Phyre 2 alignment of P39301 with c1gehE_

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Job Description | P39301
Confidence | 3.67% | Date | Thu Jan 5 11:59:07 GMT 2012
Rank | 44 | Aligned Residues | 29
% Identity | 28% | Template | c1gehE_
PDB info | PDB header:lyase | Chain: E: PDB Molecule:ribulose-1,5-bisphosphate carboxylase/oxygenase; | PDBTitle: crystal structure of archaeal rubisco (ribulose 1,5-bisphosphate2 carboxylase/oxygenase)
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 198 | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |  |  |  | . | . | . | . | . | 220 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | A | S | W | I | A | Y | K | V | A | P | F | L | G | K | K | E | . | . | . | E | S | V | E | D | L | K | L | P | G | W | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | P | G | L | L | A | S | I | A | G | N | I | F | G | M | K | R | V | K | G | L | R | L | E | D | L | Y | F | P | E | K | L
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | S | G | G | G | G |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 101 | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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