374 c1mkyA_ Probab=95.58   E-value=0.16  Score=28.13  Aligned_columns=99  Identities=18%

Q ss_pred             EEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECHHCCHHHCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCH
Q ss_conf             99987999889899999956875871169988888022897561111012333222211011000012222334458878
Q batch____        31 VALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNA  110 (365)
Q Consensus        31 ~~i~G~nGsGKSTLl~~l~G~~~p~~G~I~~~G~~~~~~~~~~~~i~~~~q~~~l~~~~~v~~~~~~~~~~~~~~~~~~~  110 (365)
                      ++|+|..++|||||++.|+|  ...++...+.|..                                             
T Consensus         3 VaivG~pNvGKStL~N~ltr--~~~~~~~~~~g~~---------------------------------------------   35 (407)
T c1mkyA_           3 VLIVGRPNVGKSTLFNKLVK--DPVQDTVEWYGKT---------------------------------------------   35 (407)
T ss_dssp             EEEECCTTSSHHHHHHHHHC--CCSEEEEEETTEE---------------------------------------------
T ss_pred             EEEECCCCCCHHHHHHHHHC--CCEEEEEEECCEE---------------------------------------------
T ss_conf             99977998888899999849--9639999759989---------------------------------------------


Q ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf             99986568764214851021002200587325789999985169739999672118998999999999999998729824
Q batch____       111 AAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTS  190 (365)
Q Consensus       111 ~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~lAral~~~p~illlDEP~~~LD~~~~~~i~~~l~~l~~~~g~tv  190 (365)
                                +..++..++.+.....+.....+.+.  .++-.---++++=+...++.+..     ..+.++.++.++.+
T Consensus        36 ----------~~lvDTpG~~~~~~~~~~~~~~~~~~--~~i~~aDlil~VvD~~~~~~~~d-----~~i~~~Lr~~~k~~   98 (407)
T c1mkyA_          36 ----------FKLVDTCGVFDNPQDIISQKXKEVTL--NXIREADLVLFVVDGKRGITKED-----ESLADFLRKSTVDT   98 (407)
T ss_dssp             ----------EEEEECTTTTSSGGGCCCHHHHHHHH--HHHTTCSEEEEEEETTTCCCHHH-----HHHHHHHHHHTCCE
T ss_pred             ----------EEEEECCCCCCCCHHHHHHHHHHHHH--HHHHHCCEEEEEECCCCCCCHHH-----HHHHHHHHHHCCCC
T ss_conf             ----------99995567310787799899999999--99986798999971898789879-----99999998612543


Q ss_pred             EEE
Q ss_conf             787
Q batch____       191 VFV  193 (365)
Q Consensus       191 i~v  193 (365)
                      +++
T Consensus        99 ilv  101 (407)
T c1mkyA_          99 ILV  101 (407)
T ss_dssp             EEE
T ss_pred             CCC
T ss_conf             001