Phyre 2 alignment of P39301 with d1pk8a1

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Job Description | P39301
Confidence | 1.81% | Date | Thu Jan 5 11:59:07 GMT 2012
Rank | 93 | Aligned Residues | 24
% Identity | 29% | Template | d1pk8a1
SCOP info | PreATP-grasp domain | PreATP-grasp domain | Synapsin domain
Resolution | 2.10

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 441 | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | Y | M | F | F | A | G | R | A | L | R | A | E | E | D | A | E | K | Q | L | A | E | Q | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | W | A | K | Y | F | K | G | K | K | I | H | G | E | I | D | I | K | V | E | Q | A | E | F | S
Template Known Secondary structure |  |  |  |  |  |  | T | T |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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