18/01/2012 07:11:56 : INFO  : Run start: Wed Jan 18 07:11:54 GMT 2012
18/01/2012 07:12:06 : INFO  : Initialised job
18/01/2012 07:12:09 : INFO  : Renaming log file 'phyre2_20120118_071153.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/930d74af5bac7008/phyre_20120118_071153.log'
18/01/2012 07:12:11 : INFO  : Initialised job:
Sequence
>batch____
MEILYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSG
ILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVL
LRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKP
TQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVM
TIFFGAILLSFGIDTVQAMAGKVHWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNG
ISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPM
FFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPM
MQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQSA

18/01/2012 07:12:13 : INFO  : Checked sequence
18/01/2012 07:12:18 : INFO  : Finding homologues with PSI-BLAST
18/01/2012 07:12:20 : INFO  : PSI-BLAST 3 iterations
18/01/2012 07:15:35 : INFO  : PSI-BLAST 5 iterations
18/01/2012 07:18:10 : INFO  : Finished PSI-BLAST
18/01/2012 07:18:14 : INFO  : Running Buildali to generate a3m file
18/01/2012 07:31:17 : INFO  : Converting to HMM
18/01/2012 07:31:21 : INFO  : Calibrating HMM
18/01/2012 07:31:47 : INFO  : Searching HMM database
18/01/2012 07:41:33 : INFO  : Finished buildali
18/01/2012 07:41:36 : INFO  : Predicting secondary structure
18/01/2012 07:41:51 : INFO  : Predicted secondary structure (PSI-Pred)
18/01/2012 07:41:56 : INFO  : Predicting Disordered regions
18/01/2012 07:42:04 : INFO  : Predicted Disorder (Disopred)
18/01/2012 07:42:07 : INFO  : Running memsat_svm check
18/01/2012 07:42:34 : INFO  : Globular protein
18/01/2012 07:42:36 : INFO  : Predicted Transmembrane (memsat_svm) ID '930d74af5bac7008'
18/01/2012 07:42:40 : INFO  : Initialising fold library search
18/01/2012 07:42:47 : INFO  : Initialised search input
18/01/2012 07:42:51 : INFO  : Building Ensemble models
18/01/2012 07:42:58 : INFO  : Building hh.c3qnqD_.model.1.pdb
18/01/2012 07:43:28 : INFO  : Building hh.d2oara1.model.2.pdb
18/01/2012 07:43:54 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/930d74af5bac7008/hh.d2oara1.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/930d74af5bac7008/d2oara1.2.pdb
18/01/2012 07:44:02 : INFO  : Building hh.c2oarA_.model.3.pdb
18/01/2012 07:44:28 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/930d74af5bac7008/hh.c2oarA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/930d74af5bac7008/c2oarA_.3.pdb
18/01/2012 07:44:36 : INFO  : Building c3qnqD_.1.pdb
18/01/2012 07:45:05 : INFO  : Building d2oara1.2.pdb
18/01/2012 07:45:33 : INFO  : Building c2oarA_.3.pdb
18/01/2012 07:46:03 : INFO  : Building c3hzqA_.4.pdb
18/01/2012 07:46:33 : INFO  : Building d5ruba2.5.pdb
18/01/2012 07:47:04 : INFO  : Building d1gk8a2.6.pdb
18/01/2012 07:47:34 : INFO  : Building d1bwva2.7.pdb
18/01/2012 07:48:03 : INFO  : Building d1rbla2.8.pdb
18/01/2012 07:48:31 : INFO  : Building d2d69a2.9.pdb
18/01/2012 07:48:59 : INFO  : Building c2kncA_.10.pdb
18/01/2012 07:49:29 : INFO  : Building d8ruca2.11.pdb
18/01/2012 07:49:59 : INFO  : Building c2bbjB_.12.pdb
18/01/2012 07:50:28 : INFO  : Building d1bxna2.13.pdb
18/01/2012 07:50:59 : INFO  : Building d1geha2.14.pdb
18/01/2012 07:51:31 : INFO  : Building d1svda2.15.pdb
18/01/2012 07:52:03 : INFO  : Building d1otsa_.16.pdb
18/01/2012 07:52:32 : INFO  : Building d1ej7l2.17.pdb
18/01/2012 07:53:02 : INFO  : Building c2zviB_.18.pdb
18/01/2012 07:53:31 : INFO  : Building d1wdda2.19.pdb
18/01/2012 07:54:01 : INFO  : Building c1w2wJ_.20.pdb
18/01/2012 07:56:09 : INFO  : Finished HH model building
18/01/2012 07:56:13 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
18/01/2012 07:58:10 : INFO  : html domain output complete ID '930d74af5bac7008'
18/01/2012 08:13:43 : INFO  : Run end  : Wed Jan 18 08:13:41 GMT 2012
