322 c1sjaA_ Probab=62.85   E-value=12  Score=18.03  Aligned_columns=161  Identities=16%

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEC---CCHHHH
Q ss_conf             14788656898999999999998799799987833789876689689999999999999974498499977---998999
Q batch____        27 SFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDT---SKPEVI  103 (282)
Q Consensus        27 SFsdgg~~~~~~~a~~~a~~~~~~GAdiIDIG~eSTrPga~~v~~~eE~~rl~p~i~~i~~~~~vpISIDT---~~~~v~  103 (282)
                      ..+-.+...++++..+.++++.+.|-.-+-+-          ++.+++.+++..+-+.+-.  ++.+.+|-   |.++.+
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~KiK----------ig~~~d~~~i~~ir~~~g~--~~~l~vDaN~~~~~~~a  199 (368)
T c1sjaA_         132 CGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLK----------IEPGWDVEPVRAVRERFGD--DVLLQVDANTAYTLGDA  199 (368)
T ss_dssp             BCEEECCCSSHHHHHHHHHHHHHHTCSCEEEE----------CBTTBSHHHHHHHHHHHCS--SSCEEEECTTCBCGGGH
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHCCCCEEEEE----------CCHHHHHHHHHHHHHHCCC--CCEEEEECCCCCCHHHH
T ss_conf             28993177999999999999996799799997----------7877999999999996499--97899976888989999


Q ss_pred             HHHHHC---CCCEEECCCCCCC-HHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
Q ss_conf             999970---9946870766888-879999997299499987898998711077500179999999999999999769987
Q batch____       104 RESAKV---GAHIINDIRSLSE-PGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAK  179 (282)
Q Consensus       104 ~aal~~---G~~iINdvsg~~d-~~~~~~~a~~~~~vVlmh~~g~p~~~~~~~~~~~~~~e~~~~l~~~i~~a~~~GI~~  179 (282)
                      ..-.+.   +..+|=+=---.+ +.+..+.+.++.|+.+                    .|-...++.....+...++. 
T Consensus       200 ~~l~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~~pia~--------------------dEs~~~~~~~~~~~~~~~~d-  258 (368)
T c1sjaA_         200 PQLARLDPFGLLLIEQPLEEEDVLGHAELARRIQTPICL--------------------DESIVSARAAADAIKLGAVQ-  258 (368)
T ss_dssp             HHHHTTGGGCCSCEECCBCTTCHHHHHHHTTTCSSCEEE--------------------STTCCSHHHHHHHHHHTCCS-
T ss_pred             HHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHCCCEEEE--------------------CCCCCCHHHHHHHHHCCCCC-
T ss_conf             999973338815811888806788899999874982984--------------------77648999999999729997-


Q ss_pred             HHEEEECCC--CCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Q ss_conf             678880788--7647978999999989999966998899635446877673
Q batch____       180 EKLLLDPGF--GFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLL  228 (282)
Q Consensus       180 ~~IilDPGi--Gf~k~~~~~~~ll~~i~~~~~lg~Pil~G~SrKsfig~~~  228 (282)
                       =+.+||+-  |+...       ++-....+..|.+++++..--|-+|...
T Consensus       259 -~i~~k~~~~GGi~~~-------~~~~~~A~~~gi~~~~~~~~~s~ig~aa  301 (368)
T c1sjaA_         259 -IVNIKPGRVGGYLEA-------RRVHDVCAAHGIPVWCGGMIETGLGRAA  301 (368)
T ss_dssp             -EEEECTTTTTSHHHH-------HHHHHHHHHTTCCEEECCCSCCHHHHHH
T ss_pred             -EEEECHHHCCCHHHH-------HHHHHHHHHCCCEEEECCCCCCHHHHHH
T ss_conf             -998150004886899-------9999999973982998287860799999