRef50_A7ZE73 Multifunctional CCA protein n=4 Tax=Campylobacter RepID=A7ZE73_CAMC1 Length = 390 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 71/185 (38%), Positives = 105/185 (56%), Gaps = 17/185 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQE----MLDAGYQQVGRDFPVFLHPQTHEE 57 ++YLVGG VRDALLG + D D V P + M VG+ + F++ + + Sbjct: 43 RVYLVGGCVRDALLGREIYDYDIEVYDIKPAKFDDLMTSIKASGVGKSY--FIYKYKNYD 100 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDL 116 L R+E K+G+ + F D +L RRD T+NA+ + NGEI+D + G DL Sbjct: 101 LGLPRSESKTGNSHKDFAVSYINDPSLAS--LRRDFTVNAMMMNIFNGEILDFHGGKKDL 158 Query: 117 QNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +++ LRH+ S F EDPLRVLR +F+AR L F IA++TL LM+ + +L HL+ + Sbjct: 159 ESKTLRHIDSEKFKEDPLRVLRGVQFSAR---LDFSIANKTLELMKTL----DLAHLSKD 211 Query: 176 RVWKE 180 R+ E Sbjct: 212 RINTE 216 >UniRef50_B1KWG6 PolyA polymerase family protein n=16 Tax=Clostridium RepID=B1KWG6_CLOBM Length = 450 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 58/321 (18%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA----GYQ----------------QVG 43 Y+VGGAVRD+LL V D D + + PQE+++ GY+ +G Sbjct: 29 YIVGGAVRDSLLERKVNDWD-ITTSANPQEVMNIFENLGYKIIPTGLKHGTVTILINSIG 87 Query: 44 RDFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN 103 + F + EY R ++ FT L++DLKRRDLTINA+A +D Sbjct: 88 YEVTTF---RIDGEYEDNRRPKE-----VKFTS------NLKEDLKRRDLTINAMAYNDK 133 Query: 104 GEIIDPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALM 160 ++D ++GL DL N+++R V + F ED LR+LR RFA++ L F + + T + Sbjct: 134 TRLVDYFHGLEDLNNKIIRCVGDSKDRFNEDSLRMLRCIRFASQ---LNFHMEESTKLNI 190 Query: 161 REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPA 220 RE++ + +++ ER+ E L + P + + + + + PE+ A G Sbjct: 191 RELSR--NIANVSMERIRDELCKILVSSQPVYGIRNIVELNLVDYIIPELKACVGFEQ-H 247 Query: 221 KWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWP-------RHHGH 273 H + D H LS+ + ++++R + L HD+GK P+ + +GH Sbjct: 248 NIHHDKDVYGH---ILSVVENVPNKLELRLSALLHDIGK----PKCFSIGDNGQGHFYGH 300 Query: 274 GPAGVKLVEQLCQRLRVPNEI 294 + + + +RL+ N+I Sbjct: 301 QKISADMTKDILKRLKFDNKI 321 >UniRef50_Q47K87 Metal-dependent phosphohydrolase n=143 Tax=Actinobacteria (class) RepID=Q47K87_THEFY Length = 552 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 100/323 (30%), Positives = 151/323 (46%), Gaps = 33/323 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA------GYQQVGRDF-PVFLHPQT 54 ++ +VGG VRDALLG PV D D + + P+ +L+ +G +F V L Sbjct: 104 ELAIVGGPVRDALLGRPVHDID-LTTDAVPERVLELVDGWADAVWTIGIEFGTVGLRKNG 162 Query: 55 HE-EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA-QDDNGEIIDPYNG 112 + E R+E Y +L +DL RRD T+NA+A + GE +DP+ G Sbjct: 163 RQVEITTYRSESYQVKSRKPEVSYG---TSLYEDLVRRDFTVNAMAVRVPGGEFVDPFGG 219 Query: 113 LGDLQNRLLR---HVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 L DL +R LR +F +DPLR++R RFAA+ LGF + ++ A M M A L Sbjct: 220 LRDLADRTLRTPGKPEDSFNDDPLRIMRGIRFAAQ---LGFSVDEKVAAAMTAM--AERL 274 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 ++ ER+ E + + NP++ ++ D G + PEI L + H D Sbjct: 275 RIVSAERIRDELTKLILSPNPRLGVSLMTDLGVANYVLPEIPKL--KLTVDEHHRHKDVY 332 Query: 230 IHTLMTLSMAAML------SPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKL 280 H+L L A L P + +R A L HD+GK T P H H G + Sbjct: 333 EHSLTVLDQAVDLERARGMEPDLVLRLAALLHDIGKPKTRAFQPGGKVTFHHHEVVGASM 392 Query: 281 VEQLCQRLRVPNE-IRDLARLVA 302 + LR P + + D+++LV+ Sbjct: 393 SKNRLTALRFPKDVVNDVSKLVS 415 >UniRef50_D1C7Z9 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=2 Tax=Thermomicrobia (class) RepID=D1C7Z9_SPHTD Length = 478 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 105/328 (32%), Positives = 143/328 (43%), Gaps = 47/328 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGS-------TPQEMLDAGYQQVGRDFPV--FLHP 52 ++YLVGG+VRD LLG PV D D+ D+ Y VG F F+ Sbjct: 44 ELYLVGGSVRDLLLGQPVTDLDFATSAEPELTKAAGAAAGADSVY-TVGEQFGTVGFVFD 102 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPD--------VTLEDDLKRRDLTINALAQD-DN 103 E R E Y PD L DL RRD TINA+A D + Sbjct: 103 GVSVEITTYREEH-----------YPTPDRRPKVRLGTDLVGDLSRRDFTINAIAVDARD 151 Query: 104 GEIIDPYNGLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALM 160 G + DP+ GL DL+ R++R V F EDPLR+LR ARFA A L FR+ TLA M Sbjct: 152 GTVHDPFGGLDDLERRIIRAVGDPKARFAEDPLRILRAARFA---AQLDFRVDRRTLAAM 208 Query: 161 REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPA 220 R M +LE ++ ER+ E L +L + LR + PE+ + Sbjct: 209 RAM--GPQLERISRERIAAELNRLLIAPAAARGLALLHETDLLRWVLPEVVPMAEDTGAG 266 Query: 221 KWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPP-ELWPRHH--GHGPAG 277 + D +HTL + + P++ VR+A L HD K +T + H GH G Sbjct: 267 RHK---DIWLHTLRVVEQS---PPRLAVRWAALLHDAAKPMTRSVDARGEVHFFGHERVG 320 Query: 278 VKLVEQLCQRLRVPNEIRDLARLVAEFH 305 L + +RL+ + D + E H Sbjct: 321 ADLARKALRRLKQERALIDRVAGLVEMH 348 >UniRef50_C9RRD1 Polynucleotide adenylyltransferase region n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRD1_FIBSS Length = 426 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 78/223 (34%), Positives = 115/223 (51%), Gaps = 17/223 (7%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLD-----AGYQQVGRDFPV--FLHPQT 54 + +LVGG VRDALLG +D D V E++ VG+ F V Sbjct: 33 RAFLVGGWVRDALLGKNCRDYDVEVYDLVQDELVPILKKYGRTNLVGKAFGVIHLAMKGL 92 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGL 113 +++ RTE K G G+ GF + ++ ++ RRD TINA+ + + DPY G+ Sbjct: 93 SLDFSFPRTESKVGYGHRGFVVHTDEKLSFKEAALRRDFTINAMGMELPELTLCDPYGGI 152 Query: 114 GDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 DL+ LLRHV PAF ED LR+LR +FA+R+A ++A ET+ L R ++ LE L+ Sbjct: 153 DDLKKGLLRHVGPAFVEDSLRILRGVQFASRFA---LKLAPETIELCRTLS----LEDLS 205 Query: 174 PERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFG 215 ER+++E + L P + + D L FPE+ L G Sbjct: 206 IERLFEEFKKWLLKPGKPSLGLRAFLDI-KLNEFFPEVSPLRG 247 >UniRef50_C9XLQ0 Putative poly(A) polymerase n=6 Tax=Clostridium difficile RepID=C9XLQ0_CLODC Length = 470 Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 91/321 (28%), Positives = 157/321 (48%), Gaps = 40/321 (12%) Query: 4 YLVGGAVRDALLG-LPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT------HE 56 Y+VGG VRD LL +P DW + S E++ +++ P + T HE Sbjct: 50 YVVGGCVRDCLLERVP---NDWDITTSARPEVVVELFEKT---IPTGIQHGTVTVMIEHE 103 Query: 57 EYALARTERKSGSGYTGFTCYAAPDV-----TLEDDLKRRDLTINALAQDDNGEIIDPYN 111 + + T R G+ G PD + DL RRD TIN++A + ++DP+N Sbjct: 104 PFEVT-TYRIDGNYSDG----RHPDSIEFTNNIVKDLSRRDFTINSIAYNSKTGLVDPFN 158 Query: 112 GLGDLQNRLLRHV-SPA--FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G D+QN+ +R V +P F ED LR+LR RF+A+ L F+IA+ T + + A Sbjct: 159 GYEDIQNKYIRCVGNPVDRFEEDALRMLRAVRFSAQ---LNFKIAEGTKQSIHK--KADL 213 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 +++++ ER+ E L + + ++ +L+ G L+ + PEI L V +H D Sbjct: 214 IKNVSIERIQTEFNKILVSDSSKL--NLLKSTGLLKFIIPEICELEDVTQHNPYHI-YDV 270 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQLC 285 HTL++ ++ ++ ++ L HDLGK +T + H VK+ +++ Sbjct: 271 QKHTLIS---TEVIEDELYLKLTMLFHDLGKKVTKTTDKNGVDHFYTHSRESVKIAKKIL 327 Query: 286 QRLRVPNEIRDLARLVAEFHD 306 +RL+ N + ++ ++HD Sbjct: 328 RRLKYDNYTINKVLILIQYHD 348 >UniRef50_D1PZ77 PolyA polymerase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PZ77_9BACT Length = 509 Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 106/346 (30%), Positives = 153/346 (44%), Gaps = 68/346 (19%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGS-----TPQEMLDAG--YQQVGRDFPV--FLH 51 M+ Y+VGG VRD L P D D VVVGS T L G + V R+F Sbjct: 32 MECYVVGGYVRDLFLQRPSDDIDVVVVGSGIEVATKLRQLLGGKAHLTVFRNFGTAQVKF 91 Query: 52 PQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEII 107 E+ AR E S D TLEDD RRD TINA+A N GE++ Sbjct: 92 RGIEVEFVGARKESYSHDSRKPHV----EDGTLEDDQNRRDFTINAMAVCLNRERFGELV 147 Query: 108 DPYNGLGDLQNRLLRH-VSP--AFGEDPLRVLRVARFAARYAHLGFRIADETL-ALMREM 163 DP++GL D+++ ++R + P F +DPLR++R RFA + L F I DET AL R Sbjct: 148 DPFDGLADMEDGIIRTPLDPDITFSDDPLRMMRCVRFATQ---LKFYIEDETFEALER-- 202 Query: 164 THAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH 223 +A ++ ++ ER+ E + + P F L+ CG L ++ PE+ AL V Sbjct: 203 -NAERIKIISGERINTELNKIMLSDQPSRGFVDLQRCGLLALILPELTAL-DVVETKNGR 260 Query: 224 PEIDTGIHTL---------------------------------MTLSMAAMLSPQVDVRF 250 + HTL + + + + Q+ +R+ Sbjct: 261 AHKNNFYHTLEVVDNLCQAQQQRMERINKELAQHAPDSKEAQDLQADLEHLQANQLWLRW 320 Query: 251 ATLCHDLGKGLTPPELWPR-----HHGHGPAGVKLVEQLCQRLRVP 291 TL HD+GK T + W H H G K+V + +RL++P Sbjct: 321 GTLLHDVGK--TKTKRWDHAAGWTFHNHNYVGSKMVPGIFRRLKLP 364 >UniRef50_B7CE33 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CE33_9FIRM Length = 438 Score = 107 bits (267), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 96/306 (31%), Positives = 147/306 (48%), Gaps = 34/306 (11%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFP---VFLHPQTHEEYAL 60 Y+VGG VRD LL P+ D D + + P+ +L+ + VG V + + E Sbjct: 22 YVVGGCVRDYLLDRPIHDYD-ICTSAKPEVILNLFDRSVGTGLKHGTVTVLSNSPVEITT 80 Query: 61 ARTERKSGSGYTGFTCYAAPDV-----TLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 R E + + + PD T+E+DL RRD T+NA+A N +IDPY G D Sbjct: 81 FRLE-------SEYKDHRHPDSVKYVSTIEEDLSRRDFTVNAMAYHPNRGLIDPYKGQFD 133 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L+ +++R V F ED LR+LR RF A+ LGF + DET+ + T+A ++++ Sbjct: 134 LKAKVIRCVGNPDRRFNEDALRMLRAYRFCAK---LGFSM-DETVKKSID-TNATLIQYV 188 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER+ E + + T NPQV + L+ +F E+D + +H D HT Sbjct: 189 SIERIVHELKEIMET-NPQVLASMTL---LLKPVFNELDLALRCSQNSIYHY-TDVLHHT 243 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLCQRLR 289 L +M + + F L HDLGK T H G +L ++LC+R + Sbjct: 244 LD--AMCYLKPYDETLAFVLLFHDLGKIQVKTTDSNGKDHFKHHAKVGSELSKELCRRFK 301 Query: 290 VPNEIR 295 + NE R Sbjct: 302 LTNEQR 307 >UniRef50_Q1WU19 CCA-adding enzyme n=30 Tax=Lactobacillales RepID=CCA_LACS1 Length = 404 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 111/212 (52%), Gaps = 31/212 (14%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-------LDAGYQQVGRDFPVFLHPQTHE 56 Y VGG+VRD LLGLP+ D D + + P+E+ +D G V + L T Sbjct: 28 YFVGGSVRDTLLGLPIHDVD-IASSAYPEEIKQIFSKTVDTG---VEHGTVMVLDHGTGY 83 Query: 57 EYALARTERKSGSGYTGFTCYAAPDV-----TLEDDLKRRDLTINALAQDDNGEIIDPYN 111 E RTE + + Y PD +LE+DLKRRDLTINALA DD G+IID ++ Sbjct: 84 EITTFRTE-------STYQDYRRPDKVEFVRSLEEDLKRRDLTINALAMDDKGKIIDLFD 136 Query: 112 GLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 GL DL+N ++R V F ED LR++R RF ++ L F++ +T +++ +H Sbjct: 137 GLKDLKNGIIRAVGNPEERFHEDALRMMRAVRFGSQ---LDFKVELDTFNAIKKNSHL-- 191 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDC 200 LE + ER+ E L +NP+ Q D Sbjct: 192 LEKIAIERIHVEWVKLLLGKNPKQGLQEFLDT 223 >UniRef50_C6DY30 Poly A polymerase family protein n=2 Tax=Clostridium botulinum D str. 1873 RepID=C6DY30_CLOBO Length = 470 Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 97/371 (26%), Positives = 174/371 (46%), Gaps = 56/371 (15%) Query: 4 YLVGGAVRDALLGLPVKDRDW-VVVGSTPQEMLDAGYQQVGRD-FPVFLHPQT-----HE 56 Y+VGG VRD+LL K DW + + P E+++ ++ +G P L T + Sbjct: 54 YIVGGCVRDSLL--EKKPNDWDITTSALPNEVINI-FKNLGYTILPTGLKHGTVTIVINN 110 Query: 57 EYALARTERKSGS-------GYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDP 109 E+ T R G FT L++DL RRD TIN++A + +ID Sbjct: 111 EHYEVTTYRIDGEYEDNRHPNEVEFT------RNLKEDLNRRDFTINSMAYNHKDGLIDY 164 Query: 110 YNGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 +N DL +R+++ V F ED LR+LR RFAA+ L F+I ++TL R++ Sbjct: 165 FNSKNDLDSRIIKCVGDPVKRFSEDALRILRAYRFAAQ---LDFKIENKTLNATRQL--K 219 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 G L++++ ER+ E L T + +FFQ+ + G L+++FPE+ V + +H Sbjct: 220 GNLKNISIERIRDEINKILLT-DSTIFFQLYK-FGILKIIFPELHQCHNVEQNSPYH--- 274 Query: 227 DTGIHTLMTLSMAAMLS--PQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLV 281 + L + ++L+ P++ ++ L H + T + H H Sbjct: 275 ---MKNLFNHIINSVLNIEPKLHLKLTMLLHAICTVQCKTTDEKGIDYFHNHEELSSYKA 331 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSI--DAWRKPQRVEQLA 339 +++ +R++ N + ++ ++H+ + + K+I KL I D +R +V+ Sbjct: 332 KKILKRMKYDNNTINKVSILIKYHNR----KIDSNKSIRKLLSLIGEDNFRDLLKVK--- 384 Query: 340 LTSEADVRGRT 350 EAD++ + Sbjct: 385 ---EADIKAQN 392 >UniRef50_A0RPP8 PolyA polymerase family protein n=2 Tax=Campylobacter fetus RepID=A0RPP8_CAMFF Length = 368 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/210 (34%), Positives = 112/210 (53%), Gaps = 17/210 (8%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQE----MLDAGYQQVGRDFPVFLHPQTHEEYA 59 YLVGG VRD LLG D D V P + M D G VG+ + F++ + + + Sbjct: 31 YLVGGCVRDMLLGAKNIDFDIEVYDIDPFKFENIMHDIGATGVGKSY--FVYKYKNYDIS 88 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQN 118 L RTE K+G G+ F D + KRRD T+NA+ + NGEI+D + G D+QN Sbjct: 89 LPRTESKNGIGHKAFIVSYCNDEKIAS--KRRDFTMNAMMINIFNGEILDFWGGRKDIQN 146 Query: 119 RLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 ++L+ V +F ED LRVLR +FAAR+ G + +++L +MR ++ ++ L+ +R+ Sbjct: 147 KILKIVDKHSFCEDSLRVLRAVQFAARF---GLKADEQSLKIMRNIS----IDDLSKDRI 199 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLF 207 E E + ++L D G + LF Sbjct: 200 RSELEKFFIAPHKTFGIELLSDLGLDKRLF 229 >UniRef50_A1FAS5 Multifunctional CCA protein (Fragment) n=1 Tax=Vibrio cholerae 2740-80 RepID=A1FAS5_VIBCH Length = 98 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 54/93 (58%), Positives = 61/93 (65%), Gaps = 1/93 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IYLVGGAVRD LL LPV DRDWVVVGS+PQ ML AG+Q VG+DFPVFLHP + E+ L Sbjct: 1 MQIYLVGGAVRDQLLQLPVYDRDWVVVGSSPQAMLAAGFQAVGKDFPVFLHPNSKEDMPL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDL 93 S YTGF C P E R D+ Sbjct: 61 PVPNANQRS-YTGFACTTHPMSPREICCARSDI 92 >UniRef50_UPI0001C30E56 polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30E56 Length = 479 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 105/349 (30%), Positives = 146/349 (41%), Gaps = 52/349 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 + +LVGGAVRD LL KD D V G G FP+ E + Sbjct: 26 RTWLVGGAVRDRLLDRVTKDLDLAVDGDVEAAARGLGRAARAAVFPL------SEAFGAW 79 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNRL 120 R + G+ T+E DL +RD T+NA+A+ G+ IDP G DL R Sbjct: 80 RVVAREGAWQADLAPLTG--ATIEQDLAQRDFTVNAIAEPLAGGDPIDPTGGAADLAARR 137 Query: 121 LRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 LR VSP AF DP+RV+R+ RFA+ LG + TLA R A L + ERV+ Sbjct: 138 LRMVSPGAFSADPVRVMRLPRFAS---ELGLEVEVGTLAAAR--LDAPRLREVAQERVFA 192 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSM- 238 E + +P +++ GA + PE+DAL GV A H +D HTL L+ Sbjct: 193 ELRRVVGAPDPLHGLELMGQLGATAAVLPELDALRGVEQSAYHH--LDVHDHTLAVLAET 250 Query: 239 -------AAMLSPQ--------------------VDVRFATLCHDLGKGLTPPELWP--- 268 AA+ P+ +RF L HD+ K T + Sbjct: 251 VALEGDPAAVFGPERGERLRELLAQPFSDELSRGTALRFGALLHDIAKPQTRGVMESGRV 310 Query: 269 RHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFH----DLIHTFPM 313 H G +L ++ RLR ++R +A H L+H P+ Sbjct: 311 TFFDHDAQGAELTREILTRLRTSEKLRAHVAALARHHLRLGFLVHERPL 359 >UniRef50_B5YFC2 Poly A polymerase, putative n=2 Tax=Dictyoglomus RepID=B5YFC2_DICT6 Length = 469 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 42/320 (13%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALART 63 Y+VGG +RD LLG +D D+++ + + GR V L + +Y Sbjct: 24 YIVGGFIRDYLLGKKPQDIDFLIDPFNIDFIDNLSKILKGR--LVILDEE--RKYFRIVV 79 Query: 64 ERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNRLLR 122 + K + FT ++ LE + RRD TIN++ + N EI DP GL DL+ +L+ Sbjct: 80 KNKENTFVLDFTPIYQQNLLLE--IVRRDFTINSIVLNLRNFEIYDPLKGLKDLERNVLK 137 Query: 123 HVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKET 181 SP + EDPLR+LRV RF A GF+I +R+ ++ L + PER+ +E Sbjct: 138 LSSPDSLKEDPLRILRVFRFGAS----GFKIDKSVFESIRK--NSQRLSKIKPERIHEEL 191 Query: 182 ESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH------------------ 223 L ++ + + LR +FPE+ + +P H Sbjct: 192 YKILKNPFTSYIWKEMEEYNVLREIFPELSEMKNIPWSEPHHENPLEHSITTLYVLEELF 251 Query: 224 -------PEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGH 273 P I + + + + + + ++ A+L HD+GK T ++GH Sbjct: 252 YNIDKIFPSIKKELEKYFSEKLFSEFTKKETLKLASLLHDIGKSKTYSIDENNLVHYYGH 311 Query: 274 GPAGVKLVEQLCQRLRVPNE 293 G +++E++ +RL++ N+ Sbjct: 312 SKVGSEMLEEIAERLKLSNK 331 >UniRef50_D1AKE0 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AKE0_SEBTE Length = 583 Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 90/310 (29%), Positives = 152/310 (49%), Gaps = 23/310 (7%) Query: 4 YLVGGAVRDALLGLPVKDRDWV--VVGSTPQEML-DAGYQQVGRDFPVFLHPQTHEEYAL 60 Y+VGG+VRD LLG+ KD D+ + ST +E+ D +++G+ F + + Y + Sbjct: 23 YIVGGSVRDILLGVSPKDYDFTTNIAYSTLKELFKDYNPKEIGKHFGILMIKINGIHYEI 82 Query: 61 ARTERKSG--SGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 A+ + G +G + ++ +DLKRRD TINA+A +ID YNG D++N Sbjct: 83 AKFRKDIGILNGRHPESVKFVDEIA--EDLKRRDFTINAMAYSRKNGLIDLYNGSSDIKN 140 Query: 119 RLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +L+R V ED LR+LR RF + LGF + ET + + + +L+ ++ E Sbjct: 141 KLIRFVGDPGLRIKEDALRILRAVRFVSA---LGFDLETETKKAI--LKNKLQLKKISKE 195 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ +E L + ++++ G L ++ PEI+ L+ H + D H T Sbjct: 196 RIREEFSKILLSDYVDKGLLLMKELGILEIIIPEIEMLYEFNQNNPHHHK-DVFAH---T 251 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 +S+ + R L HD+GK T ++GH ++ +RL+ PN Sbjct: 252 VSVVKNTQKDLLTRITALFHDIGKPNTHSIDKNGISHYYGHENNSAEIASAALRRLKFPN 311 Query: 293 E-IRDLARLV 301 + IRD+ L+ Sbjct: 312 DFIRDVDVLI 321 >UniRef50_C4GD15 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GD15_9FIRM Length = 461 Score = 105 bits (261), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 105/321 (32%), Positives = 154/321 (47%), Gaps = 39/321 (12%) Query: 4 YLVGGAVRDALLG-LPVKDRDWVVVGS-TPQEM-------LDAGYQQVGRDFPVFLHPQT 54 Y VGG VRD++LG +P DW + S P+E+ +D G Q V L Sbjct: 30 YAVGGCVRDSVLGRIP---DDWDITSSACPREIKALFSHTIDTGIQH--GTVTVML---D 81 Query: 55 HEEYALARTERKSGSGYTGF---TCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYN 111 H Y L T R G G T P +T +DLKRRD TINA+A + ++D ++ Sbjct: 82 HIGYELT-TYRVDGEYLDGRHPRTVRYTPSLT--EDLKRRDFTINAMAYHPDRGLVDEFD 138 Query: 112 GLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G+GDL+ +L+R V F ED LR+LR RFAA+ LGF + +T + +R++ A Sbjct: 139 GIGDLKRKLVRCVGDPHQRFTEDALRMLRAVRFAAQ---LGFGLDADTASAIRDL--AEN 193 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 L+ ++ ER+ E + + +P ++ + G V PE DA P H D Sbjct: 194 LKKVSAERIRVELMKTICSPHPAC-LEMAYELGLTAVFLPEFDACMRTPQNTPHH-FTDV 251 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGL--TPPELWPRH-HGHGPAGVKLVEQLC 285 G HTL L M + V +R A L HD+ K + T E H GH G ++ ++ Sbjct: 252 GHHTL--LVMQGVPDDPV-LRLAALLHDIAKPVCRTTDERGVDHFKGHPKEGARMAGEIL 308 Query: 286 QRLRVPNEIRDLARLVAEFHD 306 +RLR + D + +HD Sbjct: 309 RRLRFDKDTTDRVVQLVCYHD 329 >UniRef50_B9XMC7 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=2 Tax=Verrucomicrobiales RepID=B9XMC7_9BACT Length = 440 Score = 104 bits (259), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 103/335 (30%), Positives = 156/335 (46%), Gaps = 28/335 (8%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ---VGRDFPVFLHPQTHEEYAL 60 Y VGG VRD LG KD D V + P E ++ +Q+ VGR F V + + E+ + Sbjct: 22 YWVGGCVRDYFLGREPKDFD-VATNAVP-EQVERIFQRTIPVGRKFGVLIVLEKGFEFQI 79 Query: 61 A--RTERKSGSG-YTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEII-DPYNGLGDL 116 A R E G + + P D RRD TIN L D +++ D G DL Sbjct: 80 ATFRAESDYQDGRHPEQVTFGDPKA----DASRRDFTINGLFYDPVNDVLHDWVGGEVDL 135 Query: 117 QNRLLRHV-SPA--FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + ++LR + PA F ED LR+LR RFAA+ L F+I +T A M + +A +++ ++ Sbjct: 136 KAKVLRTIGEPAERFAEDHLRLLRAVRFAAQ---LNFQIEAKTFAAM--VANAPKIKTIS 190 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ +E + +LR+ G L + PEI A +HPE H Sbjct: 191 AERIREELMKVFRPPHAARGLDLLRESGLLEQVLPEIAATITCEQTPDYHPEGSVYNHVR 250 Query: 234 MTLS-MAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRH-HGHGPAGVKLVEQLCQRL 288 + LS + SP++ +A L HD+ K +T PE H +GH G ++ E L QRL Sbjct: 251 LMLSQLPEDASPELP--WAVLLHDVAKPVTASRDPETGSIHFYGHEKVGAEMAEVLLQRL 308 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLF 323 + P + D +H P + T+ ++ Sbjct: 309 KFPRKETDEIVAAVLYHMQFKDVPNMRKSTLRRMI 343 >UniRef50_A8MJB7 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJB7_ALKOO Length = 450 Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 104/375 (27%), Positives = 172/375 (45%), Gaps = 62/375 (16%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLD--AGYQQVGRDFPVFLHPQT------H 55 Y+VGG VRD++L +D D + TP++M++ +G++ + P L T H Sbjct: 30 YIVGGCVRDSILNKSPQDWD-ICTNCTPEKMMELLSGFKVI----PTGLKHGTVTVVIDH 84 Query: 56 EEYALARTERKSGSGYTG-------FTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIID 108 Y + T R G G FT +L +DLKRRD TINA+A +ID Sbjct: 85 VGYEVT-TYRVDGDYRDGRHPEKVQFTA------SLREDLKRRDFTINAMAYHHKDGLID 137 Query: 109 PYNGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 + G+ DL NR ++ V F ED LR+LR RF+A+ L + + + T +R ++H Sbjct: 138 YHGGMEDLWNRKIKTVGNPLERFSEDYLRMLRAVRFSAQ---LDYTLEERTFQGIRALSH 194 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 + ++ ER+ +E L T P +L D L+ + PE++ G + H + Sbjct: 195 --NIGKISTERIREELNKILMTEVPSRGLVLLHDTDLLKYILPELEVCVGFNQHSPHHDK 252 Query: 226 IDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWP----------RHHGHGP 275 D H LS+ + +R A L HD+GK PE + RHH Sbjct: 253 -DVFNH---ILSVVDQTEKDLILRLAALLHDIGK----PETFSLDESGIGHFYRHH---V 301 Query: 276 AGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRV 335 A K +++ +RL+ N R + +++A + + + L+ K I +L ++ P + Sbjct: 302 ASWKTAQKIMRRLKYDN--RTIDQVLALVKEHMTRYEKLSDKAIKRLISRVN----PSNM 355 Query: 336 EQLALTSEADVRGRT 350 +L AD+ G + Sbjct: 356 HRLFKLQIADIGGSS 370 >UniRef50_A9KL25 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KL25_CLOPH Length = 459 Score = 103 bits (258), Expect = 8e-21, Method: Compositional matrix adjust. Identities = 101/335 (30%), Positives = 159/335 (47%), Gaps = 56/335 (16%) Query: 4 YLVGGAVRDALLG-LPVKDRDW-VVVGSTPQEM-------LDAGYQQ------VGRD-FP 47 Y VGG VRD+LLG +P DW + + P E+ +D G + +G++ F Sbjct: 24 YAVGGCVRDSLLGRIP---GDWDITTSANPCEVKQIFSRTIDTGIKHGTVTVMLGKEGFE 80 Query: 48 VFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEII 107 V + + EY R ++ YT L +DLKRRD TINA+A + ++ Sbjct: 81 VTTY-RLDGEYEDNRHPKQVE--YTK---------NLIEDLKRRDFTINAMAYNAKDGLV 128 Query: 108 DPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 D + GL DLQ++ +R V A F ED LR+LR RF+A+ L F I DETLA +R Sbjct: 129 DEFEGLKDLQDKKIRCVGSADQRFDEDALRILRAVRFSAQ---LNFTIEDETLAAIR--L 183 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHP 224 A L++++ ER+ +E L + +P+ + + G V+ PE D + + Sbjct: 184 KALNLKNISAERIREELNKLLLSSHPKKIM-IAYETGLTEVILPEFDQMLATKLQGPYQQ 242 Query: 225 EIDTGIHTLMTLS-MAAMLSPQVDVR-------FATLCHDLGKGL---TPPELWPRHHGH 273 G HTL L LS V+ + +A L HD+ K + P++ + H Sbjct: 243 S-SVGEHTLEALRYFTKNLSKDVEDKKQQLIYCWAILLHDVAKPVIKDNNPQVLNQE--H 299 Query: 274 GPAGVKLVEQLCQRLRVPNE-IRDLARLVAEFHDL 307 G + + + +RL+ NE I + +LV +H+ Sbjct: 300 QTKGANIAKSILRRLKFDNETIESVTKLVY-YHNF 333 >UniRef50_B0K130 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=10 Tax=Thermoanaerobacterales RepID=B0K130_THEPX Length = 467 Score = 103 bits (258), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 87/341 (25%), Positives = 153/341 (44%), Gaps = 58/341 (17%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 +Y+VGG +RD +L KD D+ VV +++ +++G F F+ + + Sbjct: 18 LYIVGGYIRDRILNREAKDYDF-VVQEDAEKIAKLVAEKLGGTFVPFMAEKGTYRVVV-- 74 Query: 63 TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD--DNGE---IIDPYNGLGDLQ 117 G FT D+ + DL RD T+NA+A D E IIDP+ G+ D++ Sbjct: 75 -----GDEILDFTNLRGEDIYI--DLAHRDFTMNAMAIKLTDYFEFEYIIDPFGGMTDIK 127 Query: 118 NRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 NR ++HV F EDPLR LR RFA Y F I + T A +RE A ++ + PER Sbjct: 128 NRKIKHVGMMTFKEDPLRALRAVRFAVTYK---FDIDESTKAKIRE--EAELIKQVAPER 182 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + E L +N + +++ D + +F E+ + V ++ + IH+L T+ Sbjct: 183 IMNEIFIILKEKNSHKYLRMMEDLKLMENIFEEVAKMKEVGKC--YYHLTNAWIHSLKTV 240 Query: 237 --------------SMAAMLSPQVD------------VRFATLCHDLGKGLTPPELW--- 267 + ++S +D ++ L HD+GK P ++ Sbjct: 241 EEYENIINSMRFPKDVYDIVSEYLDRKLSSDNKVKDIIKLGALFHDIGK---PESIYIDT 297 Query: 268 ---PRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFH 305 + H G ++V+++ R+++P + L + + +H Sbjct: 298 ENRVHFYNHETKGAEIVKKIASRMKMPKKESSLLKKLVLYH 338 >UniRef50_C8PQT7 tRNA adenylyltransferase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQT7_9SPIO Length = 456 Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 104/365 (28%), Positives = 157/365 (43%), Gaps = 38/365 (10%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPV--------FLHPQTH 55 YLVGGAVRD L D D + + PQE++ + R P ++ H Sbjct: 26 YLVGGAVRDFFLKKAASDWD-IATDAQPQEVM----RLFRRTIPTGIEHGTVTIIYKSKH 80 Query: 56 EEYALARTERKSGSG-YTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGL 113 E RTE G + Y A T+E+DL RRD T+NA+A +G I DP+NG Sbjct: 81 IECTTFRTEADYTDGRHPAAVSYTA---TIEEDLSRRDFTMNAIAVSLPDGIIADPFNGC 137 Query: 114 GDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 D++ +R V F ED LR +R RFAA+ LGF I +TL + + H + Sbjct: 138 ADIRAGRIRTVGNPLDRFLEDGLRPVRAVRFAAQ---LGFAIDGKTLEAIPQALHI--TQ 192 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGI 230 ++ ER +E L P +++ G L + PE+ GV + H D Sbjct: 193 KISIERFREEFTKMLACPAPLTGLRLMESTGLLNLFIPELAECRGVEQGSFHH--FDVLD 250 Query: 231 HTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHG---HGPAGVKLVEQLCQR 287 H+ + + + +R A L HD+GK T + + H K+ + +R Sbjct: 251 HSFLVCNACPAGMEHIHIRLAGLFHDIGKPATRKQAADGSYTFYRHEAVSEKITRSIMRR 310 Query: 288 LRVPN-EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 L+ N EI A LVA+ + H P + + + + ++ L +ADV Sbjct: 311 LKYSNAEIEKTAHLVAQ--HMFHYDPSWTDAAVRRFIVRVG----KENIDDLFALRKADV 364 Query: 347 RGRTG 351 G TG Sbjct: 365 FGLTG 369 >UniRef50_C8PE32 PolyA polymerase family protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PE32_9PROT Length = 366 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 74/185 (40%), Positives = 100/185 (54%), Gaps = 17/185 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTP----QEMLDAGYQQVGRDFPVFLHPQTHEE 57 +IYLVGG VRD LG D D + P Q M D G Q VG+ + F++ + Sbjct: 22 RIYLVGGCVRDHFLGRASADVDVELYDVGPHRFEQIMQDFGAQGVGKSY--FVYKYKSFD 79 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDL 116 +L RTE K+G G+ GF+ A D + +RRD TINA+ + +G+++D Y GL DL Sbjct: 80 ISLPRTESKTGIGHKGFSVALATDE--REASRRRDFTINAMMINAISGKVLDFYGGLADL 137 Query: 117 QNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 R+LR V P F ED LRV R +FAAR+ R TL LMR + ++ L+ E Sbjct: 138 HARILRVVDPRTFVEDSLRVYRAVQFAARFE---LRTEHHTLELMRSI----DVSDLSCE 190 Query: 176 RVWKE 180 RV E Sbjct: 191 RVKAE 195 >UniRef50_UPI0001BC63FF Poly(A) polymerase n=3 Tax=Fusobacterium RepID=UPI0001BC63FF Length = 446 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 104/408 (25%), Positives = 180/408 (44%), Gaps = 40/408 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGS--TPQEMLDAGY-QQVGRDFPVFLHPQTHEEYAL 60 YLVGG+VRD LLG V D D+ S T +++ + + G+ F V EE+ + Sbjct: 26 YLVGGSVRDILLGREVHDFDFCTNLSYETLKQIFSKYFCIETGKAFGVLRLRIDGEEFEI 85 Query: 61 A--RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 A R+E+ S + +E+DL RRD +INA+A + ++D Y+ DL+N Sbjct: 86 ASFRSEKGSDGRRPEEVIFVK---RIEEDLARRDFSINAMAYNQEKGLLDYYDAQKDLEN 142 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +++R + ED LR++R RF ++ LGF + T + M G L + Sbjct: 143 KVIRFIGNPRERIQEDGLRIMRAFRFMSQ---LGFSLESNTKKAI--MEEKGMLGKIAKS 197 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ +E + + ++ G L ++ P + +L+ +H D H T Sbjct: 198 RITEEWNKLILGDFVVETLEEMKKTGVLELILPSLKSLYHFNQNNPYHS-YDLWEH---T 253 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTP----PELWPRHHGHGPAGVKLVEQLCQ-RLRV 290 + + + +D+R A + HD+GK LT + +GH G + + + Q L Sbjct: 254 MQVVKSVPKDLDLRLAAIFHDIGKPLTKTIDEKTGYYHFYGHEKKGAERIRSILQEELEE 313 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 N+ R + E H ++H + K I KL +R E+L S AD G+ Sbjct: 314 SNKTRKEVEFLIENHMILHRNS--SEKGIKKLISHFGI----ERTEKLIKLSIADNLGKN 367 Query: 351 GFESADYPQGRWLREAWEVAQSVPTK--------AVVEAGFKGVEIRE 390 + + + E Q +PT A+++ G++G EI++ Sbjct: 368 LQQLRENNVADLFYKIVE-KQKIPTLQELAIDGFALMKLGYQGKEIQK 414 >UniRef50_A6DBJ0 Putative RNA nucleotidyltransferase n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DBJ0_9PROT Length = 352 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 17/193 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQE----MLDAGYQQVGRDFPVFLHPQTHEE 57 ++YLVGG VRD LG+ + D V +PQ+ M G + VG+ F F++ + + Sbjct: 21 RVYLVGGCVRDEFLGITPNEFDLEVYDISPQKFDKLMKKLGAKGVGKSF--FVYKWKNFD 78 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 AL R E K G+ GF D L KRRD T+NAL ++ EI+D + G+ D+ Sbjct: 79 IALPRKETKIAKGHRGFEVEIIQDEKLAS--KRRDFTMNALMENIYTNEILDFWGGMKDI 136 Query: 117 QNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +N+++RH+ F ED LRVLR +FA+R L F+I +T+ E +L L+ + Sbjct: 137 KNKIIRHIDDKTFIEDSLRVLRAMQFASR---LHFKIHKKTI----EHCKKIDLNDLSKD 189 Query: 176 RVWKETESALTTR 188 R++ E E ++ Sbjct: 190 RIYMEFEKMFKSK 202 >UniRef50_B8I4X8 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=25 Tax=Clostridiales RepID=B8I4X8_CLOCE Length = 448 Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 93/340 (27%), Positives = 155/340 (45%), Gaps = 36/340 (10%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTP---QEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 YLVGG VRD++L D D + + P + + D Y + V + E L Sbjct: 28 YLVGGCVRDSILCKAPYDWD-ITTNALPIDIKSIFDRTYDTGIKHGTVTV---LIGEMCL 83 Query: 61 ARTERKSGSGYTGFTCYAAPD-----VTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 T + Y F PD +L +DL RRD TINA+A ++D + GL D Sbjct: 84 EVTTYRIDGDYKDFR---RPDKVEFTSSLREDLARRDFTINAMAYHPEQGLVDFFGGLQD 140 Query: 116 LQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L+ R+++ V F ED LR++R RF+A+ LGF I + T ++ +++ + ++ Sbjct: 141 LKKRIIKAVGDPEQRFREDALRMMRAIRFSAQ---LGFEIEEATFEAIK--SNSALIANI 195 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER+ E L + NP+ F L G L + PE + + +H ++ Sbjct: 196 SSERIRDELNKTLVSENPE-HFNYLHQTGILPYILPEFERCYKTEQINPYH------VYN 248 Query: 233 LMTLSMAAMLSPQVD--VRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLCQR 287 + +M A+ S + D +R+ L HD+GK T + +GH ++ E++ R Sbjct: 249 VADHTMYAVKSIENDHILRWTVLLHDVGKPPRKTTDSKGIDHFYGHQAVSSQIAEKVLNR 308 Query: 288 LRVPNEIRDLARLVAEFHDL-IHTFPMLNPKTIVKLFDSI 326 LR E L+ ++HD+ I P K + K+ D + Sbjct: 309 LRFDKESIKKIVLLVKYHDMDIEDTPKSIRKAVNKIGDEL 348 >UniRef50_B5ELD4 Polynucleotide adenylyltransferase region n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELD4_ACIF5 Length = 456 Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 97/274 (35%), Positives = 131/274 (47%), Gaps = 32/274 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA----GYQQVGRDFPVFLHPQTHEE 57 +I +VGG RDALLG+ D D + G + + + G +VG V++ E Sbjct: 22 EILVVGGTPRDALLGMAAHDWDLEIHGLSEARLGECLMPFGAHRVGGRCAVWV--VAGAE 79 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 AL + + P + E +RRD ++NAL D ++D + G+ DL Sbjct: 80 IALPQAQ----------GGRIDPHLPWEIAAQRRDFSVNALIWDWRTQRLLDHFGGVDDL 129 Query: 117 QNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 R LR VS +FGEDPLRV R AR A + LGF I T AL R++ A L+H+ E Sbjct: 130 HARRLRMVSADSFGEDPLRVFRAARLAGQ---LGFSIEARTAALCRQL--APRLQHVPEE 184 Query: 176 RVWKETESALTTRNPQVF--FQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 R+ KE E AL R + + L GA+ FPE+ AL VP HPE D IHT Sbjct: 185 RLRKEWE-ALLLRGQHLIRAWDSLALTGAV-TRFPELHALQAVPQRPDAHPEGDVWIHTG 242 Query: 234 MTLSMAAML-----SPQVDVRFATLCHDLGKGLT 262 L+ A L S + + L HDLGK T Sbjct: 243 RVLAAAGQLRSGDRSRDIILMLGALLHDLGKAGT 276 >UniRef50_B4U5T6 Polynucleotide adenylyltransferase region n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5T6_HYDS0 Length = 821 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 70/215 (32%), Positives = 112/215 (52%), Gaps = 14/215 (6%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFL-HPQTHEEYAL 60 K+YLVGG VRD +L P D D+V G ++L+ + G FL H +Y Sbjct: 457 KLYLVGGVVRDIILNRPSYDIDFVFEGDI--DLLEQSLKSHGIKTHRFLGFNSVHFKYKG 514 Query: 61 ARTERKSGSGYTGFTCYAAPDV---TLEDDLKRRDLTIN----ALAQDDNGEIIDPYNGL 113 + E S A P V +L++DL RRD TIN +L ++D G +ID + L Sbjct: 515 FKIEISSTRREYYEMAGAYPVVSKASLKEDLFRRDFTINTLLLSLDEEDFGTVIDYFGAL 574 Query: 114 GDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 D++N+++R + P +F EDP+R+LR RF A+ L F+++ +T L+ E G L++ Sbjct: 575 NDIKNKIIRVLHPLSFIEDPVRILRAIRFEAK---LNFKLSKDTKRLLEETLQKGMLKYA 631 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLF 207 R++ E + AL + + F+ + G + LF Sbjct: 632 PKGRIFNELKIALQEKEFENIFETYKKYGIIESLF 666 >UniRef50_C9LM50 PolyA polymerase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LM50_9FIRM Length = 500 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 112/413 (27%), Positives = 183/413 (44%), Gaps = 57/413 (13%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA----GYQQV---GRDFPVFLHPQTHE 56 Y VGG VRD LL D D + + P+E++ G++ V GR F + H Sbjct: 47 YAVGGCVRDLLLAKAPHDWD-ITTSAKPEEIISVMGRNGWKTVDGAGRRFGTVIVVINHI 105 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVT----LEDDLKRRDLTINALAQDDNGEIIDPYNG 112 Y + + + G + ++T L++DL RRD T+NALA +G + D ++G Sbjct: 106 AYEVTTFRNE----FYGQDSHRPENITFSSTLKEDLSRRDFTVNALALGRDGVVYDYFDG 161 Query: 113 LGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE- 168 DL+N+ LR V A F ED LR+ R RF L F +AD++ L+R M A + Sbjct: 162 TKDLENKKLRTVGKAEERFREDALRLFRACRF---IGQLDF-MADKS--LVRGMASAFDR 215 Query: 169 LEHLTPERVWKETESALTT----RNPQVFFQV-LRDCG----------ALRVLFPEIDAL 213 + L+ ERV +E E L + R + + L +C A+R+L PE+ L Sbjct: 216 VSGLSLERVREEVEKLLVSPFAARGLDLLVRTGLNECSCRIRENGRTEAVRIL-PELSHL 274 Query: 214 FGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGL----TPPELWPR 269 +P K+H + D HTL ++ A P + +R+A L HD+GKG+ + Sbjct: 275 VDLPQQKKFH-KFDGWYHTLAVVNAA---PPTLLLRWAALLHDVGKGMPGVRRIKDGKYT 330 Query: 270 HHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAW 329 +GH G ++ ++ +R R P + E H H F + + K + Sbjct: 331 DYGHDLKGAEMAAEIFRRWRFPAAFAKRVVWLVENHMRYHYFANVPEANVEKWLRQLARG 390 Query: 330 RK-------PQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPT 375 ++ + + +L AD+ G E+A + + E+ Q +P Sbjct: 391 KQFSSSADMKEGIGELTALCNADIIGCGKDENATEGHSSFGKYMEELCQMMPV 443 >UniRef50_C7M1E9 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1E9_ACIFD Length = 462 Score = 102 bits (253), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 108/334 (32%), Positives = 156/334 (46%), Gaps = 47/334 (14%) Query: 3 IYLVGGAVRDALLGL-PVKDRDWVVVGSTPQEMLD------AGYQQVGRDF--------P 47 +YLVGG VRDALLG+ P D D +TP+E+++ + G F Sbjct: 27 LYLVGGVVRDALLGIEPNGDVD-ATTDATPEEIVEIVRPVATHFNLTGLRFGTVAFHYHG 85 Query: 48 VFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA---QDDNG 104 V L TH A + RK + L +DL RRD T+NA+A D+ Sbjct: 86 VPLEVTTHRGEAYDSSTRKPTVHFVS---------ALAEDLLRRDFTVNAMAVEVTSDDP 136 Query: 105 EIIDPYNGLGDLQNRLLRH-VSP--AFGEDPLRVLRVARFAARYAHLGFRIADETLALMR 161 +IDP+ G+ DL R LR + P +F +DPLR+LR ARF AR L + + Sbjct: 137 TLIDPFGGMEDLLARRLRTPMDPRRSFSDDPLRMLRCARFIAR---LDLEPQRALVDAVH 193 Query: 162 EMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAK 221 E+ A LE ++ ER+ E L +P L D PE+ AL P Sbjct: 194 EL--APRLEVVSRERIRDELSRLLVVPDPSKGLWFLVDTPLAAEFLPELPALRLEQDPIH 251 Query: 222 WHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPR---HHGHGPAGV 278 H ++ T+++ A SP++ +R A L HD+GK T E+ P H H G Sbjct: 252 HHKDV-----LAHTIAVTASCSPRLRLRLAALLHDIGKPAT-REIGPNGVSFHFHDVVGA 305 Query: 279 KLVEQLCQRLRVPNE-IRDLARLVAEFHDLIHTF 311 ++ ++ + LR PN+ + D+ARLV E H HT+ Sbjct: 306 RMARRILRELRYPNDLVDDVARLV-ELHLRFHTY 338 >UniRef50_C7MMX1 Uncharacterized domain HDIG-containing protein n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMX1_CRYCD Length = 451 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 97/323 (30%), Positives = 144/323 (44%), Gaps = 32/323 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEML----DAGYQQV----GRDFPVFLHP 52 ++ +LVGG VRD L+G P+ D D + ++ QE + AG V + Sbjct: 22 VEAWLVGGCVRDGLIGRPIHDID-IASSASWQETVRLCQAAGMTTVETGTQHGTVTIIAD 80 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 T E R E + G Y P ++++DL RRD TINA+A + + + DPY G Sbjct: 81 GTPFEVTTFRGEGQYQDGR--HPEYVFPVDSIDEDLARRDFTINAMAWNPSRGLHDPYGG 138 Query: 113 LGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 D +++R V A F ED LR+LR ARFA++ LGF + ET M E H L Sbjct: 139 QADAAAKIIRAVGKAQQRFDEDALRILRGARFASQ---LGFTLETETAHAMNEAAH--NL 193 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCG-ALRVLFPEIDALFGVPAPAKWHPEIDT 228 ++ ER+ E ++ L L +C + PE+ G +K+H D Sbjct: 194 ARISAERIAAEMDALL---KGSFVHDALMNCAPVICAAIPELSCTCGFDQQSKYH-SFDV 249 Query: 229 GIHTLMTLSMAAMLSPQVD-VRFATLCHDLGK--GLTPPELWPRHH-GHGPAGVKLVEQL 284 H L+ A +P+ VR+ HD+GK + E H H G + L Sbjct: 250 YEH----LAWATQQTPKKSLVRWCAFLHDIGKPATMVVDEAGAGHFPDHAAVGEAMARNL 305 Query: 285 CQRLRVPNEIRDLARLVAEFHDL 307 +RLR P A L+ +HD+ Sbjct: 306 LKRLRFPTRFIHDACLLIRYHDI 328 >UniRef50_A2VMT0 Poly(A) polymerase pcnA n=5 Tax=Corynebacterineae RepID=A2VMT0_MYCTU Length = 514 Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 100/324 (30%), Positives = 151/324 (46%), Gaps = 37/324 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 ++YLVGG+VRDALLG D D+ + P+ + Q++ R + + E + Sbjct: 38 ELYLVGGSVRDALLGRLSPDLDFTT-DARPERV-----QEIVRPWADAVWDTGIEFGTVG 91 Query: 62 RTERKSGSGYTGFTCYAAPDVT----------LEDDLKRRDLTINALA----QDDNGEII 107 + T F + V+ LE DL RRD T NA+A GE + Sbjct: 92 VGKSDHRMEITTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVTATGPGEFL 151 Query: 108 DPYNGLGDLQNRLL---RHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 DP GL L+ ++L S +FG+DPLR+LR ARF ++ LGF +A A + EM Sbjct: 152 DPLGGLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQ---LGFAVAPRVRAAIEEM- 207 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHP 224 A +L ++ ERV E + L +P ++ G V+ PEI + A + H Sbjct: 208 -APQLARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMR--MAIDEHHQ 264 Query: 225 EIDTGIHTLMTLSMAAML---SPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGV 278 D H+L L A L P + +R+A L HD+GK T P+ H H G Sbjct: 265 HKDVYQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGA 324 Query: 279 KLVEQLCQRLRVPNE-IRDLARLV 301 K+V + + L+ + I D+++LV Sbjct: 325 KMVRKRMRALKYSKQMIDDISQLV 348 >UniRef50_A1HMM1 Polynucleotide adenylyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMM1_9FIRM Length = 302 Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 85/246 (34%), Positives = 117/246 (47%), Gaps = 34/246 (13%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ-------VGRDFPVFLH--PQT 54 Y+ GGAVRD + G PV D D + + P+ + + +Q +G ++ V + T Sbjct: 24 YIAGGAVRDLVAGRPVNDYD-IATSARPEAVREIAARQGWQVVDKLGTNYGVVMVVVDGT 82 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 E A R ER + + A +T DDL RRD T+NA+A D G IIDP+ G Sbjct: 83 GVEVATFRGERYGEDSHRPAEVWYADTIT--DDLSRRDFTVNAMAMDVAGNIIDPFGGRR 140 Query: 115 DLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL RL+R V FGED LR+LR RFA A LGF I D TLA + + G + Sbjct: 141 DLAARLIRTVGDPNRRFGEDALRMLRACRFA---AQLGFAIDDVTLAAIP--ANLGRMAG 195 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCG----ALRV----------LFPEIDALFGVP 217 L+ ERV E + L P + L G + RV + PE++ L G+P Sbjct: 196 LSLERVRLELDKLLLGDYPHLGLAALVATGLAGASCRVKEKGEYQAVAILPELNHLVGLP 255 Query: 218 APAKWH 223 +H Sbjct: 256 QNPAYH 261 >UniRef50_B1GZF8 CCA-adding tRNA nucleotidyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZF8_UNCTG Length = 461 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 90/317 (28%), Positives = 144/317 (45%), Gaps = 39/317 (12%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVG-STPQEMLDAGY-------QQVGRDFPVF----- 49 +Y+VGG VRD + KD D +V G + M AG ++ D PV Sbjct: 28 VYIVGGFVRDLFIKREPKDLDIMVCGRGSNLSMQSAGINFSKILAKKYKLDKPVIFERFG 87 Query: 50 ---LHPQTHE-EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINAL-AQDDNG 104 L + E E+ + R E + + T A ++E D RRD TINAL + ++ Sbjct: 88 TSKLFMDSEEVEFVMPRREYYNANSRNPDTQIA----SVEQDALRRDFTINALFLRLNDM 143 Query: 105 EIID-PYNGLGDLQNRLLRHVSPA-----FGEDPLRVLRVARFAARYAHLGFRIADETLA 158 +I+D G+ D++N+++R P+ F +DPLR+LR R + L F+I ET Sbjct: 144 KILDFTSQGVVDIKNKIIRVTDPSNIEIIFKQDPLRILRAVR---QSVQLDFKIETETYN 200 Query: 159 LMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA 218 M+ + +E ++PER+ E L + P F+++ + + PE+ L + Sbjct: 201 AMK--ISSPSIEIVSPERIRDEINKILIEKIPSKAFKIMDEINLSVKILPEVARLKNLEQ 258 Query: 219 PAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPR--HHGHGPA 276 K+H + D +HTL L + +R A L HD GK T + R +GH Sbjct: 259 LEKYHTD-DVFVHTLKVLDRT---KNDIILRMAALLHDTGKYATCKKNGGRICFYGHDAE 314 Query: 277 GVKLVEQLCQRLRVPNE 293 K E + +RL+ E Sbjct: 315 SAKEAEAVLKRLKYSKE 331 >UniRef50_B8FBG8 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FBG8_DESAA Length = 472 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 99/367 (26%), Positives = 155/367 (42%), Gaps = 78/367 (21%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYA--L 60 +YLVGG+VRD +LG P+KD D +E+ +++ + P + A Sbjct: 19 LYLVGGSVRDFVLGRPMKDIDLAC--PNAREL----AKKLAKANNAAFVPMEKDPAAPCF 72 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA--------QDDNGEIIDPYNG 112 R + + + PD+ DL RD TINA+A QD G I+DP+NG Sbjct: 73 RVVNRSDPTDFLDVVRFRGPDI--HTDLADRDFTINAMALDLENGFPQDPMGAILDPFNG 130 Query: 113 LGDLQNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 L D++ +++R + +DPLR+LR RFA++ LGF I ++TLA RE+ A +LE Sbjct: 131 LDDIRKQIIRSLGRKNLKDDPLRILRAFRFASQ---LGFEIEEKTLADCREL--APQLER 185 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEI--------------------- 210 ER+ E +A N + + G L +FP+I Sbjct: 186 TAAERITHELITAFEAENSYSVVRKMWKAGVLLPIFPDIAPMEACQQDGFHHHNVWEHSL 245 Query: 211 -------------DALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDL 257 DALFG ++ P++ + T+ M ++ + L HD+ Sbjct: 246 DVYEALEGVLGGLDALFG-----EYAPQVRECLEAGRTVPM---------LKLSALLHDI 291 Query: 258 GKGLT----PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF-- 311 GK T + GH G L + RLR+ N+ D L+ H + Sbjct: 292 GKPYTGRYDEAKGRTTFFGHAKKGEALARKALGRLRLTNKDMDFVCLLVSEHRHVEQLAQ 351 Query: 312 PMLNPKT 318 P++ KT Sbjct: 352 PVVKHKT 358 >UniRef50_C1IAF4 PolyA polymerase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAF4_9CLOT Length = 448 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 87/316 (27%), Positives = 145/316 (45%), Gaps = 30/316 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFP-----VFLHPQTHEEY 58 ++VGG VRD++L KD D + + P++ L + + V ++ ++E Sbjct: 24 FMVGGCVRDSILNNSPKDYD-ITTSAKPEDTLSLFEKTIPTGIKHGTVTVLINNNSYE-V 81 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 RTE + D+ DDL RRD TINALA + + ++D +NG+ D++N Sbjct: 82 TTYRTEGNYLDNRRPSSVNFVSDI--RDDLSRRDFTINALAYNKSAGLVDYFNGISDIKN 139 Query: 119 RLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 ++R V A F ED LR+LR RF+ + L F I +ET + + + + +++ E Sbjct: 140 SIIRCVGDADKRFKEDALRMLRAVRFSCQ---LNFDIEEETYNAI--LNNNKLISNISFE 194 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E L + NP +L+D G L + PEI+ L H + HTL Sbjct: 195 RIRDELCKILISDNPSKGLILLKDTGLLGAILPEINNLVNFTPKCNNHNN-NVFKHTLNV 253 Query: 236 LSMAAMLSPQVDVRFATLCHDLGK--GLTPPE----LWPRHHGHGPAGVKLVEQLCQRLR 289 + + +R + L HD+GK LT E +P H+ G + ++ +LR Sbjct: 254 IDNT---HNNLLLRLSALLHDVGKLNTLTHNENGFYYFPNHNIEGSL---MTRKILSKLR 307 Query: 290 VPNEIRDLARLVAEFH 305 N ++ + E H Sbjct: 308 FDNNTINIVCKLIEHH 323 >UniRef50_A6W2I1 Poly(A) polymerase n=6 Tax=Oceanospirillales RepID=A6W2I1_MARMS Length = 484 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 78/237 (32%), Positives = 117/237 (49%), Gaps = 32/237 (13%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPV------------- 48 +LVGG VRD L+G+ KD D VV +TP+E+ + + + +GR F + Sbjct: 59 FLVGGCVRDHLIGIKPKDFD-VVTNATPEEVHTIFSNSRLIGRRFKLVHVTFGREIIEVS 117 Query: 49 -FLHPQTHEEYALARTERKSGSGYT------GFTCYAAPDVTLEDDLKRRDLTINALAQD 101 F ++ T+ S G G +E+D +RRD T NAL + Sbjct: 118 TFRANSAQDDSDDDDTQNSSLKGKDSARSAHGIVLRDNVYGNIEEDAERRDFTFNALYYN 177 Query: 102 -DNGEIIDPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETL 157 + I D GL D++N+ +R + A + EDP+R+LR RFA + LGF + ET Sbjct: 178 VKDFSIHDYCGGLKDIENKQIRIIGDARQRYQEDPVRMLRAIRFAGK---LGFELEAETA 234 Query: 158 ALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALF 214 A ++EM H L+H+ P R+++E L + N F +LR G R LFP+ DAL Sbjct: 235 APIKEMAHL--LDHIPPARLFEEVLKLLGSGNGIETFHLLRQYGLFRYLFPDTDALL 289 >UniRef50_B9KCP2 tRNA nucleotidyltransferase/formyltetrahydrofolate deformylase n=117 Tax=Bacteria RepID=B9KCP2_CAMLR Length = 644 Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 70/190 (36%), Positives = 99/190 (52%), Gaps = 17/190 (8%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQ----EMLDAGYQQVGRDFPVFLHPQTHEEYA 59 YLVGG VR++ L L D D + PQ M G VG+ F V+ + + + A Sbjct: 29 YLVGGCVRNSFLDLSSDDYDIEIYDIEPQIFDDLMQKLGANGVGKSFFVYKYKKF--DLA 86 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQN 118 LAR E K +G+ GF D ++ KRRD TINAL + + + +D +NGL DLQ Sbjct: 87 LARYENKISTGHRGFEVKVCNDE--QEGAKRRDFTINALMVNIFDFKFLDFFNGLQDLQA 144 Query: 119 RLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +++RH+ +F ED LRVLR FA R+ IA E+L LM+ M ++ L+ ER+ Sbjct: 145 KIIRHIDDKSFVEDSLRVLRGISFACRF---DLTIARESLKLMQTM----DISDLSKERI 197 Query: 178 WKETESALTT 187 E T Sbjct: 198 NNELYKIFKT 207 >UniRef50_Q5WGA1 CCA-adding enzyme n=1 Tax=Bacillus clausii KSM-K16 RepID=CCA_BACSK Length = 376 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 101/206 (49%), Gaps = 24/206 (11%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALART 63 Y+VGGAVRD LLG V D D + ++P ++ D F +H + L Sbjct: 22 YIVGGAVRDYLLGKDVDDVD-IATQASPHQVADI--------FTKGVHINQEHKTVLIPG 72 Query: 64 ERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRH 123 E+ G T Y TL +DL++RD TINALA + E+IDPY G DLQ RLLR Sbjct: 73 EK----GPIEITTYKGE--TLAEDLQKRDFTINALAMTETREVIDPYGGRQDLQKRLLRS 126 Query: 124 --VSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT-HAGELEHLTPERVWKE 180 EDPLR+LR ARF + LGF AD L++E T L+ ERV E Sbjct: 127 YDAQKRLSEDPLRMLRAARF---ISSLGFE-ADRQ--LVKETTVQKAALQRCARERVVVE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVL 206 E L + F L++ GA+ L Sbjct: 181 LEKLLKGMETEAAFAFLQETGAIHSL 206 >UniRef50_A5G663 Polynucleotide adenylyltransferase region n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G663_GEOUR Length = 450 Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 84/219 (38%), Positives = 105/219 (47%), Gaps = 17/219 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +K YLVGG VRD LLG +KD D+ + G+ E+ + +G F EE Sbjct: 26 VKAYLVGGGVRDLLLGRRLKDLDFALTGACA-ELPRRFAKSIGGSFFWL-----DEERLQ 79 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG---EIIDPYNGLGDLQ 117 R RK G G F T+E+DL +RD TINALA G +IDP G DLQ Sbjct: 80 GRVVRKGGDGVLTFDFAPQRGETIEEDLSQRDFTINALALPLAGGKYALIDPTGGFSDLQ 139 Query: 118 NRLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 ++R SPA F +DPLR+LR RFA A LGF I DE M A LE + ER Sbjct: 140 KGIIRACSPASFSDDPLRLLRAVRFA---ATLGFAI-DEASRQTITMESA-LLERVAGER 194 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFG 215 V E L + L D G L + P + +FG Sbjct: 195 VRDELFQILAAPGIETSLNALLDSGLLGQIVPLV--MFG 231 >UniRef50_Q30UP5 Polynucleotide adenylyltransferase region n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30UP5_SULDN Length = 411 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 109/208 (52%), Gaps = 14/208 (6%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLD------AGYQQVGRDFPV--FLHPQTHE 56 +VGG +RD+LL L KD D V G + E+L+ VG+ F V + Sbjct: 24 IVGGFIRDSLLFLESKDIDIEVYGVSSFEILEEILEEFGKINIVGKSFGVCKLMFVGYDL 83 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 +++L R + K SG+ GF + + RRD TIN++ D + +++DP+ G+ D Sbjct: 84 DFSLPRMDNKISSGHRGFNVKTYYKLDFKTATSRRDFTINSIGYDVVSKKLLDPFYGIDD 143 Query: 116 LQNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 L+N++LR V+ +F +DPLRVLR A+F AR+ I +EM L L Sbjct: 144 LKNKILRAVNLESFAQDPLRVLRAAQFCARF---NLSIEYNLAITCKEMVSHALLAQLPK 200 Query: 175 ERVWKETES-ALTTRNPQVFFQVLRDCG 201 ERV++E + L ++ P + F +LR+ G Sbjct: 201 ERVFEEFKKLLLKSQKPSIGFTLLREFG 228 >UniRef50_UPI0001C37B0D poly A polymerase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37B0D Length = 439 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 88/316 (27%), Positives = 143/316 (45%), Gaps = 29/316 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQVGRDFP----VFLHPQTHEE 57 Y VGG VRD ++G D D + + P++++ A GY+ + L E Sbjct: 21 YTVGGCVRDTIMGRSAHDTD-ITTNALPEQVIAAFDGYKVIPTGLKHGTVTILKNSVPYE 79 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 R + + T +T +DL RRD T+NA+A D +G I DP+ G D++ Sbjct: 80 ITTYRIDGEYKDSRRPETVEFTASIT--EDLARRDFTMNAIAMDRHGNIADPFGGKEDIE 137 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 N ++R V F ED LR++R RFAA+ LGF I ++T + M L++++ Sbjct: 138 NGIIRCVGDPVQRFTEDALRIMRAVRFAAQ---LGFSIEEKTAEAVHSMKE--RLKNISM 192 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E + L R +L + + PE + G + +H D HT+ Sbjct: 193 ERIRSELDKILCGR--YCVEVLLEYSDIITTIIPEFEPSIGFDQHSPYH-RYDVWEHTVR 249 Query: 235 TLSMAAMLSPQ--VDVRFATLCHDLGK-GLTPPELWPRHH--GHGPAGVKLVEQLCQRLR 289 + A PQ V +R A L HD+ K + R H HGP G ++ +++ +R++ Sbjct: 250 AVGFA----PQDNVKMRTALLFHDIAKPACATFDANCRGHFKKHGPVGAEMTKEIMKRMK 305 Query: 290 VPNEIRDLARLVAEFH 305 E A ++ H Sbjct: 306 YDGETMTYAVMLIARH 321 >UniRef50_B8FPL4 Polynucleotide adenylyltransferase region n=3 Tax=Bacteria RepID=B8FPL4_DESHD Length = 873 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 85/248 (34%), Positives = 116/248 (46%), Gaps = 39/248 (15%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQ--------- 53 +++VGG VRD LL +P +D D+V+ G Q +D V H Q Sbjct: 474 VFVVGGFVRDILLKVPTQDLDFVIEGDG--HAFARALAQRLQDVQVVFHDQFGTARLDFA 531 Query: 54 --THEEYALARTERKSGSGYTGFTCYAAPDVT---LEDDLKRRDLTINALAQDDN----G 104 +H + A +R E S G A P V L DD+ RRD TINA+A N G Sbjct: 532 DGSHLDVASSRREDYSSPG-------ALPQVEESRLRDDMFRRDFTINAMAIAVNSVRYG 584 Query: 105 EIIDPYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREM 163 E++D Y GL DL+ +R + + +F EDP R+LR RFA RY GFR+A ET + Sbjct: 585 ELVDYYGGLRDLKQGEIRFLHNLSFIEDPTRILRALRFAGRY---GFRLAKETREGLYTA 641 Query: 164 THAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKW- 222 AG L+ L+ ER +E L+ V + L D G R FG P + Sbjct: 642 LDAGVLQKLSIERFTEEFMHMLSELKFGVMGESLLDMGVFR-------KWFGAELPWDFT 694 Query: 223 HPEIDTGI 230 HP ++ I Sbjct: 695 HPGLNQAI 702 >UniRef50_B1CAN8 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAN8_9FIRM Length = 439 Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 86/321 (26%), Positives = 142/321 (44%), Gaps = 42/321 (13%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLD--AGYQQV--GRDF---PVFLHPQTHE 56 Y+VGG VRD LLG KD D + ++P+E ++ Y+ + G + V ++ E Sbjct: 24 YIVGGCVRDLLLGKTPKDYD-ITTNASPKETMELFKEYKTIPTGIKYGTVTVIINNTPIE 82 Query: 57 EYALARTERKSGSGYTGFTCYAAPDV-----TLEDDLKRRDLTINALAQDDNGEIIDPYN 111 T RK G + P+ ++E+DL RRD TINA+A ++ +ID + Sbjct: 83 ----VTTFRKEGK----YIKNRKPESVEFLSSIEEDLSRRDFTINAMAYNEKSGLIDLFE 134 Query: 112 GLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G DL+ ++R V F ED +R+LR RF RY F I + TL ++E H Sbjct: 135 GRQDLEKGIIRVVGDGKERFKEDAIRILRAYRFMGRY---DFEIENNTLNAIKENMHL-- 189 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 L ++ ER+ E + + + + VLFP I F K+H + + Sbjct: 190 LNNVAKERILPEIKEIFESD------MDINKMDFITVLFPIIKECFHTYQNNKYHMQ-NV 242 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLC 285 G HT T + + ++ L HD+GK T E + H ++ + + Sbjct: 243 GEHTYKTFN---NIENVFHLKMTMLLHDIGKVKTKTTDAENTDHFYNHSDISREMAKNIL 299 Query: 286 QRLRVPNEIRDLARLVAEFHD 306 + N+ ++ L+ + HD Sbjct: 300 DDFKFDNDTKEKILLLIKNHD 320 >UniRef50_A8Z5W3 tRNA nucleotidyltransferase n=2 Tax=Candidatus Sulcia muelleri RepID=A8Z5W3_SULMW Length = 445 Score = 98.6 bits (244), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 81/304 (26%), Positives = 140/304 (46%), Gaps = 43/304 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVV-VGSTPQ------EMLDAGYQQVGRDFPVFLHPQT 54 K Y+VGG VRD L+G V + ++V VG + E LD ++ +F + T Sbjct: 25 KSYVVGGYVRDFLIGKNVCKKVYIVTVGDCIKLAKKVCEKLDHKHK-----INIFKYFGT 79 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDPY 110 A+ + + ++ A +L++ K+ D TIN LA N G++IDP+ Sbjct: 80 ----AIIKYNNLNIEFFS-----ANKRCSLKEFKKKIDFTINTLAISLNNLNYGKLIDPF 130 Query: 111 NGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 GL D+ ++ ++ D LR++R RF Y F+I + ++ +M+ Sbjct: 131 GGLFDIMKNKIKSTIDSY--DSLRMIRAIRF---YNEFNFQIDNLSIQIMKI-------- 177 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGI 230 L+ ER+ E L + P L G L ++ PE+ L G+ K+ + D I Sbjct: 178 -LSIERILYEFNKILLSNKPSTGIFYLYKIGLLSIILPELINLKGIENKKKFKHK-DNFI 235 Query: 231 HTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQLCQR 287 HTL + ++ + + + +A L HD+GK +T P H H G K++ + +R Sbjct: 236 HTLEVVDNISIYTNNIWLIWAALLHDIGKSITKKYIPNFGWTFHSHELIGSKMITSIFER 295 Query: 288 LRVP 291 L++P Sbjct: 296 LKLP 299 >UniRef50_D1BP90 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=3 Tax=Veillonella RepID=D1BP90_VEIPT Length = 472 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 110/384 (28%), Positives = 162/384 (42%), Gaps = 53/384 (13%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ-------VGRDFPVFLHPQTHE 56 Y++GGAVRD L+ D D +V + P +++ VG+ F V + + Sbjct: 20 YIIGGAVRDILMHQKPHDFD-IVTSARPDTVIEVLRSHDIQTTDLVGKSFGVVVATLEGK 78 Query: 57 EYALA--RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 +Y +A RTER + A TLE+D+ RRD T+N +A + GE+ID G Sbjct: 79 QYEIATYRTERYGADSHRPEEITYAD--TLEEDVLRRDFTVNGMAMNRYGEVIDLVGGRR 136 Query: 115 DLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 D++++ LR + A F ED LR+ R RF A+ L F + E L M + H + Sbjct: 137 DIKHKTLRTIGNAQERFEEDALRLFRACRFVAK---LDFLPSKELLEAMPKAFH--RVPG 191 Query: 172 LTPERVWKETESAL----TTRNPQVFFQV-LRDCGALRV---------LFPEIDALFGVP 217 L+ ERV E + + V Q L +C V + PE+ L +P Sbjct: 192 LSLERVRSEINRLMLEPAVAKGLDVLVQSRLAECSCRVVENGVAREVPILPELYHLVNLP 251 Query: 218 APAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGL------TPPELWPRHH 271 +H E D HTL +S P + +R+ L HD+ KG+ L R Sbjct: 252 QEKDFH-EFDGWYHTLAVVSHT---EPDLVLRWGALLHDVAKGMPAVRAVINGRLTDR-- 305 Query: 272 GHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPM---LNPKTIVKLFDSIDA 328 GH G ++ E L RL P + + H H F N K ++ Sbjct: 306 GHDTLGAEMTETLLTRLGYPKAFVQRVAWIVKNHMRFHYFVQNGDANEKKWLRKEARSGE 365 Query: 329 WRKPQRV----EQLALTSEADVRG 348 +R Q + EQLA ADV G Sbjct: 366 FRDSQIMRTAWEQLAKVCAADVLG 389 >UniRef50_C6P818 Polynucleotide adenylyltransferase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6P818_CLOTS Length = 379 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 30/214 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +K Y+VGG +RD +L L D D V G + L G+ + HE++ Sbjct: 3 VKSYIVGGYIRDKILNLESNDIDITVEGDGIRYALMLNKILNGK-------IEIHEKFKT 55 Query: 61 ARTE-----------RKSGSGYTGFTCYAAPDVTLED---DLKRRDLTINALAQD-DNGE 105 A+ + RK ++G PDV L D D+KRRD TIN LA D G Sbjct: 56 AKIQADKYTFDVVSARKEYYTHSGI----LPDVELADIVEDIKRRDFTINMLAFDIKEGM 111 Query: 106 IIDPYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 IID NGL D++N+L+R V +F +DP R+ R R++ R L F++ T L+++ Sbjct: 112 IIDLCNGLDDIKNKLIRVVHDKSFNDDPTRIFRALRYSVR---LDFKLEPHTELLLKQSI 168 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLR 198 G+ ++L+ +R+ E L+ +NP+ ++++ Sbjct: 169 ANGDFDNLSTDRIMNEIYLILSEKNPETIVKLMK 202 >UniRef50_C0M731 CCA-adding enzyme n=4 Tax=Streptococcus dysgalactiae group RepID=C0M731_STRE4 Length = 404 Score = 97.8 bits (242), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 103/194 (53%), Gaps = 25/194 (12%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ--QVGRDFPVFLHPQTHEEYALA 61 Y VGG+VRD+LL P+ D D + P+E + VG + L + EY + Sbjct: 29 YFVGGSVRDSLLNRPIHDVD-IAASCYPEETKAIFLRTIDVGIEHGTVLVLENGSEYEIT 87 Query: 62 --RTERKSGSGYTGFTCYAAPDV-----TLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 RTE + Y P +LE+DLKRRD T+NALA D++G++ID +NGL Sbjct: 88 TFRTE-------DVYVDYRRPSQVSFVRSLEEDLKRRDFTVNALALDEDGQVIDIFNGLE 140 Query: 115 DLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL+++LLR V F ED LR++R RFA A L F I ET M+ +HA LE Sbjct: 141 DLKHKLLRAVGRPQERFEEDALRIMRGFRFA---ASLDFDIEAETFEAMK--SHAPLLEK 195 Query: 172 LTPERVWKETESAL 185 ++ ER + E + L Sbjct: 196 ISIERSFIELDKLL 209 >UniRef50_A7I2S1 PolyA polymerase family protein n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I2S1_CAMHC Length = 382 Score = 97.4 bits (241), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 82/237 (34%), Positives = 121/237 (51%), Gaps = 30/237 (12%) Query: 4 YLVGGAVRDALL--GLPV-KDRDWVVVGSTPQE----MLDAGYQQVGRDFPVFLHPQTHE 56 Y VGG+VRD L G+ KD D V P+ ML G + VG+ F F++ + Sbjct: 31 YFVGGSVRDFFLFGGMSKPKDIDIEVYDINPEIFEKIMLGIGAKGVGKSF--FVYKFENF 88 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 + ALAR+E K G G+ F D + +KRRD +INA+ + GEI D Y G+ D Sbjct: 89 DIALARSENKIGVGHKAFEVEVCNDERMA--VKRRDFSINAVMINIFTGEICDFYGGVAD 146 Query: 116 LQNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++ R+LR V F ED LRVLR A+F AR+ +I TL +M+++ +L+ L+ Sbjct: 147 IRARVLRMVCEKTFVEDSLRVLRGAQFCARF---NLKIEQNTLKIMQKI----KLDDLSK 199 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEID-ALFGVPAPAKWHPEIDTGI 230 +R+ E + F++L+ G ID +FGV K + +I TGI Sbjct: 200 DRIRDELVKLFRAKFLAHGFKILQILG--------IDEKIFGVKISDKQNKKI-TGI 247 >UniRef50_C7N8U3 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=3 Tax=Leptotrichia RepID=C7N8U3_LEPBD Length = 588 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 89/385 (23%), Positives = 173/385 (44%), Gaps = 26/385 (6%) Query: 4 YLVGGAVRDALLGLPVKDRDWVV-VGSTPQEMLDAGY--QQVGRDFPVFLHPQTHEEYAL 60 +LVGGAVRD +L D D+ + + + + A Y +++G F + + + Y + Sbjct: 23 FLVGGAVRDKILNKDPGDYDFATDIEYSELKRIFADYNPKEMGAHFGILMIKVNGKSYEI 82 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 A+ +++G + + T+E+DL RRD TIN+LA ++ I+D Y G D++ ++ Sbjct: 83 AKFRKETGVYNSRYPKEIKFVKTIEEDLSRRDFTINSLAYNEETGIVDLYGGKQDIKRKV 142 Query: 121 LRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +R V ED LR+LR RF ++ LGF + +T + L ++ ER+ Sbjct: 143 IRFVGKPKLRIEEDALRILRAFRFISK---LGFNLDKKTAEAI--CNKRKFLTKISKERI 197 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 + E L + ++ L ++ PE + H + D H + + Sbjct: 198 FDELSKILMGNFAKKALIEMKKLRVLEMIIPEFRYAYNFDQNNPIHTD-DLFNHIIKVIH 256 Query: 238 MAAMLSPQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + + RFA L HDLGK + + +GH + E+ + L+ NE Sbjct: 257 LC---DYDLITRFAALFHDLGKINAKIIDAKGIFHFYGHEKESALIAEEELRMLKASNET 313 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + + + + H LI + ++ KT+ KL ++ + +++L AD+ + G +S Sbjct: 314 INSVKKIIKNHMLI--YEDVSDKTLKKLIIEME----DKNLKRLFNLFYADLNSK-GIKS 366 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVV 379 + L+ W+ +++ + + Sbjct: 367 KK-ENEQILKNFWDKIENIKKQGKI 390 >UniRef50_C7N4V8 tRNA nucleotidyltransferase/poly(A) polymerase n=2 Tax=Slackia RepID=C7N4V8_SLAHD Length = 467 Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 84/261 (32%), Positives = 128/261 (49%), Gaps = 28/261 (10%) Query: 83 TLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRHV---SPAFGEDPLRVLRVA 139 ++E DL RRD T+NALA + N I+DP+ G+ D+ N +R V S F +DPLR+LR A Sbjct: 127 SVEKDLLRRDFTMNALAFNPNCGILDPFGGVKDISNETIRAVGEPSERFWQDPLRILRAA 186 Query: 140 RFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRD 199 RFA++ LGF + E+ + A L+H +R+ E E A + ++ Sbjct: 187 RFASQ---LGFDV--ESRTKEAALASAPLLKHAPAQRI--EAEFARLLQGDHARQAIMDW 239 Query: 200 CGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDV-RFATLCHDLG 258 + V PE + G+ K+H D HT T+S+A PQ V R+A HD+G Sbjct: 240 IDVIGVFIPEALPMKGLDQRTKYHI-YDVLEHTAYTVSLA----PQQRVLRYAAFLHDIG 294 Query: 259 KGLTPPELW-------PRHHGHGPAGVKLVEQLCQRLRV-PNEIRDLARLVAEFHDLIHT 310 K PE++ GH AG + EQ+C RL++ +E ++ LV D I Sbjct: 295 K----PEVFRIDEEGVGHSPGHAAAGAVISEQVCSRLKLREDEAAEICTLVGAHDDRISP 350 Query: 311 FPMLNPKTIVKLFDSIDAWRK 331 P K + +L ++ R+ Sbjct: 351 TPRSVRKALRRLGGNVRMLRE 371 >UniRef50_Q6AJ41 Related to poly(A) polymerase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ41_DESPS Length = 501 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 95/361 (26%), Positives = 162/361 (44%), Gaps = 54/361 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 ++++ GG VRD LG KD D +V G+ + +Q+G V L E + Sbjct: 46 EVWVAGGPVRDYFLGRSAKDLD-LVTGAGAIDFCRRLLRQLGEGSLVPLSEGDEEACRIV 104 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA------QDDNGEIIDPYNGLGD 115 + + A +LE+DL RD T+NA+A + + ++IDP++G D Sbjct: 105 YRHE-----IVDISSFRASASSLEEDLALRDFTLNAMALPLSTLRGEKVDLIDPFSGRDD 159 Query: 116 LQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGF--RIADETLALMREMTHAGELEHLT 173 L +++LR + AFG DPLR+LR RF + ++ L F IA +A H L + Sbjct: 160 LADKILRPLPEAFGRDPLRILRAFRFQSLFS-LSFDPAIAPAIIA------HRHLLSGVA 212 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E ++ L + + D G L +L PE+ + PA H +D H+L Sbjct: 213 AERISAELDATLMGTSALEALAGMEDLGILELLLPELSDGRDILQPAAHH--LDVYGHSL 270 Query: 234 MTLS----------MAAMLSPQVDVR-----------FATLCHDLGK----GLTPPELWP 268 M+ + ++D+ +A L HD+GK + + Sbjct: 271 ACFEKMHWLLAGGVMSFVSREELDLATLAKKTRLCLCWAALLHDVGKPGSRDIRATDGRI 330 Query: 269 RHHGHGPAGVKLVEQLCQRLRVPNEIRD-LARLVAEFHDLIHTFPM-----LNPKTIVKL 322 + H G ++V ++ RLR NE++D +ARLVA H + ++P+ +++L Sbjct: 331 TFYNHDERGARIVAKIGTRLRWSNEVKDAVARLVAMHMHPFHLCAVQQSGEVSPRAVLRL 390 Query: 323 F 323 + Sbjct: 391 Y 391 >UniRef50_A8ERU1 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ERU1_ARCB4 Length = 324 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 80/126 (63%), Gaps = 5/126 (3%) Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 +++L R E+K GS +T F +++ ++ RRD TINA+ D EI+DP++G+ D Sbjct: 11 DFSLPRIEKKVGSSHTDFEVSTNANLSFKEAAIRRDFTINAIGYDYFKNEILDPFDGMND 70 Query: 116 LQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 L+N++++H+ F ED LRV R +FA+R+ F+I + T L +++ +GEL+ L Sbjct: 71 LKNKIIKHIDDKTFVEDSLRVYRSVQFASRFE---FKIDENTKILCKKIVSSGELKFLPK 127 Query: 175 ERVWKE 180 ERV++E Sbjct: 128 ERVFEE 133 >UniRef50_Q04F51 tRNA nucleotidyltransferase/poly(A) polymerase n=2 Tax=Oenococcus oeni RepID=Q04F51_OENOB Length = 399 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 20/213 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEML-------DAGYQQVGRDFPVFLHPQTHE 56 Y VGG+VRDA+L P+ D D + + P EM + ++ G D VFL+ + +E Sbjct: 27 YFVGGSVRDAILRRPIHDVD-ITTDALPNEMKRIFKTADNYAGEKHGTDL-VFLNGKKYE 84 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 + + + + L++DL RRD TINA A + G++ D ++GL DL Sbjct: 85 VTTFRIDGKYLDNRHPKNVSFTK---NLKEDLSRRDFTINAFAMNQEGKLFDYFSGLNDL 141 Query: 117 QNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + +++R V A F ED LR+LR RF+++ L F+I +ETL + + L + Sbjct: 142 KKKIIRTVGDAKQRFSEDALRILRAFRFSSQ---LDFKIEEETLRASQMIKE--NLNDIA 196 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVL 206 ER++ E L +NPQ + + D G + L Sbjct: 197 TERIFVEFSKLLAGKNPQRSLRQMYDLGIVDFL 229 >UniRef50_A4W0U8 CCA-adding enzyme n=68 Tax=Streptococcaceae RepID=CCA_STRS2 Length = 403 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 74/191 (38%), Positives = 103/191 (53%), Gaps = 19/191 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQE--MLDAGYQQVGRDFPVFLHPQTHEEYALA 61 Y VGG+VRDA+LG P+ D D + S PQE + + VG + L + +EY + Sbjct: 28 YFVGGSVRDAILGRPIHDVD-IATSSYPQETKQIFSRTIDVGIEHGTVLVLEGKKEYEIT 86 Query: 62 --RTERKSGSGYTGFT--CYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RTE + Y F + +LE+DLKRRD T+NA A D+ +I+D ++G+ DL+ Sbjct: 87 TFRTEEE----YVDFRRPSQVSFVRSLEEDLKRRDFTVNAFALDEEAQIVDLFDGMTDLE 142 Query: 118 NRLLRHVS-PA--FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 NR LR V PA F ED LR++R RFAA L F I T M + A LE ++ Sbjct: 143 NRTLRAVGIPAERFNEDALRIMRGFRFAAT---LDFEIEPTTFEAM--VQTAPLLEKISV 197 Query: 175 ERVWKETESAL 185 ER + E + L Sbjct: 198 ERSFIEFDKLL 208 >UniRef50_A9F087 Cca protein n=2 Tax=Myxococcales RepID=A9F087_SORC5 Length = 460 Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 102/323 (31%), Positives = 145/323 (44%), Gaps = 36/323 (11%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHE------- 56 ++VGG VRD L G KD D V + P+E++ A +++V P + T Sbjct: 30 WIVGGCVRDLLRGQDAKDWD-VATDARPEEVV-AAFRKV---IPTGIQHGTVTVLVRGVP 84 Query: 57 -EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLG 114 E R + G D+T DL RRD T+NA+A D +G +IDP+ G Sbjct: 85 YEVTTLRGDGTYSDGRRPDRVEFVDDITA--DLARRDFTMNAIAIDPVDGHLIDPFGGRS 142 Query: 115 DLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL+ +++R V F ED LRVLR ARFAA L + ET M Sbjct: 143 DLEAKIIRAVGDPGERFAEDGLRVLRAARFAA---TLEGTLDPETERAMGTARSHQTFRC 199 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++ ERV E A+ R P V F+++R L + PE+ G +WH D H Sbjct: 200 VSAERVRDEWLKAMRARRPSVAFEIMRRTELLAITCPEMIESVGCEQ-NRWHA-YDVWGH 257 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPR-----HHGHGPAGVKLVEQLCQ 286 + L P+ +R A L HD+GK T E + + H G ++ + + Sbjct: 258 AMACLDAC---KPEPILRVAALMHDIGKPRT-REFSEKTKDYTFYEHERVGAEMADPILT 313 Query: 287 RLRVPNEIRDLARLVAEF-HDLI 308 RLR N+ R AR+VA H LI Sbjct: 314 RLRFSNDER--ARIVALIRHHLI 334 >UniRef50_B5YF98 PolyA polymerase family protein n=2 Tax=Dictyoglomus RepID=B5YF98_DICT6 Length = 845 Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 83/227 (36%), Positives = 106/227 (46%), Gaps = 32/227 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQ--THE-- 56 + IY +GG VRD LLG D D VV G + + G+ V HPQ T E Sbjct: 470 ISIYAIGGFVRDLLLGQSNFDLDIVVEGDIQLIISKIMDKWEGK---VITHPQFGTSEII 526 Query: 57 -------EYALARTERKSGSGYTGFTCYAAPDV---TLEDDLKRRDLTINALAQDDN--- 103 + A AR E G + P V +L DLKRRD TINALA N Sbjct: 527 LSDGKRIDIATARIEHYEEPG-------SLPKVERSSLWLDLKRRDFTINALAMSLNEEN 579 Query: 104 -GEIIDPYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMR 161 GEIID Y GL DL + LR + + +F EDP R+LR R AR LGF ++T L++ Sbjct: 580 FGEIIDLYGGLEDLTRKELRILHNLSFVEDPTRILRGIRLEAR---LGFTFEEKTFKLLK 636 Query: 162 EMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFP 208 E G L + ER+ E L P+ + L + AL +FP Sbjct: 637 EAIENGFLNKIAKERLKDEIILILQESQPEKVLKRLEELNALSYIFP 683 >UniRef50_Q834S5 CCA-adding enzyme n=40 Tax=Bacilli RepID=CCA_ENTFA Length = 406 Score = 94.4 bits (233), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 106/198 (53%), Gaps = 21/198 (10%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ--QVGRDFPVFLHPQTHEEYALA 61 Y VGG+VRDALL P+ D D + + P+E+ + VG + L ++Y + Sbjct: 28 YFVGGSVRDALLNKPIHDVD-IATSAYPEEIKQIFKRTVDVGIEHGTVLVLMEDQQYEV- 85 Query: 62 RTERKSGSGYTGFTCYAAPDV-----TLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 T ++ S Y F PD +L++DLKRRD TINALA D GEIID ++G+ DL Sbjct: 86 -TTFRTESTYQDFR---RPDEVTFVRSLKEDLKRRDFTINALALDSTGEIIDLFDGIEDL 141 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 N+ +R V F ED LR++R RFA++ L F+I ++TLA + E LE ++ Sbjct: 142 TNQTIRAVGNPHERFHEDALRMMRGLRFASQ---LDFKIEEKTLAAIAEFHPL--LEKIS 196 Query: 174 PERVWKETESALTTRNPQ 191 ER+ E L N Q Sbjct: 197 VERITIEFVKMLLGVNRQ 214 >UniRef50_C4F914 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F914_9ACTN Length = 481 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 111/353 (31%), Positives = 157/353 (44%), Gaps = 52/353 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQE----------MLDAGYQQVGRDFPVFL 50 ++ ++VGG VRDAL+G P D D GS + ++++G + G V Sbjct: 39 LEAWIVGGWVRDALMGAPGHDIDICCSGSWEESAAALRSRGIAVVESGVKFGGITAVVDG 98 Query: 51 HPQTHEEYALA--RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIID 108 Y L T+ + TC +EDDL RRD T+NA+A ++D Sbjct: 99 ARIEVTAYRLDGFYTDGRHPENVQRATC-------VEDDLARRDFTVNAMAWHPARGLLD 151 Query: 109 PYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 Y+G GDL+ R +R V F ED LR+LR RFA R L F + T + E Sbjct: 152 CYDGRGDLERRQIRAVGEPRRRFEEDALRMLRAVRFACR---LDFAMDPATAQALAEC-- 206 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 A L+ + ERV E E L TR+ ++R + PE+ + G +H Sbjct: 207 APLLDQVARERVGIELEGILVTRHGGD--ALIRYPELMCAAIPELARMRGFDQRTPYHA- 263 Query: 226 IDTGIHTLMTLSMAAMLS------------PQVDVRFATLCHDLGK--GLTPPELWPRH- 270 D HT L++A LS P + +A L HD+ K T E H Sbjct: 264 FDVYDHTARVLTVAGELSRFRIDGGDPSAPPSPSLMWAALLHDIAKPDCFTVDERGRGHF 323 Query: 271 HGHGPAGVKLVEQLCQRLRVPNE-IRDLARLVAEFHDLIHTFPMLNPKTIVKL 322 +GH AG KL E++ +RL N+ IRD++ L+ HD H P LNP I L Sbjct: 324 YGHPEAGAKLAEKIIRRLSCSNDLIRDVSLLI---HD--HDCP-LNPDRISLL 370 >UniRef50_Q1J0S0 Metal dependent phosphohydrolase n=3 Tax=Deinococcus RepID=Q1J0S0_DEIGD Length = 433 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 111/311 (35%), Positives = 145/311 (46%), Gaps = 33/311 (10%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR-DFPVFLHPQTHEEYALART 63 LVGGA RD L G+ KD DW V P++ QVG FP+ E R Sbjct: 17 LVGGAARDWLRGVAPKDFDWAV--PKPEQAAGVLAAQVGGLAFPL------DEARGYWRV 68 Query: 64 ERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRH 123 G + A DVT DDL RRD T+NA+A +G+++DP G DL+ R LR Sbjct: 69 HVPGGVQHDFVPLPA--DVT--DDLLRRDFTVNAIALTADGQLLDPAGGRDDLRARRLRM 124 Query: 124 VSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH---AGELEHLTPERVWK 179 VS +DPLR R RF LG R+ T A +R + AG+L+ PERV Sbjct: 125 VSEMNLRDDPLRAWRAVRF---EVTLGLRLDPATEAAVRRVAADLAAGQLQLPAPERVRD 181 Query: 180 ETESALTTRNPQVFFQVLR--DCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 E ++ L +PQ +LR G L + PE+ GVP H +D H L L Sbjct: 182 ELQALLA--HPQAAPSILRLEALGLLALSLPELREGIGVPQGGFHH--LDVFEHALEALH 237 Query: 238 MAAMLSPQVDV--RFATLCHDLGKGLT-PPELWPRH---HGHGPAGVKLVEQLCQRLRVP 291 P D+ R+ATL HD+GK T + P +GH G +L Q RLR+P Sbjct: 238 QLLARFPDSDLPLRWATLLHDVGKPRTRNTSVRPDRTTFYGHERVGAELARQALTRLRLP 297 Query: 292 N-EIRDLARLV 301 E+ +A LV Sbjct: 298 GAEVDRVAALV 308 >UniRef50_A6CRX0 tRNA nucleotidyltransferase n=1 Tax=Bacillus sp. SG-1 RepID=A6CRX0_9BACI Length = 395 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 31/218 (14%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-------LDAGYQQVGRDFPVFLHPQTHE 56 Y VGGAVRD LL P D D + + PQE+ +D G + V ++ +T Sbjct: 26 YFVGGAVRDLLLNRPTNDID-IATSALPQEVKGVFPKTIDVGIEH---GTVVVIYNETPY 81 Query: 57 EYALARTERKSGSGYTGFTCYAAPDV-----TLEDDLKRRDLTINALAQDDNGEIIDPYN 111 E R+E + + + P+ +L++DL+RRD TINA+A D +G I DP+ Sbjct: 82 EITTFRSEEE-------YKDHRRPESVTFIKSLKEDLQRRDFTINAIAMDRSGTIHDPFG 134 Query: 112 GLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G D++ + +R V A F ED LR++R RF A+ LGF++ ++T ++ + Sbjct: 135 GEVDIKAKTIRTVGSADERFKEDALRMMRAVRFMAQ---LGFKMENDTFESIKR--NGNT 189 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVL 206 L+++ ER+ E E L R + F+ L + G + L Sbjct: 190 LKYIAVERLSAEFEKLLGGRFKKASFESLSETGLYQFL 227 >UniRef50_C0WDS1 Metal-dependent phosphohydrolase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WDS1_9FIRM Length = 484 Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 103/323 (31%), Positives = 141/323 (43%), Gaps = 57/323 (17%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQE----MLDAGY---QQVGRDFPVF--LHPQT 54 Y+VGGAVRD L G D D +V + P+E AG + +G +F V L Sbjct: 24 YVVGGAVRDLLCGKHPHDYD-IVTSARPEETRRLCKGAGLSVVENLGENFGVLVLLVEGR 82 Query: 55 HEEYALARTE-------RKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEII 107 E A R E R SG Y C TLE+DL RRD T+NA+A D G + Sbjct: 83 AVEVAAYRKEVYGTDAHRPSGVAY----CQ-----TLEEDLARRDFTVNAMAMDLAGNLT 133 Query: 108 DPYNGLGDLQNRLLRHV-SPA--FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 DPY+G DL++ +LR V SP+ F ED LR+ R RF A+ LGF L ++ Sbjct: 134 DPYSGQRDLEHHVLRVVGSPSDRFSEDALRMFRACRFVAQ---LGFLPEAGILPAIK--A 188 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCG----ALRV----------LFPEI 210 A + L+ RV E L ++ G + R+ + PE+ Sbjct: 189 EAPRAKGLSLSRVKAELHKLLRAPYAGQGMNLMVQSGLAGMSCRIKKEGTYESVPILPEL 248 Query: 211 DALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP-----PE 265 L GVP ++HP D H L + + + +A L HD+GKG P+ Sbjct: 249 LDLVGVPQNPRFHP-FDVWGHIWHALDHS---DGSLTLGWAILLHDVGKGRKGVRGIRPD 304 Query: 266 LWPRHHGHGPAGVKLVEQLCQRL 288 P HGH G + E + RL Sbjct: 305 GMPSDHGHDKVGKAMAESILHRL 327 >UniRef50_A4J3L2 Polynucleotide adenylyltransferase region n=4 Tax=Peptococcaceae RepID=A4J3L2_DESRM Length = 907 Score = 94.4 bits (233), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 79/227 (34%), Positives = 109/227 (48%), Gaps = 30/227 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 ++Y VGG VRD LL + D D VV G+ + + GR P HE++ A Sbjct: 478 QVYAVGGLVRDVLLKVENLDVDLVVEGNGIEMANELAKVIGGRVRP-------HEKFGTA 530 Query: 62 RTERKSG------SGYTGFTCY--AAPDV---TLEDDLKRRDLTINALAQDDN----GEI 106 G + + Y A P V +L+ DL RRD TINA+A N GE+ Sbjct: 531 EIIFPDGYWVDVVTARVEYYEYPAALPQVEQSSLKHDLYRRDFTINAMAVALNPERFGEL 590 Query: 107 IDPYNGLGDLQN---RLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREM 163 +D +NG DLQN R+L ++S F EDP R+LR RF RY I +TL L++E Sbjct: 591 VDYFNGREDLQNGAIRVLHNLS--FIEDPTRILRAIRFEQRY---DMDIEPQTLRLIKEA 645 Query: 164 THAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEI 210 + L+ ER+W E + L +P+ L + G LFPEI Sbjct: 646 VREKVIARLSTERMWGELKHILEEADPEHMLDRLSELGVWDYLFPEI 692 >UniRef50_B1MYC1 CCA-adding enzyme n=7 Tax=Lactobacillales RepID=CCA_LEUCK Length = 403 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 102/197 (51%), Gaps = 31/197 (15%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-------LDAGYQQVGRDFPVFLHPQTHE 56 Y VGGAVRD LL P+ D D + + P+E+ +D G Q V H +E Sbjct: 28 YFVGGAVRDMLLNKPIHDVD-IATSAFPEEIKALFTKTVDTGIQH--GTVMVLDHGDGYE 84 Query: 57 EYALARTERKSGSGYTGFTCYAAPDV-----TLEDDLKRRDLTINALAQDDNGEIIDPYN 111 RTE S YT F PD +L +DLKRRD TINA+A +G+IID ++ Sbjct: 85 ITTF-RTE----STYTDFR---RPDKVTFVRSLAEDLKRRDFTINAIAMTKDGDIIDLFD 136 Query: 112 GLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 GL D+ + +R V A F ED LR++R RF+A+ LGF IA T A ++++ Sbjct: 137 GLTDMAQKRIRAVGDAEVRFNEDALRIMRALRFSAQ---LGFDIAPHTKAALKQI--GRN 191 Query: 169 LEHLTPERVWKETESAL 185 LE + ER+ E E L Sbjct: 192 LEKIAVERIRVEFEKLL 208 >UniRef50_A6P236 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P236_9BACE Length = 438 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 94/328 (28%), Positives = 147/328 (44%), Gaps = 35/328 (10%) Query: 4 YLVGGAVRDALLGLPVKDRDW-VVVGSTPQEM--LDAGYQQVGRDFPVFLHPQTHEEYAL 60 +LVGGAVRD ++G +DW + + PQ++ + +GY + + + Sbjct: 22 FLVGGAVRDYVMGKRAA-KDWDIATSALPQQVKAVFSGYHLIETGLKHGTVTVVVDHQPI 80 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 T ++ SG P +L DL+RRD T+NALA + ++D G GD++ + Sbjct: 81 EITTYRTDSG--------CPSPSLRADLERRDFTMNALAYNPRTGVVDLVGGAGDIEKGI 132 Query: 121 LRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +R F ED LR+LR RFA+ Y G I T +R + L + ER+ Sbjct: 133 VRCTGDPDRRFREDGLRILRALRFASVY---GMEIDAATADAIRR--NQSLLRGVAVERI 187 Query: 178 WKETESALTTRNPQVFFQVLRD-CGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 E L +N VL D G L V PE+ +FG A+ +P D + T+ Sbjct: 188 QVELTGILCGKNAAA---VLSDFAGVLAVTVPELAPMFGF---AQHNPHHDKDVWN-HTV 240 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 ++ +SPQ +R+A L HD+GK L + GH L + RLR N Sbjct: 241 AVVENVSPQPVLRWAALLHDIGKPLCFSRTEDGVGHFFGHAQKSALLAGDILSRLRFDNA 300 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVK 321 R+ + +HD+ P+ + +VK Sbjct: 301 GRERIVRLVRYHDM----PITADRKLVK 324 >UniRef50_Q0FDP1 Poly A polymerase family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FDP1_9RHOB Length = 383 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 10/214 (4%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT----HEE 57 ++ VGG VR++LLGLP+ D D + + P E+++ + + P ++ T Sbjct: 26 QVLFVGGCVRNSLLGLPITDID-ISTNARPDEIINLAKKAGLKSIPTGINHGTITIISNN 84 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 A T + G A +EDD +RRD TINA+ +G IIDP NG+ DL+ Sbjct: 85 KAFEVTSFRKDIKTDGRHATVAYSDKIEDDAERRDFTINAIYMTTDGIIIDPLNGMKDLK 144 Query: 118 NRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 R +R + + ED LR+LR RF A Y I E L+ + + L Sbjct: 145 KRHVRFIKDPNKRIIEDYLRILRFFRFTAEYGDPDLGIDAEGLSAC--AANIDGIALLAK 202 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFP 208 ERV E L T+NP + G L + P Sbjct: 203 ERVGSEIRKILKTQNPSSVLAAMEISGILSNILP 236 >UniRef50_B4CZL9 tRNA adenylyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL9_9BACT Length = 447 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 90/294 (30%), Positives = 135/294 (45%), Gaps = 15/294 (5%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLHPQTHEEYALA 61 Y GG VRD L+G+ D D + + P+++ + + VG F V + Q E+ +A Sbjct: 26 YYAGGCVRDQLMGVEPHDYD-IATNAHPEQVQNLFRRTIAVGAHFGVIIVLQDDFEFQVA 84 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQNRL 120 T R G G + T E+D RRD TIN L D G++ID G DL ++ Sbjct: 85 -TFRNDGQYIDGRRPESVSFATPEEDATRRDFTINGLFFDPIAGKLIDYVGGQQDLAKKM 143 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LR + + LR+ R A L F + T + E +A + ++ ER+ +E Sbjct: 144 LRAIGNPYDRLREDRLRLLRAVRFGATLCFDLDGATWRAVCE--NARHIHEVSAERIREE 201 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 + F +L + G + + PEI+AL G P ++HPE D +HT + M Sbjct: 202 LVKIFLSPKRVRGFDLLDESGLMAAVLPEIEALKGCEQPPQFHPEGDVFVHTRI---MLG 258 Query: 241 MLSPQVDV--RFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLR 289 +L QV V + L HD+GK T P+ R GH G ++ E L RLR Sbjct: 259 LLPTQVSVPLVLSVLFHDIGKPGTYAVDPDGRIRFSGHDKLGAEMTEALMSRLR 312 >UniRef50_Q6MM27 Poly A polymerase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MM27_BDEBA Length = 397 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 114/215 (53%), Gaps = 21/215 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQ--EMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 +L GG VRDALLG+ D D + +TP+ E L + VG+ F V + +A Sbjct: 29 FLAGGCVRDALLGVQAHDLD-LATNATPEKVESLFSKTVNVGKSFGVMRVLVEGADIEVA 87 Query: 62 RTERKSGSGYTG----FTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 T R G+ G +++P ++D +RRD T+NAL D +++D G DL Sbjct: 88 -TFRNDGTYSDGRRPENVVFSSP----QEDAQRRDFTVNALFYDLATAQVLDYVEGQKDL 142 Query: 117 QNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + R+LR V A F ED LR+LR ARF+A L F + + A +++M A +++ ++ Sbjct: 143 KARVLRTVGDAERRFEEDHLRLLRAARFSA---QLNFELEPVSFAAVKKM--AEKVKSVS 197 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFP 208 ER+ +E L T + QV++D G ++VLFP Sbjct: 198 GERIREEMTKLLKTEHADHGLQVMKDSGLMKVLFP 232 >UniRef50_A8UST1 Poly A polymerase n=2 Tax=Aquificaceae RepID=A8UST1_9AQUI Length = 835 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 85/280 (30%), Positives = 127/280 (45%), Gaps = 50/280 (17%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHP----------- 52 Y+VGG VRD LLG V D D+V+ G + +++ R+ V HP Sbjct: 458 YIVGGVVRDILLGKDVWDLDFVIEGDAIRVA-----EELAREHGVQPHPFPEFGTAHVKV 512 Query: 53 -QTHEEYALARTERKSGSGYTGFTCYAAPDV---TLEDDLKRRDLTINALA----QDDNG 104 E+A AR E G A P V +L++DL RRD TINA+A +D G Sbjct: 513 GSLKLEFATARRETYPRPG-------AYPKVEKASLKEDLVRRDFTINAMAISVNPEDMG 565 Query: 105 EIIDPYNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREM 163 +ID + G+ DL+++++R + P +F EDP+R+LR RFA R LGF+++ T L+++ Sbjct: 566 TLIDYFGGIRDLKDKIVRVLHPVSFIEDPVRILRALRFAGR---LGFKLSKSTERLLKQA 622 Query: 164 THAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEI-------DALFGV 216 + G LE R+ E AL + R L + D L + Sbjct: 623 VNLGLLEEAPRGRIMNEIRLALREDRLLEILSLYRKFKVLEHVIKGFRWTQNLEDRLINL 682 Query: 217 PAPAKWHP------EIDTGIHTLMTLSMAAMLSPQVDVRF 250 WH +D G LM + + + P+V RF Sbjct: 683 KKVTDWHSLEFPSERVDYGWVFLMVI--LSTVKPEVSERF 720 >UniRef50_Q30ZL6 tRNA nucleotidyltransferase, putative n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30ZL6_DESDG Length = 368 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 93/332 (28%), Positives = 135/332 (40%), Gaps = 44/332 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEML-DAGYQQVGRDFPVFLHPQTHEEYA 59 M+ +LVGGAVRD LLG ++ D+V GS + +L ++ G F + + Sbjct: 6 MQTFLVGGAVRDMLLGRTPREYDYVFSGSLEEFLLRHKTARRAGTQFSIAI--------- 56 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ-N 118 Y G T+ +DL RD T+NA+A D +G + L DL + Sbjct: 57 -----------YNGLEFAPMRGKTIHEDLASRDFTVNAMALDADGRLFAHPEALRDLALH 105 Query: 119 RLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 RL S A +DP+R+ R ARF A GF I+ + MR +G++ PER+ Sbjct: 106 RLSPASSHALADDPVRLFRAARFTATLP--GFHISADLKRAMRAEAGSGKIMDAAPERIG 163 Query: 179 KETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH-TLMTLS 237 E L + P F + L + L E APA+ E +H T + Sbjct: 164 SEIHKVLHSARPGNFLRTLNEADCLTAWLQEF-------APAE---EDAAALHRTADIMD 213 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTP---PELWP---RHHGHGPAGVKLVEQLCQRLRVP 291 AA + V + LCHDL G T P P R A + R++ P Sbjct: 214 RAAGVPMAV---WMALCHDLNTGATQSPLPAAAPTPVRKQPQHHAAAPAARRFAMRIKAP 270 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLF 323 N A + A H +P L ++ V L Sbjct: 271 NSFVRAAEVAASCHKEGMHYPALKAESRVSLL 302 >UniRef50_A4IQ63 CCA-adding enzyme n=11 Tax=Bacillaceae RepID=CCA_GEOTN Length = 404 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 70/197 (35%), Positives = 102/197 (51%), Gaps = 31/197 (15%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEML-------DAGYQQVGRDFPVFLHPQTHE 56 Y VGGAVRD LLG P+ D D + + P E++ D G + V +H T Sbjct: 23 YFVGGAVRDLLLGRPIGDVD-IATSALPDEVMAIFPKTIDVGSKH---GTVVVVHEGTAY 78 Query: 57 EYALARTERKSGSGYTGFTCYAAPDV-----TLEDDLKRRDLTINALAQDDNGEIIDPYN 111 E RT+ + + P+ +LE+DLKRRD T+NA+A D++G IIDP+ Sbjct: 79 EVTTFRTD-------GDYEDHRRPESVTFVRSLEEDLKRRDFTMNAIAMDEHGTIIDPFG 131 Query: 112 GLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G ++ RL+R V A F ED LR++R RF + LGF +A +T + + +A Sbjct: 132 GQEAIEKRLIRTVGEADARFREDALRMMRAVRFV---SQLGFSLAIDTKKAI--IANAPL 186 Query: 169 LEHLTPERVWKETESAL 185 L H++ ER+ E E L Sbjct: 187 LAHISVERMTMEMEKLL 203 >UniRef50_UPI00016985D9 multifunctional tRNA nucleotidyl transferase/2''''3''''-cyclic phosphodiesterase/2''''nucleotidase/phosphatase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016985D9 Length = 130 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 39/59 (66%), Positives = 51/59 (86%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYA 59 M+ YLVGGAVRD LLGLPV +RD++VVG+TP+++L G++QVGRDFP+F+HPQ EYA Sbjct: 1 MQTYLVGGAVRDRLLGLPVTERDYLVVGATPEQLLQQGFRQVGRDFPIFIHPQDGSEYA 59 >UniRef50_C5RPI7 tRNA adenylyltransferase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RPI7_CLOCL Length = 454 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 82/325 (25%), Positives = 151/325 (46%), Gaps = 39/325 (12%) Query: 4 YLVGGAVRDALLGLPVKDRDW-VVVGSTPQEMLDAGYQQVGRDFPVFLHPQT------HE 56 ++VGG VRD++LG +K +DW + + P+E+++ + P + T E Sbjct: 28 FIVGGCVRDSILG--IKPKDWDITTSAEPEEIIELFNSEGCTTVPTGIKHGTITVVIEKE 85 Query: 57 EYALARTERKSGS-------GYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDP 109 + + T R G FT +LE+DLKRRD TINA+A +D ++D Sbjct: 86 PFEIT-TYRIDGEYKDSRHPSEVKFT------KSLEEDLKRRDYTINAMAYNDKVGLVDY 138 Query: 110 YNGLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 +NG D+ +L+R V ED LR+LR RF+A+ LGF+I ET ++ + + Sbjct: 139 FNGQEDIDKKLIRAVGEPKKRLEEDALRMLRAHRFSAQ---LGFKIEKETSEAIKAL--S 193 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 + ++ ER+ +E L + N FQ L + G L+ F E+ F +K +I Sbjct: 194 VNIRQVSIERIREEFNKILLSNNLVQLFQ-LYENGLLQHFFGELANCF---ERSKKKGDI 249 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATL---CHDLGKGLTPPELWPRHHGHGPAGVKLVEQ 283 H + + + + ++ +R+A L ++ L + P + Sbjct: 250 SIYSHVYL-IELLQSIEKELSLRWAILINYINEFSYNLEDTLVKPNQCKYSTTSQDCASN 308 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLI 308 + +R++ N+ + ++A++ ++I Sbjct: 309 ILKRMKYDNKTIERVLVLAKYQEVI 333 >UniRef50_C4G3Z5 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G3Z5_ABIDE Length = 403 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 75/230 (32%), Positives = 116/230 (50%), Gaps = 40/230 (17%) Query: 4 YLVGGAVRDALLG-LPVKDRDW-VVVGSTPQEM-------LDAGYQQVGRDFPVFLHPQT 54 Y VGG VRD++L +P DW + + P+E+ +D G Q V + + Sbjct: 24 YAVGGCVRDSILDRIP---EDWDITTSAKPEEVKKLFPATIDTGLQH--GTVTVVIEKEG 78 Query: 55 HEEYALARTERKSGSGYTG-------FTCYAAPDVTLEDDLKRRDLTINALAQDDNGEII 107 +E T R G G FT +L +DLKRRD TINA+A + +I Sbjct: 79 YE----VTTFRLDGDYSDGRHPDRVAFTS------SLTEDLKRRDFTINAMAYSEITGLI 128 Query: 108 DPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 D ++G DL++ ++R V A F ED LR+LR RFA L F IA++T +++++ Sbjct: 129 DRFDGEKDLEDGIIRAVGDAEERFSEDALRMLRAIRFA---GQLNFDIAEKTFDAIKKLS 185 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALF 214 + ++ ER+ KE E L + NP+ + ++ + G V+ PEI ALF Sbjct: 186 P--NISKVSVERIAKELEKLLLSGNPE-YIGLVYEAGIFEVIAPEIAALF 232 >UniRef50_C8NF31 Poly A polymerase n=2 Tax=Granulicatella RepID=C8NF31_9LACT Length = 409 Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 68/193 (35%), Positives = 101/193 (52%), Gaps = 21/193 (10%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFLHPQTHEEYALAR 62 VGG+VRD +LG + D D + +TP+E+ L + VG + L + Y + Sbjct: 35 FVGGSVRDLVLGKEISDVD-IATSATPEEVKSLFSHTVDVGIEHGTVLVIYHQDSYEVT- 92 Query: 63 TERKSGSGYTGFTCYAAPDV-----TLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 T R G+ + + PD +LE+DL RRD TINALA +D EI+D ++GL DL+ Sbjct: 93 TFRTEGT----YQDFRHPDSVTFVRSLEEDLMRRDFTINALAINDQEEIVDYFDGLKDLE 148 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 N ++R V F ED LR++R RFA + LGF I +T +R + LE + Sbjct: 149 NSIIRCVGNPMERFNEDALRMMRAIRFAGQ---LGFTIESKTFNAIRVL--KSNLERVAV 203 Query: 175 ERVWKETESALTT 187 ER+ E E + + Sbjct: 204 ERMKVEFEKMIVS 216 >UniRef50_A8F7Y4 CBS domain containing protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F7Y4_THELT Length = 875 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 34/226 (15%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVV------VGSTPQEMLDAGYQQVGRDF--PVFLHPQT 54 +Y VGG VRD L+G P D D VV + L+A + + +F Sbjct: 479 VYTVGGFVRDLLMGNPNYDIDIVVEKDGLSLADLAARKLNAKLVKYEKFLTASLFCKDGL 538 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPD-------VTLEDDLKRRDLTINALA----QDDN 103 + A ARTE Y AP T++ DL RRD TINA+A Q D Sbjct: 539 RIDVATARTEY-----------YEAPTELPQVEVSTIKKDLYRRDFTINAMAIKLNQKDF 587 Query: 104 GEIIDPYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMRE 162 G +ID + DL ++L+R + + +F EDP R+LR RF R+ GF+I +T LM + Sbjct: 588 GLLIDFFGAKKDLDSKLIRCLHTLSFVEDPTRILRAVRFETRF---GFKIEQQTARLMLD 644 Query: 163 MTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFP 208 H G LE ++ +R+ +E E L ++ + L D ++ +FP Sbjct: 645 AVHQGYLEKVSGQRLRQEFEKILEEKSVFEALKRLSDFEVIKHMFP 690 >UniRef50_C0ZCG8 Probable tRNA CCA-adding enzyme n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCG8_BREBN Length = 407 Score = 91.3 bits (225), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 83/256 (32%), Positives = 120/256 (46%), Gaps = 31/256 (12%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-----------LDAGYQQVGRDFPVFLHP 52 Y VGG VRD LL PV D D + + P ++ L G V + +F Sbjct: 21 YYVGGCVRDWLLQRPVHDID-ICTNAHPGDVILLFPDHVPTGLKHGTVSVKVEGQLF--- 76 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 E RTE K ++ L DL+RRD T+NA+A D + + DP+ G Sbjct: 77 ----EVTTFRTEGKYEDYRRPAEVQFVSELRL--DLERRDFTMNAMAMDRHQVLHDPFGG 130 Query: 113 LGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 D+++RL+R V F ED LR+LR RFA++ LGF I D+T+ M++M A L Sbjct: 131 QEDIEHRLVRAVGIPLERFQEDALRLLRGVRFASQ---LGFVIEDQTMLAMKQM--APLL 185 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH-PEIDT 228 H+ ER+ +E L ++ P+V Q+L + L PE++ LF + W + T Sbjct: 186 AHIAVERIREELNKTLDSKAPEVGCQLLNET-RLMAYAPEVEKLFILSNEHAWRLRHLQT 244 Query: 229 GIHTLMTLSMAAMLSP 244 L AA SP Sbjct: 245 VTQKWSLLLFAANYSP 260 >UniRef50_A0Q3L3 PolyA polymerase family protein n=2 Tax=Clostridium RepID=A0Q3L3_CLONN Length = 457 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 90/336 (26%), Positives = 139/336 (41%), Gaps = 56/336 (16%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 +Y++GG +RD LL +D LD Y D +FL T + + + Sbjct: 19 VYIIGGYIRDKLLNTKEASKD-----------LDIIYNG---DIKLFLDKLTMDGFHIV- 63 Query: 63 TERKSGSGYTGFTCYAAPDVTL------EDDLKRRDLTINALAQD--DNGEIIDPYNGLG 114 T + Y D+ L E+DL +RD TINA+A DN +IIDP+NG Sbjct: 64 TLKDEQQIYRAILNDITVDIALIKGESIEEDLSKRDFTINAIALKLIDN-KIIDPFNGRR 122 Query: 115 DLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 L +L+ V+ + +D +R+LR RFA +Y G + E + + H + Sbjct: 123 HLNAKLIHTVNENSISDDSVRILRAYRFAIKY---GMHFSKECEKQIIDNKH--NIMKFP 177 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH-T 232 ER++ E + F+ L G L+ L P ID L V K+H E D H Sbjct: 178 KERIFNEFMQIIKCDKFGRAFEELDTLGVLKNLLPYIDELKTV-GRCKYHIE-DAFTHMN 235 Query: 233 LMTLSMAAMLSPQVDVR---------------------FATLCHDLGKGLTPPELWPR-- 269 L+ + A+L+ ++ + FA CHD+GK + E R Sbjct: 236 LVYKNSKALLNGELFIEGLELNIFNNNIGEFLISEYFSFAAFCHDIGKFVCHREKDGRVS 295 Query: 270 HHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFH 305 GH G K++ +C + P E + + E H Sbjct: 296 FIGHDKEGAKIMMDICNKFGFPKEAKKFICSLIEAH 331 >UniRef50_A8FEH9 CCA-adding enzyme n=5 Tax=Bacillus RepID=CCA_BACP2 Length = 400 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 78/203 (38%), Positives = 104/203 (51%), Gaps = 19/203 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQ--EMLDAGYQQVGRDF--PVFLHPQTHEEYA 59 Y VGGAVRD LLG + D D + +TP E L VG++ + LH E Sbjct: 23 YFVGGAVRDVLLGREIGDID-IATDATPDTVESLFEKTVDVGKEHGTVIVLHDGMSYEVT 81 Query: 60 LARTERKSGSGYTGFT--CYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RTE S Y F A +L++DL RRDLTINA+A D NGEIID G D++ Sbjct: 82 TFRTE----SEYEDFRRPKEVAFITSLKEDLLRRDLTINAMAMDINGEIIDHVGGKQDIE 137 Query: 118 NRLLRHV-SPA--FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 + ++ V PA F ED LR++R RF ++ LGF +A ET M + H L +++ Sbjct: 138 RKRIQTVGDPACRFQEDALRMMRAIRFLSQ---LGFELAAETAEAMEKDKHL--LANISV 192 Query: 175 ERVWKETESALTTRNPQVFFQVL 197 ER E E L R + +VL Sbjct: 193 ERKKIEMEKLLKGRYCERAIKVL 215 >UniRef50_Q3AAR6 PolyA polymerase family protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AAR6_CARHZ Length = 864 Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 25/225 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+++LVGG VRD LLG KD D VV G ++ A Q+VG+ + HE + Sbjct: 474 MRVFLVGGIVRDLLLGHKQKDLDIVVEGDA---LVLA--QEVGKTLSA-IKFIPHERFKT 527 Query: 61 ARTERKSGSGYTGFTC--------YAAPDV---TLEDDLKRRDLTINALAQDDN----GE 105 A K+G T A P+V T+ +DL RRD TIN++A + GE Sbjct: 528 ASIILKNGQKIDFSTSRVEFYQHPAALPEVEVSTIREDLYRRDFTINSMAIEITYGHIGE 587 Query: 106 IIDPYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 + DP+ GL DL+ ++R + + +F EDP R+LR RF R+ F++ + T L+ + Sbjct: 588 LFDPFGGLLDLREGIIRVLHNLSFVEDPTRILRALRFLGRF---NFKLEENTEKLLVDAI 644 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPE 209 G L ++ R+ E + ++ + L+ G + +FP+ Sbjct: 645 AGGFLNLVSSARILYELKLIFAEKDILKILKFLKHYGVFQEVFPK 689 >UniRef50_C5CF12 CBS domain containing protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CF12_KOSOT Length = 866 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 73/228 (32%), Positives = 107/228 (46%), Gaps = 34/228 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGS------TPQEMLDAGY--QQVGRDFPVFLHP 52 M YLVGG VRD LL +P D D VV G T + D + + +F Sbjct: 471 MPTYLVGGMVRDLLLNIPNYDIDVVVEGDARIFSHTVKRYFDVKIVEHKSFKTSSIFFSD 530 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDV-------TLEDDLKRRDLTINALA----QD 101 + A ARTE Y P V T++ DL RRD +INA+A + Sbjct: 531 GVRIDVATARTE-----------FYEEPAVLPNVETSTIKKDLYRRDFSINAMAIKLNHE 579 Query: 102 DNGEIIDPYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALM 160 + G ++D + DL ++R + + +F EDP R+LR RF R+ GF+I + TL L+ Sbjct: 580 EYGLLLDFFGCRKDLAKGIIRILHNLSFIEDPTRILRAIRFEQRF---GFKIEERTLQLL 636 Query: 161 REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFP 208 ++ + G LE +T +R+ E E L PQ + + L+ LFP Sbjct: 637 KKAVNDGYLERVTGQRLRDELEKILAEPEPQNAVKRMTKLDILKHLFP 684 >UniRef50_Q97M87 PolyA polymerase n=1 Tax=Clostridium acetobutylicum RepID=Q97M87_CLOAB Length = 458 Score = 90.9 bits (224), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 94/441 (21%), Positives = 179/441 (40%), Gaps = 85/441 (19%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ Y+VGG +RD L+ D LD +Q DF L + + Sbjct: 17 MEAYIVGGYIRDKLMNPKNSASD-----------LDIAFQG---DFEKILDELRKRKIKV 62 Query: 61 ARTERKSGSGYTGFTCYAAPDVT------LEDDLKRRDLTINALAQD-DNGEIIDPYNGL 113 + ++ S Y A D++ + +DL +RD T+NA+A D N +I+DP++G Sbjct: 63 SSIKKDSSVYRITVNGYCA-DISKIKGKNINEDLSKRDFTVNAIALDIKNNKIVDPFDGR 121 Query: 114 GDLQNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 ++ R+L+ + +F +D +R+LR RF +Y G T +R+ H+ + Sbjct: 122 VHIKRRILQVIDEKSFEDDAVRILRGIRFYIKY---GMHFNGYTEEYIRK--HSKNIMKF 176 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH-----PEID 227 +RV E + VFF+V+ L+ + P ++ L V K H ++ Sbjct: 177 PRDRVLDEIIHIIHEDENGVFFEVMDQYMILKNILPYMEELKTV-GKCKHHLVDAFTHMN 235 Query: 228 TGIHTLMTLSMAAMLSPQVDVR----------------FATLCHDLGKGLTPPELWPR-- 269 T H + + +++ FA HD+GK ++ + + Sbjct: 236 TAYHVFKDMKKKYLKVKNINIEEFNKDIGVYNELDYLAFAIFTHDIGKYVSYKKEGQKIS 295 Query: 270 HHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAW 329 GH G++++E++C L+ PN+ + + V + H +P++ LF + Sbjct: 296 FKGHDEKGLEIIEKVCDELKFPNDGKKIVCSVVK----NHMYPLM-------LFKLKEDE 344 Query: 330 RKPQRVE----------QLALTSEADVRGRTGFESADYPQGRWLREAWEVA--------- 370 RK + E + + S DV T + + + R+ E+ Sbjct: 345 RKQEEYEFFNKFDQYVPHIIVASFCDVYATTIYIDENNEKDRFTSFISELVVKYREFINL 404 Query: 371 ---QSVPTKAVVEAGFKGVEI 388 + + +++ GF+G +I Sbjct: 405 KKIKYIDGNDLIDMGFRGNDI 425 >UniRef50_A1UTI1 TRNA-nucleotidyltransferase n=4 Tax=Rhizobiales RepID=A1UTI1_BARBK Length = 417 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 73/223 (32%), Positives = 106/223 (47%), Gaps = 17/223 (7%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEML----DAGYQQV--GRDFPVFLHPQTHEEY 58 +VGGAVR+ LLG P+ D D + PQ+++ +AG++ V G DF E Sbjct: 34 VVGGAVRNQLLGQPISDID-IATTCLPQQVIKRVEEAGFKAVPTGIDFGTV--TVVSESC 90 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + T +S G A + D +RRD TINAL D G++ D GL D+ + Sbjct: 91 SYEVTTLRSDVETDGRYAKVAFGRDWKKDAERRDFTINALYCDATGQLYDLVGGLSDIAS 150 Query: 119 RLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 R +R + A ED LR+LR RF A Y R + L + H L L+ E Sbjct: 151 RTIRFIGVAEQRICEDYLRILRFFRFFAWYG--AGRPDAQGLKACVALKHG--LHKLSSE 206 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA 218 RVW+E + L +P +R G L ++FPE + +G+ A Sbjct: 207 RVWEEIKKLLAASDPTRALLWMRQSGILTLIFPETEK-WGIDA 248 >UniRef50_C0WTJ5 tRNA nucleotidyltransferase/poly(A) polymerase n=4 Tax=Bacilli RepID=C0WTJ5_LACBU Length = 405 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 31/192 (16%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-------LDAGYQQVGRDFPVFLHPQTHE 56 Y VGG+VRD +L P+ D D + + P E+ D G + + L T Sbjct: 33 YFVGGSVRDTILQRPIHDVD-IATSAYPSEVKSLFKRTADTGIEH---GTVMILDHGTGY 88 Query: 57 EYALARTERKSGSGYTGFTCYAAPDV-----TLEDDLKRRDLTINALAQDDNGEIIDPYN 111 E RTE +G+ Y PD +L++DLKRRD TINALA +NG+I D + Sbjct: 89 EVTTFRTE-------SGYQDYRRPDKVTFVRSLKEDLKRRDFTINALALSENGKITDLFG 141 Query: 112 GLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 GL D+ +++R V F ED LR++R RFA++ L F+I +TL + + H+ Sbjct: 142 GLNDMSKKIIRAVGDPEERFNEDALRMMRAVRFASQ---LDFKIEQQTLTGIYD--HSEL 196 Query: 169 LEHLTPERVWKE 180 L+ + ER+ E Sbjct: 197 LKKIAVERIHSE 208 >UniRef50_A6DP87 Putative poly(A) polymerase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DP87_9BACT Length = 385 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 84/266 (31%), Positives = 124/266 (46%), Gaps = 31/266 (11%) Query: 3 IYLVGGAVRDALLGLPVKDRDWV----------VVGSTPQEMLDAGYQQVGRDFPVFLHP 52 IY+VGGAVRD LLG+ V D D + S + D G + + P Sbjct: 13 IYIVGGAVRDRLLGIDVVDIDIASAIHPYDFKDLSKSLGYKTFDTGIEHGTVTVLIDGKP 72 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 H + RT+ S G ++ T+E+DL RRD TINA+A +IIDP+NG Sbjct: 73 YEHTTF---RTD-VSCDGRNANVSFSK---TIEEDLSRRDFTINAIALL-GKKIIDPFNG 124 Query: 113 LGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 DL+N++L+ V A F ED LR++R ARFA+R L I + L +E+ Sbjct: 125 QNDLKNKILKTVGTAEERFSEDYLRIIRAARFASR---LKMSIDTDLLIAAKELA-PKIT 180 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 +H++ ER+ E + A + + F +VL L VLF D+ A W E+ Sbjct: 181 QHVSVERISDEFKKA--QGHAEEFLKVLYSMNILDVLF---DSTKDHYANELWWEEVGRA 235 Query: 230 IHTLMTLSMAAMLSPQVDV-RFATLC 254 AA++ P D + ++C Sbjct: 236 AQYDGETYFAALVRPSGDKNKVESIC 261 >UniRef50_C3WFG0 Poly(A) polymerase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WFG0_FUSMR Length = 446 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 88/317 (27%), Positives = 147/317 (46%), Gaps = 30/317 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLD--AGY--QQVGRDFPVFLHPQTHEEYA 59 Y+VGG VRDALLGL KD D+ V +++L+ + Y +++G+ F + Y Sbjct: 23 YIVGGYVRDALLGLEPKDCDF-VTDIEYEKLLNIFSEYSPKEIGKHFGIIQIKIDGVHYE 81 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 +A+ + G + +DLKRRD TINA+A D + D++++ Sbjct: 82 IAKMRQDKGIPKDRKEQEIEFTKNIYEDLKRRDFTINAIAFDGEKFYYGDSDSQKDIESK 141 Query: 120 LLRHVSPA---FGEDPLRVLRVARFAAR--YAHLGFRIADETLALMREMTHAGELEHLTP 174 LR V EDPLR+LR RF A HL + E ++ RE+ L++L+ Sbjct: 142 TLRFVGECKKRIEEDPLRILRYFRFLATKDLKHLDEDV--EEISKYREL-----LQNLSV 194 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ +E + +T +N ++L D L ++ PE G H I+T+ Sbjct: 195 ERIREEFDKIITGKNTYNILKILSDKKILEIIIPEWKECRGFNQRNIHH------IYTVD 248 Query: 235 TLSMAAMLSPQVDV--RFATLCHDLG--KGLTPPELWPRH-HGHGPAGVKLVEQLCQRLR 289 + A+ +D+ R A HD+G K + E H + H ++ +++ RLR Sbjct: 249 EHILQALKETDMDLITRLAIFFHDIGKPKCFSLGEDGKGHFYNHELISAEMAKEIMGRLR 308 Query: 290 V-PNEIRDLARLVAEFH 305 N I + R++ ++H Sbjct: 309 YDKNSIEKVYRII-QYH 324 >UniRef50_C4LGI1 tRNA nucleotidyltransferase n=3 Tax=Corynebacterium RepID=C4LGI1_CORK4 Length = 511 Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 97/336 (28%), Positives = 154/336 (45%), Gaps = 44/336 (13%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQE---MLDAGYQQV---GRDFPVFLHPQTHE 56 +YLVGG+VRDALLG D D+ + P + +L++ V G D+ ++ + Sbjct: 65 LYLVGGSVRDALLGRLSSDLDF-TTNARPHDIHRLLESTCDAVWDTGIDYGTVSGQRSGQ 123 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVT----LEDDLKRRDLTINALAQDDNGE----IID 108 + + + G + P+VT L+ DL RRD T+NA+A + G+ D Sbjct: 124 DIEVTTFRADTYDGES-----RNPEVTFGDSLDKDLTRRDFTVNAMAVEVRGDGSQVFHD 178 Query: 109 PYNGLGDL-QNRLLRHVSPA--FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 P +GL DL + L PA F +DPLR+LR RF ++ LG R+A M M Sbjct: 179 PLHGLTDLVRGYLDTPDDPAISFHDDPLRMLRACRFVSQ---LGLRVAPRVREAMERM-- 233 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 AG+++ +T ER+ E + + +P +++ D G + PEI A+ H Sbjct: 234 AGDIQRITAERIHAELDKLILGDHPTDGIELMVDTGLADYIIPEIPAMRMTRDEHMQHK- 292 Query: 226 IDTGIHTLMTLSMAAML---SPQVDVRFATLCHDLGKGLTPPELWPRHHG------HGPA 276 D H+L L A P + +R+A L HD GK P P+ G H Sbjct: 293 -DVYAHSLQVLRQAIDREPDGPDLVLRWAALLHDCGK---PSTRAPKPGGGVTFYHHDVV 348 Query: 277 GVKLVEQLCQRLRVPNE-IRDLARLVAEFHDLIHTF 311 G K+ + + L+ + I+D++ L+ H H + Sbjct: 349 GAKMARKRFRALKYSKQFIKDVSGLIY-LHQRFHGY 383 >UniRef50_Q1IQB2 Polynucleotide adenylyltransferase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQB2_ACIBL Length = 567 Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 20/221 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--------GYQQVGRDFPVFLHP 52 M IYL GGA+RD L G P++D D V G+ + D G ++ + + L Sbjct: 32 MNIYLTGGALRDLLTGFPIRDIDLTVQGNPFKLQKDLEKAGAAVHGTEEDSKTLHLLLPG 91 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIID 108 E +++R+ G A T+ +DL+RRD T+NA+A N G + D Sbjct: 92 NVRVEVSMSRSATYEKPGKPPKVEPA----TINEDLRRRDFTVNAMALSLNPGSKGLLAD 147 Query: 109 PYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 P+NG+ D++ ++LR + + AF E+P R+LR RFAAR+ + + + T A Sbjct: 148 PFNGVADIELKVLRILHNYAFYEEPSRLLRAVRFAARF---HWPLEERTQARYDAAKENS 204 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFP 208 +E++ + V E E NP + + G L+VL P Sbjct: 205 YIEYINKDAVGYELEQVAREDNPIEIVRAMEKEGWLKVLHP 245 >UniRef50_C1TKY8 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKY8_9BACT Length = 397 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 73/233 (31%), Positives = 117/233 (50%), Gaps = 34/233 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQVGRDFPVFLHPQTHEEY 58 + ++LVGGAVRDA LGL D D VV P E + A G +G + + + + +E+ Sbjct: 16 LSVWLVGGAVRDAALGLAPGDLDLVV--DLPMEEIAAICGGAVIGPE-GMQVCITSCDEF 72 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + + GS +E DL RD T+NA+A ++G ++DP++G+ DL++ Sbjct: 73 VMEVCPLQGGS--------------IEKDLSVRDFTVNAMALTEDGTLVDPFDGMEDLRS 118 Query: 119 RLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREM--THAGELEHLT 173 +LR V S EDP+R LR+ R A + LG + ++L +R T +E L+ Sbjct: 119 MVLRFVGDPSERLAEDPIRALRMCRLA---SSLGLTPSVDSLKAVRNFVATRQDRIEALS 175 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEID-----ALFGVPAPAK 221 RV KE L P + + D G +R+L P +D ++F V A ++ Sbjct: 176 RPRVGKEMVVGLV--RPVKYLSTMMDVGLVRLLMPSLDHGLALSVFSVLAESR 226 >UniRef50_D1B359 Polynucleotide adenylyltransferase region n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B359_SULD5 Length = 375 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 99/190 (52%), Gaps = 17/190 (8%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQE----MLDAGYQQVGRDFPVFLHPQTHEEYA 59 YLVGG+VRD + P+ D D V P+ M G VG+ F F++ + +++ Sbjct: 30 YLVGGSVRDICVDEPLHDLDIEVYDIAPETFDNLMQRIGAVGVGKSF--FVYKWGNIDFS 87 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQN 118 L R ERKSG G+ F D ++ KRRD TINA+ + E++D ++G + + Sbjct: 88 LPRIERKSGVGHNAFEVEVCEDE--KEASKRRDFTINAMMLNIFTYELLDFWDGQKAILD 145 Query: 119 RLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 RLL + F ED LRVLR +F+AR LGF+I ++L +MRE+ L LT R+ Sbjct: 146 RLLVIIDEEKFKEDSLRVLRAMQFSAR---LGFKIESKSLMIMREIA----LSDLTKPRI 198 Query: 178 WKETESALTT 187 E E Sbjct: 199 LWEFEKLFNA 208 >UniRef50_Q3A9F0 PolyA polymerase/tRNA nucleotidyltransferase family protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A9F0_CARHZ Length = 441 Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 82/275 (29%), Positives = 121/275 (44%), Gaps = 31/275 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDF-PVFLHPQTHEEYAL 60 K Y VGG+VRD LL PVKD D P+E+ + + G +F P+ EE + Sbjct: 15 KTYFVGGSVRDMLLSRPVKDVDLATF-QKPREVGEKLLKAFGGNFFPL------KEELLI 67 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG----EIIDPYNGLGDL 116 R K G +LE+DL+RRD T+NALA NG E+ID + G DL Sbjct: 68 YRLVFKDGGETYQVDILPVFGESLEEDLRRRDFTVNALALPVNGEFPREVIDLFGGRNDL 127 Query: 117 QNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 Q R++R +S EDP+R+LR R A LGF + ET+ + ++ ++ + E Sbjct: 128 QARIIRMISAENILEDPVRILRGIRLA---GELGFAVEQETMVVFKQYIQY--IKKMPGE 182 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 RV +E + T + +L G V + G +H H + T Sbjct: 183 RVAEELKKIFTLKPAVPMVDMLFHTGFFEVF--NLGLKEGYELYQNYHHSETVYRHLIDT 240 Query: 236 LS-MAAMLS----------PQVDVRFATLCHDLGK 259 L+ M +L P ++ HD+GK Sbjct: 241 LNRMEELLEDNPLGIRSDYPPYLLKMVAFFHDIGK 275 >UniRef50_Q39TB4 Polynucleotide adenylyltransferase region n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TB4_GEOMG Length = 431 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 103/210 (49%), Gaps = 14/210 (6%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 ++ Y+VGG +RD L+G V D D + VG P+ + ++ G F + H Sbjct: 26 LQCYVVGGCLRDLLMGRGVNDVD-IAVGGGPEALSRRFAKECGGTFFWLDQERGH----- 79 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG--EIIDPYNGLGDLQN 118 +R K G+G F + DL RD TIN+LA G E+ DP G D++ Sbjct: 80 SRVVIKGGAGIDTFDFAPLRGEDICADLALRDFTINSLAVPLQGGVELFDPLKGETDIRA 139 Query: 119 RLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +L+R + + F +DPLR++R RFA A LGFRI ETLA + THA + + ER+ Sbjct: 140 QLVRRCAESVFRDDPLRLVRAFRFA---ATLGFRIETETLAAI--TTHAPLIANSAGERI 194 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLF 207 E L F+ + D G L VLF Sbjct: 195 RDELFQVLCMPGTGSVFRTMGDAGLLCVLF 224 >UniRef50_Q4K5Y6 Poly(A) polymerase n=49 Tax=cellular organisms RepID=Q4K5Y6_PSEF5 Length = 555 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 104/368 (28%), Positives = 159/368 (43%), Gaps = 78/368 (21%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ---VGRDFPVF--------- 49 + YLVGG VRD LL + KD D V +TP E + A ++ +GR F + Sbjct: 147 QAYLVGGCVRDMLLNITPKDFD-VATSATP-EQVKAEFRNARIIGRRFKLVHIHFGREII 204 Query: 50 -------LHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD 102 HPQ ++ ++ R Y TLE+D +RRD TINAL D Sbjct: 205 EVATFRANHPQNEDDEDSNQSSRNESGRILRDNVYG----TLEEDAQRRDFTINALYYDP 260 Query: 103 NGE-IIDPYNGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLA 158 E I+D NG+ D++N L+R + + EDP+R+LR RFAA+ L F I T A Sbjct: 261 VSERILDYANGVHDIRNNLIRLIGDPRQRYQEDPVRMLRAVRFAAK---LNFGIEKHTAA 317 Query: 159 LMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFP-EIDALFGVP 217 +RE+ A L + R+++E + F++L D LFP +AL Sbjct: 318 PIREL--APMLREIPSARLFEEVLKLFLSGYAADTFEMLVDLQLFDPLFPASAEAL---- 371 Query: 218 APAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP-----PELWP---- 268 +++P T HTL++ ++ D+R K +TP LWP Sbjct: 372 ---EYNP---TYTHTLISEALV-----NTDLRIKQ-----NKPVTPAFLFAALLWPALPA 415 Query: 269 -----RHHGHGP------AGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPK 317 + G P A +L+ + CQR+ +P + + E D+ P + K Sbjct: 416 RVLRLQERGMPPIPAMQEAAHELIAEQCQRIAIP---KRFTMPIREIWDMQERLPRRSGK 472 Query: 318 TIVKLFDS 325 +L D+ Sbjct: 473 RADQLLDN 480 >UniRef50_C0EC94 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC94_9CLOT Length = 449 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 102/321 (31%), Positives = 146/321 (45%), Gaps = 36/321 (11%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLD--AGYQQVGRDFPVFLHPQTHEEYALA 61 Y+VGG VRD LLG D D + + P E + AGY + + L Sbjct: 24 YIVGGCVRDLLLGWEPDDYD-ITTSALPFETMRCFAGYHIIETGVKHGTVTAVIDGMPLE 82 Query: 62 RTERKSGSGYTGFTCYAAPDV-----TLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 T + Y+ PD +L +DL RRD TINA+A + + D + G DL Sbjct: 83 ITTYRIDGQYSD---NRRPDSVTFTRSLREDLARRDFTINAMAYSPSNGLQDYFGGQQDL 139 Query: 117 QNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +++++R V F ED LR+LR RF++ LGF + T A + +T G L H+ Sbjct: 140 KDQMIRCVGDPQTRFEEDALRILRAVRFSSV---LGFGMEPTTAAAL--LTRRGLLVHIA 194 Query: 174 PERVWKETESALTTRNPQVFFQVLRD-CGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ERV E L R+ +VLR+ L + PEI G +++H D HT Sbjct: 195 RERVQVELNKLLLGRD---VGRVLREYTEVLCEVIPEIIPCIGFEQHSRYHL-YDVWEHT 250 Query: 233 LMTLSMAAMLSPQ-VDVRFATLCHDLGKGLT-PPELWPRH-HGHGPAGVKLVEQLCQRLR 289 + T+ SP+ + VR A L HDL K LT E H + H L +++ +RLR Sbjct: 251 VHTVER----SPERLTVRLAMLLHDLAKPLTFSIEGGTGHFYSHQQKSADLAQEILKRLR 306 Query: 290 VPNEI-RDLARLV----AEFH 305 EI R + L+ EFH Sbjct: 307 YSGEITRRVVNLIRYHSVEFH 327 >UniRef50_B4UMC4 Poly(A) polymerase n=4 Tax=Anaeromyxobacter RepID=B4UMC4_ANASK Length = 556 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 82/229 (35%), Positives = 106/229 (46%), Gaps = 27/229 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFP---VFLHPQTHE 56 + YLVGG VRD LLG KD D V + P E+ + + +GR F V+ Sbjct: 70 QAYLVGGCVRDLLLGATPKDFD-VATDAHPGEVRAIFRNCRLIGRRFRLAHVYFRAGKVI 128 Query: 57 EYALARTERKSGSGYTGFTCYAAPDV---------TLEDDLKRRDLTINALAQD-DNGEI 106 E A T RK+ + D+ T E+D RRD T+N L D GE+ Sbjct: 129 EVA---TFRKNPTDVAEDVGEGEGDLLITRDNVFGTAEEDSVRRDFTVNGLFYDVATGEV 185 Query: 107 IDPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREM 163 ID G DL+ + + EDP+R LR RFAAR LGF IA +T MR Sbjct: 186 IDYVGGRADLEAHRISTIGDPEIRMREDPVRALRAVRFAAR---LGFTIAPDTFEAMRRT 242 Query: 164 THAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDA 212 + GEL P RV +ET L F++LR CGAL V+ P + A Sbjct: 243 S--GELARCAPARVLEETFKLLRCGGSARAFELLRACGALPVILPALGA 289 >UniRef50_Q1JYT1 Polynucleotide adenylyltransferase region n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JYT1_DESAC Length = 422 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 73/222 (32%), Positives = 107/222 (48%), Gaps = 15/222 (6%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 + IY+VGGA+RDALLG +D D + G QQ G F + ++ Sbjct: 23 LPIYVVGGALRDALLGHACQDIDLITPGDPTPIAQAFSKQQSGHWFWL------DQQRLY 76 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ--DDNGEIIDPYNGLGDLQN 118 +R G+ + TL++DL+ RD TINA+A DD + +DP +G DL+N Sbjct: 77 SRVIVNEGNTALQYDFAPFRADTLDEDLRLRDFTINAIACSVDDLTQWVDPLSGQSDLEN 136 Query: 119 RLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 RLLR S +F +DPLR+L+ R A++ G I T + A +L H+ ER+ Sbjct: 137 RLLRECSEQSFSDDPLRMLKGLRHCAQF---GLSIDQTTWQHCQ--NEAPQLVHVAGERI 191 Query: 178 WKETESALTTRNPQVFFQVLRDCG-ALRVLFPEIDALFGVPA 218 +E L +PQ + G A V FPE+D P+ Sbjct: 192 RQELAVLLAQPSPQHALHLFHQSGLAQAVGFPELDNDRNFPS 233 >UniRef50_C9R7Y1 CBS domain containing protein n=1 Tax=Ammonifex degensii KC4 RepID=C9R7Y1_AMMDK Length = 769 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 73/217 (33%), Positives = 108/217 (49%), Gaps = 14/217 (6%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEE-YA 59 M+IYLVG +VRD LLG R+ +V ++ Y+++G+ V EE + Sbjct: 477 MEIYLVGESVRDLLLG-----RERLVYHLAADGEVEKLYEELGKSAQVEDGRLCLEERFC 531 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDPYNGLGD 115 + K T P+ L +L ++D TI+ALA G +ID + G D Sbjct: 532 FYLRQLKPSFLEYDATGNPLPNSLLRQELYQQDFTIDALAIALTPHRFGVLIDFFGGQND 591 Query: 116 LQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 L+N LLR + S +F E+PLR+LR+ R AA L F I ET +RE G+LE + Sbjct: 592 LKNGLLRVLHSYSFRENPLRILRILRLAA---ELNFLIERETARFLREALREGKLEQVPG 648 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEID 211 E++W+E + L N +F L + G LFP +D Sbjct: 649 EKLWEEIKLGLEGPNVPLFLSRLAEMGVWPRLFPGLD 685 >UniRef50_UPI0001C421DE tRNA CCA-pyrophosphorylase n=1 Tax=Bacillus pseudofirmus OF4 RepID=UPI0001C421DE Length = 389 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 74/243 (30%), Positives = 116/243 (47%), Gaps = 31/243 (12%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALART 63 Y+VGGAVRD L P+ D D +V +TP+E+ + F H+ + Sbjct: 32 YIVGGAVRDLLCKRPITDID-IVTEATPEEISTVFSK-------TFSMNNQHQTVIV--- 80 Query: 64 ERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRH 123 R SG F ++E+DL RD TIN++A D G++ DP +G D++N+++R Sbjct: 81 -RHSGCL---FEVTTQRGKSIEEDLLMRDFTINSIALDKKGQLFDPLDGQSDIKNQVIRS 136 Query: 124 VSPA--FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKET 181 +PA EDPLR+LR RF+ + LGF++A+ ++R A L + ER+ KE Sbjct: 137 HNPAARMSEDPLRMLRAYRFS---SDLGFKVAENLGEIIR--YQAETLSRVAMERISKEF 191 Query: 182 ESALTTRNPQVFFQVL------RDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 ++ + L + CG ++ ID L +P E+ I T + Sbjct: 192 YKLVSGPFKHTALKELASSGLYKHCGLPQLDKKAIDFLRELPVLKNEKEEV---IWTFIC 248 Query: 236 LSM 238 LSM Sbjct: 249 LSM 251 >UniRef50_D1VN96 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Frankia sp. EuI1c RepID=D1VN96_9ACTO Length = 517 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 79/244 (32%), Positives = 109/244 (44%), Gaps = 27/244 (11%) Query: 83 TLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRV 138 +LE DL RRD T+NA+A + E +D + G+ DL +LR P + +DPLR+LR Sbjct: 155 SLEADLLRRDFTVNAMAVSVPDHEFVDLFGGMADLARGVLRTPGPPEVSLDDDPLRILRA 214 Query: 139 ARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLR 198 RF A+ LG E + MR L + PERV E + + +P Q L Sbjct: 215 IRFEAK---LGLTPTPELVEAMR--ARVDRLRIVAPERVRDELRKLIVSADPDRGLQRLV 269 Query: 199 DCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAML---SPQVDVRFATLCH 255 D GA V+ PE+ AL H ++ T HTL L A L P +R+A L H Sbjct: 270 DVGAAAVVLPELPALRMEIDEHHQHKDVYT--HTLTVLRQAIELEDDGPDEVLRWAALLH 327 Query: 256 DLGKGLTPPELWPRH--------HGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDL 307 D+GK T RH H H G + + LR P ++ D L+ H Sbjct: 328 DIGKPRT-----RRHAAGGGVSFHHHEVVGRDMTRKRLAALRFPKDVGDSITLLVFLHLR 382 Query: 308 IHTF 311 H + Sbjct: 383 FHGY 386 >UniRef50_C6CUG0 Polynucleotide adenylyltransferase region n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CUG0_PAESJ Length = 417 Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 104/210 (49%), Gaps = 21/210 (10%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT----HEEYAL 60 VGG VRD +GLP+KD D + + P++++ R P L T H+ + Sbjct: 30 FVGGCVRDTAMGLPIKDVD-IATSARPEQVMSI----FPRCIPTGLQHGTVTVLHDGGSY 84 Query: 61 ARTERKSGSGYTGFTCYAAPDVT--LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 T ++ S Y + L+ DL RRDLTINA+A + GE+ DP+ GL DL+N Sbjct: 85 EVTTFRTESEYEKHRRPLQVEFIDRLDGDLLRRDLTINAMAMNAAGELYDPFRGLNDLKN 144 Query: 119 RLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETL-ALMREMTHAGELEHLTP 174 R +R V A F ED LR+LR RFA+++ F IA T AL+R H L H+ Sbjct: 145 RTIRCVGDADARFQEDALRMLRTIRFASQFE---FTIAHTTWRALVR---HRELLRHIAM 198 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALR 204 ERV E + + +P +L LR Sbjct: 199 ERVHAELDRMIGGAHPGRALHLLAASKLLR 228 >UniRef50_Q1YQK0 Poly(A) polymerase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQK0_9GAMM Length = 453 Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 75/234 (32%), Positives = 113/234 (48%), Gaps = 27/234 (11%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLHPQTHEEYALA 61 Y+VGG VRD L+GL KD D V + P E+ + + +GR F + +H Q E Sbjct: 55 YVVGGCVRDLLIGLKPKDFD-VATSAKPWEVKELFRRSRIIGRRFQI-VHVQFSREIIEV 112 Query: 62 RTERKSGSGYTGFTCYAAPDV----------TLEDDLKRRDLTINALAQD-DNGEIIDPY 110 T R + S T D T+E+D RRDLT+NAL D I D Sbjct: 113 TTFRSNSSQSTSKNRRQQTDSGMLTRDNVFGTVEEDASRRDLTVNALYYDPSTNSIHDFT 172 Query: 111 NGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 NG+ D+ +++R + F EDP+R+LRVARFAA+ LGF I T M+ A Sbjct: 173 NGIDDVDAKIIRIIGDPETRFREDPVRLLRVARFAAK---LGFNIEPATANPMKH--RAA 227 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALF----GVP 217 +L+ ++P R++ ET + F++L + + P++ + G+P Sbjct: 228 DLQQVSPPRLFDETLKLFMSGQGLDTFKILVEHRLFDYIVPQLGPMLNDRQGIP 281 >UniRef50_C0GDZ3 CBS domain containing protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDZ3_9FIRM Length = 873 Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 99/201 (49%), Gaps = 26/201 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +K++ VGG +RD LL + D D VV + + GR +HE++ Sbjct: 473 VKVFAVGGFIRDLLLNIKNHDLDLVVEPAAIPFAEELNKMLGGR-------LTSHEKFGT 525 Query: 61 ARTERKSGSGYTGFTC----YAAP-------DVTLEDDLKRRDLTINALAQDDN----GE 105 A G T YA P +L++DL RRD TIN LA N G+ Sbjct: 526 ASIVLPEGIHIDLVTSRQEFYARPAALPEVEQSSLKNDLFRRDFTINTLACSLNSPGFGK 585 Query: 106 IIDPYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 +ID +NG+GDL+ L+R + + +F EDPLRVLR RF R+ GFR+ + TL+LM Sbjct: 586 LIDLFNGIGDLEKGLIRVLYNLSFVEDPLRVLRAIRFEQRF---GFRLEETTLSLMENAA 642 Query: 165 HAGELEHLTPERVWKETESAL 185 LE ++ ER+ E AL Sbjct: 643 QTRVLEKVSKERLHDELVLAL 663 >UniRef50_Q0AVZ3 tRNA nucleotidyltransferase (CCA-adding enzyme) n=2 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVZ3_SYNWW Length = 437 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 95/359 (26%), Positives = 164/359 (45%), Gaps = 41/359 (11%) Query: 4 YLVGGAVRDALLGL-PVKDRDW-VVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 Y+ G +RD LLG P+ +W + + P + + G F + E+Y + Sbjct: 24 YIYGACIRDYLLGKEPI---NWDITTNALPNNTVVIFDENEG-----FTSIPSVEDYGIV 75 Query: 62 RTERKSGSGY-----TGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 K S TG A D++ +DL +D T+N++A ++ I+DPYNG+GD+ Sbjct: 76 TLHFKGESCQVNTFRTGEARRFADDIS--EDLLHKDFTMNSIAYNEQAGIVDPYNGVGDI 133 Query: 117 QNRLLRHVSPAF---GEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + RL+R + ED R+LR RF ++ LGF+I E L M+++ + + Sbjct: 134 EKRLIRCAQNPYEQMQEDSARILRAVRFESQ---LGFKIEAELLQAMKDLK---DTVPAS 187 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 RV E L + P + L + G L L PE+ G + +H + D H+L Sbjct: 188 GSRVRNEFIQLLLSEQPSRSIRRLLELGLLERLIPELMPAIGFDTHSSYHDK-DVFEHSL 246 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGK--GLTPPELWPRH-HGHGPAGVKLVEQLCQRLRV 290 + L P + +R A L HD+ K LT E H +GH G ++ + + RL Sbjct: 247 VVLDNT---EPNLTLRLAALLHDIDKPNCLTIDEDGEGHCYGHASGGSEMAQAILGRLNF 303 Query: 291 PNE-IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 + I+ ++ L+ E ++ F ++ +I +L + P +++L AD++G Sbjct: 304 DRKTIQAVSSLIKEH---MNDFGNISDLSIKRLIRRV----GPDNIDRLFELQLADIKG 355 >UniRef50_B9CKT6 Cca-adding enzyme n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKT6_9ACTN Length = 473 Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 95/322 (29%), Positives = 142/322 (44%), Gaps = 30/322 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVG---STPQEMLDAGY--QQVG-RDFPVFLHPQTHE- 56 ++VGG VRDALLG D D T + AGY + G + V + H Sbjct: 42 WIVGGWVRDALLGSATHDIDITTSAHWEQTAETYRAAGYVVHETGIKHGTVTVVVNGHPL 101 Query: 57 EYALARTE-RKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 E RTE S + C+ +++ DL RRD T+NA+A ++DPY+G D Sbjct: 102 EITTYRTEGTYSDHRHPDEVCFVD---SIDKDLARRDFTVNAMAFHPRRGLLDPYHGQYD 158 Query: 116 LQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 LQ R +R V A F ED LRVLR RFA + LGF I +T + A L + Sbjct: 159 LQQRCIRAVGDAQSRFEEDALRVLRAIRFACK---LGFSIEKKTADALS--ASASRLAFV 213 Query: 173 TPERVWKETESALTTRNPQVFFQVLR-DCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ER+ E + + + V + LR + PE+ A+ G +++H D H Sbjct: 214 AQERIGNEMCAIM---DAGVMARALRIGFAGVAAAVPELAAMEGFDQQSQYHA-YDVCEH 269 Query: 232 TLMTLSMAAMLS---PQVDVRFATLCHDLGKGLTPPE-LWPRHH--GHGPAGVKLVEQLC 285 T + S +R+A L HD+ K T E + R H GH ++ + + Sbjct: 270 TARVCAGVEAFSAGRASCALRWAALLHDVAKPKTFSEDVSHRGHFFGHPEVSAQMAQTIL 329 Query: 286 QRLRVPNEIRDLARLVAEFHDL 307 + + +P + A + +HDL Sbjct: 330 ESMAIPQSVVRQAIQLIRWHDL 351 >UniRef50_Q6MBL7 Putative Poly(A) polymerase n=2 Tax=Parachlamydiaceae RepID=Q6MBL7_PARUW Length = 424 Score = 87.8 bits (216), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 109/221 (49%), Gaps = 21/221 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHEEYA 59 YLVGG+VRD LL KD D + S E + A +Q+ +GR F + H + + Sbjct: 37 YLVGGSVRDLLLKRVPKDFD--ISTSARPEQIKAIFQRQCILIGRRFRL-AHIRFGHKII 93 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQN 118 T R +G +G + T E+D+ RRD TIN L D N IID NG D+Q Sbjct: 94 EVSTFR-TGENDSGLILHDNEWGTPEEDVLRRDFTINGLFYDSSNHSIIDYVNGWEDVQK 152 Query: 119 RLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE--HLT 173 LLR + F +DP+R+LR+ +F ARY F+I ++T + H +E + Sbjct: 153 HLLRTIGEPEKRFKQDPVRLLRLLKFHARY---NFKIEEQT----EQAIHVCRIEITKSS 205 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALF 214 P R+ +E L + F ++L + G L +LFP + L Sbjct: 206 PARILEEILRMLESGASAPFIKLLAEYGILNILFPSLTQLL 246 >UniRef50_Q8EQD6 CCA-adding enzyme n=1 Tax=Oceanobacillus iheyensis RepID=CCA_OCEIH Length = 400 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 65/184 (35%), Positives = 97/184 (52%), Gaps = 21/184 (11%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLHPQTHEEYALA 61 Y VGG VRD LL + D D + +TP E++ + VG + + E Y + Sbjct: 24 YFVGGCVRDLLLQKDIHDID-IATSATPNEVMHLFKKVIPVGIEHGTVIVRHGGESYEVT 82 Query: 62 RTERKSGSGYTGFTCYAAPD-----VTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 T R+ G +T + P+ L +DL+RRD TINALA D +G+I D ++G DL Sbjct: 83 -TYRQDGE----YTDHRRPNDVRFVTNLAEDLRRRDFTINALAMDTSGQITDLFHGQDDL 137 Query: 117 QNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + +L+R V A F ED LR+LR RF+++ LG I ++TL M +++HL Sbjct: 138 KKKLIRTVGNAEERFTEDALRILRAVRFSSQ---LGCTIQEDTLEAM--FVIRKQIQHLA 192 Query: 174 PERV 177 ER+ Sbjct: 193 VERI 196 >UniRef50_C9L4X1 tRNA nucleotidyltransferase/poly(A) polymerase family protein n=2 Tax=Clostridiales RepID=C9L4X1_RUMHA Length = 415 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 38/229 (16%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-------LDAGYQQVGRDFPVFLHPQTHE 56 Y VGG VRD+LL D D + + P E+ +D G Q V + + E Sbjct: 24 YAVGGCVRDSLLFRSPADWD-ITTSAKPLEVKEIFKRTVDTGLQH--GTVTVLIEKEGFE 80 Query: 57 --------EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIID 108 EY +R ++ +TG LE+DLKRRD TINA+A +D ++D Sbjct: 81 VTTYRIDGEYEDSRHPKEVI--FTG---------NLEEDLKRRDFTINAMAYNDAVGLVD 129 Query: 109 PYNGLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 + G DLQ++++R V F ED LR+LR RF+ A LGF I ++T + + Sbjct: 130 VFGGRQDLQDKIVRCVGNPQERFTEDALRILRAVRFS---AQLGFSIEEKTKEAAKVL-- 184 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALF 214 A L++++ ER+ E L ++NP + + + G +++ PE D L Sbjct: 185 APTLKNISAERIQTELLKLLVSKNPH-YLKTAWELGITKIVLPEFDVLM 232 >UniRef50_C2E651 tRNA CCA-pyrophosphorylase n=1 Tax=Lactobacillus johnsonii ATCC 33200 RepID=C2E651_LACJO Length = 407 Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 99/206 (48%), Gaps = 17/206 (8%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALART 63 Y VGG+VRD LL + D D + + P E+ + V +E + T Sbjct: 37 YFVGGSVRDLLLNRHIHDVD-IATSAYPMEIKQIFKKTVDTGIKHGTVTVLYEGESYEIT 95 Query: 64 ERKSGSGYTGFTCYAAPD-VT----LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 ++ SGY F PD VT L +DLKRRD TINALA D +G IID ++GLGDL+ Sbjct: 96 TFRTESGYQDFR---RPDHVTFVQNLSEDLKRRDFTINALAMDVDGNIIDHFDGLGDLEK 152 Query: 119 RLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 L+R V A F ED LR++R RF ++ L F + ET + + L ++ E Sbjct: 153 HLIRAVGKAENRFHEDALRMMRAVRFMSQ---LQFTLEPETEQAISDNHEL--LSKISVE 207 Query: 176 RVWKETESALTTRNPQVFFQVLRDCG 201 R+ E Q FQ+ D G Sbjct: 208 RIRDEFVKMGIALGSQKAFQIFLDTG 233 >UniRef50_Q9KC89 CCA-adding enzyme n=1 Tax=Bacillus halodurans RepID=CCA_BACHD Length = 375 Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 75/212 (35%), Positives = 105/212 (49%), Gaps = 32/212 (15%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVF-LHPQTHEEYAL 60 Y+VGGAVRD +G KD D VV ++P+E+ L Q+ R F +H Q + A+ Sbjct: 23 YIVGGAVRDYHIGRKPKDVD-VVTSASPEEIRTLYPHAFQINRQFQTLTVHLQ---KVAI 78 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 + + GS +EDDL RD TINA+A NG+IIDP G DL+N + Sbjct: 79 EVSTLRGGS--------------IEDDLCSRDFTINAMALAMNGDIIDPTGGKTDLENGV 124 Query: 121 LRHVSPA--FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 +R P F EDPLR+LR RFA + LGF +A T ++ L + ERV Sbjct: 125 IRSFHPEARFKEDPLRMLRAPRFA---SELGFTVAKGTAEAIK--GSCSLLADVAVERVE 179 Query: 179 KETESALTTRNPQVFFQVLRDCGALRVLFPEI 210 KE + + + +L + G L+P I Sbjct: 180 KELTQLMIGTHRSSGWCLLHETG----LYPFI 207 >UniRef50_B5ES11 Poly(A) polymerase n=8 Tax=Proteobacteria RepID=B5ES11_ACIF5 Length = 497 Score = 87.4 bits (215), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 77/230 (33%), Positives = 110/230 (47%), Gaps = 23/230 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQE---MLDAGYQQVGRDFPVFLHPQTHEE 57 + YLVGG+VRD LLG KD D V + P++ + + +GR F + +H Q E Sbjct: 66 FQAYLVGGSVRDLLLGREPKDFD-VATDAHPEQVRKLFRRNARLIGRRF-ILVHVQFGNE 123 Query: 58 YALARTERKSGSGY---------TGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEII 107 T R S +G TG +LE+D +RRD T NAL + + I+ Sbjct: 124 IIEVATFRGSANGKEDESSEHSETGRILADNVYGSLEEDARRRDFTANALYYNIADRSIL 183 Query: 108 DPYNGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 D G+ DLQ LR + + EDP+R+LR RFAA+ LGF + A + Sbjct: 184 DFSTGMEDLQAGRLRVIGDPEQRYREDPVRMLRAVRFAAK---LGFTLDAAAQAPIAACR 240 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALF 214 L+ + R+++ET T N Q F+ LR G LFP++DAL Sbjct: 241 KL--LQEVPSARLFEETLKLFLTGNAQTSFEHLRQMGLFAALFPQVDALL 288 >UniRef50_C8WIX9 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WIX9_EGGLE Length = 465 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 101/351 (28%), Positives = 147/351 (41%), Gaps = 43/351 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHE---- 56 + ++VGG VRDALLG P D D A +Q V R F + +THE Sbjct: 31 FETWIVGGYVRDALLGRPSSDIDIAT---------QAHWQDVQRVFEGQGY-RTHETGTA 80 Query: 57 ---------EYALARTERKSGSGYTG--FTCYAAPDVTLEDDLKRRDLTINALAQDDNGE 105 E AL T +S Y + T+ +DL RRD T+NALA Sbjct: 81 HGTLTVIVDEQALEVTTYRSDGAYADARHPNQVSFVRTIAEDLARRDFTMNALAYHPARG 140 Query: 106 IIDPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMRE 162 + DPY G DL+ +++R V F ED LR+LR RFA A LGF I T M Sbjct: 141 LFDPYGGHADLEAQIIRAVGDPDRRFSEDALRMLRACRFA---AELGFAIDPNTFEGM-- 195 Query: 163 MTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKW 222 + + G L ++ +R+ E + L + D L + PE+ A+ G + Sbjct: 196 LANKGLLPRISTQRITHELQRLLLGEHAGRALTATVDV--LAAVLPELVAMKGFEQRTPY 253 Query: 223 HPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVK 279 H D HT L + P VR+A L HD+GK T + +GH V Sbjct: 254 HI-YDVLEHTARVLD---GVPPYPLVRWAALFHDMGKPAAFFTDEDGTGHFYGHAAISVM 309 Query: 280 LVEQLCQRLRVPNEIRDLARLVAEFH-DLIHTFPMLNPKTIVKLFDSIDAW 329 L + RL + + + E H D+I P + + +L +++ + Sbjct: 310 LARGIMDRLALSSAFAAQVLTLVERHDDVIDRTPKAVKRALSRLGGNVELF 360 >UniRef50_C5NYM2 CCA-adding enzyme n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYM2_9BACL Length = 386 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 51/269 (18%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-------LDAGYQQ------VGRDFPVFL 50 Y VGG VRD LLG D D + + P ++ +D G Q V D Sbjct: 28 YFVGGCVRDYLLGEDFSDID-ITTNALPDQVKKVFRKSIDTGIQHGTVTILVNGDSYEVT 86 Query: 51 HPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPY 110 +T E+YA R+ K F L +DL RRD TINA+A D NG++ D + Sbjct: 87 TFRTEEDYANHRSPEK-----VEFVS------NLREDLDRRDFTINAMALDYNGKLFDYH 135 Query: 111 NGLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 NG DL ++++R V + F ED LR+LR RF+++ LGF I + TL +++ +A Sbjct: 136 NGDSDLSSKIIRTVNNPNERFYEDALRMLRAFRFSSK---LGFEIENNTLNAIKK--NAE 190 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 ++ ++ ER+ E + L + G LR L +D+ + P + E++ Sbjct: 191 LIKFVSIERIVNEFKKLLAGK------------GNLRSLELLLDSKLNLYIP--FFKEVN 236 Query: 228 TGIHTLMTLSMAA---MLSPQVDVRFATL 253 T + L + S +LS D+ F L Sbjct: 237 T-VQDLSSYSFCQSLYILSDINDILFEKL 264 >UniRef50_A5IJ71 CBS domain containing protein n=5 Tax=Thermotogaceae RepID=A5IJ71_THEP1 Length = 863 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 72/231 (31%), Positives = 108/231 (46%), Gaps = 38/231 (16%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDF-------------- 46 M +Y+VGG VRD LLG+ D D VV G+ + + + + F Sbjct: 470 MPVYVVGGFVRDLLLGIENLDIDIVVEGNALE------FAEYAKRFLPGKLVKHDKFMTA 523 Query: 47 PVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDV---TLEDDLKRRDLTINALA---- 99 +FL + A AR E PDV T++ DL RRD TINA+A Sbjct: 524 SLFLKGGLRIDIATARLEYYESPA-------KLPDVEMSTIKKDLYRRDFTINAMAIKLN 576 Query: 100 QDDNGEIIDPYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLA 158 D G +ID + G DL+ ++R + + +F +DP R+LR RF R+ FRI + T Sbjct: 577 SKDFGLLIDFFGGYRDLKEGVIRVLHTLSFVDDPTRILRAVRFEQRF---DFRIEETTER 633 Query: 159 LMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPE 209 L+++ G LE T R+ +E E L +NP + + ++ LFP+ Sbjct: 634 LLKQAVEEGYLERTTGPRLRQELEKILEEKNPLKSIRRMAQFDVIKHLFPK 684 >UniRef50_B7RKY8 tRNA nucleotidyltransferase n=2 Tax=Rhodobacteraceae RepID=B7RKY8_9RHOB Length = 394 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 71/218 (32%), Positives = 100/218 (45%), Gaps = 14/218 (6%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 IY VGG VR+ALLGLP D D + + P+ ++ + + P + T + + Sbjct: 35 IYFVGGCVRNALLGLPDSDVD-MSTDALPERVMALAKRAGLKTVPTGVEHGTVTVVSGGK 93 Query: 63 ----TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 T + G A ++DD +RRD TINAL D G +IDP GL DL+ Sbjct: 94 GFEVTTFRRDVQTDGRRAVVAFSNNIDDDARRRDFTINALYADAEGRVIDPLEGLPDLRA 153 Query: 119 RLLRHVSPA---FGEDPLRVLRVARFAARYAH--LGFRIADETLALMREMTHAGELEHLT 173 R +R + A ED LR LR RF A YA GF + AL ++ LE L+ Sbjct: 154 RRVRFIEDAEARIREDYLRTLRYFRFHAWYADPAKGF----DPDALSAIASNTAGLETLS 209 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEID 211 ER+ E + L+ +P +R G L + P D Sbjct: 210 AERIGAEMQKLLSAPDPAPALAGMRQTGVLNAILPGAD 247 >UniRef50_C8P0Q2 tRNA adenylyltransferase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0Q2_ERYRH Length = 443 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 96/323 (29%), Positives = 144/323 (44%), Gaps = 35/323 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA----GYQQVGRDFPV-FLHPQTH 55 ++++VGG VRDAL+G D D + + P+++L + G D+ + F+ + H Sbjct: 22 FEVFVVGGFVRDALMGHRSFDID-LCTNALPEQLLKIYKKYSIESNGHDYGIKFMSGEEH 80 Query: 56 EEYALARTERKSGSGY----TGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYN 111 E + R E G F + L DD KRRD T+NAL +ID Y+ Sbjct: 81 FEISTMRLEGDYEDGRRPSRVEFINH------LFDDSKRRDFTVNALYYHPRHGLIDYYD 134 Query: 112 GLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G+ DLQN LR + F ED LR+ R+ RF + LGF I ETL +++ T Sbjct: 135 GVKDLQNHTLRVIGDPKVRFKEDVLRIARLYRFKSE---LGFDIDAETLYVVQ--TQIES 189 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 L+ L +++ E L P L L LFP + G +H E Sbjct: 190 LQRLKLVQIYPELSRYLL--GPYFLETSLLCPEFLMTLFPPLKETLGFDQHNPFH-EYSL 246 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKG--LTPPELWPRHH-GHGPAGVKLVEQLC 285 HT+ T+ + +VD++ L HDLGK T + H+ GH A + Sbjct: 247 YEHTIRTMQ---GIPNRVDLKLVALFHDLGKSNVQTVDDQGIAHYPGHAQASCIIARPFF 303 Query: 286 QRLRVP-NEIRDLARLVAEFHDL 307 + L+ +I L +L+ E HDL Sbjct: 304 EALQFSIKKIAYLEKLILE-HDL 325 >UniRef50_C7LTC9 Poly(A) polymerase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTC9_DESBD Length = 424 Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 78/223 (34%), Positives = 107/223 (47%), Gaps = 27/223 (12%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDF---PVFLHPQTHEEY 58 YLVGG VRD LLG KD D V +TP ++ + Y +GR F + E Sbjct: 37 YLVGGGVRDLLLGRTPKDFD-VSTNATPSQIKKIFQNYFLIGRRFRLAHIRFDDHVIETS 95 Query: 59 ALART---ERKSGSGYTGF---TCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYN 111 R E ++G CY P E+D RRD TIN L + + IID Sbjct: 96 TFRRCPDQEEENGDEDLYMLRDNCYGTP----EEDALRRDFTINGLFYEVERFSIIDHVG 151 Query: 112 GLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETL-ALMREMTHAG 167 GL D++NRL+R + + F EDP+R++R RFAAR L F I T A+MR H Sbjct: 152 GLSDIENRLIRCIGDPNIRFREDPVRMIRAVRFAAR---LDFHIEPATYNAIMR---HHE 205 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEI 210 E+ +P RV++E + + + ++L G L L PEI Sbjct: 206 EILKASPPRVFEELQKLFAYGSGEKAVRLLYKTGLLHNLLPEI 248 >UniRef50_Q2RIR3 Polynucleotide adenylyltransferase region n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIR3_MOOTA Length = 383 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 99/216 (45%), Gaps = 27/216 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 ++YLVGG RD LLG P D D VV G+ + Q GR + E L Sbjct: 29 RVYLVGGTTRDLLLGRPDVDLDLVVEGNGLLLARELARQLGGR--------LVYHERFLT 80 Query: 62 RTERKSGSGYTGFTCY--------AAPDV---TLEDDLKRRDLTINALA----QDDNGEI 106 T +G T A P+V TL +DL RRD +INA+A D EI Sbjct: 81 ATIYWAGERVDVVTARKEYYPEPGALPEVEAATLAEDLARRDFSINAMALPLTARDLWEI 140 Query: 107 IDPYNGLGDLQNRLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 DP+NG DL +R + A F +DP R+LR R R L F++A ET L RE Sbjct: 141 RDPFNGRADLAAGKIRVLHQASFRDDPTRILRGVRLGTR---LHFQLASETRELAREALA 197 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCG 201 AG LE ++P R W+E L P ++ L G Sbjct: 198 AGYLELVSPRRFWQEFILLLKESRPVAAWEALLALG 233 >UniRef50_D2LT60 CBS domain containing protein n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LT60_BACS4 Length = 864 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 71/234 (30%), Positives = 105/234 (44%), Gaps = 40/234 (17%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQ------T 54 M+ YL+GG VRD LL P +D D VV G G F +L + Sbjct: 471 MRAYLIGGMVRDLLLQRPNEDVDIVVEGD-------------GMKFATYLQEKFGGQVRL 517 Query: 55 HEEYALARTERKSG------SGYTGFTCY--AAPDV---TLEDDLKRRDLTIN----ALA 99 HEE+ A + + S T F + A P V T+++DL RRD TIN AL Sbjct: 518 HEEFKTATWKHPNNLKIDVTSARTEFYDFPAALPKVEMSTMKEDLYRRDFTINAMGIALH 577 Query: 100 QDDNGEIIDPYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLA 158 +D G +ID + G DL N+ ++ + + +F EDP R+LR RF R+ F++ +ET Sbjct: 578 KDQFGVLIDYFQGYNDLLNKKIKILYNLSFIEDPTRILRAVRFECRFQ---FKMDEETFL 634 Query: 159 LMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDA 212 +E + L+ R+ E + NP + L L ++ ID Sbjct: 635 FAKEA--VNNIPSLSKTRLSNELKKMFQEENPALIIDRLHQLNILPLIITTIDT 686 >UniRef50_Q2B3W5 TRNA nucleotidyltransferase n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B3W5_9BACI Length = 400 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 15/205 (7%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFLHPQTHEEYALA 61 Y VGG+VRD LLG + D D + +TP E+ + VG + + + Y + Sbjct: 27 YFVGGSVRDYLLGKDISDVD-IATSATPMEIKGIFPRTADVGIEHGTVIVLYDGDSYEV- 84 Query: 62 RTERKSGSGYTGFTCYAAPDV--TLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 T +S S Y F + D +L++DLKRRD +N++A +G IIDP+ G D++++ Sbjct: 85 -TTFRSESDYEDFRRPSKVDFIRSLDEDLKRRDFRMNSMAMSKDGRIIDPFGGQEDIRSK 143 Query: 120 LLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 + V F ED LR++R RFA + L F+I ET + ++ A LE + ER Sbjct: 144 RIATVGNPLERFYEDALRMMRAVRFA---SQLSFQIDGETYEAL--VSEAYLLEKIAVER 198 Query: 177 VWKETESALTTRNPQVFFQVLRDCG 201 E E L N + +++ D G Sbjct: 199 KLAEFEKLLAGENSFMALKIMADTG 223 >UniRef50_B2S2L8 Polynucleotide adenylyltransferase n=2 Tax=Treponema pallidum RepID=B2S2L8_TREPS Length = 478 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 77/227 (33%), Positives = 104/227 (45%), Gaps = 28/227 (12%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT----HEEY 58 IY+VGGAVRD LL D W + P E + ++ R P + T + Sbjct: 24 IYVVGGAVRDFLLNRSAHD--WDLATDAPPERVRMLFR---RTVPTGIEHGTVTILFRGH 78 Query: 59 ALARTERKSGSGYTG-----FTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNG 112 ++ T + S Y+ C+AA +EDDL RRD T+NA A +GEIID G Sbjct: 79 SIECTTFRVESDYSDRRHPDSVCFAA---RIEDDLARRDFTVNAFAAALPSGEIIDVCGG 135 Query: 113 LGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETL-ALMREMTHAGE 168 DL+N L+ V A F ED LR LR RFA A L F I T A++ H Sbjct: 136 YADLRNGLICSVGDAHARFSEDALRPLRAVRFA---AQLSFSIEARTREAIIALRAHTAR 192 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFG 215 + ERV E L T P + +++ + G L LFP + + G Sbjct: 193 ISR---ERVRDELSKMLCTPRPSIALRLMEETGLLHTLFPALAQVCG 236 >UniRef50_B1R1E7 Cca-adding enzyme n=2 Tax=Clostridium butyricum RepID=B1R1E7_CLOBU Length = 438 Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 73/266 (27%), Positives = 126/266 (47%), Gaps = 27/266 (10%) Query: 4 YLVGGAVRDALLGLPVKDRDWV------VVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEE 57 Y+VGG VRD L+ D D VV +++ G + V ++ +E Sbjct: 26 YMVGGCVRDLLINREPNDYDITTNAKPEVVARLFDKVILTGLKH--GTVTVVINKVQYE- 82 Query: 58 YALARTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 T R+ G VT +++DL RRD TINA+A + +ID ++GL DL Sbjct: 83 ---VTTYREDGEYKDSRHPENVKFVTDIKNDLSRRDFTINAMAYNKEKGLIDYFDGLSDL 139 Query: 117 QNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +N+++R V F ED LR+LR RFA + L F+I + + ++ + LE ++ Sbjct: 140 KNKVIRTVGNPEKRFTEDSLRMLRAVRFAVQ---LDFKIEESIIQSIKILNK--NLEFIS 194 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ +E + + +NP ++L +C L+ + ++D + K + ++ Sbjct: 195 KERI-REEFNKIILKNPN-GLKLLHECSILKYVADDLDKAYDYYINDKINC---YNLYEH 249 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGK 259 + LS + + + +R L HDLGK Sbjct: 250 LILS-SCNIKKDLSLRLTMLFHDLGK 274 >UniRef50_C1XQ82 Uncharacterized domain HDIG-containing protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XQ82_9DEIN Length = 410 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 94/295 (31%), Positives = 129/295 (43%), Gaps = 28/295 (9%) Query: 10 VRDALLGLPVKDRDWVVVGSTPQEML-DAGYQQVGRDFPVFLHPQTHEEYALARTERKSG 68 +RD +LG KD D+VV P+E D ++ G FP+ E+ R G Sbjct: 1 MRDLMLGKRPKDLDFVV--PNPEEAARDLAHRLGGSIFPL------DEKRRFWRVV-APG 51 Query: 69 SGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRHVSPA- 127 + Y YA LE DL RRD T+NALA ++ G ++ DL++RLLR + A Sbjct: 52 TTYD----YAPMPQGLEVDLLRRDFTLNALAVNEQGLVLGLPIARYDLEHRLLRAIRKAN 107 Query: 128 FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP--ERVWKETESAL 185 EDPLR LR R G R+ T + E P ERV +E L Sbjct: 108 LWEDPLRSLRAVRITLTA---GLRLEPHTEGWIYEHAQYLRESGALPAWERVGEELSQIL 164 Query: 186 TTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSP- 244 V F L G L V PE+ A GV H +D H+L L+ +L P Sbjct: 165 RHPAAAVGFLRLERAGLLEVYLPELAAGIGVEQHGAHH--LDVWRHSLEVLAQLTLLRPD 222 Query: 245 -QVDVRFATLCHDLGKGLT----PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + +R+A L HD+ K T P + +GH G + Q+ RLR P+E+ Sbjct: 223 AHLALRWAALLHDVAKPQTRQWSPEKGRYTFYGHDALGAEQARQILNRLRQPSEV 277 >UniRef50_Q126S3 Poly(A) polymerase n=15 Tax=Burkholderiales RepID=Q126S3_POLSJ Length = 550 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 76/246 (30%), Positives = 122/246 (49%), Gaps = 41/246 (16%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPV----FLHPQTHE- 56 Y+VGGAVRD L+GL KD D V +TP+++ + +GR F + + + HE Sbjct: 68 YVVGGAVRDLLVGLRPKDFD-VATDATPEQVKSLFRRAFIIGRRFRIVHVIYGRGREHEV 126 Query: 57 -EYALAR-------------TERKSGSGYTGFTCYAAPDVT-----------LEDDLKRR 91 E ++ R ER S S G A D + LE+D RR Sbjct: 127 IEVSIFRAHLDSSLAEQVGGNERTSKSELAGMKH--AVDSSGRVLRDNVWGPLEEDAARR 184 Query: 92 DLTINALAQDDNGEII-DPYNGLGDLQNRLLRHV-SPA--FGEDPLRVLRVARFAARYAH 147 D TINA+ D +I+ D +NG+ D + +++R + +PA + EDP+R++R RF A+ + Sbjct: 185 DFTINAMYYDPETQIVVDYHNGIRDAKKKIIRMIGNPAVRYREDPVRIIRAVRFGAKLSA 244 Query: 148 LGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLF 207 LGF+ D+T A +REM+ L + R++ E L T + + L+ G ++ Sbjct: 245 LGFKFEDKTSAPLREMSSL--LADVPQSRLFDEMLKLLQTGHSLASVEQLKTLGLGTGIY 302 Query: 208 PEIDAL 213 P +D + Sbjct: 303 PLLDVV 308 >UniRef50_B2A4Y6 CBS domain containing protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4Y6_NATTJ Length = 890 Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 34/232 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG---YQQVGRDFPVFLHPQTHE- 56 K+Y VGG +RD LLG D D V+ Q+ + + + D F QT Sbjct: 487 FKVYGVGGFIRDLLLGKDNLDIDLVI----EQDAISFAKLVSKHLNGDLKTFSQFQTARL 542 Query: 57 --------EYALARTERKSGSGYTGFTCYAAPDV---TLEDDLKRRDLTINALAQDDN-- 103 ++A AR E Y F A+P+V T++ DL RRD TIN LA + N Sbjct: 543 TLRSGTRIDFATARIE------YYAFPA-ASPEVEESTIKQDLYRRDFTINTLAVELNCN 595 Query: 104 --GEIIDPYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALM 160 G+++D + G DL+ ++R + + +F EDP R+ R RF +R+ F I ++TL + Sbjct: 596 SFGKLLDFFGGTKDLKKGVIRVLYNLSFVEDPTRIFRAIRFESRF---NFNIEEQTLIFI 652 Query: 161 REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDA 212 + G L+ L ER+++E + + F+ + + G +FP ++ Sbjct: 653 KNSLETGVLDKLPGERLYEELRNIVDEDEAVNTFRRMDELGIFTKIFPNLNV 704 >UniRef50_UPI000197324F tRNA nucleotidyltransferase/poly(A) polymerase family protein n=2 Tax=Clostridium RepID=UPI000197324F Length = 430 Score = 84.7 bits (208), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 83/277 (29%), Positives = 126/277 (45%), Gaps = 52/277 (18%) Query: 4 YLVGGAVRDALLG-LPVKDRDW-VVVGSTPQEM-------LDAGYQQ---------VGRD 45 + VGG VRD +L +P DW + + P E+ +D G Q VG + Sbjct: 32 FAVGGCVRDTILNRIP---GDWDITTSAKPVEVKAVFGKTVDTGLQHGTVTVIRDHVGYE 88 Query: 46 FPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGE 105 + + EY R R+ FT L +DL+RRD TINA+A Sbjct: 89 ITTY---RIDGEYEDGRHPRE-----VEFTS------DLREDLRRRDFTINAMAYSPETG 134 Query: 106 IIDPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMRE 162 ++D + G+ DL+NR +R V A FGED LR++R RFA + L F I +ET + Sbjct: 135 LVDIFGGMEDLKNRTIRCVGNAVERFGEDALRIMRAVRFA---SQLDFSIEEETYRALSG 191 Query: 163 MTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKW 222 + A L H++ ER+ E L + PQ V+ D G + P + A F P + Sbjct: 192 I--APNLAHVSKERIQVELTKTLLSGRPQGVL-VMEDTG----MCPYMTAGF----PGIF 240 Query: 223 HPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGK 259 ++GI+ L +A+L + +R+A LG+ Sbjct: 241 SKARESGINLEERLKRSALLPQEKSLRYAVFLGHLGE 277 >UniRef50_Q1CTN2 Poly(A) polymerase n=15 Tax=Helicobacter RepID=Q1CTN2_HELPH Length = 425 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 96/197 (48%), Gaps = 17/197 (8%) Query: 3 IYLVGGAVRDALLGLPVKDRDWV---VVGSTPQEMLDAGYQ--QVGRDFPVFLHPQTHEE 57 +YLVGG VRD L+G+ KD D +V + + +L+ ++ + G + H+ Sbjct: 22 LYLVGGCVRDCLMGITPKDYDLTSNALVNESKEILLNNHFRVLETGIKHGTITALKNHQS 81 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 Y + + G L DDLKRRD ++NA+A +IDP+ G ++ Sbjct: 82 YEITTFRIEKGHIKHRKPKELVFSSRLTDDLKRRDFSMNAIAYSPTKGLIDPFKGQNAIE 141 Query: 118 NRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE--LEHL 172 N+++ V A F ED LR+LR RF+A LGF+I T +E A + L+HL Sbjct: 142 NQVIECVGGARLRFFEDALRILRALRFSAT---LGFKIVPST----KEAVFACKDLLKHL 194 Query: 173 TPERVWKETESALTTRN 189 + ER+ E L +N Sbjct: 195 SKERLQSELNKLLMGKN 211 >UniRef50_A4E6N1 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E6N1_9ACTN Length = 464 Score = 84.3 bits (207), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 100/336 (29%), Positives = 147/336 (43%), Gaps = 51/336 (15%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVG--STPQEMLDAGYQQVGRDFPVF--LHPQTHE 56 ++ + VGG VRDAL+G P D D G + L+A V F + + Sbjct: 27 LEAWYVGGWVRDALMGYPSHDVDMCCSGLWQESKAALEAAGIAVVESGIKFGGITAISDG 86 Query: 57 EYALARTERKSGSGYTGFTCYAAP-DVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 E T R G G + +LEDDL RRD T+NA+A ++D Y+G GD Sbjct: 87 ERIEVTTYRLDGFYTDGRHPQSVERAASLEDDLARRDFTVNAMAWHPERGLVDRYDGQGD 146 Query: 116 LQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L+ +L+R V F ED LR+LR RFA R L F I ET + E A L+ + Sbjct: 147 LERKLIRAVGDPKRRFNEDALRMLRAVRFACR---LDFMIEPETKRALAEC--APLLDAV 201 Query: 173 TPERVWKETESALTT--------RNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHP 224 ERV E E L+T R P++ C ++ PE+ A G + +H Sbjct: 202 ARERVGIELEGILSTGHGGDAMLRYPELI------CASV----PELAAGRGFDQRSVYHA 251 Query: 225 EIDTGIHTLMTLSMAAML------SPQVDVRFATLCHDLGKGLTPPELWPRHH------- 271 + H L++A L +P + +A HD+ K PE + H Sbjct: 252 -FNVYEHIARVLTVAGELALCDGVAPSSSLMWAAFLHDVSK----PECFTVDHAGSGHFY 306 Query: 272 GHGPAGVKLVEQLCQRLRVPNE-IRDLARLVAEFHD 306 GH G K + RL + ++ +RD+ L+ ++HD Sbjct: 307 GHPELGAKKARVIMDRLALSHDLVRDVCLLI-KYHD 341 >UniRef50_A6Q2Y3 RNA nucleotidyltransferase n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q2Y3_NITSB Length = 392 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 22/196 (11%) Query: 2 KIYLVGGAVRDALLG------LPVKDRDWVVVGSTPQE----MLDAGYQQVGRDFPVFLH 51 ++Y+VGGAVRD + + + D D V G P+E ML G + VG+ F V+ + Sbjct: 39 RVYMVGGAVRDLIRIVLEKQPIAIVDLDIEVYGIKPKEFDALMLQLGAKGVGKSFFVYKY 98 Query: 52 PQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPY 110 + H + +L R E K G G+ F A D RRD +NAL + GE++D + Sbjct: 99 KE-HIDISLPRIESKVGRGHKAFVVDLAKDEKSASI--RRDFKMNALMLNIFTGELLDFW 155 Query: 111 NGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 G+ D++++ + + + F ED LRVLR +F+AR+ G+RI + +M+ + L Sbjct: 156 GGVEDIKHKRISIIDAEKFKEDSLRVLRAMQFSARF---GYRIEKRSCKVMQGIA----L 208 Query: 170 EHLTPERVWKETESAL 185 + L+ ER++ E E Sbjct: 209 DDLSHERIFWEFEKMF 224 >UniRef50_Q74B57 PolyA polymerase family protein n=1 Tax=Geobacter sulfurreducens RepID=Q74B57_GEOSL Length = 430 Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 72/182 (39%), Positives = 94/182 (51%), Gaps = 21/182 (11%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRD-FPVFLHPQTHEEYALAR 62 + VGG VRDALL P D D +VVG +++ A ++G FP+ EE AR Sbjct: 29 WFVGGCVRDALLARPSNDID-IVVGPGGEDLPRAVAARIGGSFFPL------DEERGHAR 81 Query: 63 TERKSGSGYTGFTCYAAP--DVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNR 119 K G +C AP T+ DL RD TINALA + +++DP G DL R Sbjct: 82 VVLKG----EGASCDFAPLQGGTIAADLALRDFTINALAVSCGSDDLLDPLGGAADLAQR 137 Query: 120 LLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 ++R S AF DPLR++R RFA AHL F I TLAL+ + HA L + ER+ Sbjct: 138 VIRACSAGAFAADPLRIVRAYRFA---AHLDFEIHAATLALIPD--HAPLLATVAGERIR 192 Query: 179 KE 180 E Sbjct: 193 DE 194 >UniRef50_A6TR64 Polynucleotide adenylyltransferase region n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TR64_ALKMQ Length = 875 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 72/228 (31%), Positives = 113/228 (49%), Gaps = 30/228 (13%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGS--TPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +++VGG VRD LLG +D D+VV G + L+ Q GR HE++ Sbjct: 475 VFIVGGFVRDFLLGEENQDLDFVVEGDGIAFAQALNEIIQ--GR-------LTIHEKFGT 525 Query: 61 ARTE---RKSGSGYTGFTCY-----AAPDV---TLEDDLKRRDLTINALAQDDN----GE 105 A + +++ T Y A P V ++ DL RRD TINA+A N G+ Sbjct: 526 ATIQLPDKRTLDVVTARREYYEYPAAMPQVEKSSIWSDLFRRDFTINAMAIQLNKSKFGQ 585 Query: 106 IIDPYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 +ID + G+ DL+++ +R + + +F EDP R+ R RF+ R L F I DET + E Sbjct: 586 LIDYFGGIQDLEDKNIRVLYNLSFVEDPTRIFRAIRFSTR---LNFNIEDETKTFIHEAI 642 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDA 212 G L+ L+ ER+ +E + + +N Q L L ++ P++ A Sbjct: 643 KDGMLDRLSAERLREEILNTILEKNIQENILSLDRFKVLEIIHPKLQA 690 >UniRef50_A3M290 Poly(A) polymerase I (PAP) n=18 Tax=Acinetobacter RepID=A3M290_ACIBT Length = 487 Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 59/416 (14%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVF--LHPQTHEEYALA 61 Y+VGG VRD +LGL KD D V +TP ++ + ++ F H + E Sbjct: 35 YIVGGGVRDLMLGLNPKDFD-AVTNATPSQIKEVFGRRCRIIGRRFELAHVYSGRELIEV 93 Query: 62 RTER----KSGSGYTGFTCYAAPDVTLEDDLKRRDLTINAL-AQDDNGEIIDPYNGLGDL 116 T R K+ + +G T+E D RRD +IN L Q G ++D + D+ Sbjct: 94 ATFRAPPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPRKGIVLDFCKAIDDV 153 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMR-EMTHAGELEHL 172 +++ LR + F EDP+R+LR RFAA+ L F+I L + EMT L + Sbjct: 154 KSKTLRLLGDPVQRFEEDPVRMLRTLRFAAK---LNFKIDPAILDIFDVEMTQL--LRDV 208 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 +P R++ E++ T + +L D G + LF +I P + D I Sbjct: 209 SPHRLYDESQKLFTMGHLARVLPMLIDFGVWKQLFADIRPDL-TPFIQRAAKNTDQRIQV 267 Query: 233 LMTLSMAAMLSPQVDVRFATLC-HDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 T++ A + + F C L KG+ P E AG+ ++++ R +P Sbjct: 268 GKTINPAFFYAVLLWQPFLERCDFYLSKGVVPAE------ARAQAGLDVLKRQATRTVIP 321 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 R V E +LNP KPQ++E LA + R R G Sbjct: 322 RFAETFIREVWEMQTR-----LLNP--------------KPQQIEALA----SHARFRAG 358 Query: 352 FE--------SADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAA 399 F+ D QG + WE Q + EA ++ +RR++AA Sbjct: 359 FDFLLLREKSGDDTTQG--MGSWWEAYQEMSNDE-KEAAISQYNRQKAKSRRKVAA 411 >UniRef50_B8CW03 CBS domain containing protein n=1 Tax=Halothermothrix orenii H 168 RepID=B8CW03_HALOH Length = 865 Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 26/196 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEML--------DAGYQQVGRDFPVFLHP 52 +++YLVGG VRD +LGL D D++V G+ + + Y + + L+ Sbjct: 477 VRVYLVGGMVRDLILGLENNDLDFMVEGNIKYYLRALSRTFEENYTYNDKFKTGRIRLNS 536 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDV---TLEDDLKRRDLTINALA----QDDNGE 105 + ++A+AR+E + G A P+V + +DL RRD T+NALA + G Sbjct: 537 GYNLDFAVARSEVYTSPG-------ALPEVETGEIVEDLFRRDFTVNALAIGVDSQNWGT 589 Query: 106 IIDPYNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 +ID + G+ D++++ LR + +F +DP R++R R A R LGF D+T LM+E Sbjct: 590 LIDFFGGIHDIEHKKLRVLHRFSFLDDPTRIIRGLRLALR---LGFSFQDKTNLLMKEAL 646 Query: 165 HAGELEHLTPERVWKE 180 G + ++ R+ KE Sbjct: 647 KFGNFKRISKPRIIKE 662 >UniRef50_Q01SN7 Polynucleotide adenylyltransferase region n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01SN7_SOLUE Length = 437 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 35/252 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG---------RDFPVFLH 51 + ++L GGA+RD + G ++D D+VV G+ + M A ++ G R + Sbjct: 32 VNVFLTGGAMRDMIAGFRIRDLDFVVEGNALK-MAKAICEKTGATLVSSDENRKTAEIVF 90 Query: 52 PQ-THEEYALARTERKSGSGYTGFTCYAAPDV---TLEDDLKRRDLTINALAQDDN---- 103 P + ++R E+ + SG P V T+++DL+ RD T NA+A N Sbjct: 91 PSGVTAQIGMSRQEKYARSG-------GKPQVTPATIQEDLRGRDFTANAIALSLNRASR 143 Query: 104 GEIIDPYNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMRE 162 G ++DP NGL D++ + LR VS F +DP R+LR+ RF R LGF I + T + Sbjct: 144 GLLLDPMNGLADIERKELRAVSTYGFYDDPTRLLRLVRFKVR---LGFTIEERTQMQVAN 200 Query: 163 MTHAGELEHLTPERVWKETESALTTR-NPQVFFQVLRDCGALRVLFPEIDALFGVPAPAK 221 A E+E P + E ++ NP + L + G L + P + + + AK Sbjct: 201 AREA-EVEKRIPAKALGEELKRISAEDNPTEILKGLEEAGLLAMFSPVLFGKLNLASLAK 259 Query: 222 WHPEIDTGIHTL 233 ++ +H L Sbjct: 260 ----LEKALHVL 267 >UniRef50_C3KX88 Conserved domain protein n=11 Tax=Clostridium RepID=C3KX88_CLOB6 Length = 398 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 63/212 (29%), Positives = 114/212 (53%), Gaps = 28/212 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG-RDFPVF--LHPQTHEE 57 +KIY++GGA+RD +L + D D + G P+E++ Y+ +++ + H T + Sbjct: 27 IKIYIIGGAIRDIILNNKINDIDICLEGE-PKELI---YRMKNIKEYIYYDEFHTSTIKF 82 Query: 58 YALARTE----RKSGSGYTGFTCYAAPDVTL---EDDLKRRDLTINALAQDD-NGEIIDP 109 + + RK Y G A P +TL +++L+RRD TINALA D +I+D Sbjct: 83 QNNIQIDLIGCRKEKYEYEG----ALPKITLSNIKNNLERRDFTINALAYDIVEDKILDF 138 Query: 110 YNGLGDL-QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 +NG+ DL + ++++ + ++ ED R+ R +++ RY GF+I DE +RE G Sbjct: 139 FNGMEDLRKGKIIKIHNNSYMEDGTRIFRAIKYSIRY---GFKIEDE--KEIRESITKGT 193 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDC 200 L++++ +R+ E S T N + + ++ C Sbjct: 194 LKNISNDRIVSELYSLCTEEN---WIEAIKQC 222 >UniRef50_A4XLP3 tRNA adenylyltransferase n=2 Tax=Clostridia RepID=A4XLP3_CALS8 Length = 394 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 30/229 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFP----VFLHPQTHE 56 K YLVGG +RD LLG +D D + + P++++ + + + Sbjct: 20 FKAYLVGGCLRDYLLGTTPQDFD-IATDAKPEDVMKLFEKTIPTGIKHGTVTVIINNVKI 78 Query: 57 EYALARTERKSGSGYTGFTCYAAPDV----TLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 E R E++ + + P V +L +DLKRRD TINALA + +ID +NG Sbjct: 79 EVTTFRIEKE-------YQNHRWPTVEFTDSLYEDLKRRDFTINALAYHPDEGLIDYFNG 131 Query: 113 LGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADET---LALMREMTHA 166 L DL+N+++R V F ED LR+LR RFA + L F I ++T + L++++ Sbjct: 132 LDDLKNKIVRCVGNPHERFFEDALRILRCIRFATQ---LNFSIDEKTFEGVVLLKDL--- 185 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFG 215 L+ ++ ER+ E L ++N ++L + G + PE ++ Sbjct: 186 --LKKISKERINAELSKILRSKNSLYGIKLLYESGVGETVIPEYIKIYS 232 >UniRef50_Q043S5 CCA-adding enzyme n=7 Tax=Lactobacillus RepID=CCA_LACGA Length = 398 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 101/214 (47%), Gaps = 33/214 (15%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-------LDAGYQQVGRDFPVFLHPQTHE 56 Y VGG+VRD LL + D D + + P E+ +D G + L+ Sbjct: 28 YFVGGSVRDLLLNRHIHDVD-IATSAYPMEIKQIFKKTIDTG---IKHGTVTVLYEGESY 83 Query: 57 EYALARTERKSGSGYTGFTCYAAPD-VT----LEDDLKRRDLTINALAQDDNGEIIDPYN 111 E RTE +G+ + PD VT L +DLKRRD TINALA +G +ID ++ Sbjct: 84 EITTFRTE-------SGYQDFRRPDHVTFVQNLSEDLKRRDFTINALAMGVDGNVIDHFD 136 Query: 112 GLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 GLGDL L+R V A F ED LR++R RF ++ L F + ET R ++ E Sbjct: 137 GLGDLDKHLIRAVGKAENRFHEDALRMMRAVRFMSQ---LQFTLEPET---ERAISDNHE 190 Query: 169 -LEHLTPERVWKETESALTTRNPQVFFQVLRDCG 201 L ++ ER+ E Q FQ+ D G Sbjct: 191 LLSKISVERIRDEFVKMGIAPGSQKAFQIFLDTG 224 >UniRef50_C6JPJ4 Poly(A) polymerase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JPJ4_FUSVA Length = 448 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 90/342 (26%), Positives = 151/342 (44%), Gaps = 29/342 (8%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQ--EMLDAGY-QQVGRDFPVFLHPQTHEEYAL 60 Y+VGG VRD+LLGL KD D+V S + E+ + +++G+ F + Y + Sbjct: 27 YIVGGYVRDSLLGLKPKDCDFVTNLSYEKLLEIFKEFHPKEIGKAFGIIQIKYKGIHYEI 86 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNR 119 A+ + G + +DLKRRD TINA+A D +N ++ + + D+ N+ Sbjct: 87 AKYRKDIGVPEDRREQEVEFTDNIMEDLKRRDFTINAVAFDGENYRYVE--HAVEDIMNK 144 Query: 120 LLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 LR V A EDPLRV+R RF L + + + + + + ++ L+ ER Sbjct: 145 NLRFVGGAPERIKEDPLRVMRFIRF------LVTKNLNNKNDIKQILPYIPLVKKLSMER 198 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPE--IDALFGVPAPAKWHPEIDTGIHTLM 234 + E +T + ++L G L L PE F P H + H Sbjct: 199 MRDEFSKIITADDAHSAIELLEKTGILEYLIPEWTKTKKFNQRNP---HHNLTLDEH--- 252 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGK--GLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 + A + +++R A L HD+GK T +GH L E++ R++ N Sbjct: 253 IKKVVASIEGDIELRLAALLHDIGKPQTYTLKNGIGHFYGHEQESAVLAEKILLRMKYAN 312 Query: 293 EI-RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQ 333 +I +++ L+A + ++ N K KL + I P+ Sbjct: 313 KIVKNVTLLIA---NHLNNSKNSNKKYCKKLIEKIGYENMPK 351 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q65Q41 Phosphatase n=50 Tax=Gammaproteobacteria RepID=C... 504 e-141 UniRef50_Q1LSL7 Phosphatase n=12 Tax=Gammaproteobacteria RepID=C... 489 e-137 UniRef50_C6N613 tRNA nucleotidyltransferase n=2 Tax=Legionella R... 470 e-131 UniRef50_A1W3D0 Phosphatase n=492 Tax=cellular organisms RepID=C... 459 e-128 UniRef50_A3NQD4 Phosphatase n=74 Tax=Bacteria RepID=CCA_BURP0 433 e-120 UniRef50_Q7U350 CCA-adding enzyme n=2 Tax=Candidatus Blochmannia... 431 e-119 UniRef50_A8PL05 Multifunctional CCA protein n=1 Tax=Rickettsiell... 423 e-117 UniRef50_A6FG51 Putative tRNA nucleotidyltransferase n=1 Tax=Mor... 418 e-115 UniRef50_Q3IK69 tRNA nucleotidyl transferase n=2 Tax=Alteromonad... 416 e-115 UniRef50_Q125I3 Metal dependent phosphohydrolase n=2 Tax=Proteob... 411 e-113 UniRef50_A6VN94 CCA-adding enzyme n=4 Tax=Pasteurellaceae RepID=... 404 e-111 UniRef50_Q8D2W4 CCA-adding enzyme n=1 Tax=Wigglesworthia glossin... 400 e-110 UniRef50_Q1IG27 CCA-adding enzyme n=7 Tax=Gammaproteobacteria Re... 387 e-106 UniRef50_Q058D0 CCA-adding enzyme n=2 Tax=Buchnera aphidicola Re... 385 e-105 UniRef50_B8D8L9 CCA-adding enzyme n=4 Tax=Buchnera aphidicola Re... 384 e-105 UniRef50_A9KEZ9 CCA-adding enzyme n=6 Tax=Coxiella burnetii RepI... 358 1e-97 UniRef50_Q2BK09 TRNA nucleotidyl transferase n=1 Tax=Neptuniibac... 358 2e-97 UniRef50_B4RVV4 CCA-adding enzyme n=2 Tax=Alteromonas macleodii ... 356 9e-97 UniRef50_A5WEX7 tRNA cytidylyltransferase n=1 Tax=Psychrobacter ... 350 7e-95 UniRef50_A0Y839 TRNA nucleotidyltransferase, putative n=1 Tax=ma... 348 3e-94 UniRef50_A0Z6Y3 TRNA nucleotidyltransferase, putative n=2 Tax=un... 347 4e-94 UniRef50_Q5QY23 CCA-adding enzyme n=1 Tax=Idiomarina loihiensis ... 346 9e-94 UniRef50_A1U5G5 CCA-adding enzyme n=3 Tax=Alteromonadales RepID=... 346 1e-93 UniRef50_A3WPG7 TRNA nucleotidyltransferase n=1 Tax=Idiomarina b... 342 1e-92 UniRef50_Q1QC26 Polynucleotide adenylyltransferase region n=2 Ta... 341 4e-92 UniRef50_B5JXP2 tRNA nucleotidyltransferase n=1 Tax=gamma proteo... 340 6e-92 UniRef50_A6VU49 Polynucleotide adenylyltransferase region n=2 Ta... 339 2e-91 UniRef50_Q1QZ27 Polynucleotide adenylyltransferase region n=1 Ta... 338 2e-91 UniRef50_UPI0000E0E587 tRNA nucleotidyltransferase n=1 Tax=Rhodo... 331 4e-89 UniRef50_C6PT81 Polynucleotide adenylyltransferase/metal depende... 321 4e-86 UniRef50_C8PZE9 Multifunctional CCA protein n=1 Tax=Enhydrobacte... 321 4e-86 UniRef50_UPI0000E87B3C tRNA nucleotidyl transferase, putative n=... 320 7e-86 UniRef50_B3DZP1 tRNA nucleotidyltransferase/poly(A) polymerase n... 316 1e-84 UniRef50_A5EXT8 TRNA nucleotidyltransferase n=1 Tax=Dichelobacte... 316 1e-84 UniRef50_A0L904 Polynucleotide adenylyltransferase region n=1 Ta... 312 1e-83 UniRef50_B1KWG6 PolyA polymerase family protein n=16 Tax=Clostri... 310 6e-83 UniRef50_Q0F3A3 TRNA nucleotidyltransferase n=1 Tax=Mariprofundu... 308 2e-82 UniRef50_B9XMC7 Polynucleotide adenylyltransferase/metal depende... 308 2e-82 UniRef50_C1F9R3 tRNA nucleotidyltransferase/poly(A) polymerase f... 307 5e-82 UniRef50_C5ZY12 tRNA nucleotidyl transferase n=3 Tax=Helicobacte... 304 5e-81 UniRef50_A8MJB7 Polynucleotide adenylyltransferase/metal depende... 303 6e-81 UniRef50_B2UM12 Polynucleotide adenylyltransferase/metal depende... 303 9e-81 UniRef50_C7N377 tRNA nucleotidyltransferase/poly(A) polymerase n... 303 1e-80 UniRef50_C8N8W3 Multifunctional CCA protein n=1 Tax=Cardiobacter... 301 4e-80 UniRef50_D1RE93 Multifunctional CCA protein n=1 Tax=Legionella l... 300 6e-80 UniRef50_Q466Z1 tRNA nucleotidyltransferase n=1 Tax=Methanosarci... 300 8e-80 UniRef50_UPI0001BC63FF Poly(A) polymerase n=3 Tax=Fusobacterium ... 299 9e-80 UniRef50_A5Z8C9 Putative uncharacterized protein n=1 Tax=Eubacte... 299 1e-79 UniRef50_C9LM50 PolyA polymerase n=1 Tax=Dialister invisus DSM 1... 297 4e-79 UniRef50_UPI000196A9FA hypothetical protein CATMIT_01143 n=1 Tax... 296 8e-79 UniRef50_Q3EZB5 TRNA nucleotidyltransferase n=2 Tax=Bacillus thu... 296 1e-78 UniRef50_A6Q8W0 Polynucleotide adenylyltransferase/metal-depende... 295 2e-78 UniRef50_Q1IUE8 Metal dependent phosphohydrolase n=1 Tax=Candida... 294 5e-78 UniRef50_A6GQU7 Polynucleotide adenylyltransferase region:Metal-... 293 6e-78 UniRef50_C9XLQ0 Putative poly(A) polymerase n=6 Tax=Clostridium ... 293 9e-78 UniRef50_C4V4H3 Possible tRNA adenylyltransferase n=1 Tax=Seleno... 292 1e-77 UniRef50_C9KIT0 tRNA nucleotidyltransferase n=3 Tax=Veillonellac... 292 2e-77 UniRef50_B8QTX7 tRNA nucleotidyltransferase/poly(A) polymerase n... 292 2e-77 UniRef50_D1VT34 tRNA adenylyltransferase n=1 Tax=Peptoniphilus l... 291 2e-77 UniRef50_C1XKS4 Uncharacterized domain HDIG-containing protein n... 291 4e-77 UniRef50_C6DY30 Poly A polymerase family protein n=2 Tax=Clostri... 291 4e-77 UniRef50_A1AVM9 Polynucleotide adenylyltransferase region n=3 Ta... 290 6e-77 UniRef50_B8I4X8 Polynucleotide adenylyltransferase/metal depende... 290 8e-77 UniRef50_Q1Q5Z9 Similar to poly(A) polymerase n=2 Tax=Candidatus... 289 9e-77 UniRef50_A5UUL6 Polynucleotide adenylyltransferase/metal depende... 289 2e-76 UniRef50_C8PQT7 tRNA adenylyltransferase n=1 Tax=Treponema vince... 289 2e-76 UniRef50_Q2LST9 Poly A polymerase n=1 Tax=Syntrophus aciditrophi... 286 8e-76 UniRef50_Q7P2R0 POLY(A) POLYMERASE n=10 Tax=Fusobacterium RepID=... 286 1e-75 UniRef50_Q73NW9 PolyA polymerase family protein n=1 Tax=Treponem... 286 2e-75 UniRef50_C8W673 Polynucleotide adenylyltransferase/metal depende... 285 2e-75 UniRef50_C0R197 PolyA polymerase n=2 Tax=Brachyspira RepID=C0R19... 285 2e-75 UniRef50_B5JPR9 tRNA nucleotidyltransferase/poly(A) polymerase f... 284 3e-75 UniRef50_C3CTV2 Polynucleotide adenylyltransferase/metal-depende... 283 6e-75 UniRef50_B0AC07 Putative uncharacterized protein n=1 Tax=Clostri... 283 9e-75 UniRef50_C4GD15 Putative uncharacterized protein n=1 Tax=Shuttle... 282 1e-74 UniRef50_C1IAF4 PolyA polymerase n=1 Tax=Clostridium sp. 7_2_43F... 281 3e-74 UniRef50_C7N8U3 Polynucleotide adenylyltransferase/metal depende... 281 4e-74 UniRef50_B1I1S2 Metal dependent phosphohydrolase n=2 Tax=Clostri... 281 4e-74 UniRef50_A3DF92 Metal dependent phosphohydrolase n=3 Tax=Clostri... 280 6e-74 UniRef50_C7RG10 Polynucleotide adenylyltransferase/metal depende... 280 7e-74 UniRef50_D1CJ19 Polynucleotide adenylyltransferase/metal depende... 280 8e-74 UniRef50_UPI0001C37B0D poly A polymerase family protein n=1 Tax=... 279 1e-73 UniRef50_D1AKE0 Polynucleotide adenylyltransferase/metal depende... 278 2e-73 UniRef50_C6X292 tRNA nucleotidyltransferase n=24 Tax=Bacteroidet... 278 2e-73 UniRef50_D1N4S4 Polynucleotide adenylyltransferase/metal depende... 277 6e-73 UniRef50_D1Y2S7 Multifunctional CCA protein n=1 Tax=Pyramidobact... 276 8e-73 UniRef50_C0EC94 Putative uncharacterized protein n=1 Tax=Clostri... 276 1e-72 UniRef50_A9KL25 Polynucleotide adenylyltransferase/metal depende... 276 1e-72 UniRef50_C6NV27 tRNA nucleotidyltransferase n=1 Tax=Acidithiobac... 276 1e-72 UniRef50_C7MMX1 Uncharacterized domain HDIG-containing protein n... 274 3e-72 UniRef50_A4T0E4 Polynucleotide adenylyltransferase region n=2 Ta... 274 4e-72 UniRef50_Q7U391 CCA-adding enzyme n=5 Tax=Bordetella RepID=CCA_B... 274 4e-72 UniRef50_B4CZL9 tRNA adenylyltransferase n=1 Tax=Chthoniobacter ... 273 7e-72 UniRef50_A8REM2 Putative uncharacterized protein n=1 Tax=Eubacte... 272 2e-71 UniRef50_B0N1P8 Putative uncharacterized protein n=3 Tax=Bacteri... 271 3e-71 UniRef50_B0MLX5 Putative uncharacterized protein n=1 Tax=Eubacte... 271 5e-71 UniRef50_A9F087 Cca protein n=2 Tax=Myxococcales RepID=A9F087_SORC5 271 5e-71 UniRef50_B1CAN8 Putative uncharacterized protein n=1 Tax=Anaerof... 270 7e-71 UniRef50_D1BP90 Polynucleotide adenylyltransferase/metal depende... 270 7e-71 UniRef50_B6BWF7 CCA-adding enzyme n=1 Tax=beta proteobacterium K... 270 9e-71 UniRef50_A0M3Q3 TRNA nucleotidyltransferase n=19 Tax=Bacteroidet... 269 2e-70 UniRef50_D2RM72 Polynucleotide adenylyltransferase/metal depende... 269 2e-70 UniRef50_C0A6X1 Polynucleotide adenylyltransferase region n=1 Ta... 268 2e-70 UniRef50_D2L6A0 Polynucleotide adenylyltransferase/metal depende... 267 4e-70 UniRef50_A0Q8A2 CCA-adding enzyme n=18 Tax=Francisella RepID=CCA... 267 5e-70 UniRef50_C7LRX4 Polynucleotide adenylyltransferase/metal depende... 266 1e-69 UniRef50_C8WIX9 Polynucleotide adenylyltransferase/metal depende... 266 1e-69 UniRef50_Q47K87 Metal-dependent phosphohydrolase n=143 Tax=Actin... 265 2e-69 UniRef50_A4E6N1 Putative uncharacterized protein n=2 Tax=Collins... 265 3e-69 UniRef50_C6BVC7 Polynucleotide adenylyltransferase region n=1 Ta... 265 3e-69 UniRef50_C4F914 Putative uncharacterized protein n=1 Tax=Collins... 264 3e-69 UniRef50_A6P236 Putative uncharacterized protein n=1 Tax=Bactero... 264 4e-69 UniRef50_A5FA68 Polynucleotide adenylyltransferase/metal depende... 263 8e-69 UniRef50_C8W9Z0 Metal dependent phosphohydrolase n=1 Tax=Atopobi... 263 8e-69 UniRef50_A1AQP2 Metal dependent phosphohydrolase n=4 Tax=Desulfu... 262 2e-68 UniRef50_B7CE33 Putative uncharacterized protein n=1 Tax=Eubacte... 262 2e-68 UniRef50_C0WDS1 Metal-dependent phosphohydrolase n=1 Tax=Acidami... 262 2e-68 UniRef50_B1ZUE5 Polynucleotide adenylyltransferase region n=1 Ta... 261 5e-68 UniRef50_C4XGZ8 Putative tRNA nucleotidyltransferase n=1 Tax=Des... 261 5e-68 UniRef50_B4S8E4 Polynucleotide adenylyltransferase/metal depende... 258 2e-67 UniRef50_C6JPJ4 Poly(A) polymerase n=1 Tax=Fusobacterium varium ... 257 5e-67 UniRef50_B9CKT6 Cca-adding enzyme n=1 Tax=Atopobium rimae ATCC 4... 256 9e-67 UniRef50_D1U5B9 Polynucleotide adenylyltransferase/metal depende... 254 5e-66 UniRef50_C3PKZ9 tRNA nucleotidyltransferase n=2 Tax=Corynebacter... 254 6e-66 UniRef50_C5RPI7 tRNA adenylyltransferase n=1 Tax=Clostridium cel... 254 6e-66 UniRef50_A2VMT0 Poly(A) polymerase pcnA n=5 Tax=Corynebacterinea... 253 8e-66 UniRef50_B8HHS6 Polynucleotide adenylyltransferase/metal depende... 252 2e-65 UniRef50_D1PLQ0 Poly(A) polymerase n=1 Tax=Subdoligranulum varia... 250 6e-65 UniRef50_B1GZF8 CCA-adding tRNA nucleotidyltransferase n=1 Tax=u... 249 2e-64 UniRef50_D1C7Z9 Polynucleotide adenylyltransferase/metal depende... 248 2e-64 UniRef50_B1R1E7 Cca-adding enzyme n=2 Tax=Clostridium butyricum ... 248 3e-64 UniRef50_C0GPD7 Polynucleotide adenylyltransferase region n=1 Ta... 246 1e-63 UniRef50_UPI00016992C1 multifunctional tRNA nucleotidyl transfer... 244 6e-63 UniRef50_D1PZ77 PolyA polymerase n=1 Tax=Prevotella bergensis DS... 243 7e-63 UniRef50_B8FBG8 Polynucleotide adenylyltransferase/metal depende... 243 8e-63 UniRef50_Q1ASB2 Polynucleotide adenylyltransferase region n=1 Ta... 243 8e-63 UniRef50_C8X424 tRNA adenylyltransferase n=1 Tax=Desulfohalobium... 242 2e-62 UniRef50_C3WFG0 Poly(A) polymerase n=1 Tax=Fusobacterium mortife... 241 4e-62 UniRef50_Q4JSD7 TRNA nucleotidyltransferase n=4 Tax=Actinomyceta... 240 6e-62 UniRef50_C9L4X1 tRNA nucleotidyltransferase/poly(A) polymerase f... 240 8e-62 UniRef50_C4LGI1 tRNA nucleotidyltransferase n=3 Tax=Corynebacter... 240 9e-62 UniRef50_C6E493 Polynucleotide adenylyltransferase/metal depende... 239 1e-61 UniRef50_Q76YD7 Putative uncharacterized protein n=1 Tax=Aeromon... 239 2e-61 UniRef50_Q72B04 tRNA nucleotidyltransferase, putative n=4 Tax=De... 238 2e-61 UniRef50_D1VN96 Polynucleotide adenylyltransferase/metal depende... 236 9e-61 UniRef50_A8ZWH5 Polynucleotide adenylyltransferase/metal depende... 236 9e-61 UniRef50_C7N4V8 tRNA nucleotidyltransferase/poly(A) polymerase n... 232 1e-59 UniRef50_C4FTJ0 Putative uncharacterized protein n=1 Tax=Catonel... 231 3e-59 UniRef50_A6CGS1 Metal dependent phosphohydrolase n=1 Tax=Plancto... 231 4e-59 UniRef50_Q3A9F0 PolyA polymerase/tRNA nucleotidyltransferase fam... 230 6e-59 UniRef50_Q0TV45 PolyA polymerase family protein n=9 Tax=Clostrid... 229 1e-58 UniRef50_B6G1N2 Putative uncharacterized protein n=1 Tax=Clostri... 229 2e-58 UniRef50_Q8RJX5 Polynucleotide adenyltransferase n=1 Tax=Stigmat... 228 2e-58 UniRef50_Q0AVZ3 tRNA nucleotidyltransferase (CCA-adding enzyme) ... 227 4e-58 UniRef50_A8S304 Putative uncharacterized protein n=2 Tax=Clostri... 226 1e-57 UniRef50_C4G3Z5 Putative uncharacterized protein n=1 Tax=Abiotro... 226 1e-57 UniRef50_A4IQ63 CCA-adding enzyme n=11 Tax=Bacillaceae RepID=CCA... 225 2e-57 UniRef50_UPI00016C045F putative poly(A) polymerase n=1 Tax=Epulo... 225 2e-57 UniRef50_Q2RZU6 TRNA nucleotidyltransferase/poly(A) polymerase f... 225 2e-57 UniRef50_A4XLP3 tRNA adenylyltransferase n=2 Tax=Clostridia RepI... 224 4e-57 UniRef50_Q67QK4 Putative RNA nucleotidyltransferase n=1 Tax=Symb... 224 5e-57 UniRef50_Q6AJ41 Related to poly(A) polymerase n=1 Tax=Desulfotal... 224 5e-57 UniRef50_B0K130 Polynucleotide adenylyltransferase/metal depende... 224 6e-57 UniRef50_B8DJQ4 Metal dependent phosphohydrolase n=1 Tax=Desulfo... 223 9e-57 UniRef50_C7M1E9 Polynucleotide adenylyltransferase/metal depende... 223 1e-56 UniRef50_A1HMM1 Polynucleotide adenylyltransferase n=1 Tax=Therm... 223 1e-56 UniRef50_Q4K5Y6 Poly(A) polymerase n=49 Tax=cellular organisms R... 222 2e-56 UniRef50_A6W2I1 Poly(A) polymerase n=6 Tax=Oceanospirillales Rep... 221 4e-56 UniRef50_UPI000197324F tRNA nucleotidyltransferase/poly(A) polym... 221 5e-56 UniRef50_P0ABF3 Poly(A) polymerase n=179 Tax=Gammaproteobacteria... 220 7e-56 UniRef50_C5ESK6 Putative uncharacterized protein n=1 Tax=Clostri... 220 8e-56 UniRef50_C8P0Q2 tRNA adenylyltransferase n=1 Tax=Erysipelothrix ... 220 9e-56 UniRef50_B5YFC2 Poly A polymerase, putative n=2 Tax=Dictyoglomus... 219 2e-55 UniRef50_A6CRX0 tRNA nucleotidyltransferase n=1 Tax=Bacillus sp.... 219 2e-55 UniRef50_C4Z1D8 tRNA nucleotidyltransferase (CCA-adding enzyme) ... 219 2e-55 UniRef50_Q97M87 PolyA polymerase n=1 Tax=Clostridium acetobutyli... 218 2e-55 UniRef50_C0ZCG8 Probable tRNA CCA-adding enzyme n=1 Tax=Brevibac... 218 4e-55 UniRef50_A4A0Y5 Poly A polymerase n=1 Tax=Blastopirellula marina... 216 1e-54 UniRef50_Q5ZVA2 Poly(A) polymerase I n=4 Tax=Legionella pneumoph... 216 1e-54 UniRef50_A8YV39 CCA-adding enzyme n=19 Tax=Lactobacillus RepID=C... 216 1e-54 UniRef50_A1UTI1 TRNA-nucleotidyltransferase n=4 Tax=Rhizobiales ... 215 3e-54 UniRef50_Q39QS9 Poly(A) polymerase, PcnB n=5 Tax=Desulfuromonada... 214 4e-54 UniRef50_C2E651 tRNA CCA-pyrophosphorylase n=1 Tax=Lactobacillus... 214 4e-54 UniRef50_A8GIZ2 Poly(A) polymerase n=61 Tax=Gammaproteobacteria ... 214 5e-54 UniRef50_Q043S5 CCA-adding enzyme n=7 Tax=Lactobacillus RepID=CC... 213 8e-54 UniRef50_C7H286 Metal dependent phosphohydrolase n=1 Tax=Faecali... 213 9e-54 UniRef50_A6NVT9 Putative uncharacterized protein n=1 Tax=Bactero... 213 1e-53 UniRef50_A4BLN3 PolyA polymerase n=2 Tax=Gammaproteobacteria Rep... 213 1e-53 UniRef50_A0Q3L3 PolyA polymerase family protein n=2 Tax=Clostrid... 213 1e-53 UniRef50_A8Z5W3 tRNA nucleotidyltransferase n=2 Tax=Candidatus S... 212 2e-53 UniRef50_B2S2L8 Polynucleotide adenylyltransferase n=2 Tax=Trepo... 212 3e-53 UniRef50_Q5E2T5 Poly(A) polymerase I n=6 Tax=Gammaproteobacteria... 211 3e-53 UniRef50_C7LTC9 Poly(A) polymerase n=1 Tax=Desulfomicrobium bacu... 211 3e-53 UniRef50_Q31FF3 Poly(A) polymerase n=1 Tax=Thiomicrospira crunog... 211 4e-53 UniRef50_UPI0001C30E56 polynucleotide adenylyltransferase/metal ... 211 4e-53 UniRef50_C0QG74 tRNA nucleotidyltransferase/poly(A) polymerase n... 210 8e-53 UniRef50_C7LX86 tRNA adenylyltransferase n=1 Tax=Desulfomicrobiu... 210 1e-52 UniRef50_B2A4Y6 CBS domain containing protein n=1 Tax=Natranaero... 210 1e-52 UniRef50_Q1WU19 CCA-adding enzyme n=30 Tax=Lactobacillales RepID... 210 1e-52 UniRef50_C0M731 CCA-adding enzyme n=4 Tax=Streptococcus dysgalac... 209 1e-52 UniRef50_C5NYM2 CCA-adding enzyme n=1 Tax=Gemella haemolysans AT... 209 1e-52 UniRef50_B7VK01 Poly(A) polymerase n=23 Tax=Bacteria RepID=B7VK0... 209 1e-52 UniRef50_B1MYC1 CCA-adding enzyme n=7 Tax=Lactobacillales RepID=... 209 2e-52 UniRef50_A7HLG0 Polynucleotide adenylyltransferase region n=4 Ta... 208 3e-52 UniRef50_C0WTJ5 tRNA nucleotidyltransferase/poly(A) polymerase n... 208 3e-52 UniRef50_C9R471 Poly(A) polymerase (PAP) (Plasmid copy number pr... 208 3e-52 UniRef50_A8SDN5 Putative uncharacterized protein n=1 Tax=Faecali... 208 4e-52 UniRef50_C1XQ82 Uncharacterized domain HDIG-containing protein n... 207 5e-52 UniRef50_C5CF12 CBS domain containing protein n=1 Tax=Kosmotoga ... 207 5e-52 UniRef50_Q1YQK0 Poly(A) polymerase n=1 Tax=gamma proteobacterium... 207 6e-52 UniRef50_Q6MEY5 Putative poly A polymerase n=2 Tax=Parachlamydia... 207 7e-52 UniRef50_A6TJG8 Polynucleotide adenylyltransferase/metal depende... 206 1e-51 UniRef50_Q2B3W5 TRNA nucleotidyltransferase n=1 Tax=Bacillus sp.... 206 1e-51 UniRef50_B9Y2T0 Putative uncharacterized protein n=1 Tax=Holdema... 206 1e-51 UniRef50_Q7NCQ4 PolyA polymerase n=1 Tax=Gloeobacter violaceus R... 206 1e-51 UniRef50_B0BS81 PolyA polymerase n=23 Tax=Gammaproteobacteria Re... 205 2e-51 UniRef50_UPI00016C46B5 metal dependent phosphohydrolase n=1 Tax=... 205 3e-51 UniRef50_C6N7M1 Poly(A) polymerase (PAP) (Plasmid copy number pr... 205 3e-51 UniRef50_D0KJD5 Poly(A) polymerase n=10 Tax=Enterobacteriaceae R... 205 3e-51 UniRef50_Q0FDP1 Poly A polymerase family protein n=1 Tax=Rhodoba... 205 3e-51 UniRef50_UPI0001698637 polynucleotide adenylyltransferase/metal ... 204 4e-51 UniRef50_B8EDX6 Poly(A) polymerase n=5 Tax=Shewanella RepID=B8ED... 204 4e-51 UniRef50_C6E8T1 Poly(A) polymerase n=3 Tax=Geobacter RepID=C6E8T... 204 4e-51 UniRef50_Q6MM27 Poly A polymerase n=1 Tax=Bdellovibrio bacteriov... 204 4e-51 UniRef50_Q834S5 CCA-adding enzyme n=40 Tax=Bacilli RepID=CCA_ENTFA 204 6e-51 UniRef50_A4W0U8 CCA-adding enzyme n=68 Tax=Streptococcaceae RepI... 204 6e-51 UniRef50_A4J3L2 Polynucleotide adenylyltransferase region n=4 Ta... 204 6e-51 UniRef50_B5ELD4 Polynucleotide adenylyltransferase region n=2 Ta... 204 7e-51 UniRef50_C6CUG0 Polynucleotide adenylyltransferase region n=1 Ta... 204 8e-51 UniRef50_C9RRD1 Polynucleotide adenylyltransferase region n=1 Ta... 203 9e-51 UniRef50_A4J0V4 Metal dependent phosphohydrolase n=1 Tax=Desulfo... 203 9e-51 UniRef50_A9BI97 CBS domain containing protein n=1 Tax=Petrotoga ... 203 9e-51 UniRef50_A8FEH9 CCA-adding enzyme n=5 Tax=Bacillus RepID=CCA_BACP2 203 9e-51 UniRef50_B8KRY4 Poly(A) polymerase n=1 Tax=gamma proteobacterium... 203 1e-50 UniRef50_C6ACD6 tRNA nucleotidyltransferase n=2 Tax=Bartonella R... 203 1e-50 UniRef50_A5IJ71 CBS domain containing protein n=5 Tax=Thermotoga... 202 1e-50 UniRef50_C6NWQ8 Poly(A) polymerase n=1 Tax=Acidithiobacillus cal... 202 2e-50 UniRef50_B1HTF3 CCA-adding enzyme n=2 Tax=Bacillaceae RepID=B1HT... 202 2e-50 UniRef50_B5ES11 Poly(A) polymerase n=8 Tax=Proteobacteria RepID=... 202 3e-50 UniRef50_C0GDZ3 CBS domain containing protein n=1 Tax=Dethiobact... 201 3e-50 UniRef50_C8NF31 Poly A polymerase n=2 Tax=Granulicatella RepID=C... 201 5e-50 UniRef50_C1ZGH1 tRNA nucleotidyltransferase/poly(A) polymerase n... 200 6e-50 UniRef50_Q8EQD6 CCA-adding enzyme n=1 Tax=Oceanobacillus iheyens... 200 6e-50 UniRef50_B4UMC4 Poly(A) polymerase n=4 Tax=Anaeromyxobacter RepI... 200 7e-50 UniRef50_C4L927 Poly(A) polymerase n=2 Tax=Gammaproteobacteria R... 200 8e-50 UniRef50_Q04F51 tRNA nucleotidyltransferase/poly(A) polymerase n... 200 9e-50 UniRef50_A5N3S2 TRNA nucleotidyltransferase-related protein n=3 ... 200 9e-50 UniRef50_B8FTI8 Polynucleotide adenylyltransferase region n=2 Ta... 199 1e-49 UniRef50_A5G663 Polynucleotide adenylyltransferase region n=1 Ta... 199 2e-49 UniRef50_B5JS56 Poly(A) polymerase n=1 Tax=gamma proteobacterium... 199 2e-49 Sequences not found previously or not previously below threshold: >UniRef50_Q65Q41 Phosphatase n=50 Tax=Gammaproteobacteria RepID=CCA_MANSM Length = 419 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 244/415 (58%), Positives = 308/415 (74%), Gaps = 5/415 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ YLVGGAVRD LL LPVKDRDWVVVG+TP+++L GYQQVGRDFPVFLHP+T EEYAL Sbjct: 1 MQTYLVGGAVRDQLLNLPVKDRDWVVVGATPEQLLSLGYQQVGRDFPVFLHPKTKEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG+GYTGF C +P ++LE DL RRDLTINA+AQD+ G+ IDPY G+ DL+NR Sbjct: 61 ARTERKSGAGYTGFICDFSPHISLEQDLIRRDLTINAIAQDNQGKFIDPYEGISDLKNRT 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH+SPAF EDPLRVLRVARFAARY L F IA ET+ALM E+T GEL+ LT ERVW+E Sbjct: 121 LRHISPAFAEDPLRVLRVARFAARYHQLDFSIAPETIALMAEITEKGELQQLTIERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 TE AL +NP+++FQVL GAL++LFPE+ AL+GVP PA++HPEID+ +HT++ L A Sbjct: 181 TEKALKEKNPEIYFQVLLQVGALKILFPELYALYGVPNPAQYHPEIDSFLHTMLVLQQAV 240 Query: 241 MLSPQVD-----VRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 L+ + VRFA +CHDLGK LTP ++ P H+GH AG++ + L RL+VP + Sbjct: 241 RLTENTEFNKSAVRFAAICHDLGKALTPKDILPHHYGHEKAGIQPIRTLSNRLKVPTYYK 300 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 +LA E+H IH L P+T++KLF+ +D WRKPQR E+L L AD RGRTGFE Sbjct: 301 ELAEFTCEYHSYIHKAFELKPETVIKLFNKLDVWRKPQRFEELMLVCVADTRGRTGFEQT 360 Query: 356 DYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPK 410 YPQ +LR+ ++ A V + V+E GF+ IR+ELTRRR AV + K + P+ Sbjct: 361 AYPQKDYLRQLYQTALQVNVQQVIEDGFEKQGIRDELTRRRTIAVKTKKAEILPR 415 >UniRef50_Q1LSL7 Phosphatase n=12 Tax=Gammaproteobacteria RepID=CCA_BAUCH Length = 412 Score = 489 bits (1259), Expect = e-137, Method: Composition-based stats. Identities = 264/407 (64%), Positives = 327/407 (80%), Gaps = 3/407 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD LL +PVK+RDWVV+G+T Q+ML AGYQQVG+DFPVFLHP++HEEYAL Sbjct: 1 MKKYLVGGAVRDRLLQIPVKERDWVVIGTTLQDMLKAGYQQVGKDFPVFLHPKSHEEYAL 60 Query: 61 ARTERKSGSG-YTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 AR E+KS +G YTGFT A+ ++TLE+DLKRRDLTINA+A D+NG +IDPYNG DL R Sbjct: 61 ARIEKKSATGGYTGFTYKASSEITLEEDLKRRDLTINAIACDENGSLIDPYNGQRDLNQR 120 Query: 120 LLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 LRHVS AF EDPLRVLRVARFAA+ A+L FRI ET +M+ M EL L+PER+WK Sbjct: 121 WLRHVSEAFCEDPLRVLRVARFAAQLAYLNFRIVPETRLMMQHMI--SELPLLSPERIWK 178 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMA 239 ETE AL TR+PQ++FQVLRDCGAL+ LFPEIDALFGVPAPAKWHPEIDTGIHT+MT++MA Sbjct: 179 ETEKALATRDPQIYFQVLRDCGALKTLFPEIDALFGVPAPAKWHPEIDTGIHTMMTVAMA 238 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 A LS + VRFA+LCHD+GKGLTP + WP HHGHGPAG+ LV+ LCQRLRVPN IR+LA Sbjct: 239 ARLSDSIAVRFASLCHDIGKGLTPRDHWPSHHGHGPAGIPLVQSLCQRLRVPNSIRNLAI 298 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 +V E+HDL+H L PKT++KLF +ID WR+P+R+EQ+ + SEAD RGR G+E+ Y Sbjct: 299 IVTEYHDLLHYAVKLKPKTLIKLFYAIDVWRRPERLEQIIIISEADARGRAGYENHFYKP 358 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 G+++REA+ +A S+ V+ G +I E+L + R A+A+WK+Q Sbjct: 359 GQFIREAYRIASSIMPCQVISHNLTGNKIGEKLRQYRQQAIATWKQQ 405 >UniRef50_C6N613 tRNA nucleotidyltransferase n=2 Tax=Legionella RepID=C6N613_9GAMM Length = 425 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 214/408 (52%), Positives = 273/408 (66%), Gaps = 6/408 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK+YLVGGAVRD LL LPVK+RDWVVVG++P+++L ++QVGRDFPVFLHPQT+EEYAL Sbjct: 16 MKVYLVGGAVRDQLLNLPVKERDWVVVGASPEQLLKQKFRQVGRDFPVFLHPQTNEEYAL 75 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKS GY GF C VTLE+DL RRDLTINA+A D+ G +IDPY G DL NR+ Sbjct: 76 ARTERKSAPGYYGFACDFNRSVTLEEDLARRDLTINAMAMDEQGVLIDPYQGQRDLANRV 135 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH+SPAF EDP+RVLR+ARFAAR+ +LGF +A+ET +LM M GEL HL ERVW+E Sbjct: 136 LRHISPAFAEDPVRVLRLARFAARFHYLGFTVAEETRSLMYSMVTQGELAHLVAERVWQE 195 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 + +L +NP+ F LR C ALRV+ PE+ ALFGVP P ++H EID+G+HTL+ L AA Sbjct: 196 WQRSLEEKNPEQFIITLRSCDALRVILPELQALFGVPNPYRYHHEIDSGVHTLLVLQSAA 255 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 L+ +RFA L HDLGK +P WP H+GH GV ++E LC RLR+PNE R LA + Sbjct: 256 ALTTDPIIRFAALTHDLGKATSPMSNWPSHYGHEARGVPIIESLCLRLRIPNEYRTLATV 315 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 V+ FH +IH L TIV+L + A+R+PQ + + +AD G DY Q Sbjct: 316 VSRFHLMIHRLLELRADTIVRLLEQAYAFRRPQLFYNMLIACQADAEGCGREI--DYQQS 373 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVA----SWK 404 V + ++ G+ G I+ L + R+A V SWK Sbjct: 374 ALWHHLLAECAKVNVQTIITQGYTGGAIKHALHQHRVACVELILNSWK 421 >UniRef50_A1W3D0 Phosphatase n=492 Tax=cellular organisms RepID=CCA_ACISJ Length = 425 Score = 459 bits (1182), Expect = e-128, Method: Composition-based stats. Identities = 221/423 (52%), Positives = 277/423 (65%), Gaps = 13/423 (3%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IY+VGGAVRD LLG PV D DWVVVG+TP +M+ GY VGRDFPVFLHP+T EEYAL Sbjct: 1 MQIYMVGGAVRDRLLGRPVNDHDWVVVGATPDDMVARGYLPVGRDFPVFLHPETREEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA----QDDNGEIIDPYNGLGDL 116 ARTERKSG GY GF +PDVTLE+DL RRDLTINA+A ++ DPY G DL Sbjct: 61 ARTERKSGRGYRGFVVQTSPDVTLEEDLSRRDLTINAIAASAAWTGAEDLFDPYGGARDL 120 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 Q R+LRHV+ +F EDP+R+LRVARFAAR+ F +A ET+ LMREM H GE +HL PER Sbjct: 121 QARVLRHVTDSFREDPVRILRVARFAARFT--DFTVAPETMQLMREMVHDGEADHLVPER 178 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 VW+E L P F VLRDCGAL V+ PE++ L+GVP ++HPE+DTG+H +M L Sbjct: 179 VWQELARGLMEPQPSRMFDVLRDCGALAVVLPEVERLWGVPQRPEYHPEVDTGVHLMMVL 238 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 MAA L + VRFA L HDLGKG TP ++ PRH GH +L++ +C+RLRVP E R+ Sbjct: 239 DMAAHLQAPLTVRFACLTHDLGKGTTPHDVLPRHIGHEQRSARLLKAVCERLRVPVECRE 298 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 LA +VA H IH L +V+L + DA RKP R++++ L E D RGR GF Sbjct: 299 LADVVAREHGNIHRSGDLGAAALVRLLERCDAIRKPARLDEILLACECDARGRLGFADRP 358 Query: 357 YPQGRWLREAWEVAQSVPTKAV----VEAGFKGVEIREELTRRRIAAVASW---KEQRCP 409 YPQ + A QSV T +V + G G ++ E + R+ AVA W Q P Sbjct: 359 YPQRARINAALAAVQSVTTSSVAAHAAQLGLSGPKVGEMIHAARVQAVADWLHATAQPAP 418 Query: 410 KPE 412 +P+ Sbjct: 419 EPQ 421 >UniRef50_A3NQD4 Phosphatase n=74 Tax=Bacteria RepID=CCA_BURP0 Length = 413 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 218/410 (53%), Positives = 274/410 (66%), Gaps = 11/410 (2%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIY VGGA+RDALLGLPV+DRD+VVVG+TP++M ++ VG+DFPVFLHP THEEYAL Sbjct: 1 MKIYAVGGAIRDALLGLPVRDRDYVVVGATPEQMAAQRFRPVGKDFPVFLHPDTHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA--QDDNGEII----DPYNGLG 114 ARTERK+ +GY GF Y APDVTLE DL RRDLTINA+A +G ++ DP+ G Sbjct: 61 ARTERKTAAGYHGFQFYYAPDVTLEQDLVRRDLTINAMAREVSPDGALVGPVVDPFGGQA 120 Query: 115 DLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 DL+ +L RHV AF EDP+R+LRVARFAAR+A F +A +T ALMR M AGE++ L P Sbjct: 121 DLRAKLFRHVGDAFVEDPVRILRVARFAARFAE--FAVAPDTAALMRAMVDAGEVDALVP 178 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ERVW+E L P F VLR+CGAL + PEIDALFGVP A +HPE+DTG+H +M Sbjct: 179 ERVWQELARGLMEAKPSRMFAVLRECGALARILPEIDALFGVPQRADYHPEVDTGVHVMM 238 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + AA + VRFA L HDLGK TP ++ PRH GH V L++ LC+RLRVPNE Sbjct: 239 VIDHAAKQGYSLAVRFAALTHDLGKATTPADVLPRHIGHEGRSVDLLKPLCERLRVPNEC 298 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 RDLA +VA H +H + +V+L + DA RKP R + SEAD RGR G E+ Sbjct: 299 RDLALVVAREHGNLHRVMEMGAAALVRLLERADALRKPARFAEALQASEADARGRLGLET 358 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEAGFKG--VEIREELTRRRIAAVAS 402 YPQ LR+A A++V A + G G +I++ + R R+ AVA Sbjct: 359 KPYPQAERLRQALVAARAVDAGA-IAQGLAGEPAKIKDAVHRARVRAVAQ 407 >UniRef50_Q7U350 CCA-adding enzyme n=2 Tax=Candidatus Blochmannia RepID=CCA_BLOFL Length = 411 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 194/413 (46%), Positives = 270/413 (65%), Gaps = 3/413 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD+LL LP+ ++DWV+ GS+ QEML GY+QVG+DFPVFLHP++HEEYAL Sbjct: 1 MKKYLVGGAVRDSLLNLPITEKDWVITGSSAQEMLSIGYEQVGKDFPVFLHPKSHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK GSGYTGF C+ P +T+E+DL RRDLTINA+A D NG ++DPYNG D+Q RL Sbjct: 61 ARTERKLGSGYTGFICHTEPSITIEEDLYRRDLTINAMAYDMNGNLLDPYNGQKDIQLRL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRVLRVARFAA+ ++GF IA ET +M M H EL+ L+PERVW E Sbjct: 121 LRHVSNAFYEDPLRVLRVARFAAKLKNIGFTIAIETFEIMTHMIH--ELKSLSPERVWME 178 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI-DTGIHTLMTLSMA 239 T+ AL T NPQV+FQVL+ CGAL++LFPE+D LF +P H + + G T+ LS Sbjct: 179 TKKALITDNPQVYFQVLKKCGALKILFPELDILFTIPQCTTHHSNLMNLGNQTMTRLSNI 238 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 + LS + +R+A LC +LG + P + + + ++ LC RL+VPN I L + Sbjct: 239 SCLSNDLAIRYAILCCNLGSEMNPRKQPLKQLTQKKPQISIINNLCNRLKVPNNILKLTK 298 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 +V ++ ++ L+ + I+ +F + D WR P R+E + +++ + G + + Q Sbjct: 299 IVFMYYHDLYDVTKLSSEMIMTIFQAFDCWRTPTRIELIIKINQSQLLGSKFHINYLFFQ 358 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPKPE 412 LR A+ + ++ +GF G+ I +EL RR+ + WK + + Sbjct: 359 STLLRTAFNETTQIKANDIINSGFSGINISQELYSRRLHVLKHWKNKFLTHKQ 411 >UniRef50_A8PL05 Multifunctional CCA protein n=1 Tax=Rickettsiella grylli RepID=A8PL05_9COXI Length = 399 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 200/403 (49%), Positives = 264/403 (65%), Gaps = 8/403 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IYLVGGAVRD LLG P+K+RD+VVVG++P EML G++ +G+DFPVFLHPQTHEEYAL Sbjct: 1 MEIYLVGGAVRDQLLGFPIKERDYVVVGASPAEMLKQGFRLIGKDFPVFLHPQTHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK G GY GF+CYAAPDVTLE+DLKRRDLTINALAQ +NGEIIDP+ G D++N+L Sbjct: 61 ARTERKIGPGYKGFSCYAAPDVTLEEDLKRRDLTINALAQTNNGEIIDPFQGQKDIENKL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDP+R+LRVARF AR++ GFR+A ET+ALM+ M GE+ L PERVW+E Sbjct: 121 LRHVSPAFSEDPVRILRVARFMARFSSFGFRVAKETMALMKMMVSMGEVHALVPERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 ALT +PQ F + L DCGAL VLFPE+ L A K H + + H L L A Sbjct: 181 FSIALTEPSPQAFIKTLEDCGALAVLFPELYELHTHDASIKVHSQQLSPPHYLSVLEKAV 240 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +L+ +VRFA L DLGKG+ E GV+ + LCQR R+P+ LA + Sbjct: 241 LLTSDPEVRFAALLCDLGKGVANEET--------QKGVQKIRSLCQRYRIPHAYASLAMM 292 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 A +H L H L ++ L + +A ++ ++Q L EAD R +G + Y Q Sbjct: 293 AAAYHLLCHRALALEASSLYHLLEKTNALKQSSCLDQFLLVCEADFRAYSGLDHRVYLQR 352 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASW 403 + A E+ + + + ++G G + ++L RI A++ + Sbjct: 353 ERVLAAVEIVKKISASELKKSGLMGAALGKKLREHRIQALSDF 395 >UniRef50_A6FG51 Putative tRNA nucleotidyltransferase n=1 Tax=Moritella sp. PE36 RepID=A6FG51_9GAMM Length = 386 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 216/406 (53%), Positives = 269/406 (66%), Gaps = 20/406 (4%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IYLVGGAVRD LL LPVKD+D+VVVG+TP EML GYQQVG+DFPVFLHP + +EYAL Sbjct: 1 MQIYLVGGAVRDKLLSLPVKDKDFVVVGATPAEMLAQGYQQVGKDFPVFLHPNSKQEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSGSGYTGFTCYAAPDVTLE DL RRDLTINA+ +D++G +IDP N DL NRL Sbjct: 61 ARTERKSGSGYTGFTCYAAPDVTLEQDLVRRDLTINAMVEDEHGHVIDPLNARLDLDNRL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH+S +F EDPLRVLRVARFAAR+ LGF IA ETL LM+EMT AG+L LTPERVW+E Sbjct: 121 LRHISESFSEDPLRVLRVARFAARFHQLGFTIAKETLTLMQEMTQAGDLAELTPERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E L+ NP+VFFQVLR+ GAL V+ PE+DALF + + G L L +A Sbjct: 181 VEKTLSADNPEVFFQVLREIGALAVILPELDALFNLAVKNSENDSTSIGQQALTQLKQSA 240 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 LS + VRFA L L H ++ L +R +VPNE RDLA Sbjct: 241 SLSTDLAVRFAALMQQLD--------------HHQIS---IKALAKRCKVPNEHRDLALQ 283 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 V+ + IH L+P I++LFD+ DAWRKP R +Q+ LT + DY Sbjct: 284 VSAQQENIHNARSLDPADIIRLFDNTDAWRKPARFQQILLTC---ASSQVSKLVDDYQPT 340 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 ++L A + + ++ AGF+G EI+++LT +RIAA+ + Q Sbjct: 341 QYLTTMLNAACDIAVQPIIAAGFRGAEIKQQLTTQRIAALTLLRSQ 386 >UniRef50_Q3IK69 tRNA nucleotidyl transferase n=2 Tax=Alteromonadales RepID=Q3IK69_PSEHT Length = 416 Score = 416 bits (1069), Expect = e-115, Method: Composition-based stats. Identities = 188/408 (46%), Positives = 256/408 (62%), Gaps = 12/408 (2%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 ++YLVGGAVRD LL D D+VV+G TPQ M G+ +G DFPV+LHP+T EEYAL Sbjct: 7 QVYLVGGAVRDLLLKRASNDNDYVVIGETPQTMEALGFVPIGSDFPVYLHPKTKEEYALG 66 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 RTERKSG GYTGF A+PDVTLE+DL RRDLTIN++A D N IIDP+NG DL++++L Sbjct: 67 RTERKSGKGYTGFVVDASPDVTLEEDLARRDLTINSMALDANDNIIDPFNGQQDLKDKIL 126 Query: 122 RHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKET 181 RH + AF EDP+RVLR+ARF AR+ +RI T ALM+++ GEL HL PERVW ET Sbjct: 127 RHTTDAFVEDPVRVLRIARFLARFGS-EWRIHPSTYALMQQLKQQGELNHLVPERVWLET 185 Query: 182 ESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAM 241 E AL ++P+++FQ L+ G +FPE++ + VP P + HPE D +HT++ L AA Sbjct: 186 EKALGEKHPELYFQALQGLG----IFPELEKMVNVPQPKQHHPEGDVFVHTMLVLRRAAD 241 Query: 242 LSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLV 301 L+ + RFA L HD GK ++ + GH GV +VEQ C+RL++PN RD+ L Sbjct: 242 LNFDLATRFAALTHDFGKAISFKK-RGNLRGHERDGVAVVEQFCERLKIPNCFRDIGVLT 300 Query: 302 AEFHDLIHTFPMLNPKTIVKLF-DSIDAWRKPQRVEQLALTSEADVRGRT-GFESADYPQ 359 ++ H L HT L P+T+ KL +++A PQR + D +GR YPQ Sbjct: 301 SDNHTLCHTLEQLRPETVHKLIVTNLNALVHPQRFIAFTQACQCDAQGRGETLVDKPYPQ 360 Query: 360 GRWLR----EAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASW 403 LR E ++ + +A + +G KG EI EE+ + I V ++ Sbjct: 361 AAKLRAIHAELLKLDKKQVVQAALNSGKKGPEIGEEVKQAEINCVKAF 408 >UniRef50_Q125I3 Metal dependent phosphohydrolase n=2 Tax=Proteobacteria RepID=Q125I3_POLSJ Length = 462 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 217/463 (46%), Positives = 278/463 (60%), Gaps = 54/463 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IY+VGGAVRDAL+GL V+D DWVVVG+TP++++ GYQ VG+DFPVFLHP+T EEYAL Sbjct: 1 MQIYMVGGAVRDALMGLAVQDHDWVVVGATPEDLVAQGYQPVGKDFPVFLHPETREEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA--------------------- 99 ARTERK+ GY GF +A P VTLE DL RRDLTINA+A Sbjct: 61 ARTERKTARGYRGFVVHADPGVTLEQDLARRDLTINAIAAPARSTGAAAGAAARPGAALN 120 Query: 100 --QDDNGE-IIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADET 156 D + + +IDPY G D+++++LRHV+ AF EDP+R+LR+ARFAAR+A F +A ET Sbjct: 121 TDFDADFDALIDPYGGQKDIRDKVLRHVTEAFREDPVRILRLARFAARFA--DFSVAPET 178 Query: 157 LALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGV 216 LALMR+M GE++ L PERVW+E L P F VLRDCGAL L PE+ L+GV Sbjct: 179 LALMRDMVTEGEVDALVPERVWQELARGLMEDKPSRLFDVLRDCGALHRLLPEVARLWGV 238 Query: 217 PAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT-------------- 262 P A+ HPE+DTG+H +M + MAA L + VRFA LCHDLGKG T Sbjct: 239 PQRAEHHPEVDTGVHLMMVMDMAAQLQASLPVRFACLCHDLGKGTTRAPDAGMSTPGEPP 298 Query: 263 PPELW----------PRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFP 312 PPE W RH GH +L++ +C+RLRVP + R+LA +VA H IH Sbjct: 299 PPEFWREKMASDPQLGRHIGHEERSARLLKDVCERLRVPVDCRELADVVAREHGNIHGSA 358 Query: 313 MLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQS 372 +V+L + DA+RKP+R ++ L E D RGR G+E + YPQ L EA AQS Sbjct: 359 AFGAAAVVRLLERCDAFRKPRRFAEVLLACECDARGRLGYEHSPYPQRPRLLEALAAAQS 418 Query: 373 VPTKAVVEAGFKGV----EIREELTRRRIAAVASWKEQRCPKP 411 V T V +I E + + R+AAV P Sbjct: 419 VATHQVAADAQAAGQDGRQIGELIHQARVAAVGEIPGFAAGSP 461 >UniRef50_A6VN94 CCA-adding enzyme n=4 Tax=Pasteurellaceae RepID=CCA_ACTSZ Length = 400 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 204/409 (49%), Positives = 263/409 (64%), Gaps = 16/409 (3%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M IYLVGGAVRD LL LPVKDRDW+VVGSTP E+L GY QVG+DFPVF+HP+THEEYAL Sbjct: 1 MNIYLVGGAVRDQLLHLPVKDRDWLVVGSTPDELLSLGYLQVGKDFPVFIHPETHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE+KSGSGYTGF C +PD+TLEDDL RRDLTINA+AQD NG++ DPY+G+ DL NRL Sbjct: 61 ARTEKKSGSGYTGFICDFSPDITLEDDLIRRDLTINAIAQDKNGKLYDPYHGIEDLNNRL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH+SP+F EDPLRVLRVARFAA++ HLGF IA ETL LM++++ GEL+HLT ERVW E Sbjct: 121 LRHISPSFEEDPLRVLRVARFAAKFYHLGFAIAPETLELMKKLSTQGELQHLTAERVWLE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 TE AL T NP+++FQ L AL L PE+ + ++ + + L A Sbjct: 181 TEKALMTENPEIYFQTLLKIDALPALMPELATI-----------SVENFQYAMTALKNAV 229 Query: 241 MLSPQVDVRFATLCH---DLG-KGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 L +D + +C LG + P + + + L ++L+VP ++ Sbjct: 230 SLIKNMDCNKSAVCFATIFLGIIYVNPSHMTQKQQEQDNHQKNITPCLFEKLKVPAYHKE 289 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 LA L ++H IH L TI+ LF+ D WRKPQR +L + A ++ Sbjct: 290 LAILAGKYHIYIHNAFNLKSHTIIDLFNKWDVWRKPQRFLELLIVCAAHYSAQSK-NQPT 348 Query: 357 YPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKE 405 YPQ +L ++ A ++ K +V AGFK EIR ELTR+RI+AV K Sbjct: 349 YPQKSYLLGLYQKAMTIDVKNIVSAGFKKTEIRNELTRQRISAVEKIKN 397 >UniRef50_Q8D2W4 CCA-adding enzyme n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=CCA_WIGBR Length = 403 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 172/400 (43%), Positives = 267/400 (66%), Gaps = 5/400 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD LL +P+K++DWVVV STP+EM+ GY+ VG+ FPVFLHP++HEE+AL Sbjct: 1 MKKYLVGGAVRDGLLNMPIKEKDWVVVESTPEEMIKLGYKPVGKSFPVFLHPKSHEEHAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK+G GY GF Y + +TLE+DLKRRDLTINA+A+D NG +IDPY G+ DL + Sbjct: 61 ARTERKNGYGYKGFKLYTSSKITLEEDLKRRDLTINAIAKDKNGNLIDPYGGIKDLYEKK 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 L+H+S +F EDPLRVLR ARFAA HL F I +TL +M EM EL + ER+W E Sbjct: 121 LKHISNSFKEDPLRVLRTARFAAYLFHLNFFIDSKTLKIMSEMI--DELFFIPVERIWLE 178 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 T+ AL RNP V+F+VL CGAL+ +FPEI+ LF + + ++ I+ G TL L ++ Sbjct: 179 TKKALLCRNPHVYFKVLLKCGALKKIFPEIENLFHI--KSFYNKNINLGSLTLRALYESS 236 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 ++S ++ +RF+ LCH+ K + + + G ++ ++C+RL++ NEI+ L+++ Sbjct: 237 LISNEIKIRFSMLCHNFDKFNSN-NKKNSFYCNKINGNLILNKICKRLKLSNEIKKLSKI 295 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + HD ++ ++ K ++K + I+AW+ P+ ++ L + S++ + + + Q Sbjct: 296 ALDHHDTLYKIFFISAKMVIKFLNDINAWKNPKIIDDLIIISKSYGISIGYKKKSMHKQE 355 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 ++++ ++ S+ TK +++ GF G+ I++EL +RR + Sbjct: 356 KFIKNLYKKLNSIKTKDIIKDGFIGINIKKELMKRRENII 395 >UniRef50_Q1IG27 CCA-adding enzyme n=7 Tax=Gammaproteobacteria RepID=CCA_PSEE4 Length = 375 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 200/406 (49%), Positives = 257/406 (63%), Gaps = 31/406 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IY VGGAVRD LLG PV D DW+VVG+T ++M G++ VG DFPVFLHP+T EEYAL Sbjct: 1 MQIYKVGGAVRDRLLGRPVSDVDWLVVGATVEQMQAQGFRPVGADFPVFLHPKTGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GY GFT +A+PDVTLE+DL RRDLTINA+A+D++G++ DPY+G DL R+ Sbjct: 61 ARTERKSGRGYGGFTFHASPDVTLEEDLIRRDLTINAMAEDEHGDLHDPYHGKTDLDQRI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRVLRVARFAARYA +GFR+ADETL LMR+++ +GEL LT ER WKE Sbjct: 121 LRHVSLAFAEDPLRVLRVARFAARYAPMGFRVADETLELMRQISASGELLALTAERSWKE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E AL PQVF +VLR CGAL+ L PE+DALF H E+ G H L L AA Sbjct: 181 IERALMEDQPQVFIEVLRACGALKELMPEVDALF--------HGEVSQGSHALDVLQQAA 232 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + VR+A L L G K ++ + QR + P E ++LA L Sbjct: 233 AQQQPLAVRWACLLLAL-------------------GGKQIKTVNQRFKAPRECQELAIL 273 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 V EFH+ H L P+ ++ L D +R+PQR E+ D DYPQ Sbjct: 274 VGEFHEQGHRAMELAPEMLLDLLQKFDVYRRPQRFEEFIEACRMDAL----LGGRDYPQS 329 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 +LR A A++V K ++E+G G + L R++A+ ++K + Sbjct: 330 EYLRGAAATARAVDVKPLMESGLTGQALGGALKAARLSALQAYKAR 375 >UniRef50_Q058D0 CCA-adding enzyme n=2 Tax=Buchnera aphidicola RepID=CCA_BUCCC Length = 414 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 177/411 (43%), Positives = 261/411 (63%), Gaps = 4/411 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGST-PQEMLDAGYQQVGRDFPVFLHPQTHEEYA 59 MKIYLVGGA+RD LL +PV+DRDWVVVG P+EML YQQVG+ FPVF+HP+THEEY+ Sbjct: 1 MKIYLVGGAIRDRLLNIPVRDRDWVVVGIRDPKEMLKKNYQQVGKGFPVFIHPKTHEEYS 60 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 LARTE+K+G G+TGF + +TL++DLKRRDLTINA+AQD +G+IID +NG D+Q + Sbjct: 61 LARTEKKNGVGHTGFLFDFSSRITLKEDLKRRDLTINAIAQDSSGKIIDFFNGKKDIQKK 120 Query: 120 LLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 +LRHVS +F EDPLRVLR+ARFAA +HLGF IA +TL+LM+ + EL +LTPER+WK Sbjct: 121 ILRHVSYSFQEDPLRVLRIARFAALLSHLGFYIAKKTLSLMKLICSRKELLYLTPERIWK 180 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEID-ALFGVPAPAKWHPEIDTGIHTLMTLSM 238 ET+ L+T+NP V+FQVL C AL LFPEI+ + I+ ++L+ LS Sbjct: 181 ETQKGLSTQNPHVYFQVLYSCNALFFLFPEINYFYKKTYFLNSFIKHINLVQYSLIELSK 240 Query: 239 AAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLA 298 + ++ +++RF+ P + + + L++++ RL++P E ++ Sbjct: 241 ISKVTKDINIRFSYFLQFFYYVYPIPNIGTKDYFFYKKPAFLLKKMLIRLKIPKETSEII 300 Query: 299 RLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYP 358 + FH+ + + + K I+K F+ ID WRKP R+ QL + ++ D+ Sbjct: 301 FFLCGFHNFLQNINIQSSKLIIKFFNIIDVWRKPNRLNQLIYLDFYNFNSLKNKKN-DFF 359 Query: 359 QGRWLREAWEVAQSVPTKAVV-EAGFKGVEIREELTRRRIAAVASWKEQRC 408 G+ L+ + + + + + + E FKG+EI+ +L R RI + KE+ Sbjct: 360 LGKLLKYMFSLIKDISVCSFIKEKKFKGIEIKNDLNRLRIQSFKEMKEKII 410 >UniRef50_B8D8L9 CCA-adding enzyme n=4 Tax=Buchnera aphidicola RepID=CCA_BUCA5 Length = 414 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 193/407 (47%), Positives = 258/407 (63%), Gaps = 6/407 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIYLVGGAVRD+LL LPVKD+DWVVVG T + +L+ +QQVG+DFPVFLHP+THEEYAL Sbjct: 1 MKIYLVGGAVRDSLLNLPVKDKDWVVVGGTEKILLERNFQQVGKDFPVFLHPETHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR ERKSG GYTGF DVTLE+DL RRDLTINA+AQD+ G IDP+ G D++ L Sbjct: 61 ARKERKSGKGYTGFDTDCNSDVTLEEDLIRRDLTINAIAQDEYGNYIDPFQGKKDIECGL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 +RHVS +F EDPLRVLRVARFAA HLGF+IA+ET+ LM + EL +LT R+W E Sbjct: 121 IRHVSESFIEDPLRVLRVARFAATLVHLGFKIAEETMLLMCIIVKKQELSYLTSNRIWNE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALF---GVPAPAKWHPEIDTGIHTLMTLS 237 TE AL T NP V+FQVL +C AL FPE+ L+ + + + I LM L+ Sbjct: 181 TEKALKTLNPHVYFQVLYECNALHFFFPEMYFLYEKKNFLNRSFFKKFCNKNI-ILMGLA 239 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 ++L+ +DVRF+ LC L ++ +C+R ++P+ IRD+ Sbjct: 240 EISLLNKDIDVRFSYLCQFLSVNQIDRNYSKIFF--DSYAASIIHSVCKRFKIPSYIRDI 297 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY 357 A L F+ ++T + K I+ LF +DAWRKP RV++LA S + E Sbjct: 298 AVLNTGFYFFLNTIHYQSSKNIINLFSKVDAWRKPDRVKKLAFLSNFNFLRNFKSEFFCI 357 Query: 358 PQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWK 404 G +L + + V ++V K +++ GFKG EI++E+TR RI + W+ Sbjct: 358 KSGCFLEKCFSVVKNVSIKLILKKGFKGYEIKQEITRLRIKKLEFWR 404 >UniRef50_A9KEZ9 CCA-adding enzyme n=6 Tax=Coxiella burnetii RepID=CCA_COXBN Length = 376 Score = 358 bits (920), Expect = 1e-97, Method: Composition-based stats. Identities = 176/403 (43%), Positives = 236/403 (58%), Gaps = 44/403 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +K+YLVGGAVRD LLGLPVK++DWVVVG+TP+EM G++ VG++FPVFLHP+THEEYAL Sbjct: 16 LKVYLVGGAVRDQLLGLPVKEKDWVVVGATPEEMTARGFKPVGKEFPVFLHPETHEEYAL 75 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK GY GFT YAAPDV+LE+DLKRRDLTINA+A+ G++IDPY G DL+N++ Sbjct: 76 ARTERKVAKGYKGFTFYAAPDVSLEEDLKRRDLTINAIAETPEGQLIDPYGGQEDLKNKV 135 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDP+RVLR+AR A ++ F I +TL LM++M AGE++ L PERVW+E Sbjct: 136 LRHVSVAFQEDPVRVLRLARLATKFP--DFSIHPDTLELMKKMVCAGEIDALVPERVWQE 193 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 AL P FF VL CGAL +LFPEI + G + L Sbjct: 194 LNRALGNEKPTRFFTVLNQCGALAILFPEIK-MEGKG---------------MAALQSVT 237 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +P +RFATL DL +++++L R RVPNE DLA L Sbjct: 238 DKTPSPLIRFATLQSDL-------------------PPEIIQKLAGRYRVPNEYADLAIL 278 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 VA F ++ +++ DA R+ +R +Q T + S Q Sbjct: 279 VARFGSDYVNLNRMDETSLLNFLLKTDALRRQERFDQFIFTCDL-------ISSTTSSQP 331 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASW 403 + ++E + +SV K + E KG + L + R+ A+ + Sbjct: 332 KKIKEIIKAVKSVDIKPLQEKQLKGEAFAKALEKLRLEAIRTL 374 >UniRef50_Q2BK09 TRNA nucleotidyl transferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BK09_9GAMM Length = 370 Score = 358 bits (919), Expect = 2e-97, Method: Composition-based stats. Identities = 177/397 (44%), Positives = 241/397 (60%), Gaps = 41/397 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIYLVGGAVRD LL PV D+DWVVVGS+P+EM+++GYQ VG+DFPVF+HP+T EEYAL Sbjct: 1 MKIYLVGGAVRDKLLNYPVYDKDWVVVGSSPEEMIESGYQPVGQDFPVFIHPETGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE KSG GYTGF +A +VTLE+DL RRDLTINA+A D+ G ++DPY+G DL +R+ Sbjct: 61 ARTEMKSGKGYTGFNYFADKNVTLEEDLVRRDLTINAMAMDEQGSLVDPYDGQKDLADRI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLRVLRVARFA+RY HLGFR+A ETL LM+E+ ELEHLT ERVWKE Sbjct: 121 LRHVSPAFSEDPLRVLRVARFASRYNHLGFRVAQETLNLMQELALTDELEHLTTERVWKE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E ALT ++P VF +L A + + PE+++ D Sbjct: 181 FERALTEKSPWVFLSILHQTKASKKVLPELESWLDT----------DNWQ---SIFRNCC 227 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +S + D+RFA L A +K V C RLR ++L Sbjct: 228 EVSKEADIRFACLS-------------------TLADLKNVPAFCDRLRTQKATKELTMQ 268 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 A+ L+ TF +T +++ +D +R+PQR+E++ +A R + Sbjct: 269 CADHSALLSTFDSQPAETKLEILQGLDLFRRPQRLEKILSCVKALYREHST--------- 319 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRI 397 + L+ + + K +++ G+KG + +ELT+R++ Sbjct: 320 QSLQPILDEISKIDPKQLIKEGYKGAALGKELTQRKL 356 >UniRef50_B4RVV4 CCA-adding enzyme n=2 Tax=Alteromonas macleodii RepID=CCA_ALTMD Length = 397 Score = 356 bits (914), Expect = 9e-97, Method: Composition-based stats. Identities = 184/417 (44%), Positives = 241/417 (57%), Gaps = 32/417 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M++YLVGGAVRDALL V +RD+VVVG+TPQEML G+ QVG+DFPVFLHP+T EEYAL Sbjct: 1 MQVYLVGGAVRDALLNRKVIERDYVVVGATPQEMLSQGFTQVGKDFPVFLHPKTQEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GYTGF C A+ VTLE+DL RRDLT+NA+AQD+ G +IDPY G DL+N L Sbjct: 61 ARTERKSGKGYTGFVCDASSSVTLEEDLLRRDLTVNAIAQDNLGNLIDPYGGKKDLENHL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRV RVARFA RYA+LGF IA+ET+ALM+ M +GEL L+ ERVW+E Sbjct: 121 LRHVSEAFSEDPLRVFRVARFATRYAYLGFTIANETMALMQSMAESGELSTLSAERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 T+ +L + P VFF VL L F E++ +D I TL T A Sbjct: 181 TKRSLLEKTPHVFFTVLNQAHGLNDWFAELE------------SNLDAAIATLKT---AV 225 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHG-----------HGPAGVKLVEQLCQRLR 289 L F K L G + ++LC RL+ Sbjct: 226 ALENAAKENFDKSGQLENKPLETKIPESSSSGTTTLIIRFTALLAHLNEEEAKRLCNRLK 285 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 V N++ ++ L +F D + +P ++ LF+ DAWR+ +R L L + A Sbjct: 286 VQNQLSEIVILACKFKDFLLNTQN-SPADLLALFNGCDAWRRSERF-TLLLKAFAPYAH- 342 Query: 350 TGFESADYP-QGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKE 405 ++ D+ Q + A A V + ++ G KG I+E L + ++ A+AS E Sbjct: 343 --YKDLDWQRQQEHIENALSAANQVNVQDIIATGVKGPAIKEALNQAKLDAIASIGE 397 >UniRef50_A5WEX7 tRNA cytidylyltransferase n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WEX7_PSYWF Length = 413 Score = 350 bits (897), Expect = 7e-95, Method: Composition-based stats. Identities = 158/431 (36%), Positives = 223/431 (51%), Gaps = 47/431 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M++Y+VGGAVRD LL P D+D+VVVG+TP++M++AG+ QVG DFPVFLHP+T EEYAL Sbjct: 1 MQVYIVGGAVRDELLNRPYTDKDFVVVGATPEQMIEAGFIQVGADFPVFLHPKTKEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD---------DNGEIIDPYN 111 ARTERKSG GY GF YA+P+VT+E+DL RRDLTINA+A + GE+IDPY+ Sbjct: 61 ARTERKSGKGYKGFEVYASPEVTIEEDLLRRDLTINAMAIEVKSLWDSTPLTGEVIDPYD 120 Query: 112 GLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARY----AHLGFRIADETLALMREMTHAG 167 G D++N++LRHVS AF EDPLRVLR+ARF R+ A F IA +TLAL+ + + Sbjct: 121 GQSDIKNKMLRHVSEAFSEDPLRVLRIARFYGRFYDPKAEHNFSIAPDTLALIATINDSD 180 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 EL LT ERVW+ET AL P + L+ GAL +FP I G Sbjct: 181 ELACLTAERVWQETSRALMQDCPYAYLDCLQYMGALPHIFPSIANALGDDKIKAL----- 235 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLV------ 281 L +A L+ + R+A + L + + H H P + Sbjct: 236 ----VFQALQLAGQLNLSLQQRWAIIMLSLAQEVIDVLNPRHHSNHHPHQIDEALFSAWA 291 Query: 282 ---EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPML------NPKTIVKLFDSIDAWRKP 332 +Q+ L+VP + A A + +P L + ++ KL A + P Sbjct: 292 SKLKQVSHNLKVPKKTTQFAASYANCSGYLAAYPYLGQHSDSDANSLAKLIVLTKADKDP 351 Query: 333 QRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL 392 + +L + E D+ + A + + + ++ +G I L Sbjct: 352 SELHELIQLHKVIEMAWQQLEMTDFIK----------AYTQISMSDIDPDLQGSAIGTAL 401 Query: 393 TRRRIAAVASW 403 + RI A+A Sbjct: 402 SAARINAIAQI 412 >UniRef50_A0Y839 TRNA nucleotidyltransferase, putative n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y839_9GAMM Length = 367 Score = 348 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 182/402 (45%), Positives = 242/402 (60%), Gaps = 45/402 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD LLG P +RDWVVVG+T +++++ GYQ VG+DFPVFLHP+T EEYAL Sbjct: 1 MKNYLVGGAVRDKLLGYPYVERDWVVVGATAEQLINLGYQPVGKDFPVFLHPKTKEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GYTGF CYA+P+VTLE+DL+RRDLTINA+A+DD+G +IDPY G DL + Sbjct: 61 ARTERKSGPGYTGFDCYASPEVTLEEDLQRRDLTINAIAEDDDGTLIDPYGGQQDLDKGI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLR+LRVARF+ARYAHLGF +ADETL LM++++ + EL L ERVWKE Sbjct: 121 LRHVSPAFEEDPLRILRVARFSARYAHLGFTLADETLLLMKKISASDELLALPAERVWKE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 +L+ R+P +FF L+ C AL+ L PE+D F HT++ A Sbjct: 181 MHRSLSERSPDIFFVTLQQCDALKKLMPELDESF----------------HTIIEPLKQA 224 Query: 241 MLSPQVD-VRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 +S D + FA L + T E CQR++ P E RDLA Sbjct: 225 AISGLPDVICFAILFAHIDTVET-------------------ENFCQRMKAPREFRDLAI 265 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 LV+ F +P ++ L +S+D +R+P+R + + Sbjct: 266 LVSRFSISCKD-DFSSPDQLLTLLESLDPFRRPERFGLFLQSVQLLYNNDRAINQ----- 319 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVA 401 ++++ +S+ ++ G KG EI E L RRI A+ Sbjct: 320 ---MKKSLRACKSIDAASLAREGLKGKEIAEALRSRRIEAMT 358 >UniRef50_A0Z6Y3 TRNA nucleotidyltransferase, putative n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z6Y3_9GAMM Length = 372 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 176/402 (43%), Positives = 233/402 (57%), Gaps = 41/402 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIY VGGAVRD LLG P + DWVVVG TPQ ++D G++QVGRDFPVFLHP+T EEYAL Sbjct: 1 MKIYRVGGAVRDELLGYPHSETDWVVVGGTPQALVDQGFRQVGRDFPVFLHPETQEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GY GF +AAP VTLE+DL RRDLTINA+A DD+G ++DPY G DL+ + Sbjct: 61 ARTERKSGFGYHGFEVHAAPSVTLEEDLTRRDLTINAMAMDDDGVLVDPYGGKRDLEAKC 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSP F EDPLRVLRVARFAARY LGF +A+ETL LM + GEL HL ER+W E Sbjct: 121 LRHVSPHFVEDPLRVLRVARFAARYYALGFTVAEETLDLMSTIVAQGELGHLATERIWVE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 TE AL ++P+++F+ LR CGA+ L P + G+ LS AA Sbjct: 181 TERALGEQHPEIYFETLRQCGAMATLMPAVAVTSGIE-----------------RLSRAA 223 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + + D R+A L +L + + PN+ RDLA Sbjct: 224 QFTNRTDCRWAILLSEL-------------------PSNQARATSEARKAPNQFRDLAER 264 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + + + +P + L + +DA R+P+ + + A SA +P Sbjct: 265 LTTWRPQTKQ-ALRDPSECMSLLEGLDALRRPEPFDGFCEAAAA----LESNTSAKHPSC 319 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 L++A E A +V + ++E G G + + L R+AA+A+ Sbjct: 320 IALQQAKEAANTVKAQTLLETGLTGPALGKALRESRVAAIAA 361 >UniRef50_Q5QY23 CCA-adding enzyme n=1 Tax=Idiomarina loihiensis RepID=CCA_IDILO Length = 370 Score = 346 bits (888), Expect = 9e-94, Method: Composition-based stats. Identities = 178/402 (44%), Positives = 238/402 (59%), Gaps = 35/402 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M +YLVGGAVRD LL LPV +RDWVVVG+ +++L G+ QVG+DFPVFLHP T EEYAL Sbjct: 1 MDVYLVGGAVRDKLLKLPVHERDWVVVGARAEDLLKQGFLQVGKDFPVFLHPSTREEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG G+T F +A+PDVTLEDDL RRDLTINA+AQ ++GEI+DPYNG+ D++ R Sbjct: 61 ARTERKSGKGHTSFDVFASPDVTLEDDLARRDLTINAIAQSEDGEIVDPYNGVQDIKARK 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRVLRVARFAAR+AHL F +A+ET +++EM+ + EL HL PERVW+E Sbjct: 121 LRHVSEAFTEDPLRVLRVARFAARFAHLDFTVAEETQQMLQEMSASQELSHLVPERVWRE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E +L T+ P VF +LRD AL + P I A L L + Sbjct: 181 WEKSLLTQTPTVFLTLLRDIQALSQVLPGITA----------------DDSQLQRLQRTS 224 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 S V +RFA+L + ++Q C++L +PN RD A L Sbjct: 225 AYSDSVTLRFASLFI------------------EQETPESLKQFCRQLAIPNHYRDSALL 266 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 D I T + + L ID WR+P+++EQL +A+ + + + Q Sbjct: 267 ARNHEDFITTPELPEKAQLAALLKQIDYWRRPEKLEQLLQLRQAEY-SESKQQKSIAAQH 325 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 + LR E A ++ + + GF G + + L +R +A Sbjct: 326 KKLRSGAEKAAALNAGTLQQQGFTGKALGDALREQREQILAE 367 >UniRef50_A1U5G5 CCA-adding enzyme n=3 Tax=Alteromonadales RepID=CCA_MARAV Length = 373 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 175/405 (43%), Positives = 227/405 (56%), Gaps = 41/405 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ YLVGGAVRD LLGL VKDRDWVVVG+TP++M+ G++QVG DFPVFLHP T EEYAL Sbjct: 1 MQTYLVGGAVRDKLLGLGVKDRDWVVVGATPEDMIQRGFKQVGADFPVFLHPDTGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK G GY GF+ Y+APDV+LEDDL+RRDLTINA+A+ +NG+++DP+NG DL+ + Sbjct: 61 ARTERKQGRGYHGFSVYSAPDVSLEDDLRRRDLTINAMAETENGDLVDPFNGHADLEQKK 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLR+LR ARFAAR LGF I ET+ALMR+M +GEL L PERVW+E Sbjct: 121 LRHVSEAFAEDPLRILRTARFAARLQPLGFSICRETMALMRQMVTSGELGDLVPERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 + AL + P VFF VLR+ GAL+VL PE+ P L L Sbjct: 181 VQRALHEQAPGVFFDVLRELGALQVLIPELTD----EQP---------FRQGLSALQCIH 227 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +A L + ++ PN+ R+L L Sbjct: 228 RKQGSTAQHYAALL-------------------SGVPEPDAVARAKAMKSPNDCRELTHL 268 Query: 301 VAEFHDLIHTF---PMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY 357 V F ++ L P+ ++L D D WR+P R L T +S Sbjct: 269 VGLFMAQLNGASPETRLTPELAMELLDKADFWRRPDRFGVLLGTLAC------TLQSEPD 322 Query: 358 PQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 + L A AQSV ++ G +G + E + + R+A + Sbjct: 323 HLIQQLELAAHRAQSVTPHPFLQKGIQGKALGEAIRKERVARITE 367 >UniRef50_A3WPG7 TRNA nucleotidyltransferase n=1 Tax=Idiomarina baltica OS145 RepID=A3WPG7_9GAMM Length = 366 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 168/401 (41%), Positives = 225/401 (56%), Gaps = 43/401 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 + IYLVGGAVRD LLG PV D+D+VVVG+TP +ML GYQQVG+DFPVFLHPQT EEYAL Sbjct: 5 LDIYLVGGAVRDQLLGCPVGDKDYVVVGATPDQMLALGYQQVGKDFPVFLHPQTREEYAL 64 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK G GYTGF +TL DL+RRDLTINA+A+D++G +IDPY G D++ +L Sbjct: 65 ARTERKQGQGYTGFQVNTETTITLTQDLERRDLTINAIAEDEHGHLIDPYGGQQDIERKL 124 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLRVLRVARF AR+ LGF +A ET LM+ M +GEL+ L ERVW+E Sbjct: 125 LRHVSPAFVEDPLRVLRVARFYARFKPLGFTVAQETKNLMKAMARSGELKTLVAERVWRE 184 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E AL T P F ++L + A + PE+ ++ L + Sbjct: 185 WEKALATDAPAAFIELLVEIDAWSQVMPELT----------------ISPSSVSDLQQIS 228 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 ++ RFATL G + L Q+LR+PN+ + LA+ Sbjct: 229 QVTQCTHTRFATLMLRQGDTFE------------------INLLSQKLRLPNQYKRLAQA 270 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 V + L+P +++L + D WR+P+R+EQL + Sbjct: 271 VFGSRKWLLQPSPLSPAQLLELANGADMWRQPERIEQL---------AHIRHIARPNISD 321 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVA 401 + A A+S+ ++V G KG E+ + L R+ A+ Sbjct: 322 GCIVSALTQARSIDASSIVARGLKGPEVGQVLNEERLLAIK 362 >UniRef50_Q1QC26 Polynucleotide adenylyltransferase region n=2 Tax=Psychrobacter RepID=Q1QC26_PSYCK Length = 390 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 164/411 (39%), Positives = 229/411 (55%), Gaps = 33/411 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M++YLVGGAVRD LLG P+KD+D+VVVG+T EML+AG+QQVG DFPVFLHP EEYAL Sbjct: 1 MQVYLVGGAVRDQLLGRPIKDKDFVVVGATVTEMLEAGFQQVGADFPVFLHPVNREEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD---------DNGEIIDPYN 111 ARTERK G GY GF+ +A+ DV+L+DDL+RRDLTINA+A + +G++ID Y Sbjct: 61 ARTERKQGLGYQGFSVHASIDVSLKDDLQRRDLTINAMAIEVTSLTDDTPISGDVIDYYG 120 Query: 112 GLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 GL D++N+ LRHVS AF EDPLRVLR ARF +RY LGF IAD+TL LMRE+ +GEL H Sbjct: 121 GLQDIENKTLRHVSSAFNEDPLRVLRTARFYSRYYDLGFTIADDTLVLMRELVASGELTH 180 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 L+ ER+W+E+ A+ +PQV++Q L D GAL F + + Sbjct: 181 LSSERIWQESSRAMMQLSPQVYWQQLFDIGALAEYFAPLHQAWNDDQ---------LRET 231 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 +L A + + R+A + L P L+ H VK + + +VP Sbjct: 232 VQTSLYFAGQMHLNLSQRWALVMVSL-----KPSLFQNKHTEAITAVKSINDIGNMAKVP 286 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 A L + D + L+ + L + A ++P+++ QL +TS+ Sbjct: 287 KAQTQFASLFVQQADKLSVITQLSAAEKIDLIQACSAHKEPEKLSQLLVTSQVLQLS--- 343 Query: 352 FESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 Q R + A S+ ++ KG I + L + RI + + Sbjct: 344 ------IQHRQMMLALNSFHSIGMND-IDQSLKGPAIGKALRQCRIEHLQT 387 >UniRef50_B5JXP2 tRNA nucleotidyltransferase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXP2_9GAMM Length = 392 Score = 340 bits (872), Expect = 6e-92, Method: Composition-based stats. Identities = 168/409 (41%), Positives = 227/409 (55%), Gaps = 34/409 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IYLVGGAVRD LLGL VKDRDWVVVG+T ++ML GYQQVGR FPVFL PQ+ EE+AL Sbjct: 1 MQIYLVGGAVRDQLLGLDVKDRDWVVVGATAEDMLAQGYQQVGRQFPVFLDPQSKEEHAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE K G GY+GF +AAPDVTLE DL RRDLTINA+AQD G++ID + G DL + Sbjct: 61 ARTETKIGPGYSGFEVHAAPDVTLEQDLLRRDLTINAMAQDRQGQLIDEHAGQADLSAGV 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHL----GFRIADETLALMREMTHAGELEHLTPER 176 LRH+SPAF EDPLR+LRVARFAAR+ F +A ET L+ +M A E+E L+ ER Sbjct: 121 LRHISPAFREDPLRILRVARFAARFCQPLLARDFEVARETAQLLCKMVEANEVEALSKER 180 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLF-PEIDALFGVPAPAKWHPEIDTGIHTLMT 235 W+E E A+ P+ F +V+ CGAL+ L+ P + W + Sbjct: 181 AWQEFERAMGETQPRRFLEVMYQCGALQRLWAPAV-------QSDDW---SELWPRLREV 230 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 + LS +VRFA + G + L +++ P + Sbjct: 231 ADIVPALSASPEVRFAAII-------------------GVLPAPQAKLLSEQMGAPKRFK 271 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 LA LVA + + P ++ L + +DA+RKP+R++ L EA +R Sbjct: 272 QLAELVATHANTVKHSTRQPPPAVLNLLNKMDAFRKPERLDDALLACEAAIRSLPKERQR 331 Query: 356 DYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWK 404 PQ +L + A +V +++ +G + EE+ R AA+ K Sbjct: 332 PQPQREYLLSCYYAASAVTAADMMKLRLEGKALAEEIDTHRKAAIFKVK 380 >UniRef50_A6VU49 Polynucleotide adenylyltransferase region n=2 Tax=Marinomonas RepID=A6VU49_MARMS Length = 365 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 169/399 (42%), Positives = 230/399 (57%), Gaps = 48/399 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 ++YLVGGAVRDALL LPV D DWVV G+TP+++ G+QQVG+ FPVFLHP + EEYALA Sbjct: 6 QVYLVGGAVRDALLELPVIDHDWVVTGATPEQLEKKGFQQVGKQFPVFLHPISKEEYALA 65 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 R E+K G GYTGF C +P+++LE+DL+RRDLTINA+AQD NG +IDP+NG DL +R+ Sbjct: 66 RKEKKQGEGYTGFICDFSPEISLEEDLERRDLTINAIAQDQNGTLIDPFNGQQDLLDRVF 125 Query: 122 RHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKET 181 RHVS AF EDPLRVLRVARFAAR+ H GF IA ET++LMRE++ +GEL L+ ER+WKE Sbjct: 126 RHVSNAFVEDPLRVLRVARFAARFHHFGFTIAPETMSLMREISSSGELSALSAERIWKEL 185 Query: 182 ESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAM 241 E AL TR+ VFF VL+D AL LFPE + M + Sbjct: 186 EKALNTRHANVFFSVLKDANALDKLFPEF-----------------IWEDSQMLTDILNQ 228 Query: 242 LSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLV 301 + R+A LC + + + QL QR+R PN+ + LA Sbjct: 229 VGLTPAQRWAILCKN-------------------TPLTELTQLHQRIRSPNQFKILAEQT 269 Query: 302 AEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGR 361 F + H ++ T S++A +KPQ L A + T + D+ + R Sbjct: 270 RSFLENQHI--PMDSTTWENWLISVNAIKKPQPFILLI----AILSRLTNSKVEDWQKLR 323 Query: 362 WLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 + + ++++ GF G E+ + L + R A+ Sbjct: 324 ------DTIAVINAASLIKQGFSGAELGQALKKVRTEAL 356 >UniRef50_Q1QZ27 Polynucleotide adenylyltransferase region n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ27_CHRSD Length = 384 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 179/402 (44%), Positives = 228/402 (56%), Gaps = 44/402 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 + +Y VGGAVRDA LG PV D DWVVVG+TP+ + G+ VGRDFPVFLHP THEEYAL Sbjct: 16 LDVYRVGGAVRDARLGWPVTDEDWVVVGATPEALTARGFVPVGRDFPVFLHPVTHEEYAL 75 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK G GYTGF +A+P+VTLE+DL RRDLTINA+A+D +G ++DP++G DL R+ Sbjct: 76 ARTERKQGHGYTGFVVHASPEVTLEEDLARRDLTINAMAEDRDGRLVDPFDGRQDLDARV 135 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRVLR ARF ARY LGF IAD+T LMR + GE+ HL ERVW+E Sbjct: 136 LRHVSEAFVEDPLRVLRTARFWARYRELGFVIADDTKRLMRGLCDNGEIAHLVAERVWQE 195 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 T AL +P +FQ L +CGAL V PE+DA + G + L Sbjct: 196 TVKALGEPHPMAYFQALHECGALAVWMPELDAS----------DMLARGEAAMARLPAGG 245 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 S R D + E LC+RLRVPN RDLAR Sbjct: 246 EPSQWRWARLLEALEDEAR----------------------EALCERLRVPNAWRDLARQ 283 Query: 301 VA--EFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYP 358 VA H L ++ FD+IDAWR+ +RV L + Sbjct: 284 VARTRALQRQHGDGGLEGSDVMAWFDAIDAWRRSERVAPL----------QRYLAMETPA 333 Query: 359 QGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 + EAW+ A ++ +A++E G++G + + L +RR A + Sbjct: 334 LAACVDEAWQAASAIQPQALLEEGYRGKALGDALAQRRQARI 375 >UniRef50_UPI0000E0E587 tRNA nucleotidyltransferase n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E587 Length = 378 Score = 331 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 153/408 (37%), Positives = 224/408 (54%), Gaps = 32/408 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ YLVGGAVRD LL +KDRD+VVVG++P++++ GY+ VG+DFPVFLHP+T EEYAL Sbjct: 1 MQTYLVGGAVRDTLLKRRIKDRDYVVVGASPEQLVALGYKPVGKDFPVFLHPETQEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR ERK G GY GF+ VTLE+DL RRDLTINA+A DD G IIDP+NG DL +R+ Sbjct: 61 ARVERKVGLGYGGFSFVTDATVTLEEDLSRRDLTINAMAMDDQGNIIDPFNGQADLAHRI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 +HVSPAF EDPLRVLR+ARF ARY GF IA ET+ LM+++ H+GEL L+ RVW+E Sbjct: 121 FKHVSPAFVEDPLRVLRIARFMARYHQYGFTIAPETVELMKKIGHSGELAALSAPRVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDA-LFGVPAPAKWHPEIDTGIHTLMTLSMA 239 T AL P+++F VL D L F ++ A + + + A H L Sbjct: 181 TALALGEFAPEIYFSVLIDTLCLSPWFDQLSASIRNIESLAL------AFQHAKGLLESG 234 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 + + A L G P + V Q L +P ++D Sbjct: 235 EVTQDE---HLAITTTLLTLGNKPQD---------------VSAWTQLLPLPTFVQDCIL 276 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 L + + L + +++ + D R+PQR+ + + +D+ Sbjct: 277 LTHRHMNTMEQLDTLEAQQLLECLNQCDIHRRPQRLALMIKVLSC------YEQVSDFTL 330 Query: 360 GR-WLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 +L + A+SV + ++ G++G +I+ +L ++A +++ + Sbjct: 331 NYLFLENVVQAAKSVNVQDIIAQGYQGADIKTQLQHAQLAQISTLLNR 378 >UniRef50_C6PT81 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PT81_9CLOT Length = 460 Score = 321 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 103/419 (24%), Positives = 179/419 (42%), Gaps = 42/419 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYA-- 59 + Y+VGG VRD+L+ KD D + P++ L+ + R + T Sbjct: 25 ESYVVGGCVRDSLINREPKDWDL-TTNALPEQTLEIFKTEGFRVIETGIKHGTVTILMNG 83 Query: 60 ---LARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 T R G +L++DL RRD TIN++A +++ +ID +NG+ D Sbjct: 84 NPYEVTTYRVDGEYLDNRHPDNVTFTTSLKEDLSRRDFTINSMAYNEDKGLIDYFNGISD 143 Query: 116 LQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADE-TLALMREMTHAGELEH 171 L+++++R V F ED LR+LR RF++ L F++ E T + +++ + + + Sbjct: 144 LKSKIIRCVGNADERFNEDALRMLRAVRFSS---ELEFKLDFEGTFSAIKK--NCNLIRN 198 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++ ER+ +E L + P L++ L + PEI G H + D H Sbjct: 199 ISVERIREEFCKILISHKPSNGVLALKETNLLEYILPEIVPCTGFNQHNVHHDK-DIFYH 257 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQLCQRL 288 TL L A +++R A L HD+GK + +GH ++ ++ RL Sbjct: 258 TLSVLDNA---PNNINIRLAALLHDIGKPKCFTMDDKNIGHFYGHNKVSAEIARKILVRL 314 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 + N+ D L+ H F + P +I K + + K + +E L AD++G Sbjct: 315 KFDNKTIDTVYLLIYEHM--SKFDKIKPYSIKKFMNRV----KIENLESLFELQIADIKG 368 Query: 349 RTGFESADYPQGRWLREAWEVA-----------QSVPTKAVVEAGFK-GVEIREELTRR 395 E DY + L++ E ++ ++ G K G +I E L Sbjct: 369 LA-EEYRDYSKILSLKDKCETIIKEKQPLNMKDLNINGSDLINLGIKQGKQIGEILEAL 426 >UniRef50_C8PZE9 Multifunctional CCA protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZE9_9GAMM Length = 393 Score = 321 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 157/423 (37%), Positives = 210/423 (49%), Gaps = 47/423 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M++YLVGGAVRD +L V + D+VVVG+TP++ML+ G+ QVG DFPVFLHP+TH+EYAL Sbjct: 1 MQVYLVGGAVRDYVLAREVTEHDYVVVGATPEQMLELGFSQVGADFPVFLHPRTHDEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG--------------EI 106 ARTERKSG+GY GF +A VTLE+DL RRDLTINA+A + NG +I Sbjct: 61 ARTERKSGNGYLGFNVHADAAVTLEEDLARRDLTINAMAIEVNGLFDCGFKQGKFDARDI 120 Query: 107 IDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 IDPY GL D+Q + LRHVS AF EDP+RVLR+ARFA+RYA LGF + + T L +M A Sbjct: 121 IDPYGGLADIQQKKLRHVSIAFAEDPVRVLRLARFASRYAPLGFTVDESTTKLTSQMKAA 180 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 GEL HL ERVW ET ALT P ++F L L V+ P++ + +P+ Sbjct: 181 GELSHLVAERVWSETSKALTQAWPDIYFDTLYQLNVLDVIMPKL------YQASNDNPK- 233 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFA--TLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQL 284 L L MA ++FA C + L P + Sbjct: 234 -QWQLMLSALRMAGEQQADNLIKFALVATCFKSDQQLNNPTTEYL-------------EF 279 Query: 285 CQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEA 344 CQ L+VP L + E D + F L + + +L ++ + +EQ Sbjct: 280 CQGLKVPKNTERLGLFILEHFDKLKNFDHLTAEQLFELLRLTNSLKDTSLLEQALQVVHL 339 Query: 345 DVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWK 404 Q L + K V G I E + + R+ + Sbjct: 340 ---------YQQVKQTALLATIKTQLTQISAKDVASE-LTGKHIGEAIDKLRLQKLEEIL 389 Query: 405 EQR 407 Sbjct: 390 NHP 392 >UniRef50_UPI0000E87B3C tRNA nucleotidyl transferase, putative n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87B3C Length = 378 Score = 320 bits (820), Expect = 7e-86, Method: Composition-based stats. Identities = 152/406 (37%), Positives = 232/406 (57%), Gaps = 30/406 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIYLVGGAVRD+LL +P KD+D++VVG+TP+ M++ G++ +G+DFPVFLHP+++EEYAL Sbjct: 1 MKIYLVGGAVRDSLLNIPFKDKDYLVVGATPEIMVNLGFKPIGKDFPVFLHPKSNEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE+K +G+ GF YA+PDV++E+DLKRRD+TINA+AQD G IDPY+G+ D+ ++ Sbjct: 61 ARTEKKIAAGHKGFNFYASPDVSIEEDLKRRDITINAIAQDSEGNYIDPYDGISDIGKKI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 +RHVSP+F EDPLRVLRVARF A+ F I DET+ LM+ M GE+E L+ ERV E Sbjct: 121 IRHVSPSFQEDPLRVLRVARFKAKLPS--FVIYDETMMLMKRMVADGEVECLSSERVTAE 178 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 L ++ +VL +C AL ++FP+I + + + L L+ A Sbjct: 179 LMKGLDQKDAFSMLEVLDECAALPIIFPDIS-----------FKKHNRAVKKLFDLANEA 227 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +S + L + L P +E + +++ EI + L Sbjct: 228 QVSNSKRLLLFLLAVNFEDNLINPT---------------IEVNTRIIKLTAEINKIIVL 272 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + ++ D + F LN ++ + L D +R+P RV + ++GR + +G Sbjct: 273 LQKYSDKLINFFTLNVESQLDLLGVFDFFRRPHRVIECIDLISLVLQGR-DLSNVLLLEG 331 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 R L ++ A + K V+ G I+ L R R+ ++ K + Sbjct: 332 RSLILEYQ-ADLLHNKITVDKDQSGENIKRALYRERLNTLSKLKNR 376 >UniRef50_B3DZP1 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZP1_METI4 Length = 443 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 106/420 (25%), Positives = 178/420 (42%), Gaps = 24/420 (5%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHE 56 + GG VRD LL D D + +TP ++ + ++ +G+ F V Sbjct: 17 FTAFFAGGCVRDILLKKEPHDID-IATSATPDQVQNLFKEKASGLIGKSFGVIRVKSGAH 75 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 + +A T R G A T ++D RRD TIN + D G IID G D Sbjct: 76 FFEVA-TFRTDIGSQGGRWPKAVQFSTPKEDALRRDFTINGIFYDPLTGTIIDYVGGSED 134 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 ++ + +R + F ED LR+LR RFA R LGF I ++T ++ H + + Sbjct: 135 IEKKRIRAIGDPKIRFEEDHLRLLRAIRFAVR---LGFSIEEKTWEAIQSSAHK--ITQI 189 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 +PER+ +E + T +P ++L G LR + PEI L GV P ++HPE D Sbjct: 190 SPERIREELDKIFTGPDPAKGLELLDQSGLLRFILPEISNLHGVEQPKEFHPEGDVF--N 247 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLR 289 + L ++ + +P +++ A L HD+GK +T +GH G ++ E++ RLR Sbjct: 248 HVLLLLSHLHNPSLELALAALFHDVGKAVTFSRDNTGQIHFYGHETVGAQITEKIMTRLR 307 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 +I H P + T+ KL P +E + + Sbjct: 308 YSKDIIKKVVECVRNHMSFKDVPRMKKSTLKKLILKPTF---PIELELHRIDCLSSHGNL 364 Query: 350 TGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVASWKEQRC 408 + + + + ++ E+ + + ++ G K G ++ E L R A + R Sbjct: 365 SIYNFLNKIKEQYSAESLSPPKLITGFDLLALGLKPGKKVGEILELIREAQLEDKISSRA 424 >UniRef50_A5EXT8 TRNA nucleotidyltransferase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXT8_DICNV Length = 357 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 163/402 (40%), Positives = 211/402 (52%), Gaps = 45/402 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ YLVGGAVRD LLGL DRDWVV+G T M G++QVGRDFPVFLHP+T EEYAL Sbjct: 1 MQRYLVGGAVRDRLLGLDGSDRDWVVIGETMDSMRARGFRQVGRDFPVFLHPETGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR ERK G+ GF ++TLE+DL RRDLTINA+A+D+NG++IDPY G D+Q ++ Sbjct: 61 ARIERKIARGHQGFCFDFHQNITLEEDLIRRDLTINAMAEDENGQLIDPYGGSADIQAKI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLRVLR+ RF AR+AHLGF IA ETL L EM +GEL+ LT ERVW+E Sbjct: 121 LRHVSPAFSEDPLRVLRLMRFWARFAHLGFTIAPETLQLCGEMARSGELQTLTAERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E AL NP+ F L AL VLF G P+ M + Sbjct: 181 CEKALKAPNPECFLMGLAQIHALNVLF-------GATQPSARQL-------AAMNQRLMN 226 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + + R A H L+ L +++ +P + L Sbjct: 227 TPTLEAHQRLARCLW-----------------HEK---DLIAALKKQMPLPQKYHYWLDL 266 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 VA + +L+ + ++ + + + R V LA T D +T +A Sbjct: 267 VARYGELLQNWQHISGEQRWAILKACGGLRAAGDVFALAQTCGVDEALQTQITAAQ---- 322 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 E SV V +AGF G + EL RR+I + Sbjct: 323 -------EKVNSVQANDVQKAGFSGAALGAELKRRQIVLLTD 357 >UniRef50_A0L904 Polynucleotide adenylyltransferase region n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L904_MAGSM Length = 393 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 151/398 (37%), Positives = 208/398 (52%), Gaps = 31/398 (7%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 +Y VGG+VRD LLG +D+DWVVVG+ P+++ GY++VG DFPVFLHP T EEYALAR Sbjct: 19 LYEVGGSVRDRLLGQRPRDQDWVVVGACPEQLQQLGYKKVGADFPVFLHPYTQEEYALAR 78 Query: 63 TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLR 122 ERK G GY GF A P VTLE DL RRDLTINA+A+ +G++IDPY G+ DLQNR LR Sbjct: 79 RERKQGCGYLGFAVEAPPTVTLEQDLARRDLTINAMARTLDGQLIDPYGGVQDLQNRTLR 138 Query: 123 HVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETE 182 HV+ AF EDPLRVLRVAR AR A +GF + T L R++ GEL H+ PERVW+E++ Sbjct: 139 HVTAAFAEDPLRVLRVARLLARLAPMGFAVDPATERLCRQLVAQGELGHVCPERVWRESQ 198 Query: 183 SALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAML 242 L F Q ++ G P + HP LSMA Sbjct: 199 KGLLEPRGDRFAQFVQQIGV--EFIP----------SQRLHPAACAF----SRLSMACAQ 242 Query: 243 SPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVA 302 V VR DL G G + L +RL +P ++ A + Sbjct: 243 PGDVTVRLVAWLWDLLAQA----------GEEAQGDVWLHALAKRLALPKGLQREAAWLL 292 Query: 303 EFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRW 362 + + + + L + + + R Q + + +T F AD G Sbjct: 293 SHLSVGMASVTADVEGLYALLEGLHGGLRQPRTAQFLQLCQIE---QTLFHGADRLLG-- 347 Query: 363 LREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 +++A ++ QSV +A++ G+KG E+ + L R+ + Sbjct: 348 IKKAMKIWQSVKPQAIMADGYKGAELGQRLKFERLQQL 385 >UniRef50_B1KWG6 PolyA polymerase family protein n=16 Tax=Clostridium RepID=B1KWG6_CLOBM Length = 450 Score = 310 bits (794), Expect = 6e-83, Method: Composition-based stats. Identities = 100/420 (23%), Positives = 176/420 (41%), Gaps = 45/420 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT------- 54 + Y+VGGAVRD+LL V D D + + PQE+++ + P L T Sbjct: 27 EAYIVGGAVRDSLLERKVNDWD-ITTSANPQEVMNIFENLGYKIIPTGLKHGTVTILINS 85 Query: 55 -HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGL 113 E R + + L++DLKRRDLTINA+A +D ++D ++GL Sbjct: 86 IGYEVTTFRIDGEYEDNRRPKEVKFT--SNLKEDLKRRDLTINAMAYNDKTRLVDYFHGL 143 Query: 114 GDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 DL N+++R V + F ED LR+LR RFA++ L F + + T +RE++ + Sbjct: 144 EDLNNKIIRCVGDSKDRFNEDSLRMLRCIRFASQ---LNFHMEESTKLNIRELSR--NIA 198 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGI 230 +++ ER+ E L + P + + + + + PE+ A G H + D Sbjct: 199 NVSMERIRDELCKILVSSQPVYGIRNIVELNLVDYIIPELKACVGFEQHNIHHDK-DVYG 257 Query: 231 HTLMTLSMAAMLSPQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQLCQR 287 H L + + ++++R + L HD+GK +GH + + + +R Sbjct: 258 HILSVV---ENVPNKLELRLSALLHDIGKPKCFSIGDNGQGHFYGHQKISADMTKDILKR 314 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 L+ N+I + H + L +I K + + ++ L AD++ Sbjct: 315 LKFDNKIIYKVDKLVYNHMT--RYNKLRTPSIKKFINKVGI----DNLDDLFELQIADIK 368 Query: 348 GRTGFESADYPQGRWLREAWEVAQS-----------VPTKAVVEAGF-KGVEIREELTRR 395 G E + L+ E S + +++ G +G EI L + Sbjct: 369 GSAK-EYHSFNNVLNLKIKCEKILSEKQPLTIKDLDINGYDLMKLGINQGKEIGIMLNKL 427 >UniRef50_Q0F3A3 TRNA nucleotidyltransferase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3A3_9PROT Length = 468 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 145/427 (33%), Positives = 198/427 (46%), Gaps = 41/427 (9%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA-----GYQQVGRDFPV--FLHPQTH 55 +LVGG VRD +L + KD D V G T + DA + VG+ F V Q Sbjct: 36 AWLVGGCVRDLMLHINPKDYDLEVYGLTEAALSDALQQLGRCEMVGKQFGVHKLWFRQME 95 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLG 114 + AL RTE KSGSG+ GF + P +T E RRD TINA+ D ++D + G Sbjct: 96 IDVALPRTESKSGSGHRGFVVHTDPHLTPEIATLRRDFTINAMMYDPLQHRLLDLHGGQS 155 Query: 115 DLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 DL +LRHVSPAF EDPLR LR +FAAR+ F +A ET A+ R + + L Sbjct: 156 DLDEGILRHVSPAFAEDPLRPLRAMQFAARFR---FHLAPETAAMCRTLVAEA--DTLPA 210 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 R+W E + R+P L D G L PE+ AL P +WHPE D +HTL Sbjct: 211 SRIWIEWQKWSHARSPSCGLIALHDSGWLACY-PELQALQQCPQDPRWHPEGDVWVHTLQ 269 Query: 235 TLSMAAML--------SPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQ 283 + AA + + + FA LCHDLGK T P+ GH AGV L + Sbjct: 270 VVDQAAEMAKKHHLSRPDREHLLFAALCHDLGKPETTVQQPDGRIGSPGHSKAGVPLTRR 329 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWR-KPQRVEQLALTS 342 L QR+ P I + + + H + H F + + +L AWR +P +E + Sbjct: 330 LLQRMHAPGAIGKIVVPLVQEH-ITHLFGDPTARAVRRL-----AWRLQPAHIELWEMLV 383 Query: 343 EADVRGRTGFESADYPQGRWLREA-------WEVAQSVPTKAVVEAGFK-GVEIREELTR 394 EAD GR P WL+ A A+ V +++ G + G + E L + Sbjct: 384 EADASGRA-PAPPSRPALPWLQLAQSMQQHRQAAARIVDGDMLMQLGIEPGPVLGEMLAK 442 Query: 395 RRIAAVA 401 A + Sbjct: 443 AYQAQLN 449 >UniRef50_B9XMC7 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=2 Tax=Verrucomicrobiales RepID=B9XMC7_9BACT Length = 440 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 107/411 (26%), Positives = 167/411 (40%), Gaps = 30/411 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 Y VGG VRD LG KD D V + P+++ + + GR F V + + E+ Sbjct: 19 FDAYWVGGCVRDYFLGREPKDFD-VATNAVPEQVERIFQRTIPVGRKFGVLIVLEKGFEF 77 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQ 117 +A T R G + D RRD TIN L D N + D G DL+ Sbjct: 78 QIA-TFRAESDYQDGRHPEQVTFGDPKADASRRDFTINGLFYDPVNDVLHDWVGGEVDLK 136 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++LR + F ED LR+LR RFAA+ L F+I +T A M + +A +++ ++ Sbjct: 137 AKVLRTIGEPAERFAEDHLRLLRAVRFAAQ---LNFQIEAKTFAAM--VANAPKIKTISA 191 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ +E + +LR+ G L + PEI A +HPE H + Sbjct: 192 ERIREELMKVFRPPHAARGLDLLRESGLLEQVLPEIAATITCEQTPDYHPEGSVYNHVRL 251 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLT----PPELWPRHHGHGPAGVKLVEQLCQRLRV 290 LS ++ +A L HD+ K +T P +GH G ++ E L QRL+ Sbjct: 252 MLSQLPE-DASPELPWAVLLHDVAKPVTASRDPETGSIHFYGHEKVGAEMAEVLLQRLKF 310 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG-R 349 P + D +H P + T+ ++ + D G Sbjct: 311 PRKETDEIVAAVLYHMQFKDVPNMRKSTLRRMIMR-------ETFPLELALHRLDCLGSH 363 Query: 350 TGFESADY--PQGRWLREAWE-VAQSVPTKAVVEAGFK-GVEIREELTRRR 396 + D+ Q R L + E + + ++ G + G + E LT R Sbjct: 364 RMLDHYDFMVEQERELEKKPEILPPLLNGNDLMALGMQPGPAMGELLTELR 414 >UniRef50_C1F9R3 tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9R3_ACIC5 Length = 462 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 126/423 (29%), Positives = 187/423 (44%), Gaps = 35/423 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLHPQTHEEYA 59 + Y GG VRD LLG P KD D V + P +L + VG F V L + Sbjct: 33 EAYFAGGCVRDMLLGHPPKDYD-VTTRARPDVVLALFPRTYAVGAHFGVVLVADEIDGQP 91 Query: 60 LAR---TERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDD---------NGEI 106 + T R G+ G A EDD+ RRD TIN + D + + Sbjct: 92 ITTEVATFRSDGAYLDGRRPSEVAFADRPEDDVLRRDFTINGMLLDPEKWQQTGSLDDAV 151 Query: 107 IDPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREM 163 +D +G DL ++R + A F ED LR+LR RFAAR+ G+ + ET A +R++ Sbjct: 152 LDFVDGRADLSAGIVRAIGHAERRFTEDKLRMLRAVRFAARF---GYELEPETFAALRQL 208 Query: 164 THAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH 223 A + ++ ERV E LT + + F++L G LR + PEID L GV P ++H Sbjct: 209 --APGIAQVSRERVRDELTRMLTEGHARHAFELLDASGLLREVLPEIDRLHGVEQPPQYH 266 Query: 224 PEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPEL--WPRHHGHGPAGVKLV 281 PE D +HTL+ L A P + + L HD+GK T R GH GVK+ Sbjct: 267 PEGDVWVHTLLLLEKLAPGCP-ATLAWGALLHDVGKPATFERAPDRIRFSGHVEVGVKIA 325 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFD--SIDAWRKPQRVEQLA 339 ++C+RLR N+ + + E H + P T+ + F D + R++ Sbjct: 326 AEICRRLRFSNDETEQILALVENHMRFGDIQRMKPSTLKRFFRLPGFDEHLELHRID--- 382 Query: 340 LTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIA 398 + T +E A EA V + ++EAG++ G + R+ L A Sbjct: 383 --CLSSHGDLTLYEFAQQQYHALPPEAVRPPLLVTGRDLIEAGYQPGPQFRQWLALAEDA 440 Query: 399 AVA 401 + Sbjct: 441 QLE 443 >UniRef50_C5ZY12 tRNA nucleotidyl transferase n=3 Tax=Helicobacter RepID=C5ZY12_9HELI Length = 417 Score = 304 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 137/407 (33%), Positives = 216/407 (53%), Gaps = 21/407 (5%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 KIYLVGGA+RD LLGLP KD+D+V VG + + YQ+VG++FPVFL +H + ALA Sbjct: 9 KIYLVGGAIRDYLLGLPTKDKDYVAVGFSENDFQR--YQKVGKNFPVFLID-SHTQIALA 65 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN-GEIIDPYNGLGDLQNRL 120 R E K+ GY GF+ Y +VTL +DLKRRDL+INA+A D N +IDP+NG DLQN++ Sbjct: 66 RKETKTTKGYNGFS-YKTDNVTLLEDLKRRDLSINAMALDLNSNTLIDPFNGKKDLQNKI 124 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH SPAF EDPLR+LR+ARF A+ + ++I T L+ M EL+ L P RV++E Sbjct: 125 LRHTSPAFCEDPLRILRLARFKAKLG-IHWKIHPSTKVLVHSMKE--ELKTLEPNRVFEE 181 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 + L+ +N +FF+ L + G L+ +FP I AL + H E +HT+ L Sbjct: 182 IKQVLSQKNSHLFFETLFELGVLKEIFPSIYALTILKEYNPNHLESSVFVHTMEVLKR-- 239 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPE-LWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 + + + ++ L H++ K T P + + L++ +++P I+ Sbjct: 240 LDNDSLLLKLTALYHNIAKPYTYRNSKNPNEYDNPKKVESLID-----MQIPKTIQKKML 294 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 ++ H I ++P I+ F S + EAD + + Sbjct: 295 ILIGNHIKITHLFAMHPSKILDFFHSFKG--DKTLLLDQIRFFEADYKRCISQAQYTTLE 352 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFK---GVEIREELTRRRIAAVASW 403 + + E + S K +++ G +I++ + + +I ++S+ Sbjct: 353 SKKIIELFSQINSYSPKEWIQSQKSKPNGNQIKDHIQKAKINLISSF 399 >UniRef50_A8MJB7 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJB7_ALKOO Length = 450 Score = 303 bits (777), Expect = 6e-81, Method: Composition-based stats. Identities = 103/413 (24%), Positives = 171/413 (41%), Gaps = 38/413 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQV--GRDFPVFLHPQTHEEYA 59 Y+VGG VRD++L +D D + TP++M++ G++ + G H Y Sbjct: 30 YIVGGCVRDSILNKSPQDWD-ICTNCTPEKMMELLSGFKVIPTGLKHGTVTVVIDHVGYE 88 Query: 60 LARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + T R G G +L +DLKRRD TINA+A +ID + G+ DL N Sbjct: 89 V-TTYRVDGDYRDGRHPEKVQFTASLREDLKRRDFTINAMAYHHKDGLIDYHGGMEDLWN 147 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 R ++ V F ED LR+LR RF+A+ L + + + T +R ++H + ++ E Sbjct: 148 RKIKTVGNPLERFSEDYLRMLRAVRFSAQ---LDYTLEERTFQGIRALSH--NIGKISTE 202 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ +E L T P +L D L+ + PE++ G + H + D H L Sbjct: 203 RIREELNKILMTEVPSRGLVLLHDTDLLKYILPELEVCVGFNQHSPHHDK-DVFNHILSV 261 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 + + +R A L HD+GK T + H A K +++ +RL+ N Sbjct: 262 VDQT---EKDLILRLAALLHDIGKPETFSLDESGIGHFYRHHVASWKTAQKIMRRLKYDN 318 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 D + + H + L+ K I +L ++ P + +L AD+ G + Sbjct: 319 RTIDQVLALVKEHMT--RYEKLSDKAIKRLISRVN----PSNMHRLFKLQIADIGGSSKR 372 Query: 353 ESADYPQG--RWLREAWEVAQ-------SVPTKAVVEAGF-KGVEIREELTRR 395 R Q + ++E G +G +I L Sbjct: 373 NDISDVLDLKRRAERILHEKQPLSIKDLEISGHHLMELGVPEGKKIGRILNEL 425 >UniRef50_B2UM12 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=2 Tax=Bacteria RepID=B2UM12_AKKM8 Length = 464 Score = 303 bits (776), Expect = 9e-81, Method: Composition-based stats. Identities = 108/413 (26%), Positives = 175/413 (42%), Gaps = 33/413 (7%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEYAL 60 +Y VGG VRD LLG VKD D + + P E+L +VG F V L + + + Sbjct: 28 VYFVGGCVRDRLLGYSVKDID-IATSARPDEVLRLFPDAWEVGAAFGVVLVRREGFSFEV 86 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDPYNGLGDL 116 A T R+ GS G E+D +RRD T+N L +D G ++D G+ D+ Sbjct: 87 A-TFRRDGSYRDGRRPEDVCFTDAEEDARRRDFTMNGLFEDPFSSPPGRVVDYVGGVEDI 145 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + R+LR + F ED LR++R RFA ++ ET + + +A L ++ Sbjct: 146 RARVLRCIGEPDRRFEEDSLRLMRAVRFAVTREV---QVEKETCSSI--FRNAPLLARIS 200 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 PER+ +E + L + + ++L + G ++ + PEI + G P +WHPE D HTL Sbjct: 201 PERIREELDRILLSPGRKRGVEMLVETGLMKHVIPEIYDMIGCTQPPQWHPEGDVYTHTL 260 Query: 234 MTLSMAAMLSPQVDVRFA--TLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRL 288 M L V ++ A L HD+GK R GH G + + +RL Sbjct: 261 MMLDALGRDGSPVSLKLALGVLLHDIGKPPCRQVDETGRIRFSGHDKEGSSMARVILRRL 320 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 + N + D + E H + T+ ++F + +R + +L D Sbjct: 321 KYSNAVVDAVCSMVERHMRFINVRQMRKSTL-RMFMNAPHFRDELELHRL------DCLS 373 Query: 349 RTGFESADYPQGRWLREAWEVAQ----SVPTKAVVEAGFK-GVEIREELTRRR 396 G ++ V + +V G G + + L+R + Sbjct: 374 SNGLMDNWQFVRDFMDSYRNAPLVPPPLVTGRDLVNLGLSPGPDFGKWLSRLQ 426 >UniRef50_C7N377 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N377_SLAHD Length = 454 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 144/435 (33%), Positives = 207/435 (47%), Gaps = 42/435 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV-----GRDFPVFLHPQTHE 56 + + VGG VRD LLG KD D V G E+ + G F +F Sbjct: 22 RTFYVGGMVRDRLLGRENKDIDIEVHGIPADELGRILSELGEVTAMGASFGIFGLKHYDV 81 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 + A+ R E +G G+ F + P + E RRD T+NAL +D GE++D + G D Sbjct: 82 DIAMPRKENATGRGHKDFEVFTDPFLGPEKAAMRRDFTMNALMEDVLTGEVLDFFGGQED 141 Query: 116 LQNRLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++ ++RHV+ F EDPLRVLR A+FAAR+ GFR+ADET+AL M +L L+ Sbjct: 142 MRRGVIRHVNDRTFAEDPLRVLRAAQFAARF---GFRVADETVALSSRM----DLSALSS 194 Query: 175 ERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E + L P +FF +R L V FPE+ AL GV +HPE D HT+ Sbjct: 195 ERIVGEMDKAMLKAAKPSIFFNEMRAMDQLDVWFPELKALIGVEQEPAFHPEGDVWNHTM 254 Query: 234 MTLSMAAMLSPQVD----VRFATLCHDLGKGLTPP--ELWPRHHGHGPAGVKLVEQLCQR 287 + +AA L Q +A+L HDLGK +T + R GH GV + + R Sbjct: 255 RVVDLAAGLRGQASNPRYFMYASLVHDLGKIVTTQVIDGRIRAFGHEYEGVPIAKTFLGR 314 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNP--KTIVKLFDSIDAWRKPQRVEQLALTSEAD 345 L + + A + H + + K +KLFD + E L L SEAD Sbjct: 315 LTNESGLIRYATNMMTLHMRPNMLAAQHAGRKPYMKLFD------ESVSPEDLLLLSEAD 368 Query: 346 VRGRTGFESADYPQGRWLREAWEVAQS------VPTKAVVEAGFK-GVEIREEL---TRR 395 GR +S+ Y G L+E + V + +++AGF+ G + E L + Sbjct: 369 FCGR-DVDSSTYTYGAILQENLAFYRDAMAKPFVQGRDLIDAGFEPGPDFGEALELGHKL 427 Query: 396 RIAAVASWKEQRCPK 410 RI+ V+ KE P+ Sbjct: 428 RISLVS--KEHALPQ 440 >UniRef50_C8N8W3 Multifunctional CCA protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8W3_9GAMM Length = 358 Score = 301 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 167/397 (42%), Positives = 224/397 (56%), Gaps = 44/397 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+I+LVGGAVRDALLGLPV DRDWVVVG+T +EML G++QVG+DFPVFLHPQ+ EEYAL Sbjct: 1 MEIFLVGGAVRDALLGLPVHDRDWVVVGATAEEMLAQGFRQVGKDFPVFLHPQSGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR ERK+G G+ F AP+V+LE DL RRDLTINA+AQ +G ++DPY G D+Q R+ Sbjct: 61 ARQERKTGRGHQAFAFDFAPEVSLEADLLRRDLTINAMAQAADGRLVDPYGGQADVQARV 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLRVLR+ RF AR+A LGF IA ETLAL R M AGEL+HL+ ER+W E Sbjct: 121 LRHVSPAFAEDPLRVLRLMRFYARFAPLGFSIAAETLALCRAMVAAGELQHLSAERIWAE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E AL + PQ FF L+ GAL VL G A ++ + ++ + +A Sbjct: 181 CEKALASPAPQAFFSGLQAVGALNVL--------GFDASDAQLSAMNARLQAVLAIESSA 232 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 R A G A + L + L +P R +L Sbjct: 233 EH------RLAIWLQ----------------GEDCAAARTA--LQKALPLPKRYRYWLQL 268 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 A++ + I + L+ +T L + + R V LA + DV Sbjct: 269 AADYGNAIRRWHELDGETRWMLLKASGSLRAEGDVLTLAQLMQLDVA-----------LY 317 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRI 397 ++ A E +++ + + A ++G E+ E + R +I Sbjct: 318 AEIKNARERVRALSLEEL-TAQYRGAELGEAIRRVQI 353 >UniRef50_D1RE93 Multifunctional CCA protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RE93_LEGLO Length = 382 Score = 300 bits (769), Expect = 6e-80, Method: Composition-based stats. Identities = 161/411 (39%), Positives = 217/411 (52%), Gaps = 56/411 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG-----RDFPVFLHPQTH 55 MKIYLVGGAVRD LLG KD DW+VVG T EML GY+ V +FPVFLHP+T Sbjct: 1 MKIYLVGGAVRDKLLGFAPKDNDWLVVGGTRDEMLKLGYKPVPNNHGTSEFPVFLHPETK 60 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ----DDNGEIIDPYN 111 EEYALAR E ++G G+ GF + +T+ DDLKRRDLTINA+A + GE+IDPYN Sbjct: 61 EEYALARLEERTGYGHGGFEFDTSSSITIVDDLKRRDLTINAMAFPVEDEKMGELIDPYN 120 Query: 112 GLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 G DL+NR+LRH+SPAF +DPLR++R ARFAA LGF +A ET+ LM +M G++ Sbjct: 121 GKVDLENRILRHISPAFIDDPLRLIRTARFAA---CLGFEVAAETMELMTQMVIEGKVSE 177 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 L ER+W E E A+ +P+ FF VL+ C A R+LFP I P P Sbjct: 178 LRNERIWMEMERAIKGPHPEKFFDVLKKCSADRILFPYIK----TPGPG----------- 222 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 + + AA VRFA L DL + + V + C++ + Sbjct: 223 -INAMQRAADHKNSAPVRFAALMLDLTQ-------------------EEVTKFCKQFNLS 262 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 N+ RDLA L + L+ I+ L ++ A++ +R + V GR Sbjct: 263 NQYRDLALLAIKNLPQFQRLSELDAPEILILLTNMGAFQNKERFNECL-----HVFGRYT 317 Query: 352 FESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 E +R A+ A S+ TK + + + G EI + RI A+ Sbjct: 318 QEPG---YVEKIRNAFHAATSINTKEL-ASKYIGHEITRRIKILRIEAIQQ 364 >UniRef50_Q466Z1 tRNA nucleotidyltransferase n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q466Z1_METBF Length = 404 Score = 300 bits (768), Expect = 8e-80, Method: Composition-based stats. Identities = 128/401 (31%), Positives = 193/401 (48%), Gaps = 21/401 (5%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEYAL 60 +Y+VGGAVR L+ D D+ V G T D +Q G FPVF+ E+A+ Sbjct: 22 LYIVGGAVRRFLMCQTPHDVDFCVCGLTVDTFKDLFPDARQQGNQFPVFVVDDC--EFAM 79 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNR 119 ARTE+K +GY GF + P VT+E+DL RRDLTIN++A D G I+DP+NG DL N Sbjct: 80 ARTEKKVCAGYNGFEINSDPSVTIEEDLCRRDLTINSIAIDVITGMIVDPFNGAEDLING 139 Query: 120 LLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 ++ S AF EDP+RV+R ARF Y FR + + M ++ H E++ ++ + + Sbjct: 140 IITPTSDAFKEDPVRVIRAARFMCEYPT--FRASPTLIMYMLDLVH--EIKLISDDHKFS 195 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMA 239 E + ++ P +F +L AL + FPEI +L G+P H + D HT+ L Sbjct: 196 ELKKVFSSPKPSRYFNILNLGHALYITFPEIYSLIGIPQ--AHHSDGDAFEHTMRVLDDC 253 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 L+ FA L HDLGK TP E+ P HH H V++++++ VPNE + A+ Sbjct: 254 RELTDDPVCLFAALTHDLGKATTPTEILPAHHDHETRSVEIIDKIDW---VPNEWKYFAK 310 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 + A H H F + V L + I + +E AD Sbjct: 311 VFAADHMRGHRFREMRRGKRVSLLERIHKSNR--GLEGFCKVLYAD-----KPTPGTMRD 363 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 + + S+ + KG + L ++R+ + Sbjct: 364 IALMHATYAKIYSISGDDLPATTPKGEAFGKVLHQKRVEMI 404 >UniRef50_UPI0001BC63FF Poly(A) polymerase n=3 Tax=Fusobacterium RepID=UPI0001BC63FF Length = 446 Score = 299 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 101/406 (24%), Positives = 174/406 (42%), Gaps = 36/406 (8%) Query: 4 YLVGGAVRDALLGLPVKDRDWVV---VGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 YLVGG+VRD LLG V D D+ + Q + G+ F V EE+ + Sbjct: 26 YLVGGSVRDILLGREVHDFDFCTNLSYETLKQIFSKYFCIETGKAFGVLRLRIDGEEFEI 85 Query: 61 ARTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 A +S G G V +E+DL RRD +INA+A + ++D Y+ DL+N+ Sbjct: 86 AS--FRSEKGSDGRRPEEVIFVKRIEEDLARRDFSINAMAYNQEKGLLDYYDAQKDLENK 143 Query: 120 LLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 ++R + ED LR++R RF ++ LGF + T + M G L + R Sbjct: 144 VIRFIGNPRERIQEDGLRIMRAFRFMSQ---LGFSLESNTKKAI--MEEKGMLGKIAKSR 198 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + +E + + ++ G L ++ P + +L+ +H D HT+ + Sbjct: 199 ITEEWNKLILGDFVVETLEEMKKTGVLELILPSLKSLYHFNQNNPYH-SYDLWEHTMQVV 257 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTP----PELWPRHHGHGPAGVKLVEQLCQ-RLRVP 291 + +D+R A + HD+GK LT + +GH G + + + Q L Sbjct: 258 K---SVPKDLDLRLAAIFHDIGKPLTKTIDEKTGYYHFYGHEKKGAERIRSILQEELEES 314 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 N+ R + E H ++H + K I KL +R E+L S AD G+ Sbjct: 315 NKTRKEVEFLIENHMILHR--NSSEKGIKKLISHFGI----ERTEKLIKLSIADNLGKNL 368 Query: 352 FESADYPQGRWLREAWEVAQ-------SVPTKAVVEAGFKGVEIRE 390 + + + E + ++ A+++ G++G EI++ Sbjct: 369 QQLRENNVADLFYKIVEKQKIPTLQELAIDGFALMKLGYQGKEIQK 414 >UniRef50_A5Z8C9 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8C9_9FIRM Length = 457 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 99/417 (23%), Positives = 179/417 (42%), Gaps = 40/417 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHEE 57 + + VGG VRD +L +D D + + P+++ + + + + E Sbjct: 31 EAFAVGGCVRDTILDREPQDWD-ITTSALPEQVKELFNRTLDTGIQHGTVTVMIKHVGYE 89 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 R + + + L +DLKRRD TINA+A ++ ++D ++G+ D+ Sbjct: 90 VTTYRIDGEYNDSRHPESVEFT--SNLIEDLKRRDFTINAMAYNEREGLVDAFDGINDIN 147 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 N+++R V FGED LR+LR RF+A+ LGF I ++T+ ++++ A LE+++ Sbjct: 148 NKIIRCVGEPEERFGEDALRILRAVRFSAQ---LGFDIDEKTMEAIKKL--APTLENISA 202 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E E + ++NP + G +V+ PE DA+ +H + G HT+ Sbjct: 203 ERIKTELEKLIISKNPCKLITA-YNAGITKVILPEFDAMMECEQNTPYHM-YNVGEHTIK 260 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGL---TPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 + +S +R+ L HD+ K L T GH G +L Q+ +RL++ Sbjct: 261 VM---ENVSADKLMRWTALFHDVAKPLVKTTDANGRNHFKGHALEGSRLAPQIMRRLKMD 317 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 N+ A + E HD NP+ I + I AD G++ Sbjct: 318 NKTIKTASRLIECHDDRPASKGFNPEAIRRSVHKIG----KDIYHNYLELVYADFMGKSK 373 Query: 352 FESAD-YPQGRWLREAWE-----------VAQSVPTKAVVEAGFK-GVEIREELTRR 395 + + Y ++ + +E ++ K ++ G G +I L Sbjct: 374 YGKDEGYDAYVYVCKQYEYIMENNICTSTKELAITGKDLIALGCPLGEKIGRALDEL 430 >UniRef50_C9LM50 PolyA polymerase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LM50_9FIRM Length = 500 Score = 297 bits (762), Expect = 4e-79, Method: Composition-based stats. Identities = 103/413 (24%), Positives = 163/413 (39%), Gaps = 49/413 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA----GYQQV---GRDFPVFLHPQT 54 + Y VGG VRD LL D D + + P+E++ G++ V GR F + Sbjct: 45 EAYAVGGCVRDLLLAKAPHDWD-ITTSAKPEEIISVMGRNGWKTVDGAGRRFGTVIVVIN 103 Query: 55 HE--EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 H E R E + + TL++DL RRD T+NALA +G + D ++G Sbjct: 104 HIAYEVTTFRNEFYGQDSHRPENITFS--STLKEDLSRRDFTVNALALGRDGVVYDYFDG 161 Query: 113 LGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 DL+N+ LR V F ED LR+ R RF L F + M + Sbjct: 162 TKDLENKKLRTVGKAEERFREDALRLFRACRF---IGQLDFMADKSLVRGMASAF--DRV 216 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRV--------------LFPEIDALFG 215 L+ ERV +E E L + +L G + PE+ L Sbjct: 217 SGLSLERVREEVEKLLVSPFAARGLDLLVRTGLNECSCRIRENGRTEAVRILPELSHLVD 276 Query: 216 VPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT----PPELWPRHH 271 +P K+H D HTL ++ A P + +R+A L HD+GKG+ + + Sbjct: 277 LPQQKKFHK-FDGWYHTLAVVNAA---PPTLLLRWAALLHDVGKGMPGVRRIKDGKYTDY 332 Query: 272 GHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRK 331 GH G ++ ++ +R R P + E H H F + + K + ++ Sbjct: 333 GHDLKGAEMAAEIFRRWRFPAAFAKRVVWLVENHMRYHYFANVPEANVEKWLRQLARGKQ 392 Query: 332 -------PQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKA 377 + + +L AD+ G E+A + + E+ Q +P Sbjct: 393 FSSSADMKEGIGELTALCNADIIGCGKDENATEGHSSFGKYMEELCQMMPVST 445 >UniRef50_UPI000196A9FA hypothetical protein CATMIT_01143 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196A9FA Length = 460 Score = 296 bits (759), Expect = 8e-79, Method: Composition-based stats. Identities = 119/402 (29%), Positives = 180/402 (44%), Gaps = 30/402 (7%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVG---STPQEMLDAG--YQQVGRDFPVF-LHPQTHE 56 +YLVGG VRD LL KD D V + +E+L Q +G F V L Sbjct: 25 VYLVGGCVRDFLLKRKSKDIDVEVHHLSFAALKEVLSPFGTVQVMGAAFAVVHLSTLEGY 84 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 E+AL R E K+G + F PD+ LE RRD TIN++ D + G +ID Y+G D Sbjct: 85 EFALPRIEEKTGLKHQDFNVIVDPDLPLEKACARRDFTINSMLYDIETGTVIDFYSGQKD 144 Query: 116 LQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 L+N +LR F EDPLRVLR A F +RY GF++ +T L + + G L+ L+ Sbjct: 145 LKNGILRATNGNHFSEDPLRVLRGASFMSRY---GFKMDPDTKNLCQSIVEEGGLDTLST 201 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER++ E L P LRD L ++D +HPE HT++ Sbjct: 202 ERIYTEYCKILMGLYPSQGLNFLRDIHGLPFYLQDLDT---THQRTDYHPEGSVWNHTML 258 Query: 235 TLSMAAML----SPQVDVRFATLCHDLGKGL-TPPELWPRHHGHGPAGVKLVEQLCQRLR 289 +AA+ S + ++ L HD+GK L T PE +GH G L ++ + Sbjct: 259 VTDLAALCKHHTSEPLWFMWSALLHDIGKPLVTTPEG--HAYGHAEEGAALFDEKVDLIL 316 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 + R + ++ ++H ++ TF N +K + A + ++ L + D GR Sbjct: 317 SHKQKRYIYTMI-QYHMVLPTFSR-NHARKIKFLRFLKAIDQKAPLKDLLYLARCDKLGR 374 Query: 350 TGFESAD-YPQGRWLREAWEVAQS------VPTKAVVEAGFK 384 SA ++ E + V K ++ GF+ Sbjct: 375 GMVTSASINELNAYVEEMISMCGDHAPVPIVTGKDLINEGFE 416 >UniRef50_Q3EZB5 TRNA nucleotidyltransferase n=2 Tax=Bacillus thuringiensis RepID=Q3EZB5_BACTI Length = 510 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 137/376 (36%), Positives = 187/376 (49%), Gaps = 34/376 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQ--EMLDAGYQQVGRDFPVFLHPQTHE--E 57 K+YLVGGAVRD LL + KD+D+ V G + + E L G+DFPV+ E E Sbjct: 19 KVYLVGGAVRDLLLDIVPKDKDYCVTGISQEGFESLFPTAMLQGKDFPVYRMDIDGELCE 78 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 ALAR ERK G+ GF YA+PD+T+EDDL RRD+TIN++A D + ++IDP+ G DL Sbjct: 79 VALARKERKVSEGHNGFVIYASPDITIEDDLARRDITINSMAIDLETNKLIDPFYGELDL 138 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 + +R + AF EDPLRV R ARFAA Y GF I +T +M ++ EL L ER Sbjct: 139 RTETIRATTEAFCEDPLRVYRAARFAAEY---GFFIEYKTSTMMNQLK--SELLSLPIER 193 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 V +ET+ A R P FF L+ L V FPEID L + +HPE + HT+ + Sbjct: 194 VLEETKKAFMARTPSRFFHALKSANVLDVHFPEIDCLSELEQNLMYHPEGNVFEHTMQVI 253 Query: 237 SMAAMLSPQVD------VRFATLCHDLGKGLT----PPELWPRHHGHGPAGVKLVEQLCQ 286 A L+ ++ V F+ L HD+GK +T P + P + H GV + EQ Sbjct: 254 DSARYLADELPVNSELVVMFSALLHDVGKYVTKGIHPVKGTPTYIAHEAEGVPIAEQFLD 313 Query: 287 RLRVPNEIRDLARLVAEFHDLIHT-FPMLNPKTIVKLFD------SIDAWRKPQRV---- 335 R + + H + H F + V + D RKP + Sbjct: 314 RFNL-KSYKKAILFNVANHMVFHDAFTAMKNGKAVDFMEGKFEYSGSDYIRKPGLLPSVG 372 Query: 336 --EQLALTSEADVRGR 349 + AD GR Sbjct: 373 WAQDYITVCIADTVGR 388 >UniRef50_A6Q8W0 Polynucleotide adenylyltransferase/metal-dependent phosphohydrolase n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8W0_SULNB Length = 485 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 135/433 (31%), Positives = 200/433 (46%), Gaps = 64/433 (14%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGST----PQEMLDAG--YQQVGRDFPVFLHPQTHEEY 58 LVGGAVRD ++G VKD D V G T + +L QVG+ F + EY Sbjct: 27 LVGGAVRDMVMGQDVKDYDIEVYGLTTLDELESVLSKFGSVSQVGKHFGIVKLRIGDVEY 86 Query: 59 --ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 + RTERK+G G+TGF + ++ RRD TINA+ + EI+DP+ GL D Sbjct: 87 DFSFPRTERKTGRGHTGFEVEIDGMLDFKEAAHRRDFTINAIGYNIKTYEILDPFGGLND 146 Query: 116 LQNRLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++ ++LRH+ + F EDPLRV R +FAAR+ GF +A+ T L ++M +G LE L Sbjct: 147 IRYKILRHIDDSTFIEDPLRVYRAIQFAARF---GFDVAENTAVLCKQMVASGVLEELPK 203 Query: 175 ERVWKETESAL-TTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+++E + L P + F ++R+ G F E+ AL VP K+HPE D HT+ Sbjct: 204 ERIYEEWKKLLLKAPKPSMGFGLMREWGITEHCFLELHALIDVPQDTKYHPEGDVWTHTM 263 Query: 234 MTLSMAA---------------MLSPQ------------VDVRFATLCHDLGKGLTP--P 264 +++ A +LSP + + FA LCHD GK +T Sbjct: 264 LSIDAMASILNKEEKVESRSCRVLSPDSTTDKHRNEKRALKLLFAELCHDFGKPMTTTVE 323 Query: 265 ELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFD 324 E + GH AG++ RL ++ + + E H L P K Sbjct: 324 EGCIKAIGHEKAGIEPTRSFMYRLTEEHDFIESILPLVEHH--------LKPSQFYKQGA 375 Query: 325 SIDAWRK---PQRVEQLALTSEADVRGRTGFESAD--YPQGRWLREAWEVAQS------- 372 A R+ +E L L ++AD GRT E+ Y G WL E + Sbjct: 376 KASAIRRLATKVNIEDLVLVAKADFLGRTTPEAKKGVYEAGEWLLGKAEELKVKNRPIEP 435 Query: 373 -VPTKAVVEAGFK 384 + + ++ G + Sbjct: 436 ILQGRDLIALGMQ 448 >UniRef50_Q1IUE8 Metal dependent phosphohydrolase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUE8_ACIBL Length = 454 Score = 294 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 113/421 (26%), Positives = 180/421 (42%), Gaps = 40/421 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFL--------- 50 + YLVGG VRD LLG D D V + P +++ + VG F V L Sbjct: 20 QAYLVGGCVRDLLLGRDPADYD-VATDAIPDQVMKIFPKTWAVGAQFGVVLVPVPDEPEC 78 Query: 51 -----HPQTHEEYALAR-TERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDD- 102 HPQ+H + T R G G +D++RRD TIN + D Sbjct: 79 DPEATHPQSHHHGCIEVATFRSDGVYSDGRHPDEVRFSQDPREDVQRRDFTINGMLLDPL 138 Query: 103 -NGEIIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLA 158 + E++D G DL +++R + F ED LR+LR RFAAR+ + IA ET+A Sbjct: 139 NHDEVLDFVGGRADLAAKIIRTIGDPRQRFEEDKLRMLRAVRFAARFE---YEIAPETMA 195 Query: 159 LMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA 218 ++++++ ++ ++ ERV E LT + + F++L + G L + PEI + GV Sbjct: 196 VIQQLS--PQISVVSHERVRDELTKMLTEGHARRAFELLDESGLLIQVLPEIAKMKGVQQ 253 Query: 219 PAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPEL--WPRHHGHGPA 276 P ++HPE D IHTLM L + + + L HD+GK T R GH Sbjct: 254 PPQFHPEGDVWIHTLMLLEQLP-PNCSPTLAWGALLHDVGKPPTFRRAPDRIRFDGHVDV 312 Query: 277 GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKL--FDSIDAWRKPQR 334 GV++ E L +++R NE D + E H + T+ + D + + Sbjct: 313 GVRMTEVLGKQMRFSNEQLDQVSALVENHMKFAEVTHMRESTLKRFMRLPKFDEHMELHK 372 Query: 335 VEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELT 393 ++ A R ++ + V ++ G + G +E L+ Sbjct: 373 MD-----CLASHRNLGSYDFLKQKMEETQPKEIRPEPLVTGADLIALGHRPGPLFKEILS 427 Query: 394 R 394 Sbjct: 428 S 428 >UniRef50_A6GQU7 Polynucleotide adenylyltransferase region:Metal-dependent phosphohydrolase, HD subdomain n=1 Tax=Limnobacter sp. MED105 RepID=A6GQU7_9BURK Length = 393 Score = 293 bits (751), Expect = 6e-78, Method: Composition-based stats. Identities = 155/409 (37%), Positives = 213/409 (52%), Gaps = 46/409 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +K+Y+VGGAVRDAL+G DRDWVVVG+T ML AG+ VG DFPVFLHP+THEEYAL Sbjct: 26 VKVYVVGGAVRDALMGRASSDRDWVVVGATVDHMLAAGFTPVGSDFPVFLHPRTHEEYAL 85 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GY GFT +A P VTLE+DL RRD T+NA+A + G +IDP+ GL DL+N+ Sbjct: 86 ARTERKSGHGYKGFTFHAEPSVTLEEDLARRDFTVNAMAMNAEGGLIDPFQGLADLENKC 145 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 +RHVSPAF EDPLRVLR+ARF AR+ L F +A+ET+ L RE+ +GEL+HL PERV+ E Sbjct: 146 MRHVSPAFSEDPLRVLRLARFLARF--LDFSVAEETMDLCRELQASGELKHLVPERVYAE 203 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 + P +++ E+ VP + PE D L +LS A Sbjct: 204 LTKGMGEEKPSRMIKLISKLNGWG----ELAPACSVPFSSFDKPEYDC----LNSLSGAE 255 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 A + LG L + ++ L + R+P I DL+ L Sbjct: 256 ----------ARWVYSLGFFL---------------SLAHIKALAKAWRLPRTIEDLSVL 290 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + +P + + F +D +RKP R+ Q+ A + G + Sbjct: 291 ACHCLAFVQQ-QSTDPDSFARFFGQVDLYRKPARLRQVNQLV-AQIHGEGRVHAFVEQAV 348 Query: 361 RWLREAWEVA---QSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 L + A + + G ++ + R+A V + Sbjct: 349 AELEQGHYKAFLGDKIVNHPL------GEQVAQVAANARLAWVEELHSK 391 >UniRef50_C9XLQ0 Putative poly(A) polymerase n=6 Tax=Clostridium difficile RepID=C9XLQ0_CLODC Length = 470 Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats. Identities = 100/415 (24%), Positives = 180/415 (43%), Gaps = 41/415 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYA 59 + Y+VGG VRD LL D D + + P+ +++ + + G HE + Sbjct: 48 EAYVVGGCVRDCLLERVPNDWD-ITTSARPEVVVELFEKTIPTGIQHGTVTVMIEHEPFE 106 Query: 60 LARTERKSGSGYTGFTCYA-APDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + T R G+ G + + DL RRD TIN++A + ++DP+NG D+QN Sbjct: 107 V-TTYRIDGNYSDGRHPDSIEFTNNIVKDLSRRDFTINSIAYNSKTGLVDPFNGYEDIQN 165 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 + +R V F ED LR+LR RF+A+ L F+IA+ T + + A +++++ E Sbjct: 166 KYIRCVGNPVDRFEEDALRMLRAVRFSAQ---LNFKIAEGTKQSIHK--KADLIKNVSIE 220 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E L + + + +L+ G L+ + PEI L V +H D HTL++ Sbjct: 221 RIQTEFNKILVSDSSK--LNLLKSTGLLKFIIPEICELEDVTQHNPYHI-YDVQKHTLIS 277 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGL---TPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 ++ ++ ++ L HDLGK + T + H VK+ +++ +RL+ N Sbjct: 278 ---TEVIEDELYLKLTMLFHDLGKKVTKTTDKNGVDHFYTHSRESVKIAKKILRRLKYDN 334 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 + ++ ++HD K I KL + ++ + E L + AD + Sbjct: 335 YTINKVLILIQYHDY---RIEPKRKIIKKLLNKLE---DVELFEDLIKVNWADTLAKNPK 388 Query: 353 --ESADYPQGRWLREAWEVAQS----------VPTKAVVEAGFK-GVEIREELTR 394 + +E + + K ++ G K G +I L + Sbjct: 389 YAKQKILNLIECEKEFKHIINQKECFNLKDLAINGKDLISIGIKPGKDIGHILNK 443 >UniRef50_C4V4H3 Possible tRNA adenylyltransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V4H3_9FIRM Length = 421 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 139/407 (34%), Positives = 193/407 (47%), Gaps = 22/407 (5%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTH--EE 57 +++ VGG VRD G KD D+V+ G T ++ +++GR FPV+ E Sbjct: 27 RVFRVGGCVRDCFRGAEAKDVDYVLTGITKEKFCALFPCAEKIGRTFPVYHVRINGMCCE 86 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 A AR E K+G GY GF P V++E+DL RRD T+NA+A + G ++DPY G D+ Sbjct: 87 VAFARREVKTGMGYHGFDVEFDPSVSIEEDLYRRDTTMNAMAVELPAGTLLDPYGGRADI 146 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 ++R VSP F EDP+R R A + A G+R+ ETL M A EL H ER Sbjct: 147 AAGIIRAVSPHFSEDPVR---ALRAARQAAEFGYRVEKETLGQMHAC--AEELGHEPSER 201 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + E AL T P VFF+VL L V FPEI AL G P ++HPE D HT+ L Sbjct: 202 LMGELRRALMTPRPSVFFRVLHAAELLTVTFPEIAALVGQTQPTEFHPEGDAYAHTMAML 261 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 + A S + VRF L HDLGKG TP E+ P H+ H G++ + QR+ +P++ + Sbjct: 262 DVVAERSDNIIVRFCALVHDLGKGRTPQEMLPHHYRHEETGLEALASWNQRMTLPHDWKK 321 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 A V H +P IV L I++ V + AD + Sbjct: 322 AAAFVIRQHMRAPRLT--HPGKIVDLLFGIES--SGLSVADFNVVIRADHGSLPRY---- 373 Query: 357 YPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASW 403 R ++V + +G EI L IA + Sbjct: 374 ---LRCGEAYLTAMRTVTGRD-APPALRGAEIGAWLRTAHIAILKKL 416 >UniRef50_C9KIT0 tRNA nucleotidyltransferase n=3 Tax=Veillonellaceae RepID=C9KIT0_9FIRM Length = 423 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 138/404 (34%), Positives = 193/404 (47%), Gaps = 20/404 (4%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTP--QEMLDAGYQQVGRDFPVFLHPQTH--EE 57 ++++VGG VRDAL + D+D++V G + L Q+VG FPV+L E Sbjct: 16 RVFIVGGWVRDALRHVRPHDKDYMVSGIAEVDFQQLFPDAQKVGHGFPVYLVSIDGCLSE 75 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 A AR ERK G GY GF P VT+E+DL RRD T+N++A + +IDPY+G D+ Sbjct: 76 VAFARKERKEGQGYRGFRVSYDPSVTVEEDLYRRDTTMNSMALELPAKTLIDPYHGARDV 135 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 + ++R VSP F EDP+R R A + A GF IA++T M EL+H ER Sbjct: 136 EKGIIRAVSPHFMEDPVR---ALRAARQAAEFGFSIAEQTSRYMHACRE--ELQHEPQER 190 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + E AL P VFF+ L G L V FPE+ L G P ++HPE D HTL+ + Sbjct: 191 IIAELRRALQAERPSVFFRALERAGILSVTFPELSLLIGKTQPPEYHPEGDAWQHTLLVV 250 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 AA + V RFA L HDLGKG TP + P H+GH G++ + +R+ +P + Sbjct: 251 DGAASKTANVAARFAALVHDLGKGTTPKAMEPHHYGHEQRGLEQLAAWDRRVTLPKDWLR 310 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 R + E H P I L +ID R + EAD + Sbjct: 311 AGRFLIEQHMRAPLLE--RPGKIAALLLAIDKQRSVLTLADFNAVIEADHHSLPDY---- 364 Query: 357 YPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 R + K + +G I + L R+ A + Sbjct: 365 ---LRHGERLLAAMHGISGKDAPKE-LRGRAIGQWLAGRQTARL 404 >UniRef50_B8QTX7 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Erwinia phage phiEa21-4 RepID=B8QTX7_9CAUD Length = 422 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 135/392 (34%), Positives = 187/392 (47%), Gaps = 30/392 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M +LVGG++RDA+ G D D+VVV +T +++LD G ++VG+ FPVF+ E A+ Sbjct: 1 MDFFLVGGSIRDAVFGKASSDHDFVVVNATEEQLLDLGLKKVGKAFPVFI-TDDGTEIAM 59 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA-------QDDNGEIIDPYNGL 113 AR E +G GY F VTL++DL RRD TINA A + + I Sbjct: 60 ARRENSTGEGYNDFEVETD-GVTLDEDLLRRDFTINACASAVVNGGANTDELICAHPMSR 118 Query: 114 GDLQNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 DL +R+LR V F EDPLR+LR RFAAR+ I ET AL R+M A L HL Sbjct: 119 YDLAHRILRVVDADRFKEDPLRILRGLRFAARH---NLFIEPETKALFRQMIEANCLAHL 175 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ER+WKE E A + N F + CG LFPEI + GV P K+HPE D HT Sbjct: 176 PKERIWKEIEKAASAENFWKFVSL---CGKFN-LFPEISGMKGVRQPKKYHPEGDVLNHT 231 Query: 233 LMTLSMAAMLS---------PQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQ 283 ++ L + +V LCHD+GK LT E HGH + V+ + Sbjct: 232 VLALKHYEEVELPQYGWNSGDRVTQSLCILCHDMGKRLTLSE-RGNLHGHE-SDVRDLLS 289 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 +R+ P +R + AE H +H + + + + + V L +T Sbjct: 290 FVERIGAPKSVRVATQFCAEQHHRVHGMFVRRANRLALWLEEHNQFNNQAIVNALCMTCV 349 Query: 344 ADVRGRTGFESADYPQGRWLREAWEVAQSVPT 375 +D R + Y Q L EA + + Sbjct: 350 SDANAR--LQKVPYLQMNMLAEAVSQTRKLSP 379 >UniRef50_D1VT34 tRNA adenylyltransferase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT34_9FIRM Length = 445 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 94/409 (22%), Positives = 161/409 (39%), Gaps = 31/409 (7%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ----QVGRDFPVFLHPQTH-- 55 K Y+VGG +RD LLG+ D D + + P ++ + + G + Sbjct: 18 KSYIVGGCLRDILLGIRPNDFD-ITTNARPSQVKEVFREYKIFHYGIKYGTITVEYRDRL 76 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 E R+E +++DDL RRD TINA+A D + I DP+NG+ D Sbjct: 77 YEITTFRSEGTYSDNRRPDRVLFLD--SIDDDLARRDFTINAMAMDKSYNIYDPFNGIRD 134 Query: 116 LQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L+N+++R A ED LR+LR RFA R+ F + +E + + L+++ Sbjct: 135 LKNKIIRACGDANKRIEEDALRILRAIRFATRFK---FYLDEELFDAI--SLNRNLLKNI 189 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ER++ E +T NP F ++ + G L +LFP + G WH + H Sbjct: 190 ARERIFSEICKIITYDNPSYGFLLMEETGILDILFPSLRKTVGFDQKTPWHDR-NLFDHL 248 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLR 289 L + + + +RFA + HD+ K LT + GH G + E + + + Sbjct: 249 LCVMD---NVPNDLAIRFAAIFHDIAKPLTLKIDGDGTGHFLGHDALGATMAEDILKYYK 305 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEA----- 344 P + + ++ + H + ++ K + + + E L Sbjct: 306 APKALIEKVSILIKEHMKVQ--EVMTDKALRRQIKRVGRENILDLYELLYADCVCTRYDR 363 Query: 345 DVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELT 393 D + E + ++E GF G I + L Sbjct: 364 DGSFILNRKKRIEELLDEKEMKKEKFLEINGYDLIELGFHGKIIGQILK 412 >UniRef50_C1XKS4 Uncharacterized domain HDIG-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XKS4_MEIRU Length = 426 Score = 291 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 121/369 (32%), Positives = 162/369 (43%), Gaps = 26/369 (7%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT----HEEY 58 +YLVGGAVRD LLG +D D+ + P+ ++ Q P L T + + Sbjct: 16 LYLVGGAVRDILLGETPEDLDF-ATSAPPEVVMRLAKAQGLEAIPTGLEHGTVTILIDHH 74 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 T + G A ++E+DL RRD TI A+A D G +IDPY G DL+ Sbjct: 75 PYEVTTFRRDVETYGRKARVAWGQSIEEDLARRDFTIGAIAMDAAGRVIDPYGGQQDLEA 134 Query: 119 RLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +LR V F ED LRV+R RFAARY GF I TL R L H+ E Sbjct: 135 GVLRAVGDPAQRFREDYLRVIRAGRFAARY---GFEIEPRTLQAARAAAP-EVLSHVAIE 190 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 RV E + A P F + L D L+ L PE + + +WHPE D H L Sbjct: 191 RVTAEFDKAFQNGTPSRFLRYLYDLEILQRLIPEFEDTHLLLQNPRWHPEGDVLTHVLQV 250 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 + A R+ L HD+GK T PE W +GH G L+ ++ + LR+PN Sbjct: 251 VDRA-----PPPYRWHALLHDIGKKDTARWRPEGWYSFYGHERVGAGLIPRIARDLRLPN 305 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 +RD + H + F P I K A P + L EAD GR Sbjct: 306 HLRDELVVTTALHM-VPVFTKPTPAAIRKF----QAQAGPH-LPALRALYEADGAGRRSK 359 Query: 353 ESADYPQGR 361 ES + + + Sbjct: 360 ESWKFFEPQ 368 >UniRef50_C6DY30 Poly A polymerase family protein n=2 Tax=Clostridium botulinum D str. 1873 RepID=C6DY30_CLOBO Length = 470 Score = 291 bits (744), Expect = 4e-77, Method: Composition-based stats. Identities = 97/418 (23%), Positives = 173/418 (41%), Gaps = 48/418 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT------- 54 + Y+VGG VRD+LL D D + + P E+++ P L T Sbjct: 52 EAYIVGGCVRDSLLEKKPNDWD-ITTSALPNEVINIFKNLGYTILPTGLKHGTVTIVINN 110 Query: 55 -HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGL 113 H E R + + + L++DL RRD TIN++A + +ID +N Sbjct: 111 EHYEVTTYRIDGEYEDNRHPNEVEFTRN--LKEDLNRRDFTINSMAYNHKDGLIDYFNSK 168 Query: 114 GDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 DL +R+++ V F ED LR+LR RFAA+ L F+I ++TL R++ G L+ Sbjct: 169 NDLDSRIIKCVGDPVKRFSEDALRILRAYRFAAQ---LDFKIENKTLNATRQLK--GNLK 223 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGI 230 +++ ER+ E L T F L G L+++FPE+ V + +H + + Sbjct: 224 NISIERIRDEINKILLTD--STIFFQLYKFGILKIIFPELHQCHNVEQNSPYHMK-NLFN 280 Query: 231 HTLMTLSMAAMLSPQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLCQR 287 H ++ + P++ ++ L H + T + H H +++ +R Sbjct: 281 H---IINSVLNIEPKLHLKLTMLLHAICTVQCKTTDEKGIDYFHNHEELSSYKAKKILKR 337 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 ++ N + ++ ++H+ + + K+I KL I L EAD++ Sbjct: 338 MKYDNNTINKVSILIKYHNR----KIDSNKSIRKLLSLIGE----DNFRDLLKVKEADIK 389 Query: 348 GRTG-----FESADYPQGRWLREAWEVAQ-------SVPTKAVVEAGFKGVEIREELT 393 + + L E Q V + ++E G+ G +I + L Sbjct: 390 AQNLKYYHERHNKLIEIEARLNEILSKNQCFLLKDLKVNGRDLLELGYSGKDIGDILN 447 >UniRef50_A1AVM9 Polynucleotide adenylyltransferase region n=3 Tax=Gammaproteobacteria RepID=A1AVM9_RUTMC Length = 362 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 149/391 (38%), Positives = 213/391 (54%), Gaps = 40/391 (10%) Query: 1 MKIYLVGGAVRDALLGL--PVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEY 58 MK+YLVGGAVRD LLG+ ++DW+VVGS+ ++MLD GY+QVG++FPVFLHP T EEY Sbjct: 1 MKVYLVGGAVRDQLLGIADEFTEKDWMVVGSSSKQMLDLGYRQVGKNFPVFLHPGTQEEY 60 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 ALAR ERK G+GY GF + VTLE DL RRDLTINA+AQ GE+ DP+NG DL N Sbjct: 61 ALARLERKIGTGYKGFKFDISSQVTLEQDLFRRDLTINAMAQ-KAGELFDPFNGQEDLNN 119 Query: 119 RLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 +LRHVS AF EDP+R+LR+ARFAAR+ GF++A +T LM +M +GE++ LTPERV+ Sbjct: 120 GILRHVSNAFSEDPVRILRIARFAARFKKFGFKVAHQTHQLMSQMVTSGEVDALTPERVF 179 Query: 179 KETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSM 238 KE AL+ P FF+VL CGA + +F +D V H+ + + Sbjct: 180 KELNKALSYETPSAFFKVLTACGAYQKVFSSLDN--QVHQN-----------HSNSFVFL 226 Query: 239 AAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLA 298 + + + ++F+ D + H ++ LC ++ P + + L+ Sbjct: 227 DNLNTDKAHIKFSIWLKDENR-------------HN------IKALCNIIKCPKQYQQLS 267 Query: 299 RLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES---- 354 LV++F+ F + + F D R R E L T + E Sbjct: 268 ELVSQFYQFSQDFTNHSSNEVFDFFAKTDILRHKDRFEDLLSTFKLLEIDIVPIEHLRDL 327 Query: 355 -ADYPQGRWLREAWEVAQSVPTKAVVEAGFK 384 D + + A + + +++ FK Sbjct: 328 LKDINISKLDKSDIAKAIQIEKRLIIDLFFK 358 >UniRef50_B8I4X8 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=25 Tax=Clostridiales RepID=B8I4X8_CLOCE Length = 448 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 98/412 (23%), Positives = 168/412 (40%), Gaps = 40/412 (9%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 YLVGG VRD++L D D + + P ++ + E L Sbjct: 27 AYLVGGCVRDSILCKAPYDWD-ITTNALPIDIKSIFDRTYDTGIKHGTVTVLIGEMCLEV 85 Query: 63 TERKSGSGYTGFTC--YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 T + Y F +L +DL RRD TINA+A ++D + GL DL+ R+ Sbjct: 86 TTYRIDGDYKDFRRPDKVEFTSSLREDLARRDFTINAMAYHPEQGLVDFFGGLQDLKKRI 145 Query: 121 LRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 ++ V F ED LR++R RF+A+ LGF I + T ++ +++ + +++ ER+ Sbjct: 146 IKAVGDPEQRFREDALRMMRAIRFSAQ---LGFEIEEATFEAIK--SNSALIANISSERI 200 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 E L + NP+ F L G L + PE + + +H + HT+ + Sbjct: 201 RDELNKTLVSENPEH-FNYLHQTGILPYILPEFERCYKTEQINPYHV-YNVADHTMYAVK 258 Query: 238 MAAMLSPQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + +R+ L HD+GK T + +GH ++ E++ RLR E Sbjct: 259 ---SIENDHILRWTVLLHDVGKPPRKTTDSKGIDHFYGHQAVSSQIAEKVLNRLRFDKES 315 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT---- 350 L+ ++HD+ PK+I K + I + L +AD + Sbjct: 316 IKKIVLLVKYHDM---DIEDTPKSIRKAVNKIGD----ELFPLLLKVQKADKMAQNPKFL 368 Query: 351 -------GFESADYPQGRWLREAWEVAQ-SVPTKAVVE-AGFK-GVEIREEL 392 Y + ++ +V +++ G K G++IRE L Sbjct: 369 AERIVKWNRIEKIYSDIKSEQQCLSKKDMAVNGDDLIQLLGMKPGIQIREML 420 >UniRef50_Q1Q5Z9 Similar to poly(A) polymerase n=2 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5Z9_9BACT Length = 437 Score = 289 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 102/427 (23%), Positives = 177/427 (41%), Gaps = 31/427 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLHPQTHEEY 58 GG VRD ++ D D + + P ++++ + VG + V + + + Sbjct: 19 FDALFAGGCVRDMIMRRESADYD-IATNALPHDVMNLFKKTFSVGTQYGVVVVVKDGHNF 77 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQ 117 +A T R S G T E+D++RRD TIN L D E++D G D+ Sbjct: 78 EVA-TFRTEKSYSDGRHPDYVSFSTAEEDVRRRDFTINGLLYDPVKKEMLDYVGGRDDIA 136 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++R + ED LR++R RFA R+ F I +ET + + A ++ ++ Sbjct: 137 AGIIRTIGDPVERLTEDKLRMIRAVRFACRF---NFHIHEETRQAIINL--APQIHVVSA 191 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ +E + +T NP + Q+L + LR + PE+ + GV P +HPE D HTL+ Sbjct: 192 ERIREELQKIITGPNPHLGIQLLDELCLLREILPEVSEMKGVRQPENFHPEGDVFTHTLL 251 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPEL-WPRHHGHGPAGVKLVEQLCQRLRVPNE 293 LS +P + L HD+GK T EL R + H G + ++C RL+ N Sbjct: 252 CLSKME--NPSWTLAMGVLLHDMGKPRTFQELDRIRFNLHEKVGADITAKICNRLKTSNA 309 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 ++ + H + + +LF + ++L D +G Sbjct: 310 DKERIIWLVLKHLCFKDAKKMRLNKLKRLFAH-------EAYKELEELCRIDALASSGDL 362 Query: 354 SADYPQGRWL----REAWEVAQSVPTKAVVEAGFK-GVEIREELTR---RRIAAVASWKE 405 S Y +E + + ++ G G + LT+ ++ + KE Sbjct: 363 SDYYFCREMFEKLSKEEVKPKPLITGHDLIAIGLTPGPAFKHILTKIEDEQLDGNITTKE 422 Query: 406 QRCPKPE 412 + K + Sbjct: 423 EALKKAQ 429 >UniRef50_A5UUL6 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=2 Tax=Roseiflexus RepID=A5UUL6_ROSS1 Length = 459 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 138/417 (33%), Positives = 185/417 (44%), Gaps = 37/417 (8%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY-----QQVGRDFPVFLHPQTHEEYA 59 LVGGAVRD LLGL D D V G Q + A VGR F V E Sbjct: 29 LVGGAVRDLLLGLTPTDIDIEVYGVDGQTLAAALAPFGRVNVVGRSFGVLKMRLDEYEVD 88 Query: 60 LARTERKSG--SGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 +A R+ TG P +T + L RRD TINALA +G++ID + G DL+ Sbjct: 89 VALPSRRHPLPDEETGALPDYDPSLTPREALARRDFTINALALTPSGDLIDYFGGRADLE 148 Query: 118 NRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R+LRH S AFG+DPLRVLR +FAAR+A R+A ET AL R + L P+R+ Sbjct: 149 ARVLRHTSEAFGDDPLRVLRAMQFAARFA---MRLAPETAALCRTLLSQA--AGLPPDRI 203 Query: 178 WKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 W+E + AL P + L + G L L+PE+ AL G P ++HPE D HTL Sbjct: 204 WREWQKWALLGVFPSAGLRALDESGWLA-LYPELAALQGCPQHPRYHPEGDVWTHTLHVC 262 Query: 237 SMAAMLSP--------QVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLC 285 A ++ ++ + A LCHDLGK T + PR GH AGV L + Sbjct: 263 DAAVRIADRDALDGHERLTLIVAALCHDLGKPPTTVIDDDGIPRSIGHSEAGVSLTQTFL 322 Query: 286 QRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEAD 345 R+ P+ I + H L H P+ + +L + P ++Q EAD Sbjct: 323 VRIGAPHWIERRVTPLVREH-LAHLNVQPTPRVVRRLAHRLA----PATLQQWERLVEAD 377 Query: 346 VRGR------TGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRR 395 GR + A V + ++ AG G + L R Sbjct: 378 ASGRPPCPPDRPAAAFLAVAEAEGAAMSRPAPLVRGRDLIAAGVAPGPRLGALLRRA 434 >UniRef50_C8PQT7 tRNA adenylyltransferase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQT7_9SPIO Length = 456 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 96/400 (24%), Positives = 159/400 (39%), Gaps = 26/400 (6%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDF----PVFLHPQTHE 56 YLVGGAVRD L D D + + PQE++ + + ++ H Sbjct: 23 FSAYLVGGAVRDFFLKKAASDWD-IATDAQPQEVMRLFRRTIPTGIEHGTVTIIYKSKHI 81 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 E RTE G T+E+DL RRD T+NA+A +G I DP+NG D Sbjct: 82 ECTTFRTEADYTDGRHPAAVSYT--ATIEEDLSRRDFTMNAIAVSLPDGIIADPFNGCAD 139 Query: 116 LQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 ++ +R V F ED LR +R RFAA+ LGF I +TL + + H + + Sbjct: 140 IRAGRIRTVGNPLDRFLEDGLRPVRAVRFAAQ---LGFAIDGKTLEAIPQALHIT--QKI 194 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER +E L P +++ G L + PE+ GV + H D H+ Sbjct: 195 SIERFREEFTKMLACPAPLTGLRLMESTGLLNLFIPELAECRGVEQGSFHH--FDVLDHS 252 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPP---ELWPRHHGHGPAGVKLVEQLCQRLR 289 + + + +R A L HD+GK T + + H K+ + +RL+ Sbjct: 253 FLVCNACPAGMEHIHIRLAGLFHDIGKPATRKQAADGSYTFYRHEAVSEKITRSIMRRLK 312 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 N + + H H P + + + + ++ L +ADV G Sbjct: 313 YSNAEIEKTAHLVAQHM-FHYDPSWTDAAVRRFIVRVG----KENIDDLFALRKADVFGL 367 Query: 350 TGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIR 389 TG + + ++ + ++ + G ++ Sbjct: 368 TGSYTEPNFLVEFTARIDKILKEDGAYSLKDLAVNGKDLM 407 >UniRef50_Q2LST9 Poly A polymerase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LST9_SYNAS Length = 495 Score = 286 bits (733), Expect = 8e-76, Method: Composition-based stats. Identities = 113/413 (27%), Positives = 172/413 (41%), Gaps = 45/413 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG--RDFPVFLHPQTHEEYA 59 + + VGG VRD L G+ D D +V ++P+ + + VG F + + + + Sbjct: 84 EAWFVGGCVRDYLRGVEAGDYD-IVTSASPEAIQALFPRTVGVGIRFGILIVIENGYSHE 142 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN-GEIIDPYNGLGDLQN 118 +A Y +P LE D+ RRD TINA+ QD + G IID G DL+ Sbjct: 143 VAT--------------YRSPGGYLE-DVLRRDFTINAMLQDPDTGRIIDEVGGRADLEG 187 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 R++R V F ED LR+LR RFAA +L F + ETL ++ HA E++ ++ E Sbjct: 188 RVIRAVGRPDERFAEDRLRMLRAVRFAA---NLAFSVEQETLEAIQ--AHAPEIQEVSVE 242 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 RV E LT ++L G L L PE+ A+ GV P K+HPE D HT+ Sbjct: 243 RVADELTRLLTLGGAGEGMRLLMKTGLLEELLPEVAAMRGVKQPPKFHPEGDVWTHTVKM 302 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPE--LWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 L + + + + + L HD+GK +GH G L E + +RLR P Sbjct: 303 LDLMS-IPADSRLAWGVLLHDVGKPDVQSRDHRGIHFYGHVQQGEILAEGILRRLRFPRA 361 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG-- 351 + + H + + +L + + L D G G Sbjct: 362 DMECILGLIRCHMSFINVREMRTSRLKRLL-------RSPDFDLLLELHRLDCLGSNGVL 414 Query: 352 --FESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 +E Q E + K ++E G+ + L R + AV Sbjct: 415 DSYEYCLQKQRELTDEQLRPPPLLRGKDLLEMGY----LPGALFREILNAVED 463 >UniRef50_Q7P2R0 POLY(A) POLYMERASE n=10 Tax=Fusobacterium RepID=Q7P2R0_FUSNV Length = 451 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 102/409 (24%), Positives = 179/409 (43%), Gaps = 37/409 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVV---VGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 Y+VGGA+RD LLGL KD D+ G+ + ++ G+ F V + +Y + Sbjct: 27 YIVGGAIRDILLGLKPKDVDFTTNLPYGTLKTLFSEYTPKETGKSFGVLRIRINNIDYEI 86 Query: 61 AR-----TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 A+ E K G + + +DL RRD TINA+A + IID YNG D Sbjct: 87 AKFRKDNYEEKDGLKIIPEEKKVSFVDDIRNDLARRDFTINAMAYNQKEGIIDLYNGQKD 146 Query: 116 LQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 ++NR++ V EDPLRVLR RF +R L F +++ T+ +++ L+++ Sbjct: 147 IENRIINFVGKSEERIIEDPLRVLRAFRFMSR---LNFSLSENTIEAIKK--QKELLKNI 201 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER+ E L +N + +++D G L ++ PE A + H +D H Sbjct: 202 SEERITMEFSKLLLGKNIKNTLTLMKDTGVLELIIPEFKATYDFNQCNPHH-NLDLFNH- 259 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLR 289 +++ + + +++R++ L HD+ K + E + H G + + R++ Sbjct: 260 --IINVVSKVPADLELRYSALLHDIAKPIVQTFDEEGIAHYKTHEIVGADMARDILTRMK 317 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 VP + D + + H ++ + + K KL + + +L AD + Sbjct: 318 VPVKFIDTVVEIIKKHMIL--YRDVTDKKFNKLLSEMGY----NNLWRLIEHCNADNESK 371 Query: 350 TG-FESADYPQGRWLREAWEV-------AQSVPTKAVVEAGFKGVEIRE 390 S + L+ A E +V K ++E F G EI + Sbjct: 372 NNEVVSTENDLHERLKRAVEKQMQVTVNDLAVNGKDLIELDFTGTEIGK 420 >UniRef50_Q73NW9 PolyA polymerase family protein n=1 Tax=Treponema denticola RepID=Q73NW9_TREDE Length = 448 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 102/401 (25%), Positives = 167/401 (41%), Gaps = 28/401 (6%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHE 56 YLVGGAVRD LG P KD D + + P+E+ + + L+ Sbjct: 21 FSAYLVGGAVRDWFLGKPCKDYD-IATDAEPKEVQALFRKTIPTGIAHGTVTILYKDEKI 79 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 E R E G + ++E+DL RRD T+NA+A +G I+DP++G+ Sbjct: 80 ECTTFRCEADYSDGRRPQSVNYVR--SIEEDLSRRDFTMNAIAVSLKDGSIVDPFDGVKS 137 Query: 116 LQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 ++++ ++ V FGED LR +R RFA++ LGF+I +ETL + + + Sbjct: 138 IKSKTIKTVGSPLDRFGEDGLRPIRAIRFASQ---LGFKIEEETLKAIPLSIEVC--KKV 192 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER E L + +P + ++L D G L+V PE+ GV D H+ Sbjct: 193 SIERFRDEFVKMLLSEHPIISLKLLEDTGLLKVFLPELSDCRGVEQKGMH--SFDVLDHS 250 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPE---LWPRHHGHGPAGVKLVEQLCQRLR 289 ++ A +P VR A L HD+GK T + + H KL +++ QRL+ Sbjct: 251 FLSCDAAPQDNP--IVRLAALFHDIGKVSTREKNEYGDYTFYKHEAVSEKLTKKIMQRLK 308 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 PN+ + + H H + + + + L AD G Sbjct: 309 FPNKEIEEVSHLVGLHM-FHYTEDWTDAAVRRFIVRAGV----ENIPNLFDLRRADGFGM 363 Query: 350 TGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIRE 390 TG + + +V ++ + G E+ E Sbjct: 364 TGQAPDLSNLAAFKKRLEKVIAEDSALSLKDLAVGGRELME 404 >UniRef50_C8W673 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=38 Tax=Bacteria RepID=C8W673_DESAS Length = 584 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 103/411 (25%), Positives = 172/411 (41%), Gaps = 44/411 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 + +LVGG VRD L+G D D + + QE+L + V + + + Sbjct: 20 QAFLVGGCVRDLLMGSEPADYD-IATSAAAQEILSLFGKTVPIGERHGTISVLLDGFTVE 78 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 + K G+ P LE DL RD TINA+A D G DP+ G DL+ +++ Sbjct: 79 VSTFK------GYVREEGPGG-LEKDLSLRDFTINAMAIDGEGGFYDPFGGQKDLEQKII 131 Query: 122 RHVSP----AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R F EDPLR++R RF + GF + +T + + ++ PERV Sbjct: 132 RSPGNEPEQRFIEDPLRMMRAIRFCCSF---GFSLHPDTNKAI--AKNHALIQRSAPERV 186 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 +E L + P + ++L + G LR + PE +L K H + D HT+ L Sbjct: 187 REELNRILISDLPSLGIRLLAETGLLRHVMPEAISLVNFDQRDKPHSK-DVFEHTMAVLE 245 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 P+++VR A L HD+GK LT + +G+ G +++E + +RLR N+ Sbjct: 246 AT---PPRLNVRLAALLHDIGKTLTFSADERVTGHFYGYSLKGCRVIESILKRLRYDNKT 302 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + ++ H FP L ++ +L + ++ L A++ Sbjct: 303 IENVSVLVGEHM--SCFPKLRDVSLKRLVKRVGE----HNLDDLFDLQRANILVSATP-- 354 Query: 355 ADYPQGRWLREAWEVAQS-----------VPTKAVVEAGF-KGVEIREELT 393 D+ +R+ E + V + ++ GF G E+ L Sbjct: 355 FDFSDLDAMRQGIERILNEKSPLRIKDLAVNGRDLIAIGFRSGPEMGRMLE 405 >UniRef50_C0R197 PolyA polymerase n=2 Tax=Brachyspira RepID=C0R197_BRAHW Length = 464 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 102/401 (25%), Positives = 177/401 (44%), Gaps = 34/401 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPV----FLHPQTHE 56 + +LVGGAVRD+++G+ + D + + P+++ + + H Sbjct: 24 FQCFLVGGAVRDSIMGITPHEYD-ITTDARPEDVQRIFKYTIPTGIKHGTILVIIEDMHV 82 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 E R++ G A ++E+DL RRDLTINA+A + +G +ID ++G+ D Sbjct: 83 EITTFRSDGNYSDGRHPDHVEYA--TSIEEDLPRRDLTINAMAYNILDGSLIDMFDGMKD 140 Query: 116 LQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 ++ ++++ V F ED LR++R RFA + L F I ET + T G L + Sbjct: 141 IKKKIVKSVGNPYERFSEDGLRIMRAIRFATK---LDFDIEKETFDAITHST--GMLASI 195 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ER+ +E L ++NP ++LR G L ++ PE+ FGV K+H D H Sbjct: 196 AAERIREEFNGILLSKNPFRGLELLRKTGVLSLILPELMQGFGVNQN-KFHK-YDVYYHI 253 Query: 233 LMTLSMAAMLSPQ---VDVRFATLCHDLGKGLTPPELW----PRHHGHGPAGVKLVEQLC 285 L T+ L + + VR A L HD+ K + ++ P ++ H G + +++ Sbjct: 254 LHTIQSVEPLETEELTLLVRLAALFHDIAKPMVQKKVSKQDDPVYYNHEVVGANIAKKIM 313 Query: 286 QRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEAD 345 +RL+ N D L+ H + + + +I + + L EAD Sbjct: 314 KRLKYSNSEIDFVTLLVRQHMFYYQ-DEWTDGAVRRFMRAIGV----ENIRPLLRLREAD 368 Query: 346 VRG---RTGFESADYPQ-GRWLREAWEVAQSVPTKAVVEAG 382 G R ES P+ + + E ++ K + G Sbjct: 369 RLGSGNRKDKESKAIPKLLARIDKIIEEENAITVKDLKIDG 409 >UniRef50_B5JPR9 tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPR9_9BACT Length = 473 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 135/372 (36%), Positives = 180/372 (48%), Gaps = 35/372 (9%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ-----VGRDFPVFL--HPQTH 55 +VGG++RDALLGL KD D V G + + VG+ F V Sbjct: 32 CRVVGGSIRDALLGLEPKDFDVEVYGLDLDSIAQTLAKLGKTDLVGKAFAVVKLWTHGEE 91 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLG 114 ++A+ R E KSGSG+ GFT ++ E+ LKRRD TINAL D E+ID +NGL Sbjct: 92 YDFAIPRRESKSGSGHRGFTIETDAHLSEEEALKRRDFTINALLYDHATSEVIDYFNGLE 151 Query: 115 DLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 DL+ R+LRHVSPAF EDPLRVLR +FA R+ + +T AL R++ H E L Sbjct: 152 DLERRILRHVSPAFSEDPLRVLRAMQFAGRFE---MELHPDTAALCRKIGH--EFWTLPK 206 Query: 175 ERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERVW E E A +R+ + L G LR FPE++AL +P +WHPE D HTL Sbjct: 207 ERVWTEWEKWAKRSRSLSHGLRALVASGWLRY-FPELNALRSLPQDPEWHPEGDAWTHTL 265 Query: 234 MTLSMAAMLSPQVD--------VRFATLCHDLGKGLTPPELWPR------HHGHGPAGVK 279 L + + F LCHDLGK R GH V Sbjct: 266 YCLDALVRDTDWSSLAEAERGVLAFGVLCHDLGKARCTRWALKRGEKHWISPGHDSQSVW 325 Query: 280 LVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPM--LNPKTIVKLFDSIDAWRKPQRVEQ 337 L EQ ++R P+E+RD + H ++T P + ++ +L + P + Sbjct: 326 LAEQFFNKMRAPHELRDKVMALVGNHHFLNTVPEGGHSDASLRRLAKRLS----PATTHE 381 Query: 338 LALTSEADVRGR 349 L AD RGR Sbjct: 382 LVYVMTADHRGR 393 >UniRef50_C3CTV2 Polynucleotide adenylyltransferase/metal-dependent phosphohydrolase n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CTV2_BACTU Length = 449 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 117/422 (27%), Positives = 188/422 (44%), Gaps = 43/422 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ-----QVGRDFPVFLHPQTHE 56 + + VGG VRD + KD D + G TP+ + Q + G F + Sbjct: 23 RTFYVGGYVRDMFMNKESKDIDVEIYGITPETLRTILSQFGYVDEFGAFFGILKIYGVDI 82 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 ++++ R E K+ G+TGF P + KRRD +NA+ D E+ID +NG+ D Sbjct: 83 DFSMPRKEVKTDDGHTGFDVVVDPFLDTLTASKRRDFRMNAIMVDVLTEEVIDHFNGVSD 142 Query: 116 LQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +Q ++RH+ F ED LR R +FA+R+ F IA+ET+ L + + L Sbjct: 143 IQLGIIRHIDEHTFIEDELRAFRACQFASRF---NFTIAEETIDLCKGFRFS-----LPR 194 Query: 175 ERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+++E + + P +FF +R+ ++ LFPE+DAL P +HPE D HT+ Sbjct: 195 ERIFEEFLKALMKSEKPSIFFSYMREMLIVKKLFPELDALIDCPQNPIFHPEGDVWTHTM 254 Query: 234 MTLSMAAML----SPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQLCQ 286 M + A L S + HD+GK +T + GH GV + +Q + Sbjct: 255 MVIDELASLKHLSSNPLAFMLLGPTHDMGKPITTVIQEDGQITARGHAEEGVPVAKQFLK 314 Query: 287 RLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 R+ + + E H ++ + K + KL + +E + L EAD Sbjct: 315 RITNDKRLIKNVLNMVENHMRPNSIAFGSDKAVRKLMVAT-------NIEDIVLFGEADH 367 Query: 347 RGRT-GFESADYPQGR-WLREAWEVAQS----------VPTKAVVEAGFK-GVEIREELT 393 +GR E DY + + W + E Q+ V K +++AG K G E L Sbjct: 368 KGRGISEEKKDYTEVKEWFHQKIEKLQTVGEQSTISPLVSGKDLIDAGLKPGKEFSILLK 427 Query: 394 RR 395 + Sbjct: 428 KA 429 >UniRef50_B0AC07 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AC07_9CLOT Length = 450 Score = 283 bits (724), Expect = 9e-75, Method: Composition-based stats. Identities = 122/403 (30%), Positives = 192/403 (47%), Gaps = 33/403 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG-----YQQVGRDFPVFLHPQTHE 56 + + VGG VRD +LG+ +KD D V ++++ Q++G F VF Sbjct: 22 RTFFVGGCVRDEILGIDIKDVDIEVHNIEVEDLVKILESIGDVQKIGSFFGVFNLKGYDI 81 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 + A+ R E+ +G G+ F + P + ++ RRD TIN+L +D +GEIID +NG+ D Sbjct: 82 DIAMPRKEKSNGRGHKDFEIFVDPFIGYKEAALRRDFTINSLMKDVLSGEIIDSFNGIED 141 Query: 116 LQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 L N+++RHV+ +F EDPLRV R ++FA+R+ F I ++T L M ++ L Sbjct: 142 LNNKIIRHVNDESFCEDPLRVFRGSQFASRF---DFEIYEKTKLLSSTM----DVSSLAF 194 Query: 175 ERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERV+ E + L P +FF+ L+D L F E++ L G+ HPE D HT+ Sbjct: 195 ERVFDELKKALLKANKPSIFFKSLKDMNQLSYWFKEVEDLIGINQSEIHHPEGDVFTHTM 254 Query: 234 MTLSMAAMLSP----QVDVRFATLCHDLGKGLTP--PELWPRHHGHGPAGVKLVEQLCQR 287 M L AA L ++ A LCHD GK +T + +GH V L + L R Sbjct: 255 MVLDEAAKLRDKAKNKLAFMLAALCHDFGKTVTTEIKKGKLTAYGHEVESVTLAKGLLDR 314 Query: 288 LRVPNEIRDLARLVAEFHDLIHT-FPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 L ++ + + H + + K+++KL W L L ++AD Sbjct: 315 LTNKISLKKETLNLIKLHMKPNQMYNSAKKKSMMKL------WDDAIHPSDLILLAKADA 368 Query: 347 RGRTGFESADYPQG---RWLREAWEVAQ--SVPTKAVVEAGFK 384 GR + + + L E E+ V K ++E G K Sbjct: 369 LGRGVKKDYSEIESILNKSLNEYKELMLEPEVVGKDLIELGLK 411 >UniRef50_C4GD15 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GD15_9FIRM Length = 461 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 106/417 (25%), Positives = 177/417 (42%), Gaps = 43/417 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY- 58 + Y VGG VRD++LG D D + + P+E+ + G H Y Sbjct: 28 EAYAVGGCVRDSVLGRIPDDWD-ITSSACPREIKALFSHTIDTGIQHGTVTVMLDHIGYE 86 Query: 59 -ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 R + + G T P +L +DLKRRD TINA+A + ++D ++G+GDL+ Sbjct: 87 LTTYRVDGEYLDGRHPRTVRYTP--SLTEDLKRRDFTINAMAYHPDRGLVDEFDGIGDLK 144 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +L+R V F ED LR+LR RFAA+ LGF + +T + +R++ A L+ ++ Sbjct: 145 RKLVRCVGDPHQRFTEDALRMLRAVRFAAQ---LGFGLDADTASAIRDL--AENLKKVSA 199 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E + + +P ++ + G V PE DA P H D G HTL+ Sbjct: 200 ERIRVELMKTICSPHP-ACLEMAYELGLTAVFLPEFDACMRTPQNTPHH-FTDVGHHTLL 257 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGL---TPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 + + +R A L HD+ K + T GH G ++ ++ +RLR Sbjct: 258 VMQ---GVPDDPVLRLAALLHDIAKPVCRTTDERGVDHFKGHPKEGARMAGEILRRLRFD 314 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 + D + +HD P ++ Q +L AD+ ++ Sbjct: 315 KDTTDRVVQLVCYHDE-------RPGADLRSVRRAMVRVGAQAFPRLFALKRADMLAQSD 367 Query: 352 F-------ESADYPQGRWLREAWEVAQS-----VPTKAVVEAGF-KGVEIREELTRR 395 + E D+ + R + A S + + ++E G +G + E L+ Sbjct: 368 YKREEKLGEIDDFERLREQILQKKEALSVGDLAISGRDLLEMGLPQGRLVGEVLSAL 424 >UniRef50_C1IAF4 PolyA polymerase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAF4_9CLOT Length = 448 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 90/391 (23%), Positives = 157/391 (40%), Gaps = 27/391 (6%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFP----VFLHPQTHE 56 + ++VGG VRD++L KD D + + P++ L + + L Sbjct: 21 FEAFMVGGCVRDSILNNSPKDYD-ITTSAKPEDTLSLFEKTIPTGIKHGTVTVLINNNSY 79 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE + D + DDL RRD TINALA + + ++D +NG+ D+ Sbjct: 80 EVTTYRTEGNYLDNRRPSSVNFVSD--IRDDLSRRDFTINALAYNKSAGLVDYFNGISDI 137 Query: 117 QNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +N ++R V A F ED LR+LR RF+ + L F I +ET + + + + +++ Sbjct: 138 KNSIIRCVGDADKRFKEDALRMLRAVRFSCQ---LNFDIEEETYNAI--LNNNKLISNIS 192 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E L + NP +L+D G L + PEI+ L H + HTL Sbjct: 193 FERIRDELCKILISDNPSKGLILLKDTGLLGAILPEINNLVNFTPKCNNHNN-NVFKHTL 251 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHH---GHGPAGVKLVEQLCQRLRV 290 + L HD+GK T + H G + ++ +LR Sbjct: 252 NVIDNTHNNLLLRLSA---LLHDVGKLNTLTHNENGFYYFPNHNIEGSLMTRKILSKLRF 308 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 N ++ + E H +++ + + KL ++I + + L AD+ Sbjct: 309 DNNTINIVCKLIEHHLVLNVNYLPTKFEVKKLLNTIG----KEYIYLLFDLQRADINSLD 364 Query: 351 GFESADYPQGRWLREAWEVAQSVPTKAVVEA 381 + + ++ S ++ Sbjct: 365 NPKIFL-AKVDYIDNLVSEILSNNEPLKIKD 394 >UniRef50_C7N8U3 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=3 Tax=Leptotrichia RepID=C7N8U3_LEPBD Length = 588 Score = 281 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 87/385 (22%), Positives = 167/385 (43%), Gaps = 26/385 (6%) Query: 4 YLVGGAVRDALLGLPVKDRDWVV---VGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +LVGGAVRD +L D D+ + D +++G F + + + Y + Sbjct: 23 FLVGGAVRDKILNKDPGDYDFATDIEYSELKRIFADYNPKEMGAHFGILMIKVNGKSYEI 82 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 A+ +++G + + T+E+DL RRD TIN+LA ++ I+D Y G D++ ++ Sbjct: 83 AKFRKETGVYNSRYPKEIKFVKTIEEDLSRRDFTINSLAYNEETGIVDLYGGKQDIKRKV 142 Query: 121 LRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +R V ED LR+LR RF ++ LGF + +T + L ++ ER+ Sbjct: 143 IRFVGKPKLRIEEDALRILRAFRFISK---LGFNLDKKTAEAI--CNKRKFLTKISKERI 197 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 + E L + ++ L ++ PE + H + D H + + Sbjct: 198 FDELSKILMGNFAKKALIEMKKLRVLEMIIPEFRYAYNFDQNNPIHTD-DLFNHIIKVIH 256 Query: 238 MAAMLSPQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + + RFA L HDLGK + + +GH + E+ + L+ NE Sbjct: 257 LCD---YDLITRFAALFHDLGKINAKIIDAKGIFHFYGHEKESALIAEEELRMLKASNET 313 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + + + + H LI + ++ KT+ KL ++ + +++L AD+ + Sbjct: 314 INSVKKIIKNHMLI--YEDVSDKTLKKLIIEMED----KNLKRLFNLFYADLNSKGIKSK 367 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVV 379 + Q L+ W+ +++ + + Sbjct: 368 KENEQ--ILKNFWDKIENIKKQGKI 390 >UniRef50_B1I1S2 Metal dependent phosphohydrolase n=2 Tax=Clostridia RepID=B1I1S2_DESAP Length = 490 Score = 281 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 112/382 (29%), Positives = 168/382 (43%), Gaps = 50/382 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ------QVGRDFPVFLHPQTH 55 + Y+VGGAVRD LLG K+ D V + P+E+L + + G F V Sbjct: 19 EAYVVGGAVRDLLLGREPKEFD-VCTDACPREVLTLAAENRIKAFKKGAAFGVISWILDD 77 Query: 56 EEYALA--RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGL 113 EE +A RTE + LEDDL RRD T+NA+A +G I+DP+ G Sbjct: 78 EEIEIATFRTEFYGNDAHRPEKVEFV--WALEDDLARRDFTVNAIAMRADGSIVDPFEGR 135 Query: 114 GDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 DL+ +LR V FGED LR+ R RF A Y GF +A ET A + H + Sbjct: 136 PDLEAGVLRAVGDPEERFGEDALRMFRACRFVAEY---GFTLAPETKAAIPRALH--RVA 190 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALR--------------VLFPEIDALFGV 216 L+ ERV E L + +++R+ G L + PE+ L GV Sbjct: 191 GLSVERVRDEIYRTLMAEHAAAGLELMRETGLLSADCRGRVNGFDTAVPVLPELARLAGV 250 Query: 217 PAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGL-----TPPELWPRHH 271 ++H + D HTL + + + + +R+A L HD+ KGL T P + Sbjct: 251 AQNPEYH-QFDVWEHTLRVV---SNVPAEPALRWAALLHDVAKGLPEVRGTNRRGLPTDY 306 Query: 272 GHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSI--DAW 329 GH G ++ ++ +RLR P + H FP L + +++ S+ D Sbjct: 307 GHARKGAQITGRIMERLRFPPAFARRVTWLVRNHM---RFPELEERFVLRWLKSLAPDFH 363 Query: 330 RKPQRVE---QLALTSEADVRG 348 + + +E + AD+ G Sbjct: 364 NRQELLEAVGECLALRRADLLG 385 >UniRef50_A3DF92 Metal dependent phosphohydrolase n=3 Tax=Clostridium thermocellum RepID=A3DF92_CLOTH Length = 442 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 107/414 (25%), Positives = 175/414 (42%), Gaps = 45/414 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 K Y+VGG +RDA+LG D D V + P+++ + V Sbjct: 25 FKAYIVGGCIRDAILGKVPADWD-VATDAQPEDVKLIFDKIVETGIKHGTVTAVINGCNY 83 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 T ++ S A T++DDL RD TINA+A IIDP+ G+ D++ + Sbjct: 84 EITTFRAPSS--------AKIPTIKDDLGLRDFTINAMAYHPEEGIIDPFLGMQDMEKSV 135 Query: 121 LRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +R V F EDPLR+LR R ++ LGF I L+ ++E + +E ++PER+ Sbjct: 136 IRAVGSPEDRFHEDPLRMLRAVRLSS---TLGFEIDRSVLSAIKE--NCKLIEKVSPERI 190 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 E L + P+ F VLR+ G L+ + PE D F +H + G+HTL T+ Sbjct: 191 RDELSKILISDRPKNFL-VLRETGLLKYVLPEFDICFDTGQNHPYHV-YNVGMHTLETV- 247 Query: 238 MAAMLSPQVDVRFATLCHDLGKGL---TPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + + + +R+ L HD+GK + T +GH V + +++ +RLR N+ Sbjct: 248 --SNIESNLVLRWTMLLHDIGKPVVKTTDQNGTDHFYGHPEESVNIADKIMKRLRFDNKT 305 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT---- 350 + + + HD N K++ K I L EAD +G+ Sbjct: 306 TNKVLRLIKHHD---RRIEPNQKSVRKAVSIIG----KDIFPDLLKVQEADKKGQNPQYL 358 Query: 351 --GFESADYPQGRWLREAWE------VAQSVPTKAVVEAGFKGV-EIREELTRR 395 + D + + E ++ ++ GF+ EI L Sbjct: 359 DERLKVLDEIKDIFFNLEKEGQILNLKDLALNGNDLLAMGFEQSREIGIILREL 412 >UniRef50_C7RG10 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=4 Tax=Anaerococcus RepID=C7RG10_ANAPD Length = 450 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 110/410 (26%), Positives = 176/410 (42%), Gaps = 38/410 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ----QVGRDFPVFLHPQTHE 56 K + VGGAVRD+LL V D D + + P+E+ + +G+ F E Sbjct: 21 FKSFPVGGAVRDSLLSREVSDID-ITTDARPEEIEEVFRDFKLIDIGKRFGTIKVIIEGE 79 Query: 57 EYALARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 + + T RK + G L DDL+RRD TINA+A D GEIIDP+ G D Sbjct: 80 AFEI-TTFRKESAYRDGRHPTEVRFSDNLIDDLERRDFTINAMAFD-QGEIIDPFGGRDD 137 Query: 116 LQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L +++R V A ED LR LR RFA R LGF I + +RE +A ++ + Sbjct: 138 LSMKVIRAVGDARERIDEDLLRSLRAVRFANR---LGFTIEESLKEAIRE--NANKINSI 192 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER+ E LT+ P +++ + G L +FPE+ G + +H + D H+ Sbjct: 193 SQERIASELSEILTSATPSSGIRLMDEVGLLAEIFPEVKRTVGFDQHSSYHSD-DVYNHS 251 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLR 289 L L + + VRF+ L HD+GK T R GH +++ + + L+ Sbjct: 252 LKVLDKS---PADLAVRFSALYHDVGKVYTFFLDERGEGRFFGHQNLSEEMLRKRLKELK 308 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 N+ D A + + H K+I KL + + QL AD+ Sbjct: 309 FSNKFIDDATSLVKRHMDCSN--TYTKKSIRKLLRRLGEG----NLRQLFDLQRADILST 362 Query: 350 TGFESADYPQGRWLREAWEVAQ--------SVPTKAVVEAGF-KGVEIRE 390 ++++ G + ++ ++ G+ +G I + Sbjct: 363 KHPDTSNIDLGEEILTEVLKDNIPKKRSELAIDGNDLISMGYPQGKIIGD 412 >UniRef50_D1CJ19 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CJ19_THET1 Length = 484 Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats. Identities = 109/385 (28%), Positives = 167/385 (43%), Gaps = 37/385 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY-------QQVGRDFPVF--LHP 52 ++Y VGG VRD+LLG V++ D+ + P+E+ VG F + Sbjct: 37 ELYAVGGCVRDSLLGKEVQELDF-ATSAHPEEIKRLLAPLRPDSVYTVGERFGTIGAIFG 95 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYN 111 E R E S ++LE+DL RRD T+NA+A D +G +IDP+ Sbjct: 96 PYRVEITTYRGEWYSPDSRKP---EVTFGISLEEDLSRRDFTVNAIAMDIPSGRLIDPFG 152 Query: 112 GLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G+ DL ++++R V F +DPLR++R RFAA +LGF+I T +R HA + Sbjct: 153 GVEDLHSKVIRAVGDPDARFRDDPLRLMRAVRFAA---NLGFKIEPRTAEAIRR--HAAQ 207 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 + ++ ERV E LT P V L D G ++ + PE+ L V H D Sbjct: 208 ICKISIERVRDELTRMLTGPAPDVAIAALVDLGLMQYIVPEVVELKQVSTGGGKHK--DI 265 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT--PPELWPRHHGHGPAGVKLVEQLCQ 286 IHTL + P + +R+A L HD+ K T + H G K+ E++ Sbjct: 266 FIHTLKVVRNT---PPDLVIRWAALLHDIAKPRTFGIRDGKVHFDHHETIGAKMAEEILS 322 Query: 287 RLRVPNEIRDLARLVAEFHDLIHTFPM--LNPKTIVKLFDSIDAWRKPQRVEQLALTSEA 344 RL + + V H +++ + +L +P L S+A Sbjct: 323 RLHYDRQTIEAVAKVVRMHTQANSYDPEVWTDGAVRRLVREAGDELEP-----LLALSQA 377 Query: 345 DVRG-RTGFESADYPQGRWLREAWE 368 D+ R A + R LRE + Sbjct: 378 DITSYRRQKVEAGVQRVRELRERIQ 402 >UniRef50_UPI0001C37B0D poly A polymerase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37B0D Length = 439 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 96/433 (22%), Positives = 169/433 (39%), Gaps = 48/433 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQVG----RDFPVFLHPQT 54 + Y VGG VRD ++G D D + + P++++ A GY+ + L Sbjct: 18 FEAYTVGGCVRDTIMGRSAHDTD-ITTNALPEQVIAAFDGYKVIPTGLKHGTVTILKNSV 76 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 E R + + T ++ +DL RRD T+NA+A D +G I DP+ G Sbjct: 77 PYEITTYRIDGEYKDSRRPETVEFT--ASITEDLARRDFTMNAIAMDRHGNIADPFGGKE 134 Query: 115 DLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 D++N ++R V F ED LR++R RFAA+ LGF I ++T + M L++ Sbjct: 135 DIENGIIRCVGDPVQRFTEDALRIMRAVRFAAQ---LGFSIEEKTAEAVHSMKE--RLKN 189 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++ ER+ E + L R L + + PE + G + +H D H Sbjct: 190 ISMERIRSELDKILCGRYCVEVL--LEYSDIITTIIPEFEPSIGFDQHSPYH-RYDVWEH 246 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRL 288 T+ + A V +R A L HD+ K HGP G ++ +++ +R+ Sbjct: 247 TVRAVGFAPQ--DNVKMRTALLFHDIAKPACATFDANCRGHFKKHGPVGAEMTKEIMKRM 304 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 + E A ++ H + + + K+ I +L + D Sbjct: 305 KYDGETMTYAVMLIARHSK----KVFDRIAVKKMMADIGD----DLFFELMELKKCDNLA 356 Query: 349 RTGFESADYPQGRWLREAWEVA-----------QSVPTKAVVEAGFKGVEIREELTRRRI 397 + F + L + + +V ++ G KG ++ L Sbjct: 357 KNDFVFEENELFDRLMDEGRLLIENNECRGLRNLAVSGNDLMAIGLKGRDVGAALKEL-- 414 Query: 398 AAVASWKEQRCPK 410 + E++ P Sbjct: 415 --LTLVLEEKLPN 425 >UniRef50_D1AKE0 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AKE0_SEBTE Length = 583 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 90/401 (22%), Positives = 162/401 (40%), Gaps = 25/401 (6%) Query: 4 YLVGGAVRDALLGLPVKDRDW---VVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 Y+VGG+VRD LLG+ KD D+ + + + D +++G+ F + + Y + Sbjct: 23 YIVGGSVRDILLGVSPKDYDFTTNIAYSTLKELFKDYNPKEIGKHFGILMIKINGIHYEI 82 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 A+ + G + +DLKRRD TINA+A +ID YNG D++N+L Sbjct: 83 AKFRKDIGILNGRHPESVKFVDEIAEDLKRRDFTINAMAYSRKNGLIDLYNGSSDIKNKL 142 Query: 121 LRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +R V ED LR+LR RF + LGF + ET + + + +L+ ++ ER+ Sbjct: 143 IRFVGDPGLRIKEDALRILRAVRFVS---ALGFDLETETKKAI--LKNKLQLKKISKERI 197 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 +E L + ++++ G L ++ PEI+ L+ H + D HT+ + Sbjct: 198 REEFSKILLSDYVDKGLLLMKELGILEIIIPEIEMLYEFNQNNPHHHK-DVFAHTVSVVK 256 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + R L HD+GK T ++GH ++ +RL+ PN+ Sbjct: 257 NT---QKDLLTRITALFHDIGKPNTHSIDKNGISHYYGHENNSAEIASAALRRLKFPNDF 313 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEA-----DVRGR 349 ++ H +I F K I K + + + + D Sbjct: 314 IRDVDVLIRNHMII--FEKPGAKAIKKFICKVGIENLDKIFDHFYADMSSKKPPVDYSLI 371 Query: 350 TGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIRE 390 +S + + ++ + +I + Sbjct: 372 DSLKSKVDEIIDKNENIEKQDLEINGNDMLALKIQQKQISK 412 >UniRef50_C6X292 tRNA nucleotidyltransferase n=24 Tax=Bacteroidetes RepID=C6X292_FLAB3 Length = 506 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 113/418 (27%), Positives = 191/418 (45%), Gaps = 51/418 (12%) Query: 3 IYLVGGAVRDALLGLP-VKDRDWVVVG-------STPQEMLDAGYQQVGRDFPV--FLHP 52 Y+VGG VRD L+ D D+V G + E+ V +++ F H Sbjct: 62 AYIVGGYVRDLLMKRGVPSDIDFVTEGSGIDLAQALANEINPRWKVSVFKNYGTAMFKHN 121 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIID 108 E+ AR E + A TLEDD KRRD T+NALA N GE+ID Sbjct: 122 GLDLEFVGARKESYAEDSRNP----AVEAGTLEDDQKRRDFTVNALAISLNKENFGELID 177 Query: 109 PYNGLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 P+ G+ DL+N+++R S + +DPLR+LR RFA+ L F+I + +LA ++ T Sbjct: 178 PFGGISDLKNKIIRTPLEPSQTYSDDPLRMLRAIRFAS---TLRFKIEENSLAAIK--TE 232 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 A ++ ++ ER+ E + + P ++L G ++++ PE+ AL G+ + Sbjct: 233 AERIKIVSRERIMVEFNKIMLSEKPSAGLKILEQTGLMQIILPELTALRGIE-EVEGQTH 291 Query: 226 IDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWP---RHHGHGPAGVKLVE 282 D HTL + + + + +R+A L HD+GK T + HGH G K+V+ Sbjct: 292 KDNFWHTLEVVDNISKNTDSLWLRWAALLHDVGKAPTKKFVEGTGWTFHGHEFLGSKMVK 351 Query: 283 QLCQRLRVP-----NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQ 337 + QRL++P ++ L +L + LI + + +L + + +E Sbjct: 352 TIFQRLKLPLGPDMKYVQKLVKLSSRPIALI--DDGTSDSALRRLL-----FDAGEDLED 404 Query: 338 LALTSEADVRGRTGFESADYPQ-----GRWLREAWEVAQSVPTKAVVEAGFKGVEIRE 390 L + ++AD+ + F+ + + ++E E Q + + G EI E Sbjct: 405 LFILNKADITTKNSFKQEKFKRNFETVALKIKEVEEKDQVRNFQPPI----TGEEIME 458 >UniRef50_D1N4S4 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4S4_9BACT Length = 447 Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats. Identities = 126/408 (30%), Positives = 179/408 (43%), Gaps = 37/408 (9%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFL--HPQTHEEYAL 60 LVGG+VRD LLG D D V + P+E+ L A ++ VG F V L E A Sbjct: 34 LVGGSVRDLLLGKVPSDFDL-VTSAKPEELAQLFADFRAVGASFGVSLIGVGGVSLEVAT 92 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQNR 119 AR ER G D LE D++RRD TINAL D GE+ D G+ DL+ Sbjct: 93 AREERNYLDGRHPELVRYTAD--LECDVQRRDFTINALWYDPAEGEVCDCVGGIDDLERG 150 Query: 120 LLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 ++R V A F ED LR+LR RFAAR L F + ET ++ + A + L ER Sbjct: 151 VVRTVGDAGRRFNEDYLRMLRAVRFAAR---LRFELFPETRRAIQAL--APKAAGLAGER 205 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + E LT +P ++L D G L + PE+ AL GV P ++HPE D HTL+ L Sbjct: 206 INAEVTRMLTGPDPARAVRMLFDTGLLAAVLPEVAALDGVEQPPEFHPEGDVLTHTLLML 265 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 S A ++ ++ L HD+ K + R + H G +L ++ RL + Sbjct: 266 SHMA--CADANLAWSVLLHDISKPEARTVGEDGRARFYAHESMGAELAGKILDRLHFSSA 323 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFD--SIDAWRKPQRVEQL----ALTSEADVR 347 RD H + + + KL + + R++ + + + Sbjct: 324 DRDSITQAVRNHMRFASVRDMRAAKLRKLIADPNFPLELELHRLDCISCHGLMECFVFLL 383 Query: 348 GRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTR 394 R E P+ R L E W V + +V AG K G + L Sbjct: 384 DRLAAE----PEHRRLPEPW-----VRGRDLVAAGVKPGPRFKTVLEE 422 >UniRef50_D1Y2S7 Multifunctional CCA protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2S7_9BACT Length = 414 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 136/332 (40%), Positives = 184/332 (55%), Gaps = 11/332 (3%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG-YQQVGRDFPVFLHPQTHE--EY 58 ++Y+VGG VRD L+G P +DRD+VV G + + VGR FPV+L E Sbjct: 16 QLYVVGGWVRDRLIGRPAEDRDYVVCGLDAATLEREFQVRAVGRQFPVYLLEVGGRLSEV 75 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQ 117 ALARTERK+G+GY GF +PD T+E+DL RRD +N++A GE+IDP+ G D++ Sbjct: 76 ALARTERKTGTGYRGFEARFSPDTTIEEDLYRRDTRMNSMAVRLPGGELIDPFGGRADIE 135 Query: 118 NRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R++ S F +DP+R R A + A LGF IA T+ LM LE ERV Sbjct: 136 RRVISATSEHFRDDPVR---ALRAARQAAQLGFSIAPGTVRLMSACREELALE--PTERV 190 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 + E AL + P++FF LRD G L +FPE+ AL GV PAK+H +D H+L L Sbjct: 191 FAEMRKALASPRPELFFIALRDAGILDAVFPELTALDGVEQPAKYHRGLDAFEHSLEVLR 250 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 A L+P+ RFA L HDLGKGLTP + WP H GH G+ +E+L +R+ +P Sbjct: 251 RTAALTPRAATRFAALVHDLGKGLTPRQEWPHHIGHEERGLAALERLDRRMTLPRPWYHF 310 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAW 329 AR V H + P IV + + Sbjct: 311 ARFVIANHMRLPRLR--RPGAIVAVIGEMRHG 340 >UniRef50_C0EC94 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC94_9CLOT Length = 449 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 101/403 (25%), Positives = 164/403 (40%), Gaps = 37/403 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEML--DAGYQQVGRDFPVFLHPQTHEEYA 59 + Y+VGG VRD LLG D D + + P E + AGY + + Sbjct: 22 EAYIVGGCVRDLLLGWEPDDYD-ITTSALPFETMRCFAGYHIIETGVKHGTVTAVIDGMP 80 Query: 60 LARTERKSGSGYTG--FTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 L T + Y+ +L +DL RRD TINA+A + + D + G DL+ Sbjct: 81 LEITTYRIDGQYSDNRRPDSVTFTRSLREDLARRDFTINAMAYSPSNGLQDYFGGQQDLK 140 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++++R V F ED LR+LR RF++ LGF + T A + +T G L H+ Sbjct: 141 DQMIRCVGDPQTRFEEDALRILRAVRFSS---VLGFGMEPTTAAAL--LTRRGLLVHIAR 195 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ERV E L R+ + L + PEI G +++H D HT+ Sbjct: 196 ERVQVELNKLLLGRDVGRVLR--EYTEVLCEVIPEIIPCIGFEQHSRYH-LYDVWEHTVH 252 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLT--PPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 T+ + ++ VR A L HDL K LT + H L +++ +RLR Sbjct: 253 TVERS---PERLTVRLAMLLHDLAKPLTFSIEGGTGHFYSHQQKSADLAQEILKRLRYSG 309 Query: 293 EIRDLARLVAEFHDL-IHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 EI + +H + H + K I + + + L +D+ G+ Sbjct: 310 EITRRVVNLIRYHSVEFHG----SAKAIKRWLGKLGEEELREL----LLVQRSDLLGK-- 359 Query: 352 FESADYPQGRWLREAWEVAQSVPTK----AVVEAGFKGVEIRE 390 + + + + L E + + + V + G ++RE Sbjct: 360 -DPSFWYELEELDENEQRINEIIAQNQCFTVAQLAVNGNDLRE 401 >UniRef50_A9KL25 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KL25_CLOPH Length = 459 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 98/412 (23%), Positives = 163/412 (39%), Gaps = 34/412 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 + Y VGG VRD+LLG D D + + P E+ + + G E + Sbjct: 21 FEGYAVGGCVRDSLLGRIPGDWD-ITTSANPCEVKQIFSRTIDTGIKHGTVTVMLGKEGF 79 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + L +DLKRRD TINA+A + ++D + GL DLQ+ Sbjct: 80 EVTTYRLDGEYEDNRHPKQVEYTKNLIEDLKRRDFTINAMAYNAKDGLVDEFEGLKDLQD 139 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 + +R V F ED LR+LR RF+A+ L F I DETLA +R A L++++ E Sbjct: 140 KKIRCVGSADQRFDEDALRILRAVRFSAQ---LNFTIEDETLAAIR--LKALNLKNISAE 194 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ +E L + +P+ + + G V+ PE D + + G HTL Sbjct: 195 RIREELNKLLLSSHPKKIM-IAYETGLTEVILPEFDQMLATKLQGPYQQS-SVGEHTLEA 252 Query: 236 LS-MAAMLSPQVDVR-------FATLCHDLGKGLTPPELWPR-HHGHGPAGVKLVEQLCQ 286 L LS V+ + +A L HD+ K + + H G + + + + Sbjct: 253 LRYFTKNLSKDVEDKKQQLIYCWAILLHDVAKPVIKDNNPQVLNQEHQTKGANIAKSILR 312 Query: 287 RLRVPNEIRDLARLVAEFHDL--------IHTFPMLNPKTIVKLFDSIDAWRKPQRVEQL 338 RL+ NE + + +H+ I + + + + + Q+ Sbjct: 313 RLKFDNETIESVTKLVYYHNFTFGHSKEDIRRATNQIGEKYMPMLFVLQECNMQTKDSQV 372 Query: 339 ALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGF-KGVEIR 389 E D++ G + + +V K +++ GF G I Sbjct: 373 IEEMEKDLKRAKELYQDMIEHGECVSL---KSLAVNGKDLMDQGFESGKNIG 421 >UniRef50_C6NV27 tRNA nucleotidyltransferase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NV27_9GAMM Length = 407 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 152/414 (36%), Positives = 210/414 (50%), Gaps = 33/414 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM---LDAGYQQVGRDFPVFLHPQTHEE 57 MK YLVGGAVRD L G+ V+DRD+V+VG+ +++ L G++ G+DFPV + + EE Sbjct: 1 MKRYLVGGAVRDRLRGVTVQDRDYVLVGAGQEDIDALLARGFRWAGKDFPVLI-GREGEE 59 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 YALARTERK+GSG+ GF A V+LEDDL RRDLTINA+A+D + G I+DPY G DL Sbjct: 60 YALARTERKTGSGHRGFVVATA-GVSLEDDLLRRDLTINAMAEDLETGAIVDPYGGRRDL 118 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 R+LRHVSPAF EDPLRVLR+ARFAAR F IA ET AL+R+M AGEL L+P+R Sbjct: 119 DARVLRHVSPAFREDPLRVLRLARFAARLP--DFVIAPETEALVRQMIAAGELAELSPDR 176 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 VWKETE AL +F +L L VLFPE+ L P L L Sbjct: 177 VWKETEKALKGPAASRYFSLLWYWSGLAVLFPELLPLAQSGLP---------WQRGLAAL 227 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 Q + +A C+ P + AG + + +RL +P + Sbjct: 228 DHCLHRYGQPALAWAAFCY------------PMSSRYPAAGEGALMAMGRRLPIPKSWQR 275 Query: 297 LARLVAEFHD-LIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 L L+ +P+ ++L + A R + + +A E Sbjct: 276 LTLAAVTGRTQLLPALRQASPRPWLRLLLQMGALRDGGVLGSVLQVWQAIAEVELVAERE 335 Query: 356 DYPQGRWLREAWEVAQSVPTKAV---VEAGFKGVEIREELTRRRIAAVASWKEQ 406 REA + ++P + + + G + L + +A+ + Q Sbjct: 336 WALALATTREAQQQLLALPQSSAYQRLGEAYAGRDFGRALRILQWRTLAAMQRQ 389 >UniRef50_C7MMX1 Uncharacterized domain HDIG-containing protein n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMX1_CRYCD Length = 451 Score = 274 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 102/427 (23%), Positives = 160/427 (37%), Gaps = 48/427 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG---------RDFPVFLH 51 ++ +LVGG VRD L+G P+ D D + ++ QE + Q G + Sbjct: 22 VEAWLVGGCVRDGLIGRPIHDID-IASSASWQETVRL-CQAAGMTTVETGTQHGTVTIIA 79 Query: 52 PQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYN 111 T E R E + G Y P ++++DL RRD TINA+A + + + DPY Sbjct: 80 DGTPFEVTTFRGEGQYQDGRHPE--YVFPVDSIDEDLARRDFTINAMAWNPSRGLHDPYG 137 Query: 112 GLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G D +++R V A F ED LR+LR ARFA++ LGF + ET M E H Sbjct: 138 GQADAAAKIIRAVGKAQQRFDEDALRILRGARFASQ---LGFTLETETAHAMNEAAH--N 192 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 L ++ ER+ E ++ L + + PE+ G +K+H D Sbjct: 193 LARISAERIAAEMDALLKGSFVHDAL--MNCAPVICAAIPELSCTCGFDQQSKYH-SFDV 249 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLC 285 H + VR+ HD+GK T H G + L Sbjct: 250 YEHLAWATQQT---PKKSLVRWCAFLHDIGKPATMVVDEAGAGHFPDHAAVGEAMARNLL 306 Query: 286 QRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEAD 345 +RLR P A L+ +HD+ P+ ++ +D + L AD Sbjct: 307 KRLRFPTRFIHDACLLIRYHDI---PIAPTPRATKRMLQRLDG--REDLFRDLCALKRAD 361 Query: 346 VRGRTGFESADYPQGRWLREAWEV-----------AQSVPTKAVVEAGF-KGVEIREELT 393 + + A ++ V++ G G + + L Sbjct: 362 SLAHAPQWRGGTKAADAAEKCLDAIIEQNAAFSRSALAINGNDVIKLGVPAGPAVGKALD 421 Query: 394 RRRIAAV 400 + AV Sbjct: 422 AA-LNAV 427 >UniRef50_A4T0E4 Polynucleotide adenylyltransferase region n=2 Tax=Polynucleobacter necessarius RepID=A4T0E4_POLSQ Length = 376 Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats. Identities = 148/388 (38%), Positives = 207/388 (53%), Gaps = 51/388 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIY VGGA+RD L+ LPV D D+VVVGS+ +EM+ G++ VG+DFPVFLHP T EYAL Sbjct: 1 MKIYAVGGAIRDTLMSLPVHDIDYVVVGSSVEEMVAKGFRPVGKDFPVFLHPDTQAEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN------GEIIDPYNGLG 114 ARTERK+G GY GF YA P VTLE DL+RRDLTINA+AQ+ G I+DPYNG Sbjct: 61 ARTERKTGKGYKGFHFYADPSVTLEQDLERRDLTINAMAQEVGLDGTWIGPILDPYNGQE 120 Query: 115 DLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 DL ++ RHVS AF EDPLR+LR+ARFAAR+ F +ADET+ ++ + +GEL L+ Sbjct: 121 DLAAKVFRHVSDAFAEDPLRLLRIARFAARFPE--FSVADETMIALKAIVQSGELAALSA 178 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+W+E +T P FQVL + GA + P L A + E+ Sbjct: 179 ERIWQELARGMTAAKPMHMFQVLLNTGAAKTFLP--ATLTNQLAQEVFREEL-------- 228 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 +S ++ ++ R A L + +R+P E+ Sbjct: 229 -ISHYELVGNYLEERCAVTLMRL-------------------PSSEIRSWADCVRMPTEV 268 Query: 295 RDLARLVAEFHDLIHTFPM--LNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 RD + + +E + LI ++ F+ D WRKP R + L +E + G Sbjct: 269 RDFSEIFSELNTLILKTTEGKFQAVDVLAWFNRADVWRKPDRGQALLRLAE-----QLGL 323 Query: 353 ESADYPQGRWLREAWEVAQSVPTKAVVE 380 + L ++ AQ++ T ++ Sbjct: 324 PVST------LIQSMRNAQAINTAEIIA 345 >UniRef50_Q7U391 CCA-adding enzyme n=5 Tax=Bordetella RepID=CCA_BORBR Length = 364 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 160/401 (39%), Positives = 209/401 (52%), Gaps = 52/401 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +++Y+VGGAVRD LLGLP DRDWVVVG+TP++M G+ VG DFPVFLHP+T EEYAL Sbjct: 12 LQVYIVGGAVRDGLLGLPAGDRDWVVVGATPEDMARRGFIPVGGDFPVFLHPRTKEEYAL 71 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GY GFT Y DVTLE DL+RRDLT+NA+A+ GE++DP +G+ D++ R+ Sbjct: 72 ARTERKSGRGYKGFTFYTGADVTLEQDLQRRDLTVNAIARTPQGELVDPLDGVADVRARV 131 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHV AF EDP+R+LR+ RFAAR+ F IA ET+ L R M AGE + L PERVWKE Sbjct: 132 LRHVGEAFAEDPVRILRLGRFAARFG--DFSIAPETMQLCRRMVEAGEADALVPERVWKE 189 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 L + P VL GAL + PE+ V A + AA Sbjct: 190 VSRGLMAQAPSRMLDVLARAGALARVMPELHDDAAVRA----------------EIDRAA 233 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + R+A LC TP + L +RLR P E D ARL Sbjct: 234 AAGLPLAGRYALLCRH-----TPER----------------DALGRRLRAPVECMDQARL 272 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + D P + L + DA RKP+R + L + A Sbjct: 273 LPLAVDA--LAASATPAAQLDLIERCDALRKPERFDALLQAAA---------IVAPVDLS 321 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVE-IREELTRRRIAAV 400 W R + +++ A+ I+ L + R+ A+ Sbjct: 322 AW-RARVQAVRAIDAGAIARQCAGDPARIKPALRQARLQAL 361 >UniRef50_B4CZL9 tRNA adenylyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL9_9BACT Length = 447 Score = 273 bits (699), Expect = 7e-72, Method: Composition-based stats. Identities = 97/427 (22%), Positives = 162/427 (37%), Gaps = 40/427 (9%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYAL 60 Y GG VRD L+G+ D D + + P+++ + + + G F V + Q E+ + Sbjct: 25 AYYAGGCVRDQLMGVEPHDYD-IATNAHPEQVQNLFRRTIAVGAHFGVIIVLQDDFEFQV 83 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQNR 119 A T R G G + T E+D RRD TIN L D G++ID G DL + Sbjct: 84 A-TFRNDGQYIDGRRPESVSFATPEEDATRRDFTINGLFFDPIAGKLIDYVGGQQDLAKK 142 Query: 120 LLRHVSPAFGEDPLRVLR-----------VARFAARYAHLGFRIADETLALMREMTHAGE 168 +LR + + RF A L F + T + E +A Sbjct: 143 MLRAIGNPYD--------RLREDRLRLLRAVRFGA---TLCFDLDGATWRAVCE--NARH 189 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 + ++ ER+ +E + F +L + G + + PEI+AL G P ++HPE D Sbjct: 190 IHEVSAERIREELVKIFLSPKRVRGFDLLDESGLMAAVLPEIEALKGCEQPPQFHPEGDV 249 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLC 285 +HT + L + V + + L HD+GK T P+ R GH G ++ E L Sbjct: 250 FVHTRIMLGLLPTQ-VSVPLVLSVLFHDIGKPGTYAVDPDGRIRFSGHDKLGAEMTEALM 308 Query: 286 QRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEAD 345 RLR D H + + + + + +E + + Sbjct: 309 SRLRFSRAEIDATVEAVANHMVFKDVQQMRVAKLKRFLARPHMEDE---LELHRVDCTSS 365 Query: 346 VRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK----GVEIREELTRRRIAAVA 401 +E + + E + + ++ G K EI E + R++ Sbjct: 366 HGMLDNYEYLKAKREEFANEPLIPPPLITGRELIALGLKPGPRFAEILEAVQSRQLEGTL 425 Query: 402 SWKEQRC 408 E+ Sbjct: 426 KTSEEAL 432 >UniRef50_A8REM2 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8REM2_9FIRM Length = 447 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 99/416 (23%), Positives = 174/416 (41%), Gaps = 39/416 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT----HEE 57 + ++VGG VRDA+ D D V+ + PQE + Q P T ++E Sbjct: 20 EAFVVGGCVRDAICKRNCHDYD-VITNALPQETIALFQQIGLHILPTGFAHGTLTLIYQE 78 Query: 58 YALARTERKSGSGYTGFTCYAA--PDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 + + T + Y A ++ +DLKRRD TINA+A +IDP+ G+ D Sbjct: 79 HFIEITTYRKEDDYIDHRRPANISFTKSIYEDLKRRDFTINAIAYHPVHGLIDPFCGIKD 138 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 + R +R V ED LR+LR RF+A+ L F I ++T + +THA +++++ Sbjct: 139 IHRRTIRCVGDPNKRMEEDALRILRALRFSAQ---LSFTIEEKTWQAI--LTHAMDIDYV 193 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER+ E L + P LR L ++ PE+ ++ P P WH D HT Sbjct: 194 SKERIQAEFNQYLCSDKP-NALHFLRAANVLELILPEMQRIYDAPQPTPWHA-YDIFTHT 251 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLR 289 + L+ + + ++ + A + HDLGK L + +HGH ++ +Q ++L Sbjct: 252 DIALNHSKGYN--LEKKLAIVFHDLGKPLCESFDEKGIVHYHGHAEISKEIAKQRLKQLH 309 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 N + FHD + K + + +D + + AD + Sbjct: 310 YSNTAIKYITTLIAFHDY---YVCPKRKVLRRFLSKLD--NDIELALDILDIQLADNHAK 364 Query: 350 TGFESADYPQGRWLREAW------------EVAQSVPTKAVVEAGFKGVEIREELT 393 + + +A +V ++ G++G +I++ L Sbjct: 365 HPKLQKELIENILASKALLLQMQKEQDMIQRKDLAVNGHDIIALGYQGADIKKALE 420 >UniRef50_B0N1P8 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N1P8_9FIRM Length = 451 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 112/404 (27%), Positives = 185/404 (45%), Gaps = 26/404 (6%) Query: 2 KIYLVGGAVRDALL--GLPVKDRDWVVVGSTPQEMLDA-----GYQQVGRDFPVF-LHPQ 53 + +LVGG VRD L+ + D D V G + E+ + +G+ F + L Sbjct: 24 RAFLVGGIVRDMLIYNRVDYHDVDVEVYGLSVDELEELLANYGNVNSIGKSFGILKLDVL 83 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNG 112 + ++AL RTE K+G + F ++ L+ RRDLTINAL + G+I D ++G Sbjct: 84 PNFDFALPRTEIKTGESHQDFDVTVNQNLDLKVAASRRDLTINALMYEIKTGKIYDFFHG 143 Query: 113 LGDLQNRLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 D++ R LR VS F EDPLRVLR A+FA+R L F I T + ++M L+ Sbjct: 144 QEDIEKRTLRMVSETTFIEDPLRVLRTAQFASR---LDFCIETATKLMCKKMVQNKSLDK 200 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 L+ ERV++E L ++ P + L++ ++ L+P +D L +HPE D H Sbjct: 201 LSKERVFQEYSKLLLSQQPSIGLTFLKE---IKALWPCLDVLSKTMQRLDYHPEGDVWRH 257 Query: 232 TLMTLSMAAML----SPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQR 287 TL+ +AA+ S + ++ L HD+GK T GH AGVK+ Q + Sbjct: 258 TLLVTDLAALCCHKTSNPLGFMWSALLHDIGKA-TVTTKDGHAPGHNEAGVKIFNQEVKA 316 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPK--TIVKLFDSIDAWRKPQRVEQLALTSEAD 345 +++ + + +H + K + K+ ID +E L L ++ D Sbjct: 317 FIPDKQLQKYIKTMIFYHMHLMNMVRNEAKDYSYFKILKGIDGI---VTIEDLILITKCD 373 Query: 346 VRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIR 389 GR E + + ++ + S + + G+ + Sbjct: 374 KLGRYKDEHENINRFDYVMKEKMARLSTKAQLPLVDGYDLKALG 417 >UniRef50_B0MLX5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLX5_9FIRM Length = 438 Score = 271 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 103/413 (24%), Positives = 167/413 (40%), Gaps = 42/413 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG------YQQVGRDFPVFLHPQTH 55 + Y VGG VRD LLG +D D V + P+++++ + + + Sbjct: 20 EAYCVGGCVRDYLLGQCPEDYD-VTTSALPEQIIEVFDGYRLLTVGLKHGTVTVIINKHP 78 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 E R + + P+ L DDL RRDLTINA+A +D ++D Y G D Sbjct: 79 VEITTYRIDGEYIDHRHPSKVGFTPN--LADDLARRDLTINAIAYNDKVGMVDLYGGAED 136 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L+N ++R V F ED LR+LR RFA+RY GF I T + L + Sbjct: 137 LKNGIIRCVGDPMKRFDEDGLRILRALRFASRY---GFSIDKATSDAIHR--QKFLLSFI 191 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDC-GALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 + ER+ E LT + +LR+ + + PE+ G +K+H + H Sbjct: 192 SAERINSELCGILTGDC----YDILRNYSDVICEIIPEMYPCIGFEQHSKYHNKT-VYGH 246 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLT--PPELWPRHHGHGPAGVKLVEQLCQRLR 289 + T++ A P V+ R L HD+GK + + +GH K+ E++ +RLR Sbjct: 247 IVATVAAA---EPTVEARLTMLLHDIGKPDSFFMKDGAGHFYGHADVSCKIAEKILERLR 303 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLN---------PKTIVKLFDSIDAWRKPQRVEQLAL 340 N+I+D + E H ++ + + + +KL + Sbjct: 304 FSNKIKDEVLFLIENHGIVINDDIRSIRRGVARYGAERFLKLIKVHYYDTCGKSPAYFGE 363 Query: 341 TSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELT 393 + D + E L++ V + GF G EI + L Sbjct: 364 KALFDSIEKHTREFLQNEPPMSLKQL-----KVNGSDISRLGFTGKEIGKALN 411 >UniRef50_A9F087 Cca protein n=2 Tax=Myxococcales RepID=A9F087_SORC5 Length = 460 Score = 271 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 107/402 (26%), Positives = 157/402 (39%), Gaps = 29/402 (7%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHEEYA 59 ++VGG VRD L G KD D V + P+E++ A + + L E Sbjct: 30 WIVGGCVRDLLRGQDAKDWD-VATDARPEEVVAAFRKVIPTGIQHGTVTVLVRGVPYEVT 88 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQN 118 R + G D+T DL RRD T+NA+A D +G +IDP+ G DL+ Sbjct: 89 TLRGDGTYSDGRRPDRVEFVDDITA--DLARRDFTMNAIAIDPVDGHLIDPFGGRSDLEA 146 Query: 119 RLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +++R V F ED LRVLR ARFAA L + ET M ++ E Sbjct: 147 KIIRAVGDPGERFAEDGLRVLRAARFAA---TLEGTLDPETERAMGTARSHQTFRCVSAE 203 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 RV E A+ R P V F+++R L + PE+ G +WH D H + Sbjct: 204 RVRDEWLKAMRARRPSVAFEIMRRTELLAITCPEMIESVGCEQN-RWHA-YDVWGHAMAC 261 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLT----PPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 L P+ +R A L HD+GK T + H G ++ + + RLR Sbjct: 262 LDACK---PEPILRVAALMHDIGKPRTREFSEKTKDYTFYEHERVGAEMADPILTRLRFS 318 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 N+ R + H LI + + + P L AD G+ Sbjct: 319 NDERARIVALIRHH-LICYDDTWTDAAVRRWLRRV----TPALAPDLYEIGVADALGKGR 373 Query: 352 FESADYPQGRWLREAWEVAQSVPTKAVVEA-GFKGVEIREEL 392 + D LRE + + + G + +EL Sbjct: 374 EATEDIATIGRLRERVDALLAAGAALSAKDLAVNGNRLMKEL 415 >UniRef50_B1CAN8 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAN8_9FIRM Length = 439 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 95/418 (22%), Positives = 163/418 (38%), Gaps = 53/418 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ------VGRDFPVFLHPQTH 55 + Y+VGG VRD LLG KD D + ++P+E ++ + + + T Sbjct: 22 EAYIVGGCVRDLLLGKTPKDYD-ITTNASPKETMELFKEYKTIPTGIKYGTVTVIINNTP 80 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 E R E K + ++E+DL RRD TINA+A ++ +ID + G D Sbjct: 81 IEVTTFRKEGKYIKNRKPESVEFL--SSIEEDLSRRDFTINAMAYNEKSGLIDLFEGRQD 138 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L+ ++R V F ED +R+LR RF RY F I + TL ++E H L ++ Sbjct: 139 LEKGIIRVVGDGKERFKEDAIRILRAYRFMGRY---DFEIENNTLNAIKENMH--LLNNV 193 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ER+ E + + + + VLFP I F K+H + + G HT Sbjct: 194 AKERILPEIKEIFESDMD------INKMDFITVLFPIIKECFHTYQNNKYHMQ-NVGEHT 246 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLCQRLR 289 T + + ++ L HD+GK T E + H ++ + + + Sbjct: 247 YKTFNNIENV---FHLKMTMLLHDIGKVKTKTTDAENTDHFYNHSDISREMAKNILDDFK 303 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 N+ ++ L+ + HD + K + + + + L AD + Sbjct: 304 FDNDTKEKILLLIKNHD---KYMAPKNKYVKEKLNEFGE----ELFFDLIKVRIADDEAK 356 Query: 350 TGFESADYPQGRWLREAWEVAQ--------------SVPTKAVVEAGFKGVEIREELT 393 D + R+ E A+ + ++ GF G ++ E L Sbjct: 357 NHELVKDNLKR--FRDTEEFAKRVIKNKEPYRISDLKINGDYIISLGFTGKDVGEILK 412 >UniRef50_D1BP90 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=3 Tax=Veillonella RepID=D1BP90_VEIPT Length = 472 Score = 270 bits (690), Expect = 7e-71, Method: Composition-based stats. Identities = 109/437 (24%), Positives = 168/437 (38%), Gaps = 59/437 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ-------VGRDFPVFLHPQT 54 + Y++GGAVRD L+ D D +V + P +++ VG+ F V + Sbjct: 18 EAYIIGGAVRDILMHQKPHDFD-IVTSARPDTVIEVLRSHDIQTTDLVGKSFGVVVATLE 76 Query: 55 HEEYALA--RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 ++Y +A RTER + A TLE+D+ RRD T+N +A + GE+ID G Sbjct: 77 GKQYEIATYRTERYGADSHRPEEITYAD--TLEEDVLRRDFTVNGMAMNRYGEVIDLVGG 134 Query: 113 LGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 D++++ LR + F ED LR+ R RF A+ L F + E L M + H + Sbjct: 135 RRDIKHKTLRTIGNAQERFEEDALRLFRACRFVAK---LDFLPSKELLEAMPKAFH--RV 189 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALR--------------VLFPEIDALFG 215 L+ ERV E + VL + PE+ L Sbjct: 190 PGLSLERVRSEINRLMLEPAVAKGLDVLVQSRLAECSCRVVENGVAREVPILPELYHLVN 249 Query: 216 VPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPP----ELWPRHH 271 +P +H E D HTL +S P + +R+ L HD+ KG+ Sbjct: 250 LPQEKDFH-EFDGWYHTLAVVSHT---EPDLVLRWGALLHDVAKGMPAVRAVINGRLTDR 305 Query: 272 GHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFD---SIDA 328 GH G ++ E L RL P + + H H F K Sbjct: 306 GHDTLGAEMTETLLTRLGYPKAFVQRVAWIVKNHMRFHYFVQNGDANEKKWLRKEARSGE 365 Query: 329 WRKPQRV----EQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKA------- 377 +R Q + EQLA ADV G S+ + +++ +P Sbjct: 366 FRDSQIMRTAWEQLAKVCAADVLGCGKPYSSTDGTLAFGECMADLSLEMPVHTKDLNYDE 425 Query: 378 -VVEAGFKGVEIREELT 393 V++ G ++ E L Sbjct: 426 RVIK--LAGKQVGEGLQ 440 >UniRef50_B6BWF7 CCA-adding enzyme n=1 Tax=beta proteobacterium KB13 RepID=B6BWF7_9PROT Length = 365 Score = 270 bits (690), Expect = 9e-71, Method: Composition-based stats. Identities = 130/410 (31%), Positives = 209/410 (50%), Gaps = 53/410 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIYLVGGAVRD +L P ++D+VVVGSTP+EM++ ++ VG+ FPVFLHP THEEYAL Sbjct: 1 MKIYLVGGAVRDEILNQPYTEKDYVVVGSTPEEMIEKKFKPVGKSFPVFLHPDTHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE+K+G GY F Y +P ++LE+DL RRDLTINA+A+DD + IDP+NG+ D+ ++ Sbjct: 61 ARTEKKNGVGYKDFIFYTSPTISLEEDLVRRDLTINAIAKDDQNKYIDPFNGINDISKKI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLR+LR+ARF A+ F+IA+ETL L++ M + GEL++L+ +R+ E Sbjct: 121 LRHVSDAFKEDPLRILRLARFKAKLP--DFKIAEETLVLLKTMINEGELKYLSYDRIIIE 178 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFP-----EIDALFGVPAPAKWHPEIDTGIHTLMT 235 + + +FF+ L D GA+ +F ++ F + + Sbjct: 179 IKKVFQLKEGHIFFKTLEDIGAIDQIFENNNKRKLSECFQSFFKHGHYFKNFNLCWLFFQ 238 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 S Q V F+ D+ K +L++ L Sbjct: 239 EKFNFKFSKQYSVNFSKKDLDINKTF----------------KELIKDLL---------- 272 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR-GRTGFES 354 F L+ + + + + + K +++++ D+ + Sbjct: 273 --------------NFRNLSSADQLFVLNRVGFFSKDDKLDKILELIRLDLLIDQNDLNI 318 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWK 404 + L ++ + + + G +I E + ++R+ + S++ Sbjct: 319 SLLTYHDKLENFFK-----NKQINIPSNLTGKDIAEHIKKQRLNFLESFQ 363 >UniRef50_A0M3Q3 TRNA nucleotidyltransferase n=19 Tax=Bacteroidetes RepID=A0M3Q3_GRAFK Length = 477 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 109/415 (26%), Positives = 176/415 (42%), Gaps = 41/415 (9%) Query: 3 IYLVGGAVRDALLGL-PVKDRDWVVVGSTPQEMLDAGYQ-------QVGRDFPVFLHPQT 54 Y++GG VRD +L KD D V VGS + + QV ++F + Sbjct: 30 AYVIGGFVRDHILERGEPKDIDIVAVGSGIELAKKVSEKLPNKPKVQVFKNFGTAMLRSE 89 Query: 55 H--EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ----DDNGEIID 108 E+ AR E D TLEDD RRD TINALA D G+++D Sbjct: 90 DMEIEFVGARKESYRKDSRKPIV----EDGTLEDDQNRRDFTINALALKLNKDGFGDLLD 145 Query: 109 PYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 P+NG DL+ ++++ + +DPLR+ R RFA++ L F I E+L ++ + Sbjct: 146 PFNGYDDLKKKIIKTPLDPDITYSDDPLRMYRAIRFASQ---LNFMIEAESLKAIK--AN 200 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 ++ ++ ER+ E + + P F +L G L+ + PE+ AL G+ + Sbjct: 201 NERIKIISKERIVDELNKIMLSDKPSKGFALLYKTGLLKKIIPELTALAGID-EVEGQTH 259 Query: 226 IDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVE 282 D HTL + + + + +R+A L HD+GK T ++ HGH G K+V Sbjct: 260 KDNFWHTLEVVDNISENTDDLWLRWAALLHDIGKAPTKKFHKKIGWTFHGHEFVGAKMVY 319 Query: 283 QLCQRLRVP-NEIRDLARLVAEFHDL--IHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLA 339 +L +RLR+P NE + + + + +L + +E L Sbjct: 320 KLFKRLRLPLNEKMKFVQKMVLMSSRPIAIADDHVTDSAVRRLI-----FDAGDNIEDLM 374 Query: 340 LTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTR 394 EAD+ + Y L + Q V + V F+ EE+ + Sbjct: 375 TLCEADITTKNPKRFKKYHNNFKLVR--QKIQEVEERDHVR-NFQPPVSGEEIMQ 426 >UniRef50_D2RM72 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RM72_ACIFE Length = 481 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 110/424 (25%), Positives = 166/424 (39%), Gaps = 48/424 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG-------YQQVGRDFPVFL-HP 52 + ++VGGAVRD LLG D D VV + P+E++ ++G++F V + Sbjct: 21 FQAHVVGGAVRDMLLGRTPDDYD-VVTNARPEEIIRTAEDAGIPVVSELGQNFGVVILRV 79 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 + H A GSG TLE+DL RRD TINALA D G I D ++G Sbjct: 80 ERHGVEVAAYRNETYGSGDAHRPSEVWYCKTLEEDLSRRDFTINALAVDQEGHITDCFHG 139 Query: 113 LGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 L DL+ R+LR V F ED LR+ R RF + LGF L + + ++ Sbjct: 140 LDDLRGRVLRTVGDPDRRFSEDALRMFRACRFVGQ---LGFAPDPAILPAIGR--NLQKV 194 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALR--------------VLFPEIDALFG 215 L+ ERV E L ++ G + PE+ L G Sbjct: 195 PGLSLERVRTELNKLLMGTYAGEGMDLMVKSGLAAESCRVRRKGQYETVPILPELTHLVG 254 Query: 216 VPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT-----PPELWPRH 270 + ++HP D HT + L ++V + L HD+ KGL E P Sbjct: 255 LGQNPQFHP-YDVWKHTAVALDKGDR---SLEVGWGILLHDVAKGLEGVRGINREGQPCD 310 Query: 271 HGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFD---SID 327 HGH G L Q+ +RL++P E+ D + + H Sbjct: 311 HGHEAVGAALARQILERLQLPREVVDRVAWLVKNHMHFGFISAQEDSKTWHWLRKEARSG 370 Query: 328 AWR----KPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGF 383 +R + +QL ADV ++ + + ++A +P + F Sbjct: 371 HFRLNKEMAEAFKQLTAVCVADVAATNAAQNDVIHAQMYGKRLVKMAYLMPVHTS-DLDF 429 Query: 384 KGVE 387 G + Sbjct: 430 SGKD 433 >UniRef50_C0A6X1 Polynucleotide adenylyltransferase region n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6X1_9BACT Length = 499 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 131/391 (33%), Positives = 164/391 (41%), Gaps = 50/391 (12%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVG---STPQEMLDAGYQQ--VGRDFPVFLHPQTHEEY 58 LVGG VRDALLGL KD D V G +T L VGR F V EEY Sbjct: 38 RLVGGCVRDALLGLVAKDFDVEVCGVDFATLHRALSPFGATDVVGRSFGVIKLRLDGEEY 97 Query: 59 --ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGE----------- 105 +L R E K+G+G+ GF P +T + RRD TINA+A D + Sbjct: 98 DFSLPRRESKTGAGHRGFAVEPEPGLTDAEAAARRDFTINAIAWDPFADAGGGGGRREGG 157 Query: 106 --IIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREM 163 +IDP+ G+ DL+ +LRH S AF EDPLRVLR +FA R+ +A ET AL R + Sbjct: 158 GGLIDPHGGVRDLRAGVLRHTSAAFVEDPLRVLRAFQFAGRF---DLTLAPETAALCRAI 214 Query: 164 THAGELEHLTPERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKW 222 + L ERVW E + A + P VL + G L V FPEI AL G P W Sbjct: 215 STT--FTELPKERVWGEWQKWAEKSPKPARGLAVLEESGWL-VHFPEIAALRGCPQEPDW 271 Query: 223 HPEIDTGIHTLMTLSMAAMLSP--------QVDVRFATLCHDLGKGLTPPEL------WP 268 HPE D HT A L + + A L HD GK T Sbjct: 272 HPEGDVFAHTAFCCDALAALPAWQTLPPPRRRLLMLAMLAHDFGKPATTVRAVRAGAERW 331 Query: 269 RHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFH-----DLIHTFPMLNPKTIVKLF 323 GH AGV + E R+ P + + H + I +L Sbjct: 332 TSPGHESAGVPVAEAFLTRIGAPLDHAPFITPIVANHLVHHHGGKGGGGGYSDSQIRRLA 391 Query: 324 DSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + P +E L L D GR +S Sbjct: 392 RRLA----PATIEDLCLIMTGDSEGRPPRKS 418 >UniRef50_D2L6A0 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L6A0_9DELT Length = 397 Score = 267 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 127/353 (35%), Positives = 169/353 (47%), Gaps = 37/353 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQVGRDFPVFLHPQTHEEY 58 MK YLVGGAVRD LLG PV D+D+++V +TP+ L +QVG+ FPVF+ Sbjct: 1 MKRYLVGGAVRDILLGRPVVDQDYLIVDATPEAFLRRYRRARQVGKTFPVFML------- 53 Query: 59 ALARTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDN----GEIIDPYNGL 113 G YA P + +DL RDLTINA+A D+ G + L Sbjct: 54 --------------GSAQYAWPRGDDINEDLLARDLTINAMAMGDSRQIAGRLHFHPLAL 99 Query: 114 GDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 DL++R+LR + +DPLRV R ARFAA F E LA M+ + G L + Sbjct: 100 TDLRDRILRPCGEMSMFDDPLRVYRAARFAASLP--DFSPHPELLAQMKAVAACGVLSDI 157 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ERV +E AL P FF +L + G L PE++A VPA H H Sbjct: 158 FAERVAQEVRKALDAPKPSRFFALLAETGCLLPWMPELEAARHVPAGPAEHHSGSVFAH- 216 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 MA L+ + + +CHDLGK TP WPRHHGH AG + E+L +RL++PN Sbjct: 217 --MCDMADQLAGKPIAGWMAVCHDLGKTRTPECEWPRHHGHDEAGADVAEELGKRLKLPN 274 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEAD 345 +R+ A FH + L T V + + + VE L AD Sbjct: 275 RVRESGVAAARFHMKAARYHELRAGTRVDMLTWLHKH---ELVEPLFEVVRAD 324 >UniRef50_A0Q8A2 CCA-adding enzyme n=18 Tax=Francisella RepID=CCA_FRATN Length = 369 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 155/393 (39%), Positives = 224/393 (56%), Gaps = 41/393 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD LLG+ KD+DWVVVG+T EML G+ ++ +FPVF+HPQT +EYAL Sbjct: 1 MKFYLVGGAVRDMLLGITPKDKDWVVVGATEDEMLANGFIKIAANFPVFIHPQTKQEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR+E+K+ +GY GF + +TLEDDLKRRDLTIN++A D N ++IDP+NG DLQNR+ Sbjct: 61 ARSEKKTANGYHGFEVNFSKYITLEDDLKRRDLTINSIAIDQNNKVIDPFNGQADLQNRI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH S AF EDPLRV+R+ARF A+ ++ F IA+ETL L++E+ GEL HLT ER+ E Sbjct: 121 LRHTSIAFIEDPLRVVRLARFKAQLSNFNFSIAEETLTLIKELIKTGELNHLTRERLHIE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDA-LFGVPAPAKWHPEI--DTGIHTLMTLS 237 AL NP++FF L + AL+++FP I L +P + + I D+ I+ +TL Sbjct: 181 FVKAL--NNPKIFFTTLEELEALKIIFPNISCILLLIPNKSFFENPIYKDSNINEKITLC 238 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKL----------VEQLCQR 287 + + ++D D+ K L L +H+ A + + E++ Q Sbjct: 239 LLKVPQQKLD--------DIRKELL---LTNKHYKLLKASIAISKILEDRNITAEEIFQL 287 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 ++ N IRD L AE +L K +K+ D+I P R QL T+ ++ Sbjct: 288 IKNANIIRDK-NLFAESLNLY--------KKYLKVCDTI----TPHRNYQLLQTTINTIK 334 Query: 348 --GRTGFESADYPQGRWLREAWEVAQSVPTKAV 378 P+ + ++ + K + Sbjct: 335 NASINSLTIETIPKDKLRNTLKQLYIDIIKKQL 367 >UniRef50_C7LRX4 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRX4_DESBD Length = 459 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 184/422 (43%), Gaps = 40/422 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY--------QQVGRDFPVF---L 50 K + VGG VRD G KD D V G + + + G+ F V L Sbjct: 18 KAFFVGGCVRDKFFGYDSKDIDIEVYGHDFDAICEVVKGIPVVQDVFECGKSFNVVKVRL 77 Query: 51 HPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPY 110 + A+ R E +G G+ + P ++ E+ RRD ++NAL + +GEIID + Sbjct: 78 ICGADLDIAVPRREVSTGGGHKDYVILPDPSMSPEEASARRDFSMNALMETFDGEIIDFH 137 Query: 111 NGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 NG+ DL+ + LR + +F +DPLRVLR +FA R+ G R+ + T L ++ G + Sbjct: 138 NGVQDLKTQRLRAIGNSFLDDPLRVLRGMQFAGRF---GLRVEEHTAYLCALIS--GRVL 192 Query: 171 HLTPERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 ++ ER+W E E + P Q L D GA+ VL+PE+ AL G+ HPE Sbjct: 193 AMSKERIWGEWEKLLSKSDKPSFGIQFLEDTGAI-VLYPELSALDGLRQDPTHHPEGCVL 251 Query: 230 IHTLMTLSMAAMLS--------PQVDVRFATLCHDLGKGLTPP--ELWPRHHGHGPAGVK 279 HT M L A ++ +V + A +CHD GK LT + HGH AG + Sbjct: 252 THTKMVLDEGARIALKENLEHQSRVILLLACICHDFGKALTTTMVDGRISCHGHAEAGSE 311 Query: 280 LVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLA 339 + + P +R+ + + H + + K + KL + I+ ++ L Sbjct: 312 MTAAFLDSIGAPAALREPVSQLCQHHMDLI-SGDVTAKQVRKLANKINRSSSLGLLKHLI 370 Query: 340 LTSEADVRGRTGFESADYP--QGRWLREAWEVAQSVP-----TKAVVEAGFK-GVEIREE 391 + AD GR + L +A +V + P + +V G K G Sbjct: 371 V---ADNLGRGSASRYPAVVDEMMELAKAEDVTNTAPKPLLQGRDLVRMGLKQGPMFGRI 427 Query: 392 LT 393 L Sbjct: 428 LN 429 >UniRef50_C8WIX9 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WIX9_EGGLE Length = 465 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 109/419 (26%), Positives = 163/419 (38%), Gaps = 41/419 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT----HE 56 + ++VGG VRDALLG P D D + + Q++ Q R T + Sbjct: 31 FETWIVGGYVRDALLGRPSSDID-IATQAHWQDVQRVFEGQGYRTHETGTAHGTLTVIVD 89 Query: 57 EYALARTERKSGSGYTG--FTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 E AL T +S Y + T+ +DL RRD T+NALA + DPY G Sbjct: 90 EQALEVTTYRSDGAYADARHPNQVSFVRTIAEDLARRDFTMNALAYHPARGLFDPYGGHA 149 Query: 115 DLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL+ +++R V F ED LR+LR RFAA LGF I T M + + G L Sbjct: 150 DLEAQIIRAVGDPDRRFSEDALRMLRACRFAA---ELGFAIDPNTFEGM--LANKGLLPR 204 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++ +R+ E + L + D L + PE+ A+ G +H D H Sbjct: 205 ISTQRITHELQRLLLGEHAGRALTATVD--VLAAVLPELVAMKGFEQRTPYHI-YDVLEH 261 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQLCQRL 288 T L + P VR+A L HD+GK T + +GH V L + RL Sbjct: 262 TARVLD---GVPPYPLVRWAALFHDMGKPAAFFTDEDGTGHFYGHAAISVMLARGIMDRL 318 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 + + + E HD + PK + + + + L D RG Sbjct: 319 ALSSAFAAQVLTLVERHDDVIDR---TPKAVKRALSRLGG--NVELFAALCDLKRGDARG 373 Query: 349 RT----GFESADYPQGRWLREAWEVAQ-------SVPTKAVVEAGF-KGVEIREELTRR 395 + S R L E + ++ + V+E G +G + L+ Sbjct: 374 QAPRCIDRVSDADELERILSEILAADEAFSLKKLAIDGRDVIELGVPQGPLVGLALSDA 432 >UniRef50_Q47K87 Metal-dependent phosphohydrolase n=143 Tax=Actinobacteria (class) RepID=Q47K87_THEFY Length = 552 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 109/416 (26%), Positives = 170/416 (40%), Gaps = 42/416 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA------GYQQVGRDFPVFLHPQTH 55 ++ +VGG VRDALLG PV D D + P+ +L+ +G +F + Sbjct: 104 ELAIVGGPVRDALLGRPVHDIDL-TTDAVPERVLELVDGWADAVWTIGIEFGTVGLRKNG 162 Query: 56 --EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNG 112 E R+E Y +L +DL RRD T+NA+A GE +DP+ G Sbjct: 163 RQVEITTYRSESYQVKSRKPEVSY---GTSLYEDLVRRDFTVNAMAVRVPGGEFVDPFGG 219 Query: 113 LGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 L DL +R LR +F +DPLR++R RFAA+ LGF + ++ A M M A L Sbjct: 220 LRDLADRTLRTPGKPEDSFNDDPLRIMRGIRFAAQ---LGFSVDEKVAAAMTAM--AERL 274 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 ++ ER+ E + + NP++ ++ D G + PEI L + H D Sbjct: 275 RIVSAERIRDELTKLILSPNPRLGVSLMTDLGVANYVLPEIPKLKLT--VDEHHRHKDVY 332 Query: 230 IHTLMTLSMAAML------SPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKL 280 H+L L A L P + +R A L HD+GK T P H H G + Sbjct: 333 EHSLTVLDQAVDLERARGMEPDLVLRLAALLHDIGKPKTRAFQPGGKVTFHHHEVVGASM 392 Query: 281 VEQLCQRLRVPNEIRDLARLVAEFHDLIHTF--PMLNPKTIVKLFDSIDAWRKPQRVEQL 338 + LR P ++ + + H + + + + A + +L Sbjct: 393 SKNRLTALRFPKDVVNDVSKLVSLHLRFYGYGKGEWTDSAVRR-----YARDAGHLLSRL 447 Query: 339 ALTSEADV--RGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL 392 + + AD R R + R +A+ + + G EI+E L Sbjct: 448 HILTRADCTTRNRRKAAALARAYDDIERRIERLAKE-EELSKIRPDLDGHEIQEVL 502 >UniRef50_A4E6N1 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E6N1_9ACTN Length = 464 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 106/429 (24%), Positives = 167/429 (38%), Gaps = 48/429 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQ-----EMLDAGYQQVGRDFPVFLHPQTH 55 ++ + VGG VRDAL+G P D D G + E + G F Sbjct: 27 LEAWYVGGWVRDALMGYPSHDVDMCCSGLWQESKAALEAAGIAVVESGIKFGGITAISDG 86 Query: 56 EEYALARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 E + T R G G +LEDDL RRD T+NA+A ++D Y+G G Sbjct: 87 ERIEV-TTYRLDGFYTDGRHPQSVERAASLEDDLARRDFTVNAMAWHPERGLVDRYDGQG 145 Query: 115 DLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL+ +L+R V F ED LR+LR RFA R L F I ET + E A L+ Sbjct: 146 DLERKLIRAVGDPKRRFNEDALRMLRAVRFACR---LDFMIEPETKRALAEC--APLLDA 200 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 + ERV E E L+T + +LR + PE+ A G + +H + H Sbjct: 201 VARERVGIELEGILSTGHGGDA--MLRYPELICASVPELAAGRGFDQRSVYHA-FNVYEH 257 Query: 232 TLMTLSMAAML------SPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVE 282 L++A L +P + +A HD+ K +GH G K Sbjct: 258 IARVLTVAGELALCDGVAPSSSLMWAAFLHDVSKPECFTVDHAGSGHFYGHPELGAKKAR 317 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKT--IVKLFDSIDAW--RKPQRVEQL 338 + RL + +++ L+ ++HD L P+ ++ + ++ + +++L Sbjct: 318 VIMDRLALSHDLVRDVCLLIKYHD-----KPLRPERSCLLNMMRALSGEGVDTARLIDEL 372 Query: 339 ALTSEADVRGRTGFESADYPQGRWLREAWE-----------VAQSVPTKAVVEAGFK-GV 386 AD G+ +R ++ ++ AG K G Sbjct: 373 MDLKRADTLGKAPSCFYYVETIEEMRALAHELLKAGEPYTLKMLAINGGDLIRAGVKPGP 432 Query: 387 EIREELTRR 395 E+ + L Sbjct: 433 ELGQLLNSA 441 >UniRef50_C6BVC7 Polynucleotide adenylyltransferase region n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVC7_DESAD Length = 387 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 116/410 (28%), Positives = 179/410 (43%), Gaps = 36/410 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEY 58 +KI + GG++RD LLG KD D+++ +P+E L A + VG+ + +F + Sbjct: 8 LKILIAGGSIRDLLLGRSPKDLDYLIASGSPEEFLAAFPKARPVGKSYEIFYLKGLEFSF 67 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 A+ D T++ DLK RD T+N+ A D++GE+ NGL DL+N Sbjct: 68 PRAKGNNT--------------DETIDLDLKARDFTVNSFALDEDGELYAHPNGLEDLRN 113 Query: 119 RLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R+LR P F EDPLRV R A F +R+ F E +A M+ L + P+R+ Sbjct: 114 RVLRPSFPDTFKEDPLRVFRAATFISRFPE--FSPHPELIAEMKRCADNDWLADIAPDRI 171 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 E AL+ P F ++L L F E + +PA + + HT + Sbjct: 172 GVELRKALSGPKPGNFLRLLIQGNCLEPWFSEFNGSDNIPAGPPEYHDKSVAGHTAEIMD 231 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 A + + + HDLGK LT ++ P H+GH AG+ ++L RL +P + Sbjct: 232 EVA---GEPLTCWMAMSHDLGKVLTTADILPSHYGHDKAGMIPAKELGSRLMLPVKFIRA 288 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY 357 AE H + L P T V L + +E + AD RG E+A Sbjct: 289 GESAAELHMKAGNYQELRPGTKVDLLMKLHV---SGLLENMISLCNAD-RGEGLLETAP- 343 Query: 358 PQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQR 407 L E +V+ + + G E E+L R + ++ R Sbjct: 344 ---ADLAEILKVSLPAHERNL------GKESGEKLRNMRAMKIKTFSGSR 384 >UniRef50_C4F914 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F914_9ACTN Length = 481 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 115/436 (26%), Positives = 166/436 (38%), Gaps = 56/436 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV-----GRDFPVFLHPQTH 55 ++ ++VGG VRDAL+G P D D GS + + + G F + Sbjct: 39 LEAWIVGGWVRDALMGAPGHDIDICCSGSWEESAAALRSRGIAVVESGVKFG-GITAVVD 97 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 R G G T +EDDL RRD T+NA+A ++D Y+G G Sbjct: 98 GARIEVTAYRLDGFYTDGRHPENVQRATCVEDDLARRDFTVNAMAWHPARGLLDCYDGRG 157 Query: 115 DLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL+ R +R V F ED LR+LR RFA R L F + T + E A L+ Sbjct: 158 DLERRQIRAVGEPRRRFEEDALRMLRAVRFACR---LDFAMDPATAQALAEC--APLLDQ 212 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 + ERV E E L TR+ +R + PE+ + G +H D H Sbjct: 213 VARERVGIELEGILVTRHGGDAL--IRYPELMCAAIPELARMRGFDQRTPYHA-FDVYDH 269 Query: 232 TLMTLSMAAMLS------------PQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPA 276 T L++A LS P + +A L HD+ K +GH A Sbjct: 270 TARVLTVAGELSRFRIDGGDPSAPPSPSLMWAALLHDIAKPDCFTVDERGRGHFYGHPEA 329 Query: 277 GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQ--- 333 G KL E++ +RL N++ L+ HD LNP I L + + + Sbjct: 330 GAKLAEKIIRRLSCSNDLIRDVSLLIHDHDC-----PLNPDRI-SLLRQMQRFARSGVDT 383 Query: 334 --RVEQLALTSEADVRGRTGFESADYPQGRWLREAW------EVAQSVPTKAVVEAGFK- 384 + +L AD G+ + +RE A S+ T + + Sbjct: 384 ARLMGELLDLKRADTLGKASGCFYYVEEIERMREMCRELLANREAYSIKTLDLAGSDLIA 443 Query: 385 -----GVEIREELTRR 395 G I E L R Sbjct: 444 RGMAPGPRIGEALNRA 459 >UniRef50_A6P236 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P236_9BACE Length = 438 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 111/446 (24%), Positives = 172/446 (38%), Gaps = 61/446 (13%) Query: 1 MKIYLVGGAVRDALLG-LPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFLHPQTHEE 57 + +LVGGAVRD ++G KD D + + PQ++ + +GY + + Sbjct: 19 FEAFLVGGAVRDYVMGKRAAKDWD-IATSALPQQVKAVFSGYHLIETGLKHGTVTVVVDH 77 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 + T ++ SG P +L DL+RRD T+NALA + ++D G GD++ Sbjct: 78 QPIEITTYRTDSG--------CPSPSLRADLERRDFTMNALAYNPRTGVVDLVGGAGDIE 129 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++R F ED LR+LR RFA+ Y G I T +R + L + Sbjct: 130 KGIVRCTGDPDRRFREDGLRILRALRFASVY---GMEIDAATADAIRR--NQSLLRGVAV 184 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E L +N G L V PE+ +FG H + D HT Sbjct: 185 ERIQVELTGILCGKNAAAVLSDF--AGVLAVTVPELAPMFGFAQHNPHHDK-DVWNHT-- 239 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 +++ +SPQ +R+A L HD+GK L + GH L + RLR Sbjct: 240 -VAVVENVSPQPVLRWAALLHDIGKPLCFSRTEDGVGHFFGHAQKSALLAGDILSRLRFD 298 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 N R+ + +HD+ T K + +L + QL AD G++ Sbjct: 299 NAGRERIVRLVRYHDMPITADR---KLVKRLLSKHGE----ETARQLIELHRADTLGQSD 351 Query: 352 FESA----DYPQGRWLREAWEVAQ-------SVPTKAVVEAGFKGVEIREELTR------ 394 L E + +V ++ G G +I L Sbjct: 352 ICQYRLGILDEVDAMLEELLREERCFSLKDLAVDGSDMMGLGLTGRDIGRMLQECLNAVL 411 Query: 395 ------RRIAAVASWKEQRCP--KPE 412 R A +A Q CP +P+ Sbjct: 412 DERIPNERNALLAFAGRQACPTVQPQ 437 >UniRef50_A5FA68 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=15 Tax=cellular organisms RepID=A5FA68_FLAJ1 Length = 495 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 109/412 (26%), Positives = 180/412 (43%), Gaps = 41/412 (9%) Query: 4 YLVGGAVRDALLGLPVK-DRDWVVVGSTPQEMLDAG-------YQQVGRDFPVFL--HPQ 53 Y++GG VRD LL K D D V VGS + L QV + + + Sbjct: 49 YVIGGFVRDLLLNRGSKKDIDVVAVGSGIELALKVSDLLPNKPKVQVFKTYGTAMLRFED 108 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDP 109 T E+ AR E + + TL+DD RRD TINALA N G+++DP Sbjct: 109 TDIEFVGARKESYTRDSRNPIV----ENGTLQDDQNRRDFTINALALSLNSTNFGDLLDP 164 Query: 110 YNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 ++GL DL+N+ ++ + +DPLR+LR RFA + L F I + +L + + +A Sbjct: 165 FDGLTDLENKTIKTPLDPDITYSDDPLRMLRAIRFATQ---LNFEIEENSLNAITK--NA 219 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 ++ ++ ER+ E L+T P F +L G L ++ PE+ AL V + H Sbjct: 220 DRIKIISGERIVDELNKILSTPKPSSGFLLLYKTGLLDLILPELTALNQVE-EIEGHTHK 278 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQ 283 + HTL + + V +R++ L HD+GK T + HGH G K+ ++ Sbjct: 279 NNFYHTLEVVDNICPNTDDVWLRWSALLHDIGKAPTKRFTKKQGWTFHGHEFLGGKMAKK 338 Query: 284 LCQRLRVP-NEIRDLARLVAEFHDL--IHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLAL 340 + +RL +P N + + + ++ + +L + + VE L Sbjct: 339 IFERLHMPLNHKMKFVQKMVIMSSRPIVLAQDIVTDSAVRRLV-----FDAGEDVENLMT 393 Query: 341 TSEADVRGRTGFESADYPQGRWL--REAWEVAQSVPTKAVVEAGFKGVEIRE 390 EAD+ + + Y + + ++ EV + + G EI E Sbjct: 394 LCEADITTKNPSKFKKYHKNFEIVRKKIVEVEERDHVRNFQPP-ISGEEIME 444 >UniRef50_C8W9Z0 Metal dependent phosphohydrolase n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W9Z0_ATOPD Length = 492 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 92/410 (22%), Positives = 151/410 (36%), Gaps = 27/410 (6%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY------QQVGRDFPVFLHPQT 54 + ++VGG VRDAL G D D + +T Q+ A + G + Sbjct: 54 FEAWIVGGWVRDALRGSFAHDID-ITTLATWQQSKAAFVAAGIPVHETGIAYGTVTAVVE 112 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGL 113 + T R G G + V+ +E DL RRD TINA+A ++D Y G Sbjct: 113 QHPIEV-TTYRCDGEYLDGRRPDSVQFVSCIEKDLARRDFTINAMAYHPKRGLLDLYGGQ 171 Query: 114 GDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 DL ++R V F ED LR+LR RFA R++ F + ++T + E A L Sbjct: 172 EDLSAHVIRSVGEPKARFTEDALRMLRALRFACRFS---FSVEEKTHQALIEC--APLLS 226 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGI 230 + ER+ E + + ++ L V PE+ L + +H D Sbjct: 227 QVASERIGLEVAQIVEGGHIAHAIKL--GFSVLAVAIPELLLLQNFDQRSPYHA-YDVLK 283 Query: 231 HTLMTLSMAAMLS---PQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQL 284 HT S + +R+A L HD+ K + +GH G + + L Sbjct: 284 HTARVCSATEAFTVGCATPILRWAALLHDIAKPEMFSVDADGRGHFYGHPEKGADVAKVL 343 Query: 285 CQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEA 344 +RL +P + + + HD + + +V L + L +A Sbjct: 344 LKRLALPQRLINEICALVALHDYDVDVTTASLRHMVALLAEVSKSDGITLAYDLLTLKQA 403 Query: 345 DVRGRT-GFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELT 393 D + + R A+ + + G +I + L+ Sbjct: 404 DALAKAVPYRGYAVALERMFSLLKNEAKKGIAQRPQDLCISGADIMQALS 453 >UniRef50_A1AQP2 Metal dependent phosphohydrolase n=4 Tax=Desulfuromonadales RepID=A1AQP2_PELPD Length = 404 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 117/408 (28%), Positives = 179/408 (43%), Gaps = 34/408 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 +++LVGG VRD LLG +D D V + E+ G++ V + + + + Sbjct: 19 RVFLVGGCVRDHLLGRGCRDIDLVA-ALSGDELGRCGFRLVAGRSTAPIWFRHDDAF--- 74 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 G T P+ L+ DL+RRD TIN+LA D G + DP++G GD+ R L Sbjct: 75 --------GTIELTPLTCPEA-LDADLRRRDFTINSLAMDLRGNLHDPFDGRGDIMGRFL 125 Query: 122 RHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 R SP F +DPLR+ R RF + G+ + E L+ + + EL + ER +E Sbjct: 126 RPCSPDTFRDDPLRIFRAFRFESD----GWSMTGECQYLIGQHQWSEELSRIPMERFSRE 181 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA-PAKWHPEIDTGIHTLMTLSMA 239 A + P+ FF + G PE+ + +PA P ++HPE D H++ + Sbjct: 182 MLKACSAARPERFFLAMLKFGVGAGYLPELFRMARIPAGPLRYHPEGDLLTHSIQVMQRV 241 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 A S RF L HD+GK T P +P HHGH +GV+L QLC RLR+ R+ Sbjct: 242 AERSTDPLARFCALFHDIGKLSTDPARYPSHHGHDRSGVELARQLCSRLRLSARYRNALA 301 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 + H + + L T ++ + + K L L S AD R E Sbjct: 302 AICRLHMTFNNWEELRDGTRLR---AAEQAVKSGITGILPLVSAAD---RARSEE----- 350 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQR 407 W A V + +E G ++ + R + + +R Sbjct: 351 ----PAGWSRAVQVVRMSTIELGMDQQQLEKMPADLRSDLILQLRIER 394 >UniRef50_B7CE33 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CE33_9FIRM Length = 438 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 103/411 (25%), Positives = 168/411 (40%), Gaps = 39/411 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG---RDFPVFLHPQTHEEY 58 + Y+VGG VRD LL P+ D D + + P+ +L+ + VG + V + + E Sbjct: 20 EAYVVGGCVRDYLLDRPIHDYD-ICTSAKPEVILNLFDRSVGTGLKHGTVTVLSNSPVEI 78 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 R E + + T+E+DL RRD T+NA+A N +IDPY G DL+ Sbjct: 79 TTFRLESEYKDHRHPDSVKYV--STIEEDLSRRDFTVNAMAYHPNRGLIDPYKGQFDLKA 136 Query: 119 RLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +++R V F ED LR+LR RF A+ LGF + + + T+A +++++ E Sbjct: 137 KVIRCVGNPDRRFNEDALRMLRAYRFCAK---LGFSMDETVKKSI--DTNATLIQYVSIE 191 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E + + T + L L+ +F E+D + +H D HTL Sbjct: 192 RIVHELKEIMETNPQVLASMTL----LLKPVFNELDLALRCSQNSIYHY-TDVLHHTLD- 245 Query: 236 LSMAAMLSPQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 +M + + F L HDLGK T H G +L ++LC+R ++ N Sbjct: 246 -AMCYLKPYDETLAFVLLFHDLGKIQVKTTDSNGKDHFKHHAKVGSELSKELCRRFKLTN 304 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 E R HD T + I K + + + L D + Sbjct: 305 EQRKWIPFYVLHHDDKFTCDL---DCIYK--YRVTYHLDEEHLLNLLQIRYCDAMAHSEL 359 Query: 353 ESADYPQGRWLREAW----EVAQSV-----PTKAVVEA-GFKGVEIREELT 393 + + S+ K ++EA +G +I+E L Sbjct: 360 GQKSAKDVELFYDYYIQNRNRCMSISQLALNGKDIIEATNLRGKQIQEALN 410 >UniRef50_C0WDS1 Metal-dependent phosphohydrolase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WDS1_9FIRM Length = 484 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 102/429 (23%), Positives = 158/429 (36%), Gaps = 57/429 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA-------GYQQVGRDFPVFLHPQ 53 + Y+VGGAVRD L G D D +V + P+E + +G +F V + Sbjct: 21 FEAYVVGGAVRDLLCGKHPHDYD-IVTSARPEETRRLCKGAGLSVVENLGENFGVLVLLV 79 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDV-TLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 +A RK G TLE+DL RRD T+NA+A D G + DPY+G Sbjct: 80 EGRAVEVA-AYRKEVYGTDAHRPSGVAYCQTLEEDLARRDFTVNAMAMDLAGNLTDPYSG 138 Query: 113 LGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 DL++ +LR V F ED LR+ R RF A+ LGF L ++ A Sbjct: 139 QRDLEHHVLRVVGSPSDRFSEDALRMFRACRFVAQ---LGFLPEAGILPAIK--AEAPRA 193 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALR--------------VLFPEIDALFG 215 + L+ RV E L ++ G + PE+ L G Sbjct: 194 KGLSLSRVKAELHKLLRAPYAGQGMNLMVQSGLAGMSCRIKKEGTYESVPILPELLDLVG 253 Query: 216 VPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGL-----TPPELWPRH 270 VP ++HP D H L + + + +A L HD+GKG P+ P Sbjct: 254 VPQNPRFHP-FDVWGHIWHALDHSD---GSLTLGWAILLHDVGKGRKGVRGIRPDGMPSD 309 Query: 271 HGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFD---SID 327 HGH G + E + RL + + + H L + + Sbjct: 310 HGHDKVGKAMAESILHRLGENGALVNRVAFLVGNHMHFGPARFLPDAALWRWLRKEARSG 369 Query: 328 AWR----KPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAW---------EVAQSVP 374 A+R + +L AD+ T + + + + ++ Sbjct: 370 AFRCTKDLQEAFRELGTLCLADMAATTASAESQALARHFADQLFLMAGTMPVHTADLAIS 429 Query: 375 TKAVVEAGF 383 + ++ AG Sbjct: 430 GRDLIAAGI 438 >UniRef50_B1ZUE5 Polynucleotide adenylyltransferase region n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUE5_OPITP Length = 463 Score = 261 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 130/380 (34%), Positives = 168/380 (44%), Gaps = 39/380 (10%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY-----QQVGRDFPVFLHP----QT 54 LVGG VRD LLGL KD D V G+ + + A VGR F V Sbjct: 12 RLVGGGVRDWLLGLEAKDFDVEVAGADFETLQRALAPFGATDVVGRSFGVIKVRSAASGA 71 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGL 113 +++L R E K+G+G+ GF P ++ D RRD TINA+A D GE+IDP++G Sbjct: 72 EYDFSLPRRESKTGAGHRGFAVAPDPQLSDADAAARRDFTINAIACDPFTGELIDPHHGQ 131 Query: 114 GDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 DL R+LRH S AF EDPLRVLR + AAR+ ++A ET AL R + A L Sbjct: 132 RDLGARVLRHTSAAFVEDPLRVLRAFQLAARF---DLQLAPETAALCRTI--ADTYGELP 186 Query: 174 PERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ERVW E E A P VL LR FPE+ L G P WHPE D HT Sbjct: 187 VERVWAEWEKWATKAAKPSRGLDVLEQTDWLRH-FPEVARLRGTPQEPAWHPEGDVFTHT 245 Query: 233 LMTLSMAAMLSP--------QVDVRFATLCHDLGKGLTPPELWPR------HHGHGPAGV 278 + A + + + A L HD GK T R GH PAG Sbjct: 246 QHCVDALAANAEWQSSDPARRRLLMLAVLAHDFGKPSTTVRGEKRGAIRWISPGHEPAGG 305 Query: 279 KLVEQLCQRLRVPNEIR----DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR 334 + ++ +R+ P E+ L H + + +L + P Sbjct: 306 PIAKEFLRRIGAPLELDPPVCALVVHHLVHHHGAGGEDNYSDSQVRRLARKLA----PAT 361 Query: 335 VEQLALTSEADVRGRTGFES 354 ++ LAL AD GR ES Sbjct: 362 IDDLALVMIADSNGRPPLES 381 >UniRef50_C4XGZ8 Putative tRNA nucleotidyltransferase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGZ8_DESMR Length = 391 Score = 261 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 133/410 (32%), Positives = 183/410 (44%), Gaps = 48/410 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQVGRDFPVFLHPQTHEEY 58 MK YLVGGAVRD LLG PV D+D+++V +TP+ + +QVG+ FPVF+ Sbjct: 1 MKRYLVGGAVRDILLGRPVVDQDYLIVDATPEAFVRRYRRARQVGKTFPVFML------- 53 Query: 59 ALARTERKSGSGYTGFTCYAAPDV-TLEDDLKRRDLTINALAQ----DDNGEIIDPYNGL 113 G YA P ++ +DL RDLTINA+A + G + L Sbjct: 54 --------------GSAQYAWPRGDSVAEDLLARDLTINAMAMGDSREIAGRLHFHPLAL 99 Query: 114 GDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 DL++R LR + +DPLRV R ARFAA F E +A MR + G L + Sbjct: 100 SDLRDRWLRPCGEMSMFDDPLRVYRAARFAASLP--DFSPHPELVAQMRAVAACGVLGDV 157 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ERV +E AL T P FFQ+L D G L PE++A VPA H + H Sbjct: 158 FAERVAQEVRKALGTTKPSRFFQLLADTGCLLPWLPELEAARHVPAGPPEHHDGSVFDH- 216 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 L M +L+ + +CHDLGK TP WPRHHGH G + +L +RL++PN Sbjct: 217 --MLDMVDILAGDALAGWMAVCHDLGKIATPECEWPRHHGHDDRGEGVAGELGRRLKLPN 274 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 +R+ A+ H + L T V + + VE L AD Sbjct: 275 RVREAGEAAAKLHMKAARYHELRAGTRVDMLTWLHKHDM---VEPLFEVVRADSGASVLP 331 Query: 353 ESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 ++ + +V SV + +G E L R +A Sbjct: 332 QA---------KRDLKVMLSVHLPG--KQRQRGPLSGERLRNLRCQKLAE 370 >UniRef50_B4S8E4 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=12 Tax=Chlorobiaceae RepID=B4S8E4_PROA2 Length = 489 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 113/420 (26%), Positives = 177/420 (42%), Gaps = 45/420 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 ++ YLVGG +RD LL P +D D +++G + Q GR+F VF E + Sbjct: 33 IECYLVGGYIRDVLLERPSQDIDIMIIGDPIAFAREVQKQLKGRNFVVF------ERFRT 86 Query: 61 ARTERKSGSG-------YTGFTCYAAPDV--------TLEDDLKRRDLTINALAQDDN-- 103 AR E PD +LEDDL RRD T+NALA + N Sbjct: 87 ARLELDDAVEGPVLLEIVGARKESYNPDSRKPITEIGSLEDDLSRRDFTVNALALELNAL 146 Query: 104 --GEIIDPYNGLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLA 158 I+D Y G+ L + +L+ F +DPLR++R ARF+++ L F + DETL Sbjct: 147 NRNRIVDLYGGIEALHSGILKTPLEPEKTFSDDPLRMMRAARFSSQ---LEFSLTDETLD 203 Query: 159 LMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA 218 ++ M + ++ ERV E + + P + ++L + G L+ +FPE+ A+ G+ Sbjct: 204 AIKAMHT--RISIVSRERVSHEFLKIMQSPKPSIGLKILFETGLLKEIFPELTAMAGIEQ 261 Query: 219 PAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGP 275 DT +HT + A S + +R A L HD+ K LT HGH Sbjct: 262 VDGL-GHKDTLLHTFQVVDKLAEKSDHLWLRVAALLHDIAKPLTKRFSRHTGWTFHGHEV 320 Query: 276 AGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRV 335 G +L ++ + +R P E + + + H H L+ + I + + + Sbjct: 321 VGTRLAAKIFRSMRWPLEPLEYVQKMIRLH---HRPIPLSKEEISDSAVRRLMFEAGEEL 377 Query: 336 EQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEA---GFKGVEIREEL 392 L ADV + + Q E V K ++ G+EI E L Sbjct: 378 NDLMTLCRADVTSKNPRKVRQIMQN--FNRVEEKIDEVAEKDLLAKWRPPVNGIEIMEIL 435 >UniRef50_C6JPJ4 Poly(A) polymerase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JPJ4_FUSVA Length = 448 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 100/412 (24%), Positives = 161/412 (39%), Gaps = 43/412 (10%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY----QQVGRDFPVFLHPQTHEEYA 59 Y+VGG VRD+LLGL KD D+ V + +++L+ +++G+ F + Y Sbjct: 27 YIVGGYVRDSLLGLKPKDCDF-VTNLSYEKLLEIFKEFHPKEIGKAFGIIQIKYKGIHYE 85 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQN 118 +A+ + G + +DLKRRD TINA+A D +N ++ + D+ N Sbjct: 86 IAKYRKDIGVPEDRREQEVEFTDNIMEDLKRRDFTINAVAFDGENYRYVEH--AVEDIMN 143 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 + LR V EDPLRV+R RF + L + ++ L+ E Sbjct: 144 KNLRFVGGAPERIKEDPLRVMRFIRFLVTKNLNNKNDIKQILPYI------PLVKKLSME 197 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E +T + ++L G L L PE H + H Sbjct: 198 RMRDEFSKIITADDAHSAIELLEKTGILEYLIPEWTKTKKFNQRNPHH-NLTLDEHIKKV 256 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTP--PELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 + A + +++R A L HD+GK T +GH L E++ R++ N+ Sbjct: 257 V---ASIEGDIELRLAALLHDIGKPQTYTLKNGIGHFYGHEQESAVLAEKILLRMKYANK 313 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 I L+ H ++ N K KL + I P+ L EAD Sbjct: 314 IVKNVTLLIANH--LNNSKNSNKKYCKKLIEKIGYENMPK----LFKLMEADRIAHKPP- 366 Query: 354 SADYPQGRWLREAWEVAQS-----------VPTKAVVEAGF-KGVEIREELT 393 D+ L+ A+ + V ++ G KG +I E L Sbjct: 367 -FDFTALDKLKIAYYEICNNNEPISIKDLVVNGNDMIALGITKGKDIGETLK 417 >UniRef50_B9CKT6 Cca-adding enzyme n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKT6_9ACTN Length = 473 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 90/411 (21%), Positives = 152/411 (36%), Gaps = 29/411 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--------VGRDFPVFLHP 52 + ++VGG VRDALLG D D + + ++ + + + Sbjct: 39 FEAWIVGGWVRDALLGSATHDID-ITTSAHWEQTAETYRAAGYVVHETGIKHGTVTVVVN 97 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 E RTE +++ DL RRD T+NA+A ++DPY+G Sbjct: 98 GHPLEITTYRTEGTYSDHRHPDEVCFVD--SIDKDLARRDFTVNAMAFHPRRGLLDPYHG 155 Query: 113 LGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 DLQ R +R V A F ED LRVLR RFA + LGF I +T + A L Sbjct: 156 QYDLQQRCIRAVGDAQSRFEEDALRVLRAIRFACK---LGFSIEKKTADAL--SASASRL 210 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 + ER+ E + + ++ G + PE+ A+ G +++H D Sbjct: 211 AFVAQERIGNEMCAIMDAGVMARALRIGF-AGVAAAV-PELAAMEGFDQQSQYHA-YDVC 267 Query: 230 IHTLMTLSMAAMLS---PQVDVRFATLCHDLGKGLTPPE---LWPRHHGHGPAGVKLVEQ 283 HT + S +R+A L HD+ K T E GH ++ + Sbjct: 268 EHTARVCAGVEAFSAGRASCALRWAALLHDVAKPKTFSEDVSHRGHFFGHPEVSAQMAQT 327 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 + + + +P + A + +HDL + + + + D Q+ + Sbjct: 328 ILESMAIPQSVVRQAIQLIRWHDLEIDKNIPSIRRFIATLDEGWIGGGALLATQIIELKQ 387 Query: 344 ADVRGRTGFESADYPQGRWLREAW-EVAQSVPTKAVVEAGFKGVEIREELT 393 AD + + + + Q + + G +I + L Sbjct: 388 ADALAKAPACREYALELDDISRMVRQEIQKGVAQNPQDLAVSGTDIMQLLH 438 >UniRef50_D1U5B9 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5B9_9DELT Length = 370 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 127/404 (31%), Positives = 178/404 (44%), Gaps = 42/404 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEY 58 M +YL GGAVRD LLG P+ DRD++V G+T QE D ++VGR FPVFL Sbjct: 1 MNVYLAGGAVRDLLLGRPINDRDYLVTGATRQEFTDRFPNSREVGRTFPVFLL------- 53 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 G +V +E +L+ RDLT+NA+ D++G++I + L DL + Sbjct: 54 -------------DGLEFSFPREVAVEQELRSRDLTVNAMLLDEDGDLICHPDSLDDLHS 100 Query: 119 RLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R LR S +F DPLRV R ARF A+ F DE + MR + G L L +RV Sbjct: 101 RTLRPASRQSFLSDPLRVFRAARFWAKLP--DFTPHDELVETMRLVADTGLLAPLPADRV 158 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 +ET AL T +P + ++L G L F E +PA + + D HT + Sbjct: 159 GQETIKALQTASPGNYLRLLGRAGCLEPWFKEFKESMNIPAGPLPYHDTDVLEHTCRVMD 218 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 A V + LCHD+GK TP ++ P HH H G + + L +R+R+ N Sbjct: 219 SLAGDGMAV---WMGLCHDIGKTSTPKDILPSHHDHDQRGADMADTLARRIRLSNAHALA 275 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY 357 R A++H + L P T V + + R QL AD E + Sbjct: 276 GRKGAQWHMTAARYRELRPGTKVDMLMDLHLSR---VTRQLFRLVAAD-----QDEDHWH 327 Query: 358 PQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVA 401 LR + + G E L R A+A Sbjct: 328 LAALDLRTVLASRLDETQRNL------GPESGRRLRELRAQALA 365 >UniRef50_C3PKZ9 tRNA nucleotidyltransferase n=2 Tax=Corynebacterium RepID=C3PKZ9_CORA7 Length = 545 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 117/415 (28%), Positives = 164/415 (39%), Gaps = 43/415 (10%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM---LDAGYQQV---GRDFPVF--LHPQT 54 +YLVGG+VRDALLG D D+ + P + L+ + V G DF + Sbjct: 108 LYLVGGSVRDALLGRLGNDLDF-TTPARPDVVYSILEEWAETVWDTGIDFGTVSAAYKGQ 166 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ----DDNGEIIDPY 110 E R++ G Y TLE DL RRD +NA+A D E DP Sbjct: 167 QIEITTFRSDSYDGQSRNPEVMYGD---TLEGDLVRRDFKVNAMAIELRSDGTREFHDPM 223 Query: 111 NGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 GL DL R+L +F +DPLR+LR ARFAA+ L F +A M +M AG Sbjct: 224 GGLDDLAKRILDTPDAPEISFHDDPLRMLRAARFAAQ---LEFDVAQRVRDAMIDM--AG 278 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 E++ +T ERV E + P +L D G +FPEI AL P H D Sbjct: 279 EIQRITVERVQVELNKLICGTAPWKGIDLLVDSGIADYVFPEIPALRMAPDEHAQHK--D 336 Query: 228 TGIHTLMTLSMAAMLS---PQVDVRFATLCHDLGKGLT--PPELWPRHHGHGPAGVKLVE 282 H+L L A P + +R+A L HD+GK T + H H G KL Sbjct: 337 VYAHSLTVLRQAMEQEEEGPDLILRWAALLHDIGKPDTRDTTDGKVSFHHHEVVGAKLTR 396 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTF--PMLNPKTIVKLFDSIDAWRKPQRVEQLAL 340 + ++L+ P + + H H F + + + +L Sbjct: 397 KRLRKLKFPKATTEDIGQLVYLHMRFHGFGDGQWTDSAVRRYVTDAGDL-----LPRLHK 451 Query: 341 TSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVE---AGFKGVEIREEL 392 AD R ++ + + E + K + G EI E L Sbjct: 452 LVRADCTTRNERKARRLQRTY--DQLEERIADIAAKEDLARVRPDLDGNEIMEIL 504 >UniRef50_C5RPI7 tRNA adenylyltransferase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RPI7_CLOCL Length = 454 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 93/419 (22%), Positives = 178/419 (42%), Gaps = 44/419 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTH----EE 57 + ++VGG VRD++LG+ KD D + + P+E+++ + P + T E+ Sbjct: 26 EAFIVGGCVRDSILGIKPKDWD-ITTSAEPEEIIELFNSEGCTTVPTGIKHGTITVVIEK 84 Query: 58 YALARTERKSGSGYTG--FTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 T + Y +LE+DLKRRD TINA+A +D ++D +NG D Sbjct: 85 EPFEITTYRIDGEYKDSRHPSEVKFTKSLEEDLKRRDYTINAMAYNDKVGLVDYFNGQED 144 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 + +L+R V ED LR+LR RF+A+ LGF+I ET ++ ++ + + Sbjct: 145 IDKKLIRAVGEPKKRLEEDALRMLRAHRFSAQ---LGFKIEKETSEAIKALS--VNIRQV 199 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER+ +E L + N FQ L + G L+ F E+ F +K +I H Sbjct: 200 SIERIREEFNKILLSNNLVQLFQ-LYENGLLQHFFGELANCFE---RSKKKGDISIYSHV 255 Query: 233 LMTLSMAAMLSPQVDVRFAT---LCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLR 289 + + + + ++ +R+A ++ L + P + + +R++ Sbjct: 256 YL-IELLQSIEKELSLRWAILINYINEFSYNLEDTLVKPNQCKYSTTSQDCASNILKRMK 314 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR-- 347 N+ + ++A++ ++I + + I ++ ++ + + L EA ++ Sbjct: 315 YDNKTIERVLVLAKYQEVI----ISDKVAIKRILNTTGI----ENFKALVEIKEAKIKLQ 366 Query: 348 GRTGFESADYPQGRWLREAWEVAQS----------VPTKAVVEAGFK-GVEIREELTRR 395 R E +E+ S V + +++ G K G I E L Sbjct: 367 SENDINEGMKEIVRIKEEFYEIISSNQCFTIKDLAVKGEDIIKLGVKPGKFIGEILNTL 425 >UniRef50_A2VMT0 Poly(A) polymerase pcnA n=5 Tax=Corynebacterineae RepID=A2VMT0_MYCTU Length = 514 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 109/413 (26%), Positives = 164/413 (39%), Gaps = 36/413 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA------GYQQVGRDFPVFLHPQTH 55 ++YLVGG+VRDALLG D D+ + P+ + + G +F ++ Sbjct: 38 ELYLVGGSVRDALLGRLSPDLDF-TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSD 96 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDPYN 111 + T R LE DL RRD T NA+A GE +DP Sbjct: 97 HRMEI-TTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLG 155 Query: 112 GLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 GL L+ ++L S +FG+DPLR+LR ARF ++ LGF +A A + EM A + Sbjct: 156 GLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQ---LGFAVAPRVRAAIEEM--APQ 210 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 L ++ ERV E + L +P ++ G V+ PEI + A + H D Sbjct: 211 LARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMR--MAIDEHHQHKDV 268 Query: 229 GIHTLMTLSMAAMLS---PQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVE 282 H+L L A L P + +R+A L HD+GK T P+ H H G K+V Sbjct: 269 YQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGAKMVR 328 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTF--PMLNPKTIVKLFDSIDAWRKPQRVEQLAL 340 + + L+ ++ D + H H + + + A + +L Sbjct: 329 KRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGAL-----LPRLHK 383 Query: 341 TSEADVRGRTGFESADYPQG-RWLREAWEVAQSVPTKAVVEAGFKGVEIREEL 392 AD R +A L E + V G +I L Sbjct: 384 LVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVL 436 >UniRef50_B8HHS6 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HHS6_ARTCA Length = 557 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 114/414 (27%), Positives = 173/414 (41%), Gaps = 36/414 (8%) Query: 5 LVGGAVRDALLGLP------VKDRDWVVVGSTPQEMLDAG---YQQVGRDFPVFLHPQTH 55 +VGGAVRD LL L D D V G + +E+ A + G+ F VF Sbjct: 63 IVGGAVRDGLLSLTQGGTVDSMDVDIEVYGLSKEEVRKALPGDVNEFGQSFGVFNTSLNG 122 Query: 56 EEY--ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNG 112 +++ AL R + K+G G+ GF P++ E RRD T+NA+ D ++GE++DP G Sbjct: 123 QDFDVALPRQDNKTGDGHRGFVVDTDPNMPFEVAFARRDFTMNAMGWDAESGELVDPLGG 182 Query: 113 LGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 DL+ +LRH F EDPLRVLR +FA R+ +A ET L REM A + Sbjct: 183 RADLEAGILRHTGDKFQEDPLRVLRGVQFAGRF---NMELAPETAELCREM--APTFHQM 237 Query: 173 TPERVWKETESALTTR-NPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 + +WK+ T + + L G FP + A GVP WHPE +H Sbjct: 238 HKDGIWKQFRKLSTEGTHISKALEALHASG-WEQHFPGLAATRGVPQDLTWHPEGPVHVH 296 Query: 232 TLMTLSMAAMLSPQ--------VDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKL 280 M AA ++ + + A + HD GK GH GV Sbjct: 297 LGMAGDQAARIARRDGLDEEETSILVLAAISHDFGKAHSTKIDENGRITSGGHHETGVAP 356 Query: 281 VEQLCQRLRVPNEIRDLARLVAEFHDLIH--TFPMLNPKTIVKLFDSIDAWRKPQRVEQL 338 + +R+ P + + H + ++ + +L +D ++Q Sbjct: 357 AKDFLERIGAPQRFHEKILPLIREHMCHNPGGEATVSDSAVRRLLRRLDNAGGGPTLKQW 416 Query: 339 ALTSEADVRGRTGFESADYPQGRWLREAWEVAQSV-PTKAVVEAGFKGVEIREE 391 + EAD GR ++ + +A + KAV +A KG + E Sbjct: 417 SQLVEADKAGRGAGARRS---RNYVPDWLAIADRIGNEKAVGKAMLKGHHLAEA 467 >UniRef50_D1PLQ0 Poly(A) polymerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLQ0_9FIRM Length = 456 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 100/422 (23%), Positives = 151/422 (35%), Gaps = 47/422 (11%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHEEY 58 Y+VGG VRD+LLG D D + + P ++ Q G Y Sbjct: 26 AYVVGGCVRDSLLGRRPGDWD-ICTSARPDQLRALFADQQLILTGEKHGTVGVVLHGSPY 84 Query: 59 ALARTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 + T R G+ V+ L +DL RRD TINA+A +ID G DL Sbjct: 85 EI-TTYRLDGTYRDHRHPDKVQFVSELAEDLARRDFTINAMAYAPGEGVIDLCGGRKDLA 143 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++R V F ED LR+LR RFAAR L F + L+ ++ Sbjct: 144 AGIIRCVGDPEARFAEDALRILRALRFAAR---LDFALDP--ATEAAAREARDSLQAVSA 198 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCG-ALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER++ E + L + L G L PE+ G P +WH D HT Sbjct: 199 ERIYTELDGLLMAQYAGKT---LAQYGEILAGAVPEVGPCIGCTQPGRWHC-FDVWQHTA 254 Query: 234 MTLSMAAMLSPQV----DVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQLCQ 286 ++ + +R+AT HD+ K L P+ GH G + + + Sbjct: 255 AAVTALDLRGQDTRGARVLRWATFLHDIAKPLCRSVGPDGAAHFKGHNQRGAAVARAILR 314 Query: 287 RLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 RL+ P+ + + A + HD I+K + A + +L AD+ Sbjct: 315 RLKAPSYLLEGAVGLIAIHD---APLPEGDAAILKCLNRYGAV----SLRRLCALKYADL 367 Query: 347 RGRT-------GFESADYPQGRWLREAWEVA-----QSVPTKAVVEAGF-KGVEIREELT 393 E + R + +V ++EAG G + L Sbjct: 368 DAHALTPEVACRREDVTIFENRMTELSKNGCFTIRQLAVNGSDLMEAGLPAGPAVGRVLH 427 Query: 394 RR 395 Sbjct: 428 AL 429 >UniRef50_B1GZF8 CCA-adding tRNA nucleotidyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZF8_UNCTG Length = 461 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 91/373 (24%), Positives = 149/373 (39%), Gaps = 45/373 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQ-----------EMLDAGYQQ----VGRD 45 +Y+VGG VRD + KD D +V G ++L Y+ + Sbjct: 26 FDVYIVGGFVRDLFIKREPKDLDIMVCGRGSNLSMQSAGINFSKILAKKYKLDKPVIFER 85 Query: 46 FPV--FLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN 103 F E+ + R E + + T A ++E D RRD TINAL N Sbjct: 86 FGTSKLFMDSEEVEFVMPRREYYNANSRNPDTQIA----SVEQDALRRDFTINALFLRLN 141 Query: 104 G-EIIDPY-NGLGDLQNRLLRHVSPA-----FGEDPLRVLRVARFAARYAHLGFRIADET 156 +I+D G+ D++N+++R P+ F +DPLR+LR R + L F+I ET Sbjct: 142 DMKILDFTSQGVVDIKNKIIRVTDPSNIEIIFKQDPLRILRAVR---QSVQLDFKIETET 198 Query: 157 LALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGV 216 M+ + +E ++PER+ E L + P F+++ + + PE+ L + Sbjct: 199 YNAMK--ISSPSIEIVSPERIRDEINKILIEKIPSKAFKIMDEINLSVKILPEVARLKNL 256 Query: 217 PAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPR--HHGHG 274 K+H + D +HTL L + +R A L HD GK T + R +GH Sbjct: 257 EQLEKYHTD-DVFVHTLKVLDRTK---NDIILRMAALLHDTGKYATCKKNGGRICFYGHD 312 Query: 275 PAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF-PMLNPKTIVKLFDSIDAWRKPQ 333 K E + +RL+ E V + H + + + Sbjct: 313 AESAKEAEAVLKRLKYSKEFIQKTVSVIKNHMYPKMYSDDWTDGAVRRFVKRCSGE---- 368 Query: 334 RVEQLALTSEADV 346 ++ + S AD Sbjct: 369 -LDLIMEISRADY 380 >UniRef50_D1C7Z9 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=2 Tax=Thermomicrobia (class) RepID=D1C7Z9_SPHTD Length = 478 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 103/338 (30%), Positives = 146/338 (43%), Gaps = 32/338 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ-------QVGRDFPV--FLHP 52 ++YLVGG+VRD LLG PV D D+ + P+ AG VG F F+ Sbjct: 44 ELYLVGGSVRDLLLGQPVTDLDF-ATSAEPELTKAAGAAAGADSVYTVGEQFGTVGFVFD 102 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYN 111 E R E L DL RRD TINA+A D +G + DP+ Sbjct: 103 GVSVEITTYREEHYP---TPDRRPKVRLGTDLVGDLSRRDFTINAIAVDARDGTVHDPFG 159 Query: 112 GLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 GL DL+ R++R V F EDPLR+LR ARFAA+ L FR+ TLA MR M + Sbjct: 160 GLDDLERRIIRAVGDPKARFAEDPLRILRAARFAAQ---LDFRVDRRTLAAMRAM--GPQ 214 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 LE ++ ER+ E L +L + LR + PE+ + + D Sbjct: 215 LERISRERIAAELNRLLIAPAAARGLALLHETDLLRWVLPEVVPMAEDTGAGRH---KDI 271 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLC 285 +HTL + + P++ VR+A L HD K +T GH G L + Sbjct: 272 WLHTLRVVEQS---PPRLAVRWAALLHDAAKPMTRSVDARGEVHFFGHERVGADLARKAL 328 Query: 286 QRLRVPNEIRDLARLVAEFHDLIHTFP-MLNPKTIVKL 322 +RL+ + D + E H ++ + +L Sbjct: 329 RRLKQERALIDRVAGLVEMHLRPASYDSTWTDSAVRRL 366 >UniRef50_B1R1E7 Cca-adding enzyme n=2 Tax=Clostridium butyricum RepID=B1R1E7_CLOBU Length = 438 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 85/404 (21%), Positives = 163/404 (40%), Gaps = 35/404 (8%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYALA 61 Y+VGG VRD L+ D D + + P+ + + + G +Y + Sbjct: 26 YMVGGCVRDLLINREPNDYD-ITTNAKPEVVARLFDKVILTGLKHGTVTVVINKVQYEV- 83 Query: 62 RTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 T R+ G VT +++DL RRD TINA+A + +ID ++GL DL+N++ Sbjct: 84 TTYREDGEYKDSRHPENVKFVTDIKNDLSRRDFTINAMAYNKEKGLIDYFDGLSDLKNKV 143 Query: 121 LRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +R V F ED LR+LR RFA + L F+I + + ++ + LE ++ ER+ Sbjct: 144 IRTVGNPEKRFTEDSLRMLRAVRFAVQ---LDFKIEESIIQSIKIL--NKNLEFISKERI 198 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 +E + ++L +C L+ + ++D + K + + H +++ Sbjct: 199 REEFNKIILKNP--NGLKLLHECSILKYVADDLDKAYDYYINDKINC-YNLYEHLILS-- 253 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 + + + +R L HDLGK + + E++ + L+ N Sbjct: 254 -SCNIKKDLSLRLTMLFHDLGKLKDWNNKLEKVDNIFIESACIAEKILRSLKYDNGTIKK 312 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY 357 + + + + + +I KL + ID + E L +A + E Sbjct: 313 VKTLITYMH----SDLEDKVSIKKLLNIIDV----ELFEDLIKVKKAHIMSENIEEVKFL 364 Query: 358 PQGRWLREAWEV-------AQSVPTKAVVEAG-FKGVEIREELT 393 + + E + + +++ G KG ++ L Sbjct: 365 NIEKLYCDIIEKNECFRIRDMRINGEDIIKIGVKKGKDVGIMLN 408 >UniRef50_C0GPD7 Polynucleotide adenylyltransferase region n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GPD7_9DELT Length = 482 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 107/379 (28%), Positives = 161/379 (42%), Gaps = 33/379 (8%) Query: 6 VGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ--QVGRD--FPV--FLHPQTHEEYA 59 VGGAVRD LL PV+D D P E L ++ + GR F +H H E Sbjct: 53 VGGAVRDILLERPVRDVDLA--SDMPLESLRKHFRAFETGRSRLFHTLCIVHQGQHLETT 110 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 L RT+ + D + RD TINA+A D+ +++DP++G DL Sbjct: 111 LFRTKHSLPAERPD--QEDTKHSLFLQDARHRDFTINAMALDEQLDLLDPFHGKKDLDRG 168 Query: 120 LLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 L+R V EDPLR+LR AR A L F I ++T + + A ++ + PER Sbjct: 169 LIRAVENPRERITEDPLRMLRAARLAC---ELDFEIEEKTALSISGL--ARDISDVAPER 223 Query: 177 VWKETESAL--TTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 + +E + ++L G L V+ PE+DAL G+ + HPE D IHTL Sbjct: 224 LGREILKMASLSGPRFARGIRLLDRLGLLPVVLPEVDALKGLYHDPRHHPEGDVFIHTLR 283 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPR--HHGHGPAGVKLVEQLCQRLRVPN 292 + + +++ HDLGK + GH A ++ Q+ QRLR+P Sbjct: 284 AIQCNDLAHDSLNMALLA--HDLGKTDIAARHPGTGFYRGHDRAAEYIIRQMGQRLRLPG 341 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 I + VA H +H + P I+++ + LA S D R Sbjct: 342 RITRAMQAVAANHMRMHGLDEMRPSKILEMVEH-------PHWALLARASVCDHAARGKE 394 Query: 353 ESADYPQGRWLREAWEVAQ 371 Q + + A + + Sbjct: 395 HGK--LQQKKIALALKKIR 411 >UniRef50_UPI00016992C1 multifunctional tRNA nucleotidyl transferase/2''''3''''-cyclic phosphodiesterase/2''''nucleotidase/phosphatase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016992C1 Length = 371 Score = 244 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 133/391 (34%), Positives = 185/391 (47%), Gaps = 44/391 (11%) Query: 12 DALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL------ARTER 65 D LL LPV +RDWVVVG ML + P + + ARTE Sbjct: 2 DQLLELPVHERDWVVVGGDEARMLAGRFSVA----PTVSSRCSSIPRTVVRSSRCARTET 57 Query: 66 KSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRHVS 125 K+G+GY GF + PDVTLE DL+RRDLTINA+A D G +IDP +G DL+N LRH+S Sbjct: 58 KTGAGYKGFAVHVGPDVTLEADLRRRDLTINAMALDQQGRLIDPLHGRDDLENGRLRHIS 117 Query: 126 PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESAL 185 AF EDP+R+LR+ARFA + GFR+A T L+++M + +L L PER+W+E E +L Sbjct: 118 DAFIEDPVRLLRLARFADKLGCWGFRVAHSTHRLLQQMAASDDLLSLKPERIWREMEKSL 177 Query: 186 TTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQ 245 P FF+VL+ CGAL+ L PE+D G A E D L A +S + Sbjct: 178 AELQPWRFFEVLQRCGALQRLLPELDTALGSSAGHAKQSETDGF----AALKRATGISTE 233 Query: 246 VDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFH 305 VRFA L + L V+ L ++LR DL R + + Sbjct: 234 SHVRFAALFYPLLGPGGD-----------------VQALVRQLRAGRAYADLLRQLQQAD 276 Query: 306 DLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSE---ADVRGRTGFESADYPQGRW 362 F P+ ++ + ++P R+ ++ A R +P GRW Sbjct: 277 R--GGFLAAAPEALLDTVSGLKPQQQPHRLAGFVAAAQGALAWGRCSASHHRLSWPAGRW 334 Query: 363 LREAWEVAQSVPTKAVVEAGFKGVEIREELT 393 LR + G +G E+ + L Sbjct: 335 LRSMRGSCR--------RQGLQGAELGQALQ 357 >UniRef50_D1PZ77 PolyA polymerase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PZ77_9BACT Length = 509 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 106/418 (25%), Positives = 169/418 (40%), Gaps = 70/418 (16%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA-------GYQQVGRDFPV--FLH 51 M+ Y+VGG VRD L P D D VVVGS + + V R+F Sbjct: 32 MECYVVGGYVRDLFLQRPSDDIDVVVVGSGIEVATKLRQLLGGKAHLTVFRNFGTAQVKF 91 Query: 52 PQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEII 107 E+ AR E S D TLEDD RRD TINA+A N GE++ Sbjct: 92 RGIEVEFVGARKESYSHDSRKPHV----EDGTLEDDQNRRDFTINAMAVCLNRERFGELV 147 Query: 108 DPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 DP++GL D+++ ++R F +DPLR++R RFA + L F I DET + Sbjct: 148 DPFDGLADMEDGIIRTPLDPDITFSDDPLRMMRCVRFATQ---LKFYIEDETFEALER-- 202 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHP 224 +A ++ ++ ER+ E + + P F L+ CG L ++ PE+ AL V Sbjct: 203 NAERIKIISGERINTELNKIMLSDQPSRGFVDLQRCGLLALILPELTALDVVETKN-GRA 261 Query: 225 EIDTGIHTLMTLS---------------------------------MAAMLSPQVDVRFA 251 + HTL + + + + Q+ +R+ Sbjct: 262 HKNNFYHTLEVVDNLCQAQQQRMERINKELAQHAPDSKEAQDLQADLEHLQANQLWLRWG 321 Query: 252 TLCHDLGKGLTPPE---LWPRHHGHGPAGVKLVEQLCQRLRVPNEIR-DLARLVAEFHDL 307 TL HD+GK T H H G K+V + +RL++P + + + + + H Sbjct: 322 TLLHDVGKTKTKRWDHAAGWTFHNHNYVGSKMVPGIFRRLKLPMDAKMKYVQKLVDLHMR 381 Query: 308 --IHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWL 363 + + +L + V+ L + EAD+ + + + + L Sbjct: 382 PIAIADEDVTDSAVRRLVNDAGN-----DVDDLMMLCEADITSKNRVKKQRFLENFRL 434 >UniRef50_B8FBG8 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FBG8_DESAA Length = 472 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 104/443 (23%), Positives = 173/443 (39%), Gaps = 70/443 (15%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 +YLVGG+VRD +LG P+KD D + E+ + F + Sbjct: 19 LYLVGGSVRDFVLGRPMKDIDLACPNAR--ELAKKLAKANNAAF--VPMEKDPAAPCFRV 74 Query: 63 TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD--------DNGEIIDPYNGLG 114 R + + + PD + DL RD TINA+A D G I+DP+NGL Sbjct: 75 VNRSDPTDFLDVVRFRGPD--IHTDLADRDFTINAMALDLENGFPQDPMGAILDPFNGLD 132 Query: 115 DLQNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 D++ +++R + +DPLR+LR RFA++ LGF I ++TLA RE+ A +LE Sbjct: 133 DIRKQIIRSLGRKNLKDDPLRILRAFRFASQ---LGFEIEEKTLADCREL--APQLERTA 187 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E +A N + + G L +FP+I + H + H+L Sbjct: 188 AERITHELITAFEAENSYSVVRKMWKAGVLLPIFPDIAPMEACQQDGFHHH--NVWEHSL 245 Query: 234 MTLSMAAMLSPQVD----------------------VRFATLCHDLGKGLT----PPELW 267 + +D ++ + L HD+GK T + Sbjct: 246 DVYEALEGVLGGLDALFGEYAPQVRECLEAGRTVPMLKLSALLHDIGKPYTGRYDEAKGR 305 Query: 268 PRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF--PMLNPKTIVKLFDS 325 GH G L + RLR+ N+ D L+ H + P++ KT + + Sbjct: 306 TTFFGHAKKGEALARKALGRLRLTNKDMDFVCLLVSEHRHVEQLAQPVVKHKTRMAWYRK 365 Query: 326 IDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQS------------- 372 + + A+ + AD + G + + R + E+ + Sbjct: 366 MGDFS-----VACAVLAMADNLSKQGRMCTETERSRREKHLMEMVREYFAEAKGALARPL 420 Query: 373 -VPTKAVVEAGF-KGVEIREELT 393 + ++E G KG + + L Sbjct: 421 LINGNDLLEIGLPKGPGLGKVLK 443 >UniRef50_Q1ASB2 Polynucleotide adenylyltransferase region n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASB2_RUBXD Length = 510 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 103/442 (23%), Positives = 163/442 (36%), Gaps = 62/442 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ------VGRDFPVF--LHPQ 53 ++YLVGG VRDAL G ++ D + P E+ VG F Sbjct: 27 ELYLVGGYVRDALSGRRGEEVD-AATDARPPEIKRLLRPHAGYMWDVGERFGTIGAAVDG 85 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNG 112 E R++R + +L DL RRD TINA+A D +G IIDP+ G Sbjct: 86 YRVEVTTYRSDRY---AEGDRHPEVSFGESLMGDLARRDFTINAVAADALSGGIIDPFEG 142 Query: 113 LGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLG--FRIADETLALMREMTHAG 167 DL+ ++R V EDPLR+LR RF A + F + + +RE +A Sbjct: 143 RRDLELGIIRPVGDPLERMREDPLRMLRAVRFVATLSTPEKPFEMTADLERAIRE--NAR 200 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 LE ++ ER+ +E + L + NP + + L G +R + PE V + H + D Sbjct: 201 WLESISAERIREEFDRILLSPNPALGLRALVRLGLMRYVVPEFMETVDVRQDTELHHK-D 259 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT------------------------- 262 HTL+ + + P+ +R A HD+GK T Sbjct: 260 VFEHTLIVV---ENVEPEPTLRRAAFFHDIGKPRTLVYEHRCTYCGARSVRREAGEGECE 316 Query: 263 -----PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDL----IHTFPM 313 +GH G + + +RL + D + H Sbjct: 317 ECGGRTVARKIHFYGHENVGSGIARRAMRRLAYSKDEVDAVAHLVREHMRPMSYAMGRDP 376 Query: 314 LNPKTIVKLFDS---IDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG-RWLREAWEV 369 + + + R+ V+ L + AD+ G + R LRE + Sbjct: 377 WTDSAVRRFIRDAHLVRGDRELANVDMLLKLARADITGSAPRRRRAAEESWRSLRERVDR 436 Query: 370 AQSVPTKAVVEAGFKGVEIREE 391 + +++ G E+ E Sbjct: 437 VREQDAIERLKSPLDGNELMEH 458 >UniRef50_C8X424 tRNA adenylyltransferase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X424_DESRD Length = 368 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 126/404 (31%), Positives = 176/404 (43%), Gaps = 43/404 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEY 58 M+IYLVGG+VRDA LG P +DRD+VV+ +T E ++VGRD PVFL Sbjct: 1 MRIYLVGGSVRDAFLGRPRQDRDYVVLQTTEDEFKRCFPRAKRVGRDSPVFLLDG----- 55 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQ 117 +T +A D+T DL+ RDLT+NALA+D G + DLQ Sbjct: 56 -------------DEYTVSSAADITA--DLETRDLTVNALARDVATGTLYAHPQAETDLQ 100 Query: 118 NRLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 R+LR V A F DPLRV R ARFAA + +R+ + LA+M E+ AG L ER Sbjct: 101 RRVLRPVCAANFRADPLRVYRAARFAACWPE--WRVHSDLLAVMHEVGQAGLLSQPAAER 158 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 V E AL P F ++ G L F E +PA + HT + Sbjct: 159 VGGEVRRALQGVRPGRFLSLIVQTGCLGAWFAEWQGAEAIPAGPPAYHSGSVLAHTCRVV 218 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 L+ + CHD+GK TP +LWP H+ H G + Q QRLR+P + Sbjct: 219 D---ELAGSETAAWMGWCHDMGKAGTPAKLWPHHYRHEHRGEAMAWQQGQRLRLPKRLIR 275 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 + A +H L + L T + L + + VE + AD Sbjct: 276 AGGIAARWHMLAGRYDALRAGTQLDLVLRLH---RAGLVEPFCELARADGS--------- 323 Query: 357 YPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 G R ++ + + +G E L + +I A+ Sbjct: 324 --PGLLPRMEADLTRVLAVSLPANKRGQGPASGEYLRQLQIRAL 365 >UniRef50_C3WFG0 Poly(A) polymerase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WFG0_FUSMR Length = 446 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 98/412 (23%), Positives = 168/412 (40%), Gaps = 40/412 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY----QQVGRDFPVFLHPQTHEEYA 59 Y+VGG VRDALLGL KD D+ V +++L+ +++G+ F + Y Sbjct: 23 YIVGGYVRDALLGLEPKDCDF-VTDIEYEKLLNIFSEYSPKEIGKHFGIIQIKIDGVHYE 81 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 +A+ + G + +DLKRRD TINA+A D + D++++ Sbjct: 82 IAKMRQDKGIPKDRKEQEIEFTKNIYEDLKRRDFTINAIAFDGEKFYYGDSDSQKDIESK 141 Query: 120 LLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 LR V EDPLR+LR RF A E ++ RE+ L++L+ ER Sbjct: 142 TLRFVGECKKRIEEDPLRILRYFRFLATKDLKHLDEDVEEISKYREL-----LQNLSVER 196 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + +E + +T +N ++L D L ++ PE G H H L L Sbjct: 197 IREEFDKIITGKNTYNILKILSDKKILEIIIPEWKECRGFNQRNIHHI-YTVDEHILQAL 255 Query: 237 SMAAMLSPQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 M + R A HD+GK + + H ++ +++ RLR Sbjct: 256 KETDM---DLITRLAIFFHDIGKPKCFSLGEDGKGHFYNHELISAEMAKEIMGRLRYDKN 312 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 + + ++H L++ K I K+ + + + + + + AD +T Sbjct: 313 SIEKVYRIIQYH-LVYRIDN-EEKFIKKMMNRL----EKEDMLRYFQVLRAD--RKTHRP 364 Query: 354 SADYPQGRWLREAWE-----------VAQSVPTKAVVEAGFK-GVEIREELT 393 ++ Q L + ++ ++ K ++E GFK G I E L Sbjct: 365 PYNFEQIERLEKLYQDIVEKNLPISIKDLNISGKELLENGFKQGKNIGEVLK 416 >UniRef50_Q4JSD7 TRNA nucleotidyltransferase n=4 Tax=Actinomycetales RepID=Q4JSD7_CORJK Length = 547 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 88/333 (26%), Positives = 136/333 (40%), Gaps = 35/333 (10%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG------YQQVGRDFPVF--LHPQT 54 +YLVGG+VRDALLG D D+ + PQ ++D G ++ L Sbjct: 79 LYLVGGSVRDALLGRLSHDLDF-TTDARPQAIVDIVTPLAETVWDTGIEYGTVSALVKGQ 137 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ----DDNGEIIDPY 110 E R ++ G + +L+ DL RRD NA+A D N ++ DP Sbjct: 138 ILEITTFRADQYDGQSRNP---EVSFGDSLDGDLIRRDFRANAIALELSPDGNHQLRDPL 194 Query: 111 NGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 GL DLQ +L +F +DPLR+LR RF ++ L F + M M+ Sbjct: 195 GGLEDLQAGVLDTPDSPEISFNDDPLRMLRACRFVSQ---LEFGVTKRVKEAMAAMSE-- 249 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 ++ +T ERV E + P V ++ + G + PE+ AL + H D Sbjct: 250 QISRITVERVAVELNKLMLGAAPWVGLDLMVETGLADHVLPELPALKLTQDEHRQHK--D 307 Query: 228 TGIHTLMTLSMAAM------LSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGV 278 H+L L A L P +++R A L HD+GK T H H G Sbjct: 308 VYWHSLKVLRNAVNLEAERGLEPSLELRMAALLHDIGKPDTRAFTESGAVTFHQHEVVGA 367 Query: 279 KLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF 311 ++ + ++L+ + + H H + Sbjct: 368 RITRRRLRKLKYSKQHVQDIGQLVFLHMRFHGY 400 >UniRef50_C9L4X1 tRNA nucleotidyltransferase/poly(A) polymerase family protein n=2 Tax=Clostridiales RepID=C9L4X1_RUMHA Length = 415 Score = 240 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 96/411 (23%), Positives = 160/411 (38%), Gaps = 61/411 (14%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHEEY 58 Y VGG VRD+LL D D + + P E+ + + V L + E Sbjct: 23 AYAVGGCVRDSLLFRSPADWD-ITTSAKPLEVKEIFKRTVDTGLQHGTVTVLIEKEGFEV 81 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 R + + LE+DLKRRD TINA+A +D ++D + G DLQ+ Sbjct: 82 TTYRIDGEYEDSRHPKEVIFT--GNLEEDLKRRDFTINAMAYNDAVGLVDVFGGRQDLQD 139 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +++R V F ED LR+LR RF+A+ LGF I ++T + + A L++++ E Sbjct: 140 KIVRCVGNPQERFTEDALRILRAVRFSAQ---LGFSIEEKTKEAAKVL--APTLKNISAE 194 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E L ++NP + + + G +++ PE D L E G TL Sbjct: 195 RIQTELLKLLVSKNPH-YLKTAWELGITKIVLPEFDVLM----------ETSMGEKTLKA 243 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 + + + R A L ++ K L +++ +RLR N+ Sbjct: 244 FAYTSADKAE---RLAVLFANMEKT-------------PEKSRDLAKKILRRLRFDNDTI 287 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 + + +H K + + P L A++ + Sbjct: 288 NKVSELVFWHT---CPWECTKKAVRIVLSQC----TPALFPVLLNVHRAELLAEEKPDKE 340 Query: 356 D----YPQGRWLREAWE-------VAQSVPTKAVVEAGFK-GVEIREELTR 394 + G + RE E +V K +E G + G +I E L+ Sbjct: 341 NLEFLEKSGEFYREIMEKKECISIKMLAVSGKDFIEMGIEPGKKIGELLSS 391 >UniRef50_C4LGI1 tRNA nucleotidyltransferase n=3 Tax=Corynebacterium RepID=C4LGI1_CORK4 Length = 511 Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 100/414 (24%), Positives = 155/414 (37%), Gaps = 40/414 (9%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA------GYQQVGRDFPVFL--HPQT 54 +YLVGG+VRDALLG D D+ + P ++ G D+ Sbjct: 65 LYLVGGSVRDALLGRLSSDLDF-TTNARPHDIHRLLESTCDAVWDTGIDYGTVSGQRSGQ 123 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGE----IIDPY 110 E R + G +L+ DL RRD T+NA+A + G+ DP Sbjct: 124 DIEVTTFRADTYDGESRNP---EVTFGDSLDKDLTRRDFTVNAMAVEVRGDGSQVFHDPL 180 Query: 111 NGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 +GL DL L +F +DPLR+LR RF ++ LG R+A M M AG Sbjct: 181 HGLTDLVRGYLDTPDDPAISFHDDPLRMLRACRFVSQ---LGLRVAPRVREAMERM--AG 235 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 +++ +T ER+ E + + +P +++ D G + PEI A+ H D Sbjct: 236 DIQRITAERIHAELDKLILGDHPTDGIELMVDTGLADYIIPEIPAMRMTRDEHMQHK--D 293 Query: 228 TGIHTLMTLSMA---AMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLV 281 H+L L A P + +R+A L HD GK T P + H G K+ Sbjct: 294 VYAHSLQVLRQAIDREPDGPDLVLRWAALLHDCGKPSTRAPKPGGGVTFYHHDVVGAKMA 353 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPM--LNPKTIVKLFDSIDAWRKPQRVEQLA 339 + + L+ + + H H + N + + + +L Sbjct: 354 RKRFRALKYSKQFIKDVSGLIYLHQRFHGYTEKAWNDSAVRRYVTDAGPL-----LPRLH 408 Query: 340 LTSEADVRGRTGFESADYPQG-RWLREAWEVAQSVPTKAVVEAGFKGVEIREEL 392 AD R ++ + L E Q A + G +I L Sbjct: 409 RLVRADCTTRNQAKARRLQRLYDDLERRIEEIQHKEDLARIRPDLDGNDIMTIL 462 >UniRef50_C6E493 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=3 Tax=Geobacter RepID=C6E493_GEOSM Length = 416 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 109/413 (26%), Positives = 176/413 (42%), Gaps = 27/413 (6%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 +I+L GG VRD LLG+ +D D + G++ V ++ E++ Sbjct: 19 RIFLTGGMVRDFLLGVECQDIDLA-AAVPAAVLASLGFRLVESKSTPNIYFSYREDFGKI 77 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 R L DL RRD +NA+A +G +IDP G DL+ R+L Sbjct: 78 EVTRLESVEE------------LTADLHRRDFRVNAMAMSLDGALIDPLGGKADLEKRVL 125 Query: 122 RHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 R +P + +DPLR+ R RF G+R+ E AL+ + + ER +E Sbjct: 126 RACTPASITDDPLRIFRAFRFECE----GWRLDGEAEALLASRDWSDAFASIPVERFSQE 181 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGV-PAPAKWHPEIDTGIHTLMTLSMA 239 AL P FF+ + + A R PE+ + V P + HPE D H++ L Sbjct: 182 MLKALAKPAPARFFRRMLEFQAGRNYLPEVFEMTQVIAGPPQHHPEGDLFTHSMQVLERM 241 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 A L+ V RF L HDLGK TP + P+HHGH G + C+RLR+P+ ++ + Sbjct: 242 AALTNDVTSRFCALFHDLGKLYTPKDQHPKHHGHAALGASAADAFCKRLRLPSALQRALK 301 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 ++ HD + + L T ++L K E L L AD G+ + + Sbjct: 302 ATSKLHDTANKWEELRDSTKIRLAVDA---VKGGIAEFLPLQVAADCGGKMPG----WEE 354 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKE-QRCPKP 411 + + + + ++++ + +RR+ + K + P P Sbjct: 355 ALRVAALNAAQLGIEPEMLDNKEVPPEKLQQIIMQRRVEELRRSKGVKTFPHP 407 >UniRef50_Q76YD7 Putative uncharacterized protein n=1 Tax=Aeromonas phage Aeh1 RepID=Q76YD7_9CAUD Length = 347 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 133/403 (33%), Positives = 192/403 (47%), Gaps = 61/403 (15%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M IYLVGGAVRD ++ KDRD+VVVGST EM+ GY+QVG DFPV+L +EYAL Sbjct: 1 MNIYLVGGAVRDMVMNREPKDRDYVVVGSTHDEMIAKGYKQVGADFPVYLDH-LGQEYAL 59 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTER +G GY F P+VTLE DLKRRD T+NA+A NG +IDPYNG D++ R+ Sbjct: 60 ARTERSTGKGYNDFVTDFNPNVTLEQDLKRRDFTMNAMALGMNGVVIDPYNGQQDIKERV 119 Query: 121 LRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 + V+P AF EDP+RVLR RFAARY FR++ T+ + G ++HLT ER+W Sbjct: 120 VNVVNPQAFHEDPVRVLRACRFAARY---DFRLSTLTMECILRCIKDGRMDHLTSERIWL 176 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMA 239 E E F L GA++ L ++ D I+TL + Sbjct: 177 EFEK-SFGTKFDDFLAHLTLSGAVKAL----------DIGGRFVN--DVKINTLW-MDHG 222 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 S V+ +FA + + + + + ++VP E + A Sbjct: 223 HKNSSPVE-QFAAMINHM-----DTKARDHFY--------------SIVKVPCEFKKFAD 262 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 +V + + V+L+ ++++ R R E++ + F + Sbjct: 263 IV--------RNSLQDSALNVRLYTALNSTRNKFR-EEI----------KNYFVDENEVS 303 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 A + SV + KG E+ + RI +A Sbjct: 304 KEKFEAAEKAFDSVSA---MNYYLKGKELGHAMMCDRINKIAD 343 >UniRef50_Q72B04 tRNA nucleotidyltransferase, putative n=4 Tax=Desulfovibrio RepID=Q72B04_DESVH Length = 383 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 119/409 (29%), Positives = 169/409 (41%), Gaps = 41/409 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-LDAGYQQVGRDFPVFLHPQTHEEYA 59 MK YLVGGAVRD L+G ++ D S + + ++VG+ V+L Sbjct: 1 MKTYLVGGAVRDILIGRTPREHDIAFEASVAHFLQANPSARKVGKRIDVYLIGNV----- 55 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 + DL +RD TINALA + +G + + L DL+ Sbjct: 56 ---------------EHRPVQGGDIRADLLQRDFTINALALEADGTLHAHPDALADLRAS 100 Query: 120 LLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 ++R SP A DP+RVLR ARFAA+ +A ETL MR + AG L + E+V Sbjct: 101 IIRPASPGALMADPVRVLRAARFAAQLPE--MSLAQETLEAMRAVAAAGYLAEMPCEQVC 158 Query: 179 KETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSM 238 +ET AL + P+ FF L G L+ F E+ L GVPA + HT+ + Sbjct: 159 RETLKALGSPAPERFFISLAKGGCLQPWFAEVADLTGVPAGPPAYHTGSAFDHTIDIMRR 218 Query: 239 AAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLA 298 A + V + CHDLGKG TP ++ PRH GH G + L QRL + N Sbjct: 219 LAGDAFDVWLGL---CHDLGKGTTPADILPRHLGHEHRGEEAATALGQRLGMSNRFIRGG 275 Query: 299 RLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYP 358 L A H + L P T V L + + + AD D+ Sbjct: 276 ALAARMHMKAGRYDTLRPHTRVDLLLVLHH---AGIIRNVWNLVTAD-------SGIDHT 325 Query: 359 QGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQR 407 E +V + KG E L + A+A+ + + Sbjct: 326 ATAMAE--LETILAVKLPPSLRG--KGPESGRMLREMQCMALAARRTEP 370 >UniRef50_D1VN96 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Frankia sp. EuI1c RepID=D1VN96_9ACTO Length = 517 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 112/457 (24%), Positives = 165/457 (36%), Gaps = 67/457 (14%) Query: 3 IYLVGGAVRDALLGL------------------------------PVKDRDWVVVGSTPQ 32 ++LVGG+VRDALLG D D+ + P+ Sbjct: 41 LHLVGGSVRDALLGDLAQARPASSARPAATTPAKPAATTPAKPAGEPPDLDF-TTDARPE 99 Query: 33 EMLDA------GYQQVGRDFPVF--LHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTL 84 +L+ + G F T E R E Y +L Sbjct: 100 RVLEMTRGWAEATWEAGIAFGTVGLARAGTRLEVTTYRAESYDRGSRNPTVSYGD---SL 156 Query: 85 EDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVAR 140 E DL RRD T+NA+A + E +D + G+ DL +LR P + +DPLR+LR R Sbjct: 157 EADLLRRDFTVNAMAVSVPDHEFVDLFGGMADLARGVLRTPGPPEVSLDDDPLRILRAIR 216 Query: 141 FAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDC 200 F A+ LG E + MR L + PERV E + + +P Q L D Sbjct: 217 FEAK---LGLTPTPELVEAMR--ARVDRLRIVAPERVRDELRKLIVSADPDRGLQRLVDV 271 Query: 201 GALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLS---PQVDVRFATLCHDL 257 GA V+ PE+ AL + H D HTL L A L P +R+A L HD+ Sbjct: 272 GAAAVVLPELPALR--MEIDEHHQHKDVYTHTLTVLRQAIELEDDGPDEVLRWAALLHDI 329 Query: 258 GKGLTPPE---LWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF--P 312 GK T H H G + + LR P ++ D L+ H H + Sbjct: 330 GKPRTRRHAAGGGVSFHHHEVVGRDMTRKRLAALRFPKDVGDSITLLVFLHLRFHGYGTG 389 Query: 313 MLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG-RWLREAWEVAQ 371 + + ++E+L +D R ++A + L E Sbjct: 390 EWTDAAVRR-----YVHDAGPQLERLHKLVRSDCTTRNKRKAAMLARHYDSLEERIAALA 444 Query: 372 SVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRC 408 + + + G +I E L R V ++ Sbjct: 445 AQEEISAIRPELSGDDIMEVLGLRPSRLVGEARQHML 481 >UniRef50_A8ZWH5 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZWH5_DESOH Length = 474 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 120/446 (26%), Positives = 175/446 (39%), Gaps = 65/446 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 K+Y+VGGA+RD L G +D D + + P ++ V L + H Sbjct: 23 KLYVVGGALRDHLAGRLPRDVDIICDEA-PNVARCIAKARLSGAVVVKLEKKPHPPC--F 79 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-----NGEIIDPYNGLGDL 116 R K+ + PD + DL+ RD T+NA+A GEIIDP G+ D+ Sbjct: 80 RVVDKNNPAESIDVVTLHPDG-IRADLEARDFTVNAMAAALLPGGRIGEIIDPLGGMADM 138 Query: 117 QNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 QNRLLR AF DP+R+LR ARFAA L F I ETL M G L E Sbjct: 139 QNRLLRACSGTAFAADPVRILRAARFAA---TLDFTIFPETLDRMAAAV--GLLTRSAFE 193 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E L + Q+L D GAL VLFPEI A+ G H +D HTL T Sbjct: 194 RITAELFELLACPDALPHIQMLDDIGALDVLFPEIAAMKGCAQNGFHH--LDVWGHTLET 251 Query: 236 LSMAAMLSPQVD----------------------VRFATLCHDLGKGLTP----PELWPR 269 L L + D ++ ATL HD GK + Sbjct: 252 LEHCERLLRRPDVLFTKNAAAFCRSMAGKNRLPVIKLATLLHDAGKPGCKIFDETKNRQV 311 Query: 270 HHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF--PMLNPKTIVKLFDSID 327 +GH G + + R+++ N +L+ H P + P TI + F+++ Sbjct: 312 FYGHDREGETIAGNIAHRMKLSNSDTAFLQLLVRCHMRPMALSRPGVKPATITRWFETVA 371 Query: 328 AWRKPQRVEQLALTSEADVRGRTGFESADYPQGRW--------------LREAWEVAQSV 373 L L + AD+ ++G + + R+ +R + Sbjct: 372 -----DNGLALLLLAAADICAKSGSRADPMEKERFCQWADQTAADYCLRIRPVLGQTDLL 426 Query: 374 PTKAVVEAGFK-GVEIREELTRRRIA 398 + + G G ++ L + R Sbjct: 427 SGADLQDMGMAPGPDMGRVLRKVRQH 452 >UniRef50_C7N4V8 tRNA nucleotidyltransferase/poly(A) polymerase n=2 Tax=Slackia RepID=C7N4V8_SLAHD Length = 467 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 102/428 (23%), Positives = 165/428 (38%), Gaps = 46/428 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHE----- 56 + ++ G VRD L+G D D + + + + D Q + + T Sbjct: 26 EAWVTGSYVRDMLMGRIPHDLD-ISTSARWETIRDLFSSQGFKVYETGTDRGTVTVNTGA 84 Query: 57 ---EYALARTERKSGSGYTGF-------------TCYAAPDVTLEDDLKRRDLTINALAQ 100 E RTE F + ++E DL RRD T+NALA Sbjct: 85 HLVEITTFRTEEPIEGTRIAFQNAEHRKLSVWEPSSRFRFTNSVEKDLLRRDFTMNALAF 144 Query: 101 DDNGEIIDPYNGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETL 157 + N I+DP+ G+ D+ N +R V F +DPLR+LR ARFA++ LGF + T Sbjct: 145 NPNCGILDPFGGVKDISNETIRAVGEPSERFWQDPLRILRAARFASQ---LGFDVESRTK 201 Query: 158 ALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVP 217 + A L+H +R+ E L + + + + V PE + G+ Sbjct: 202 EA--ALASAPLLKHAPAQRIEAEFARLLQGDHARQAI--MDWIDVIGVFIPEALPMKGLD 257 Query: 218 APAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGL---TPPELWPRHHGHG 274 K+H D HT T+S+A Q +R+A HD+GK E GH Sbjct: 258 QRTKYHI-YDVLEHTAYTVSLA---PQQRVLRYAAFLHDIGKPEVFRIDEEGVGHSPGHA 313 Query: 275 PAGVKLVEQLCQRLRV-PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQ 333 AG + EQ+C RL++ +E ++ LV D I P K + +L ++ R+ Sbjct: 314 AAGAVISEQVCSRLKLREDEAAEICTLVGAHDDRISPTPRSVRKALRRLGGNVRMLRELL 373 Query: 334 RVEQLALTSEA--DVRGRTGFESADYPQGRWLREAWE---VAQSVPTKAVVEAGF-KGVE 387 +++ + A E L++ ++ V+ G G Sbjct: 374 ELKKADALAHAPEHQERAAIAEEVGLVLDDVLKKEAAFDIKDLAIDGTDVIARGVPAGPS 433 Query: 388 IREELTRR 395 + L Sbjct: 434 VGAALEAA 441 >UniRef50_C4FTJ0 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FTJ0_9FIRM Length = 416 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 81/292 (27%), Positives = 122/292 (41%), Gaps = 24/292 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFLHPQTHE--E 57 + Y VGG VRDALLG + D D + +TP E+ + VG+ + E E Sbjct: 28 EAYFVGGCVRDALLGKEIHDID-IATSATPDEIQGIFPVTFDVGKKHGTIVVVYKKENYE 86 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RTE + L +D RRD TINALA D G + D + G DLQ Sbjct: 87 ITTFRTEGTYSDRRRPDQVNFVRN--LREDTLRRDFTINALALDRLGRVYDYHGGEQDLQ 144 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++R V F ED LR++R RFA++ LGF I +T + ++ A L +++ Sbjct: 145 AGIIRAVGTAMERFDEDALRMMRALRFASQ---LGFEIESQTFEAIGQL--APNLSYVSI 199 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E + ++ L + G L + V A + W +T + Sbjct: 200 ERIRIELSKLMQGDYLGTSYKALTESGLCAYLL----GMEQVDALSVWQQVYET-----L 250 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQ 286 +AA L+ + + L LG T + R H +K V L + Sbjct: 251 AAQIAAGLARDERLVWWALVKALGLDSTQARAFLRDWKHSNPFIKDVSDLLE 302 >UniRef50_A6CGS1 Metal dependent phosphohydrolase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CGS1_9PLAN Length = 422 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 95/417 (22%), Positives = 157/417 (37%), Gaps = 47/417 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHE 56 + GG VRD LL KD D V + P+E+ ++ VG F V + Sbjct: 22 FQALWAGGCVRDLLLQKEPKDYD-VATNALPEEVRTLFGKRRTLAVGASFGVIIVRGHQP 80 Query: 57 EYALA-RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLG 114 + + T R G G T E+D +RRD TIN + D N + D G Sbjct: 81 DCDVEIATFRSEGPYLDGRRPEHVKFTTAEEDAQRRDFTINGMFYDPINDSLFDYVGGKA 140 Query: 115 DLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL ++R + ED LR+LR RFAA L F++ + T ++ M A ++ Sbjct: 141 DLNQHIIRAIGNPLERMQEDKLRLLRAIRFAA---TLHFQLEESTRQAVQTM--ADQINV 195 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++PER+ E L ++++ G L+ + PE+ L+ + Sbjct: 196 VSPERIADELRKMLIHPARSQAIALVQETGLLKQVLPELAPLWESAGN------RSLWLQ 249 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 TL L + + S + FATL DL L + ++C+RLR Sbjct: 250 TLDRLKLVSTHS--FETAFATLLLDLPASGADQRL------------DEIYEICKRLRFS 295 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 N +L + + + P + + +L D QL AD+ R Sbjct: 296 NHSLNLVHWLVQQRHSLEHAPAMKLSRLKRLLAHEDC-------PQLFELIAADLSSRKQ 348 Query: 352 FESADYPQGRW----LREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVASW 403 ++ RE + +++ G K G + + LT+ + A + Sbjct: 349 PLDDLEFCRQYRDHTPREVLNPPPLISGNDLIDLGIKSGPQFKHLLTQVQDAQLEEL 405 >UniRef50_Q3A9F0 PolyA polymerase/tRNA nucleotidyltransferase family protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A9F0_CARHZ Length = 441 Score = 230 bits (588), Expect = 6e-59, Method: Composition-based stats. Identities = 104/429 (24%), Positives = 163/429 (37%), Gaps = 55/429 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 K Y VGG+VRD LL PVKD D P+E+ + + G +F EE + Sbjct: 15 KTYFVGGSVRDMLLSRPVKDVDL-ATFQKPREVGEKLLKAFGGNF-----FPLKEELLIY 68 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG----EIIDPYNGLGDLQ 117 R K G +LE+DL+RRD T+NALA NG E+ID + G DLQ Sbjct: 69 RLVFKDGGETYQVDILPVFGESLEEDLRRRDFTVNALALPVNGEFPREVIDLFGGRNDLQ 128 Query: 118 NRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 R++R +S EDP+R+LR R A LGF + ET+ + ++ ++ + ER Sbjct: 129 ARIIRMISAENILEDPVRILRGIRLA---GELGFAVEQETMVVFKQYIQ--YIKKMPGER 183 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 V +E + T + +L G V + + + +H H + TL Sbjct: 184 VAEELKKIFTLKPAVPMVDMLFHTGFFEVFNLGLKEGYELYQN--YHHSETVYRHLIDTL 241 Query: 237 SMAAMLS-----------PQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVE 282 + L P ++ HD+GK T E R GH V ++ Sbjct: 242 NRMEELLEDNPLGIRSDYPPYLLKMVAFFHDIGKPGTLSYDKEGRTRFFGHEKESVNRLK 301 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDL---IHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLA 339 L + + + ++ + H + T ++ + I++L + LA Sbjct: 302 PFLDYLNFSHREKRVLTVLIQNHMRLLSLKTAAKVSGEAILRLVHDTGDLFLELILLYLA 361 Query: 340 LTSEA---DVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRR 396 E D+ G + Y + + G G EI + L Sbjct: 362 DKGEKARDDLEFLRGLINFYYGYLEF-----------------KEGLSGKEIMKTLNLPE 404 Query: 397 IAAVASWKE 405 AV K Sbjct: 405 SPAVGHIKN 413 >UniRef50_Q0TV45 PolyA polymerase family protein n=9 Tax=Clostridium perfringens RepID=Q0TV45_CLOP1 Length = 424 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 82/400 (20%), Positives = 154/400 (38%), Gaps = 44/400 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 + ++VGG VRD+LL +D D + + P+++ + + + G Y Sbjct: 21 FEAFIVGGCVRDSLLNKKPQDYD-ITTNAFPEKIEELFDKTIPTGIKHGTVTVLIDKNPY 79 Query: 59 ALARTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 + T R G V+ +E+DL RRD TINA+A D +NG DL+ Sbjct: 80 EV-TTYRVDGEYLNNRKPKDVKFVSNIEEDLSRRDFTINAMAYSPYLGFKDCFNGKDDLK 138 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 N+L+R V F ED LR+LR RF+ + L F+I T +R+ + +++++ Sbjct: 139 NKLIRCVGDPDKRFSEDALRMLRAIRFSCQ---LNFKIEKLTAESIRK--NFKLIKNISM 193 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E + + +P +LR G L E L + + DT Sbjct: 194 ERIQSEFTKIILSNDPDRGLMLLRKLGFSDFLVEEFKNLKLINCYDLYDDIHDTYG---- 249 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + L ++ VR A L + + + V+ + ++L+ N Sbjct: 250 ---LINSLPKKLHVRLAGLFYKV--------------FNSENAVEKCRTILKKLKYDNNT 292 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + + E + I + K + L +S+ + + L ++ + + + Sbjct: 293 INDTCNLVENINNISC--NMTRKKLKLLINSVG----TENIFDLLDLQKSYL---SYMDE 343 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEA-GFKGVEIREELT 393 D L+ + ++ G ++ EL Sbjct: 344 YDTECIDILKNRVSDILASKEPIFIKDLAITGNDLITELN 383 >UniRef50_B6G1N2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1N2_9CLOT Length = 448 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 87/438 (19%), Positives = 166/438 (37%), Gaps = 78/438 (17%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 + + VGG +RD+LLG D D + + P+++++ V G + E Y Sbjct: 23 FEAFAVGGCIRDSLLGRVPNDWD-IATSAKPEDIMNIFENTVETGIEHGTVTVVIDKEPY 81 Query: 59 ALARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 + T R G G +E+DL RRD TINA+A +++ ++D + G DL+ Sbjct: 82 EV-TTYRIDGDYTDGRHPDSVEFTENIEEDLSRRDFTINAMAYNNSTGLVDVFGGRDDLK 140 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 N+++R V F ED LR++R RF+A+ L F I ++T + EM+ + ++ Sbjct: 141 NKVIRCVGDPIKRFEEDALRMMRGIRFSAQ---LEFSIENDTFKAIEEMS--DLISAVSI 195 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E L + ++ + G L+ + E+ + ++ E M Sbjct: 196 ERINVEFTKTLMSDAKKIMI--YHESGILKNILQELYKI----DSEDYNREFSAVEMIKM 249 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 ++ A + + R A + + G++ ++ +++R N+ Sbjct: 250 GVNCADLCKKDLACRLAGFFI---------------YINEAIGLENTRKILKKMRYDNKT 294 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV-------- 346 A + ++ + + K ++ DS++ +E L A+V Sbjct: 295 ISKACELLKYGMRNISNNKEDLKYLLMKLDSVEM------LEDLIDLKAAEVDTYLEERK 348 Query: 347 ---------------RGRTGFESADYPQGRWLREAWEVAQS--------------VPTKA 377 G E+ L + + K Sbjct: 349 SKFEEKSEEEKKIESVGIEVLEAFTVEALIVLNNVENTLKEIVDNGECFRVKDLDINGKD 408 Query: 378 VVEAGFK-GVEIREELTR 394 ++ AG K G EI E L + Sbjct: 409 LIAAGIKPGKEIGEMLNK 426 >UniRef50_Q8RJX5 Polynucleotide adenyltransferase n=1 Tax=Stigmatella aurantiaca RepID=Q8RJX5_STIAU Length = 423 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 100/400 (25%), Positives = 146/400 (36%), Gaps = 55/400 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHE 56 ++LVGG VRD L G+ KD D V + PQE+ A + + + H Sbjct: 27 FAVFLVGGCVRDILRGVAPKDFD-VASSALPQEVQGAFKKVIPTGIQHGTVTVVIGGNHV 85 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG-EIIDPYNGLGD 115 E R+E G + D+T DL RRD TINA+A D G E++DP+ G+ D Sbjct: 86 EVTTFRSEGDYLDGRRPSSVTFERDIT--QDLSRRDFTINAMAYDPLGRELVDPFGGMTD 143 Query: 116 LQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L RL+R V F ED LR LR RFAA LGF + T + + Sbjct: 144 LHARLIRCVRSPIERFSEDGLRPLRAVRFAA---VLGFTLDPATRDAIP--PTLPVFRKV 198 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ERV +E L + ++ +L + G L PE+ + A Sbjct: 199 ALERVREEFVKLLLSPRAELGLSLLVETGLLEAFLPELSSAGDEAAR------------- 245 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 M + +V++R A L DL +G + RL+ P Sbjct: 246 -MARAAVQGAPAEVEIRLAALLADLVRGSQ------------------ARDIALRLKFPT 286 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 ++ D L+ E L P + A P +E L + + V R Sbjct: 287 KVADTVGLLVEHAALEERTEQAEPA-----LRRLLAQVGPALLEPLLAVARSRVEARQPE 341 Query: 353 ESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL 392 + + A+ P E G +I L Sbjct: 342 RLPSVLRLQERLRTLAAAK--PPLTSKELALTGKDIMAAL 379 >UniRef50_Q0AVZ3 tRNA nucleotidyltransferase (CCA-adding enzyme) n=2 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVZ3_SYNWW Length = 437 Score = 227 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 94/411 (22%), Positives = 168/411 (40%), Gaps = 46/411 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 + Y+ G +RD LLG + D + + P + + G F + E+Y + Sbjct: 22 QAYIYGACIRDYLLGKEPINWD-ITTNALPNNTVVIFDENEG-----FTSIPSVEDYGIV 75 Query: 62 RTERKSGSG-----YTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 K S TG A D++ +DL +D T+N++A ++ I+DPYNG+GD+ Sbjct: 76 TLHFKGESCQVNTFRTGEARRFADDIS--EDLLHKDFTMNSIAYNEQAGIVDPYNGVGDI 133 Query: 117 QNRLLRHVSPAF---GEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + RL+R + ED R+LR RF ++ LGF+I E L M+++ + Sbjct: 134 EKRLIRCAQNPYEQMQEDSARILRAVRFESQ---LGFKIEAELLQAMKDLKDTVP---AS 187 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 RV E L + P + L + G L L PE+ G + +H + D H+L Sbjct: 188 GSRVRNEFIQLLLSEQPSRSIRRLLELGLLERLIPELMPAIGFDTHSSYHDK-DVFEHSL 246 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQLCQRLRV 290 + L P + +R A L HD+ K + +GH G ++ + + RL Sbjct: 247 VVLDNT---EPNLTLRLAALLHDIDKPNCLTIDEDGEGHCYGHASGGSEMAQAILGRLNF 303 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 + + + H + F ++ +I +L + P +++L AD++G Sbjct: 304 DRKTIQAVSSLIKEHM--NDFGNISDLSIKRLIRRVG----PDNIDRLFELQLADIKGSA 357 Query: 351 GFESADYPQGRWLREAWEVAQ----------SVPTKAVVEAGF-KGVEIRE 390 + + +EV + ++ G+ G +I E Sbjct: 358 LSSRDPERITKIRNKCFEVLSRREPLTVHDLDISGYDLLSLGYPPGKKIGE 408 >UniRef50_A8S304 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S304_9CLOT Length = 442 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 85/429 (19%), Positives = 154/429 (35%), Gaps = 75/429 (17%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHEE 57 + Y+VGG VRD LLG D D + + P+++ + + + + + E Sbjct: 28 EAYVVGGCVRDMLLGREPGDWD-ITTSALPEQVKEVFRRTVDTGIQHGTVTVMMGKEGYE 86 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 R + + G + PD L +DLKRRD TINA+A + + +D + G+ DL+ Sbjct: 87 VTTYRIDGEYSDGRHPNSVEFTPD--LVEDLKRRDFTINAMAYNSHTGFVDKFGGVEDLE 144 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++R V F ED LR+LR RF+A+ LGF I + T ++ + A + H++ Sbjct: 145 KGIIRCVGEPMDRFTEDALRILRAIRFSAQ---LGFSIEERTYEAIKVI--APNMVHVSK 199 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E L + +P + ++ + G + K+H Sbjct: 200 ERIQVELTKLLLSSHPD-YISLVYETGISPFV------------SEKFHGAYAADSGDWA 246 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 S+ A + +R+A + + + L++ N+ Sbjct: 247 VPSIPAGVPAVKHMRWAAFLREC-------------------SASQAAGILKDLKLDNDT 287 Query: 295 RDLARLVAEF----------------HDLIHTFPML--NPKTIVKLFDSIDAWRKPQRVE 336 R + E+ H + P+ + +P+ + Sbjct: 288 SYRVRTLVEWQGKKVGAEDGEKDCLKHGKEEGMKEIAKQPEPSRASIRRAMSQMEPELFD 347 Query: 337 QLALTSEADVRGRTGFESADYP-QGRWLREAWE--------VAQSVPTKAVVEAGFK-GV 386 L + + + Q R L E +V ++ AG K G Sbjct: 348 DLLTLKMCLSEDASDDRESQWLCQVRDLTEEIRSNRDCISLKTLAVSGHDIMGAGVKPGR 407 Query: 387 EIREELTRR 395 E+ L R Sbjct: 408 EVGNTLARL 416 >UniRef50_C4G3Z5 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G3Z5_ABIDE Length = 403 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 93/402 (23%), Positives = 159/402 (39%), Gaps = 53/402 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYA 59 + Y VGG VRD++L +D D + + P+E+ + G E Y Sbjct: 22 EAYAVGGCVRDSILDRIPEDWD-ITTSAKPEEVKKLFPATIDTGLQHGTVTVVIEKEGYE 80 Query: 60 LARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + T R G G A +L +DLKRRD TINA+A + +ID ++G DL++ Sbjct: 81 V-TTFRLDGDYSDGRHPDRVAFTSSLTEDLKRRDFTINAMAYSEITGLIDRFDGEKDLED 139 Query: 119 RLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 ++R V A F ED LR+LR RFA + L F IA++T +++++ + ++ E Sbjct: 140 GIIRAVGDAEERFSEDALRMLRAIRFAGQ---LNFDIAEKTFDAIKKLS--PNISKVSVE 194 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ KE E L + NP+ + ++ + G V+ PEI ALF ++ + Sbjct: 195 RIAKELEKLLLSGNPE-YIGLVYEAGIFEVIAPEIAALF--DKGEIYNSIKAVSCTSYPE 251 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 + + + G +L +R ++ N+ Sbjct: 252 KKELYQIRTALFL-------------------------ERLGADSAAKLLKRFKLDNDTI 286 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 + + + L+ + + + P E + D S Sbjct: 287 NTVKKLI---GLLQREVEASALEMRRTVKEAGHKIMPLLFEARRAKALTD-------SSK 336 Query: 356 DYPQGRWLREAWEVA-QSVPTKAVVEAGF-KGVEIREELTRR 395 Y E ++A V K ++EAG KG+ I + L R Sbjct: 337 LYENLLVRGECTDIAGLKVNGKDLMEAGIPKGIMIGQTLERL 378 >UniRef50_A4IQ63 CCA-adding enzyme n=11 Tax=Bacillaceae RepID=CCA_GEOTN Length = 404 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 87/307 (28%), Positives = 130/307 (42%), Gaps = 56/307 (18%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHEE 57 + Y VGGAVRD LLG P+ D D + + P E++ + + V +H T E Sbjct: 21 EAYFVGGAVRDLLLGRPIGDVD-IATSALPDEVMAIFPKTIDVGSKHGTVVVVHEGTAYE 79 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RT+ + +LE+DLKRRD T+NA+A D++G IIDP+ G ++ Sbjct: 80 VTTFRTDGDYEDHRRPESVTFVR--SLEEDLKRRDFTMNAIAMDEHGTIIDPFGGQEAIE 137 Query: 118 NRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 RL+R V A F ED LR++R RF ++ LGF +A +T + + +A L H++ Sbjct: 138 KRLIRTVGEADARFREDALRMMRAVRFVSQ---LGFSLAIDTKKAI--IANAPLLAHISV 192 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E E L +L + G L P + Sbjct: 193 ERMTMEMEKLLAGPFAAEALPLLAETG-LSTYLPGLAEKGE------------------W 233 Query: 235 TLSMAAMLSPQVDV---RFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 AA P + R+A LCH L GVK + ++P Sbjct: 234 LRRAAAYRWPWLAAREERWALLCHAL-------------------GVKESRPFLRAWKLP 274 Query: 292 NEIRDLA 298 N++ D A Sbjct: 275 NKVIDEA 281 >UniRef50_UPI00016C045F putative poly(A) polymerase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C045F Length = 409 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 83/407 (20%), Positives = 154/407 (37%), Gaps = 51/407 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHE 56 Y+VGG VRD ++ D D + + P ++ + + + + H Sbjct: 19 FSAYVVGGCVRDMIMKRTPNDWD-ITTSALPADIKKIFERTYDTGIAHGTVTVILNKEHY 77 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E R E++ + A + + DL RRD T+NA+A + +DPY G D+ Sbjct: 78 EVTTYRIEKEYVNFRRPNGVEFAEN--IAQDLSRRDFTMNAIAYHPHKGFVDPYGGRKDI 135 Query: 117 QNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +N+++R V A F ED LR+LR RFAA+ L F IA+ET + L++++ Sbjct: 136 ENKIIRAVGDAKIRFNEDALRILRAVRFAAQ---LNFEIAEETKTAF--IDKRELLKYIS 190 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E + N + L + EI LF ++T + Sbjct: 191 KERIRDEFNKICLSENLFFILNI-YKWDILSYISGEIKKLFD---------NLETEQKLV 240 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 L + A + + R+ L + L V+ + + L+ N+ Sbjct: 241 QLLEVMAAMPVNLISRYTALLYPLND------------------SDAVKHILRELKFDNQ 282 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 L E++ + T ++ + +L + R L ++A + Sbjct: 283 TIKNVALAIEYY-IYETNFKIDAVEMKRLLRICEVDN--VRNILLIKKNKASTIEEIEYI 339 Query: 354 SADYPQGRWLREAWEVAQ----SVPTKAVVEAGF-KGVEIREELTRR 395 + + E E + ++ V++ G EI ++L + Sbjct: 340 EKLFLLIDHILEQKECYKIKDLAITGNDVIKQNIASGKEIGKKLEQA 386 >UniRef50_Q2RZU6 TRNA nucleotidyltransferase/poly(A) polymerase family protein n=32 Tax=Bacteria RepID=Q2RZU6_SALRD Length = 594 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 114/436 (26%), Positives = 170/436 (38%), Gaps = 61/436 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVG-----STPQEMLDAGYQQVGRDFPVFLHPQTH 55 ++ Y VGG VRD LLG D D+V VG + + + +A + +P F Sbjct: 69 IEAYAVGGMVRDVLLGRSTTDLDFVTVGPETGIALAEAVGEALGGRTAHVYPKFGTAAIR 128 Query: 56 E-----------------EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINAL 98 E+ AR E TLEDD RRD T+NA+ Sbjct: 129 IPAADALPDDHPDDALVLEFVAARKESYRSDSRKPEV----EAGTLEDDQYRRDFTVNAM 184 Query: 99 AQ----DDNGEIIDPYNGLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFR 151 A D G ++DP++G DL+ + + + F +DPLR++R ARFA + L FR Sbjct: 185 AIHLTPDRFGALLDPFDGRRDLERQTIDTPLDPADTFEDDPLRMIRAARFATQ---LEFR 241 Query: 152 IADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEID 211 ++D M H E+ L+ ER+ +E L P + F++L G L + PEI Sbjct: 242 VSDRVFDAMGTQAHRVEI--LSQERITEELHKMLEADTPSIGFKILEASGVLAHVMPEIQ 299 Query: 212 ALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQ------VDVRFATLCHDLGKGLT--- 262 L GV D HTL L A + +R+A L HD+ K T Sbjct: 300 RLKGVD-VVNGRDHKDNFYHTLEVLDNVAERTSDRPGAETRWLRWAALLHDIAKPKTKRF 358 Query: 263 PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR-DLARLVAEFHDL--IHTFPMLNPKTI 319 PE HGH G +++ L ++ R+P + R D + + H + + Sbjct: 359 DPEDGWTFHGHEDVGARMIPDLFRKWRLPTDERLDYVQKLVRLHLRPIALADEKVTDSAV 418 Query: 320 VKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVV 379 +L ++ L +DV Y R E ++V K + Sbjct: 419 RRLLYEAG-----DDIDDLMTLVRSDVTSNNPDRRRRYQ--RAFDRVEEKMRAVEEKDRL 471 Query: 380 ---EAGFKGVEIREEL 392 E G EI E L Sbjct: 472 RNFEPPVDGYEIMETL 487 >UniRef50_A4XLP3 tRNA adenylyltransferase n=2 Tax=Clostridia RepID=A4XLP3_CALS8 Length = 394 Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 87/398 (21%), Positives = 152/398 (38%), Gaps = 59/398 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 K YLVGG +RD LLG +D D + + P++++ + + + Sbjct: 20 FKAYLVGGCLRDYLLGTTPQDFD-IATDAKPEDVMKLFEKTIPTGIKHGTVTVIINNVKI 78 Query: 61 ARTERKSGSGYTGFT-CYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 T + Y +L +DLKRRD TINALA + +ID +NGL DL+N+ Sbjct: 79 EVTTFRIEKEYQNHRWPTVEFTDSLYEDLKRRDFTINALAYHPDEGLIDYFNGLDDLKNK 138 Query: 120 LLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 ++R V F ED LR+LR RFA + L F I ++T + + L+ ++ ER Sbjct: 139 IVRCVGNPHERFFEDALRILRCIRFATQ---LNFSIDEKTFEGV--VLLKDLLKKISKER 193 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH-TLMT 235 + E L ++N ++L + G + PE ++ + +H T Sbjct: 194 INAELSKILRSKNSLYGIKLLYESGVGETVIPEYIKIY-------------SFLHSTEFD 240 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 L ++ P F D K VE + + LR + Sbjct: 241 LILSEFKIP----AFFACFRDPKK---------------------VEDIMRDLRFDKKNI 275 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 LA + + + + L K + + P+ + + D +T E Sbjct: 276 ILATKLCNYLNSEYATEYLVKKVY------FEEEKMPEGIISTLSILKKD---KTLMELF 326 Query: 356 DYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELT 393 + + + + + +++ G KG E+ L Sbjct: 327 STLKAQN-KLVSKKDVKIKGDDLLKLGLKGKELGNVLQ 363 >UniRef50_Q67QK4 Putative RNA nucleotidyltransferase n=1 Tax=Symbiobacterium thermophilum RepID=Q67QK4_SYMTH Length = 457 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 95/379 (25%), Positives = 143/379 (37%), Gaps = 35/379 (9%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVG--RDFPVFLHPQTHEEYAL 60 +VGGAVRD LLGL +D D + P E+ + VG R+ L P Y + Sbjct: 45 VVGGAVRDLLLGLVPQDWDL-ATSARPAELQALFPEGRAVGAARETGTLLIPGDGTTYEI 103 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 T ++G LE DL RRD TI+A+A G +IDP G DL + Sbjct: 104 --TPYRAGR--------------LEGDLARRDFTIDAMAATPEGRLIDPLGGRRDLAAGV 147 Query: 121 LRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +R EDPLR+LR R AA+ F + + A L+ + PER+ Sbjct: 148 VRACGRPEDRLAEDPLRMLRAVRLAAQ-----FDLELDPALARAIAALAPRLQAVAPERI 202 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 E L T P Q LR+ G L PE+ + GV ++H H+LM L+ Sbjct: 203 GAEFGRLLVTDRPAWGMQRLRELGLLHQFAPELLEMVGVEQN-RYHA-FPVWEHSLMALA 260 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 + + +GH G +L ++L +RLR N R+ Sbjct: 261 LVPPALHLRLAALLHDVAKPRCLSVDADGERHFYGHEAVGAELADRLLRRLRFDNATREK 320 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY 357 A + H +H + + ++ I + ++ L AD E Sbjct: 321 AVHLVRRHMDLHLDGPVTDAALRRMVRRIGV----EHLDDLVQLRRADRLASGKREGDLG 376 Query: 358 PQGRWLREAWEVAQSVPTK 376 P + + + Sbjct: 377 PDTMAILDGIRRVLAEDAA 395 >UniRef50_Q6AJ41 Related to poly(A) polymerase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ41_DESPS Length = 501 Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats. Identities = 93/409 (22%), Positives = 162/409 (39%), Gaps = 56/409 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 ++++ GG VRD LG KD D V G+ + +Q+G V L E + Sbjct: 46 EVWVAGGPVRDYFLGRSAKDLDL-VTGAGAIDFCRRLLRQLGEGSLVPLSEGDEEACRIV 104 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG------EIIDPYNGLGD 115 + + A +LE+DL RD T+NA+A + ++IDP++G D Sbjct: 105 -----YRHEIVDISSFRASASSLEEDLALRDFTLNAMALPLSTLRGEKVDLIDPFSGRDD 159 Query: 116 LQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 L +++LR + AFG DPLR+LR RF + ++ + + H L + E Sbjct: 160 LADKILRPLPEAFGRDPLRILRAFRFQSLFS---LSFDPAIAPAI--IAHRHLLSGVAAE 214 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E ++ L + + D G L +L PE+ + PA H +D H+L Sbjct: 215 RISAELDATLMGTSALEALAGMEDLGILELLLPELSDGRDILQPAAHH--LDVYGHSLAC 272 Query: 236 LSMAAML---------------------SPQVDVRFATLCHDLGKGLTPP----ELWPRH 270 L ++ + +A L HD+GK + + Sbjct: 273 FEKMHWLLAGGVMSFVSREELDLATLAKKTRLCLCWAALLHDVGKPGSRDIRATDGRITF 332 Query: 271 HGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDL------IHTFPMLNPKTIVKLFD 324 + H G ++V ++ RLR NE++D + H + ++P+ +++L+ Sbjct: 333 YNHDERGARIVAKIGTRLRWSNEVKDAVARLVAMHMHPFHLCAVQQSGEVSPRAVLRLYR 392 Query: 325 SIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSV 373 +P L L + AD G E + + + SV Sbjct: 393 RAQELLQP-----LFLLAFADSLASQG-EGRPAEMEQDIALLYRRTMSV 435 >UniRef50_B0K130 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=10 Tax=Thermoanaerobacterales RepID=B0K130_THEPX Length = 467 Score = 224 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 91/380 (23%), Positives = 157/380 (41%), Gaps = 54/380 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 +Y+VGG +RD +L KD D+VV +++ +++G F F+ + + Sbjct: 17 NLYIVGGYIRDRILNREAKDYDFVVQEDA-EKIAKLVAEKLGGTFVPFMAEKGTYRVVV- 74 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG-----EIIDPYNGLGDL 116 G FT D+ + DL RD T+NA+A IIDP+ G+ D+ Sbjct: 75 ------GDEILDFTNLRGEDIYI--DLAHRDFTMNAMAIKLTDYFEFEYIIDPFGGMTDI 126 Query: 117 QNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +NR ++HV F EDPLR LR RFA Y F I + T A +RE A ++ + PE Sbjct: 127 KNRKIKHVGMMTFKEDPLRALRAVRFAVTYK---FDIDESTKAKIRE--EAELIKQVAPE 181 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E L +N + +++ D + +F E+ + V +H + IH+L T Sbjct: 182 RIMNEIFIILKEKNSHKYLRMMEDLKLMENIFEEVAKMKEV-GKCYYH-LTNAWIHSLKT 239 Query: 236 LSMAAMLSPQV--------------------------DVRFATLCHDLGKG---LTPPEL 266 + + + ++ L HD+GK E Sbjct: 240 VEEYENIINSMRFPKDVYDIVSEYLDRKLSSDNKVKDIIKLGALFHDIGKPESIYIDTEN 299 Query: 267 WPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSI 326 + H G ++V+++ R+++P + L + + +H + + T LF Sbjct: 300 RVHFYNHETKGAEIVKKIASRMKMPKKESSLLKKLVLYHMKPLMYYVNGGPTNKSLFRFF 359 Query: 327 DAWRKPQRVEQLALTSEADV 346 + + L S+AD Sbjct: 360 SELKDDSI--AILLLSQADF 377 >UniRef50_B8DJQ4 Metal dependent phosphohydrolase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJQ4_DESVM Length = 471 Score = 223 bits (569), Expect = 9e-57, Method: Composition-based stats. Identities = 113/384 (29%), Positives = 150/384 (39%), Gaps = 60/384 (15%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM-LDAGYQQVGRDFPVFLHPQTHEEYA 59 MK YLVGGAVRD LLG P+ D D G T + + G ++VGRD V+L Sbjct: 1 MKTYLVGGAVRDLLLGRPIHDYDVAFEGDTACFVRQNPGARKVGRDVDVYLL-------- 52 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 G + TL++DL RD TINALA + G + L DL +R Sbjct: 53 -------DGVEHMPLR------GTLDEDLAARDFTINALALGEAGMLHAHPLALRDLADR 99 Query: 120 LLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 +LR SP A + P+R R A F + +TL MR + G L L E+V Sbjct: 100 VLRPASPTALPDSPVRAFRAA--RFAAQFPDFSVHPQTLEQMRAVAQGGALADLPAEQVC 157 Query: 179 KETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSM 238 +ET AL P + +VL G L F E+ VPA + H + M Sbjct: 158 RETLKALAAPCPGRYLKVLHAGGCLPPWFAELAGAHEVPAGPARYHSGSVLAHVARVMDM 217 Query: 239 AAML--------------------------------SPQVDVRFATLCHDLGKGLTPPEL 266 AA L P V + LCHDLGK T ++ Sbjct: 218 AAALAGHASGAGDGGPSPTGSTMTDSPGAHARPAQQPPPELVTWMALCHDLGKVTTATDV 277 Query: 267 WPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSI 326 P H+GH G L L RL +P + A H + L P T V L ++ Sbjct: 278 LPHHYGHEDRGAPLARALGSRLCMPTRFIEAGEAAARLHMRLARHAELRPGTRVDLLLAL 337 Query: 327 DAWRKPQRVEQLALTSEADVRGRT 350 + + L AD G+ Sbjct: 338 H---TRGLLPAMRLLVLADGTGKG 358 >UniRef50_C7M1E9 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1E9_ACIFD Length = 462 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 103/395 (26%), Positives = 161/395 (40%), Gaps = 35/395 (8%) Query: 3 IYLVGGAVRDALLGLPVK-DRDWVVVGSTPQEMLDA------GYQQVGRDFPVFLHPQTH 55 +YLVGG VRDALLG+ D D +TP+E+++ + G F Sbjct: 27 LYLVGGVVRDALLGIEPNGDVD-ATTDATPEEIVEIVRPVATHFNLTGLRFGTVAFHYHG 85 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ---DDNGEIIDPYNG 112 + T R + L +DL RRD T+NA+A D+ +IDP+ G Sbjct: 86 VPLEV-TTHRGEAYDSSTRKPTVHFVSALAEDLLRRDFTVNAMAVEVTSDDPTLIDPFGG 144 Query: 113 LGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 + DL R LR +F +DPLR+LR ARF AR L + + E+ A L Sbjct: 145 MEDLLARRLRTPMDPRRSFSDDPLRMLRCARFIAR---LDLEPQRALVDAVHEL--APRL 199 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 E ++ ER+ E L +P L D PE+ AL + H + D Sbjct: 200 EVVSRERIRDELSRLLVVPDPSKGLWFLVDTPLAAEFLPELPALR-LEQDPIHHHK-DVL 257 Query: 230 IHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPEL--WPRHHGHGPAGVKLVEQLCQR 287 HT +++ A SP++ +R A L HD+GK T H H G ++ ++ + Sbjct: 258 AHT---IAVTASCSPRLRLRLAALLHDIGKPATREIGPNGVSFHFHDVVGARMARRILRE 314 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPM-LNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 LR PN++ D + E H HT+ + + + + +E L + D Sbjct: 315 LRYPNDLVDDVARLVELHLRFHTYAQGWSDAAVRRYVRDAG-----ELLEDLNELTTCDA 369 Query: 347 RGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEA 381 R + + E A+ + + + A Sbjct: 370 TTRNERRRRMF--AERMATFEERARELAERDALRA 402 >UniRef50_A1HMM1 Polynucleotide adenylyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMM1_9FIRM Length = 302 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 84/255 (32%), Positives = 116/255 (45%), Gaps = 34/255 (13%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ-------VGRDFPVF--LHPQ 53 Y+ GGAVRD + G PV D D + + P+ + + +Q +G ++ V + Sbjct: 23 AYIAGGAVRDLVAGRPVNDYD-IATSARPEAVREIAARQGWQVVDKLGTNYGVVMVVVDG 81 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGL 113 T E A R ER + + A T+ DDL RRD T+NA+A D G IIDP+ G Sbjct: 82 TGVEVATFRGERYGEDSHRPAEVWYAD--TITDDLSRRDFTVNAMAMDVAGNIIDPFGGR 139 Query: 114 GDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 DL RL+R V FGED LR+LR RFAA+ LGF I D TLA + + G + Sbjct: 140 RDLAARLIRTVGDPNRRFGEDALRMLRACRFAAQ---LGFAIDDVTLAAIP--ANLGRMA 194 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALR--------------VLFPEIDALFGV 216 L+ ERV E + L P + L G + PE++ L G+ Sbjct: 195 GLSLERVRLELDKLLLGDYPHLGLAALVATGLAGASCRVKEKGEYQAVAILPELNHLVGL 254 Query: 217 PAPAKWHPEIDTGIH 231 P +H H Sbjct: 255 PQNPAYHAWDGWWQH 269 >UniRef50_Q4K5Y6 Poly(A) polymerase n=49 Tax=cellular organisms RepID=Q4K5Y6_PSEF5 Length = 555 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 90/348 (25%), Positives = 144/348 (41%), Gaps = 38/348 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEML--DAGYQQVGRDFPVFLHPQTHEEYA 59 + YLVGG VRD LL + KD D V +TP+++ + +GR F + E Sbjct: 147 QAYLVGGCVRDMLLNITPKDFD-VATSATPEQVKAEFRNARIIGRRFKLVHIHFGREIIE 205 Query: 60 LARTE------------RKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEI 106 +A +S +G TLE+D +RRD TINAL D + I Sbjct: 206 VATFRANHPQNEDDEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERI 265 Query: 107 IDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREM 163 +D NG+ D++N L+R + + EDP+R+LR RFAA+ L F I T A +RE+ Sbjct: 266 LDYANGVHDIRNNLIRLIGDPRQRYQEDPVRMLRAVRFAAK---LNFGIEKHTAAPIREL 322 Query: 164 THAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFP------EIDALFGVP 217 A L + R+++E + F++L D LFP E + + Sbjct: 323 --APMLREIPSARLFEEVLKLFLSGYAADTFEMLVDLQLFDPLFPASAEALEYNPTYTHT 380 Query: 218 APAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAG 277 ++ D I ++ A + + + L + PP + H Sbjct: 381 LISEALVNTDLRIKQNKPVTPAFLFAALLWPALPARVLRLQERGMPPIPAMQEAAHE--- 437 Query: 278 VKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDS 325 L+ + CQR+ +P + E D+ P + K +L D+ Sbjct: 438 --LIAEQCQRIAIPK---RFTMPIREIWDMQERLPRRSGKRADQLLDN 480 >UniRef50_A6W2I1 Poly(A) polymerase n=6 Tax=Oceanospirillales RepID=A6W2I1_MARMS Length = 484 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 106/411 (25%), Positives = 166/411 (40%), Gaps = 53/411 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFLHPQTHEEY 58 +LVGG VRD L+G+ KD D VV +TP+E+ + + + +GR F + H E Sbjct: 56 FDAFLVGGCVRDHLIGIKPKDFD-VVTNATPEEVHTIFSNSRLIGRRFKLV-HVTFGREI 113 Query: 59 ALARTER---------------------KSGSGYTGFTCYAAPDVTLEDDLKRRDLTINA 97 T R S G +E+D +RRD T NA Sbjct: 114 IEVSTFRANSAQDDSDDDDTQNSSLKGKDSARSAHGIVLRDNVYGNIEEDAERRDFTFNA 173 Query: 98 LAQD-DNGEIIDPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIA 153 L + + I D GL D++N+ +R + A + EDP+R+LR RFA + LGF + Sbjct: 174 LYYNVKDFSIHDYCGGLKDIENKQIRIIGDARQRYQEDPVRMLRAIRFAGK---LGFELE 230 Query: 154 DETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDAL 213 ET A ++EM H L+H+ P R+++E L + N F +LR G R LFP+ DAL Sbjct: 231 AETAAPIKEMAH--LLDHIPPARLFEEVLKLLGSGNGIETFHLLRQYGLFRYLFPDTDAL 288 Query: 214 FGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGH 273 +ID L ++ T + L L P + RH Sbjct: 289 L---QSGWKRNDID---PEAFILQGLKNTDDRIQSGKTTAPYFLYAVLLWPSVALRHEEF 342 Query: 274 GPAGVKLVEQLCQ--RLRVPNEI------RDLARLVAEFHDLIHTFPMLNPKTIVKLFDS 325 G+ L Q + + N++ R + + E D+ + P K L + Sbjct: 343 QAQGMPATPALHQAANMVLDNQVASTAIPRRFSTPMREIWDMQYRLPKRYGKRAFLLLEH 402 Query: 326 IDAWRKPQRVEQLALTSEADVRG----RTGFESADYPQGRWLREAWEVAQS 372 +R + S A++ G F+ Q R L ++ ++ Sbjct: 403 -PRFRAGFDFLLIRELSGANLDGLGDWWEKFQHGTESQQRELIKSIDLFTK 452 >UniRef50_UPI000197324F tRNA nucleotidyltransferase/poly(A) polymerase family protein n=2 Tax=Clostridium RepID=UPI000197324F Length = 430 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 104/407 (25%), Positives = 164/407 (40%), Gaps = 61/407 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHEE 57 + + VGG VRD +L D D + + P E+ + V + E Sbjct: 30 EAFAVGGCVRDTILNRIPGDWD-ITTSAKPVEVKAVFGKTVDTGLQHGTVTVIRDHVGYE 88 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 R + + G D L +DL+RRD TINA+A ++D + G+ DL+ Sbjct: 89 ITTYRIDGEYEDGRHPREVEFTSD--LREDLRRRDFTINAMAYSPETGLVDIFGGMEDLK 146 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 NR +R V FGED LR++R RFA++ L F I +ET + + A L H++ Sbjct: 147 NRTIRCVGNAVERFGEDALRIMRAVRFASQ---LDFSIEEETYRALSGI--APNLAHVSK 201 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E L + PQ V+ D G + P + A F P + ++GI+ Sbjct: 202 ERIQVELTKTLLSGRPQGVL-VMEDTG----MCPYMTAGF----PGIFSKARESGINLEE 252 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 L +A+L + +R+A GH G K + + L++ N+ Sbjct: 253 RLKRSALLPQEKSLRYAV-----------------FLGH--LGEKGACTILRELKLDNDT 293 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIV-------KLFDSIDAWRKPQRVEQLALTSEADVR 347 + + F + T P P LFDS+ RK EQ+ + + R Sbjct: 294 IRRVKTLVRFME--ETLPEDGPALRRMMSQMEDSLFDSLLLMRKTVFPEQMEDVLKTESR 351 Query: 348 GRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELT 393 R E D + + L +V ++ AG K G E+ E L Sbjct: 352 CRRVRERGDCIRLKDL--------AVTGNDLIAAGMKPGKEMGERLR 390 >UniRef50_P0ABF3 Poly(A) polymerase n=179 Tax=Gammaproteobacteria RepID=PCNB_ECO57 Length = 465 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 86/349 (24%), Positives = 141/349 (40%), Gaps = 40/349 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFP------------ 47 + +LVGG VRD LLG KD D V +TP+++ L + VGR F Sbjct: 61 EAWLVGGGVRDLLLGKKPKDFD-VTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIE 119 Query: 48 VFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEI 106 V HE RT S G G ++E+D +RRD TIN+L + + Sbjct: 120 VATFRGHHEGNVSDRTT--SQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTV 177 Query: 107 IDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREM 163 D G+ DL++ ++R + + EDP+R+LR RFAA+ LG RI+ ET + + Sbjct: 178 RDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAK---LGMRISPETAEPIPRL 234 Query: 164 THAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH 223 A L + P R+++E+ L +++L + + LFP I F + Sbjct: 235 --ATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPME 292 Query: 224 -------PEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPA 276 DT IH M ++ A + + + + H A Sbjct: 293 RIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLLETAQKIAQ----ESGLTYHDAFALA 348 Query: 277 GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDS 325 ++++ C+ L +P + L R + + + KL + Sbjct: 349 MNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRA---WKLLEH 394 >UniRef50_C5ESK6 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESK6_9FIRM Length = 448 Score = 220 bits (561), Expect = 8e-56, Method: Composition-based stats. Identities = 94/437 (21%), Positives = 160/437 (36%), Gaps = 74/437 (16%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY- 58 + Y+VGG VRD +LG D D + + P+++ + V G E Y Sbjct: 22 EAYVVGGCVRDMILGREPGDWD-ITTSALPEQVKQVFRRTVDTGIQHGTVTVMMGDEGYE 80 Query: 59 -ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 R + + G + P +L +DLKRRD TINA+A + N ++D + G+ DL Sbjct: 81 VTTYRIDGEYADGRHPDSVTFTP--SLTEDLKRRDFTINAMAYNGNTGLVDEFGGMDDLD 138 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++R V F ED LR+LR RF+A+ LGF I T +R + A + H++ Sbjct: 139 RGIIRCVGEPMDRFSEDALRILRAIRFSAQ---LGFTIEGRTYEAIRAI--APNMVHVSK 193 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLF--------------------------- 207 ER+ E L + NP ++ + G + Sbjct: 194 ERIQVELTKLLLSPNPGH-INMVYETGISPYVSETFHKVYCREEDGGLDEGKQVEREDGQ 252 Query: 208 -PEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPEL 266 PE E + G + ++ A + P +R+A PP+ Sbjct: 253 RPECADRQRPEGENGRQVEREDGKPFFVIPAIPAQVPPVRHMRWAAFLRK-----CPPDE 307 Query: 267 WPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIV-----K 321 R + + L++ N+ + R + + D + +T + Sbjct: 308 AVR--------------ILKDLKLDNDTINRVRTLVSWQDYRLGPDKYSIRTAMSRMEPD 353 Query: 322 LFDSIDAWRK--PQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVV 379 LFD + +R Q + T + + G + +V ++ Sbjct: 354 LFDDLLDFRMCLAQMESEGNKTCQEHLAHTAMLVDEIRRDGDCISL---KTLAVGGNDII 410 Query: 380 EAGFK-GVEIREELTRR 395 +AG K G E+ L R Sbjct: 411 KAGVKPGKEVGLALARL 427 >UniRef50_C8P0Q2 tRNA adenylyltransferase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0Q2_ERYRH Length = 443 Score = 220 bits (560), Expect = 9e-56, Method: Composition-based stats. Identities = 97/415 (23%), Positives = 157/415 (37%), Gaps = 43/415 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ----QVGRDFPV-FLHPQTH 55 ++++VGG VRDAL+G D D + P+++L + G D+ + F+ + H Sbjct: 22 FEVFVVGGFVRDALMGHRSFDIDLC-TNALPEQLLKIYKKYSIESNGHDYGIKFMSGEEH 80 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 E + R E G L DD KRRD T+NAL +ID Y+G+ D Sbjct: 81 FEISTMRLEGDYEDGRRPSRVEFINH--LFDDSKRRDFTVNALYYHPRHGLIDYYDGVKD 138 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 LQN LR + F ED LR+ R+ RF + LGF I ETL +++ T L+ L Sbjct: 139 LQNHTLRVIGDPKVRFKEDVLRIARLYRFKS---ELGFDIDAETLYVVQ--TQIESLQRL 193 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 +++ E L L L LFP + G +H E HT Sbjct: 194 KLVQIYPELSRYLLGPYFLET--SLLCPEFLMTLFPPLKETLGFDQHNPFH-EYSLYEHT 250 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLCQRLR 289 + T+ + +VD++ L HDLGK + + GH A + + L+ Sbjct: 251 IRTMQ---GIPNRVDLKLVALFHDLGKSNVQTVDDQGIAHYPGHAQASCIIARPFFEALQ 307 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 + + HD L + + + + VE L AD + Sbjct: 308 FSIKKIAYLEKLILEHD-------LKLQPVSAQLQQLIRVHGIEWVEDLMAVKRADNLAK 360 Query: 350 TGFESADYPQGRWLREAWEVAQS-----------VPTKAVVEAGFKGVEIREELT 393 + + + + + + + + G +G I + L Sbjct: 361 GSRAQYQLQRCTHISQIIQEIRDQKRPTSIRDLVITASDLKKLGIEGKTINKYLN 415 >UniRef50_B5YFC2 Poly A polymerase, putative n=2 Tax=Dictyoglomus RepID=B5YFC2_DICT6 Length = 469 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 98/421 (23%), Positives = 175/421 (41%), Gaps = 60/421 (14%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALART 63 Y+VGG +RD LLG +D D+++ + + GR EE R Sbjct: 24 YIVGGFIRDYLLGKKPQDIDFLIDPFNIDFIDNLSKILKGR------LVILDEERKYFRI 77 Query: 64 ERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQNRLLR 122 K+ L ++ RRD TIN++ + N EI DP GL DL+ +L+ Sbjct: 78 VVKNKENTFVLDFTPIYQQNLLLEIVRRDFTINSIVLNLRNFEIYDPLKGLKDLERNVLK 137 Query: 123 HVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKET 181 SP + EDPLR+LRV RF A GF+I +R+ ++ L + PER+ +E Sbjct: 138 LSSPDSLKEDPLRILRVFRFGAS----GFKIDKSVFESIRK--NSQRLSKIKPERIHEEL 191 Query: 182 ESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAM 241 L ++ + + LR +FPE+ + +P H + H++ TL + Sbjct: 192 YKILKNPFTSYIWKEMEEYNVLREIFPELSEMKNIPWSEPHHE--NPLEHSITTLYVLEE 249 Query: 242 L---------------------------SPQVDVRFATLCHDLGKGLT---PPELWPRHH 271 L + + ++ A+L HD+GK T ++ Sbjct: 250 LFYNIDKIFPSIKKELEKYFSEKLFSEFTKKETLKLASLLHDIGKSKTYSIDENNLVHYY 309 Query: 272 GHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF-PMLNPKTIVKLFDSIDAWR 330 GH G +++E++ +RL++ N+ + + H + F I KL ++ Sbjct: 310 GHSKVGSEMLEEIAERLKLSNKELSFIQKIIRNHMYLIDFIKNQEINPIHKLISRVN--- 366 Query: 331 KPQRVEQLALTSEADVRG-RTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIR 389 + V L +D + FE+ +Y + + L++ +++ K++ + G EI Sbjct: 367 --EDVPSLIFLFISDQIAIKRTFENKEYFE-KLLQDFFKL------KSIPKPLLSGHEIM 417 Query: 390 E 390 + Sbjct: 418 Q 418 >UniRef50_A6CRX0 tRNA nucleotidyltransferase n=1 Tax=Bacillus sp. SG-1 RepID=A6CRX0_9BACI Length = 395 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 16/218 (7%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHEE 57 + Y VGGAVRD LL P D D + + PQE+ + + V ++ +T E Sbjct: 24 QAYFVGGAVRDLLLNRPTNDID-IATSALPQEVKGVFPKTIDVGIEHGTVVVIYNETPYE 82 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 R+E + + +L++DL+RRD TINA+A D +G I DP+ G D++ Sbjct: 83 ITTFRSEEEYKDHRRPESVTFIK--SLKEDLQRRDFTINAIAMDRSGTIHDPFGGEVDIK 140 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 + +R V F ED LR++R RF A+ LGF++ ++T ++ + L+++ Sbjct: 141 AKTIRTVGSADERFKEDALRMMRAVRFMAQ---LGFKMENDTFESIKR--NGNTLKYIAV 195 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDA 212 ER+ E E L R + F+ L + G + P + A Sbjct: 196 ERLSAEFEKLLGGRFKKASFESLSETGLYQ-FLPGLKA 232 >UniRef50_C4Z1D8 tRNA nucleotidyltransferase (CCA-adding enzyme) n=2 Tax=Bacteria RepID=C4Z1D8_EUBE2 Length = 417 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 91/414 (21%), Positives = 156/414 (37%), Gaps = 64/414 (15%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHE 56 K Y VGG +RD++LG D D + + P ++ + + + +T Sbjct: 25 FKAYAVGGCIRDSILGRNPDDWD-ITTSAVPSQIKTFFKRTVDTGIAHGTVTIMIDKTGY 83 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E R + + G + + L DDL RRD TINA+A +D +D +NGL DL Sbjct: 84 EVTTYRIDGEYEDGRHPKSVEFSDR--LVDDLCRRDFTINAMAYNDTDGFVDEFNGLDDL 141 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +++R V F ED LR++R RF+A+ LGF I + T ++++ A + ++ Sbjct: 142 DAKIIRCVGEPELRFTEDALRMMRAIRFSAQ---LGFTIDEATWNAIKKL--APSISKIS 196 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI-DTGIHT 232 ERV E L + +P Q + G + P ID +++ +I T HT Sbjct: 197 MERVHVELGKTLMSAHPDYVAQ-YSEAGLFEPILPVIDNSL----KSRYKRKILATLQHT 251 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 + +R+A L TP E + + L++ N Sbjct: 252 ----------PDNIYLRYAALF----IASTPDE---------------AAKTLRALKLDN 282 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEA--DVRGRT 350 + D + + + P + + P E + +A D+ G + Sbjct: 283 KTVDTVSKLVKLSKI--DIEETEP-AVRTALNQYGRDFLPLWHELMMAVIQASEDITGIS 339 Query: 351 GFESADY--PQGRWLREAWE-------VAQSVPTKAVVEAGFKGVEIREELTRR 395 + R + A + ++E G +G EI E L Sbjct: 340 NPAKVKHLLTLKRLGTDILARGDCFTIKALDISGNDLIEYGLQGHEIGETLKSL 393 >UniRef50_Q97M87 PolyA polymerase n=1 Tax=Clostridium acetobutylicum RepID=Q97M87_CLOAB Length = 458 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 85/438 (19%), Positives = 170/438 (38%), Gaps = 65/438 (14%) Query: 1 MKIYLVGGAVRDALLGLPVK--DRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEY 58 M+ Y+VGG +RD L+ D D G + + + +++ ++ Sbjct: 17 MEAYIVGGYIRDKLMNPKNSASDLDIAFQGDFEKILDELRKRKI-------KVSSIKKDS 69 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQ 117 ++ R + +DL +RD T+NA+A D N +I+DP++G ++ Sbjct: 70 SVYRITVNG----YCADISKIKGKNINEDLSKRDFTVNAIALDIKNNKIVDPFDGRVHIK 125 Query: 118 NRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 R+L+ + +F +D +R+LR RF +Y G T +R+ H+ + +R Sbjct: 126 RRILQVIDEKSFEDDAVRILRGIRFYIKY---GMHFNGYTEEYIRK--HSKNIMKFPRDR 180 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH-----PEIDTGIH 231 V E + VFF+V+ L+ + P ++ L V K H ++T H Sbjct: 181 VLDEIIHIIHEDENGVFFEVMDQYMILKNILPYMEELKTV-GKCKHHLVDAFTHMNTAYH 239 Query: 232 TLMTLSMAAMLSPQVD----------------VRFATLCHDLGKGLTPPELWPR--HHGH 273 + + ++ + FA HD+GK ++ + + GH Sbjct: 240 VFKDMKKKYLKVKNINIEEFNKDIGVYNELDYLAFAIFTHDIGKYVSYKKEGQKISFKGH 299 Query: 274 GPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTI----VKLFDSIDAW 329 G++++E++C L+ PN+ + + V + H L + F+ D + Sbjct: 300 DEKGLEIIEKVCDELKFPNDGKKIVCSVVKNHMYPLMLFKLKEDERKQEEYEFFNKFDQY 359 Query: 330 RKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREA------------WEVAQSVPTKA 377 V + + S DV T + + + R+ + + + Sbjct: 360 -----VPHIIVASFCDVYATTIYIDENNEKDRFTSFISELVVKYREFINLKKIKYIDGND 414 Query: 378 VVEAGFKGVEIREELTRR 395 +++ GF+G +I L Sbjct: 415 LIDMGFRGNDIGNILNEL 432 >UniRef50_C0ZCG8 Probable tRNA CCA-adding enzyme n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCG8_BREBN Length = 407 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 87/401 (21%), Positives = 151/401 (37%), Gaps = 60/401 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHE---- 56 + Y VGG VRD LL PV D D + + P +++ V E Sbjct: 18 FEAYYVGGCVRDWLLQRPVHDID-ICTNAHPGDVILLFPDHVPTGLKHGTVSVKVEGQLF 76 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE K L DL+RRD T+NA+A D + + DP+ G D+ Sbjct: 77 EVTTFRTEGKYEDYRRPAEVQFV--SELRLDLERRDFTMNAMAMDRHQVLHDPFGGQEDI 134 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 ++RL+R V F ED LR+LR RFA++ LGF I D+T+ M++M A L H+ Sbjct: 135 EHRLVRAVGIPLERFQEDALRLLRGVRFASQ---LGFVIEDQTMLAMKQM--APLLAHIA 189 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ +E L ++ P+V Q+L + + PE++ LF + H Sbjct: 190 VERIREELNKTLDSKAPEVGCQLLNETRLMAYA-PEVEKLFILSN-----------EHAW 237 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 + + + FA ++C+ L++ Sbjct: 238 RLRHLQTVTQKWSLLLFAANY----------------------SPVQAREVCRFLKMSKR 275 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 + + E + P + ++ + E L R Sbjct: 276 ETEAICCLVELLTRLQ--PKWDVPQEIEWGPLLLEVGWDTCNEFFLLLQACWWEER---- 329 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTR 394 Q ++ + +++P K + + G++++ + + Sbjct: 330 -----QSFSMQALLDQYENMPVKTIKDLAITGLDLQVAVQK 365 >UniRef50_A4A0Y5 Poly A polymerase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A0Y5_9PLAN Length = 426 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 100/408 (24%), Positives = 156/408 (38%), Gaps = 46/408 (11%) Query: 7 GGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHEEYALAR 62 GG VRD LLG +D D V + P+ + ++ +G F V + + Sbjct: 31 GGCVRDMLLGRDPQDFD-VATDAPPERVRQIFGEKRTLAIGASFGVITVQGGKKRGQIEV 89 Query: 63 TERKSGSGY-TGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGE-IIDPYNGLGDLQNRL 120 + GY G + E+D KRRD TIN + D + I D G DL++RL Sbjct: 90 ATFRQDVGYSDGRRPDEVRFTSAEEDAKRRDFTINGIFYDPDASAIYDFVGGQIDLRDRL 149 Query: 121 LRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +R + F ED LR+LR RF++ + F + T+ ++ H+ + ++ ERV Sbjct: 150 VRAIGDPNQRFAEDKLRMLRAIRFSSTFQ---FDLEMNTMRAIQR--HSRNIAVVSAERV 204 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 E L + +LRD + PE+ + TL TL Sbjct: 205 AVEMRKMLCSPRRVEAVVLLRDSWLFPTVLPEVITVID---------HAPRWTETLRTLQ 255 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN-EIRD 296 + FAT L + T EL G + L+ ++C+R ++ N E RD Sbjct: 256 FLSGND------FATALAALLRFSTARELAS---GDPRKPIPLLVEVCRRWKLTNDETRD 306 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 + L+ + H L P+ L D R+E+LA + A + R Sbjct: 307 VQWLLRQVHVLQTAKDQSWPRLQRVLVD--------PRIEKLADLASAIAKARMESLEHL 358 Query: 357 YPQGRWLREAWEVAQSVPTK---AVVEAGFK-GVEIREELTRRRIAAV 400 L A E P ++ AG K G + L R A + Sbjct: 359 DFVRERLGWAVERLNPSPVATGDDLIRAGLKPGRHFQGLLESIRDAQL 406 >UniRef50_Q5ZVA2 Poly(A) polymerase I n=4 Tax=Legionella pneumophila RepID=Q5ZVA2_LEGPH Length = 436 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 18/231 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVF--LHPQTHE 56 + Y+VGG+VRD LL KD D + +TP E+ L + +GR F + L + Sbjct: 46 FQAYIVGGSVRDLLLHKAPKDFD-IATNATPNEVKNLFKNARIIGRRFKLVHILFHREII 104 Query: 57 EYALARTERKSGSGY----TGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYN 111 E A R S + + G +L++D RRD TIN+L + + IID Sbjct: 105 EVATFRGHNSSDASHQFNERGMLVRDNVYGSLDEDAWRRDFTINSLYYNISDSSIIDFTG 164 Query: 112 GLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G+ D++ +L+R + + EDP+R+LR RF+A+ L F ++ ET A +++H Sbjct: 165 GVEDVKQKLIRIIGDPVTRYQEDPVRMLRAVRFSAK---LQFNLSPETKAPFPKISH--L 219 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAP 219 + H++ R++ E + ++L + G LFP+ ALF P Sbjct: 220 ITHVSSSRLFDEITKLYQCGEAESVQKLLVEYGLFNYLFPQTAALFDSHYP 270 >UniRef50_A8YV39 CCA-adding enzyme n=19 Tax=Lactobacillus RepID=CCA_LACH4 Length = 399 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 83/408 (20%), Positives = 159/408 (38%), Gaps = 57/408 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 + Y VGG+VRD LL V D D + + P+E+ + + + G E Y Sbjct: 26 FEAYFVGGSVRDLLLDRHVHDVD-ITTSAYPEEVKELFAKSIDTGIRHGTVTVLYGGESY 84 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + +SG + L++DLKRRD TINALA D +G+I+D +NG+ DL+N Sbjct: 85 EITTFRTESGYQDYRRPDHVTFVQNLDEDLKRRDFTINALAMDLHGQIVDLFNGVEDLKN 144 Query: 119 RLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 ++R V F ED LR++R RF ++ L F + ++T +++ + L+ ++ E Sbjct: 145 HIIRAVGDPEKRFHEDALRMMRAVRFTSQ---LKFNLEEKTEQAIKD--NHELLKKISVE 199 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ +E + + FQ+ D + P+ + T +L + Sbjct: 200 RIREEFVKMGIGPHSRQAFQIFLDTQLSEDV-PDFAGKKELLQIYPQLQFSPTLETSLWS 258 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 L + + P + + + + + N + Sbjct: 259 LIIILLKLPD---------------------------------EDISKFMRDWKNSNAMT 285 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 + + +F DLI + + ++ +R + A + G+ A Sbjct: 286 EQVERIIKFFDLISDHTP----------NDYELFQAGERTI-INTIDVAHILGQPVASEA 334 Query: 356 DYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVAS 402 + L ++ + +++ G + G E+ L + R V+S Sbjct: 335 LVDRYLALPIKKPAELAIDGRFLIKHGMRPGAELGHTLNKIRELVVSS 382 >UniRef50_A1UTI1 TRNA-nucleotidyltransferase n=4 Tax=Rhizobiales RepID=A1UTI1_BARBK Length = 417 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 98/408 (24%), Positives = 161/408 (39%), Gaps = 57/408 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT----HEE 57 + +VGGAVR+ LLG P+ D D PQ+++ + + P + T E Sbjct: 31 EARVVGGAVRNQLLGQPISDIDIATT-CLPQQVIKRVEEAGFKAVPTGIDFGTVTVVSES 89 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 + T +S G A + D +RRD TINAL D G++ D GL D+ Sbjct: 90 CSYEVTTLRSDVETDGRYAKVAFGRDWKKDAERRDFTINALYCDATGQLYDLVGGLSDIA 149 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +R +R + ED LR+LR RF A Y + L + L L+ Sbjct: 150 SRTIRFIGVAEQRICEDYLRILRFFRFFAWYGAG----RPDAQGLKACVALKHGLHKLSS 205 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ERVW+E + L +P +R G L ++FPE + G+ A IH+L+ Sbjct: 206 ERVWEEIKKLLAASDPTRALLWMRQSGILTLIFPETEKW-GIDA-----------IHSLV 253 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 +R + L PP+ + ++ + +RLR N+ Sbjct: 254 KTEHVLGWKEDPLLRL--------QSLLPPD------------SERLQDIARRLRFSNKE 293 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG-----R 349 + + E+ +L + + KL I + ++ L+L+ A G Sbjct: 294 K---TRLREWAELESISQNCSETCLQKL---IYFHGRQPILDHLSLSLAAVCAGPVEGNE 347 Query: 350 TGFESADYPQGRWLREAWEV-AQSVPTKAVVEAGF-KGVEIREELTRR 395 + Y + L + WE+ V K ++E GF KG + ++L Sbjct: 348 NSQKIEHYMRLYQLAQRWEIPVFPVSGKDLIERGFAKGKIVGQKLKEL 395 >UniRef50_Q39QS9 Poly(A) polymerase, PcnB n=5 Tax=Desulfuromonadales RepID=Q39QS9_GEOMG Length = 457 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 107/425 (25%), Positives = 156/425 (36%), Gaps = 67/425 (15%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFLHPQTHEEYAL 60 YLVGG VRD LLG KD D V +TP ++ L + VGR F + E + Sbjct: 42 AYLVGGCVRDLLLGREPKDFD-VATNATPNQVKRLFRNCRLVGRRFRLAHIHYQDEIIEV 100 Query: 61 ART------------------ERKSGSGYT-----------GFTCYAAPDVTLEDDLKRR 91 A E G G G T E+D RR Sbjct: 101 ATFRALAPEEPEDTAPAPVSPENVPGEGERPRLPRHVVSDEGMVLRDNVFGTPEEDAVRR 160 Query: 92 DLTINALAQDD-NGEIIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAH 147 D T+NALA + + IID NG+ DL+ ++R + F EDP+R+LR RFAA Sbjct: 161 DFTVNALAYNIADFSIIDYANGMEDLRRGVIRTIGDPLVRFTEDPVRMLRAVRFAA---T 217 Query: 148 LGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLF 207 LGF + D T +RE+ A + T R+++E + + +Q+LR G LF Sbjct: 218 LGFTVEDATWQAIREL--APAITRATAPRLYEEVLKLFLSGEGERVYQLLRQAGLFSHLF 275 Query: 208 PEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELW 267 P A EID H+ + + + +A G+ ++PP L Sbjct: 276 PRFSAWLD--------REIDGFPHSQVGKA----------LEWADDQVGGGEPVSPPLLL 317 Query: 268 PRHHGH--GPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDS 325 G +L + + VP+ + I P + ++ Sbjct: 318 ALMFGEYVEERAAELADA---GMPVPDAVNAAMAGFLGEQAPIIAIPQRIALAVREILLI 374 Query: 326 IDAWRK-PQRVEQ--LALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAG 382 RK P + Q LA + A+ A +G + WE VE Sbjct: 375 QHRLRKIPGKRPQGVLARSCFAEALAYLRCRCAVTGEGGKILAWWERYARESVMPPVEPA 434 Query: 383 FKGVE 387 G E Sbjct: 435 TGGGE 439 >UniRef50_C2E651 tRNA CCA-pyrophosphorylase n=1 Tax=Lactobacillus johnsonii ATCC 33200 RepID=C2E651_LACJO Length = 407 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 99/210 (47%), Gaps = 11/210 (5%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 + Y VGG+VRD LL + D D + + P E+ + V +E + Sbjct: 35 EAYFVGGSVRDLLLNRHIHDVD-IATSAYPMEIKQIFKKTVDTGIKHGTVTVLYEGESYE 93 Query: 62 RTERKSGSGYTGFTC--YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 T ++ SGY F + L +DLKRRD TINALA D +G IID ++GLGDL+ Sbjct: 94 ITTFRTESGYQDFRRPDHVTFVQNLSEDLKRRDFTINALAMDVDGNIIDHFDGLGDLEKH 153 Query: 120 LLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 L+R V A F ED LR++R RF ++ L F + ET + + + L ++ ER Sbjct: 154 LIRAVGKAENRFHEDALRMMRAVRFMSQ---LQFTLEPETEQAISD--NHELLSKISVER 208 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVL 206 + E Q FQ+ D G + Sbjct: 209 IRDEFVKMGIALGSQKAFQIFLDTGLSEEV 238 >UniRef50_A8GIZ2 Poly(A) polymerase n=61 Tax=Gammaproteobacteria RepID=A8GIZ2_SERP5 Length = 505 Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 81/344 (23%), Positives = 138/344 (40%), Gaps = 31/344 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFP----------- 47 + YLVGG VRD LLG KD D + +TP+++ L + VGR F Sbjct: 98 FEAYLVGGGVRDLLLGKKPKDFD-ITTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEII 156 Query: 48 -VFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGE 105 V HE+ + S G ++E+D +RRD TIN+L + Sbjct: 157 EVATFRGHHEQQTPESDKNSSQQAQNGMLLRDNIFGSIEEDAQRRDFTINSLYYGVADFT 216 Query: 106 IIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMRE 162 + D +GL DL+ ++R + + EDP+R+LR RFAA+ L I+DET + Sbjct: 217 LRDYVDGLRDLKQGVIRLIGDPETRYREDPVRMLRAVRFAAK---LDMTISDETAEPIPR 273 Query: 163 MTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKW 222 + A L + P R+++E+ L + L + + LFP+I F Sbjct: 274 L--ASLLHEIPPARLFEESLKLLQAGYGYPTYLKLCEYQLFQPLFPQIARHFTPGQDTPM 331 Query: 223 HPEI-DTGIHTLMTLSMAAMLSPQVDVRFATLCH----DLGKGLTPPELWPRHHGHGPAG 277 + +T L ++P FA + + + L + A Sbjct: 332 ERILAQVLKNTDYRLQNNMRVNPAFL--FAAMLWYPLLEHAQKLAQESGLAYYDAFALAM 389 Query: 278 VKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK 321 ++++ C+ L +P I L R + + + +++ Sbjct: 390 NDVLDEQCRSLAIPKRITTLVRDIWQLQLRLSRRQGKRAHKLME 433 >UniRef50_Q043S5 CCA-adding enzyme n=7 Tax=Lactobacillus RepID=CCA_LACGA Length = 398 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 11/210 (5%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 + Y VGG+VRD LL + D D + + P E+ + + +E + Sbjct: 26 EAYFVGGSVRDLLLNRHIHDVD-IATSAYPMEIKQIFKKTIDTGIKHGTVTVLYEGESYE 84 Query: 62 RTERKSGSGYTGFTC--YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 T ++ SGY F + L +DLKRRD TINALA +G +ID ++GLGDL Sbjct: 85 ITTFRTESGYQDFRRPDHVTFVQNLSEDLKRRDFTINALAMGVDGNVIDHFDGLGDLDKH 144 Query: 120 LLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 L+R V A F ED LR++R RF ++ L F + ET + + + L ++ ER Sbjct: 145 LIRAVGKAENRFHEDALRMMRAVRFMSQ---LQFTLEPETERAISD--NHELLSKISVER 199 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVL 206 + E Q FQ+ D G + Sbjct: 200 IRDEFVKMGIAPGSQKAFQIFLDTGLSEEV 229 >UniRef50_C7H286 Metal dependent phosphohydrolase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H286_9FIRM Length = 464 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 79/308 (25%), Positives = 116/308 (37%), Gaps = 50/308 (16%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTH--E 56 Y VGG VRD+LLGL D D + P++++ ++ G Q Sbjct: 24 AYAVGGCVRDSLLGLDPHDWDLC-TSARPEQVMALFGEEKCIPTGLQHGTVTVKQGGRLY 82 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE G P+V +DL RRD TINA+A +IDP+ G DL Sbjct: 83 ETTTFRTEGAYSDGRHPDAVCFVPEV--REDLARRDFTINAMAYSAEEGLIDPFGGRDDL 140 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +R V F ED LR+LR+ RFAAR+ GF I T R + L+ ++ Sbjct: 141 AAHRVRAVGEPERRFEEDALRILRLYRFAARF---GFAIDPATGVAARAL--GPHLDCVS 195 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ +E L P + + L V+ PE++ P + Sbjct: 196 AERIQEELLKLLAAPRPGSYL----EPAVLAVILPELEP---EKQPER-------FAELC 241 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 T+ V R A L LG+ + ++L+ N Sbjct: 242 RTIDRIEPTVENVPARLAALLCPLGEAG-------------------ARKALRKLKCSNA 282 Query: 294 IRDLARLV 301 + D + Sbjct: 283 LTDEVTAL 290 >UniRef50_A6NVT9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVT9_9BACE Length = 392 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 75/229 (32%), Positives = 106/229 (46%), Gaps = 17/229 (7%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 + Y VGG VRD LLG D D V + P+E++ + V E+ + Sbjct: 26 EAYPVGGCVRDLLLGRTPGDWD-VTTSAMPEEVIALFDRTVPTGIRHGTVTVLTEDGGVE 84 Query: 62 RTERKSGSGYTG--FTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 T ++ SGY L DL RRD TINA+A +G +IDP+ G DLQ R Sbjct: 85 VTTFRAESGYADGRHPDAVTFGGDLTGDLTRRDFTINAMALGPDGAVIDPFGGQKDLQAR 144 Query: 120 LLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 L+R V F ED LR+LR RF+A+ LGF + + T +R+ +A L+ ER Sbjct: 145 LIRCVGEPGRRFREDALRMLRAVRFSAQ---LGFAVENATAEALRD--NAELTACLSAER 199 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLF-----PEIDALFGVPAPA 220 + E E L ++ P+ + L G L P++ L VPA Sbjct: 200 IRTELEKILLSQWPERG-EGLFAWGLLAAFVGADAQPDLTTLHRVPARP 247 >UniRef50_A4BLN3 PolyA polymerase n=2 Tax=Gammaproteobacteria RepID=A4BLN3_9GAMM Length = 475 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 94/350 (26%), Positives = 138/350 (39%), Gaps = 46/350 (13%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFP--VFLHPQTHEEY 58 YLVGG VRD LG KD D V + P+++ L + +GR F E Sbjct: 84 AYLVGGGVRDLSLGREPKDFD-VATDARPEQVKQLFRNCRLIGRRFRLAHVYFGSEIIEV 142 Query: 59 ALARTERKSGSG-------YTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPY 110 A R +++G G T+E+D RRD T+NAL + ++D Sbjct: 143 ATFRALQEAGEADEQARVLENGRLLRDNVFGTIEEDALRRDFTVNALYYHIADFTLVDYV 202 Query: 111 NGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 G+ DL+ +LR + A + EDP+R+LR RFA + LGFR+ ET + M H Sbjct: 203 GGMADLRCGVLRLIGAAEVRYREDPVRMLRAVRFAVK---LGFRMHPETAEAIPRMAH-- 257 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFP---------EIDALFGVPA 218 L H+ P R++ ET T F+ LR G LFP E A G A Sbjct: 258 LLGHIPPARLFDETLKLFVTGMGLEAFECLRHYGLFGYLFPATEAVLSGDEFGAALGFLA 317 Query: 219 P--AKWHPEIDTGIHTLMTLSMAAMLSPQVDVRF-ATLCHDLGKGLTPPELWPRHHGHGP 275 A + G AA+L P + RF A H +G E Sbjct: 318 RALADTDRRVAEGKSVTPAFLFAALLWPSIAQRFTAAEPHAVGSIQEIQEAAG------- 370 Query: 276 AGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDS 325 ++++ + + +P + + E L F K ++L Sbjct: 371 ---EILQDQTRCVSIPK---RFSIPMREIWSLQPRFERRTGKRALRLLSH 414 >UniRef50_A0Q3L3 PolyA polymerase family protein n=2 Tax=Clostridium RepID=A0Q3L3_CLONN Length = 457 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 103/438 (23%), Positives = 168/438 (38%), Gaps = 70/438 (15%) Query: 2 KIYLVGGAVRDALLGLP--VKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYA 59 ++Y++GG +RD LL KD D + G +FL T + + Sbjct: 18 EVYIIGGYIRDKLLNTKEASKDLDIIYNGD----------------IKLFLDKLTMDGFH 61 Query: 60 LARTERKSGSGY---TGFTCYAA--PDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGL 113 + + + T A ++E+DL +RD TINA+A + +IIDP+NG Sbjct: 62 IVTLKDEQQIYRAILNDITVDIALIKGESIEEDLSKRDFTINAIALKLIDNKIIDPFNGR 121 Query: 114 GDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L +L+ V+ + +D +R+LR RFA +Y G + E + + H + Sbjct: 122 RHLNAKLIHTVNENSISDDSVRILRAYRFAIKY---GMHFSKECEKQIIDNKH--NIMKF 176 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH- 231 ER++ E + F+ L G L+ L P ID L V K+H E D H Sbjct: 177 PKERIFNEFMQIIKCDKFGRAFEELDTLGVLKNLLPYIDELKTV-GRCKYHIE-DAFTHM 234 Query: 232 TLMTLSMAAMLSPQVDVR---------------------FATLCHDLGKGLTPPELWPR- 269 L+ + A+L+ ++ + FA CHD+GK + E R Sbjct: 235 NLVYKNSKALLNGELFIEGLELNIFNNNIGEFLISEYFSFAAFCHDIGKFVCHREKDGRV 294 Query: 270 -HHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDA 328 GH G K++ +C + P E + + E H N K K F Sbjct: 295 SFIGHDKEGAKIMMDICNKFGFPKEAKKFICSLIEAHMYPLGLCKNNVKNYKKSFYKF-F 353 Query: 329 WRKPQRVEQLALTSEADVRGRTGFESADYPQ---GRWLREAWEVAQS---------VPTK 376 R + VE + S D+ + + +L ++ + K Sbjct: 354 LRYNKYVEYILALSFCDMHATKMLYDPNNEEKIFKSFLERLYKEYNEFKDAINSDWIDGK 413 Query: 377 AVVE-AGFKGVEIREELT 393 V+E G +G EI+ L Sbjct: 414 LVIELTGAEGEEIKTILN 431 >UniRef50_A8Z5W3 tRNA nucleotidyltransferase n=2 Tax=Candidatus Sulcia muelleri RepID=A8Z5W3_SULMW Length = 445 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 86/370 (23%), Positives = 152/370 (41%), Gaps = 39/370 (10%) Query: 2 KIYLVGGAVRDALLGLPV-KDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 K Y+VGG VRD L+G V K V VG + + +++ + + Sbjct: 25 KSYVVGGYVRDFLIGKNVCKKVYIVTVGDCIK-LAKKVCEKLDHKHKINIFKYFGTAII- 82 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDPYNGLGDL 116 K + F A +L++ K+ D TIN LA N G++IDP+ GL D+ Sbjct: 83 -----KYNNLNIEF-FSANKRCSLKEFKKKIDFTINTLAISLNNLNYGKLIDPFGGLFDI 136 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 ++ ++ D LR++R RF Y F+I + ++ +M+ L+ ER Sbjct: 137 MKNKIKSTIDSY--DSLRMIRAIRF---YNEFNFQIDNLSIQIMKI---------LSIER 182 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + E L + P L G L ++ PE+ L G+ K+ + D IHTL + Sbjct: 183 ILYEFNKILLSNKPSTGIFYLYKIGLLSIILPELINLKGIENKKKFKHK-DNFIHTLEVV 241 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 ++ + + + +A L HD+GK +T P H H G K++ + +RL++P + Sbjct: 242 DNISIYTNNIWLIWAALLHDIGKSITKKYIPNFGWTFHSHELIGSKMITSIFERLKLPKK 301 Query: 294 IRDLARLVAEFHD---LIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 + + +I +L I +E L L ++D+ + Sbjct: 302 KYIKYVKKIIKYSSRPITLISYTATDSSIRRLLFYIG-----DDIEDLILMCKSDITTKN 356 Query: 351 GFESADYPQG 360 + Y + Sbjct: 357 YIKKIQYKKN 366 >UniRef50_B2S2L8 Polynucleotide adenylyltransferase n=2 Tax=Treponema pallidum RepID=B2S2L8_TREPS Length = 478 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 97/432 (22%), Positives = 149/432 (34%), Gaps = 46/432 (10%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 IY+VGGAVRD LL D D + P+ + + V +++ Sbjct: 24 IYVVGGAVRDFLLNRSAHDWDL-ATDAPPERVRMLFRRTVPTGIEHGTVTILFRGHSIEC 82 Query: 63 TERKSGSGYTGFT--CYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNR 119 T + S Y+ +EDDL RRD T+NA A +GEIID G DL+N Sbjct: 83 TTFRVESDYSDRRHPDSVCFAARIEDDLARRDFTVNAFAAALPSGEIIDVCGGYADLRNG 142 Query: 120 LLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 L+ V A F ED LR LR RFAA+ L F I T + + ++ ER Sbjct: 143 LICSVGDAHARFSEDALRPLRAVRFAAQ---LSFSIEARTREAI--IALRAHTARISRER 197 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH----------PEI 226 V E L T P + +++ + G L LFP + + G + Sbjct: 198 VRDELSKMLCTPRPSIALRLMEETGLLHTLFPALAQVCGRNEGEEKETQDSLQVSPQQRR 257 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT-PPELWPRHHGHGPAGVKLVEQLC 285 D + + ++ VR A L L T P P + +L Sbjct: 258 DARTFAACAFAACDRVPAELAVRLAALLFPLAHYRTLPASGTGAALFICPPALAEARELL 317 Query: 286 QRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKL--------------FDSIDAWRK 331 + L+ PN + + H + T+ + Sbjct: 318 RGLKYPNYLTAQVCHLVA-HARFTPHECWSEGTLRRFVVTVGTTQLESLCVLRRAYLADD 376 Query: 332 PQRV-EQLALTSEADVRGRTGFESADYPQGRWLREAWEVA------QSVPTKAVVEAGF- 383 R+ Q ++ E G+ E + R R A ++ +V + ++ G Sbjct: 377 DYRISAQPGVSCENAREGKKMQEQFEIFVTRVRRVAAQLPVHGIRDLAVNGRDLIAQGIP 436 Query: 384 KGVEIREELTRR 395 G I L Sbjct: 437 PGPTIGHILNAL 448 >UniRef50_Q5E2T5 Poly(A) polymerase I n=6 Tax=Gammaproteobacteria RepID=Q5E2T5_VIBF1 Length = 475 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 79/335 (23%), Positives = 136/335 (40%), Gaps = 28/335 (8%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFP--VFLHPQTHEEY 58 YLVGG VRD LLG KD D + +TP+++ L + +GR F L + E Sbjct: 70 AYLVGGGVRDILLGQEPKDFD-IATNATPEQIKKLFRNCRLIGRRFRLAHILFGRDVIEV 128 Query: 59 ALARTERKSGSGYT--------GFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDP 109 A R K + G T+E+D +RRD T+NA+ + + I D Sbjct: 129 ATFRGHHKEDNEKKNISAQSDEGMLLRDNVYGTVEEDAERRDFTVNAMYYNIADYSIHDY 188 Query: 110 YNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 NG+ DL+N ++R + + EDP+R+LR RFAA+ L I D+T A + E++ Sbjct: 189 ANGIEDLKNGIIRLIGDPETRYREDPVRMLRAVRFAAK---LDMTICDKTAAPIAELS-- 243 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 L + R+++E+ L T N + +LRD + LFP + + I Sbjct: 244 PLLRDIPAARLFEESLKLLQTGNGLNTYWMLRDFNLFQQLFPVLTPFLTEEGNSPAEQMI 303 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCHDL--GKGLTPPELWPRHHGHG---PAGVKLV 281 + + + + + FA + K + P+ + A ++ Sbjct: 304 ELVLRS-TDKRINSGKRVNPAFMFAAMLWYPLTAKAQEIQDDNPKFDHYESIMEASNLIL 362 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNP 316 + + +P + R + + + Sbjct: 363 DTQVRSTAIPRRLTATIRDIWQLQLRLPRRTGKRA 397 >UniRef50_C7LTC9 Poly(A) polymerase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTC9_DESBD Length = 424 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 93/365 (25%), Positives = 146/365 (40%), Gaps = 36/365 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFLHPQTHEEY 58 YLVGG VRD LLG KD D V +TP ++ + Y +GR F + H + + Sbjct: 34 FTAYLVGGGVRDLLLGRTPKDFD-VSTNATPSQIKKIFQNYFLIGRRFRL-AHIRFDDHV 91 Query: 59 ALARTERK------SGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYN 111 T R+ + T E+D RRD TIN L + + IID Sbjct: 92 IETSTFRRCPDQEEENGDEDLYMLRDNCYGTPEEDALRRDFTINGLFYEVERFSIIDHVG 151 Query: 112 GLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 GL D++NRL+R + F EDP+R++R RFAAR L F I T + M H E Sbjct: 152 GLSDIENRLIRCIGDPNIRFREDPVRMIRAVRFAAR---LDFHIEPATYNAI--MRHHEE 206 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAK-----WH 223 + +P RV++E + + + ++L G L L PEI W Sbjct: 207 ILKASPPRVFEELQKLFAYGSGEKAVRLLYKTGLLHNLLPEIADFLDHDHGQDSILWTWL 266 Query: 224 PEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPP-ELWPRHHGHGPAGVKLVE 282 +D I T+ + + + FA L + + E + L++ Sbjct: 267 EHLDRRIRTVGKV--------EPVLVFAALFSAPVRHIAARYEADGERVVYNAMLEDLLQ 318 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQL-ALT 341 +C R+ +P + + P + + F + + + + + QL L Sbjct: 319 PICVRMSMPKWMCSRMIQIMANQTRFE--PDKKKRFSKRGFVAHECFPETLALYQLGLLV 376 Query: 342 SEADV 346 S AD+ Sbjct: 377 SGADL 381 >UniRef50_Q31FF3 Poly(A) polymerase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FF3_THICR Length = 484 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 81/348 (23%), Positives = 135/348 (38%), Gaps = 38/348 (10%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQE---MLDAGYQQVGRDFPVFLHPQTHEEYA 59 YLVGG VRD LLGL KD D VV + P++ + + + +GR F + H Sbjct: 62 AYLVGGGVRDILLGLEPKDFD-VVTNAEPEQIKGVFKSRCRLIGRRFRL-AHVYFGRNVV 119 Query: 60 LARTERKSGSGY------------------TGFTCYAAPDVTLEDDLKRRDLTINALAQD 101 T R G G TG ++E+D+ RRD TIN+L + Sbjct: 120 EVATFRGDGDGQKSAGRSRKQVNHTRAVDDTGRLVRDNVYGSIEEDVWRRDFTINSLYYN 179 Query: 102 D-NGEIIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETL 157 + ++D G+ D++ LR + + EDP+R++R RFAA+ LGF I T Sbjct: 180 IRDFSVLDYTGGMEDIEKGQLRLIGDPEMRYREDPVRMIRAIRFAAK---LGFEIEPNTK 236 Query: 158 ALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVP 217 A + E+ H L+ ++ R+++E + F+ LR G LFP+ L + Sbjct: 237 APIYELAH--LLKDVSHARMFEEVLKLFHSGVAIEVFEKLRHFGLFTFLFPQTHHLLSME 294 Query: 218 APA-KWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHG-- 274 + I+ T + ++P FA + + L Sbjct: 295 SEGFPRMLVIEALKSTDARIQSNKGVNPSFL--FAAMLWEPMLQRMEQHLAEDFSRQDAM 352 Query: 275 -PAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK 321 A ++EQ +P + + + P+ + + Sbjct: 353 FAAANDVIEQQIYSTSIPKRFTAQIKDIWSLQFRLLNRQGNRPQKLFE 400 >UniRef50_UPI0001C30E56 polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30E56 Length = 479 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 119/436 (27%), Positives = 170/436 (38%), Gaps = 64/436 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 + +LVGGAVRD LL KD D V G G FP+ E + Sbjct: 26 RTWLVGGAVRDRLLDRVTKDLDLAVDGDVEAAARGLGRAARAAVFPL------SEAFGAW 79 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG-EIIDPYNGLGDLQNRL 120 R + G+ T+E DL +RD T+NA+A+ G + IDP G DL R Sbjct: 80 RVVAREGAWQADLAPLT--GATIEQDLAQRDFTVNAIAEPLAGGDPIDPTGGAADLAARR 137 Query: 121 LRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 LR VSP AF DP+RV+R+ RFA+ LG + TLA R A L + ERV+ Sbjct: 138 LRMVSPGAFSADPVRVMRLPRFAS---ELGLEVEVGTLAAAR--LDAPRLREVAQERVFA 192 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMA 239 E + +P +++ GA + PE+DAL GV A H +D HTL L+ Sbjct: 193 ELRRVVGAPDPLHGLELMGQLGATAAVLPELDALRGVEQSAYHH--LDVHDHTLAVLAET 250 Query: 240 AMLSPQVD----------------------------VRFATLCHDLGKGLTP---PELWP 268 L +RF L HD+ K T Sbjct: 251 VALEGDPAAVFGPERGERLRELLAQPFSDELSRGTALRFGALLHDIAKPQTRGVMESGRV 310 Query: 269 RHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDA 328 H G +L ++ RLR ++R +A H + P T Sbjct: 311 TFFDHDAQGAELTREILTRLRTSEKLRAHVAALARHHLRLGFLVHERPLTRRD---EHRY 367 Query: 329 WRKPQRVE-QLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVV-EAG---- 382 R+ VE + L S AD G +S + + ++A+ + A+ E+G Sbjct: 368 LRRTTPVEVDVTLLSVADRLATRGRKSD-----EAIAKHLDLARELIGPALAWESGERPL 422 Query: 383 --FKGVEIREELTRRR 396 +G E+ + L R Sbjct: 423 PLIRGDELADALEIPR 438 >UniRef50_C0QG74 tRNA nucleotidyltransferase/poly(A) polymerase n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QG74_DESAH Length = 435 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 90/370 (24%), Positives = 153/370 (41%), Gaps = 40/370 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY----QQVGRDFPVFLHPQTHEE 57 + ++ GGAVRD + GLP D D +V ++ + + + VG+ F V L E Sbjct: 22 RAFIAGGAVRDMVAGLPPADFD-IVTDASLETIKQTFKNQRVKIVGKSFHVCLVNG--IE 78 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDL 116 A R +R DL++RD TIN++A D +I DP++G DL Sbjct: 79 VASFRGDRTKFPL---------------ADLEQRDFTINSMAWDPVTRQIFDPFSGEQDL 123 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + ++++ EDPLR++R RF ++ +G +A ETL ++ ++ Sbjct: 124 KRKIIQFTGNGPLRIREDPLRMVRACRFVSQ---IGGTLAPETLGDIKTHGRLVG-ANVA 179 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E A+ P +FF+ L+ G L +FP +D L + +H E H++ Sbjct: 180 KERIRMEILKAMAHDRPSLFFRSLQATGLLIQIFPCLDRLVDLDG-GPFHGET-VFEHSM 237 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLT--PPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 M A+ + +R A HD GK T E HGH A K+ E L+ Sbjct: 238 MVGD--ALSPKRPLLRLAGFLHDAGKFDTAAIKEGNLTFHGHEKARDKI-EADLVNLKFS 294 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 R + + H P+ + ++ +++ ++ AD R Sbjct: 295 TRERRYILSIIDVHMR-PLTEKTTPRAVRRILALLESH--GVSYQEFMRMRIADKRSNLA 351 Query: 352 FESADYPQGR 361 + + R Sbjct: 352 KQPYTLGEIR 361 >UniRef50_C7LX86 tRNA adenylyltransferase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LX86_DESBD Length = 367 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 117/351 (33%), Positives = 158/351 (45%), Gaps = 32/351 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQVGRDFPVFLHPQTHEEY 58 MKIYLVGGAVRD + G D D+V +G +E+ G +VG+ PVF+ Sbjct: 1 MKIYLVGGAVRDQVRGQEPVDLDFVAIGGDERELRQRVPGLTRVGQGIPVFV-------- 52 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + ++EDDL RDLTINALA+D++GEI+ L DL Sbjct: 53 ------------RGSRQYTLSDFSSIEDDLCSRDLTINALARDESGEIVAHPRALSDLHE 100 Query: 119 RLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 ++LR V+PA F DPLR +R A A F + + + MR +T L + ERV Sbjct: 101 KILRPVAPANFLADPLRAIRAA--RFAAAFPDFAVHAQLVEAMRGVT-VEALAQVAAERV 157 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 +E A P F +VL+ L E +PA + HT + Sbjct: 158 GQEVLKACAASVPGNFLRVLQAGDKLAPWLAEFRDAHAIPAGPPRFHDASVLEHTARVMD 217 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 A V + LCHDLGK +T PEL P HHGH G + + L +RLR+PN Sbjct: 218 RCAGDGLGV---WMALCHDLGKTVTAPELLPHHHGHEAVGPDMAQSLARRLRLPNRHGAA 274 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 RL A +H + L P T V+L +D K +E AD G Sbjct: 275 GRLAARWHMAAGCYDGLKPSTRVRLLLELD---KAGIMESFFRMVAADQGG 322 >UniRef50_B2A4Y6 CBS domain containing protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4Y6_NATTJ Length = 890 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 90/415 (21%), Positives = 162/415 (39%), Gaps = 53/415 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVF---------LH 51 K+Y VGG +RD LLG D D V+ + + D F L Sbjct: 487 FKVYGVGGFIRDLLLGKDNLDIDLVIEQDAIS-FAKLVSKHLNGDLKTFSQFQTARLTLR 545 Query: 52 PQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEII 107 T ++A AR E + + + T++ DL RRD TIN LA + N G+++ Sbjct: 546 SGTRIDFATARIEYYAFPAASPEV----EESTIKQDLYRRDFTINTLAVELNCNSFGKLL 601 Query: 108 DPYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 D + G DL+ ++R + + +F EDP R+ R RF +R+ F I ++TL ++ Sbjct: 602 DFFGGTKDLKKGVIRVLYNLSFVEDPTRIFRAIRFESRF---NFNIEEQTLIFIKNSLET 658 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 G L+ L ER+++E + + F+ + + G +FP ++ + +I Sbjct: 659 GVLDKLPGERLYEELRNIVDEDEAVNTFRRMDELGIFTKIFPNLNVSQDKLVKLQNIYDI 718 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQ 286 +S + V F+ L D + ++ + + Sbjct: 719 LNWYERENKQKQEKFVSKEAMV-FSCLLQD-------------------QPLPIISSILE 758 Query: 287 RLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 RL+VP +IRD+ + + + + K +L +++ + + L AD Sbjct: 759 RLKVPQKIRDVIITTVKETESLSSKLEYTEKN-SELVQNLE-----EIPLETILFVLADK 812 Query: 347 RGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAV 400 + Y +L E S+ + + G K G + L R A + Sbjct: 813 ENQKIKNKIYY----YLEELIGAGVSITGEDLKTLGIKPGPVYKTALEEVRKARL 863 >UniRef50_Q1WU19 CCA-adding enzyme n=30 Tax=Lactobacillales RepID=CCA_LACS1 Length = 404 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 106/212 (50%), Gaps = 15/212 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHE 56 + Y VGG+VRD LLGLP+ D D + + P+E+ + V + L T Sbjct: 25 FEAYFVGGSVRDTLLGLPIHDVD-IASSAYPEEIKQIFSKTVDTGVEHGTVMVLDHGTGY 83 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE +LE+DLKRRDLTINALA DD G+IID ++GL DL Sbjct: 84 EITTFRTESTYQDYRRPDKVEFVR--SLEEDLKRRDLTINALAMDDKGKIIDLFDGLKDL 141 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +N ++R V F ED LR++R RF ++ L F++ +T +++ +H LE + Sbjct: 142 KNGIIRAVGNPEERFHEDALRMMRAVRFGSQ---LDFKVELDTFNAIKKNSH--LLEKIA 196 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRV 205 ER+ E L +NP+ Q D + Sbjct: 197 IERIHVEWVKLLLGKNPKQGLQEFLDTELYKY 228 >UniRef50_C0M731 CCA-adding enzyme n=4 Tax=Streptococcus dysgalactiae group RepID=C0M731_STRE4 Length = 404 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 74/213 (34%), Positives = 104/213 (48%), Gaps = 15/213 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 + Y VGG+VRD+LL P+ D D P+E + + G + L + EY Sbjct: 26 FEAYFVGGSVRDSLLNRPIHDVDIAA-SCYPEETKAIFLRTIDVGIEHGTVLVLENGSEY 84 Query: 59 --ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 RTE +LE+DLKRRD T+NALA D++G++ID +NGL DL Sbjct: 85 EITTFRTEDVYVDYRRPSQVSFVR--SLEEDLKRRDFTVNALALDEDGQVIDIFNGLEDL 142 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +++LLR V F ED LR++R RFAA L F I ET M+ +HA LE ++ Sbjct: 143 KHKLLRAVGRPQERFEEDALRIMRGFRFAA---SLDFDIEAETFEAMK--SHAPLLEKIS 197 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVL 206 ER + E + L + + C A L Sbjct: 198 IERSFIELDKLLMAPKWRKGILAMVACQAFNYL 230 >UniRef50_C5NYM2 CCA-adding enzyme n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYM2_9BACL Length = 386 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 16/228 (7%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHEE 57 + Y VGG VRD LLG D D + + P ++ + + L E Sbjct: 26 EAYFVGGCVRDYLLGEDFSDID-ITTNALPDQVKKVFRKSIDTGIQHGTVTILVNGDSYE 84 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RTE + + L +DL RRD TINA+A D NG++ D +NG DL Sbjct: 85 VTTFRTEEDYANHRSPEKVEFV--SNLREDLDRRDFTINAMALDYNGKLFDYHNGDSDLS 142 Query: 118 NRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++++R V + F ED LR+LR RF+++ LGF I + TL +++ +A ++ ++ Sbjct: 143 SKIIRTVNNPNERFYEDALRMLRAFRFSSK---LGFEIENNTLNAIKK--NAELIKFVSI 197 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKW 222 ER+ E + L + ++L D L + P + V + + Sbjct: 198 ERIVNEFKKLLAGKGNLRSLELLLDSK-LNLYIPFFKEVNTVQDLSSY 244 >UniRef50_B7VK01 Poly(A) polymerase n=23 Tax=Bacteria RepID=B7VK01_VIBSL Length = 472 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 75/341 (21%), Positives = 145/341 (42%), Gaps = 27/341 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFP--VFLHPQTHE 56 +LVGG VRD LLG KD D + +TP+++ L + +GR F + + Sbjct: 71 FDAFLVGGGVRDILLGSQPKDFD-IATNATPEQIKHLFRNCRLIGRRFRLAHIMFGRDII 129 Query: 57 EYALAR------TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDP 109 E A R ++ S G +++D +RRD TINA+ + + I D Sbjct: 130 EVATFRGHHQEPSKNVSAQSDEGMLLRDNVYGNVDEDAERRDFTINAMYYNIADYSIHDY 189 Query: 110 YNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 G+ DL+++L+R + + EDP+R+LR RFAA+ L F I ++T + E+ H Sbjct: 190 AGGVEDLEDKLIRLIGDPETRYREDPVRMLRAMRFAAK---LDFDIEEDTADPIEELAH- 245 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 L+ + R+++E+ L + + + ++R+ + +FP + F + + Sbjct: 246 -LLKDIPAARLYEESLKLLQSGHGLETYHLMREYNLFQQMFPSVAEHFTEGYDSHTEQML 304 Query: 227 D-TGIHTLMTLSMAAMLSPQVDVRFATL----CHDLGKGLTPPELWPRHHGHGPAGVKLV 281 D T + + ++P FA + + L L + + A ++ Sbjct: 305 DLVLDSTDLRIEDGKRVNP--AFMFAAMLWYPMNKLADKLVAEQGMAHYDAIMEASNIIL 362 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKL 322 ++ + + +P R V + + +++L Sbjct: 363 DRQVKSIAIPRRHTATIREVWQLQLRLPRRNGKRAVRLMEL 403 >UniRef50_B1MYC1 CCA-adding enzyme n=7 Tax=Lactobacillales RepID=CCA_LEUCK Length = 403 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 68/213 (31%), Positives = 100/213 (46%), Gaps = 15/213 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHE 56 + Y VGGAVRD LL P+ D D + + P+E+ + + + L Sbjct: 25 FEAYFVGGAVRDMLLNKPIHDVD-IATSAFPEEIKALFTKTVDTGIQHGTVMVLDHGDGY 83 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE +L +DLKRRD TINA+A +G+IID ++GL D+ Sbjct: 84 EITTFRTESTYTDFRRPDKVTFVR--SLAEDLKRRDFTINAIAMTKDGDIIDLFDGLTDM 141 Query: 117 QNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + +R V A F ED LR++R RF+A+ LGF IA T A ++++ LE + Sbjct: 142 AQKRIRAVGDAEVRFNEDALRIMRALRFSAQ---LGFDIAPHTKAALKQIGR--NLEKIA 196 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVL 206 ER+ E E L + V + +R L Sbjct: 197 VERIRVEFEKLLMGQYASNSLSVAIEADLIRYL 229 >UniRef50_A7HLG0 Polynucleotide adenylyltransferase region n=4 Tax=Thermotogaceae RepID=A7HLG0_FERNB Length = 883 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 20/219 (9%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQ------EMLDAGYQQVGRDFP--VFLHPQT 54 +Y+VGG VRD +L + D D VV G+ + + L+A + F V Sbjct: 485 VYVVGGFVRDLILNIENYDIDIVVEGNGIEFAKYMAQQLNAIVVPYEKFFTANVIFKDGF 544 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDPY 110 + A ARTE G T++ DL RRD TINA+A N G + D + Sbjct: 545 KIDVATARTEYYESPGELPQVDI----STIKKDLYRRDFTINAMAIKLNPQDFGTLYDFF 600 Query: 111 NGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 N DL+ ++R + +F EDP R++R RF RY GF++ + TL L+++ L Sbjct: 601 NCQKDLEEGVIRVLHNLSFVEDPTRMIRAVRFEQRY---GFKMENYTLDLLKKNLSERYL 657 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFP 208 E ++ R+ +E E L +NP + + + ++ +FP Sbjct: 658 ERVSGSRIRQEIEKILEEKNPIKAIKRMAELDMIKHIFP 696 >UniRef50_C0WTJ5 tRNA nucleotidyltransferase/poly(A) polymerase n=4 Tax=Bacilli RepID=C0WTJ5_LACBU Length = 405 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 82/408 (20%), Positives = 151/408 (37%), Gaps = 63/408 (15%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHEE 57 + Y VGG+VRD +L P+ D D + + P E+ + + + L T E Sbjct: 31 EAYFVGGSVRDTILQRPIHDVD-IATSAYPSEVKSLFKRTADTGIEHGTVMILDHGTGYE 89 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RTE +L++DLKRRD TINALA +NG+I D + GL D+ Sbjct: 90 VTTFRTESGYQDYRRPDKVTFVR--SLKEDLKRRDFTINALALSENGKITDLFGGLNDMS 147 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +++R V F ED LR++R RFA++ L F+I +TL + + H+ L+ + Sbjct: 148 KKIIRAVGDPEERFNEDALRMMRAVRFASQ---LDFKIEQQTLTGIYD--HSELLKKIAV 202 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E + + + ++ + + P+ V H + Sbjct: 203 ERIHSEFVKMMLGVDAKNGLNLMIKSQLYQFV-PDFSEHLTVLQKI-------VATHFDL 254 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + QV F ++ + +R + N+I Sbjct: 255 DNEV------QVWALFTSMFQFNRDQVI--------------------SFLKRWKTANKI 288 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + L E I + + N + A ++ + +++ D ++ Sbjct: 289 INDVILTTELIFQIKSHKVGN-------LELYKAGKQNVQNAVAIISNYTDFDSAKLIKA 341 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEAGF--KGVEIREELTRRRIAAV 400 D ++ +V +++ G G ++ E L A + Sbjct: 342 YDQLPITTKKQL-----NVTGGDLIKRGILNPGPKLGETLEALEKAVI 384 >UniRef50_C9R471 Poly(A) polymerase (PAP) (Plasmid copy number protein) n=68 Tax=Gammaproteobacteria RepID=C9R471_AGGAD Length = 592 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 84/344 (24%), Positives = 144/344 (41%), Gaps = 30/344 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG---YQQVGRDFP--VFLHPQTHE 56 + Y+VGG +RD LLG KD D V + P+++ + VGR F + + Sbjct: 26 EAYVVGGCLRDLLLGKKPKDFD-VATNARPEQIQAVFQRQCRLVGRRFRLAHVMFGREII 84 Query: 57 EYALAR-------TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIID 108 E A R E+ + G TLE D +RRD ++NAL + + + D Sbjct: 85 EVATFRAGHMEHHNEKLAKQSEEGMLLRDNVYGTLEQDAERRDFSVNALYYNPQDNTLKD 144 Query: 109 PYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 +NG+ DL+N LR + + EDP+R+LR RF A+ L + + A ++E++H Sbjct: 145 YFNGIDDLKNGKLRLIGDPVTRYQEDPVRMLRSIRFMAK---LEMFLDKPSEAPIKELSH 201 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 L+++ P R+++E+ L + +++LR G LFP + F + Sbjct: 202 --LLKNIPPARLFEESLKLLQGGSGVKTYRLLRQYGLFEQLFPLLQNYFTEREDSMAEKM 259 Query: 226 IDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKG----LTPPELWPRHHGHGPAGVKLV 281 I + T +A L FA + L + + A L+ Sbjct: 260 ILRAL-TSTDERVADKLPINPAFLFAAFFWYPLRERVEMLKNEGGLNNYDAYALASNDLL 318 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDS 325 + LC L +P + R + L F PK++ ++ + Sbjct: 319 DVLCNALAIPRRHTAVIRDIW---SLQLQFLKRTPKSVQRVMEQ 359 >UniRef50_A8SDN5 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDN5_9FIRM Length = 444 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 78/304 (25%), Positives = 118/304 (38%), Gaps = 54/304 (17%) Query: 9 AVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ------VGRDFPVFLHPQTHEEYALAR 62 VRD+LLG D D + PQ++++ + + + E R Sbjct: 29 CVRDSLLGRTAHDWDLC-TSALPQQVMELFGTEQCIPTGLQHGTVTIKYGGQLYETTTFR 87 Query: 63 TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLR 122 TE G PDV +DL RRD TINA+A + ++DP+ G DLQN LLR Sbjct: 88 TEGSYTDGRHPDAVQFVPDV--REDLARRDFTINAMAYNAAEGLVDPFGGQKDLQNGLLR 145 Query: 123 HVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 V F ED LR+LR+ RFAAR+ GF + T R++ A L+ ++ ER+ + Sbjct: 146 AVGEPQQRFTEDALRILRLYRFAARF---GFTLDAATARAARQL--APHLDCISAERIQE 200 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMA 239 E L P + + L V+ PE+ A + Sbjct: 201 ELAKLLVAPQPGAYL----EPAVLAVVLPELTPAALEAAKP--------------VVDAC 242 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 + VR+A L LG+ T ++ +RLR N + Sbjct: 243 PAGEENLPVRWAALLGTLGEADT-------------------RRVLKRLRCSNACIEETA 283 Query: 300 LVAE 303 ++ Sbjct: 284 VLVR 287 >UniRef50_C1XQ82 Uncharacterized domain HDIG-containing protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XQ82_9DEIN Length = 410 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 105/381 (27%), Positives = 155/381 (40%), Gaps = 37/381 (9%) Query: 11 RDALLGLPVKDRDWVVVGSTPQEML-DAGYQQVGRDFPVFLHPQTHEEYALARTERKSGS 69 RD +LG KD D+VV P+E D ++ G FP+ E+ R + Sbjct: 2 RDLMLGKRPKDLDFVVPN--PEEAARDLAHRLGGSIFPL------DEKRRFWRVVAPGTT 53 Query: 70 GYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRHVSPA-F 128 YA LE DL RRD T+NALA ++ G ++ DL++RLLR + A Sbjct: 54 Y-----DYAPMPQGLEVDLLRRDFTLNALAVNEQGLVLGLPIARYDLEHRLLRAIRKANL 108 Query: 129 GEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP--ERVWKETESALT 186 EDPLR LR R G R+ T + E P ERV +E L Sbjct: 109 WEDPLRSLRAVRI---TLTAGLRLEPHTEGWIYEHAQYLRESGALPAWERVGEELSQILR 165 Query: 187 TRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQ- 245 V F L G L V PE+ A GV H +D H+L L+ +L P Sbjct: 166 HPAAAVGFLRLERAGLLEVYLPELAAGIGVEQHGAHH--LDVWRHSLEVLAQLTLLRPDA 223 Query: 246 -VDVRFATLCHDLGKGLT----PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + +R+A L HD+ K T P + +GH G + Q+ RLR P+E+ A Sbjct: 224 HLALRWAALLHDVAKPQTRQWSPEKGRYTFYGHDALGAEQARQILNRLRQPSEVVAEAVR 283 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + H P + + + R+ + + +L AD+ G G+ Sbjct: 284 LVRLHM---QHPPQGGRELRRFL-----HRRREALPELIWLQLADMTGILGYRERVEELR 335 Query: 361 RWLREAWEVAQSVP-TKAVVE 380 L+ +A+ P K +++ Sbjct: 336 EQLQAIESLAEGTPSPKPLLD 356 >UniRef50_C5CF12 CBS domain containing protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CF12_KOSOT Length = 866 Score = 207 bits (528), Expect = 5e-52, Method: Composition-based stats. Identities = 97/430 (22%), Positives = 155/430 (36%), Gaps = 73/430 (16%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPV------------ 48 M YLVGG VRD LL +P D D VV G V R F V Sbjct: 471 MPTYLVGGMVRDLLLNIPNYDIDVVVEGDA-----RIFSHTVKRYFDVKIVEHKSFKTSS 525 Query: 49 -FLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN---- 103 F + A ARTE T++ DL RRD +INA+A N Sbjct: 526 IFFSDGVRIDVATARTEFYEEPAVLPNV----ETSTIKKDLYRRDFSINAMAIKLNHEEY 581 Query: 104 GEIIDPYNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMRE 162 G ++D + DL ++R + +F EDP R+LR RF R+ GF+I + TL L+++ Sbjct: 582 GLLLDFFGCRKDLAKGIIRILHNLSFIEDPTRILRAIRFEQRF---GFKIEERTLQLLKK 638 Query: 163 MTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKW 222 + G LE +T +R+ E E L PQ + + L+ LFP GV + Sbjct: 639 AVNDGYLERVTGQRLRDELEKILAEPEPQNAVKRMTKLDILKHLFP------GVRHSKEL 692 Query: 223 HPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVE 282 D T+ S ++ V + + + T Sbjct: 693 QKHFDRLFTRWETIEKLTNESRKITVMVMLVLENTPEESTDW------------------ 734 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTS 342 + R P + ++ + + + +L + A ++ Sbjct: 735 -IISRYGFPKRLPEVLKTSLRILKKLQEMEDWRFSNLYRLMERPSA--------EIFHFI 785 Query: 343 EADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEA-GFK-GVEIR---EELTRRRI 397 +A E ++L+ V +++ G K G EI+ +EL R+ Sbjct: 786 DAHF-----DEKKSNILLKYLKALESNKPKVNGGILIQKYGLKEGPEIKMILKELYCARL 840 Query: 398 AAVASWKEQR 407 + +E+ Sbjct: 841 EGLPESEEEA 850 >UniRef50_Q1YQK0 Poly(A) polymerase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQK0_9GAMM Length = 453 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 83/340 (24%), Positives = 138/340 (40%), Gaps = 28/340 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY--QQVGRDFPVFLHPQTHEEY 58 + Y+VGG VRD L+GL KD D V + P E+ + + +GR F + H Q E Sbjct: 52 FEAYVVGGCVRDLLIGLKPKDFD-VATSAKPWEVKELFRRSRIIGRRFQIV-HVQFSREI 109 Query: 59 ALARTERKSGSGYT----------GFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEII 107 T R + S T G T+E+D RRDLT+NAL D I Sbjct: 110 IEVTTFRSNSSQSTSKNRRQQTDSGMLTRDNVFGTVEEDASRRDLTVNALYYDPSTNSIH 169 Query: 108 DPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 D NG+ D+ +++R + F EDP+R+LRVARFAA+ LGF I T M+ Sbjct: 170 DFTNGIDDVDAKIIRIIGDPETRFREDPVRLLRVARFAAK---LGFNIEPATANPMKH-- 224 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHP 224 A +L+ ++P R++ ET + F++L + + P++ + Sbjct: 225 RAADLQQVSPPRLFDETLKLFMSGQGLDTFKILVEHRLFDYIVPQLGPMLNDRQGIPMKL 284 Query: 225 EIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLV 281 I+T + + ++P +A L + L + A +++ Sbjct: 285 VSQALINTDKRIRASQRVTPAFI--YAALLWPAVQRLASNFEKNGNSSPYALSKAAGEII 342 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK 321 +P R + + + + +V+ Sbjct: 343 LNQIPVTAIPKRFSIPMREIWDLQLHLRRRGGNRAQRLVE 382 >UniRef50_Q6MEY5 Putative poly A polymerase n=2 Tax=Parachlamydiaceae RepID=Q6MEY5_PARUW Length = 412 Score = 207 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 66/217 (30%), Positives = 96/217 (44%), Gaps = 12/217 (5%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLHPQTHEEYAL 60 Y GG VRD ++G P +D D + +TP +++D VG F V + ++ + Sbjct: 21 AYFAGGWVRDYVMGHPSEDID-IATDATPAQIMDIFPNTLLVGLAFGVVIVVWEGHQFEV 79 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEII-DPYNGLGDLQNR 119 A T RK G T +D RRD TIN + D E+I D NG D++ Sbjct: 80 A-TFRKDLDYVDGRHPSGIVLSTAREDALRRDFTINGMFYDPLKEVIYDFVNGQEDIRRH 138 Query: 120 LLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 L+R + F ED LR+LR RF+AR+ GF I ET + E + ER Sbjct: 139 LIRAIGNPHERFQEDRLRMLRAFRFSARF---GFAIELETQQAIFENAEQ-LFPAVAIER 194 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDAL 213 +W+E + + L V+FPE+ L Sbjct: 195 IWQEFKKMAMYPCFDQAIVEMHRLTLLDVIFPELKGL 231 >UniRef50_A6TJG8 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TJG8_ALKMQ Length = 472 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 95/439 (21%), Positives = 172/439 (39%), Gaps = 67/439 (15%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 + IYLVGG++RD LL +KD D ++ + + G F + ++ + Sbjct: 17 IDIYLVGGSIRDFLLNRNIKDLDLIIKEDPGRFAEKIAKELQGSYFVL------DQDRGI 70 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-------NGEIIDPYNGL 113 R + K G + DL +RD TINA+A ++IDPY G Sbjct: 71 HRVKVKDGITID---LAKFQGEDILADLAKRDYTINAMAYPLESGWPIDESQLIDPYGGQ 127 Query: 114 GDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 D++ +++R +S F +DP+R+LR R + L F + DET ++ + + Sbjct: 128 QDIKEKVIRQISEKNFQQDPIRMLRGPRLMGQ---LDFEMDDETKKSIQR--NCLLINEA 182 Query: 173 TPERVWKETESALTTRNPQVFFQVLR-DCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ER+ E + L N + + L + L +FPEI + V K+H +D H Sbjct: 183 PGERIATEIFTLLGEENTHEYLEFLDKELHVLDKIFPEIINMKDVGQ-CKYHV-VDCWTH 240 Query: 232 TLMTLSMAAML---------------------------SPQVDVRFATLCHDLGKGL--- 261 +L T+ +A M+ + ++ L HD+GK Sbjct: 241 SLYTMRIAEMVIYHQGFFENHIREAYEVHTSKKVAGEHTRLQLIKLGALFHDIGKPSAQK 300 Query: 262 TPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHD---LIHTFPMLNPKT 318 R GH G ++V+ ++L++ + + + E H +++ ++ K Sbjct: 301 VDETGRVRFRGHEITGAEIVKVYGEKLKLSVKEQQMLYRYIELHMGPLVLYKSNDVSGKA 360 Query: 319 IVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTK-- 376 + KLF + + + L + AD+ + G + +A + T+ Sbjct: 361 LYKLFKEMG-----EETLDILLIAFADIVATRKLLDPEEEMGMFKIHIEYIANNYITRYK 415 Query: 377 --AVVEAGFKGVEIREELT 393 + G EI E L Sbjct: 416 PIENISHIISGKEIMETLN 434 >UniRef50_Q2B3W5 TRNA nucleotidyltransferase n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B3W5_9BACI Length = 400 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 101/404 (25%), Positives = 168/404 (41%), Gaps = 44/404 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLHPQTHEEYA 59 + Y VGG+VRD LLG + D D + +TP E+ + VG + + + Y Sbjct: 25 EAYFVGGSVRDYLLGKDISDVD-IATSATPMEIKGIFPRTADVGIEHGTVIVLYDGDSYE 83 Query: 60 LARTERKSGSGYTGFTCYAAPDV--TLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 + T +S S Y F + D +L++DLKRRD +N++A +G IIDP+ G D++ Sbjct: 84 V--TTFRSESDYEDFRRPSKVDFIRSLDEDLKRRDFRMNSMAMSKDGRIIDPFGGQEDIR 141 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++ + V F ED LR++R RFA++ L F+I ET + ++ A LE + Sbjct: 142 SKRIATVGNPLERFYEDALRMMRAVRFASQ---LSFQIDGETYEAL--VSEAYLLEKIAV 196 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER E E L N + +++ D G + L P A E+ + L Sbjct: 197 ERKLAEFEKLLAGENSFMALKIMADTGLSQHL----------PGLAGKKQELISFAGRLD 246 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + ++ R+A L LG E + R ++ + ++ L + Sbjct: 247 SGLLSEE-------RWALLSAGLGHDFKTAESFLRSWKMPVKKIRQIGKILYWL----QY 295 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIV-KLFDSIDAWRKPQRVEQ---LALTSEADVRGRT 350 R + E N + ++ D P R+ + T E DV G Sbjct: 296 RSVQNWTLESVYKAGAEAARNAERVLAATGDDSADEEVPVRLYASLPIRSTKELDVTGND 355 Query: 351 GFESADYPQGRWLREAW-EVAQSVPTKAVVEAGFKGVEIREELT 393 + + P G W++E +V S+ + + K EIR L Sbjct: 356 LIQWFNKPGGPWVKELLGQVENSIISGHLAN---KKEEIRGWLE 396 >UniRef50_B9Y2T0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2T0_9FIRM Length = 416 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 93/413 (22%), Positives = 153/413 (37%), Gaps = 58/413 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEML----DAGYQQVGRDFPVFLHPQTHEE 57 + + VGG VRD LLG PV+D D V + P++ + +AGY + ++ Sbjct: 22 EAWWVGGCVRDTLLGRPVQDVD-VTTSALPEQTIVCFRNAGYPVIPTGLKHGTVTVMIQD 80 Query: 58 YALARTERKSGSGYTGFT--CYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 + T +S S Y +L +D RRD TINAL + + D ++G D Sbjct: 81 IPIEVTTYRSDSDYQDHRHPESVRFTRSLWEDCARRDFTINALCWHPDLGLRDYFHGQRD 140 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L+N+++ + F ED LR+LR RFA+ LGF + T + L L Sbjct: 141 LKNKVIACIGNPYQRFDEDALRILRALRFAS---TLGFALDLGTRQAL--FHQEELLRVL 195 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER+ +E E + F + L VLFP++ AL +P DT Sbjct: 196 SAERIAREMEKMVVGLRWPEIFA--NNYEILAVLFPQLPALQ---SPQAIQKAFDTF--- 247 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 P R A C L TP H +L+ N Sbjct: 248 -------RFCPPVTLPRLA--CFFLETEQTPLVYCIDQALH----------WTGQLKFSN 288 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 + + + + P+ + ++L P R + +A R Sbjct: 289 QNKKNLIQLVRY----QNHPIPQDRVSLRLL----IHELPDRFGEWIQLQQA--LNRLTP 338 Query: 353 ESADYP----QGRWLREAWEVAQ-SVPTKAVVEAGFKGVEIREELTRRRIAAV 400 E A + + + + Q ++ ++ AG +I L ++ + AV Sbjct: 339 EQAAHLIAASEEIRGHDCLTLKQLAINGADLIAAGCPRPQIS-ALLKQSLNAV 390 >UniRef50_Q7NCQ4 PolyA polymerase n=1 Tax=Gloeobacter violaceus RepID=Q7NCQ4_GLOVI Length = 477 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 93/354 (26%), Positives = 137/354 (38%), Gaps = 47/354 (13%) Query: 5 LVGGAVRDALLGLP--VKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 LVGG+VRDALL D D+V G + +++G F V E+ + R Sbjct: 38 LVGGSVRDALLNRTRVPLDLDFVCPGPVAERA-RVLARRLGAGFAVL-----DAEHEIVR 91 Query: 63 TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN-GEIIDPYNGLGDLQNRLL 121 SG L DL RRD T+NA+A D + GE+ DP++G GDL R L Sbjct: 92 LVLDSG---ITLDFARRQGADLVSDLARRDYTVNAIAWDVHAGELFDPFDGRGDLTRRTL 148 Query: 122 RHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 R + A +DPLR+LR R AA+ L F I T A + HA L ++ ERV +E Sbjct: 149 RAICEANLVDDPLRLLRGYRLAAQ---LDFAIEPATRAWIG--LHAHRLAAVSAERVREE 203 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL---- 236 + + G L PEI + + P+ +H + HT + Sbjct: 204 LCALICAPTGADALLATYRDGLLADWLPEIAPMEAI-GPSGYHH-LPLIEHTFEVIRQVD 261 Query: 237 ----SMAAMLSPQVD------------VRFATLCHDLGKGLT----PPELWPRHHGHGPA 276 A + +D V+ L HD+ K T P GH Sbjct: 262 GAIADFAEQVRADMDRQVTGGHSVRTLVKLGALLHDIAKPPTSKLDPASGRMSFIGHESL 321 Query: 277 GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNP---KTIVKLFDSID 327 G + Q+ QRL+ + + + H P + + +L + Sbjct: 322 GANMTRQILQRLKFSRDEERWVAALVQHHLRPGQLAAHWPPSNRAVYRLCRDLG 375 >UniRef50_B0BS81 PolyA polymerase n=23 Tax=Gammaproteobacteria RepID=B0BS81_ACTPJ Length = 510 Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 72/341 (21%), Positives = 134/341 (39%), Gaps = 27/341 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG---YQQVGRDFP--VFLHPQTH 55 + Y+VGG +RD LLG KD D V + P+E+ + +GR F + + Sbjct: 99 FEAYVVGGCIRDLLLGHKPKDFD-VATNAKPEEIQKIFGRQCRLIGRRFRLAHIVFGRDI 157 Query: 56 EEYALAR-------TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEII- 107 E A R +++ S G TL +D +RRD ++N+L D +I Sbjct: 158 YEVATFRADHASHNSDKISKVSEEGMLLRDNVYGTLREDAQRRDFSVNSLYYDPKHNLIF 217 Query: 108 DPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 D ++G+ DL+ LR + + EDP+R+LR RF A+ L + + +RE+ Sbjct: 218 DFFDGITDLKAGKLRLIGDPVVRYQEDPVRMLRAVRFMAK---LDMFLDKPSDTPIRELA 274 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHP 224 H L+++ R++ E+ + +Q++R G LFP + F + Sbjct: 275 H--LLKNIPAARLFDESLKLFQSGQGFKTYQLMRQYGLFEQLFPVLTPFFTERNDSNAER 332 Query: 225 EIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKG----LTPPELWPRHHGHGPAGVKL 280 + +++ + L FA L + L H A + Sbjct: 333 MLSKALNSTDD-RIRDNLRVNPAFLFAALLWYPLREKMEVLKNEGGLNSHDAMMLAANDV 391 Query: 281 VEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK 321 + + C+ + + + R + + P+ ++ Sbjct: 392 LAESCKAIALHRRHTSVIRDIWALQFQMTKRSGKRPQQTLE 432 >UniRef50_UPI00016C46B5 metal dependent phosphohydrolase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46B5 Length = 410 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 93/417 (22%), Positives = 150/417 (35%), Gaps = 60/417 (14%) Query: 7 GGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFLHPQTHEEYALART- 63 GG VRD LGL +D D V + P+++ L ++G F V + T Sbjct: 16 GGCVRDEFLGLVPEDYD-VATSARPEQLRPLFRRRNEIGAHFGVVQVIGPKKADGTWHTI 74 Query: 64 ----ERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQN 118 R G+ G T E+D +RRD T+N + D E++D G DL Sbjct: 75 EVASFRSDGAYTDGRRPDTVTFSTPEEDAQRRDFTVNGMFFDPVRNELLDFVGGRADLDA 134 Query: 119 RLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 ++LR + F ED LR+LR AR A R+ G I T ++M A ++ ++ E Sbjct: 135 KVLRAIGDPFARFTEDKLRILRAARMATRF---GLAIDPTTRDAAQQM--APQVSVVSAE 189 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 RV +E N +LR+ G + + PE+ P D L Sbjct: 190 RVAEELRKLFAHPNRTRGLALLRELGLIEPILPELT------------PSADRASAALAA 237 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 LS P + FA H +G+ +T E++ +RL++ N Sbjct: 238 LSEVGGRLP-FPLAFAVTLHAVGRAVT-------------------ERVAERLKLSNVES 277 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLF--DSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 D + ++ ++ P + L ID R + A E Sbjct: 278 DRLCWLVANQSVLTDAEVMRPSKLKPLLVHPGIDDLLALHR-----ALATATGGSLAPVE 332 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIR---EELTRRRIAAVASWKEQ 406 E + ++ G K G + + + ++ A+ KEQ Sbjct: 333 FCTRVLRDTPPEELNPPPVLTGADLIARGLKPGPAFKRLLDAVREAQLEGRAATKEQ 389 >UniRef50_C6N7M1 Poly(A) polymerase (PAP) (Plasmid copy number protein) n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N7M1_9GAMM Length = 462 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 18/231 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFP--VFLHPQTHE 56 + Y+VGG+VRD +L KD D V +TP ++ L + +GR F L + Sbjct: 71 FQAYIVGGSVRDLMLHKAPKDFD-VATNATPNQIKNLFRNGRIIGRRFKLVHVLFHREII 129 Query: 57 EYALARTERKSGSG----YTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYN 111 E A R+ G +L++D RRD TIN+L + + IID Sbjct: 130 EVATFRSHEAVDESQQTNERGMLVRDNAFGSLDEDAWRRDFTINSLYYNITDSTIIDFTG 189 Query: 112 GLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G+ D+Q++L+R + + EDP+R+LR RF+A+ L F +A ET A ++++ Sbjct: 190 GVKDVQDKLIRMIGDPVTRYKEDPVRMLRAVRFSAK---LHFNLAPETEAPFPDISY--L 244 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAP 219 + H++ R++ E N + ++L G + L P+ AL P Sbjct: 245 ITHVSSSRLFDEMTKLYQCGNAETVQKLLLQYGLFQHLCPQTTALLDSQYP 295 >UniRef50_D0KJD5 Poly(A) polymerase n=10 Tax=Enterobacteriaceae RepID=D0KJD5_PECWW Length = 482 Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats. Identities = 76/346 (21%), Positives = 140/346 (40%), Gaps = 36/346 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPV----------- 48 + YLVGG VRD LLG KD D + +TP ++ L + VGR F + Sbjct: 73 EAYLVGGGVRDLLLGKKPKDFD-ITTNATPDQVRKLFRNCRLVGRRFRLAHIMFGPEVIE 131 Query: 49 FLHPQTHEEYALARTERKSGS--GYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGE 105 + H + + E K+ S +G ++E+D +RRD +IN+L + Sbjct: 132 VATFRGHHDQHQEQQEVKNSSQQAQSGMLLRDNIFGSVEEDAQRRDFSINSLYYSISDFS 191 Query: 106 IIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMRE 162 + D NGL DL+ ++R + + EDP+R+LR RFAA+ L ++ ET + Sbjct: 192 VRDYTNGLNDLRQGVIRMIGDPETRYREDPVRMLRAVRFAAK---LNMTVSPETAEPIPR 248 Query: 163 MTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKW 222 + A L + R+++E+ L + +++L + + LFP + F + Sbjct: 249 L--ASLLHDIPAARMFEESLKLLQSGYGYPTYKMLCEYQLFQPLFPLLSRHFTPNGDSTL 306 Query: 223 H-------PEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGP 275 D + M ++ A + S + + + L Sbjct: 307 ERMVAQVLKNTDQRLQNDMRVNPAFLFSAMLWYPL----IEHAQKLAQESGLAYFDAFAL 362 Query: 276 AGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK 321 A ++++ C+ L +P I L R + + + +++ Sbjct: 363 AMNDVLDEQCRSLAIPKRITSLVRDIWQLQTRLSRRQGKRAYKLME 408 >UniRef50_Q0FDP1 Poly A polymerase family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FDP1_9RHOB Length = 383 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 74/257 (28%), Positives = 111/257 (43%), Gaps = 13/257 (5%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEY--- 58 ++ VGG VR++LLGLP+ D D + + P E+++ + + P ++ T Sbjct: 26 QVLFVGGCVRNSLLGLPITDID-ISTNARPDEIINLAKKAGLKSIPTGINHGTITIISNN 84 Query: 59 -ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 A T + G A +EDD +RRD TINA+ +G IIDP NG+ DL+ Sbjct: 85 KAFEVTSFRKDIKTDGRHATVAYSDKIEDDAERRDFTINAIYMTTDGIIIDPLNGMKDLK 144 Query: 118 NRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 R +R + + ED LR+LR RF A Y I E L+ + + L Sbjct: 145 KRHVRFIKDPNKRIIEDYLRILRFFRFTAEYGDPDLGIDAEGLSAC--AANIDGIALLAK 202 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ERV E L T+NP + G L + P A +P H E I+ + Sbjct: 203 ERVGSEIRKILKTQNPSSVLAAMEISGILSNILPG-TACKNMP--TLIHLENKNTINWIT 259 Query: 235 TLSMAAMLSPQVDVRFA 251 L + P +R + Sbjct: 260 RLIVLGGADPTNSLRLS 276 >UniRef50_UPI0001698637 polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698637 Length = 225 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 95/215 (44%), Positives = 128/215 (59%), Gaps = 1/215 (0%) Query: 186 TTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQ 245 NP FF LR+ GAL L PE+D+L+GVP P +WHPEIDTG+HT+M L+ AA LS + Sbjct: 4 CEPNPVPFFAALREVGALARLLPELDSLWGVPQPERWHPEIDTGVHTMMVLAQAARLSDE 63 Query: 246 VDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFH 305 +RFA L HDLGK TP + P HHGH GV ++ LC+RLRVP ++LA +H Sbjct: 64 QSIRFAALTHDLGKASTPAHILPSHHGHEERGVAILRALCRRLRVPTRYQELAECCGRYH 123 Query: 306 DLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLRE 365 +H L T +KL + +DA+R+PQR+E L EAD RGR GFE YPQ LR Sbjct: 124 SQLHHLDELKATTRLKLLERLDAFRRPQRLEAFLLVCEADFRGRAGFEQRTYPQADRLRR 183 Query: 366 AWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 + A SV + + + G + + + R R+ + Sbjct: 184 LYRAAASVDSSQLPKW-VSGKAMGDAMRRLRLEVM 217 >UniRef50_B8EDX6 Poly(A) polymerase n=5 Tax=Shewanella RepID=B8EDX6_SHEB2 Length = 513 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 69/228 (30%), Positives = 107/228 (46%), Gaps = 20/228 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFP--VFLHPQTHE 56 K YLVGG VRD LLG+ KD D VV +TP+E+ L + VGR F + + Sbjct: 92 FKAYLVGGGVRDLLLGIEPKDFD-VVTNATPEEIKKLFRNCRVVGRRFRLAHIVFGRDVI 150 Query: 57 EYALAR------TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDP 109 E A R E+ S + G +++D +RRD T+NAL D + I Sbjct: 151 EVATFRGHHGESNEKVSKANAEGRLLRDNVYGEIDEDAERRDFTVNALYYDISDYSIRSY 210 Query: 110 YNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 G+ DL+ LR + + EDP+R+LR RFA + L I T A ++++ A Sbjct: 211 GGGMTDLKAGTLRLIGDPETRYREDPVRMLRAVRFATK---LNMGIETVTAAPIKQL--A 265 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALF 214 L+ + R+++E F+++++ LFP++ AL Sbjct: 266 PLLKDIPAARMYEEVLKLFFAGKALANFELMQEYKLFAPLFPQVAALL 313 >UniRef50_C6E8T1 Poly(A) polymerase n=3 Tax=Geobacter RepID=C6E8T1_GEOSM Length = 482 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 78/290 (26%), Positives = 114/290 (39%), Gaps = 64/290 (22%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFLHPQTHEEYALA 61 YLVGG VRD LLG KD D VV +TP ++ + + +GR F + H H+E Sbjct: 41 YLVGGGVRDLLLGREPKDFD-VVTDATPAQLKKMFRNCRLIGRRFRL-AHLHFHDEIIEV 98 Query: 62 RTERKSGS---------------------------------------------------G 70 T R + Sbjct: 99 ATFRSTVDASAEAPAEETAEASSEAALELPQEAVAEAELLEGEREGRRRRGHHGPSMLKS 158 Query: 71 YTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQNRLLRHVSP--- 126 G T E+D RRD T+NAL + + IID G+ DL+ L+R + Sbjct: 159 EDGMVLRDNVFGTPEEDAVRRDFTVNALFYNIADFSIIDHVGGMEDLKQGLIRTIGDPLV 218 Query: 127 AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESALT 186 F EDP+R++R RFA+ LGF I + T A + E+ G + TP R+++E L Sbjct: 219 RFTEDPVRMIRAIRFAS---MLGFNIEERTEAAIEELC--GTINKATPPRLYEEVLKLLL 273 Query: 187 TRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + +Q++R G LFP DA + H + G+ + L Sbjct: 274 LGAGERTYQMMRHSGLFAPLFPHFDAWLARESEGYPHARVSKGLEWVDEL 323 >UniRef50_Q6MM27 Poly A polymerase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MM27_BDEBA Length = 397 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 111/212 (52%), Gaps = 13/212 (6%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYAL 60 +L GG VRDALLG+ D D +TP+++ + V G+ F V + + Sbjct: 28 AFLAGGCVRDALLGVQAHDLDL-ATNATPEKVESLFSKTVNVGKSFGVMRVLVEGADIEV 86 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQNR 119 A T R G+ G + ++D +RRD T+NAL D +++D G DL+ R Sbjct: 87 A-TFRNDGTYSDGRRPENVVFSSPQEDAQRRDFTVNALFYDLATAQVLDYVEGQKDLKAR 145 Query: 120 LLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 +LR V A F ED LR+LR ARF+A+ L F + + A +++M A +++ ++ ER Sbjct: 146 VLRTVGDAERRFEEDHLRLLRAARFSAQ---LNFELEPVSFAAVKKM--AEKVKSVSGER 200 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFP 208 + +E L T + QV++D G ++VLFP Sbjct: 201 IREEMTKLLKTEHADHGLQVMKDSGLMKVLFP 232 >UniRef50_Q834S5 CCA-adding enzyme n=40 Tax=Bacilli RepID=CCA_ENTFA Length = 406 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 122/260 (46%), Gaps = 23/260 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 + Y VGG+VRDALL P+ D D + + P+E+ + V G + L ++Y Sbjct: 25 FEAYFVGGSVRDALLNKPIHDVD-IATSAYPEEIKQIFKRTVDVGIEHGTVLVLMEDQQY 83 Query: 59 --ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 RTE +L++DLKRRD TINALA D GEIID ++G+ DL Sbjct: 84 EVTTFRTESTYQDFRRPDEVTFVR--SLKEDLKRRDFTINALALDSTGEIIDLFDGIEDL 141 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 N+ +R V F ED LR++R RFA++ L F+I ++TLA + E LE ++ Sbjct: 142 TNQTIRAVGNPHERFHEDALRMMRGLRFASQ---LDFKIEEKTLAAIAEF--HPLLEKIS 196 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDA----LFGVPAPAKWHPEIDTG 229 ER+ E L N Q + + P++ LF + E + Sbjct: 197 VERITIEFVKMLLGVNRQGGLAPFIETECYQYC-PKLREQGAGLFRLMDLPARQIETEAE 255 Query: 230 IHTLMTLSMAAMLSPQVDVR 249 TL+ + ++ P+ ++R Sbjct: 256 AWTLL---IQSLNLPEAEIR 272 >UniRef50_A4W0U8 CCA-adding enzyme n=68 Tax=Streptococcaceae RepID=CCA_STRS2 Length = 403 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 105/218 (48%), Gaps = 16/218 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 + Y VGG+VRDA+LG P+ D D + S PQE + + G + L + +EY Sbjct: 25 FEAYFVGGSVRDAILGRPIHDVD-IATSSYPQETKQIFSRTIDVGIEHGTVLVLEGKKEY 83 Query: 59 --ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 RTE + +LE+DLKRRD T+NA A D+ +I+D ++G+ DL Sbjct: 84 EITTFRTEEEYVDFRRPSQVSFVR--SLEEDLKRRDFTVNAFALDEEAQIVDLFDGMTDL 141 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +NR LR V F ED LR++R RFAA L F I T M + A LE ++ Sbjct: 142 ENRTLRAVGIPAERFNEDALRIMRGFRFAA---TLDFEIEPTTFEAMVQT--APLLEKIS 196 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEID 211 ER + E + L + + + D A P++ Sbjct: 197 VERSFIEFDKLLMADFWRKGLRAMIDSKAYN-FLPDLA 233 >UniRef50_A4J3L2 Polynucleotide adenylyltransferase region n=4 Tax=Peptococcaceae RepID=A4J3L2_DESRM Length = 907 Score = 204 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 72/225 (32%), Positives = 100/225 (44%), Gaps = 20/225 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFP--------VFLHPQ 53 ++Y VGG VRD LL + D D VV G+ + + GR P + Sbjct: 478 QVYAVGGLVRDVLLKVENLDVDLVVEGNGIEMANELAKVIGGRVRPHEKFGTAEIIFPDG 537 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDP 109 + AR E +L+ DL RRD TINA+A N GE++D Sbjct: 538 YWVDVVTARVEYYE----YPAALPQVEQSSLKHDLYRRDFTINAMAVALNPERFGELVDY 593 Query: 110 YNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 +NG DLQN +R + +F EDP R+LR RF RY I +TL L++E Sbjct: 594 FNGREDLQNGAIRVLHNLSFIEDPTRILRAIRFEQRY---DMDIEPQTLRLIKEAVREKV 650 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDAL 213 + L+ ER+W E + L +P+ L + G LFPEI Sbjct: 651 IARLSTERMWGELKHILEEADPEHMLDRLSELGVWDYLFPEITFW 695 >UniRef50_B5ELD4 Polynucleotide adenylyltransferase region n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELD4_ACIF5 Length = 456 Score = 204 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 115/416 (27%), Positives = 164/416 (39%), Gaps = 50/416 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM----LDAGYQQVGRDFPVFLHPQTHEE 57 +I +VGG RDALLG+ D D + G + + + G +VG V++ Sbjct: 22 EILVVGGTPRDALLGMAAHDWDLEIHGLSEARLGECLMPFGAHRVGGRCAVWVVAGAEIA 81 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 A+ R P + E +RRD ++NAL D ++D + G+ DL Sbjct: 82 LPQAQGGRID------------PHLPWEIAAQRRDFSVNALIWDWRTQRLLDHFGGVDDL 129 Query: 117 QNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 R LR VS +FGEDPLRV R AR A + LGF I T AL R++ A L+H+ E Sbjct: 130 HARRLRMVSADSFGEDPLRVFRAARLAGQ---LGFSIEARTAALCRQL--APRLQHVPEE 184 Query: 176 RVWKETE-SALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 R+ KE E L ++ + L GA+ FPE+ AL VP HPE D IHT Sbjct: 185 RLRKEWEALLLRGQHLIRAWDSLALTGAVTR-FPELHALQAVPQRPDAHPEGDVWIHTGR 243 Query: 235 TLSMAAML-----SPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQ 286 L+ A L S + + L HDLGK T P+ R GH A E Sbjct: 244 VLAAAGQLRSGDRSRDIILMLGALLHDLGKAGTTRRDPQGRWRAFGHERARTA-AESFLS 302 Query: 287 RLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 R + V +H + + + L + AD Sbjct: 303 RYFPGRHLSRQILPVIRWHGAPYALYRDGAGR----AAYAHLALQVPDLSLLLDVAVADA 358 Query: 347 RGRTGFESADYPQGRWLREAWEVAQS--------VPTKAVVEAGFK-GVEIREELT 393 RG G P R W+ + + ++ G G ++ + L Sbjct: 359 RGAGGEHP---PAIDTARRLWQEMNAWPCLPKPLLKGPDLMALGLTPGPQLGKALA 411 >UniRef50_C6CUG0 Polynucleotide adenylyltransferase region n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CUG0_PAESJ Length = 417 Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 93/415 (22%), Positives = 148/415 (35%), Gaps = 85/415 (20%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHE 56 + VGG VRD +GLP+KD D + + P++++ + + LH Sbjct: 26 FEAVFVGGCVRDTAMGLPIKDVD-IATSARPEQVMSIFPRCIPTGLQHGTVTVLHDGGSY 84 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE + L+ DL RRDLTINA+A + GE+ DP+ GL DL Sbjct: 85 EVTTFRTESEYEKHRRPLQVEFIDR--LDGDLLRRDLTINAMAMNAAGELYDPFRGLNDL 142 Query: 117 QNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +NR +R V A F ED LR+LR RFA+++ F IA T + + H L H+ Sbjct: 143 KNRTIRCVGDADARFQEDALRMLRTIRFASQFE---FTIAHTTWRAL--VRHRELLRHIA 197 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERV E + + +P +L LR + A + + E+D Sbjct: 198 MERVHAELDRMIGGAHPGRALHLLAASKLLRYTGTVLPAAEKLAQVDPSYSELDKL---- 253 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 D R+A L G L+ E+ + LR+P + Sbjct: 254 ----------NDPDARYAALLLAEGITLSD-----------------AEETLKALRLPTQ 286 Query: 294 IRDLARLVAEFHDLIHTFPMLN--------------PKTIVKLFDSIDAWRKPQRVEQLA 339 + V ++ + + + SI W + + Sbjct: 287 KMNAILSVLFVQFAMNQLNQQSGLRLVWTSTVLQYGEEASRRWL-SIVVWNQKHHLHD-- 343 Query: 340 LTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTR 394 Q + + +P + + G ++ EEL R Sbjct: 344 -------------------QKNLFDKWLDA---MPAMTLKQLNLNGKQLAEELQR 376 >UniRef50_C9RRD1 Polynucleotide adenylyltransferase region n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRD1_FIBSS Length = 426 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 78/223 (34%), Positives = 116/223 (52%), Gaps = 17/223 (7%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ-----QVGRDFPVF--LHPQT 54 + +LVGG VRDALLG +D D V E++ + VG+ F V Sbjct: 33 RAFLVGGWVRDALLGKNCRDYDVEVYDLVQDELVPILKKYGRTNLVGKAFGVIHLAMKGL 92 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGL 113 +++ RTE K G G+ GF + ++ ++ RRD TINA+ + + DPY G+ Sbjct: 93 SLDFSFPRTESKVGYGHRGFVVHTDEKLSFKEAALRRDFTINAMGMELPELTLCDPYGGI 152 Query: 114 GDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 DL+ LLRHV PAF ED LR+LR +FA+R+A ++A ET+ L R ++ LE L+ Sbjct: 153 DDLKKGLLRHVGPAFVEDSLRILRGVQFASRFA---LKLAPETIELCRTLS----LEDLS 205 Query: 174 PERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFG 215 ER+++E + L P + + D L FPE+ L G Sbjct: 206 IERLFEEFKKWLLKPGKPSLGLRAFLDIK-LNEFFPEVSPLRG 247 >UniRef50_A4J0V4 Metal dependent phosphohydrolase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J0V4_DESRM Length = 472 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 105/447 (23%), Positives = 170/447 (38%), Gaps = 69/447 (15%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 ++ YLVGGAVRD L D D+ V + A Q + + + L + L Sbjct: 13 IQTYLVGGAVRDLFLNKIPVDLDFCVTA-----KVFALAQTLTQQYQGSLVTLDDQREML 67 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA---------QDDNGEIIDPYN 111 S + F+ D LE DL RD T+NA+A + +I DP Sbjct: 68 RVVTN---SWHLDFSPLR--DEILEKDLFARDFTLNAMALPVSMGINKYNWQNQIQDPTG 122 Query: 112 GLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 G GDL+ LLR S + +DPLR LR RFAA Y I ET+ L+R+ T +E Sbjct: 123 GKGDLKKGLLRAASSSSIQQDPLRSLRGIRFAATY---NLAIIPETMVLLRQGTR--RIE 177 Query: 171 HLTPERVWKETESALTTRNPQVFFQVL-RDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 + ER+W E + + ++ + L P + +H E + Sbjct: 178 QIAGERLWHELAILFKLPITSFWINYMDQELHFWQYLLPGQLRMAQTKQNH-YHVE-NVW 235 Query: 230 IHTLMTLSMAAMLSPQVD--------------------------VRFATLCHDLGKGLT- 262 H L T ++ ++ ++ A L HD+GK T Sbjct: 236 RHCLRTYECLEVILQELSTIPSEGEPLLIHFNQHLSGGRSRCQVLKLAALIHDVGKPDTA 295 Query: 263 --PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDL---IHTFPMLNPK 317 + HGH AGV E L RL++ R + H L ++ + Sbjct: 296 VIREDGRISFHGHAEAGVPYAEALATRLKLSRLERHYLVNLVLLHMLPLNLYNSGDRSDL 355 Query: 318 TIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY------PQGRWL--REAWEV 369 ++ +LF S++ + + LA + G E Y G+++ ++ + Sbjct: 356 SVYRLFRSLENYILDVLILSLADVTATLTAGERISELEAYRTFILNLLGKFIVEKDRFHP 415 Query: 370 AQSVPTKAVVEAGF-KGVEIREELTRR 395 + A++E G +G E+ L + Sbjct: 416 VPYLSGAALLELGIPEGPEVGLILEKL 442 >UniRef50_A9BI97 CBS domain containing protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BI97_PETMO Length = 885 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 98/429 (22%), Positives = 167/429 (38%), Gaps = 66/429 (15%) Query: 1 MKIYLVGGAVRDALLGLPVK---------DRDWVVVGSTP------QEMLDAGYQQVGRD 45 + +Y+VGG VRD LL + K D D VV G + L A Y + + Sbjct: 483 LNVYVVGGFVRDLLLAINSKSNGTKSIPYDIDVVVEGDGLLFGKYVAKQLRAKYVEHPKF 542 Query: 46 FPVFLHPQTHE------EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA 99 + + E + A ARTE +G T++ DL RRD +INA+A Sbjct: 543 HTCSIFYRNGENKIIRIDIATARTEYYEEAGELPKVEL----STIKKDLYRRDFSINAMA 598 Query: 100 QDDN----GEIIDPYNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIAD 154 N G ++D +N DL+ +R + P +F EDP R+LR RF R+ GF I Sbjct: 599 IKINSGSFGILMDFFNCKKDLEEGKIRILYPLSFIEDPTRILRAIRFEQRF---GFEIEP 655 Query: 155 ETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALF 214 TL + E G LE +T R+ +E E L P + + G L+++ + + Sbjct: 656 NTLTKLEEAVENGYLEKVTGMRIREELEKILEEPQPMKAIKRM---GKLKIILHLFEKTY 712 Query: 215 GVPAPAK-WHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGH 273 P K D + A + + VR + + TP E Sbjct: 713 YSPTLEKDLEKLFDVREY-----FKANLPNYLNKVRLFHIVLCVLLQYTPEES------- 760 Query: 274 GPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFP-MLNPKTIVKLFDSIDAWRKP 332 ++++ +R +P D + + + ++ + LN K Sbjct: 761 -------LKKITERYGLPK---DFIKNLIQVKNVFNEISIDLNDKEKTSKLSYFYEKTNG 810 Query: 333 QRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL 392 + EQL + E +LR+ ++ S+ K +++ G++GV+I+ +L Sbjct: 811 FQNEQLIFLAV------KLPEELLAKYYEYLRKIEKLKLSITGKDLLKKGYEGVQIKTKL 864 Query: 393 TRRRIAAVA 401 + + Sbjct: 865 EEIKKKLLN 873 >UniRef50_A8FEH9 CCA-adding enzyme n=5 Tax=Bacillus RepID=CCA_BACP2 Length = 400 Score = 203 bits (517), Expect = 9e-51, Method: Composition-based stats. Identities = 97/401 (24%), Positives = 157/401 (39%), Gaps = 39/401 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFL--HPQTHEE 57 + Y VGGAVRD LLG + D D + +TP + + V G++ + H E Sbjct: 21 QAYFVGGAVRDVLLGREIGDID-IATDATPDTVESLFEKTVDVGKEHGTVIVLHDGMSYE 79 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RTE + +L++DL RRDLTINA+A D NGEIID G D++ Sbjct: 80 VTTFRTESEYEDFRRPKEVAFI--TSLKEDLLRRDLTINAMAMDINGEIIDHVGGKQDIE 137 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 + ++ V F ED LR++R RF ++ LGF +A ET M + H L +++ Sbjct: 138 RKRIQTVGDPACRFQEDALRMMRAIRFLSQ---LGFELAAETAEAMEKDKH--LLANISV 192 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER E E L R + +VL L P ++ + T + L+ Sbjct: 193 ERKKIEMEKLLKGRYCERAIKVLISTKLYEEL-PGLEK-------DRLQDSFQTFPYYLL 244 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 ++ + + H LG L+ + +K + + V E Sbjct: 245 ---------DGLEEVWGAVIHLLGLDEEKAVLFLKEWKLSTKLLKDAVAISRY--VDCEW 293 Query: 295 RDLARLVAEFHDLIH--TFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 A H L+ L + + FD ++A + + + V G+ Sbjct: 294 NAEKMFEAGEHVLLSSLKITQLKHERRI-FFDELEAAKSSYDALPIKTLQDLAVSGKDLM 352 Query: 353 ESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELT 393 G+W+ E ++ + +E + I E LT Sbjct: 353 AFRQKTSGKWIAEELDLVKKAVLHNHLEN--RKEAIEEWLT 391 >UniRef50_B8KRY4 Poly(A) polymerase n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KRY4_9GAMM Length = 432 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 99/374 (26%), Positives = 148/374 (39%), Gaps = 50/374 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFPVFLHPQTHE--E 57 + Y+VGGAVRD LLG KD D V +TP+++ + + +GR F + E E Sbjct: 33 EAYIVGGAVRDLLLGGQPKDFD-VGTNATPEQIKAVFKNARIIGRRFQIVHVRFGPEIIE 91 Query: 58 YALARTERKSGS-----------------GYTGFTCYAAPDVTLEDDLKRRDLTINALAQ 100 R SGS G TLE+D RRDLTINAL Sbjct: 92 VTTYRGHHASGSAPASGKDSGNTKAHSRQSDKGLLLRDNVYGTLEEDAARRDLTINALYY 151 Query: 101 DDNGE-IIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADET 156 D E ++D NG+ D++ RL+R + + EDP+R+LRV RFAA+ L F + ET Sbjct: 152 DPEDESVLDQLNGMADVEARLVRVIGEPHTRYREDPVRMLRVLRFAAK---LQFDVESET 208 Query: 157 LALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGV 216 + E A L + R++ E F++L G L LFPE + Sbjct: 209 DHAIAEC--APLLAEIPSARLFDEFLKLFMAGYATPTFKLLYRYGLLHHLFPEPTRVLAH 266 Query: 217 PAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP------PELWPRH 270 A + + T + ++P + A + + + P Sbjct: 267 EARH-YELVVAAMESTDRRVREDRPVTPAFLL--AAIMWPVVQERAAELIHAGETAIPAF 323 Query: 271 HGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWR 330 H +G ++V ++C +P + + E D PK I L S R Sbjct: 324 H---SSGQQVVAEVCVHTAIPK---RFSLPMREMWDFQPKLERRQPKQIKSLLAS----R 373 Query: 331 KPQRVEQLALTSEA 344 + + L L EA Sbjct: 374 RFRAAYDLLLLREA 387 >UniRef50_C6ACD6 tRNA nucleotidyltransferase n=2 Tax=Bartonella RepID=C6ACD6_BARGA Length = 418 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 94/408 (23%), Positives = 158/408 (38%), Gaps = 57/408 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYA-- 59 + +VGGAVR+ LLG P+ D D PQ+++ + + P + T A Sbjct: 31 EARIVGGAVRNQLLGQPISDIDIATT-CLPQQVIARVEEAGFKAIPTGIAFGTITVVAHS 89 Query: 60 --LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 T + G A + D +RRD TINAL D G + D GL D+ Sbjct: 90 CSYEVTTLRCDIETDGRHAKVAFGRDWKKDAERRDFTINALYCDAAGNLYDDVGGLSDIA 149 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +R +R + ED LR+LR RF A Y + L ++ L+ L+ Sbjct: 150 SRTVRFIGIAEDRICEDYLRILRFFRFFAWYGAG----RPDVQGLKACVSLKHGLKKLSS 205 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+W E + L +P +R L ++FPE + G+ A IH L+ Sbjct: 206 ERIWAEMKKLLAAFDPTRALLWMRQSRILALIFPETERW-GIDA-----------IHALV 253 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 A +R + L PP+ H ++ QRL ++ Sbjct: 254 KTEQALGWKVDPLLRL--------ESLLPPDPIRLH------------EMAQRLHFSHK- 292 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV-----RGR 349 + E+ +L + + KL I + ++QL+L+ A + Sbjct: 293 --ETTRLKEWAELEIINQNCSDHFVQKL---IYFHGRQPVLDQLSLSVAASHLDNLEKSD 347 Query: 350 TGFESADYPQGRWLREAWEVAQ-SVPTKAVVEAGF-KGVEIREELTRR 395 ++ DY + L + W++ + +++ GF KGV + ++L Sbjct: 348 ALQKAEDYVKLYQLAKKWQIPTFPINGNDLIKKGFAKGVLLGKKLKEL 395 >UniRef50_A5IJ71 CBS domain containing protein n=5 Tax=Thermotogaceae RepID=A5IJ71_THEP1 Length = 863 Score = 202 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 92/409 (22%), Positives = 150/409 (36%), Gaps = 58/409 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPV--------FLHP 52 M +Y+VGG VRD LLG+ D D VV G+ + A G+ FL Sbjct: 470 MPVYVVGGFVRDLLLGIENLDIDIVVEGNALEFAEYAKRFLPGKLVKHDKFMTASLFLKG 529 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIID 108 + A AR E T++ DL RRD TINA+A N G +ID Sbjct: 530 GLRIDIATARLEYYESPAKLP----DVEMSTIKKDLYRRDFTINAMAIKLNSKDFGLLID 585 Query: 109 PYNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 + G DL+ ++R + +F +DP R+LR RF R+ FRI + T L+++ G Sbjct: 586 FFGGYRDLKEGVIRVLHTLSFVDDPTRILRAVRFEQRF---DFRIEETTERLLKQAVEEG 642 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 LE T R+ +E E L +NP + + ++ LFP + P +D Sbjct: 643 YLERTTGPRLRQELEKILEEKNPLKSIRRMAQFDVIKHLFP----------KTYYTPSMD 692 Query: 228 TGIHTLM-TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQ 286 + L + +VD +A L ++ + Sbjct: 693 GKMENLFRNIPWVEENFGEVDKFYAAL-----------HVFLEFYDDESW---------- 731 Query: 287 RLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 E+RD L + I P + L + + V+ ++ + Sbjct: 732 -----KEVRDRYSLRRNLINEIRHVEKSAPALLEMLSERVPVSFVYPLVKGVSSETICHF 786 Query: 347 RGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGF-KGVEIREELTR 394 E + + L+ + + + ++ G G I E L + Sbjct: 787 LAYLSGEKEELFKSYLLKIKNTKLEKINGEYLIRKGITSGKIIGEVLEK 835 >UniRef50_C6NWQ8 Poly(A) polymerase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWQ8_9GAMM Length = 499 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 98/405 (24%), Positives = 158/405 (39%), Gaps = 50/405 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG---YQQVGRDFPVFLHPQTHEEY 58 + YLVGG+VRD LLG KD D V + P+++ + +GR F + +H Q E Sbjct: 69 QAYLVGGSVRDLLLGREPKDYD-VATDARPEQVRKLFRRNARLIGRRF-ILVHVQFGPEI 126 Query: 59 ALARTER--------KSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDP 109 T R S +G +LE+D RRD T NAL + + I+D Sbjct: 127 VEVATFRGQGESAEETSERSASGRILADNVYGSLEEDAGRRDFTANALYYNIADRSILDF 186 Query: 110 YNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 +GL DLQ LR + + EDP+R+LR RFAA+ LGF++ A + Sbjct: 187 ADGLTDLQAGRLRMIGDPEQRYREDPVRMLRAVRFAAK---LGFQMDAAVEAAIAPCR-- 241 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 L + R+++ET T + Q F +LR G LFP++D + + Sbjct: 242 DLLLEVPSARLFEETIKLFLTGHAQSSFDLLRRTGLFAALFPQLDRVLDAADAESARELL 301 Query: 227 -------DTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVK 279 D + +++ A + + + L P + + A + Sbjct: 302 RLALEGTDQRVLLGKSVTPAFLFAALLWSALQAQRQHLEAQDKPANVALQQ-----AAAE 356 Query: 280 LVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLA 339 L+E+ R+ +P R A + E DL F + L + Sbjct: 357 LLEESRGRVAIP---RRFALPMREIWDLQPRFTRRGGRRPYALLAH----------PRFR 403 Query: 340 LTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPT---KAVVEA 381 + + + E D+P+ L W Q + KA++E Sbjct: 404 AAFDFLLLRQQSGEFVDHPELAGLGTWWTEFQEADSEGRKALMEQ 448 >UniRef50_B1HTF3 CCA-adding enzyme n=2 Tax=Bacillaceae RepID=B1HTF3_LYSSC Length = 392 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 15/228 (6%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHE 56 + +VGGAVRDALL P D D V + P+E+ + + + + P Sbjct: 22 FEAVIVGGAVRDALLNRPAHDVD-VATNALPEEVKSVFQRTVDIGIQHGTVLVIVPAGPV 80 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RT+ + +L+DDL+RRD T+NA+A +G +D Y G D+ Sbjct: 81 EVTTYRTDGEYTDHRRPDKVQFVR--SLQDDLQRRDFTMNAIAMRHDGTFVDYYGGRQDI 138 Query: 117 QNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + R++R V A F ED LR+LR RF+A+ L F IA +T+ ++ A ++ + Sbjct: 139 ELRVIRAVGDADKRFAEDALRMLRAIRFSAQ---LDFTIAKDTMTAIQN--RAPDIAFIA 193 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAK 221 ER+ E + + Q L + G L A + Sbjct: 194 KERIKAELDKLWLGTSVFSGLQKLEESGLAAYLHGNFQAHRWYDFRTE 241 >UniRef50_B5ES11 Poly(A) polymerase n=8 Tax=Proteobacteria RepID=B5ES11_ACIF5 Length = 497 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 77/231 (33%), Positives = 110/231 (47%), Gaps = 23/231 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG---YQQVGRDFPVFLHPQTHEE 57 + YLVGG+VRD LLG KD D V + P+++ + +GR F + +H Q E Sbjct: 66 FQAYLVGGSVRDLLLGREPKDFD-VATDAHPEQVRKLFRRNARLIGRRF-ILVHVQFGNE 123 Query: 58 YALARTERKSGSG---------YTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEII 107 T R S +G TG +LE+D +RRD T NAL + + I+ Sbjct: 124 IIEVATFRGSANGKEDESSEHSETGRILADNVYGSLEEDARRRDFTANALYYNIADRSIL 183 Query: 108 DPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 D G+ DLQ LR + + EDP+R+LR RFAA+ LGF + A + Sbjct: 184 DFSTGMEDLQAGRLRVIGDPEQRYREDPVRMLRAVRFAAK---LGFTLDAAAQAPIAACR 240 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFG 215 L+ + R+++ET T N Q F+ LR G LFP++DAL Sbjct: 241 K--LLQEVPSARLFEETLKLFLTGNAQTSFEHLRQMGLFAALFPQVDALLD 289 >UniRef50_C0GDZ3 CBS domain containing protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDZ3_9FIRM Length = 873 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 105/418 (25%), Positives = 159/418 (38%), Gaps = 59/418 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR-----DFPV---FLHP 52 +K++ VGG +RD LL + D D VV + + GR F L Sbjct: 473 VKVFAVGGFIRDLLLNIKNHDLDLVVEPAAIPFAEELNKMLGGRLTSHEKFGTASIVLPE 532 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIID 108 H + +R E + +L++DL RRD TIN LA N G++ID Sbjct: 533 GIHIDLVTSRQEFYA----RPAALPEVEQSSLKNDLFRRDFTINTLACSLNSPGFGKLID 588 Query: 109 PYNGLGDLQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 +NG+GDL+ L+R + + +F EDPLRVLR RF R+ GFR+ + TL+LM Sbjct: 589 LFNGIGDLEKGLIRVLYNLSFVEDPLRVLRAIRFEQRF---GFRLEETTLSLMENAAQTR 645 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 LE ++ ER+ E AL ++FP I + E+ Sbjct: 646 VLEKVSKERLHDELVLALQEEKAPEILIRYFTLNIAPMIFPGIRLSDALQERLFAAREMC 705 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQR 287 A P +V P A + +C+R Sbjct: 706 YW---------ANRNWPDTEV--------------VPGNLYLAALLLEAPFQEARHICRR 742 Query: 288 LRVPNEIRDLARLVAEFHDLIH---TFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEA 344 LR+P + R+ E + L P + +LF Q VE L L +A Sbjct: 743 LRLPQKQREPILAAVEAVPRLKEKLLANALKPSELYRLFSG-------QPVETLLLL-QA 794 Query: 345 DVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVA 401 D + +ES + + + + + E GFK G +E L+ R A + Sbjct: 795 DSKQSRIWEST----ALYWEKLRHIQPHISGHDLRELGFKPGPGFQEVLSHIRAARLN 848 >UniRef50_C8NF31 Poly A polymerase n=2 Tax=Granulicatella RepID=C8NF31_9LACT Length = 409 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 15/207 (7%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVF--LHPQTHEEYAL 60 VGG+VRD +LG + D D + +TP+E+ V G + ++ Q E Sbjct: 35 FVGGSVRDLVLGKEISDVD-IATSATPEEVKSLFSHTVDVGIEHGTVLVIYHQDSYEVTT 93 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 RTE + +LE+DL RRD TINALA +D EI+D ++GL DL+N + Sbjct: 94 FRTEGTYQDFRHPDSVTFVR--SLEEDLMRRDFTINALAINDQEEIVDYFDGLKDLENSI 151 Query: 121 LRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +R V F ED LR++R RFA + LGF I +T +R + LE + ER+ Sbjct: 152 IRCVGNPMERFNEDALRMMRAIRFAGQ---LGFTIESKTFNAIRVLK--SNLERVAVERM 206 Query: 178 WKETESALTTRNPQVFFQVLRDCGALR 204 E E + + + F + + Sbjct: 207 KVEFEKMIVSLHRSNAFLAFIESDLYQ 233 >UniRef50_C1ZGH1 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGH1_PLALI Length = 420 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 89/414 (21%), Positives = 148/414 (35%), Gaps = 66/414 (15%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG----YQQVGRDFPVFL---------- 50 GG VRD LLG KD D V + P+E+ + VG F V + Sbjct: 24 FAGGCVRDLLLGKTPKDYD-VATSANPEEVQQLFGYRRTKAVGASFGVIMVLPARKKGEP 82 Query: 51 HPQTHEEY---ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEI 106 H ++ + T RK G G + E+D +RRD TIN + D + Sbjct: 83 HHKSDQPAIPPVEVATFRKDGLYVDGRRPETVTFSSPEEDAQRRDFTINGMFFDPLTETV 142 Query: 107 IDPYNGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREM 163 D G DLQ+R LR + F ED LR+LR RF + L F I ET ++++ Sbjct: 143 HDFVGGQIDLQSRQLRAIGIAADRFKEDKLRLLRAVRFNS---ILDFSIEFETWRAIQDL 199 Query: 164 THAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH 223 A E+ ++ ER+ E L + Q L G +F +I Sbjct: 200 --APEICVVSHERIAAELRRMLAHPSRHSSIQTLDHAGLTGAIFGKI------------- 244 Query: 224 PEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQ 283 + + D+ A T LW R V+ + Sbjct: 245 -----------------LSATSPDLLLALQSLKTDHFETAMALWLR-----ELPVETLRS 282 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 +C +LR+ N+ RD + H + + + + + + + + + Sbjct: 283 ICSQLRLSNQERDAIVWL---HTMQSAWLEFSDWPVCRQKRLLAYPLVNELIASGQALAS 339 Query: 344 ADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRR 396 A + ++A W +E + V + ++ G G + ++ L + R Sbjct: 340 AQLLESRHVDAAIERLQSWSKEEIDPPLQVTGEDLIHWGISPGPQFKQILEQLR 393 >UniRef50_Q8EQD6 CCA-adding enzyme n=1 Tax=Oceanobacillus iheyensis RepID=CCA_OCEIH Length = 400 Score = 200 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 100/209 (47%), Gaps = 13/209 (6%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ--QVGRDFPVFLHPQTHEEYALA 61 Y VGG VRD LL + D D + +TP E++ + VG + + E Y + Sbjct: 24 YFVGGCVRDLLLQKDIHDID-IATSATPNEVMHLFKKVIPVGIEHGTVIVRHGGESYEV- 81 Query: 62 RTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 T R+ G VT L +DL+RRD TINALA D +G+I D ++G DL+ +L Sbjct: 82 TTYRQDGEYTDHRRPNDVRFVTNLAEDLRRRDFTINALAMDTSGQITDLFHGQDDLKKKL 141 Query: 121 LRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +R V F ED LR+LR RF+++ LG I ++TL M +++HL ER+ Sbjct: 142 IRTVGNAEERFTEDALRILRAVRFSSQ---LGCTIQEDTLEAM--FVIRKQIQHLAVERI 196 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVL 206 E ++ Q + D L Sbjct: 197 TIELTKLFQGQHVSKAIQYIIDLQLDEQL 225 >UniRef50_B4UMC4 Poly(A) polymerase n=4 Tax=Anaeromyxobacter RepID=B4UMC4_ANASK Length = 556 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 96/332 (28%), Positives = 127/332 (38%), Gaps = 34/332 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFP---VFLHPQTHE 56 + YLVGG VRD LLG KD D V + P E+ + + +GR F V+ Sbjct: 70 QAYLVGGCVRDLLLGATPKDFD-VATDAHPGEVRAIFRNCRLIGRRFRLAHVYFRAGKVI 128 Query: 57 EYALARTERKSGSGYTG------FTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDP 109 E A R + G T E+D RRD T+N L D GE+ID Sbjct: 129 EVATFRKNPTDVAEDVGEGEGDLLITRDNVFGTAEEDSVRRDFTVNGLFYDVATGEVIDY 188 Query: 110 YNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 G DL+ + + EDP+R LR RFAAR LGF IA +T MR + Sbjct: 189 VGGRADLEAHRISTIGDPEIRMREDPVRALRAVRFAAR---LGFTIAPDTFEAMRRTS-- 243 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 GEL P RV +ET L F++LR CGAL V+ P + A + Sbjct: 244 GELARCAPARVLEETFKLLRCGGSARAFELLRACGALPVILPALGAALETWDDGR---RR 300 Query: 227 DTGIHTLMTLSMAAMLSPQV--DVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQ- 283 H L L +V V L LG AG ++ Sbjct: 301 AFFAH-LAALDRLVRSGAEVSEAVLLGALLMHLGADAPRAGRGDAARADEDAGAPRWDEA 359 Query: 284 ------LCQRLRVPNEIRDLARLVAEFHDLIH 309 L Q R+P ++ + RL + Sbjct: 360 DAFLASLVQTARLPRKVAERIRLALHAQRQLE 391 >UniRef50_C4L927 Poly(A) polymerase n=2 Tax=Gammaproteobacteria RepID=C4L927_TOLAT Length = 521 Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats. Identities = 78/338 (23%), Positives = 137/338 (40%), Gaps = 27/338 (7%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFP--VFLHPQTHEEYA 59 YLVGG VRD LLG KD D VV + P+++ + +GR F + + E A Sbjct: 103 YLVGGGVRDLLLGKIPKDFD-VVTDAHPEQIRKLFNNCRLIGRRFRLAHIVFGRDIIEVA 161 Query: 60 LAR--------TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPY 110 R ++ + G T+E+D +RRD T+NAL + + + D + Sbjct: 162 TFRGHHHQVNTSKNIAEQSEEGMLLRDNVYGTIEEDAERRDFTVNALYYNIKDFSLHDFH 221 Query: 111 NGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 GL DL L + + EDP+R+LR RFAA+ LG I+D + + + A Sbjct: 222 GGLNDLAAGKLELIGDPETRYREDPVRMLRAVRFAAK---LGLTISDRSAEPISRL--AP 276 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 L+ + R+++ET + +Q+LR G + LFP+ L + + ++ Sbjct: 277 LLQDIPSARLFEETIKLFLAGHALSTYQLLRKFGLFQQLFPQAAKLLTPDNNSAYERFLE 336 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDL----GKGLTPPELWPRHHGHGPAGVKLVEQ 283 + +A +ATL + + ++ P A + +EQ Sbjct: 337 KAL-ANSDKRVATEQPVTPTFFYATLLWGVVAMRQREISNESNLPYLDSMQMAMNEAIEQ 395 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK 321 R+ +P R + + + + + + Sbjct: 396 QIHRVAIPRRFTSDVREIWLLQERLPRYSGKRAEKLFA 433 >UniRef50_Q04F51 tRNA nucleotidyltransferase/poly(A) polymerase n=2 Tax=Oenococcus oeni RepID=Q04F51_OENOB Length = 399 Score = 200 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 65/213 (30%), Positives = 99/213 (46%), Gaps = 16/213 (7%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY---QQVGRDFPV--FLHPQTHE 56 + Y VGG+VRDA+L P+ D D + + P EM G Sbjct: 25 QAYFVGGSVRDAILRRPIHDVD-ITTDALPNEMKRIFKTADNYAGEKHGTDLVFLNGKKY 83 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E R + K + L++DL RRD TINA A + G++ D ++GL DL Sbjct: 84 EVTTFRIDGKYLDNRHPKNVSFTKN--LKEDLSRRDFTINAFAMNQEGKLFDYFSGLNDL 141 Query: 117 QNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + +++R V A F ED LR+LR RF+++ L F+I +ETL + + L + Sbjct: 142 KKKIIRTVGDAKQRFSEDALRILRAFRFSSQ---LDFKIEEETLRASQMIKE--NLNDIA 196 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVL 206 ER++ E L +NPQ + + D G + L Sbjct: 197 TERIFVEFSKLLAGKNPQRSLRQMYDLGIVDFL 229 >UniRef50_A5N3S2 TRNA nucleotidyltransferase-related protein n=3 Tax=Clostridium RepID=A5N3S2_CLOK5 Length = 464 Score = 200 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 88/405 (21%), Positives = 161/405 (39%), Gaps = 58/405 (14%) Query: 2 KIYLVGGAVRDALLGLP--VKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYA 59 ++YLVGG +R+ L+ + KD D+V G E + + + FP+ E + Sbjct: 21 ELYLVGGYIRNKLMNIASQPKDADFVFNGD-IHEFISKLQNKGYKFFPI------KESVS 73 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQN 118 + R + ++E+DL+ RD TINALA + +IIDP+ G +Q+ Sbjct: 74 IYRCIKDK----NKIDVSLMKGNSIEEDLENRDFTINALALRFSDNKIIDPFYGRKAIQS 129 Query: 119 RLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R+L++V+ + EDP R+LR RF LG ET + + ++ L ERV Sbjct: 130 RILKNVTDRSLEEDPCRILRGIRFC---ITLGMHFNLETENNIEKFK--DKIMDLPKERV 184 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH------ 231 + E + F++L + G L+ + P I+ + K+H E D H Sbjct: 185 FNEFMLIIENDKYGRAFEILDNYGILKNIVPYIEESKTI-GKCKYHVE-DVFTHLNLTYG 242 Query: 232 ----------TLMTLSMAAMLSP--QVDVR----FATLCHDLGKGLTPPELWPR--HHGH 273 L L ++ + + + ++ A HD+GK ++ + H H Sbjct: 243 VFKDILNGSINLQNLDISKLDTKMGEFTLKEYAALACFLHDIGKYEVYKKVGNKVSFHKH 302 Query: 274 GPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDL----IHTFPMLNPKTIVKLFDSIDAW 329 G + C +++ + + E H + K K F+ D + Sbjct: 303 EIKGAAICRDFCNYMKLSKKAVKYIENIVEGHMYPLNIFTNKTVNRKKAFYKFFNKYDGY 362 Query: 330 RKPQRVEQLALTSEADVRG-RTGFESADYPQG--RWLREAWEVAQ 371 V ++ +T+ D + E D G ++ + + + Sbjct: 363 -----VVEIIITAFCDNCATKMLLEIKDKNLGFKEFIEQMLKEYK 402 >UniRef50_B8FTI8 Polynucleotide adenylyltransferase region n=2 Tax=Desulfitobacterium hafniense RepID=B8FTI8_DESHD Length = 529 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 128/260 (49%), Gaps = 26/260 (10%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALART 63 Y+VGG VRD LL P KD D ++ P E L+ ++ G + + ++ Sbjct: 19 YIVGGTVRDHLLNRPGKDVDGIIP--IPLEELEKHLREWG-----YHPLKIGAKHQTLSV 71 Query: 64 ERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQNRLLR 122 ++ F D LE D RRD TINA+ QD GE+IDP G DL+N+LLR Sbjct: 72 FQQGQRMDINF-----FDGDLEADALRRDFTINAVFQDARTGELIDPLQGREDLENKLLR 126 Query: 123 HVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 F EDP+R+LR+ RF+ +Y G I ++T + + EL+H+ ER + Sbjct: 127 ACGNPWERFREDPVRILRMVRFSVQY---GMDIEEDTFRSAQSL--LPELKHVASERTSE 181 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMA 239 E LT +P ++L + G L + PE+ L G+ ++H + D HTL L Sbjct: 182 ELGRILTLADPAAGIRLLNELGYLTLYLPELVRLQGLAQN-RYHTK-DAWEHTLQVL--- 236 Query: 240 AMLSPQVDVRFATLCHDLGK 259 A PQ +R A L HDLGK Sbjct: 237 ANTPPQPILRLAGLFHDLGK 256 >UniRef50_A5G663 Polynucleotide adenylyltransferase region n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G663_GEOUR Length = 450 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 80/235 (34%), Positives = 108/235 (45%), Gaps = 17/235 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +K YLVGG VRD LLG +KD D+ + G+ E+ + +G F EE Sbjct: 26 VKAYLVGGGVRDLLLGRRLKDLDFALTGAC-AELPRRFAKSIGGSF-----FWLDEERLQ 79 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGE---IIDPYNGLGDLQ 117 R RK G G F T+E+DL +RD TINALA G +IDP G DLQ Sbjct: 80 GRVVRKGGDGVLTFDFAPQRGETIEEDLSQRDFTINALALPLAGGKYALIDPTGGFSDLQ 139 Query: 118 NRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 ++R SP +F +DPLR+LR RFAA LGF I + + + + LE + ER Sbjct: 140 KGIIRACSPASFSDDPLRLLRAVRFAA---TLGFAIDEASRQTI--TMESALLERVAGER 194 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 V E L + L D G L + P + +FG + + H Sbjct: 195 VRDELFQILAAPGIETSLNALLDSGLLGQIVPLV--MFGAGSLPTAEERRSSVEH 247 >UniRef50_B5JS56 Poly(A) polymerase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JS56_9GAMM Length = 434 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 90/377 (23%), Positives = 137/377 (36%), Gaps = 40/377 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFP--VFLHPQTHEE 57 + YLVGG VRD L+GL KD D V +TP E+ L + VGR F L + E Sbjct: 41 EAYLVGGCVRDLLIGLRPKDFD-VATSATPDEVKALFRNCRLVGRRFRLAHILLGRDFIE 99 Query: 58 YALARTERKS-------GSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGE-IIDP 109 A R ++S +G +LE D RRD ++NAL D E I+D Sbjct: 100 VATFRAGQESAGKKQAVAHSDSGRILSDNVYGSLEQDAFRRDFSVNALYFDVRDESIVDY 159 Query: 110 YNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 + D++ R LR + + EDP+R+LR RFAA+ LGF I T A +RE++ Sbjct: 160 VGAMADIEARQLRLIGDPDTRYREDPVRMLRAVRFAAK---LGFSIEPHTEAPIRELS-- 214 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 LE + P R++ E L + + L LR L P W + Sbjct: 215 DHLEDIPPARLFDEVIKLLQSGHGVASLDGLWQHDLLRYLLPMTYGSLLTERGDHWRRML 274 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGK-------GLTPPELWPRHHGHGPAGVK 279 + ++ +A S +A L + G P + P A + Sbjct: 275 EQALNNTDA-RLAQGKSTNPAFLYAVLLWPPLREWLIETGGAMPEDGAPPVMQIQEAANE 333 Query: 280 LVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF-----------PMLNPKTIVKLFDSIDA 328 + ++ +P + R + + + L Sbjct: 334 IFDRQIHYTAIPKRFSQMIRDMWSLQHKLENYGGGRAFGLLANKRFRAAYDFLLLREEMG 393 Query: 329 WRKPQRVEQLALTSEAD 345 +R E D Sbjct: 394 ENTKERANFWTQIQELD 410 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q65Q41 Phosphatase n=50 Tax=Gammaproteobacteria RepID=C... 459 e-128 UniRef50_C6N613 tRNA nucleotidyltransferase n=2 Tax=Legionella R... 436 e-121 UniRef50_Q1LSL7 Phosphatase n=12 Tax=Gammaproteobacteria RepID=C... 436 e-121 UniRef50_A1W3D0 Phosphatase n=492 Tax=cellular organisms RepID=C... 423 e-117 UniRef50_Q7U350 CCA-adding enzyme n=2 Tax=Candidatus Blochmannia... 407 e-112 UniRef50_A8PL05 Multifunctional CCA protein n=1 Tax=Rickettsiell... 401 e-110 UniRef50_A3NQD4 Phosphatase n=74 Tax=Bacteria RepID=CCA_BURP0 399 e-109 UniRef50_A6FG51 Putative tRNA nucleotidyltransferase n=1 Tax=Mor... 386 e-105 UniRef50_Q3IK69 tRNA nucleotidyl transferase n=2 Tax=Alteromonad... 386 e-105 UniRef50_Q8D2W4 CCA-adding enzyme n=1 Tax=Wigglesworthia glossin... 379 e-103 UniRef50_Q125I3 Metal dependent phosphohydrolase n=2 Tax=Proteob... 374 e-102 UniRef50_A6VN94 CCA-adding enzyme n=4 Tax=Pasteurellaceae RepID=... 373 e-102 UniRef50_B9XMC7 Polynucleotide adenylyltransferase/metal depende... 362 1e-98 UniRef50_C6PT81 Polynucleotide adenylyltransferase/metal depende... 359 9e-98 UniRef50_B3DZP1 tRNA nucleotidyltransferase/poly(A) polymerase n... 358 2e-97 UniRef50_Q058D0 CCA-adding enzyme n=2 Tax=Buchnera aphidicola Re... 357 4e-97 UniRef50_B8D8L9 CCA-adding enzyme n=4 Tax=Buchnera aphidicola Re... 357 4e-97 UniRef50_Q1IG27 CCA-adding enzyme n=7 Tax=Gammaproteobacteria Re... 351 3e-95 UniRef50_B1KWG6 PolyA polymerase family protein n=16 Tax=Clostri... 351 4e-95 UniRef50_A5Z8C9 Putative uncharacterized protein n=1 Tax=Eubacte... 348 2e-94 UniRef50_A8MJB7 Polynucleotide adenylyltransferase/metal depende... 348 3e-94 UniRef50_C9XLQ0 Putative poly(A) polymerase n=6 Tax=Clostridium ... 347 6e-94 UniRef50_B4RVV4 CCA-adding enzyme n=2 Tax=Alteromonas macleodii ... 346 1e-93 UniRef50_B2UM12 Polynucleotide adenylyltransferase/metal depende... 342 2e-92 UniRef50_Q73NW9 PolyA polymerase family protein n=1 Tax=Treponem... 341 4e-92 UniRef50_Q1Q5Z9 Similar to poly(A) polymerase n=2 Tax=Candidatus... 340 5e-92 UniRef50_C1F9R3 tRNA nucleotidyltransferase/poly(A) polymerase f... 338 3e-91 UniRef50_A9KEZ9 CCA-adding enzyme n=6 Tax=Coxiella burnetii RepI... 337 5e-91 UniRef50_C6DY30 Poly A polymerase family protein n=2 Tax=Clostri... 337 5e-91 UniRef50_C8PQT7 tRNA adenylyltransferase n=1 Tax=Treponema vince... 336 7e-91 UniRef50_B8I4X8 Polynucleotide adenylyltransferase/metal depende... 336 9e-91 UniRef50_Q1IUE8 Metal dependent phosphohydrolase n=1 Tax=Candida... 336 1e-90 UniRef50_Q2BK09 TRNA nucleotidyl transferase n=1 Tax=Neptuniibac... 335 2e-90 UniRef50_Q1QC26 Polynucleotide adenylyltransferase region n=2 Ta... 333 6e-90 UniRef50_A5WEX7 tRNA cytidylyltransferase n=1 Tax=Psychrobacter ... 333 8e-90 UniRef50_A3WPG7 TRNA nucleotidyltransferase n=1 Tax=Idiomarina b... 332 1e-89 UniRef50_Q5QY23 CCA-adding enzyme n=1 Tax=Idiomarina loihiensis ... 331 3e-89 UniRef50_D1VT34 tRNA adenylyltransferase n=1 Tax=Peptoniphilus l... 331 4e-89 UniRef50_A1U5G5 CCA-adding enzyme n=3 Tax=Alteromonadales RepID=... 330 5e-89 UniRef50_C4GD15 Putative uncharacterized protein n=1 Tax=Shuttle... 329 1e-88 UniRef50_A6VU49 Polynucleotide adenylyltransferase region n=2 Ta... 329 1e-88 UniRef50_UPI0001C37B0D poly A polymerase family protein n=1 Tax=... 329 1e-88 UniRef50_UPI0000E0E587 tRNA nucleotidyltransferase n=1 Tax=Rhodo... 328 2e-88 UniRef50_C0R197 PolyA polymerase n=2 Tax=Brachyspira RepID=C0R19... 327 3e-88 UniRef50_UPI0001BC63FF Poly(A) polymerase n=3 Tax=Fusobacterium ... 327 4e-88 UniRef50_C1IAF4 PolyA polymerase n=1 Tax=Clostridium sp. 7_2_43F... 325 2e-87 UniRef50_A0Z6Y3 TRNA nucleotidyltransferase, putative n=2 Tax=un... 325 2e-87 UniRef50_A0Y839 TRNA nucleotidyltransferase, putative n=1 Tax=ma... 323 9e-87 UniRef50_C7MMX1 Uncharacterized domain HDIG-containing protein n... 322 2e-86 UniRef50_Q7P2R0 POLY(A) POLYMERASE n=10 Tax=Fusobacterium RepID=... 322 2e-86 UniRef50_Q1QZ27 Polynucleotide adenylyltransferase region n=1 Ta... 321 2e-86 UniRef50_B5JXP2 tRNA nucleotidyltransferase n=1 Tax=gamma proteo... 321 4e-86 UniRef50_C8PZE9 Multifunctional CCA protein n=1 Tax=Enhydrobacte... 320 5e-86 UniRef50_A3DF92 Metal dependent phosphohydrolase n=3 Tax=Clostri... 319 8e-86 UniRef50_B4CZL9 tRNA adenylyltransferase n=1 Tax=Chthoniobacter ... 319 9e-86 UniRef50_D1CJ19 Polynucleotide adenylyltransferase/metal depende... 319 1e-85 UniRef50_Q2LST9 Poly A polymerase n=1 Tax=Syntrophus aciditrophi... 317 4e-85 UniRef50_C1XKS4 Uncharacterized domain HDIG-containing protein n... 317 6e-85 UniRef50_C7RG10 Polynucleotide adenylyltransferase/metal depende... 314 3e-84 UniRef50_C8W673 Polynucleotide adenylyltransferase/metal depende... 314 4e-84 UniRef50_A9KL25 Polynucleotide adenylyltransferase/metal depende... 314 4e-84 UniRef50_Q0F3A3 TRNA nucleotidyltransferase n=1 Tax=Mariprofundu... 313 8e-84 UniRef50_D1AKE0 Polynucleotide adenylyltransferase/metal depende... 313 8e-84 UniRef50_B1I1S2 Metal dependent phosphohydrolase n=2 Tax=Clostri... 313 9e-84 UniRef50_C8WIX9 Polynucleotide adenylyltransferase/metal depende... 311 4e-83 UniRef50_A8REM2 Putative uncharacterized protein n=1 Tax=Eubacte... 310 7e-83 UniRef50_A6Q8W0 Polynucleotide adenylyltransferase/metal-depende... 309 1e-82 UniRef50_B1CAN8 Putative uncharacterized protein n=1 Tax=Anaerof... 308 2e-82 UniRef50_A5UUL6 Polynucleotide adenylyltransferase/metal depende... 308 3e-82 UniRef50_D1N4S4 Polynucleotide adenylyltransferase/metal depende... 307 4e-82 UniRef50_C7N8U3 Polynucleotide adenylyltransferase/metal depende... 307 4e-82 UniRef50_C0EC94 Putative uncharacterized protein n=1 Tax=Clostri... 307 5e-82 UniRef50_A4E6N1 Putative uncharacterized protein n=2 Tax=Collins... 306 1e-81 UniRef50_A9F087 Cca protein n=2 Tax=Myxococcales RepID=A9F087_SORC5 306 1e-81 UniRef50_B0MLX5 Putative uncharacterized protein n=1 Tax=Eubacte... 306 1e-81 UniRef50_A5EXT8 TRNA nucleotidyltransferase n=1 Tax=Dichelobacte... 305 2e-81 UniRef50_C6X292 tRNA nucleotidyltransferase n=24 Tax=Bacteroidet... 304 3e-81 UniRef50_A6P236 Putative uncharacterized protein n=1 Tax=Bactero... 304 3e-81 UniRef50_C3CTV2 Polynucleotide adenylyltransferase/metal-depende... 304 4e-81 UniRef50_UPI000196A9FA hypothetical protein CATMIT_01143 n=1 Tax... 304 5e-81 UniRef50_C7N377 tRNA nucleotidyltransferase/poly(A) polymerase n... 302 1e-80 UniRef50_C4V4H3 Possible tRNA adenylyltransferase n=1 Tax=Seleno... 302 1e-80 UniRef50_C9LM50 PolyA polymerase n=1 Tax=Dialister invisus DSM 1... 302 2e-80 UniRef50_Q466Z1 tRNA nucleotidyltransferase n=1 Tax=Methanosarci... 301 4e-80 UniRef50_C8W9Z0 Metal dependent phosphohydrolase n=1 Tax=Atopobi... 301 4e-80 UniRef50_A0L904 Polynucleotide adenylyltransferase region n=1 Ta... 301 5e-80 UniRef50_C5RPI7 tRNA adenylyltransferase n=1 Tax=Clostridium cel... 299 1e-79 UniRef50_Q47K87 Metal-dependent phosphohydrolase n=143 Tax=Actin... 299 2e-79 UniRef50_C9KIT0 tRNA nucleotidyltransferase n=3 Tax=Veillonellac... 298 3e-79 UniRef50_B7CE33 Putative uncharacterized protein n=1 Tax=Eubacte... 298 3e-79 UniRef50_B1R1E7 Cca-adding enzyme n=2 Tax=Clostridium butyricum ... 298 3e-79 UniRef50_A0M3Q3 TRNA nucleotidyltransferase n=19 Tax=Bacteroidet... 297 6e-79 UniRef50_B9CKT6 Cca-adding enzyme n=1 Tax=Atopobium rimae ATCC 4... 296 1e-78 UniRef50_C4F914 Putative uncharacterized protein n=1 Tax=Collins... 296 1e-78 UniRef50_C8N8W3 Multifunctional CCA protein n=1 Tax=Cardiobacter... 296 2e-78 UniRef50_C0WDS1 Metal-dependent phosphohydrolase n=1 Tax=Acidami... 295 2e-78 UniRef50_D2RM72 Polynucleotide adenylyltransferase/metal depende... 294 3e-78 UniRef50_C9L4X1 tRNA nucleotidyltransferase/poly(A) polymerase f... 292 1e-77 UniRef50_C7LRX4 Polynucleotide adenylyltransferase/metal depende... 292 2e-77 UniRef50_A5FA68 Polynucleotide adenylyltransferase/metal depende... 291 2e-77 UniRef50_C5ZY12 tRNA nucleotidyl transferase n=3 Tax=Helicobacte... 290 5e-77 UniRef50_B0AC07 Putative uncharacterized protein n=1 Tax=Clostri... 290 6e-77 UniRef50_A6GQU7 Polynucleotide adenylyltransferase region:Metal-... 289 1e-76 UniRef50_D1BP90 Polynucleotide adenylyltransferase/metal depende... 289 2e-76 UniRef50_UPI0000E87B3C tRNA nucleotidyl transferase, putative n=... 288 2e-76 UniRef50_A6CGS1 Metal dependent phosphohydrolase n=1 Tax=Plancto... 287 5e-76 UniRef50_Q3EZB5 TRNA nucleotidyltransferase n=2 Tax=Bacillus thu... 287 7e-76 UniRef50_C6JPJ4 Poly(A) polymerase n=1 Tax=Fusobacterium varium ... 286 8e-76 UniRef50_C6NV27 tRNA nucleotidyltransferase n=1 Tax=Acidithiobac... 284 3e-75 UniRef50_D1C7Z9 Polynucleotide adenylyltransferase/metal depende... 284 3e-75 UniRef50_B4S8E4 Polynucleotide adenylyltransferase/metal depende... 284 3e-75 UniRef50_A2VMT0 Poly(A) polymerase pcnA n=5 Tax=Corynebacterinea... 283 9e-75 UniRef50_B6G1N2 Putative uncharacterized protein n=1 Tax=Clostri... 282 2e-74 UniRef50_B5JPR9 tRNA nucleotidyltransferase/poly(A) polymerase f... 282 2e-74 UniRef50_D1PLQ0 Poly(A) polymerase n=1 Tax=Subdoligranulum varia... 282 2e-74 UniRef50_C3PKZ9 tRNA nucleotidyltransferase n=2 Tax=Corynebacter... 282 2e-74 UniRef50_D1RE93 Multifunctional CCA protein n=1 Tax=Legionella l... 281 3e-74 UniRef50_A8S304 Putative uncharacterized protein n=2 Tax=Clostri... 280 6e-74 UniRef50_Q0TV45 PolyA polymerase family protein n=9 Tax=Clostrid... 279 1e-73 UniRef50_D2L6A0 Polynucleotide adenylyltransferase/metal depende... 279 2e-73 UniRef50_B1GZF8 CCA-adding tRNA nucleotidyltransferase n=1 Tax=u... 279 2e-73 UniRef50_A1AVM9 Polynucleotide adenylyltransferase region n=3 Ta... 278 2e-73 UniRef50_B0N1P8 Putative uncharacterized protein n=3 Tax=Bacteri... 278 3e-73 UniRef50_C0A6X1 Polynucleotide adenylyltransferase region n=1 Ta... 277 4e-73 UniRef50_C6BVC7 Polynucleotide adenylyltransferase region n=1 Ta... 277 5e-73 UniRef50_C4LGI1 tRNA nucleotidyltransferase n=3 Tax=Corynebacter... 276 8e-73 UniRef50_C5ESK6 Putative uncharacterized protein n=1 Tax=Clostri... 275 1e-72 UniRef50_B8QTX7 tRNA nucleotidyltransferase/poly(A) polymerase n... 275 2e-72 UniRef50_Q1ASB2 Polynucleotide adenylyltransferase region n=1 Ta... 274 4e-72 UniRef50_C3WFG0 Poly(A) polymerase n=1 Tax=Fusobacterium mortife... 274 5e-72 UniRef50_C4XGZ8 Putative tRNA nucleotidyltransferase n=1 Tax=Des... 272 1e-71 UniRef50_C7N4V8 tRNA nucleotidyltransferase/poly(A) polymerase n... 272 1e-71 UniRef50_D1PZ77 PolyA polymerase n=1 Tax=Prevotella bergensis DS... 272 2e-71 UniRef50_B6BWF7 CCA-adding enzyme n=1 Tax=beta proteobacterium K... 270 5e-71 UniRef50_D1Y2S7 Multifunctional CCA protein n=1 Tax=Pyramidobact... 269 1e-70 UniRef50_C4G3Z5 Putative uncharacterized protein n=1 Tax=Abiotro... 269 1e-70 UniRef50_A4XLP3 tRNA adenylyltransferase n=2 Tax=Clostridia RepI... 269 2e-70 UniRef50_B1ZUE5 Polynucleotide adenylyltransferase region n=1 Ta... 269 2e-70 UniRef50_C4Z1D8 tRNA nucleotidyltransferase (CCA-adding enzyme) ... 268 3e-70 UniRef50_B2S2L8 Polynucleotide adenylyltransferase n=2 Tax=Trepo... 268 3e-70 UniRef50_B8HHS6 Polynucleotide adenylyltransferase/metal depende... 266 1e-69 UniRef50_UPI00016C045F putative poly(A) polymerase n=1 Tax=Epulo... 266 1e-69 UniRef50_A4T0E4 Polynucleotide adenylyltransferase region n=2 Ta... 265 1e-69 UniRef50_A1UTI1 TRNA-nucleotidyltransferase n=4 Tax=Rhizobiales ... 265 2e-69 UniRef50_UPI000197324F tRNA nucleotidyltransferase/poly(A) polym... 265 2e-69 UniRef50_B8FBG8 Polynucleotide adenylyltransferase/metal depende... 264 3e-69 UniRef50_Q4JSD7 TRNA nucleotidyltransferase n=4 Tax=Actinomyceta... 262 1e-68 UniRef50_A0Q8A2 CCA-adding enzyme n=18 Tax=Francisella RepID=CCA... 262 2e-68 UniRef50_Q4K5Y6 Poly(A) polymerase n=49 Tax=cellular organisms R... 261 3e-68 UniRef50_A8YV39 CCA-adding enzyme n=19 Tax=Lactobacillus RepID=C... 260 5e-68 UniRef50_Q7U391 CCA-adding enzyme n=5 Tax=Bordetella RepID=CCA_B... 260 7e-68 UniRef50_UPI00016C46B5 metal dependent phosphohydrolase n=1 Tax=... 260 9e-68 UniRef50_D1U5B9 Polynucleotide adenylyltransferase/metal depende... 259 2e-67 UniRef50_A8GIZ2 Poly(A) polymerase n=61 Tax=Gammaproteobacteria ... 258 2e-67 UniRef50_Q8RJX5 Polynucleotide adenyltransferase n=1 Tax=Stigmat... 258 2e-67 UniRef50_D1VN96 Polynucleotide adenylyltransferase/metal depende... 257 5e-67 UniRef50_P0ABF3 Poly(A) polymerase n=179 Tax=Gammaproteobacteria... 257 6e-67 UniRef50_C0GPD7 Polynucleotide adenylyltransferase region n=1 Ta... 256 1e-66 UniRef50_Q72B04 tRNA nucleotidyltransferase, putative n=4 Tax=De... 255 2e-66 UniRef50_Q5E2T5 Poly(A) polymerase I n=6 Tax=Gammaproteobacteria... 255 2e-66 UniRef50_C8P0Q2 tRNA adenylyltransferase n=1 Tax=Erysipelothrix ... 255 2e-66 UniRef50_A4IQ63 CCA-adding enzyme n=11 Tax=Bacillaceae RepID=CCA... 255 2e-66 UniRef50_B7VK01 Poly(A) polymerase n=23 Tax=Bacteria RepID=B7VK0... 255 3e-66 UniRef50_A1AQP2 Metal dependent phosphohydrolase n=4 Tax=Desulfu... 255 3e-66 UniRef50_Q0AVZ3 tRNA nucleotidyltransferase (CCA-adding enzyme) ... 254 3e-66 UniRef50_A6W2I1 Poly(A) polymerase n=6 Tax=Oceanospirillales Rep... 254 4e-66 UniRef50_C4FTJ0 Putative uncharacterized protein n=1 Tax=Catonel... 254 5e-66 UniRef50_A8ZWH5 Polynucleotide adenylyltransferase/metal depende... 254 6e-66 UniRef50_Q2RZU6 TRNA nucleotidyltransferase/poly(A) polymerase f... 254 6e-66 UniRef50_Q67QK4 Putative RNA nucleotidyltransferase n=1 Tax=Symb... 253 7e-66 UniRef50_C6ACD6 tRNA nucleotidyltransferase n=2 Tax=Bartonella R... 253 7e-66 UniRef50_C1ZGH1 tRNA nucleotidyltransferase/poly(A) polymerase n... 253 8e-66 UniRef50_C0ZCG8 Probable tRNA CCA-adding enzyme n=1 Tax=Brevibac... 252 2e-65 UniRef50_A4A0Y5 Poly A polymerase n=1 Tax=Blastopirellula marina... 252 3e-65 UniRef50_Q3A9F0 PolyA polymerase/tRNA nucleotidyltransferase fam... 251 3e-65 UniRef50_D0KJD5 Poly(A) polymerase n=10 Tax=Enterobacteriaceae R... 251 4e-65 UniRef50_Q1WU19 CCA-adding enzyme n=30 Tax=Lactobacillales RepID... 251 4e-65 UniRef50_C9R471 Poly(A) polymerase (PAP) (Plasmid copy number pr... 250 1e-64 UniRef50_C5CF12 CBS domain containing protein n=1 Tax=Kosmotoga ... 249 1e-64 UniRef50_C0WTJ5 tRNA nucleotidyltransferase/poly(A) polymerase n... 249 1e-64 UniRef50_C7M1E9 Polynucleotide adenylyltransferase/metal depende... 249 1e-64 UniRef50_A4BLN3 PolyA polymerase n=2 Tax=Gammaproteobacteria Rep... 248 3e-64 UniRef50_Q31FF3 Poly(A) polymerase n=1 Tax=Thiomicrospira crunog... 248 3e-64 UniRef50_B0K130 Polynucleotide adenylyltransferase/metal depende... 248 3e-64 UniRef50_Q1YQK0 Poly(A) polymerase n=1 Tax=gamma proteobacterium... 248 3e-64 UniRef50_C8X424 tRNA adenylyltransferase n=1 Tax=Desulfohalobium... 247 4e-64 UniRef50_Q7VFG8 Poly(A) polymerase n=1 Tax=Helicobacter hepaticu... 247 6e-64 UniRef50_C0M731 CCA-adding enzyme n=4 Tax=Streptococcus dysgalac... 247 6e-64 UniRef50_B8KRY4 Poly(A) polymerase n=1 Tax=gamma proteobacterium... 247 7e-64 UniRef50_C7LTC9 Poly(A) polymerase n=1 Tax=Desulfomicrobium bacu... 246 1e-63 UniRef50_A8SDN5 Putative uncharacterized protein n=1 Tax=Faecali... 246 1e-63 UniRef50_B1MYC1 CCA-adding enzyme n=7 Tax=Lactobacillales RepID=... 246 1e-63 UniRef50_Q834S5 CCA-adding enzyme n=40 Tax=Bacilli RepID=CCA_ENTFA 246 1e-63 UniRef50_D0B9N2 Polynucleotide adenylyltransferase n=54 Tax=Rhiz... 245 2e-63 UniRef50_B9Y2T0 Putative uncharacterized protein n=1 Tax=Holdema... 245 2e-63 UniRef50_Q39QS9 Poly(A) polymerase, PcnB n=5 Tax=Desulfuromonada... 245 2e-63 UniRef50_Q043S5 CCA-adding enzyme n=7 Tax=Lactobacillus RepID=CC... 245 3e-63 UniRef50_B8EDX6 Poly(A) polymerase n=5 Tax=Shewanella RepID=B8ED... 244 4e-63 UniRef50_C2E651 tRNA CCA-pyrophosphorylase n=1 Tax=Lactobacillus... 244 5e-63 UniRef50_C0GDZ3 CBS domain containing protein n=1 Tax=Dethiobact... 244 6e-63 UniRef50_Q5ZVA2 Poly(A) polymerase I n=4 Tax=Legionella pneumoph... 243 9e-63 UniRef50_B2A4Y6 CBS domain containing protein n=1 Tax=Natranaero... 243 9e-63 UniRef50_C4L927 Poly(A) polymerase n=2 Tax=Gammaproteobacteria R... 242 1e-62 UniRef50_C7H286 Metal dependent phosphohydrolase n=1 Tax=Faecali... 242 1e-62 UniRef50_B5JS56 Poly(A) polymerase n=1 Tax=gamma proteobacterium... 242 2e-62 UniRef50_B0BS81 PolyA polymerase n=23 Tax=Gammaproteobacteria Re... 242 3e-62 UniRef50_A4J3L2 Polynucleotide adenylyltransferase region n=4 Ta... 241 3e-62 UniRef50_A6NVT9 Putative uncharacterized protein n=1 Tax=Bactero... 241 3e-62 UniRef50_B4KCB6 GI23728 n=11 Tax=Coelomata RepID=B4KCB6_DROMO 241 4e-62 UniRef50_C6N7M1 Poly(A) polymerase (PAP) (Plasmid copy number pr... 241 4e-62 UniRef50_C6E493 Polynucleotide adenylyltransferase/metal depende... 240 5e-62 UniRef50_B5YFC2 Poly A polymerase, putative n=2 Tax=Dictyoglomus... 240 6e-62 UniRef50_A7RRV1 Predicted protein n=2 Tax=Metazoa RepID=A7RRV1_N... 240 8e-62 UniRef50_Q2RXH4 Polynucleotide adenylyltransferase region n=1 Ta... 240 8e-62 UniRef50_Q76YD7 Putative uncharacterized protein n=1 Tax=Aeromon... 240 9e-62 UniRef50_Q96Q11 tRNA-nucleotidyltransferase 1, mitochondrial n=3... 240 1e-61 UniRef50_Q6MM27 Poly A polymerase n=1 Tax=Bdellovibrio bacteriov... 239 1e-61 UniRef50_A4W0U8 CCA-adding enzyme n=68 Tax=Streptococcaceae RepI... 239 2e-61 UniRef50_A6CRX0 tRNA nucleotidyltransferase n=1 Tax=Bacillus sp.... 238 2e-61 UniRef50_D2R1L2 tRNA adenylyltransferase n=1 Tax=Pirellula stale... 238 2e-61 UniRef50_B0T8C7 Polynucleotide adenylyltransferase region n=6 Ta... 238 2e-61 UniRef50_Q7UWK0 Poly A polymerase n=1 Tax=Rhodopirellula baltica... 238 2e-61 UniRef50_C8NF31 Poly A polymerase n=2 Tax=Granulicatella RepID=C... 237 4e-61 UniRef50_Q2B3W5 TRNA nucleotidyltransferase n=1 Tax=Bacillus sp.... 237 5e-61 UniRef50_B9R2T5 tRNA nucleotidyltransferase/poly(A) polymerase f... 237 6e-61 UniRef50_Q9VNH2 CG2100 n=12 Tax=Diptera RepID=Q9VNH2_DROME 237 9e-61 UniRef50_A0AK10 CCA-adding enzyme n=4 Tax=Listeria RepID=CCA_LISW6 236 1e-60 UniRef50_Q6AJ41 Related to poly(A) polymerase n=1 Tax=Desulfotal... 236 1e-60 UniRef50_Q0AX27 PolyA polymerase family protein n=1 Tax=Syntroph... 236 1e-60 UniRef50_UPI00019275C7 PREDICTED: similar to predicted protein n... 236 1e-60 UniRef50_A1HMM1 Polynucleotide adenylyltransferase n=1 Tax=Therm... 236 1e-60 UniRef50_A5IJ71 CBS domain containing protein n=5 Tax=Thermotoga... 236 1e-60 UniRef50_C6NWQ8 Poly(A) polymerase n=1 Tax=Acidithiobacillus cal... 236 1e-60 UniRef50_Q2VZL3 tRNA nucleotidyltransferase/poly(A) polymerase n... 236 1e-60 UniRef50_C0QG74 tRNA nucleotidyltransferase/poly(A) polymerase n... 236 1e-60 UniRef50_A0LF07 Polynucleotide adenylyltransferase region n=1 Ta... 236 1e-60 UniRef50_B8FEB0 Polynucleotide adenylyltransferase region n=1 Ta... 235 3e-60 UniRef50_C6XPE6 Polynucleotide adenylyltransferase region n=1 Ta... 235 3e-60 UniRef50_C6V5C8 Poly A polymerase family protein n=2 Tax=Neorick... 235 3e-60 UniRef50_C9M6L8 PolyA polymerase family protein n=1 Tax=Jonquete... 235 3e-60 UniRef50_A8FEH9 CCA-adding enzyme n=5 Tax=Bacillus RepID=CCA_BACP2 234 3e-60 UniRef50_B0B8T0 PolyA polymerase n=14 Tax=Chlamydiaceae RepID=B0... 234 4e-60 UniRef50_A7VVB9 Putative uncharacterized protein n=1 Tax=Clostri... 234 4e-60 UniRef50_A8UAQ7 Poly A polymerase n=1 Tax=Carnobacterium sp. AT7... 234 5e-60 UniRef50_B1YHR1 Polynucleotide adenylyltransferase region n=1 Ta... 233 6e-60 UniRef50_C6CUG0 Polynucleotide adenylyltransferase region n=1 Ta... 233 7e-60 UniRef50_Q6ASD5 Related to poly(A) polymerase n=1 Tax=Desulfotal... 233 7e-60 UniRef50_A6TJG8 Polynucleotide adenylyltransferase/metal depende... 233 8e-60 UniRef50_Q0FDP1 Poly A polymerase family protein n=1 Tax=Rhodoba... 232 1e-59 UniRef50_Q97M87 PolyA polymerase n=1 Tax=Clostridium acetobutyli... 232 1e-59 Sequences not found previously or not previously below threshold: >UniRef50_Q65Q41 Phosphatase n=50 Tax=Gammaproteobacteria RepID=CCA_MANSM Length = 419 Score = 459 bits (1182), Expect = e-128, Method: Composition-based stats. Identities = 244/415 (58%), Positives = 307/415 (73%), Gaps = 5/415 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ YLVGGAVRD LL LPVKDRDWVVVG+TP+++L GYQQVGRDFPVFLHP+T EEYAL Sbjct: 1 MQTYLVGGAVRDQLLNLPVKDRDWVVVGATPEQLLSLGYQQVGRDFPVFLHPKTKEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG+GYTGF C +P ++LE DL RRDLTINA+AQD+ G+ IDPY G+ DL+NR Sbjct: 61 ARTERKSGAGYTGFICDFSPHISLEQDLIRRDLTINAIAQDNQGKFIDPYEGISDLKNRT 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH+SPAF EDPLRVLRVARFAARY L F IA ET+ALM E+T GEL+ LT ERVW+E Sbjct: 121 LRHISPAFAEDPLRVLRVARFAARYHQLDFSIAPETIALMAEITEKGELQQLTIERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 TE AL +NP+++FQVL GAL++LFPE+ AL+GVP PA++HPEID+ +HT++ L A Sbjct: 181 TEKALKEKNPEIYFQVLLQVGALKILFPELYALYGVPNPAQYHPEIDSFLHTMLVLQQAV 240 Query: 241 MLSPQV-----DVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 L+ VRFA +CHDLGK LTP ++ P H+GH AG++ + L RL+VP + Sbjct: 241 RLTENTEFNKSAVRFAAICHDLGKALTPKDILPHHYGHEKAGIQPIRTLSNRLKVPTYYK 300 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 +LA E+H IH L P+T++KLF+ +D WRKPQR E+L L AD RGRTGFE Sbjct: 301 ELAEFTCEYHSYIHKAFELKPETVIKLFNKLDVWRKPQRFEELMLVCVADTRGRTGFEQT 360 Query: 356 DYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPK 410 YPQ +LR+ ++ A V + V+E GF+ IR+ELTRRR AV + K + P+ Sbjct: 361 AYPQKDYLRQLYQTALQVNVQQVIEDGFEKQGIRDELTRRRTIAVKTKKAEILPR 415 >UniRef50_C6N613 tRNA nucleotidyltransferase n=2 Tax=Legionella RepID=C6N613_9GAMM Length = 425 Score = 436 bits (1122), Expect = e-121, Method: Composition-based stats. Identities = 211/406 (51%), Positives = 270/406 (66%), Gaps = 2/406 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK+YLVGGAVRD LL LPVK+RDWVVVG++P+++L ++QVGRDFPVFLHPQT+EEYAL Sbjct: 16 MKVYLVGGAVRDQLLNLPVKERDWVVVGASPEQLLKQKFRQVGRDFPVFLHPQTNEEYAL 75 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKS GY GF C VTLE+DL RRDLTINA+A D+ G +IDPY G DL NR+ Sbjct: 76 ARTERKSAPGYYGFACDFNRSVTLEEDLARRDLTINAMAMDEQGVLIDPYQGQRDLANRV 135 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH+SPAF EDP+RVLR+ARFAAR+ +LGF +A+ET +LM M GEL HL ERVW+E Sbjct: 136 LRHISPAFAEDPVRVLRLARFAARFHYLGFTVAEETRSLMYSMVTQGELAHLVAERVWQE 195 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 + +L +NP+ F LR C ALRV+ PE+ ALFGVP P ++H EID+G+HTL+ L AA Sbjct: 196 WQRSLEEKNPEQFIITLRSCDALRVILPELQALFGVPNPYRYHHEIDSGVHTLLVLQSAA 255 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 L+ +RFA L HDLGK +P WP H+GH GV ++E LC RLR+PNE R LA + Sbjct: 256 ALTTDPIIRFAALTHDLGKATSPMSNWPSHYGHEARGVPIIESLCLRLRIPNEYRTLATV 315 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 V+ FH +IH L TIV+L + A+R+PQ + + +AD G DY Q Sbjct: 316 VSRFHLMIHRLLELRADTIVRLLEQAYAFRRPQLFYNMLIACQADAEGCG--REIDYQQS 373 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 V + ++ G+ G I+ L + R+A V Sbjct: 374 ALWHHLLAECAKVNVQTIITQGYTGGAIKHALHQHRVACVELILNS 419 >UniRef50_Q1LSL7 Phosphatase n=12 Tax=Gammaproteobacteria RepID=CCA_BAUCH Length = 412 Score = 436 bits (1121), Expect = e-121, Method: Composition-based stats. Identities = 264/413 (63%), Positives = 328/413 (79%), Gaps = 3/413 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD LL +PVK+RDWVV+G+T Q+ML AGYQQVG+DFPVFLHP++HEEYAL Sbjct: 1 MKKYLVGGAVRDRLLQIPVKERDWVVIGTTLQDMLKAGYQQVGKDFPVFLHPKSHEEYAL 60 Query: 61 ARTERKSGSG-YTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 AR E+KS +G YTGFT A+ ++TLE+DLKRRDLTINA+A D+NG +IDPYNG DL R Sbjct: 61 ARIEKKSATGGYTGFTYKASSEITLEEDLKRRDLTINAIACDENGSLIDPYNGQRDLNQR 120 Query: 120 LLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 LRHVS AF EDPLRVLRVARFAA+ A+L FRI ET +M+ M EL L+PER+WK Sbjct: 121 WLRHVSEAFCEDPLRVLRVARFAAQLAYLNFRIVPETRLMMQHMIS--ELPLLSPERIWK 178 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMA 239 ETE AL TR+PQ++FQVLRDCGAL+ LFPEIDALFGVPAPAKWHPEIDTGIHT+MT++MA Sbjct: 179 ETEKALATRDPQIYFQVLRDCGALKTLFPEIDALFGVPAPAKWHPEIDTGIHTMMTVAMA 238 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 A LS + VRFA+LCHD+GKGLTP + WP HHGHGPAG+ LV+ LCQRLRVPN IR+LA Sbjct: 239 ARLSDSIAVRFASLCHDIGKGLTPRDHWPSHHGHGPAGIPLVQSLCQRLRVPNSIRNLAI 298 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 +V E+HDL+H L PKT++KLF +ID WR+P+R+EQ+ + SEAD RGR G+E+ Y Sbjct: 299 IVTEYHDLLHYAVKLKPKTLIKLFYAIDVWRRPERLEQIIIISEADARGRAGYENHFYKP 358 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPKPE 412 G+++REA+ +A S+ V+ G +I E+L + R A+A+WK+Q + Sbjct: 359 GQFIREAYRIASSIMPCQVISHNLTGNKIGEKLRQYRQQAIATWKQQNYESKQ 411 >UniRef50_A1W3D0 Phosphatase n=492 Tax=cellular organisms RepID=CCA_ACISJ Length = 425 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 221/423 (52%), Positives = 276/423 (65%), Gaps = 13/423 (3%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IY+VGGAVRD LLG PV D DWVVVG+TP +M+ GY VGRDFPVFLHP+T EEYAL Sbjct: 1 MQIYMVGGAVRDRLLGRPVNDHDWVVVGATPDDMVARGYLPVGRDFPVFLHPETREEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDPYNGLGDL 116 ARTERKSG GY GF +PDVTLE+DL RRDLTINA+A ++ DPY G DL Sbjct: 61 ARTERKSGRGYRGFVVQTSPDVTLEEDLSRRDLTINAIAASAAWTGAEDLFDPYGGARDL 120 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 Q R+LRHV+ +F EDP+R+LRVARFAAR+ F +A ET+ LMREM H GE +HL PER Sbjct: 121 QARVLRHVTDSFREDPVRILRVARFAARFT--DFTVAPETMQLMREMVHDGEADHLVPER 178 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 VW+E L P F VLRDCGAL V+ PE++ L+GVP ++HPE+DTG+H +M L Sbjct: 179 VWQELARGLMEPQPSRMFDVLRDCGALAVVLPEVERLWGVPQRPEYHPEVDTGVHLMMVL 238 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 MAA L + VRFA L HDLGKG TP ++ PRH GH +L++ +C+RLRVP E R+ Sbjct: 239 DMAAHLQAPLTVRFACLTHDLGKGTTPHDVLPRHIGHEQRSARLLKAVCERLRVPVECRE 298 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 LA +VA H IH L +V+L + DA RKP R++++ L E D RGR GF Sbjct: 299 LADVVAREHGNIHRSGDLGAAALVRLLERCDAIRKPARLDEILLACECDARGRLGFADRP 358 Query: 357 YPQGRWLREAWEVAQSVPTKAVVE----AGFKGVEIREELTRRRIAAVASWK---EQRCP 409 YPQ + A QSV T +V G G ++ E + R+ AVA W Q P Sbjct: 359 YPQRARINAALAAVQSVTTSSVAAHAAQLGLSGPKVGEMIHAARVQAVADWLHATAQPAP 418 Query: 410 KPE 412 +P+ Sbjct: 419 EPQ 421 >UniRef50_Q7U350 CCA-adding enzyme n=2 Tax=Candidatus Blochmannia RepID=CCA_BLOFL Length = 411 Score = 407 bits (1046), Expect = e-112, Method: Composition-based stats. Identities = 194/413 (46%), Positives = 270/413 (65%), Gaps = 3/413 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD+LL LP+ ++DWV+ GS+ QEML GY+QVG+DFPVFLHP++HEEYAL Sbjct: 1 MKKYLVGGAVRDSLLNLPITEKDWVITGSSAQEMLSIGYEQVGKDFPVFLHPKSHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK GSGYTGF C+ P +T+E+DL RRDLTINA+A D NG ++DPYNG D+Q RL Sbjct: 61 ARTERKLGSGYTGFICHTEPSITIEEDLYRRDLTINAMAYDMNGNLLDPYNGQKDIQLRL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRVLRVARFAA+ ++GF IA ET +M M H EL+ L+PERVW E Sbjct: 121 LRHVSNAFYEDPLRVLRVARFAAKLKNIGFTIAIETFEIMTHMIH--ELKSLSPERVWME 178 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI-DTGIHTLMTLSMA 239 T+ AL T NPQV+FQVL+ CGAL++LFPE+D LF +P H + + G T+ LS Sbjct: 179 TKKALITDNPQVYFQVLKKCGALKILFPELDILFTIPQCTTHHSNLMNLGNQTMTRLSNI 238 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 + LS + +R+A LC +LG + P + + + ++ LC RL+VPN I L + Sbjct: 239 SCLSNDLAIRYAILCCNLGSEMNPRKQPLKQLTQKKPQISIINNLCNRLKVPNNILKLTK 298 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 +V ++ ++ L+ + I+ +F + D WR P R+E + +++ + G + + Q Sbjct: 299 IVFMYYHDLYDVTKLSSEMIMTIFQAFDCWRTPTRIELIIKINQSQLLGSKFHINYLFFQ 358 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPKPE 412 LR A+ + ++ +GF G+ I +EL RR+ + WK + + Sbjct: 359 STLLRTAFNETTQIKANDIINSGFSGINISQELYSRRLHVLKHWKNKFLTHKQ 411 >UniRef50_A8PL05 Multifunctional CCA protein n=1 Tax=Rickettsiella grylli RepID=A8PL05_9COXI Length = 399 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 200/405 (49%), Positives = 265/405 (65%), Gaps = 8/405 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IYLVGGAVRD LLG P+K+RD+VVVG++P EML G++ +G+DFPVFLHPQTHEEYAL Sbjct: 1 MEIYLVGGAVRDQLLGFPIKERDYVVVGASPAEMLKQGFRLIGKDFPVFLHPQTHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK G GY GF+CYAAPDVTLE+DLKRRDLTINALAQ +NGEIIDP+ G D++N+L Sbjct: 61 ARTERKIGPGYKGFSCYAAPDVTLEEDLKRRDLTINALAQTNNGEIIDPFQGQKDIENKL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDP+R+LRVARF AR++ GFR+A ET+ALM+ M GE+ L PERVW+E Sbjct: 121 LRHVSPAFSEDPVRILRVARFMARFSSFGFRVAKETMALMKMMVSMGEVHALVPERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 ALT +PQ F + L DCGAL VLFPE+ L A K H + + H L L A Sbjct: 181 FSIALTEPSPQAFIKTLEDCGALAVLFPELYELHTHDASIKVHSQQLSPPHYLSVLEKAV 240 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +L+ +VRFA L DLGKG+ E GV+ + LCQR R+P+ LA + Sbjct: 241 LLTSDPEVRFAALLCDLGKGVANEET--------QKGVQKIRSLCQRYRIPHAYASLAMM 292 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 A +H L H L ++ L + +A ++ ++Q L EAD R +G + Y Q Sbjct: 293 AAAYHLLCHRALALEASSLYHLLEKTNALKQSSCLDQFLLVCEADFRAYSGLDHRVYLQR 352 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKE 405 + A E+ + + + ++G G + ++L RI A++ + + Sbjct: 353 ERVLAAVEIVKKISASELKKSGLMGAALGKKLREHRIQALSDFLQ 397 >UniRef50_A3NQD4 Phosphatase n=74 Tax=Bacteria RepID=CCA_BURP0 Length = 413 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 218/410 (53%), Positives = 274/410 (66%), Gaps = 11/410 (2%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIY VGGA+RDALLGLPV+DRD+VVVG+TP++M ++ VG+DFPVFLHP THEEYAL Sbjct: 1 MKIYAVGGAIRDALLGLPVRDRDYVVVGATPEQMAAQRFRPVGKDFPVFLHPDTHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA--QDDNGEII----DPYNGLG 114 ARTERK+ +GY GF Y APDVTLE DL RRDLTINA+A +G ++ DP+ G Sbjct: 61 ARTERKTAAGYHGFQFYYAPDVTLEQDLVRRDLTINAMAREVSPDGALVGPVVDPFGGQA 120 Query: 115 DLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 DL+ +L RHV AF EDP+R+LRVARFAAR+A F +A +T ALMR M AGE++ L P Sbjct: 121 DLRAKLFRHVGDAFVEDPVRILRVARFAARFAE--FAVAPDTAALMRAMVDAGEVDALVP 178 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ERVW+E L P F VLR+CGAL + PEIDALFGVP A +HPE+DTG+H +M Sbjct: 179 ERVWQELARGLMEAKPSRMFAVLRECGALARILPEIDALFGVPQRADYHPEVDTGVHVMM 238 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + AA + VRFA L HDLGK TP ++ PRH GH V L++ LC+RLRVPNE Sbjct: 239 VIDHAAKQGYSLAVRFAALTHDLGKATTPADVLPRHIGHEGRSVDLLKPLCERLRVPNEC 298 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 RDLA +VA H +H + +V+L + DA RKP R + SEAD RGR G E+ Sbjct: 299 RDLALVVAREHGNLHRVMEMGAAALVRLLERADALRKPARFAEALQASEADARGRLGLET 358 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEAGFKGV--EIREELTRRRIAAVAS 402 YPQ LR+A A++V A + G G +I++ + R R+ AVA Sbjct: 359 KPYPQAERLRQALVAARAVDAGA-IAQGLAGEPAKIKDAVHRARVRAVAQ 407 >UniRef50_A6FG51 Putative tRNA nucleotidyltransferase n=1 Tax=Moritella sp. PE36 RepID=A6FG51_9GAMM Length = 386 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 216/406 (53%), Positives = 269/406 (66%), Gaps = 20/406 (4%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IYLVGGAVRD LL LPVKD+D+VVVG+TP EML GYQQVG+DFPVFLHP + +EYAL Sbjct: 1 MQIYLVGGAVRDKLLSLPVKDKDFVVVGATPAEMLAQGYQQVGKDFPVFLHPNSKQEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSGSGYTGFTCYAAPDVTLE DL RRDLTINA+ +D++G +IDP N DL NRL Sbjct: 61 ARTERKSGSGYTGFTCYAAPDVTLEQDLVRRDLTINAMVEDEHGHVIDPLNARLDLDNRL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH+S +F EDPLRVLRVARFAAR+ LGF IA ETL LM+EMT AG+L LTPERVW+E Sbjct: 121 LRHISESFSEDPLRVLRVARFAARFHQLGFTIAKETLTLMQEMTQAGDLAELTPERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E L+ NP+VFFQVLR+ GAL V+ PE+DALF + + G L L +A Sbjct: 181 VEKTLSADNPEVFFQVLREIGALAVILPELDALFNLAVKNSENDSTSIGQQALTQLKQSA 240 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 LS + VRFA L L H ++ L +R +VPNE RDLA Sbjct: 241 SLSTDLAVRFAALMQQLD--------------HHQIS---IKALAKRCKVPNEHRDLALQ 283 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 V+ + IH L+P I++LFD+ DAWRKP R +Q+ LT + DY Sbjct: 284 VSAQQENIHNARSLDPADIIRLFDNTDAWRKPARFQQILLTC---ASSQVSKLVDDYQPT 340 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 ++L A + + ++ AGF+G EI+++LT +RIAA+ + Q Sbjct: 341 QYLTTMLNAACDIAVQPIIAAGFRGAEIKQQLTTQRIAALTLLRSQ 386 >UniRef50_Q3IK69 tRNA nucleotidyl transferase n=2 Tax=Alteromonadales RepID=Q3IK69_PSEHT Length = 416 Score = 386 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 190/411 (46%), Positives = 255/411 (62%), Gaps = 12/411 (2%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 ++YLVGGAVRD LL D D+VV+G TPQ M G+ +G DFPV+LHP+T EEYAL Sbjct: 7 QVYLVGGAVRDLLLKRASNDNDYVVIGETPQTMEALGFVPIGSDFPVYLHPKTKEEYALG 66 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 RTERKSG GYTGF A+PDVTLE+DL RRDLTIN++A D N IIDP+NG DL++++L Sbjct: 67 RTERKSGKGYTGFVVDASPDVTLEEDLARRDLTINSMALDANDNIIDPFNGQQDLKDKIL 126 Query: 122 RHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKET 181 RH + AF EDP+RVLR+ARF AR+ +RI T ALM+++ GEL HL PERVW ET Sbjct: 127 RHTTDAFVEDPVRVLRIARFLARFGS-EWRIHPSTYALMQQLKQQGELNHLVPERVWLET 185 Query: 182 ESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAM 241 E AL ++P+++FQ L+ G +FPE++ + VP P + HPE D +HT++ L AA Sbjct: 186 EKALGEKHPELYFQALQGLG----IFPELEKMVNVPQPKQHHPEGDVFVHTMLVLRRAAD 241 Query: 242 LSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLV 301 L+ + RFA L HD GK ++ + GH GV +VEQ C+RL++PN RD+ L Sbjct: 242 LNFDLATRFAALTHDFGKAISFKK-RGNLRGHERDGVAVVEQFCERLKIPNCFRDIGVLT 300 Query: 302 AEFHDLIHTFPMLNPKTIVKLF-DSIDAWRKPQRVEQLALTSEADVRGRT-GFESADYPQ 359 ++ H L HT L P+T+ KL +++A PQR + D +GR YPQ Sbjct: 301 SDNHTLCHTLEQLRPETVHKLIVTNLNALVHPQRFIAFTQACQCDAQGRGETLVDKPYPQ 360 Query: 360 GRWLREAWEVAQSVPTKAVVEA----GFKGVEIREELTRRRIAAVASWKEQ 406 LR + K VV+A G KG EI EE+ + I V ++ + Sbjct: 361 AAKLRAIHAELLKLDKKQVVQAALNSGKKGPEIGEEVKQAEINCVKAFLTR 411 >UniRef50_Q8D2W4 CCA-adding enzyme n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=CCA_WIGBR Length = 403 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 172/400 (43%), Positives = 267/400 (66%), Gaps = 5/400 (1%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD LL +P+K++DWVVV STP+EM+ GY+ VG+ FPVFLHP++HEE+AL Sbjct: 1 MKKYLVGGAVRDGLLNMPIKEKDWVVVESTPEEMIKLGYKPVGKSFPVFLHPKSHEEHAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK+G GY GF Y + +TLE+DLKRRDLTINA+A+D NG +IDPY G+ DL + Sbjct: 61 ARTERKNGYGYKGFKLYTSSKITLEEDLKRRDLTINAIAKDKNGNLIDPYGGIKDLYEKK 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 L+H+S +F EDPLRVLR ARFAA HL F I +TL +M EM EL + ER+W E Sbjct: 121 LKHISNSFKEDPLRVLRTARFAAYLFHLNFFIDSKTLKIMSEMI--DELFFIPVERIWLE 178 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 T+ AL RNP V+F+VL CGAL+ +FPEI+ LF + + ++ I+ G TL L ++ Sbjct: 179 TKKALLCRNPHVYFKVLLKCGALKKIFPEIENLFHI--KSFYNKNINLGSLTLRALYESS 236 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 ++S ++ +RF+ LCH+ K + + + G ++ ++C+RL++ NEI+ L+++ Sbjct: 237 LISNEIKIRFSMLCHNFDKFNSN-NKKNSFYCNKINGNLILNKICKRLKLSNEIKKLSKI 295 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + HD ++ ++ K ++K + I+AW+ P+ ++ L + S++ + + + Q Sbjct: 296 ALDHHDTLYKIFFISAKMVIKFLNDINAWKNPKIIDDLIIISKSYGISIGYKKKSMHKQE 355 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 ++++ ++ S+ TK +++ GF G+ I++EL +RR + Sbjct: 356 KFIKNLYKKLNSIKTKDIIKDGFIGINIKKELMKRRENII 395 >UniRef50_Q125I3 Metal dependent phosphohydrolase n=2 Tax=Proteobacteria RepID=Q125I3_POLSJ Length = 462 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 216/463 (46%), Positives = 277/463 (59%), Gaps = 54/463 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IY+VGGAVRDAL+GL V+D DWVVVG+TP++++ GYQ VG+DFPVFLHP+T EEYAL Sbjct: 1 MQIYMVGGAVRDALMGLAVQDHDWVVVGATPEDLVAQGYQPVGKDFPVFLHPETREEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA--------------------- 99 ARTERK+ GY GF +A P VTLE DL RRDLTINA+A Sbjct: 61 ARTERKTARGYRGFVVHADPGVTLEQDLARRDLTINAIAAPARSTGAAAGAAARPGAALN 120 Query: 100 --QDDNGE-IIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADET 156 D + + +IDPY G D+++++LRHV+ AF EDP+R+LR+ARFAAR+A F +A ET Sbjct: 121 TDFDADFDALIDPYGGQKDIRDKVLRHVTEAFREDPVRILRLARFAARFA--DFSVAPET 178 Query: 157 LALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGV 216 LALMR+M GE++ L PERVW+E L P F VLRDCGAL L PE+ L+GV Sbjct: 179 LALMRDMVTEGEVDALVPERVWQELARGLMEDKPSRLFDVLRDCGALHRLLPEVARLWGV 238 Query: 217 PAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPP------------ 264 P A+ HPE+DTG+H +M + MAA L + VRFA LCHDLGKG T Sbjct: 239 PQRAEHHPEVDTGVHLMMVMDMAAQLQASLPVRFACLCHDLGKGTTRAPDAGMSTPGEPP 298 Query: 265 ------------ELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFP 312 RH GH +L++ +C+RLRVP + R+LA +VA H IH Sbjct: 299 PPEFWREKMASDPQLGRHIGHEERSARLLKDVCERLRVPVDCRELADVVAREHGNIHGSA 358 Query: 313 MLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQS 372 +V+L + DA+RKP+R ++ L E D RGR G+E + YPQ L EA AQS Sbjct: 359 AFGAAAVVRLLERCDAFRKPRRFAEVLLACECDARGRLGYEHSPYPQRPRLLEALAAAQS 418 Query: 373 VPTKAV----VEAGFKGVEIREELTRRRIAAVASWKEQRCPKP 411 V T V AG G +I E + + R+AAV P Sbjct: 419 VATHQVAADAQAAGQDGRQIGELIHQARVAAVGEIPGFAAGSP 461 >UniRef50_A6VN94 CCA-adding enzyme n=4 Tax=Pasteurellaceae RepID=CCA_ACTSZ Length = 400 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 204/410 (49%), Positives = 263/410 (64%), Gaps = 18/410 (4%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M IYLVGGAVRD LL LPVKDRDW+VVGSTP E+L GY QVG+DFPVF+HP+THEEYAL Sbjct: 1 MNIYLVGGAVRDQLLHLPVKDRDWLVVGSTPDELLSLGYLQVGKDFPVFIHPETHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE+KSGSGYTGF C +PD+TLEDDL RRDLTINA+AQD NG++ DPY+G+ DL NRL Sbjct: 61 ARTEKKSGSGYTGFICDFSPDITLEDDLIRRDLTINAIAQDKNGKLYDPYHGIEDLNNRL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH+SP+F EDPLRVLRVARFAA++ HLGF IA ETL LM++++ GEL+HLT ERVW E Sbjct: 121 LRHISPSFEEDPLRVLRVARFAAKFYHLGFAIAPETLELMKKLSTQGELQHLTAERVWLE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 TE AL T NP+++FQ L AL L PE+ + ++ + + L A Sbjct: 181 TEKALMTENPEIYFQTLLKIDALPALMPELATI-----------SVENFQYAMTALKNAV 229 Query: 241 MLSPQV-----DVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 L + V FAT+ + + P + + + L ++L+VP + Sbjct: 230 SLIKNMDCNKSAVCFATIFLGII-YVNPSHMTQKQQEQDNHQKNITPCLFEKLKVPAYHK 288 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 +LA L ++H IH L TI+ LF+ D WRKPQR +L + A ++ Sbjct: 289 ELAILAGKYHIYIHNAFNLKSHTIIDLFNKWDVWRKPQRFLELLIVCAAHYSAQSK-NQP 347 Query: 356 DYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKE 405 YPQ +L ++ A ++ K +V AGFK EIR ELTR+RI+AV K Sbjct: 348 TYPQKSYLLGLYQKAMTIDVKNIVSAGFKKTEIRNELTRQRISAVEKIKN 397 >UniRef50_B9XMC7 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=2 Tax=Verrucomicrobiales RepID=B9XMC7_9BACT Length = 440 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 104/417 (24%), Positives = 162/417 (38%), Gaps = 30/417 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 Y VGG VRD LG KD D V + P+++ + + GR F V + + E+ Sbjct: 19 FDAYWVGGCVRDYFLGREPKDFD-VATNAVPEQVERIFQRTIPVGRKFGVLIVLEKGFEF 77 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQ 117 +A T R G + D RRD TIN L D N + D G DL+ Sbjct: 78 QIA-TFRAESDYQDGRHPEQVTFGDPKADASRRDFTINGLFYDPVNDVLHDWVGGEVDLK 136 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++LR + F ED LR+LR RFAA+ L F+I +T A M + +A +++ ++ Sbjct: 137 AKVLRTIGEPAERFAEDHLRLLRAVRFAAQ---LNFQIEAKTFAAM--VANAPKIKTISA 191 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ +E + +LR+ G L + PEI A +HPE H + Sbjct: 192 ERIREELMKVFRPPHAARGLDLLRESGLLEQVLPEIAATITCEQTPDYHPEGSVYNHVRL 251 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLT----PPELWPRHHGHGPAGVKLVEQLCQRLRV 290 LS ++ +A L HD+ K +T P +GH G ++ E L QRL+ Sbjct: 252 MLSQLPED-ASPELPWAVLLHDVAKPVTASRDPETGSIHFYGHEKVGAEMAEVLLQRLKF 310 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 P + D +H P + T+ ++ + D G Sbjct: 311 PRKETDEIVAAVLYHMQFKDVPNMRKSTLRRMIMR-------ETFPLELALHRLDCLGSH 363 Query: 351 GFESADYPQGRWLREAWEV----AQSVPTKAVVEAGFK-GVEIREELTRRRIAAVAS 402 RE + + ++ G + G + E LT R + Sbjct: 364 RMLDHYDFMVEQERELEKKPEILPPLLNGNDLMALGMQPGPAMGELLTELRDKQLQE 420 >UniRef50_C6PT81 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PT81_9CLOT Length = 460 Score = 359 bits (922), Expect = 9e-98, Method: Composition-based stats. Identities = 102/421 (24%), Positives = 180/421 (42%), Gaps = 46/421 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTH------ 55 + Y+VGG VRD+L+ KD D + P++ L+ + R + T Sbjct: 25 ESYVVGGCVRDSLINREPKDWDL-TTNALPEQTLEIFKTEGFRVIETGIKHGTVTILMNG 83 Query: 56 --EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGL 113 E R + + +L++DL RRD TIN++A +++ +ID +NG+ Sbjct: 84 NPYEVTTYRVDGEYLDNRHPD--NVTFTTSLKEDLSRRDFTINSMAYNEDKGLIDYFNGI 141 Query: 114 GDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADE-TLALMREMTHAGEL 169 DL+++++R V F ED LR+LR RF++ L F++ E T + +++ + + Sbjct: 142 SDLKSKIIRCVGNADERFNEDALRMLRAVRFSS---ELEFKLDFEGTFSAIKK--NCNLI 196 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 +++ ER+ +E L + P L++ L + PEI G H + D Sbjct: 197 RNISVERIREEFCKILISHKPSNGVLALKETNLLEYILPEIVPCTGFNQHNVHHDK-DIF 255 Query: 230 IHTLMTLSMAAMLSPQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQLCQ 286 HTL L A +++R A L HD+GK + +GH ++ ++ Sbjct: 256 YHTLSVLDNA---PNNINIRLAALLHDIGKPKCFTMDDKNIGHFYGHNKVSAEIARKILV 312 Query: 287 RLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 RL+ N+ D L+ H F + P +I K + + K + +E L AD+ Sbjct: 313 RLKFDNKTIDTVYLLIYEHM--SKFDKIKPYSIKKFMNRV----KIENLESLFELQIADI 366 Query: 347 RGRTGFESADYPQGRWLREAWE-----------VAQSVPTKAVVEAGFK-GVEIREELTR 394 +G E DY + L++ E ++ ++ G K G +I E L Sbjct: 367 KGLA-EEYRDYSKILSLKDKCETIIKEKQPLNMKDLNINGSDLINLGIKQGKQIGEILEA 425 Query: 395 R 395 Sbjct: 426 L 426 >UniRef50_B3DZP1 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DZP1_METI4 Length = 443 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 106/420 (25%), Positives = 178/420 (42%), Gaps = 24/420 (5%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHE 56 + GG VRD LL D D + +TP ++ + ++ +G+ F V Sbjct: 17 FTAFFAGGCVRDILLKKEPHDID-IATSATPDQVQNLFKEKASGLIGKSFGVIRVKSGAH 75 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 + +A T R G A T ++D RRD TIN + D G IID G D Sbjct: 76 FFEVA-TFRTDIGSQGGRWPKAVQFSTPKEDALRRDFTINGIFYDPLTGTIIDYVGGSED 134 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 ++ + +R + F ED LR+LR RFA R LGF I ++T ++ H + + Sbjct: 135 IEKKRIRAIGDPKIRFEEDHLRLLRAIRFAVR---LGFSIEEKTWEAIQSSAHK--ITQI 189 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 +PER+ +E + T +P ++L G LR + PEI L GV P ++HPE D Sbjct: 190 SPERIREELDKIFTGPDPAKGLELLDQSGLLRFILPEISNLHGVEQPKEFHPEGDVFN-- 247 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLR 289 + L ++ + +P +++ A L HD+GK +T +GH G ++ E++ RLR Sbjct: 248 HVLLLLSHLHNPSLELALAALFHDVGKAVTFSRDNTGQIHFYGHETVGAQITEKIMTRLR 307 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 +I H P + T+ KL P +E + + Sbjct: 308 YSKDIIKKVVECVRNHMSFKDVPRMKKSTLKKLILK---PTFPIELELHRIDCLSSHGNL 364 Query: 350 TGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVASWKEQRC 408 + + + + ++ E+ + + ++ G K G ++ E L R A + R Sbjct: 365 SIYNFLNKIKEQYSAESLSPPKLITGFDLLALGLKPGKKVGEILELIREAQLEDKISSRA 424 >UniRef50_Q058D0 CCA-adding enzyme n=2 Tax=Buchnera aphidicola RepID=CCA_BUCCC Length = 414 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 177/411 (43%), Positives = 260/411 (63%), Gaps = 4/411 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGST-PQEMLDAGYQQVGRDFPVFLHPQTHEEYA 59 MKIYLVGGA+RD LL +PV+DRDWVVVG P+EML YQQVG+ FPVF+HP+THEEY+ Sbjct: 1 MKIYLVGGAIRDRLLNIPVRDRDWVVVGIRDPKEMLKKNYQQVGKGFPVFIHPKTHEEYS 60 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 LARTE+K+G G+TGF + +TL++DLKRRDLTINA+AQD +G+IID +NG D+Q + Sbjct: 61 LARTEKKNGVGHTGFLFDFSSRITLKEDLKRRDLTINAIAQDSSGKIIDFFNGKKDIQKK 120 Query: 120 LLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 +LRHVS +F EDPLRVLR+ARFAA +HLGF IA +TL+LM+ + EL +LTPER+WK Sbjct: 121 ILRHVSYSFQEDPLRVLRIARFAALLSHLGFYIAKKTLSLMKLICSRKELLYLTPERIWK 180 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEI-DALFGVPAPAKWHPEIDTGIHTLMTLSM 238 ET+ L+T+NP V+FQVL C AL LFPEI + I+ ++L+ LS Sbjct: 181 ETQKGLSTQNPHVYFQVLYSCNALFFLFPEINYFYKKTYFLNSFIKHINLVQYSLIELSK 240 Query: 239 AAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLA 298 + ++ +++RF+ P + + + L++++ RL++P E ++ Sbjct: 241 ISKVTKDINIRFSYFLQFFYYVYPIPNIGTKDYFFYKKPAFLLKKMLIRLKIPKETSEII 300 Query: 299 RLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYP 358 + FH+ + + + K I+K F+ ID WRKP R+ QL + ++ D+ Sbjct: 301 FFLCGFHNFLQNINIQSSKLIIKFFNIIDVWRKPNRLNQLIYLDFYNFNSLKNKKN-DFF 359 Query: 359 QGRWLREAWEVAQSVPTKAVV-EAGFKGVEIREELTRRRIAAVASWKEQRC 408 G+ L+ + + + + + + E FKG+EI+ +L R RI + KE+ Sbjct: 360 LGKLLKYMFSLIKDISVCSFIKEKKFKGIEIKNDLNRLRIQSFKEMKEKII 410 >UniRef50_B8D8L9 CCA-adding enzyme n=4 Tax=Buchnera aphidicola RepID=CCA_BUCA5 Length = 414 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 192/412 (46%), Positives = 257/412 (62%), Gaps = 4/412 (0%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIYLVGGAVRD+LL LPVKD+DWVVVG T + +L+ +QQVG+DFPVFLHP+THEEYAL Sbjct: 1 MKIYLVGGAVRDSLLNLPVKDKDWVVVGGTEKILLERNFQQVGKDFPVFLHPETHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR ERKSG GYTGF DVTLE+DL RRDLTINA+AQD+ G IDP+ G D++ L Sbjct: 61 ARKERKSGKGYTGFDTDCNSDVTLEEDLIRRDLTINAIAQDEYGNYIDPFQGKKDIECGL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 +RHVS +F EDPLRVLRVARFAA HLGF+IA+ET+ LM + EL +LT R+W E Sbjct: 121 IRHVSESFIEDPLRVLRVARFAATLVHLGFKIAEETMLLMCIIVKKQELSYLTSNRIWNE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA--PAKWHPEIDTGIHTLMTLSM 238 TE AL T NP V+FQVL +C AL FPE+ L+ + + LM L+ Sbjct: 181 TEKALKTLNPHVYFQVLYECNALHFFFPEMYFLYEKKNFLNRSFFKKFCNKNIILMGLAE 240 Query: 239 AAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLA 298 ++L+ +DVRF+ LC L ++ +C+R ++P+ IRD+A Sbjct: 241 ISLLNKDIDVRFSYLCQFLSVNQIDRNYSKIFF--DSYAASIIHSVCKRFKIPSYIRDIA 298 Query: 299 RLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYP 358 L F+ ++T + K I+ LF +DAWRKP RV++LA S + E Sbjct: 299 VLNTGFYFFLNTIHYQSSKNIINLFSKVDAWRKPDRVKKLAFLSNFNFLRNFKSEFFCIK 358 Query: 359 QGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPK 410 G +L + + V ++V K +++ GFKG EI++E+TR RI + W+ + Sbjct: 359 SGCFLEKCFSVVKNVSIKLILKKGFKGYEIKQEITRLRIKKLEFWRIKNIKH 410 >UniRef50_Q1IG27 CCA-adding enzyme n=7 Tax=Gammaproteobacteria RepID=CCA_PSEE4 Length = 375 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 199/406 (49%), Positives = 257/406 (63%), Gaps = 31/406 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IY VGGAVRD LLG PV D DW+VVG+T ++M G++ VG DFPVFLHP+T EEYAL Sbjct: 1 MQIYKVGGAVRDRLLGRPVSDVDWLVVGATVEQMQAQGFRPVGADFPVFLHPKTGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GY GFT +A+PDVTLE+DL RRDLTINA+A+D++G++ DPY+G DL R+ Sbjct: 61 ARTERKSGRGYGGFTFHASPDVTLEEDLIRRDLTINAMAEDEHGDLHDPYHGKTDLDQRI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRVLRVARFAARYA +GFR+ADETL LMR+++ +GEL LT ER WKE Sbjct: 121 LRHVSLAFAEDPLRVLRVARFAARYAPMGFRVADETLELMRQISASGELLALTAERSWKE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E AL PQVF +VLR CGAL+ L PE+DAL +H E+ G H L L AA Sbjct: 181 IERALMEDQPQVFIEVLRACGALKELMPEVDAL--------FHGEVSQGSHALDVLQQAA 232 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + VR+A L L G K ++ + QR + P E ++LA L Sbjct: 233 AQQQPLAVRWACLLLAL-------------------GGKQIKTVNQRFKAPRECQELAIL 273 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 V EFH+ H L P+ ++ L D +R+PQR E+ D DYPQ Sbjct: 274 VGEFHEQGHRAMELAPEMLLDLLQKFDVYRRPQRFEEFIEACRMDAL----LGGRDYPQS 329 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 +LR A A++V K ++E+G G + L R++A+ ++K + Sbjct: 330 EYLRGAAATARAVDVKPLMESGLTGQALGGALKAARLSALQAYKAR 375 >UniRef50_B1KWG6 PolyA polymerase family protein n=16 Tax=Clostridium RepID=B1KWG6_CLOBM Length = 450 Score = 351 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 96/419 (22%), Positives = 172/419 (41%), Gaps = 43/419 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT------- 54 + Y+VGGAVRD+LL V D D + + PQE+++ + P L T Sbjct: 27 EAYIVGGAVRDSLLERKVNDWD-ITTSANPQEVMNIFENLGYKIIPTGLKHGTVTILINS 85 Query: 55 -HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGL 113 E R + + L++DLKRRDLTINA+A +D ++D ++GL Sbjct: 86 IGYEVTTFRIDGEYEDNRRPK--EVKFTSNLKEDLKRRDLTINAMAYNDKTRLVDYFHGL 143 Query: 114 GDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 DL N+++R V F ED LR+LR RFA++ L F + + T +RE++ + Sbjct: 144 EDLNNKIIRCVGDSKDRFNEDSLRMLRCIRFASQ---LNFHMEESTKLNIRELSR--NIA 198 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGI 230 +++ ER+ E L + P + + + + + PE+ A G H + D Sbjct: 199 NVSMERIRDELCKILVSSQPVYGIRNIVELNLVDYIIPELKACVGFEQHNIHHDK-DVYG 257 Query: 231 HTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPP---ELWPRHHGHGPAGVKLVEQLCQR 287 H L + + ++++R + L HD+GK +GH + + + +R Sbjct: 258 HILSVV---ENVPNKLELRLSALLHDIGKPKCFSIGDNGQGHFYGHQKISADMTKDILKR 314 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 L+ N+I + H + L +I K + + ++ L AD++ Sbjct: 315 LKFDNKIIYKVDKLVYNHMT--RYNKLRTPSIKKFINKVGI----DNLDDLFELQIADIK 368 Query: 348 GRTGFESADYPQGRWLREAWE----------VAQSVPTKAVVEAGF-KGVEIREELTRR 395 G + + + + +++ G +G EI L + Sbjct: 369 GSAKEYHSFNNVLNLKIKCEKILSEKQPLTIKDLDINGYDLMKLGINQGKEIGIMLNKL 427 >UniRef50_A5Z8C9 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum ATCC 27560 RepID=A5Z8C9_9FIRM Length = 457 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 103/416 (24%), Positives = 180/416 (43%), Gaps = 38/416 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYA 59 + + VGG VRD +L +D D + + P+++ + + + G H Y Sbjct: 31 EAFAVGGCVRDTILDREPQDWD-ITTSALPEQVKELFNRTLDTGIQHGTVTVMIKHVGYE 89 Query: 60 LARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + T R G L +DLKRRD TINA+A ++ ++D ++G+ D+ N Sbjct: 90 V-TTYRIDGEYNDSRHPESVEFTSNLIEDLKRRDFTINAMAYNEREGLVDAFDGINDINN 148 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +++R V FGED LR+LR RF+A+ LGF I ++T+ ++++ A LE+++ E Sbjct: 149 KIIRCVGEPEERFGEDALRILRAVRFSAQ---LGFDIDEKTMEAIKKL--APTLENISAE 203 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E E + ++NP + G +V+ PE DA+ +H + G HT+ Sbjct: 204 RIKTELEKLIISKNPCK-LITAYNAGITKVILPEFDAMMECEQNTPYH-MYNVGEHTIKV 261 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGL---TPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 + +S +R+ L HD+ K L T GH G +L Q+ +RL++ N Sbjct: 262 M---ENVSADKLMRWTALFHDVAKPLVKTTDANGRNHFKGHALEGSRLAPQIMRRLKMDN 318 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 + A + E HD NP+ I + I AD G++ + Sbjct: 319 KTIKTASRLIECHDDRPASKGFNPEAIRRSVHKIG----KDIYHNYLELVYADFMGKSKY 374 Query: 353 -ESADYPQGRWLREAWE-----------VAQSVPTKAVVEAGFK-GVEIREELTRR 395 + Y ++ + +E ++ K ++ G G +I L Sbjct: 375 GKDEGYDAYVYVCKQYEYIMENNICTSTKELAITGKDLIALGCPLGEKIGRALDEL 430 >UniRef50_A8MJB7 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Alkaliphilus oremlandii OhILAs RepID=A8MJB7_ALKOO Length = 450 Score = 348 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 103/415 (24%), Positives = 171/415 (41%), Gaps = 38/415 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA--GYQQV--GRDFPVFLHPQTHEE 57 + Y+VGG VRD++L +D D TP++M++ G++ + G H Sbjct: 28 EGYIVGGCVRDSILNKSPQDWDIC-TNCTPEKMMELLSGFKVIPTGLKHGTVTVVIDHVG 86 Query: 58 YALARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 Y + T R G G +L +DLKRRD TINA+A +ID + G+ DL Sbjct: 87 YEV-TTYRVDGDYRDGRHPEKVQFTASLREDLKRRDFTINAMAYHHKDGLIDYHGGMEDL 145 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 NR ++ V F ED LR+LR RF+A+ L + + + T +R ++H + ++ Sbjct: 146 WNRKIKTVGNPLERFSEDYLRMLRAVRFSAQ---LDYTLEERTFQGIRALSH--NIGKIS 200 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ +E L T P +L D L+ + PE++ G + H + D H L Sbjct: 201 TERIREELNKILMTEVPSRGLVLLHDTDLLKYILPELEVCVGFNQHSPHHDK-DVFNHIL 259 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRV 290 + + +R A L HD+GK T + H A K +++ +RL+ Sbjct: 260 SVVDQTE---KDLILRLAALLHDIGKPETFSLDESGIGHFYRHHVASWKTAQKIMRRLKY 316 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 N D + + H + L+ K I +L ++ P + +L AD+ G + Sbjct: 317 DNRTIDQVLALVKEHMT--RYEKLSDKAIKRLISRVN----PSNMHRLFKLQIADIGGSS 370 Query: 351 GFESADYPQG--RWLREAWEVAQS-------VPTKAVVEAGF-KGVEIREELTRR 395 R Q + ++E G +G +I L Sbjct: 371 KRNDISDVLDLKRRAERILHEKQPLSIKDLEISGHHLMELGVPEGKKIGRILNEL 425 >UniRef50_C9XLQ0 Putative poly(A) polymerase n=6 Tax=Clostridium difficile RepID=C9XLQ0_CLODC Length = 470 Score = 347 bits (890), Expect = 6e-94, Method: Composition-based stats. Identities = 97/415 (23%), Positives = 176/415 (42%), Gaps = 39/415 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 + Y+VGG VRD LL D D + + P+ +++ + + E Sbjct: 48 EAYVVGGCVRDCLLERVPNDWD-ITTSARPEVVVELFEKTIPTGIQHGTVTVMIEHEPFE 106 Query: 62 RTERK-SGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 T + G+ G + DL RRD TIN++A + ++DP+NG D+QN+ Sbjct: 107 VTTYRIDGNYSDGRHPDSIEFTNNIVKDLSRRDFTINSIAYNSKTGLVDPFNGYEDIQNK 166 Query: 120 LLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 +R V F ED LR+LR RF+A+ L F+IA+ T + + A +++++ ER Sbjct: 167 YIRCVGNPVDRFEEDALRMLRAVRFSAQ---LNFKIAEGTKQSIHK--KADLIKNVSIER 221 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + E L + + + +L+ G L+ + PEI L V +H D HTL++ Sbjct: 222 IQTEFNKILVSDSSK--LNLLKSTGLLKFIIPEICELEDVTQHNPYHI-YDVQKHTLIS- 277 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGL---TPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 ++ ++ ++ L HDLGK + T + H VK+ +++ +RL+ N Sbjct: 278 --TEVIEDELYLKLTMLFHDLGKKVTKTTDKNGVDHFYTHSRESVKIAKKILRRLKYDNY 335 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF- 352 + ++ ++HD K I KL + ++ + E L + AD + Sbjct: 336 TINKVLILIQYHDY---RIEPKRKIIKKLLNKLE---DVELFEDLIKVNWADTLAKNPKY 389 Query: 353 -ESADYPQGRWLREAWEVA----------QSVPTKAVVEAGFK-GVEIREELTRR 395 + +E + ++ K ++ G K G +I L + Sbjct: 390 AKQKILNLIECEKEFKHIINQKECFNLKDLAINGKDLISIGIKPGKDIGHILNKM 444 >UniRef50_B4RVV4 CCA-adding enzyme n=2 Tax=Alteromonas macleodii RepID=CCA_ALTMD Length = 397 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 181/413 (43%), Positives = 241/413 (58%), Gaps = 24/413 (5%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M++YLVGGAVRDALL V +RD+VVVG+TPQEML G+ QVG+DFPVFLHP+T EEYAL Sbjct: 1 MQVYLVGGAVRDALLNRKVIERDYVVVGATPQEMLSQGFTQVGKDFPVFLHPKTQEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GYTGF C A+ VTLE+DL RRDLT+NA+AQD+ G +IDPY G DL+N L Sbjct: 61 ARTERKSGKGYTGFVCDASSSVTLEEDLLRRDLTVNAIAQDNLGNLIDPYGGKKDLENHL 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRV RVARFA RYA+LGF IA+ET+ALM+ M +GEL L+ ERVW+E Sbjct: 121 LRHVSEAFSEDPLRVFRVARFATRYAYLGFTIANETMALMQSMAESGELSTLSAERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 T+ +L + P VFF VL L F E++ +D I TL T Sbjct: 181 TKRSLLEKTPHVFFTVLNQAHGLNDWFAELE------------SNLDAAIATLKTAVALE 228 Query: 241 MLSPQVDVRFATLCHDLGKGLTPP-------ELWPRHHG-HGPAGVKLVEQLCQRLRVPN 292 + + + L + + P L R + ++LC RL+V N Sbjct: 229 NAAKENFDKSGQLENKPLETKIPESSSSGTTTLIIRFTALLAHLNEEEAKRLCNRLKVQN 288 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 ++ ++ L +F D + +P ++ LF+ DAWR+ +R L L + A Sbjct: 289 QLSEIVILACKFKDFLLN-TQNSPADLLALFNGCDAWRRSERF-TLLLKAFAPYAHYKDL 346 Query: 353 ESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKE 405 + Q + A A V + ++ G KG I+E L + ++ A+AS E Sbjct: 347 D--WQRQQEHIENALSAANQVNVQDIIATGVKGPAIKEALNQAKLDAIASIGE 397 >UniRef50_B2UM12 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=2 Tax=Bacteria RepID=B2UM12_AKKM8 Length = 464 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 106/428 (24%), Positives = 172/428 (40%), Gaps = 36/428 (8%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEYAL 60 +Y VGG VRD LLG VKD D + + P E+L +VG F V L + + + Sbjct: 28 VYFVGGCVRDRLLGYSVKDID-IATSARPDEVLRLFPDAWEVGAAFGVVLVRREGFSFEV 86 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDPYNGLGDL 116 A T R+ GS G E+D +RRD T+N L +D G ++D G+ D+ Sbjct: 87 A-TFRRDGSYRDGRRPEDVCFTDAEEDARRRDFTMNGLFEDPFSSPPGRVVDYVGGVEDI 145 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + R+LR + F ED LR++R RFA ++ ET + + +A L ++ Sbjct: 146 RARVLRCIGEPDRRFEEDSLRLMRAVRFAVTREV---QVEKETCSSI--FRNAPLLARIS 200 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 PER+ +E + L + + ++L + G ++ + PEI + G P +WHPE D HTL Sbjct: 201 PERIREELDRILLSPGRKRGVEMLVETGLMKHVIPEIYDMIGCTQPPQWHPEGDVYTHTL 260 Query: 234 MTLSMAAMLSPQVDVRFA--TLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQLCQRL 288 M L V ++ A L HD+GK R GH G + + +RL Sbjct: 261 MMLDALGRDGSPVSLKLALGVLLHDIGKPPCRQVDETGRIRFSGHDKEGSSMARVILRRL 320 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 + N + D + E H + T+ ++ D Sbjct: 321 KYSNAVVDAVCSMVERHMRFINVRQMRKSTLRMFMNA-------PHFRDELELHRLDCLS 373 Query: 349 RTGFESADYPQGRWLREAWE----VAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVAS- 402 G ++ V + +V G G + + L+R + + Sbjct: 374 SNGLMDNWQFVRDFMDSYRNAPLVPPPLVTGRDLVNLGLSPGPDFGKWLSRLQELQLEGT 433 Query: 403 --WKEQRC 408 +E+ Sbjct: 434 LRTREEAL 441 >UniRef50_Q73NW9 PolyA polymerase family protein n=1 Tax=Treponema denticola RepID=Q73NW9_TREDE Length = 448 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 103/424 (24%), Positives = 170/424 (40%), Gaps = 39/424 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG----RDFPVFLHPQTHE 56 YLVGGAVRD LG P KD D + + P+E+ + + L+ Sbjct: 21 FSAYLVGGAVRDWFLGKPCKDYD-IATDAEPKEVQALFRKTIPTGIAHGTVTILYKDEKI 79 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 E R E G ++E+DL RRD T+NA+A +G I+DP++G+ Sbjct: 80 ECTTFRCEADYSDGRRP--QSVNYVRSIEEDLSRRDFTMNAIAVSLKDGSIVDPFDGVKS 137 Query: 116 LQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 ++++ ++ V FGED LR +R RFA++ LGF+I +ETL + + + Sbjct: 138 IKSKTIKTVGSPLDRFGEDGLRPIRAIRFASQ---LGFKIEEETLKAIPLSIEVC--KKV 192 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER E L + +P + ++L D G L+V PE+ GV D H+ Sbjct: 193 SIERFRDEFVKMLLSEHPIISLKLLEDTGLLKVFLPELSDCRGVEQKGMH--SFDVLDHS 250 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPE---LWPRHHGHGPAGVKLVEQLCQRLR 289 ++ A VR A L HD+GK T + + H KL +++ QRL+ Sbjct: 251 FLSCDAAPQ--DNPIVRLAALFHDIGKVSTREKNEYGDYTFYKHEAVSEKLTKKIMQRLK 308 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 PN+ + + H H + + + + L AD G Sbjct: 309 FPNKEIEEVSHLVGLHM-FHYTEDWTDAAVRRFIVRAGV----ENIPNLFDLRRADGFGM 363 Query: 350 TGFESADYPQGRWLREAWE----------VAQSVPTKAVVEAGFK-GVEIREELTRRRIA 398 TG + + + +V + ++E G G ++ L + A Sbjct: 364 TGQAPDLSNLAAFKKRLEKVIAEDSALSLKDLAVGGRELMEIGIPAGPKLGIILQKLFEA 423 Query: 399 AVAS 402 + Sbjct: 424 VLED 427 >UniRef50_Q1Q5Z9 Similar to poly(A) polymerase n=2 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q5Z9_9BACT Length = 437 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 101/427 (23%), Positives = 175/427 (40%), Gaps = 31/427 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLHPQTHEEY 58 GG VRD ++ D D + + P ++++ + VG + V + + + Sbjct: 19 FDALFAGGCVRDMIMRRESADYD-IATNALPHDVMNLFKKTFSVGTQYGVVVVVKDGHNF 77 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQ 117 +A T R S G T E+D++RRD TIN L D E++D G D+ Sbjct: 78 EVA-TFRTEKSYSDGRHPDYVSFSTAEEDVRRRDFTINGLLYDPVKKEMLDYVGGRDDIA 136 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++R + ED LR++R RFA R+ F I +ET + + A ++ ++ Sbjct: 137 AGIIRTIGDPVERLTEDKLRMIRAVRFACRF---NFHIHEETRQAIINL--APQIHVVSA 191 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ +E + +T NP + Q+L + LR + PE+ + GV P +HPE D HTL+ Sbjct: 192 ERIREELQKIITGPNPHLGIQLLDELCLLREILPEVSEMKGVRQPENFHPEGDVFTHTLL 251 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPEL-WPRHHGHGPAGVKLVEQLCQRLRVPNE 293 LS +P + L HD+GK T EL R + H G + ++C RL+ N Sbjct: 252 CLSKME--NPSWTLAMGVLLHDMGKPRTFQELDRIRFNLHEKVGADITAKICNRLKTSNA 309 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 ++ + H + + +LF + ++L D +G Sbjct: 310 DKERIIWLVLKHLCFKDAKKMRLNKLKRLFAH-------EAYKELEELCRIDALASSGDL 362 Query: 354 SADYPQGRWLREA----WEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVA---SWKE 405 S Y + + + ++ G G + LT+ + + KE Sbjct: 363 SDYYFCREMFEKLSKEEVKPKPLITGHDLIAIGLTPGPAFKHILTKIEDEQLDGNITTKE 422 Query: 406 QRCPKPE 412 + K + Sbjct: 423 EALKKAQ 429 >UniRef50_C1F9R3 tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9R3_ACIC5 Length = 462 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 124/421 (29%), Positives = 185/421 (43%), Gaps = 31/421 (7%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLHPQTHEEYA 59 + Y GG VRD LLG P KD D V + P +L + VG F V L + Sbjct: 33 EAYFAGGCVRDMLLGHPPKDYD-VTTRARPDVVLALFPRTYAVGAHFGVVLVADEIDGQP 91 Query: 60 LAR---TERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDD---------NGEI 106 + T R G+ G A EDD+ RRD TIN + D + + Sbjct: 92 ITTEVATFRSDGAYLDGRRPSEVAFADRPEDDVLRRDFTINGMLLDPEKWQQTGSLDDAV 151 Query: 107 IDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREM 163 +D +G DL ++R + F ED LR+LR RFAAR+ G+ + ET A +R++ Sbjct: 152 LDFVDGRADLSAGIVRAIGHAERRFTEDKLRMLRAVRFAARF---GYELEPETFAALRQL 208 Query: 164 THAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH 223 A + ++ ERV E LT + + F++L G LR + PEID L GV P ++H Sbjct: 209 --APGIAQVSRERVRDELTRMLTEGHARHAFELLDASGLLREVLPEIDRLHGVEQPPQYH 266 Query: 224 PEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPEL--WPRHHGHGPAGVKLV 281 PE D +HTL+ L A P + + L HD+GK T R GH GVK+ Sbjct: 267 PEGDVWVHTLLLLEKLAPGCP-ATLAWGALLHDVGKPATFERAPDRIRFSGHVEVGVKIA 325 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALT 341 ++C+RLR N+ + + E H + P T+ + F + +E + Sbjct: 326 AEICRRLRFSNDETEQILALVENHMRFGDIQRMKPSTLKRFFRLPGF---DEHLELHRID 382 Query: 342 SEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAV 400 + T +E A EA V + ++EAG++ G + R+ L A + Sbjct: 383 CLSSHGDLTLYEFAQQQYHALPPEAVRPPLLVTGRDLIEAGYQPGPQFRQWLALAEDAQL 442 Query: 401 A 401 Sbjct: 443 E 443 >UniRef50_A9KEZ9 CCA-adding enzyme n=6 Tax=Coxiella burnetii RepID=CCA_COXBN Length = 376 Score = 337 bits (864), Expect = 5e-91, Method: Composition-based stats. Identities = 176/403 (43%), Positives = 235/403 (58%), Gaps = 44/403 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +K+YLVGGAVRD LLGLPVK++DWVVVG+TP+EM G++ VG++FPVFLHP+THEEYAL Sbjct: 16 LKVYLVGGAVRDQLLGLPVKEKDWVVVGATPEEMTARGFKPVGKEFPVFLHPETHEEYAL 75 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK GY GFT YAAPDV+LE+DLKRRDLTINA+A+ G++IDPY G DL+N++ Sbjct: 76 ARTERKVAKGYKGFTFYAAPDVSLEEDLKRRDLTINAIAETPEGQLIDPYGGQEDLKNKV 135 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDP+RVLR+AR A ++ F I +TL LM++M AGE++ L PERVW+E Sbjct: 136 LRHVSVAFQEDPVRVLRLARLATKFP--DFSIHPDTLELMKKMVCAGEIDALVPERVWQE 193 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 AL P FF VL CGAL +LFPEI + G + L Sbjct: 194 LNRALGNEKPTRFFTVLNQCGALAILFPEIK-MEGKG---------------MAALQSVT 237 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +P +RFATL DL +++++L R RVPNE DLA L Sbjct: 238 DKTPSPLIRFATLQSDL-------------------PPEIIQKLAGRYRVPNEYADLAIL 278 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 VA F ++ +++ DA R+ +R +Q T S Q Sbjct: 279 VARFGSDYVNLNRMDETSLLNFLLKTDALRRQERFDQFIFTC-------DLISSTTSSQP 331 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASW 403 + ++E + +SV K + E KG + L + R+ A+ + Sbjct: 332 KKIKEIIKAVKSVDIKPLQEKQLKGEAFAKALEKLRLEAIRTL 374 >UniRef50_C6DY30 Poly A polymerase family protein n=2 Tax=Clostridium botulinum D str. 1873 RepID=C6DY30_CLOBO Length = 470 Score = 337 bits (864), Expect = 5e-91, Method: Composition-based stats. Identities = 96/426 (22%), Positives = 172/426 (40%), Gaps = 48/426 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT------- 54 + Y+VGG VRD+LL D D + + P E+++ P L T Sbjct: 52 EAYIVGGCVRDSLLEKKPNDWD-ITTSALPNEVINIFKNLGYTILPTGLKHGTVTIVINN 110 Query: 55 -HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGL 113 H E R + + L++DL RRD TIN++A + +ID +N Sbjct: 111 EHYEVTTYRIDGEYEDNRHP--NEVEFTRNLKEDLNRRDFTINSMAYNHKDGLIDYFNSK 168 Query: 114 GDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 DL +R+++ V F ED LR+LR RFAA+ L F+I ++TL R++ G L+ Sbjct: 169 NDLDSRIIKCVGDPVKRFSEDALRILRAYRFAAQ---LDFKIENKTLNATRQL--KGNLK 223 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGI 230 +++ ER+ E L T F L G L+++FPE+ V + +H + + Sbjct: 224 NISIERIRDEINKILLTD--STIFFQLYKFGILKIIFPELHQCHNVEQNSPYHMK-NLFN 280 Query: 231 HTLMTLSMAAMLSPQVDVRFATLCHDL---GKGLTPPELWPRHHGHGPAGVKLVEQLCQR 287 H + ++ + P++ ++ L H + T + H H +++ +R Sbjct: 281 HIINSVL---NIEPKLHLKLTMLLHAICTVQCKTTDEKGIDYFHNHEELSSYKAKKILKR 337 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 ++ N + ++ ++H+ + K+I KL I L EAD++ Sbjct: 338 MKYDNNTINKVSILIKYHNRKID----SNKSIRKLLSLIGE----DNFRDLLKVKEADIK 389 Query: 348 GRTG-----FESADYPQGRWLREAWE-------VAQSVPTKAVVEAGFKGVEIREELTRR 395 + + L E V + ++E G+ G +I + L Sbjct: 390 AQNLKYYHERHNKLIEIEARLNEILSKNQCFLLKDLKVNGRDLLELGYSGKDIGDILNNL 449 Query: 396 RIAAVA 401 + Sbjct: 450 LEKVLE 455 >UniRef50_C8PQT7 tRNA adenylyltransferase n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQT7_9SPIO Length = 456 Score = 336 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 100/417 (23%), Positives = 161/417 (38%), Gaps = 37/417 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG----RDFPVFLHPQTHE 56 YLVGGAVRD L D D + + PQE++ + + ++ H Sbjct: 23 FSAYLVGGAVRDFFLKKAASDWD-IATDAQPQEVMRLFRRTIPTGIEHGTVTIIYKSKHI 81 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 E RTE G + T+E+DL RRD T+NA+A +G I DP+NG D Sbjct: 82 ECTTFRTEADYTDGRHP--AAVSYTATIEEDLSRRDFTMNAIAVSLPDGIIADPFNGCAD 139 Query: 116 LQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 ++ +R V F ED LR +R RFAA+ LGF I +TL + + H + + Sbjct: 140 IRAGRIRTVGNPLDRFLEDGLRPVRAVRFAAQ---LGFAIDGKTLEAIPQALHIT--QKI 194 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER +E L P +++ G L + PE+ GV + H D H+ Sbjct: 195 SIERFREEFTKMLACPAPLTGLRLMESTGLLNLFIPELAECRGVEQGSFHH--FDVLDHS 252 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPP---ELWPRHHGHGPAGVKLVEQLCQRLR 289 + + + +R A L HD+GK T + + H K+ + +RL+ Sbjct: 253 FLVCNACPAGMEHIHIRLAGLFHDIGKPATRKQAADGSYTFYRHEAVSEKITRSIMRRLK 312 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 N + + H H P + + + + ++ L +ADV G Sbjct: 313 YSNAEIEKTAHLVAQHM-FHYDPSWTDAAVRRFIVRVG----KENIDDLFALRKADVFGL 367 Query: 350 TGFESADYPQGRWLREAWE----------VAQSVPTKAVVEAGFK-GVEIREELTRR 395 TG + + + +V K ++ G G + L Sbjct: 368 TGSYTEPNFLVEFTARIDKILKEDGAYSLKDLAVNGKDLMALGIPAGKCLGLVLHDL 424 >UniRef50_B8I4X8 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=25 Tax=Clostridiales RepID=B8I4X8_CLOCE Length = 448 Score = 336 bits (862), Expect = 9e-91, Method: Composition-based stats. Identities = 98/412 (23%), Positives = 171/412 (41%), Gaps = 40/412 (9%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 YLVGG VRD++L D D + + P ++ + E L Sbjct: 27 AYLVGGCVRDSILCKAPYDWD-ITTNALPIDIKSIFDRTYDTGIKHGTVTVLIGEMCLEV 85 Query: 63 TERKSGSGYTGFTCY--AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 T + Y F +L +DL RRD TINA+A ++D + GL DL+ R+ Sbjct: 86 TTYRIDGDYKDFRRPDKVEFTSSLREDLARRDFTINAMAYHPEQGLVDFFGGLQDLKKRI 145 Query: 121 LRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 ++ V F ED LR++R RF+A+ LGF I + T ++ +++ + +++ ER+ Sbjct: 146 IKAVGDPEQRFREDALRMMRAIRFSAQ---LGFEIEEATFEAIK--SNSALIANISSERI 200 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 E L + NP+ F L G L + PE + + +H + HT+ + Sbjct: 201 RDELNKTLVSENPEH-FNYLHQTGILPYILPEFERCYKTEQINPYHV-YNVADHTMYAVK 258 Query: 238 MAAMLSPQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + +R+ L HD+GK T + +GH ++ E++ RLR E Sbjct: 259 ---SIENDHILRWTVLLHDVGKPPRKTTDSKGIDHFYGHQAVSSQIAEKVLNRLRFDKES 315 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 L+ ++HD+ PK+I K + I + L +AD + Sbjct: 316 IKKIVLLVKYHDM---DIEDTPKSIRKAVNKIG----DELFPLLLKVQKADKMAQNPKFL 368 Query: 355 ADYP-QGRWLREAW-----------EVAQSVPTKAVVE-AGFK-GVEIREEL 392 A+ + + + + + +V +++ G K G++IRE L Sbjct: 369 AERIVKWNRIEKIYSDIKSEQQCLSKKDMAVNGDDLIQLLGMKPGIQIREML 420 >UniRef50_Q1IUE8 Metal dependent phosphohydrolase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IUE8_ACIBL Length = 454 Score = 336 bits (861), Expect = 1e-90, Method: Composition-based stats. Identities = 112/432 (25%), Positives = 178/432 (41%), Gaps = 36/432 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLHPQTHE--- 56 + YLVGG VRD LLG D D V + P +++ + VG F V L P E Sbjct: 20 QAYLVGGCVRDLLLGRDPADYD-VATDAIPDQVMKIFPKTWAVGAQFGVVLVPVPDEPEC 78 Query: 57 ------------EYALARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDD- 102 T R G G +D++RRD TIN + D Sbjct: 79 DPEATHPQSHHHGCIEVATFRSDGVYSDGRHPDEVRFSQDPREDVQRRDFTINGMLLDPL 138 Query: 103 -NGEIIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLA 158 + E++D G DL +++R + F ED LR+LR RFAAR+ + IA ET+A Sbjct: 139 NHDEVLDFVGGRADLAAKIIRTIGDPRQRFEEDKLRMLRAVRFAARFE---YEIAPETMA 195 Query: 159 LMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA 218 +++++ + ++ ++ ERV E LT + + F++L + G L + PEI + GV Sbjct: 196 VIQQL--SPQISVVSHERVRDELTKMLTEGHARRAFELLDESGLLIQVLPEIAKMKGVQQ 253 Query: 219 PAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPEL--WPRHHGHGPA 276 P ++HPE D IHTLM L + + L HD+GK T R GH Sbjct: 254 PPQFHPEGDVWIHTLMLLEQLPPNC-SPTLAWGALLHDVGKPPTFRRAPDRIRFDGHVDV 312 Query: 277 GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVE 336 GV++ E L +++R NE D + E H + T+ + + + +E Sbjct: 313 GVRMTEVLGKQMRFSNEQLDQVSALVENHMKFAEVTHMRESTLKRFMR---LPKFDEHME 369 Query: 337 QLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRR 395 + A R ++ + V ++ G + G +E L+ Sbjct: 370 LHKMDCLASHRNLGSYDFLKQKMEETQPKEIRPEPLVTGADLIALGHRPGPLFKEILSSV 429 Query: 396 RIAAVASWKEQR 407 + + R Sbjct: 430 EDGQLEGRLQSR 441 >UniRef50_Q2BK09 TRNA nucleotidyl transferase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BK09_9GAMM Length = 370 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 177/397 (44%), Positives = 241/397 (60%), Gaps = 41/397 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIYLVGGAVRD LL PV D+DWVVVGS+P+EM+++GYQ VG+DFPVF+HP+T EEYAL Sbjct: 1 MKIYLVGGAVRDKLLNYPVYDKDWVVVGSSPEEMIESGYQPVGQDFPVFIHPETGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE KSG GYTGF +A +VTLE+DL RRDLTINA+A D+ G ++DPY+G DL +R+ Sbjct: 61 ARTEMKSGKGYTGFNYFADKNVTLEEDLVRRDLTINAMAMDEQGSLVDPYDGQKDLADRI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLRVLRVARFA+RY HLGFR+A ETL LM+E+ ELEHLT ERVWKE Sbjct: 121 LRHVSPAFSEDPLRVLRVARFASRYNHLGFRVAQETLNLMQELALTDELEHLTTERVWKE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E ALT ++P VF +L A + + PE+++ D Sbjct: 181 FERALTEKSPWVFLSILHQTKASKKVLPELESWLDT----------DNWQSI---FRNCC 227 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +S + D+RFA L A +K V C RLR ++L Sbjct: 228 EVSKEADIRFACLS-------------------TLADLKNVPAFCDRLRTQKATKELTMQ 268 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 A+ L+ TF +T +++ +D +R+PQR+E++ +A R + Sbjct: 269 CADHSALLSTFDSQPAETKLEILQGLDLFRRPQRLEKILSCVKALYREHS---------T 319 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRI 397 + L+ + + K +++ G+KG + +ELT+R++ Sbjct: 320 QSLQPILDEISKIDPKQLIKEGYKGAALGKELTQRKL 356 >UniRef50_Q1QC26 Polynucleotide adenylyltransferase region n=2 Tax=Psychrobacter RepID=Q1QC26_PSYCK Length = 390 Score = 333 bits (855), Expect = 6e-90, Method: Composition-based stats. Identities = 164/411 (39%), Positives = 229/411 (55%), Gaps = 33/411 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M++YLVGGAVRD LLG P+KD+D+VVVG+T EML+AG+QQVG DFPVFLHP EEYAL Sbjct: 1 MQVYLVGGAVRDQLLGRPIKDKDFVVVGATVTEMLEAGFQQVGADFPVFLHPVNREEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD---------DNGEIIDPYN 111 ARTERK G GY GF+ +A+ DV+L+DDL+RRDLTINA+A + +G++ID Y Sbjct: 61 ARTERKQGLGYQGFSVHASIDVSLKDDLQRRDLTINAMAIEVTSLTDDTPISGDVIDYYG 120 Query: 112 GLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 GL D++N+ LRHVS AF EDPLRVLR ARF +RY LGF IAD+TL LMRE+ +GEL H Sbjct: 121 GLQDIENKTLRHVSSAFNEDPLRVLRTARFYSRYYDLGFTIADDTLVLMRELVASGELTH 180 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 L+ ER+W+E+ A+ +PQV++Q L D GAL F + + Sbjct: 181 LSSERIWQESSRAMMQLSPQVYWQQLFDIGALAEYFAPLHQAWNDDQ---------LRET 231 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 +L A + + R+A + L P L+ H VK + + +VP Sbjct: 232 VQTSLYFAGQMHLNLSQRWALVMVSL-----KPSLFQNKHTEAITAVKSINDIGNMAKVP 286 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 A L + D + L+ + L + A ++P+++ QL +TS+ Sbjct: 287 KAQTQFASLFVQQADKLSVITQLSAAEKIDLIQACSAHKEPEKLSQLLVTSQVLQLS--- 343 Query: 352 FESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 Q R + A S+ ++ KG I + L + RI + + Sbjct: 344 ------IQHRQMMLALNSFHSIGMND-IDQSLKGPAIGKALRQCRIEHLQT 387 >UniRef50_A5WEX7 tRNA cytidylyltransferase n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WEX7_PSYWF Length = 413 Score = 333 bits (854), Expect = 8e-90, Method: Composition-based stats. Identities = 156/431 (36%), Positives = 220/431 (51%), Gaps = 47/431 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M++Y+VGGAVRD LL P D+D+VVVG+TP++M++AG+ QVG DFPVFLHP+T EEYAL Sbjct: 1 MQVYIVGGAVRDELLNRPYTDKDFVVVGATPEQMIEAGFIQVGADFPVFLHPKTKEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD---------DNGEIIDPYN 111 ARTERKSG GY GF YA+P+VT+E+DL RRDLTINA+A + GE+IDPY+ Sbjct: 61 ARTERKSGKGYKGFEVYASPEVTIEEDLLRRDLTINAMAIEVKSLWDSTPLTGEVIDPYD 120 Query: 112 GLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARY----AHLGFRIADETLALMREMTHAG 167 G D++N++LRHVS AF EDPLRVLR+ARF R+ A F IA +TLAL+ + + Sbjct: 121 GQSDIKNKMLRHVSEAFSEDPLRVLRIARFYGRFYDPKAEHNFSIAPDTLALIATINDSD 180 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 EL LT ERVW+ET AL P + L+ GAL +FP I G Sbjct: 181 ELACLTAERVWQETSRALMQDCPYAYLDCLQYMGALPHIFPSIANALGDDKIKAL----- 235 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLV------ 281 L +A L+ + R+A + L + + H H P + Sbjct: 236 ----VFQALQLAGQLNLSLQQRWAIIMLSLAQEVIDVLNPRHHSNHHPHQIDEALFSAWA 291 Query: 282 ---EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPML------NPKTIVKLFDSIDAWRKP 332 +Q+ L+VP + A A + +P L + ++ KL A + P Sbjct: 292 SKLKQVSHNLKVPKKTTQFAASYANCSGYLAAYPYLGQHSDSDANSLAKLIVLTKADKDP 351 Query: 333 QRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL 392 + +L + E + + + + ++ +G I L Sbjct: 352 SELHELIQLHKVIEMAWQQLE---------MTDFIKAYTQISMSD-IDPDLQGSAIGTAL 401 Query: 393 TRRRIAAVASW 403 + RI A+A Sbjct: 402 SAARINAIAQI 412 >UniRef50_A3WPG7 TRNA nucleotidyltransferase n=1 Tax=Idiomarina baltica OS145 RepID=A3WPG7_9GAMM Length = 366 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 168/401 (41%), Positives = 225/401 (56%), Gaps = 43/401 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 + IYLVGGAVRD LLG PV D+D+VVVG+TP +ML GYQQVG+DFPVFLHPQT EEYAL Sbjct: 5 LDIYLVGGAVRDQLLGCPVGDKDYVVVGATPDQMLALGYQQVGKDFPVFLHPQTREEYAL 64 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK G GYTGF +TL DL+RRDLTINA+A+D++G +IDPY G D++ +L Sbjct: 65 ARTERKQGQGYTGFQVNTETTITLTQDLERRDLTINAIAEDEHGHLIDPYGGQQDIERKL 124 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLRVLRVARF AR+ LGF +A ET LM+ M +GEL+ L ERVW+E Sbjct: 125 LRHVSPAFVEDPLRVLRVARFYARFKPLGFTVAQETKNLMKAMARSGELKTLVAERVWRE 184 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E AL T P F ++L + A + PE+ ++ L + Sbjct: 185 WEKALATDAPAAFIELLVEIDAWSQVMPELT----------------ISPSSVSDLQQIS 228 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 ++ RFATL G + L Q+LR+PN+ + LA+ Sbjct: 229 QVTQCTHTRFATLMLRQGDTFE------------------INLLSQKLRLPNQYKRLAQA 270 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 V + L+P +++L + D WR+P+R+EQL + Sbjct: 271 VFGSRKWLLQPSPLSPAQLLELANGADMWRQPERIEQL---------AHIRHIARPNISD 321 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVA 401 + A A+S+ ++V G KG E+ + L R+ A+ Sbjct: 322 GCIVSALTQARSIDASSIVARGLKGPEVGQVLNEERLLAIK 362 >UniRef50_Q5QY23 CCA-adding enzyme n=1 Tax=Idiomarina loihiensis RepID=CCA_IDILO Length = 370 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 177/405 (43%), Positives = 237/405 (58%), Gaps = 35/405 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M +YLVGGAVRD LL LPV +RDWVVVG+ +++L G+ QVG+DFPVFLHP T EEYAL Sbjct: 1 MDVYLVGGAVRDKLLKLPVHERDWVVVGARAEDLLKQGFLQVGKDFPVFLHPSTREEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG G+T F +A+PDVTLEDDL RRDLTINA+AQ ++GEI+DPYNG+ D++ R Sbjct: 61 ARTERKSGKGHTSFDVFASPDVTLEDDLARRDLTINAIAQSEDGEIVDPYNGVQDIKARK 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRVLRVARFAAR+AHL F +A+ET +++EM+ + EL HL PERVW+E Sbjct: 121 LRHVSEAFTEDPLRVLRVARFAARFAHLDFTVAEETQQMLQEMSASQELSHLVPERVWRE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E +L T+ P VF +LRD AL + P I A L + Sbjct: 181 WEKSLLTQTPTVFLTLLRDIQALSQVLPGITADDSQLQR----------------LQRTS 224 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 S V +RFA+L + ++Q C++L +PN RD A L Sbjct: 225 AYSDSVTLRFASLF------------------IEQETPESLKQFCRQLAIPNHYRDSALL 266 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 D I T + + L ID WR+P+++EQL +A+ + + + Q Sbjct: 267 ARNHEDFITTPELPEKAQLAALLKQIDYWRRPEKLEQLLQLRQAEY-SESKQQKSIAAQH 325 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKE 405 + LR E A ++ + + GF G + + L +R +A Sbjct: 326 KKLRSGAEKAAALNAGTLQQQGFTGKALGDALREQREQILAEALN 370 >UniRef50_D1VT34 tRNA adenylyltransferase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VT34_9FIRM Length = 445 Score = 331 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 93/419 (22%), Positives = 162/419 (38%), Gaps = 31/419 (7%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ----QVGRDFPVFLHPQTH-- 55 K Y+VGG +RD LLG+ D D + + P ++ + + G + Sbjct: 18 KSYIVGGCLRDILLGIRPNDFD-ITTNARPSQVKEVFREYKIFHYGIKYGTITVEYRDRL 76 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 E R+E +++DDL RRD TINA+A D + I DP+NG+ D Sbjct: 77 YEITTFRSEGTYSDNRRPDR--VLFLDSIDDDLARRDFTINAMAMDKSYNIYDPFNGIRD 134 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L+N+++R ED LR+LR RFA R+ F + +E + + L+++ Sbjct: 135 LKNKIIRACGDANKRIEEDALRILRAIRFATRFK---FYLDEELFDAI--SLNRNLLKNI 189 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ER++ E +T NP F ++ + G L +LFP + G WH + H Sbjct: 190 ARERIFSEICKIITYDNPSYGFLLMEETGILDILFPSLRKTVGFDQKTPWHDR-NLFDHL 248 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLR 289 L + + + +RFA + HD+ K LT + GH G + E + + + Sbjct: 249 LCVMD---NVPNDLAIRFAAIFHDIAKPLTLKIDGDGTGHFLGHDALGATMAEDILKYYK 305 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEA----- 344 P + + ++ + H + ++ K + + + E L Sbjct: 306 APKALIEKVSILIKEHMKVQ--EVMTDKALRRQIKRVGRENILDLYELLYADCVCTRYDR 363 Query: 345 DVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASW 403 D + E + ++E GF G I + L ++ Sbjct: 364 DGSFILNRKKRIEELLDEKEMKKEKFLEINGYDLIELGFHGKIIGQILKYAENLVLSDT 422 >UniRef50_A1U5G5 CCA-adding enzyme n=3 Tax=Alteromonadales RepID=CCA_MARAV Length = 373 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 174/405 (42%), Positives = 226/405 (55%), Gaps = 41/405 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ YLVGGAVRD LLGL VKDRDWVVVG+TP++M+ G++QVG DFPVFLHP T EEYAL Sbjct: 1 MQTYLVGGAVRDKLLGLGVKDRDWVVVGATPEDMIQRGFKQVGADFPVFLHPDTGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK G GY GF+ Y+APDV+LEDDL+RRDLTINA+A+ +NG+++DP+NG DL+ + Sbjct: 61 ARTERKQGRGYHGFSVYSAPDVSLEDDLRRRDLTINAMAETENGDLVDPFNGHADLEQKK 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLR+LR ARFAAR LGF I ET+ALMR+M +GEL L PERVW+E Sbjct: 121 LRHVSEAFAEDPLRILRTARFAARLQPLGFSICRETMALMRQMVTSGELGDLVPERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 + AL + P VFF VLR+ GAL+VL PE+ L L Sbjct: 181 VQRALHEQAPGVFFDVLRELGALQVLIPELTDEQPFRQG-------------LSALQCIH 227 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +A L + ++ PN+ R+L L Sbjct: 228 RKQGSTAQHYAALL-------------------SGVPEPDAVARAKAMKSPNDCRELTHL 268 Query: 301 VAEFHDLIHTF---PMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY 357 V F ++ L P+ ++L D D WR+P R L T +S Sbjct: 269 VGLFMAQLNGASPETRLTPELAMELLDKADFWRRPDRFGVLLGTLAC------TLQSEPD 322 Query: 358 PQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 + L A AQSV ++ G +G + E + + R+A + Sbjct: 323 HLIQQLELAAHRAQSVTPHPFLQKGIQGKALGEAIRKERVARITE 367 >UniRef50_C4GD15 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GD15_9FIRM Length = 461 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 103/423 (24%), Positives = 174/423 (41%), Gaps = 41/423 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYA 59 + Y VGG VRD++LG D D + + P+E+ + G H Y Sbjct: 28 EAYAVGGCVRDSVLGRIPDDWD-ITSSACPREIKALFSHTIDTGIQHGTVTVMLDHIGYE 86 Query: 60 LARTERKSGSGYTGFTCYAAPDV-TLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 L T R G G +L +DLKRRD TINA+A + ++D ++G+GDL+ Sbjct: 87 L-TTYRVDGEYLDGRHPRTVRYTPSLTEDLKRRDFTINAMAYHPDRGLVDEFDGIGDLKR 145 Query: 119 RLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +L+R V F ED LR+LR RFAA+ LGF + +T + +R++ A L+ ++ E Sbjct: 146 KLVRCVGDPHQRFTEDALRMLRAVRFAAQ---LGFGLDADTASAIRDL--AENLKKVSAE 200 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E + + +P ++ + G V PE DA P H D G HTL+ Sbjct: 201 RIRVELMKTICSPHPA-CLEMAYELGLTAVFLPEFDACMRTPQNTPHH-FTDVGHHTLLV 258 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGL---TPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 + + +R A L HD+ K + T GH G ++ ++ +RLR Sbjct: 259 MQ---GVPDDPVLRLAALLHDIAKPVCRTTDERGVDHFKGHPKEGARMAGEILRRLRFDK 315 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 + D + +HD P ++ Q +L AD+ ++ + Sbjct: 316 DTTDRVVQLVCYHD-------ERPGADLRSVRRAMVRVGAQAFPRLFALKRADMLAQSDY 368 Query: 353 ESADYP-QGRWLREAWEVA-----------QSVPTKAVVEAGF-KGVEIREELTRRRIAA 399 + + + E ++ + ++E G +G + E L+ Sbjct: 369 KREEKLGEIDDFERLREQILQKKEALSVGDLAISGRDLLEMGLPQGRLVGEVLSALLEDV 428 Query: 400 VAS 402 + Sbjct: 429 LEE 431 >UniRef50_A6VU49 Polynucleotide adenylyltransferase region n=2 Tax=Marinomonas RepID=A6VU49_MARMS Length = 365 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 165/404 (40%), Positives = 225/404 (55%), Gaps = 48/404 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 ++YLVGGAVRDALL LPV D DWVV G+TP+++ G+QQVG+ FPVFLHP + EEYALA Sbjct: 6 QVYLVGGAVRDALLELPVIDHDWVVTGATPEQLEKKGFQQVGKQFPVFLHPISKEEYALA 65 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 R E+K G GYTGF C +P+++LE+DL+RRDLTINA+AQD NG +IDP+NG DL +R+ Sbjct: 66 RKEKKQGEGYTGFICDFSPEISLEEDLERRDLTINAIAQDQNGTLIDPFNGQQDLLDRVF 125 Query: 122 RHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKET 181 RHVS AF EDPLRVLRVARFAAR+ H GF IA ET++LMRE++ +GEL L+ ER+WKE Sbjct: 126 RHVSNAFVEDPLRVLRVARFAARFHHFGFTIAPETMSLMREISSSGELSALSAERIWKEL 185 Query: 182 ESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAM 241 E AL TR+ VFF VL+D AL LFPE + M + Sbjct: 186 EKALNTRHANVFFSVLKDANALDKLFPEF-----------------IWEDSQMLTDILNQ 228 Query: 242 LSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLV 301 + R+A LC + + + QL QR+R PN+ + LA Sbjct: 229 VGLTPAQRWAILCKN-------------------TPLTELTQLHQRIRSPNQFKILAEQT 269 Query: 302 AEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGR 361 F + H ++ T S++A +KPQ L + Sbjct: 270 RSFLENQHI--PMDSTTWENWLISVNAIKKPQPFILLIAI----------LSRLTNSKVE 317 Query: 362 WLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKE 405 ++ + + ++++ GF G E+ + L + R A+ Sbjct: 318 DWQKLRDTIAVINAASLIKQGFSGAELGQALKKVRTEALDKTLS 361 >UniRef50_UPI0001C37B0D poly A polymerase family protein n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37B0D Length = 439 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 93/431 (21%), Positives = 165/431 (38%), Gaps = 44/431 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEY 58 + Y VGG VRD ++G D D + + P++++ A Y+ + Sbjct: 18 FEAYTVGGCVRDTIMGRSAHDTD-ITTNALPEQVIAAFDGYKVIPTGLKHGTVTILKNSV 76 Query: 59 ALARTERKSGSGYTG--FTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 T + Y ++ +DL RRD T+NA+A D +G I DP+ G D+ Sbjct: 77 PYEITTYRIDGEYKDSRRPETVEFTASITEDLARRDFTMNAIAMDRHGNIADPFGGKEDI 136 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +N ++R V F ED LR++R RFAA+ LGF I ++T + M L++++ Sbjct: 137 ENGIIRCVGDPVQRFTEDALRIMRAVRFAAQ---LGFSIEEKTAEAVHSMKER--LKNIS 191 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E + L R L + + PE + G + +H D HT+ Sbjct: 192 MERIRSELDKILCGRYCVEVL--LEYSDIITTIIPEFEPSIGFDQHSPYH-RYDVWEHTV 248 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRV 290 + A V +R A L HD+ K HGP G ++ +++ +R++ Sbjct: 249 RAVGFAPQ--DNVKMRTALLFHDIAKPACATFDANCRGHFKKHGPVGAEMTKEIMKRMKY 306 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 E A ++ H + + + K+ I +L + D + Sbjct: 307 DGETMTYAVMLIARHSK----KVFDRIAVKKMMADIG----DDLFFELMELKKCDNLAKN 358 Query: 351 GFESADYPQGRWLREAWEVA-----------QSVPTKAVVEAGFKGVEIREELTRRRIAA 399 F + L + + +V ++ G KG ++ L Sbjct: 359 DFVFEENELFDRLMDEGRLLIENNECRGLRNLAVSGNDLMAIGLKGRDVGAALKEL---- 414 Query: 400 VASWKEQRCPK 410 + E++ P Sbjct: 415 LTLVLEEKLPN 425 >UniRef50_UPI0000E0E587 tRNA nucleotidyltransferase n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=UPI0000E0E587 Length = 378 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 152/406 (37%), Positives = 217/406 (53%), Gaps = 28/406 (6%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ YLVGGAVRD LL +KDRD+VVVG++P++++ GY+ VG+DFPVFLHP+T EEYAL Sbjct: 1 MQTYLVGGAVRDTLLKRRIKDRDYVVVGASPEQLVALGYKPVGKDFPVFLHPETQEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR ERK G GY GF+ VTLE+DL RRDLTINA+A DD G IIDP+NG DL +R+ Sbjct: 61 ARVERKVGLGYGGFSFVTDATVTLEEDLSRRDLTINAMAMDDQGNIIDPFNGQADLAHRI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 +HVSPAF EDPLRVLR+ARF ARY GF IA ET+ LM+++ H+GEL L+ RVW+E Sbjct: 121 FKHVSPAFVEDPLRVLRIARFMARYHQYGFTIAPETVELMKKIGHSGELAALSAPRVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 T AL P+++F VL D L F ++ A H L Sbjct: 181 TALALGEFAPEIYFSVLIDTLCLSPWFDQLSASIR-----NIESLALAFQHAKGLLESGE 235 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + + A L G P + V Q L +P ++D L Sbjct: 236 VTQDE---HLAITTTLLTLGNKPQD---------------VSAWTQLLPLPTFVQDCILL 277 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + + L + +++ + D R+PQR+ + S Sbjct: 278 THRHMNTMEQLDTLEAQQLLECLNQCDIHRRPQRLALMIKVLSC-----YEQVSDFTLNY 332 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 +L + A+SV + ++ G++G +I+ +L ++A +++ + Sbjct: 333 LFLENVVQAAKSVNVQDIIAQGYQGADIKTQLQHAQLAQISTLLNR 378 >UniRef50_C0R197 PolyA polymerase n=2 Tax=Brachyspira RepID=C0R197_BRAHW Length = 464 Score = 327 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 98/420 (23%), Positives = 174/420 (41%), Gaps = 41/420 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 + +LVGGAVRD+++G+ + D + + P+++ + G L Sbjct: 24 FQCFLVGGAVRDSIMGITPHEYD-ITTDARPEDVQRIFKYTIPTGIKHGTILVIIEDMHV 82 Query: 59 ALARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 + T R G+ G + ++E+DL RRDLTINA+A + +G +ID ++G+ D+ Sbjct: 83 EI-TTFRSDGNYSDGRHPDHVEYATSIEEDLPRRDLTINAMAYNILDGSLIDMFDGMKDI 141 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + ++++ V F ED LR++R RFA + L F I ET + T G L + Sbjct: 142 KKKIVKSVGNPYERFSEDGLRIMRAIRFATK---LDFDIEKETFDAITHST--GMLASIA 196 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ +E L ++NP ++LR G L ++ PE+ FGV + D H L Sbjct: 197 AERIREEFNGILLSKNPFRGLELLRKTGVLSLILPELMQGFGVNQNKFH--KYDVYYHIL 254 Query: 234 MTLSMAAMLSPQ---VDVRFATLCHDLGKGLTPPELW----PRHHGHGPAGVKLVEQLCQ 286 T+ L + + VR A L HD+ K + ++ P ++ H G + +++ + Sbjct: 255 HTIQSVEPLETEELTLLVRLAALFHDIAKPMVQKKVSKQDDPVYYNHEVVGANIAKKIMK 314 Query: 287 RLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 RL+ N D L+ H + + + +I + + L EAD Sbjct: 315 RLKYSNSEIDFVTLLVRQHM-FYYQDEWTDGAVRRFMRAIGV----ENIRPLLRLREADR 369 Query: 347 RGRTGFESADYPQGRWLREAWEVA-----------QSVPTKAVVEA-GF-KGVEIREELT 393 G + + L + + ++ G I + L Sbjct: 370 LGSGNRKDKESKAIPKLLARIDKIIEEENAITVKDLKIDGNDLINEFNLNPGPLIGKILN 429 >UniRef50_UPI0001BC63FF Poly(A) polymerase n=3 Tax=Fusobacterium RepID=UPI0001BC63FF Length = 446 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 101/435 (23%), Positives = 181/435 (41%), Gaps = 42/435 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ----QVGRDFPVFLHPQTHEE 57 + YLVGG+VRD LLG V D D+ + + + + + G+ F V EE Sbjct: 24 EGYLVGGSVRDILLGREVHDFDFC-TNLSYETLKQIFSKYFCIETGKAFGVLRLRIDGEE 82 Query: 58 YALARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 + +A +S G G +E+DL RRD +INA+A + ++D Y+ DL Sbjct: 83 FEIAS--FRSEKGSDGRRPEEVIFVKRIEEDLARRDFSINAMAYNQEKGLLDYYDAQKDL 140 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +N+++R + ED LR++R RF ++ LGF + T + M G L + Sbjct: 141 ENKVIRFIGNPRERIQEDGLRIMRAFRFMSQ---LGFSLESNTKKAI--MEEKGMLGKIA 195 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 R+ +E + + ++ G L ++ P + +L+ +H D HT+ Sbjct: 196 KSRITEEWNKLILGDFVVETLEEMKKTGVLELILPSLKSLYHFNQNNPYHS-YDLWEHTM 254 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTP----PELWPRHHGHGPAGVKLVEQLCQ-RL 288 + + +D+R A + HD+GK LT + +GH G + + + Q L Sbjct: 255 QVVK---SVPKDLDLRLAAIFHDIGKPLTKTIDEKTGYYHFYGHEKKGAERIRSILQEEL 311 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 N+ R + E H ++H + K I KL +R E+L S AD G Sbjct: 312 EESNKTRKEVEFLIENHMILHR--NSSEKGIKKLISHFGI----ERTEKLIKLSIADNLG 365 Query: 349 RTGFESADYPQGRWLREAWEV-------AQSVPTKAVVEAGFKGVEIREE----LTRRRI 397 + + + + E ++ A+++ G++G EI++ L Sbjct: 366 KNLQQLRENNVADLFYKIVEKQKIPTLQELAIDGFALMKLGYQGKEIQKIKEYLLNEILE 425 Query: 398 AAVASWKEQRCPKPE 412 + + + K + Sbjct: 426 GKIENKETALLSKAK 440 >UniRef50_C1IAF4 PolyA polymerase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1IAF4_9CLOT Length = 448 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 92/424 (21%), Positives = 164/424 (38%), Gaps = 40/424 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTH--E 56 + ++VGG VRD++L KD D + + P++ L + + G + Sbjct: 21 FEAFMVGGCVRDSILNNSPKDYD-ITTSAKPEDTLSLFEKTIPTGIKHGTVTVLINNNSY 79 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE + DDL RRD TINALA + + ++D +NG+ D+ Sbjct: 80 EVTTYRTEGNYLDNRRP--SSVNFVSDIRDDLSRRDFTINALAYNKSAGLVDYFNGISDI 137 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +N ++R V F ED LR+LR RF+ + L F I +ET + + + + +++ Sbjct: 138 KNSIIRCVGDADKRFKEDALRMLRAVRFSCQ---LNFDIEEETYNAI--LNNNKLISNIS 192 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E L + NP +L+D G L + PEI+ L H + HTL Sbjct: 193 FERIRDELCKILISDNPSKGLILLKDTGLLGAILPEINNLVNFTPKCNNHNN-NVFKHTL 251 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRV 290 + L HD+GK T + H G + ++ +LR Sbjct: 252 NVIDNTHNNLLLRLSA---LLHDVGKLNTLTHNENGFYYFPNHNIEGSLMTRKILSKLRF 308 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 N ++ + E H +++ + + KL ++I + + L AD+ Sbjct: 309 DNNTINIVCKLIEHHLVLNVNYLPTKFEVKKLLNTIG----KEYIYLLFDLQRADINSLD 364 Query: 351 GFESADYPQGRWLREAWEVAQS-----------VPTKAVVEA-GFK-GVEIREELTRRRI 397 + + ++ S + + ++++ K G I L Sbjct: 365 NPKIFL-AKVDYIDNLVSEILSNNEPLKIKDLNISGETLIKSFNLKPGKLIGYTLNFLLD 423 Query: 398 AAVA 401 + Sbjct: 424 KVLE 427 >UniRef50_A0Z6Y3 TRNA nucleotidyltransferase, putative n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z6Y3_9GAMM Length = 372 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 172/406 (42%), Positives = 229/406 (56%), Gaps = 41/406 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIY VGGAVRD LLG P + DWVVVG TPQ ++D G++QVGRDFPVFLHP+T EEYAL Sbjct: 1 MKIYRVGGAVRDELLGYPHSETDWVVVGGTPQALVDQGFRQVGRDFPVFLHPETQEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GY GF +AAP VTLE+DL RRDLTINA+A DD+G ++DPY G DL+ + Sbjct: 61 ARTERKSGFGYHGFEVHAAPSVTLEEDLTRRDLTINAMAMDDDGVLVDPYGGKRDLEAKC 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSP F EDPLRVLRVARFAARY LGF +A+ETL LM + GEL HL ER+W E Sbjct: 121 LRHVSPHFVEDPLRVLRVARFAARYYALGFTVAEETLDLMSTIVAQGELGHLATERIWVE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 TE AL ++P+++F+ LR CGA+ L P + G+ LS AA Sbjct: 181 TERALGEQHPEIYFETLRQCGAMATLMPAVAVTSGIE-----------------RLSRAA 223 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + + D R+A L + + PN+ RDLA Sbjct: 224 QFTNRTDCRWAILL-------------------SELPSNQARATSEARKAPNQFRDLAER 264 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + + +P + L + +DA R+P+ + + A + + Sbjct: 265 LTT-WRPQTKQALRDPSECMSLLEGLDALRRPEPFDGFCEAAAALESNTSAKHPSCIA-- 321 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 L++A E A +V + ++E G G + + L R+AA+A+ + Sbjct: 322 --LQQAKEAANTVKAQTLLETGLTGPALGKALRESRVAAIAAVLTK 365 >UniRef50_A0Y839 TRNA nucleotidyltransferase, putative n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y839_9GAMM Length = 367 Score = 323 bits (828), Expect = 9e-87, Method: Composition-based stats. Identities = 182/402 (45%), Positives = 243/402 (60%), Gaps = 45/402 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD LLG P +RDWVVVG+T +++++ GYQ VG+DFPVFLHP+T EEYAL Sbjct: 1 MKNYLVGGAVRDKLLGYPYVERDWVVVGATAEQLINLGYQPVGKDFPVFLHPKTKEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GYTGF CYA+P+VTLE+DL+RRDLTINA+A+DD+G +IDPY G DL + Sbjct: 61 ARTERKSGPGYTGFDCYASPEVTLEEDLQRRDLTINAIAEDDDGTLIDPYGGQQDLDKGI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLR+LRVARF+ARYAHLGF +ADETL LM++++ + EL L ERVWKE Sbjct: 121 LRHVSPAFEEDPLRILRVARFSARYAHLGFTLADETLLLMKKISASDELLALPAERVWKE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 +L+ R+P +FF L+ C AL+ L PE+D F HT++ A Sbjct: 181 MHRSLSERSPDIFFVTLQQCDALKKLMPELDESF----------------HTIIEPLKQA 224 Query: 241 MLSPQVD-VRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 +S D + FA L + T E CQR++ P E RDLA Sbjct: 225 AISGLPDVICFAILFAHIDTVET-------------------ENFCQRMKAPREFRDLAI 265 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 LV+ F +P ++ L +S+D +R+P+R + + + Sbjct: 266 LVSRFSISCKD-DFSSPDQLLTLLESLDPFRRPERFGLFLQSVQLLYN--------NDRA 316 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVA 401 ++++ +S+ ++ G KG EI E L RRI A+ Sbjct: 317 INQMKKSLRACKSIDAASLAREGLKGKEIAEALRSRRIEAMT 358 >UniRef50_C7MMX1 Uncharacterized domain HDIG-containing protein n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MMX1_CRYCD Length = 451 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 97/429 (22%), Positives = 155/429 (36%), Gaps = 43/429 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV------GRDFPVFLHPQTH 55 + +LVGG VRD L+G P+ D D + ++ QE + G Sbjct: 23 EAWLVGGCVRDGLIGRPIHDID-IASSASWQETVRLCQAAGMTTVETGTQHGTVTIIADG 81 Query: 56 EEYALARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 + + T R G G P ++++DL RRD TINA+A + + + DPY G Sbjct: 82 TPFEV-TTFRGEGQYQDGRHPEYVFPVDSIDEDLARRDFTINAMAWNPSRGLHDPYGGQA 140 Query: 115 DLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 D +++R V F ED LR+LR ARFA++ LGF + ET M E H L Sbjct: 141 DAAAKIIRAVGKAQQRFDEDALRILRGARFASQ---LGFTLETETAHAMNEAAH--NLAR 195 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++ ER+ E ++ L + + PE+ G +K+H D H Sbjct: 196 ISAERIAAEMDALLKGSFVHDAL--MNCAPVICAAIPELSCTCGFDQQSKYHS-FDVYEH 252 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRL 288 + VR+ HD+GK T H G + L +RL Sbjct: 253 LAWATQQT---PKKSLVRWCAFLHDIGKPATMVVDEAGAGHFPDHAAVGEAMARNLLKRL 309 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 R P A L+ +HD+ P+ ++ +D + L AD Sbjct: 310 RFPTRFIHDACLLIRYHDIPIA---PTPRATKRMLQRLDG--REDLFRDLCALKRADSLA 364 Query: 349 RTGFESADYPQGRWLREAWEV-----------AQSVPTKAVVEAGFK-GVEIREELTRRR 396 + + A ++ V++ G G + + L Sbjct: 365 HAPQWRGGTKAADAAEKCLDAIIEQNAAFSRSALAINGNDVIKLGVPAGPAVGKALDAAL 424 Query: 397 IAAVASWKE 405 A + + Sbjct: 425 NAVIDETRR 433 >UniRef50_Q7P2R0 POLY(A) POLYMERASE n=10 Tax=Fusobacterium RepID=Q7P2R0_FUSNV Length = 451 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 103/432 (23%), Positives = 182/432 (42%), Gaps = 43/432 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY----QQVGRDFPVFLHPQTHEEYA 59 Y+VGGA+RD LLGL KD D+ + ++ G+ F V + +Y Sbjct: 27 YIVGGAIRDILLGLKPKDVDF-TTNLPYGTLKTLFSEYTPKETGKSFGVLRIRINNIDYE 85 Query: 60 LART-----ERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 +A+ E K G + + +DL RRD TINA+A + IID YNG Sbjct: 86 IAKFRKDNYEEKDGLKIIPEEKKVSFVDDIRNDLARRDFTINAMAYNQKEGIIDLYNGQK 145 Query: 115 DLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 D++NR++ V EDPLRVLR RF +R L F +++ T+ +++ L++ Sbjct: 146 DIENRIINFVGKSEERIIEDPLRVLRAFRFMSR---LNFSLSENTIEAIKK--QKELLKN 200 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++ ER+ E L +N + +++D G L ++ PE A + H +D H Sbjct: 201 ISEERITMEFSKLLLGKNIKNTLTLMKDTGVLELIIPEFKATYDFNQCNPHH-NLDLFNH 259 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRL 288 + + + + +++R++ L HD+ K + E + H G + + R+ Sbjct: 260 IINVV---SKVPADLELRYSALLHDIAKPIVQTFDEEGIAHYKTHEIVGADMARDILTRM 316 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 +VP + D + + H +++ + K KL + + +L AD Sbjct: 317 KVPVKFIDTVVEIIKKHMILYR--DVTDKKFNKLLSEMGY----NNLWRLIEHCNADNES 370 Query: 349 RTGFESADYP-QGRWLREAWEV-------AQSVPTKAVVEAGFKGVEIREE----LTRRR 396 + + L+ A E +V K ++E F G EI + L + Sbjct: 371 KNNEVVSTENDLHERLKRAVEKQMQVTVNDLAVNGKDLIELDFTGTEIGKIKKELLDKYL 430 Query: 397 IAAVASWKEQRC 408 + + KE+ Sbjct: 431 SEEIQNEKEEML 442 >UniRef50_Q1QZ27 Polynucleotide adenylyltransferase region n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QZ27_CHRSD Length = 384 Score = 321 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 180/408 (44%), Positives = 229/408 (56%), Gaps = 44/408 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 + +Y VGGAVRDA LG PV D DWVVVG+TP+ + G+ VGRDFPVFLHP THEEYAL Sbjct: 16 LDVYRVGGAVRDARLGWPVTDEDWVVVGATPEALTARGFVPVGRDFPVFLHPVTHEEYAL 75 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERK G GYTGF +A+P+VTLE+DL RRDLTINA+A+D +G ++DP++G DL R+ Sbjct: 76 ARTERKQGHGYTGFVVHASPEVTLEEDLARRDLTINAMAEDRDGRLVDPFDGRQDLDARV 135 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLRVLR ARF ARY LGF IAD+T LMR + GE+ HL ERVW+E Sbjct: 136 LRHVSEAFVEDPLRVLRTARFWARYRELGFVIADDTKRLMRGLCDNGEIAHLVAERVWQE 195 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 T AL +P +FQ L +CGAL V PE+DA + G + L Sbjct: 196 TVKALGEPHPMAYFQALHECGALAVWMPELDAS----------DMLARGEAAMARLPAGG 245 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 S R D + E LC+RLRVPN RDLAR Sbjct: 246 EPSQWRWARLLEALEDEAR----------------------EALCERLRVPNAWRDLARQ 283 Query: 301 VA--EFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYP 358 VA H L ++ FD+IDAWR+ +RV L + Sbjct: 284 VARTRALQRQHGDGGLEGSDVMAWFDAIDAWRRSERVAPL----------QRYLAMETPA 333 Query: 359 QGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 + EAW+ A ++ +A++E G++G + + L +RR A + Q Sbjct: 334 LAACVDEAWQAASAIQPQALLEEGYRGKALGDALAQRRQARIDEVVGQ 381 >UniRef50_B5JXP2 tRNA nucleotidyltransferase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JXP2_9GAMM Length = 392 Score = 321 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 168/410 (40%), Positives = 227/410 (55%), Gaps = 34/410 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+IYLVGGAVRD LLGL VKDRDWVVVG+T ++ML GYQQVGR FPVFL PQ+ EE+AL Sbjct: 1 MQIYLVGGAVRDQLLGLDVKDRDWVVVGATAEDMLAQGYQQVGRQFPVFLDPQSKEEHAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE K G GY+GF +AAPDVTLE DL RRDLTINA+AQD G++ID + G DL + Sbjct: 61 ARTETKIGPGYSGFEVHAAPDVTLEQDLLRRDLTINAMAQDRQGQLIDEHAGQADLSAGV 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHL----GFRIADETLALMREMTHAGELEHLTPER 176 LRH+SPAF EDPLR+LRVARFAAR+ F +A ET L+ +M A E+E L+ ER Sbjct: 121 LRHISPAFREDPLRILRVARFAARFCQPLLARDFEVARETAQLLCKMVEANEVEALSKER 180 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLF-PEIDALFGVPAPAKWHPEIDTGIHTLMT 235 W+E E A+ P+ F +V+ CGAL+ L+ P + W + Sbjct: 181 AWQEFERAMGETQPRRFLEVMYQCGALQRLWAPAV-------QSDDW---SELWPRLREV 230 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 + LS +VRFA + L + L +++ P + Sbjct: 231 ADIVPALSASPEVRFAAIIGVL-------------------PAPQAKLLSEQMGAPKRFK 271 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 LA LVA + + P ++ L + +DA+RKP+R++ L EA +R Sbjct: 272 QLAELVATHANTVKHSTRQPPPAVLNLLNKMDAFRKPERLDDALLACEAAIRSLPKERQR 331 Query: 356 DYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKE 405 PQ +L + A +V +++ +G + EE+ R AA+ K Sbjct: 332 PQPQREYLLSCYYAASAVTAADMMKLRLEGKALAEEIDTHRKAAIFKVKR 381 >UniRef50_C8PZE9 Multifunctional CCA protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZE9_9GAMM Length = 393 Score = 320 bits (821), Expect = 5e-86, Method: Composition-based stats. Identities = 156/423 (36%), Positives = 207/423 (48%), Gaps = 47/423 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M++YLVGGAVRD +L V + D+VVVG+TP++ML+ G+ QVG DFPVFLHP+TH+EYAL Sbjct: 1 MQVYLVGGAVRDYVLAREVTEHDYVVVGATPEQMLELGFSQVGADFPVFLHPRTHDEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG--------------EI 106 ARTERKSG+GY GF +A VTLE+DL RRDLTINA+A + NG +I Sbjct: 61 ARTERKSGNGYLGFNVHADAAVTLEEDLARRDLTINAMAIEVNGLFDCGFKQGKFDARDI 120 Query: 107 IDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 IDPY GL D+Q + LRHVS AF EDP+RVLR+ARFA+RYA LGF + + T L +M A Sbjct: 121 IDPYGGLADIQQKKLRHVSIAFAEDPVRVLRLARFASRYAPLGFTVDESTTKLTSQMKAA 180 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 GEL HL ERVW ET ALT P ++F L L V+ P++ Sbjct: 181 GELSHLVAERVWSETSKALTQAWPDIYFDTLYQLNVLDVIMPKLYQASNDNPKQ------ 234 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFA--TLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQL 284 L L MA ++FA C + L P + Sbjct: 235 --WQLMLSALRMAGEQQADNLIKFALVATCFKSDQQLNNPTTEYL-------------EF 279 Query: 285 CQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEA 344 CQ L+VP L + E D + F L + + +L ++ + +EQ Sbjct: 280 CQGLKVPKNTERLGLFILEHFDKLKNFDHLTAEQLFELLRLTNSLKDTSLLEQALQVVHL 339 Query: 345 DVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWK 404 Q L + K V + G I E + + R+ + Sbjct: 340 ---------YQQVKQTALLATIKTQLTQISAKDV-ASELTGKHIGEAIDKLRLQKLEEIL 389 Query: 405 EQR 407 Sbjct: 390 NHP 392 >UniRef50_A3DF92 Metal dependent phosphohydrolase n=3 Tax=Clostridium thermocellum RepID=A3DF92_CLOTH Length = 442 Score = 319 bits (819), Expect = 8e-86, Method: Composition-based stats. Identities = 106/416 (25%), Positives = 171/416 (41%), Gaps = 49/416 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 K Y+VGG +RDA+LG D D V + P+++ + V Sbjct: 25 FKAYIVGGCIRDAILGKVPADWD-VATDAQPEDVKLIFDKIVETGIKHGTVTAVINGCNY 83 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 T +A T++DDL RD TINA+A IIDP+ G+ D++ + Sbjct: 84 EITTF--------RAPSSAKIPTIKDDLGLRDFTINAMAYHPEEGIIDPFLGMQDMEKSV 135 Query: 121 LRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +R V F EDPLR+LR R ++ LGF I L+ ++E + +E ++PER+ Sbjct: 136 IRAVGSPEDRFHEDPLRMLRAVRLSS---TLGFEIDRSVLSAIKE--NCKLIEKVSPERI 190 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 E L + P+ F VLR+ G L+ + PE D F +H + G+HTL T+S Sbjct: 191 RDELSKILISDRPKNFL-VLRETGLLKYVLPEFDICFDTGQNHPYHV-YNVGMHTLETVS 248 Query: 238 MAAMLSPQVDVRFATLCHDLGKGL---TPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + +R+ L HD+GK + T +GH V + +++ +RLR N+ Sbjct: 249 NIES---NLVLRWTMLLHDIGKPVVKTTDQNGTDHFYGHPEESVNIADKIMKRLRFDNKT 305 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + + + HD K++ K I L EAD +G+ Sbjct: 306 TNKVLRLIKHHDRRIEPNQ---KSVRKAVSIIG----KDIFPDLLKVQEADKKGQNP--Q 356 Query: 355 ADYPQGRWLREAWE--------------VAQSVPTKAVVEAGFKG-VEIREELTRR 395 + + L E + ++ ++ GF+ EI L Sbjct: 357 YLDERLKVLDEIKDIFFNLEKEGQILNLKDLALNGNDLLAMGFEQSREIGIILREL 412 >UniRef50_B4CZL9 tRNA adenylyltransferase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CZL9_9BACT Length = 447 Score = 319 bits (819), Expect = 9e-86, Method: Composition-based stats. Identities = 94/419 (22%), Positives = 156/419 (37%), Gaps = 37/419 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 Y GG VRD L+G+ D D + + P+++ + + + G F V + Q E+ Sbjct: 23 FIAYYAGGCVRDQLMGVEPHDYD-IATNAHPEQVQNLFRRTIAVGAHFGVIIVLQDDFEF 81 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQ 117 +A T R G G + T E+D RRD TIN L D G++ID G DL Sbjct: 82 QVA-TFRNDGQYIDGRRPESVSFATPEEDATRRDFTINGLFFDPIAGKLIDYVGGQQDLA 140 Query: 118 NRLLRHVSPAFGEDPLRVLR-----------VARFAARYAHLGFRIADETLALMREMTHA 166 ++LR + + RF A L F + T + +A Sbjct: 141 KKMLRAIGNPYD--------RLREDRLRLLRAVRFGA---TLCFDLDGATWRAV--CENA 187 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 + ++ ER+ +E + F +L + G + + PEI+AL G P ++HPE Sbjct: 188 RHIHEVSAERIREELVKIFLSPKRVRGFDLLDESGLMAAVLPEIEALKGCEQPPQFHPEG 247 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQ 283 D +HT + L + V + + L HD+GK T P+ R GH G ++ E Sbjct: 248 DVFVHTRIMLGLLPT-QVSVPLVLSVLFHDIGKPGTYAVDPDGRIRFSGHDKLGAEMTEA 306 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 L RLR D H + + + + +E + Sbjct: 307 LMSRLRFSRAEIDATVEAVANHMVFKDVQQMRVAKLKRFLARPHME---DELELHRVDCT 363 Query: 344 ADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVA 401 + +E + + E + + ++ G K G E L + + Sbjct: 364 SSHGMLDNYEYLKAKREEFANEPLIPPPLITGRELIALGLKPGPRFAEILEAVQSRQLE 422 >UniRef50_D1CJ19 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CJ19_THET1 Length = 484 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 106/413 (25%), Positives = 169/413 (40%), Gaps = 47/413 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY-------QQVGRDFPVF--LHP 52 ++Y VGG VRD+LLG V++ D+ + P+E+ VG F + Sbjct: 37 ELYAVGGCVRDSLLGKEVQELDF-ATSAHPEEIKRLLAPLRPDSVYTVGERFGTIGAIFG 95 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYN 111 E R E S ++LE+DL RRD T+NA+A D +G +IDP+ Sbjct: 96 PYRVEITTYRGEWYSPDSRKP---EVTFGISLEEDLSRRDFTVNAIAMDIPSGRLIDPFG 152 Query: 112 GLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G+ DL ++++R V F +DPLR++R RFAA +LGF+I T +R HA + Sbjct: 153 GVEDLHSKVIRAVGDPDARFRDDPLRLMRAVRFAA---NLGFKIEPRTAEAIR--RHAAQ 207 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 + ++ ERV E LT P V L D G ++ + PE+ L V H D Sbjct: 208 ICKISIERVRDELTRMLTGPAPDVAIAALVDLGLMQYIVPEVVELKQVSTGGGKHK--DI 265 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT--PPELWPRHHGHGPAGVKLVEQLCQ 286 IHTL + P + +R+A L HD+ K T + H G K+ E++ Sbjct: 266 FIHTLKVVRNT---PPDLVIRWAALLHDIAKPRTFGIRDGKVHFDHHETIGAKMAEEILS 322 Query: 287 RLRVPNEIRDLARLVAEFHDLIHTFPM--LNPKTIVKLFDSIDAWRKPQRVEQLALTSEA 344 RL + + V H +++ + +L +E L S+A Sbjct: 323 RLHYDRQTIEAVAKVVRMHTQANSYDPEVWTDGAVRRLVREAG-----DELEPLLALSQA 377 Query: 345 DVRGRTGFE-----SADYPQGRWLREAWEVA------QSVPTKAVVEAGFKGV 386 D+ + ++ E A + ++ +G Sbjct: 378 DITSYRRQKVEAGVQRVRELRERIQRLEEEAAIRELRPPLDGNDLMRIFGRGP 430 >UniRef50_Q2LST9 Poly A polymerase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LST9_SYNAS Length = 495 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 113/412 (27%), Positives = 169/412 (41%), Gaps = 42/412 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG--RDFPVFLHPQTHEEYA 59 + + VGG VRD L G+ D D +V ++P+ + + VG F + + + + Sbjct: 84 EAWFVGGCVRDYLRGVEAGDYD-IVTSASPEAIQALFPRTVGVGIRFGILIVIENGYSHE 142 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN-GEIIDPYNGLGDLQN 118 +A G +D+ RRD TINA+ QD + G IID G DL+ Sbjct: 143 VATYRSPGGYL---------------EDVLRRDFTINAMLQDPDTGRIIDEVGGRADLEG 187 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 R++R V F ED LR+LR RFAA +L F + ETL ++ HA E++ ++ E Sbjct: 188 RVIRAVGRPDERFAEDRLRMLRAVRFAA---NLAFSVEQETLEAIQ--AHAPEIQEVSVE 242 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 RV E LT ++L G L L PE+ A+ GV P K+HPE D HT+ Sbjct: 243 RVADELTRLLTLGGAGEGMRLLMKTGLLEELLPEVAAMRGVKQPPKFHPEGDVWTHTVKM 302 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPE--LWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 L + + + + + L HD+GK +GH G L E + +RLR P Sbjct: 303 LDLMS-IPADSRLAWGVLLHDVGKPDVQSRDHRGIHFYGHVQQGEILAEGILRRLRFPRA 361 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG-- 351 + + H + + +L S D + L D G G Sbjct: 362 DMECILGLIRCHMSFINVREMRTSRLKRLLRSPD-------FDLLLELHRLDCLGSNGVL 414 Query: 352 --FESADYPQGRWLREAWEVAQSVPTKAVVEAG-FKGVEIREELTRRRIAAV 400 +E Q E + K ++E G G RE L A + Sbjct: 415 DSYEYCLQKQRELTDEQLRPPPLLRGKDLLEMGYLPGALFREILNAVEDAQL 466 >UniRef50_C1XKS4 Uncharacterized domain HDIG-containing protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XKS4_MEIRU Length = 426 Score = 317 bits (812), Expect = 6e-85, Method: Composition-based stats. Identities = 125/404 (30%), Positives = 170/404 (42%), Gaps = 31/404 (7%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT----HEEY 58 +YLVGGAVRD LLG +D D+ + P+ ++ Q P L T + + Sbjct: 16 LYLVGGAVRDILLGETPEDLDF-ATSAPPEVVMRLAKAQGLEAIPTGLEHGTVTILIDHH 74 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 T + G A ++E+DL RRD TI A+A D G +IDPY G DL+ Sbjct: 75 PYEVTTFRRDVETYGRKARVAWGQSIEEDLARRDFTIGAIAMDAAGRVIDPYGGQQDLEA 134 Query: 119 RLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +LR V F ED LRV+R RFAARY GF I TL R L H+ E Sbjct: 135 GVLRAVGDPAQRFREDYLRVIRAGRFAARY---GFEIEPRTLQAAR-AAAPEVLSHVAIE 190 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 RV E + A P F + L D L+ L PE + + +WHPE D H L Sbjct: 191 RVTAEFDKAFQNGTPSRFLRYLYDLEILQRLIPEFEDTHLLLQNPRWHPEGDVLTHVLQV 250 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 + A R+ L HD+GK T PE W +GH G L+ ++ + LR+PN Sbjct: 251 VDRAP-----PPYRWHALLHDIGKKDTARWRPEGWYSFYGHERVGAGLIPRIARDLRLPN 305 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 +RD + H + F P I K + L EAD GR Sbjct: 306 HLRDELVVTTALHM-VPVFTKPTPAAIRKFQAQAGPH-----LPALRALYEADGAGRRSK 359 Query: 353 ESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRR 395 ES + + + V + + ++E G K G L Sbjct: 360 ESWKFFE----PQPVPVQPVLLGRHLIERGHKPGKVFSRMLKAA 399 >UniRef50_C7RG10 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=4 Tax=Anaerococcus RepID=C7RG10_ANAPD Length = 450 Score = 314 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 109/410 (26%), Positives = 175/410 (42%), Gaps = 38/410 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY----QQVGRDFPVFLHPQTHE 56 K + VGGAVRD+LL V D D + + P+E+ + +G+ F E Sbjct: 21 FKSFPVGGAVRDSLLSREVSDID-ITTDARPEEIEEVFRDFKLIDIGKRFGTIKVIIEGE 79 Query: 57 EYALARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 + + T RK + G L DDL+RRD TINA+A D GEIIDP+ G D Sbjct: 80 AFEI-TTFRKESAYRDGRHPTEVRFSDNLIDDLERRDFTINAMAFD-QGEIIDPFGGRDD 137 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L +++R V ED LR LR RFA R LGF I + +RE +A ++ + Sbjct: 138 LSMKVIRAVGDARERIDEDLLRSLRAVRFANR---LGFTIEESLKEAIRE--NANKINSI 192 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER+ E LT+ P +++ + G L +FPE+ G + +H + D H+ Sbjct: 193 SQERIASELSEILTSATPSSGIRLMDEVGLLAEIFPEVKRTVGFDQHSSYHSD-DVYNHS 251 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLR 289 L L + + VRF+ L HD+GK T R GH +++ + + L+ Sbjct: 252 LKVLDKS---PADLAVRFSALYHDVGKVYTFFLDERGEGRFFGHQNLSEEMLRKRLKELK 308 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 N+ D A + + H K+I KL + + QL AD+ Sbjct: 309 FSNKFIDDATSLVKRHMDCSN--TYTKKSIRKLLRRLGE----GNLRQLFDLQRADILST 362 Query: 350 TGFESADYPQGRWLREA--------WEVAQSVPTKAVVEAGF-KGVEIRE 390 ++++ G + ++ ++ G+ +G I + Sbjct: 363 KHPDTSNIDLGEEILTEVLKDNIPKKRSELAIDGNDLISMGYPQGKIIGD 412 >UniRef50_C8W673 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=38 Tax=Bacteria RepID=C8W673_DESAS Length = 584 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 102/418 (24%), Positives = 168/418 (40%), Gaps = 40/418 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 + +LVGG VRD L+G D D + + QE+L + V + + + Sbjct: 20 QAFLVGGCVRDLLMGSEPADYD-IATSAAAQEILSLFGKTVPIGERHGTISVLLDGFTVE 78 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 + K G+ P LE DL RD TINA+A D G DP+ G DL+ +++ Sbjct: 79 VSTFK------GYVREEGPGG-LEKDLSLRDFTINAMAIDGEGGFYDPFGGQKDLEQKII 131 Query: 122 RHVSP----AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R F EDPLR++R RF + GF + +T + + ++ PERV Sbjct: 132 RSPGNEPEQRFIEDPLRMMRAIRFCCSF---GFSLHPDTNKAI--AKNHALIQRSAPERV 186 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 +E L + P + ++L + G LR + PE +L K H + D HT+ L Sbjct: 187 REELNRILISDLPSLGIRLLAETGLLRHVMPEAISLVNFDQRDKPHSK-DVFEHTMAVLE 245 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 P+++VR A L HD+GK LT + +G+ G +++E + +RLR N+ Sbjct: 246 AT---PPRLNVRLAALLHDIGKTLTFSADERVTGHFYGYSLKGCRVIESILKRLRYDNKT 302 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEA---------D 345 + ++ H FP L ++ +L + ++ L A D Sbjct: 303 IENVSVLVGEHM--SCFPKLRDVSLKRLVKRVGEH----NLDDLFDLQRANILVSATPFD 356 Query: 346 VRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVAS 402 +V + ++ GF+ G E+ L A + Sbjct: 357 FSDLDAMRQGIERILNEKSPLRIKDLAVNGRDLIAIGFRSGPEMGRMLELLLDAVLDD 414 >UniRef50_A9KL25 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KL25_CLOPH Length = 459 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 100/416 (24%), Positives = 164/416 (39%), Gaps = 36/416 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 + Y VGG VRD+LLG D D + + P E+ + + G E + Sbjct: 21 FEGYAVGGCVRDSLLGRIPGDWD-ITTSANPCEVKQIFSRTIDTGIKHGTVTVMLGKEGF 79 Query: 59 ALARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 + T R G L +DLKRRD TINA+A + ++D + GL DLQ Sbjct: 80 EV-TTYRLDGEYEDNRHPKQVEYTKNLIEDLKRRDFTINAMAYNAKDGLVDEFEGLKDLQ 138 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++ +R V F ED LR+LR RF+A+ L F I DETLA +R A L++++ Sbjct: 139 DKKIRCVGSADQRFDEDALRILRAVRFSAQ---LNFTIEDETLAAIR--LKALNLKNISA 193 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ +E L + +P+ + + G V+ PE D + + G HTL Sbjct: 194 ERIREELNKLLLSSHPKK-IMIAYETGLTEVILPEFDQMLATKLQGPYQQS-SVGEHTLE 251 Query: 235 TLSM--------AAMLSPQVDVRFATLCHDLGKGLT-PPELWPRHHGHGPAGVKLVEQLC 285 L Q+ +A L HD+ K + + H G + + + Sbjct: 252 ALRYFTKNLSKDVEDKKQQLIYCWAILLHDVAKPVIKDNNPQVLNQEHQTKGANIAKSIL 311 Query: 286 QRLRVPNEIRDLARLVAEFHDL--------IHTFPMLNPKTIVKLFDSIDAWRKPQRVEQ 337 +RL+ NE + + +H+ I + + + + + Q Sbjct: 312 RRLKFDNETIESVTKLVYYHNFTFGHSKEDIRRATNQIGEKYMPMLFVLQECNMQTKDSQ 371 Query: 338 LALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGF-KGVEIREEL 392 + E D++ G + + +V K +++ GF G I L Sbjct: 372 VIEEMEKDLKRAKELYQDMIEHGECVSL---KSLAVNGKDLMDQGFESGKNIGVLL 424 >UniRef50_Q0F3A3 TRNA nucleotidyltransferase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3A3_9PROT Length = 468 Score = 313 bits (802), Expect = 8e-84, Method: Composition-based stats. Identities = 142/425 (33%), Positives = 196/425 (46%), Gaps = 39/425 (9%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG-----YQQVGRDFPV--FLHPQTH 55 +LVGG VRD +L + KD D V G T + DA + VG+ F V Q Sbjct: 36 AWLVGGCVRDLMLHINPKDYDLEVYGLTEAALSDALQQLGRCEMVGKQFGVHKLWFRQME 95 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLG 114 + AL RTE KSGSG+ GF + P +T E RRD TINA+ D ++D + G Sbjct: 96 IDVALPRTESKSGSGHRGFVVHTDPHLTPEIATLRRDFTINAMMYDPLQHRLLDLHGGQS 155 Query: 115 DLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 DL +LRHVSPAF EDPLR LR +FAAR+ F +A ET A+ R + + L Sbjct: 156 DLDEGILRHVSPAFAEDPLRPLRAMQFAARFR---FHLAPETAAMCRTLVAEA--DTLPA 210 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 R+W E + R+P L D G L PE+ AL P +WHPE D +HTL Sbjct: 211 SRIWIEWQKWSHARSPSCGLIALHDSGWLACY-PELQALQQCPQDPRWHPEGDVWVHTLQ 269 Query: 235 TLSMAAML--------SPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQ 283 + AA + + + FA LCHDLGK T P+ GH AGV L + Sbjct: 270 VVDQAAEMAKKHHLSRPDREHLLFAALCHDLGKPETTVQQPDGRIGSPGHSKAGVPLTRR 329 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 L QR+ P I + + + H + H F + + +L + +P +E + E Sbjct: 330 LLQRMHAPGAIGKIVVPLVQEH-ITHLFGDPTARAVRRLAWRL----QPAHIELWEMLVE 384 Query: 344 ADVRGRTGFESADYPQGRWLREA-------WEVAQSVPTKAVVEAGFK-GVEIREELTRR 395 AD GR P WL+ A A+ V +++ G + G + E L + Sbjct: 385 ADASGRAPA-PPSRPALPWLQLAQSMQQHRQAAARIVDGDMLMQLGIEPGPVLGEMLAKA 443 Query: 396 RIAAV 400 A + Sbjct: 444 YQAQL 448 >UniRef50_D1AKE0 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AKE0_SEBTE Length = 583 Score = 313 bits (802), Expect = 8e-84, Method: Composition-based stats. Identities = 94/419 (22%), Positives = 168/419 (40%), Gaps = 27/419 (6%) Query: 2 KIYLVGGAVRDALLGLPVKDRDW---VVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEY 58 + Y+VGG+VRD LLG+ KD D+ + + + D +++G+ F + + Y Sbjct: 21 EGYIVGGSVRDILLGVSPKDYDFTTNIAYSTLKELFKDYNPKEIGKHFGILMIKINGIHY 80 Query: 59 ALARTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 +A+ RK G + V + +DLKRRD TINA+A +ID YNG D++ Sbjct: 81 EIAK-FRKDIGILNGRHPESVKFVDEIAEDLKRRDFTINAMAYSRKNGLIDLYNGSSDIK 139 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 N+L+R V ED LR+LR RF + LGF + ET + + + +L+ ++ Sbjct: 140 NKLIRFVGDPGLRIKEDALRILRAVRFVS---ALGFDLETETKKAI--LKNKLQLKKISK 194 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ +E L + ++++ G L ++ PEI+ L+ H + D HT+ Sbjct: 195 ERIREEFSKILLSDYVDKGLLLMKELGILEIIIPEIEMLYEFNQNNPHHHK-DVFAHTVS 253 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 + + R L HD+GK T ++GH ++ +RL+ P Sbjct: 254 VVKNT---QKDLLTRITALFHDIGKPNTHSIDKNGISHYYGHENNSAEIASAALRRLKFP 310 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEA-----DV 346 N+ ++ H +I F K I K + + + + D Sbjct: 311 NDFIRDVDVLIRNHMII--FEKPGAKAIKKFICKVGIENLDKIFDHFYADMSSKKPPVDY 368 Query: 347 RGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKE 405 +S + + ++ + +I + + E Sbjct: 369 SLIDSLKSKVDEIIDKNENIEKQDLEINGNDMLALKIQQKQISKIKNEIYEKVLDGNLE 427 >UniRef50_B1I1S2 Metal dependent phosphohydrolase n=2 Tax=Clostridia RepID=B1I1S2_DESAP Length = 490 Score = 313 bits (802), Expect = 9e-84, Method: Composition-based stats. Identities = 116/439 (26%), Positives = 180/439 (41%), Gaps = 60/439 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ------QVGRDFPVFLHPQTH 55 + Y+VGGAVRD LLG K+ D V + P+E+L + + G F V Sbjct: 19 EAYVVGGAVRDLLLGREPKEFD-VCTDACPREVLTLAAENRIKAFKKGAAFGVISWILDD 77 Query: 56 EEY--ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGL 113 EE A RTE + LEDDL RRD T+NA+A +G I+DP+ G Sbjct: 78 EEIEIATFRTEFYGNDAHRPEKVEFVWA--LEDDLARRDFTVNAIAMRADGSIVDPFEGR 135 Query: 114 GDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 DL+ +LR V FGED LR+ R RF A Y GF +A ET A + H + Sbjct: 136 PDLEAGVLRAVGDPEERFGEDALRMFRACRFVAEY---GFTLAPETKAAIPRALHR--VA 190 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALR--------------VLFPEIDALFGV 216 L+ ERV E L + +++R+ G L + PE+ L GV Sbjct: 191 GLSVERVRDEIYRTLMAEHAAAGLELMRETGLLSADCRGRVNGFDTAVPVLPELARLAGV 250 Query: 217 PAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGL-----TPPELWPRHH 271 ++H D HTL + + + + +R+A L HD+ KGL T P + Sbjct: 251 AQNPEYHQ-FDVWEHTLRVV---SNVPAEPALRWAALLHDVAKGLPEVRGTNRRGLPTDY 306 Query: 272 GHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSI--DAW 329 GH G ++ ++ +RLR P + H P L + +++ S+ D Sbjct: 307 GHARKGAQITGRIMERLRFPPAFARRVTWLVRNHMRF---PELEERFVLRWLKSLAPDFH 363 Query: 330 RKPQRVE---QLALTSEADVRGRTGFESADYPQGRWLREAWE----------VAQSVPTK 376 + + +E + AD+ G A + L E + ++ Sbjct: 364 NRQELLEAVGECLALRRADLLGGKVDSLAVLDGNQRLEEMVKDVMWRVPFFPEDLAITGG 423 Query: 377 AVVEAGFKGVEIREELTRR 395 V +G ++++ + Sbjct: 424 EVAALVGRGPQVKQVMEDL 442 >UniRef50_C8WIX9 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WIX9_EGGLE Length = 465 Score = 311 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 106/419 (25%), Positives = 159/419 (37%), Gaps = 41/419 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT----HE 56 + ++VGG VRDALLG P D D + + Q++ Q R T + Sbjct: 31 FETWIVGGYVRDALLGRPSSDID-IATQAHWQDVQRVFEGQGYRTHETGTAHGTLTVIVD 89 Query: 57 EYALARTERKSGSGYTGFTCY--AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 E AL T +S Y + T+ +DL RRD T+NALA + DPY G Sbjct: 90 EQALEVTTYRSDGAYADARHPNQVSFVRTIAEDLARRDFTMNALAYHPARGLFDPYGGHA 149 Query: 115 DLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL+ +++R V F ED LR+LR RFAA LGF I T M + + G L Sbjct: 150 DLEAQIIRAVGDPDRRFSEDALRMLRACRFAA---ELGFAIDPNTFEGM--LANKGLLPR 204 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++ +R+ E + L + D L + PE+ A+ G +H D H Sbjct: 205 ISTQRITHELQRLLLGEHAGRALTATVD--VLAAVLPELVAMKGFEQRTPYHI-YDVLEH 261 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQLCQRL 288 T L + P VR+A L HD+GK T + +GH V L + RL Sbjct: 262 TARVLD---GVPPYPLVRWAALFHDMGKPAAFFTDEDGTGHFYGHAAISVMLARGIMDRL 318 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 + + + E HD + PK + + + + L D RG Sbjct: 319 ALSSAFAAQVLTLVERHDDVID---RTPKAVKRALSRLGG--NVELFAALCDLKRGDARG 373 Query: 349 RTGFESADYPQGRWLREAWE-----------VAQSVPTKAVVEAGF-KGVEIREELTRR 395 + L ++ + V+E G +G + L+ Sbjct: 374 QAPRCIDRVSDADELERILSEILAADEAFSLKKLAIDGRDVIELGVPQGPLVGLALSDA 432 >UniRef50_A8REM2 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8REM2_9FIRM Length = 447 Score = 310 bits (794), Expect = 7e-83, Method: Composition-based stats. Identities = 99/425 (23%), Positives = 171/425 (40%), Gaps = 39/425 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT-----HE 56 + ++VGG VRDA+ D D V+ + PQE + Q P T E Sbjct: 20 EAFVVGGCVRDAICKRNCHDYD-VITNALPQETIALFQQIGLHILPTGFAHGTLTLIYQE 78 Query: 57 EYALARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 + T RK + ++ +DLKRRD TINA+A +IDP+ G+ D Sbjct: 79 HFIEITTYRKEDDYIDHRRPANISFTKSIYEDLKRRDFTINAIAYHPVHGLIDPFCGIKD 138 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 + R +R V ED LR+LR RF+A+ L F I ++T + +THA +++++ Sbjct: 139 IHRRTIRCVGDPNKRMEEDALRILRALRFSAQ---LSFTIEEKTWQAI--LTHAMDIDYV 193 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER+ E L + P LR L ++ PE+ ++ P P WH D HT Sbjct: 194 SKERIQAEFNQYLCSDKP-NALHFLRAANVLELILPEMQRIYDAPQPTPWHA-YDIFTHT 251 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLR 289 + L+ + ++ + A + HDLGK L + +HGH ++ +Q ++L Sbjct: 252 DIALNHSKGY--NLEKKLAIVFHDLGKPLCESFDEKGIVHYHGHAEISKEIAKQRLKQLH 309 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 N + FHD + K + + +D + + AD + Sbjct: 310 YSNTAIKYITTLIAFHDY---YVCPKRKVLRRFLSKLD--NDIELALDILDIQLADNHAK 364 Query: 350 TGFESADYPQGRWLREAW------------EVAQSVPTKAVVEAGFKGVEIREELTRRRI 397 + + +A +V ++ G++G +I++ L Sbjct: 365 HPKLQKELIENILASKALLLQMQKEQDMIQRKDLAVNGHDIIALGYQGADIKKALEMLYQ 424 Query: 398 AAVAS 402 + Sbjct: 425 TVIDD 429 >UniRef50_A6Q8W0 Polynucleotide adenylyltransferase/metal-dependent phosphohydrolase n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q8W0_SULNB Length = 485 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 133/462 (28%), Positives = 203/462 (43%), Gaps = 66/462 (14%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGST----PQEMLDAG--YQQVGRDFPVFLHPQTHEE- 57 LVGGAVRD ++G VKD D V G T + +L QVG+ F + E Sbjct: 27 LVGGAVRDMVMGQDVKDYDIEVYGLTTLDELESVLSKFGSVSQVGKHFGIVKLRIGDVEY 86 Query: 58 -YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG-EIIDPYNGLGD 115 ++ RTERK+G G+TGF + ++ RRD TINA+ + EI+DP+ GL D Sbjct: 87 DFSFPRTERKTGRGHTGFEVEIDGMLDFKEAAHRRDFTINAIGYNIKTYEILDPFGGLND 146 Query: 116 LQNRLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++ ++LRH+ + F EDPLRV R +FAAR+ GF +A+ T L ++M +G LE L Sbjct: 147 IRYKILRHIDDSTFIEDPLRVYRAIQFAARF---GFDVAENTAVLCKQMVASGVLEELPK 203 Query: 175 ERVWKETESAL-TTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+++E + L P + F ++R+ G F E+ AL VP K+HPE D HT+ Sbjct: 204 ERIYEEWKKLLLKAPKPSMGFGLMREWGITEHCFLELHALIDVPQDTKYHPEGDVWTHTM 263 Query: 234 MTLSMAAMLSPQ---------------------------VDVRFATLCHDLGKGLTP--P 264 +++ A + + + + FA LCHD GK +T Sbjct: 264 LSIDAMASILNKEEKVESRSCRVLSPDSTTDKHRNEKRALKLLFAELCHDFGKPMTTTVE 323 Query: 265 ELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPML--NPKTIVKL 322 E + GH AG++ RL ++ + + E H F I +L Sbjct: 324 EGCIKAIGHEKAGIEPTRSFMYRLTEEHDFIESILPLVEHHLKPSQFYKQGAKASAIRRL 383 Query: 323 FDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD--YPQGRWLREAWEVA--------QS 372 + +E L L ++AD GRT E+ Y G WL E Sbjct: 384 ATKV-------NIEDLVLVAKADFLGRTTPEAKKGVYEAGEWLLGKAEELKVKNRPIEPI 436 Query: 373 VPTKAVVEAGFKG-VEIREELTR---RRIAAVASWKEQRCPK 410 + + ++ G + L ++ V S +E Sbjct: 437 LQGRDLIALGMQPSPRFGTILDEVYGLQLDGVISDREGALDH 478 >UniRef50_B1CAN8 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAN8_9FIRM Length = 439 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 92/424 (21%), Positives = 161/424 (37%), Gaps = 47/424 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ----QVGRDFPVFLHPQTHEE 57 + Y+VGG VRD LLG KD D + ++P+E ++ + G + + Sbjct: 22 EAYIVGGCVRDLLLGKTPKDYD-ITTNASPKETMELFKEYKTIPTGIKYGTVTVIINNTP 80 Query: 58 YALARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 + T RK G ++E+DL RRD TINA+A ++ +ID + G DL Sbjct: 81 IEV-TTFRKEGKYIKNRKPESVEFLSSIEEDLSRRDFTINAMAYNEKSGLIDLFEGRQDL 139 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + ++R V F ED +R+LR RF RY F I + TL ++E + L ++ Sbjct: 140 EKGIIRVVGDGKERFKEDAIRILRAYRFMGRY---DFEIENNTLNAIKE--NMHLLNNVA 194 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E + + + + VLFP I F K+H + + G HT Sbjct: 195 KERILPEIKEIFESD------MDINKMDFITVLFPIIKECFHTYQNNKYHMQ-NVGEHTY 247 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLCQRLRV 290 T + + ++ L HD+GK T E + H ++ + + + Sbjct: 248 KTFNNIENV---FHLKMTMLLHDIGKVKTKTTDAENTDHFYNHSDISREMAKNILDDFKF 304 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 N+ ++ L+ + HD + K + + + + L AD + Sbjct: 305 DNDTKEKILLLIKNHD---KYMAPKNKYVKEKLNEFGE----ELFFDLIKVRIADDEAKN 357 Query: 351 GFESADYPQGRWLREAWEV------------AQSVPTKAVVEAGFKGVEIREELTRRRIA 398 D + E + + ++ GF G ++ E L Sbjct: 358 HELVKDNLKRFRDTEEFAKRVIKNKEPYRISDLKINGDYIISLGFTGKDVGEILKYLLSE 417 Query: 399 AVAS 402 + Sbjct: 418 VIED 421 >UniRef50_A5UUL6 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=2 Tax=Roseiflexus RepID=A5UUL6_ROSS1 Length = 459 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 139/422 (32%), Positives = 187/422 (44%), Gaps = 37/422 (8%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY-----QQVGRDFPVFLHPQTHEEYA 59 LVGGAVRD LLGL D D V G Q + A VGR F V E Sbjct: 29 LVGGAVRDLLLGLTPTDIDIEVYGVDGQTLAAALAPFGRVNVVGRSFGVLKMRLDEYEVD 88 Query: 60 LARTERKSG--SGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 +A R+ TG P +T + L RRD TINALA +G++ID + G DL+ Sbjct: 89 VALPSRRHPLPDEETGALPDYDPSLTPREALARRDFTINALALTPSGDLIDYFGGRADLE 148 Query: 118 NRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R+LRH S AFG+DPLRVLR +FAAR+A R+A ET AL R + L P+R+ Sbjct: 149 ARVLRHTSEAFGDDPLRVLRAMQFAARFA---MRLAPETAALCRTLLSQA--AGLPPDRI 203 Query: 178 WKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 W+E + AL P + L + G L L+PE+ AL G P ++HPE D HTL Sbjct: 204 WREWQKWALLGVFPSAGLRALDESGWLA-LYPELAALQGCPQHPRYHPEGDVWTHTLHVC 262 Query: 237 SMAAMLSP--------QVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLC 285 A ++ ++ + A LCHDLGK T + PR GH AGV L + Sbjct: 263 DAAVRIADRDALDGHERLTLIVAALCHDLGKPPTTVIDDDGIPRSIGHSEAGVSLTQTFL 322 Query: 286 QRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEAD 345 R+ P+ I + H L H P+ + +L + P ++Q EAD Sbjct: 323 VRIGAPHWIERRVTPLVREH-LAHLNVQPTPRVVRRLAHRL----APATLQQWERLVEAD 377 Query: 346 VRGR------TGFESADYPQGRWLREAWEVAQSVPTKAVVEAGF-KGVEIREELTRRRIA 398 GR + A V + ++ AG G + L R A Sbjct: 378 ASGRPPCPPDRPAAAFLAVAEAEGAAMSRPAPLVRGRDLIAAGVAPGPRLGALLRRAYEA 437 Query: 399 AV 400 + Sbjct: 438 QL 439 >UniRef50_D1N4S4 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4S4_9BACT Length = 447 Score = 307 bits (788), Expect = 4e-82, Method: Composition-based stats. Identities = 120/423 (28%), Positives = 167/423 (39%), Gaps = 36/423 (8%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY--QQVGRDFPVFL--HPQTHEEYAL 60 LVGG+VRD LLG D D V + P+E+ + VG F V L E A Sbjct: 34 LVGGSVRDLLLGKVPSDFDL-VTSAKPEELAQLFADFRAVGASFGVSLIGVGGVSLEVAT 92 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQNR 119 AR ER G LE D++RRD TINAL D GE+ D G+ DL+ Sbjct: 93 AREERNYLDGRHPELVR--YTADLECDVQRRDFTINALWYDPAEGEVCDCVGGIDDLERG 150 Query: 120 LLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 ++R V F ED LR+LR RFAAR L F + ET ++ + L ER Sbjct: 151 VVRTVGDAGRRFNEDYLRMLRAVRFAAR---LRFELFPETRRAIQALAPKA--AGLAGER 205 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + E LT +P ++L D G L + PE+ AL GV P ++HPE D HTL+ L Sbjct: 206 INAEVTRMLTGPDPARAVRMLFDTGLLAAVLPEVAALDGVEQPPEFHPEGDVLTHTLLML 265 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 S A ++ ++ L HD+ K + R + H G +L ++ RL + Sbjct: 266 SHMA--CADANLAWSVLLHDISKPEARTVGEDGRARFYAHESMGAELAGKILDRLHFSSA 323 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG-RTGF 352 RD H + + + KL D Sbjct: 324 DRDSITQAVRNHMRFASVRDMRAAKLRKLI-------ADPNFPLELELHRLDCISCHGLM 376 Query: 353 ESADYPQGRWLREAWEVAQS---VPTKAVVEAGFK-GVEIREELT---RRRIAAVASWKE 405 E + R E V + +V AG K G + L ++A S E Sbjct: 377 ECFVFLLDRLAAEPEHRRLPEPWVRGRDLVAAGVKPGPRFKTVLEEVFELQLAGELSTPE 436 Query: 406 QRC 408 + Sbjct: 437 EAL 439 >UniRef50_C7N8U3 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=3 Tax=Leptotrichia RepID=C7N8U3_LEPBD Length = 588 Score = 307 bits (788), Expect = 4e-82, Method: Composition-based stats. Identities = 91/423 (21%), Positives = 171/423 (40%), Gaps = 42/423 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY----QQVGRDFPVFLHPQTHEEYA 59 +LVGGAVRD +L D D+ E+ +++G F + + + Y Sbjct: 23 FLVGGAVRDKILNKDPGDYDF-ATDIEYSELKRIFADYNPKEMGAHFGILMIKVNGKSYE 81 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 +A+ +++G + + T+E+DL RRD TIN+LA ++ I+D Y G D++ + Sbjct: 82 IAKFRKETGVYNSRYPKEIKFVKTIEEDLSRRDFTINSLAYNEETGIVDLYGGKQDIKRK 141 Query: 120 LLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 ++R V ED LR+LR RF ++ LGF + +T + L ++ ER Sbjct: 142 VIRFVGKPKLRIEEDALRILRAFRFISK---LGFNLDKKTAEAI--CNKRKFLTKISKER 196 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 ++ E L + ++ L ++ PE + H + D H + + Sbjct: 197 IFDELSKILMGNFAKKALIEMKKLRVLEMIIPEFRYAYNFDQNNPIHTD-DLFNHIIKVI 255 Query: 237 SMAAMLSPQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 + + RFA L HDLGK + + +GH + E+ + L+ NE Sbjct: 256 HLCDY---DLITRFAALFHDLGKINAKIIDAKGIFHFYGHEKESALIAEEELRMLKASNE 312 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 + + + + H LI + ++ KT+ KL + + + +++L AD+ + Sbjct: 313 TINSVKKIIKNHMLI--YEDVSDKTLKKLIIEM----EDKNLKRLFNLFYADLNSKGIKS 366 Query: 354 SADYPQGRWLREAWEVA--------------QSVPTKAVVEAGFKGVEIREELTRRRIAA 399 + Q L+ W+ + ++ F +I E R Sbjct: 367 KKENEQI--LKNFWDKIENIKKQGKILQFNDLDITGIDLINLKFDNRKIGEVKNRLYDLV 424 Query: 400 VAS 402 + Sbjct: 425 LGD 427 >UniRef50_C0EC94 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EC94_9CLOT Length = 449 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 97/413 (23%), Positives = 158/413 (38%), Gaps = 40/413 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY--QQVGRDFPVFLHPQTHEEYA 59 + Y+VGG VRD LLG D D + + P E + + + Sbjct: 22 EAYIVGGCVRDLLLGWEPDDYD-ITTSALPFETMRCFAGYHIIETGVKHGTVTAVIDGMP 80 Query: 60 LARTERKSGSGYTG--FTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 L T + Y+ +L +DL RRD TINA+A + + D + G DL+ Sbjct: 81 LEITTYRIDGQYSDNRRPDSVTFTRSLREDLARRDFTINAMAYSPSNGLQDYFGGQQDLK 140 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++++R V F ED LR+LR RF++ LGF + T A + +T G L H+ Sbjct: 141 DQMIRCVGDPQTRFEEDALRILRAVRFSS---VLGFGMEPTTAAAL--LTRRGLLVHIAR 195 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ERV E L R+ + + L + PEI G +++H D HT+ Sbjct: 196 ERVQVELNKLLLGRDVGRVLREYTE--VLCEVIPEIIPCIGFEQHSRYHL-YDVWEHTVH 252 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLT--PPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 T+ + ++ VR A L HDL K LT + H L +++ +RLR Sbjct: 253 TVERS---PERLTVRLAMLLHDLAKPLTFSIEGGTGHFYSHQQKSADLAQEILKRLRYSG 309 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 EI + +H + + K I + + + L +D+ G+ Sbjct: 310 EITRRVVNLIRYHSV---EFHGSAKAIKRWLGKLGEEELREL----LLVQRSDLLGKDPS 362 Query: 353 ESADYPQGRWLREAWEVA-----------QSVPTKAVVEAGF-KGVEIREELT 393 + + + +V + E G +G I + L Sbjct: 363 FWYELEELDENEQRINEIIAQNQCFTVAQLAVNGNDLREVGCTQGRLIGQLLE 415 >UniRef50_A4E6N1 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E6N1_9ACTN Length = 464 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 105/432 (24%), Positives = 163/432 (37%), Gaps = 40/432 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQ-----EMLDAGYQQVGRDFPVFLHPQTH 55 ++ + VGG VRDAL+G P D D G + E + G F Sbjct: 27 LEAWYVGGWVRDALMGYPSHDVDMCCSGLWQESKAALEAAGIAVVESGIKFGGITAISDG 86 Query: 56 EEYALARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 E + T R G G +LEDDL RRD T+NA+A ++D Y+G G Sbjct: 87 ERIEV-TTYRLDGFYTDGRHPQSVERAASLEDDLARRDFTVNAMAWHPERGLVDRYDGQG 145 Query: 115 DLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL+ +L+R V F ED LR+LR RFA R L F I ET + E A L+ Sbjct: 146 DLERKLIRAVGDPKRRFNEDALRMLRAVRFACR---LDFMIEPETKRALAEC--APLLDA 200 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 + ERV E E L+T + LR + PE+ A G + +H + H Sbjct: 201 VARERVGIELEGILSTGHGGDAM--LRYPELICASVPELAAGRGFDQRSVYHA-FNVYEH 257 Query: 232 TLMTLSMAAML------SPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVE 282 L++A L +P + +A HD+ K +GH G K Sbjct: 258 IARVLTVAGELALCDGVAPSSSLMWAAFLHDVSKPECFTVDHAGSGHFYGHPELGAKKAR 317 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTS 342 + RL + +++ L+ ++HD +++ + +++L Sbjct: 318 VIMDRLALSHDLVRDVCLLIKYHDKPLRPERSCLLNMMRALSGEGV-DTARLIDELMDLK 376 Query: 343 EADVRGRTGFESADYPQGRWLREAWE-----------VAQSVPTKAVVEAGFK-GVEIRE 390 AD G+ +R ++ ++ AG K G E+ + Sbjct: 377 RADTLGKAPSCFYYVETIEEMRALAHELLKAGEPYTLKMLAINGGDLIRAGVKPGPELGQ 436 Query: 391 ELTRRRIAAVAS 402 L A + Sbjct: 437 LLNSALDAVIED 448 >UniRef50_A9F087 Cca protein n=2 Tax=Myxococcales RepID=A9F087_SORC5 Length = 460 Score = 306 bits (784), Expect = 1e-81, Method: Composition-based stats. Identities = 105/415 (25%), Positives = 158/415 (38%), Gaps = 37/415 (8%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALART 63 ++VGG VRD L G KD D V + P+E++ A + + T Sbjct: 30 WIVGGCVRDLLRGQDAKDWD-VATDARPEEVVAAFRKVIPTGIQHGTVTVLVRGVPYEVT 88 Query: 64 ERK-SGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQNRL 120 + G+ G + DL RRD T+NA+A D +G +IDP+ G DL+ ++ Sbjct: 89 TLRGDGTYSDGRRPDRVEFVDDITADLARRDFTMNAIAIDPVDGHLIDPFGGRSDLEAKI 148 Query: 121 LRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 +R V F ED LRVLR ARFAA L + ET M ++ ERV Sbjct: 149 IRAVGDPGERFAEDGLRVLRAARFAA---TLEGTLDPETERAMGTARSHQTFRCVSAERV 205 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 E A+ R P V F+++R L + PE+ G +WH D H + L Sbjct: 206 RDEWLKAMRARRPSVAFEIMRRTELLAITCPEMIESVGCEQN-RWHA-YDVWGHAMACLD 263 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPP----ELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 P+ +R A L HD+GK T + H G ++ + + RLR N+ Sbjct: 264 ACK---PEPILRVAALMHDIGKPRTREFSEKTKDYTFYEHERVGAEMADPILTRLRFSND 320 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 R + H + + + + + P L AD G+ Sbjct: 321 ERARIVALIRHHLICYD-DTWTDAAVRRWLRRV----TPALAPDLYEIGVADALGKGREA 375 Query: 354 SADYPQGRWLREAWE-----------VAQSVPTKAVV-EAGFKG-VEIREELTRR 395 + D LRE + +V ++ E G + E L R Sbjct: 376 TEDIATIGRLRERVDALLAAGAALSAKDLAVNGNRLMKELGIPPSRLVGELLERL 430 >UniRef50_B0MLX5 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLX5_9FIRM Length = 438 Score = 306 bits (783), Expect = 1e-81, Method: Composition-based stats. Identities = 107/421 (25%), Positives = 167/421 (39%), Gaps = 44/421 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG----YQQVGRDFPVFLHPQTHEE 57 + Y VGG VRD LLG +D D V + P+++++ VG Sbjct: 20 EAYCVGGCVRDYLLGQCPEDYD-VTTSALPEQIIEVFDGYRLLTVGLKHGTVTVIINKHP 78 Query: 58 YALARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 + T R G L DDL RRDLTINA+A +D ++D Y G DL Sbjct: 79 VEI-TTYRIDGEYIDHRHPSKVGFTPNLADDLARRDLTINAIAYNDKVGMVDLYGGAEDL 137 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +N ++R V F ED LR+LR RFA+RY GF I T + L ++ Sbjct: 138 KNGIIRCVGDPMKRFDEDGLRILRALRFASRY---GFSIDKATSDAIH--RQKFLLSFIS 192 Query: 174 PERVWKETESALTTRNPQVFFQVLRDC-GALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ER+ E LT + +LR+ + + PE+ G +K+H + H Sbjct: 193 AERINSELCGILTGD----CYDILRNYSDVICEIIPEMYPCIGFEQHSKYHNKT-VYGHI 247 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTP--PELWPRHHGHGPAGVKLVEQLCQRLRV 290 + T++ A P V+ R L HD+GK + + +GH K+ E++ +RLR Sbjct: 248 VATVAAAE---PTVEARLTMLLHDIGKPDSFFMKDGAGHFYGHADVSCKIAEKILERLRF 304 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 N+I+D + E H ++ + + I + A +R +L D G++ Sbjct: 305 SNKIKDEVLFLIENHGIVINDDIRS---IRRGVARYGA----ERFLKLIKVHYYDTCGKS 357 Query: 351 GFESADYPQGRWLREAWE-----------VAQSVPTKAVVEAGFKGVEIREELTRRRIAA 399 + + + V + GF G EI + L Sbjct: 358 PAYFGEKALFDSIEKHTREFLQNEPPMSLKQLKVNGSDISRLGFTGKEIGKALNFLLEQV 417 Query: 400 V 400 V Sbjct: 418 V 418 >UniRef50_A5EXT8 TRNA nucleotidyltransferase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXT8_DICNV Length = 357 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 163/402 (40%), Positives = 211/402 (52%), Gaps = 45/402 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+ YLVGGAVRD LLGL DRDWVV+G T M G++QVGRDFPVFLHP+T EEYAL Sbjct: 1 MQRYLVGGAVRDRLLGLDGSDRDWVVIGETMDSMRARGFRQVGRDFPVFLHPETGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR ERK G+ GF ++TLE+DL RRDLTINA+A+D+NG++IDPY G D+Q ++ Sbjct: 61 ARIERKIARGHQGFCFDFHQNITLEEDLIRRDLTINAMAEDENGQLIDPYGGSADIQAKI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLRVLR+ RF AR+AHLGF IA ETL L EM +GEL+ LT ERVW+E Sbjct: 121 LRHVSPAFSEDPLRVLRLMRFWARFAHLGFTIAPETLQLCGEMARSGELQTLTAERVWQE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E AL NP+ F L AL VLF G P+ M + Sbjct: 181 CEKALKAPNPECFLMGLAQIHALNVLF-------GATQPSARQL-------AAMNQRLMN 226 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + + R A H L+ L +++ +P + L Sbjct: 227 TPTLEAHQRLARCLW-----------------HEK---DLIAALKKQMPLPQKYHYWLDL 266 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 VA + +L+ + ++ + + + R V LA T D +T +A Sbjct: 267 VARYGELLQNWQHISGEQRWAILKACGGLRAAGDVFALAQTCGVDEALQTQITAAQ---- 322 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 E SV V +AGF G + EL RR+I + Sbjct: 323 -------EKVNSVQANDVQKAGFSGAALGAELKRRQIVLLTD 357 >UniRef50_C6X292 tRNA nucleotidyltransferase n=24 Tax=Bacteroidetes RepID=C6X292_FLAB3 Length = 506 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 109/435 (25%), Positives = 189/435 (43%), Gaps = 51/435 (11%) Query: 3 IYLVGGAVRDALLGL-PVKDRDWVVVGSTPQEMLDAGYQQ-------VGRDFPV--FLHP 52 Y+VGG VRD L+ D D+V GS + V +++ F H Sbjct: 62 AYIVGGYVRDLLMKRGVPSDIDFVTEGSGIDLAQALANEINPRWKVSVFKNYGTAMFKHN 121 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIID 108 E+ AR E + A TLEDD KRRD T+NALA N GE+ID Sbjct: 122 GLDLEFVGARKESYAEDSRNP----AVEAGTLEDDQKRRDFTVNALAISLNKENFGELID 177 Query: 109 PYNGLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 P+ G+ DL+N+++R S + +DPLR+LR RFA+ L F+I + +LA ++ T Sbjct: 178 PFGGISDLKNKIIRTPLEPSQTYSDDPLRMLRAIRFAS---TLRFKIEENSLAAIK--TE 232 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 A ++ ++ ER+ E + + P ++L G ++++ PE+ AL G+ + Sbjct: 233 AERIKIVSRERIMVEFNKIMLSEKPSAGLKILEQTGLMQIILPELTALRGIE-EVEGQTH 291 Query: 226 IDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVE 282 D HTL + + + + +R+A L HD+GK T HGH G K+V+ Sbjct: 292 KDNFWHTLEVVDNISKNTDSLWLRWAALLHDVGKAPTKKFVEGTGWTFHGHEFLGSKMVK 351 Query: 283 QLCQRLRVP-NEIRDLARLVAEFHDLIHTF--PMLNPKTIVKLFDSIDAWRKPQRVEQLA 339 + QRL++P + + + + + +L + + +E L Sbjct: 352 TIFQRLKLPLGPDMKYVQKLVKLSSRPIALIDDGTSDSALRRLL-----FDAGEDLEDLF 406 Query: 340 LTSEADVRGRTGFESADYPQ-----GRWLREAWEVA------QSVPTKAVVEA--GFKGV 386 + ++AD+ + F+ + + ++E E + + ++E G Sbjct: 407 ILNKADITTKNSFKQEKFKRNFETVALKIKEVEEKDQVRNFQPPITGEEIMELFSLKPGR 466 Query: 387 EIREELTRRRIAAVA 401 EI + + A + Sbjct: 467 EIGVLKEKVKEAILE 481 >UniRef50_A6P236 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P236_9BACE Length = 438 Score = 304 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 105/431 (24%), Positives = 163/431 (37%), Gaps = 51/431 (11%) Query: 1 MKIYLVGGAVRDALLG-LPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEE 57 + +LVGGAVRD ++G KD D + + PQ++ Y + + Sbjct: 19 FEAFLVGGAVRDYVMGKRAAKDWD-IATSALPQQVKAVFSGYHLIETGLKHGTVTVVVDH 77 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 + T ++ SG P +L DL+RRD T+NALA + ++D G GD++ Sbjct: 78 QPIEITTYRTDSG--------CPSPSLRADLERRDFTMNALAYNPRTGVVDLVGGAGDIE 129 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++R F ED LR+LR RFA+ Y G I T +R + L + Sbjct: 130 KGIVRCTGDPDRRFREDGLRILRALRFASVY---GMEIDAATADAIR--RNQSLLRGVAV 184 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E L +N G L V PE+ +FG H + D HT+ Sbjct: 185 ERIQVELTGILCGKNAAAVLSDF--AGVLAVTVPELAPMFGFAQHNPHHDK-DVWNHTVA 241 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 + +SPQ +R+A L HD+GK L + GH L + RLR Sbjct: 242 VV---ENVSPQPVLRWAALLHDIGKPLCFSRTEDGVGHFFGHAQKSALLAGDILSRLRFD 298 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 N R+ + +HD+ T K + +L + QL AD G++ Sbjct: 299 NAGRERIVRLVRYHDMPITADR---KLVKRLLSKHGE----ETARQLIELHRADTLGQSD 351 Query: 352 FESA----DYPQGRWLREAWE-------VAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 L E +V ++ G G +I L + Sbjct: 352 ICQYRLGILDEVDAMLEELLREERCFSLKDLAVDGSDMMGLGLTGRDIGRMLQE----CL 407 Query: 401 ASWKEQRCPKP 411 + ++R P Sbjct: 408 NAVLDERIPNE 418 >UniRef50_C3CTV2 Polynucleotide adenylyltransferase/metal-dependent phosphohydrolase n=1 Tax=Bacillus thuringiensis Bt407 RepID=C3CTV2_BACTU Length = 449 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 119/439 (27%), Positives = 189/439 (43%), Gaps = 45/439 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ-----QVGRDFPVFLHPQTHE 56 + + VGG VRD + KD D + G TP+ + Q + G F + Sbjct: 23 RTFYVGGYVRDMFMNKESKDIDVEIYGITPETLRTILSQFGYVDEFGAFFGILKIYGVDI 82 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 ++++ R E K+ G+TGF P + KRRD +NA+ D E+ID +NG+ D Sbjct: 83 DFSMPRKEVKTDDGHTGFDVVVDPFLDTLTASKRRDFRMNAIMVDVLTEEVIDHFNGVSD 142 Query: 116 LQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +Q ++RH+ F ED LR R +FA+R+ F IA+ET+ L + + L Sbjct: 143 IQLGIIRHIDEHTFIEDELRAFRACQFASRF---NFTIAEETIDLCKGFRFS-----LPR 194 Query: 175 ERVWKETESALT-TRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+++E AL + P +FF +R+ ++ LFPE+DAL P +HPE D HT+ Sbjct: 195 ERIFEEFLKALMKSEKPSIFFSYMREMLIVKKLFPELDALIDCPQNPIFHPEGDVWTHTM 254 Query: 234 MTLSMAAML----SPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQ 286 M + A L S + HD+GK +T + GH GV + +Q + Sbjct: 255 MVIDELASLKHLSSNPLAFMLLGPTHDMGKPITTVIQEDGQITARGHAEEGVPVAKQFLK 314 Query: 287 RLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 R+ + + E H ++ + K + KL + +E + L EAD Sbjct: 315 RITNDKRLIKNVLNMVENHMRPNSIAFGSDKAVRKLMVAT-------NIEDIVLFGEADH 367 Query: 347 RGRTGFESADY--PQGRWLREAWEVA----------QSVPTKAVVEAGFK-GVEIREELT 393 +GR E W + E V K +++AG K G E L Sbjct: 368 KGRGISEEKKDYTEVKEWFHQKIEKLQTVGEQSTISPLVSGKDLIDAGLKPGKEFSILLK 427 Query: 394 RRRIAAVAS--WKEQRCPK 410 + + + KE+ K Sbjct: 428 KAFDLQIENGLSKEEILEK 446 >UniRef50_UPI000196A9FA hypothetical protein CATMIT_01143 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196A9FA Length = 460 Score = 304 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 115/401 (28%), Positives = 175/401 (43%), Gaps = 28/401 (6%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVG---STPQEMLDAG--YQQVGRDFPVFLH-PQTHE 56 +YLVGG VRD LL KD D V + +E+L Q +G F V Sbjct: 25 VYLVGGCVRDFLLKRKSKDIDVEVHHLSFAALKEVLSPFGTVQVMGAAFAVVHLSTLEGY 84 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGD 115 E+AL R E K+G + F PD+ LE RRD TIN++ D G +ID Y+G D Sbjct: 85 EFALPRIEEKTGLKHQDFNVIVDPDLPLEKACARRDFTINSMLYDIETGTVIDFYSGQKD 144 Query: 116 LQNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 L+N +LR F EDPLRVLR A F +RY GF++ +T L + + G L+ L+ Sbjct: 145 LKNGILRATNGNHFSEDPLRVLRGASFMSRY---GFKMDPDTKNLCQSIVEEGGLDTLST 201 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER++ E L P LRD L ++D +HPE HT++ Sbjct: 202 ERIYTEYCKILMGLYPSQGLNFLRDIHGLPFYLQDLD---TTHQRTDYHPEGSVWNHTML 258 Query: 235 TLSMAAML----SPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRV 290 +AA+ S + ++ L HD+GK L +GH G L ++ L + Sbjct: 259 VTDLAALCKHHTSEPLWFMWSALLHDIGKPLV-TTPEGHAYGHAEEGAALFDEKVD-LIL 316 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 ++ + + ++H ++ TF + + I K + A + ++ L + D GR Sbjct: 317 SHKQKRYIYTMIQYHMVLPTFSRNHARKI-KFLRFLKAIDQKAPLKDLLYLARCDKLGRG 375 Query: 351 GFESADY-PQGRWLREAW------EVAQSVPTKAVVEAGFK 384 SA ++ E V K ++ GF+ Sbjct: 376 MVTSASINELNAYVEEMISMCGDHAPVPIVTGKDLINEGFE 416 >UniRef50_C7N377 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N377_SLAHD Length = 454 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 139/433 (32%), Positives = 203/433 (46%), Gaps = 38/433 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV-----GRDFPVFLHPQTHE 56 + + VGG VRD LLG KD D V G E+ + G F +F Sbjct: 22 RTFYVGGMVRDRLLGRENKDIDIEVHGIPADELGRILSELGEVTAMGASFGIFGLKHYDV 81 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 + A+ R E +G G+ F + P + E RRD T+NAL +D GE++D + G D Sbjct: 82 DIAMPRKENATGRGHKDFEVFTDPFLGPEKAAMRRDFTMNALMEDVLTGEVLDFFGGQED 141 Query: 116 LQNRLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++ ++RHV+ F EDPLRVLR A+FAAR+ GFR+ADET+AL M +L L+ Sbjct: 142 MRRGVIRHVNDRTFAEDPLRVLRAAQFAARF---GFRVADETVALSSRM----DLSALSS 194 Query: 175 ERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E + L P +FF +R L V FPE+ AL GV +HPE D HT+ Sbjct: 195 ERIVGEMDKAMLKAAKPSIFFNEMRAMDQLDVWFPELKALIGVEQEPAFHPEGDVWNHTM 254 Query: 234 MTLSMAAML----SPQVDVRFATLCHDLGKGLTPP--ELWPRHHGHGPAGVKLVEQLCQR 287 + +AA L S +A+L HDLGK +T + R GH GV + + R Sbjct: 255 RVVDLAAGLRGQASNPRYFMYASLVHDLGKIVTTQVIDGRIRAFGHEYEGVPIAKTFLGR 314 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 L + + A + H + + + + + E L L SEAD Sbjct: 315 LTNESGLIRYATNMMTLHMRPNMLAAQHAGRK----PYMKLFDESVSPEDLLLLSEADFC 370 Query: 348 GRTGFESADYPQGRWLREAWEVAQS------VPTKAVVEAGFK-GVEIREEL---TRRRI 397 GR +S+ Y G L+E + V + +++AGF+ G + E L + RI Sbjct: 371 GR-DVDSSTYTYGAILQENLAFYRDAMAKPFVQGRDLIDAGFEPGPDFGEALELGHKLRI 429 Query: 398 AAVASWKEQRCPK 410 + V+ KE P+ Sbjct: 430 SLVS--KEHALPQ 440 >UniRef50_C4V4H3 Possible tRNA adenylyltransferase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V4H3_9FIRM Length = 421 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 138/407 (33%), Positives = 189/407 (46%), Gaps = 22/407 (5%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHE--E 57 +++ VGG VRD G KD D+V+ G T ++ +++GR FPV+ E Sbjct: 27 RVFRVGGCVRDCFRGAEAKDVDYVLTGITKEKFCALFPCAEKIGRTFPVYHVRINGMCCE 86 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 A AR E K+G GY GF P V++E+DL RRD T+NA+A + G ++DPY G D+ Sbjct: 87 VAFARREVKTGMGYHGFDVEFDPSVSIEEDLYRRDTTMNAMAVELPAGTLLDPYGGRADI 146 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 ++R VSP F EDP+ R R A + A G+R+ ETL M A EL H ER Sbjct: 147 AAGIIRAVSPHFSEDPV---RALRAARQAAEFGYRVEKETLGQMHAC--AEELGHEPSER 201 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + E AL T P VFF+VL L V FPEI AL G P ++HPE D HT+ L Sbjct: 202 LMGELRRALMTPRPSVFFRVLHAAELLTVTFPEIAALVGQTQPTEFHPEGDAYAHTMAML 261 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 + A S + VRF L HDLGKG TP E+ P H+ H G++ + QR+ +P++ + Sbjct: 262 DVVAERSDNIIVRFCALVHDLGKGRTPQEMLPHHYRHEETGLEALASWNQRMTLPHDWKK 321 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 A V H P IV L V + AD + Sbjct: 322 AAAFVIRQHMRAPRLTH--PGKIVDLL--FGIESSGLSVADFNVVIRADHGSLPRY---- 373 Query: 357 YPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASW 403 R ++V + +G EI L IA + Sbjct: 374 ---LRCGEAYLTAMRTVTGRD-APPALRGAEIGAWLRTAHIAILKKL 416 >UniRef50_C9LM50 PolyA polymerase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LM50_9FIRM Length = 500 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 103/416 (24%), Positives = 163/416 (39%), Gaps = 51/416 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV-------GRDFPVFLHPQT 54 + Y VGG VRD LL D D + + P+E++ + GR F + Sbjct: 45 EAYAVGGCVRDLLLAKAPHDWD-ITTSAKPEEIISVMGRNGWKTVDGAGRRFGTVIVVIN 103 Query: 55 HE--EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 H E R E + TL++DL RRD T+NALA +G + D ++G Sbjct: 104 HIAYEVTTFRNEFYGQDSHRPE--NITFSSTLKEDLSRRDFTVNALALGRDGVVYDYFDG 161 Query: 113 LGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 DL+N+ LR V F ED LR+ R RF + L F + M + Sbjct: 162 TKDLENKKLRTVGKAEERFREDALRLFRACRFIGQ---LDFMADKSLVRGMASAF--DRV 216 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRV--------------LFPEIDALFG 215 L+ ERV +E E L + +L G + PE+ L Sbjct: 217 SGLSLERVREEVEKLLVSPFAARGLDLLVRTGLNECSCRIRENGRTEAVRILPELSHLVD 276 Query: 216 VPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT----PPELWPRHH 271 +P K+H + D HTL ++ A P + +R+A L HD+GKG+ + + Sbjct: 277 LPQQKKFH-KFDGWYHTLAVVNAA---PPTLLLRWAALLHDVGKGMPGVRRIKDGKYTDY 332 Query: 272 GHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRK 331 GH G ++ ++ +R R P + E H H F + + K + ++ Sbjct: 333 GHDLKGAEMAAEIFRRWRFPAAFAKRVVWLVENHMRYHYFANVPEANVEKWLRQLARGKQ 392 Query: 332 -------PQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQ--SVPTKAV 378 + + +L AD+ G E+A + + E+ Q V TK + Sbjct: 393 FSSSADMKEGIGELTALCNADIIGCGKDENATEGHSSFGKYMEELCQMMPVSTKDL 448 >UniRef50_Q466Z1 tRNA nucleotidyltransferase n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q466Z1_METBF Length = 404 Score = 301 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 128/401 (31%), Positives = 193/401 (48%), Gaps = 21/401 (5%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEYAL 60 +Y+VGGAVR L+ D D+ V G T D +Q G FPVF+ E+A+ Sbjct: 22 LYIVGGAVRRFLMCQTPHDVDFCVCGLTVDTFKDLFPDARQQGNQFPVFVV--DDCEFAM 79 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNR 119 ARTE+K +GY GF + P VT+E+DL RRDLTIN++A D G I+DP+NG DL N Sbjct: 80 ARTEKKVCAGYNGFEINSDPSVTIEEDLCRRDLTINSIAIDVITGMIVDPFNGAEDLING 139 Query: 120 LLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 ++ S AF EDP+RV+R ARF Y FR + + M ++ H E++ ++ + + Sbjct: 140 IITPTSDAFKEDPVRVIRAARFMCEYPT--FRASPTLIMYMLDLVH--EIKLISDDHKFS 195 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMA 239 E + ++ P +F +L AL + FPEI +L G+P H + D HT+ L Sbjct: 196 ELKKVFSSPKPSRYFNILNLGHALYITFPEIYSLIGIPQ--AHHSDGDAFEHTMRVLDDC 253 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 L+ FA L HDLGK TP E+ P HH H V++++++ VPNE + A+ Sbjct: 254 RELTDDPVCLFAALTHDLGKATTPTEILPAHHDHETRSVEIIDKIDW---VPNEWKYFAK 310 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 + A H H F + V L + I + +E AD Sbjct: 311 VFAADHMRGHRFREMRRGKRVSLLERIHKSNRG--LEGFCKVLYAD-----KPTPGTMRD 363 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 + + S+ + KG + L ++R+ + Sbjct: 364 IALMHATYAKIYSISGDDLPATTPKGEAFGKVLHQKRVEMI 404 >UniRef50_C8W9Z0 Metal dependent phosphohydrolase n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W9Z0_ATOPD Length = 492 Score = 301 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 92/409 (22%), Positives = 153/409 (37%), Gaps = 25/409 (6%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTH----E 56 + ++VGG VRDAL G D D + +T Q+ A + T E Sbjct: 54 FEAWIVGGWVRDALRGSFAHDID-ITTLATWQQSKAAFVAAGIPVHETGIAYGTVTAVVE 112 Query: 57 EYALARTERK-SGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 ++ + T + G G + V+ +E DL RRD TINA+A ++D Y G Sbjct: 113 QHPIEVTTYRCDGEYLDGRRPDSVQFVSCIEKDLARRDFTINAMAYHPKRGLLDLYGGQE 172 Query: 115 DLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL ++R V F ED LR+LR RFA R++ F + ++T + E A L Sbjct: 173 DLSAHVIRSVGEPKARFTEDALRMLRALRFACRFS---FSVEEKTHQALIEC--APLLSQ 227 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 + ER+ E + + ++ L V PE+ L + +H D H Sbjct: 228 VASERIGLEVAQIVEGGHIAHAIKL--GFSVLAVAIPELLLLQNFDQRSPYHA-YDVLKH 284 Query: 232 TLMTLSMAAMLS---PQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLC 285 T S + +R+A L HD+ K + +GH G + + L Sbjct: 285 TARVCSATEAFTVGCATPILRWAALLHDIAKPEMFSVDADGRGHFYGHPEKGADVAKVLL 344 Query: 286 QRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEAD 345 +RL +P + + + HD + + +V L + L +AD Sbjct: 345 KRLALPQRLINEICALVALHDYDVDVTTASLRHMVALLAEVSKSDGITLAYDLLTLKQAD 404 Query: 346 VRGRT-GFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELT 393 + + R A+ + + G +I + L+ Sbjct: 405 ALAKAVPYRGYAVALERMFSLLKNEAKKGIAQRPQDLCISGADIMQALS 453 >UniRef50_A0L904 Polynucleotide adenylyltransferase region n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L904_MAGSM Length = 393 Score = 301 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 151/400 (37%), Positives = 207/400 (51%), Gaps = 31/400 (7%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 +Y VGG+VRD LLG +D+DWVVVG+ P+++ GY++VG DFPVFLHP T EEYALAR Sbjct: 19 LYEVGGSVRDRLLGQRPRDQDWVVVGACPEQLQQLGYKKVGADFPVFLHPYTQEEYALAR 78 Query: 63 TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLR 122 ERK G GY GF A P VTLE DL RRDLTINA+A+ +G++IDPY G+ DLQNR LR Sbjct: 79 RERKQGCGYLGFAVEAPPTVTLEQDLARRDLTINAMARTLDGQLIDPYGGVQDLQNRTLR 138 Query: 123 HVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETE 182 HV+ AF EDPLRVLRVAR AR A +GF + T L R++ GEL H+ PERVW+E++ Sbjct: 139 HVTAAFAEDPLRVLRVARLLARLAPMGFAVDPATERLCRQLVAQGELGHVCPERVWRESQ 198 Query: 183 SALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAML 242 L F Q ++ G P + HP LSMA Sbjct: 199 KGLLEPRGDRFAQFVQQIGV--EFIP----------SQRLHPAACAF----SRLSMACAQ 242 Query: 243 SPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVA 302 V VR DL G G + L +RL +P ++ A + Sbjct: 243 PGDVTVRLVAWLWDL----------LAQAGEEAQGDVWLHALAKRLALPKGLQREAAWLL 292 Query: 303 EFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRW 362 + + + + L + + + R Q + +T F AD G Sbjct: 293 SHLSVGMASVTADVEGLYALLEGLHGGLRQPRTAQFLQLCQ---IEQTLFHGADRLLG-- 347 Query: 363 LREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 +++A ++ QSV +A++ G+KG E+ + L R+ + Sbjct: 348 IKKAMKIWQSVKPQAIMADGYKGAELGQRLKFERLQQLRQ 387 >UniRef50_C5RPI7 tRNA adenylyltransferase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RPI7_CLOCL Length = 454 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 93/420 (22%), Positives = 179/420 (42%), Gaps = 46/420 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV------GRDFPVFLHPQTH 55 + ++VGG VRD++LG+ KD D + + P+E+++ + G Sbjct: 26 EAFIVGGCVRDSILGIKPKDWD-ITTSAEPEEIIELFNSEGCTTVPTGIKHGTITVVIEK 84 Query: 56 EEYALARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 E + + T R G +LE+DLKRRD TINA+A +D ++D +NG Sbjct: 85 EPFEI-TTYRIDGEYKDSRHPSEVKFTKSLEEDLKRRDYTINAMAYNDKVGLVDYFNGQE 143 Query: 115 DLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 D+ +L+R V ED LR+LR RF+A+ LGF+I ET ++ ++ + Sbjct: 144 DIDKKLIRAVGEPKKRLEEDALRMLRAHRFSAQ---LGFKIEKETSEAIKALSV--NIRQ 198 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++ ER+ +E L + N FQ L + G L+ F E+ F +K +I H Sbjct: 199 VSIERIREEFNKILLSNNLVQLFQ-LYENGLLQHFFGELANCFE---RSKKKGDISIYSH 254 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQLCQRL 288 + + + + ++ +R+A L + + + L + P + + +R+ Sbjct: 255 VYL-IELLQSIEKELSLRWAILINYINEFSYNLEDTLVKPNQCKYSTTSQDCASNILKRM 313 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR- 347 + N+ + ++A++ ++I + + I ++ ++ + + L EA ++ Sbjct: 314 KYDNKTIERVLVLAKYQEVIIS----DKVAIKRILNTTGI----ENFKALVEIKEAKIKL 365 Query: 348 -GRTGFESADYPQGRWLREAWEVA----------QSVPTKAVVEAGFK-GVEIREELTRR 395 R E +E+ +V + +++ G K G I E L Sbjct: 366 QSENDINEGMKEIVRIKEEFYEIISSNQCFTIKDLAVKGEDIIKLGVKPGKFIGEILNTL 425 >UniRef50_Q47K87 Metal-dependent phosphohydrolase n=143 Tax=Actinobacteria (class) RepID=Q47K87_THEFY Length = 552 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 103/431 (23%), Positives = 169/431 (39%), Gaps = 51/431 (11%) Query: 5 LVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA------GYQQVGRDFPVFLHPQTHEEY 58 +VGG VRDALLG PV D D + P+ +L+ +G +F + + Sbjct: 107 IVGGPVRDALLGRPVHDIDL-TTDAVPERVLELVDGWADAVWTIGIEFGTVGLRKNGRQV 165 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQ 117 + T R + +L +DL RRD T+NA+A GE +DP+ GL DL Sbjct: 166 EI-TTYRSESYQVKSRKPEVSYGTSLYEDLVRRDFTVNAMAVRVPGGEFVDPFGGLRDLA 224 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +R LR +F +DPLR++R RFAA+ LGF + ++ A M M A L ++ Sbjct: 225 DRTLRTPGKPEDSFNDDPLRIMRGIRFAAQ---LGFSVDEKVAAAMTAM--AERLRIVSA 279 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E + + NP++ ++ D G + PEI L + H D H+L Sbjct: 280 ERIRDELTKLILSPNPRLGVSLMTDLGVANYVLPEIPKLKLT--VDEHHRHKDVYEHSLT 337 Query: 235 TLS------MAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLC 285 L A + P + +R A L HD+GK T P H H G + + Sbjct: 338 VLDQAVDLERARGMEPDLVLRLAALLHDIGKPKTRAFQPGGKVTFHHHEVVGASMSKNRL 397 Query: 286 QRLRVPNEIRDLARLVAEFHDLIHTFPM--LNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 LR P ++ + + H + + + + + +L + + Sbjct: 398 TALRFPKDVVNDVSKLVSLHLRFYGYGKGEWTDSAVRRYARDAGH-----LLSRLHILTR 452 Query: 344 ADVRGRTGFE-----------SADYPQGRWLREAWEVAQSVPTKAVVE-AGFK-GVEIRE 390 AD R + + E ++ + + E G + G + + Sbjct: 453 ADCTTRNRRKAAALARAYDDIERRIERLAKEEELSKIRPDLDGHEIQEVLGIRPGPLVGQ 512 Query: 391 E---LTRRRIA 398 L R+ Sbjct: 513 AWRYLLELRLE 523 >UniRef50_C9KIT0 tRNA nucleotidyltransferase n=3 Tax=Veillonellaceae RepID=C9KIT0_9FIRM Length = 423 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 137/404 (33%), Positives = 192/404 (47%), Gaps = 20/404 (4%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTH--EE 57 ++++VGG VRDAL + D+D++V G + Q+VG FPV+L E Sbjct: 16 RVFIVGGWVRDALRHVRPHDKDYMVSGIAEVDFQQLFPDAQKVGHGFPVYLVSIDGCLSE 75 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 A AR ERK G GY GF P VT+E+DL RRD T+N++A + +IDPY+G D+ Sbjct: 76 VAFARKERKEGQGYRGFRVSYDPSVTVEEDLYRRDTTMNSMALELPAKTLIDPYHGARDV 135 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 + ++R VSP F EDP+ R R A + A GF IA++T M EL+H ER Sbjct: 136 EKGIIRAVSPHFMEDPV---RALRAARQAAEFGFSIAEQTSRYMHAC--REELQHEPQER 190 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + E AL P VFF+ L G L V FPE+ L G P ++HPE D HTL+ + Sbjct: 191 IIAELRRALQAERPSVFFRALERAGILSVTFPELSLLIGKTQPPEYHPEGDAWQHTLLVV 250 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 AA + V RFA L HDLGKG TP + P H+GH G++ + +R+ +P + Sbjct: 251 DGAASKTANVAARFAALVHDLGKGTTPKAMEPHHYGHEQRGLEQLAAWDRRVTLPKDWLR 310 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 R + E H P I L +ID R + EAD + Sbjct: 311 AGRFLIEQHMRAPLLE--RPGKIAALLLAIDKQRSVLTLADFNAVIEADHHSLPDY---- 364 Query: 357 YPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 R + K + +G I + L R+ A + Sbjct: 365 ---LRHGERLLAAMHGISGKDAPKE-LRGRAIGQWLAGRQTARL 404 >UniRef50_B7CE33 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CE33_9FIRM Length = 438 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 99/411 (24%), Positives = 161/411 (39%), Gaps = 39/411 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRD--FPVFLHPQTH-EEY 58 + Y+VGG VRD LL P+ D D + P+ +L+ + VG E Sbjct: 20 EAYVVGGCVRDYLLDRPIHDYDIC-TSAKPEVILNLFDRSVGTGLKHGTVTVLSNSPVEI 78 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 R E + + T+E+DL RRD T+NA+A N +IDPY G DL+ Sbjct: 79 TTFRLESEYKDHRHPDSVKYV--STIEEDLSRRDFTVNAMAYHPNRGLIDPYKGQFDLKA 136 Query: 119 RLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +++R V F ED LR+LR RF A+ LGF + + + T+A +++++ E Sbjct: 137 KVIRCVGNPDRRFNEDALRMLRAYRFCAK---LGFSMDETVKKSI--DTNATLIQYVSIE 191 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E + + T + L L+ +F E+D + +H D HTL Sbjct: 192 RIVHELKEIMETNPQVLASMTL----LLKPVFNELDLALRCSQNSIYHY-TDVLHHTLDA 246 Query: 236 LSMAAMLSPQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 + + + F L HDLGK T H G +L ++LC+R ++ N Sbjct: 247 M--CYLKPYDETLAFVLLFHDLGKIQVKTTDSNGKDHFKHHAKVGSELSKELCRRFKLTN 304 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 E R HD + I K + + + L D + Sbjct: 305 EQRKWIPFYVLHHD---DKFTCDLDCIYK--YRVTYHLDEEHLLNLLQIRYCDAMAHSEL 359 Query: 353 ESADYPQGRWLREAWEV---------AQSVPTKAVVEA-GFKGVEIREELT 393 + + ++ K ++EA +G +I+E L Sbjct: 360 GQKSAKDVELFYDYYIQNRNRCMSISQLALNGKDIIEATNLRGKQIQEALN 410 >UniRef50_B1R1E7 Cca-adding enzyme n=2 Tax=Clostridium butyricum RepID=B1R1E7_CLOBU Length = 438 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 85/415 (20%), Positives = 164/415 (39%), Gaps = 35/415 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYA 59 + Y+VGG VRD L+ D D + + P+ + + + G +Y Sbjct: 24 EGYMVGGCVRDLLINREPNDYD-ITTNAKPEVVARLFDKVILTGLKHGTVTVVINKVQYE 82 Query: 60 LARTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + T R+ G VT +++DL RRD TINA+A + +ID ++GL DL+N Sbjct: 83 V-TTYREDGEYKDSRHPENVKFVTDIKNDLSRRDFTINAMAYNKEKGLIDYFDGLSDLKN 141 Query: 119 RLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +++R V F ED LR+LR RFA + L F+I + + ++ LE ++ E Sbjct: 142 KVIRTVGNPEKRFTEDSLRMLRAVRFAVQ---LDFKIEESIIQSIK--ILNKNLEFISKE 196 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ +E + ++L +C L+ + ++D + K + + H +++ Sbjct: 197 RIREEFNKIILKN--PNGLKLLHECSILKYVADDLDKAYDYYINDKINC-YNLYEHLILS 253 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 + + + +R L HDLGK + + E++ + L+ N Sbjct: 254 ---SCNIKKDLSLRLTMLFHDLGKLKDWNNKLEKVDNIFIESACIAEKILRSLKYDNGTI 310 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 + + + + + +I KL + ID + E L +A + E Sbjct: 311 KKVKTLITYM----HSDLEDKVSIKKLLNIIDV----ELFEDLIKVKKAHIMSENIEEVK 362 Query: 356 DYPQGRWLREAWEV-------AQSVPTKAVVEAGF-KGVEIREELTRRRIAAVAS 402 + + E + + +++ G KG ++ L + Sbjct: 363 FLNIEKLYCDIIEKNECFRIRDMRINGEDIIKIGVKKGKDVGIMLNYLLCKVIED 417 >UniRef50_A0M3Q3 TRNA nucleotidyltransferase n=19 Tax=Bacteroidetes RepID=A0M3Q3_GRAFK Length = 477 Score = 297 bits (760), Expect = 6e-79, Method: Composition-based stats. Identities = 109/414 (26%), Positives = 173/414 (41%), Gaps = 43/414 (10%) Query: 3 IYLVGGAVRDALLGL-PVKDRDWVVVGSTPQEMLDAGYQ-------QVGRDFPVFLHPQT 54 Y++GG VRD +L KD D V VGS + + QV ++F + Sbjct: 30 AYVIGGFVRDHILERGEPKDIDIVAVGSGIELAKKVSEKLPNKPKVQVFKNFGTAMLRSE 89 Query: 55 HEEYAL--ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIID 108 E AR E D TLEDD RRD TINALA N G+++D Sbjct: 90 DMEIEFVGARKESYRKDSRKPIV----EDGTLEDDQNRRDFTINALALKLNKDGFGDLLD 145 Query: 109 PYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 P+NG DL+ ++++ + +DPLR+ R RFA++ L F I E+L ++ + Sbjct: 146 PFNGYDDLKKKIIKTPLDPDITYSDDPLRMYRAIRFASQ---LNFMIEAESLKAIK--AN 200 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 ++ ++ ER+ E + + P F +L G L+ + PE+ AL G+ + Sbjct: 201 NERIKIISKERIVDELNKIMLSDKPSKGFALLYKTGLLKKIIPELTALAGID-EVEGQTH 259 Query: 226 IDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVE 282 D HTL + + + + +R+A L HD+GK T ++ HGH G K+V Sbjct: 260 KDNFWHTLEVVDNISENTDDLWLRWAALLHDIGKAPTKKFHKKIGWTFHGHEFVGAKMVY 319 Query: 283 QLCQRLRVP-NEIRDLARLVAEFHDLIHTF--PMLNPKTIVKLFDSIDAWRKPQRVEQLA 339 +L +RLR+P NE + + + + +L + +E L Sbjct: 320 KLFKRLRLPLNEKMKFVQKMVLMSSRPIAIADDHVTDSAVRRLI-----FDAGDNIEDLM 374 Query: 340 LTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVE---AGFKGVEIRE 390 EAD+ + Y L + Q V + V G EI + Sbjct: 375 TLCEADITTKNPKRFKKYHNNFKL--VRQKIQEVEERDHVRNFQPPVSGEEIMQ 426 >UniRef50_B9CKT6 Cca-adding enzyme n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CKT6_9ACTN Length = 473 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 90/411 (21%), Positives = 150/411 (36%), Gaps = 29/411 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV------GRDFPVFLHPQT 54 + ++VGG VRDALLG D D + + ++ + G Sbjct: 39 FEAWIVGGWVRDALLGSATHDID-ITTSAHWEQTAETYRAAGYVVHETGIKHGTVTVVVN 97 Query: 55 HE--EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 E RTE +++ DL RRD T+NA+A ++DPY+G Sbjct: 98 GHPLEITTYRTEGTYSDHRHPD--EVCFVDSIDKDLARRDFTVNAMAFHPRRGLLDPYHG 155 Query: 113 LGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 DLQ R +R V F ED LRVLR RFA + LGF I +T + A L Sbjct: 156 QYDLQQRCIRAVGDAQSRFEEDALRVLRAIRFACK---LGFSIEKKTADAL--SASASRL 210 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 + ER+ E + + ++ G + PE+ A+ G +++H D Sbjct: 211 AFVAQERIGNEMCAIMDAGVMARALRIGF-AGVAAAV-PELAAMEGFDQQSQYHA-YDVC 267 Query: 230 IHTLMTLSMAAMLS---PQVDVRFATLCHDLGKGLTPPE---LWPRHHGHGPAGVKLVEQ 283 HT + S +R+A L HD+ K T E GH ++ + Sbjct: 268 EHTARVCAGVEAFSAGRASCALRWAALLHDVAKPKTFSEDVSHRGHFFGHPEVSAQMAQT 327 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 + + + +P + A + +HDL + + + + D Q+ + Sbjct: 328 ILESMAIPQSVVRQAIQLIRWHDLEIDKNIPSIRRFIATLDEGWIGGGALLATQIIELKQ 387 Query: 344 ADVRGRTGFESADYPQGRWLREAW-EVAQSVPTKAVVEAGFKGVEIREELT 393 AD + + + + Q + + G +I + L Sbjct: 388 ADALAKAPACREYALELDDISRMVRQEIQKGVAQNPQDLAVSGTDIMQLLH 438 >UniRef50_C4F914 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F914_9ACTN Length = 481 Score = 296 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 111/446 (24%), Positives = 167/446 (37%), Gaps = 51/446 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV-----GRDFP--VFLHPQ 53 ++ ++VGG VRDAL+G P D D GS + + + G F + Sbjct: 39 LEAWIVGGWVRDALMGAPGHDIDICCSGSWEESAAALRSRGIAVVESGVKFGGITAVVDG 98 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNG 112 E R G G T +EDDL RRD T+NA+A ++D Y+G Sbjct: 99 ARIEVTAYRL---DGFYTDGRHPENVQRATCVEDDLARRDFTVNAMAWHPARGLLDCYDG 155 Query: 113 LGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 GDL+ R +R V F ED LR+LR RFA R L F + T + E A L Sbjct: 156 RGDLERRQIRAVGEPRRRFEEDALRMLRAVRFACR---LDFAMDPATAQALAEC--APLL 210 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 + + ERV E E L TR+ + + PE+ + G +H D Sbjct: 211 DQVARERVGIELEGILVTRHGGDALIRYPE--LMCAAIPELARMRGFDQRTPYHA-FDVY 267 Query: 230 IHTLMTLSMAAML------------SPQVDVRFATLCHDLGKGLT---PPELWPRHHGHG 274 HT L++A L P + +A L HD+ K +GH Sbjct: 268 DHTARVLTVAGELSRFRIDGGDPSAPPSPSLMWAALLHDIAKPDCFTVDERGRGHFYGHP 327 Query: 275 PAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR 334 AG KL E++ +RL N++ L+ HD ++ ++ F + Sbjct: 328 EAGAKLAEKIIRRLSCSNDLIRDVSLLIHDHDCPLNPDRISLLRQMQRFARSGV-DTARL 386 Query: 335 VEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQS-----------VPTKAVVEAGF 383 + +L AD G+ + +RE + + ++ G Sbjct: 387 MGELLDLKRADTLGKASGCFYYVEEIERMREMCRELLANREAYSIKTLDLAGSDLIARGM 446 Query: 384 -KGVEIREELTR-RRIAAVASWKEQR 407 G I E L R A V + +R Sbjct: 447 APGPRIGEALNRALEGAIVGAVANER 472 >UniRef50_C8N8W3 Multifunctional CCA protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N8W3_9GAMM Length = 358 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 166/400 (41%), Positives = 224/400 (56%), Gaps = 44/400 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M+I+LVGGAVRDALLGLPV DRDWVVVG+T +EML G++QVG+DFPVFLHPQ+ EEYAL Sbjct: 1 MEIFLVGGAVRDALLGLPVHDRDWVVVGATAEEMLAQGFRQVGKDFPVFLHPQSGEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR ERK+G G+ F AP+V+LE DL RRDLTINA+AQ +G ++DPY G D+Q R+ Sbjct: 61 ARQERKTGRGHQAFAFDFAPEVSLEADLLRRDLTINAMAQAADGRLVDPYGGQADVQARV 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVSPAF EDPLRVLR+ RF AR+A LGF IA ETLAL R M AGEL+HL+ ER+W E Sbjct: 121 LRHVSPAFAEDPLRVLRLMRFYARFAPLGFSIAAETLALCRAMVAAGELQHLSAERIWAE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 E AL + PQ FF L+ GAL VL G A ++ + ++ + +A Sbjct: 181 CEKALASPAPQAFFSGLQAVGALNVL--------GFDASDAQLSAMNARLQAVLAIESSA 232 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 R A G A + L + L +P R +L Sbjct: 233 EH------RLAIWLQ----------------GEDCAAARTA--LQKALPLPKRYRYWLQL 268 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 A++ + I + L+ +T L + + R V LA + DV Sbjct: 269 AADYGNAIRRWHELDGETRWMLLKASGSLRAEGDVLTLAQLMQLDV-----------ALY 317 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 ++ A E +++ + + ++G E+ E + R +I + Sbjct: 318 AEIKNARERVRALSLEELTAQ-YRGAELGEAIRRVQIYKL 356 >UniRef50_C0WDS1 Metal-dependent phosphohydrolase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WDS1_9FIRM Length = 484 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 103/430 (23%), Positives = 158/430 (36%), Gaps = 59/430 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA-------GYQQVGRDFPVF--LH 51 + Y+VGGAVRD L G D D +V + P+E + +G +F V L Sbjct: 21 FEAYVVGGAVRDLLCGKHPHDYD-IVTSARPEETRRLCKGAGLSVVENLGENFGVLVLLV 79 Query: 52 PQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYN 111 E A R E + TLE+DL RRD T+NA+A D G + DPY+ Sbjct: 80 EGRAVEVAAYRKEVYGTDAHRPSGVAYC--QTLEEDLARRDFTVNAMAMDLAGNLTDPYS 137 Query: 112 GLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G DL++ +LR V F ED LR+ R RF A+ LGF L ++ A Sbjct: 138 GQRDLEHHVLRVVGSPSDRFSEDALRMFRACRFVAQ---LGFLPEAGILPAIK--AEAPR 192 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALR--------------VLFPEIDALF 214 + L+ RV E L ++ G + PE+ L Sbjct: 193 AKGLSLSRVKAELHKLLRAPYAGQGMNLMVQSGLAGMSCRIKKEGTYESVPILPELLDLV 252 Query: 215 GVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGL-----TPPELWPR 269 GVP ++HP D H L + + + +A L HD+GKG P+ P Sbjct: 253 GVPQNPRFHP-FDVWGHIWHALDHSDG---SLTLGWAILLHDVGKGRKGVRGIRPDGMPS 308 Query: 270 HHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFD---SI 326 HGH G + E + RL + + + H L + + Sbjct: 309 DHGHDKVGKAMAESILHRLGENGALVNRVAFLVGNHMHFGPARFLPDAALWRWLRKEARS 368 Query: 327 DAWR----KPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAW---------EVAQSV 373 A+R + +L AD+ T + + + + ++ Sbjct: 369 GAFRCTKDLQEAFRELGTLCLADMAATTASAESQALARHFADQLFLMAGTMPVHTADLAI 428 Query: 374 PTKAVVEAGF 383 + ++ AG Sbjct: 429 SGRDLIAAGI 438 >UniRef50_D2RM72 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RM72_ACIFE Length = 481 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 116/459 (25%), Positives = 173/459 (37%), Gaps = 62/459 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV-------GRDFPVFL--H 51 + ++VGGAVRD LLG D D VV + P+E++ G++F V + Sbjct: 21 FQAHVVGGAVRDMLLGRTPDDYD-VVTNARPEEIIRTAEDAGIPVVSELGQNFGVVILRV 79 Query: 52 PQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYN 111 + E A R E GSG TLE+DL RRD TINALA D G I D ++ Sbjct: 80 ERHGVEVAAYRNETY-GSGDAHRPSEVWYCKTLEEDLSRRDFTINALAVDQEGHITDCFH 138 Query: 112 GLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 GL DL+ R+LR V F ED LR+ R RF + LGF L + Sbjct: 139 GLDDLRGRVLRTVGDPDRRFSEDALRMFRACRFVGQ---LGFAPDPAILPAIGRNLQK-- 193 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALR--------------VLFPEIDALF 214 + L+ ERV E L ++ G + PE+ L Sbjct: 194 VPGLSLERVRTELNKLLMGTYAGEGMDLMVKSGLAAESCRVRRKGQYETVPILPELTHLV 253 Query: 215 GVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGL-----TPPELWPR 269 G+ ++HP D HT + L ++V + L HD+ KGL E P Sbjct: 254 GLGQNPQFHP-YDVWKHTAVALDKGDR---SLEVGWGILLHDVAKGLEGVRGINREGQPC 309 Query: 270 HHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFD---SI 326 HGH G L Q+ +RL++P E+ D + + H Sbjct: 310 DHGHEAVGAALARQILERLQLPREVVDRVAWLVKNHMHFGFISAQEDSKTWHWLRKEARS 369 Query: 327 DAWR----KPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSV--------- 373 +R + +QL ADV ++ + + ++A + Sbjct: 370 GHFRLNKEMAEAFKQLTAVCVADVAATNAAQNDVIHAQMYGKRLVKMAYLMPVHTSDLDF 429 Query: 374 PTKAVVEAGFKGVEIRE----ELTRRRIAAVASWKEQRC 408 K + G +++E L R + + + EQ Sbjct: 430 SGKDALTLGAAPAQLKELMPVLLRRVQDRMLENDPEQLA 468 >UniRef50_C9L4X1 tRNA nucleotidyltransferase/poly(A) polymerase family protein n=2 Tax=Clostridiales RepID=C9L4X1_RUMHA Length = 415 Score = 292 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 155/410 (37%), Gaps = 61/410 (14%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHEEY 58 Y VGG VRD+LL D D + + P E+ + + V L + E Sbjct: 23 AYAVGGCVRDSLLFRSPADWD-ITTSAKPLEVKEIFKRTVDTGLQHGTVTVLIEKEGFEV 81 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 R + + LE+DLKRRD TINA+A +D ++D + G DLQ+ Sbjct: 82 TTYRIDGEYEDSRHPK--EVIFTGNLEEDLKRRDFTINAMAYNDAVGLVDVFGGRQDLQD 139 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +++R V F ED LR+LR RF+A+ LGF I ++T + A L++++ E Sbjct: 140 KIVRCVGNPQERFTEDALRILRAVRFSAQ---LGFSIEEKTKEAAK--VLAPTLKNISAE 194 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E L ++NP + + + G +++ PE D L E G TL Sbjct: 195 RIQTELLKLLVSKNPH-YLKTAWELGITKIVLPEFDVLM----------ETSMGEKTLKA 243 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 A S R A L ++ K L +++ +RLR N+ Sbjct: 244 F---AYTSADKAERLAVLFANMEKT-------------PEKSRDLAKKILRRLRFDNDTI 287 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 + + +H K + + P L A++ + Sbjct: 288 NKVSELVFWHTCP---WECTKKAVRIVLSQC----TPALFPVLLNVHRAELLAEEKPDKE 340 Query: 356 DYPQGRWLREAWE-----------VAQSVPTKAVVEAGFK-GVEIREELT 393 + E + +V K +E G + G +I E L+ Sbjct: 341 NLEFLEKSGEFYREIMEKKECISIKMLAVSGKDFIEMGIEPGKKIGELLS 390 >UniRef50_C7LRX4 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRX4_DESBD Length = 459 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 115/429 (26%), Positives = 178/429 (41%), Gaps = 40/429 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY--------QQVGRDFPVFLHP- 52 K + VGG VRD G KD D V G + + + G+ F V Sbjct: 18 KAFFVGGCVRDKFFGYDSKDIDIEVYGHDFDAICEVVKGIPVVQDVFECGKSFNVVKVRL 77 Query: 53 --QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPY 110 + A+ R E +G G+ + P ++ E+ RRD ++NAL + +GEIID + Sbjct: 78 ICGADLDIAVPRREVSTGGGHKDYVILPDPSMSPEEASARRDFSMNALMETFDGEIIDFH 137 Query: 111 NGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 NG+ DL+ + LR + +F +DPLRVLR +FA R+ G R+ + T L +G + Sbjct: 138 NGVQDLKTQRLRAIGNSFLDDPLRVLRGMQFAGRF---GLRVEEHTAYLC--ALISGRVL 192 Query: 171 HLTPERVWKETESAL-TTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 ++ ER+W E E L + P Q L D GA+ VL+PE+ AL G+ HPE Sbjct: 193 AMSKERIWGEWEKLLSKSDKPSFGIQFLEDTGAI-VLYPELSALDGLRQDPTHHPEGCVL 251 Query: 230 IHTLMTLSMAAML--------SPQVDVRFATLCHDLGKGLTPP--ELWPRHHGHGPAGVK 279 HT M L A + +V + A +CHD GK LT + HGH AG + Sbjct: 252 THTKMVLDEGARIALKENLEHQSRVILLLACICHDFGKALTTTMVDGRISCHGHAEAGSE 311 Query: 280 LVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLA 339 + + P +R+ + + H + + K + KL + I+ ++ L Sbjct: 312 MTAAFLDSIGAPAALREPVSQLCQHHMDLI-SGDVTAKQVRKLANKINRSSSLGLLKHLI 370 Query: 340 LTSEADVRGRTGFESADYPQGRWLREAW-------EVAQSVPTKAVVEAGFK-GVEIREE 391 + AD GR + A + + +V G K G Sbjct: 371 V---ADNLGRGSASRYPAVVDEMMELAKAEDVTNTAPKPLLQGRDLVRMGLKQGPMFGRI 427 Query: 392 LTRRRIAAV 400 L + Sbjct: 428 LNDVYEKQL 436 >UniRef50_A5FA68 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=15 Tax=cellular organisms RepID=A5FA68_FLAJ1 Length = 495 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 107/414 (25%), Positives = 174/414 (42%), Gaps = 43/414 (10%) Query: 4 YLVGGAVRDALLGLPVK-DRDWVVVGSTPQEMLDAG-------YQQVGRDFPVFLHPQTH 55 Y++GG VRD LL K D D V VGS + L QV + + + Sbjct: 49 YVIGGFVRDLLLNRGSKKDIDVVAVGSGIELALKVSDLLPNKPKVQVFKTYGTAMLRFED 108 Query: 56 EEYAL--ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDP 109 + AR E + + TL+DD RRD TINALA N G+++DP Sbjct: 109 TDIEFVGARKESYTRDSRNPIV----ENGTLQDDQNRRDFTINALALSLNSTNFGDLLDP 164 Query: 110 YNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 ++GL DL+N+ ++ + +DPLR+LR RFA + L F I + +L + + +A Sbjct: 165 FDGLTDLENKTIKTPLDPDITYSDDPLRMLRAIRFATQ---LNFEIEENSLNAITK--NA 219 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 ++ ++ ER+ E L+T P F +L G L ++ PE+ AL V + H Sbjct: 220 DRIKIISGERIVDELNKILSTPKPSSGFLLLYKTGLLDLILPELTALNQVE-EIEGHTHK 278 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQ 283 + HTL + + V +R++ L HD+GK T + HGH G K+ ++ Sbjct: 279 NNFYHTLEVVDNICPNTDDVWLRWSALLHDIGKAPTKRFTKKQGWTFHGHEFLGGKMAKK 338 Query: 284 LCQRLRVP-NEIRDLARLVAEFHDLIHTFPM--LNPKTIVKLFDSIDAWRKPQRVEQLAL 340 + +RL +P N + + + + +L + + VE L Sbjct: 339 IFERLHMPLNHKMKFVQKMVIMSSRPIVLAQDIVTDSAVRRLV-----FDAGEDVENLMT 393 Query: 341 TSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVE---AGFKGVEIREE 391 EAD+ + + Y + + + V + V G EI E Sbjct: 394 LCEADITTKNPSKFKKYHKNFEI--VRKKIVEVEERDHVRNFQPPISGEEIMEI 445 >UniRef50_C5ZY12 tRNA nucleotidyl transferase n=3 Tax=Helicobacter RepID=C5ZY12_9HELI Length = 417 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 136/409 (33%), Positives = 214/409 (52%), Gaps = 21/409 (5%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 KIYLVGGA+RD LLGLP KD+D+V VG + + YQ+VG++FPVFL +H + ALA Sbjct: 9 KIYLVGGAIRDYLLGLPTKDKDYVAVGFSENDFQR--YQKVGKNFPVFLID-SHTQIALA 65 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN-GEIIDPYNGLGDLQNRL 120 R E K+ GY GF+ +VTL +DLKRRDL+INA+A D N +IDP+NG DLQN++ Sbjct: 66 RKETKTTKGYNGFSYKTD-NVTLLEDLKRRDLSINAMALDLNSNTLIDPFNGKKDLQNKI 124 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH SPAF EDPLR+LR+ARF A+ + ++I T L+ M EL+ L P RV++E Sbjct: 125 LRHTSPAFCEDPLRILRLARFKAKLG-IHWKIHPSTKVLVHSM--KEELKTLEPNRVFEE 181 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 + L+ +N +FF+ L + G L+ +FP I AL + H E +HT+ L Sbjct: 182 IKQVLSQKNSHLFFETLFELGVLKEIFPSIYALTILKEYNPNHLESSVFVHTMEVLKRLD 241 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPE-LWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 + + ++ L H++ K T P + + L++ +++P I+ Sbjct: 242 --NDSLLLKLTALYHNIAKPYTYRNSKNPNEYDNPKKVESLID-----MQIPKTIQKKML 294 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 ++ H I ++P I+ F S + EAD + + Sbjct: 295 ILIGNHIKITHLFAMHPSKILDFFHSFKG--DKTLLLDQIRFFEADYKRCISQAQYTTLE 352 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFK---GVEIREELTRRRIAAVASWKE 405 + + E + S K +++ G +I++ + + +I ++S+ Sbjct: 353 SKKIIELFSQINSYSPKEWIQSQKSKPNGNQIKDHIQKAKINLISSFLS 401 >UniRef50_B0AC07 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AC07_9CLOT Length = 450 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 126/433 (29%), Positives = 204/433 (47%), Gaps = 39/433 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY-----QQVGRDFPVFLHPQTHE 56 + + VGG VRD +LG+ +KD D V ++++ Q++G F VF Sbjct: 22 RTFFVGGCVRDEILGIDIKDVDIEVHNIEVEDLVKILESIGDVQKIGSFFGVFNLKGYDI 81 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGD 115 + A+ R E+ +G G+ F + P + ++ RRD TIN+L +D +GEIID +NG+ D Sbjct: 82 DIAMPRKEKSNGRGHKDFEIFVDPFIGYKEAALRRDFTINSLMKDVLSGEIIDSFNGIED 141 Query: 116 LQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 L N+++RHV+ +F EDPLRV R ++FA+R+ F I ++T L M ++ L Sbjct: 142 LNNKIIRHVNDESFCEDPLRVFRGSQFASRF---DFEIYEKTKLLSSTM----DVSSLAF 194 Query: 175 ERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERV+ E + L P +FF+ L+D L F E++ L G+ HPE D HT+ Sbjct: 195 ERVFDELKKALLKANKPSIFFKSLKDMNQLSYWFKEVEDLIGINQSEIHHPEGDVFTHTM 254 Query: 234 MTLSMAAMLSP----QVDVRFATLCHDLGKGLTPP--ELWPRHHGHGPAGVKLVEQLCQR 287 M L AA L ++ A LCHD GK +T + +GH V L + L R Sbjct: 255 MVLDEAAKLRDKAKNKLAFMLAALCHDFGKTVTTEIKKGKLTAYGHEVESVTLAKGLLDR 314 Query: 288 LRVPNEIRDLARLVAEFHDLIHT-FPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 L ++ + + H + + K+++KL W L L ++AD Sbjct: 315 LTNKISLKKETLNLIKLHMKPNQMYNSAKKKSMMKL------WDDAIHPSDLILLAKADA 368 Query: 347 RGRTGFESADYPQG---RWLREAWEVA--QSVPTKAVVEAGFK-GVEIREEL---TRRRI 397 GR + + + L E E+ V K ++E G K GV E + + + Sbjct: 369 LGRGVKKDYSEIESILNKSLNEYKELMLEPEVVGKDLIELGLKPGVLFSEYIKLGHKLHL 428 Query: 398 AAVASWKEQRCPK 410 + ++ K++ Sbjct: 429 SGLS--KDEILKH 439 >UniRef50_A6GQU7 Polynucleotide adenylyltransferase region:Metal-dependent phosphohydrolase, HD subdomain n=1 Tax=Limnobacter sp. MED105 RepID=A6GQU7_9BURK Length = 393 Score = 289 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 146/408 (35%), Positives = 205/408 (50%), Gaps = 46/408 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 K+Y+VGGAVRDAL+G DRDWVVVG+T ML AG+ VG DFPVFLHP+THEEYALA Sbjct: 27 KVYVVGGAVRDALMGRASSDRDWVVVGATVDHMLAAGFTPVGSDFPVFLHPRTHEEYALA 86 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 RTERKSG GY GFT +A P VTLE+DL RRD T+NA+A + G +IDP+ GL DL+N+ + Sbjct: 87 RTERKSGHGYKGFTFHAEPSVTLEEDLARRDFTVNAMAMNAEGGLIDPFQGLADLENKCM 146 Query: 122 RHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKET 181 RHVSPAF EDPLRVLR+ARF AR+ L F +A+ET+ L RE+ +GEL+HL PERV+ E Sbjct: 147 RHVSPAFSEDPLRVLRLARFLARF--LDFSVAEETMDLCRELQASGELKHLVPERVYAEL 204 Query: 182 ESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAM 241 + P +++ E+ VP + PE D L+ + Sbjct: 205 TKGMGEEKPSRMIKLISKLNGW----GELAPACSVPFSSFDKPEYD-------CLNSLSG 253 Query: 242 LSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLV 301 + + H ++ L + R+P + ++ Sbjct: 254 AEARWVYSL---------------GFFLSLAH-------IKALAKAWRLP-RTIEDLSVL 290 Query: 302 AEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGR 361 A +P + + F +D +RKP R+ Q+ A + G + Sbjct: 291 ACHCLAFVQQQSTDPDSFARFFGQVDLYRKPARLRQVNQLV-AQIHGEGRVHAFVEQAVA 349 Query: 362 WLREAWEVA---QSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 L + A + + G ++ + R+A V + Sbjct: 350 ELEQGHYKAFLGDKIVNHPL------GEQVAQVAANARLAWVEELHSK 391 >UniRef50_D1BP90 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=3 Tax=Veillonella RepID=D1BP90_VEIPT Length = 472 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 110/437 (25%), Positives = 163/437 (37%), Gaps = 59/437 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ-------VGRDFPVF--LHP 52 + Y++GGAVRD L+ D D +V + P +++ VG+ F V Sbjct: 18 EAYIIGGAVRDILMHQKPHDFD-IVTSARPDTVIEVLRSHDIQTTDLVGKSFGVVVATLE 76 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNG 112 E A RTER + A TLE+D+ RRD T+N +A + GE+ID G Sbjct: 77 GKQYEIATYRTERYGADSHRPEEITYA--DTLEEDVLRRDFTVNGMAMNRYGEVIDLVGG 134 Query: 113 LGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 D++++ LR + F ED LR+ R RF A+ L F + E L M + H + Sbjct: 135 RRDIKHKTLRTIGNAQERFEEDALRLFRACRFVAK---LDFLPSKELLEAMPKAFHR--V 189 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALR--------------VLFPEIDALFG 215 L+ ERV E + VL + PE+ L Sbjct: 190 PGLSLERVRSEINRLMLEPAVAKGLDVLVQSRLAECSCRVVENGVAREVPILPELYHLVN 249 Query: 216 VPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPE----LWPRHH 271 +P +H E D HTL +S P + +R+ L HD+ KG+ Sbjct: 250 LPQEKDFH-EFDGWYHTLAVVSHTE---PDLVLRWGALLHDVAKGMPAVRAVINGRLTDR 305 Query: 272 GHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFD---SIDA 328 GH G ++ E L RL P + + H H F K Sbjct: 306 GHDTLGAEMTETLLTRLGYPKAFVQRVAWIVKNHMRFHYFVQNGDANEKKWLRKEARSGE 365 Query: 329 WRKPQRV----EQLALTSEADVRGRTGFESADYPQGRWLREA--WEVAQSVPTKAV---- 378 +R Q + EQLA ADV G S+ + + V TK + Sbjct: 366 FRDSQIMRTAWEQLAKVCAADVLGCGKPYSSTDGTLAFGECMADLSLEMPVHTKDLNYDE 425 Query: 379 --VEAGFKGVEIREELT 393 ++ G ++ E L Sbjct: 426 RVIK--LAGKQVGEGLQ 440 >UniRef50_UPI0000E87B3C tRNA nucleotidyl transferase, putative n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87B3C Length = 378 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 150/406 (36%), Positives = 227/406 (55%), Gaps = 30/406 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIYLVGGAVRD+LL +P KD+D++VVG+TP+ M++ G++ +G+DFPVFLHP+++EEYAL Sbjct: 1 MKIYLVGGAVRDSLLNIPFKDKDYLVVGATPEIMVNLGFKPIGKDFPVFLHPKSNEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE+K +G+ GF YA+PDV++E+DLKRRD+TINA+AQD G IDPY+G+ D+ ++ Sbjct: 61 ARTEKKIAAGHKGFNFYASPDVSIEEDLKRRDITINAIAQDSEGNYIDPYDGISDIGKKI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 +RHVSP+F EDPLRVLRVARF A+ F I DET+ LM+ M GE+E L+ ERV E Sbjct: 121 IRHVSPSFQEDPLRVLRVARFKAKLPS--FVIYDETMMLMKRMVADGEVECLSSERVTAE 178 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 L ++ +VL +C AL ++FP+I + + + L L+ A Sbjct: 179 LMKGLDQKDAFSMLEVLDECAALPIIFPDIS-----------FKKHNRAVKKLFDLANEA 227 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 +S + L + L P +E + +++ EI + L Sbjct: 228 QVSNSKRLLLFLLAVNFEDNLINPT---------------IEVNTRIIKLTAEINKIIVL 272 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + ++ D + F LN ++ + L D +R+P RV + ++GR Sbjct: 273 LQKYSDKLINFFTLNVESQLDLLGVFDFFRRPHRVIECIDLISLVLQGRDLSNVLLLEGR 332 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 + E A + K V+ G I+ L R R+ ++ K + Sbjct: 333 SLILEY--QADLLHNKITVDKDQSGENIKRALYRERLNTLSKLKNR 376 >UniRef50_A6CGS1 Metal dependent phosphohydrolase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CGS1_9PLAN Length = 422 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 93/417 (22%), Positives = 156/417 (37%), Gaps = 47/417 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ----QVGRDFPVFLHPQTHE 56 + GG VRD LL KD D V + P+E+ + VG F V + Sbjct: 22 FQALWAGGCVRDLLLQKEPKDYD-VATNALPEEVRTLFGKRRTLAVGASFGVIIVRGHQP 80 Query: 57 EYALAR-TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLG 114 + + T R G G T E+D +RRD TIN + D N + D G Sbjct: 81 DCDVEIATFRSEGPYLDGRRPEHVKFTTAEEDAQRRDFTINGMFYDPINDSLFDYVGGKA 140 Query: 115 DLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL ++R + ED LR+LR RFAA L F++ + T ++ M A ++ Sbjct: 141 DLNQHIIRAIGNPLERMQEDKLRLLRAIRFAA---TLHFQLEESTRQAVQTM--ADQINV 195 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++PER+ E L ++++ G L+ + PE+ L+ + Sbjct: 196 VSPERIADELRKMLIHPARSQAIALVQETGLLKQVLPELAPLWESAGN------RSLWLQ 249 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 TL L + + + + FATL DL + + ++C+RLR Sbjct: 250 TLDRLKLVS--THSFETAFATLLLDLPASGADQR------------LDEIYEICKRLRFS 295 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 N +L + + + P + + +L D QL AD+ R Sbjct: 296 NHSLNLVHWLVQQRHSLEHAPAMKLSRLKRLLAHEDC-------PQLFELIAADLSSRKQ 348 Query: 352 FESADYPQGRW----LREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVASW 403 ++ RE + +++ G K G + + LT+ + A + Sbjct: 349 PLDDLEFCRQYRDHTPREVLNPPPLISGNDLIDLGIKSGPQFKHLLTQVQDAQLEEL 405 >UniRef50_Q3EZB5 TRNA nucleotidyltransferase n=2 Tax=Bacillus thuringiensis RepID=Q3EZB5_BACTI Length = 510 Score = 287 bits (734), Expect = 7e-76, Method: Composition-based stats. Identities = 135/376 (35%), Positives = 183/376 (48%), Gaps = 34/376 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHE--E 57 K+YLVGGAVRD LL + KD+D+ V G + + G+DFPV+ E E Sbjct: 19 KVYLVGGAVRDLLLDIVPKDKDYCVTGISQEGFESLFPTAMLQGKDFPVYRMDIDGELCE 78 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDL 116 ALAR ERK G+ GF YA+PD+T+EDDL RRD+TIN++A D ++IDP+ G DL Sbjct: 79 VALARKERKVSEGHNGFVIYASPDITIEDDLARRDITINSMAIDLETNKLIDPFYGELDL 138 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 + +R + AF EDPLRV R ARFAA Y GF I +T +M ++ EL L ER Sbjct: 139 RTETIRATTEAFCEDPLRVYRAARFAAEY---GFFIEYKTSTMMNQL--KSELLSLPIER 193 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 V +ET+ A R P FF L+ L V FPEID L + +HPE + HT+ + Sbjct: 194 VLEETKKAFMARTPSRFFHALKSANVLDVHFPEIDCLSELEQNLMYHPEGNVFEHTMQVI 253 Query: 237 SMAAMLSPQVD------VRFATLCHDLGKGLT----PPELWPRHHGHGPAGVKLVEQLCQ 286 A L+ ++ V F+ L HD+GK +T P + P + H GV + EQ Sbjct: 254 DSARYLADELPVNSELVVMFSALLHDVGKYVTKGIHPVKGTPTYIAHEAEGVPIAEQFLD 313 Query: 287 RLRVPNEIRDLARLVAEFHDLIHT-FPMLNPKTIVKLFD------SIDAWRKPQRVE--- 336 R + + H + H F + V + D RKP + Sbjct: 314 RFNL-KSYKKAILFNVANHMVFHDAFTAMKNGKAVDFMEGKFEYSGSDYIRKPGLLPSVG 372 Query: 337 ---QLALTSEADVRGR 349 AD GR Sbjct: 373 WAQDYITVCIADTVGR 388 >UniRef50_C6JPJ4 Poly(A) polymerase n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JPJ4_FUSVA Length = 448 Score = 286 bits (733), Expect = 8e-76, Method: Composition-based stats. Identities = 97/417 (23%), Positives = 159/417 (38%), Gaps = 31/417 (7%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY----QQVGRDFPVFLHPQTHEE 57 + Y+VGG VRD+LLGL KD D+ V + +++L+ +++G+ F + Sbjct: 25 EGYIVGGYVRDSLLGLKPKDCDF-VTNLSYEKLLEIFKEFHPKEIGKAFGIIQIKYKGIH 83 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDL 116 Y +A+ + G + +DLKRRD TINA+A D +N ++ + D+ Sbjct: 84 YEIAKYRKDIGVPEDRREQEVEFTDNIMEDLKRRDFTINAVAFDGENYRYVEH--AVEDI 141 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 N+ LR V EDPLRV+R RF + L + ++ L+ Sbjct: 142 MNKNLRFVGGAPERIKEDPLRVMRFIRFLVTKNLNNKNDIKQILPYI------PLVKKLS 195 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E +T + ++L G L L PE H + H Sbjct: 196 MERMRDEFSKIITADDAHSAIELLEKTGILEYLIPEWTKTKKFNQRNPHH-NLTLDEHIK 254 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTP--PELWPRHHGHGPAGVKLVEQLCQRLRVP 291 + A + +++R A L HD+GK T +GH L E++ R++ Sbjct: 255 KVV---ASIEGDIELRLAALLHDIGKPQTYTLKNGIGHFYGHEQESAVLAEKILLRMKYA 311 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEA-----DV 346 N+I L+ H ++ N K KL + I P+ + + A D Sbjct: 312 NKIVKNVTLLIANH--LNNSKNSNKKYCKKLIEKIGYENMPKLFKLMEADRIAHKPPFDF 369 Query: 347 RGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGF-KGVEIREELTRRRIAAVAS 402 + A Y V ++ G KG +I E L + Sbjct: 370 TALDKLKIAYYEICNNNEPISIKDLVVNGNDMIALGITKGKDIGETLKYLLGKVLED 426 >UniRef50_C6NV27 tRNA nucleotidyltransferase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NV27_9GAMM Length = 407 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 152/414 (36%), Positives = 207/414 (50%), Gaps = 33/414 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM---LDAGYQQVGRDFPVFLHPQTHEE 57 MK YLVGGAVRD L G+ V+DRD+V+VG+ +++ L G++ G+DFPV L + EE Sbjct: 1 MKRYLVGGAVRDRLRGVTVQDRDYVLVGAGQEDIDALLARGFRWAGKDFPV-LIGREGEE 59 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDL 116 YALARTERK+GSG+ GF A V+LEDDL RRDLTINA+A+D G I+DPY G DL Sbjct: 60 YALARTERKTGSGHRGFVVATA-GVSLEDDLLRRDLTINAMAEDLETGAIVDPYGGRRDL 118 Query: 117 QNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 R+LRHVSPAF EDPLRVLR+ARFAAR F IA ET AL+R+M AGEL L+P+R Sbjct: 119 DARVLRHVSPAFREDPLRVLRLARFAARLP--DFVIAPETEALVRQMIAAGELAELSPDR 176 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 VWKETE AL +F +L L VLFPE+ L P L L Sbjct: 177 VWKETEKALKGPAASRYFSLLWYWSGLAVLFPELLPLAQSGLP---------WQRGLAAL 227 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 Q + +A C+ P + AG + + +RL +P + Sbjct: 228 DHCLHRYGQPALAWAAFCY------------PMSSRYPAAGEGALMAMGRRLPIPKSWQR 275 Query: 297 LARLVAEFHD-LIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 L L+ +P+ ++L + A R + + +A E Sbjct: 276 LTLAAVTGRTQLLPALRQASPRPWLRLLLQMGALRDGGVLGSVLQVWQAIAEVELVAERE 335 Query: 356 DYPQGRWLREAWEVAQSV---PTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 REA + ++ + + G + L + +A+ + Q Sbjct: 336 WALALATTREAQQQLLALPQSSAYQRLGEAYAGRDFGRALRILQWRTLAAMQRQ 389 >UniRef50_D1C7Z9 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=2 Tax=Thermomicrobia (class) RepID=D1C7Z9_SPHTD Length = 478 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 109/422 (25%), Positives = 161/422 (38%), Gaps = 36/422 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ-------QVGRDFPVFLHPQT 54 ++YLVGG+VRD LLG PV D D+ + P+ AG VG F Sbjct: 44 ELYLVGGSVRDLLLGQPVTDLDF-ATSAEPELTKAAGAAAGADSVYTVGEQFGTVGFVFD 102 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGL 113 + T R+ L DL RRD TINA+A D +G + DP+ GL Sbjct: 103 GVSVEI-TTYREEHYPTPDRRPKVRLGTDLVGDLSRRDFTINAIAVDARDGTVHDPFGGL 161 Query: 114 GDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 DL+ R++R V F EDPLR+LR ARFAA+ L FR+ TLA MR M +LE Sbjct: 162 DDLERRIIRAVGDPKARFAEDPLRILRAARFAAQ---LDFRVDRRTLAAMRAM--GPQLE 216 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGI 230 ++ ER+ E L +L + LR + PE+ + + D + Sbjct: 217 RISRERIAAELNRLLIAPAAARGLALLHETDLLRWVLPEVVPMAEDTGAGRH---KDIWL 273 Query: 231 HTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQR 287 HTL + + P++ VR+A L HD K +T GH G L + +R Sbjct: 274 HTLRVVEQS---PPRLAVRWAALLHDAAKPMTRSVDARGEVHFFGHERVGADLARKALRR 330 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFP-MLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 L+ + D + E H ++ + +L A + A Sbjct: 331 LKQERALIDRVAGLVEMHLRPASYDSTWTDSAVRRLMLEAGDLWDDLLDLAAADVTSARA 390 Query: 347 RGRTGFESADYPQGRWLREAWE------VAQSVPTKAVVEAGFK--GVEIREELTRRRIA 398 + R E + + ++ + G I E R Sbjct: 391 HRQREAARRIAALREHARRLEEEHALAQLQSPLDGHELMAMFGRPPGRWIGEVKDHLREL 450 Query: 399 AV 400 + Sbjct: 451 VI 452 >UniRef50_B4S8E4 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=12 Tax=Chlorobiaceae RepID=B4S8E4_PROA2 Length = 489 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 110/422 (26%), Positives = 177/422 (41%), Gaps = 49/422 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 ++ YLVGG +RD LL P +D D +++G + Q GR+F VF E + Sbjct: 33 IECYLVGGYIRDVLLERPSQDIDIMIIGDPIAFAREVQKQLKGRNFVVF------ERFRT 86 Query: 61 ARTER---------------KSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN-- 103 AR E + S +LEDDL RRD T+NALA + N Sbjct: 87 ARLELDDAVEGPVLLEIVGARKESYNPDSRKPITEIGSLEDDLSRRDFTVNALALELNAL 146 Query: 104 --GEIIDPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLA 158 I+D Y G+ L + +L+ F +DPLR++R ARF+++ L F + DETL Sbjct: 147 NRNRIVDLYGGIEALHSGILKTPLEPEKTFSDDPLRMMRAARFSSQ---LEFSLTDETLD 203 Query: 159 LMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA 218 ++ M + ++ ERV E + + P + ++L + G L+ +FPE+ A+ G+ Sbjct: 204 AIKAMHTR--ISIVSRERVSHEFLKIMQSPKPSIGLKILFETGLLKEIFPELTAMAGIEQ 261 Query: 219 PAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGP 275 DT +HT + A S + +R A L HD+ K LT HGH Sbjct: 262 VDGL-GHKDTLLHTFQVVDKLAEKSDHLWLRVAALLHDIAKPLTKRFSRHTGWTFHGHEV 320 Query: 276 AGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF--PMLNPKTIVKLFDSIDAWRKPQ 333 G +L ++ + +R P E + + + H ++ + +L + + Sbjct: 321 VGTRLAAKIFRSMRWPLEPLEYVQKMIRLHHRPIPLSKEEISDSAVRRLM-----FEAGE 375 Query: 334 RVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEA---GFKGVEIRE 390 + L ADV + + Q E V K ++ G+EI E Sbjct: 376 ELNDLMTLCRADVTSKNPRKVRQIMQN--FNRVEEKIDEVAEKDLLAKWRPPVNGIEIME 433 Query: 391 EL 392 L Sbjct: 434 IL 435 >UniRef50_A2VMT0 Poly(A) polymerase pcnA n=5 Tax=Corynebacterineae RepID=A2VMT0_MYCTU Length = 514 Score = 283 bits (724), Expect = 9e-75, Method: Composition-based stats. Identities = 109/413 (26%), Positives = 164/413 (39%), Gaps = 36/413 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA------GYQQVGRDFPVFLHPQTH 55 ++YLVGG+VRDALLG D D+ + P+ + + G +F ++ Sbjct: 38 ELYLVGGSVRDALLGRLSPDLDF-TTDARPERVQEIVRPWADAVWDTGIEFGTVGVGKSD 96 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDPYN 111 + T R LE DL RRD T NA+A GE +DP Sbjct: 97 HRMEI-TTFRADSYDRVSRHPEVRFGDCLEGDLVRRDFTTNAMAVRVTATGPGEFLDPLG 155 Query: 112 GLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 GL L+ ++L S +FG+DPLR+LR ARF ++ LGF +A A + EM A + Sbjct: 156 GLAALRAKVLDTPAAPSGSFGDDPLRMLRAARFVSQ---LGFAVAPRVRAAIEEM--APQ 210 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 L ++ ERV E + L +P ++ G V+ PEI + A + H D Sbjct: 211 LARISAERVAAELDKLLVGEDPAAGIDLMVQSGMGAVVLPEIGGMR--MAIDEHHQHKDV 268 Query: 229 GIHTLMTLSMAAMLS---PQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVE 282 H+L L A L P + +R+A L HD+GK T P+ H H G K+V Sbjct: 269 YQHSLTVLRQAIALEDDGPDLVLRWAALLHDIGKPATRRHEPDGGVSFHHHEVVGAKMVR 328 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTF--PMLNPKTIVKLFDSIDAWRKPQRVEQLAL 340 + + L+ ++ D + H H + + + A + +L Sbjct: 329 KRMRALKYSKQMIDDISQLVYLHLRFHGYGDGKWTDSAVRRYVTDAGA-----LLPRLHK 383 Query: 341 TSEADVRGRTGFESADYPQG-RWLREAWEVAQSVPTKAVVEAGFKGVEIREEL 392 AD R +A L E + V G +I L Sbjct: 384 LVRADCTTRNKRRAARLQASYDRLEERIAELAAQEDLDRVRPDLDGNQIMAVL 436 >UniRef50_B6G1N2 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1N2_9CLOT Length = 448 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 87/445 (19%), Positives = 165/445 (37%), Gaps = 78/445 (17%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 + + VGG +RD+LLG D D + + P+++++ V G + E Y Sbjct: 23 FEAFAVGGCIRDSLLGRVPNDWD-IATSAKPEDIMNIFENTVETGIEHGTVTVVIDKEPY 81 Query: 59 ALARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 + T R G G +E+DL RRD TINA+A +++ ++D + G DL+ Sbjct: 82 EV-TTYRIDGDYTDGRHPDSVEFTENIEEDLSRRDFTINAMAYNNSTGLVDVFGGRDDLK 140 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 N+++R V F ED LR++R RF+A+ L F I ++T + EM + + ++ Sbjct: 141 NKVIRCVGDPIKRFEEDALRMMRGIRFSAQ---LEFSIENDTFKAIEEM--SDLISAVSI 195 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E L + + + G L+ + E+ + ++ E M Sbjct: 196 ERINVEFTKTLMSD--AKKIMIYHESGILKNILQELYKI----DSEDYNREFSAVEMIKM 249 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 ++ A + + R A + + G++ ++ +++R N+ Sbjct: 250 GVNCADLCKKDLACRLAGFFI---------------YINEAIGLENTRKILKKMRYDNKT 294 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV-------- 346 A + ++ + + K ++ DS+ + +E L A+V Sbjct: 295 ISKACELLKYGMRNISNNKEDLKYLLMKLDSV------EMLEDLIDLKAAEVDTYLEERK 348 Query: 347 ---------------RGRTGFESADYPQGRWLREAWE--------------VAQSVPTKA 377 G E+ L + K Sbjct: 349 SKFEEKSEEEKKIESVGIEVLEAFTVEALIVLNNVENTLKEIVDNGECFRVKDLDINGKD 408 Query: 378 VVEAGFK-GVEIREELTRRRIAAVA 401 ++ AG K G EI E L + + Sbjct: 409 LIAAGIKPGKEIGEMLNKILKEVIK 433 >UniRef50_B5JPR9 tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPR9_9BACT Length = 473 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 143/441 (32%), Positives = 200/441 (45%), Gaps = 46/441 (10%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ-----VGRDFPVFLH--PQTH 55 +VGG++RDALLGL KD D V G + + VG+ F V Sbjct: 32 CRVVGGSIRDALLGLEPKDFDVEVYGLDLDSIAQTLAKLGKTDLVGKAFAVVKLWTHGEE 91 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLG 114 ++A+ R E KSGSG+ GFT ++ E+ LKRRD TINAL D E+ID +NGL Sbjct: 92 YDFAIPRRESKSGSGHRGFTIETDAHLSEEEALKRRDFTINALLYDHATSEVIDYFNGLE 151 Query: 115 DLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 DL+ R+LRHVSPAF EDPLRVLR +FA R+ + +T AL R++ H E L Sbjct: 152 DLERRILRHVSPAFSEDPLRVLRAMQFAGRFE---MELHPDTAALCRKIGH--EFWTLPK 206 Query: 175 ERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERVW E E A +R+ + L G LR FPE++AL +P +WHPE D HTL Sbjct: 207 ERVWTEWEKWAKRSRSLSHGLRALVASGWLRY-FPELNALRSLPQDPEWHPEGDAWTHTL 265 Query: 234 MTLSMAAMLSPQV--------DVRFATLCHDLGKGLTPPELWPR------HHGHGPAGVK 279 L + + F LCHDLGK R GH V Sbjct: 266 YCLDALVRDTDWSSLAEAERGVLAFGVLCHDLGKARCTRWALKRGEKHWISPGHDSQSVW 325 Query: 280 LVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPM--LNPKTIVKLFDSIDAWRKPQRVEQ 337 L EQ ++R P+E+RD + H ++T P + ++ +L + P + Sbjct: 326 LAEQFFNKMRAPHELRDKVMALVGNHHFLNTVPEGGHSDASLRRLAKRL----SPATTHE 381 Query: 338 LALTSEADVRGRTGF--ESADYPQGRWLREAWEVAQSVP-------TKAVVEAGFKG-VE 387 L AD RGR E+ D + ++ + ++ G K Sbjct: 382 LVYVMTADHRGRPPLLSEAQDLRIAEFKIRIQKLDLKESAPSPILLGRHLIARGLKPSPN 441 Query: 388 IREELTRRRIAAV-ASWKEQR 407 R L A + S++++ Sbjct: 442 FRPILDAAYEAQLDGSFRDEA 462 >UniRef50_D1PLQ0 Poly(A) polymerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLQ0_9FIRM Length = 456 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 101/428 (23%), Positives = 153/428 (35%), Gaps = 47/428 (10%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHEEY 58 Y+VGG VRD+LLG D D + P ++ Q G Y Sbjct: 26 AYVVGGCVRDSLLGRRPGDWDIC-TSARPDQLRALFADQQLILTGEKHGTVGVVLHGSPY 84 Query: 59 ALARTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 + T R G+ V+ L +DL RRD TINA+A +ID G DL Sbjct: 85 EI-TTYRLDGTYRDHRHPDKVQFVSELAEDLARRDFTINAMAYAPGEGVIDLCGGRKDLA 143 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++R V F ED LR+LR RFAAR L F + L+ ++ Sbjct: 144 AGIIRCVGDPEARFAEDALRILRALRFAAR---LDFALDP--ATEAAAREARDSLQAVSA 198 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCG-ALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER++ E + L + + L G L PE+ G P +WH D HT Sbjct: 199 ERIYTELDGLLMAQYAG---KTLAQYGEILAGAVPEVGPCIGCTQPGRWHC-FDVWQHTA 254 Query: 234 MTLSMAAMLSPQ----VDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQLCQ 286 ++ + +R+AT HD+ K L P+ GH G + + + Sbjct: 255 AAVTALDLRGQDTRGARVLRWATFLHDIAKPLCRSVGPDGAAHFKGHNQRGAAVARAILR 314 Query: 287 RLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADV 346 RL+ P+ + + A + HD I+K + A + +L AD+ Sbjct: 315 RLKAPSYLLEGAVGLIAIHDAPLPEG---DAAILKCLNRYGA----VSLRRLCALKYADL 367 Query: 347 RGRT-------GFESADYPQGRWLREAWE-----VAQSVPTKAVVEAGFK-GVEIREELT 393 E + R + +V ++EAG G + L Sbjct: 368 DAHALTPEVACRREDVTIFENRMTELSKNGCFTIRQLAVNGSDLMEAGLPAGPAVGRVLH 427 Query: 394 RRRIAAVA 401 A + Sbjct: 428 ALLSAVME 435 >UniRef50_C3PKZ9 tRNA nucleotidyltransferase n=2 Tax=Corynebacterium RepID=C3PKZ9_CORA7 Length = 545 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 118/454 (25%), Positives = 169/454 (37%), Gaps = 65/454 (14%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ------QVGRDFPVF--LHPQT 54 +YLVGG+VRDALLG D D+ + P + + G DF + Sbjct: 108 LYLVGGSVRDALLGRLGNDLDF-TTPARPDVVYSILEEWAETVWDTGIDFGTVSAAYKGQ 166 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ----DDNGEIIDPY 110 E R++ G TLE DL RRD +NA+A D E DP Sbjct: 167 QIEITTFRSDSYDGQSRNP---EVMYGDTLEGDLVRRDFKVNAMAIELRSDGTREFHDPM 223 Query: 111 NGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 GL DL R+L +F +DPLR+LR ARFAA+ L F +A M +M AG Sbjct: 224 GGLDDLAKRILDTPDAPEISFHDDPLRMLRAARFAAQ---LEFDVAQRVRDAMIDM--AG 278 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 E++ +T ERV E + P +L D G +FPEI AL P H D Sbjct: 279 EIQRITVERVQVELNKLICGTAPWKGIDLLVDSGIADYVFPEIPALRMAPDEHAQHK--D 336 Query: 228 TGIHTLMTLSMAAMLS---PQVDVRFATLCHDLGKGLTPP--ELWPRHHGHGPAGVKLVE 282 H+L L A P + +R+A L HD+GK T + H H G KL Sbjct: 337 VYAHSLTVLRQAMEQEEEGPDLILRWAALLHDIGKPDTRDTTDGKVSFHHHEVVGAKLTR 396 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTF--PMLNPKTIVKLFDSIDAWRKPQRVEQLAL 340 + ++L+ P + + H H F + + + +L Sbjct: 397 KRLRKLKFPKATTEDIGQLVYLHMRFHGFGDGQWTDSAVRRYVTDAG-----DLLPRLHK 451 Query: 341 TSEADVRGRTGFESADYPQ-----------GRWLREAWEVAQSVPTKAVVE-AGFK-GVE 387 AD R ++ + + V + ++E G + G E Sbjct: 452 LVRADCTTRNERKARRLQRTYDQLEERIADIAAKEDLARVRPDLDGNEIMEILGLEPGPE 511 Query: 388 IREE---LTRRR-----------IAAVASWKEQR 407 + + L R IA + W R Sbjct: 512 VGKAWSYLKELRLEEGPLEREVAIAKLREWWNSR 545 >UniRef50_D1RE93 Multifunctional CCA protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1RE93_LEGLO Length = 382 Score = 281 bits (719), Expect = 3e-74, Method: Composition-based stats. Identities = 161/411 (39%), Positives = 214/411 (52%), Gaps = 56/411 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG-----RDFPVFLHPQTH 55 MKIYLVGGAVRD LLG KD DW+VVG T EML GY+ V +FPVFLHP+T Sbjct: 1 MKIYLVGGAVRDKLLGFAPKDNDWLVVGGTRDEMLKLGYKPVPNNHGTSEFPVFLHPETK 60 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDPYN 111 EEYALAR E ++G G+ GF + +T+ DDLKRRDLTINA+A GE+IDPYN Sbjct: 61 EEYALARLEERTGYGHGGFEFDTSSSITIVDDLKRRDLTINAMAFPVEDEKMGELIDPYN 120 Query: 112 GLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 G DL+NR+LRH+SPAF +DPLR++R ARFAA LGF +A ET+ LM +M G++ Sbjct: 121 GKVDLENRILRHISPAFIDDPLRLIRTARFAA---CLGFEVAAETMELMTQMVIEGKVSE 177 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 L ER+W E E A+ +P+ FF VL+ C A R+LFP I P P Sbjct: 178 LRNERIWMEMERAIKGPHPEKFFDVLKKCSADRILFPYIK----TPGPG----------- 222 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 + + AA VRFA L DL + + V + C++ + Sbjct: 223 -INAMQRAADHKNSAPVRFAALMLDLTQ-------------------EEVTKFCKQFNLS 262 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 N+ RDLA L + L+ I+ L ++ A++ +R + V GR Sbjct: 263 NQYRDLALLAIKNLPQFQRLSELDAPEILILLTNMGAFQNKERFNECL-----HVFGRYT 317 Query: 352 FESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 E +R A+ A S+ TK + G EI + RI A+ Sbjct: 318 QEPG---YVEKIRNAFHAATSINTKELASKYI-GHEITRRIKILRIEAIQQ 364 >UniRef50_A8S304 Putative uncharacterized protein n=2 Tax=Clostridium RepID=A8S304_9CLOT Length = 442 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 89/435 (20%), Positives = 149/435 (34%), Gaps = 73/435 (16%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYA 59 + Y+VGG VRD LLG D D + + P+++ + + V G E Y Sbjct: 28 EAYVVGGCVRDMLLGREPGDWD-ITTSALPEQVKEVFRRTVDTGIQHGTVTVMMGKEGYE 86 Query: 60 LARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + T R G G L +DLKRRD TINA+A + + +D + G+ DL+ Sbjct: 87 V-TTYRIDGEYSDGRHPNSVEFTPDLVEDLKRRDFTINAMAYNSHTGFVDKFGGVEDLEK 145 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 ++R V F ED LR+LR RF+A+ LGF I + T ++ A + H++ E Sbjct: 146 GIIRCVGEPMDRFTEDALRILRAIRFSAQ---LGFSIEERTYEAIK--VIAPNMVHVSKE 200 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E L + +P + ++ + G + K+H Sbjct: 201 RIQVELTKLLLSSHPD-YISLVYETGISPFV------------SEKFHGAYAADSGDWAV 247 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 S+ A + +R+A + + + L++ N+ Sbjct: 248 PSIPAGVPAVKHMRWAAFLREC-------------------SASQAAGILKDLKLDNDTS 288 Query: 296 DLARLVAEFHDLIHTFPM------------------LNPKTIVKLFDSIDAWRKPQRVEQ 337 R + E+ P+ + +P+ + Sbjct: 289 YRVRTLVEWQGKKVGAEDGEKDCLKHGKEEGMKEIAKQPEPSRASIRRAMSQMEPELFDD 348 Query: 338 LALTSEADVR-GRTGFESADYPQGRWLREAWE--------VAQSVPTKAVVEAGFK-GVE 387 L ES Q R L E +V ++ AG K G E Sbjct: 349 LLTLKMCLSEDASDDRESQWLCQVRDLTEEIRSNRDCISLKTLAVSGHDIMGAGVKPGRE 408 Query: 388 IREELTRRRIAAVAS 402 + L R + Sbjct: 409 VGNTLARLLDMVLEE 423 >UniRef50_Q0TV45 PolyA polymerase family protein n=9 Tax=Clostridium perfringens RepID=Q0TV45_CLOP1 Length = 424 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 82/408 (20%), Positives = 152/408 (37%), Gaps = 44/408 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTH--E 56 + ++VGG VRD+LL +D D + + P+++ + + + G Sbjct: 21 FEAFIVGGCVRDSLLNKKPQDYD-ITTNAFPEKIEELFDKTIPTGIKHGTVTVLIDKNPY 79 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E R + + + +E+DL RRD TINA+A D +NG DL Sbjct: 80 EVTTYRVDGEYLNNRKPKDVKFV--SNIEEDLSRRDFTINAMAYSPYLGFKDCFNGKDDL 137 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +N+L+R V F ED LR+LR RF+ + L F+I T +R+ + +++++ Sbjct: 138 KNKLIRCVGDPDKRFSEDALRMLRAIRFSCQ---LNFKIEKLTAESIRK--NFKLIKNIS 192 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E + + +P +LR G L E L + + DT Sbjct: 193 MERIQSEFTKIILSNDPDRGLMLLRKLGFSDFLVEEFKNLKLINCYDLYDDIHDTY---- 248 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 + L ++ VR A L + + + V+ + ++L+ N Sbjct: 249 ---GLINSLPKKLHVRLAGLFYKV--------------FNSENAVEKCRTILKKLKYDNN 291 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQ----LALTSEADVRGR 349 + + E + I + K + L +S+ ++ L+ E D Sbjct: 292 TINDTCNLVENINNISC--NMTRKKLKLLINSVGTENIFDLLDLQKSYLSYMDEYDTECI 349 Query: 350 TGFESADYPQGRWLREAWEVAQSVPTKAVV-EAGFK-GVEIREELTRR 395 ++ + ++ ++ E FK G I L Sbjct: 350 DILKNRVSDILASKEPIFIKDLAITGNDLITELNFKPGKNIGVILNFL 397 >UniRef50_D2L6A0 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L6A0_9DELT Length = 397 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 134/414 (32%), Positives = 183/414 (44%), Gaps = 46/414 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEY 58 MK YLVGGAVRD LLG PV D+D+++V +TP+ L +QVG+ FPVF+ +Y Sbjct: 1 MKRYLVGGAVRDILLGRPVVDQDYLIVDATPEAFLRRYRRARQVGKTFPVFMLG--SAQY 58 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ----DDNGEIIDPYNGLG 114 A R + +DL RDLTINA+A G + L Sbjct: 59 AWPR------------------GDDINEDLLARDLTINAMAMGDSRQIAGRLHFHPLALT 100 Query: 115 DLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 DL++R+LR + +DPLRV R ARFAA F E LA M+ + G L + Sbjct: 101 DLRDRILRPCGEMSMFDDPLRVYRAARFAASLP--DFSPHPELLAQMKAVAACGVLSDIF 158 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERV +E AL P FF +L + G L PE++A VPA H H Sbjct: 159 AERVAQEVRKALDAPKPSRFFALLAETGCLLPWMPELEAARHVPAGPAEHHSGSVFAH-- 216 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 MA L+ + + +CHDLGK TP WPRHHGH AG + E+L +RL++PN Sbjct: 217 -MCDMADQLAGKPIAGWMAVCHDLGKTRTPECEWPRHHGHDEAGADVAEELGKRLKLPNR 275 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 +R+ A FH + L T V + + + VE L AD E Sbjct: 276 VRESGVAAARFHMKAARYHELRAGTRVDMLTWLHKH---ELVEPLFEVVRADSG-----E 327 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQR 407 R ++ V K + +G E+L R +A + Sbjct: 328 DVTGLVKRDMKLMLSVHLP--GKQRM----RGPLSGEKLRNLRCQKLAEMDRKL 375 >UniRef50_B1GZF8 CCA-adding tRNA nucleotidyltransferase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GZF8_UNCTG Length = 461 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 94/434 (21%), Positives = 158/434 (36%), Gaps = 50/434 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVG---------STPQEMLDAGYQ------QVGRD 45 +Y+VGG VRD + KD D +V G + + + Sbjct: 26 FDVYIVGGFVRDLFIKREPKDLDIMVCGRGSNLSMQSAGINFSKILAKKYKLDKPVIFER 85 Query: 46 FPVFLHPQTHEEYALA--RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN 103 F EE R E + + ++E D RRD TINAL N Sbjct: 86 FGTSKLFMDSEEVEFVMPRREYYNANSRNP----DTQIASVEQDALRRDFTINALFLRLN 141 Query: 104 G-EIIDPY-NGLGDLQNRLLRHVSPA-----FGEDPLRVLRVARFAARYAHLGFRIADET 156 +I+D G+ D++N+++R P+ F +DPLR+LR R + L F+I ET Sbjct: 142 DMKILDFTSQGVVDIKNKIIRVTDPSNIEIIFKQDPLRILRAVR---QSVQLDFKIETET 198 Query: 157 LALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGV 216 M+ + +E ++PER+ E L + P F+++ + + PE+ L + Sbjct: 199 YNAMK--ISSPSIEIVSPERIRDEINKILIEKIPSKAFKIMDEINLSVKILPEVARLKNL 256 Query: 217 PAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPR--HHGHG 274 K+H + D +HTL L + +R A L HD GK T + R +GH Sbjct: 257 EQLEKYHTD-DVFVHTLKVLDRTK---NDIILRMAALLHDTGKYATCKKNGGRICFYGHD 312 Query: 275 PAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF-PMLNPKTIVKLFDSIDAWRKPQ 333 K E + +RL+ E V + H + + + Sbjct: 313 AESAKEAEAVLKRLKYSKEFIQKTVSVIKNHMYPKMYSDDWTDGAVRRFVKRCSGE---- 368 Query: 334 RVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELT 393 ++ + S AD G+ + + + + P + G E+ Sbjct: 369 -LDLIMEISRADY-GKDSNDVKLVKLKKRIEDLKLKNMLYPKPEL----LTGREMMRIFN 422 Query: 394 RRRIAAVASWKEQR 407 R + K + Sbjct: 423 RLSGKWIRKAKSKI 436 >UniRef50_A1AVM9 Polynucleotide adenylyltransferase region n=3 Tax=Gammaproteobacteria RepID=A1AVM9_RUTMC Length = 362 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 147/391 (37%), Positives = 209/391 (53%), Gaps = 40/391 (10%) Query: 1 MKIYLVGGAVRDALLGL--PVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEY 58 MK+YLVGGAVRD LLG+ ++DW+VVGS+ ++MLD GY+QVG++FPVFLHP T EEY Sbjct: 1 MKVYLVGGAVRDQLLGIADEFTEKDWMVVGSSSKQMLDLGYRQVGKNFPVFLHPGTQEEY 60 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 ALAR ERK G+GY GF + VTLE DL RRDLTINA+A GE+ DP+NG DL N Sbjct: 61 ALARLERKIGTGYKGFKFDISSQVTLEQDLFRRDLTINAMA-QKAGELFDPFNGQEDLNN 119 Query: 119 RLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 +LRHVS AF EDP+R+LR+ARFAAR+ GF++A +T LM +M +GE++ LTPERV+ Sbjct: 120 GILRHVSNAFSEDPVRILRIARFAARFKKFGFKVAHQTHQLMSQMVTSGEVDALTPERVF 179 Query: 179 KETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSM 238 KE AL+ P FF+VL CGA + +F +D + H + L Sbjct: 180 KELNKALSYETPSAFFKVLTACGAYQKVFSSLD-----NQVHQNHSNSFVFLDNL----- 229 Query: 239 AAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLA 298 + + ++F+ D + ++ LC ++ P + + L+ Sbjct: 230 ---NTDKAHIKFSIWLKDENRHN-------------------IKALCNIIKCPKQYQQLS 267 Query: 299 RLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES---- 354 LV++F+ F + + F D R R E L T + E Sbjct: 268 ELVSQFYQFSQDFTNHSSNEVFDFFAKTDILRHKDRFEDLLSTFKLLEIDIVPIEHLRDL 327 Query: 355 -ADYPQGRWLREAWEVAQSVPTKAVVEAGFK 384 D + + A + + +++ FK Sbjct: 328 LKDINISKLDKSDIAKAIQIEKRLIIDLFFK 358 >UniRef50_B0N1P8 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0N1P8_9FIRM Length = 451 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 110/404 (27%), Positives = 179/404 (44%), Gaps = 29/404 (7%) Query: 2 KIYLVGGAVRDALL-GL-PVKDRDWVVVGSTPQEMLDAGYQQ-----VGRDFPVF-LHPQ 53 + +LVGG VRD L+ D D V G + E+ + +G+ F + L Sbjct: 24 RAFLVGGIVRDMLIYNRVDYHDVDVEVYGLSVDELEELLANYGNVNSIGKSFGILKLDVL 83 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNG 112 + ++AL RTE K+G + F ++ L+ RRDLTINAL + G+I D ++G Sbjct: 84 PNFDFALPRTEIKTGESHQDFDVTVNQNLDLKVAASRRDLTINALMYEIKTGKIYDFFHG 143 Query: 113 LGDLQNRLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 D++ R LR VS F EDPLRVLR A+FA+R L F I T + ++M L+ Sbjct: 144 QEDIEKRTLRMVSETTFIEDPLRVLRTAQFASR---LDFCIETATKLMCKKMVQNKSLDK 200 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 L+ ERV++E L ++ P + L++ ++ L+P +D L +HPE D H Sbjct: 201 LSKERVFQEYSKLLLSQQPSIGLTFLKE---IKALWPCLDVLSKTMQRLDYHPEGDVWRH 257 Query: 232 TLMTLSMAAML----SPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQR 287 TL+ +AA+ S + ++ L HD+GK T GH AGVK+ Q + Sbjct: 258 TLLVTDLAALCCHKTSNPLGFMWSALLHDIGKA-TVTTKDGHAPGHNEAGVKIFNQEVKA 316 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 +++ + + +H + K F + +E L L ++ D Sbjct: 317 FIPDKQLQKYIKTMIFYHMHLMNMVRNEAKD-YSYFKILKGIDGIVTIEDLILITKCDKL 375 Query: 348 GRTGFESADYPQGRWLREA-------WEVAQSVPTKAVVEAGFK 384 GR E + + ++ + V + G + Sbjct: 376 GRYKDEHENINRFDYVMKEKMARLSTKAQLPLVDGYDLKALGIE 419 >UniRef50_C0A6X1 Polynucleotide adenylyltransferase region n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6X1_9BACT Length = 499 Score = 277 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 136/447 (30%), Positives = 178/447 (39%), Gaps = 60/447 (13%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVG---STPQEMLDAGYQQ--VGRDFPVFLHPQTHEEY 58 LVGG VRDALLGL KD D V G +T L VGR F V EEY Sbjct: 38 RLVGGCVRDALLGLVAKDFDVEVCGVDFATLHRALSPFGATDVVGRSFGVIKLRLDGEEY 97 Query: 59 AL--ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGE----------- 105 R E K+G+G+ GF P +T + RRD TINA+A D + Sbjct: 98 DFSLPRRESKTGAGHRGFAVEPEPGLTDAEAAARRDFTINAIAWDPFADAGGGGGRREGG 157 Query: 106 --IIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREM 163 +IDP+ G+ DL+ +LRH S AF EDPLRVLR +FA R+ +A ET AL R + Sbjct: 158 GGLIDPHGGVRDLRAGVLRHTSAAFVEDPLRVLRAFQFAGRF---DLTLAPETAALCRAI 214 Query: 164 THAGELEHLTPERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKW 222 + L ERVW E + A + P VL + G L V FPEI AL G P W Sbjct: 215 STT--FTELPKERVWGEWQKWAEKSPKPARGLAVLEESGWL-VHFPEIAALRGCPQEPDW 271 Query: 223 HPEIDTGIHTLMTLSMAAMLSPQ--------VDVRFATLCHDLGKGLTPPEL------WP 268 HPE D HT A L + A L HD GK T Sbjct: 272 HPEGDVFAHTAFCCDALAALPAWQTLPPPRRRLLMLAMLAHDFGKPATTVRAVRAGAERW 331 Query: 269 RHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPML-----NPKTIVKLF 323 GH AGV + E R+ P + + H + H + I +L Sbjct: 332 TSPGHESAGVPVAEAFLTRIGAPLDHAPFITPIVANHLVHHHGGKGGGGGYSDSQIRRLA 391 Query: 324 DSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVP--------- 374 + P +E L L D GR +S + ++ Sbjct: 392 RRL----APATIEDLCLIMTGDSEGRPPRKSPESLVLINQLHTRAGELAIVDATPRPILL 447 Query: 375 TKAVVEAGFK-GVEIREELTRRRIAAV 400 + ++ AG + G + + L A + Sbjct: 448 GRHLIAAGERPGPDFKPVLDAAYEAQL 474 >UniRef50_C6BVC7 Polynucleotide adenylyltransferase region n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BVC7_DESAD Length = 387 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 114/410 (27%), Positives = 176/410 (42%), Gaps = 36/410 (8%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEY 58 +KI + GG++RD LLG KD D+++ +P+E L A + VG+ + +F + Sbjct: 8 LKILIAGGSIRDLLLGRSPKDLDYLIASGSPEEFLAAFPKARPVGKSYEIFYLKGLEFSF 67 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 D T++ DLK RD T+N+ A D++GE+ NGL DL+N Sbjct: 68 --------------PRAKGNNTDETIDLDLKARDFTVNSFALDEDGELYAHPNGLEDLRN 113 Query: 119 RLLRH-VSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R+LR F EDPLRV R A F +R+ F E +A M+ L + P+R+ Sbjct: 114 RVLRPSFPDTFKEDPLRVFRAATFISRFPE--FSPHPELIAEMKRCADNDWLADIAPDRI 171 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 E AL+ P F ++L L F E + +PA + + HT + Sbjct: 172 GVELRKALSGPKPGNFLRLLIQGNCLEPWFSEFNGSDNIPAGPPEYHDKSVAGHTAEIMD 231 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 A + + + HDLGK LT ++ P H+GH AG+ ++L RL +P + Sbjct: 232 EVAG---EPLTCWMAMSHDLGKVLTTADILPSHYGHDKAGMIPAKELGSRLMLPVKFIRA 288 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY 357 AE H + L P T V L + +E + AD RG E+A Sbjct: 289 GESAAELHMKAGNYQELRPGTKVDLLMKLHV---SGLLENMISLCNAD-RGEGLLETAP- 343 Query: 358 PQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQR 407 L E +V+ + + G E E+L R + ++ R Sbjct: 344 ---ADLAEILKVSLPAHERNL------GKESGEKLRNMRAMKIKTFSGSR 384 >UniRef50_C4LGI1 tRNA nucleotidyltransferase n=3 Tax=Corynebacterium RepID=C4LGI1_CORK4 Length = 511 Score = 276 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 97/416 (23%), Positives = 156/416 (37%), Gaps = 44/416 (10%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ------VGRDFPVF--LHPQT 54 +YLVGG+VRDALLG D D+ + P ++ G D+ Sbjct: 65 LYLVGGSVRDALLGRLSSDLDF-TTNARPHDIHRLLESTCDAVWDTGIDYGTVSGQRSGQ 123 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGE----IIDPY 110 E R + G +L+ DL RRD T+NA+A + G+ DP Sbjct: 124 DIEVTTFRADTYDGESRNP---EVTFGDSLDKDLTRRDFTVNAMAVEVRGDGSQVFHDPL 180 Query: 111 NGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 +GL DL L +F +DPLR+LR RF ++ LG R+A M M AG Sbjct: 181 HGLTDLVRGYLDTPDDPAISFHDDPLRMLRACRFVSQ---LGLRVAPRVREAMERM--AG 235 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 +++ +T ER+ E + + +P +++ D G + PEI A+ H D Sbjct: 236 DIQRITAERIHAELDKLILGDHPTDGIELMVDTGLADYIIPEIPAMRMTRDEHMQHK--D 293 Query: 228 TGIHTLMTLSMA---AMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLV 281 H+L L A P + +R+A L HD GK T P + H G K+ Sbjct: 294 VYAHSLQVLRQAIDREPDGPDLVLRWAALLHDCGKPSTRAPKPGGGVTFYHHDVVGAKMA 353 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPM--LNPKTIVKLFDSIDAWRKPQRVEQLA 339 + + L+ + + H H + N + + + +L Sbjct: 354 RKRFRALKYSKQFIKDVSGLIYLHQRFHGYTEKAWNDSAVRRYVTDAG-----PLLPRLH 408 Query: 340 LTSEADVRGRTGFESADYPQGRWLREAWEVAQSV-PTKAV--VEAGFKGVEIREEL 392 AD R ++ R + + + + + + G +I L Sbjct: 409 RLVRADCTTRNQAKAR--RLQRLYDDLERRIEEIQHKEDLARIRPDLDGNDIMTIL 462 >UniRef50_C5ESK6 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ESK6_9FIRM Length = 448 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 87/443 (19%), Positives = 153/443 (34%), Gaps = 72/443 (16%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYA 59 + Y+VGG VRD +LG D D + + P+++ + V G E Y Sbjct: 22 EAYVVGGCVRDMILGREPGDWD-ITTSALPEQVKQVFRRTVDTGIQHGTVTVMMGDEGYE 80 Query: 60 LARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + T R G G +L +DLKRRD TINA+A + N ++D + G+ DL Sbjct: 81 V-TTYRIDGEYADGRHPDSVTFTPSLTEDLKRRDFTINAMAYNGNTGLVDEFGGMDDLDR 139 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 ++R V F ED LR+LR RF+A+ LGF I T +R + A + H++ E Sbjct: 140 GIIRCVGEPMDRFSEDALRILRAIRFSAQ---LGFTIEGRTYEAIRAI--APNMVHVSKE 194 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLF---------------------------- 207 R+ E L + NP ++ + G + Sbjct: 195 RIQVELTKLLLSPNPGH-INMVYETGISPYVSETFHKVYCREEDGGLDEGKQVEREDGQR 253 Query: 208 PEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELW 267 PE E + G + ++ A + P +R+A Sbjct: 254 PECADRQRPEGENGRQVEREDGKPFFVIPAIPAQVPPVRHMRWAAFLRKC---------- 303 Query: 268 PRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSID 327 ++ + L++ N+ + R + + D + I ++ Sbjct: 304 ---------PPDEAVRILKDLKLDNDTINRVRTLVSWQDYRLGPDKYS---IRTAMSRME 351 Query: 328 AWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWE-------VAQSVPTKAVVE 380 ++ ++ + G + + E +V +++ Sbjct: 352 PDLFDDLLDFRMCLAQMESEGNKTCQEHLAHTAMLVDEIRRDGDCISLKTLAVGGNDIIK 411 Query: 381 AGFK-GVEIREELTRRRIAAVAS 402 AG K G E+ L R + Sbjct: 412 AGVKPGKEVGLALARLLEMVLEE 434 >UniRef50_B8QTX7 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Erwinia phage phiEa21-4 RepID=B8QTX7_9CAUD Length = 422 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 132/393 (33%), Positives = 183/393 (46%), Gaps = 30/393 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M +LVGG++RDA+ G D D+VVV +T +++LD G ++VG+ FPVF+ E A+ Sbjct: 1 MDFFLVGGSIRDAVFGKASSDHDFVVVNATEEQLLDLGLKKVGKAFPVFI-TDDGTEIAM 59 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA-------QDDNGEIIDPYNGL 113 AR E +G GY F VTL++DL RRD TINA A + + I Sbjct: 60 ARRENSTGEGYNDFEVETD-GVTLDEDLLRRDFTINACASAVVNGGANTDELICAHPMSR 118 Query: 114 GDLQNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 DL +R+LR V F EDPLR+LR RFAAR+ I ET AL R+M A L HL Sbjct: 119 YDLAHRILRVVDADRFKEDPLRILRGLRFAARH---NLFIEPETKALFRQMIEANCLAHL 175 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ER+WKE E A + N F + FPEI + GV P K+HPE D HT Sbjct: 176 PKERIWKEIEKAASAENFWKFVSLCGKFNL----FPEISGMKGVRQPKKYHPEGDVLNHT 231 Query: 233 LMTLSMAAMLS---------PQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQ 283 ++ L + +V LCHD+GK LT E HGH L+ Sbjct: 232 VLALKHYEEVELPQYGWNSGDRVTQSLCILCHDMGKRLTLSE-RGNLHGHESDVRDLL-S 289 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 +R+ P +R + AE H +H + + + + + V L +T Sbjct: 290 FVERIGAPKSVRVATQFCAEQHHRVHGMFVRRANRLALWLEEHNQFNNQAIVNALCMTCV 349 Query: 344 ADVRGRTGFESADYPQGRWLREAWEVAQSVPTK 376 +D R + Y Q L EA + + + Sbjct: 350 SDANAR--LQKVPYLQMNMLAEAVSQTRKLSPE 380 >UniRef50_Q1ASB2 Polynucleotide adenylyltransferase region n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1ASB2_RUBXD Length = 510 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 105/455 (23%), Positives = 167/455 (36%), Gaps = 62/455 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY------QQVGRDFPVF--LHPQ 53 ++YLVGG VRDAL G ++ D + P E+ VG F Sbjct: 27 ELYLVGGYVRDALSGRRGEEVD-AATDARPPEIKRLLRPHAGYMWDVGERFGTIGAAVDG 85 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNG 112 E R++R + + +L DL RRD TINA+A D +G IIDP+ G Sbjct: 86 YRVEVTTYRSDRYAEG---DRHPEVSFGESLMGDLARRDFTINAVAADALSGGIIDPFEG 142 Query: 113 LGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARY--AHLGFRIADETLALMREMTHAG 167 DL+ ++R V EDPLR+LR RF A F + + +RE +A Sbjct: 143 RRDLELGIIRPVGDPLERMREDPLRMLRAVRFVATLSTPEKPFEMTADLERAIRE--NAR 200 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 LE ++ ER+ +E + L + NP + + L G +R + PE V + H + D Sbjct: 201 WLESISAERIREEFDRILLSPNPALGLRALVRLGLMRYVVPEFMETVDVRQDTELHHK-D 259 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT------------------------- 262 HTL+ + + P+ +R A HD+GK T Sbjct: 260 VFEHTLIVV---ENVEPEPTLRRAAFFHDIGKPRTLVYEHRCTYCGARSVRREAGEGECE 316 Query: 263 -----PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF----PM 313 +GH G + + +RL + D + H ++ Sbjct: 317 ECGGRTVARKIHFYGHENVGSGIARRAMRRLAYSKDEVDAVAHLVREHMRPMSYAMGRDP 376 Query: 314 LNPKTIVKLFDSID---AWRKPQRVEQLALTSEADVRGRTGFESADYPQ-GRWLREAWEV 369 + + R+ V+ L + AD+ G + R LRE + Sbjct: 377 WTDSAVRRFIRDAHLVRGDRELANVDMLLKLARADITGSAPRRRRAAEESWRSLRERVDR 436 Query: 370 AQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWK 404 + +++ G E+ E R + K Sbjct: 437 VREQDAIERLKSPLDGNELMEHFGRGPGRWIKHIK 471 >UniRef50_C3WFG0 Poly(A) polymerase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WFG0_FUSMR Length = 446 Score = 274 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 94/420 (22%), Positives = 166/420 (39%), Gaps = 40/420 (9%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY----QQVGRDFPVFLHPQTHEEYA 59 Y+VGG VRDALLGL KD D+ V +++L+ +++G+ F + Y Sbjct: 23 YIVGGYVRDALLGLEPKDCDF-VTDIEYEKLLNIFSEYSPKEIGKHFGIIQIKIDGVHYE 81 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 +A+ + G + +DLKRRD TINA+A D + D++++ Sbjct: 82 IAKMRQDKGIPKDRKEQEIEFTKNIYEDLKRRDFTINAIAFDGEKFYYGDSDSQKDIESK 141 Query: 120 LLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 LR V EDPLR+LR RF A + ++ + L++L+ ER Sbjct: 142 TLRFVGECKKRIEEDPLRILRYFRFLATKDLK--HLDEDVEE---ISKYRELLQNLSVER 196 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + +E + +T +N ++L D L ++ PE G H H L L Sbjct: 197 IREEFDKIITGKNTYNILKILSDKKILEIIIPEWKECRGFNQRNIHHI-YTVDEHILQAL 255 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 M + R A HD+GK + + H ++ +++ RLR Sbjct: 256 KETDM---DLITRLAIFFHDIGKPKCFSLGEDGKGHFYNHELISAEMAKEIMGRLRYDKN 312 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 + + ++H L++ K I K+ + + + + + + AD + Sbjct: 313 SIEKVYRIIQYH-LVYRIDN-EEKFIKKMMNRL----EKEDMLRYFQVLRADRKTHRPP- 365 Query: 354 SADYPQGRWLREAWE-----------VAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVA 401 ++ Q L + ++ ++ K ++E GFK G I E L + Sbjct: 366 -YNFEQIERLEKLYQDIVEKNLPISIKDLNISGKELLENGFKQGKNIGEVLKYLLNQVLE 424 >UniRef50_C4XGZ8 Putative tRNA nucleotidyltransferase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XGZ8_DESMR Length = 391 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 128/409 (31%), Positives = 180/409 (44%), Gaps = 46/409 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEY 58 MK YLVGGAVRD LLG PV D+D+++V +TP+ + +QVG+ FPVF+ +Y Sbjct: 1 MKRYLVGGAVRDILLGRPVVDQDYLIVDATPEAFVRRYRRARQVGKTFPVFMLG--SAQY 58 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ----DDNGEIIDPYNGLG 114 A R ++ +DL RDLTINA+A + G + L Sbjct: 59 AWPR------------------GDSVAEDLLARDLTINAMAMGDSREIAGRLHFHPLALS 100 Query: 115 DLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 DL++R LR + +DPLRV R ARFAA F E +A MR + G L + Sbjct: 101 DLRDRWLRPCGEMSMFDDPLRVYRAARFAASLP--DFSPHPELVAQMRAVAACGVLGDVF 158 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERV +E AL T P FFQ+L D G L PE++A VPA H + H L Sbjct: 159 AERVAQEVRKALGTTKPSRFFQLLADTGCLLPWLPELEAARHVPAGPPEHHDGSVFDHML 218 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 + + A + +CHDLGK TP WPRHHGH G + +L +RL++PN Sbjct: 219 DMVDILAG---DALAGWMAVCHDLGKIATPECEWPRHHGHDDRGEGVAGELGRRLKLPNR 275 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 +R+ A+ H + L T V + + VE L AD + Sbjct: 276 VREAGEAAAKLHMKAARYHELRAGTRVDMLTWLHKH---DMVEPLFEVVRADSGASVLPQ 332 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 + ++ + + +G E L R +A Sbjct: 333 AK-----------RDLKVMLSVHLPGKQRQRGPLSGERLRNLRCQKLAE 370 >UniRef50_C7N4V8 tRNA nucleotidyltransferase/poly(A) polymerase n=2 Tax=Slackia RepID=C7N4V8_SLAHD Length = 467 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 98/443 (22%), Positives = 159/443 (35%), Gaps = 56/443 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHE----- 56 + ++ G VRD L+G D D + + + + D Q + + T Sbjct: 26 EAWVTGSYVRDMLMGRIPHDLD-ISTSARWETIRDLFSSQGFKVYETGTDRGTVTVNTGA 84 Query: 57 ---EYALARTERKSGSGYTGFT-------------CYAAPDVTLEDDLKRRDLTINALAQ 100 E RTE F ++E DL RRD T+NALA Sbjct: 85 HLVEITTFRTEEPIEGTRIAFQNAEHRKLSVWEPSSRFRFTNSVEKDLLRRDFTMNALAF 144 Query: 101 DDNGEIIDPYNGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETL 157 + N I+DP+ G+ D+ N +R V F +DPLR+LR ARFA++ LGF + T Sbjct: 145 NPNCGILDPFGGVKDISNETIRAVGEPSERFWQDPLRILRAARFASQ---LGFDVESRTK 201 Query: 158 ALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVP 217 + A L+H +R+ E L + + + + V PE + G+ Sbjct: 202 EAA--LASAPLLKHAPAQRIEAEFARLLQGDHARQAI--MDWIDVIGVFIPEALPMKGLD 257 Query: 218 APAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGL---TPPELWPRHHGHG 274 K+H D HT T+S+A Q +R+A HD+GK E GH Sbjct: 258 QRTKYHI-YDVLEHTAYTVSLA---PQQRVLRYAAFLHDIGKPEVFRIDEEGVGHSPGHA 313 Query: 275 PAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR 334 AG + EQ+C RL++ + + HD P+++ K + + Sbjct: 314 AAGAVISEQVCSRLKLREDEAAEICTLVGAHD---DRISPTPRSVRKALRRLGGNVR--M 368 Query: 335 VEQLALTSEADVRGRTGFESADYPQGRWLREAWE-----------VAQSVPTKAVVEAGF 383 + +L +AD + + ++ V+ G Sbjct: 369 LRELLELKKADALAHAPEHQERAAIAEEVGLVLDDVLKKEAAFDIKDLAIDGTDVIARGV 428 Query: 384 K-GVEIREELTRRRIAAVASWKE 405 G + L A + Sbjct: 429 PAGPSVGAALEAALDAVIDELVN 451 >UniRef50_D1PZ77 PolyA polymerase n=1 Tax=Prevotella bergensis DSM 17361 RepID=D1PZ77_9BACT Length = 509 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 109/449 (24%), Positives = 175/449 (38%), Gaps = 75/449 (16%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFL---------H 51 M+ Y+VGG VRD L P D D VVVGS + G+ Sbjct: 32 MECYVVGGYVRDLFLQRPSDDIDVVVVGSGIEVATKLRQLLGGKAHLTVFRNFGTAQVKF 91 Query: 52 PQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEII 107 E+ AR E S D TLEDD RRD TINA+A N GE++ Sbjct: 92 RGIEVEFVGARKESYSHDSRKPHV----EDGTLEDDQNRRDFTINAMAVCLNRERFGELV 147 Query: 108 DPYNGLGDLQNRLLRHVSPA---FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 DP++GL D+++ ++R F +DPLR++R RFA + L F I DET + Sbjct: 148 DPFDGLADMEDGIIRTPLDPDITFSDDPLRMMRCVRFATQ---LKFYIEDETFEALER-- 202 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHP 224 +A ++ ++ ER+ E + + P F L+ CG L ++ PE+ AL V Sbjct: 203 NAERIKIISGERINTELNKIMLSDQPSRGFVDLQRCGLLALILPELTALDVVETKNGRAH 262 Query: 225 EIDTGIHTLMTLSMA---------------------------------AMLSPQVDVRFA 251 + + HTL + + + Q+ +R+ Sbjct: 263 K-NNFYHTLEVVDNLCQAQQQRMERINKELAQHAPDSKEAQDLQADLEHLQANQLWLRWG 321 Query: 252 TLCHDLGKGLT---PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR-DLARLVAEFHDL 307 TL HD+GK T H H G K+V + +RL++P + + + + + H Sbjct: 322 TLLHDVGKTKTKRWDHAAGWTFHNHNYVGSKMVPGIFRRLKLPMDAKMKYVQKLVDLHMR 381 Query: 308 IHTF--PMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLRE 365 + + +L + V+ L + EAD+ + + + + L Sbjct: 382 PIAIADEDVTDSAVRRLVNDAGN-----DVDDLMMLCEADITSKNRVKKQRFLENFRL-- 434 Query: 366 AWEVAQSVPTKAV---VEAGFKGVEIREE 391 E + K ++ G EI + Sbjct: 435 VREKIADLRKKDFVRELQPCIDGNEIMQM 463 >UniRef50_B6BWF7 CCA-adding enzyme n=1 Tax=beta proteobacterium KB13 RepID=B6BWF7_9PROT Length = 365 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 131/410 (31%), Positives = 209/410 (50%), Gaps = 53/410 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIYLVGGAVRD +L P ++D+VVVGSTP+EM++ ++ VG+ FPVFLHP THEEYAL Sbjct: 1 MKIYLVGGAVRDEILNQPYTEKDYVVVGSTPEEMIEKKFKPVGKSFPVFLHPDTHEEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTE+K+G GY F Y +P ++LE+DL RRDLTINA+A+DD + IDP+NG+ D+ ++ Sbjct: 61 ARTEKKNGVGYKDFIFYTSPTISLEEDLVRRDLTINAIAKDDQNKYIDPFNGINDISKKI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHVS AF EDPLR+LR+ARF A+ F+IA+ETL L++ M + GEL++L+ +R+ E Sbjct: 121 LRHVSDAFKEDPLRILRLARFKAKLP--DFKIAEETLVLLKTMINEGELKYLSYDRIIIE 178 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPE-----IDALFGVPAPAKWHPEIDTGIHTLMT 235 + + +FF+ L D GA+ +F + F + + Sbjct: 179 IKKVFQLKEGHIFFKTLEDIGAIDQIFENNNKRKLSECFQSFFKHGHYFKNFNLCWLFFQ 238 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 S Q V F+ D+ K +L++ L Sbjct: 239 EKFNFKFSKQYSVNFSKKDLDINKTFK----------------ELIKDLL---------- 272 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR-GRTGFES 354 F L+ + + + + + K +++++ D+ + Sbjct: 273 --------------NFRNLSSADQLFVLNRVGFFSKDDKLDKILELIRLDLLIDQNDLNI 318 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWK 404 + L ++ Q + + + G +I E + ++R+ + S++ Sbjct: 319 SLLTYHDKLENFFKNKQ-IN----IPSNLTGKDIAEHIKKQRLNFLESFQ 363 >UniRef50_D1Y2S7 Multifunctional CCA protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y2S7_9BACT Length = 414 Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 142/372 (38%), Positives = 192/372 (51%), Gaps = 13/372 (3%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG-YQQVGRDFPVFLHPQTHE--EY 58 ++Y+VGG VRD L+G P +DRD+VV G + + VGR FPV+L E Sbjct: 16 QLYVVGGWVRDRLIGRPAEDRDYVVCGLDAATLEREFQVRAVGRQFPVYLLEVGGRLSEV 75 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQ 117 ALARTERK+G+GY GF +PD T+E+DL RRD +N++A GE+IDP+ G D++ Sbjct: 76 ALARTERKTGTGYRGFEARFSPDTTIEEDLYRRDTRMNSMAVRLPGGELIDPFGGRADIE 135 Query: 118 NRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R++ S F +DP+ R R A + A LGF IA T+ LM LE ERV Sbjct: 136 RRVISATSEHFRDDPV---RALRAARQAAQLGFSIAPGTVRLMSACREELALE--PTERV 190 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 + E AL + P++FF LRD G L +FPE+ AL GV PAK+H +D H+L L Sbjct: 191 FAEMRKALASPRPELFFIALRDAGILDAVFPELTALDGVEQPAKYHRGLDAFEHSLEVLR 250 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 A L+P+ RFA L HDLGKGLTP + WP H GH G+ +E+L +R+ +P Sbjct: 251 RTAALTPRAATRFAALVHDLGKGLTPRQEWPHHIGHEERGLAALERLDRRMTLPRPWYHF 310 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY 357 AR V H + P IV + + ++A AD F Sbjct: 311 ARFVIANHMRLPRL--RRPGAIVAVIGEMRH--GGFDAAEVAAVIRADHGDLPDFLRRYD 366 Query: 358 PQGRWLREAWEV 369 L E Sbjct: 367 LYVAVLDEERAR 378 >UniRef50_C4G3Z5 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G3Z5_ABIDE Length = 403 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 91/408 (22%), Positives = 157/408 (38%), Gaps = 53/408 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYA 59 + Y VGG VRD++L +D D + + P+E+ + G E Y Sbjct: 22 EAYAVGGCVRDSILDRIPEDWD-ITTSAKPEEVKKLFPATIDTGLQHGTVTVVIEKEGYE 80 Query: 60 LARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + T R G G A +L +DLKRRD TINA+A + +ID ++G DL++ Sbjct: 81 V-TTFRLDGDYSDGRHPDRVAFTSSLTEDLKRRDFTINAMAYSEITGLIDRFDGEKDLED 139 Query: 119 RLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 ++R V F ED LR+LR RFA + L F IA++T ++++ + + ++ E Sbjct: 140 GIIRAVGDAEERFSEDALRMLRAIRFAGQ---LNFDIAEKTFDAIKKL--SPNISKVSVE 194 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ KE E L + NP + ++ + G V+ PEI AL ++ + Sbjct: 195 RIAKELEKLLLSGNP-EYIGLVYEAGIFEVIAPEIAAL--FDKGEIYNSIKAVSCTSYPE 251 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 + + + G +L +R ++ N+ Sbjct: 252 KKELYQIRTALFL-------------------------ERLGADSAAKLLKRFKLDNDTI 286 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 + + + L+ + + + P E + D S Sbjct: 287 NTVKKLIG---LLQREVEASALEMRRTVKEAGHKIMPLLFEARRAKALTDS-------SK 336 Query: 356 DYPQGRWLREAWEVA-QSVPTKAVVEAGF-KGVEIREELTRRRIAAVA 401 Y E ++A V K ++EAG KG+ I + L R + Sbjct: 337 LYENLLVRGECTDIAGLKVNGKDLMEAGIPKGIMIGQTLERLLELVIE 384 >UniRef50_A4XLP3 tRNA adenylyltransferase n=2 Tax=Clostridia RepID=A4XLP3_CALS8 Length = 394 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 84/398 (21%), Positives = 149/398 (37%), Gaps = 59/398 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 K YLVGG +RD LLG +D D + + P++++ + + G + + Sbjct: 20 FKAYLVGGCLRDYLLGTTPQDFD-IATDAKPEDVMKLFEKTIPTGIKHGTVTVIINNVKI 78 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + T R +L +DLKRRD TINALA + +ID +NGL DL+N Sbjct: 79 EV-TTFRIEKEYQNHRWPTVEFTDSLYEDLKRRDFTINALAYHPDEGLIDYFNGLDDLKN 137 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +++R V F ED LR+LR RFA + L F I ++T + + L+ ++ E Sbjct: 138 KIVRCVGNPHERFFEDALRILRCIRFATQ---LNFSIDEKTFEGV--VLLKDLLKKISKE 192 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E L ++N ++L + G + PE ++ ++ + Sbjct: 193 RINAELSKILRSKNSLYGIKLLYESGVGETVIPEYIKIYSFLHSTEFDLILSEFK----- 247 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 F D K VE + + LR + Sbjct: 248 -----------IPAFFACFRDPKK---------------------VEDIMRDLRFDKKNI 275 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 LA + + + + L K + + P+ + + D +T E Sbjct: 276 ILATKLCNYLNSEYATEYLVKKVY------FEEEKMPEGIISTLSILKKD---KTLMELF 326 Query: 356 DYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELT 393 + + + + + +++ G KG E+ L Sbjct: 327 STLKAQN-KLVSKKDVKIKGDDLLKLGLKGKELGNVLQ 363 >UniRef50_B1ZUE5 Polynucleotide adenylyltransferase region n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZUE5_OPITP Length = 463 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 135/436 (30%), Positives = 179/436 (41%), Gaps = 49/436 (11%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY-----QQVGRDFPVFLHP----QT 54 LVGG VRD LLGL KD D V G+ + + A VGR F V Sbjct: 12 RLVGGGVRDWLLGLEAKDFDVEVAGADFETLQRALAPFGATDVVGRSFGVIKVRSAASGA 71 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGL 113 +++L R E K+G+G+ GF P ++ D RRD TINA+A D GE+IDP++G Sbjct: 72 EYDFSLPRRESKTGAGHRGFAVAPDPQLSDADAAARRDFTINAIACDPFTGELIDPHHGQ 131 Query: 114 GDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 DL R+LRH S AF EDPLRVLR + AAR+ ++A ET AL R + A L Sbjct: 132 RDLGARVLRHTSAAFVEDPLRVLRAFQLAARF---DLQLAPETAALCRTI--ADTYGELP 186 Query: 174 PERVWKETES-ALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 ERVW E E A P VL LR FPE+ L G P WHPE D HT Sbjct: 187 VERVWAEWEKWATKAAKPSRGLDVLEQTDWLRH-FPEVARLRGTPQEPAWHPEGDVFTHT 245 Query: 233 LMTLSMAAMLSPQ--------VDVRFATLCHDLGKGLTPPELWPR------HHGHGPAGV 278 + A + + A L HD GK T R GH PAG Sbjct: 246 QHCVDALAANAEWQSSDPARRRLLMLAVLAHDFGKPSTTVRGEKRGAIRWISPGHEPAGG 305 Query: 279 KLVEQLCQRLRVPNEI----RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR 334 + ++ +R+ P E+ L H + + +L + P Sbjct: 306 PIAKEFLRRIGAPLELDPPVCALVVHHLVHHHGAGGEDNYSDSQVRRLARKL----APAT 361 Query: 335 VEQLALTSEADVRGRTGFESAD---------YPQGRWLREAWEVAQSVPTKAVVEAGFKG 385 ++ LAL AD GR ES + E V + ++ G+ Sbjct: 362 IDDLALVMIADSNGRPPLESPETIALIGELRAKAQALALERAAPKPLVGGRHLIALGYAP 421 Query: 386 -VEIREELTRRRIAAV 400 + L A + Sbjct: 422 SPAFKPVLDAAFEAQL 437 >UniRef50_C4Z1D8 tRNA nucleotidyltransferase (CCA-adding enzyme) n=2 Tax=Bacteria RepID=C4Z1D8_EUBE2 Length = 417 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 88/412 (21%), Positives = 143/412 (34%), Gaps = 60/412 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 K Y VGG +RD++LG D D + + P ++ + V G Y Sbjct: 25 FKAYAVGGCIRDSILGRNPDDWD-ITTSAVPSQIKTFFKRTVDTGIAHGTVTIMIDKTGY 83 Query: 59 ALARTERKSGSGYTGFTCYAAPDVT-LEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 + T R G G + L DDL RRD TINA+A +D +D +NGL DL Sbjct: 84 EV-TTYRIDGEYEDGRHPKSVEFSDRLVDDLCRRDFTINAMAYNDTDGFVDEFNGLDDLD 142 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +++R V F ED LR++R RF+A+ LGF I + T ++++ A + ++ Sbjct: 143 AKIIRCVGEPELRFTEDALRMMRAIRFSAQ---LGFTIDEATWNAIKKL--APSISKISM 197 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ERV E L + +P + + G + P ID K + T HT Sbjct: 198 ERVHVELGKTLMSAHPD-YVAQYSEAGLFEPILPVIDNSLKSRYKRKI---LATLQHT-- 251 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + +R+A L + + + L++ N+ Sbjct: 252 --------PDNIYLRYAALF-------------------IASTPDEAAKTLRALKLDNKT 284 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 D + + + + P E + +A Sbjct: 285 VDTVSKLVKLS---KIDIEETEPAVRTALNQYGRDFLPLWHELMMAVIQASEDITGISNP 341 Query: 355 ADYPQGRWLREAWE-----------VAQSVPTKAVVEAGFKGVEIREELTRR 395 A L+ A + ++E G +G EI E L Sbjct: 342 AKVKHLLTLKRLGTDILARGDCFTIKALDISGNDLIEYGLQGHEIGETLKSL 393 >UniRef50_B2S2L8 Polynucleotide adenylyltransferase n=2 Tax=Treponema pallidum RepID=B2S2L8_TREPS Length = 478 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 97/434 (22%), Positives = 145/434 (33%), Gaps = 50/434 (11%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG----RDFPVFLHPQTHEEY 58 IY+VGGAVRD LL D D + P+ + + V L E Sbjct: 24 IYVVGGAVRDFLLNRSAHDWDL-ATDAPPERVRMLFRRTVPTGIEHGTVTILFRGHSIEC 82 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQ 117 R E +EDDL RRD T+NA A +GEIID G DL+ Sbjct: 83 TTFRVESDYSDRRHPD--SVCFAARIEDDLARRDFTVNAFAAALPSGEIIDVCGGYADLR 140 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 N L+ V F ED LR LR RFAA+ L F I T + + ++ Sbjct: 141 NGLICSVGDAHARFSEDALRPLRAVRFAAQ---LSFSIEARTREAI--IALRAHTARISR 195 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH----------P 224 ERV E L T P + +++ + G L LFP + + G + Sbjct: 196 ERVRDELSKMLCTPRPSIALRLMEETGLLHTLFPALAQVCGRNEGEEKETQDSLQVSPQQ 255 Query: 225 EIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT-PPELWPRHHGHGPAGVKLVEQ 283 D + + ++ VR A L L T P P + + Sbjct: 256 RRDARTFAACAFAACDRVPAELAVRLAALLFPLAHYRTLPASGTGAALFICPPALAEARE 315 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKL--------FDSIDAWRKPQRV 335 L + L+ PN + + H + T+ + +S+ R+ Sbjct: 316 LLRGLKYPNYLTAQVCHLVA-HARFTPHECWSEGTLRRFVVTVGTTQLESLCVLRRAYLA 374 Query: 336 EQLALT-------SEADVRGRTGFESADYPQGRWLREAWEVA------QSVPTKAVVEAG 382 + E G+ E + R R A ++ +V + ++ G Sbjct: 375 DDDYRISAQPGVSCENAREGKKMQEQFEIFVTRVRRVAAQLPVHGIRDLAVNGRDLIAQG 434 Query: 383 F-KGVEIREELTRR 395 G I L Sbjct: 435 IPPGPTIGHILNAL 448 >UniRef50_B8HHS6 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Arthrobacter chlorophenolicus A6 RepID=B8HHS6_ARTCA Length = 557 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 114/414 (27%), Positives = 170/414 (41%), Gaps = 36/414 (8%) Query: 5 LVGGAVRDALLGLP------VKDRDWVVVGSTPQEMLDAGY---QQVGRDFPVF--LHPQ 53 +VGGAVRD LL L D D V G + +E+ A + G+ F VF Sbjct: 63 IVGGAVRDGLLSLTQGGTVDSMDVDIEVYGLSKEEVRKALPGDVNEFGQSFGVFNTSLNG 122 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNG 112 + AL R + K+G G+ GF P++ E RRD T+NA+ D ++GE++DP G Sbjct: 123 QDFDVALPRQDNKTGDGHRGFVVDTDPNMPFEVAFARRDFTMNAMGWDAESGELVDPLGG 182 Query: 113 LGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 DL+ +LRH F EDPLRVLR +FA R+ +A ET L REM A + Sbjct: 183 RADLEAGILRHTGDKFQEDPLRVLRGVQFAGRF---NMELAPETAELCREM--APTFHQM 237 Query: 173 TPERVWKETESALTTR-NPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 + +WK+ T + + L G FP + A GVP WHPE +H Sbjct: 238 HKDGIWKQFRKLSTEGTHISKALEALHASG-WEQHFPGLAATRGVPQDLTWHPEGPVHVH 296 Query: 232 TLMTLSMAAMLSPQ--------VDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKL 280 M AA ++ + + A + HD GK GH GV Sbjct: 297 LGMAGDQAARIARRDGLDEEETSILVLAAISHDFGKAHSTKIDENGRITSGGHHETGVAP 356 Query: 281 VEQLCQRLRVPNEIRDLARLVAEFHD--LIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQL 338 + +R+ P + + H ++ + +L +D ++Q Sbjct: 357 AKDFLERIGAPQRFHEKILPLIREHMCHNPGGEATVSDSAVRRLLRRLDNAGGGPTLKQW 416 Query: 339 ALTSEADVRGRTGFESADYPQGRWLREAWEVAQSV-PTKAVVEAGFKGVEIREE 391 + EAD GR ++ + +A + KAV +A KG + E Sbjct: 417 SQLVEADKAGRGAGARR---SRNYVPDWLAIADRIGNEKAVGKAMLKGHHLAEA 467 >UniRef50_UPI00016C045F putative poly(A) polymerase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C045F Length = 409 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 82/407 (20%), Positives = 151/407 (37%), Gaps = 51/407 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHE 56 Y+VGG VRD ++ D D + + P ++ + + + + H Sbjct: 19 FSAYVVGGCVRDMIMKRTPNDWD-ITTSALPADIKKIFERTYDTGIAHGTVTVILNKEHY 77 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E R E++ + A + DL RRD T+NA+A + +DPY G D+ Sbjct: 78 EVTTYRIEKEYVNFRRPNGVEFAE--NIAQDLSRRDFTMNAIAYHPHKGFVDPYGGRKDI 135 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +N+++R V F ED LR+LR RFAA+ L F IA+ET + L++++ Sbjct: 136 ENKIIRAVGDAKIRFNEDALRILRAVRFAAQ---LNFEIAEETKTAF--IDKRELLKYIS 190 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E + N + L + EI LF ++T + Sbjct: 191 KERIRDEFNKICLSENLFFILN-IYKWDILSYISGEIKKLFD---------NLETEQKLV 240 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 L + A + + R+ L + L V+ + + L+ N+ Sbjct: 241 QLLEVMAAMPVNLISRYTALLYPLND------------------SDAVKHILRELKFDNQ 282 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 L E++ + T ++ + +L + R L ++A + Sbjct: 283 TIKNVALAIEYY-IYETNFKIDAVEMKRLLRICEVDN--VRNILLIKKNKASTIEEIEYI 339 Query: 354 SADYPQGRWLREAWE----VAQSVPTKAVVEAGF-KGVEIREELTRR 395 + + E E ++ V++ G EI ++L + Sbjct: 340 EKLFLLIDHILEQKECYKIKDLAITGNDVIKQNIASGKEIGKKLEQA 386 >UniRef50_A4T0E4 Polynucleotide adenylyltransferase region n=2 Tax=Polynucleobacter necessarius RepID=A4T0E4_POLSQ Length = 376 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 142/351 (40%), Positives = 193/351 (54%), Gaps = 40/351 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MKIY VGGA+RD L+ LPV D D+VVVGS+ +EM+ G++ VG+DFPVFLHP T EYAL Sbjct: 1 MKIYAVGGAIRDTLMSLPVHDIDYVVVGSSVEEMVAKGFRPVGKDFPVFLHPDTQAEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALA--QDDNGE----IIDPYNGLG 114 ARTERK+G GY GF YA P VTLE DL+RRDLTINA+A +G I+DPYNG Sbjct: 61 ARTERKTGKGYKGFHFYADPSVTLEQDLERRDLTINAMAQEVGLDGTWIGPILDPYNGQE 120 Query: 115 DLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 DL ++ RHVS AF EDPLR+LR+ARFAAR+ F +ADET+ ++ + +GEL L+ Sbjct: 121 DLAAKVFRHVSDAFAEDPLRLLRIARFAARFPE--FSVADETMIALKAIVQSGELAALSA 178 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+W+E +T P FQVL + GA + P L A + E+ Sbjct: 179 ERIWQELARGMTAAKPMHMFQVLLNTGAAKTFLP--ATLTNQLAQEVFREEL-------- 228 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 +S ++ ++ R A L + +R+P E+ Sbjct: 229 -ISHYELVGNYLEERCAVTLMRL-------------------PSSEIRSWADCVRMPTEV 268 Query: 295 RDLARLVAEFHDLIHTFP--MLNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 RD + + +E + LI ++ F+ D WRKP R + L +E Sbjct: 269 RDFSEIFSELNTLILKTTEGKFQAVDVLAWFNRADVWRKPDRGQALLRLAE 319 >UniRef50_A1UTI1 TRNA-nucleotidyltransferase n=4 Tax=Rhizobiales RepID=A1UTI1_BARBK Length = 417 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 100/415 (24%), Positives = 163/415 (39%), Gaps = 57/415 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT----HEE 57 + +VGGAVR+ LLG P+ D D PQ+++ + + P + T E Sbjct: 31 EARVVGGAVRNQLLGQPISDIDIATT-CLPQQVIKRVEEAGFKAVPTGIDFGTVTVVSES 89 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 + T +S G A + D +RRD TINAL D G++ D GL D+ Sbjct: 90 CSYEVTTLRSDVETDGRYAKVAFGRDWKKDAERRDFTINALYCDATGQLYDLVGGLSDIA 149 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +R +R + ED LR+LR RF A Y + L + L L+ Sbjct: 150 SRTIRFIGVAEQRICEDYLRILRFFRFFAWYGAGR----PDAQGLKACVALKHGLHKLSS 205 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ERVW+E + L +P +R G L ++FPE + +G+ A IH+L+ Sbjct: 206 ERVWEEIKKLLAASDPTRALLWMRQSGILTLIFPETEK-WGIDA-----------IHSLV 253 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 +R + L PP+ + ++ + +RLR N+ Sbjct: 254 KTEHVLGWKEDPLLRL--------QSLLPPD------------SERLQDIARRLRFSNKE 293 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG-----R 349 + + E+ +L + + KL I + ++ L+L+ A G Sbjct: 294 K---TRLREWAELESISQNCSETCLQKL---IYFHGRQPILDHLSLSLAAVCAGPVEGNE 347 Query: 350 TGFESADYPQGRWLREAWE-VAQSVPTKAVVEAGF-KGVEIREELTRRRIAAVAS 402 + Y + L + WE V K ++E GF KG + ++L V S Sbjct: 348 NSQKIEHYMRLYQLAQRWEIPVFPVSGKDLIERGFAKGKIVGQKLKELETIWVES 402 >UniRef50_UPI000197324F tRNA nucleotidyltransferase/poly(A) polymerase family protein n=2 Tax=Clostridium RepID=UPI000197324F Length = 430 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 98/403 (24%), Positives = 160/403 (39%), Gaps = 53/403 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYA 59 + + VGG VRD +L D D + + P E+ + V G + H Y Sbjct: 30 EAFAVGGCVRDTILNRIPGDWD-ITTSAKPVEVKAVFGKTVDTGLQHGTVTVIRDHVGYE 88 Query: 60 LARTERKSGSGYTGFTC-YAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + T R G G L +DL+RRD TINA+A ++D + G+ DL+N Sbjct: 89 I-TTYRIDGEYEDGRHPREVEFTSDLREDLRRRDFTINAMAYSPETGLVDIFGGMEDLKN 147 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 R +R V FGED LR++R RFA++ L F I +ET + + A L H++ E Sbjct: 148 RTIRCVGNAVERFGEDALRIMRAVRFASQ---LDFSIEEETYRALSGI--APNLAHVSKE 202 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E L + P V+ D G + P + A F P + ++GI+ Sbjct: 203 RIQVELTKTLLSGRP-QGVLVMEDTG----MCPYMTAGF----PGIFSKARESGINLEER 253 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 L +A+L + +R+A GH G K + + L++ N+ Sbjct: 254 LKRSALLPQEKSLRYAV-----------------FLGH--LGEKGACTILRELKLDNDTI 294 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 + + F + T P P + + + + L L + + Sbjct: 295 RRVKTLVRFME--ETLPEDGPA-----LRRMMSQMEDSLFDSLLLMRKTVFPEQMEDVLK 347 Query: 356 DYPQGRWLREAWE----VAQSVPTKAVVEAGFK-GVEIREELT 393 + R +RE + +V ++ AG K G E+ E L Sbjct: 348 TESRCRRVRERGDCIRLKDLAVTGNDLIAAGMKPGKEMGERLR 390 >UniRef50_B8FBG8 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FBG8_DESAA Length = 472 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 105/461 (22%), Positives = 169/461 (36%), Gaps = 73/461 (15%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALAR 62 +YLVGG+VRD +LG P+KD D + E+ + F + + R Sbjct: 19 LYLVGGSVRDFVLGRPMKDIDLACPNAR--ELAKKLAKANNAAF---VPMEKDPAAPCFR 73 Query: 63 TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN--------GEIIDPYNGLG 114 +S + DL RD TINA+A D G I+DP+NGL Sbjct: 74 VVNRSDP-TDFLDVVRFRGPDIHTDLADRDFTINAMALDLENGFPQDPMGAILDPFNGLD 132 Query: 115 DLQNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 D++ +++R + +DPLR+LR RFA++ LGF I ++TLA RE+ A +LE Sbjct: 133 DIRKQIIRSLGRKNLKDDPLRILRAFRFASQ---LGFEIEEKTLADCREL--APQLERTA 187 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E +A N + + G L +FP+I + H + H+L Sbjct: 188 AERITHELITAFEAENSYSVVRKMWKAGVLLPIFPDIAPMEACQQDGFHHH--NVWEHSL 245 Query: 234 MTLSMAAML----------------------SPQVDVRFATLCHDLGKGLT----PPELW 267 + ++ + L HD+GK T + Sbjct: 246 DVYEALEGVLGGLDALFGEYAPQVRECLEAGRTVPMLKLSALLHDIGKPYTGRYDEAKGR 305 Query: 268 PRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPML--NPKTIVKLFDS 325 GH G L + RLR+ N+ D L+ H + KT + + Sbjct: 306 TTFFGHAKKGEALARKALGRLRLTNKDMDFVCLLVSEHRHVEQLAQPVVKHKTRMAWYRK 365 Query: 326 IDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWE--------------VAQ 371 + + A+ + AD + G + + R + E Sbjct: 366 MGDFSV-----ACAVLAMADNLSKQGRMCTETERSRREKHLMEMVREYFAEAKGALARPL 420 Query: 372 SVPTKAVVEAGF-KGVEIREELT---RRRIAAVASWKEQRC 408 + ++E G KG + + L + A KEQ Sbjct: 421 LINGNDLLEIGLPKGPGLGKVLKAVTAAQDAGQVKTKEQAL 461 >UniRef50_Q4JSD7 TRNA nucleotidyltransferase n=4 Tax=Actinomycetales RepID=Q4JSD7_CORJK Length = 547 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 103/478 (21%), Positives = 166/478 (34%), Gaps = 90/478 (18%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDA---GYQQV---GRDFPVF--LHPQT 54 +YLVGG+VRDALLG D D+ + PQ ++D + V G ++ L Sbjct: 79 LYLVGGSVRDALLGRLSHDLDF-TTDARPQAIVDIVTPLAETVWDTGIEYGTVSALVKGQ 137 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ----DDNGEIIDPY 110 E R ++ G + +L+ DL RRD NA+A D N ++ DP Sbjct: 138 ILEITTFRADQYDGQSRNP---EVSFGDSLDGDLIRRDFRANAIALELSPDGNHQLRDPL 194 Query: 111 NGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 GL DLQ +L +F +DPLR+LR RF ++ L F + M M+ Sbjct: 195 GGLEDLQAGVLDTPDSPEISFNDDPLRMLRACRFVSQ---LEFGVTKRVKEAMAAMSEQ- 250 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 + +T ERV E + P V ++ + G + PE+ AL + H D Sbjct: 251 -ISRITVERVAVELNKLMLGAAPWVGLDLMVETGLADHVLPELPALKLTQDEHRQHK--D 307 Query: 228 TGIHTLMTLSMA------AMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGV 278 H+L L A L P +++R A L HD+GK T H H G Sbjct: 308 VYWHSLKVLRNAVNLEAERGLEPSLELRMAALLHDIGKPDTRAFTESGAVTFHQHEVVGA 367 Query: 279 KLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPM-----------------------LN 315 ++ + ++L+ + + H H + Sbjct: 368 RITRRRLRKLKYSKQHVQDIGQLVFLHMRFHGYADTQGKGQNQDARRGAGEKDNNESTWT 427 Query: 316 PKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE-----------SADYPQGRWLR 364 + + + L AD R + Q + Sbjct: 428 DSAVRRYVNDAGELLPLLH-----LLVRADCTTRNQRKAQRLQRTYDNLEKRIEQLQEQE 482 Query: 365 EAWEVAQSVPTKAVVE-AGFK-GVEIREE---LTRRR-----------IAAVASWKEQ 406 + V + +++ K G ++ + L R IAA+ W + Sbjct: 483 DLAAVRPDLDGNEIMQILDLKPGPDVGKAWAYLKELRLDRGPMEREDAIAALKQWWGE 540 >UniRef50_A0Q8A2 CCA-adding enzyme n=18 Tax=Francisella RepID=CCA_FRATN Length = 369 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 136/382 (35%), Positives = 201/382 (52%), Gaps = 17/382 (4%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 MK YLVGGAVRD LLG+ KD+DWVVVG+T EML G+ ++ +FPVF+HPQT +EYAL Sbjct: 1 MKFYLVGGAVRDMLLGITPKDKDWVVVGATEDEMLANGFIKIAANFPVFIHPQTKQEYAL 60 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 AR+E+K+ +GY GF + +TLEDDLKRRDLTIN++A D N ++IDP+NG DLQNR+ Sbjct: 61 ARSEKKTANGYHGFEVNFSKYITLEDDLKRRDLTINSIAIDQNNKVIDPFNGQADLQNRI 120 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRH S AF EDPLRV+R+ARF A+ ++ F IA+ETL L++E+ GEL HLT ER+ E Sbjct: 121 LRHTSIAFIEDPLRVVRLARFKAQLSNFNFSIAEETLTLIKELIKTGELNHLTRERLHIE 180 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 AL NP++FF L + AL+++FP I + + + + Sbjct: 181 FVKAL--NNPKIFFTTLEELEALKIIFPNISCILLLIPNKSFFEN--------PIYKDSN 230 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + L L +H+ A + + + L R N + Sbjct: 231 INEKITLCLLKVPQQKLDDIRKELLLTNKHYKLLKASIAISKILEDR----NITAEEIFQ 286 Query: 301 VAEFHDLIHTFPMLNPK-TIVKLFDSIDAWRKPQRVEQLALTSEADVR--GRTGFESADY 357 + + ++I + + K + + P R QL T+ ++ Sbjct: 287 LIKNANIIRDKNLFAESLNLYKKYLKVCDTITPHRNYQLLQTTINTIKNASINSLTIETI 346 Query: 358 PQGRWLREAWEVAQSVPTKAVV 379 P+ + ++ + K + Sbjct: 347 PKDKLRNTLKQLYIDIIKKQLK 368 >UniRef50_Q4K5Y6 Poly(A) polymerase n=49 Tax=cellular organisms RepID=Q4K5Y6_PSEF5 Length = 555 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 93/397 (23%), Positives = 150/397 (37%), Gaps = 35/397 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEML--DAGYQQVGRDFPVFLHP--QTHEE 57 + YLVGG VRD LL + KD D V +TP+++ + +GR F + + E Sbjct: 147 QAYLVGGCVRDMLLNITPKDFD-VATSATPEQVKAEFRNARIIGRRFKLVHIHFGREIIE 205 Query: 58 YALARTE----------RKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEI 106 A R +S +G TLE+D +RRD TINAL D + I Sbjct: 206 VATFRANHPQNEDDEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERI 265 Query: 107 IDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREM 163 +D NG+ D++N L+R + + EDP+R+LR RFAA+ L F I T A +RE+ Sbjct: 266 LDYANGVHDIRNNLIRLIGDPRQRYQEDPVRMLRAVRFAAK---LNFGIEKHTAAPIREL 322 Query: 164 THAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH 223 A L + R+++E + F++L D LFP + + + Sbjct: 323 --APMLREIPSARLFEEVLKLFLSGYAADTFEMLVDLQLFDPLFP--ASAEALEYNPTYT 378 Query: 224 PEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKL 280 + + L + FA L P A +L Sbjct: 379 HTLISEALVNTDLRIKQNKPVTPAFLFAALLWPALPARVLRLQERGMPPIPAMQEAAHEL 438 Query: 281 VEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLAL 340 + + CQR+ +P R + + + + + +D R + L L Sbjct: 439 IAEQCQRIAIPKRFTMPIREIWDMQERLPRRSGKRADQL------LDNPRFRAGYDFLLL 492 Query: 341 TSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKA 377 A + E Q E ++ + + K Sbjct: 493 RESAGEQTDGLGEWWTDYQDANDAERRDMIRDLSGKE 529 >UniRef50_A8YV39 CCA-adding enzyme n=19 Tax=Lactobacillus RepID=CCA_LACH4 Length = 399 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 86/413 (20%), Positives = 157/413 (38%), Gaps = 61/413 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLH--PQTHE 56 + Y VGG+VRD LL V D D + + P+E+ + + + G Sbjct: 26 FEAYFVGGSVRDLLLDRHVHDVD-ITTSAYPEEVKELFAKSIDTGIRHGTVTVLYGGESY 84 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE L++DLKRRD TINALA D +G+I+D +NG+ DL Sbjct: 85 EITTFRTESGYQDYRRPDHVTFVQ--NLDEDLKRRDFTINALAMDLHGQIVDLFNGVEDL 142 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +N ++R V F ED LR++R RF ++ L F + ++T +++ + L+ ++ Sbjct: 143 KNHIIRAVGDPEKRFHEDALRMMRAVRFTSQ---LKFNLEEKTEQAIKD--NHELLKKIS 197 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ +E + + FQ+ D + P+ + T +L Sbjct: 198 VERIREEFVKMGIGPHSRQAFQIFLDTQLSEDV-PDFAGKKELLQIYPQLQFSPTLETSL 256 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 +L + + P + + + + + N Sbjct: 257 WSLIIILLKLPD---------------------------------EDISKFMRDWKNSNA 283 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 + + + +F DLI + +LF + R + A + G+ Sbjct: 284 MTEQVERIIKFFDLISDHTPND----YELFQA--GERTIINTIDV-----AHILGQPVAS 332 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVASWKE 405 A + L ++ + +++ G + G E+ L + R V+S E Sbjct: 333 EALVDRYLALPIKKPAELAIDGRFLIKHGMRPGAELGHTLNKIRELVVSSRLE 385 >UniRef50_Q7U391 CCA-adding enzyme n=5 Tax=Bordetella RepID=CCA_BORBR Length = 364 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 159/402 (39%), Positives = 210/402 (52%), Gaps = 54/402 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 +++Y+VGGAVRD LLGLP DRDWVVVG+TP++M G+ VG DFPVFLHP+T EEYAL Sbjct: 12 LQVYIVGGAVRDGLLGLPAGDRDWVVVGATPEDMARRGFIPVGGDFPVFLHPRTKEEYAL 71 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTERKSG GY GFT Y DVTLE DL+RRDLT+NA+A+ GE++DP +G+ D++ R+ Sbjct: 72 ARTERKSGRGYKGFTFYTGADVTLEQDLQRRDLTVNAIARTPQGELVDPLDGVADVRARV 131 Query: 121 LRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 LRHV AF EDP+R+LR+ RFAAR+ F IA ET+ L R M AGE + L PERVWKE Sbjct: 132 LRHVGEAFAEDPVRILRLGRFAARFG--DFSIAPETMQLCRRMVEAGEADALVPERVWKE 189 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 L + P VL GAL + PE+ V A + AA Sbjct: 190 VSRGLMAQAPSRMLDVLARAGALARVMPELHDDAAVRAE----------------IDRAA 233 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + R+A LC TP + L +RLR P E D ARL Sbjct: 234 AAGLPLAGRYALLCRH-----TPER----------------DALGRRLRAPVECMDQARL 272 Query: 301 VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG 360 + D + + L + DA RKP+R + L A + + Sbjct: 273 LPLAVDALAASATP--AAQLDLIERCDALRKPERFDAL--LQAAAIVAPVDLSA------ 322 Query: 361 RWLREAWEVAQSVPTKAVVEAGFKG--VEIREELTRRRIAAV 400 R + +++ A + G I+ L + R+ A+ Sbjct: 323 --WRARVQAVRAIDAGA-IARQCAGDPARIKPALRQARLQAL 361 >UniRef50_UPI00016C46B5 metal dependent phosphohydrolase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C46B5 Length = 410 Score = 260 bits (664), Expect = 9e-68, Method: Composition-based stats. Identities = 92/417 (22%), Positives = 148/417 (35%), Gaps = 61/417 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ--QVGRDFPVFLHPQTHEEY 58 GG VRD LGL +D D V + P+++ + ++G F V + Sbjct: 10 FTALWAGGCVRDEFLGLVPEDYD-VATSARPEQLRPLFRRRNEIGAHFGVVQVIGPKKAD 68 Query: 59 ALART-----ERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNG 112 T R G+ G T E+D +RRD T+N + D E++D G Sbjct: 69 GTWHTIEVASFRSDGAYTDGRRPDTVTFSTPEEDAQRRDFTVNGMFFDPVRNELLDFVGG 128 Query: 113 LGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 DL ++LR + F ED LR+LR AR A R+ G I T ++M A ++ Sbjct: 129 RADLDAKVLRAIGDPFARFTEDKLRILRAARMATRF---GLAIDPTTRDAAQQM--APQV 183 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 ++ ERV +E N +LR+ G + + PE+ P D Sbjct: 184 SVVSAERVAEELRKLFAHPNRTRGLALLRELGLIEPILPELT------------PSADRA 231 Query: 230 IHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLR 289 L LS P + FA H +G+ +T E++ +RL+ Sbjct: 232 SAALAALSEVGGRLP-FPLAFAVTLHAVGRAVT-------------------ERVAERLK 271 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 + N D + ++ ++ P + L ++ L A Sbjct: 272 LSNVESDRLCWLVANQSVLTDAEVMRPSKLKPLLVHPG-------IDDLLALHRALATAT 324 Query: 350 TGFESADYPQGRWLR----EAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVA 401 G + R LR E + ++ G K G + L R A + Sbjct: 325 GGSLAPVEFCTRVLRDTPPEELNPPPVLTGADLIARGLKPGPAFKRLLDAVREAQLE 381 >UniRef50_D1U5B9 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U5B9_9DELT Length = 370 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 126/404 (31%), Positives = 177/404 (43%), Gaps = 42/404 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEY 58 M +YL GGAVRD LLG P+ DRD++V G+T QE D ++VGR FPVFL Sbjct: 1 MNVYLAGGAVRDLLLGRPINDRDYLVTGATRQEFTDRFPNSREVGRTFPVFLL------- 53 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 G +V +E +L+ RDLT+NA+ D++G++I + L DL + Sbjct: 54 -------------DGLEFSFPREVAVEQELRSRDLTVNAMLLDEDGDLICHPDSLDDLHS 100 Query: 119 RLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERV 177 R LR S +F DPLRV R ARF A+ F DE + MR + G L L +RV Sbjct: 101 RTLRPASRQSFLSDPLRVFRAARFWAKLP--DFTPHDELVETMRLVADTGLLAPLPADRV 158 Query: 178 WKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLS 237 +ET AL T +P + ++L G L F E +PA + + D HT + Sbjct: 159 GQETIKALQTASPGNYLRLLGRAGCLEPWFKEFKESMNIPAGPLPYHDTDVLEHTCRVMD 218 Query: 238 MAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDL 297 A V + CHD+GK TP ++ P HH H G + + L +R+R+ N Sbjct: 219 SLAGDGMAVWMGL---CHDIGKTSTPKDILPSHHDHDQRGADMADTLARRIRLSNAHALA 275 Query: 298 ARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADY 357 R A++H + L P T V + + R QL AD E + Sbjct: 276 GRKGAQWHMTAARYRELRPGTKVDMLMDLHLSRVT---RQLFRLVAAD-----QDEDHWH 327 Query: 358 PQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVA 401 LR + + G E L R A+A Sbjct: 328 LAALDLRTVLASRLDETQRNL------GPESGRRLRELRAQALA 365 >UniRef50_A8GIZ2 Poly(A) polymerase n=61 Tax=Gammaproteobacteria RepID=A8GIZ2_SERP5 Length = 505 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 79/344 (22%), Positives = 133/344 (38%), Gaps = 31/344 (9%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFP--VFLHPQTHE 56 + YLVGG VRD LLG KD D + +TP+++ + VGR F + Sbjct: 98 FEAYLVGGGVRDLLLGKKPKDFD-ITTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEII 156 Query: 57 EYALARTE----------RKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGE 105 E A R S G ++E+D +RRD TIN+L + Sbjct: 157 EVATFRGHHEQQTPESDKNSSQQAQNGMLLRDNIFGSIEEDAQRRDFTINSLYYGVADFT 216 Query: 106 IIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMRE 162 + D +GL DL+ ++R + + EDP+R+LR RFAA+ L I+DET + Sbjct: 217 LRDYVDGLRDLKQGVIRLIGDPETRYREDPVRMLRAVRFAAK---LDMTISDETAEPIPR 273 Query: 163 MTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKW 222 + A L + P R+++E+ L + L + + LFP+I F Sbjct: 274 L--ASLLHEIPPARLFEESLKLLQAGYGYPTYLKLCEYQLFQPLFPQIARHFTPGQDTPM 331 Query: 223 HPEI-DTGIHTLMTLSMAAMLSPQVDVRFATLCHDL----GKGLTPPELWPRHHGHGPAG 277 + +T L + FA + + L + A Sbjct: 332 ERILAQVLKNTDYRLQNNMRV--NPAFLFAAMLWYPLLEHAQKLAQESGLAYYDAFALAM 389 Query: 278 VKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK 321 ++++ C+ L +P I L R + + + +++ Sbjct: 390 NDVLDEQCRSLAIPKRITTLVRDIWQLQLRLSRRQGKRAHKLME 433 >UniRef50_Q8RJX5 Polynucleotide adenyltransferase n=1 Tax=Stigmatella aurantiaca RepID=Q8RJX5_STIAU Length = 423 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 99/400 (24%), Positives = 146/400 (36%), Gaps = 55/400 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEY 58 ++LVGG VRD L G+ KD D V + PQE+ A + + G Sbjct: 27 FAVFLVGGCVRDILRGVAPKDFD-VASSALPQEVQGAFKKVIPTGIQHGTVTVVIGGNHV 85 Query: 59 ALARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNG-EIIDPYNGLGDL 116 + T R G G + + DL RRD TINA+A D G E++DP+ G+ DL Sbjct: 86 EV-TTFRSEGDYLDGRRPSSVTFERDITQDLSRRDFTINAMAYDPLGRELVDPFGGMTDL 144 Query: 117 QNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 RL+R V F ED LR LR RFAA LGF + T + + Sbjct: 145 HARLIRCVRSPIERFSEDGLRPLRAVRFAA---VLGFTLDPATRDAIPPTL--PVFRKVA 199 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERV +E L + ++ +L + G L PE+ + A Sbjct: 200 LERVREEFVKLLLSPRAELGLSLLVETGLLEAFLPELSSAGDEAAR-------------- 245 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 M + +V++R A L DL +G + RL+ P + Sbjct: 246 MARAAVQGAPAEVEIRLAALLADLVRGS------------------QARDIALRLKFPTK 287 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 + D L+ E L P + +L + P +E L + + V R Sbjct: 288 VADTVGLLVEHAALEERTEQAEP-ALRRLLAQVG----PALLEPLLAVARSRVEARQPER 342 Query: 354 -SADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL 392 + LR + +K E G +I L Sbjct: 343 LPSVLRLQERLRTLAAAKPPLTSK---ELALTGKDIMAAL 379 >UniRef50_D1VN96 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Frankia sp. EuI1c RepID=D1VN96_9ACTO Length = 517 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 112/456 (24%), Positives = 164/456 (35%), Gaps = 67/456 (14%) Query: 5 LVGGAVRDALLG-----LP-------------------------VKDRDWVVVGSTPQEM 34 LVGG+VRDALLG P D D+ + P+ + Sbjct: 43 LVGGSVRDALLGDLAQARPASSARPAATTPAKPAATTPAKPAGEPPDLDF-TTDARPERV 101 Query: 35 LDA------GYQQVGRDFPVFLHP--QTHEEYALARTERKSGSGYTGFTCYAAPDVTLED 86 L+ + G F T E R E + +LE Sbjct: 102 LEMTRGWAEATWEAGIAFGTVGLARAGTRLEVTTYRAESYDRGSRNP---TVSYGDSLEA 158 Query: 87 DLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFA 142 DL RRD T+NA+A + E +D + G+ DL +LR P + +DPLR+LR RF Sbjct: 159 DLLRRDFTVNAMAVSVPDHEFVDLFGGMADLARGVLRTPGPPEVSLDDDPLRILRAIRFE 218 Query: 143 ARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGA 202 A+ LG E + MR L + PERV E + + +P Q L D GA Sbjct: 219 AK---LGLTPTPELVEAMR--ARVDRLRIVAPERVRDELRKLIVSADPDRGLQRLVDVGA 273 Query: 203 LRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLS---PQVDVRFATLCHDLGK 259 V+ PE+ AL + H D HTL L A L P +R+A L HD+GK Sbjct: 274 AAVVLPELPALR--MEIDEHHQHKDVYTHTLTVLRQAIELEDDGPDEVLRWAALLHDIGK 331 Query: 260 GLTPPE---LWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF--PML 314 T H H G + + LR P ++ D L+ H H + Sbjct: 332 PRTRRHAAGGGVSFHHHEVVGRDMTRKRLAALRFPKDVGDSITLLVFLHLRFHGYGTGEW 391 Query: 315 NPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQG-RWLREAWEVAQSV 373 + + ++E+L +D R ++A + L E + Sbjct: 392 TDAAVRR-----YVHDAGPQLERLHKLVRSDCTTRNKRKAAMLARHYDSLEERIAALAAQ 446 Query: 374 PTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCP 409 + + G +I E L R V ++ Sbjct: 447 EEISAIRPELSGDDIMEVLGLRPSRLVGEARQHMLD 482 >UniRef50_P0ABF3 Poly(A) polymerase n=179 Tax=Gammaproteobacteria RepID=PCNB_ECO57 Length = 465 Score = 257 bits (657), Expect = 6e-67, Method: Composition-based stats. Identities = 79/341 (23%), Positives = 139/341 (40%), Gaps = 29/341 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFP--VFLHPQTHEE 57 + +LVGG VRD LLG KD D V +TP+++ + VGR F + E Sbjct: 61 EAWLVGGGVRDLLLGKKPKDFD-VTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIE 119 Query: 58 YALARTERK--------SGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIID 108 A R + S G G ++E+D +RRD TIN+L + + D Sbjct: 120 VATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRD 179 Query: 109 PYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 G+ DL++ ++R + + EDP+R+LR RFAA+ LG RI+ ET + + Sbjct: 180 YVGGMKDLKDGVIRLIGNPETRYREDPVRMLRAVRFAAK---LGMRISPETAEPIPRL-- 234 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 A L + P R+++E+ L +++L + + LFP I F + Sbjct: 235 ATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERI 294 Query: 226 ID-TGIHTLMTLSMAAMLSPQVDVRFATLCHDL----GKGLTPPELWPRHHGHGPAGVKL 280 I+ +T + + FA + + + H A + Sbjct: 295 IEQVLKNTDTRIHNDMRV--NPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDV 352 Query: 281 VEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK 321 +++ C+ L +P + L R + + + +++ Sbjct: 353 LDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQGKRAWKLLE 393 >UniRef50_C0GPD7 Polynucleotide adenylyltransferase region n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GPD7_9DELT Length = 482 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 108/429 (25%), Positives = 165/429 (38%), Gaps = 43/429 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ--QVGRD--FPV--FLHPQT 54 +VGGAVRD LL PV+D D P E L ++ + GR F +H Sbjct: 48 FTALMVGGAVRDILLERPVRDVDLA--SDMPLESLRKHFRAFETGRSRLFHTLCIVHQGQ 105 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 H E L RT K D + RD TINA+A D+ +++DP++G Sbjct: 106 HLETTLFRT--KHSLPAERPDQEDTKHSLFLQDARHRDFTINAMALDEQLDLLDPFHGKK 163 Query: 115 DLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL L+R V EDPLR+LR AR A L F I ++T + + ++ Sbjct: 164 DLDRGLIRAVENPRERITEDPLRMLRAARLAC---ELDFEIEEKTALSISGLAR--DISD 218 Query: 172 LTPERVWKETESA--LTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 + PER+ +E L+ ++L G L V+ PE+DAL G+ + HPE D Sbjct: 219 VAPERLGREILKMASLSGPRFARGIRLLDRLGLLPVVLPEVDALKGLYHDPRHHPEGDVF 278 Query: 230 IHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLR 289 IHTL + + +++ + GH A ++ Q+ QRLR Sbjct: 279 IHTLRAIQCNDLAHDSLNMALLAHDLGKTDIAARHPGTGFYRGHDRAAEYIIRQMGQRLR 338 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 +P I + VA H +H + P I+++ + LA S D R Sbjct: 339 LPGRITRAMQAVAANHMRMHGLDEMRPSKILEMVEH-------PHWALLARASVCDHAAR 391 Query: 350 TG-----FESADYPQGRWLREAWEVA-----QSVPTKAVV-EAGF-KGVEIREELTR--- 394 + + +R A + V+ AG G + + Sbjct: 392 GKEHGKLQQKKIALALKKIRPLLNEATGKTRPVITGNQVMQAAGIPPGPMVGRIIRETTA 451 Query: 395 -RRIAAVAS 402 R + Sbjct: 452 WARDNGIQD 460 >UniRef50_Q72B04 tRNA nucleotidyltransferase, putative n=4 Tax=Desulfovibrio RepID=Q72B04_DESVH Length = 383 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 119/409 (29%), Positives = 169/409 (41%), Gaps = 41/409 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLD-AGYQQVGRDFPVFLHPQTHEEYA 59 MK YLVGGAVRD L+G ++ D S + ++VG+ V+L Sbjct: 1 MKTYLVGGAVRDILIGRTPREHDIAFEASVAHFLQANPSARKVGKRIDVYLIGNVEH--- 57 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 + DL +RD TINALA + +G + + L DL+ Sbjct: 58 -----------------RPVQGGDIRADLLQRDFTINALALEADGTLHAHPDALADLRAS 100 Query: 120 LLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVW 178 ++R SP A DP+RVLR ARFAA+ +A ETL MR + AG L + E+V Sbjct: 101 IIRPASPGALMADPVRVLRAARFAAQLPE--MSLAQETLEAMRAVAAAGYLAEMPCEQVC 158 Query: 179 KETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSM 238 +ET AL + P+ FF L G L+ F E+ L GVPA + HT+ + Sbjct: 159 RETLKALGSPAPERFFISLAKGGCLQPWFAEVADLTGVPAGPPAYHTGSAFDHTIDIMRR 218 Query: 239 AAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLA 298 A + V + CHDLGKG TP ++ PRH GH G + L QRL + N Sbjct: 219 LAGDAFDVWLGL---CHDLGKGTTPADILPRHLGHEHRGEEAATALGQRLGMSNRFIRGG 275 Query: 299 RLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYP 358 L A H + L P T V L + + + AD +A Sbjct: 276 ALAARMHMKAGRYDTLRPHTRVDLLLVLHH---AGIIRNVWNLVTAD---SGIDHTATAM 329 Query: 359 QGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQR 407 A ++ S+ KG E L + A+A+ + + Sbjct: 330 AELETILAVKLPPSLRG--------KGPESGRMLREMQCMALAARRTEP 370 >UniRef50_Q5E2T5 Poly(A) polymerase I n=6 Tax=Gammaproteobacteria RepID=Q5E2T5_VIBF1 Length = 475 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 78/335 (23%), Positives = 135/335 (40%), Gaps = 28/335 (8%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFP--VFLHPQTHEEY 58 YLVGG VRD LLG KD D + +TP+++ + +GR F L + E Sbjct: 70 AYLVGGGVRDILLGQEPKDFD-IATNATPEQIKKLFRNCRLIGRRFRLAHILFGRDVIEV 128 Query: 59 ALARTERKSGSGYT--------GFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDP 109 A R K + G T+E+D +RRD T+NA+ + + I D Sbjct: 129 ATFRGHHKEDNEKKNISAQSDEGMLLRDNVYGTVEEDAERRDFTVNAMYYNIADYSIHDY 188 Query: 110 YNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 NG+ DL+N ++R + + EDP+R+LR RFAA+ L I D+T A + E+ + Sbjct: 189 ANGIEDLKNGIIRLIGDPETRYREDPVRMLRAVRFAAK---LDMTICDKTAAPIAEL--S 243 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 L + R+++E+ L T N + +LRD + LFP + + I Sbjct: 244 PLLRDIPAARLFEESLKLLQTGNGLNTYWMLRDFNLFQQLFPVLTPFLTEEGNSPAEQMI 303 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCHDL--GKGLTPPELWPRHHGHG---PAGVKLV 281 + + + + + FA + K + P+ + A ++ Sbjct: 304 ELVLRS-TDKRINSGKRVNPAFMFAAMLWYPLTAKAQEIQDDNPKFDHYESIMEASNLIL 362 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNP 316 + + +P + R + + + Sbjct: 363 DTQVRSTAIPRRLTATIRDIWQLQLRLPRRTGKRA 397 >UniRef50_C8P0Q2 tRNA adenylyltransferase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0Q2_ERYRH Length = 443 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 96/415 (23%), Positives = 157/415 (37%), Gaps = 43/415 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ----QVGRDFPV-FLHPQTH 55 ++++VGG VRDAL+G D D + P+++L + G D+ + F+ + H Sbjct: 22 FEVFVVGGFVRDALMGHRSFDIDLC-TNALPEQLLKIYKKYSIESNGHDYGIKFMSGEEH 80 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 E + R E G L DD KRRD T+NAL +ID Y+G+ D Sbjct: 81 FEISTMRLEGDYEDGRRPSRVEFINH--LFDDSKRRDFTVNALYYHPRHGLIDYYDGVKD 138 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 LQN LR + F ED LR+ R+ RF + LGF I ETL +++ + L+ L Sbjct: 139 LQNHTLRVIGDPKVRFKEDVLRIARLYRFKS---ELGFDIDAETLYVVQTQIES--LQRL 193 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 +++ E L L L LFP + G +H E HT Sbjct: 194 KLVQIYPELSRYLLGPYFLET--SLLCPEFLMTLFPPLKETLGFDQHNPFH-EYSLYEHT 250 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGK---GLTPPELWPRHHGHGPAGVKLVEQLCQRLR 289 + T+ + +VD++ L HDLGK + + GH A + + L+ Sbjct: 251 IRTMQ---GIPNRVDLKLVALFHDLGKSNVQTVDDQGIAHYPGHAQASCIIARPFFEALQ 307 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 + + HD L + + + + VE L AD + Sbjct: 308 FSIKKIAYLEKLILEHD-------LKLQPVSAQLQQLIRVHGIEWVEDLMAVKRADNLAK 360 Query: 350 TGFESADYPQGRWLREAWEVAQS-----------VPTKAVVEAGFKGVEIREELT 393 + + + + + + + + G +G I + L Sbjct: 361 GSRAQYQLQRCTHISQIIQEIRDQKRPTSIRDLVITASDLKKLGIEGKTINKYLN 415 >UniRef50_A4IQ63 CCA-adding enzyme n=11 Tax=Bacillaceae RepID=CCA_GEOTN Length = 404 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 98/405 (24%), Positives = 157/405 (38%), Gaps = 69/405 (17%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHEE 57 + Y VGGAVRD LLG P+ D D + + P E++ + + V +H T E Sbjct: 21 EAYFVGGAVRDLLLGRPIGDVD-IATSALPDEVMAIFPKTIDVGSKHGTVVVVHEGTAYE 79 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RT+ + +LE+DLKRRD T+NA+A D++G IIDP+ G ++ Sbjct: 80 VTTFRTDGDYEDHRRPESVTFVR--SLEEDLKRRDFTMNAIAMDEHGTIIDPFGGQEAIE 137 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 RL+R V F ED LR++R RF ++ LGF +A +T + + +A L H++ Sbjct: 138 KRLIRTVGEADARFREDALRMMRAVRFVSQ---LGFSLAIDTKKAI--IANAPLLAHISV 192 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E E L +L + G L P + Sbjct: 193 ERMTMEMEKLLAGPFAAEALPLLAETG-LSTYLPGLAEKGE------------------W 233 Query: 235 TLSMAAMLSPQVDV---RFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 AA P + R+A LCH L GVK + ++P Sbjct: 234 LRRAAAYRWPWLAAREERWALLCHAL-------------------GVKESRPFLRAWKLP 274 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 N++ D A + + + + + + A + G+ Sbjct: 275 NKVIDEAGAILATLAAVPEPAAWTNEQL--FLAGLKRALSVE-------VVRAALTGKPY 325 Query: 352 FESADYPQGRW--LREAWEVAQSVPTKAVVEAGFK--GVEIREEL 392 D + R+ L + +V K V++ K G ++E L Sbjct: 326 EPQHDELRRRFAALPIKTKGELAVNGKVVIDWIGKPAGPWVKETL 370 >UniRef50_B7VK01 Poly(A) polymerase n=23 Tax=Bacteria RepID=B7VK01_VIBSL Length = 472 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 74/340 (21%), Positives = 142/340 (41%), Gaps = 25/340 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFP--VFLHPQTHE 56 +LVGG VRD LLG KD D + +TP+++ L + +GR F + + Sbjct: 71 FDAFLVGGGVRDILLGSQPKDFD-IATNATPEQIKHLFRNCRLIGRRFRLAHIMFGRDII 129 Query: 57 EYALAR------TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDP 109 E A R ++ S G +++D +RRD TINA+ + + I D Sbjct: 130 EVATFRGHHQEPSKNVSAQSDEGMLLRDNVYGNVDEDAERRDFTINAMYYNIADYSIHDY 189 Query: 110 YNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 G+ DL+++L+R + + EDP+R+LR RFAA+ L F I ++T + E+ H Sbjct: 190 AGGVEDLEDKLIRLIGDPETRYREDPVRMLRAMRFAAK---LDFDIEEDTADPIEELAH- 245 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 L+ + R+++E+ L + + + ++R+ + +FP + F + + Sbjct: 246 -LLKDIPAARLYEESLKLLQSGHGLETYHLMREYNLFQQMFPSVAEHFTEGYDSHTEQML 304 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCH----DLGKGLTPPELWPRHHGHGPAGVKLVE 282 D + + L + FA + L L + + A +++ Sbjct: 305 DLVLDS-TDLRIEDGKRVNPAFMFAAMLWYPMNKLADKLVAEQGMAHYDAIMEASNIILD 363 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKL 322 + + + +P R V + + +++L Sbjct: 364 RQVKSIAIPRRHTATIREVWQLQLRLPRRNGKRAVRLMEL 403 >UniRef50_A1AQP2 Metal dependent phosphohydrolase n=4 Tax=Desulfuromonadales RepID=A1AQP2_PELPD Length = 404 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 113/412 (27%), Positives = 174/412 (42%), Gaps = 34/412 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 +++LVGG VRD LLG +D D V + E+ G++ V + + + + Sbjct: 19 RVFLVGGCVRDHLLGRGCRDIDLVA-ALSGDELGRCGFRLVAGRSTAPIWFRHDDAF--- 74 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 G T P+ L+ DL+RRD TIN+LA D G + DP++G GD+ R L Sbjct: 75 --------GTIELTPLTCPEA-LDADLRRRDFTINSLAMDLRGNLHDPFDGRGDIMGRFL 125 Query: 122 RHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 R S F +DPLR+ R RF + G+ + E L+ + + EL + ER +E Sbjct: 126 RPCSPDTFRDDPLRIFRAFRFESD----GWSMTGECQYLIGQHQWSEELSRIPMERFSRE 181 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPA-KWHPEIDTGIHTLMTLSMA 239 A + P+ FF + G PE+ + +PA ++HPE D H++ + Sbjct: 182 MLKACSAARPERFFLAMLKFGVGAGYLPELFRMARIPAGPLRYHPEGDLLTHSIQVMQRV 241 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 A S RF L HD+GK T P +P HHGH +GV+L QLC RLR+ R+ Sbjct: 242 AERSTDPLARFCALFHDIGKLSTDPARYPSHHGHDRSGVELARQLCSRLRLSARYRNALA 301 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 + H + + L T + + K L L S AD Sbjct: 302 AICRLHMTFNNWEELRDGTR---LRAAEQAVKSGITGILPLVSAADRARSEEPAG----- 353 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPKP 411 W A V + +E G ++ + R + + +R + Sbjct: 354 -------WSRAVQVVRMSTIELGMDQQQLEKMPADLRSDLILQLRIERFRQA 398 >UniRef50_Q0AVZ3 tRNA nucleotidyltransferase (CCA-adding enzyme) n=2 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AVZ3_SYNWW Length = 437 Score = 254 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 88/415 (21%), Positives = 164/415 (39%), Gaps = 50/415 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG-------RDFPVFLHPQT 54 + Y+ G +RD LLG + D + + P + + G D+ + Sbjct: 22 QAYIYGACIRDYLLGKEPINWD-ITTNALPNNTVVIFDENEGFTSIPSVEDYGIVTLHFK 80 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 E + ++G + +DL +D T+N++A ++ I+DPYNG+G Sbjct: 81 GESCQV--NTFRTGEARR-------FADDISEDLLHKDFTMNSIAYNEQAGIVDPYNGVG 131 Query: 115 DLQNRLLRHVSPAF---GEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 D++ RL+R + ED R+LR RF ++ LGF+I E L M+++ Sbjct: 132 DIEKRLIRCAQNPYEQMQEDSARILRAVRFESQ---LGFKIEAELLQAMKDLKDTVP--- 185 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 + RV E L + P + L + G L L PE+ G + +H + D H Sbjct: 186 ASGSRVRNEFIQLLLSEQPSRSIRRLLELGLLERLIPELMPAIGFDTHSSYHDK-DVFEH 244 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKG---LTPPELWPRHHGHGPAGVKLVEQLCQRL 288 +L+ L P + +R A L HD+ K + +GH G ++ + + RL Sbjct: 245 SLVVLDNTE---PNLTLRLAALLHDIDKPNCLTIDEDGEGHCYGHASGGSEMAQAILGRL 301 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 + + + H + F ++ +I +L + P +++L AD++G Sbjct: 302 NFDRKTIQAVSSLIKEHM--NDFGNISDLSIKRLIRRVG----PDNIDRLFELQLADIKG 355 Query: 349 RTGFESADYPQGRWLREAWEV----------AQSVPTKAVVEAGF-KGVEIREEL 392 + + +EV + ++ G+ G +I E + Sbjct: 356 SALSSRDPERITKIRNKCFEVLSRREPLTVHDLDISGYDLLSLGYPPGKKIGETM 410 >UniRef50_A6W2I1 Poly(A) polymerase n=6 Tax=Oceanospirillales RepID=A6W2I1_MARMS Length = 484 Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 97/391 (24%), Positives = 153/391 (39%), Gaps = 59/391 (15%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEM--LDAGYQQVGRDFP--VFLHPQTHE 56 +LVGG VRD L+G+ KD D VV +TP+E+ + + + +GR F + Sbjct: 56 FDAFLVGGCVRDHLIGIKPKDFD-VVTNATPEEVHTIFSNSRLIGRRFKLVHVTFGREII 114 Query: 57 EYALARTE------------------RKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINAL 98 E + R + S G +E+D +RRD T NAL Sbjct: 115 EVSTFRANSAQDDSDDDDTQNSSLKGKDSARSAHGIVLRDNVYGNIEEDAERRDFTFNAL 174 Query: 99 AQDD-NGEIIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIAD 154 + + I D GL D++N+ +R + + EDP+R+LR RFA + LGF + Sbjct: 175 YYNVKDFSIHDYCGGLKDIENKQIRIIGDARQRYQEDPVRMLRAIRFAGK---LGFELEA 231 Query: 155 ETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALF 214 ET A ++EM H L+H+ P R+++E L + N F +LR G R LFP+ DAL Sbjct: 232 ETAAPIKEMAH--LLDHIPPARLFEEVLKLLGSGNGIETFHLLRQYGLFRYLFPDTDALL 289 Query: 215 G--------------VPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKG 260 + I +G T A +L P V +R Sbjct: 290 QSGWKRNDIDPEAFILQGLKNTDDRIQSGKTTAPYFLYAVLLWPSVALR---------HE 340 Query: 261 LTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIV 320 + P A +++ +P R + + E D+ + P K Sbjct: 341 EFQAQGMPATPALHQAANMVLDNQVASTAIP---RRFSTPMREIWDMQYRLPKRYGKRAF 397 Query: 321 KLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 L + +R + S A++ G Sbjct: 398 LLLEH-PRFRAGFDFLLIRELSGANLDGLGD 427 >UniRef50_C4FTJ0 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FTJ0_9FIRM Length = 416 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 88/390 (22%), Positives = 140/390 (35%), Gaps = 51/390 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLHPQTHEEYA 59 + Y VGG VRDALLG + D D + +TP E+ VG+ + E Y Sbjct: 28 EAYFVGGCVRDALLGKEIHDID-IATSATPDEIQGIFPVTFDVGKKHGTIVVVYKKENYE 86 Query: 60 LARTERKSGSGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 + T R G+ L +D RRD TINALA D G + D + G DLQ Sbjct: 87 I-TTFRTEGTYSDRRRPDQVNFVRNLREDTLRRDFTINALALDRLGRVYDYHGGEQDLQA 145 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 ++R V F ED LR++R RFA++ LGF I +T + ++ A L +++ E Sbjct: 146 GIIRAVGTAMERFDEDALRMMRALRFASQ---LGFEIESQTFEAIGQL--APNLSYVSIE 200 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E + ++ L + G L + V A + W +T Sbjct: 201 RIRIELSKLMQGDYLGTSYKALTESGLCAYLL----GMEQVDALSVWQQVYETL-----A 251 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 +AA L+ + + L LG T + + N Sbjct: 252 AQIAAGLARDERLVWWALVKALGLDSTQ-----------------ARAFLRDWKHSNPFI 294 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 + E D L+ + ++ + A + A +G + Sbjct: 295 KDVSDLLEL-DQAFASGPLDAWQLYQMPTHVLA----------IYETYAFHQGWLSQSNQ 343 Query: 356 DYPQGRWLREAWEVAQSVPTKAVVE-AGFK 384 L A ++ + V+E G Sbjct: 344 LSQAKAQLPLASRSDLAINGQKVMEALGLS 373 >UniRef50_A8ZWH5 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZWH5_DESOH Length = 474 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 118/442 (26%), Positives = 168/442 (38%), Gaps = 55/442 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 K+Y+VGGA+RD L G +D D + + P ++ V L + H Sbjct: 23 KLYVVGGALRDHLAGRLPRDVDIICDEA-PNVARCIAKARLSGAVVVKLEKKPHPPC--F 79 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN-----GEIIDPYNGLGDL 116 R K+ + PD + DL+ RD T+NA+A GEIIDP G+ D+ Sbjct: 80 RVVDKNNPAESIDVVTLHPDG-IRADLEARDFTVNAMAAALLPGGRIGEIIDPLGGMADM 138 Query: 117 QNRLLRHV-SPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 QNRLLR AF DP+R+LR ARFAA L F I ETL M G L E Sbjct: 139 QNRLLRACSGTAFAADPVRILRAARFAA---TLDFTIFPETLDRMAAAV--GLLTRSAFE 193 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E L + Q+L D GAL VLFPEI A+ G H +D HTL T Sbjct: 194 RITAELFELLACPDALPHIQMLDDIGALDVLFPEIAAMKGCAQNGFHH--LDVWGHTLET 251 Query: 236 LSMAAMLSPQVD----------------------VRFATLCHDLGKGLTP----PELWPR 269 L L + D ++ ATL HD GK + Sbjct: 252 LEHCERLLRRPDVLFTKNAAAFCRSMAGKNRLPVIKLATLLHDAGKPGCKIFDETKNRQV 311 Query: 270 HHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF--PMLNPKTIVKLFDSID 327 +GH G + + R+++ N +L+ H P + P TI + F+++ Sbjct: 312 FYGHDREGETIAGNIAHRMKLSNSDTAFLQLLVRCHMRPMALSRPGVKPATITRWFETVA 371 Query: 328 AWRKPQRVEQLALTS-----EADVRGRTGFESADYP----QGRWLREAWEVAQSVPTKAV 378 + A AD + F +R + + Sbjct: 372 DNGLALLLLAAADICAKSGSRADPMEKERFCQWADQTAADYCLRIRPVLGQTDLLSGADL 431 Query: 379 VEAGF-KGVEIREELTRRRIAA 399 + G G ++ L + R Sbjct: 432 QDMGMAPGPDMGRVLRKVRQHQ 453 >UniRef50_Q2RZU6 TRNA nucleotidyltransferase/poly(A) polymerase family protein n=32 Tax=Bacteria RepID=Q2RZU6_SALRD Length = 594 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 113/436 (25%), Positives = 168/436 (38%), Gaps = 61/436 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVG-----STPQEMLDAG---YQQVGRDFPVFLHP 52 ++ Y VGG VRD LLG D D+V VG + + + +A V F Sbjct: 69 IEAYAVGGMVRDVLLGRSTTDLDFVTVGPETGIALAEAVGEALGGRTAHVYPKFGTAAIR 128 Query: 53 Q--------------THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINAL 98 E+ AR E TLEDD RRD T+NA+ Sbjct: 129 IPAADALPDDHPDDALVLEFVAARKESYRSDSRKPEV----EAGTLEDDQYRRDFTVNAM 184 Query: 99 AQDDN----GEIIDPYNGLGDLQNRLLRHV---SPAFGEDPLRVLRVARFAARYAHLGFR 151 A G ++DP++G DL+ + + + F +DPLR++R ARFA + L FR Sbjct: 185 AIHLTPDRFGALLDPFDGRRDLERQTIDTPLDPADTFEDDPLRMIRAARFATQ---LEFR 241 Query: 152 IADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEID 211 ++D M H E+ L+ ER+ +E L P + F++L G L + PEI Sbjct: 242 VSDRVFDAMGTQAHRVEI--LSQERITEELHKMLEADTPSIGFKILEASGVLAHVMPEIQ 299 Query: 212 ALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQ------VDVRFATLCHDLGKGLT--- 262 L GV + D HTL L A + +R+A L HD+ K T Sbjct: 300 RLKGVDVVNGRDHK-DNFYHTLEVLDNVAERTSDRPGAETRWLRWAALLHDIAKPKTKRF 358 Query: 263 PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR-DLARLVAEFHDLIHTF--PMLNPKTI 319 PE HGH G +++ L ++ R+P + R D + + H + + Sbjct: 359 DPEDGWTFHGHEDVGARMIPDLFRKWRLPTDERLDYVQKLVRLHLRPIALADEKVTDSAV 418 Query: 320 VKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVV 379 +L ++ L +DV Y R E ++V K + Sbjct: 419 RRLLYEAG-----DDIDDLMTLVRSDVTSNNPDRRRRYQ--RAFDRVEEKMRAVEEKDRL 471 Query: 380 ---EAGFKGVEIREEL 392 E G EI E L Sbjct: 472 RNFEPPVDGYEIMETL 487 >UniRef50_Q67QK4 Putative RNA nucleotidyltransferase n=1 Tax=Symbiobacterium thermophilum RepID=Q67QK4_SYMTH Length = 457 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 101/431 (23%), Positives = 154/431 (35%), Gaps = 56/431 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY--QQVG--RDFPVFLHPQTHEE 57 + +VGGAVRD LLGL +D D + P E+ + VG R+ L P Sbjct: 42 EAVVVGGAVRDLLLGLVPQDWDL-ATSARPAELQALFPEGRAVGAARETGTLLIPGDG-- 98 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 T + G LE DL RRD TI+A+A G +IDP G DL Sbjct: 99 -----TTYEITPYRAGR---------LEGDLARRDFTIDAMAATPEGRLIDPLGGRRDLA 144 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++R EDPLR+LR R AA+ F + + A L+ + P Sbjct: 145 AGVVRACGRPEDRLAEDPLRMLRAVRLAAQ-----FDLELDPALARAIAALAPRLQAVAP 199 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E L T P Q LR+ G L PE+ + GV + H+LM Sbjct: 200 ERIGAEFGRLLVTDRPAWGMQRLRELGLLHQFAPELLEMVGVEQN--RYHAFPVWEHSLM 257 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 L++ + +GH G +L ++L +RLR N Sbjct: 258 ALALVPPALHLRLAALLHDVAKPRCLSVDADGERHFYGHEAVGAELADRLLRRLRFDNAT 317 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 R+ A + H +H + + ++ I + ++ L AD E Sbjct: 318 REKAVHLVRRHMDLHLDGPVTDAALRRMVRRIGV----EHLDDLVQLRRADRLASGKREG 373 Query: 355 ADYPQGRWLREAWEVA-----------QSVPTKAVVEAGFKGVE--IREELTRRRIAAVA 401 P + + +V V+ A +G + + L Sbjct: 374 DLGPDTMAILDGIRRVLAEDAALKVTDLAVDGHDVMAAFGRGPGPYVGQVL--------E 425 Query: 402 SWKEQRCPKPE 412 + E+ +PE Sbjct: 426 ALLEEVLDRPE 436 >UniRef50_C6ACD6 tRNA nucleotidyltransferase n=2 Tax=Bartonella RepID=C6ACD6_BARGA Length = 418 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 94/415 (22%), Positives = 156/415 (37%), Gaps = 57/415 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYA-- 59 + +VGGAVR+ LLG P+ D D PQ+++ + + P + T A Sbjct: 31 EARIVGGAVRNQLLGQPISDIDIATT-CLPQQVIARVEEAGFKAIPTGIAFGTITVVAHS 89 Query: 60 --LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 T + G A + D +RRD TINAL D G + D GL D+ Sbjct: 90 CSYEVTTLRCDIETDGRHAKVAFGRDWKKDAERRDFTINALYCDAAGNLYDDVGGLSDIA 149 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +R +R + ED LR+LR RF A Y + L ++ L+ L+ Sbjct: 150 SRTVRFIGIAEDRICEDYLRILRFFRFFAWYGAGR----PDVQGLKACVSLKHGLKKLSS 205 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+W E + L +P +R L ++FPE + IH L+ Sbjct: 206 ERIWAEMKKLLAAFDPTRALLWMRQSRILALIFPETERW------------GIDAIHALV 253 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 A +R + L PP+ H ++ QRL ++ Sbjct: 254 KTEQALGWKVDPLLRL--------ESLLPPDPIRLH------------EMAQRLHFSHKE 293 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR----- 349 + E+ +L + + KL I + ++QL+L+ A Sbjct: 294 T---TRLKEWAELEIINQNCSDHFVQKL---IYFHGRQPVLDQLSLSVAASHLDNLEKSD 347 Query: 350 TGFESADYPQGRWLREAWE-VAQSVPTKAVVEAGF-KGVEIREELTRRRIAAVAS 402 ++ DY + L + W+ + +++ GF KGV + ++L + V S Sbjct: 348 ALQKAEDYVKLYQLAKKWQIPTFPINGNDLIKKGFAKGVLLGKKLKELEMIWVES 402 >UniRef50_C1ZGH1 tRNA nucleotidyltransferase/poly(A) polymerase n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGH1_PLALI Length = 420 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 89/421 (21%), Positives = 148/421 (35%), Gaps = 66/421 (15%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG----YQQVGRDFPVFL-------- 50 GG VRD LLG KD D V + P+E+ + VG F V + Sbjct: 22 ALFAGGCVRDLLLGKTPKDYD-VATSANPEEVQQLFGYRRTKAVGASFGVIMVLPARKKG 80 Query: 51 --HPQTH---EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NG 104 H ++ T RK G G + E+D +RRD TIN + D Sbjct: 81 EPHHKSDQPAIPPVEVATFRKDGLYVDGRRPETVTFSSPEEDAQRRDFTINGMFFDPLTE 140 Query: 105 EIIDPYNGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMR 161 + D G DLQ+R LR + F ED LR+LR RF + L F I ET ++ Sbjct: 141 TVHDFVGGQIDLQSRQLRAIGIAADRFKEDKLRLLRAVRFNS---ILDFSIEFETWRAIQ 197 Query: 162 EMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAK 221 ++ A E+ ++ ER+ E L + Q L G +F +I Sbjct: 198 DL--APEICVVSHERIAAELRRMLAHPSRHSSIQTLDHAGLTGAIFGKI----------- 244 Query: 222 WHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLV 281 + + D+ A T LW R V+ + Sbjct: 245 -------------------LSATSPDLLLALQSLKTDHFETAMALWLR-----ELPVETL 280 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALT 341 +C +LR+ N+ RD + H + + + + + + + + Sbjct: 281 RSICSQLRLSNQERDAIVWL---HTMQSAWLEFSDWPVCRQKRLLAYPLVNELIASGQAL 337 Query: 342 SEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAV 400 + A + ++A W +E + V + ++ G G + ++ L + R + Sbjct: 338 ASAQLLESRHVDAAIERLQSWSKEEIDPPLQVTGEDLIHWGISPGPQFKQILEQLRDGQL 397 Query: 401 A 401 Sbjct: 398 E 398 >UniRef50_C0ZCG8 Probable tRNA CCA-adding enzyme n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZCG8_BREBN Length = 407 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 88/417 (21%), Positives = 155/417 (37%), Gaps = 60/417 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHE-- 56 + Y VGG VRD LL PV D D + P +++ V G + Sbjct: 18 FEAYYVGGCVRDWLLQRPVHDIDIC-TNAHPGDVILLFPDHVPTGLKHGTVSVKVEGQLF 76 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE K L DL+RRD T+NA+A D + + DP+ G D+ Sbjct: 77 EVTTFRTEGKYEDYRRP--AEVQFVSELRLDLERRDFTMNAMAMDRHQVLHDPFGGQEDI 134 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 ++RL+R V F ED LR+LR RFA++ LGF I D+T+ M++M A L H+ Sbjct: 135 EHRLVRAVGIPLERFQEDALRLLRGVRFASQ---LGFVIEDQTMLAMKQM--APLLAHIA 189 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ +E L ++ P+V Q+L + + PE++ LF + H Sbjct: 190 VERIREELNKTLDSKAPEVGCQLLNETRLMAYA-PEVEKLFILSN-----------EHAW 237 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 + + + FA ++C+ L++ Sbjct: 238 RLRHLQTVTQKWSLLLFAANY----------------------SPVQAREVCRFLKMSKR 275 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 + + E + P + ++ + E L R Sbjct: 276 ETEAICCLVELLTRLQ--PKWDVPQEIEWGPLLLEVGWDTCNEFFLLLQACWWEER---- 329 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQRCPK 410 Q ++ + +++P K + + G++++ + ++ + E + Sbjct: 330 -----QSFSMQALLDQYENMPVKTIKDLAITGLDLQVAVQKKPGEWIVRVLESLLRQ 381 >UniRef50_A4A0Y5 Poly A polymerase n=1 Tax=Blastopirellula marina DSM 3645 RepID=A4A0Y5_9PLAN Length = 426 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 85/412 (20%), Positives = 147/412 (35%), Gaps = 44/412 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHEE 57 + GG VRD LLG +D D V + P+ + ++ +G F V + Sbjct: 26 QALWAGGCVRDMLLGRDPQDFD-VATDAPPERVRQIFGEKRTLAIGASFGVITVQGGKKR 84 Query: 58 YALARTERKSGSGY-TGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGE-IIDPYNGLGD 115 + + GY G + E+D KRRD TIN + D + I D G D Sbjct: 85 GQIEVATFRQDVGYSDGRRPDEVRFTSAEEDAKRRDFTINGIFYDPDASAIYDFVGGQID 144 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L++RL+R + F ED LR+LR RF++ + F + T+ ++ H+ + + Sbjct: 145 LRDRLVRAIGDPNQRFAEDKLRMLRAIRFSSTFQ---FDLEMNTMRAIQ--RHSRNIAVV 199 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ERV E L + +LRD + PE+ + T Sbjct: 200 SAERVAVEMRKMLCSPRRVEAVVLLRDSWLFPTVLPEVITVID---------HAPRWTET 250 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 L TL + A L G + L+ ++C+R ++ N Sbjct: 251 LRTLQFLSG--NDFATALAALLRF-------STARELASGDPRKPIPLLVEVCRRWKLTN 301 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 + + + ++ T + + ++ R+E+LA + A + R Sbjct: 302 DETRDVQWLLRQVHVLQTAKDQSWPRLQRVL-------VDPRIEKLADLASAIAKARMES 354 Query: 353 ESADYPQGRWLR---EAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAV 400 L E + ++ AG K G + L R A + Sbjct: 355 LEHLDFVRERLGWAVERLNPSPVATGDDLIRAGLKPGRHFQGLLESIRDAQL 406 >UniRef50_Q3A9F0 PolyA polymerase/tRNA nucleotidyltransferase family protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3A9F0_CARHZ Length = 441 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 103/430 (23%), Positives = 161/430 (37%), Gaps = 49/430 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 K Y VGG+VRD LL PVKD D P+E+ + + G +F EE + Sbjct: 15 KTYFVGGSVRDMLLSRPVKDVDL-ATFQKPREVGEKLLKAFGGNF-----FPLKEELLIY 68 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG----EIIDPYNGLGDLQ 117 R K G +LE+DL+RRD T+NALA NG E+ID + G DLQ Sbjct: 69 RLVFKDGGETYQVDILPVFGESLEEDLRRRDFTVNALALPVNGEFPREVIDLFGGRNDLQ 128 Query: 118 NRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 R++R +S EDP+R+LR R A LGF + ET+ + ++ ++ + ER Sbjct: 129 ARIIRMISAENILEDPVRILRGIRLA---GELGFAVEQETMVVFKQYIQ--YIKKMPGER 183 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 V +E + T + +L G V + + + +H H + TL Sbjct: 184 VAEELKKIFTLKPAVPMVDMLFHTGFFEVFNLGLKEGYELYQN--YHHSETVYRHLIDTL 241 Query: 237 SMAAMLS-----------PQVDVRFATLCHDLGKGLT---PPELWPRHHGHGPAGVKLVE 282 + L P ++ HD+GK T E R GH V ++ Sbjct: 242 NRMEELLEDNPLGIRSDYPPYLLKMVAFFHDIGKPGTLSYDKEGRTRFFGHEKESVNRLK 301 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDL---IHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLA 339 L + + + ++ + H + T ++ + I++L + Sbjct: 302 PFLDYLNFSHREKRVLTVLIQNHMRLLSLKTAAKVSGEAILRLVHDTGDLFLELILLY-- 359 Query: 340 LTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAA 399 AD + D R L + + G G EI + L A Sbjct: 360 ---LAD---KGEKARDDLEFLRGLINFYYGYLEF------KEGLSGKEIMKTLNLPESPA 407 Query: 400 VASWKEQRCP 409 V K Sbjct: 408 VGHIKNYLLK 417 >UniRef50_D0KJD5 Poly(A) polymerase n=10 Tax=Enterobacteriaceae RepID=D0KJD5_PECWW Length = 482 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 74/344 (21%), Positives = 134/344 (38%), Gaps = 32/344 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFP--VFLHPQTHEE 57 + YLVGG VRD LLG KD D + +TP ++ + VGR F + E Sbjct: 73 EAYLVGGGVRDLLLGKKPKDFD-ITTNATPDQVRKLFRNCRLVGRRFRLAHIMFGPEVIE 131 Query: 58 YALAR-----------TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGE 105 A R + S +G ++E+D +RRD +IN+L + Sbjct: 132 VATFRGHHDQHQEQQEVKNSSQQAQSGMLLRDNIFGSVEEDAQRRDFSINSLYYSISDFS 191 Query: 106 IIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMRE 162 + D NGL DL+ ++R + + EDP+R+LR RFAA+ L ++ ET + Sbjct: 192 VRDYTNGLNDLRQGVIRMIGDPETRYREDPVRMLRAVRFAAK---LNMTVSPETAEPIPR 248 Query: 163 MTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKW 222 + A L + R+++E+ L + +++L + + LFP + F + Sbjct: 249 L--ASLLHDIPAARMFEESLKLLQSGYGYPTYKMLCEYQLFQPLFPLLSRHFTPNGDSTL 306 Query: 223 HPEI-DTGIHTLMTLSMAAMLSPQVDVRFATLCHDL----GKGLTPPELWPRHHGHGPAG 277 + +T L + F+ + + L A Sbjct: 307 ERMVAQVLKNTDQRLQNDMRV--NPAFLFSAMLWYPLIEHAQKLAQESGLAYFDAFALAM 364 Query: 278 VKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK 321 ++++ C+ L +P I L R + + + +++ Sbjct: 365 NDVLDEQCRSLAIPKRITSLVRDIWQLQTRLSRRQGKRAYKLME 408 >UniRef50_Q1WU19 CCA-adding enzyme n=30 Tax=Lactobacillales RepID=CCA_LACS1 Length = 404 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 97/409 (23%), Positives = 148/409 (36%), Gaps = 61/409 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLH--PQTHE 56 + Y VGG+VRD LLGLP+ D D + + P+E+ + V G + + T Sbjct: 25 FEAYFVGGSVRDTLLGLPIHDVD-IASSAYPEEIKQIFSKTVDTGVEHGTVMVLDHGTGY 83 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE +LE+DLKRRDLTINALA DD G+IID ++GL DL Sbjct: 84 EITTFRTESTYQDYRRPDKVEFVR--SLEEDLKRRDLTINALAMDDKGKIIDLFDGLKDL 141 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +N ++R V F ED LR++R RF ++ L F++ +T +++ ++ LE + Sbjct: 142 KNGIIRAVGNPEERFHEDALRMMRAVRFGSQ---LDFKVELDTFNAIKK--NSHLLEKIA 196 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E L +NP+ Q D + P D Sbjct: 197 IERIHVEWVKLLLGKNPKQGLQEFLDTELYKYC-PLFA---------------DKYAELK 240 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 L + + + L T + L + + N Sbjct: 241 SILEFSDFKLNTEEECWTLLSDVFKLKDTD-----------------ISNLLRSWKSSNN 283 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 I + I KL + + L A +RG + Sbjct: 284 IIKYVIAASLCVQKIKDS---------KLDIETYYQNGIEII--LTANQIAKIRGFGMDD 332 Query: 354 SADYPQGRWLREAWEVAQSVPTKAV-VEAGFK-GVEIREELTRRRIAAV 400 + L + K + EAG K G + E L + V Sbjct: 333 NELKNNYDKLPIKSRKEMKINGKDLVQEAGVKPGKIMGEILNKLEKEIV 381 >UniRef50_C9R471 Poly(A) polymerase (PAP) (Plasmid copy number protein) n=68 Tax=Gammaproteobacteria RepID=C9R471_AGGAD Length = 592 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 85/367 (23%), Positives = 147/367 (40%), Gaps = 35/367 (9%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG---YQQVGRDFP--VFLHPQTHE 56 + Y+VGG +RD LLG KD D V + P+++ + VGR F + + Sbjct: 26 EAYVVGGCLRDLLLGKKPKDFD-VATNARPEQIQAVFQRQCRLVGRRFRLAHVMFGREII 84 Query: 57 EYALART-------ERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIID 108 E A R E+ + G TLE D +RRD ++NAL + + + D Sbjct: 85 EVATFRAGHMEHHNEKLAKQSEEGMLLRDNVYGTLEQDAERRDFSVNALYYNPQDNTLKD 144 Query: 109 PYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 +NG+ DL+N LR + + EDP+R+LR RF A+ L + + A ++E++H Sbjct: 145 YFNGIDDLKNGKLRLIGDPVTRYQEDPVRMLRSIRFMAK---LEMFLDKPSEAPIKELSH 201 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 L+++ P R+++E+ L + +++LR G LFP + F + Sbjct: 202 --LLKNIPPARLFEESLKLLQGGSGVKTYRLLRQYGLFEQLFPLLQNYFTEREDSMAEKM 259 Query: 226 IDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKG----LTPPELWPRHHGHGPAGVKLV 281 I + T +A L FA + L + + A L+ Sbjct: 260 ILRAL-TSTDERVADKLPINPAFLFAAFFWYPLRERVEMLKNEGGLNNYDAYALASNDLL 318 Query: 282 EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALT 341 + LC L +P + R + PK++ ++ + L Sbjct: 319 DVLCNALAIPRRHTAVIRDIWSLQLQFL---KRTPKSVQRVMEQSKFRAGFD-----LLV 370 Query: 342 SEADVRG 348 A++ G Sbjct: 371 MRAEIEG 377 >UniRef50_C5CF12 CBS domain containing protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CF12_KOSOT Length = 866 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 92/421 (21%), Positives = 147/421 (34%), Gaps = 60/421 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTP---QEMLDAGYQQV--GRDFPV---FLHP 52 M YLVGG VRD LL +P D D VV G + ++ + F F Sbjct: 471 MPTYLVGGMVRDLLLNIPNYDIDVVVEGDARIFSHTVKRYFDVKIVEHKSFKTSSIFFSD 530 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIID 108 + A ARTE T++ DL RRD +INA+A N G ++D Sbjct: 531 GVRIDVATARTEFYEE----PAVLPNVETSTIKKDLYRRDFSINAMAIKLNHEEYGLLLD 586 Query: 109 PYNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 + DL ++R + +F EDP R+LR RF R+ GF+I + TL L+++ + G Sbjct: 587 FFGCRKDLAKGIIRILHNLSFIEDPTRILRAIRFEQRF---GFKIEERTLQLLKKAVNDG 643 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 LE +T +R+ E E L PQ + + L+ LFP GV + D Sbjct: 644 YLERVTGQRLRDELEKILAEPEPQNAVKRMTKLDILKHLFP------GVRHSKELQKHFD 697 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQR 287 T+ S ++ V + + + T + R Sbjct: 698 RLFTRWETIEKLTNESRKITVMVMLVLENTPEESTDW-------------------IISR 738 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 P + ++ + + + +L + A Sbjct: 739 YGFPKRLPEVLKTSLRILKKLQEMEDWRFSNLYRLMERPSAE-------------IFHFI 785 Query: 348 GRTGFESADYPQGRWLREAWEVAQSVPTKAVVEA-GFK-GVEIREELTRRRIAAVASWKE 405 E ++L+ V +++ G K G EI+ L A + E Sbjct: 786 DAHFDEKKSNILLKYLKALESNKPKVNGGILIQKYGLKEGPEIKMILKELYCARLEGLPE 845 Query: 406 Q 406 Sbjct: 846 S 846 >UniRef50_C0WTJ5 tRNA nucleotidyltransferase/poly(A) polymerase n=4 Tax=Bacilli RepID=C0WTJ5_LACBU Length = 405 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 83/408 (20%), Positives = 151/408 (37%), Gaps = 63/408 (15%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLH--PQTHEE 57 + Y VGG+VRD +L P+ D D + + P E+ + G + + T E Sbjct: 31 EAYFVGGSVRDTILQRPIHDVD-IATSAYPSEVKSLFKRTADTGIEHGTVMILDHGTGYE 89 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RTE +L++DLKRRD TINALA +NG+I D + GL D+ Sbjct: 90 VTTFRTESGYQDYRRPDKVTFVR--SLKEDLKRRDFTINALALSENGKITDLFGGLNDMS 147 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +++R V F ED LR++R RFA++ L F+I +TL + + H+ L+ + Sbjct: 148 KKIIRAVGDPEERFNEDALRMMRAVRFASQ---LDFKIEQQTLTGIYD--HSELLKKIAV 202 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E + + + ++ + + P+ V H + Sbjct: 203 ERIHSEFVKMMLGVDAKNGLNLMIKSQLYQFV-PDFSEHLTVLQKI-------VATHFDL 254 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + QV F ++ + +R + N+I Sbjct: 255 DNEV------QVWALFTSMFQFNRDQVI--------------------SFLKRWKTANKI 288 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + L E I + + N + A ++ + +++ D ++ Sbjct: 289 INDVILTTELIFQIKSHKVGN-------LELYKAGKQNVQNAVAIISNYTDFDSAKLIKA 341 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEAGF--KGVEIREELTRRRIAAV 400 D L + +V +++ G G ++ E L A + Sbjct: 342 YD-----QLPITTKKQLNVTGGDLIKRGILNPGPKLGETLEALEKAVI 384 >UniRef50_C7M1E9 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1E9_ACIFD Length = 462 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 105/412 (25%), Positives = 163/412 (39%), Gaps = 42/412 (10%) Query: 3 IYLVGGAVRDALLGLPVK-DRDWVVVGSTPQEMLDA------GYQQVGRDFPVFLHPQTH 55 +YLVGG VRDALLG+ D D +TP+E+++ + G F Sbjct: 27 LYLVGGVVRDALLGIEPNGDVD-ATTDATPEEIVEIVRPVATHFNLTGLRFGTVAFHYHG 85 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG---EIIDPYNG 112 + T R + L +DL RRD T+NA+A + +IDP+ G Sbjct: 86 VPLEV-TTHRGEAYDSSTRKPTVHFVSALAEDLLRRDFTVNAMAVEVTSDDPTLIDPFGG 144 Query: 113 LGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH--AG 167 + DL R LR +F +DPLR+LR ARF AR + E + + H A Sbjct: 145 MEDLLARRLRTPMDPRRSFSDDPLRMLRCARFIAR-------LDLEPQRALVDAVHELAP 197 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 LE ++ ER+ E L +P L D PE+ AL + H + D Sbjct: 198 RLEVVSRERIRDELSRLLVVPDPSKGLWFLVDTPLAAEFLPELPALR-LEQDPIHHHK-D 255 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPEL--WPRHHGHGPAGVKLVEQLC 285 HT+ A SP++ +R A L HD+GK T H H G ++ ++ Sbjct: 256 VLAHTIAV---TASCSPRLRLRLAALLHDIGKPATREIGPNGVSFHFHDVVGARMARRIL 312 Query: 286 QRLRVPNEIRDLARLVAEFHDLIHTFPM-LNPKTIVKLFDSIDAWRKPQRVEQLALTSEA 344 + LR PN++ D + E H HT+ + + + + +E L + Sbjct: 313 RELRYPNDLVDDVARLVELHLRFHTYAQGWSDAAVRRYVRDAG-----ELLEDLNELTTC 367 Query: 345 DVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEA---GFKGVEIREELT 393 D R + + E A+ + + + A G+E+ L Sbjct: 368 DATTRNERRRRMF--AERMATFEERARELAERDALRARRPPIDGLEVMRILE 417 >UniRef50_A4BLN3 PolyA polymerase n=2 Tax=Gammaproteobacteria RepID=A4BLN3_9GAMM Length = 475 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 97/369 (26%), Positives = 143/369 (38%), Gaps = 49/369 (13%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFP--VFLHPQTHEEY 58 YLVGG VRD LG KD D V + P+++ + +GR F E Sbjct: 84 AYLVGGGVRDLSLGREPKDFD-VATDARPEQVKQLFRNCRLIGRRFRLAHVYFGSEIIEV 142 Query: 59 ALARTERKSGSG-------YTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPY 110 A R +++G G T+E+D RRD T+NAL + ++D Sbjct: 143 ATFRALQEAGEADEQARVLENGRLLRDNVFGTIEEDALRRDFTVNALYYHIADFTLVDYV 202 Query: 111 NGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 G+ DL+ +LR + + EDP+R+LR RFA + LGFR+ ET + M H Sbjct: 203 GGMADLRCGVLRLIGAAEVRYREDPVRMLRAVRFAVK---LGFRMHPETAEAIPRMAH-- 257 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFP---------EIDALFGVPA 218 L H+ P R++ ET T F+ LR G LFP E A G A Sbjct: 258 LLGHIPPARLFDETLKLFVTGMGLEAFECLRHYGLFGYLFPATEAVLSGDEFGAALGFLA 317 Query: 219 PAKWHPEIDTGI--HTLMTLSMAAMLSPQVDVRF-ATLCHDLGKGLTPPELWPRHHGHGP 275 A + AA+L P + RF A H +G E Sbjct: 318 RALADTDRRVAEGKSVTPAFLFAALLWPSIAQRFTAAEPHAVGSIQEIQE---------- 367 Query: 276 AGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRV 335 A ++++ + + +P + + E L F K ++L R Sbjct: 368 AAGEILQDQTRCVSIPK---RFSIPMREIWSLQPRFERRTGKRALRLLSH---PRFRAAY 421 Query: 336 EQLALTSEA 344 + L L +EA Sbjct: 422 DFLLLRAEA 430 >UniRef50_Q31FF3 Poly(A) polymerase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FF3_THICR Length = 484 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 79/347 (22%), Positives = 132/347 (38%), Gaps = 36/347 (10%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG---YQQVGRDFP--VFLHPQTHEE 57 YLVGG VRD LLGL KD D VV + P+++ + +GR F + E Sbjct: 62 AYLVGGGVRDILLGLEPKDFD-VVTNAEPEQIKGVFKSRCRLIGRRFRLAHVYFGRNVVE 120 Query: 58 YALAR---------------TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD 102 A R TG ++E+D+ RRD TIN+L + Sbjct: 121 VATFRGDGDGQKSAGRSRKQVNHTRAVDDTGRLVRDNVYGSIEEDVWRRDFTINSLYYNI 180 Query: 103 -NGEIIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLA 158 + ++D G+ D++ LR + + EDP+R++R RFAA+ LGF I T A Sbjct: 181 RDFSVLDYTGGMEDIEKGQLRLIGDPEMRYREDPVRMIRAIRFAAK---LGFEIEPNTKA 237 Query: 159 LMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA 218 + E+ H L+ ++ R+++E + F+ LR G LFP+ L + + Sbjct: 238 PIYELAH--LLKDVSHARMFEEVLKLFHSGVAIEVFEKLRHFGLFTFLFPQTHHLLSMES 295 Query: 219 PA-KWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHG--- 274 I+ T + ++P FA + + L Sbjct: 296 EGFPRMLVIEALKSTDARIQSNKGVNPSFL--FAAMLWEPMLQRMEQHLAEDFSRQDAMF 353 Query: 275 PAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK 321 A ++EQ +P + + + P+ + + Sbjct: 354 AAANDVIEQQIYSTSIPKRFTAQIKDIWSLQFRLLNRQGNRPQKLFE 400 >UniRef50_B0K130 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=10 Tax=Thermoanaerobacterales RepID=B0K130_THEPX Length = 467 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 93/446 (20%), Positives = 168/446 (37%), Gaps = 67/446 (15%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 +Y+VGG +RD +L KD D+VV +++ +++G F F+ + Sbjct: 17 NLYIVGGYIRDRILNREAKDYDFVVQEDA-EKIAKLVAEKLGGTFVPFMAEKG------- 68 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG-----EIIDPYNGLGDL 116 + G + DL RD T+NA+A IIDP+ G+ D+ Sbjct: 69 --TYRVVVGDEILDFTNLRGEDIYIDLAHRDFTMNAMAIKLTDYFEFEYIIDPFGGMTDI 126 Query: 117 QNRLLRHVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 +NR ++HV F EDPLR LR RFA Y F I + T A +RE A ++ + PE Sbjct: 127 KNRKIKHVGMMTFKEDPLRALRAVRFAVTYK---FDIDESTKAKIRE--EAELIKQVAPE 181 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E L +N + +++ D + +F E+ + V ++ + IH+L T Sbjct: 182 RIMNEIFIILKEKNSHKYLRMMEDLKLMENIFEEVAKMKEV--GKCYYHLTNAWIHSLKT 239 Query: 236 LSMAAMLSPQV--------------------------DVRFATLCHDLGKGL---TPPEL 266 + + + ++ L HD+GK E Sbjct: 240 VEEYENIINSMRFPKDVYDIVSEYLDRKLSSDNKVKDIIKLGALFHDIGKPESIYIDTEN 299 Query: 267 WPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSI 326 + H G ++V+++ R+++P + L + + +H + + T LF Sbjct: 300 RVHFYNHETKGAEIVKKIASRMKMPKKESSLLKKLVLYHMKPLMYYVNGGPTNKSLFRFF 359 Query: 327 DAWRKPQRVEQLALTSEADVRGRT---GFESADYPQGRWLREAWE--------VAQSVPT 375 + + L S+AD G E ++ + + Sbjct: 360 SELKDDSI--AILLLSQADFTATRLNLGKEEEIPRYTDFITRLLKRYVEFKETEKPLLSP 417 Query: 376 KA-VVEAGFK-GVEIREELTRRRIAA 399 ++ K G ++ + L R Sbjct: 418 LDIIINFDVKDGKKLGQILYEIRKNR 443 >UniRef50_Q1YQK0 Poly(A) polymerase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YQK0_9GAMM Length = 453 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 78/339 (23%), Positives = 135/339 (39%), Gaps = 26/339 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY--QQVGRDFPVFLH--PQTHE 56 + Y+VGG VRD L+GL KD D V + P E+ + + +GR F + + Sbjct: 52 FEAYVVGGCVRDLLIGLKPKDFD-VATSAKPWEVKELFRRSRIIGRRFQIVHVQFSREII 110 Query: 57 EYALARTERKSGSGYT-------GFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIID 108 E R+ + G T+E+D RRDLT+NAL D I D Sbjct: 111 EVTTFRSNSSQSTSKNRRQQTDSGMLTRDNVFGTVEEDASRRDLTVNALYYDPSTNSIHD 170 Query: 109 PYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTH 165 NG+ D+ +++R + F EDP+R+LRVARFAA+ LGF I T M+ Sbjct: 171 FTNGIDDVDAKIIRIIGDPETRFREDPVRLLRVARFAAK---LGFNIEPATANPMKH--R 225 Query: 166 AGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPE 225 A +L+ ++P R++ ET + F++L + + P++ + Sbjct: 226 AADLQQVSPPRLFDETLKLFMSGQGLDTFKILVEHRLFDYIVPQLGPMLNDRQGIPMKLV 285 Query: 226 IDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTP---PELWPRHHGHGPAGVKLVE 282 I+T + + ++P +A L + L + A +++ Sbjct: 286 SQALINTDKRIRASQRVTPAFI--YAALLWPAVQRLASNFEKNGNSSPYALSKAAGEIIL 343 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK 321 +P R + + + + +V+ Sbjct: 344 NQIPVTAIPKRFSIPMREIWDLQLHLRRRGGNRAQRLVE 382 >UniRef50_C8X424 tRNA adenylyltransferase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X424_DESRD Length = 368 Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 124/404 (30%), Positives = 170/404 (42%), Gaps = 43/404 (10%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHEEY 58 M+IYLVGG+VRDA LG P +DRD+VV+ +T E ++VGRD PVFL Sbjct: 1 MRIYLVGGSVRDAFLGRPRQDRDYVVLQTTEDEFKRCFPRAKRVGRDSPVFLL------- 53 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQ 117 G + + DL+ RDLT+NALA+D G + DLQ Sbjct: 54 -------------DGDEYTVSSAADITADLETRDLTVNALARDVATGTLYAHPQAETDLQ 100 Query: 118 NRLLRHVSPA-FGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 R+LR V A F DPLRV R ARFAA + +R+ + LA+M E+ AG L ER Sbjct: 101 RRVLRPVCAANFRADPLRVYRAARFAACWPE--WRVHSDLLAVMHEVGQAGLLSQPAAER 158 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 V E AL P F ++ G L F E +PA + HT + Sbjct: 159 VGGEVRRALQGVRPGRFLSLIVQTGCLGAWFAEWQGAEAIPAGPPAYHSGSVLAHTCRVV 218 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 A + CHD+GK TP +LWP H+ H G + Q QRLR+P + Sbjct: 219 DELAG---SETAAWMGWCHDMGKAGTPAKLWPHHYRHEHRGEAMAWQQGQRLRLPKRLIR 275 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 + A +H L + L T + L + + VE + AD Sbjct: 276 AGGIAARWHMLAGRYDALRAGTQLDLVLRLH---RAGLVEPFCELARADGSPGLLPRME- 331 Query: 357 YPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 L V+ + G +G E L + +I A+ Sbjct: 332 ----ADLTRVLAVSLPAN-----KRG-QGPASGEYLRQLQIRAL 365 >UniRef50_Q7VFG8 Poly(A) polymerase n=1 Tax=Helicobacter hepaticus RepID=Q7VFG8_HELHP Length = 468 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 82/440 (18%), Positives = 138/440 (31%), Gaps = 70/440 (15%) Query: 2 KIYLVGGAVRDALLGLPVK------DRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTH 55 + Y+VGG VRD LL D D + + PQE++ + Sbjct: 62 EAYIVGGCVRDMLLAQNSHIPYVINDYD-ITTSALPQEVMKLFAHTIHTGLKYGTISVLI 120 Query: 56 EEYALARTERKSGSGYTGFTCY--AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGL 113 E + T + Y +L DL+RRD TINALA +ID GL Sbjct: 121 ESQSYEVTTFRIDGSYINARSPKNVTFTRSLAQDLQRRDFTINALAYAPCSGLIDEVGGL 180 Query: 114 GDLQNRLLRHVSPAFG---EDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 DLQ++ + V AF ED LR+LR RF++ LGF I T + ++ L Sbjct: 181 ADLQHKRIVCVGDAFARLNEDILRILRALRFSS---TLGFEIDFHTKEAIFSLSSKVCL- 236 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGI 230 + ER+ E L +V R + EI + + Sbjct: 237 -IAKERIRVEFTKLLCGAWVKVVLDE------FRFVISEI-----LSQMREIIANNTLWQ 284 Query: 231 HTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRV 290 HTL L + + + + Q L+ Sbjct: 285 HTLSILDNLT--PRSHTLAWVAFLYH-------------------TDELKARDILQSLKF 323 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR-VEQLALTSEADVRGR 349 +D + + + + + + +K + + + A + + Sbjct: 324 DTYNKDYICSLLVYVKKPLNNNLTT---LKTMLVDMGGRKKGEAMFKDMLKLKVAVINAQ 380 Query: 350 TGFESADYPQ-GRWLREAWEVAQS-----------VPTKAVVEAGF-KGVEIREELTRRR 396 + A Q + E + + + ++ G KG I E L Sbjct: 381 DTADKAQKLQMLDSIHSLLECVLASSVPLELKELCLNGRDLIYIGVPKGKRIGEILHFLH 440 Query: 397 IAAV----ASWKEQRCPKPE 412 + ++ KE K + Sbjct: 441 QEVLHERVSNTKEALLSKAQ 460 >UniRef50_C0M731 CCA-adding enzyme n=4 Tax=Streptococcus dysgalactiae group RepID=C0M731_STRE4 Length = 404 Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats. Identities = 93/410 (22%), Positives = 145/410 (35%), Gaps = 61/410 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLH--PQTHE 56 + Y VGG+VRD+LL P+ D D P+E + + G + L + Sbjct: 26 FEAYFVGGSVRDSLLNRPIHDVDIAA-SCYPEETKAIFLRTIDVGIEHGTVLVLENGSEY 84 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE +LE+DLKRRD T+NALA D++G++ID +NGL DL Sbjct: 85 EITTFRTEDVYVDYRRPSQVSFVR--SLEEDLKRRDFTVNALALDEDGQVIDIFNGLEDL 142 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +++LLR V F ED LR++R RFAA L F I ET M+ +HA LE ++ Sbjct: 143 KHKLLRAVGRPQERFEEDALRIMRGFRFAA---SLDFDIEAETFEAMK--SHAPLLEKIS 197 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER + E + L + + C A L P + Sbjct: 198 IERSFIELDKLLMAPKWRKGILAMVACQAFNYL-PGLVGKEEALQK-------------Y 243 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 + A + +A L L + + + + N+ Sbjct: 244 LKTLAADYVFQDNHQAWAYLLVMLE-------------------LDQPKAFLKAWKTSND 284 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 + ++A + I L I + V+ L + Sbjct: 285 FQRRVTMMASLY-QIRQERQLEKWDIYSFGKDL-----ALLVDDLRQAQGLVSEAKRVES 338 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVV-EAGFK-GVEIREELTRRRIAAVA 401 + V ++ E G K G ++ L + A V Sbjct: 339 LYQELTIHDKHDIV-----VNGSYLIRELGMKPGPQLGMLLNQIEQAIVE 383 >UniRef50_B8KRY4 Poly(A) polymerase n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KRY4_9GAMM Length = 432 Score = 247 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 96/393 (24%), Positives = 142/393 (36%), Gaps = 44/393 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY--QQVGRDFPVFLHPQ--THEE 57 + Y+VGGAVRD LLG KD D V +TP+++ + +GR F + E Sbjct: 33 EAYIVGGAVRDLLLGGQPKDFD-VGTNATPEQIKAVFKNARIIGRRFQIVHVRFGPEIIE 91 Query: 58 YALAR-----------------TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQ 100 R T+ S G TLE+D RRDLTINAL Sbjct: 92 VTTYRGHHASGSAPASGKDSGNTKAHSRQSDKGLLLRDNVYGTLEEDAARRDLTINALYY 151 Query: 101 DDNGE-IIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADET 156 D E ++D NG+ D++ RL+R + + EDP+R+LRV RFAA+ L F + ET Sbjct: 152 DPEDESVLDQLNGMADVEARLVRVIGEPHTRYREDPVRMLRVLRFAAK---LQFDVESET 208 Query: 157 LALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGV 216 + E A L + R++ E F++L G L LFPE + Sbjct: 209 DHAIAEC--APLLAEIPSARLFDEFLKLFMAGYATPTFKLLYRYGLLHHLFPEPTRVLAH 266 Query: 217 PAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPE---LWPRHHGH 273 A H E+ + A + + + Sbjct: 267 EAR---HYELVVAAMESTDRRVREDRPVTPAFLLAAIMWPVVQERAAELIHAGETAIPAF 323 Query: 274 GPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQ 333 +G ++V ++C +P + + E D PK I L A R+ + Sbjct: 324 HSSGQQVVAEVCVHTAIPK---RFSLPMREMWDFQPKLERRQPKQIKSLL----ASRRFR 376 Query: 334 RVEQLALTSEADVRGRTGFESADYPQGRWLREA 366 L L EA Q + Sbjct: 377 AAYDLLLLREASGEKLNDCGQFWTEQQEIYPDL 409 >UniRef50_C7LTC9 Poly(A) polymerase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LTC9_DESBD Length = 424 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 87/359 (24%), Positives = 137/359 (38%), Gaps = 24/359 (6%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ--QVGRDFPVFLHPQTHEEY 58 YLVGG VRD LLG KD D V +TP ++ +GR F + Sbjct: 34 FTAYLVGGGVRDLLLGRTPKDFD-VSTNATPSQIKKIFQNYFLIGRRFRLAHIRFDDHVI 92 Query: 59 ALARTERKSGSGY-----TGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNG 112 + R + T E+D RRD TIN L + + IID G Sbjct: 93 ETSTFRRCPDQEEENGDEDLYMLRDNCYGTPEEDALRRDFTINGLFYEVERFSIIDHVGG 152 Query: 113 LGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 L D++NRL+R + F EDP+R++R RFAAR L F I T + M H E+ Sbjct: 153 LSDIENRLIRCIGDPNIRFREDPVRMIRAVRFAAR---LDFHIEPATYNAI--MRHHEEI 207 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 +P RV++E + + + ++L G L L PEI + Sbjct: 208 LKASPPRVFEELQKLFAYGSGEKAVRLLYKTGLLHNLLPEIADFLDHD-HGQDSILWTWL 266 Query: 230 IHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPP-ELWPRHHGHGPAGVKLVEQLCQRL 288 H + + + + FA L + + E + L++ +C R+ Sbjct: 267 EHLDRRIRTVGKV--EPVLVFAALFSAPVRHIAARYEADGERVVYNAMLEDLLQPICVRM 324 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQL-ALTSEADV 346 +P + + P + + F + + + + + QL L S AD+ Sbjct: 325 SMPKWMCSRMIQIMANQTRFE--PDKKKRFSKRGFVAHECFPETLALYQLGLLVSGADL 381 >UniRef50_A8SDN5 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SDN5_9FIRM Length = 444 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 93/438 (21%), Positives = 144/438 (32%), Gaps = 99/438 (22%) Query: 9 AVRDALLGLPVKDRDWVVVGSTPQEMLDAG----YQQVGRDFPVFLHPQTHEEYALARTE 64 VRD+LLG D D + PQ++++ G + Y T Sbjct: 29 CVRDSLLGRTAHDWDLC-TSALPQQVMELFGTEQCIPTGLQHGTVTIKYGGQLYET-TTF 86 Query: 65 RKSGSGYTGFTCYAAPDV-TLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLLRH 123 R GS G A V + +DL RRD TINA+A + ++DP+ G DLQN LLR Sbjct: 87 RTEGSYTDGRHPDAVQFVPDVREDLARRDFTINAMAYNAAEGLVDPFGGQKDLQNGLLRA 146 Query: 124 VSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 V F ED LR+LR+ RFAAR+ GF + T R++ A L+ ++ ER+ +E Sbjct: 147 VGEPQQRFTEDALRILRLYRFAARF---GFTLDAATARAARQL--APHLDCISAERIQEE 201 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAA 240 L P + + L V+ PE+ + Sbjct: 202 LAKLLVAPQPGAYLEPA----VLAVVLPELTPA--------------ALEAAKPVVDACP 243 Query: 241 MLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARL 300 + VR+A L LG+ T ++ +RLR N + + Sbjct: 244 AGEENLPVRWAALLGTLGEADT-------------------RRVLKRLRCSNACIEETAV 284 Query: 301 VAEF-------------HDLIHTFPMLNPKT-------------------------IVKL 322 + H+ H+ + +L Sbjct: 285 LVRETAGEGVCGSFLLGHESGHSIARPTACGSRVPPQRTVLGETPAHAPERASDIHLRRL 344 Query: 323 FDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLRE----AWEVAQSVPTKAV 378 VE+L A + + R L +V + + Sbjct: 345 LGRYGLC----TVERLCALCAALRPQAAPACALAAQRARQLEADGVCCRVRQLAVNGRDL 400 Query: 379 VEAGFK-GVEIREELTRR 395 + AG G +R L Sbjct: 401 MAAGIPAGPALRRVLEAL 418 >UniRef50_B1MYC1 CCA-adding enzyme n=7 Tax=Lactobacillales RepID=CCA_LEUCK Length = 403 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 82/416 (19%), Positives = 141/416 (33%), Gaps = 63/416 (15%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLH--PQTHE 56 + Y VGGAVRD LL P+ D D + + P+E+ + V G + Sbjct: 25 FEAYFVGGAVRDMLLNKPIHDVD-IATSAFPEEIKALFTKTVDTGIQHGTVMVLDHGDGY 83 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE +L +DLKRRD TINA+A +G+IID ++GL D+ Sbjct: 84 EITTFRTESTYTDFRRPDKVTFVR--SLAEDLKRRDFTINAIAMTKDGDIIDLFDGLTDM 141 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + +R V F ED LR++R RF+A+ LGF IA T A ++++ LE + Sbjct: 142 AQKRIRAVGDAEVRFNEDALRIMRALRFSAQ---LGFDIAPHTKAALKQIGR--NLEKIA 196 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E E L + V + +R L H + + + Sbjct: 197 VERIRVEFEKLLMGQYASNSLSVAIEADLIRYL--------------PGHIKKEDWLTIT 242 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 L + +WP + ++ + + E Sbjct: 243 ADLKR-------------------NQPQARTVIWPYFLSRLSLRLNELQLFMRSWKTSRE 283 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 + P++ V +F+ + + ++ + + Sbjct: 284 DMRAVLSIV---------PIVKHVQTVSVFELYAIYDYQALLFEVLTLIGTPLATQ---- 330 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVVEAGF--KGVEIREELTRRRIAAVASWKEQR 407 L + ++ G ++ LT+ A + R Sbjct: 331 QRVKQIFDALPITHNRDMCISGGDLLANNIVTPGPQMGRILTQLEHAVIQRIISNR 386 >UniRef50_Q834S5 CCA-adding enzyme n=40 Tax=Bacilli RepID=CCA_ENTFA Length = 406 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 89/414 (21%), Positives = 139/414 (33%), Gaps = 61/414 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTH--E 56 + Y VGG+VRDALL P+ D D + + P+E+ + V G + L Sbjct: 25 FEAYFVGGSVRDALLNKPIHDVD-IATSAYPEEIKQIFKRTVDVGIEHGTVLVLMEDQQY 83 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE +L++DLKRRD TINALA D GEIID ++G+ DL Sbjct: 84 EVTTFRTESTYQDFRRPDEVTFVR--SLKEDLKRRDFTINALALDSTGEIIDLFDGIEDL 141 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 N+ +R V F ED LR++R RFA++ L F+I ++TLA + E LE ++ Sbjct: 142 TNQTIRAVGNPHERFHEDALRMMRGLRFASQ---LDFKIEEKTLAAIAEF--HPLLEKIS 196 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E L N Q + + Sbjct: 197 VERITIEFVKMLLGVNRQGGLAPFIETECYQY---------------------------- 228 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 L Q F + + T E W + + ++ N+ Sbjct: 229 -----CPKLREQGAGLFRLMDLPARQIETEAEAWTLLIQSLNLPEAEIRSFLKAWKLSNQ 283 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 + + P + +L VE+L + Sbjct: 284 LIQNVSQLVRG-LRFRLSNDWQPMMLYEL-----GEESAVLVERLLY-----YYQQESQV 332 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVVE--AGFKGVEIREELTRRRIAAVASWKE 405 + L ++ K ++ G + E + V E Sbjct: 333 QVTKELVKALPIHQRHELAITGKDLLAVLEETPGKWLGELIAEIEQHVVEGSLE 386 >UniRef50_D0B9N2 Polynucleotide adenylyltransferase n=54 Tax=Rhizobiales RepID=D0B9N2_BRUME Length = 423 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 91/412 (22%), Positives = 140/412 (33%), Gaps = 51/412 (12%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHE----E 57 + +VGGAVR+ LLG V D D P+E + + + P + T Sbjct: 32 EARVVGGAVRNTLLGTGVSDVDLATTH-LPEETVRLASEAGFKPVPTGMEHGTITVVVQG 90 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 Y T + G A + D +RRD TINAL +G +ID GL D++ Sbjct: 91 YPFEVTTLRRDIETNGRHAKVAFGTDWKADAERRDFTINALYVTADGTVIDQVGGLADIE 150 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 R LR + ED LR+LR RF A Y E L + L+ Sbjct: 151 TRTLRFIGDAEQRIREDYLRILRFFRFFAWYGSGR----PEAEGLRASARLKDGIAQLSA 206 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+W E + L +P +R G L ++ PE +G+ A IH L+ Sbjct: 207 ERIWSEMKKLLGAPDPSRALLWMRQAGVLNLVLPE-SEKWGIDA-----------IHGLV 254 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 +R + L PP+ +E+L +R+++ N Sbjct: 255 RTQSDLGWQADPLLRL--------ESLVPPD------------AVRMEELGKRMKMSNAE 294 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 R A + P L+ + + K R+ + + G Sbjct: 295 RARLEAWARADAV---KPGLSEQALKKAIYRGSKQALLDRIRLAYAAARQEAVGSDEAMI 351 Query: 355 ADYPQGRWLREAWE---VAQSVPTKAVVEAGF-KGVEIREELTRRRIAAVAS 402 R L A + ++ G KG + E L + S Sbjct: 352 RAGGVARLLDAAEHYDAPVFPITGGDLLARGIEKGPGLGETLRSLETLWIDS 403 >UniRef50_B9Y2T0 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2T0_9FIRM Length = 416 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 85/405 (20%), Positives = 141/405 (34%), Gaps = 53/405 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQT----HEE 57 + + VGG VRD LLG PV+D D V + P++ + P L T ++ Sbjct: 22 EAWWVGGCVRDTLLGRPVQDVD-VTTSALPEQTIVCFRNAGYPVIPTGLKHGTVTVMIQD 80 Query: 58 YALARTERKSG-SGYTGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 + T +S +L +D RRD TINAL + + D ++G D Sbjct: 81 IPIEVTTYRSDSDYQDHRHPESVRFTRSLWEDCARRDFTINALCWHPDLGLRDYFHGQRD 140 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L+N+++ + F ED LR+LR RFA+ LGF + T + L L Sbjct: 141 LKNKVIACIGNPYQRFDEDALRILRALRFAS---TLGFALDLGTRQAL--FHQEELLRVL 195 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHT 232 + ER+ +E E + F + L VLFP++ AL P DT Sbjct: 196 SAERIAREMEKMVVGLRWPEIFA--NNYEILAVLFPQLPALQS---PQAIQKAFDTF--- 247 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 P R A L TP H +L+ N Sbjct: 248 -------RFCPPVTLPRLACFF--LETEQTPLVYCIDQALH----------WTGQLKFSN 288 Query: 293 EIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGF 352 + + + + + ++ ++L P R + +A R Sbjct: 289 QNKKNLIQLVRYQNHPIPQDRVS----LRLL----IHELPDRFGEWIQLQQALNRLTPEQ 340 Query: 353 ESADYPQGRWLR--EAWEVA-QSVPTKAVVEAGFKGVEIREELTR 394 + +R + + ++ ++ AG +I L + Sbjct: 341 AAHLIAASEEIRGHDCLTLKQLAINGADLIAAGCPRPQISALLKQ 385 >UniRef50_Q39QS9 Poly(A) polymerase, PcnB n=5 Tax=Desulfuromonadales RepID=Q39QS9_GEOMG Length = 457 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 95/423 (22%), Positives = 142/423 (33%), Gaps = 63/423 (14%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFPVFLHPQTHE--EY 58 YLVGG VRD LLG KD D V +TP ++ + VGR F + E E Sbjct: 42 AYLVGGCVRDLLLGREPKDFD-VATNATPNQVKRLFRNCRLVGRRFRLAHIHYQDEIIEV 100 Query: 59 ALART----------------ERKSGSGYTGFTC-----------YAAPDVTLEDDLKRR 91 A R E G G T E+D RR Sbjct: 101 ATFRALAPEEPEDTAPAPVSPENVPGEGERPRLPRHVVSDEGMVLRDNVFGTPEEDAVRR 160 Query: 92 DLTINALAQDD-NGEIIDPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAH 147 D T+NALA + + IID NG+ DL+ ++R + F EDP+R+LR RFAA Sbjct: 161 DFTVNALAYNIADFSIIDYANGMEDLRRGVIRTIGDPLVRFTEDPVRMLRAVRFAA---T 217 Query: 148 LGFRIADETLALMREMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLF 207 LGF + D T +RE+ A + T R+++E + + +Q+LR G LF Sbjct: 218 LGFTVEDATWQAIREL--APAITRATAPRLYEEVLKLFLSGEGERVYQLLRQAGLFSHLF 275 Query: 208 PEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELW 267 P A H ++ + + + A + + + Sbjct: 276 PRFSAWLDREIDGFPHSQVGKALEWADD-QVGGGEPVSPPLLLALMFGEYVEERAAELAD 334 Query: 268 PRHHGHGPAGVKLV---EQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFD 324 + + + +P I R + + P P+ + Sbjct: 335 AGMPVPDAVNAAMAGFLGEQAPIIAIPQRIALAVREILLIQHRLRKIPGKRPQGV----- 389 Query: 325 SIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK 384 LA + A+ A +G + WE VE Sbjct: 390 -------------LARSCFAEALAYLRCRCAVTGEGGKILAWWERYARESVMPPVEPATG 436 Query: 385 GVE 387 G E Sbjct: 437 GGE 439 >UniRef50_Q043S5 CCA-adding enzyme n=7 Tax=Lactobacillus RepID=CCA_LACGA Length = 398 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 83/408 (20%), Positives = 133/408 (32%), Gaps = 61/408 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHE--E 57 + Y VGG+VRD LL + D D + + P E+ + + G E E Sbjct: 26 EAYFVGGSVRDLLLNRHIHDVD-IATSAYPMEIKQIFKKTIDTGIKHGTVTVLYEGESYE 84 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RTE L +DLKRRD TINALA +G +ID ++GLGDL Sbjct: 85 ITTFRTESGYQDFRRPDHVTFV--QNLSEDLKRRDFTINALAMGVDGNVIDHFDGLGDLD 142 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 L+R V F ED LR++R RF ++ L F + ET + + + L ++ Sbjct: 143 KHLIRAVGKAENRFHEDALRMMRAVRFMSQ---LQFTLEPETERAISD--NHELLSKISV 197 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E Q FQ+ D G + P Sbjct: 198 ERIRDEFVKMGIAPGSQKAFQIFLDTGLSEEV-PGFKGKKD------------------- 237 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 A T LW + + + + N + Sbjct: 238 --------------NLALYPQLNFSPTTEANLWALMIILLKLPNEKIPSFMRMWKNSNAM 283 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + F DL+ + + L+ + + + A + G+ S Sbjct: 284 ERQVADIVTFFDLVSS----RAPSNYDLYQA-----GLETIASTIDL--AHILGQPINGS 332 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVA 401 A + L + +++ G G + L + A + Sbjct: 333 ALVDRYEALPIKNNHDLVIDGHFLLKNGVPAGPRVGLLLEEIKKAVLE 380 >UniRef50_B8EDX6 Poly(A) polymerase n=5 Tax=Shewanella RepID=B8EDX6_SHEB2 Length = 513 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 81/384 (21%), Positives = 143/384 (37%), Gaps = 29/384 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFP--VFLHPQTHE 56 K YLVGG VRD LLG+ KD D VV +TP+E+ + VGR F + + Sbjct: 92 FKAYLVGGGVRDLLLGIEPKDFD-VVTNATPEEIKKLFRNCRVVGRRFRLAHIVFGRDVI 150 Query: 57 EYALAR------TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDP 109 E A R E+ S + G +++D +RRD T+NAL D + I Sbjct: 151 EVATFRGHHGESNEKVSKANAEGRLLRDNVYGEIDEDAERRDFTVNALYYDISDYSIRSY 210 Query: 110 YNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 G+ DL+ LR + + EDP+R+LR RFA + L I T A ++++ A Sbjct: 211 GGGMTDLKAGTLRLIGDPETRYREDPVRMLRAVRFATK---LNMGIETVTAAPIKQL--A 265 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 L+ + R+++E F+++++ LFP++ AL + Sbjct: 266 PLLKDIPAARMYEEVLKLFFAGKALANFELMQEYKLFAPLFPQVAALLKDDPKGTTMKMV 325 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCHDL----GKGLTPPELWPRHHGHGPAGVKLVE 282 + + + +A L + + + A ++E Sbjct: 326 QAIMKS-TDQRVNEDKPVTPSFFYAALLWYPLRQRAEDIAVESGLTLYDAFFAAMGDVME 384 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTS 342 Q CQ + +P A+ + + +++ +R + L Sbjct: 385 QQCQTISIPRRFSTPAKDIWQLQLRFDRSQGTRAFKLME----HPKFRAAYDLLLLRGEV 440 Query: 343 EADVRGRTGFESADYPQGRWLREA 366 EA ++ + + Sbjct: 441 EAGNVAKSAAWWQQFVEADETERL 464 >UniRef50_C2E651 tRNA CCA-pyrophosphorylase n=1 Tax=Lactobacillus johnsonii ATCC 33200 RepID=C2E651_LACJO Length = 407 Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats. Identities = 88/408 (21%), Positives = 132/408 (32%), Gaps = 61/408 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHE--E 57 + Y VGG+VRD LL + D D + + P E+ + V G E E Sbjct: 35 EAYFVGGSVRDLLLNRHIHDVD-IATSAYPMEIKQIFKKTVDTGIKHGTVTVLYEGESYE 93 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RTE L +DLKRRD TINALA D +G IID ++GLGDL+ Sbjct: 94 ITTFRTESGYQDFRRPDHVTFV--QNLSEDLKRRDFTINALAMDVDGNIIDHFDGLGDLE 151 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 L+R V F ED LR++R RF ++ L F + ET + + + L ++ Sbjct: 152 KHLIRAVGKAENRFHEDALRMMRAVRFMSQ---LQFTLEPETEQAISD--NHELLSKISV 206 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E Q FQ+ D G + P Sbjct: 207 ERIRDEFVKMGIALGSQKAFQIFLDTGLSEEV-PGFRGKKE------------------- 246 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 A LW + + + N + Sbjct: 247 --------------NLALYPQLNFSPTNEANLWALMIILLKLPNDKIPHFMRMWKNSNAM 292 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + F DLI + N ++I ++ A + G+ S Sbjct: 293 ERQVADIVAFFDLISSHAPNNYDLYKAGLETI-----------VSTIDLAHILGQPINGS 341 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVA 401 A L V +++ G G + L + A + Sbjct: 342 ALVDSYEALPIKNNRDLVVDGHFLLKNGIPAGPRVGLLLEEIKKAVLE 389 >UniRef50_C0GDZ3 CBS domain containing protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDZ3_9FIRM Length = 873 Score = 244 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 105/416 (25%), Positives = 156/416 (37%), Gaps = 59/416 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR-----DFPV---FLHPQ 53 K++ VGG +RD LL + D D VV + + GR F L Sbjct: 474 KVFAVGGFIRDLLLNIKNHDLDLVVEPAAIPFAEELNKMLGGRLTSHEKFGTASIVLPEG 533 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDP 109 H + +R E +L++DL RRD TIN LA N G++ID Sbjct: 534 IHIDLVTSRQEFY----ARPAALPEVEQSSLKNDLFRRDFTINTLACSLNSPGFGKLIDL 589 Query: 110 YNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 +NG+GDL+ L+R + +F EDPLRVLR RF R+ GFR+ + TL+LM Sbjct: 590 FNGIGDLEKGLIRVLYNLSFVEDPLRVLRAIRFEQRF---GFRLEETTLSLMENAAQTRV 646 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 LE ++ ER+ E AL ++FP I + E+ Sbjct: 647 LEKVSKERLHDELVLALQEEKAPEILIRYFTLNIAPMIFPGIRLSDALQERLFAAREMCY 706 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRL 288 A P +V P A + +C+RL Sbjct: 707 W---------ANRNWPDTEV--------------VPGNLYLAALLLEAPFQEARHICRRL 743 Query: 289 RVPNEIRDLARLVAEFHDLIHT---FPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEAD 345 R+P + R+ E + L P + +LF Q VE L L +AD Sbjct: 744 RLPQKQREPILAAVEAVPRLKEKLLANALKPSELYRLFSG-------QPVETLLLL-QAD 795 Query: 346 VRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAV 400 + +ES + + + + + E GFK G +E L+ R A + Sbjct: 796 SKQSRIWEST----ALYWEKLRHIQPHISGHDLRELGFKPGPGFQEVLSHIRAARL 847 >UniRef50_Q5ZVA2 Poly(A) polymerase I n=4 Tax=Legionella pneumophila RepID=Q5ZVA2_LEGPH Length = 436 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 81/355 (22%), Positives = 139/355 (39%), Gaps = 24/355 (6%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY--QQVGRDFP--VFLHPQTHE 56 + Y+VGG+VRD LL KD D + +TP E+ + + +GR F L + Sbjct: 46 FQAYIVGGSVRDLLLHKAPKDFD-IATNATPNEVKNLFKNARIIGRRFKLVHILFHREII 104 Query: 57 EYALARTERKSGSGY----TGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYN 111 E A R S + + G +L++D RRD TIN+L + + IID Sbjct: 105 EVATFRGHNSSDASHQFNERGMLVRDNVYGSLDEDAWRRDFTINSLYYNISDSSIIDFTG 164 Query: 112 GLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G+ D++ +L+R + + EDP+R+LR RF+A+ L F ++ ET A +++H Sbjct: 165 GVEDVKQKLIRIIGDPVTRYQEDPVRMLRAVRFSAK---LQFNLSPETKAPFPKISH--L 219 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 + H++ R++ E + ++L + G LFP+ ALF P I Sbjct: 220 ITHVSSSRLFDEITKLYQCGEAESVQKLLVEYGLFNYLFPQTAALFDSHYPVNPLLGI-A 278 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLG-KGLTPPELWPRHHGHGPAGVKLVEQLCQR 287 +T + ++P + + P A ++ + Sbjct: 279 LENTDTRIRDGKPVTPAFLIAVLLWFPMIECSRKLQESGLPPLPSIEKAMSIVLSEQNAI 338 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTS 342 + +P + R E L + F L +R L S Sbjct: 339 ISIPKRYSQVIR---EIWLLQYRFEKRFGGRAFNLLLH-PRFRAAYDFMALRALS 389 >UniRef50_B2A4Y6 CBS domain containing protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4Y6_NATTJ Length = 890 Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats. Identities = 90/417 (21%), Positives = 156/417 (37%), Gaps = 51/417 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG--RDF------PVFLHP 52 K+Y VGG +RD LLG D D V+ G + F + L Sbjct: 487 FKVYGVGGFIRDLLLGKDNLDIDLVIEQDAISFAKLVSKHLNGDLKTFSQFQTARLTLRS 546 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIID 108 T ++A AR E + T++ DL RRD TIN LA + N G+++D Sbjct: 547 GTRIDFATARIEYY----AFPAASPEVEESTIKQDLYRRDFTINTLAVELNCNSFGKLLD 602 Query: 109 PYNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 + G DL+ ++R + +F EDP R+ R RF +R+ F I ++TL ++ G Sbjct: 603 FFGGTKDLKKGVIRVLYNLSFVEDPTRIFRAIRFESRF---NFNIEEQTLIFIKNSLETG 659 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 L+ L ER+++E + + F+ + + G +FP ++ + +I Sbjct: 660 VLDKLPGERLYEELRNIVDEDEAVNTFRRMDELGIFTKIFPNLNVSQDKLVKLQNIYDIL 719 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQR 287 +S + V F+ L D + ++ + +R Sbjct: 720 NWYERENKQKQEKFVSKEAMV-FSCLLQD-------------------QPLPIISSILER 759 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 L+VP +IRD+ + + + + K +S + + L AD Sbjct: 760 LKVPQKIRDVIITTVKETESLSSKLEYTEK------NSELVQNLEEIPLETILFVLADKE 813 Query: 348 GRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVASW 403 + Y +L E S+ + + G K G + L R A + Sbjct: 814 NQKIKNKIYY----YLEELIGAGVSITGEDLKTLGIKPGPVYKTALEEVRKARLDGL 866 >UniRef50_C4L927 Poly(A) polymerase n=2 Tax=Gammaproteobacteria RepID=C4L927_TOLAT Length = 521 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 84/380 (22%), Positives = 146/380 (38%), Gaps = 30/380 (7%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFP--VFLHPQTHEEYA 59 YLVGG VRD LLG KD D VV + P+++ + +GR F + + E A Sbjct: 103 YLVGGGVRDLLLGKIPKDFD-VVTDAHPEQIRKLFNNCRLIGRRFRLAHIVFGRDIIEVA 161 Query: 60 LAR--------TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPY 110 R ++ + G T+E+D +RRD T+NAL + + + D + Sbjct: 162 TFRGHHHQVNTSKNIAEQSEEGMLLRDNVYGTIEEDAERRDFTVNALYYNIKDFSLHDFH 221 Query: 111 NGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 GL DL L + + EDP+R+LR RFAA+ LG I+D + + + A Sbjct: 222 GGLNDLAAGKLELIGDPETRYREDPVRMLRAVRFAAK---LGLTISDRSAEPISRL--AP 276 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 L+ + R+++ET + +Q+LR G + LFP+ L + + ++ Sbjct: 277 LLQDIPSARLFEETIKLFLAGHALSTYQLLRKFGLFQQLFPQAAKLLTPDNNSAYERFLE 336 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDL----GKGLTPPELWPRHHGHGPAGVKLVEQ 283 + +A +ATL + + ++ P A + +EQ Sbjct: 337 KAL-ANSDKRVATEQPVTPTFFYATLLWGVVAMRQREISNESNLPYLDSMQMAMNEAIEQ 395 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIV---KLFDSIDAWRKPQRVEQLAL 340 R+ +P R + + + + + + K + D VE Sbjct: 396 QIHRVAIPRRFTSDVREIWLLQERLPRYSGKRAEKLFAQPKFRAAFDFLELRAHVEPRLR 455 Query: 341 TSEADVRGRTGFESADYPQG 360 A + P+ Sbjct: 456 DIVAWWQDYQQTHDFIRPEH 475 >UniRef50_C7H286 Metal dependent phosphohydrolase n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H286_9FIRM Length = 464 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 95/462 (20%), Positives = 150/462 (32%), Gaps = 104/462 (22%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG----YQQVGRDFPVFLHPQTH--E 56 Y VGG VRD+LLGL D D + P++++ G Q Sbjct: 24 AYAVGGCVRDSLLGLDPHDWDLC-TSARPEQVMALFGEEKCIPTGLQHGTVTVKQGGRLY 82 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE G P+V +DL RRD TINA+A +IDP+ G DL Sbjct: 83 ETTTFRTEGAYSDGRHPDAVCFVPEV--REDLARRDFTINAMAYSAEEGLIDPFGGRDDL 140 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +R V F ED LR+LR+ RFAAR+ GF I T R + L+ ++ Sbjct: 141 AAHRVRAVGEPERRFEEDALRILRLYRFAARF---GFAIDPATGVAARAL--GPHLDCVS 195 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ +E L P + + L V+ PE++ + + Sbjct: 196 AERIQEELLKLLAAPRPGSYLEPA----VLAVILPELEP----------EKQPERFAELC 241 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 T+ V R A L LG+ + ++L+ N Sbjct: 242 RTIDRIEPTVENVPARLAALLCPLGEAG-------------------ARKALRKLKCSNA 282 Query: 294 IRDLARLVAEF-----------HDLIHTFPML---------------------------- 314 + D + H+ H+ Sbjct: 283 LTDEVTALEREAGGGAGSFLLGHESGHSIARPIACGNRVPPQRTVLGETPDTPVQTPCVT 342 Query: 315 ---------NPKTIVKLF-DSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLR 364 P + L + + +++L A +TG +A + L Sbjct: 343 PVSEEEAPGTPGSDQTLMAKRLLGRYELPTIQRLTALCSARHPEQTGAFAALRAEAERLT 402 Query: 365 EAWEVA----QSVPTKAVVEAGFK-GVEIREELTRRRIAAVA 401 +V + ++ AG + G +R+ L A + Sbjct: 403 AENACCRVSQLAVNGRDLMAAGVRPGPGLRQVLNALLEAVIT 444 >UniRef50_B5JS56 Poly(A) polymerase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JS56_9GAMM Length = 434 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 87/377 (23%), Positives = 137/377 (36%), Gaps = 40/377 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG--YQQVGRDFP--VFLHPQTHEE 57 + YLVGG VRD L+GL KD D V +TP E+ + VGR F L + E Sbjct: 41 EAYLVGGCVRDLLIGLRPKDFD-VATSATPDEVKALFRNCRLVGRRFRLAHILLGRDFIE 99 Query: 58 YALARTERKS-------GSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDP 109 A R ++S +G +LE D RRD ++NAL D + I+D Sbjct: 100 VATFRAGQESAGKKQAVAHSDSGRILSDNVYGSLEQDAFRRDFSVNALYFDVRDESIVDY 159 Query: 110 YNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHA 166 + D++ R LR + + EDP+R+LR RFAA+ LGF I T A +RE+ + Sbjct: 160 VGAMADIEARQLRLIGDPDTRYREDPVRMLRAVRFAAK---LGFSIEPHTEAPIREL--S 214 Query: 167 GELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEI 226 LE + P R++ E L + + L LR L P W + Sbjct: 215 DHLEDIPPARLFDEVIKLLQSGHGVASLDGLWQHDLLRYLLPMTYGSLLTERGDHWRRML 274 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKG-------LTPPELWPRHHGHGPAGVK 279 + ++ +A S +A L + P + P A + Sbjct: 275 EQALNNTDA-RLAQGKSTNPAFLYAVLLWPPLREWLIETGGAMPEDGAPPVMQIQEAANE 333 Query: 280 LVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK-----------LFDSIDA 328 + ++ +P + R + + + ++ L Sbjct: 334 IFDRQIHYTAIPKRFSQMIRDMWSLQHKLENYGGGRAFGLLANKRFRAAYDFLLLREEMG 393 Query: 329 WRKPQRVEQLALTSEAD 345 +R E D Sbjct: 394 ENTKERANFWTQIQELD 410 >UniRef50_B0BS81 PolyA polymerase n=23 Tax=Gammaproteobacteria RepID=B0BS81_ACTPJ Length = 510 Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 72/341 (21%), Positives = 133/341 (39%), Gaps = 27/341 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG---YQQVGRDFP--VFLHPQTH 55 + Y+VGG +RD LLG KD D V + P+E+ + +GR F + + Sbjct: 99 FEAYVVGGCIRDLLLGHKPKDFD-VATNAKPEEIQKIFGRQCRLIGRRFRLAHIVFGRDI 157 Query: 56 EEYALAR-------TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEII- 107 E A R +++ S G TL +D +RRD ++N+L D +I Sbjct: 158 YEVATFRADHASHNSDKISKVSEEGMLLRDNVYGTLREDAQRRDFSVNSLYYDPKHNLIF 217 Query: 108 DPYNGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMT 164 D ++G+ DL+ LR + + EDP+R+LR RF A+ L + + +RE+ Sbjct: 218 DFFDGITDLKAGKLRLIGDPVVRYQEDPVRMLRAVRFMAK---LDMFLDKPSDTPIRELA 274 Query: 165 HAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHP 224 H L+++ R++ E+ + +Q++R G LFP + F + Sbjct: 275 H--LLKNIPAARLFDESLKLFQSGQGFKTYQLMRQYGLFEQLFPVLTPFFTERNDSNAER 332 Query: 225 EIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDL----GKGLTPPELWPRHHGHGPAGVKL 280 + +++ L FA L + L H A + Sbjct: 333 MLSKALNSTDDRIR-DNLRVNPAFLFAALLWYPLREKMEVLKNEGGLNSHDAMMLAANDV 391 Query: 281 VEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVK 321 + + C+ + + + R + + P+ ++ Sbjct: 392 LAESCKAIALHRRHTSVIRDIWALQFQMTKRSGKRPQQTLE 432 >UniRef50_A4J3L2 Polynucleotide adenylyltransferase region n=4 Tax=Peptococcaceae RepID=A4J3L2_DESRM Length = 907 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 90/424 (21%), Positives = 143/424 (33%), Gaps = 56/424 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR-----DFPV---FLHPQ 53 ++Y VGG VRD LL + D D VV G+ + + GR F Sbjct: 478 QVYAVGGLVRDVLLKVENLDVDLVVEGNGIEMANELAKVIGGRVRPHEKFGTAEIIFPDG 537 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIIDP 109 + AR E +L+ DL RRD TINA+A N GE++D Sbjct: 538 YWVDVVTARVEYYE----YPAALPQVEQSSLKHDLYRRDFTINAMAVALNPERFGELVDY 593 Query: 110 YNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 +NG DLQN +R + +F EDP R+LR RF RY I +TL L++E Sbjct: 594 FNGREDLQNGAIRVLHNLSFIEDPTRILRAIRFEQRY---DMDIEPQTLRLIKEAVREKV 650 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 + L+ ER+W E + L +P+ L + G LFPEI EI Sbjct: 651 IARLSTERMWGELKHILEEADPEHMLDRLSELGVWDYLFPEIT----FWEVQYVISEIPQ 706 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRL 288 + L A + + + +CQR Sbjct: 707 ALMILRNWGWAEPAEKWLPYFLSI--------------------LHLTAQETAYTICQRY 746 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 + + + + + + I + E Sbjct: 747 NLGRRQTEKVLDTIAYGRVALRRLSATEEVPLSELTKIVQTLPREAYPMFLTLLE----- 801 Query: 349 RTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELT---RRRIAAVASWK 404 ++A + + +V K + + G++ G R L + R+ + + Sbjct: 802 ---DKNAIRRFRLVMESVNKNKPTVNGKDIRDMGYQPGPMYRRALDSVWQARLDGMVQTR 858 Query: 405 EQRC 408 E+ Sbjct: 859 EEEL 862 >UniRef50_A6NVT9 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVT9_9BACE Length = 392 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 99/426 (23%), Positives = 147/426 (34%), Gaps = 86/426 (20%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 + Y VGG VRD LLG D D V + P+E++ + V E+ + Sbjct: 26 EAYPVGGCVRDLLLGRTPGDWD-VTTSAMPEEVIALFDRTVPTGIRHGTVTVLTEDGGVE 84 Query: 62 RTERKSGSGY-TGFTCY-AAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 T ++ SGY G L DL RRD TINA+A +G +IDP+ G DLQ R Sbjct: 85 VTTFRAESGYADGRHPDAVTFGGDLTGDLTRRDFTINAMALGPDGAVIDPFGGQKDLQAR 144 Query: 120 LLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 L+R V F ED LR+LR RF+A+ LGF + + T +R+ +A L+ ER Sbjct: 145 LIRCVGEPGRRFREDALRMLRAVRFSAQ---LGFAVENATAEALRD--NAELTACLSAER 199 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + E E L ++ P+ + L G L G L Sbjct: 200 IRTELEKILLSQWPERG-EGLFAWGLLAAF---------------------VGADAQPDL 237 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 + + + R+A LC L ++ E+ + LR+ Sbjct: 238 TTLHRVPARPLERWAALCALL---------------LDEGSIRSAEEFLKDLRLDGRTVR 282 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 AE + + WR AD A Sbjct: 283 ACAAGAEL--------------VKTMPRGAAGWRHA------LAEHGADACTAAAAIGAA 322 Query: 357 YPQGRWLREAWE----------VAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 G +LRE E ++ + G++G +I R + Sbjct: 323 MMGGEYLRELAETLAEGSCLTVRELALSGAELAAMGYRGADIGAAQRRL--------LDH 374 Query: 407 RCPKPE 412 PE Sbjct: 375 VLDHPE 380 >UniRef50_B4KCB6 GI23728 n=11 Tax=Coelomata RepID=B4KCB6_DROMO Length = 450 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 78/409 (19%), Positives = 139/409 (33%), Gaps = 65/409 (15%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ-------VGRDFPVFLHPQT 54 ++ + GGAVRD L+ + KD D+ +TP++M + ++ G Sbjct: 63 ELRIAGGAVRDILMNIKPKDIDFATT-ATPEQMKEMFGKEEVRLINAKGEKHGTITPRIH 121 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 ++E T + G + D RRDLTIN++ +G + D + G Sbjct: 122 NKE-NFEVTTLRIDVRTDGRHADVVFTTDWQLDANRRDLTINSMFLGFDGTVYDYFYGYE 180 Query: 115 DLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DLQ R + V ED LR+LR RF R A TLA ++ +A L Sbjct: 181 DLQQRRVVFVGDADVRIKEDYLRILRYFRFYGRIAERPDCHDKATLAAIK--ANAVGLAR 238 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++ ER+W E + + + + +CG L+ HP ++ Sbjct: 239 ISGERIWAELQKIVVGNFNRELILEMNNCGLLQQC------------GLPIHPNLEEFER 286 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 + L H+ + + +L +RL++ Sbjct: 287 VCVDLKR---------------FHEPHYPILYLIGLLH-------SSEQAMKLHERLKLS 324 Query: 292 NEIRDLARLVAEFHDLIHT-FPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 RDLA + + + +++ + L KL A R D + Sbjct: 325 AYERDLALFITQQRERVNSEYVCLRDYQ--KLCLQPYAKR--------------DYVEQL 368 Query: 351 GFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAA 399 + L+E + + + G G ++ L R+ Sbjct: 369 LKYANKLELYAQLKEWQMPSLPINGNTLKPYGLAGKQVGVVLNELRLLW 417 >UniRef50_C6N7M1 Poly(A) polymerase (PAP) (Plasmid copy number protein) n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N7M1_9GAMM Length = 462 Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats. Identities = 76/357 (21%), Positives = 133/357 (37%), Gaps = 28/357 (7%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY--QQVGRDFP--VFLHPQTHE 56 + Y+VGG+VRD +L KD D V +TP ++ + + +GR F L + Sbjct: 71 FQAYIVGGSVRDLMLHKAPKDFD-VATNATPNQIKNLFRNGRIIGRRFKLVHVLFHREII 129 Query: 57 EYALARTERKSGSG----YTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYN 111 E A R+ G +L++D RRD TIN+L + + IID Sbjct: 130 EVATFRSHEAVDESQQTNERGMLVRDNAFGSLDEDAWRRDFTINSLYYNITDSTIIDFTG 189 Query: 112 GLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 G+ D+Q++L+R + + EDP+R+LR RF+A+ L F +A ET A ++++ Sbjct: 190 GVKDVQDKLIRMIGDPVTRYKEDPVRMLRAVRFSAK---LHFNLAPETEAPFPDISY--L 244 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 + H++ R++ E N + ++L G + L P+ AL Sbjct: 245 ITHVSSSRLFDEMTKLYQCGNAETVQKLLLQYGLFQHLCPQTTALLDS-QYPVNALLAIA 303 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLG---KGLTPPELWPRHHGHGPAGVKLVEQLC 285 +T + + FA A ++ + Sbjct: 304 LENTDIRIR--DDKPVTPAFLFAVFLWFPMIERSKQLQSAGMDPLPAVEKAMSLVIAEQN 361 Query: 286 QRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTS 342 + + +P + R E L + F L +R L + Sbjct: 362 KIISIPKRYTQIIR---EIWLLQYRFTKRAGGRAFNLLQH-PRFRAAYDFMALRALA 414 >UniRef50_C6E493 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=3 Tax=Geobacter RepID=C6E493_GEOSM Length = 416 Score = 240 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 109/413 (26%), Positives = 176/413 (42%), Gaps = 27/413 (6%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 +I+L GG VRD LLG+ +D D + G++ V ++ E++ Sbjct: 19 RIFLTGGMVRDFLLGVECQDIDLA-AAVPAAVLASLGFRLVESKSTPNIYFSYREDFGKI 77 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRLL 121 R L DL RRD +NA+A +G +IDP G DL+ R+L Sbjct: 78 EVTRLESVEE------------LTADLHRRDFRVNAMAMSLDGALIDPLGGKADLEKRVL 125 Query: 122 RHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKE 180 R +P + +DPLR+ R RF G+R+ E AL+ + + ER +E Sbjct: 126 RACTPASITDDPLRIFRAFRFECE----GWRLDGEAEALLASRDWSDAFASIPVERFSQE 181 Query: 181 TESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGV-PAPAKWHPEIDTGIHTLMTLSMA 239 AL P FF+ + + A R PE+ + V P + HPE D H++ L Sbjct: 182 MLKALAKPAPARFFRRMLEFQAGRNYLPEVFEMTQVIAGPPQHHPEGDLFTHSMQVLERM 241 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 A L+ V RF L HDLGK TP + P+HHGH G + C+RLR+P+ ++ + Sbjct: 242 AALTNDVTSRFCALFHDLGKLYTPKDQHPKHHGHAALGASAADAFCKRLRLPSALQRALK 301 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 ++ HD + + L T ++L K E L L AD G+ + + Sbjct: 302 ATSKLHDTANKWEELRDSTKIRLAVDA---VKGGIAEFLPLQVAADCGGKMP----GWEE 354 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASWKE-QRCPKP 411 + + + + ++++ + +RR+ + K + P P Sbjct: 355 ALRVAALNAAQLGIEPEMLDNKEVPPEKLQQIIMQRRVEELRRSKGVKTFPHP 407 >UniRef50_B5YFC2 Poly A polymerase, putative n=2 Tax=Dictyoglomus RepID=B5YFC2_DICT6 Length = 469 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 96/438 (21%), Positives = 170/438 (38%), Gaps = 58/438 (13%) Query: 4 YLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALART 63 Y+VGG +RD LLG +D D+++ + + GR EE R Sbjct: 24 YIVGGFIRDYLLGKKPQDIDFLIDPFNIDFIDNLSKILKGR------LVILDEERKYFRI 77 Query: 64 ERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQNRLLR 122 K+ L ++ RRD TIN++ + N EI DP GL DL+ +L+ Sbjct: 78 VVKNKENTFVLDFTPIYQQNLLLEIVRRDFTINSIVLNLRNFEIYDPLKGLKDLERNVLK 137 Query: 123 HVS-PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWKET 181 S + EDPLR+LRV RF A GF+I +R+ ++ L + PER+ +E Sbjct: 138 LSSPDSLKEDPLRILRVFRFGAS----GFKIDKSVFESIRK--NSQRLSKIKPERIHEEL 191 Query: 182 ESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAM 241 L ++ + + LR +FPE+ + +P H + H++ TL + Sbjct: 192 YKILKNPFTSYIWKEMEEYNVLREIFPELSEMKNIPWSEPHHE--NPLEHSITTLYVLEE 249 Query: 242 L---------------------------SPQVDVRFATLCHDLGKGLT---PPELWPRHH 271 L + + ++ A+L HD+GK T ++ Sbjct: 250 LFYNIDKIFPSIKKELEKYFSEKLFSEFTKKETLKLASLLHDIGKSKTYSIDENNLVHYY 309 Query: 272 GHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTF-PMLNPKTIVKLFDSIDAWR 330 GH G +++E++ +RL++ N+ + + H + F I KL ++ Sbjct: 310 GHSKVGSEMLEEIAERLKLSNKELSFIQKIIRNHMYLIDFIKNQEINPIHKLISRVN--- 366 Query: 331 KPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIRE 390 + V L +D + + + + + K++ + G EI + Sbjct: 367 --EDVPSLIFLFISDQIA----IKRTFENKEYFEKLLQDFFKL--KSIPKPLLSGHEIMQ 418 Query: 391 ELTRRRIAAVASWKEQRC 408 + V KE+ Sbjct: 419 LFNLQPSPLVGILKEKLI 436 >UniRef50_A7RRV1 Predicted protein n=2 Tax=Metazoa RepID=A7RRV1_NEMVE Length = 414 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 83/413 (20%), Positives = 137/413 (33%), Gaps = 61/413 (14%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG------YQQVGRDFPVFLHPQTH 55 ++ +VGGAVRD L+G KD D +TP++M+ + G Sbjct: 34 ELRIVGGAVRDLLMGKLPKDIDLC-TNATPEQMIKMFKDEEIRCIETGLQHGTLTAHINK 92 Query: 56 EEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGD 115 ++ + T + G + D +RRDLT NA++ D G + D +NG D Sbjct: 93 TDFEV--TTLRIDVETDGRHAKVKFTNDWQLDAERRDLTFNAMSVDLTGNLYDYFNGEID 150 Query: 116 LQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 L+ +R V ED LR+LR RF + A +TLA+++E+ A L + Sbjct: 151 LRKGHVRFVGDARLRIKEDYLRILRYFRFYGKIATEPDNHDPDTLAVIKEL--AEGLRII 208 Query: 173 TPERVWKETESALTTRNPQVFFQVLRDCGALRVL-FPEIDALFGVPAPAKWHPEIDTGIH 231 + ER+W E L + Q Q+L D G + P DA H Sbjct: 209 SVERIWLEVSKILIGNHAQHLLQMLYDLGIASNIGLPTYDASCMTEF------------H 256 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 S L P + E L + ++ Sbjct: 257 RAWKESQIFSLQPVTLLCCLVNT-----------------------ACEAEILARHWKLS 293 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 N R+L + + E L P + + + + + Sbjct: 294 NAERNLGKFITEHRLPKEHETPLKPYQ--DMLVVSPSAQSKETLRG--------HITELL 343 Query: 352 FESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVASW 403 + G + + V + G K G E L++ + S+ Sbjct: 344 HYQGRHELGEAIACWIIPSFPVTGDHLKSIGLKPGPEFGRTLSQLKQMWRESY 396 >UniRef50_Q2RXH4 Polynucleotide adenylyltransferase region n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RXH4_RHORT Length = 525 Score = 240 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 87/442 (19%), Positives = 133/442 (30%), Gaps = 53/442 (11%) Query: 2 KIYLVGGAVRDALLGLPVK---DRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEY 58 + VGG VRD+LL D D P+ ++ + P L T Sbjct: 95 EARFVGGCVRDSLLRRDPLRPMDIDIATTE-RPERVIALIEAAGLKAVPTGLAHGTLTVV 153 Query: 59 A----LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 A T + + G A + +D RRD TINAL+ D G + D ++G+ Sbjct: 154 AGGKPFEVTTLRRDTACDGRHAEVAFTTSFREDAGRRDFTINALSADREGRVFDYFDGIS 213 Query: 115 DLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL +R + ED LR+LR RF AR+ AL A L+ Sbjct: 214 DLHAGWVRFIGRPMDRIAEDYLRILRFFRFHARFGRPPADPD----ALSACAAQAAGLDR 269 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 L+ ERV E L T +P +R L + PE + + Sbjct: 270 LSAERVRSELLKILDTADPAGVLMAMRGVHVLERVLPEAGDVTNLRMLTLLETRG----- 324 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 M L R A + L RLR+ Sbjct: 325 -----LMLPGLGADPLRRLACVVGPPALSAGSGPPALSAVAGSDPSRDSGAALGARLRLS 379 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNP--KTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 + + +P + + +L D V AL A RG+ Sbjct: 380 RAETARLTGMLDA--PAGRWPDPDAGEGALRRLLDGEG----KDLVIDRALLRWAAERGK 433 Query: 350 TGFES-----ADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRR-------- 396 + + + + G KG + E L R Sbjct: 434 GPYPRAERTARWRALIETALGWTAPTFPLGGRDALACGLKGPAVGEALAALRGRWLEGGC 493 Query: 397 -------IAAVASWKEQRCPKP 411 +A +A+W++ +P Sbjct: 494 QAGRDEMLAWLATWRDGAADEP 515 >UniRef50_Q76YD7 Putative uncharacterized protein n=1 Tax=Aeromonas phage Aeh1 RepID=Q76YD7_9CAUD Length = 347 Score = 240 bits (612), Expect = 9e-62, Method: Composition-based stats. Identities = 130/404 (32%), Positives = 187/404 (46%), Gaps = 61/404 (15%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 M IYLVGGAVRD ++ KDRD+VVVGST EM+ GY+QVG DFPV+L +EYAL Sbjct: 1 MNIYLVGGAVRDMVMNREPKDRDYVVVGSTHDEMIAKGYKQVGADFPVYLDH-LGQEYAL 59 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNRL 120 ARTER +G GY F P+VTLE DLKRRD T+NA+A NG +IDPYNG D++ R+ Sbjct: 60 ARTERSTGKGYNDFVTDFNPNVTLEQDLKRRDFTMNAMALGMNGVVIDPYNGQQDIKERV 119 Query: 121 LRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPERVWK 179 + V+P AF EDP+RVLR RFAARY FR++ T+ + G ++HLT ER+W Sbjct: 120 VNVVNPQAFHEDPVRVLRACRFAARY---DFRLSTLTMECILRCIKDGRMDHLTSERIWL 176 Query: 180 ETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMA 239 E E + F L GA++ L ++ D I+TL Sbjct: 177 EFEKSF-GTKFDDFLAHLTLSGAVKAL----------DIGGRFVN--DVKINTLWMDH-- 221 Query: 240 AMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLAR 299 + +FA + + + + + ++VP E + A Sbjct: 222 GHKNSSPVEQFAAMINHM-----DTKARDHFYSI--------------VKVPCEFKKFAD 262 Query: 300 LVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQ 359 +V + + V+L+ ++++ R R + F + Sbjct: 263 IV--------RNSLQDSALNVRLYTALNSTRNKFR-----------EEIKNYFVDENEVS 303 Query: 360 GRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVASW 403 A + SV + KG E+ + RI +A Sbjct: 304 KEKFEAAEKAFDSVSA---MNYYLKGKELGHAMMCDRINKIADV 344 >UniRef50_Q96Q11 tRNA-nucleotidyltransferase 1, mitochondrial n=39 Tax=Deuterostomia RepID=TRNT1_HUMAN Length = 434 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 78/411 (18%), Positives = 135/411 (32%), Gaps = 66/411 (16%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV-------GRDFPVFLHPQT 54 ++ + GGAVRD L G+ +D D+ +TP +M + G Sbjct: 58 ELRIAGGAVRDLLNGVKPQDIDFATT-ATPTQMKEMFQSAGIRMINNRGEKHGTITARLH 116 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 E + + T + G + D +RRDLTIN++ +G + D +NG Sbjct: 117 EENFEI--TTLRIDVTTDGRHAEVEFTTDWQKDAERRDLTINSMFLGFDGTLFDYFNGYE 174 Query: 115 DLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL+N+ +R V ED LR+LR RF R ETL + E +A L Sbjct: 175 DLKNKKVRFVGHAKQRIQEDYLRILRYFRFYGRIVDKPGDHDPETLEAIAE--NAKGLAG 232 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++ ER+W E + L + ++ D + G+PA A + Sbjct: 233 ISGERIWVELKKILVGNHVNHLIHLIYDLDVAPYI--------GLPANA-------SLEE 277 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 SP+ + +T +L RL++ Sbjct: 278 FDKVSKNVDGFSPKPVT-LLASLFKVQDDVTKLDL--------------------RLKIA 316 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNP--KTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 E ++L + + + + K RV +L Sbjct: 317 KEEKNLGLFIVKNRKDLIKATDSSDPLKPYQDFIIDSREPDATTRVCELL---------- 366 Query: 350 TGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAA 399 ++ + +++ V + + G G EI L + R Sbjct: 367 --KYQGEHCLLKEMQQWSIPPFPVSGHDIRKVGISSGKEIGALLQQLREQW 415 >UniRef50_Q6MM27 Poly A polymerase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MM27_BDEBA Length = 397 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 89/413 (21%), Positives = 151/413 (36%), Gaps = 67/413 (16%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYAL 60 +L GG VRDALLG+ D D +TP+++ + V G+ F V + + Sbjct: 28 AFLAGGCVRDALLGVQAHDLDL-ATNATPEKVESLFSKTVNVGKSFGVMRVLVEGADIEV 86 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQNR 119 A T R G+ G + ++D +RRD T+NAL D +++D G DL+ R Sbjct: 87 A-TFRNDGTYSDGRRPENVVFSSPQEDAQRRDFTVNALFYDLATAQVLDYVEGQKDLKAR 145 Query: 120 LLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 +LR V F ED LR+LR ARF+A+ L F + + A +++M ++ ++ ER Sbjct: 146 VLRTVGDAERRFEEDHLRLLRAARFSAQ---LNFELEPVSFAAVKKMAEK--VKSVSGER 200 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + +E L T + QV++D G ++VLFP + + + Sbjct: 201 IREEMTKLLKTEHADHGLQVMKDSGLMKVLFP-------------FRLRKNDWVK----- 242 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 L+ + R A G +LV + L++ R Sbjct: 243 ---NSLATEAWQRLAMFVR------------------SAQGTELV-VVLDMLKLSTRDRR 280 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 + T + +++ L SEA ++A Sbjct: 281 AIEDAWKVWQDPQTVLKNSLGKQLQMLAKEGVV-----FALRILLSEA------VEKTAI 329 Query: 357 YPQGRWLREAWEVAQS--VPTKAVVEAGFKGVEIREELTRRRIAAVASWKEQR 407 + EV + + V G I L + + + R Sbjct: 330 EFLLAEWKSWQEVLPRPFLNGEDVKGR-LTGPAIGVCLDKAFEQQLERQLQSR 381 >UniRef50_A4W0U8 CCA-adding enzyme n=68 Tax=Streptococcaceae RepID=CCA_STRS2 Length = 403 Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats. Identities = 94/410 (22%), Positives = 153/410 (37%), Gaps = 61/410 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTH--E 56 + Y VGG+VRDA+LG P+ D D + S PQE + + G + L + Sbjct: 25 FEAYFVGGSVRDAILGRPIHDVD-IATSSYPQETKQIFSRTIDVGIEHGTVLVLEGKKEY 83 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE + +LE+DLKRRD T+NA A D+ +I+D ++G+ DL Sbjct: 84 EITTFRTEEEYVDFRRPSQVSFVR--SLEEDLKRRDFTVNAFALDEEAQIVDLFDGMTDL 141 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +NR LR V F ED LR++R RFAA L F I T M + A LE ++ Sbjct: 142 ENRTLRAVGIPAERFNEDALRIMRGFRFAA---TLDFEIEPTTFEAMVQT--APLLEKIS 196 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER + E + L + + + D A P++ + D L Sbjct: 197 VERSFIEFDKLLMADFWRKGLRAMIDSKAYN-FLPDLAG------------KSDELEAML 243 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 +L+ S + +A L L G+ ++ ++ + N+ Sbjct: 244 TSLTEEFRFSTS-EQAWALLFVCL-------------------GIDNIKSFLKKWKTSND 283 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 + + E + L P+ I + + + +A Sbjct: 284 FQRSVVKLVEIYQLRQAGPVTK---------QICFKYGKEFLYLVEELHQAQGFVTDFAA 334 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVVEA-GFK-GVEIREELTRRRIAAVA 401 Q + + E+ V +++A K G + E L V Sbjct: 335 IDKIDQALTIHDKHEIV--VNGGHLMKAFDLKPGPVLGELLKEVEFQIVE 382 >UniRef50_A6CRX0 tRNA nucleotidyltransferase n=1 Tax=Bacillus sp. SG-1 RepID=A6CRX0_9BACI Length = 395 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 79/411 (19%), Positives = 146/411 (35%), Gaps = 70/411 (17%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLH--PQTHEE 57 + Y VGGAVRD LL P D D + + PQE+ + + G + + +T E Sbjct: 24 QAYFVGGAVRDLLLNRPTNDID-IATSALPQEVKGVFPKTIDVGIEHGTVVVIYNETPYE 82 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 R+E + +L++DL+RRD TINA+A D +G I DP+ G D++ Sbjct: 83 ITTFRSEEEYKDHRRPE--SVTFIKSLKEDLQRRDFTINAIAMDRSGTIHDPFGGEVDIK 140 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 + +R V F ED LR++R RF A+ LGF++ ++T ++ + L+++ Sbjct: 141 AKTIRTVGSADERFKEDALRMMRAVRFMAQ---LGFKMENDTFESIK--RNGNTLKYIAV 195 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E E L R + F+ L + G + P + A A + T +M Sbjct: 196 ERLSAEFEKLLGGRFKKASFESLSETGLYQ-FLPGLKANVVTSAAGMPINHLSTEQMWIM 254 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + ++ + + + R+P++ Sbjct: 255 LVHLSKGD---------------------------------------KSILEHWRLPSKK 275 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 F L+ + + + + Sbjct: 276 IKYISKGVSF---------LSDRMKIPWDQYSLYLAGISIALDVQEVYHVVDPHESTDLQ 326 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVV----EAGFKGVEIREELTRRRIAAVA 401 L ++ ++ ++G G IR+ + + A + Sbjct: 327 DLKKMYEKLPIKDRGELALTGNDLMGWTGKSG--GPWIRDIIEKTEKAVIQ 375 >UniRef50_D2R1L2 tRNA adenylyltransferase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1L2_9PLAN Length = 419 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 96/415 (23%), Positives = 143/415 (34%), Gaps = 58/415 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ----VGRDFPVFLHPQTHE- 56 + GG VRD LLG KD D V + P E+ + +G F V E Sbjct: 26 QALWAGGCVRDQLLGQRPKDYD-VATSALPDEVRKLFGHKRTLAIGAAFGVITVLGPREA 84 Query: 57 ---EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNG 112 + A RT + G A T E D +RRD TIN L D +ID G Sbjct: 85 GQLDVATFRT---DATYSDGRHPDAITFSTPEHDAQRRDFTINGLFFDPIEERVIDYVGG 141 Query: 113 LGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGEL 169 DL R++R + ED LR+LR RFAAR LGF I +TLA + + A +L Sbjct: 142 EADLAARVVRAIRDPAERIEEDKLRMLRAVRFAAR---LGFSIEAQTLAAIEQ--RADQL 196 Query: 170 EHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTG 229 + ++ ER+ E E L + +LR L + PE+ + Sbjct: 197 QVVSAERIAAEMEKILVHNSRAQGLALLRQARLLPEVLPELAEVTDF------------- 243 Query: 230 IHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLR 289 TL+ ++ + P + A L +P R R Sbjct: 244 --TLLARELSLLEQPSFAMAIAALLRHTAAARSPLTAAALADQIAA-----------RWR 290 Query: 290 VPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG- 348 + N + + L + L + ++ R+ +L A RG Sbjct: 291 LSNHVAEGISLALRQLPQLQIATELPWPQLQRML-------VQPRIGELLGLLAAVERGA 343 Query: 349 --RTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAV 400 R+ + E + + AG G RE L + R + Sbjct: 344 GERSPQTDYCRAKLALPAEQLNPPPLLTGSDLKRAGLSPGPMFREILEQVRDQQL 398 >UniRef50_B0T8C7 Polynucleotide adenylyltransferase region n=6 Tax=Alphaproteobacteria RepID=B0T8C7_CAUSK Length = 417 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 83/409 (20%), Positives = 139/409 (33%), Gaps = 55/409 (13%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHE----EY 58 VGG VR+ L+G P+ D D TP ++++A + R P + T Sbjct: 33 ARFVGGCVRNTLMGKPIDDIDIATT-LTPDQVIEALGEAGLRAIPTGVDHGTVTALSGGR 91 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYN-GLGDLQ 117 T + G + + D +RRD NAL D G + DP G+ D + Sbjct: 92 PYEITTLRRDVETDGRRAVVSFTQDWDQDAERRDFRFNALYVDLQGRLYDPTGEGVNDAR 151 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 + V ED LR+LR RF A Y + AL G +E Sbjct: 152 EGRVVFVGDPMTRIREDYLRILRFFRFHAWYGKG----EADQKALAACKALKGMVEGRAA 207 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER KE L +P+ +++ L + P + +L LM Sbjct: 208 ERTQKELLKLLAAEDPRPSLRLMAATSVLSSILPFVKSLARFEG--------------LM 253 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + + ++R A L D K+ EQ+ +RLR+ N + Sbjct: 254 AIETEQLFENDPELRLAALIPD--------------------DPKIAEQMAERLRLSNAL 293 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 ++ I ++ ++P+ + ++ RV + A GRT Sbjct: 294 KERLVEAVGKSPRIVSW--MSPRECRRAVYALGLKTFSDRV----KLAWA-GAGRTATTP 346 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEAGF-KGVEIREELTRRRIAAVAS 402 A + + +++AG KG + E + I + Sbjct: 347 QWRGLLALGESWSPPAFPLTGEDILKAGVPKGPMVGEVMREVEIWWIDQ 395 >UniRef50_Q7UWK0 Poly A polymerase n=1 Tax=Rhodopirellula baltica RepID=Q7UWK0_RHOBA Length = 427 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 90/422 (21%), Positives = 140/422 (33%), Gaps = 71/422 (16%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV----GRDFPVFLHPQTHE 56 L GG VRDALLG KD D V +TP+ + + ++ G F V Sbjct: 36 FVAVLAGGCVRDALLGRKPKDFD-VATDATPESVREVFGKRNTLAFGESFGVIGVLPPRS 94 Query: 57 EYALA----------RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGE 105 T R G+ G + E D RRD TIN + D + Sbjct: 95 AVTEEPSAKLMPTEVATFRADGNYSDGRRPDSVTYGDAEADAMRRDFTINGMFYDLFESK 154 Query: 106 IIDPYNGLGDLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMRE 162 +ID G+ DL+ LR + F ED LR+LR RFA LGF I +T A ++ Sbjct: 155 VIDYVGGIQDLEKGHLRTIGKAVQRFEEDKLRMLRAVRFA---TTLGFSIEYKTFAAIQN 211 Query: 163 MTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKW 222 HA ++ ++ ER+ E +T+ + L D G ++P++ ++ + Sbjct: 212 --HASDISVVSGERIGAEMRRVMTSSASDFGLETLVDTGLALHVWPQLRSMNWTE----Y 265 Query: 223 HPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVE 282 I T H ++MA L H G ++ + Sbjct: 266 SRAIQTTKHRSFEVAMA-----------LALFHLPGD-----------------SIQCLR 297 Query: 283 QLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTS 342 L ++ R I L + +P +++ A T Sbjct: 298 LLFNDWKLSVAERRAIEAALTHAQTITQCDGLPWSRL-----------QPILIDEDAETI 346 Query: 343 EADVRGRTGFESADYPQGRWL---REAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIA 398 A R R L V ++ G + G E + L R Sbjct: 347 VATARALAPKSRGVARAARSLFGDPNKLNPPPLVTGADLIANGMRPGPEFKSILQSIRDD 406 Query: 399 AV 400 + Sbjct: 407 QL 408 >UniRef50_C8NF31 Poly A polymerase n=2 Tax=Granulicatella RepID=C8NF31_9LACT Length = 409 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 87/416 (20%), Positives = 144/416 (34%), Gaps = 64/416 (15%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLH--PQTHEE 57 + VGG+VRD +LG + D D + +TP+E+ V G + L Q E Sbjct: 32 EAVFVGGSVRDLVLGKEISDVD-IATSATPEEVKSLFSHTVDVGIEHGTVLVIYHQDSYE 90 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RTE + +LE+DL RRD TINALA +D EI+D ++GL DL+ Sbjct: 91 VTTFRTEGTYQDFRHPDSVTFVR--SLEEDLMRRDFTINALAINDQEEIVDYFDGLKDLE 148 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 N ++R V F ED LR++R RFA + LGF I +T +R LE + Sbjct: 149 NSIIRCVGNPMERFNEDALRMMRAIRFAGQ---LGFTIESKTFNAIR--VLKSNLERVAV 203 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E E + + + F + + P+ TL Sbjct: 204 ERMKVEFEKMIVSLHRSNAFLAFIESDLYQSC-PDFTNSRE----------------TLK 246 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + + S + + + V ++++ + + NE Sbjct: 247 KIGEFPVSSMSILQAW-----------------VLFAYYNQLSVSELKKVLKNWKSSNEQ 289 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + + + R +E L GRT + Sbjct: 290 IS--ETLIGYQTFLKRLDKEWDS----FMAYECTERIAIEIEGLL-----PGLGRTENHN 338 Query: 355 ADYPQGRWLREAWEVAQSVPT---KAVVEAGFKGVEIREELTRRRIAAVA-SWKEQ 406 + L + K ++ G +I + L A ++ K + Sbjct: 339 ILTQVYKTLPIHSMQDIQIDGFGVKEALKLEKMGPKIGKVLQAVEKAILSNKLKNE 394 >UniRef50_Q2B3W5 TRNA nucleotidyltransferase n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B3W5_9BACI Length = 400 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 88/411 (21%), Positives = 153/411 (37%), Gaps = 65/411 (15%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLH--PQTHEE 57 + Y VGG+VRD LLG + D D + +TP E+ + VG + + E Sbjct: 25 EAYFVGGSVRDYLLGKDISDVD-IATSATPMEIKGIFPRTADVGIEHGTVIVLYDGDSYE 83 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 R+E +L++DLKRRD +N++A +G IIDP+ G D++ Sbjct: 84 VTTFRSESDYEDFRRP--SKVDFIRSLDEDLKRRDFRMNSMAMSKDGRIIDPFGGQEDIR 141 Query: 118 NRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 ++ + V F ED LR++R RFA++ L F+I ET + ++ A LE + Sbjct: 142 SKRIATVGNPLERFYEDALRMMRAVRFASQ---LSFQIDGETYEAL--VSEAYLLEKIAV 196 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER E E L N + +++ D G + L P A E+ + L Sbjct: 197 ERKLAEFEKLLAGENSFMALKIMADTGLSQHL----------PGLAGKKQELISFAGRLD 246 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + ++ R+A L LG K E + ++P + Sbjct: 247 SGLLSEE-------RWALLSAGLGHDF-----------------KTAESFLRSWKMPVKK 282 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + + + +++ K +A R +RV A + E Sbjct: 283 IRQIGKIL-YWLQYRSVQNWTLESVYK--AGAEAARNAERV-------LAATGDDSADEE 332 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVV----EAGFKGVEIREELTRRRIAAVA 401 L V ++ + G G ++E L + + ++ Sbjct: 333 VPVRLYASLPIRSTKELDVTGNDLIQWFNKPG--GPWVKELLGQVENSIIS 381 >UniRef50_B9R2T5 tRNA nucleotidyltransferase/poly(A) polymerase family protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R2T5_9RHOB Length = 415 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 77/402 (19%), Positives = 135/402 (33%), Gaps = 51/402 (12%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTH----EEY 58 +VGGA+R+ LLG PV D D +TPQ+++ + + T + + Sbjct: 34 ARVVGGAIRNTLLGHPVPDIDIATT-ATPQDVMQRAADAGLKPIGTGIDHGTITVISDGF 92 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQN 118 T + G + D RRD T+NAL D G++ DP GL D Sbjct: 93 PYEVTTLREDVETYGRQAKVVFGRDWKKDALRRDFTMNALYVDSLGKLYDPLGGLEDCLA 152 Query: 119 RLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 R +R + ED LR+LR R A Y + L + L HL+ E Sbjct: 153 RRVRFIGDPDMRLREDYLRILRFFRIYAAYGDGDM----DAEGLGACLRQRDGLRHLSAE 208 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E ++ V +++ DCG + + + L Sbjct: 209 RIGHEMRRLVSAPKAAVAVRMMYDCGLWEIATGGLAKIEDFE--------------CLRH 254 Query: 236 LSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 L A + +V L + + V+++ RLR+ N R Sbjct: 255 LDALAPETQDPEVGLTVLSGFVR--------------------EDVDRVADRLRLSNAER 294 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 ++ E + + + L + R+ LA + + + R G + Sbjct: 295 KRMQICWEAYKTFRQSDQMPD--LKTLLYTHG--RQGAIDGLLAYWAAFEAQKRLGDQPD 350 Query: 356 DYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRR 396 L+ + ++ G + G ++ + L Sbjct: 351 FEDAVLKLKSVEVPVFPLKGADMIALGHRPGPQVGKVLKTLE 392 >UniRef50_Q9VNH2 CG2100 n=12 Tax=Diptera RepID=Q9VNH2_DROME Length = 477 Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats. Identities = 82/410 (20%), Positives = 136/410 (33%), Gaps = 67/410 (16%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ-------VGRDFPVFLHPQT 54 ++ + GGAVRD L+G+P KD D +TP +M ++ G Sbjct: 89 ELRIAGGAVRDILMGIPPKDIDLATT-ATPDQMKQMFEKEEVRMINANGEKHGTITPRIN 147 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 +E T + G + D RRDLTIN++ +G + D + G Sbjct: 148 DKE-NFEVTTLRIDIRTDGRHAEVMYTTDWQLDANRRDLTINSMFLGFDGTVYDYFYGYD 206 Query: 115 DLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DLQ R + V ED LR+LR RF R A TLA ++E +A L Sbjct: 207 DLQERRVVFVGEADIRIKEDFLRILRYFRFYGRIASEENNHDKATLAAIKE--NAKGLAR 264 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVL-FPEIDALFGVPAPAKWHPEIDTGI 230 ++ ER+W E + + F + C + P + E D Sbjct: 265 ISGERIWSELQKIVPGNFGAALFLEMHRCNLFEYIGLP----------KEPYLDEFDRLC 314 Query: 231 HTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRV 290 L Q + A + H V+ ++ +RL++ Sbjct: 315 KALDQFE----KPHQPILYLAGMLH---------------------SVEDAMEMHKRLKL 349 Query: 291 PNEIRDLARLVAEFHDLIH-TFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGR 349 RDLAR + + + + + L KL R D + Sbjct: 350 SAYERDLARFITQEREKVGSQYTTLRDYQ--KLCLQKYIQR--------------DFVEQ 393 Query: 350 TGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAA 399 S L+ + + A+ + G G+ + + ++ Sbjct: 394 LLKYSGKLELYNQLKSWVKPDFPIRGNALAQRGLNGMRLGLVMDELKLLW 443 >UniRef50_A0AK10 CCA-adding enzyme n=4 Tax=Listeria RepID=CCA_LISW6 Length = 393 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 75/416 (18%), Positives = 141/416 (33%), Gaps = 74/416 (17%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHE-- 56 + Y VGG+VRD LL + D D + + P+E+ + G + E Sbjct: 20 FEAYFVGGSVRDYLLCRTISDVD-IATSAFPEEVKEIFPSTYDTGIAHGTVTVRENKECY 78 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE +L++DL+RRD T+NA+A D++ E+ DP+ G + Sbjct: 79 EVTTFRTEGTYEDFRRP--SEVTFIRSLKEDLQRRDFTMNAIAMDEHFELHDPFFGQLAI 136 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 QN+ ++ V F ED LR++R RF ++ L F + ET +++ + L+H + Sbjct: 137 QNKEIKAVGKASERFQEDALRMMRAVRFLSQ---LDFHLDKETENALQK--NIALLQHTS 191 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E + + VL + P + Sbjct: 192 VERITVEWVKLMKGPAVKRAINVLLKVE-METYLPGLKG--------------------- 229 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 + FA+ D T + + + ++PN+ Sbjct: 230 ---------EKSALIPFASWEWD---KRTTENVIWLGLAVAVKKANVT-SFLKAWKLPNK 276 Query: 294 IRDLARLVAEFHDLIHTFPMLN-----PKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 L ++ + K + L + I+ R + Sbjct: 277 TIQLVNQAYQYALNGKEYWQKEELYYAGKEVFSLVNEINVIRGQEN-------------- 322 Query: 349 RTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK--GVEIREELTRRRIAAVAS 402 ++ L + ++ ++E K G I++ L + A ++ Sbjct: 323 ---KQNELDQLYETLPIHSKKDLAITGGDLLEWADKSAGPWIKDTLDKVESAVLSQ 375 >UniRef50_Q6AJ41 Related to poly(A) polymerase n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ41_DESPS Length = 501 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 99/454 (21%), Positives = 175/454 (38%), Gaps = 73/454 (16%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 ++++ GG VRD LG KD D V G+ + +Q+G V L E Sbjct: 46 EVWVAGGPVRDYFLGRSAKDLDL-VTGAGAIDFCRRLLRQLGEGSLVPLSEGDEEAC--- 101 Query: 62 RTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNG------EIIDPYNGLGD 115 R + + + A +LE+DL RD T+NA+A + ++IDP++G D Sbjct: 102 RIVYRHEIV--DISSFRASASSLEEDLALRDFTLNAMALPLSTLRGEKVDLIDPFSGRDD 159 Query: 116 LQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPE 175 L +++LR + AFG DPLR+LR RF + ++ + + H L + E Sbjct: 160 LADKILRPLPEAFGRDPLRILRAFRFQSLFS---LSFDPAIAPAI--IAHRHLLSGVAAE 214 Query: 176 RVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMT 235 R+ E ++ L + + D G L +L PE+ + PA H +D H+L Sbjct: 215 RISAELDATLMGTSALEALAGMEDLGILELLLPELSDGRDILQPAAHH--LDVYGHSLAC 272 Query: 236 LSMAAMLSP---------------------QVDVRFATLCHDLGKGLTPP----ELWPRH 270 L ++ + +A L HD+GK + + Sbjct: 273 FEKMHWLLAGGVMSFVSREELDLATLAKKTRLCLCWAALLHDVGKPGSRDIRATDGRITF 332 Query: 271 HGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLI------HTFPMLNPKTIVKLFD 324 + H G ++V ++ RLR NE++D + H ++P+ +++L+ Sbjct: 333 YNHDERGARIVAKIGTRLRWSNEVKDAVARLVAMHMHPFHLCAVQQSGEVSPRAVLRLYR 392 Query: 325 SIDAWRKPQRVEQLALTSEADVRGRTG-------FESADYPQGRWLREAWEVAQSV---- 373 R + ++ L L + AD G + R + +E + V Sbjct: 393 -----RAQELLQPLFLLAFADSLASQGEGRPAEMEQDIALLYRRTMSVYYEKIRPVLLGE 447 Query: 374 ---PTKAVVEAGFK---GVEIREELTRRRIAAVA 401 + ++ F G + LT+ V Sbjct: 448 KILTGRDILRE-FSLDPGPLYGDILTKVEELRVE 480 >UniRef50_Q0AX27 PolyA polymerase family protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AX27_SYNWW Length = 880 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 99/424 (23%), Positives = 155/424 (36%), Gaps = 56/424 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR-----DFPVF---LHPQ 53 + Y VGG VRD L +P D D VV G + G+ F L Sbjct: 477 RAYCVGGFVRDFFLRVPNFDVDLVVEGDGEELARKMAQHLGGKARIHQRFRTAALMLPDG 536 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTIN--ALAQDDN--GEIIDP 109 T + A ARTE ++ +D+ RRD TIN A+A + + G++ID Sbjct: 537 TKIDIATARTEYYE----FPAALPKVEKASIREDMYRRDFTINTLAIALNPDSFGDLIDY 592 Query: 110 YNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGE 168 + G DL+ L+R + +F EDP R++R RF RY F I D+TL ++ Sbjct: 593 FGGRKDLEKGLIRILYNLSFVEDPTRIIRAIRFEQRYK---FTIEDDTLRFAKDAIERRL 649 Query: 169 LEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDT 228 L L+ +R+ +E L+ +P + + G + PEID K P I T Sbjct: 650 LGKLSYKRIIQELMLLLSEIDPLPALDRIMEIGVWEYMIPEIDLNKVSRTMIKRTPIIIT 709 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRL 288 + L GL +LV Q+ +R Sbjct: 710 WWEERYYGKNIKG--------WLVYFMLLLAGL---------------DEELVIQIIKRY 746 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 + N R + + ++ ++ +D W V L L S D Sbjct: 747 HLDNYARKAIQESRQVPQIVEYLWESREILPGEMDQRLDGWSNESMV--LLLLSIKD--- 801 Query: 349 RTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIR---EELTRRRIAAVASWK 404 E +L +V + + E G K G E R +EL R+++ + + Sbjct: 802 ----ELLWEKLVNYLDLKEQVKVEINGFDLKEMGLKQGPEFRFIFDELYRQKLNGIIKNR 857 Query: 405 EQRC 408 E+ Sbjct: 858 EEEL 861 >UniRef50_UPI00019275C7 PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI00019275C7 Length = 436 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 82/416 (19%), Positives = 142/416 (34%), Gaps = 64/416 (15%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQ------QVGRDFPVFLHPQT 54 +I +VGGAVRD LLG P KD D +TPQ+M++ + + G Sbjct: 53 FEIRIVGGAVRDVLLGNPAKDIDLSTT-ATPQQMVEVFSENKIRFIETGLAHGTLTAHYN 111 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 ++ + T + G + D +RRDLT N+++ D N + D +NG Sbjct: 112 GRDFQV--TTLRYDIETDGRHAKVEFTNDWKLDAERRDLTFNSMSMDVNAVLYDYFNGEN 169 Query: 115 DLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL+ ++R V ED LR+LR RF R A ++TL ++ + + L++ Sbjct: 170 DLKQGVVRFVGNVENRIREDYLRILRYFRFYGRIAPNIHSHDEKTLNTIKTL--SEGLKN 227 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVL-FPEI--DALFGVPAPAKWHPEIDT 228 L ER+W E LT +++ + FP + D L +D Sbjct: 228 LAVERIWLEVSKILTGPLAPHLLLLMQQLNVTESIGFPIVLEDNLKLFETVWTQTRNVDV 287 Query: 229 GIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRL 288 TL+ + K++E + Sbjct: 288 SPVTLLVTLL-------------------------------------ENEKIMEDFGSKW 310 Query: 289 RVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRG 348 ++ N+ R + + L + K L E++ + Sbjct: 311 KLSNKERIMGLFIISHRSLRNYSEKCPLKPYQDLIVLNSNKGDASVRERVRQLMFYHGKI 370 Query: 349 RTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVASW 403 FE L + + + G K G E + L + + + S+ Sbjct: 371 TESFE---------LDKWDIPIFPITGLDLKNCGIKQGPEFGKILIKLKKIWMNSY 417 >UniRef50_A1HMM1 Polynucleotide adenylyltransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMM1_9FIRM Length = 302 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 83/255 (32%), Positives = 113/255 (44%), Gaps = 34/255 (13%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV-------GRDFPVFLHP--Q 53 Y+ GGAVRD + G PV D D + + P+ + + +Q G ++ V + Sbjct: 23 AYIAGGAVRDLVAGRPVNDYD-IATSARPEAVREIAARQGWQVVDKLGTNYGVVMVVVDG 81 Query: 54 THEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGL 113 T E A R ER + T+ DDL RRD T+NA+A D G IIDP+ G Sbjct: 82 TGVEVATFRGERYGEDSHRP--AEVWYADTITDDLSRRDFTVNAMAMDVAGNIIDPFGGR 139 Query: 114 GDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELE 170 DL RL+R V FGED LR+LR RFAA+ LGF I D TLA + + G + Sbjct: 140 RDLAARLIRTVGDPNRRFGEDALRMLRACRFAAQ---LGFAIDDVTLAAIP--ANLGRMA 194 Query: 171 HLTPERVWKETESALTTRNPQVFFQVLRDCGALR--------------VLFPEIDALFGV 216 L+ ERV E + L P + L G + PE++ L G+ Sbjct: 195 GLSLERVRLELDKLLLGDYPHLGLAALVATGLAGASCRVKEKGEYQAVAILPELNHLVGL 254 Query: 217 PAPAKWHPEIDTGIH 231 P +H H Sbjct: 255 PQNPAYHAWDGWWQH 269 >UniRef50_A5IJ71 CBS domain containing protein n=5 Tax=Thermotogaceae RepID=A5IJ71_THEP1 Length = 863 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 91/409 (22%), Positives = 149/409 (36%), Gaps = 56/409 (13%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPV--------FLHP 52 M +Y+VGG VRD LLG+ D D VV G+ + A G+ FL Sbjct: 470 MPVYVVGGFVRDLLLGIENLDIDIVVEGNALEFAEYAKRFLPGKLVKHDKFMTASLFLKG 529 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIID 108 + A AR E T++ DL RRD TINA+A N G +ID Sbjct: 530 GLRIDIATARLEYYES----PAKLPDVEMSTIKKDLYRRDFTINAMAIKLNSKDFGLLID 585 Query: 109 PYNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 + G DL+ ++R + +F +DP R+LR RF R+ FRI + T L+++ G Sbjct: 586 FFGGYRDLKEGVIRVLHTLSFVDDPTRILRAVRFEQRF---DFRIEETTERLLKQAVEEG 642 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 LE T R+ +E E L +NP + + ++ LFP + P +D Sbjct: 643 YLERTTGPRLRQELEKILEEKNPLKSIRRMAQFDVIKHLFP----------KTYYTPSMD 692 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQR 287 + P V+ F ++ K ++ + Sbjct: 693 ------GKMENLFRNIPWVEENFG----EVDKFYAALHVFLEFYDDESW----------- 731 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 E+RD L + I P + L + + V+ ++ + Sbjct: 732 ----KEVRDRYSLRRNLINEIRHVEKSAPALLEMLSERVPVSFVYPLVKGVSSETICHFL 787 Query: 348 GRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGF-KGVEIREELTRR 395 E + + L+ + + + ++ G G I E L + Sbjct: 788 AYLSGEKEELFKSYLLKIKNTKLEKINGEYLIRKGITSGKIIGEVLEKI 836 >UniRef50_C6NWQ8 Poly(A) polymerase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWQ8_9GAMM Length = 499 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 95/361 (26%), Positives = 144/361 (39%), Gaps = 32/361 (8%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG---YQQVGRDF--PVFLHPQTHE 56 + YLVGG+VRD LLG KD D V + P+++ + +GR F Sbjct: 69 QAYLVGGSVRDLLLGREPKDYD-VATDARPEQVRKLFRRNARLIGRRFILVHVQFGPEIV 127 Query: 57 EYALAR-----TERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPY 110 E A R E S +G +LE+D RRD T NAL + + I+D Sbjct: 128 EVATFRGQGESAEETSERSASGRILADNVYGSLEEDAGRRDFTANALYYNIADRSILDFA 187 Query: 111 NGLGDLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 +GL DLQ LR + + EDP+R+LR RFAA+ LGF++ A + Sbjct: 188 DGLTDLQAGRLRMIGDPEQRYREDPVRMLRAVRFAAK---LGFQMDAAVEAAIAPC--RD 242 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDA-LFGVPAPAKWHPEI 226 L + R+++ET T + Q F +LR G LFP++D L A + Sbjct: 243 LLLEVPSARLFEETIKLFLTGHAQSSFDLLRRTGLFAALFPQLDRVLDAADAESARELLR 302 Query: 227 DTGIHTLMTLSMAAMLSPQVDVRFATLCHD---LGKGLTPPELWPRHHGHGPAGVKLVEQ 283 T + + ++P FA L + + P + A +L+E+ Sbjct: 303 LALEGTDQRVLLGKSVTP--AFLFAALLWSALQAQRQHLEAQDKPANVALQQAAAELLEE 360 Query: 284 LCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSE 343 R+ +P R A + E DL F + L R + L L + Sbjct: 361 SRGRVAIP---RRFALPMREIWDLQPRFTRRGGRRPYALLAH---PRFRAAFDFLLLRQQ 414 Query: 344 A 344 + Sbjct: 415 S 415 >UniRef50_Q2VZL3 tRNA nucleotidyltransferase/poly(A) polymerase n=3 Tax=Magnetospirillum RepID=Q2VZL3_MAGSA Length = 435 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 93/424 (21%), Positives = 135/424 (31%), Gaps = 58/424 (13%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYA-- 59 ++ VGG VRDALL P+KD D + P+ +L P + T Sbjct: 41 RVRFVGGCVRDALLKRPIKDVD-IATPDPPERVLALLDDAGIHAIPTGIDHGTVTAVIGK 99 Query: 60 --LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 T + G D RRD T+NAL+ D G + DP++G+ D+ Sbjct: 100 AHYEITTLRVDVESFGRHARIEYTDDWRADASRRDFTMNALSADPEGNVYDPFDGIADMA 159 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 +R V ED LR+LR RF A Y IA ET AL A L+ L+ Sbjct: 160 AGRVRFVGEPEKRIEEDALRLLRFFRFHAHYGRG---IAMETRALNACRRMADRLKGLSG 216 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ERV E L +P V+ G L + PE + T Sbjct: 217 ERVAGELVRLLLADDPTPSLLVMHSHGILAHILPEAKE----------FGRLRTLAWLER 266 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + P R A L L +RL++ Sbjct: 267 RGLARPEIRPDSMRRLAALL--------------------ATDRAGALDLGERLKLSGVQ 306 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 +A +H ++ + + L + + A R Sbjct: 307 AKRVAAMAA--PRVHVGFAMDGPATRRALRKVGG----DEFRDLVMVAWAARRSTEARPD 360 Query: 355 A-----DYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVASWKEQRC 408 A R+ V V + ++E G G I L AAV +W E Sbjct: 361 AAESRCWTALLDAARDWQPVELPVKGRDLLELGVPHGPRIGSLL-----AAVEAWWEDLD 415 Query: 409 PKPE 412 +P+ Sbjct: 416 YRPD 419 >UniRef50_C0QG74 tRNA nucleotidyltransferase/poly(A) polymerase n=2 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QG74_DESAH Length = 435 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 91/405 (22%), Positives = 159/405 (39%), Gaps = 43/405 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGY----QQVGRDFPVFLHPQTHEE 57 + ++ GGAVRD + GLP D D +V ++ + + + VG+ F V L E Sbjct: 22 RAFIAGGAVRDMVAGLPPADFD-IVTDASLETIKQTFKNQRVKIVGKSFHVCLVNG--IE 78 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDL 116 A R +R DL++RD TIN++A D +I DP++G DL Sbjct: 79 VASFRGDRTKFPLA---------------DLEQRDFTINSMAWDPVTRQIFDPFSGEQDL 123 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + ++++ EDPLR++R RF ++ G +A ETL ++ ++ Sbjct: 124 KRKIIQFTGNGPLRIREDPLRMVRACRFVSQI---GGTLAPETLGDIKTHGRLVG-ANVA 179 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E A+ P +FF+ L+ G L +FP +D L + +H E H++ Sbjct: 180 KERIRMEILKAMAHDRPSLFFRSLQATGLLIQIFPCLDRLVDLDGG-PFHGET-VFEHSM 237 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLT--PPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 M + + +R A HD GK T E HGH A +E L+ Sbjct: 238 MVGDALS--PKRPLLRLAGFLHDAGKFDTAAIKEGNLTFHGHEKA-RDKIEADLVNLKFS 294 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTG 351 R + + H P+ + ++ +++ ++ AD R Sbjct: 295 TRERRYILSIIDVHMR-PLTEKTTPRAVRRILALLESHGVS--YQEFMRMRIADKRSNLA 351 Query: 352 FESADYPQGRWLREAWEVAQS---VPTKAVVEAGFKGVEIREELT 393 + + R + ++ + + + G I L Sbjct: 352 KQPYTLGEIRNRVQKFKNELAPRGIQAFTPADLAIDGNRIMALLN 396 >UniRef50_A0LF07 Polynucleotide adenylyltransferase region n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LF07_SYNFM Length = 427 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 92/413 (22%), Positives = 142/413 (34%), Gaps = 54/413 (13%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTHEEYAL 60 ++LVGGA+RD LG +D D ++ E++ + + G + + Sbjct: 28 VWLVGGALRDHFLGQAPRDFDL-ATDASADEVVRLFPRVIPIGIRHGTVQVHTRTRDVEV 86 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQD-DNGEIIDPYNGLGDLQNR 119 T GSG G + +DL RRD TINALA G +DP+ G D R Sbjct: 87 TST---PGSGLEG----------ILEDLGRRDFTINALALSYPEGSFLDPHGGCNDADAR 133 Query: 120 LLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 +LR V F EDPLRVLRV RF + LG + T A R + A L + ER Sbjct: 134 ILRAVGDAGRRFREDPLRVLRVFRFVS---ELGLDVEPGTCAAAR--SEANGLAAVAGER 188 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 V +E L+ N +++ + LR + PE+ + Sbjct: 189 VREEVFRILSGGNAVSALRLMEESRVLRTVLPELHESG-----------------CSHAI 231 Query: 237 SMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRD 296 ++ +R A L H L + L + E++ R R+ Sbjct: 232 DTMGRCPNRLRIRMAALLHGLVEEE--ASLGAVSPCGRCVSSRRAEEVMVRWRLSRRQIQ 289 Query: 297 LARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESAD 356 + E L + + +E LA A G E Sbjct: 290 GVLGILEN-PLPGDSANWTDADLRRFIARTGPEFAGDVLE-LARACRAAGGDSAGAEQLS 347 Query: 357 YPQGRWLREAWEVA------QSVPTKAVVEA-GFK-GVEIREELTRRRIAAVA 401 R+ E + + V+ G K G + + L R + + Sbjct: 348 GLYRRYRGEVELRPVPRLRDLPITGEDVMRITGLKPGPRVGKILERAHLEVIE 400 >UniRef50_B8FEB0 Polynucleotide adenylyltransferase region n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FEB0_DESAA Length = 896 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 82/414 (19%), Positives = 140/414 (33%), Gaps = 52/414 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDF--------PVFLHP 52 ++ +LVGG VRD ++ +D D VV G R + + Sbjct: 498 LEAFLVGGFVRDLVMSHKNEDFDVVVEGDGIAFARRFAQVHGYRVHSHSEFGTAVIIMED 557 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIID 108 + A AR E + + +L+ DL RRD T+N +A N G +ID Sbjct: 558 GFKIDVASARFEYYAS----PASLPVVETSSLKMDLYRRDFTVNTMAIQINEKSFGTLID 613 Query: 109 PYNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 + D++ + +R + +F EDP RV R RF RY GF I T L++ Sbjct: 614 YFGAQRDIKAKAIRVLHNLSFVEDPTRVFRAIRFEQRY---GFSIGKLTSNLIKNAVKMD 670 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 HL+ R++ E + L NP + L + P++D FG + + Sbjct: 671 FFRHLSGRRLFSELKLILEDENPIGAVDRMAGYNLLPFIHPDLD--FGPEKQDLFESVKE 728 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQR 287 T L + V+F L H + L +++ + Sbjct: 729 VL--TWHDLQFMDDSYMKWAVQFLALFHGFDQDQVDAALLR---------LEIAPKFHDL 777 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 + + + + + ++ + E L Sbjct: 778 FYEHRQYGR------QCLYRLEREDKMVNSELYRMLTLLP-------TEMLLFL-----L 819 Query: 348 GRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAV 400 R + A R+L E VA + K + + G K G ++ L A + Sbjct: 820 ARAKSKKAKRRLTRFLTELKGVACLLSGKTLKQMGIKPGPIYKKVLDAVLDARL 873 >UniRef50_C6XPE6 Polynucleotide adenylyltransferase region n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XPE6_HIRBI Length = 428 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 89/409 (21%), Positives = 142/409 (34%), Gaps = 55/409 (13%) Query: 3 IYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYA--- 59 VGG VR+ALLG PV D D + P E+ + P + T A Sbjct: 35 ARFVGGCVRNALLGQPVADID-IATKWEPDEVTRRLLKANVAVHPTGIEHGTVTAVANNQ 93 Query: 60 -LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYN-GLGDLQ 117 T + G A +D KRRD +NAL D G++IDP G+ DL+ Sbjct: 94 PYEITTLRRDVSTDGRHATVAFTTDWTEDAKRRDFHVNALYCDLMGDLIDPTGRGISDLR 153 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 + + + ED LR+LR RF A Y + L + H LE ++ Sbjct: 154 EQKIAFIGDADTRLKEDYLRILRFFRFNAWYGSGQLDVE----GLSACLRHRAGLETISV 209 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+W E + L R+P+V + + G L+ + E L A L+ Sbjct: 210 ERIWSELKKILAARDPRVVLEAMSQTGVLQFVLSEAIGLDLFNA--------------LV 255 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 L + L+P +R P + ++ +RL++ N Sbjct: 256 GLELEEHLAPDPYLRLL--------------------SLYPKDIDVISADVKRLKMSNYE 295 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 + RL+A D + K + + A + A VRGR Sbjct: 296 KK--RLLATASDTTDFSKEFSAKAFRRAIYKTG----KDVFKARARLAWA-VRGREANHR 348 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEAGF-KGVEIREELTRRRIAAVAS 402 + + + + ++ G +G + E L R + Sbjct: 349 YWRVLTQSAEKYERPVFPISGEHIIAVGVPEGKPVGEVLQRAEQWWIDE 397 >UniRef50_C6V5C8 Poly A polymerase family protein n=2 Tax=Neorickettsia RepID=C6V5C8_NEORI Length = 392 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 75/408 (18%), Positives = 134/408 (32%), Gaps = 65/408 (15%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHE----E 57 + VGG VRD LLG + D D P++ + A P L T Sbjct: 24 EARFVGGCVRDQLLGRKISDIDLATT-LKPEKAIRALKINGLVTIPTGLKHGTFTVLVNS 82 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 A+ T + G + + + D +RRD T NA+ D G I D ++GL DLQ Sbjct: 83 RAIEITTLRQDLQCDGRHATVSFTDSWKKDAQRRDFTFNAMYMDIEGNIYDYFSGLEDLQ 142 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 NR L+ V ED LR+LR RF A +++E L + + L+ Sbjct: 143 NRRLKFVGEPHQRIEEDYLRILRAFRFQASICKTP--LSEEILHACTKYRKK--ISSLSG 198 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+ E L+ N +++ + + + G+ + H Sbjct: 199 ERIQGEMFKLLSYVNFLSTVFTMQEAKIIDEVLGAKVSFSGLD----YEKSRLIQDHIAA 254 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 + ++++ L R R+ ++ Sbjct: 255 LTLLIRNTESSYNLQW---------------------------------LYSRWRISKKV 281 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFES 354 ++ E ++ KT+ KL + + +L A+ + Sbjct: 282 HQAISILLEEKEM-----HCPKKTLAKLGN--------ELTRKLIKILYAENKLTNTQHK 328 Query: 355 ADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAVAS 402 + + V + ++ G+ G EI ++L + S Sbjct: 329 NFMLV---INNSERPIFPVMGRDLIPLGYTGPEIGKKLKQLEYLWRES 373 >UniRef50_C9M6L8 PolyA polymerase family protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6L8_9BACT Length = 435 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 81/407 (19%), Positives = 137/407 (33%), Gaps = 50/407 (12%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ------VGRDFPVFLHPQT 54 ++LVGG +RD L+G D D + P+++ + V + Sbjct: 20 FSVFLVGGYLRDTLMGRKPGDIDL-ATDAKPKDVTALFGAKYTLETGVKHGSVTVMSDGL 78 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 E R+E + +VT +DL+RRD T+NA+A + +IDP G Sbjct: 79 PIEVTTFRSEGAYADKRHPNSVSFLTNVT--EDLRRRDFTVNAMAWNPEHGLIDPVGGRE 136 Query: 115 DLQNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DLQ R +R V F ED LR+LR RFA+ L F I + T + LE+ Sbjct: 137 DLQRRRIRCVGNPDERFAEDGLRILRALRFAS---LLNFSIDPRADEALNRFTSS--LEN 191 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ++ RVW E P F + PE+ L + Sbjct: 192 VSVPRVWHELSLFFQGVRPGRLFAS--HLPVFAAVIPELAFLCD--------NSPLSFQA 241 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLC-QRLRV 290 + + +R A L + L + + RL+ Sbjct: 242 ATDAARWLDAVPQDLPLRLAALFSAVAPD-------------QQEAAFLAKSVLEDRLQT 288 Query: 291 PNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLA-LTSEADVRGR 349 R + + ++ + P L ++ + + + S+ + G Sbjct: 289 DRNTRRAVQSLLKY----PAIALKTPDEARALLKAVGRETALDWLGLVLPILSQQEGEGT 344 Query: 350 TGFESADYPQGRWLREAWEVAQSVPTKAVVEAG-FKGVEIREELTRR 395 + SA L + +V +++ G G I E L+ Sbjct: 345 SRILSAVLECNLPLDVSQ---LAVKGSDLIDLGCLPGPLIGEILSTL 388 >UniRef50_A8FEH9 CCA-adding enzyme n=5 Tax=Bacillus RepID=CCA_BACP2 Length = 400 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 99/404 (24%), Positives = 157/404 (38%), Gaps = 43/404 (10%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFL--HPQTHEE 57 + Y VGGAVRD LLG + D D + +TP + + V G++ + H E Sbjct: 21 QAYFVGGAVRDVLLGREIGDID-IATDATPDTVESLFEKTVDVGKEHGTVIVLHDGMSYE 79 Query: 58 YALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 RTE + A +L++DL RRDLTINA+A D NGEIID G D++ Sbjct: 80 VTTFRTESEYEDFRRPK--EVAFITSLKEDLLRRDLTINAMAMDINGEIIDHVGGKQDIE 137 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 + ++ V F ED LR++R RF ++ LGF +A ET M + H L +++ Sbjct: 138 RKRIQTVGDPACRFQEDALRMMRAIRFLSQ---LGFELAAETAEAMEKDKH--LLANISV 192 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEI--DALFGVPAPAKWHPEIDTGIHT 232 ER E E L R + +VL L P + D L ++ Sbjct: 193 ERKKIEMEKLLKGRYCERAIKVLISTKLYEEL-PGLEKDRLQDSFQTFPYY--------- 242 Query: 233 LMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPN 292 L ++ + + H LG L+ + +K + + V Sbjct: 243 ---------LLDGLEEVWGAVIHLLGLDEEKAVLFLKEWKLSTKLLKDAVAISRY--VDC 291 Query: 293 EIRDLARLVAEFHDLIH--TFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRT 350 E A H L+ L + + FD ++A + + + V G+ Sbjct: 292 EWNAEKMFEAGEHVLLSSLKITQLKHERRI-FFDELEAAKSSYDALPIKTLQDLAVSGKD 350 Query: 351 GFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTR 394 G+W+ E ++ + +E + I E LT Sbjct: 351 LMAFRQKTSGKWIAEELDLVKKAVLHNHLEN--RKEAIEEWLTA 392 >UniRef50_B0B8T0 PolyA polymerase n=14 Tax=Chlamydiaceae RepID=B0B8T0_CHLT2 Length = 410 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 86/410 (20%), Positives = 144/410 (35%), Gaps = 49/410 (11%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQ--VGRDFPVFLHPQTHEEYA 59 + Y VGG+VRD LLG P+++ D + ++P + +G F + + + + Sbjct: 22 QAYFVGGSVRDMLLGRPIEEVD-IATNASPTIVTTIFPDTLSIGAAFGIIAVKENGQLFE 80 Query: 60 LARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQN 118 +A T R G +++DD RRD TIN + D ++ D G DL+ Sbjct: 81 VA-TFRSDEDYEDGRHPNRVVFASMKDDAIRRDFTINGMYYDPFEEKLFDLVEGRADLER 139 Query: 119 RLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH-LTP 174 +++R + F ED LR+LR RFAA LGF + +T + + L + + P Sbjct: 140 KIIRAIGHPKQRFLEDKLRILRAIRFAA---TLGFALDPQTEQAI--IKELPSLPNSVAP 194 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ER+W+E + L T P Q+L L +LFPE+ Sbjct: 195 ERIWQELKKMLRT-APYESLQLLTKLKVLPILFPELK----------------------- 230 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEI 294 +S +R A PE+ + + RLRV N+ Sbjct: 231 -------VSSSGFLRSAIAFAQKIHDSQIPEIALLLPLFREVDKEKALEAFSRLRVSNKE 283 Query: 295 RDLARLVAEFHDLIHTFPMLNPKTIVK-LFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 L + L N K F S + + + + Sbjct: 284 LKLLEDW--YAALPQFLSKQNDKFFWAHFFASETSSLLLSLFLSMQRSPDEQELFIARIH 341 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVVEAGFK-GVEIREELTRRRIAAVAS 402 ++ A V + ++ G G + E L ++ Sbjct: 342 DLKTRLAAFIERIQSGAPLVSAQDLIAKGITPGRLLGELLREAEALSIEH 391 >UniRef50_A7VVB9 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVB9_9CLOT Length = 422 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 80/420 (19%), Positives = 134/420 (31%), Gaps = 83/420 (19%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAG----YQQVGRDFPVFL--HPQT 54 + Y VGG VRD LLG +D D+ V + P E A G Sbjct: 49 FEAYAVGGCVRDMLLGKKPEDYDFAV-SALPDETKQALNGVPVFDTGLRHGTVTAVVDGH 107 Query: 55 HEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLG 114 E RTE +L +DL RRD T+NA+A ++D + G Sbjct: 108 AAEITTYRTESGYSDFRRPD--KVGFTRSLSEDLSRRDFTVNAMAFHPERGLVDCFGGKE 165 Query: 115 DLQNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEH 171 DL+NR+L+ V F ED LR+LR RF++ L F I ++T + + H L+ Sbjct: 166 DLKNRILKCVGEPERRFREDALRILRCLRFSS---ALEFAIEEDTRQAL--LKHRELLKK 220 Query: 172 LTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 + PER+ E + + +V PE Sbjct: 221 IAPERLQAEFSKLILGEWAEQVLT--EYLPVFQVFLPE---------------------- 256 Query: 232 TLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVP 291 S + L + +R A + T + +RLR Sbjct: 257 AGQRRSALSWLPAEKKLRLAGVFSGCTPDET-------------------ARALERLRYD 297 Query: 292 NEIRDLARLVAEFHDLIHTFPMLNPKTIVKLF-----DSIDAWRKPQRVEQLALTSEADV 346 + + + + + +V L + + +R+ + + Sbjct: 298 GKTIRTVTTLERYRQVPLETDRRQARKLVFLLGMETAEELLRFREEPELLKWLEVIRGQG 357 Query: 347 RGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGF-KGVEIREELTRRRIAAVASWKE 405 + + SV + ++ G+ +G I + L R + E Sbjct: 358 LCCSLSQ-----------------LSVNGEDLIRLGYPEGKGIGKALNRLLQLVLDETLE 400 >UniRef50_A8UAQ7 Poly A polymerase n=1 Tax=Carnobacterium sp. AT7 RepID=A8UAQ7_9LACT Length = 400 Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats. Identities = 78/416 (18%), Positives = 134/416 (32%), Gaps = 72/416 (17%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQV--GRDFPVFLHPQTH--E 56 + Y VGG+VRD LL + D D + + P E+ + + G + + Sbjct: 23 FEAYFVGGSVRDTLLKETINDVD-IATSAKPDEIKQIFQKTIDVGIEHGTVMVLWKDATY 81 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE +L++DLKRRD TINALA + +G+IID + G DL Sbjct: 82 EITTFRTESTYQDFRRPDNVEFVR--SLKEDLKRRDFTINALAMNRDGQIIDYFEGQTDL 139 Query: 117 QNRLLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 + +L++ V F ED LR++R RF ++ L F + ET +++ + LE + Sbjct: 140 EKKLIKAVGNPEERFFEDALRMMRGVRFVSQ---LNFEMDRETELAIQK--NHPLLEKIA 194 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ER+ E L + ++ P + L Sbjct: 195 IERIQVEFTKLLLGSGRKKGLELFIRTNLF-YYCPGLKDQKK----------------AL 237 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 + V + L + L K E + + + Sbjct: 238 EEFAKLECTIDNRIVAWTMLIYYLSK---------------SKPASEAEPFLRAWKCSKK 282 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEAD------VR 347 R + L ++ Q + Q+ L D Sbjct: 283 EIAQVR-----------------SALFALEQRLNDTFNSQVLYQVGLPIALDVEKIMACL 325 Query: 348 GRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAG--FKGVEIREELTRRRIAAVA 401 G T + + L + + + A G + + + A +A Sbjct: 326 GHTASFERIHSMYQGLPIYNKKEIKINGNDLQAALNRKPGKWLGDLMIEMETAILA 381 >UniRef50_B1YHR1 Polynucleotide adenylyltransferase region n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=B1YHR1_EXIS2 Length = 379 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 80/405 (19%), Positives = 133/405 (32%), Gaps = 78/405 (19%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYALA 61 + Y+VGGAVRD LL D D P+ ++ + + Sbjct: 18 EAYIVGGAVRDMLLKREPGDYDL-ATSLLPEAVMHLFPVVIPTGLDHGTVTVVLDHVPFE 76 Query: 62 RTERKSGSGYTGFTCYAAP--DVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQNR 119 T +S S Y+ V+LE+DL RRD TINA+A G ++D + G DL + Sbjct: 77 VTTFRSESTYSDRRRPDEVTLGVSLEEDLTRRDFTINAMALKPTG-LVDLFGGQADLATK 135 Query: 120 LLRHVS---PAFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 ++R V F ED LR++R RF ++ L F + ET + L + ER Sbjct: 136 VVRTVGRAEDRFDEDALRMIRAFRFMSQ---LEFTLDPETERAIENKKQH--LSSVAVER 190 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTL 236 + E E L + +R G P D +H LM L Sbjct: 191 IAIEFEKLLLGPGRKAALAAMRRTGI-GHYMP---------------HMNDVILHQLMLL 234 Query: 237 SMAAMLSPQVD-VRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIR 295 + V + H + + + + Sbjct: 235 PFNGVSPDDVWTLVLVAGLHP--------------------------ESLRAWKRSKKQE 268 Query: 296 DLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESA 355 A+ A + L+ +L + ++ L + GR Sbjct: 269 GRAKTFA----PLVHEQTLSDWQRYRL--------SDEELDHLNQMTGYRHEGRASL--- 313 Query: 356 DYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRRRIAAV 400 R L++ +V + +++ G + +I+E L V Sbjct: 314 ---PIRRLQDL-----TVNGRDMMDLGLRKHQIKEALHHLEQQVV 350 >UniRef50_C6CUG0 Polynucleotide adenylyltransferase region n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CUG0_PAESJ Length = 417 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 90/402 (22%), Positives = 151/402 (37%), Gaps = 57/402 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVG----RDFPVFLHPQTHE 56 + VGG VRD +GLP+KD D + + P++++ + + LH Sbjct: 26 FEAVFVGGCVRDTAMGLPIKDVD-IATSARPEQVMSIFPRCIPTGLQHGTVTVLHDGGSY 84 Query: 57 EYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDL 116 E RTE + L+ DL RRDLTINA+A + GE+ DP+ GL DL Sbjct: 85 EVTTFRTESEYEKHRRPLQVEFI--DRLDGDLLRRDLTINAMAMNAAGELYDPFRGLNDL 142 Query: 117 QNRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLT 173 +NR +R V F ED LR+LR RFA+++ F IA T + + H L H+ Sbjct: 143 KNRTIRCVGDADARFQEDALRMLRTIRFASQFE---FTIAHTTWRAL--VRHRELLRHIA 197 Query: 174 PERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTL 233 ERV E + + +P +L LR + A + + E+D Sbjct: 198 MERVHAELDRMIGGAHPGRALHLLAASKLLRYTGTVLPAAEKLAQVDPSYSELDKL---- 253 Query: 234 MTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQRLRVPNE 293 D R+A L G L+ E+ + LR+P + Sbjct: 254 ----------NDPDARYAALLLAEGITLSD-----------------AEETLKALRLPTQ 286 Query: 294 IRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFE 353 + V ++ + +V ++ + + L++ + Sbjct: 287 KMNAILSVLFVQFAMNQLNQQSGLRLV-WTSTVLQYGEEASRRWLSIVVW-------NQK 338 Query: 354 SADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREELTRR 395 + Q + + ++ + + G ++ EEL R Sbjct: 339 HHLHDQKNLFDKWLDAMPAMT---LKQLNLNGKQLAEELQRV 377 >UniRef50_Q6ASD5 Related to poly(A) polymerase n=1 Tax=Desulfotalea psychrophila RepID=Q6ASD5_DESPS Length = 882 Score = 233 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 85/426 (19%), Positives = 141/426 (33%), Gaps = 50/426 (11%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFP--------VFLHP 52 K + VGG VRD LL D D VV G+ G+ FP V L Sbjct: 480 FKAFAVGGFVRDLLLKTANLDLDIVVEGNGIAFAKKVAEHFKGKFFPHEKFLTATVTLPN 539 Query: 53 QTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDN----GEIID 108 + A AR E +++ DL RRD +INA+A N G +ID Sbjct: 540 DFKIDIATARLEYYESPAAMPMIQL----SSIKLDLSRRDFSINAMALQINREQFGTLID 595 Query: 109 PYNGLGDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAG 167 +N DL+N+++R + +F EDP R+ R RF R + F I T L+ Sbjct: 596 YFNSQSDLRNQVIRVLHNLSFVEDPSRIFRAIRFEKR---MNFHIGPHTKGLIGNAVAMN 652 Query: 168 ELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEID 227 R E + ++P L + G + L+P++ + Sbjct: 653 LFGKSRDSRFLSELKIIFKEKDPLGPLVRLAEFGLFQYLWPDLRPNYRTDRR-------- 704 Query: 228 TGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPAGVKLVEQLCQR 287 H + A +++ K + +G + ++ C R Sbjct: 705 -FCHGIRQTKAAIKKLYEIE----------PKAKIDKSVAFLLTIFHRSGPEEIQAFCNR 753 Query: 288 LRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRVEQLALTSEADVR 347 +I + D + + P +L + E L + Sbjct: 754 FNEEEKICKKLLQTKQRCDALLPI-LYTPMAKSEL----HQHLQDLNYEDLLYICSVAKK 808 Query: 348 GRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGF-KGVEIREELTRRRIAAVASWKEQ 406 DY L + + + K ++E G+ +G + E L + A + Sbjct: 809 SHIHKSVLDY-----LCQLRHIKPLLKGKDLMEMGYPRGPKFSEILNSLKRAKMDGLVSS 863 Query: 407 RCPKPE 412 R + E Sbjct: 864 RADEEE 869 >UniRef50_A6TJG8 Polynucleotide adenylyltransferase/metal dependent phosphohydrolase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TJG8_ALKMQ Length = 472 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 97/452 (21%), Positives = 175/452 (38%), Gaps = 67/452 (14%) Query: 1 MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEYAL 60 + IYLVGG++RD LL +KD D ++ + + G F + ++ + Sbjct: 17 IDIYLVGGSIRDFLLNRNIKDLDLIIKEDPGRFAEKIAKELQGSYFVL------DQDRGI 70 Query: 61 ARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-------NGEIIDPYNGL 113 R + K G + DL +RD TINA+A ++IDPY G Sbjct: 71 HRVKVKDGITID---LAKFQGEDILADLAKRDYTINAMAYPLESGWPIDESQLIDPYGGQ 127 Query: 114 GDLQNRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHL 172 D++ +++R +S F +DP+R+LR R + L F + DET ++ + + Sbjct: 128 QDIKEKVIRQISEKNFQQDPIRMLRGPRLMGQ---LDFEMDDETKKSIQ--RNCLLINEA 182 Query: 173 TPERVWKETESALTTRNPQVFFQVLR-DCGALRVLFPEIDALFGVPAPAKWHPEIDTGIH 231 ER+ E + L N + + L + L +FPEI + V K+H +D H Sbjct: 183 PGERIATEIFTLLGEENTHEYLEFLDKELHVLDKIFPEIINMKDVGQ-CKYHV-VDCWTH 240 Query: 232 TLMTLSMAAML---------------------------SPQVDVRFATLCHDLGKGLT-- 262 +L T+ +A M+ + ++ L HD+GK Sbjct: 241 SLYTMRIAEMVIYHQGFFENHIREAYEVHTSKKVAGEHTRLQLIKLGALFHDIGKPSAQK 300 Query: 263 -PPELWPRHHGHGPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHD---LIHTFPMLNPKT 318 R GH G ++V+ ++L++ + + + E H +++ ++ K Sbjct: 301 VDETGRVRFRGHEITGAEIVKVYGEKLKLSVKEQQMLYRYIELHMGPLVLYKSNDVSGKA 360 Query: 319 IVKLFDSIDAWRKPQRVEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTK-- 376 + KLF + + + L + AD+ + G + +A + T+ Sbjct: 361 LYKLFKEMG-----EETLDILLIAFADIVATRKLLDPEEEMGMFKIHIEYIANNYITRYK 415 Query: 377 --AVVEAGFKGVEIREELTRRRIAAVASWKEQ 406 + G EI E L V E+ Sbjct: 416 PIENISHIISGKEIMETLNLPEGILVGEIVEE 447 >UniRef50_Q0FDP1 Poly A polymerase family protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FDP1_9RHOB Length = 383 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 84/351 (23%), Positives = 130/351 (37%), Gaps = 23/351 (6%) Query: 2 KIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEY--- 58 ++ VGG VR++LLGLP+ D D + + P E+++ + + P ++ T Sbjct: 26 QVLFVGGCVRNSLLGLPITDID-ISTNARPDEIINLAKKAGLKSIPTGINHGTITIISNN 84 Query: 59 -ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDDNGEIIDPYNGLGDLQ 117 A T + G A +EDD +RRD TINA+ +G IIDP NG+ DL+ Sbjct: 85 KAFEVTSFRKDIKTDGRHATVAYSDKIEDDAERRDFTINAIYMTTDGIIIDPLNGMKDLK 144 Query: 118 NRLLRHVSP---AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTP 174 R +R + ED LR+LR RF A Y I E L+ + + L Sbjct: 145 KRHVRFIKDPNKRIIEDYLRILRFFRFTAEYGDPDLGIDAEGLSAC--AANIDGIALLAK 202 Query: 175 ERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWHPEIDTGIHTLM 234 ERV E L T+NP + G L + P A +P H E I+ + Sbjct: 203 ERVGSEIRKILKTQNPSSVLAAMEISGILSNILPG-TACKNMP--TLIHLENKNTINWIT 259 Query: 235 TLSMAAMLSPQVDVRFATLCHDLGK--------GLTPPELWPRHHGHGPAGVKLVEQLCQ 286 L + P +R + + K G P + + L Sbjct: 260 RLIVLGGADPTNSLRLSNKENKEYKSTLKAINMGEKPSAISFKFGEIIAYSYSLAIAALT 319 Query: 287 RLRVPNEIRDLARL--VAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQRV 335 PN++ D +F L K + + + + Sbjct: 320 ETSPPNDLSDQIAKGSSVKFPIKPQDLHNLEGKQLGDMLKKLKSIWIKSDF 370 >UniRef50_Q97M87 PolyA polymerase n=1 Tax=Clostridium acetobutylicum RepID=Q97M87_CLOAB Length = 458 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 86/438 (19%), Positives = 171/438 (39%), Gaps = 65/438 (14%) Query: 1 MKIYLVGGAVRDALLGLPVK--DRDWVVVGSTPQEMLDAGYQQVGRDFPVFLHPQTHEEY 58 M+ Y+VGG +RD L+ D D G + + + +++ ++ Sbjct: 17 MEAYIVGGYIRDKLMNPKNSASDLDIAFQGDFEKILDELRKRKI-------KVSSIKKDS 69 Query: 59 ALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD-NGEIIDPYNGLGDLQ 117 ++ R + +DL +RD T+NA+A D N +I+DP++G ++ Sbjct: 70 SVYRITVNG----YCADISKIKGKNINEDLSKRDFTVNAIALDIKNNKIVDPFDGRVHIK 125 Query: 118 NRLLRHVSP-AFGEDPLRVLRVARFAARYAHLGFRIADETLALMREMTHAGELEHLTPER 176 R+L+ + +F +D +R+LR RF +Y G T +R+ H+ + +R Sbjct: 126 RRILQVIDEKSFEDDAVRILRGIRFYIKY---GMHFNGYTEEYIRK--HSKNIMKFPRDR 180 Query: 177 VWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPAPAKWH-----PEIDTGIH 231 V E + VFF+V+ L+ + P ++ L V K H ++T H Sbjct: 181 VLDEIIHIIHEDENGVFFEVMDQYMILKNILPYMEELKTV-GKCKHHLVDAFTHMNTAYH 239 Query: 232 TLMTLSMAAMLSPQVD----------------VRFATLCHDLGKGLTPPE--LWPRHHGH 273 + + ++ + FA HD+GK ++ + GH Sbjct: 240 VFKDMKKKYLKVKNINIEEFNKDIGVYNELDYLAFAIFTHDIGKYVSYKKEGQKISFKGH 299 Query: 274 GPAGVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTI----VKLFDSIDAW 329 G++++E++C L+ PN+ + + V + H L + F+ D + Sbjct: 300 DEKGLEIIEKVCDELKFPNDGKKIVCSVVKNHMYPLMLFKLKEDERKQEEYEFFNKFDQY 359 Query: 330 RKPQRVEQLALTSEADVRGRTGFESADYPQGR---WLREA---------WEVAQSVPTKA 377 V + + S DV T + + + R ++ E + + + Sbjct: 360 -----VPHIIVASFCDVYATTIYIDENNEKDRFTSFISELVVKYREFINLKKIKYIDGND 414 Query: 378 VVEAGFKGVEIREELTRR 395 +++ GF+G +I L Sbjct: 415 LIDMGFRGNDIGNILNEL 432 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.154 0.464 Lambda K H 0.267 0.0473 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,681,819,337 Number of Sequences: 3077464 Number of extensions: 130832552 Number of successful extensions: 356876 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1469 Number of HSP's successfully gapped in prelim test: 841 Number of HSP's that attempted gapping in prelim test: 346687 Number of HSP's gapped (non-prelim): 2844 length of query: 412 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 281 effective length of database: 637,248,572 effective search space: 179066848732 effective search space used: 179066848732 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 95 (41.0 bits)