BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (422 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P04152 Protein umuC n=103 Tax=Gammaproteobacteria RepID... 516 e-145 UniRef50_A0L9G4 DNA-directed DNA polymerase n=1 Tax=Magnetococcu... 461 e-128 UniRef50_A4SWQ9 DNA-directed DNA polymerase n=13 Tax=cellular or... 461 e-128 UniRef50_A1U8F5 DNA-directed DNA polymerase n=6 Tax=Gammaproteob... 456 e-126 UniRef50_Q5N669 DNA polymerase V n=9 Tax=Bacteria RepID=Q5N669_S... 453 e-126 UniRef50_B7JBK8 UmuC protein n=1 Tax=Acidithiobacillus ferrooxid... 451 e-125 UniRef50_B8FBE8 DNA polymerase IV n=1 Tax=Desulfatibacillum alke... 446 e-123 UniRef50_C0QCD0 UmuC1 n=3 Tax=Desulfobacterium autotrophicum HRM... 443 e-123 UniRef50_B0VH44 Protein umuC n=1 Tax=Candidatus Cloacamonas acid... 443 e-123 UniRef50_C0GDP3 DNA-directed DNA polymerase n=1 Tax=Dethiobacter... 442 e-122 UniRef50_D2QVG5 DNA-directed DNA polymerase n=1 Tax=Spirosoma li... 439 e-121 UniRef50_Q0VP68 DNA-damage-inducible protein n=4 Tax=Proteobacte... 438 e-121 UniRef50_Q11V03 Nucleotidyltransferase/DNA polymerase involved i... 436 e-121 UniRef50_A1BFA1 DNA-directed DNA polymerase n=7 Tax=Chlorobiacea... 435 e-120 UniRef50_Q39ZU3 Damage-inducible protein DinP n=1 Tax=Pelobacter... 434 e-120 UniRef50_Q5ZUT9 SOS mutagenesis and repair UmuC protein n=12 Tax... 433 e-120 UniRef50_Q3ABL2 DNA polymerase IV n=4 Tax=Firmicutes RepID=DPO4_... 433 e-120 UniRef50_C6CYA7 DNA-directed DNA polymerase n=3 Tax=Bacillales R... 432 e-120 UniRef50_C6M791 Protein UmuC n=2 Tax=Neisseria RepID=C6M791_NEISI 432 e-120 UniRef50_C8X192 DNA-directed DNA polymerase n=2 Tax=Deltaproteob... 431 e-119 UniRef50_Q0AX85 DNA-directed DNA polymerase n=1 Tax=Syntrophomon... 431 e-119 UniRef50_Q11QJ9 Nucleotidyltransferase/DNA polymerase involved i... 431 e-119 UniRef50_A9E9W4 Nucleotidyltransferase/DNA polymerase involved i... 430 e-119 UniRef50_C6XDV2 DNA-directed DNA polymerase n=2 Tax=Methylovorus... 429 e-119 UniRef50_Q2W5K5 Nucleotidyltransferase/DNA polymerase involved i... 429 e-118 UniRef50_A6ET82 Nucleotidyltransferase/DNA polymerase involved i... 429 e-118 UniRef50_C3X802 DNA-directed DNA polymerase n=1 Tax=Oxalobacter ... 429 e-118 UniRef50_B4YK21 TumC n=1 Tax=Tetrathiobacter kashmirensis RepID=... 428 e-118 UniRef50_B5JVF1 UmuC protein n=1 Tax=gamma proteobacterium HTCC5... 427 e-118 UniRef50_P07375 Protein mucB n=137 Tax=root RepID=MUCB_ECOLX 426 e-118 UniRef50_C7RB82 DNA-directed DNA polymerase n=1 Tax=Kangiella ko... 426 e-118 UniRef50_Q48B37 RulB protein n=30 Tax=Pseudomonas RepID=Q48B37_P... 426 e-118 UniRef50_A5FIG7 DNA-directed DNA polymerase n=10 Tax=cellular or... 425 e-117 UniRef50_Q1QXT4 DNA-directed DNA polymerase n=1 Tax=Chromohaloba... 425 e-117 UniRef50_C8X3R0 DNA-directed DNA polymerase n=1 Tax=Desulfohalob... 424 e-117 UniRef50_B9M459 DNA-directed DNA polymerase n=14 Tax=Bacteria Re... 424 e-117 UniRef50_C6BW91 DNA-directed DNA polymerase n=4 Tax=Bacteria Rep... 424 e-117 UniRef50_C0VGI8 Nucleotidyltransferase/DNA polymerase n=4 Tax=Ac... 423 e-117 UniRef50_C6BX75 DNA-directed DNA polymerase n=1 Tax=Desulfovibri... 423 e-117 UniRef50_B2A8L2 DNA-directed DNA polymerase n=1 Tax=Natranaerobi... 423 e-117 UniRef50_B4WV07 ImpB/MucB/SamB family n=6 Tax=Synechococcus sp. ... 422 e-116 UniRef50_A0LG84 DNA-directed DNA polymerase n=4 Tax=Deltaproteob... 422 e-116 UniRef50_Q818U9 DNA polymerase IV n=137 Tax=Bacillaceae RepID=DP... 420 e-116 UniRef50_Q4FMY4 UmuC n=6 Tax=Bacteria RepID=Q4FMY4_PELUB 418 e-115 UniRef50_C6PAP1 DNA-directed DNA polymerase n=1 Tax=Thermoanaero... 417 e-115 UniRef50_C7I5S1 DNA-directed DNA polymerase n=2 Tax=Proteobacter... 417 e-115 UniRef50_Q15TC7 DNA-directed DNA polymerase n=25 Tax=Proteobacte... 417 e-115 UniRef50_A8ZS21 DNA-directed DNA polymerase n=1 Tax=Desulfococcu... 416 e-115 UniRef50_A8ZLK7 DNA polymerase V, putative n=4 Tax=Cyanobacteria... 416 e-115 UniRef50_A5Y0S5 UmuC-like protein n=9 Tax=Proteobacteria RepID=A... 414 e-114 UniRef50_C9KLE5 DNA polymerase IV n=2 Tax=Veillonellaceae RepID=... 414 e-114 UniRef50_B8CWI6 DNA-directed DNA polymerase n=1 Tax=Halothermoth... 414 e-114 UniRef50_D0J481 DNA-directed DNA polymerase n=4 Tax=cellular org... 414 e-114 UniRef50_D1C0B2 DNA-directed DNA polymerase n=2 Tax=Actinomyceta... 413 e-114 UniRef50_A6CAV0 DNA-damage-inducible protein P n=2 Tax=Planctomy... 412 e-113 UniRef50_A5CQW8 DNA polymerase IV n=18 Tax=Actinobacteria (class... 412 e-113 UniRef50_D0Z2K2 Error-prone repair protein UmuC n=5 Tax=Photobac... 412 e-113 UniRef50_Q30X29 DNA-directed DNA polymerase n=8 Tax=Proteobacter... 412 e-113 UniRef50_A4ECH9 Putative uncharacterized protein n=1 Tax=Collins... 412 e-113 UniRef50_A9W7Y3 DNA-directed DNA polymerase n=10 Tax=Rhizobiales... 412 e-113 UniRef50_C0YV48 Probable RumB/ImpB like DNA repair protein n=1 T... 410 e-113 UniRef50_P58965 DNA polymerase IV n=29 Tax=Clostridia RepID=DPO4... 410 e-113 UniRef50_D1R5W7 Putative uncharacterized protein n=1 Tax=Parachl... 409 e-113 UniRef50_B9Z6P1 DNA-directed DNA polymerase n=2 Tax=Proteobacter... 409 e-112 UniRef50_D0KZ56 DNA-directed DNA polymerase n=12 Tax=root RepID=... 409 e-112 UniRef50_A5GPY7 Bacterial UmuC protein homolog (SOS-regulated pr... 409 e-112 UniRef50_C6XEM8 DNA-directed DNA polymerase n=1 Tax=Methylovorus... 409 e-112 UniRef50_C7LWM3 DNA-directed DNA polymerase n=1 Tax=Desulfomicro... 408 e-112 UniRef50_C9LED2 UmuC protein n=1 Tax=Prevotella tannerae ATCC 51... 408 e-112 UniRef50_B2FJL0 Putative UV protection and mutation protein n=1 ... 407 e-112 UniRef50_A5D243 DNA polymerase IV n=4 Tax=Clostridia RepID=DPO4_... 406 e-112 UniRef50_C0WCT4 DNA-directed DNA polymerase n=1 Tax=Acidaminococ... 406 e-112 UniRef50_A5FU54 UMUC domain protein DNA-repair protein n=2 Tax=A... 405 e-111 UniRef50_C0ZFX0 DNA polymerase IV n=6 Tax=Bacillales RepID=C0ZFX... 405 e-111 UniRef50_UPI0000E87FBE DNA repair protein n=1 Tax=Methylophilale... 405 e-111 UniRef50_Q3AKE9 DNA-directed DNA polymerase n=7 Tax=Bacteria Rep... 405 e-111 UniRef50_D0RPK3 Protein UmuC n=1 Tax=alpha proteobacterium HIMB1... 404 e-111 UniRef50_Q67QM6 DNA polymerase IV n=1 Tax=Symbiobacterium thermo... 403 e-111 UniRef50_Q7USY7 DNA polymerase IV n=1 Tax=Rhodopirellula baltica... 402 e-111 UniRef50_B3E0C4 Nucleotidyltransferase/DNA polymerase UmuC n=1 T... 402 e-110 UniRef50_C6NU08 Error-prone repair protein UmuC n=1 Tax=Acidithi... 401 e-110 UniRef50_P54560 DNA polymerase IV 2 n=8 Tax=Bacillales RepID=DPO... 401 e-110 UniRef50_D1PC12 UmuC protein n=2 Tax=Bacteria RepID=D1PC12_9BACT 400 e-110 UniRef50_Q0ACU7 DNA-directed DNA polymerase n=3 Tax=Nitrosomonas... 400 e-110 UniRef50_B8DRU5 DNA-directed DNA polymerase n=13 Tax=Proteobacte... 400 e-110 UniRef50_C9LNT4 ATP-NAD kinase n=1 Tax=Dialister invisus DSM 154... 399 e-110 UniRef50_B8DIF6 DNA-directed DNA polymerase n=6 Tax=Desulfovibri... 399 e-109 UniRef50_A4CII2 DNA polymerase IV n=20 Tax=cellular organisms Re... 399 e-109 UniRef50_Q1IRF1 DNA-directed DNA polymerase n=2 Tax=Acidobacteri... 399 e-109 UniRef50_B9JZV6 DNA-damage-inducible protein n=17 Tax=Bacteria R... 399 e-109 UniRef50_B5EN92 DNA-directed DNA polymerase n=2 Tax=Acidithiobac... 398 e-109 UniRef50_Q1QXW8 DNA-directed DNA polymerase n=1 Tax=Chromohaloba... 397 e-109 UniRef50_Q2YI99 Nucleotidyltransferase/DNA polymerase n=3 Tax=Ba... 396 e-109 UniRef50_Q2KZS3 DNA polymerase IV n=2 Tax=Proteobacteria RepID=Q... 394 e-108 UniRef50_C0QJE1 DinP n=1 Tax=Desulfobacterium autotrophicum HRM2... 394 e-108 UniRef50_D0WQX0 DNA polymerase IV n=1 Tax=Actinomyces sp. oral t... 394 e-108 UniRef50_B2GJQ9 DNA polymerase IV n=1 Tax=Kocuria rhizophila DC2... 393 e-108 UniRef50_C6VYA9 DNA-directed DNA polymerase n=15 Tax=Bacteroidet... 393 e-108 UniRef50_B0PEH3 Putative uncharacterized protein n=2 Tax=Clostri... 393 e-108 UniRef50_Q19NE6 UV protection and repair protein n=9 Tax=Enterob... 392 e-107 UniRef50_B6BWB3 DNA-directed DNA polymerase n=1 Tax=beta proteob... 392 e-107 UniRef50_A6GF38 DNA-directed DNA polymerase n=1 Tax=Plesiocystis... 391 e-107 UniRef50_C6WDG0 DNA-directed DNA polymerase n=8 Tax=Actinomyceta... 391 e-107 UniRef50_A6EED8 Nucleotidyltransferase/DNA polymerase involved i... 391 e-107 UniRef50_C5D272 DNA-directed DNA polymerase n=5 Tax=Geobacillus ... 390 e-107 UniRef50_C5BW73 DNA-directed DNA polymerase n=4 Tax=Actinomyceta... 390 e-107 UniRef50_Q31B23 DNA-directed DNA polymerase n=7 Tax=Prochlorococ... 390 e-107 UniRef50_A6WU94 DNA-directed DNA polymerase n=28 Tax=Gammaproteo... 389 e-107 UniRef50_C8WRW0 DNA-directed DNA polymerase n=2 Tax=Alicyclobaci... 389 e-106 UniRef50_C7NIB1 Nucleotidyltransferase/DNA polymerase involved i... 388 e-106 UniRef50_D1VXB9 Putative DNA polymerase V subunit UmuC n=1 Tax=P... 388 e-106 UniRef50_D1PR84 DNA-directed DNA polymerase n=1 Tax=Subdoligranu... 388 e-106 UniRef50_A1WY69 DNA polymerase IV n=47 Tax=Bacteria RepID=DPO4_H... 388 e-106 UniRef50_Q3B3L9 DNA-directed DNA polymerase n=2 Tax=Chlorobium/P... 388 e-106 UniRef50_B8G1R4 DNA-directed DNA polymerase n=2 Tax=Desulfitobac... 387 e-106 UniRef50_C9LBG3 DNA polymerase IV n=6 Tax=Clostridiales RepID=C9... 387 e-106 UniRef50_Q2P505 Polymerase V subunit n=4 Tax=Xanthomonadaceae Re... 387 e-106 UniRef50_C7R3I3 DNA-directed DNA polymerase n=1 Tax=Jonesia deni... 387 e-106 UniRef50_A3DH61 DNA polymerase IV n=9 Tax=Clostridiales RepID=DP... 387 e-106 UniRef50_C8NE97 DNA-directed DNA polymerase n=2 Tax=Granulicatel... 386 e-106 UniRef50_C7H2N6 DNA polymerase IV n=8 Tax=Bacteria RepID=C7H2N6_... 386 e-106 UniRef50_Q18A91 DNA polymerase IV n=46 Tax=Bacteria RepID=DPO4_C... 386 e-106 UniRef50_A0K1P6 DNA-directed DNA polymerase n=7 Tax=Bacteria Rep... 386 e-106 UniRef50_Q2RYM0 UmuC protein n=2 Tax=Salinibacter ruber DSM 1385... 386 e-106 UniRef50_C6NY09 DNA polymerase IV n=2 Tax=Bacteria RepID=C6NY09_... 386 e-105 UniRef50_A6DHJ1 Putative uncharacterized protein n=1 Tax=Lentisp... 385 e-105 UniRef50_C4G590 Putative uncharacterized protein n=3 Tax=Firmicu... 385 e-105 UniRef50_A9KNH1 DNA-directed DNA polymerase n=4 Tax=Clostridiale... 384 e-105 UniRef50_B9MMT7 DNA-directed DNA polymerase n=2 Tax=Clostridia R... 384 e-105 UniRef50_C9RDA6 DNA-directed DNA polymerase n=1 Tax=Ammonifex de... 384 e-105 UniRef50_C0FVJ8 Putative uncharacterized protein n=1 Tax=Rosebur... 383 e-105 UniRef50_C8WAH8 DNA-directed DNA polymerase n=3 Tax=Coriobacteri... 383 e-105 UniRef50_C4L3M4 DNA-directed DNA polymerase n=1 Tax=Exiguobacter... 383 e-105 UniRef50_A5N2U5 DNA polymerase IV n=5 Tax=Clostridiaceae RepID=D... 383 e-105 UniRef50_B3T119 Putative impB/mucB/samB family protein n=1 Tax=u... 381 e-104 UniRef50_Q8UJK7 DNA polymerase IV 2 n=3 Tax=Bacteria RepID=DPO42... 380 e-104 UniRef50_Q31HB8 ImpB/mucB/samB family protein n=1 Tax=Thiomicros... 380 e-104 UniRef50_B1CA62 Putative uncharacterized protein n=1 Tax=Anaerof... 379 e-104 UniRef50_B4WH69 ImpB/MucB/SamB family n=1 Tax=Synechococcus sp. ... 379 e-103 UniRef50_Q2FKS4 DNA-directed DNA polymerase n=1 Tax=Methanospiri... 379 e-103 UniRef50_C1A1E2 DNA polymerase IV n=28 Tax=Actinobacteria (class... 379 e-103 UniRef50_Q97MB3 DNA polymerase IV n=1 Tax=Clostridium acetobutyl... 379 e-103 UniRef50_A7REV5 Predicted protein (Fragment) n=1 Tax=Nematostell... 379 e-103 UniRef50_C0D1Q6 Putative uncharacterized protein n=2 Tax=Clostri... 379 e-103 UniRef50_A0M5X6 DNA polymerase IV n=19 Tax=Bacteroidetes RepID=A... 378 e-103 UniRef50_Q0AWD6 DNA-directed DNA polymerase n=7 Tax=Bacteria Rep... 378 e-103 UniRef50_C7MN57 Nucleotidyltransferase/DNA polymerase involved i... 378 e-103 UniRef50_A5FSS1 DNA polymerase IV n=5 Tax=Dehalococcoides RepID=... 378 e-103 UniRef50_B2I3H3 Nucleotidyltransferase/DNA polymerase n=12 Tax=A... 377 e-103 UniRef50_Q73P36 DNA polymerase IV n=2 Tax=Treponema RepID=DPO4_T... 377 e-103 UniRef50_Q4L7K8 DNA polymerase IV n=65 Tax=Staphylococcaceae Rep... 377 e-103 UniRef50_UPI000050FCD1 DNA-directed DNA polymerase n=1 Tax=Brevi... 377 e-103 UniRef50_B0TAW2 DNA polymerase iv n=1 Tax=Heliobacterium modesti... 377 e-103 UniRef50_C6XT23 DNA-directed DNA polymerase n=1 Tax=Pedobacter h... 377 e-103 UniRef50_A3CSG3 DNA polymerase IV n=4 Tax=Methanomicrobia RepID=... 376 e-103 UniRef50_C2BWE4 DNA-directed DNA polymerase n=1 Tax=Mobiluncus c... 376 e-103 UniRef50_D1VVF6 DNA polymerase IV n=1 Tax=Peptoniphilus lacrimal... 376 e-102 UniRef50_D1PGW5 DNA-directed DNA polymerase n=1 Tax=Prevotella c... 375 e-102 UniRef50_A6NU31 Putative uncharacterized protein n=4 Tax=Bacteri... 375 e-102 UniRef50_Q1QAG3 DNA-directed DNA polymerase n=2 Tax=Psychrobacte... 375 e-102 UniRef50_A3M2E2 DNA-directed DNA polymerase n=8 Tax=Acinetobacte... 375 e-102 UniRef50_Q2IM85 DNA-directed DNA polymerase n=7 Tax=Myxococcales... 375 e-102 UniRef50_C0LIJ7 Putative DNA polymerase V subunit UmuC n=1 Tax=A... 374 e-102 UniRef50_C8P3H3 DNA polymerase IV (Pol IV) n=1 Tax=Erysipelothri... 374 e-102 UniRef50_D0LIK9 DNA-directed DNA polymerase n=1 Tax=Haliangium o... 374 e-102 UniRef50_Q2P7M9 DNA polymerase IV n=22 Tax=Proteobacteria RepID=... 373 e-102 UniRef50_Q2S2C0 Putative DNA polymerase IV n=2 Tax=Bacteria RepI... 372 e-101 UniRef50_B7AQS7 Putative uncharacterized protein n=1 Tax=Bactero... 372 e-101 UniRef50_C4F8L3 Putative uncharacterized protein n=2 Tax=Collins... 372 e-101 UniRef50_A0L3I2 DNA-directed DNA polymerase n=1 Tax=Shewanella s... 372 e-101 UniRef50_C6W6Q9 DNA-directed DNA polymerase n=3 Tax=Bacteroidete... 371 e-101 UniRef50_B6WBQ9 Putative uncharacterized protein n=1 Tax=Anaeroc... 370 e-101 UniRef50_D2NU69 Nucleotidyltransferase/DNA polymerase involved i... 369 e-100 UniRef50_A9KLV9 DNA-directed DNA polymerase n=8 Tax=Clostridiale... 369 e-100 UniRef50_D2MQ51 Putative DNA polymerase IV n=1 Tax=Bulleidia ext... 369 e-100 UniRef50_A1KUQ3 DNA polymerase IV n=34 Tax=Proteobacteria RepID=... 369 e-100 UniRef50_C7RFL5 DNA-directed DNA polymerase n=3 Tax=Anaerococcus... 369 e-100 UniRef50_B1YK83 DNA polymerase IV n=1 Tax=Exiguobacterium sibiri... 369 e-100 UniRef50_A8RBK8 Putative uncharacterized protein n=2 Tax=unclass... 368 e-100 UniRef50_B9YCM9 Putative uncharacterized protein n=1 Tax=Holdema... 368 e-100 UniRef50_Q8UFV3 DNA polymerase IV 1 n=118 Tax=Alphaproteobacteri... 367 e-100 UniRef50_C1F962 Putative DNA polymerase IV n=2 Tax=Bacteria RepI... 367 e-100 UniRef50_Q8VMP6 RuvB protein n=4 Tax=Pseudomonas RepID=Q8VMP6_PSEPU 366 e-100 UniRef50_Q6AL48 DNA polymerase IV n=1 Tax=Desulfotalea psychroph... 366 e-99 UniRef50_B0VP90 DNA polymerase IV, devoid of proofreading, damag... 365 2e-99 UniRef50_C7QBJ0 DNA-directed DNA polymerase n=3 Tax=Actinomyceta... 364 3e-99 UniRef50_B9JVH1 DNA-damage inducible protein n=18 Tax=Alphaprote... 364 3e-99 UniRef50_A8RF31 Putative uncharacterized protein n=1 Tax=Eubacte... 364 4e-99 UniRef50_Q04M21 DNA polymerase IV n=98 Tax=Bacilli RepID=DPO4_STRP2 364 4e-99 UniRef50_UPI0001982DE6 PREDICTED: hypothetical protein n=1 Tax=V... 364 5e-99 UniRef50_B0MAH2 Putative uncharacterized protein n=1 Tax=Anaeros... 364 5e-99 UniRef50_B9YDA2 Putative uncharacterized protein n=1 Tax=Holdema... 363 6e-99 UniRef50_C5CA41 DNA polymerase IV involved in DNA repair n=3 Tax... 363 8e-99 UniRef50_Q72MY7 DNA polymerase IV n=18 Tax=Bacteria RepID=DPO4_L... 363 8e-99 UniRef50_B0BPX9 DNA polymerase IV n=222 Tax=cellular organisms R... 363 9e-99 UniRef50_D1C5S0 DNA-directed DNA polymerase n=1 Tax=Sphaerobacte... 361 2e-98 UniRef50_C7H0B0 Putative DNA polymerase IV n=1 Tax=Eubacterium s... 361 2e-98 UniRef50_A7I5X9 DNA-directed DNA polymerase n=1 Tax=Candidatus M... 360 4e-98 UniRef50_Q9AK82 DNA polymerase IV n=34 Tax=Bacteria RepID=DPO4_S... 360 4e-98 UniRef50_Q0KKM4 Putative UV protection protein n=1 Tax=Plasmid p... 360 5e-98 UniRef50_C4GAM5 Putative uncharacterized protein n=1 Tax=Shuttle... 360 6e-98 UniRef50_C2FXW7 Possible DNA-directed DNA polymerase n=2 Tax=Sph... 360 8e-98 UniRef50_A3VP13 DNA polymerase IV n=5 Tax=Alphaproteobacteria Re... 359 8e-98 UniRef50_Q4ZWM4 DNA polymerase IV n=61 Tax=Bacteria RepID=DPO4_P... 359 9e-98 UniRef50_C8WGA6 DNA-directed DNA polymerase n=3 Tax=Bacteria Rep... 359 1e-97 UniRef50_C7RGQ0 DNA-directed DNA polymerase n=5 Tax=Anaerococcus... 358 2e-97 UniRef50_Q654Y6 Os06g0691000 protein n=7 Tax=Poaceae RepID=Q654Y... 357 4e-97 UniRef50_Q0EYF1 Putative uncharacterized protein n=1 Tax=Maripro... 357 5e-97 UniRef50_A9NFA5 DNA-damage repair protein n=5 Tax=Bacteria RepID... 357 6e-97 UniRef50_Q2LU75 DNA polymerase IV n=1 Tax=Syntrophus aciditrophi... 357 7e-97 UniRef50_B1KD33 DNA polymerase IV n=55 Tax=Proteobacteria RepID=... 356 1e-96 UniRef50_Q6MCK0 Putative SOS mutagenesis and repair protein UmuC... 355 1e-96 UniRef50_B9HS71 Predicted protein n=1 Tax=Populus trichocarpa Re... 355 2e-96 UniRef50_Q38YP4 DNA-damage-inducible protein P n=30 Tax=Bacilli ... 355 2e-96 UniRef50_A1A051 DNA-damage-inducible protein P n=10 Tax=Bifidoba... 355 2e-96 UniRef50_C8NZM9 DNA polymerase IV n=1 Tax=Erysipelothrix rhusiop... 355 2e-96 UniRef50_A8YTI5 DNA-damage-inducible protein n=29 Tax=Lactobacil... 355 2e-96 UniRef50_A5G2F2 DNA-directed DNA polymerase n=1 Tax=Acidiphilium... 355 2e-96 UniRef50_C9M6E1 UmuC protein n=1 Tax=Jonquetella anthropi E3_33 ... 355 2e-96 UniRef50_C5NXH9 DNA polymerase IV 1 n=1 Tax=Gemella haemolysans ... 354 3e-96 UniRef50_A8UAY3 ImpB/MucB/SamB family protein n=5 Tax=Bacilli Re... 353 6e-96 UniRef50_D1BPW6 UMUC domain protein DNA-repair protein n=2 Tax=V... 353 7e-96 UniRef50_Q0FEJ5 DNA polymerase IV n=3 Tax=Rhodobacterales RepID=... 353 9e-96 UniRef50_C4FTM8 Putative uncharacterized protein n=1 Tax=Catonel... 353 9e-96 UniRef50_B7S1R7 ImpB/MucB/SamB family protein n=1 Tax=marine gam... 353 1e-95 UniRef50_Q2RNH1 DNA-directed DNA polymerase n=5 Tax=Alphaproteob... 352 1e-95 UniRef50_Q5WYY8 DNA polymerase IV n=64 Tax=Bacteria RepID=DPO4_L... 352 2e-95 UniRef50_B7GNF3 Transcriptional regulator, Fis family n=9 Tax=Bi... 351 3e-95 UniRef50_D2R9L6 ImpB/MucB/SamB family protein n=1 Tax=Gardnerell... 351 4e-95 UniRef50_A4BJD8 DNA polymerase IV n=1 Tax=Reinekea blandensis ME... 351 4e-95 UniRef50_C3Y6K1 Putative uncharacterized protein (Fragment) n=1 ... 350 4e-95 UniRef50_B1VHB3 DNA polymerase IV n=1 Tax=Corynebacterium urealy... 350 5e-95 UniRef50_A5Z8E0 Putative uncharacterized protein n=10 Tax=Clostr... 350 5e-95 UniRef50_B1YIX5 DNA-directed DNA polymerase n=2 Tax=Exiguobacter... 350 5e-95 UniRef50_Q98JM5 DNA polymerase IV 2 n=4 Tax=Bacteria RepID=DPO42... 350 6e-95 UniRef50_B9XRF0 DNA polymerase III, alpha subunit n=1 Tax=bacter... 350 6e-95 UniRef50_B0TQD1 DNA polymerase IV n=7 Tax=Bacteria RepID=DPO4_SHEHH 350 7e-95 UniRef50_UPI0001C34BBE DNA-directed DNA polymerase n=3 Tax=Neiss... 349 1e-94 UniRef50_C2HDM1 Possible DNA-directed DNA polymerase n=83 Tax=Fi... 348 1e-94 UniRef50_A3EWL3 Polymerase ATREV1-1105 n=8 Tax=rosids RepID=A3EW... 348 2e-94 UniRef50_C0ZB00 DNA polymerase IV n=1 Tax=Brevibacillus brevis N... 348 2e-94 UniRef50_D1JEL0 DNA polymerase IV n=1 Tax=uncultured archaeon Re... 348 3e-94 UniRef50_Q2LSC9 Nucleotidyltransferase/DNA polymerase protein n=... 347 4e-94 UniRef50_Q2L7B2 REV1 n=7 Tax=Sordariomycetes RepID=Q2L7B2_NEUCR 347 4e-94 UniRef50_D2A3T9 Putative uncharacterized protein GLEAN_14950 n=1... 347 6e-94 UniRef50_B5JKI6 ImpB/MucB/SamB family n=1 Tax=Verrucomicrobiae b... 346 9e-94 UniRef50_C5JS23 DNA damage repair protein Mus42 n=2 Tax=Ajellomy... 346 1e-93 UniRef50_C2KZY4 DNA polymerase IV n=2 Tax=Clostridiales RepID=C2... 346 1e-93 UniRef50_C8V695 Deoxycytidyl transferase (Eurofung) n=2 Tax=Emer... 345 2e-93 UniRef50_B0S0R3 DNA polymerase IV n=4 Tax=Clostridiales RepID=B0... 345 2e-93 UniRef50_B1ZN03 DNA polymerase IV n=2 Tax=Opitutaceae RepID=DPO4... 344 3e-93 UniRef50_Q03X78 Nucleotidyltransferase/DNA polymerase for DNA re... 344 3e-93 UniRef50_Q2SS65 ImpB/MucB/SamB family protein n=3 Tax=Mycoplasma... 344 4e-93 UniRef50_C5RD20 DNA-directed DNA polymerase n=1 Tax=Weissella pa... 344 4e-93 UniRef50_B5Y6A2 DNA-directed DNA polymerase n=1 Tax=Coprothermob... 344 4e-93 UniRef50_B5TTR9 RumB n=6 Tax=Bacteria RepID=B5TTR9_9BACT 344 4e-93 UniRef50_A7HFE4 DNA-directed DNA polymerase n=1 Tax=Anaeromyxoba... 343 5e-93 UniRef50_B0TZS5 DNA polymerase IV n=14 Tax=Francisella RepID=DPO... 343 5e-93 UniRef50_D1YPB9 Putative DNA polymerase IV n=1 Tax=Veillonella p... 343 6e-93 UniRef50_C3PHE2 DNA polymerase IV n=10 Tax=Corynebacterineae Rep... 343 8e-93 UniRef50_D0NDK9 DNA repair protein REV1 n=1 Tax=Phytophthora inf... 343 9e-93 UniRef50_D2P394 DNA polymerase V n=7 Tax=Listeria RepID=D2P394_L... 342 2e-92 UniRef50_A2QTI4 Contig An09c0050, complete genome n=9 Tax=Euroti... 342 2e-92 UniRef50_UPI00016E76F4 UPI00016E76F4 related cluster n=1 Tax=Tak... 342 2e-92 UniRef50_B3WC63 DNA-damage-inducible protein P n=8 Tax=Lactobaci... 341 3e-92 UniRef50_C0S277 DNA polymerase IV n=5 Tax=Onygenales RepID=C0S27... 341 3e-92 UniRef50_UPI000180C22E PREDICTED: similar to polymerase (DNA dir... 341 3e-92 UniRef50_B8GPZ5 DNA-directed DNA polymerase n=2 Tax=Gammaproteob... 341 4e-92 UniRef50_B3E013 Nucleotidyltransferase/DNA polymerase involved i... 339 1e-91 UniRef50_C1A9Y5 DNA polymerase IV n=1 Tax=Gemmatimonas aurantiac... 338 2e-91 UniRef50_A0YE03 DNA polymerase IV n=2 Tax=Gammaproteobacteria Re... 338 2e-91 UniRef50_A4VCZ3 DNA polymerase IV / kappa n=1 Tax=Tetrahymena th... 338 2e-91 UniRef50_D2LRT2 DNA-directed DNA polymerase n=3 Tax=Bacillus Rep... 338 2e-91 UniRef50_B6J224 DNA polymerase IV n=5 Tax=Coxiella burnetii RepI... 338 2e-91 UniRef50_Q3II35 DNA polymerase IV n=3 Tax=Alteromonadales RepID=... 338 3e-91 UniRef50_Q6F1D8 DNA polymerase IV (PolIV) n=1 Tax=Mesoplasma flo... 337 4e-91 UniRef50_Q46L62 DNA-directed DNA polymerase n=2 Tax=Prochlorococ... 337 5e-91 UniRef50_B2A4V8 DNA-directed DNA polymerase n=5 Tax=Clostridia R... 337 5e-91 UniRef50_B2VS10 DNA polymerase IV n=3 Tax=Pleosporineae RepID=B2... 337 7e-91 UniRef50_B9X9L4 DNA-directed DNA polymerase n=3 Tax=Verrucomicro... 337 7e-91 UniRef50_Q8TIW3 DNA polymerase IV n=4 Tax=Methanosarcinaceae Rep... 336 1e-90 UniRef50_Q1N612 DNA polymerase IV n=1 Tax=Bermanella marisrubri ... 335 2e-90 UniRef50_A6UXE7 Ultraviolet light resistance protein B n=1 Tax=P... 335 2e-90 UniRef50_Q9UBZ9 DNA repair protein REV1 n=27 Tax=Tetrapoda RepID... 335 3e-90 UniRef50_Q2HFL9 Putative uncharacterized protein n=1 Tax=Chaetom... 334 3e-90 UniRef50_A3NBC4 DNA polymerase IV n=15 Tax=pseudomallei group Re... 334 4e-90 UniRef50_B6K5W3 DNA polymerase kappa n=2 Tax=cellular organisms ... 333 5e-90 UniRef50_B1MZW7 Nucleotidyltransferase/DNA polymerase involved i... 333 7e-90 UniRef50_B8M4C5 DNA-directed polymerase kappa, putative n=14 Tax... 332 1e-89 UniRef50_C4G2M8 Putative uncharacterized protein n=1 Tax=Abiotro... 332 1e-89 UniRef50_Q7NAR2 UmuC/DinP-like n=1 Tax=Mycoplasma gallisepticum ... 332 2e-89 UniRef50_Q29DW0 GA11465 n=3 Tax=Drosophila RepID=Q29DW0_DROPS 331 3e-89 UniRef50_UPI000186DDA3 terminal deoxycytidyl transferase rev1, p... 331 3e-89 UniRef50_A7E7M1 Putative uncharacterized protein n=2 Tax=Sclerot... 331 4e-89 UniRef50_UPI0001C32444 DNA-directed DNA polymerase n=1 Tax=Conex... 330 4e-89 UniRef50_C9AAQ9 DNA directed DNA polymerase n=4 Tax=Enterococcus... 330 4e-89 UniRef50_D1HMR5 Whole genome shotgun sequence of line PN40024, s... 330 5e-89 UniRef50_D1Y4D1 DNA polymerase IV n=1 Tax=Pyramidobacter piscole... 330 6e-89 UniRef50_B2AY86 Predicted CDS Pa_1_10240 n=3 Tax=Sordariomycetes... 330 7e-89 UniRef50_Q47E66 UMUC-like DNA-repair protein n=2 Tax=Betaproteob... 328 2e-88 UniRef50_D1BHR1 Nucleotidyltransferase/DNA polymerase involved i... 328 2e-88 UniRef50_D1WCN2 Nucleotidyltransferase/DNA polymerase for DNA re... 328 2e-88 UniRef50_C5BNY2 DNA polymerase IV n=1 Tax=Teredinibacter turnera... 328 2e-88 UniRef50_C1I721 DNA-damage repair protein n=1 Tax=Clostridium sp... 328 3e-88 UniRef50_Q041Q9 Nucleotidyltransferase/DNA polymerase for DNA re... 328 3e-88 UniRef50_B6Q7Y5 DNA-directed polymerase kappa, putative n=2 Tax=... 328 3e-88 UniRef50_A0D236 Chromosome undetermined scaffold_35, whole genom... 327 4e-88 UniRef50_A6DIV6 DNA polymerase IV n=1 Tax=Lentisphaera araneosa ... 327 6e-88 UniRef50_C7MBE5 Nucleotidyltransferase/DNA polymerase involved i... 326 1e-87 UniRef50_Q7Q6B2 AGAP005939-PA n=2 Tax=Culicidae RepID=Q7Q6B2_ANOGA 325 1e-87 UniRef50_D2VFM3 Predicted protein n=1 Tax=Naegleria gruberi RepI... 325 1e-87 UniRef50_B4MLB6 GK17515 n=1 Tax=Drosophila willistoni RepID=B4ML... 325 2e-87 UniRef50_A0AM11 Complete genome n=24 Tax=Listeria RepID=A0AM11_L... 325 2e-87 UniRef50_A5IXL3 DNA damage repair protein MucB n=1 Tax=Mycoplasm... 325 2e-87 UniRef50_B7QCT1 Terminal deoxycytidyl transferase rev1, putative... 325 2e-87 UniRef50_A9UNE7 GH11153p (Fragment) n=8 Tax=Drosophila RepID=A9U... 324 4e-87 UniRef50_C5CJ42 DNA-directed DNA polymerase n=1 Tax=Kosmotoga ol... 324 4e-87 UniRef50_C4LI62 DNA polymerase IV n=1 Tax=Corynebacterium kroppe... 323 6e-87 UniRef50_B7CAT7 Putative uncharacterized protein n=2 Tax=Erysipe... 322 1e-86 UniRef50_B6Q3Z2 DNA damage repair protein Mus42, putative n=5 Ta... 322 2e-86 UniRef50_A9BNM1 DNA-directed DNA polymerase n=34 Tax=Betaproteob... 322 2e-86 UniRef50_A4QFK8 DNA polymerase IV n=28 Tax=Actinomycetales RepID... 322 2e-86 UniRef50_B0R4P0 DNA polymerase IV n=7 Tax=Halobacteriaceae RepID... 321 4e-86 UniRef50_C1F7T1 ImpB/MucB/SamB family protein n=1 Tax=Acidobacte... 321 4e-86 UniRef50_A8VWB3 DNA-directed DNA polymerase n=1 Tax=Bacillus sel... 320 5e-86 UniRef50_B9LT67 UMUC domain protein DNA-repair protein n=3 Tax=H... 320 5e-86 UniRef50_C6WX69 DNA-directed DNA polymerase n=1 Tax=Methylotener... 320 8e-86 UniRef50_C3WGR0 DNA polymerase IV n=6 Tax=Fusobacterium RepID=C3... 319 1e-85 UniRef50_A4RF27 Putative uncharacterized protein n=1 Tax=Magnapo... 318 2e-85 UniRef50_B0D2Y9 Predicted protein n=3 Tax=Agaricales RepID=B0D2Y... 318 3e-85 UniRef50_A0QHM7 DNA polymerase IV 1 n=8 Tax=Corynebacterineae Re... 317 4e-85 UniRef50_C4FT17 Putative uncharacterized protein n=3 Tax=Firmicu... 317 4e-85 UniRef50_A1SN18 DNA-directed DNA polymerase n=13 Tax=Actinomycet... 317 5e-85 UniRef50_O74944 DNA polymerase kappa n=1 Tax=Schizosaccharomyces... 317 5e-85 UniRef50_A9V4K7 Predicted protein n=1 Tax=Monosiga brevicollis R... 317 6e-85 UniRef50_Q4KWZ7 REV1 protein n=9 Tax=Euteleostomi RepID=Q4KWZ7_C... 317 7e-85 UniRef50_A6C5Y5 UMUC-like DNA-repair protein n=1 Tax=Planctomyce... 316 9e-85 UniRef50_C8W7V4 UMUC domain protein DNA-repair protein n=12 Tax=... 315 2e-84 UniRef50_Q5K8U2 Putative uncharacterized protein n=3 Tax=Agarico... 315 2e-84 UniRef50_Q03AC9 Nucleotidyltransferase/DNA polymerase for DNA re... 315 2e-84 UniRef50_C1XFZ1 Nucleotidyltransferase/DNA polymerase involved i... 314 4e-84 UniRef50_A2DLM9 ImpB/MucB/SamB family protein n=1 Tax=Trichomona... 313 6e-84 UniRef50_Q5Q9H0 Polymerase kappa isoform 9 n=3 Tax=Murinae RepID... 313 1e-83 UniRef50_P63988 DNA polymerase IV 2 n=20 Tax=Corynebacterineae R... 312 1e-83 UniRef50_A8Z6F4 Umuc domain protein dna-repair protein n=2 Tax=C... 312 2e-83 UniRef50_A9NFG9 DNA polymerase IV n=1 Tax=Acholeplasma laidlawii... 312 2e-83 UniRef50_Q03R40 Nucleotidyltransferase/DNA polymerase for DNA re... 312 2e-83 UniRef50_A4RZX2 Predicted protein (Fragment) n=2 Tax=Ostreococcu... 312 2e-83 UniRef50_D1BPP8 UMUC domain protein DNA-repair protein n=3 Tax=V... 312 2e-83 UniRef50_C8WYD4 DNA-directed DNA polymerase n=4 Tax=Alicyclobaci... 312 2e-83 UniRef50_UPI0000D862D7 hypothetical protein CIMG_01093 n=1 Tax=C... 311 4e-83 UniRef50_C3AWZ9 DNA-damage repair protein n=3 Tax=Bacillus cereu... 310 6e-83 UniRef50_UPI0001B7B957 DinB1 protein n=3 Tax=Euteleostomi RepID=... 310 7e-83 UniRef50_C7N9E0 DNA-directed DNA polymerase n=5 Tax=Fusobacteria... 310 7e-83 UniRef50_D2R017 DNA-directed DNA polymerase n=2 Tax=Planctomycet... 310 8e-83 UniRef50_A9A3A9 DNA polymerase IV n=6 Tax=Thaumarchaeota RepID=D... 309 1e-82 UniRef50_C4XEA8 Putative uncharacterized protein n=1 Tax=Mycopla... 309 1e-82 UniRef50_C1XR91 Nucleotidyltransferase/DNA polymerase involved i... 309 1e-82 UniRef50_O94623 DNA repair protein rev1 n=1 Tax=Schizosaccharomy... 309 1e-82 UniRef50_B5BUV5 DNA polymerase kappa n=2 Tax=Agaricales RepID=B5... 308 2e-82 UniRef50_Q4P422 Putative uncharacterized protein n=1 Tax=Ustilag... 308 2e-82 UniRef50_UPI0000F2F527 DNA-directed DNA polymerase n=1 Tax=Acine... 308 3e-82 UniRef50_B7P2Q3 DNA polymerase IV / kappa, putative n=1 Tax=Ixod... 307 5e-82 UniRef50_A4S3F0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 307 5e-82 UniRef50_Q8REB0 DNA polymerase IV n=8 Tax=Fusobacterium RepID=DP... 306 7e-82 UniRef50_A8PXZ2 Putative uncharacterized protein n=1 Tax=Malasse... 305 2e-81 UniRef50_Q4S0P1 Chromosome 2 SCAF14781, whole genome shotgun seq... 305 2e-81 UniRef50_A3GH67 DNA repair protein n=2 Tax=Pichia stipitis RepID... 304 4e-81 UniRef50_B1AJ79 DNA polymerase IV n=15 Tax=Ureaplasma RepID=DPO4... 303 5e-81 UniRef50_C5MCF2 Putative uncharacterized protein n=1 Tax=Candida... 303 7e-81 UniRef50_C4Z6F8 DNA polymerase V n=1 Tax=Eubacterium eligens ATC... 303 1e-80 UniRef50_B6HNR2 Pc21g13870 protein n=17 Tax=Leotiomyceta RepID=B... 303 1e-80 UniRef50_B3PM57 Pol_IV_kappa DNA polymerase n=1 Tax=Mycoplasma a... 302 1e-80 UniRef50_C8WH43 UMUC domain protein DNA-repair protein n=3 Tax=B... 301 2e-80 UniRef50_C1E418 Predicted protein (Fragment) n=2 Tax=Micromonas ... 301 2e-80 UniRef50_A2FMN4 ImpB/MucB/SamB family protein n=1 Tax=Trichomona... 301 4e-80 UniRef50_B9DUB9 ImpB/mucB/samB family n=26 Tax=root RepID=B9DUB9... 300 5e-80 UniRef50_B3RS03 Putative uncharacterized protein n=1 Tax=Trichop... 300 5e-80 UniRef50_C7DHN7 DNA-directed DNA polymerase n=1 Tax=Candidatus M... 300 5e-80 UniRef50_C9RQ99 UMUC domain protein DNA-repair protein n=1 Tax=F... 300 6e-80 UniRef50_A5E4H3 Putative uncharacterized protein n=1 Tax=Loddero... 300 9e-80 UniRef50_C1A0W3 DNA polymerase IV n=9 Tax=Corynebacterineae RepI... 299 1e-79 UniRef50_C1DYT2 Predicted protein (Fragment) n=2 Tax=Micromonas ... 298 2e-79 UniRef50_D2QRX3 DNA-directed DNA polymerase n=1 Tax=Spirosoma li... 298 2e-79 UniRef50_Q09615 Protein ZK675.2, partially confirmed by transcri... 298 2e-79 UniRef50_D2RTA3 DNA-directed DNA polymerase n=1 Tax=Haloterrigen... 298 3e-79 UniRef50_UPI0001745AF1 DNA-directed DNA polymerase n=1 Tax=Verru... 298 3e-79 UniRef50_Q8RNE6 UmuC protein (Fragment) n=6 Tax=Proteobacteria R... 297 5e-79 UniRef50_C4M8P4 Deoxycytidyl transferase, putative n=2 Tax=Entam... 297 5e-79 UniRef50_B0D0P7 Predicted protein n=1 Tax=Laccaria bicolor S238N... 296 1e-78 UniRef50_A5DN15 Putative uncharacterized protein n=2 Tax=Pichia ... 296 1e-78 UniRef50_C5SGU5 DNA-directed DNA polymerase n=1 Tax=Asticcacauli... 296 1e-78 UniRef50_C2D8D4 Possible DNA-directed DNA polymerase n=1 Tax=Ato... 296 1e-78 UniRef50_B4WAK0 ImpB/MucB/SamB family n=1 Tax=Brevundimonas sp. ... 295 2e-78 UniRef50_B0UY97 Novel protein similar to vertebrate REV1 homolog... 295 2e-78 UniRef50_A8IAM0 DNA polymerase kappa (Fragment) n=1 Tax=Chlamydo... 295 3e-78 UniRef50_D1AVL7 DNA-directed DNA polymerase n=1 Tax=Streptobacil... 294 4e-78 UniRef50_Q4Q8C4 DNA polymerase kappa, putative (Dna polymerase i... 293 7e-78 UniRef50_C7I020 DNA-directed DNA polymerase n=1 Tax=Thiomonas in... 293 7e-78 UniRef50_C4XZD9 Putative uncharacterized protein n=1 Tax=Clavisp... 293 1e-77 UniRef50_Q1Q0T1 Putative uncharacterized protein n=1 Tax=Candida... 293 1e-77 UniRef50_UPI00006A0370 DNA repair protein REV1 (EC 2.7.7.-) (Rev... 292 2e-77 UniRef50_Q4D5I0 DNA polymerase kappa, putative n=4 Tax=Trypanoso... 291 2e-77 UniRef50_C4R1P8 Deoxycytidyl transferase, forms a complex with t... 291 2e-77 UniRef50_Q0F3E1 ImpB/MucB/SamB family protein n=2 Tax=Mariprofun... 291 3e-77 UniRef50_B7AW77 Putative uncharacterized protein n=3 Tax=Bacteri... 290 5e-77 UniRef50_UPI0000167505 COG0389: Nucleotidyltransferase/DNA polym... 290 7e-77 UniRef50_B8P0X5 Predicted protein (Fragment) n=1 Tax=Postia plac... 287 4e-76 UniRef50_B9WGP7 DNA repair protein, putative (Deoxycytidyl trans... 287 5e-76 UniRef50_D0L509 DNA-directed DNA polymerase n=2 Tax=Corynebacter... 286 8e-76 UniRef50_A8EUX3 DNA polymerase IV n=1 Tax=Arcobacter butzleri RM... 285 2e-75 UniRef50_D2BP58 ImpB/MucB/SamB family protein n=7 Tax=Firmicutes... 285 2e-75 UniRef50_Q6C2B9 YALI0F09141p n=1 Tax=Yarrowia lipolytica RepID=Q... 284 4e-75 UniRef50_A9KJA2 UMUC domain protein DNA-repair protein n=25 Tax=... 283 8e-75 UniRef50_C3DVJ9 DNA-damage repair protein n=5 Tax=Bacillus RepID... 283 9e-75 UniRef50_C8PJM6 DNA polymerase IV n=1 Tax=Campylobacter gracilis... 282 1e-74 UniRef50_A6QA22 DNA polymerase IV n=1 Tax=Sulfurovum sp. NBC37-1... 282 2e-74 UniRef50_A5EBX2 DNA polymerase IV (Pol IV 3) n=2 Tax=Bradyrhizob... 281 2e-74 UniRef50_Q5QZ82 DinP n=2 Tax=Idiomarina RepID=Q5QZ82_IDILO 281 3e-74 UniRef50_A3ZXX8 ImpB/MucB/SamB family protein n=2 Tax=Planctomyc... 281 3e-74 UniRef50_Q0FDK2 UMUC-like DNA-repair protein n=1 Tax=Rhodobacter... 280 7e-74 UniRef50_A9UXX3 Predicted protein (Fragment) n=2 Tax=Eukaryota R... 280 9e-74 UniRef50_UPI0000DB76DA PREDICTED: similar to Rev1 CG12189-PA n=1... 280 1e-73 UniRef50_C9KLN2 UV-damage repair protein n=1 Tax=Mitsuokella mul... 279 1e-73 UniRef50_B7GAF1 Predicted protein n=1 Tax=Phaeodactylum tricornu... 279 2e-73 UniRef50_A6DEG1 DNA-directed DNA polymerase n=1 Tax=Caminibacter... 278 2e-73 UniRef50_D2JWS9 Putative DNA-directed polymerase kappa n=1 Tax=F... 278 2e-73 UniRef50_B6K5D4 DNA polymerase IV n=1 Tax=Schizosaccharomyces ja... 278 3e-73 UniRef50_D1J7R2 DNA-damage repair protein MucB n=1 Tax=Mycoplasm... 278 3e-73 UniRef50_Q6BS95 DEHA2D10560p n=2 Tax=Debaryomyces hansenii RepID... 277 5e-73 UniRef50_A8IYH8 Deoxycytidyl transferase n=1 Tax=Chlamydomonas r... 277 6e-73 UniRef50_B3RQD9 Putative uncharacterized protein n=1 Tax=Trichop... 276 7e-73 UniRef50_A6X194 DNA-directed DNA polymerase n=5 Tax=Alphaproteob... 276 1e-72 UniRef50_D0A851 DNA polymerase kappa, putative n=17 Tax=Trypanos... 276 1e-72 UniRef50_Q2BYP9 Nucleotidyltransferase/DNA polymerase involved i... 276 1e-72 UniRef50_C5DG10 KLTH0D01518p n=1 Tax=Lachancea thermotolerans CB... 275 2e-72 UniRef50_C4Q7Z3 Terminal deoxycytidyl transferase rev1, putative... 275 2e-72 UniRef50_Q98R22 DNA-DAMAGE REPAIR PROTEIN MUCB n=1 Tax=Mycoplasm... 275 3e-72 UniRef50_B8BXL1 REV1 protein n=1 Tax=Thalassiosira pseudonana Re... 274 4e-72 UniRef50_A3TNV0 Putative uncharacterized protein n=1 Tax=Janibac... 273 7e-72 UniRef50_Q6KI15 DNA-damage repair protein n=1 Tax=Mycoplasma mob... 271 3e-71 UniRef50_A6Q1N4 DNA polymerase IV n=1 Tax=Nitratiruptor sp. SB15... 270 5e-71 UniRef50_P75241 Uncharacterized protein MG360 homolog n=3 Tax=My... 270 5e-71 UniRef50_B3QD61 DNA-directed DNA polymerase n=6 Tax=cellular org... 270 6e-71 UniRef50_A0LGS2 DNA-directed DNA polymerase n=1 Tax=Syntrophobac... 270 6e-71 UniRef50_UPI00017B5397 UPI00017B5397 related cluster n=1 Tax=Tet... 270 8e-71 UniRef50_A0RN38 DNA polymerase IV 1, putative n=1 Tax=Campylobac... 270 8e-71 UniRef50_C5KD43 DNA polymerase IV, putative n=3 Tax=Perkinsus ma... 270 1e-70 UniRef50_B9L8S0 DNA-directed DNA polymerase n=1 Tax=Nautilia pro... 269 2e-70 UniRef50_A8PR16 Putative uncharacterized protein n=1 Tax=Malasse... 268 3e-70 UniRef50_A4HGJ3 DNA polymerase kappa, putative n=4 Tax=Trypanoso... 267 5e-70 UniRef50_Q8EWQ4 DNA-damage repair protein MucB n=1 Tax=Mycoplasm... 267 5e-70 UniRef50_Q4PCE3 Putative uncharacterized protein n=1 Tax=Ustilag... 266 8e-70 UniRef50_Q7NUT5 UmuC protein n=1 Tax=Chromobacterium violaceum R... 265 3e-69 UniRef50_C2KQG7 ImpB/MucB/SamB family DNA-damage repair protein ... 265 3e-69 UniRef50_UPI000180D06B PREDICTED: similar to GH15415 n=1 Tax=Cio... 263 7e-69 UniRef50_B7LX10 Protein impB n=4 Tax=Enterobacteriaceae RepID=B7... 263 1e-68 UniRef50_Q30PG7 DNA-directed DNA polymerase n=2 Tax=Campylobacte... 263 1e-68 UniRef50_Q0IJ37 DNA polymerase iota n=5 Tax=Eukaryota RepID=Q0IJ... 262 2e-68 UniRef50_B7FT83 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 261 4e-68 UniRef50_C0WCL1 DNA-repair protein n=1 Tax=Acidaminococcus sp. D... 260 5e-68 UniRef50_C5DV83 ZYRO0D04664p n=1 Tax=Zygosaccharomyces rouxii Re... 260 6e-68 UniRef50_B9KDE6 UV damage repair protein, ImpB/MucB/SamB family ... 260 7e-68 UniRef50_A8ND78 ImpB/MucB/SamB family protein n=1 Tax=Brugia mal... 260 7e-68 UniRef50_C2JSZ5 Possible DNA-directed DNA polymerase (Fragment) ... 259 1e-67 UniRef50_Q9UNA4 DNA polymerase iota n=24 Tax=Chordata RepID=POLI... 259 1e-67 UniRef50_Q568P0 Zgc:110185 n=3 Tax=Clupeocephala RepID=Q568P0_DANRE 258 3e-67 UniRef50_Q6CIW8 KLLA0F23375p n=1 Tax=Kluyveromyces lactis RepID=... 258 4e-67 UniRef50_B5J6A6 ImpB/MucB/SamB family n=1 Tax=Octadecabacter ant... 256 1e-66 UniRef50_Q6KZW2 DNA polymerase IV n=1 Tax=Picrophilus torridus R... 256 1e-66 UniRef50_B5X367 DNA polymerase iota n=1 Tax=Salmo salar RepID=B5... 256 1e-66 UniRef50_P12689 DNA repair protein REV1 n=7 Tax=Saccharomyces ce... 255 2e-66 UniRef50_C6VKK8 UV-damage repair protein n=17 Tax=Bacteria RepID... 255 2e-66 UniRef50_D2RJB9 UMUC domain protein DNA-repair protein n=4 Tax=B... 254 3e-66 UniRef50_C2EU55 UMUC domain protein DNA-repair protein n=3 Tax=L... 253 7e-66 UniRef50_A4YEC1 DNA polymerase IV n=18 Tax=Sulfolobaceae RepID=D... 253 1e-65 UniRef50_Q759A8 ADR369Cp n=1 Tax=Eremothecium gossypii RepID=Q75... 252 2e-65 UniRef50_D1R481 Putative uncharacterized protein n=1 Tax=Parachl... 251 3e-65 UniRef50_UPI0000DB6FEF PREDICTED: similar to DNApol- CG7602-PA, ... 250 8e-65 UniRef50_B7GU73 UMUC domain protein DNA-repair protein n=32 Tax=... 249 1e-64 UniRef50_A8ZS28 DNA-directed DNA polymerase n=1 Tax=Desulfococcu... 248 3e-64 UniRef50_Q5JLR9 Os01g0757800 protein n=3 Tax=Oryza sativa Japoni... 248 3e-64 UniRef50_C2KWD3 ImpB/MucB/SamB family DNA-damage repair protein ... 247 5e-64 UniRef50_A5BB36 Putative uncharacterized protein n=1 Tax=Vitis v... 246 9e-64 UniRef50_UPI0000D5778B PREDICTED: similar to DNA polymerase eta ... 246 1e-63 UniRef50_D0MYB5 DNA polymerase kappa, putative n=1 Tax=Phytophth... 246 2e-63 UniRef50_UPI0000E48503 PREDICTED: hypothetical protein n=1 Tax=S... 245 2e-63 UniRef50_A7SBP1 Predicted protein (Fragment) n=1 Tax=Nematostell... 245 2e-63 UniRef50_B8C7E7 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 245 3e-63 UniRef50_Q3A3S4 Nucleotidyltransferase/DNA polymerase n=1 Tax=Pe... 244 3e-63 UniRef50_UPI0000397F7C COG0389: Nucleotidyltransferase/DNA polym... 243 7e-63 UniRef50_P34409 DNA polymerase kappa n=6 Tax=Chromadorea RepID=P... 243 1e-62 UniRef50_C6DZL5 DNA-directed DNA polymerase n=3 Tax=Geobacter Re... 242 2e-62 UniRef50_Q4AAV0 DNA polymerase IV n=5 Tax=Mycoplasma hyopneumoni... 242 2e-62 UniRef50_Q6FV13 Similar to uniprot|P12689 Saccharomyces cerevisi... 241 3e-62 UniRef50_A7TRR0 Putative uncharacterized protein n=1 Tax=Vanderw... 241 4e-62 UniRef50_UPI0000D56959 PREDICTED: similar to DNA polymerase iota... 240 6e-62 UniRef50_A8PB46 ImpB/MucB/SamB family protein n=1 Tax=Brugia mal... 240 7e-62 UniRef50_Q4A688 DNA polymerase IV n=2 Tax=Mycoplasma synoviae 53... 239 1e-61 UniRef50_C6HJM8 DNA damage repair protein Mus42 n=1 Tax=Ajellomy... 238 3e-61 UniRef50_C5J784 DNA polymerase IV n=1 Tax=Mycoplasma conjunctiva... 238 3e-61 UniRef50_A4E7R3 Putative uncharacterized protein n=2 Tax=Collins... 235 2e-60 UniRef50_B8NVT6 DNA-directed polymerase kappa, putative n=1 Tax=... 235 3e-60 UniRef50_B4QLD4 GD13564 n=1 Tax=Drosophila simulans RepID=B4QLD4... 234 4e-60 UniRef50_Q54KS3 UMUC-like DNA-repair protein n=1 Tax=Dictyosteli... 233 1e-59 UniRef50_D1I1G6 Whole genome shotgun sequence of line PN40024, s... 232 2e-59 UniRef50_Q17IT1 Terminal deoxycytidyl transferase rev1 n=1 Tax=A... 231 4e-59 UniRef50_UPI0001850634 polymerase (DNA directed) iota n=1 Tax=Na... 230 7e-59 UniRef50_O48586 DNA-damage-inducible protein P n=6 Tax=Embryophy... 229 1e-58 UniRef50_Q6R286 SOS inducible DNA polymerase (Fragment) n=15 Tax... 229 1e-58 UniRef50_B2I405 Nucleotidyltransferase/DNA polymerase involved i... 229 2e-58 UniRef50_B3RPL1 Putative uncharacterized protein (Fragment) n=1 ... 225 2e-57 UniRef50_D2VGP4 Predicted protein n=1 Tax=Naegleria gruberi RepI... 224 4e-57 UniRef50_UPI000038E47A DNA polymerase IV n=1 Tax=Ferroplasma aci... 223 9e-57 UniRef50_C4VB58 Putative uncharacterized protein n=1 Tax=Nosema ... 223 1e-56 UniRef50_UPI00017E10E6 DNA-directed DNA polymerase eta n=2 Tax=A... 221 3e-56 UniRef50_B4H4B7 GL20704 n=1 Tax=Drosophila persimilis RepID=B4H4... 221 3e-56 UniRef50_A4HNL7 DNA damage repair protein, putative n=3 Tax=Leis... 220 7e-56 UniRef50_D1BE66 Nucleotidyltransferase/DNA polymerase involved i... 218 4e-55 UniRef50_Q7QBI8 AGAP003157-PA (Fragment) n=3 Tax=Culicidae RepID... 218 4e-55 UniRef50_D0SQN6 Predicted protein n=1 Tax=Acinetobacter junii SH... 217 8e-55 UniRef50_C4Q962 Rab geranylgeranyl transferase alpha subunit, pu... 216 1e-54 UniRef50_O48585 Similarity to DNA-damage-inducible protein P n=2... 214 3e-54 UniRef50_Q9VHV1 DNApol-iota, isoform A n=12 Tax=Drosophila RepID... 214 5e-54 UniRef50_B4VAW5 Putative uncharacterized protein n=1 Tax=Strepto... 214 6e-54 UniRef50_A4EK23 DNA polymerase IV-AMBIGUITY n=3 Tax=Rhodobactera... 213 1e-53 UniRef50_C5LMV6 Dna polymerase eta, putative n=1 Tax=Perkinsus m... 211 3e-53 UniRef50_Q828V5 Putative uncharacterized protein n=3 Tax=Strepto... 211 3e-53 UniRef50_Q1RLS3 Zgc:136881 n=6 Tax=Clupeocephala RepID=Q1RLS3_DANRE 211 5e-53 UniRef50_C3ZXE4 Putative uncharacterized protein (Fragment) n=1 ... 210 9e-53 UniRef50_UPI000192707B PREDICTED: similar to predicted protein, ... 209 1e-52 UniRef50_UPI000180C75E PREDICTED: similar to polymerase (DNA dir... 209 2e-52 UniRef50_Q4DBR5 DNA damage repair protein, putative n=4 Tax=Tryp... 209 2e-52 UniRef50_A7AX68 ImpB/MucB/SamB family protein n=1 Tax=Babesia bo... 209 2e-52 UniRef50_O17219 Polh (Dna polymerase eta) homolog protein 1, con... 206 9e-52 UniRef50_A3VTP3 ImpB/MucB/SamB family protein n=1 Tax=Parvularcu... 203 9e-51 UniRef50_C3RLA4 DNA polymerase IV n=4 Tax=Bacteria RepID=C3RLA4_... 203 1e-50 UniRef50_A4I3M2 DNA polymerase kappa, putative n=2 Tax=Leishmani... 202 3e-50 UniRef50_A7I053 DNA-directed DNA polymerase n=1 Tax=Campylobacte... 201 4e-50 UniRef50_A8BDY9 DINP protein human, muc B family n=2 Tax=Giardia... 201 6e-50 UniRef50_B9Q7A7 Terminal deoxycytidyl transferase rev1, putative... 197 7e-49 UniRef50_C4ZE13 DNA-directed DNA polymerase n=1 Tax=Eubacterium ... 196 1e-48 UniRef50_B9SQ81 DNA polymerase eta, putative n=1 Tax=Ricinus com... 195 3e-48 UniRef50_C0SPA8 DNA repair protein homolog yobH n=15 Tax=root Re... 193 1e-47 UniRef50_C0WP28 Possible DNA-directed DNA polymerase n=3 Tax=Lac... 192 1e-47 UniRef50_UPI0001B4E7CA hypothetical protein SvirD4_08371 n=2 Tax... 191 7e-47 UniRef50_B0NK47 Putative uncharacterized protein n=1 Tax=Clostri... 190 7e-47 UniRef50_B5H9Q9 Putative uncharacterized protein n=1 Tax=Strepto... 190 1e-46 UniRef50_Q2TTW3 UmuC n=8 Tax=Enterobacteriaceae RepID=Q2TTW3_ECOLX 189 2e-46 UniRef50_D0NYK2 Putative uncharacterized protein n=1 Tax=Phytoph... 189 2e-46 UniRef50_Q9UBT6 DNA polymerase kappa n=23 Tax=Tetrapoda RepID=PO... 188 3e-46 UniRef50_C1SJI9 Nucleotidyltransferase/DNA polymerase involved i... 188 3e-46 UniRef50_C9SBX6 DNA polymerase IV n=1 Tax=Verticillium albo-atru... 187 9e-46 UniRef50_D1WSU8 DNA-directed DNA polymerase n=3 Tax=Streptomyces... 185 3e-45 UniRef50_A0DAQ7 Chromosome undetermined scaffold_43, whole genom... 184 7e-45 UniRef50_B7QI10 DNA polymerase eta, putative n=2 Tax=Ixodes scap... 182 1e-44 UniRef50_B6VBS6 Putative uncharacterized protein n=1 Tax=Caenorh... 181 3e-44 UniRef50_Q5Q9H1 Polymerase kappa isoform 8 n=14 Tax=Eumetazoa Re... 180 8e-44 UniRef50_B6HVX2 Pc22g06410 protein n=8 Tax=Trichocomaceae RepID=... 179 2e-43 UniRef50_B5HS70 Putative uncharacterized protein n=1 Tax=Strepto... 176 2e-42 UniRef50_D1C5S3 DNA-directed DNA polymerase n=1 Tax=Sphaerobacte... 176 2e-42 UniRef50_B2I406 Nucleotidyltransferase/DNA polymerase involved i... 176 2e-42 UniRef50_B2ABI5 Predicted CDS Pa_1_20790 n=4 Tax=Sordariomycetes... 175 4e-42 UniRef50_A8JCD8 DNA polymerase eta/iota n=1 Tax=Chlamydomonas re... 174 4e-42 UniRef50_A4S4R4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 174 5e-42 UniRef50_B9NI90 Predicted protein n=36 Tax=cellular organisms Re... 174 5e-42 UniRef50_UPI0001926C03 PREDICTED: similar to polymerase (DNA dir... 174 7e-42 UniRef50_Q99QR3 Putative uncharacterized protein SCP1.321 n=4 Ta... 174 7e-42 UniRef50_B0W8N7 DNA polymerase eta n=1 Tax=Culex quinquefasciatu... 174 8e-42 UniRef50_C7CFB9 Putative DNA-directed DNA polymerase n=1 Tax=Met... 173 1e-41 UniRef50_A4RZL9 Predicted protein n=1 Tax=Ostreococcus lucimarin... 172 2e-41 UniRef50_B2VTY6 Sister chromatid cohesion protein Eso1 n=8 Tax=L... 171 7e-41 UniRef50_Q7PXH4 AGAP001404-PA n=4 Tax=Coelomata RepID=Q7PXH4_ANOGA 170 9e-41 UniRef50_D2LKT9 Nucleotidyltransferase/DNA polymerase involved i... 170 1e-40 UniRef50_C4Q445 DNA polymerase eta, putative n=3 Tax=Schistosoma... 169 2e-40 UniRef50_A2QJ22 Contig An04c0170, complete genome n=2 Tax=Asperg... 169 2e-40 UniRef50_D1X5H2 DNA-directed DNA polymerase n=1 Tax=Streptomyces... 167 5e-40 UniRef50_Q4SL60 Chromosome 17 SCAF14563, whole genome shotgun se... 167 6e-40 UniRef50_A4TZ00 UmuC protein n=1 Tax=Magnetospirillum gryphiswal... 167 7e-40 UniRef50_Q5Q9G7 Polymerase kappa isoform 2 n=34 Tax=Deuterostomi... 165 3e-39 UniRef50_B5GWK1 Putative uncharacterized protein n=1 Tax=Strepto... 164 6e-39 UniRef50_C1E586 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 164 6e-39 UniRef50_Q38C71 DNA polymerase eta, putative n=4 Tax=Trypanosoma... 164 7e-39 UniRef50_Q9Y253 DNA polymerase eta n=14 Tax=Amniota RepID=POLH_H... 164 7e-39 UniRef50_C8VFX8 DNA polymerase iota, putative (AFU_orthologue; A... 164 8e-39 UniRef50_D1ZXB0 C-terminus not complete (Fragment) n=1 Tax=Sorda... 161 5e-38 UniRef50_UPI00003828C5 COG0389: Nucleotidyltransferase/DNA polym... 157 7e-37 UniRef50_O42917 N-acetyltransferase eso1 n=1 Tax=Schizosaccharom... 157 7e-37 UniRef50_C7YPE8 Putative uncharacterized protein n=2 Tax=Nectria... 156 1e-36 UniRef50_B6K7S5 Sister chromatid cohesion protein Eso1 n=1 Tax=S... 155 2e-36 UniRef50_UPI00019102E2 DNA polymerase IV n=4 Tax=cellular organi... 154 5e-36 UniRef50_UPI0001792F1F PREDICTED: similar to polymerase (DNA dir... 153 1e-35 UniRef50_A8N619 Putative uncharacterized protein n=1 Tax=Coprino... 152 3e-35 UniRef50_B7ANI6 Putative uncharacterized protein n=1 Tax=Bactero... 150 1e-34 UniRef50_A9SDY0 Predicted protein n=1 Tax=Physcomitrella patens ... 150 1e-34 UniRef50_C9SAM9 Putative uncharacterized protein n=1 Tax=Vertici... 150 1e-34 UniRef50_C8VB00 DNA polymerase eta (Eurofung) n=19 Tax=Eurotiomy... 149 3e-34 UniRef50_C9SHT7 DNA polymerase IV n=1 Tax=Verticillium albo-atru... 147 7e-34 UniRef50_Q0V979 Zgc:136881 n=6 Tax=Eumetazoa RepID=Q0V979_DANRE 146 1e-33 UniRef50_B7FW32 Predicted protein n=1 Tax=Phaeodactylum tricornu... 145 2e-33 UniRef50_B2B126 Predicted CDS Pa_3_8130 n=2 Tax=Sordariales RepI... 141 5e-32 UniRef50_Q92ZK0 Putative uncharacterized protein n=1 Tax=Sinorhi... 139 2e-31 UniRef50_B7FSY6 Predicted protein n=1 Tax=Phaeodactylum tricornu... 137 6e-31 UniRef50_C1EEZ5 Predicted protein (Fragment) n=1 Tax=Micromonas ... 137 7e-31 UniRef50_Q6DCL9 Polh-prov protein n=4 Tax=Tetrapoda RepID=Q6DCL9... 135 2e-30 UniRef50_A2WV83 Putative uncharacterized protein n=1 Tax=Oryza s... 135 4e-30 UniRef50_B7ZA36 cDNA, FLJ79050, highly similar to DNA polymerase... 132 3e-29 UniRef50_C4JRK3 Putative uncharacterized protein n=3 Tax=Onygena... 131 5e-29 UniRef50_C1E7T2 Umuc-like DNA repair protein n=1 Tax=Micromonas ... 130 9e-29 UniRef50_A9UR36 Predicted protein n=1 Tax=Monosiga brevicollis R... 130 1e-28 UniRef50_C4QYV7 Putative uncharacterized protein n=1 Tax=Pichia ... 129 2e-28 UniRef50_C3KFQ7 Putative ultraviolet light resistance protein B ... 129 2e-28 UniRef50_Q9GNC0 DNA polymerase eta n=10 Tax=Drosophila RepID=Q9G... 128 4e-28 UniRef50_Q6CYA8 KLLA0A01848p n=1 Tax=Kluyveromyces lactis RepID=... 127 6e-28 UniRef50_C7CNB5 Putative uncharacterized protein n=1 Tax=Methylo... 125 2e-27 UniRef50_A4RD58 Putative uncharacterized protein n=1 Tax=Magnapo... 124 5e-27 UniRef50_C7X3F8 UvrA n=3 Tax=Enterococcus faecalis RepID=C7X3F8_... 124 9e-27 UniRef50_Q56YN7 Putative uncharacterized protein At1g49980 n=1 T... 124 1e-26 UniRef50_A7VU61 Putative uncharacterized protein n=1 Tax=Clostri... 122 2e-26 UniRef50_UPI0000D878BE hypothetical protein CIMG_06713 n=1 Tax=C... 118 3e-25 UniRef50_D1R480 Putative uncharacterized protein n=1 Tax=Parachl... 118 3e-25 UniRef50_C5DLU3 KLTH0G03586p n=2 Tax=Saccharomycetaceae RepID=C5... 118 3e-25 UniRef50_A1VVG9 DNA-directed DNA polymerase n=1 Tax=Polaromonas ... 118 4e-25 UniRef50_B4VGM9 Putative uncharacterized protein n=2 Tax=Bacteri... 118 5e-25 UniRef50_Q015X2 DNA polymerase iota/DNA damage inducible protein... 117 6e-25 UniRef50_Q14N03 Putative dna polymerase iv c-terminal truncated ... 117 9e-25 UniRef50_Q4HDP3 Putative uncharacterized protein n=1 Tax=Campylo... 117 1e-24 UniRef50_C8Q3E7 Damage inducible protein P (DNA polymerase IV) (... 115 3e-24 UniRef50_B4DB63 Nucleotidyltransferase/DNA polymerase involved i... 115 3e-24 UniRef50_A7F1S2 Putative uncharacterized protein n=1 Tax=Sclerot... 113 2e-23 UniRef50_A8LY61 UMUC domain protein DNA-repair protein n=24 Tax=... 112 2e-23 UniRef50_B9BQL7 UmuC protein n=2 Tax=Burkholderia multivorans Re... 111 5e-23 UniRef50_C2FQ53 UvrA family protein n=1 Tax=Lactobacillus planta... 111 5e-23 UniRef50_B5BUV4 DNA polymerase eta n=4 Tax=Agaricales RepID=B5BU... 110 8e-23 UniRef50_B5I0P9 Putative uncharacterized protein n=1 Tax=Strepto... 110 1e-22 UniRef50_Q75EE5 AAR136Wp n=1 Tax=Eremothecium gossypii RepID=Q75... 109 2e-22 UniRef50_C5IWL2 UV repair DNA polymerase n=21 Tax=Gammaproteobac... 109 2e-22 UniRef50_A7HW56 Nucleotidyltransferase/DNA polymerase n=1 Tax=Pa... 109 2e-22 UniRef50_Q04049 DNA polymerase eta n=8 Tax=Saccharomycetaceae Re... 109 2e-22 UniRef50_A8B5P1 DNA damage repair protein n=2 Tax=Giardia intest... 109 2e-22 UniRef50_B1ZZZ2 Nucleotidyltransferase/DNA polymerase involved i... 109 3e-22 UniRef50_C5JEX9 Sister chromatid cohesion protein n=2 Tax=Ajello... 109 3e-22 UniRef50_A9VB80 Predicted protein n=1 Tax=Monosiga brevicollis R... 107 6e-22 UniRef50_C8XBY5 UMUC domain protein DNA-repair protein n=23 Tax=... 107 9e-22 UniRef50_C1F5L8 Putative uncharacterized protein n=2 Tax=Acidoba... 107 9e-22 UniRef50_A8GJ69 UV protection protein n=1 Tax=Serratia proteamac... 106 1e-21 UniRef50_C1G404 Putative uncharacterized protein n=3 Tax=Paracoc... 106 2e-21 UniRef50_C5NXP3 DNA-damage repair protein n=1 Tax=Gemella haemol... 105 2e-21 UniRef50_A7BC74 Putative uncharacterized protein n=1 Tax=Actinom... 105 3e-21 UniRef50_A3WZ00 DNA polymerase IV n=1 Tax=Nitrobacter sp. Nb-311... 104 5e-21 UniRef50_UPI0001745839 nucleotidyltransferase/DNA polymerase inv... 104 5e-21 UniRef50_UPI0001913C3A DNA polymerase V subunit UmuC n=1 Tax=Sal... 104 6e-21 UniRef50_A0LTK7 Putative uncharacterized protein n=1 Tax=Acidoth... 104 6e-21 UniRef50_Q5BYF2 SJCHGC07422 protein (Fragment) n=1 Tax=Schistoso... 104 7e-21 UniRef50_B5J847 Putative uncharacterized protein n=2 Tax=Octadec... 103 9e-21 UniRef50_A5LXS6 DNA-damage inducible protein P n=2 Tax=Streptoco... 103 1e-20 UniRef50_A1VWD4 DNA-directed DNA polymerase n=1 Tax=Polaromonas ... 103 1e-20 UniRef50_A9UX99 Predicted protein n=1 Tax=Monosiga brevicollis R... 103 2e-20 UniRef50_C0W385 DNA-repair protein n=1 Tax=Actinomyces urogenita... 101 5e-20 UniRef50_Q3BNM7 ImpB/MucB/SamB family protein (N-terminal) n=8 T... 101 5e-20 UniRef50_C9Y1T2 Putative uncharacterized protein n=1 Tax=Cronoba... 100 7e-20 UniRef50_B6AK40 DNA polymerase eta, putative n=1 Tax=Cryptospori... 100 8e-20 UniRef50_D1SIT0 Nucleotidyltransferase/DNA polymerase involved i... 100 9e-20 UniRef50_UPI0001874386 polymerase involved in DNA repair n=1 Tax... 100 1e-19 UniRef50_C6VUA5 Nucleotidyltransferase/DNA polymerase involved i... 100 1e-19 UniRef50_B7AU37 Putative uncharacterized protein n=1 Tax=Bactero... 100 1e-19 UniRef50_Q86ZI6 Related to DNA Polymerase iota (POLI) n=3 Tax=So... 100 2e-19 UniRef50_B1LUJ0 Putative uncharacterized protein n=1 Tax=Methylo... 100 2e-19 UniRef50_B9JES9 Nucleotidyltransferase protein n=14 Tax=Rhizobia... 100 2e-19 UniRef50_A5VH01 Nucleotidyltransferase/DNA polymerase involved i... 99 2e-19 UniRef50_Q6CDC9 YALI0C01573p n=1 Tax=Yarrowia lipolytica RepID=Q... 99 3e-19 UniRef50_Q4PIG2 Putative uncharacterized protein n=1 Tax=Ustilag... 99 3e-19 UniRef50_B6BEE1 Nucleotidyltransferase/DNA polymerase involved i... 99 4e-19 UniRef50_C6MGZ1 DNA-directed DNA polymerase n=1 Tax=Nitrosomonas... 98 5e-19 UniRef50_D2LKG4 DNA-directed DNA polymerase n=1 Tax=Rhodomicrobi... 98 6e-19 UniRef50_A1WWK8 Putative uncharacterized protein n=1 Tax=Halorho... 97 1e-18 UniRef50_Q3SQD1 DNA-directed DNA polymerase n=14 Tax=Bradyrhizob... 97 1e-18 UniRef50_D0CTA7 Nucleotidyltransferase/DNA polymerase involved i... 97 1e-18 UniRef50_B9PWD1 DNA polymerase eta, putative n=3 Tax=Toxoplasma ... 97 1e-18 UniRef50_UPI00016987CF DNA-directed DNA polymerase n=1 Tax=Endor... 96 2e-18 UniRef50_Q6BM10 DEHA2F09196p n=2 Tax=Debaryomyces hansenii RepID... 96 2e-18 UniRef50_Q0ANL5 Putative uncharacterized protein n=1 Tax=Maricau... 96 2e-18 UniRef50_A1SHX1 Putative DNA-directed DNA polymerase n=1 Tax=Noc... 96 2e-18 UniRef50_C4DV05 Nucleotidyltransferase/DNA polymerase involved i... 96 3e-18 UniRef50_Q4PF20 Putative uncharacterized protein n=1 Tax=Ustilag... 96 3e-18 UniRef50_Q5KGG8 Eta DNA polymerase, putative n=2 Tax=Filobasidie... 95 6e-18 UniRef50_A5DE10 Putative uncharacterized protein n=2 Tax=Pichia ... 94 7e-18 UniRef50_UPI0001C31AE4 hypothetical protein Cwoe_4251 n=1 Tax=Co... 94 7e-18 UniRef50_D2DXS2 Nucleotidyltransferase/DNA polymerase n=1 Tax=un... 94 7e-18 UniRef50_D0WMM1 Putative DNA repair polymerase n=1 Tax=Actinomyc... 94 7e-18 UniRef50_A3EWL6 Polymerase ATREV1-444 n=1 Tax=Arabidopsis thalia... 94 7e-18 UniRef50_Q4QCF2 DNA polymerase eta, putative n=3 Tax=Leishmania ... 94 8e-18 UniRef50_D0LTL3 Nucleotidyltransferase/DNA polymerase involved i... 94 8e-18 UniRef50_C7MCU6 Nucleotidyltransferase/DNA polymerase involved i... 94 9e-18 UniRef50_Q1IJA4 Nucleotidyltransferase/DNA polymerase involved i... 94 1e-17 UniRef50_C0BD29 Putative uncharacterized protein n=1 Tax=Coproco... 94 1e-17 UniRef50_A0NRW5 Putative uncharacterized protein n=1 Tax=Labrenz... 93 1e-17 UniRef50_D0LH57 Putative uncharacterized protein n=1 Tax=Haliang... 93 2e-17 UniRef50_UPI00019063AA putative nucleotidyltransferase protein n... 93 2e-17 UniRef50_C7DDU4 Nucleotidyltransferase/DNA polymerase involved i... 92 3e-17 UniRef50_A7VEX4 Putative uncharacterized protein n=1 Tax=Clostri... 92 4e-17 UniRef50_C2QVF5 DNA-damage repair protein n=1 Tax=Bacillus cereu... 92 4e-17 UniRef50_Q0G3S1 Putative uncharacterized protein n=1 Tax=Fulvima... 92 5e-17 UniRef50_D2LC32 Putative uncharacterized protein n=1 Tax=Rhodomi... 92 5e-17 UniRef50_D2Q395 Nucleotidyltransferase/DNA polymerase-like prote... 91 6e-17 UniRef50_Q14N04 Putative dna polymerase iv n-terminal and c-term... 91 7e-17 UniRef50_Q0UKS6 Putative uncharacterized protein n=1 Tax=Phaeosp... 91 9e-17 UniRef50_A9H958 Putative uncharacterized protein n=3 Tax=Alphapr... 91 1e-16 UniRef50_B9L412 Putative uncharacterized protein n=1 Tax=Thermom... 90 2e-16 UniRef50_B9KR94 DNA repair enzyme n=4 Tax=Rhodobacter sphaeroide... 90 2e-16 UniRef50_Q2W1Y7 Putative uncharacterized protein n=1 Tax=Magneto... 89 2e-16 UniRef50_Q1N9P2 Putative uncharacterized protein n=1 Tax=Sphingo... 89 2e-16 UniRef50_B9Q2G6 DNA polymerase iota, putative n=2 Tax=Toxoplasma... 89 3e-16 UniRef50_B6K9Y1 DNA polymerase, putative n=1 Tax=Toxoplasma gond... 89 3e-16 UniRef50_Q6NJ12 Putative uncharacterized protein n=1 Tax=Coryneb... 89 4e-16 UniRef50_A3LN71 DNA polymerase eta subunit n=1 Tax=Pichia stipit... 88 6e-16 UniRef50_Q1NNX6 Putative uncharacterized protein n=1 Tax=delta p... 88 7e-16 UniRef50_B3L3B7 Putative uncharacterized protein n=1 Tax=Plasmod... 87 8e-16 UniRef50_A8UAE9 Putative uncharacterized protein n=1 Tax=Carnoba... 87 9e-16 UniRef50_C0G3K2 Cytoplasmic protein n=39 Tax=Rhizobiales RepID=C... 87 9e-16 UniRef50_C1D2K9 Putative Y-family DNA polymerase n=1 Tax=Deinoco... 87 1e-15 UniRef50_Q67N70 Putative uncharacterized protein n=1 Tax=Symbiob... 87 1e-15 UniRef50_C4Y9R5 Putative uncharacterized protein n=1 Tax=Clavisp... 86 2e-15 UniRef50_B2AJW9 Putative DNA polymerase, Y family n=8 Tax=Burkho... 86 2e-15 UniRef50_C6XYX1 Cytosolic protein n=4 Tax=Sphingobacteriales Rep... 86 2e-15 UniRef50_A7F9S4 Putative uncharacterized protein n=1 Tax=Sclerot... 86 2e-15 UniRef50_B8C8E2 Predicted protein n=1 Tax=Thalassiosira pseudona... 86 3e-15 UniRef50_A4XTN1 Nucleotidyltransferase/DNA polymerase involved i... 86 3e-15 UniRef50_A5K6H4 Putative uncharacterized protein n=1 Tax=Plasmod... 85 4e-15 UniRef50_A9FIX7 Putative uncharacterized protein n=1 Tax=Sorangi... 85 4e-15 UniRef50_B9DP45 Truncated ImpB/MucB/SamB family protein (Fragmen... 85 5e-15 UniRef50_A5FTH4 Nucleotidyltransferase/DNA polymerase involved i... 85 5e-15 UniRef50_D1BHX8 Nucleotidyltransferase/DNA polymerase involved i... 85 5e-15 UniRef50_Q55931 UmuC protein n=1 Tax=Synechocystis sp. PCC 6803 ... 85 5e-15 UniRef50_Q4QCF3 DNA polymerase eta, putative n=3 Tax=Leishmania ... 84 1e-14 UniRef50_Q1YPI9 Putative uncharacterized protein n=1 Tax=gamma p... 83 2e-14 UniRef50_A5DV91 Putative uncharacterized protein n=1 Tax=Loddero... 83 2e-14 UniRef50_C5B9L5 DNA polymerase IV n=1 Tax=Edwardsiella ictaluri ... 83 2e-14 UniRef50_UPI0001BC9B94 impB/mucB/samB family protein n=1 Tax=Pse... 82 3e-14 UniRef50_Q2Y7D7 DNA polymerase V n=1 Tax=Nitrosospira multiformi... 82 3e-14 UniRef50_Q5CPV1 DinB/family X-type DNA polymerase n=1 Tax=Crypto... 82 3e-14 UniRef50_B4S261 Nucleotidyltransferase/DNA polymerase involved i... 82 3e-14 UniRef50_UPI0001AEC5B6 Nucleotidyltransferase/DNA polymerase inv... 82 3e-14 UniRef50_A3ZPQ4 Putative uncharacterized protein n=2 Tax=Plancto... 82 4e-14 UniRef50_A5V5C0 Nucleotidyltransferase/DNA polymerase involved i... 82 4e-14 UniRef50_C7R3Y5 Nucleotidyltransferase/DNA polymerase involved i... 82 5e-14 UniRef50_C5T314 UMUC-like DNA-repair protein n=1 Tax=Acidovorax ... 81 7e-14 UniRef50_B9WB35 DNA polymerase eta, putative n=3 Tax=Candida Rep... 81 8e-14 UniRef50_D0XS46 Nucleotidyltransferase/DNA polymerase involved i... 81 9e-14 UniRef50_B5J622 Putative uncharacterized protein n=1 Tax=Octadec... 81 1e-13 UniRef50_A1BA10 Putative uncharacterized protein n=6 Tax=Rhodoba... 80 1e-13 UniRef50_B1VF25 Putative DNA polymerase involved in DNA repair n... 79 2e-13 UniRef50_Q6F8Z6 Fragment of component of DNA polymerase V (UmuC)... 79 3e-13 UniRef50_Q8I347 Putative uncharacterized protein n=1 Tax=Plasmod... 79 3e-13 UniRef50_Q4UFQ5 Putative uncharacterized protein n=2 Tax=Theiler... 79 3e-13 UniRef50_O31841 DNA repair protein homolog yozK n=173 Tax=Bacill... 79 4e-13 UniRef50_C8NM76 Polymerase involved in DNA repair n=15 Tax=Coryn... 78 6e-13 UniRef50_A0Z5A6 Aspartate decarboxylase n=1 Tax=marine gamma pro... 78 6e-13 UniRef50_C7Q6R5 Putative uncharacterized protein n=1 Tax=Catenul... 78 7e-13 UniRef50_Q93QE1 Orf5 n=6 Tax=Streptococcus RepID=Q93QE1_STRPN 77 9e-13 UniRef50_Q6A779 Nucleotidyltransferase/DNA polymerase involved i... 77 1e-12 UniRef50_Q47EP4 Putative uncharacterized protein n=1 Tax=Dechlor... 77 1e-12 UniRef50_A0YAE9 Putative uncharacterized protein n=1 Tax=marine ... 77 1e-12 UniRef50_A4AKV5 Putative uncharacterized protein n=1 Tax=marine ... 77 2e-12 UniRef50_C8WVC3 DNA repair nucleotidyltransferase/DNA polymerase... 76 2e-12 UniRef50_A6GCV2 Putative uncharacterized protein n=1 Tax=Plesioc... 75 3e-12 UniRef50_Q384F9 Putative uncharacterized protein n=3 Tax=Trypano... 75 3e-12 UniRef50_A7MP32 Putative uncharacterized protein n=1 Tax=Cronoba... 75 4e-12 UniRef50_A9VZM8 DNA-directed DNA polymerase n=4 Tax=Methylobacte... 75 5e-12 UniRef50_A8J5N9 DNA polymerase eta/iota (Fragment) n=1 Tax=Chlam... 75 5e-12 UniRef50_B3T2L8 Putative uncharacterized protein n=1 Tax=uncultu... 75 7e-12 UniRef50_Q4D5H7 Putative uncharacterized protein n=2 Tax=Trypano... 75 7e-12 UniRef50_Q1LFT0 Putative uncharacterized protein n=1 Tax=Cupriav... 74 8e-12 UniRef50_B5EJ93 Putative uncharacterized protein n=2 Tax=Acidith... 74 1e-11 UniRef50_C5BVF2 DNA-repair protein n=2 Tax=Micrococcineae RepID=... 74 1e-11 UniRef50_C6QBZ4 Putative uncharacterized protein n=1 Tax=Hyphomi... 74 1e-11 UniRef50_B7S067 Putative uncharacterized protein n=1 Tax=marine ... 74 1e-11 UniRef50_UPI00006CB3A6 hypothetical protein TTHERM_00659050 n=1 ... 74 2e-11 UniRef50_C5GUZ9 DNA polymerase iota n=4 Tax=Ajellomyces RepID=C5... 73 2e-11 UniRef50_C8RUC9 DNA polymerase involved in DNA repair n=2 Tax=Co... 72 3e-11 UniRef50_C1MYC1 Predicted protein n=1 Tax=Micromonas pusilla CCM... 72 3e-11 UniRef50_Q2W2X2 Nucleotidyltransferase/DNA polymerase involved i... 72 3e-11 UniRef50_Q8TS33 Predicted protein n=1 Tax=Methanosarcina acetivo... 72 3e-11 UniRef50_D1PMK7 UV-damage repair protein n=1 Tax=Subdoligranulum... 72 3e-11 UniRef50_Q0BZD3 Putative uncharacterized protein n=1 Tax=Hyphomo... 72 3e-11 UniRef50_C4LH03 Putative DNA polymerase involved in DNA repair n... 72 4e-11 UniRef50_Q2SJZ5 Nucleotidyltransferase/DNA polymerase involved i... 71 7e-11 UniRef50_A4JFF8 Putative uncharacterized protein n=2 Tax=Burkhol... 71 8e-11 UniRef50_A9CXS2 Putative nucleotidyltransferase protein n=1 Tax=... 71 1e-10 UniRef50_Q2Y5T6 Putative uncharacterized protein n=1 Tax=Nitroso... 70 1e-10 UniRef50_B5JLQ0 Putative uncharacterized protein n=1 Tax=Verruco... 70 1e-10 UniRef50_Q7UJH7 Putative uncharacterized protein n=1 Tax=Rhodopi... 70 1e-10 UniRef50_B8CNV0 Nucleotidyltransferase/DNA polymerase involved i... 70 1e-10 UniRef50_Q7R724 Putative uncharacterized protein PY07765 (Fragme... 70 2e-10 UniRef50_A8UAE8 Putative uncharacterized protein n=1 Tax=Carnoba... 70 2e-10 UniRef50_C4QSD8 DNA polymerase IV / kappa, putative (Fragment) n... 70 2e-10 UniRef50_B2T2I7 Putative uncharacterized protein n=3 Tax=Burkhol... 68 5e-10 UniRef50_A7HCF7 Putative uncharacterized protein n=2 Tax=Anaerom... 68 6e-10 UniRef50_A7MTX6 Putative uncharacterized protein n=3 Tax=Vibrio ... 68 7e-10 UniRef50_Q0PGJ8 AIBO80 (Fragment) n=1 Tax=Bos taurus RepID=Q0PGJ... 68 8e-10 UniRef50_A9IPJ8 Putative uncharacterized protein n=4 Tax=Bordete... 67 1e-09 UniRef50_D1UT44 Putative uncharacterized protein n=1 Tax=Burkhol... 67 1e-09 UniRef50_C6QRJ6 Putative uncharacterized protein n=1 Tax=Geobaci... 67 1e-09 UniRef50_Q08N74 Nucleotidyltransferase/DNA polymerase involved i... 67 2e-09 UniRef50_A9MHU5 Putative uncharacterized protein n=1 Tax=Salmone... 66 3e-09 UniRef50_C6XNZ3 Putative uncharacterized protein n=1 Tax=Hirschi... 65 3e-09 UniRef50_UPI0001BC93B4 ultraviolet light resistance protein B, i... 65 4e-09 UniRef50_B6R5I9 Protein ImuB n=1 Tax=Pseudovibrio sp. JE062 RepI... 65 4e-09 UniRef50_A3JJR9 DinP DNA polymerase-like protein n=3 Tax=Marinob... 65 4e-09 UniRef50_B8ELP7 Putative uncharacterized protein n=1 Tax=Methylo... 65 7e-09 UniRef50_B8H428 Protein imuB n=6 Tax=Alphaproteobacteria RepID=I... 64 9e-09 UniRef50_B8IIJ8 Putative uncharacterized protein n=1 Tax=Methylo... 64 1e-08 UniRef50_Q2NAX5 Putative uncharacterized protein n=3 Tax=Erythro... 64 1e-08 UniRef50_A2SG06 Putative uncharacterized protein n=2 Tax=Burkhol... 64 1e-08 UniRef50_Q5QUT8 Homolog of DinP DNA polymerase involved in DNA r... 64 1e-08 UniRef50_C7M0M6 Putative DNA-directed DNA polymerase n=1 Tax=Aci... 64 1e-08 UniRef50_B3R9B4 Required for the error-prone processing of DNA l... 63 2e-08 UniRef50_B0KIZ4 Putative uncharacterized protein n=1 Tax=Pseudom... 62 4e-08 UniRef50_B8KRW4 Putative uncharacterized protein n=1 Tax=gamma p... 62 4e-08 UniRef50_D0AI08 UvrA protein (Fragment) n=3 Tax=Enterococcus fae... 62 5e-08 UniRef50_B4SMM0 Nucleotidyltransferase/DNA polymerase involved i... 61 7e-08 UniRef50_Q7MLY1 Uncharacterized protein conserved in bacteria n=... 61 7e-08 UniRef50_D0SUP5 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 61 9e-08 UniRef50_UPI0001BC2B48 hypothetical protein BlinB_00220 n=1 Tax=... 60 2e-07 UniRef50_UPI0001C37F78 hypothetical protein RflaF_16051 n=1 Tax=... 60 2e-07 UniRef50_Q6MQS5 Putative uncharacterized protein n=1 Tax=Bdellov... 60 2e-07 UniRef50_B4UDR0 Putative uncharacterized protein n=1 Tax=Anaerom... 59 2e-07 UniRef50_Q5JTF2 Polymerase (DNA directed), eta (Fragment) n=5 Ta... 59 2e-07 UniRef50_UPI0001693F66 DNA polymerase IV n=2 Tax=Paenibacillus l... 59 3e-07 UniRef50_Q01QX1 Nucleotidyltransferase/DNA polymerase involved i... 59 3e-07 UniRef50_B9QVQ0 Putative uncharacterized protein n=1 Tax=Labrenz... 58 6e-07 UniRef50_B5JUJ6 Putative uncharacterized protein n=1 Tax=gamma p... 58 8e-07 UniRef50_C1AAH6 Putative uncharacterized protein n=1 Tax=Gemmati... 58 8e-07 UniRef50_B9ZJT1 Putative uncharacterized protein n=1 Tax=Thioalk... 57 1e-06 UniRef50_Q6F8Y8 Fragment of component of DNA polymerase V (UmuC)... 57 1e-06 UniRef50_A1S6R3 Putative uncharacterized protein n=1 Tax=Shewane... 57 1e-06 UniRef50_Q1N4J7 Putative uncharacterized protein n=1 Tax=Bermane... 57 2e-06 UniRef50_B8K9K1 Nucleotidyltransferase/DNA polymerase involved i... 56 3e-06 UniRef50_C1RL95 Putative uncharacterized protein n=1 Tax=Cellulo... 55 4e-06 UniRef50_A9AEV1 Nucleotidyltransferase/DNA polymerase n=45 Tax=c... 55 7e-06 UniRef50_C5BND7 Putative uncharacterized protein n=1 Tax=Teredin... 55 7e-06 UniRef50_Q15ZX1 Putative uncharacterized protein n=1 Tax=Pseudoa... 54 1e-05 UniRef50_B8IQT5 Putative uncharacterized protein n=1 Tax=Methylo... 53 2e-05 UniRef50_B9K728 Nuclease (RecB family)-like protein n=1 Tax=Ther... 53 2e-05 UniRef50_UPI0001903F04 DNA polymerase IV n=1 Tax=Rhizobium etli ... 52 3e-05 UniRef50_C2FQ54 Putative uncharacterized protein n=1 Tax=Lactoba... 52 3e-05 UniRef50_Q3SEZ7 Putative uncharacterized protein n=1 Tax=Thiobac... 52 5e-05 UniRef50_C9M121 ImpB/MucB/SamB family protein n=1 Tax=Lactobacil... 51 8e-05 UniRef50_UPI000180D06C PREDICTED: similar to REV1-like n=1 Tax=C... 50 1e-04 UniRef50_Q1CC71 Error-prone repair protein UmuC n=9 Tax=Yersinia... 50 2e-04 UniRef50_A7NMG2 Putative uncharacterized protein n=1 Tax=Roseifl... 50 2e-04 UniRef50_B0TUJ6 Putative uncharacterized protein n=1 Tax=Shewane... 50 2e-04 UniRef50_A5UTK6 Putative uncharacterized protein n=1 Tax=Roseifl... 48 5e-04 UniRef50_A1RYZ3 Rad51-like protein n=1 Tax=Thermofilum pendens H... 48 8e-04 UniRef50_A1WXU5 Putative uncharacterized protein n=1 Tax=Halorho... 48 9e-04 UniRef50_D1REI8 Putative uncharacterized protein n=1 Tax=Legione... 47 0.001 UniRef50_Q14N06 Hypothetical transmembrane protein n=1 Tax=Spiro... 47 0.001 UniRef50_A3WNS1 DinP DNA polymerase-like protein n=1 Tax=Idiomar... 47 0.001 UniRef50_Q5P4A3 Putative uncharacterized protein n=1 Tax=Aromato... 47 0.001 UniRef50_Q2IIA1 Putative uncharacterized protein n=1 Tax=Anaerom... 47 0.002 UniRef50_Q14N05 Putative uncharacterized protein n=1 Tax=Spiropl... 46 0.003 UniRef50_C7P121 Putative uncharacterized protein n=1 Tax=Halomic... 45 0.003 UniRef50_B1XYC2 Putative uncharacterized protein n=1 Tax=Leptoth... 45 0.004 UniRef50_C9Y7V7 Putative uncharacterized protein n=1 Tax=Curviba... 45 0.004 UniRef50_C7RN50 Putative uncharacterized protein n=1 Tax=Candida... 45 0.004 UniRef50_C1RL94 Putative uncharacterized protein n=1 Tax=Cellulo... 45 0.004 UniRef50_D2C795 RecB family nuclease, putative n=5 Tax=Thermotog... 45 0.004 UniRef50_Q5JET4 Pko radA intein n=2 Tax=Euryarchaeota RepID=RADA... 45 0.004 UniRef50_D2RPZ6 Putative uncharacterized protein n=1 Tax=Haloter... 45 0.005 UniRef50_UPI000197AD37 hypothetical protein BACCOPRO_01772 n=1 T... 45 0.005 UniRef50_C4ZK47 Putative uncharacterized protein n=1 Tax=Thauera... 45 0.005 UniRef50_C3DBT0 DNA-damage repair protein n=1 Tax=Bacillus thuri... 45 0.005 UniRef50_A4X7V6 Putative uncharacterized protein n=2 Tax=Salinis... 45 0.007 UniRef50_A4WN87 DNA repair and recombination protein radA n=17 T... 45 0.007 UniRef50_Q12AY4 Putative uncharacterized protein n=1 Tax=Polarom... 45 0.007 UniRef50_C5CQX8 Putative uncharacterized protein n=1 Tax=Variovo... 45 0.007 UniRef50_C6NX90 Putative uncharacterized protein n=1 Tax=Acidith... 45 0.007 UniRef50_D0I998 Regulatory component of sensory transduction sys... 44 0.008 UniRef50_Q1AW94 ATP-dependent DNA helicase RecG n=1 Tax=Rubrobac... 44 0.009 UniRef50_C5A7K1 Glycosyl hydrolase family 57, possibly alpha-amy... 44 0.010 UniRef50_B0MIB9 Putative uncharacterized protein n=1 Tax=Anaeros... 44 0.010 UniRef50_A9VKY6 YolD-like protein n=33 Tax=Bacillus cereus group... 44 0.012 UniRef50_Q5D892 Meiotic recombination protein MER3 n=4 Tax=Embry... 44 0.012 UniRef50_A4YMQ8 Putative uncharacterized protein n=1 Tax=Bradyrh... 44 0.012 UniRef50_C0QGN3 UmuC3 n=1 Tax=Desulfobacterium autotrophicum HRM... 44 0.013 UniRef50_Q97AI2 Putative ski2-type helicase n=2 Tax=Thermoplasma... 44 0.013 UniRef50_C5CKZ3 Putative uncharacterized protein n=1 Tax=Variovo... 44 0.013 UniRef50_D0D245 Putative uncharacterized protein n=1 Tax=Citreic... 44 0.013 UniRef50_Q7UFK0 Putative uncharacterized protein yqjH n=1 Tax=Rh... 44 0.014 UniRef50_UPI000187C717 hypothetical protein MPER_04090 n=1 Tax=M... 44 0.015 UniRef50_A8AB83 DNA repair and recombination protein radA n=16 T... 44 0.016 UniRef50_B0PCE4 Putative uncharacterized protein n=2 Tax=Clostri... 44 0.016 UniRef50_C7NSS7 DNA mismatch repair protein MutS domain protein ... 44 0.017 UniRef50_Q3ITP0 Conserved aromatic amino acid cluster protein n=... 43 0.017 UniRef50_B8GE44 Putative uncharacterized protein n=1 Tax=Methano... 43 0.018 UniRef50_B8FQ20 Putative uncharacterized protein n=2 Tax=Desulfi... 43 0.019 UniRef50_UPI0001B453F1 DNA polymerase IV n=1 Tax=Mycobacterium i... 43 0.020 UniRef50_Q0C405 Putative uncharacterized protein n=1 Tax=Hyphomo... 43 0.021 UniRef50_C7I5M5 Putative uncharacterized protein n=1 Tax=Thiomon... 43 0.023 UniRef50_C1XJF5 Glycosidase n=2 Tax=Meiothermus RepID=C1XJF5_MEIRU 43 0.024 UniRef50_C1V5F2 Putative uncharacterized protein n=1 Tax=Halogeo... 43 0.024 UniRef50_B9LSZ5 Putative uncharacterized protein n=1 Tax=Halorub... 43 0.024 UniRef50_C8SM62 NADH-ubiquinone dehydrogenase subunit n=1 Tax=Me... 43 0.026 UniRef50_C6XNN9 Putative uncharacterized protein n=1 Tax=Hirschi... 43 0.027 UniRef50_C9MQU9 UV-damage repair protein n=1 Tax=Prevotella vero... 43 0.029 UniRef50_UPI000187DC51 hypothetical protein MPER_08778 n=1 Tax=M... 42 0.029 UniRef50_C9D3T2 Helix-hairpin-helix DNA-binding protein, class 1... 42 0.029 UniRef50_Q2JEY1 Putative uncharacterized protein n=1 Tax=Frankia... 42 0.030 UniRef50_C1ZKU0 Putative uncharacterized protein n=1 Tax=Plancto... 42 0.030 UniRef50_Q1GHZ0 Putative uncharacterized protein n=2 Tax=Rhodoba... 42 0.031 UniRef50_O58001 Pho radA intein n=30 Tax=Archaea RepID=RADA_PYRHO 42 0.031 UniRef50_D0D634 Putative uncharacterized protein n=1 Tax=Citreic... 42 0.034 UniRef50_C8WW85 ATP-dependent DNA helicase RecG n=2 Tax=Alicyclo... 42 0.035 UniRef50_A8LST4 Putative uncharacterized protein n=1 Tax=Dinoros... 42 0.035 UniRef50_Q2YI94 Putative uncharacterized protein n=4 Tax=root Re... 42 0.041 UniRef50_Q0AWE0 Putative uncharacterized protein n=1 Tax=Syntrop... 42 0.042 UniRef50_D1S2J3 Putative uncharacterized protein n=1 Tax=Micromo... 42 0.043 UniRef50_D1IND7 Whole genome shotgun sequence of line PN40024, s... 42 0.043 UniRef50_C7H691 ATP-dependent DNA helicase RecG n=3 Tax=Ruminoco... 42 0.053 UniRef50_B1GUP4 Putative DNA-damage repair protein n=1 Tax=Geoba... 42 0.057 UniRef50_D0LI39 DEAD/DEAH box helicase domain protein n=1 Tax=Ha... 42 0.061 UniRef50_A3MXS9 Rad51-like protein n=6 Tax=Thermoproteaceae RepI... 42 0.064 UniRef50_B5QRU3 Putative uncharacterized protein n=1 Tax=Lactoba... 41 0.065 UniRef50_D2U3F4 ATP-dependent DNA helicase RecG n=1 Tax=Arsenoph... 41 0.065 UniRef50_A3W2N8 Putative uncharacterized protein n=2 Tax=Roseova... 41 0.069 UniRef50_A2SR54 DNA repair and recombination protein radA n=31 T... 41 0.070 UniRef50_Q6KZ87 Helicase involved in UV-protection n=1 Tax=Picro... 41 0.072 UniRef50_C7TQB5 ATP-dependent DNA helicase (Fragment) n=1 Tax=Ar... 41 0.080 UniRef50_B8IBL2 Molybdenum cofactor biosynthesis protein n=2 Tax... 41 0.086 UniRef50_C6JHL6 Putative uncharacterized protein n=1 Tax=Ruminoc... 41 0.096 >UniRef50_P04152 Protein umuC n=103 Tax=Gammaproteobacteria RepID=UMUC_ECOLI Length = 422 Score = 516 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 422/422 (100%), Positives = 422/422 (100%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD Sbjct: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG Sbjct: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP Sbjct: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF Sbjct: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN Sbjct: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL Sbjct: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR Sbjct: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 Query: 421 VK 422 VK Sbjct: 421 VK 422 >UniRef50_A0L9G4 DNA-directed DNA polymerase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9G4_MAGSM Length = 421 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 197/421 (46%), Positives = 259/421 (61%), Gaps = 3/421 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 +AL D N FYASCE +F+P L GKPVVVLSNNDGC IAR+ EAK LG+ MG P + + L Sbjct: 3 YALVDCNNFYASCERLFQPHLEGKPVVVLSNNDGCAIARSNEAKQLGIAMGAPLHQIQAL 62 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 ++ V FSSNY LY D+S RVM TLE+L+PRVEIYSIDEAF DL G+ + GR Sbjct: 63 IKQHQVALFSSNYPLYGDLSARVMRTLEQLAPRVEIYSIDEAFLDLQGMPAPQR-QILGR 121 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 I V + T + V VGI TKTLAK+AN AKK + GV+DLS+ + RK + LPV Sbjct: 122 TIHQQVKRWTGIPVSVGIGPTKTLAKVANRFAKKSPKT-EGVLDLSDPQWCRKALHQLPV 180 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +VWG+G R +K+L+ GI T L L+ R+ FNVVLERTVRELRGE + Sbjct: 181 GEVWGVGPRWAKRLNQAGIDTALQLSRMPPPLARQQFNVVLERTVRELRGESVIPFAALP 240 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 +Q I +R+FG++I + +++AI S+ RAAEKLR + + FI T+ F+ + Sbjct: 241 AARQSIATTRTFGQKIHTHDEIKEAISSFTVRAAEKLRKQGLLAAALHLFITTNRFSEQD 300 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 Y NS + P D+ ++ A +LDAI++ G+RYQKAGV+L S Q +LF Sbjct: 301 LQYKNSLTWSFQQPQDDTLTLLTGAHAALDAIYRPGYRYQKAGVILLGLVSAQHFQPSLF 360 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG-IQQQWQMKRAMLSPRYTTRSSDLLR 420 P S LM +D LN K GRGT+ F +G + W M++ SP YTTR SDL + Sbjct: 361 APPPRLPNSRALMRTLDGLNQKMGRGTVRFGAEGPPKPSWGMRQLQRSPAYTTRWSDLPQ 420 Query: 421 V 421 V Sbjct: 421 V 421 >UniRef50_A4SWQ9 DNA-directed DNA polymerase n=13 Tax=cellular organisms RepID=A4SWQ9_POLSQ Length = 450 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 189/424 (44%), Positives = 270/424 (63%), Gaps = 4/424 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 FAL DVN FY SCE VF+P L P+VVLSNNDGC +AR+AE KALG+K G PWF+ ++L Sbjct: 28 FALVDVNNFYVSCERVFQPKLEDVPMVVLSNNDGCAVARSAEVKALGIKTGTPWFQMQEL 87 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL-TGVRNCRDLTDFG 120 ++ G+ +SSNY LY DMS+RV+ L +P +E+YSIDE+F + T ++ +D + G Sbjct: 88 AKKHGIQAYSSNYTLYGDMSSRVVEVLRAFTPNLEVYSIDESFLQIETVLKQYQDTVELG 147 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMSA 178 R ++ V T L V VGI +KTLAK ANH AKK Q+ GV D++ E + MS Sbjct: 148 RSMKEKVRDTTGLPVCVGIGASKTLAKFANHLAKKHQQFA-GVCDVNAMPKEEFYQWMSE 206 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 V +VWGIGR+++KKL A I +V DL + +R+ + VV+ER ELRG CL+LE Sbjct: 207 TSVAEVWGIGRQLAKKLKAQNIHSVFDLLQASPQAMRQQYGVVMERLCYELRGVSCLKLE 266 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E AP KQ+II SRSFG+ +T + +++ +AARAAEKLRS++ ++ FI+T+PF Sbjct: 267 EVAPAKQQIIASRSFGKLVTKLEELAESVAMHAARAAEKLRSQNGTTGALTVFIQTNPFK 326 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 NEP + S ++ L P+ ++ + NAA + L I+Q+G RY+KAGV+L + AQ Sbjct: 327 QNEPQHHQSITIPLSDPSDNTLTLTNAALKGLKQIYQSGFRYKKAGVILNLISDKPTAQQ 386 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 +LF+D + S LM +D +N++ G + A G +Q+WQM+ SP YTTR +L Sbjct: 387 SLFEDIETKGKSAHLMKAVDEINSRFGNAAIRSAAMGTKQEWQMRSGNRSPNYTTRWDEL 446 Query: 419 LRVK 422 + Sbjct: 447 PVAR 450 >UniRef50_A1U8F5 DNA-directed DNA polymerase n=6 Tax=Gammaproteobacteria RepID=A1U8F5_MARAV Length = 430 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 211/423 (49%), Positives = 284/423 (67%), Gaps = 4/423 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FALCD+N+FYASCE +F P G+PVVV SNNDGC +AR+ EAKALG+KMG P F+ ++ Sbjct: 8 VFALCDMNSFYASCEQLFNPAFRGRPVVVASNNDGCAVARSPEAKALGIKMGQPIFELRE 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + G++ SSNY LY DMS+R M L E +PRV YSIDEAF DLTG+ + DFG Sbjct: 68 YVEKHGLIVCSSNYALYGDMSHRFMLALAECAPRVMPYSIDEAFLDLTGIDSVVSYLDFG 127 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++ V T L + VGIA + TLAKLANHAAK T GVVDL++ +RQR+LM P Sbjct: 128 HHVKELVRIWTGLPICVGIAPSPTLAKLANHAAK-HYPATRGVVDLTDRDRQRRLMHLTP 186 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL-QLEE 239 V++VWGIGR++SK+LDA+GIKT LDLAD+D ++IR HF+VV+ERTVREL G PC L E Sbjct: 187 VEEVWGIGRKLSKRLDALGIKTALDLADSDPKWIRDHFSVVVERTVRELNGIPCHSDLLE 246 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 AP KQ+I+CS+SFG +TD SM AI ++A+RA+EKLR E++ C +++ F+ TS F Sbjct: 247 VAPAKQQILCSKSFGAPVTDLNSMLAAITAHASRASEKLRRENRDCGYLAAFMSTSRFRT 306 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 +Y N + L PT D+R+I+ A ++W+ G+RY KAG++L DF G Q + Sbjct: 307 -GSHYANQQGITLPFPTSDTREIVRHAVSIARSLWREGYRYNKAGIVLTDFRVPGACQSD 365 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG-IQQQWQMKRAMLSPRYTTRSSDL 418 F + +LM +D +N+ G+ T+ F Q Q WQM+R LSP YTTR +D+ Sbjct: 366 FFSQVEDDERNRKLMRTLDKINSIAGKNTIQFGRQIHKNQSWQMRRENLSPAYTTRWADI 425 Query: 419 LRV 421 Sbjct: 426 PVA 428 >UniRef50_Q5N669 DNA polymerase V n=9 Tax=Bacteria RepID=Q5N669_SYNP6 Length = 418 Score = 453 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 195/421 (46%), Positives = 262/421 (62%), Gaps = 10/421 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE VF P L G+PVVVLSNNDGCVIAR+AEAKALG+ MG P+FK KD Sbjct: 1 MFALIDCNNFYVSCERVFDPKLQGQPVVVLSNNDGCVIARSAEAKALGIPMGIPFFKVKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + FSSNY LY DMS RVM TL L P +E+YSIDEAF D +G + G Sbjct: 61 LISQHQIQVFSSNYALYGDMSQRVMQTLATLCPDLEVYSIDEAFLDFSGFQAQ--PLQQG 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + IR TV Q T + V +GIA TK LAK+AN AK+ GV LS + + ++ LP Sbjct: 119 QLIRQTVGQWTGIPVSIGIAATKVLAKVANKLAKQNG----GVFVLS-PSKVQAVLMTLP 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V++VWGI R ++L A+ I T +L T++ +R+ FN+VLER VRELRGE CL LE Sbjct: 174 VEEVWGISSRWGQRLRALNISTAAELQATNLNLMRQQFNIVLERIVRELRGESCLPLESI 233 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +Q ++ SRSFG+ IT P ++QA+ +Y +RAAE+LRS +++ F++T+ F Sbjct: 234 VNPQQSLVVSRSFGQPITTLPELKQAVATYVSRAAEELRSRQLTTSYLTVFVRTNRFQ-- 291 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E Y +AS LLTPT + ++ A R ++++Q G Y+KAGV+ S Q +L Sbjct: 292 ENYEAPNASQGLLTPTNHTGKLLEIALRCTESLYQPGRAYKKAGVLFQGLGSAQSIQQSL 351 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F++ + LM MD LN + GR +L++ G +Q W M+ SP+YTTR DL Sbjct: 352 FEE-SDSEKGAALMVTMDRLNRRYGRQSLHYGATGTRQPWAMRSDQRSPQYTTRWQDLPE 410 Query: 421 V 421 V Sbjct: 411 V 411 >UniRef50_B7JBK8 UmuC protein n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7JBK8_ACIF2 Length = 427 Score = 451 bits (1161), Expect = e-125, Method: Composition-based stats. Identities = 202/424 (47%), Positives = 257/424 (60%), Gaps = 6/424 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FY SCE VFRPDL G+PVVVLSNNDGCV+AR+AE KALGV MG PWF+ + L Sbjct: 3 IALVDANNFYVSCERVFRPDLEGRPVVVLSNNDGCVVARSAEVKALGVAMGTPWFQLQKL 62 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 RR G++ SSNY LYADMSNR+M L SP E+YSIDE F DL+G R L+ G+ Sbjct: 63 ARREGIIALSSNYSLYADMSNRMMGILSTFSPIQEVYSIDECFLDLSGFAQDR-LSQLGQ 121 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMSAL 179 R V Q L VGVGIA TKTLAKLANH AKK GV QR L+ L Sbjct: 122 AARQRVRQWVGLPVGVGIAATKTLAKLANHVAKKRPEYA-GVCVWDDLPEGDQRHLLQQL 180 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +VWG+GR+ + +L GI+TV DL D +RK F++++ER++RELRGEPC+ + E Sbjct: 181 PVSEVWGVGRQWTTRLQETGIQTVWDLRQADPALMRKRFSILMERSIRELRGEPCIAMVE 240 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P +QEI SRSFG +T + +AI Y RA KLR + + FI TSPF Sbjct: 241 IPPPRQEIQSSRSFGRPVTSAEELGEAISLYTVRAVYKLRRQGSVAGALRVFIHTSPFQA 300 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 P Y + +V L P+QD+R + A +L ++++G Y KAGV L + S Q + Sbjct: 301 RLPSYHATRTVALNRPSQDTRVFLQAGRIALADMYRSGFAYAKAGVHLLEITSADALQAD 360 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ--WQMKRAMLSPRYTTRSSD 417 LF + +LMT +D +NA+ G GTL G+Q+ W MKR SP YTTR ++ Sbjct: 361 LFLSAEEEARAHRLMTTLDRVNARFGTGTLQPGVAGLQEPRGWAMKRGNKSPAYTTRWAE 420 Query: 418 LLRV 421 L R Sbjct: 421 LARA 424 >UniRef50_B8FBE8 DNA polymerase IV n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=DPO4_DESAA Length = 396 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 99/400 (24%), Positives = 167/400 (41%), Gaps = 18/400 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AFYAS E + P+L G+ V+V +N G V + + EA+ALGV+ P + Sbjct: 5 LIIHVDMDAFYASVELLDNPELRGQCVIVGGASNRGVVCSASYEARALGVRSAMPIVTAR 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L R V Y ++S +V + +P VE S+DEAF D+T + Sbjct: 65 KLCPRG--VFLPVRRARYQEISRKVFEIFHQYTPLVEPISLDEAFMDVTSSTRLFGSGEE 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 IR + +T GIA+ K +AK+A+ K + + ++ ++ + Sbjct: 123 IAANIRRQIESSLGITASAGIAKNKLVAKIASDLCKPNG------LLVVPADQTQEFLDP 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ +WG+G KL ++G+KT+ D+ + +F E RG +E Sbjct: 177 LPISRLWGVGPASRNKLISLGVKTIRDVRKLTQEMLSANFGRNGEVIYAFARGMDDRPVE 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I +F + + + + R A ++R E R ++ +K + F Sbjct: 237 P-PGAAKSIGREITFDRNVYTLEEAYKWMLFLSERVARRMRKEEATGRTVNIKVKYADF- 294 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-Q 357 + SV L +PT D +I A + L + GV L + G A Q Sbjct: 295 -----IQVTRSVTLESPTDDPGEIYTHAKKLLQKTLVGSKAVRLLGVTLSQLVTPGQAWQ 349 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 LFDD +L +D + + G GT+ A Sbjct: 350 PGLFDDPTASERKRKLNQALDGIWDRFGSGTVEPAALVTD 389 >UniRef50_C0QCD0 UmuC1 n=3 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCD0_DESAH Length = 422 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 177/423 (41%), Positives = 242/423 (57%), Gaps = 6/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FY SCE VF P L GKPV+VLSNNDGC +AR+ EAKALG+ MG P+F+ K Sbjct: 3 VFALVDCNNFYVSCERVFNPQLVGKPVIVLSNNDGCAVARSNEAKALGIAMGAPFFQIKA 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + GV FSSNY LY DMSNRVM TL +P +EIYSIDEAF DLT DL ++ Sbjct: 63 IVEGNGVRVFSSNYPLYGDMSNRVMQTLAPFTPAMEIYSIDEAFLDLTNF-AFTDLVNYA 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R++R TV + T + V +GIA TKTLAK+AN AKK + GV+DL+ + + P Sbjct: 122 RKMRNTVQRNTGIPVSIGIAPTKTLAKIANRIAKKSSKA-DGVLDLTPTSYRDLALEMTP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + DVWGIGRR++ GI+T LD IR + R REL GE C LE+ Sbjct: 181 IGDVWGIGRRLTPFFKYRGIRTALDFKSAAPSLIRGKMGINGIRMQRELAGESCYPLEDC 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ + SRSF T + + QA+ Y +R AEKLR + + ++ ++ T+ F+ Sbjct: 241 PARRKSVAVSRSFKTPATTFDELSQAVSLYISRGAEKLRHQGSFTETLTVYVMTNRFSP- 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + YY NS + L T + + ++I L I+Q+G Y KAG++ G QL+L Sbjct: 300 QSYYYNSKTAVLPTASNSTPELIKQGKGLLKQIFQSGKYYTKAGIVFSSLTRDGQVQLDL 359 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI--QQQWQMKRAMLSPRYTTRSSDL 418 FD R S+ LM MD +NA+ G + +A G+ W+ + SP YTT + L Sbjct: 360 FD-TTDRSRSDNLMQAMDKINARMGSHAVRYAAMGLSGHPSWKGACSHRSPAYTTEWNQL 418 Query: 419 LRV 421 L + Sbjct: 419 LNI 421 >UniRef50_B0VH44 Protein umuC n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH44_9BACT Length = 429 Score = 443 bits (1140), Expect = e-123, Method: Composition-based stats. Identities = 192/422 (45%), Positives = 257/422 (60%), Gaps = 3/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D N FY SCE VF P L KPV VLSNNDGC+++R+ E K L + MG P FK + Sbjct: 11 IVALVDCNNFYVSCERVFNPKLNNKPVAVLSNNDGCIVSRSQEIKDLKIPMGAPGFKYEG 70 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ G SSNY LYADMS+RVM L SP VEIYSIDEAF L G +N RDL +FG Sbjct: 71 LIKKHGGTLLSSNYALYADMSSRVMEVLALFSPEVEIYSIDEAFLGLNGFKN-RDLENFG 129 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++I+ TV Q T + V VGI+QTKTLAK+ANH AK++ G + L + ER K ++ P Sbjct: 130 KKIKRTVFQWTGIPVSVGISQTKTLAKVANHFAKRYSAFQGSLCLLDD-ERITKALAKTP 188 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWGIGR+ K L I+T L L D + +FI + V +TV ELRG C+ L+E Sbjct: 189 VSEVWGIGRQYDKFLRQHKIETALQLRDAEDKFIEHYLTSVGLKTVLELRGYACIDLDEA 248 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I+ SRSFG++++ +++AI Y RAAEKLR + + F+ T+ F Sbjct: 249 PANKKSIVTSRSFGKQVSSLNDLQEAISEYVTRAAEKLRKQKSVAGLLMVFLSTNRFK-E 307 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y NS S L PT + ++I A LD ++ G ++KAGVML D + L+ Sbjct: 308 GPQYNNSLSTTLFPPTAYTPELIKTALNLLDDLYLPGFEFKKAGVMLADIIPEKDVPLSF 367 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 D N ++LM MD LN G+ TL++A GI++ W+MKRA LSP YTT +DL + Sbjct: 368 MDTNYLDDKRKKLMEAMDKLNRTYGQDTLFYASSGIKKDWKMKRAKLSPHYTTHWNDLPK 427 Query: 421 VK 422 VK Sbjct: 428 VK 429 >UniRef50_C0GDP3 DNA-directed DNA polymerase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDP3_9FIRM Length = 395 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 99/408 (24%), Positives = 178/408 (43%), Gaps = 22/408 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D+NAF+ASC P GKP++V + G ++ + EA+ GVK ++ Sbjct: 4 IIHVDMNAFFASCHQAQNPQWQGKPLLVAGDPQKRHGIILTASYEARKFGVKTAMAVWQA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD 118 K L + + S +++LY+ S R+M+ +E+ +P VE +SIDEA+ D+TG T+ Sbjct: 64 KKLCPQG--IYISPDHKLYSAYSKRIMAIMEDYTPLVEPFSIDEAWLDVTGSARLFGTTE 121 Query: 119 -FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 GR ++ +L T + VGI+ K LAK+A+ K + +++ Sbjct: 122 EIGRLLQQRILDETGIPCSVGISGNKFLAKMASERQKPQG------FTILWPRDVPEVLW 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV+++ G+GR+++ L MGI+T+ +LA +R + F V E G + Sbjct: 176 PLPVEEMVGVGRKMAPALHEMGIETIGELAAMPLRLLVSRFGVAGESLHHLANGRDDSPV 235 Query: 238 EEFA-PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + T + + S + I D + + + + + +LR R ++ +K Sbjct: 236 DPTVFDTVKSVGNSLTLPRDINDPEDVARVLLKLSEKVGRRLRQSGNVARTVTLTVKDQN 295 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-QGV 355 F + S L PT + I A ++ + + GV + + G Sbjct: 296 F------VSVTRSRTLHEPTGFTDVIYKTAVDIHQKQFEPWRKVRLLGVSVSNLLPADGG 349 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 QL+LF + E L V D + + G + A +++ K Sbjct: 350 VQLSLFGASE--ERMENLTRVTDRIRDRYGDTVIGRARLCKEKETPPK 395 >UniRef50_D2QVG5 DNA-directed DNA polymerase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVG5_9SPHI Length = 422 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 173/423 (40%), Positives = 246/423 (58%), Gaps = 3/423 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M AL D N FY SCE F P L G+PVVVLSNNDG ++AR+ E K L V MG P+F+ + Sbjct: 1 MIALADCNNFYVSCERSFNPSLNGQPVVVLSNNDGSIVARSNEVKKLNVGMGQPFFEIER 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDF 119 L + G+ FSSNY LY MS RVM+ VE+YSIDEAF DL G + DLT F Sbjct: 61 LRQEHGIHVFSSNYVLYGSMSARVMAIFGRFVEDVEVYSIDEAFFDLNGYESIYPDLTTF 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +R+TV+Q T + + +GIA TKTLAK+AN K Q GV LS E+ R+ + L Sbjct: 121 AHNLRSTVMQWTRIPISIGIAPTKTLAKVAN-WYAKRQPDASGVCMLSTPEQIRQALEQL 179 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 VD++WGIGRR + L GIKT L+ + +++KHF + R V ELRGE C +E Sbjct: 180 SVDELWGIGRRYASFLKQNGIKTALEFSQCHDVWVQKHFTINGLRLVYELRGEVCRTVET 239 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + + SFGE + D P++ +A+ +Y ARA+EKLR + ++ F+ T+ F Sbjct: 240 QPSARKSVCVAPSFGELVGDRPTLYEALTNYVARASEKLRKQRLAAGAMTVFLHTNRFRA 299 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 Y NS S L PT ++ + A ++LD+I+++G+ YQK G++L + Sbjct: 300 AVGQYSNSRSFTLPVPTNLIPELSHYAIKALDSIYKSGYAYQKVGLILSALQPDTHQTPD 359 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 +F + P +L+ ++ LN+K GR + FA QG W+MK+ LSP YTT D++ Sbjct: 360 VF-EGELDPRLLKLLPTVERLNSKLGRDKVRFAAQGFNHLWKMKQRWLSPCYTTHWKDII 418 Query: 420 RVK 422 K Sbjct: 419 ITK 421 >UniRef50_Q0VP68 DNA-damage-inducible protein n=4 Tax=Proteobacteria RepID=Q0VP68_ALCBS Length = 428 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 206/431 (47%), Positives = 276/431 (64%), Gaps = 12/431 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N+FYA+CE +FRPDL G+PVVVLSNNDGC++A +AEAKALGVK G P F+ D Sbjct: 1 MFALVDCNSFYAACERLFRPDLQGRPVVVLSNNDGCIVAGSAEAKALGVKTGMPLFQAHD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L R V FSSNY LY D+S RVM+TLE L+PRVE YSIDEAF D++ + +L Sbjct: 61 LIRGHKVAVFSSNYALYGDISQRVMATLETLAPRVEAYSIDEAFLDVS-LMKTAELQPLA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +IRA + + + V VG+A TK LAKLANHAAK++ TGGVV LS+ R+ KL+S P Sbjct: 120 LQIRARIDRWVGVPVCVGVAPTKVLAKLANHAAKRY-PATGGVVVLSDPLRRDKLLSLTP 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + VWG+GRR+ + +A+GI T LDLA D+ IR+ F+VV ER VREL GEPCL L+ Sbjct: 179 ISQVWGVGRRLRGRFEALGINTALDLARADVGMIRQRFSVVQERLVRELNGEPCLSLDTQ 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +Q++I SRSFGE + P +RQA+ + +RA E LR E Y ++ +++T+P Sbjct: 239 PSPRQQVIYSRSFGEPVAALPPLRQALSDFVSRAMESLRKEGLYAGRVTVYLRTAPMGKP 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + + ++ S L T D+R ++ A L +W G+RY KAGV+L D + Q L Sbjct: 299 QQLFPDTLSAVLSPATADTRLVVRQAQALLAQLWWPGYRYGKAGVILTDLRGRDQVQCGL 358 Query: 361 FDDNAPRPGS-----EQLMTVMDTLNAKEGRGTLYFAGQGIQQQ----WQMKRAMLSPRY 411 F + P E LM VMD++N G G ++ AG+G+Q W M+RA LSP Y Sbjct: 359 FAEQKPAEQETGRRGEALMAVMDSINQS-GVGKVWLAGRGMQGNQHSTWAMRRAHLSPAY 417 Query: 412 TTRSSDLLRVK 422 T+R SDL V+ Sbjct: 418 TSRWSDLPVVR 428 >UniRef50_Q11V03 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=5 Tax=Bacteroidetes RepID=Q11V03_CYTH3 Length = 420 Score = 436 bits (1123), Expect = e-121, Method: Composition-based stats. Identities = 174/422 (41%), Positives = 249/422 (59%), Gaps = 2/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL D N FYASCE VF P L GKP+VVLSNNDGCVIAR+ EAKALG+ MG +F ++ Sbjct: 1 MYALIDCNNFYASCERVFNPSLNGKPIVVLSNNDGCVIARSNEAKALGIDMGGAYFMIEE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 ++ V FSSNY LY DMS RVM+TL E +P +E+YSIDE+F + G DL +G Sbjct: 61 ALKKHNVFVFSSNYTLYGDMSQRVMNTLAEFTPEIEVYSIDESFLNFEGFELLGDLKIYG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR TV + T + V +GIA TK LAKL+N AKK ++ V L + E+ + Sbjct: 121 TTIRNTVFRNTGIPVSIGIAPTKALAKLSNRIAKKN-KEYNHVCVLDSQEKIMAALKITT 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 VD++WGIGR L GI+T D ++RK+ +VV R +EL+GE CL+LE Sbjct: 180 VDNIWGIGRAYHNFLLNHGIQTTYDFVQQPEEWVRKNMSVVGLRLHKELKGEKCLELELV 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A KQ I SRSFG +TD +++A+ ++A+R A KLR + C + + T+ + Sbjct: 240 AMAKQNICTSRSFGRYLTDIDPIKEAMSNFASRCALKLRKDKSVCTLVQILLHTNKHKPD 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 +P Y + + L PT + ++I A+ R+LD +++ G+RY K GV++ + Q NL Sbjct: 300 QPQYFVNKVITLPVPTNSTIELIQASLRALDLVYKPGYRYMKCGVIVSGIVPEDRVQQNL 359 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 FD R ++ T+MD LN G + G+ +QW +K LS Y+TR +++ Sbjct: 360 FDTVD-RSKHNKVTTIMDKLNKSLGADFVKVGSLGVTKQWHLKAEKLSQCYSTRWDEIIV 418 Query: 421 VK 422 +K Sbjct: 419 IK 420 >UniRef50_A1BFA1 DNA-directed DNA polymerase n=7 Tax=Chlorobiaceae RepID=A1BFA1_CHLPD Length = 426 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 174/427 (40%), Positives = 247/427 (57%), Gaps = 9/427 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE VF P L +PVVVLSNNDGC IAR+ EAKA+G+ MGDP +K ++ Sbjct: 1 MFALVDCNNFYVSCERVFNPGLQNRPVVVLSNNDGCFIARSEEAKAIGLAMGDPAYKNRE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L R+ V +S+N+ LY DMS RVM TLE L+P +EIYSIDE F DL G +L D+ Sbjct: 61 LLRQHNVAVYSANFPLYGDMSARVMKTLETLAPDLEIYSIDECFLDLGGFGKF-NLADYA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R TV + T + V +GI TKT+AK AN AKK GGV LS R+ + A+ Sbjct: 120 AATRKTVHRNTGIPVSIGIGATKTIAKAANRMAKKN-LSLGGVCILSTAAATREALGAMA 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ +WGIG + + L I T LD AD +++KH ++ R +EL G CL LE Sbjct: 179 VEHIWGIGSQYAALLHKQHIHTALDFADAPTHWVQKHLHITGARVQQELNGHSCLPLELV 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 KQ I SRSFG ++ Y + AI + + A KLR E ++ F+ TSPF Sbjct: 239 RSRKQSICTSRSFGSLVSSYEEIGYAIAHFTSTCAFKLRREGSRASLLTVFLYTSPFIEK 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA---Q 357 E Y + + L P+ ++ ++ AA L +I+++G+ Y+KAGV++ + A Sbjct: 299 ENRYRGTRTFALPFPSNNTLELQKAAQLLLASIYRSGYGYKKAGVLVSGITDEKGAAMTT 358 Query: 358 LNLFDDNAPRPGSEQ---LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 L+LFD++ ++ LM +D +N++ G+GTL A W+ ++ LSP YTTR Sbjct: 359 LSLFDNDPLPRNQKRDMKLMETLDAINSRFGQGTLRTASD-TNSGWKQRQEKLSPHYTTR 417 Query: 415 SSDLLRV 421 +D++ + Sbjct: 418 WNDIIEI 424 >UniRef50_Q39ZU3 Damage-inducible protein DinP n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q39ZU3_PELCD Length = 399 Score = 434 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 104/407 (25%), Positives = 169/407 (41%), Gaps = 19/407 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AFYAS E + P+L G+PVVV + G V A + EA+ G+ P + Sbjct: 10 IILHLDMDAFYASVEQLDSPELKGQPVVVGGHRSRGVVCACSYEARTFGIHSAMPMSRAL 69 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L + + Y ++S +V + VE S+DEAF D+T R + D Sbjct: 70 RLCPQA--IVQPVRMARYQEISRQVFDIFGRYTDLVEPLSVDEAFLDVTASRRLFGEGWD 127 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +IR V L + GIA K LAKLA+ AK ER + + Sbjct: 128 IAEKIRRDVRDELGLPISAGIAPNKFLAKLASEQAKPDGVFQV-------PERVDDFLLS 180 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ +WG+G + K L MG++TV DL D + + F ER ++ GE +E Sbjct: 181 LPLKRLWGVGPVLLKSLQKMGLRTVADLRHMDRADMERCFGQAGERLIQLAHGEDERPVE 240 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I +F + I + +M A+ R A +LR ++ +K + F+ Sbjct: 241 PQRSL-KSIGHEDTFDQDIFERETMHVALLDLVERVAARLRKHGLIGTTLTLKVKYADFS 299 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S + +RD+++ A + L+ + GV L + Q Sbjct: 300 ------TVTRSRSVADGICHARDMLHLAKQLLEKTEAGKKPVRLLGVSLANLMDADSGQG 353 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 LFD+ R + L MD + + G L A ++ + R Sbjct: 354 LLFDE-DRRNQLKGLEQAMDHVRERYGEKGLCRATLVGHRRRSLTRE 399 >UniRef50_Q5ZUT9 SOS mutagenesis and repair UmuC protein n=12 Tax=Legionellaceae RepID=Q5ZUT9_LEGPH Length = 431 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 204/423 (48%), Positives = 266/423 (62%), Gaps = 9/423 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE +F+P L KP++VLSNNDGCVIAR+ E KALGV+MG P+F K Sbjct: 14 MFALVDCNNFYVSCERLFKPALANKPILVLSNNDGCVIARSNEVKALGVQMGVPYFAVKA 73 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ V FSSNY LYADMS RVMS LE+ P +EIYSIDEAF DL + +F Sbjct: 74 LCKQHKVHVFSSNYTLYADMSRRVMSVLEDNWPAIEIYSIDEAFLDLNTLPQSEH-DEFC 132 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R+++ VL+ T + V +GI TKTLAKLANH AKK R + N+E Q ++ + Sbjct: 133 RKLQKIVLRHTGIPVSIGIGATKTLAKLANHIAKKELRTP-----VFNIENQYHWLAKIV 187 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWGIGR+ KKL GI T DLA D++ I+K F+VVL+RTV ELRG C L++F Sbjct: 188 VGEVWGIGRQWGKKLVQQGIYTAHDLAGMDLQLIKKLFSVVLQRTVLELRGVSCGSLQDF 247 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K II S+SFG T+Y ++ QAI S+ ARA EKLR + +S FIKT+ F L+ Sbjct: 248 ESRK-SIISSKSFGSMQTEYSALAQAISSHCARAWEKLRHQKLMACHLSIFIKTNQFRLD 306 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y + KL+ PT D R +I A L I+++G YQK GV LGD + QL+L Sbjct: 307 LPQYQQTIGFKLINPTDDLRHLIRCAKLCLRKIFRSGFHYQKVGVYLGDLIEKNCLQLDL 366 Query: 361 FDDNAPRP--GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 F+ + + +E+LM+V+D +N K GR TL A +G + W M+ SPRYTT S+L Sbjct: 367 FNQVSEKELNQTERLMSVLDEINTKYGRHTLRLAAEGHVKPWAMRAQSRSPRYTTSWSEL 426 Query: 419 LRV 421 V Sbjct: 427 PVV 429 >UniRef50_Q3ABL2 DNA polymerase IV n=4 Tax=Firmicutes RepID=DPO4_CARHZ Length = 391 Score = 433 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 99/396 (25%), Positives = 167/396 (42%), Gaps = 22/396 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AF+A+ E P+L GKPV+V G V A + EA+ GV+ ++ Sbjct: 5 VIIHVDMDAFFAAVEQRDNPELKGKPVIVGGVPGERGVVAAASYEARKFGVRSAMSLWEA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-T 117 L + N++ Y ++S ++ E +P VE S+DEA+ D+TG + Sbjct: 65 ARLCPHG--IFIPGNHKKYQEVSEKIFRIFREYTPLVEPVSLDEAYLDVTGSQKLFGPGA 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + G++I+ + + T LT VG+A K LAKLA+ K + ++ Sbjct: 123 EIGKKIKKRIFEETELTASVGVAPNKFLAKLASEVNKPDG------FCEVREDNVLDFLA 176 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV+ +WG+G ++ ++L+ MGIKTV D + F+RK F V+ + RG ++ Sbjct: 177 PLPVEMLWGVGEKMKERLNDMGIKTVQDFWELPEFFLRKKFGVLGQNLYYLSRGIDFREV 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + + + +D + + LR E Y IS I+ S F Sbjct: 237 IPERVP-KSLGKEITLQKDSSDVDYLLGKLLGLTMAVGRGLRREGFYAGGISVKIRLSSF 295 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ-GVA 356 + + PT + A R + + GV G Sbjct: 296 ------ITYTRHSRFFEPTWMDDVLYREAKRLFLENYHGELPVRLVGVTATPLVPVGGGR 349 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 Q++LF + E L ++D LN K G T+ A Sbjct: 350 QISLFGE---DLRRENLYPIIDRLNHKYGNKTVTRA 382 >UniRef50_C6CYA7 DNA-directed DNA polymerase n=3 Tax=Bacillales RepID=C6CYA7_PAESJ Length = 422 Score = 432 bits (1113), Expect = e-120, Method: Composition-based stats. Identities = 92/413 (22%), Positives = 163/413 (39%), Gaps = 21/413 (5%) Query: 1 MFALCDVNAFYASCETVFRPD-LWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWF 56 + D+NAFY S P+ GKP V + G ++ + A++ G+K G Sbjct: 14 VILHLDMNAFYCSVHEAEEPEKYKGKPTAVAGSVELRKGIIVTCSYAARSKGIKTGMTVR 73 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + + ++ ++ELY S M E +P VE SIDE + D+TG + Sbjct: 74 QAMRMCP--NLIIIQPDFELYRKYSRGFMKIAREYTPLVEPISIDECYMDITGSKIFGSP 131 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + ++ + + L +G+A K LAK+A+ K + + L ++ Sbjct: 132 LEIAEALQKRIAEEWTLPCSIGVAPNKLLAKMASDMKKPNG------LTVLRLRDVPTIL 185 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 P D + G+G++ + KL+ + I+T+ LA D + + F + G + Sbjct: 186 WDKPCDVLHGLGKKTADKLERLRIRTIGQLAAADEELLIRQFGIYGSWMKSAAHGIDHSE 245 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + I + + +TD + + + A + A +LR + + I+ Sbjct: 246 VRADREQSKSIGHTTTLPYDVTDREDAHRILLNLADQTARRLRRQKLMASTVQITIRKPD 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-- 354 A + S L PT + I + A R D W+ + GV L + ++ Sbjct: 306 MA------TITRSSTLRAPTHSTDMIYHEACRLFDEHWKGSEPARLLGVTLQNLTAEEET 359 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QL+LFD +P E L MD L K G + AG + R Sbjct: 360 AVQLDLFD-YKEQPRKEALTKTMDVLRDKFGENAVLTAGMLGDDPSVLIRNKR 411 >UniRef50_C6M791 Protein UmuC n=2 Tax=Neisseria RepID=C6M791_NEISI Length = 423 Score = 432 bits (1113), Expect = e-120, Method: Composition-based stats. Identities = 180/423 (42%), Positives = 246/423 (58%), Gaps = 9/423 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N+FY SCE VFRP+L PVVVLSNNDGCV+AR+AEAKALG+KMG+P+F+ K Sbjct: 8 MFALIDGNSFYCSCERVFRPELKNVPVVVLSNNDGCVVARSAEAKALGIKMGEPYFRVKH 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + FSSNYELYAD+S R+M T+ P VEIYSIDE F + N D G Sbjct: 68 LVSQGRLKAFSSNYELYADLSRRMMETIAGCVPAVEIYSIDECF---ATMANIGDHAGLG 124 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN--LERQRKLMSA 178 REIR VLQ + VGIA TKTLAK N+ AKK+ GGVV ++ + + + + Sbjct: 125 REIRRRVLQWVGIPTCVGIAPTKTLAKFCNYLAKKYPSHFGGVVVWTDWTESIRLRALRS 184 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 V ++WGIG +I+ KL A GI T LD D +R + V +ERT RE++G C L Sbjct: 185 EAVSEIWGIGNKIAAKLAAQGIFTALDFVLADTATLRLRYGVTIERTQREMQGIVCDGLH 244 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 KQ ++ SRSFG RI +++ AI + + AE LR + +S F+ T F Sbjct: 245 PKPAPKQNLVRSRSFGVRIDTLDALQAAITHHISSGAETLRKDKLTASSVSVFLHTDFFK 304 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 +EP Y NS ++ L+ PT D+ + +AA + L I+++G+ Y+K G+ L Q Sbjct: 305 ESEPQYHNSQTISLIVPTSDTVLLNHAAQKILATIFRSGYLYKKCGIELHGLKPAEQIQA 364 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 +L+ P +M D +N + G+G L A + + W+M R LS YTTR +DL Sbjct: 365 DLWQSVTNNP----VMEAWDKINRQYGKGRLKLASELLANNWEMNRDRLSQCYTTRFTDL 420 Query: 419 LRV 421 V Sbjct: 421 PIV 423 >UniRef50_C8X192 DNA-directed DNA polymerase n=2 Tax=Deltaproteobacteria RepID=C8X192_DESRD Length = 437 Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 178/423 (42%), Positives = 237/423 (56%), Gaps = 5/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D N FY SCE VF P L G+PVVVLSNNDGC+IAR+ EAK LG+ MG+P+ K++ Sbjct: 17 VYALVDCNNFYVSCERVFAPRLQGRPVVVLSNNDGCIIARSEEAKTLGIAMGEPFHKREP 76 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 RR GV FSSNY LY DMS RVM L +P EIYSIDE F + DL Sbjct: 77 FLRREGVNVFSSNYPLYGDMSARVMEALSRFTPHQEIYSIDECFLGFVPAPDA-DLLCTA 135 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R IR TV Q T + V VG+A TKTLAK+AN AKK + V L + + ++ Sbjct: 136 RHIRETVRQWTGIPVSVGLAPTKTLAKIANRCAKKD-PASKNVCLLGDTTTIEQTLARTD 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+D+WGIGRR ++ L G+ T LDL ++R H VV +TV EL +PC LE Sbjct: 195 VEDIWGIGRRYARFLHTRGVDTGLDLVRMPRDWVRNHLTVVGLQTVLELDRQPCFVLETT 254 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I+CSRSFG RI D ++ +A+ + RAAE+LR++ + ++T+ F Sbjct: 255 PAPAKSIVCSRSFGRRIRDKQALGEALARHIQRAAERLRAKGLLAHTVRVALETNRFQP- 313 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y LL PT + + AA LD ++++G YQK GV L + Q +L Sbjct: 314 GPQYAARRCQTLLHPTDATPALHKAAQGLLDVLYRSGFAYQKIGVTLLELVPHNHRQASL 373 Query: 361 FDDNAPR-PGSEQLMTVMDTLNAKEGRGTLYFAGQGI-QQQWQMKRAMLSPRYTTRSSDL 418 F A LM +D LN GR T+ +A G+ QQW M++ +SPRYTT +L Sbjct: 374 FPPAAAETGRQRDLMRTVDHLNTVYGRDTVTWAASGLGPQQWHMRQNHVSPRYTTAWDEL 433 Query: 419 LRV 421 V Sbjct: 434 PCV 436 >UniRef50_Q0AX85 DNA-directed DNA polymerase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AX85_SYNWW Length = 393 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 103/402 (25%), Positives = 166/402 (41%), Gaps = 21/402 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 CD++AF+AS E + P L GKPVVV + + G V + EA+ G++ P + Sbjct: 7 ILHCDLDAFFASVEQLDNPSLRGKPVVVGGSMHSRGVVSTCSYEARKFGIRSAMPIAQAY 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L + V N Y ++S +V S L SP EI SIDEAF D++G + Sbjct: 67 RLCPQA--VFLPVNMPRYLEISKQVFSILSRYSPIKEIISIDEAFLDISGCSSLYGSPEK 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 G I V LT+ VGI+ K LAKLA+ K + + +L+ Sbjct: 125 IGCLINEQVYSELGLTISVGISYNKFLAKLASDMDKPNG------LRIITESEALELLRP 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV +WGIG++ + LD +GIKT+ D+ D+ ++ G +E Sbjct: 179 LPVSRIWGIGQKTEQSLDKLGIKTIGDIQDSPPEWLEDKIGSAGRLFWELAHGIDRRAVE 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F E I D + + I +AA KLR E + I+ ++ S F Sbjct: 239 PEH-ERKSLGREETFPEDINDTAYLEKLIVQFAAELCRKLRQEALFAATITIKLRYSNFK 297 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV-AQ 357 + S + P + A+ L + + G+ LG Q Sbjct: 298 ------TITRSKTI-NPCNSDIIVTQIASELLHHSYNNKQPLRLFGLSLGQLSPAASLEQ 350 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +LF + + + +MD + + G G + A + Sbjct: 351 GSLF-EPQSNADYKSIDRLMDEIRDRFGPGAIKRANLLPNKD 391 >UniRef50_Q11QJ9 Nucleotidyltransferase/DNA polymerase involved in DNA repair/SOS mutagenesis and repair n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11QJ9_CYTH3 Length = 419 Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats. Identities = 179/422 (42%), Positives = 248/422 (58%), Gaps = 9/422 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL D N FY SCE VFRPDL +PVVVLSNNDGCVI+R+ EAKA+GVKMG+P+FK K+ Sbjct: 1 MYALIDCNCFYVSCERVFRPDLRQQPVVVLSNNDGCVISRSDEAKAIGVKMGEPFFKMKE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L R V FSSNY LY D+S+RVM TL + P +E+YSIDEAF L DL G Sbjct: 61 LVRNGKVTAFSSNYTLYGDLSDRVMKTLASIVPDIEVYSIDEAFLHLNESHT--DLETLG 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR TV Q T + VGVGIA TKTLAKLAN +KK G V + + ++ ++A Sbjct: 119 HTIRNTVKQHTGIPVGVGIAPTKTLAKLANRLSKK-----TGGVHIIYPDNIQEKLNACA 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + DVWGIGRR +K+L A + T+ + ++R+HF+V+ RT +EL+G PC+ +E+ Sbjct: 174 LQDVWGIGRRNAKRLQANYVDTIEQFVNQREEWVRQHFSVIGLRTYKELKGIPCIDMEDE 233 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I SRSFGE + S+++AI ++AA AEKLR + + + S F Sbjct: 234 LTEKKSICTSRSFGELQNTFASIQEAIATHAASCAEKLRKQKCAAAGMYVSLSKSRFTDQ 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E +KL T ++ +I A++ L+ +++ Y+K GV + D + QLNL Sbjct: 294 EGDKYFGTYIKLPQATNNTATLIQYASKGLELLFKKDVYYKKCGVTVIDIVPEEKIQLNL 353 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ-WQMKRAMLSPRYTTRSSDLL 419 F + L +D LN K G+ L A QG W+++ +SP YTTR ++L Sbjct: 354 F-EPQKNARLHALEDTIDKLNQKLGKNVLRQAIQGNDNNTWKLRCENMSPNYTTRIGEIL 412 Query: 420 RV 421 V Sbjct: 413 VV 414 >UniRef50_A9E9W4 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Kordia algicida OT-1 RepID=A9E9W4_9FLAO Length = 421 Score = 430 bits (1106), Expect = e-119, Method: Composition-based stats. Identities = 176/421 (41%), Positives = 255/421 (60%), Gaps = 4/421 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL DVN Y SCE VF P L GKPVVVLSNNDGCVI+R+ EAK LG+ MG + Sbjct: 1 MYALVDVNNMYCSCERVFNPKLIGKPVVVLSNNDGCVISRSNEAKKLGIPMGAVTHLFEK 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 +F+ V +SSNYELY D+S+R+M L + +P +E+YSIDEAF G + DL D G Sbjct: 61 IFKDHHVQVYSSNYELYGDLSDRLMHVLSKFTPDIEVYSIDEAFLQFKGFEHF-DLNDLG 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 EI+ T+LQ L + +GIA TK LAK+AN AKK+ ++TGGV + + +++K ++ L Sbjct: 120 IEIKETILQYIGLPISIGIAPTKALAKVANRIAKKFDKKTGGVYVMDSEHKRKKALNWLS 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++DVWGIGRR + KL+ GI + AD ++RK F+VV R ++L+G P L LEE Sbjct: 180 IEDVWGIGRRNASKLNRYGITKAIQFADAPDNWVRKEFSVVGLRLKKDLQGIPTLSLEEV 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +K+ I +RSF + + +++ I SY A+EKLR + C I F+ ++ F + Sbjct: 240 -ESKKSIAVTRSFAKTKNNLQDLKEIIASYGCVASEKLRVQKSCCNLIMVFVHSNRFRKD 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y NS VKL T S I A +++ +I++ G+ ++KAG+M+ QLN+ Sbjct: 299 LPQYNNSLVVKLPYSTNSSLIIAKYAKKAIQSIFKKGYEFKKAGIMVMGLVPDNAQQLNM 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F+ QLM+ +D LN+K G+ TL A Q + W M++ LS YTT +D+L Sbjct: 359 FEACNSDHK--QLMSTIDRLNSKYGKNTLNIASQKLDSSWAMRQNNLSQNYTTDFNDILV 416 Query: 421 V 421 + Sbjct: 417 L 417 >UniRef50_C6XDV2 DNA-directed DNA polymerase n=2 Tax=Methylovorus sp. SIP3-4 RepID=C6XDV2_METSD Length = 430 Score = 429 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 201/425 (47%), Positives = 270/425 (63%), Gaps = 7/425 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKAL-GVKMGDPWFKQK 59 +FAL D N+FYASCE VFRPDL GKPVVVLSNNDGCV+A++ EAKAL + M PWF+ + Sbjct: 10 VFALADANSFYASCEKVFRPDLEGKPVVVLSNNDGCVVAQSKEAKALLKLWMCRPWFEIE 69 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 + R GVV FSSNYELYA+MSNR M+TL + SPR E+YSIDE+F ++TG+ +LTD+ Sbjct: 70 EEALRLGVVPFSSNYELYANMSNRFMTTLRQFSPRQEVYSIDESFLEMTGINR--NLTDY 127 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMS 177 G+EI+ TV T L + VG +KTLAKLANH AKK Q Q GV DL+ + ++ Sbjct: 128 GQEIKRTVKDWTGLPICVGFGHSKTLAKLANHCAKK-QPQWEGVCDLTALSERELEAILE 186 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPVD VWG+GRR+ L +G++ VL L D + +R F VVLERTVREL GE +++ Sbjct: 187 QLPVDTVWGVGRRLQASLATVGVENVLRLKRADPKRVRDKFGVVLERTVRELNGEVLIEM 246 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 EE P ++++ SRSFG R+ + +AI +A+ A+++LRS+ Y + FI+ SPF Sbjct: 247 EEMVPEAKQVMSSRSFGARVHQLKDLEEAISYHASNASQRLRSKGLYANAVYIFIQNSPF 306 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 E YYG S +V L PT ++ I AA L I++ G YQKAGVML + Q Sbjct: 307 DKAE-YYGPSCTVALPCPTDNTLQINKAALWLLKRIYRPGIYYQKAGVMLMGLVPKEGQQ 365 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 L + P S+ LM +D +N K +G L A +G+ + W M+R SP YT + Sbjct: 366 QELLGYSEATPKSQALMETLDRINHKYSKGALKVASEGMAKLWAMRRNFKSPNYTGDWEE 425 Query: 418 LLRVK 422 L +VK Sbjct: 426 LGKVK 430 >UniRef50_Q2W5K5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=6 Tax=Proteobacteria RepID=Q2W5K5_MAGSA Length = 425 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 175/424 (41%), Positives = 241/424 (56%), Gaps = 4/424 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D N FY SCE F P L GKPV+V+SNNDGC +AR+AEAKA+GV MG+P FK + Sbjct: 3 VYALVDCNNFYVSCERAFNPALEGKPVIVMSNNDGCAVARSAEAKAIGVGMGEPAFKLRH 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L G++ SSNY LY DMS RVMS L SP EIYSIDE F DL G+ +LT + Sbjct: 63 LVDSHGLIMLSSNYALYGDMSERVMSVLATFSPGAEIYSIDECFLDLDGMP-VDNLTAWS 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS-NLERQRKLMSAL 179 +++RATV + T + V VGI TKTLAKLAN AKK ++ GV+DLS + + Sbjct: 122 QQVRATVRRWTGIPVSVGIGTTKTLAKLANRLAKK-SKKANGVLDLSRDARWIEAALKQT 180 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV DVWGIGR+ + GI+T DL +I+K V RTV ELRG P L+ Sbjct: 181 PVGDVWGIGRQYAALCGVNGIRTAFDLTLQPDGWIKKTMGAVGLRTVMELRGTPVHTLDT 240 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 K CSRSFG +T++ + A+ ++A+RAAEK+R E + F T F Sbjct: 241 APSDKHTTCCSRSFGASVTEFEQVHDAVMTFASRAAEKIRGEGLVSGAVQVFAYTDRFRP 300 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 ++P + ++ ++L PT + II AA + L + W+ G+ Y+KAGV++ D + Sbjct: 301 DQPQFSLNSMIRLSPPTSSTPHIIGAALKGLKSAWRDGYEYKKAGVIMLDLVRPEDIPRD 360 Query: 360 LFDDNAPR-PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 LF LM +D +N K G+G + F W+M+ + +P +TT D+ Sbjct: 361 LFSPPPESGARPTALMAAVDGINGKMGKGAVGFGLVPDDAPWKMRCSNRTPSFTTSWDDI 420 Query: 419 LRVK 422 VK Sbjct: 421 PVVK 424 >UniRef50_A6ET82 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=4 Tax=Bacteroidetes RepID=A6ET82_9BACT Length = 421 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 178/424 (41%), Positives = 258/424 (60%), Gaps = 5/424 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKAL-GVKMGDPWFKQK 59 M AL D N+FYASCE VFRPDLWGKPVVVLSNNDGC+IA N EAKAL + M +P FK K Sbjct: 1 MIALVDCNSFYASCEQVFRPDLWGKPVVVLSNNDGCIIAANREAKALTDIAMFEPVFKIK 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 V FSSNY LY ++S RVM+TL SPRVE+YSIDE+F DL G + ++L + Sbjct: 61 KQLIAHNVTLFSSNYTLYGELSQRVMNTLYLFSPRVEVYSIDESFVDLHGFGH-KNLKHY 119 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G I+ T+ + T + GVGIA TK LAKLAN AKK + V + + ++ +++ Sbjct: 120 GNFIKETIFRNTGIPTGVGIAPTKVLAKLANKIAKK-GPEHDHVFVIDSDAKRIEILKTT 178 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + +WGIGR+ +KKL +GI T + + ++RK VV ER RELRGEPC+ + E Sbjct: 179 EIKSIWGIGRQQTKKLKEVGIHTAYQFTEMPLAWVRKEMTVVGERLWRELRGEPCMDMIE 238 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 K+ I ++SFG ++ + +A Y + AE LR++ ++ F+ TS F++ Sbjct: 239 IPKPKKGIGTAKSFGRKLERLDLIEEACAYYISEVAEVLRAQKSCAMYLQVFLNTSSFSV 298 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 N+ Y N +V L PT ++ ++ A + L AI++ G+RY+K GV L + Q N Sbjct: 299 NDKQYRNKQTVTLAIPTNNTFTLVTEARKILKAIYKPGYRYKKVGVNLTGIIPEAYVQGN 358 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ-QQWQMKRAMLSPRYTTRSSDL 418 LF+ ++LM + DTLN K G+G ++ G + ++W++ +A SPR+TT+ S++ Sbjct: 359 LFESP-KTEKHKELMQLFDTLNYKYGKGKVFSGLTGTRMKEWELVKADRSPRFTTQWSEI 417 Query: 419 LRVK 422 L VK Sbjct: 418 LEVK 421 >UniRef50_C3X802 DNA-directed DNA polymerase n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X802_OXAFO Length = 420 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 175/420 (41%), Positives = 258/420 (61%), Gaps = 9/420 (2%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N F+ SCE VFRPDL GKPV+VLS+NDGC IAR+ EAKALG++MG+PWFK KDL Sbjct: 6 ALVDCNNFFVSCERVFRPDLEGKPVIVLSSNDGCAIARSNEAKALGIRMGEPWFKVKDLP 65 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 + VV FSSN+ LY+D+SNRV L + SP E+YS+DE+F DLTG D+ + Sbjct: 66 KYRDVVVFSSNFPLYSDLSNRVKYLLADFSPVQEVYSVDESFLDLTGFD---DVKERMVA 122 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV-VDLSNLERQRKLMSALPV 181 IR TV +R + V VG+ TKTLAKLAN+ AKK R G ++ +++ L+ +P+ Sbjct: 123 IRETVAKRIGIPVCVGVGPTKTLAKLANYVAKKHPRSKGVFHYNVLTEQQKSGLLKQIPI 182 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 D+VWG+GRR+++ L + GI+TV L + DIR +R + VV+ER + ELRG C+ + + + Sbjct: 183 DEVWGVGRRLNRSLISRGIETVYQLREADIRTMRSRYGVVMERLISELRGISCIDMVDVS 242 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 P K++I+ SRSFG IT+ + AI +A + ++LR +H + F+ T F ++ Sbjct: 243 PPKKQILSSRSFGGVITEIDDLENAIAFHATKIGKQLRRQHSIAGMVHVFLMTDRFRKDK 302 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 P Y S+ L+ T + +I A L I++ G+ Y+KAG + + + V ++F Sbjct: 303 PQYHPHVSLPLIDATNSTIEINRYAMMGLHRIFRPGYEYRKAGACVSELSPESVFSPDMF 362 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA-GQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 D P ++M VMD +N + G GTL + + ++W+ K +SPRYTT +L Sbjct: 363 TD----PKRRKIMQVMDEINDRFGNGTLRLSQDDMMHRRWRPKVDRVSPRYTTSWDELAE 418 >UniRef50_B4YK21 TumC n=1 Tax=Tetrathiobacter kashmirensis RepID=B4YK21_9BURK Length = 438 Score = 428 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 191/425 (44%), Positives = 258/425 (60%), Gaps = 9/425 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + L D N FY SCE VFRP L GK ++ LSNNDGCVI+R EAKA+G+KMG PWF+ K L Sbjct: 18 YGLIDGNCFYCSCERVFRPFLKGKALISLSNNDGCVISRTDEAKAMGIKMGQPWFEIKHL 77 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 G++ SSN+ LY DMS+R+MS + SPR EIYSIDE+F D +G+ DL+ + + Sbjct: 78 -EEKGLMALSSNFALYGDMSDRMMSVISRFSPRQEIYSIDESFADFSGIT--EDLSAYSQ 134 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR--KLMSAL 179 +IRA VL+ T + VGI TKTLAKLANH AKK Q GV DL+ L+R + +M + Sbjct: 135 KIRAAVLRETGIPTCVGIGATKTLAKLANHIAKK-QPSWSGVCDLTQLDRYQLADIMKNI 193 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V +VWGIGRRI+K+L+ +GI TV DLA R F++V+ +TV+ELRG + LEE Sbjct: 194 EVGEVWGIGRRIAKRLNELGIYTVFDLARMKPEAARAEFSIVVGKTVQELRGISRIDLEE 253 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 A K++II SRSFG +TD ++ A+ + A A KLR ++ + FI+TSPF Sbjct: 254 VADPKKQIISSRSFGLPMTDLAGLQSALSEFVAIACNKLRGQNSVAASMQIFIRTSPFD- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 YGNS V PT D+ A ++LDAIW+ G +Y+KAGVML D Q Sbjct: 313 KGKQYGNSRLVTPPYPTADNLVFTKHALKALDAIWRPGFKYKKAGVMLMDISPADAVQGE 372 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI--QQQWQMKRAMLSPRYTTRSSD 417 LF QLM +D +NA+ GRG++ G ++ W M++ S YTT + Sbjct: 373 LFPVEPEHGKRAQLMVALDGINARYGRGSVKTGSIGFHDREHWYMRQERKSQGYTTNWDE 432 Query: 418 LLRVK 422 +L + Sbjct: 433 VLIAR 437 >UniRef50_B5JVF1 UmuC protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVF1_9GAMM Length = 420 Score = 427 bits (1098), Expect = e-118, Method: Composition-based stats. Identities = 174/422 (41%), Positives = 257/422 (60%), Gaps = 5/422 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M AL D N FYASCE VFRP L G+P+ VLSNNDGC+IAR+ E KALGV MG P F+ Sbjct: 1 MLALVDCNNFYASCERVFRPKLEGRPIAVLSNNDGCIIARSQETKALGVPMGAPLFQWLP 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + G FS+N+ LY D+SNRVM+ L++ PR+E+YSIDEAF DL+ + +L+DF Sbjct: 61 VLEENGAHIFSANFALYGDLSNRVMAVLKDECPRLEVYSIDEAFLDLS-MVPLCELSDFC 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R +R V + T + V +G+A +KTLAKLANH AKK + G+ + E+ R MS+LP Sbjct: 120 RALREKVRRWTGVPVSIGVAPSKTLAKLANHVAKKH-PSSDGIWLMRGTEKNR--MSSLP 176 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWG+GRR+ + + GI TV L + + + RK +V +ERTVRELRGE C ++ Sbjct: 177 VSEVWGVGRRLGARFEGFGINTVWQLRNAETAWARKVASVNMERTVRELRGERCFDIDST 236 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +Q+I+ SRSFG+ +T + A+ ++A RA EKLR + + I F T+PF + Sbjct: 237 EEPRQQILVSRSFGQMVTSKDELASALSNFAWRAGEKLRRQGARTQSIRLFAHTNPFRKD 296 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y ++ T + A + LD +++ G+ Y+KAGV+L + +G+ Q +L Sbjct: 297 MPRYCGRVRIQFHQATDSPPVLAKAVAQGLDQVYRHGYHYKKAGVVLDELLPRGIVQWSL 356 Query: 361 FDDNAPR-PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 + + R + VMD +N K G G + A QG+ + W+M+++ SP +TT ++L Sbjct: 357 LSEESERCEKKSHIGGVMDAINDKMGTGKIRMASQGLGENWKMQQSRQSPSWTTDWANLK 416 Query: 420 RV 421 + Sbjct: 417 TI 418 >UniRef50_P07375 Protein mucB n=137 Tax=root RepID=MUCB_ECOLX Length = 420 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 232/421 (55%), Positives = 277/421 (65%), Gaps = 4/421 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL DVN YASCE FRPDL + V VLSNNDG ++ARN AK G+KMGDP+FK + Sbjct: 1 MFALIDVNGMYASCEQAFRPDLANRAVAVLSNNDGNIVARNYLAKKAGLKMGDPYFKVRP 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + R + FSSNY LYA MS R + +E L+ VE YSIDE F D G+ L FG Sbjct: 61 IIERHNIAIFSSNYTLYASMSARFAAVVESLASHVEQYSIDELFVDCKGITAAMSLDAFG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R++R V + T L GVGIA+TKTLAKL NHAAK W TGGVV L + R +KLMS LP Sbjct: 121 RQLREEVRRHTTLVCGVGIARTKTLAKLCNHAAKTW-PATGGVVALDDGARLKKLMSILP 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWG+G R K L MGIKTVLDLA D R IRK F VVLERTVRELRGE C LEE Sbjct: 180 VAEVWGVGHRTEKALATMGIKTVLDLARADTRLIRKTFGVVLERTVRELRGEACFSLEEN 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P KQ+I+ SRSFG+R+ M+QA+ +AARAAEKLR+E QYCR IS FI+TSP+++ Sbjct: 240 PPAKQQIVVSRSFGQRVETLTDMQQAVTGFAARAAEKLRNERQYCRVISVFIRTSPYSVR 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + Y N A+ KL TQDSR II AA IW+ Y KAGVML DF + QL+L Sbjct: 300 DTQYANQATEKLTVATQDSRTIIQAAQAL-ARIWREDIAYAKAGVMLADFSGKEA-QLDL 357 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 FD P GSE LM V+D +N + G+ L+FAGQGI + M+R MLSP YTT + Sbjct: 358 FDSATPSAGSEALMAVLDGINRR-GKNQLFFAGQGIDNSFAMRRQMLSPDYTTDWRSIPI 416 Query: 421 V 421 Sbjct: 417 A 417 >UniRef50_C7RB82 DNA-directed DNA polymerase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB82_KANKD Length = 422 Score = 426 bits (1097), Expect = e-118, Method: Composition-based stats. Identities = 169/420 (40%), Positives = 254/420 (60%), Gaps = 6/420 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 +ALCDVN+FY SCE +FRPDL+GKPV+VLSNNDGC+IA + EAKALG+ M P+ + + + Sbjct: 8 YALCDVNSFYVSCERMFRPDLYGKPVIVLSNNDGCIIALSDEAKALGIPMAAPYHEARPI 67 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 ++ V CFSSNY LY D+S R LE+ +V YS+DE+F G +N DLT + Sbjct: 68 IQKHKVTCFSSNYGLYGDISKRFNWILEQHCDQVAPYSVDESFMRFEGFQN--DLTQRAQ 125 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 IR+ + + L V +G+ TKTLAK+ANH AKK + T GVVDLSN ++ + + V Sbjct: 126 AIRSELWRCLSLPVCIGLGPTKTLAKVANHFAKKHKTTTHGVVDLSNPATRKWALKQIAV 185 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +WGIGR++SKKL I T DL + D + +++ F+V +ERT+ ELRG+PCL+ E Sbjct: 186 AKIWGIGRQLSKKLILQDIHTAWDLHNADYKTLQRMFSVNMERTILELRGQPCLKFSELP 245 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 K+ I+ SRSFG+ ++ Y +++A+ + +R EKLR++ I+ F+ Sbjct: 246 EPKKSILNSRSFGKPLSIYSDLKEAVAHHTSRCCEKLRNQSSLASSITVFL-YGQRKELV 304 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 + S +++L PT D+ + A + L I +AG Y+KAG+ML Q ++F Sbjct: 305 YHNRPSVTLQLPEPTDDTSIFLQAVEQGLRHIVKAGESYKKAGIMLNGIVDSHGYQPDIF 364 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 + RP +LM +D +N + G+ T+ F G + W M+ SP YT+R D+L++ Sbjct: 365 EGVPQRP---ELMESLDKINRRYGQDTVKFGSLGFAKNWAMRANSCSPHYTSRWQDILKL 421 >UniRef50_Q48B37 RulB protein n=30 Tax=Pseudomonas RepID=Q48B37_PSE14 Length = 427 Score = 426 bits (1096), Expect = e-118, Method: Composition-based stats. Identities = 202/422 (47%), Positives = 273/422 (64%), Gaps = 4/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +F L D N+FYASCE VFRPDL P+VVLSNNDGCVIAR+ +AK VKMG P+F+ KD Sbjct: 8 VFGLVDCNSFYASCERVFRPDLAKVPIVVLSNNDGCVIARSYDAKPY-VKMGAPYFQIKD 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + RR G+ FSSN+ LY D+S RVM+ +E + P VE+YSIDEAF DL+G+ +LT+ G Sbjct: 67 VLRRHGIQSFSSNFALYGDLSQRVMAIIESMVPAVEVYSIDEAFADLSGMP--GNLTELG 124 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R IR+ V + T + VGVGIA TKTLAKLANH AK+ Q TGGVVD+ + ++ ++ Sbjct: 125 RSIRSKVYRCTGIPVGVGIAPTKTLAKLANHTAKRLQAHTGGVVDICDPVKRDWVLRNTS 184 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWGIGR++ L+ M I + DLA D +RK F+VV+E+T REL G CL+L+E Sbjct: 185 VGEVWGIGRKMKAHLEGMQILSAKDLAMADPWMLRKTFSVVIEKTARELAGTACLELDEV 244 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P +QEI CSR FG+R+T+ +++A+ +Y RA+EKLR++ C+ I I+T F + Sbjct: 245 EPPRQEICCSRMFGKRLTELGPIKEAVATYMMRASEKLRAQGSVCKKIRVSIRTGMFNPD 304 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E Y N A V+L PT D R + AT ++ I++ G RY KA V+L D G +L Sbjct: 305 EAKYANGALVQLPYPTNDVRLMTQYATEAVSRIFRPGFRYSKAEVLLMDICQPGEFTDDL 364 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F N P S++LM +D++N K GRGTL + W M+R +S YTTR L Sbjct: 365 FAVNQPVS-SDRLMAALDSINGKWGRGTLRTGSVPVTPDWGMRREQMSQSYTTRLDQLWV 423 Query: 421 VK 422 VK Sbjct: 424 VK 425 >UniRef50_A5FIG7 DNA-directed DNA polymerase n=10 Tax=cellular organisms RepID=A5FIG7_FLAJ1 Length = 446 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 172/422 (40%), Positives = 255/422 (60%), Gaps = 4/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FYASC+ VF P L KP+V+LSNNDGCVI+R+ EAKALG+ M P FK + Sbjct: 28 MFALVDCNNFYASCQRVFEPHLREKPIVILSNNDGCVISRSDEAKALGIPMAIPAFKYES 87 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 +F+ + +SSNY LY DMSNRVM+ L +P +EIYSIDEAF +G + D+ G Sbjct: 88 VFKEKNIFVYSSNYPLYGDMSNRVMNLLRTYTPEIEIYSIDEAFLKFSGY-DLFDMNTLG 146 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++R V Q T + V +G A TK LAK+AN A+K+ +T V + + E++ K + Sbjct: 147 LKMRKEVTQGTGIPVSIGFASTKALAKMANKIARKFADRTQNVHCIDSEEKRVKALKWSK 206 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++DVWGIGR+ +K+L A I T + ++RK +VV R EL G+P L+LEE Sbjct: 207 IEDVWGIGRKHAKRLKAKKINTAYEFTQLPDAWVRKEMSVVGLRLKHELEGKPTLELEE- 265 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A ++ I +RSF +R T Y + + I ++ A AEKLR ++ +C ++ FI+TS Sbjct: 266 AADRKMIATTRSFEKRYTSYEEISERISTFTASCAEKLRRQNCHCNMVTVFIQTSFIKNE 325 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E +Y S ++ PT + ++ AA + AI++ G+RY+KAGV++ QLNL Sbjct: 326 ESHYSRSITITTDFPTNSTIELNAAAQKGFKAIFKKGYRYKKAGVIVMGLTPNSETQLNL 385 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F+ P + LM+V+D +N G + F Q + +QW+MK+ LSP+++T D++ Sbjct: 386 FE--TSNPKHQPLMSVIDKMNQNYGNNKIKFGVQSLGRQWKMKQNRLSPKFSTSLKDVIT 443 Query: 421 VK 422 VK Sbjct: 444 VK 445 >UniRef50_Q1QXT4 DNA-directed DNA polymerase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXT4_CHRSD Length = 426 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 180/424 (42%), Positives = 243/424 (57%), Gaps = 4/424 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M L D N FY SCE VF+P L G PV V+SNNDGCVIAR+ E KALGV+MG P F+ ++ Sbjct: 1 MIGLVDCNNFYVSCERVFQPRLEGVPVGVMSNNDGCVIARSNELKALGVEMGTPAFELQE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + + SSNYELY DMS RV LEE S VE YSIDE F G Sbjct: 61 WVNQGRIHLLSSNYELYGDMSARVREVLEEFSAGVEPYSIDEMFVRFDGFDAA-TTQALA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R + V Q T + V VG+A T+TLAKLAN AAKK G V +N + R+L+ Sbjct: 120 RTLYRNVRQFTGIPVCVGVAPTRTLAKLANRAAKKLPEYGGTCVMHANGDDTRRLLEHTA 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + D+WG+G+R+ ++L GIKT DL D + IR+ F+V LERTVREL+G PC++L + Sbjct: 180 LGDIWGVGQRLVERLALQGIKTAWDLRQADPKAIRQRFSVTLERTVRELQGTPCIELHDA 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I+ SRSFG D ++ AI +A R AEKLR + + R + F+KT+ + Sbjct: 240 DRPRDRIMTSRSFGRLTGDLGDLQDAIRQHAQRGAEKLRRQDSHARAVLVFLKTNRHRPD 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y S ++L PT DSR I+ AA + L+ I++ G+R+ K GVML D QL+L Sbjct: 300 LPQYSPSIVIELPEPTDDSRPILAAARQGLETIYRRGYRFMKGGVMLLDLVDANREQLSL 359 Query: 361 FDDNA---PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 D R +LM +D LN K G+GT+ W ++ A +PR+TT+ + Sbjct: 360 LDTPEREAQRERDHKLMAALDALNGKMGKGTVRLGVPRQNAAWHLRCAHRTPRWTTQWRE 419 Query: 418 LLRV 421 L R+ Sbjct: 420 LPRI 423 >UniRef50_C8X3R0 DNA-directed DNA polymerase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3R0_DESRD Length = 397 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 94/400 (23%), Positives = 164/400 (41%), Gaps = 21/400 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E P+L G+PV+V G V A + EA+ GV+ P + + L Sbjct: 5 ILHVDMDAFFASIEQQDYPELQGRPVIVGGGERGVVSAASYEARRFGVRSAMPISQARKL 64 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-DFG 120 ++ Y ++S +VM+ L+ SP VE SIDEA+ D+TG + G Sbjct: 65 CPNGN--FCHGRHKRYKELSRQVMTVLDGFSPCVEQASIDEAYLDITGTERLLGPPGEVG 122 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R ++ + RT L+ +GIA K +AK+A+ K G + E+ + + LP Sbjct: 123 RALQQAIRVRTGLSASIGIAPNKFVAKIASDWDKP------GGLTWIRAEQLQTFLDKLP 176 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V + G+G R S L+ +G+++V + F ++ G +++ + Sbjct: 177 VRKLPGVGPRTSALLERLGVESVGAVRRFSEAFWTDRLGEGGKQLWARAHGIDDSEVQPY 236 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + + D + + A R +LR E ++ I+ F Sbjct: 237 HAP-KSCGAEHTLPQDTEDEAILISWLLHEAERIGRELRREVMEAGTVTLKIRYDDFT-- 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QGVAQL 358 + KL PTQ ++D+ +A L + G+ G+ G QL Sbjct: 294 ----TFTRCRKLSPPTQSTQDLYSAGVTLLRQQQLQ-RPVRLVGLSAGNLAPMGSGRRQL 348 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + F+ A L MD + + G ++ A Q Sbjct: 349 SFFE--ADSARRNSLDAAMDAVRERFGGTSVRRAEILRAQ 386 >UniRef50_B9M459 DNA-directed DNA polymerase n=14 Tax=Bacteria RepID=B9M459_GEOSF Length = 420 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 95/400 (23%), Positives = 165/400 (41%), Gaps = 22/400 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVV-LSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAF+AS E P L GKPV V S+ V + EA+A GVK G ++ K Sbjct: 14 IIMHVDMNAFFASVEQQNDPRLRGKPVAVVGSSKRTIVTTCSYEARAFGVKTGMALWEAK 73 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 +V + Y +S+ +M + + +P VE +SIDEAF D++G + + Sbjct: 74 SCCPNLILVVGKNR--EYTRISSLIMKLMYDFTPLVETFSIDEAFLDISGSLSLFGTPEN 131 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++A + + LT +GIA K LAKLA+ K + + M Sbjct: 132 IASLLKARIGDQFGLTCSIGIAPNKLLAKLASDMQKPDG------LTVIKPAEVALTMDR 185 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ D+ GIG++ K L +GI+T DL ++ +R+ F +V E G + Sbjct: 186 TPIRDMCGIGKKTEKSLTMLGIRTCGDLGRFPVKLLRQKFGIVGEALHLMGLGVDDSPVV 245 Query: 239 EFAPT--KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + S + + + + + + A ++R + + ++ + Sbjct: 246 PQEESDLVKSVGHSMTLEKDLEKREDILRYLLQLAEMVGRRMRRYGVAGKTVCLSVRYAD 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + S + L T S +I A LD++ + GV L + Q Sbjct: 306 F-----FTNFSRQLTLPEYTNLSAEIYRGAVTLLDSVELT-QPVRLLGVKLSNLRHQD-E 358 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 QL LF L MD +N++ G ++ + Sbjct: 359 QLPLF---EGERKKAHLAKAMDEVNSRFGEFSVTYGTLLT 395 >UniRef50_C6BW91 DNA-directed DNA polymerase n=4 Tax=Bacteria RepID=C6BW91_DESAD Length = 389 Score = 424 bits (1090), Expect = e-117, Method: Composition-based stats. Identities = 104/402 (25%), Positives = 170/402 (42%), Gaps = 22/402 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + P+L GKPV V S + + A + EA+ GV+ P + Sbjct: 5 IMHIDMDAFFASVEQLDNPELRGKPVGVGSMHERSVLSAASYEARKFGVRSAMPVRQALK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L + + S + Y ++S +VM+ L SP VE SIDEA+ D+TG Sbjct: 65 LCPQ--LQVVSGSRHRYKEISRKVMAALSNYSPIVEQASIDEAYIDITGTEKLFGTPLQI 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R I+A + + T LT VGIA K LAK+A+ K + + E+ + + L Sbjct: 123 ARSIKADIRKATGLTASVGIAPVKFLAKIASDLNKPDG------ISIITAEQVQDFLKTL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV+ + G+G++ +L + GI DL F ++ F + G + E Sbjct: 177 PVEKIPGVGKKALPRLRSYGITYAADLRRYPPEFWKERFGERGLVLYEKGAGIDPTPVTE 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + +FGE ++D +++ + + R A +R R ++ +K F Sbjct: 237 G-GAMKSSSAENTFGEDVSDIHTLKTLLLKQSERIAADIRKHGVKGRTVTLKVKFPDFR- 294 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S L + T + I A LDA G + GV + +F + QL+ Sbjct: 295 -----QITRSRTLDSRTSHAGTIYKTACSLLDAELPIG-PIRLIGVGISNFEERN-RQLS 347 Query: 360 LFDDNAP---RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 L DD EQL +D + K G+ L + Sbjct: 348 LLDDPEKPKESKRLEQLDKAVDQVRLKFGKDILTRGRLLEDE 389 >UniRef50_C0VGI8 Nucleotidyltransferase/DNA polymerase n=4 Tax=Acinetobacter RepID=C0VGI8_9GAMM Length = 432 Score = 423 bits (1089), Expect = e-117, Method: Composition-based stats. Identities = 170/427 (39%), Positives = 249/427 (58%), Gaps = 8/427 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL DVN Y SCE VF P L +PVVVLSNNDGCV++R+ EAK LG++M P+F+ ++ Sbjct: 7 IFALVDVNNAYVSCERVFNPKLENRPVVVLSNNDGCVVSRSYEAKQLGIRMAVPFFQIEE 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRDLTD 118 + R+ V FSSNY LYA+MS R M+ L E+YSIDE F +LT ++ DL+ Sbjct: 67 IIRQHHVAVFSSNYALYAEMSRRFMNILASFVDPCEQEVYSIDECFLELTAYQHHYDLSK 126 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE--RQRKLM 176 + +I +TV + L +GI +KT AKLANH AK GV + + + L+ Sbjct: 127 YAFQILSTVKKWLGLPCCIGIGYSKTQAKLANHLAKTHASFN-GVCNFVDEDPCIIEDLL 185 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 PV +VWG+GR+I ++L+ M I +V+DL TD + + KHF+VVLE TV+EL+G CL+ Sbjct: 186 MHTPVGEVWGVGRKIRQRLEKMNIYSVMDLLQTDPKRMGKHFSVVLENTVKELQGVACLE 245 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 +E+ +Q+I+ SRSFG+ I D S+ A+ +A RA E+LR + C+ + I+T+ Sbjct: 246 IEDVISDRQQILSSRSFGQPIEDKNSLSGALTEFALRAVERLRKQKLLCKAVGISIRTNR 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + Y + V L+ + D I+ A + LD I+Q GHRY+KA V+L D Q Sbjct: 306 FNKDAYYRPFT-VVYLVDYSDDRLVIMKAVQQGLDRIYQVGHRYKKAEVILLDIIPQHRH 364 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ--GIQQQWQMKRAMLSPRYTTR 414 ++LF + + L D +N + GR + F + W M + SP Y T+ Sbjct: 365 AVDLFYNTEEMLTRQNLSVAFDEINERFGRDVMTFGRLIGPQGRAWGMTQNHKSPSYLTK 424 Query: 415 SSDLLRV 421 D+LRV Sbjct: 425 WEDVLRV 431 >UniRef50_C6BX75 DNA-directed DNA polymerase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BX75_DESAD Length = 423 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 173/423 (40%), Positives = 247/423 (58%), Gaps = 5/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FY SCE +FRP++ +PVVVLSNNDGCVI+R+ EAK +GV MG P +K + Sbjct: 3 IFALVDCNNFYVSCERLFRPEIKHRPVVVLSNNDGCVISRSQEAKDIGVPMGAPAYKYQS 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 F + V FSSNY LY D+S RV +TL L+P +E+YSIDE+F + R+L G Sbjct: 63 FFLQNNVEIFSSNYALYGDLSQRVTATLASLTPDLEVYSIDESFLEFPPCM-LRELPSIG 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +EIR +L+ T + V VG TKTLAK+A+ AKK+ + G L +L+ +P Sbjct: 122 KEIRTRILKWTGIPVSVGFGSTKTLAKVASRFAKKYPQT-EGTFSLCGRNDLDRLLDKVP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V DVWGIGRR K+L A G+ T D +++K+ +V T ELRG PC +L+ Sbjct: 181 VTDVWGIGRRHGKRLIARGVSTARTFKDLPNLWLKKNMSVTGLHTALELRGTPCFELDNS 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I SRSFG +T + +++ +Y ARA EKLR + + ++ T+ F N Sbjct: 241 PKPKKTISSSRSFGRPVTALSDLEESVAAYVARAGEKLREQQSLTNGVMVYLTTNRFN-N 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y NSA+ L T + ++IN + + +I++ G Y+K GV+L D + Q NL Sbjct: 300 LPQYSNSATRMLPIATDYTPELINTGLQCIRSIYKEGFSYKKTGVVLLDLCGKYNRQCNL 359 Query: 361 --FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 D A E +M ++D+ N + GR TL +A +G++Q WQM R SP YTT DL Sbjct: 360 LELDHKAESAKKEAIMNLLDSANTRFGRRTLSYASEGLEQPWQMNRKYKSPSYTTSWDDL 419 Query: 419 LRV 421 ++ Sbjct: 420 PKI 422 >UniRef50_B2A8L2 DNA-directed DNA polymerase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A8L2_NATTJ Length = 408 Score = 423 bits (1088), Expect = e-117, Method: Composition-based stats. Identities = 90/407 (22%), Positives = 170/407 (41%), Gaps = 27/407 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E P+L KPV++ + G V +A+ G+ P ++ + L Sbjct: 16 ILHIDMDAFYASVEKRDNPELEDKPVIIGGSRRGVVSTCCYKARKYGLHSAMPMYRAQRL 75 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFG 120 V + + Y +S + E +P VE S+DEAF D+TG N D + Sbjct: 76 CPHG--VYLRPDMDKYRRVSQEIKKIFLEFTPLVEPLSLDEAFLDVTGSLNLFGDAVNIA 133 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +I+ + + LT +G+A K +AK+A+ K + +++ ++ LP Sbjct: 134 EKIQTQISDQLQLTCSIGVATNKFIAKVASDLKKPAG------LTHVPTGKEQDFLAPLP 187 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADT-----DIRFIRKHFNVVLERTVRELRGEPCL 235 VD +WG+G + + ++ + G T+ +L +I + K FN+ E T+ +G Sbjct: 188 VDKLWGVGEKTTARIKSRGYHTIGELQQMLAKAQNINSLAKSFNIT-EDTLLLAKGYDDR 246 Query: 236 QLEEFAPTKQEIICSRSFGERIT---DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 ++ P + I ++F + +T Y + + ++ + +LR + ++ I Sbjct: 247 EVVPEEPP-KSIGQEKTFAQDLTAGSQYNQLIPHLLKFSEQVGARLRKAGYKGKTVTVKI 305 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDFF 351 + S F + + T ++I A L + + + GV + + Sbjct: 306 RDSRFK------TWTKQKTVPE-TDQDKEIYAHAQELLQNMNLKPSDEIRLLGVTVSNLV 358 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 S QL+L N +QL +D + K G + A Q Sbjct: 359 SSTQQQLSLDMSNEQYEKEQQLQWTLDEMREKFGDDAIRRARLIFPQ 405 >UniRef50_B4WV07 ImpB/MucB/SamB family n=6 Tax=Synechococcus sp. PCC 7335 RepID=B4WV07_9SYNE Length = 425 Score = 422 bits (1086), Expect = e-116, Method: Composition-based stats. Identities = 203/427 (47%), Positives = 274/427 (64%), Gaps = 10/427 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FALCD N FY SCE VFRP+L VLSNNDGC IAR+ + K LGV MG PW K + Sbjct: 3 IFALCDCNQFYVSCERVFRPELETHACGVLSNNDGCFIARSPQLKTLGVPMGGPWHKYRS 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + V FSSNY LY DMS RVM+ L +P +E+YSIDE F L G + DLTD+G Sbjct: 63 LCTQNNVAVFSSNYALYGDMSQRVMACLGTFTPDMEVYSIDEVFLQLDGFAHL-DLTDYG 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R+++ V Q T + +GVGI TKTLAK+AN+ AKK R T GV +L + Q +++ + Sbjct: 122 RQMQRKVHQWTGIPIGVGIGPTKTLAKVANYVAKK--RTTSGVFNLCDRTLQDQVLPTIA 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+D+WGIGRR + KL+A+GIKT DL + R IR+ FNVV ER V ELRG CL LEE Sbjct: 180 VEDIWGIGRRWALKLNAIGIKTAADLRAAEPRTIRQVFNVVAERIVHELRGTACLGLEEI 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P K+ I+CSRSFG+ I++ + +AI +AARAA KLR + C + F++T+ F + Sbjct: 240 QP-KKNIMCSRSFGQMISEKHLLLEAIADHAARAAGKLRGQGSRCGGLQVFLQTNRFRKH 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E Y NS + P++DSR+II+AA + +++ G Y K GVML D Q NL Sbjct: 299 EAQYSNSCTWSFTVPSRDSREIIHAARACMAQLYRPGFEYHKCGVMLVDLAPATTVQGNL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ-----QQWQMKRAMLSPRYTTRS 415 F + S++LM +MD+LNAK GRGT+ FA QG++ + W M++ SPRYTTR Sbjct: 359 FC-STDHEQSDELMALMDSLNAKMGRGTVRFAAQGLEKGKQRKSWGMRQQWRSPRYTTRL 417 Query: 416 SDLLRVK 422 ++++V+ Sbjct: 418 KEIVKVR 424 >UniRef50_A0LG84 DNA-directed DNA polymerase n=4 Tax=Deltaproteobacteria RepID=A0LG84_SYNFM Length = 425 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 101/395 (25%), Positives = 172/395 (43%), Gaps = 19/395 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E RP+ GKPV+V G V A + EA+ GV P F+ K L Sbjct: 37 IMHVDMDAFYASVEQADRPEFKGKPVIVGGARRGVVSAASYEARRFGVHSAMPVFQAKRL 96 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFG 120 G + Y ++S VM L +SP VE SIDEAF D+TG G Sbjct: 97 CP--GGIFLPVRMGRYKEVSKVVMDILCGISPLVEQISIDEAFVDITGTEALHGSPESLG 154 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R +++ + T +T VGIA K +AK+A+ K + + +R ++ LP Sbjct: 155 RRVKSQIRAATRVTCSVGIAPGKFVAKIASDIHKPDG------LTIVEDDRVEAFLAPLP 208 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ + GIG++ S+ L ++G++ + D+ F K + RG + + Sbjct: 209 VERIPGIGKKTSEALRSLGVRAIGDVLRFPASFWVKRLGAWGVKLHERARGVDPAPVIAY 268 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + +F E + D ++ + + + ++LR E R ++ +K + F+ Sbjct: 269 SQA-KSCSAEDTFPEDVDDVETLEKWLFVQSEEVGKELRRESFRGRTVTLKVKFADFS-- 325 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S L T ++ I A+R L A+ + + + GV + + S Q + Sbjct: 326 ----SITRSHTLREATDCTQLIFGTASRLLRAL-KLNRKVRLVGVGVSNL-SAMPEQKPV 379 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 F D + +L MD ++ + G G L Sbjct: 380 FSD-SMLVRQRKLDRAMDRIHERFGHGALRRGRVL 413 >UniRef50_Q818U9 DNA polymerase IV n=137 Tax=Bacillaceae RepID=DPO4_BACCR Length = 415 Score = 420 bits (1080), Expect = e-116, Method: Composition-based stats. Identities = 93/417 (22%), Positives = 172/417 (41%), Gaps = 22/417 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D+N F+AS E P L GKP+ V N G +I + EA+ G++ P ++ Sbjct: 14 VILHVDMNCFFASVEIAHDPSLQGKPLAVAGNEKERKGIIITCSYEAREYGIRTTMPLWE 73 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K L + +V N+ LY + S ++ L + +++ SIDE + D+T Sbjct: 74 AKRLCPQ--LVVRRPNFTLYREASFQMFQVLSRFTEKIQPVSIDEGYLDITDCYALGSPL 131 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + + I+ +L L +GIA LAK A+ K + + +++ Sbjct: 132 EIAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMKKPLG------ITVLRKRDIPEMIW 185 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V+ + GIG + ++KL+ + I T+ LA D IR + +G ++ Sbjct: 186 PLSVEAMHGIGEKTAEKLNEIHIHTIEQLAKGDEHIIRAKIGKHGIDLQKRAKGTDDREV 245 Query: 238 EEFAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + S +F + + + + + + +++L+ I IK Sbjct: 246 DPSQMGQHKSVGNSMTFSKDMDEEKELLDMLERLSKSVSKRLQKRTLVSYNIQIMIKYHD 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF--SQG 354 + S +L + RDI AA+R W G + GV + ++ Sbjct: 306 ------RRTVTRSKQLKNAIWEERDIFQAASRLWKQHWD-GDSVRLLGVTATEIEWKTES 358 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 V QL+LF E L+ V+D +N K G L Q +++Q + + L ++ Sbjct: 359 VKQLDLFS-FEEDAKKEPLLAVIDQINDKYGTPILQRGSQLLRKQEKSFQQKLENKF 414 >UniRef50_Q4FMY4 UmuC n=6 Tax=Bacteria RepID=Q4FMY4_PELUB Length = 426 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 173/421 (41%), Positives = 252/421 (59%), Gaps = 6/421 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N+FY SCE +F P + KPVVVLSNNDGC+IAR+ EAK LG+KMG+P+FK K++ Sbjct: 10 IALVDCNSFYVSCERLFNPKIRNKPVVVLSNNDGCIIARSNEAKFLGIKMGEPYFKAKEI 69 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + V FSSNY LY D+S RVM TL+ +P +EIYS+DEAF DL+ + ++ D G+ Sbjct: 70 ILKNKVYVFSSNYSLYGDLSRRVMRTLKRFNPELEIYSVDEAFLDLSNYPDD-EVEDVGK 128 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 EIR+ +LQ T + +GIA+TKTL+K+ANH AKK + GV +L +E L+ + + Sbjct: 129 EIRSIILQWTGIPTSIGIAKTKTLSKIANHIAKK---KQSGVTNLIGIENIDPLLEKIDI 185 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +DVWG+G++++K GI L + +I+K NV+ RT ELRG PC+ LE Sbjct: 186 NDVWGVGKQMTKFYHQNGIYNAKQLKNMSNTWIKKSSNVLSSRTALELRGIPCIPLETKT 245 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++ + SRSFG R+ + + +A+ SY A+EK+RSE + I+ ++TSPF Sbjct: 246 SKRKSCVVSRSFGTRVEKFQELEEAVASYCLNASEKIRSESLIAKSITVSVRTSPFQNRG 305 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 YY N+ ++ T +S +I+ A +L+ I+ G+RYQKAG+ L S + NLF Sbjct: 306 VYYSNAKTIDFPIATNNSIEIVKTALIALNEIFINGYRYQKAGITLTGLVSSSGS-KNLF 364 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 + LM +D+ N K GR TL A G+ ++W M+R S T L + Sbjct: 365 S-TEKDEKIKGLMRSIDSTNYKYGRSTLSLASAGVNKKWNMRRDHSSKIDTANFHSLPII 423 Query: 422 K 422 K Sbjct: 424 K 424 >UniRef50_C6PAP1 DNA-directed DNA polymerase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PAP1_CLOTS Length = 414 Score = 417 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 98/403 (24%), Positives = 178/403 (44%), Gaps = 21/403 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D+NAFYASCE L GKPVVV + G V+ + EA+ G+K G P ++ Sbjct: 4 ILHIDMNAFYASCEQSKDKSLKGKPVVVAGDPSKRHGIVLTASYEARKYGIKTGMPNWQA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLT 117 + L + +++ Y S ++++ L+E SP VE +SIDEA+ D+TG + Sbjct: 64 RTLC--NDAIFLKPDFDSYIQYSIKMINILKEFSPLVEQFSIDEAWVDVTGCEDLFGSPI 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + +I++ + L +GI++ K +AK+A+ K LE+ + ++ Sbjct: 122 EIAHKIQSRIKDSLDLPCSIGISENKLVAKMASELKKPLGITEL------PLEKIKDMIW 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V+++ IG SKKL + GI T+ DLA+T + F+ F + G + Sbjct: 176 PLDVENLIWIGSARSKKLKSFGINTIGDLANTPMTFLINLFGKPGKDIYYFANGIDLSPV 235 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 +A T + + + TD +++ S + ++R ++ + +S +K + F Sbjct: 236 RPYAITAKSFGNTITLPRDYTDIEDIKRGFLSLSEMVGSRMRKQNFMGKTVSITVKDNNF 295 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-QGVA 356 + S + T + DI NAA + + + + GV + + Sbjct: 296 K------SITRSRTID-YTVLTEDIFNAAMKLFKENYDTNFKIRMLGVSVSNLVKIDENI 348 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 QL LF NA ++L +D + K G ++ ++ Sbjct: 349 QLCLF-QNAKYENLKKLNYAIDMIRDKYGFDSISRGLILTGEK 390 >UniRef50_C7I5S1 DNA-directed DNA polymerase n=2 Tax=Proteobacteria RepID=C7I5S1_THIIN Length = 431 Score = 417 bits (1074), Expect = e-115, Method: Composition-based stats. Identities = 185/432 (42%), Positives = 244/432 (56%), Gaps = 14/432 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FYASCE VF+P+L GKP+VVLSNNDGC IAR+ EAKALGVKMG P F+ Sbjct: 1 MFALIDGNNFYASCECVFQPELRGKPLVVLSNNDGCAIARSDEAKALGVKMGQPIFEVPP 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 RR + S+N+ LY DMS RV++ L E +PRVE YSIDE+F DLTG+ F Sbjct: 61 AVRR-QLAIRSANFTLYGDMSARVLAILREAAPRVESYSIDESFLDLTGILKPGSREAFC 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK---------KWQRQTGGVVDLSNLER 171 RE+R V + T + VGI TKTLAKL NH AK + + + + Sbjct: 120 RELRERVHRWTGIPNCVGIGATKTLAKLGNHVAKSAVRKPGSYPAELGRVADLSALSPQG 179 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 +++A PV ++WG+GRR + KL +M I+T L L D I F VVL RT REL Sbjct: 180 LSAVLAATPVGELWGVGRRWAAKLRSMNIETALQLRDAPRALILDSFGVVLSRTQRELAS 239 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 EPCL LEE P +Q+I+ SRSFGER+ D+ S+ +A ++A RA EKLR+ + F Sbjct: 240 EPCLALEEVEPDRQQIMVSRSFGERVEDHQSIGEAFATFAMRACEKLRARGLVASAVGIF 299 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 T F + + L T DSR ++N + + G+ Y+KAGV L D Sbjct: 300 ANTDHFRPELHQHHPQRTTDLPRATSDSRVVLNTIRQMQRGFLKDGYAYKKAGVWLMDLS 359 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI--QQQWQMKRAMLSP 409 Q +LF G ++LM +D +N + GRGT+ G + QW M++A LS Sbjct: 360 RPDQLQPDLFS--TITIGDDKLMQTLDAINRRYGRGTVGLGATGWRERPQWGMRQATLSS 417 Query: 410 RYTTRSSDLLRV 421 R+TT DL R Sbjct: 418 RFTTSLRDLPRA 429 >UniRef50_Q15TC7 DNA-directed DNA polymerase n=25 Tax=Proteobacteria RepID=Q15TC7_PSEA6 Length = 421 Score = 417 bits (1072), Expect = e-115, Method: Composition-based stats. Identities = 177/427 (41%), Positives = 246/427 (57%), Gaps = 12/427 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGV-KMGDPWFKQK 59 MFALCD N+ YASCE VF P + KPVVVL+NNDGC+ A AK +GV K P+F+ K Sbjct: 1 MFALCDANSMYASCEKVFDPSIRNKPVVVLTNNDGCICAACGIAKRMGVGKKFVPYFQVK 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFC----DLTGVRNCRD 115 GVV SSNYELYAD+S R+M T +P + +YSIDE F D T ++ Sbjct: 61 KELEAAGVVIRSSNYELYADLSQRMMDTCARFAPDINVYSIDECFLYYGKDATAPQD--G 118 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + IR TV + L + VGI T TLAK+ANHAAK GV L N + ++ + Sbjct: 119 WNNLANSIRKTVWREVRLPICVGIGPTPTLAKVANHAAK-NVSGFIGVAVLDNEDARKHV 177 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + L V DVWGIG+R+ KL+A+GI T +LA+ D IRK F++++E TVREL GE Sbjct: 178 LKQLAVTDVWGIGKRLGVKLNALGIHTAWELANRDPSHIRKAFSIIVENTVRELNGEIRH 237 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 E K+EI +RSFG R+TDY +R A+ +A + KLR + ++ F S Sbjct: 238 CWETVRGAKKEIYSTRSFGSRVTDYDELRAALAGHAETVSVKLRKQKSVTSSMTLFATNS 297 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 P N Y S + PT D+R+I++ ++ ++Q G Y K GV L D Q + Sbjct: 298 PHD-NGGYVRRSFFHRFTVPTNDTRNILHVIDSAMSQLFQPGVHYYKCGVGLMDLHEQDL 356 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRS 415 Q +LF+ + LM MD +N++ GR T+ A +G +Q++ MKRA LSP+YTT+ Sbjct: 357 YQYDLFNPSNDNSR---LMACMDNINSRYGRSTVQMAAKGFEQRFSMKRAFLSPQYTTQW 413 Query: 416 SDLLRVK 422 D+ ++K Sbjct: 414 RDIPKIK 420 >UniRef50_A8ZS21 DNA-directed DNA polymerase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS21_DESOH Length = 384 Score = 416 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 98/397 (24%), Positives = 162/397 (40%), Gaps = 20/397 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 M D++AF+AS E + P+ G+ VVV S+ G V A + EA+ GV P + Sbjct: 1 MILHVDMDAFFASVEQLDHPEWRGRAVVVGRSSGRGVVAAASYEARVFGVHSAMPMSRAL 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + E Y ++S RVM L+ +SP VE SIDEA+ D++G Sbjct: 61 KLCPDA--IVAPPRMERYKEVSARVMEILDAVSPLVEQVSIDEAYLDISGCERLHGTPET 118 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 G+ I+ V +T VG+A K LAK+A+ K + + E + + Sbjct: 119 IGKNIKKQVFDTLGITCSVGVAPIKFLAKIASDMNKPDG------LMVILPEAADRFIET 172 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV V G+G K+L MGI+T+ D+ + K R RG ++ Sbjct: 173 LPVHKVPGVGSVTKKQLALMGIETLGDVVRLPDGVLSKKLGKFGRRLKELSRGIDDSRVV 232 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + P + + + + +R + A L+ + R + IK + F+ Sbjct: 233 PWHPA-KSVSEETTLSRDTAEKQELRHHLLRQAGDVCRHLQKLNARARVVFIKIKYADFS 291 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-FSQGVAQ 357 + L P Q S I A+ L+ A + + GV + + + G Q Sbjct: 292 ------QTTRQTTLDAPVQSSDTIYRQASALLEKQTLA-QKVRLIGVGVTELVVTSGGVQ 344 Query: 358 LNLFD-DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 + LFD + EQ+ + ++ K G+ + Sbjct: 345 MELFDGEARRDSRWEQVDRSVSAISEKFGKTMVKRGS 381 >UniRef50_A8ZLK7 DNA polymerase V, putative n=4 Tax=Cyanobacteria RepID=A8ZLK7_ACAM1 Length = 421 Score = 416 bits (1070), Expect = e-115, Method: Composition-based stats. Identities = 178/421 (42%), Positives = 258/421 (61%), Gaps = 6/421 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + LCD N+FYASCE+ P L KPVV+ SNNDG V+ NA+ KALG+ MG P FK + Sbjct: 5 LIGLCDCNSFYASCESALNPSLQHKPVVIASNNDGVVVTANAKGKALGLVMGVPLFKVQA 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ V FSSNY LY D+S+RVM+ LE +P EIYSIDE F + + T + Sbjct: 65 LIKKHDVRVFSSNYALYGDLSSRVMTILETFTPEQEIYSIDECFMRM---PEFAEATTYS 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++R TVLQ T + V +GI+ +KTLAK+ANH AKK Q+Q GGV D+S +++ P Sbjct: 122 HKVRKTVLQWTGIPVSIGISTSKTLAKIANHVAKK-QKQYGGVFDISAARNAEGILATFP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V D+WGIGR+ +K L + GI++ +L D + IRK VV R + ELRG CL LE Sbjct: 181 VADIWGIGRQYNKWLLSQGIESAKELRDANEGLIRKKMGVVGVRMIHELRGISCLPLELV 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A K+E SRSFG+ +T+ +++AI +YA+RAAEKLR + Q + F +TSPF Sbjct: 241 AKPKKETCVSRSFGQPVTELADLQEAIAAYASRAAEKLRHQEQVAEAMVVFARTSPFK-- 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 Y+ SA+V+ T + I+ +A ++ I++ G +QKAGV++ + Q +L Sbjct: 299 SGYFRQSATVQFPIATNYTPTIVESARNAMARIYEPGREFQKAGVLMVGLCPETTIQGHL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 ++ + ++LM++MD +N + GRGTL A G++Q W+M+ SPRYTT ++L Sbjct: 359 WEKDEGWEKRKRLMSIMDEVNDRFGRGTLEIAASGLRQTWRMQSKWRSPRYTTCWAELPV 418 Query: 421 V 421 Sbjct: 419 A 419 >UniRef50_A5Y0S5 UmuC-like protein n=9 Tax=Proteobacteria RepID=A5Y0S5_ACIBA Length = 425 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 186/425 (43%), Positives = 246/425 (57%), Gaps = 10/425 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FY SCE VF+P L GKPV++LSNNDGC +AR+ EAKALG+KMG P FK ++L Sbjct: 5 IALIDGNNFYVSCERVFQPHLLGKPVIILSNNDGCAVARSEEAKALGIKMGAPLFKIREL 64 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + GV SSNY LY DMS RV+ + + SP EIYSIDE F DL+G + + Sbjct: 65 VKEHGVKVLSSNYTLYGDMSRRVVDAVSQFSPHYEIYSIDENFVDLSGFGDRYEA--IAV 122 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 ++RATV Q T + VGIA+TKTLAKLAN AAKK GGV D + + +PV Sbjct: 123 DMRATVRQVTGIPNCVGIAETKTLAKLANFAAKKNPIF-GGVCDFTQPAVLAWCLDRIPV 181 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +VWGIGR+ KL + GI T L D R+ VVLERTV EL+G CL++E+ A Sbjct: 182 AEVWGIGRQTQIKLASQGIATAAQLRDMPRTLARQLGTVVLERTVAELQGIRCLEIEDIA 241 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 P ++ + +RS G + D ++ QA+ ++A+RAAEKLR I+ F T+ F+ N Sbjct: 242 PQRKGMAVTRSAGAPMRDLEAVMQALTAHASRAAEKLRLHGLVAGQITAFFHTNSFSKNA 301 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA-----GHRYQKAGVMLGDFFSQGVA 356 + S +VKL T ++ D++ A R A W G+ Y KAGVML D A Sbjct: 302 AQHSVSRTVKLKPMTNNTFDLVQAVNRCARAGWHPKAHEHGYSYTKAGVMLDDLLKAEDA 361 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSS 416 LFD P +LM MD +N + G+ + QG Q + + K M SPR+TTR S Sbjct: 362 PKMLFDIVQ--PRDARLMEAMDAINDRYGKRKVVIGAQGFQNKHEAKADMRSPRFTTRLS 419 Query: 417 DLLRV 421 DL + Sbjct: 420 DLPVI 424 >UniRef50_C9KLE5 DNA polymerase IV n=2 Tax=Veillonellaceae RepID=C9KLE5_9FIRM Length = 395 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 85/402 (21%), Positives = 163/402 (40%), Gaps = 24/402 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AF+AS E + KP++V + G V + EA+ GV P + + Sbjct: 6 LVMHVDMDAFFASIEQRDHEEYREKPLIVGGLSGRGVVSTCSYEARRFGVHSAMPIVRAR 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L + + +Y Y +S ++ + +P VE SIDEAF DLTG+ Sbjct: 66 RLCPQG--IFVEGDYANYKAVSQQIFAIFARYAPVVEPLSIDEAFLDLTGMELLMESPRA 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + +++A + ++T L VGIA K LAKLA+ K + + + ++ ++ Sbjct: 124 YAEKLKAEIREKTGLVASVGIAPNKFLAKLASDLEKPDG------LVIITEQTKQAVLDP 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE-RTVRELRGEPCLQL 237 LPV +WG+G++ + +L+A+ I+T+ L T + + F + + G + Sbjct: 178 LPVGRIWGVGQKTAARLEALRIRTIGQLRRTPRERLVRAFGAHMADHLLALASGIDTRPV 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + I +F I ++ + + + + + +LR R + ++ F Sbjct: 238 AP-REPAKSIGKEVTFPTDIESAEAVERVLLALSEKVGYRLRRHGCKGRTVQLKLRLGDF 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S L T R+I A A+ + G+ + F + G Sbjct: 297 R------TYTRSRTLAEATCYDREIYETALAFYRALGVK-QGIRLLGISVSGFDTSGAI- 348 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +LF E L +D + + G + A ++ Sbjct: 349 -SLF---HEEARKENLYAAIDAIKKRFGEQGITKAQLLKKRD 386 >UniRef50_B8CWI6 DNA-directed DNA polymerase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWI6_HALOH Length = 385 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 84/399 (21%), Positives = 157/399 (39%), Gaps = 22/399 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFKQ 58 D++AF+AS E + P+ KPV+V N G V + EA+ GVK + Sbjct: 5 IMHVDMDAFFASVEQLDNPEFRRKPVIVGGIDLENRGVVSTASYEARKYGVKSAMSVVEA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLT 117 + L + + Y ++S ++ +P VE SIDEAF DLTG Sbjct: 65 RRLCPEG--IFVKGRHSRYREISEKIFRIFNTYTPLVEKVSIDEAFLDLTGCHRLFGSSV 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + G++I+ + ++ LT +G++ K LAKLA+ K + + K+++ Sbjct: 123 EIGKKIKNKIKEQLGLTASIGLSYNKFLAKLASGMDKPDG------FFIIDDNNVDKILN 176 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V +VWGIG++ + L + GIKTV L ++ + RG + Sbjct: 177 KLCVGEVWGIGKKTEQLLLSKGIKTVGMLRHLSKSDLKGILGKQGLQLYYLARGIDDRHV 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E + + I +F + + D + + + + R A +LR + ++ + Sbjct: 237 EPGSDI-KSISHEETFSDDLIDPDEVMSHLMNMSERVARRLRKNCLKGSTVFIKVRYNN- 294 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + + D+ I + + G+ + + Q Sbjct: 295 -----RVTLTRRTTIKEYVDDTDSIYRTGLLLIKKHNLLSKPIRLLGIGMANLTDNNGIQ 349 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 L+LF D R ++L + +D + + G ++ Sbjct: 350 LSLFTD---RVRKKRLTSTIDKIKDRYGEKSITRGRNLT 385 >UniRef50_D0J481 DNA-directed DNA polymerase n=4 Tax=cellular organisms RepID=D0J481_COMTE Length = 432 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 189/436 (43%), Positives = 260/436 (59%), Gaps = 19/436 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE FRP L G PVVVLSNNDGC I+R+ EAKALGVKMG P+F+ +D Sbjct: 1 MFALIDGNNFYVSCERAFRPALQGIPVVVLSNNDGCAISRSDEAKALGVKMGQPFFQLRD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFC-DLTGVRNCRDLTDF 119 L G+VC S+N+ELY DMS+R+MS L P EIYSIDE+F DL GVR DLT Sbjct: 61 LVEHKGLVCLSANFELYGDMSDRMMSLAAGLGPTQEIYSIDESFIGDLDGVR---DLTRR 117 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK---------KWQRQTGGVVDLSNLE 170 IRA +L+ T + VG+A TKTLAKL NH AK + Q + + Sbjct: 118 AFAIRARILKWTGIPTCVGLAPTKTLAKLCNHVAKDSERKPGSYPAELQRVCNWAELSEQ 177 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 ++ ++ ++WG+GRRIS +L G+ T LDLA R ++VVLERTVREL+ Sbjct: 178 QRTDILGRTAAGEIWGVGRRISVQLAEQGVLTALDLARLPAHAARDGWSVVLERTVRELQ 237 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G C+ LE K++I C+RSFG IT P + +A+ +A RAAEKLR+ + Sbjct: 238 GVSCMSLETAPAAKKQIACTRSFGHPITTLPPLIEAVSEFATRAAEKLRAGGLRAGALHV 297 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 F+ TSPF +Y +A ++L P+ D++ ++NAA L +I+Q G++ KAGVML D Sbjct: 298 FVHTSPFRPGRRFY-ETAVIQLQPPSSDTKALVNAAVHGLRSIYQPGYQLSKAGVMLQDL 356 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ----WQMKRAM 406 V Q +L P +LM MD +N + G+GT++ A G+ +Q W+M++ Sbjct: 357 CPTEVQQGDLLFQ-EPCRDQSKLMEAMDKINKRFGKGTVHVASTGVPEQDESGWRMRQER 415 Query: 407 LSPRYTTRSSDLLRVK 422 +PRYTT+ ++ + Sbjct: 416 RTPRYTTKIDEIPIAR 431 >UniRef50_D1C0B2 DNA-directed DNA polymerase n=2 Tax=Actinomycetales RepID=D1C0B2_XYLCX Length = 430 Score = 413 bits (1062), Expect = e-114, Method: Composition-based stats. Identities = 110/406 (27%), Positives = 171/406 (42%), Gaps = 20/406 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+A CE RP+L G PV+V G V+A EA+ GV+ P L Sbjct: 23 IMHVDMDAFFALCELARRPELRGLPVIVGGRGRGVVLAATYEARVFGVRSAMPMVSAMRL 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDFG 120 + V ++ Y D+S VM+T+ E++P VE SIDEAF D++G R T G Sbjct: 83 CPQA--VIVPPDHRRYTDVSRSVMATMAEITPIVEQISIDEAFLDVSGARRRLGPPTVIG 140 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +RA V +T VGIA+ K LAKLA+ AK L E + LP Sbjct: 141 ARLRAHVQAVHGVTCSVGIAKNKFLAKLASTHAKPDGM------LLVPDEASVPFLRTLP 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 V +WG+G + L GI +V LADTD+R ++ V G + Sbjct: 195 VGALWGVGEKTEAVLARWGITSVAQLADTDVRTLQAAVGVVHGAHLHDLAWGRDPRPVVP 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I +FG D ++ + + A + R + R ++ ++T+ F Sbjct: 255 TERER-SIGNETTFGSDQHDLAAVEARLLELCDKVAARCREQGVVTRTVALKVRTNDFR- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ--GVAQ 357 + S L PT +RD+ A L A+ G + GV + + Q Sbjct: 313 -----TLTRSRTLDGPTDVARDLYRVARELLAAVDLRGLPVRLVGVRAENLQERAGTAQQ 367 Query: 358 LNLFDDNAPRPGSEQ-LMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 L L + + RP + + +D + + G ++ G+ Q Sbjct: 368 LTLDEAASERPQAHREAELALDAVRERFGTRSIGLGAGGVASARQR 413 >UniRef50_A6CAV0 DNA-damage-inducible protein P n=2 Tax=Planctomycetales RepID=A6CAV0_9PLAN Length = 388 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 89/390 (22%), Positives = 165/390 (42%), Gaps = 20/390 (5%) Query: 7 VNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 ++AFYAS E P+L G+P++V + G V A N A+ GV P + L + Sbjct: 1 MDAFYASIEERDHPELQGQPIIVGGRAEHRGVVSAANYPARKFGVHSAMPMKTARQLCPQ 60 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFGREI 123 F YA++S + + +P VE S+DEAF D++G + + + I Sbjct: 61 AH--FFPVRMSDYAEVSQSLQKIFRKYTPLVEPLSLDEAFLDVSGSQLLFGNGREIAASI 118 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 + V L VG+A K LAK+A+ A K + + ++ ++ + LPV Sbjct: 119 KQEVRHSLQLIASVGVAPNKFLAKIASDADKPDG------LVVVEPDKIQEFLDPLPVSR 172 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 VWGIG+ +++ + +GI+T+ + + + + + F +G + Sbjct: 173 VWGIGKMATQRFNRLGIQTISQVRVLEPKILTELFGEQGLHLWNLSQGLDERAVIPERQA 232 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 + I +F + D +R + + +LR + I I+ F+ Sbjct: 233 -KSISRETTFSSDVNDLEILRIILMDLVEDVSRRLRKNKLRGKTIQLKIRYDDFS----- 286 Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDA-IWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 + S+ + PT +R+I +A LD + + + GV + F S Q +LFD Sbjct: 287 -TFTRSITVSQPTDLTREIEQSALLMLDQKLPERPLSIRLIGVGVTGFQSGSQHQKSLFD 345 Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 + + +L V D + ++ G ++ Sbjct: 346 E-EDQQKFSRLDQVKDQIASRFGSNSIIRG 374 >UniRef50_A5CQW8 DNA polymerase IV n=18 Tax=Actinobacteria (class) RepID=A5CQW8_CLAM3 Length = 430 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 109/410 (26%), Positives = 173/410 (42%), Gaps = 23/410 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+A+ E + RP+L G PV+V + G V + EA+ GV+ P + Sbjct: 23 ILHIDMDAFFAAVELLERPELRGTPVIVGGSSGRGVVTSATYEARRFGVRSAMPMAQALR 82 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDF 119 L + V+ + E YA S VM +++P VE SIDEAF D+ G R + Sbjct: 83 LCPQATVI--GGHMEKYAHWSRVVMGIFRDVTPLVEPLSIDEAFLDVAGARGLFGSPAEI 140 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G IR V T LT VG A TK +AKLA+ K + + + AL Sbjct: 141 GAMIRRRVHAETGLTCSVGAASTKFVAKLASTRCKPDG------LLVIPAAETLPFLHAL 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 PV +WG+G+ + L G++TV D+ADT + ++ R G ++ Sbjct: 195 PVGALWGVGKTTEEALLRRGLRTVADIADTPLPALQSMLGESAGARLHDLSWGRDPRRVS 254 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + +F + +TD +R+ + A R AE+LR R +S ++ S F Sbjct: 255 THREE-KSMGHENTFHDDVTDPEIVRRELLGQATRVAERLRRAGLTARTVSLKLRYSDFR 313 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S L PT +R I + + + + G R + GV + Sbjct: 314 ------TITRSRTLSEPTDVARRIYDEIRDVYEQVARPGDRIRLVGVRAEQLDDADNRAV 367 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 L+D G + +D + GRG + A + KRA +S Sbjct: 368 ALWD---ADEGWREAERTVDQAAQRFGRGAIGPASLLRKP--GAKRATVS 412 >UniRef50_D0Z2K2 Error-prone repair protein UmuC n=5 Tax=Photobacterium RepID=D0Z2K2_LISDA Length = 430 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 167/425 (39%), Positives = 239/425 (56%), Gaps = 6/425 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D FY SCE +F P L GKP+VVLSNNDGC +A + +AKALG+ G PWFK + Sbjct: 8 VWALVDAKNFYCSCEQLFDPSLVGKPLVVLSNNDGCCVAISQQAKALGIVRGVPWFKIQR 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + GV SSNY LYADMS R + L SP VE YSIDEAF L G +L D+G Sbjct: 68 EAIQQGVQVRSSNYTLYADMSRRFIEELSRFSPHVEQYSIDEAFIRLDGF-QLNELADYG 126 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 REIR T+L+ L V VGI T TLAKL NHAAK +++Q GV+ + R++ L+ P Sbjct: 127 REIRTTILKNIGLPVRVGIGATPTLAKLGNHAAKVYEKQVRGVIQIDTEHRRQWLLERTP 186 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + D+WGIG + + +L GI+ LA D IR+ +NV L RTV EL+ C+ + Sbjct: 187 IQDIWGIGAKTATRLRTAGIQNGWQLAQQDSIDIRRLWNVTLARTVLELQQISCISPGDV 246 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +++I+ SR+FG+ I + A+ + RA EKLR + + F++T+ Sbjct: 247 EEKRKQILSSRTFGQGINQLDELNAALAFHCQRAGEKLRKQQSQTGVVGVFLRTNKHKSL 306 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QGVAQL 358 P + SA + L++ TQD+ I+ A L+ I++ G+ Y K GV+L QL Sbjct: 307 -PQHHRSAVMPLISATQDTYRILEVAQALLNEIYRGGYEYYKVGVILEQLTDVTDDAIQL 365 Query: 359 NLFDDNAPRP-GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 ++FD +A +LM V D +NA+ + + A W M++A S R+TTR + Sbjct: 366 DMFDSSALYESKRRELMAVADRVNARY-KNGIKPASIISSTNWHMRQAHRSNRWTTRLDE 424 Query: 418 LLRVK 422 L + Sbjct: 425 LPIAR 429 >UniRef50_Q30X29 DNA-directed DNA polymerase n=8 Tax=Proteobacteria RepID=Q30X29_DESDG Length = 492 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 182/441 (41%), Positives = 247/441 (56%), Gaps = 20/441 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D N+FY SCE VFRPDL +PVVVLSNNDGC+IAR+AEAKALG+ MG PWFK + Sbjct: 53 LYALVDCNSFYVSCERVFRPDLVRRPVVVLSNNDGCIIARSAEAKALGIPMGAPWFKVRR 112 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG--VRNCRDLTD 118 GV FSSNY LY DMS+RVM LE P V +YSIDEAF L + Sbjct: 113 HAESAGVTVFSSNYALYGDMSSRVMRVLERFCPDVHVYSIDEAFMRLDSLIMPPGMSPER 172 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK----------KWQRQTGGVVD--- 165 + +R V +RT + V VG+ TKTLAKLAN +K + GV + Sbjct: 173 YAACLRREVYRRTGIPVSVGLGCTKTLAKLANRLSKQQNAGARAMVPAAFRYAGVFNFGA 232 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 +++ + L+ L V DVWG+G R + +L GI+T L D +R++ +V T Sbjct: 233 VTDPDVMDALLETLDVTDVWGVGARHAGRLRTWGIRTARALRDAPDDRVRRYMSVTGLHT 292 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 V ELRG CL L++ P+++ ++ SRSFG +T M +A+ +Y RAAEKLR E Sbjct: 293 VLELRGISCLPLDDAPPSRRSVVSSRSFGTLVTHKEHMLEAVTAYMTRAAEKLRREQLEA 352 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 + I T + P Y +SA V+L PT + +I A L++IW+ G+RYQKAGV Sbjct: 353 HCVGVMISTPRH-GDGPRYADSAQVQLAVPTSHTPQLIVRARALLESIWRDGYRYQKAGV 411 Query: 346 MLGDFFSQGVAQLNLFDDNAPR----PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 ML S Q+++ +LM D +NA+ GRGTL +A G+ + W Sbjct: 412 MLSGLESAVSRQVSMLPALQGTGRGLERGRRLMAAADAVNARFGRGTLEYAAAGLGRPWS 471 Query: 402 MKRAMLSPRYTTRSSDLLRVK 422 MK+ LSPRYT+ L V+ Sbjct: 472 MKQEHLSPRYTSDWKKLPLVR 492 >UniRef50_A4ECH9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECH9_9ACTN Length = 417 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 107/400 (26%), Positives = 178/400 (44%), Gaps = 24/400 (6%) Query: 4 LCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKDL 61 L D++AF+AS E + P+ GKP++V + + G V + EA+ GV P + + L Sbjct: 28 LMDLDAFFASVEMLDHPEWRGKPLIVGGDADSRGVVSTCSYEARRFGVHSAMPSAEARRL 87 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDFG 120 + + +++ Y ++S +VM+ L + +PRVE SIDEAF D+T G D Sbjct: 88 CPQA--IWTHGHFDRYREVSAQVMAILADETPRVERVSIDEAFIDITPGRFAPEDPLQVA 145 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R I V +T +G+ KT+AK+A+ K + + + +++ ++ALP Sbjct: 146 RRISDRV-AALGVTCSIGVGCNKTVAKIASERDKPFG------LTIVRPGTEQRFLAALP 198 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V + GIGR ++L M I T+ +L+ + F V ER + G ++ Sbjct: 199 VSAMSGIGRSAEERLRRMRIYTLGELSRAPESTLASIFGVNGERMRQRALGLEISEVTSL 258 Query: 241 APTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + + R+F + +T+ + AI +LR + ++ +K S Sbjct: 259 DEEREVKSVSNERTFAKDLTERGDIEAAIALLGESVGRRLRRQGLTGATVTLKLKYS--- 315 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 G +A +L PT D + A LD IWQ G + AGV + DF QG Q Sbjct: 316 ---YGSGRTAQRRLPHPTDDENIFVAVALELLDKIWQKGMHVRLAGVGMSDFDHQGGIQT 372 Query: 359 NLFDDNA----PRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 +LF + L +D + K G L F Q Sbjct: 373 DLFCEIDGRGAQSSDRRDLSVAIDAVRDKFGDTALSFGRQ 412 >UniRef50_A9W7Y3 DNA-directed DNA polymerase n=10 Tax=Rhizobiales RepID=A9W7Y3_METEP Length = 478 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 186/426 (43%), Positives = 235/426 (55%), Gaps = 10/426 (2%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N+FY SCE VF L PV+VLSNNDGC IAR EAKALG+KMGDP+FK + L Sbjct: 54 ALIDGNSFYCSCERVFDAKLARVPVIVLSNNDGCAIARTPEAKALGIKMGDPYFKIRGLC 113 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 GV FSSNY LY DMS R+ + + +P VEIYSIDE+F DLT RD R+ Sbjct: 114 EHQGVRVFSSNYTLYGDMSARINAIYRDATPDVEIYSIDESFLDLTAFVR-RDRVALARD 172 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 IRATV T + VGI TKTLAKLANH AK + GV DL+ + L V Sbjct: 173 IRATVRAWTGIPTCVGIGPTKTLAKLANHIAK-TVPELDGVCDLTEPAAYEHWLCRLHVG 231 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 ++WG+GR KL+AMGI TV DL D D R +RK VV ER + ELRG CL L+ Sbjct: 232 ELWGVGRASLPKLEAMGIDTVADLRDIDPRPVRKALTVVGERMIHELRGVSCLGLDLVPA 291 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 ++ +RSF R+T+ + QA+ ++A R EKLR E I+ F TS EP Sbjct: 292 RRKGCAVTRSFSGRVTERAELEQAVAAHAIRLGEKLRREGLGTDHITVFYHTSEHDRGEP 351 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ----AGHRYQKAGVMLGDFFSQGVAQL 358 S V L T D+ +I AA + W+ RY KAGV+ D +Q Sbjct: 352 MRSVSTVVTLPEATNDTLALIPAALHGMARTWREQGNPPWRYSKAGVVTVDLVPLAASQR 411 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ---WQMKRAMLSPRYTTRS 415 L R +++LM +D NA+ GRG++ A G+ QQ W K M +PRYTTR+ Sbjct: 412 ALIGRLD-RERADRLMGALDACNARFGRGSVVPARAGLAQQRRTWTTKFEMRTPRYTTRA 470 Query: 416 SDLLRV 421 +L Sbjct: 471 DELPVA 476 >UniRef50_C0YV48 Probable RumB/ImpB like DNA repair protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YV48_9FLAO Length = 423 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 145/411 (35%), Positives = 229/411 (55%), Gaps = 5/411 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL D N F+ SCE PDL G+PVVVLSNNDGCV++R+ EAK LG+ M P FK K+ Sbjct: 1 MYALVDCNNFFVSCERTLDPDLEGRPVVVLSNNDGCVVSRSKEAKDLGIPMAAPAFKYKE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 LF++ V FS+ +ELY S +V++ + E+YSIDE F DLTG + D+ ++ Sbjct: 61 LFQKHDVKSFSAKFELYNYKSQQVINIAKSYVLDHEVYSIDELFLDLTGFK-YIDIYEYC 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +I+ + + + V +GIA TKTL K+AN K++ GV L E+ K + L Sbjct: 120 LKIKEEIKDKESIPVSIGIAPTKTLCKVANRIVKEFPENFNGVYILDTPEKIEKALKWLN 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + DVWGIGRR++ K++ G+ DL ++RK + R + EL+G L+L+ Sbjct: 180 IGDVWGIGRRLAAKMNDSGVYKAWDLLQKPEMWVRKIMGIHGVRMINELKGIRQLELDA- 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I +RSF + +T+ +R+ + ++ +E+LR ++ C+ I+ F++T+ F + Sbjct: 239 PSPKKSIAVTRSFMQMLTNKEEVRERVETFGMYCSERLRKQNTCCKMITVFVQTNRFRKD 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y N+ + L PT S I +AI++ G Y++AGVM+ DF + Q++L Sbjct: 299 LPEYKNAMTRILSNPTNSSILIGRVVNELFEAIYREGFHYKRAGVMVNDFVPEDQRQISL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 F+++ +M MD +N K G+ + + RA LSP Y Sbjct: 359 FEEDIQNQHL-PVMKAMDAMNRKFGKDKVRLGSMSGDNTFG--RAKLSPEY 406 >UniRef50_P58965 DNA polymerase IV n=29 Tax=Clostridia RepID=DPO4_THETN Length = 384 Score = 410 bits (1055), Expect = e-113, Method: Composition-based stats. Identities = 95/362 (26%), Positives = 163/362 (45%), Gaps = 19/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E P+ GKPV+V + G V + EA+ G+ P + K Sbjct: 5 IIHVDMDAFFASIEQQDNPEYRGKPVIVGGLSGRGVVSTCSYEARKYGIHSAMPMYMAKK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + + Y ++S ++ L +++P VE SIDEA+ D+T V + D Sbjct: 65 LCPQG--IFLPVRRKRYEEVSEQIFRILYDITPFVEPVSIDEAYLDVTHVDK--NPEDIA 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 EI+ V T LTV VGI+ K LAKLA+ K + + + +++ LP Sbjct: 121 LEIKKRVKDATGLTVSVGISYNKFLAKLASDWNKPDG------LMVITEDMVPEILKPLP 174 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V V GIG + ++KL ++GI+TV DL + + F +RG +E Sbjct: 175 VTKVHGIGEKSAEKLRSIGIETVEDLLKLPQENLIELFGKTGVEIYNRIRGIDERPVETM 234 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I ++ + + + Q + ++ +E+L E YCR ++ IKT+ FA++ Sbjct: 235 REI-KSIGKEKTLEKDTKNKELLIQHLKEFSEIVSEELIKERLYCRTVTVKIKTADFAVH 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S + + S DI A L+ W+ + G+ + + QL+ Sbjct: 294 ------TKSKTVDKYIRFSEDIYEVAKGILEE-WKLEQYVRLIGLSVSNLSPVKYEQLSF 346 Query: 361 FD 362 D Sbjct: 347 LD 348 >UniRef50_D1R5W7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5W7_9CHLA Length = 421 Score = 409 bits (1053), Expect = e-113, Method: Composition-based stats. Identities = 161/422 (38%), Positives = 241/422 (57%), Gaps = 7/422 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F L D N FY SCE + P L KPV+VLS NDGCVI+R+ EAK LG+KMG+P+FK K+ Sbjct: 4 FVLADCNNFYVSCERMLHPKLEEKPVIVLSQNDGCVISRSQEAKQLGIKMGEPFFKVKEY 63 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 R V+ +SSNY+LY D+S RVM++L + +P ++IYSIDEAF + ++ Sbjct: 64 CERAKVIVYSSNYQLYGDISERVMNSLSQFAPEMQIYSIDEAFLKFPITLSDEEMFAECM 123 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 I+ + + + + +GIA TKTLAK+AN AK+ + GV L+ + ++ P+ Sbjct: 124 RIKKLIKKWVGIPISIGIAPTKTLAKVANSLAKQN--RDLGVFSLNEPLSREAILKEYPI 181 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +DVWGIGRR+SK+L +GI TV D F+RK VV ER + EL+G L LEE + Sbjct: 182 EDVWGIGRRLSKRLKGIGILTVWDFIQLTPYFVRKTMGVVGERMLLELQGISALDLEESS 241 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 P KQ I SRSFG ++TD + +A+ ++ ++A KLR + QY + +++ F+ + Sbjct: 242 P-KQSITFSRSFGRKVTDISELGEALATFVSKACVKLRKQKQYAAALLVYLQF--FSQDG 298 Query: 302 PYYGNSASV-KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + + +PT D+ ++I A + L ++ +Y+K GV+L D S +L Sbjct: 299 ESLQGNHMIYSFPSPTDDTIEMIAATKQCLTKLYIDKKKYKKCGVILLDLKSAEQFMPDL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F P +Q+M MD LN + + T++ G GI Q W+ + SP TT L Sbjct: 359 F-QKGPDIKRQQVMRAMDKLNTRLKKRTVFLGGTGIHQDWKSRSDQRSPYNTTSWDHLPI 417 Query: 421 VK 422 VK Sbjct: 418 VK 419 >UniRef50_B9Z6P1 DNA-directed DNA polymerase n=2 Tax=Proteobacteria RepID=B9Z6P1_9NEIS Length = 435 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 178/423 (42%), Positives = 248/423 (58%), Gaps = 7/423 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 FA D N FYA+CE VF P L G+PVVVLSNNDGCV++R+AEAK LGV MG P+F K Sbjct: 16 FAQVDCNNFYAACERVFNPALAGRPVVVLSNNDGCVVSRSAEAKRLGVPMGAPYFTLKGQ 75 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 R GV FSSNY LY D+SNR M L + E+YSIDE F DL+G + R Sbjct: 76 LERQGVAVFSSNYALYGDLSNRAMRLLAGYARAQEVYSIDECFLDLSG---EAEPLRLAR 132 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL--MSAL 179 +R +LQ L VG+ +KTLAKLANH AK+ + GV+DL +L+ L + + Sbjct: 133 RLRDALLQGLGLPACVGLGPSKTLAKLANHLAKQ-EAALEGVLDLGSLDATALLQRLEPV 191 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V++VWGIGRR+ ++L GI + LA+T+ ++++ F +V R ELRG CL LE Sbjct: 192 AVEEVWGIGRRLGERLRLAGIGSARQLAETERDWLQRRFGLVTARIADELRGVSCLALES 251 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ ++ +RSFG ++T +++A +A+R AE+LR + F+ I+ S Sbjct: 252 LLEPRRSVMSTRSFGRKVTALAELQEAAAMHASRVAERLRRQGSLAHFLRVGIR-SGVPG 310 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 S +V LL P+ DSR + AA +++ +WQ G RY KAGVM + G Q + Sbjct: 311 WGRGGDASETVALLPPSNDSRVLARAAQQAVARLWQRGVRYHKAGVMAFELVDAGQVQAD 370 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 LF + S +LM MD +N + GRGT+ +G +Q W+MK+ LSP YTTR D+ Sbjct: 371 LFAGDPLDAKSARLMQAMDAINQRMGRGTVRLLAEGTKQPWRMKQDHLSPCYTTRWDDIP 430 Query: 420 RVK 422 VK Sbjct: 431 VVK 433 >UniRef50_D0KZ56 DNA-directed DNA polymerase n=12 Tax=root RepID=D0KZ56_HALNC Length = 439 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 205/424 (48%), Positives = 276/424 (65%), Gaps = 7/424 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FY SCE VF P L +PVVVLSNNDGC +AR+AEAKALG+ MG PWF+ + Sbjct: 17 VFALVDGNNFYVSCERVFNPALEARPVVVLSNNDGCAVARSAEAKALGIAMGQPWFQIQS 76 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + + G++ SSNYELYADMSNR+M L + SPR E+YSIDE F DL G+ DLT Sbjct: 77 MAQSHGLIALSSNYELYADMSNRMMRILADFSPRQEVYSIDECFLDLRGM--DVDLTLLA 134 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER--QRKLMSA 178 +R V Q + VG+GI ++KTLAKLANH AKK Q Q GV DL+ LE Q +LM+ Sbjct: 135 HGMRQRVAQWIGIPVGIGIGESKTLAKLANHLAKK-QPQWQGVCDLTTLEESAQDRLMAC 193 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + V DVWG+GRR+ ++L+A GI T LDL D I++ F+VVL RTVREL+G CL LE Sbjct: 194 VDVGDVWGVGRRLKEQLNARGIVTALDLKRADPVIIQRQFSVVLARTVRELQGISCLPLE 253 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 +Q+II SRSFG+ + P +RQAI ++ +RAAEKLR++ + + FI+TSPF+ Sbjct: 254 SMVAPRQQIIVSRSFGKPVWYLPELRQAITAHMSRAAEKLRTQASVAQMVQVFIRTSPFS 313 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV-AQ 357 P+Y ++ L + D+R ++ A + L I++AG+ YQK GV+L D +G A+ Sbjct: 314 A-RPFYSQGITLPLAAASDDTRLLVKIAQQGLTRIYRAGYDYQKVGVLLMDIQPKGQGAR 372 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 +LF D ++QLM +D++NA+ G+ TL AG+G Q W MKR +P YTT Sbjct: 373 TDLFHDAQHDRRTDQLMQTLDSINARMGKHTLKLAGEGFVQPWAMKRNRHTPAYTTNIRQ 432 Query: 418 LLRV 421 L R Sbjct: 433 LARA 436 >UniRef50_A5GPY7 Bacterial UmuC protein homolog (SOS-regulated protein) n=14 Tax=Cyanobacteria RepID=A5GPY7_SYNR3 Length = 426 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 174/421 (41%), Positives = 249/421 (59%), Gaps = 6/421 (1%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N FYASCE +F P L G+PVVVLSNNDGC++AR+ EA+ LG+ MG P+F+ D Sbjct: 6 ALIDCNNFYASCEQLFDPALQGRPVVVLSNNDGCIVARSREARQLGIAMGTPYFQVADRL 65 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 R VV SSNY LY DMS RVM+ L++ P +E+YSIDEAF L + +L+ + E Sbjct: 66 RDQQVVVRSSNYALYGDMSQRVMALLKQRVPELEVYSIDEAFARLPALPA-HELSSWAAE 124 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +R V Q+ L + +G+A +K LAKLAN AK+ +TG L + + ++ + V+ Sbjct: 125 LRVLVRQQLGLPIALGMAPSKVLAKLANRLAKRDPARTGVCNLLLEPQLPDR-LAEVAVE 183 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 D+WG+GRR+++ G+ T LDLA D IR+ + VV R +ELRG CL LE Sbjct: 184 DLWGVGRRLARWCRLRGLATALDLAQADSALIRQGWGVVGLRLQQELRGISCLALESEPA 243 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 KQE SRSFG + D S+R+A+ ++ R AEKLR + Q ++ F++TSPFA Sbjct: 244 AKQETCVSRSFGTAVLDRLSLREAVAAHVVRGAEKLRRQGQRASRLTVFVRTSPFAA--G 301 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 +Y NS SV L T D+ ++ A +D +++ G+ +QKAGV+LG Q Q +L Sbjct: 302 FYANSISVSLPLATADTAVLLQRALPLVDQLFRHGYAFQKAGVLLGQLQPQEHLQHHLLV 361 Query: 363 D--NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 +L+ +D LN + G GT+ +A G++ W M+R LS +TT +DL Sbjct: 362 PCSPQQLRRRSRLLQAVDGLNQRFGTGTVQWAAVGVEPDWCMRRQHLSAHFTTSKADLPM 421 Query: 421 V 421 V Sbjct: 422 V 422 >UniRef50_C6XEM8 DNA-directed DNA polymerase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEM8_METSD Length = 425 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 191/424 (45%), Positives = 254/424 (59%), Gaps = 6/424 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL DVNA Y SC VF P L GK +VL+NNDGC ++RN AK LG+KMG+PWF+ K Sbjct: 5 IALVDVNAMYWSCHRVFNPSLEGKAGIVLTNNDGCAVSRNDLAKQLGIKMGEPWFQIKAN 64 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + VV FSS Y LYA MS R + L E SP EIYSIDE F DLTG+R + G Sbjct: 65 PKYKDVVAFSSTYALYASMSKRFTNLLAEFSPHQEIYSIDECFLDLTGMRGRQ--IQRGL 122 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR--KLMSAL 179 IR + L V VGI TKTLAKLANH AKK+ GVVDL+ E + + + L Sbjct: 123 NIRHRIKNEVGLPVCVGIGSTKTLAKLANHIAKKF-PHFEGVVDLNEWEPHQMVAMFTML 181 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V VWG+GRR +++L A+ +K+V+DL D FIR+ F+VVLERTVREL GE CL LE Sbjct: 182 DVGQVWGVGRRYAERLAALDMKSVMDLKLADPEFIRQQFSVVLERTVRELNGEACLDLEA 241 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 K++II SRSFG +I D P++ A+ S+ +RAAEKLR ++ Y IS ++T+ F Sbjct: 242 VREDKKQIISSRSFGRQIEDLPALVNAVSSFVSRAAEKLRLQNSYAGVISVEVETNRFNP 301 Query: 300 NE-PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + YG A ++L PT D+ + + A L I++ G RYQ+AG+ML + G Q+ Sbjct: 302 DPYSKYGKRACIRLPAPTDDTLKLNHVAQWILKKIYKPGFRYQRAGIMLDEIVPAGGGQV 361 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 +LF + L V+D +N++ G+ + G W MK+ +LSP YTTR DL Sbjct: 362 DLFGYQPAIGKRDNLSAVVDEINSRMGKNAVRVGTMGFSMDWDMKQDLLSPFYTTRIEDL 421 Query: 419 LRVK 422 + Sbjct: 422 PVAR 425 >UniRef50_C7LWM3 DNA-directed DNA polymerase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LWM3_DESBD Length = 412 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 95/416 (22%), Positives = 167/416 (40%), Gaps = 22/416 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AF+ S E P L GKPVV+ + G A + EA+ G++ P + K Sbjct: 14 VILHLDMDAFFTSVEQADDPLLQGKPVVIGQSLRGVASAASYEARKYGIRSAMPIVQAKK 73 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-F 119 L V Y ++S ++M+ + L P VE S+DEA+ D++G R + Sbjct: 74 LCPHA--VFLPGRMSRYREISVKIMNIMRALCPLVEQASVDEAYADISGTRRIFGPPENI 131 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R ++A +L T+LT VGIA K LAK+A+ K G + + L Sbjct: 132 ARRLKAEILAATNLTCSVGIAPNKFLAKIASDWNKP------GGLTFIPPADVPAFLRDL 185 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G++ ++L +G+ T+ + + + G + Sbjct: 186 PLGRIPGVGKQFQEELRRIGVTTIPHVLAHPRTYWNELMGKRGAFLHDRACGIDDSPVVP 245 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + + D + + + A R +LR + ++ IK F+ Sbjct: 246 GSDP-KSCSAENTLDRDTLDRTLLERWLLIQAERIGRELRGLGKKGLTVTLKIKFQDFS- 303 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S L PT + +I AA L A + + G + +F Q Sbjct: 304 -----SITRSRTLARPTDITTEIFEAARMLLTA-EKLPRPVRLIGTGVSNFR---FVQAE 354 Query: 360 L-FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 L +A R S+QL MD + K G ++ A I++ + +LS + T Sbjct: 355 LPLMPDAGRKRSQQLDQAMDRIRDKFGNKSILRAEAAIRESDAVN-DLLSQKNRTS 409 >UniRef50_C9LED2 UmuC protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LED2_9BACT Length = 422 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 162/423 (38%), Positives = 239/423 (56%), Gaps = 3/423 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL D N+F+ S E F P L GKPV VLS+NDG ++A EAK +G+K GDP FK +D Sbjct: 1 MWALADCNSFFCSVEKAFHPGLRGKPVCVLSSNDGNIVALTPEAKKIGIKRGDPVFKVRD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L V FS+N +LYA MS RV + L + VE YSIDE+FC L G D+ +F Sbjct: 61 LISCHNVKLFSANMKLYAAMSRRVTNMLRKRIHHVENYSIDESFCCLDGYEQLYDMENFM 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 REI V T + + VGIA +KTLAK+ + AK+++ V + E++RK ++ + Sbjct: 121 REIVENVRLWTAIPMSVGIAPSKTLAKIGSKFAKQYKGYRS-VCLIDTEEKRRKALALVD 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + DVWGIGRR KKL I T L AD ++R F + + T +EL G C+ E Sbjct: 180 LSDVWGIGRRTLKKLAYYNIHTPLAFADKSENWVRSRFTLPMIHTWKELNGVDCIDTTEV 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 KQ I SRSFG +T+ ++ ++ +A+ A KLRS+ CR ++ FI T+ F + Sbjct: 240 I-AKQTICTSRSFGNMVTELEDLKASVAHFASSCANKLRSQSSLCRSVTVFIATNRFRED 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y N + L T D+ +I N A L +++ G +Y+K+GV+LGD S +L Sbjct: 299 LPQYNNMLTYTLPIATADTLEITNTAIAILQELYRPGIQYKKSGVVLGDISSGKAISQDL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI-QQQWQMKRAMLSPRYTTRSSDLL 419 FD + R QLM +D +N + G+ T+ +GI +Q+W K +P Y T ++++ Sbjct: 359 FDHISNRSERHQLMHFIDNINQRYGKKTILLGIEGIGKQKWTAKCEQRTPNYLTDINEIM 418 Query: 420 RVK 422 ++ Sbjct: 419 TIR 421 >UniRef50_B2FJL0 Putative UV protection and mutation protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FJL0_STRMK Length = 429 Score = 407 bits (1047), Expect = e-112, Method: Composition-based stats. Identities = 178/429 (41%), Positives = 240/429 (55%), Gaps = 18/429 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FY S E F P L G+PV V S+ DGCVIAR+A +K LGV MG P + Sbjct: 11 IALQDGNNFYCSVEASFDPRLRGRPVCVASSGDGCVIARDALSKKLGVPMGAPIHQIPPN 70 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 R + S+N+ LY D+S R+ S L +L P +E YSIDE F DL G+ + +D Sbjct: 71 VR-WQITFRSANFALYGDISTRIASILRDLFPAIEQYSIDENFIDLAGIPS-KDHERLAA 128 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 E RA +L+ T + VGI TKTLAKL+N AK GVV + + PV Sbjct: 129 EARARILKWTGIPSCVGIGPTKTLAKLSNKRAK---STVEGVVTTMPDDPA---LLTYPV 182 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +D WG+GR+++ +L A GI T DLA D+ +R + VV+ RT REL+G C LEE Sbjct: 183 EDDWGVGRKLTARLGADGILTAGDLAAADVDTLRSRYGVVMARTQRELQGISCADLEEHE 242 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++EI+ SR+FG+ IT + QAI ++A RA EKLRS + FI+T+PF N Sbjct: 243 AQRKEIMVSRTFGKDITSQTELMQAIATFAQRACEKLRSRQLQAAGVWVFIQTNPFKQNL 302 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 P Y S S +LL P+ D+R+I+ A A+++ G+ Y+KAGV L D V Q +LF Sbjct: 303 PQYNPSKSFRLLMPSADTREILMVAQGLAKAMFRPGYGYKKAGVSLLDLIHMDVQQGDLF 362 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA--------GQGIQQQWQMKRAMLSPRYTT 413 S+ +M VMD N K GRG++ FA + W +KR MLSP YTT Sbjct: 363 AGIDQ--RSKAIMEVMDRTNQKFGRGSMGFAFTAWRPSGKTLEKPAWSVKRDMLSPAYTT 420 Query: 414 RSSDLLRVK 422 L+RV+ Sbjct: 421 DWKQLIRVR 429 >UniRef50_A5D243 DNA polymerase IV n=4 Tax=Clostridia RepID=DPO4_PELTS Length = 402 Score = 406 bits (1045), Expect = e-112, Method: Composition-based stats. Identities = 95/408 (23%), Positives = 168/408 (41%), Gaps = 22/408 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 L D+N+FYAS P L GKPV+V + G V+A + EAKA GVK G + Sbjct: 5 ILLADMNSFYASVHQAMEPRLKGKPVIVGGDPARRHGIVLAASVEAKACGVKTGMTVREA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLT 117 L + + + Y + S R++ +++ SP VE +SIDEAF D++G Sbjct: 65 AALCPQG--IFLKPRHSHYINFSARIIRIMKDFSPLVEPFSIDEAFMDVSGCGLLFGSSL 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + +++A + + VG+ K LAK+A K G+ L + K+ Sbjct: 123 EIAVKLKARIKNEVGVLCSVGVGPNKLLAKMAAGMQKPD-----GLTLLDFPDVPVKIW- 176 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV +++G+G R+ K+L + I T+ DLA ++ +++ F +V G + Sbjct: 177 PLPVRELFGVGSRLEKRLRDLNIHTIGDLARYPLQVLKQKFGLVGHILHLSASGIDYSPV 236 Query: 238 EEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + + I + Y ++ I ++R R +S +K + Sbjct: 237 DPCSLERVRSIGHQITLPRDYWGYNEIKVVILELCEIVCRRVRLGGYAGRTVSLTLKDTD 296 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F S + + PT + ++ A + L W + GV L Sbjct: 297 FL------WLSRARTMNYPTASADEVYRVAVQLLHQHWPPWKPVRMVGVSLAGLVKNRAE 350 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 QL+LF + + +L D + + G ++ A +R Sbjct: 351 QLDLFGEA---ERARRLHAACDRIKDRFGEHSILRAVSLTPAGVLRER 395 >UniRef50_C0WCT4 DNA-directed DNA polymerase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCT4_9FIRM Length = 397 Score = 406 bits (1044), Expect = e-112, Method: Composition-based stats. Identities = 93/394 (23%), Positives = 160/394 (40%), Gaps = 21/394 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + P+ +PV+V + G V + EA+ GV P + + Sbjct: 12 IMHVDMDAFFASVEQLDHPEYRNRPVIVGGLSGRGVVSTASYEARRFGVHSAMPMKEALE 71 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDF 119 + + Y Y ++S ++ E SP VE SIDEAF DLTG+ D+ Sbjct: 72 RCPKG--IFVEGRYGRYLELSQKIRQIFHEFSPLVEPLSIDEAFLDLTGMERLVGDIPAL 129 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G I+ + + T LT VG+A K LAKLA+ K + + ++ L Sbjct: 130 GLRIKERIKKETGLTASVGLAPNKFLAKLASDLKKPNG------LVIIRQSEAASRIAPL 183 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ ++GIG R + L GI+T+ DLA D F+ F E +R G + Sbjct: 184 PISRIFGIGARSASLLTRFGIRTIGDLAACDASFLSPLFGKNTETILRFAHGLDNRPVIP 243 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q + +F + + D+ + + + + + +LRS ++ +KT F + Sbjct: 244 -DEKRQSLGRELTFEKDLRDHAVILEILWNLSQEVGFRLRSAGLSGYTVTLKMKTQDFKV 302 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + S+ P Q +I+ + GV + Q ++ N Sbjct: 303 H------TRSLSSDLPLQLDEEIMERVKILTRR-NPLRDPVRLLGVTVSHLVPQESSEQN 355 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 LF + Q +D L + G + Sbjct: 356 LFS---KSDRNTQRSLAVDALKKRFGETIIKKGA 386 >UniRef50_A5FU54 UMUC domain protein DNA-repair protein n=2 Tax=Acetobacteraceae RepID=A5FU54_ACICJ Length = 418 Score = 405 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 189/420 (45%), Positives = 235/420 (55%), Gaps = 8/420 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F L D N+FY S E F P+L +P+VVLSNNDGC IAR EAKALG+KMG+PW + Sbjct: 4 FGLIDGNSFYCSAEQAFAPELRSRPLVVLSNNDGCAIARTPEAKALGIKMGEPWHLFRKR 63 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 V SSNY LY DMS RV L E P+VE YSIDE F DL G+ DL F R Sbjct: 64 PESRAVEWRSSNYALYGDMSRRVYDVLTERVPQVEPYSIDEMFLDLDGIP---DLDRFCR 120 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 ++R V Q + VGI TKT+AKLAN AKK + GGV DL + E + + LP+ Sbjct: 121 DLRRDVRQIAKIPTCVGIGPTKTIAKLANKIAKK-ETALGGVCDLRDPELRARHYERLPI 179 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +VWGIG ++ KL A GI T+ D D R +R V R ELRG CL L A Sbjct: 180 AEVWGIGGQVGAKLAAAGITTIADFVRADPRAVRDMLTVTGARVQTELRGASCLPLSLMA 239 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 PT++ I SRSFG I +R+AIC++AARAAEKLR+E I+ F T+P + Sbjct: 240 PTRKGIAVSRSFGHMIDRPAELREAICTFAARAAEKLRAEGLEAGQITVFTHTNPHNGD- 298 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 P+Y K+ PT D+ +I A R L A+W G+RY KAGVML D Q LF Sbjct: 299 PWYSAQRQGKI-EPTADTGLLIGEAIRLLRAVWHPGYRYFKAGVMLQDLAPA-RRQAVLF 356 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 S M MD +NA+ GRGTL A W +R LSPRYTT++ ++L Sbjct: 357 ASFDRDQ-SAAAMKAMDAINARFGRGTLRIASTATSPSWGARRQNLSPRYTTQAGEMLVA 415 >UniRef50_C0ZFX0 DNA polymerase IV n=6 Tax=Bacillales RepID=C0ZFX0_BREBN Length = 413 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 101/412 (24%), Positives = 168/412 (40%), Gaps = 17/412 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + L D+ +FYAS E P+L KP+VV + G V+A AK+ GV + ++ Sbjct: 8 IVFLIDMQSFYASIEKGANPELRNKPIVVAGDPERRSGVVLAACPIAKSYGVVAAEALWQ 67 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDL 116 + R+ +V E+Y +S ++ E + +VE YSIDE F D+TG + D Sbjct: 68 AQQKCRQ--LVVVRPRMEMYIRISMQITRIFEAFTDKVEPYSIDEQFLDVTGSVHLFGDP 125 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +IR V T + VGI + K LAK+A K ++ GV E + Sbjct: 126 LQMAAQIRQRVWMETGINCRVGIGENKVLAKMACDNFAK--KREEGVF-WLKRETLADTL 182 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP++ ++G+G R+ + MG+ + LAD + +H+ V E R G Sbjct: 183 WKLPIEKLFGVGSRMKRHFHRMGVYQIGQLADMRPAILTRHWGVNGEVLWRTAHGIDDSP 242 Query: 237 LE-EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + +++ I + ++ + + R + +S + + Sbjct: 243 VALDSYDSQKGIGHHMTLPRDYHTASEIKVVLLELCEEVCRRARKKELMGSVLSVGCRGA 302 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 A G +KL T D+ + AA D WQ + GV LG V Sbjct: 303 DLAAGT---GFGRQMKLTEQTNDAMTLYEAACFLFDRHWQE-TPVRSIGVNLGQLVPDNV 358 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QLNLF D L MD + ++ G+ + A ++ +RA Sbjct: 359 VQLNLFTD---NHKRRSLAQAMDDIRSRYGQDAILRAASVLEAGQAKERARK 407 >UniRef50_UPI0000E87FBE DNA repair protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FBE Length = 419 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 165/423 (39%), Positives = 237/423 (56%), Gaps = 8/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M AL DVN FY SCE +F P L KPVVVLSNNDGC+I+R+ EAK LG+KMG+P FK Sbjct: 1 MIALVDVNNFYVSCERLFNPYLINKPVVVLSNNDGCIISRSQEAKNLGIKMGEPLFKASA 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + R+ V SSNY LYAD+S RVMS L + + EIYSIDE F D+ G N +D Sbjct: 61 IIRQHQVQVLSSNYPLYADISARVMSLLSDFTSTQEIYSIDECFLDMEGHENLQD---IA 117 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR--KLMSA 178 R+I+ + + + V VGI TK LAKLAN AKK Q Q GV +SN +M Sbjct: 118 RKIKRLLWRYLRMPVCVGIGPTKVLAKLANRCAKK-QDQQSGVFIISNASASELNNMMDD 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L VD +WG+G+ ++ KL I ++LDL ++ ++RK F + +ER + EL G CL ++ Sbjct: 177 LSVDQIWGVGKALAVKLQKKSIYSILDLKQSNPTWVRKFFGINMERIIYELNGVSCLLID 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 K+ I CSRSFGE + DY + +A+ +++ RAA K RS++ ++ F+ T+PF Sbjct: 237 NQYVAKKGIRCSRSFGENVNDYIRLAEAVTTFSGRAALKARSQNTGTNAVTVFLSTNPFN 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 +Y ++ ++ L T + I+ AA L I++ Y K GV+L Sbjct: 297 KEHRHYQDAITMPLEQLTNQTNLIVKAALSGLRKIYKQKVTYSKCGVILNSLEELDKLSY 356 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 L L ++D +N K + +L+ A Q + W M+++ S Y+T S+L Sbjct: 357 PLISPI--HNRQANLTKIIDEINNKFDKNSLHIAFQPLYPSWDMRQSYRSQSYSTSWSEL 414 Query: 419 LRV 421 L V Sbjct: 415 LLV 417 >UniRef50_Q3AKE9 DNA-directed DNA polymerase n=7 Tax=Bacteria RepID=Q3AKE9_SYNSC Length = 424 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 175/422 (41%), Positives = 237/422 (56%), Gaps = 6/422 (1%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N FYASCE P L G+PVVVLSNNDGC++AR+AEA+ALG++MG P+FK + Sbjct: 6 ALIDGNNFYASCEQSLDPALIGQPVVVLSNNDGCIVARSAEARALGIRMGTPYFKARREL 65 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 R VV SSNY LYADMS R+MS LE +E+YSIDEAF + RN DL + R+ Sbjct: 66 ERHNVVVRSSNYALYADMSQRMMSLLEAHCEELEVYSIDEAFGRIRRPRN-GDLQGWARQ 124 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +RA Q L + +G+ +K AKLAN AK+ G+ DL + + + + ++ Sbjct: 125 LRARARQNLGLPIAIGLGASKAQAKLANRLAKQ-APDHAGMFDLGQCDNPDRWLETIAIE 183 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 DVWGIGR+++ GI L D +R VV R RELRG CL LE Sbjct: 184 DVWGIGRQLAHWCRLRGISNARHLRDMPSGELRAKCGVVGLRLQRELRGHACLPLELAPA 243 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 KQE SRSF IT + QAI +Y RAAEKLR + Q ++ + +TSPFA Sbjct: 244 PKQETCVSRSFSRPITSQEELHQAIATYVVRAAEKLRKQRQRAAALTIYTRTSPFAP--G 301 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 +Y +AS +L P+ D+ ++ AA + I++ + KAGV+ S + Q +L Sbjct: 302 FYSQAASTQLDLPSNDTAVLLQAARPLVARIFRPHRQLAKAGVLTQHLQSHNILQTHLMV 361 Query: 363 DNAPRPGSEQ--LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 + ++ LM +D +N + GRGTL +AG G+Q W M+R LS TTR DL Sbjct: 362 PMSEEQQQKRECLMQTIDRINRRYGRGTLQWAGCGLQPSWLMRREQLSRAATTRLQDLPV 421 Query: 421 VK 422 VK Sbjct: 422 VK 423 >UniRef50_D0RPK3 Protein UmuC n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPK3_9RICK Length = 433 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 168/420 (40%), Positives = 249/420 (59%), Gaps = 3/420 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N+FY SCE +F P + PVVVLSNNDGCVI+R+ EAK +G+KMG+P+FK K L Sbjct: 14 IALVDCNSFYVSCERLFNPRINNLPVVVLSNNDGCVISRSVEAKKIGIKMGEPYFKVKHL 73 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + V FSSNY LY D+S RVM L++ P +EIYSIDEAF DL+ + DL +F Sbjct: 74 IKSHKVQVFSSNYALYGDISRRVMHVLKKFCPTIEIYSIDEAFLDLS-LIKDEDLENFIS 132 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 E+R +L+ T + V +G+A+TKTL+K+ANH AKK ++ L++ + L+ P+ Sbjct: 133 ELRFIILKWTGIPVSIGVAKTKTLSKVANHIAKK-EKIGIKSFILNDEKEIDDLLKNFPI 191 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +D+WG+GR+ISK + IK+ DL D R+I+K+ NV+ +TV ELRG C+ E + Sbjct: 192 EDIWGVGRKISKLYKSNNIKSAYDLKDASNRWIKKNTNVLGLKTVMELRGINCIGFESNS 251 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++ SRSFG+++ DY ++++++ ++ AAEK+R + Q + + FI+ SPF +E Sbjct: 252 NPRKNCCVSRSFGKKVLDYDTLKESVVAHCLNAAEKIRVDRQVVKSVIVFIRNSPFDKSE 311 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 ++ S V L P+ DS + +SL I+ G RYQKAGV+ +G LF Sbjct: 312 KFFSRSKKVDLPIPSDDSILLTKICIQSLKEIFLKGPRYQKAGVIFSGLSRKGKYDEGLF 371 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 + S+ LM +D N K GR + A G W+M+R S T+ L + Sbjct: 372 S-YEKKEKSQSLMKAIDKTNFKFGRNMITVADTGFCNNWRMRRGHSSKIDTSSYDFLPTI 430 >UniRef50_Q67QM6 DNA polymerase IV n=1 Tax=Symbiobacterium thermophilum RepID=DPO4_SYMTH Length = 361 Score = 403 bits (1036), Expect = e-111, Method: Composition-based stats. Identities = 101/361 (27%), Positives = 160/361 (44%), Gaps = 19/361 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+AS E P L GKPV+V N+ G V + EA+ GV+ P + Sbjct: 7 VIHLDMDAFFASIEQRDNPRLRGKPVIVGGSPNSRGVVSTCSYEARRFGVRSAMPSREAL 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L + V N+ YA + +V + + + +E SIDEAF D++G +D Sbjct: 67 RLCPQA--VFIRPNHAKYAAVGRQVRAIMRRFTDVIEPLSIDEAFLDVSG----QDAVRV 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 RE++ + HLT G++ K LAKLA+ K + + ER ++L+ L Sbjct: 121 ARELKEAIRAELHLTGSAGVSYCKFLAKLASDMQKPDG------LTVITWERAQELLPTL 174 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G + L A+GI T DL D +RKHF + + RG + Sbjct: 175 PVRKLWGVGPASEQALHALGIYTCGDLLAYDPDTLRKHFGKRADELILLARGIDPRPVVP 234 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + I +F TD + + + YA AE+LR + Y R ++ IK + F Sbjct: 235 YREA-KSIGEENTFPVDQTDREYLSRLLERYADNLAEELRRQGLYARTVTVKIKWNVFVE 293 Query: 300 NEP----YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 P + + S L PT D+R I A + G + + G+ + + QG Sbjct: 294 GGPKGGDFLQITRSQTLPMPTNDARTIGRVAREIFARVEWEGRKVRLLGLSVHNLVKQGE 353 Query: 356 A 356 Sbjct: 354 Q 354 >UniRef50_Q7USY7 DNA polymerase IV n=1 Tax=Rhodopirellula baltica RepID=DPO4_RHOBA Length = 396 Score = 402 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 104/411 (25%), Positives = 169/411 (41%), Gaps = 22/411 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQK 59 M D++AFYAS E RP+L G+PVVV + G V A + EA+ G+ P + Sbjct: 1 MILHVDMDAFYASVEQRDRPELRGRPVVVGGSEGRGVVTAASYEAREYGIHSAMPGSRAI 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L + YA + V +P V+ S+DEAF D++G + Sbjct: 61 KLCPHAD--FVRGRLDHYASVGRAVREIFHRFTPVVQPLSLDEAFLDVSGTIRLHGSPRE 118 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 G IR T+ + L VGIA K +AK+A+ K + R+ + Sbjct: 119 IGINIRETIRRELDLPASVGIAPLKFVAKIASDIGKPNG------FVEVPADGVREFLDP 172 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV +WG+G+ KL +G +T+ DL D+ ++ E G Q+ Sbjct: 173 LPVSRLWGVGKVGQTKLQRLGYRTIADLRVKDLDALKSQLGRWGEHLWNLANGIDRRQVV 232 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I R+F E ++D S+ + + + A +LR + I+ + F Sbjct: 233 -VDHLAKGIGHERTFAEDLSDIESLNAVVSYLSEQTARRLRRARRLASTITLKYRREDFQ 291 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDFFSQGV-A 356 S + KL TPT + +I+ A L + + + G+ LG Sbjct: 292 ------TFSRARKLSTPTDSTLEILQVAEELLLEMRSREPRSVRLLGISLGGLTDADAPK 345 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QL+LF + S ++ T+ D + K G+ +LY A QW ++ Sbjct: 346 QLHLFGEETGENASSKVDTLSDQIATKLGKHSLYRASS---HQWVDRKNTK 393 >UniRef50_B3E0C4 Nucleotidyltransferase/DNA polymerase UmuC n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0C4_METI4 Length = 421 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 161/422 (38%), Positives = 238/422 (56%), Gaps = 9/422 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F L D + FY SCE +F P L GKPVVVLSNNDGC+++R+ EAK LG+ MG P+F+ K+ Sbjct: 7 FCLVDCDNFYVSCERLFNPGLEGKPVVVLSNNDGCIVSRSNEAKLLGIPMGAPFFRWKEF 66 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 F++ GVV SSNY LY D+S R+M LEE +P VEIYSIDEA+ DL+ F R Sbjct: 67 FKQQGVVALSSNYALYGDISGRLMQLLEESAPCVEIYSIDEAWIDLSAHP---SPESFAR 123 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 E+R + + T + V +GIA TKTLAK+A+ AKK G+ L E + + L V Sbjct: 124 ELREKIRRWTGIPVTLGIAPTKTLAKVASKIAKK-TTALKGMNLLFGEEEIDQALRTLEV 182 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 D++WGIG R++ KL GI +DL + D IR+ F+V+LERTV ELR C LEE Sbjct: 183 DELWGIGARLAAKLKERGISKAVDLKNADPFKIRRLFSVMLERTVWELRAISCFGLEENV 242 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++I+ S++FG+ + +R A + +A KLR +S F++ PF Sbjct: 243 SPPKQILSSQTFGQTLFSLDELRAATAHFVKESARKLRQFGLAAHQLSVFLRHGPF---- 298 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 P Y SAS + + P D ++ A L A+++ Y K+GV+L D Q Q + + Sbjct: 299 PGYIESASFRFMEPIGDVIGLLEKADSLLQALYKPQRAYTKSGVILFDLLPQSCHQASFW 358 Query: 362 DDNAPRPGSEQ-LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 + L +++ L ++G+ TL + + + W+++ +P YT+R ++ Sbjct: 359 PPEEEKERKYATLSHLLEELPKQKGKPTLRVGTELLGENWRLRFQRKTPSYTSRWEEIPA 418 Query: 421 VK 422 VK Sbjct: 419 VK 420 >UniRef50_C6NU08 Error-prone repair protein UmuC n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NU08_9GAMM Length = 424 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 160/424 (37%), Positives = 244/424 (57%), Gaps = 11/424 (2%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N FY SCE +F+P L GKPVVVLSNNDGC +AR+ EAKALGV MG P+F+ + L Sbjct: 4 ALVDANNFYVSCERLFQPRLEGKPVVVLSNNDGCAVARSNEAKALGVTMGAPYFQWEKLA 63 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 ++ G+V SSNY LY ++S R+M L + EIYSIDE+F ++ + + + Sbjct: 64 KQHGIVVLSSNYALYGELSARLMRLLGNQAVGQEIYSIDESFLEVP--VADAEADSWAQH 121 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL--SNLERQRKLMSALP 180 +R + ++ L V VG+A TKTLAK+ NH AKK +R GV + +++R+ P Sbjct: 122 LRQQIRRQLGLPVCVGVAPTKTLAKVCNHWAKK-ERTAEGVCIWGDLDPQQRRQWFHETP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V D+WG+GRR++ +L+A G+++ DLA TD R++R+H+ V L R +ELRG PCL LEE Sbjct: 181 VGDLWGVGRRLAARLEAQGVQSAGDLARTDSRWLRQHYGVALARMQQELRGVPCLSLEEV 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +P +Q+I CSRSFG +T++ + +++ + R EKL + + + +++SPF Sbjct: 241 SPPRQQIQCSRSFGRAVTEFSDVLESLSLHTQRGIEKLHEQALWAGSVQVMVRSSPFR-- 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E +Y +A +L P++D R + A + +Q G YQK+G++L D +L Sbjct: 299 EGFYSGTAHRRLPEPSRDYRVLWEAVRSAAAEAFQPGVSYQKSGILLFDLQ-AQARTGDL 357 Query: 361 FDDNA-PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ--QWQMKRAMLSPRYTTRSSD 417 F +E+L + + G+ TL G++Q W M+ SP Y + Sbjct: 358 FAVQEGGEERAERLQEALQRAQDRFGKHTLARGVGGLRQGRDWAMRSDRRSPSYLSDWWS 417 Query: 418 LLRV 421 L Sbjct: 418 LPVA 421 >UniRef50_P54560 DNA polymerase IV 2 n=8 Tax=Bacillales RepID=DPO42_BACSU Length = 412 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 100/413 (24%), Positives = 169/413 (40%), Gaps = 18/413 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + L D+ +FYAS E P L +PV+V + G V+A AK GV ++ Sbjct: 6 VIFLVDMQSFYASVEKAENPHLKNRPVIVSGDPEKRGGVVLAACPLAKQKGVVNASRLWE 65 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 ++ V + Y D+S ++ + LEE + VE YSIDE F D+TG + Sbjct: 66 AQEKCPEA--VVLRPRMQRYIDVSLQITAILEEYTDLVEPYSIDEQFMDITGSQKLFGTP 123 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + + I+ +++ + VGI K LAK+A K + G+ L+ E + M Sbjct: 124 MEIAKSIQGRIMREIGVYARVGIGPNKALAKIACDNFAKKNK--NGIFTLTK-ENMKTEM 180 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV ++G+G R+ L+ MGI T+ LA + ++K + + G Sbjct: 181 WPLPVGSMFGVGSRMKHHLNRMGISTIGGLAAFPLDLLKKKWGINGHVLWMTANGIDYSP 240 Query: 237 LEEFAPT-KQEIICSRSFGERITDYP-SMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + ++ I + + ++ + + + R+ + +S + Sbjct: 241 VSTSSLDGQKAIGHGMTLPRDYEHFDKEIKVVLLELSEEVCRRSRNAGVMGQTVSVSCRG 300 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + F G + VKL PT ++D+ A R W G ++ GV L S Sbjct: 301 ADFDWPT---GFNRQVKLAEPTNSTQDVYEAVRRLFLTFWD-GKPVRRLGVNLSQLSSDD 356 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + QLNLF D A L VMD + + G + A +RA Sbjct: 357 IWQLNLFQDYA---KKMSLGYVMDGIKNRFGDTAIIRAASLTAAGQAFERAAK 406 >UniRef50_D1PC12 UmuC protein n=2 Tax=Bacteria RepID=D1PC12_9BACT Length = 461 Score = 400 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 190/462 (41%), Positives = 256/462 (55%), Gaps = 43/462 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M L D N FY SCE VFRPDL GKPVVVLSNNDGCVIAR+ EAKALG KMGDP+++ K+ Sbjct: 1 MIGLADCNNFYCSCERVFRPDLTGKPVVVLSNNDGCVIARSEEAKALGYKMGDPFYQVKE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-------RNC 113 GV FSSNY LY +SNRVMS L SPR++ YSIDE+F + + Sbjct: 61 KLEAEGVAIFSSNYTLYGSLSNRVMSMLSHYSPRIDQYSIDESFFEADESMAKVFFREHA 120 Query: 114 RD--------------------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAA 153 D L +G +I A VL+ + + VGIA+TKTLAK+ + A Sbjct: 121 EDHPTLFNKMTIDELSEKPDSLLHRYGSKISADVLRAVGIPISVGIAETKTLAKIGSKFA 180 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF 213 KK+ + G + ER+ K +S PV+DVWGIGR+I++KLD MGI+T AD + Sbjct: 181 KKY-KGFQGCCLIDTDERRHKALSLFPVEDVWGIGRQIARKLDYMGIRTAAQFADKKESW 239 Query: 214 IRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG-ERITDYPSMRQAICSYAA 272 +R HFN+ RT +EL GE C+ +EE P K+ I SRSF E ITD + +A+ ++A Sbjct: 240 VRSHFNITTLRTWKELNGESCISIEEL-PQKKSICTSRSFANEGITDKNVIEEAVANFAV 298 Query: 273 RAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 R EKLR + C+ I+ F TS F + P Y S+ L T +I+ AA L A Sbjct: 299 RCTEKLRRQGSVCQGITVFAWTSRFNEHVPEYTIHDSLTLPIATNAQEEIVGAALSILRA 358 Query: 333 IWQAG------------HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + ++KAGV+L Q +LFD R ++LM +D + Sbjct: 359 KYPKPMADSRPDRSDMSFHFKKAGVILWQISPDHPRQQDLFDPID-RSKQKKLMEAIDAI 417 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 N K G GT+ A QG ++ +KR +S ++TT D+L+VK Sbjct: 418 NRKNGYGTIRQAIQGTDCRFDLKREYMSKQFTTNIHDILKVK 459 >UniRef50_Q0ACU7 DNA-directed DNA polymerase n=3 Tax=Nitrosomonas eutropha C91 RepID=Q0ACU7_NITEC Length = 431 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 176/431 (40%), Positives = 255/431 (59%), Gaps = 14/431 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FY SCE VF+P L KP++VLSNNDGC IAR+ +AKALGVKMG PWF+ K Sbjct: 3 LFALIDGNNFYCSCERVFQPQLQNKPLIVLSNNDGCAIARSEQAKALGVKMGHPWFQVKH 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + G++ S+N+ LY DMSNR+MS EL EIYSIDE F G++ D+T Sbjct: 63 LEKSAGLISLSANFALYGDMSNRMMSLASELGDSQEIYSIDECFL---GLQGIPDVTQRA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHA-----AKK--WQRQTGGVVDLSNLERQR 173 ++ RA +LQ + +GI +KTLAKLANH K + + V +L L ++ Sbjct: 120 KDTRAKILQWIGIPTCIGIGASKTLAKLANHIAKDAERKPGSYPPRLAQVCNLVELTERQ 179 Query: 174 K--LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + L + ++WGIGRRI ++L GIKTV D + D +RK F+V LERT REL G Sbjct: 180 RMYLFGITDIGEIWGIGRRIGQQLKDAGIKTVKDFVELDPGTVRKRFSVTLERTWRELHG 239 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + C+ LEE K+EI +R+FG+ + D S+ +A+ + +RAAEKLR + + I F Sbjct: 240 QSCIDLEEIPAPKKEIAYTRTFGQPVRDLVSLTEAVTEFTSRAAEKLRRQQSFASAILVF 299 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 I TS P Y S +V L+ P D+ +++AA R L I++ G+ + KAGV+L D Sbjct: 300 IHTSKHRA-GPQYARSITVPLVRPASDTNSLLSAAIRGLRTIYKPGYDFIKAGVILMDLS 358 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI-QQQWQMKRAMLSPR 410 + V Q+ L ++ ++QLM +D +N++ GRGT+ + G ++ W M + +P Sbjct: 359 TTTVQQIELDFGSSMSNKADQLMQAIDQINSQFGRGTIIYGSTGTGKKTWSMSQQRKTPS 418 Query: 411 YTTRSSDLLRV 421 YT + D+ Sbjct: 419 YTAKIRDIPIA 429 >UniRef50_B8DRU5 DNA-directed DNA polymerase n=13 Tax=Proteobacteria RepID=B8DRU5_DESVM Length = 497 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 178/435 (40%), Positives = 238/435 (54%), Gaps = 17/435 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 +AL D N FYASCE +FRPDL GKP+VVLSNNDGC+I+R+ EAKALGV+MG P FK + Sbjct: 62 WALVDCNNFYASCERLFRPDLRGKPIVVLSNNDGCIISRSDEAKALGVEMGAPAFKVRRE 121 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 R GV FSSNY LY D+S+RVM TL LSP V++YSIDEAF L G D GR Sbjct: 122 LARLGVHVFSSNYALYGDLSSRVMRTLGTLSPEVDVYSIDEAFLPLRGPLAA-DPVAVGR 180 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER-----QRKLM 176 +R V + T + + VGIA T+TLAK+A AK + GV DL+ L+ Sbjct: 181 ALRERVARWTGIPISVGIAPTRTLAKIAGRVAK-RTPRCEGVFDLARSREVLGMSVDDLL 239 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC-- 234 +LPV+ VWG+GRR++ L GI T L D ++R+ +V RTV ELRG PC Sbjct: 240 GSLPVESVWGVGRRLAGMLRGAGIATARALRDAGDDWVRRRMSVTGLRTVLELRGLPCIG 299 Query: 235 -LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + E + ++ SRSF RI D +R+A+ ++AA A KLR ++ ++ Sbjct: 300 AEEQGEPPSPRHTVVSSRSFAGRIADVAMLREALATHAALAGAKLRRAGLVAGGLAVHVR 359 Query: 294 TSPFALNEP-YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 T+ +S ++ L PT DS I A LD +++ G+ Y KAGVML Sbjct: 360 TARHDEQAALRCDDSVALPLPVPTADSAVFIRLAHEGLDRVFRPGYPYAKAGVMLYGLER 419 Query: 353 QGVAQLNLF----DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRAM 406 Q +L E+LM V D +NA+ GRG L A +G+ W M++ Sbjct: 420 ADTRQGSLLALADGTAERDAARERLMAVADRINARYGRGKLRHAAEGLDAEAPWHMRQKH 479 Query: 407 LSPRYTTRSSDLLRV 421 SPR TT +L Sbjct: 480 RSPRRTTAWDELAEA 494 >UniRef50_C9LNT4 ATP-NAD kinase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LNT4_9FIRM Length = 403 Score = 399 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 94/393 (23%), Positives = 162/393 (41%), Gaps = 21/393 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P+ GKPV+V + G V + EA+A GV P K ++ Sbjct: 5 IMHVDMDAFYASVEQRDHPEWRGKPVIVGGSSRRGVVATASYEARAFGVHSAMPAVKARE 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTDF 119 L V +++Y +SN + + + +E S+DEAF D++G+ L Sbjct: 65 LCPDA--VFVLPRFDVYKSVSNEIHEIMLHYAVEIEPLSLDEAFMDISGLCGKYETLGAV 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 GR I+A + ++T L GIA K LAKLA+ K + + +++++++ L Sbjct: 123 GRAIKAEIKEKTGLVASAGIAPNKFLAKLASDLDKPDG------LRIIPYGKEKEILAPL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G +KL G T+ D+ + R G +E Sbjct: 177 PVRRLWGVGHVTERKLRNAGFLTIGDIQKAPFAKLASVLGNQASLIQRLSFGIDDRAVEA 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I ++ + +T+ + + I ++ A++LR R IS ++ + F Sbjct: 237 SRRI-KSIGDESTYEKDLTESADIDRQIAIHSDVVAKRLRRHKLAGRTISLKVRFASFR- 294 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S+ L T +I AA I+ + GV + + ++ Sbjct: 295 -----TVTRSLSLEEGTDLQEEIYAAALELKKRIYM-NEGVRLIGVTASNLAPP-LETVD 347 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 LF R + VMD + K G L Sbjct: 348 LFS--TMREKQVKAAAVMDAIQEKFGEHALRKG 378 >UniRef50_B8DIF6 DNA-directed DNA polymerase n=6 Tax=Desulfovibrio RepID=B8DIF6_DESVM Length = 481 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 101/363 (27%), Positives = 157/363 (43%), Gaps = 20/363 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E + P L GKPV V ++ G V A + EA+ GV+ P L Sbjct: 6 IMHIDMDAFFASVEQMDDPSLRGKPVAVGGSHRGVVSAASYEARRFGVRSALPMSTALRL 65 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-FG 120 ++ YA++S+R+M L E SP VE S+DEA+ D TG+ + G Sbjct: 66 CPH--LIVVPGRMRRYAEISHRIMDALREFSPLVEPASVDEAYLDATGLERLFGPVENMG 123 Query: 121 REIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++A VL T LT VG A K LAK+A+ K + + E + + L Sbjct: 124 MAVKARVLDVTGGLTCSVGAAPVKFLAKIASDVNKPNG------LFILYPEDVAEFLRTL 177 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + G+G+R L+ +G++ D+ F + F G ++E Sbjct: 178 PVGRIPGVGKRSLDALEQLGVRFAGDVLRYSREFWERRFGKGGVHLHERASGVDPREVEP 237 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + +F E D +R+ + + A R LR + R I+ +K + F Sbjct: 238 YSEP-KSESAENTFSEDTADRAVLRRWLLAQAERVGASLRRQRLAGRTITLKVKYADFR- 295 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ--GVAQ 357 S S L PT + I + A R LDA+ A + GV + +F G Q Sbjct: 296 -----SISRSHSLPEPTASTETIFDEACRLLDALTLADK-VRLIGVGVSNFGPAHHGPRQ 349 Query: 358 LNL 360 L L Sbjct: 350 LTL 352 >UniRef50_A4CII2 DNA polymerase IV n=20 Tax=cellular organisms RepID=A4CII2_9FLAO Length = 366 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 86/360 (23%), Positives = 157/360 (43%), Gaps = 18/360 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E +P+L G+P+ V G V A + EA+ GV+ + + Sbjct: 10 IIHIDMDAFFASVEQRDQPELRGRPIAVGGGAKRGVVAAASYEARTFGVRSAMSGVQARR 69 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDF 119 L +V ++ Y ++S ++ E + VE S+DEA+ D+T R T Sbjct: 70 LCPE--LVFVKPRFDRYREVSRQIRGIFLEYTDLVEPLSLDEAYLDVTANRKGMPSATLI 127 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 REIR +L+ T LT GI+ K +AK+A+ K ++T E ++ + +L Sbjct: 128 AREIRRRILEETGLTASAGISVNKFIAKVASDFNKPNGQKT------VPPEDVQEFLESL 181 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + G+G+ ++K++A+GI T DL F+ HF R +RG ++ Sbjct: 182 EIRKFHGVGKVTAEKMNALGIFTGADLRRQSEHFLTGHFGKSGHHYYRVVRGVHDSPVQP 241 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + R+F E ++ M + + A + +LR+ ++ + I+ I+ S F+L Sbjct: 242 SRVP-KSLGAERTFSENLSSEVFMVEKLTKIAEELSRRLRTRNRSGKTITLKIRYSDFSL 300 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S L I+ AA L + G+ L + ++ + Sbjct: 301 Q------TRSRTLAEYIDSPERILAAARDLLYQQPLEN-SVRLLGISLSNLDTEKEKTES 353 >UniRef50_Q1IRF1 DNA-directed DNA polymerase n=2 Tax=Acidobacteria RepID=Q1IRF1_ACIBL Length = 425 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 95/405 (23%), Positives = 158/405 (39%), Gaps = 23/405 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AF+ S E +F P L GK VVV + G V A + A+ GV P Sbjct: 17 VIFHVDMDAFFVSVEELFDPSLKGKAVVVGGHRDERGVVSAASYAARKFGVHSAMPLRTA 76 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-T 117 L + + + E Y + S + L++ SP+VE+ SIDEA+ D+TG Sbjct: 77 AKLCPDA--IFVNGHPERYREYSGKAFEVLKKFSPKVEMASIDEAYLDMTGTERLHGPPL 134 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + + T L +GI ++ +AK+ + AK GV+ + + ++ Sbjct: 135 KAAHALHQFMKSETKLNCSIGIGTSRLIAKVCSDQAKPN-----GVLYIVPGQE-ASFLA 188 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC--- 234 L V + G+G+ +KL+ +GIK V DLA D F+R+ F + RG Sbjct: 189 PLSVRKIPGVGKVFEQKLNEIGIKKVGDLAKLDDAFLRERFGEWGLALAGKSRGLDAGGY 248 Query: 235 -LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + + I +F D + I + ++R + R + ++ Sbjct: 249 FDRDVAVDEGPKSISHEHTFNTDTRDQEKLEAMIARLSEMVCRRVREHELHARTVQIKLR 308 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 S F + + L PTQ + A WQ G + GV + F Sbjct: 309 YSDFT------TITRAHSLEQPTQLDTVVAETARTLFRDNWQRGRTIRLIGVHVAGF-DD 361 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 QL+L S+ L V+D + K G + A + Sbjct: 362 VPQQLDLLTQTHDDKVSKALS-VVDRMRDKFGENAVSLATGLKSR 405 >UniRef50_B9JZV6 DNA-damage-inducible protein n=17 Tax=Bacteria RepID=B9JZV6_AGRVS Length = 385 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 89/358 (24%), Positives = 150/358 (41%), Gaps = 17/358 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E +P+L GKPV V + G V A + EA+A GV P K Sbjct: 35 IIHVDMDAFYASVEQRDKPELLGKPVAVGGSAARGVVAAASYEARAFGVHSAMPSVTAKR 94 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 ++ +++Y +S+++ E +P +E S+DEA+ D+T + T+ Sbjct: 95 KCP--DLIFVPPRFDVYRQVSHQIREIFAEYTPLIEPLSLDEAYLDVTENLKGMEIATEI 152 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIRA + T L GI+ K LAK+A+ K + + + + AL Sbjct: 153 ALEIRAKIKAATGLNASAGISYNKFLAKMASDLNKPNGQA------VITPKNGPGFVEAL 206 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV G+G ++++ GI+T LDL ++F++ HF RG Q+ Sbjct: 207 PVKRFHGVGPATAERMQRHGIETGLDLKSKSLQFLQTHFGKSGSYFYGIARGIDERQVRA 266 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + +F E I D R + A + S + I+ IK S F+ Sbjct: 267 DR-IRKSVGAEDTFVEDIDDLDPARAELRPLAEKVWRYCESHDIKGKTITVKIKYSDFS- 324 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S + D I+ A L +++ H + G+ L ++ Q Sbjct: 325 -----QATRSKTVAGYVSDIDMIMGIAEPLLASVFPFKHPVRLLGITLSSLNTEESEQ 377 >UniRef50_B5EN92 DNA-directed DNA polymerase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EN92_ACIF5 Length = 378 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 88/375 (23%), Positives = 145/375 (38%), Gaps = 27/375 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+A+ E P+L G+PV+V + G V + EA+ G+ + + Sbjct: 15 IIHVDMDAFFAAVEQRDHPELRGQPVIVGGDPAGRGVVATCSYEARRFGIHSAMTAARAR 74 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L + V + Y + S +VM L +P VE S+DEAF D+T Sbjct: 75 SLCPQA--VFVRPRMDAYREASRQVMGILRCYTPLVEPLSLDEAFLDVTAATADGVLAVR 132 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REIRA + + T LT G++ K LAKLA+ K + + E ++ Sbjct: 133 IAREIRARIERETGLTASAGVSYNKLLAKLASEWRKPNG------LFVVPPEHGLAFLAP 186 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G KKL AMGI TVLDL + + F RG ++ Sbjct: 187 LPVGKLHGVGPATVKKLSAMGIHTVLDLRNASREVLIAQFGKAGLWFYEVARGIDSRPVQ 246 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F + + D M + A + + +L++ R +S + F Sbjct: 247 TSR-QRKSVGYERTFPQNLEDPKVMLSTLRQMAGQVSARLQALGLAGRTVSIKARFPDFE 305 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR----YQKAGVMLGDF---- 350 + + + II L A + GV + Sbjct: 306 ------TVTRAHTDAQAIWRTEAIIACLPGLLAKAIPASLPMHASVRLLGVTVSGLVNVE 359 Query: 351 -FSQGVAQLNLFDDN 364 Q+NL ++ Sbjct: 360 AVPPEAGQMNLLEEP 374 >UniRef50_Q1QXW8 DNA-directed DNA polymerase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXW8_CHRSD Length = 419 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 168/424 (39%), Positives = 228/424 (53%), Gaps = 9/424 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FYA+CE +F P L G P+ VLSNNDGCVIAR+ E KAL + MG P K Sbjct: 1 MFALIDCNNFYAACERLFEPRLEGVPLGVLSNNDGCVIARSEEFKALDIPMGIPTHKIAP 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 RR +V SSNY LY D+S RV L + P +E YSIDE F DL G+R D G Sbjct: 61 HLRR-RIVLKSSNYTLYGDLSARVQQVLAQQVPTLEPYSIDECFLDLRGMR--EDWHALG 117 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR--KLMSA 178 + +V ++ L V +GIA T+TLAKLAN AK Q V + + ++ Sbjct: 118 ATLVRSVQRQVGLPVSIGIAPTRTLAKLANRQAK-TQPTRPQVCVWQSADAPELAAHLAR 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L +VWG+G R++ +L MGI T L +T +R+ F+VVL RT EL G+ CL + Sbjct: 177 LSPREVWGVGERLNARLAGMGIVTAAALRETPDSVLRRRFSVVLARTAAELNGQACLSMG 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + ++ I+CSRSFG+ + D S+ A+ + RA EKLR + I +++T+P Sbjct: 237 DLETPRRSILCSRSFGQPLRDRASLAGALRHHCQRAGEKLRRDAMQASAIGVYMRTNPHH 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + ++ L P+ D++ + AA R L +WQ YQK GVML + + +Q Sbjct: 297 AD-SFHQACEWAALPFPSADTQQLNRAAQRLLARLWQPA-AYQKLGVMLTELTPRRQSQT 354 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 LFD P E LM DT+ A+ GR L Q WQM A S YTTR +L Sbjct: 355 TLFDGAEP-ARQEALMHAWDTIRARYGRQALTLGPQPADAPWQMNSAYRSACYTTRWDEL 413 Query: 419 LRVK 422 R + Sbjct: 414 PRAR 417 >UniRef50_Q2YI99 Nucleotidyltransferase/DNA polymerase n=3 Tax=Bacteroidetes RepID=Q2YI99_9BACT Length = 431 Score = 396 bits (1019), Expect = e-109, Method: Composition-based stats. Identities = 157/434 (36%), Positives = 239/434 (55%), Gaps = 15/434 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+ + D + Y SCE VFRPDL GKPVVVLSNNDGCV+AR+ EAK +G+K G P+F+ Sbjct: 1 MYGIIDCDNCYVSCERVFRPDLNGKPVVVLSNNDGCVVARSNEAKKMGIKAGTPYFQLAQ 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + + FSSNYELY +++ RV+ + + +P+ YSIDE F + ++L G Sbjct: 61 QYPDAKIAVFSSNYELYGELTGRVVEIIRQEAPKYFRYSIDECFVYFNDFED-KNLKSGG 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + + + V +G+A TKTLAK+A++ AKK+ + E+ K + P Sbjct: 120 ENLHKRIRKSVGMPVSIGLAPTKTLAKMASYFAKKYAGYRHC-CLIDTDEKWTKALKLFP 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEE 239 +++VWGIGRR + KL+A+G+ T D A ++R F N+V+ RT +EL G + EE Sbjct: 179 INEVWGIGRRYAAKLEALGVHTAYDFAQHHGDWVRATFHNIVIYRTWQELNGVDAVPNEE 238 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 A K+ I SRSF +TD+ +++ + +YAAR AEKLR + ++ F+ T+ F Sbjct: 239 MA-KKKSICTSRSFNGMVTDFDTLKTHVSNYAARCAEKLRQQGTVASIVAVFLHTNLFRE 297 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + P Y N +L T + DI AA L +I+ G+ Y+KAGV++ QL+ Sbjct: 298 DLPQYWNFQEKRLTVGTNSTIDICKAANEVLQSIYVKGYHYKKAGVIVMGIGPNAPMQLD 357 Query: 360 LFDDNAPR-PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW----------QMKRAMLS 408 LFD NA + ++L V+D +N G T+ Q Q+ +K S Sbjct: 358 LFDYNAEQFQKMKRLDAVIDRINKVNGTETIVLGSQQYTQKDGKGRAEVFANAIKHDYRS 417 Query: 409 PRYTTRSSDLLRVK 422 TTR SD++ +K Sbjct: 418 KNPTTRWSDIIHLK 431 >UniRef50_Q2KZS3 DNA polymerase IV n=2 Tax=Proteobacteria RepID=Q2KZS3_BORA1 Length = 360 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 99/366 (27%), Positives = 156/366 (42%), Gaps = 21/366 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E RP+L G+PVVV + V A + EA+ GV + + Sbjct: 8 IVHIDMDAFYASVEQRDRPELRGQPVVVAWTGARSVVCAASYEARRFGVHSAMAVSRAQR 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L V ++ Y +S +V + +E S+DEA+ D+T T Sbjct: 68 LCPDA--VYVPPDFNRYRAVSRQVREIFSRHTDLIEPLSLDEAYLDVTVNKLGLPSATAV 125 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IRA + + T LT G+A K LAK+A+ K + + + + + L Sbjct: 126 AEAIRAQIQRETGLTASAGVAPNKFLAKIASDWNKPDG------LFVLRPAKVLEFLQPL 179 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV V G+GR +L+++GI TV DLA + HF R RG +++ Sbjct: 180 PVRKVPGVGRVTQARLESLGIHTVGDLATCAPAELEHHFGRHGLRLHELARGLDEREVQP 239 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P Q++ +F + + +A+ AAR E+ R + Q R +KT F L Sbjct: 240 DQPL-QQVSAENTFERDLR-LADLGEALDRLAARVWEQARKKGQLGRTAVLKLKTDRFRL 297 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDFFS--QGVA 356 + S+ L P + ++ A R + H RY+ AGV + +F Q Sbjct: 298 ------LTRSLTLSQPPSSAEELAAIARRLCARVDLPAHTRYRLAGVGMSNFTDPAQSAR 351 Query: 357 QLNLFD 362 Q +LF Sbjct: 352 QPDLFG 357 >UniRef50_C0QJE1 DinP n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJE1_DESAH Length = 384 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 93/397 (23%), Positives = 161/397 (40%), Gaps = 20/397 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 M D++AF+A+ E P+ G+P+VV N+ V + EA+ G+ P F Sbjct: 1 MILHMDMDAFFAAIEQRDHPETAGRPLVVGGNSKRSVVATASYEARRFGIHSAMPMFMAL 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 D ++ + YA +S ++M+ L E +P VE SIDEAF D+TG + Sbjct: 61 DKC--SHLIVIPPDKSKYAAVSGQIMTLLNEFTPLVEQVSIDEAFLDITGCERLFGSVEK 118 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+ + Q T LT +G + K LAK+A+ K + +++ Sbjct: 119 ICVAIKDRIKQETGLTCSIGASHLKFLAKIASDMNKPDGIH------IIKRTDTPEVIQT 172 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + V G+G R ++ +GI T+ D++ + K F + RG + Sbjct: 173 LAIKKVPGVGERAMDQMKQLGIITLGDISRIPHPILEKKFGKFATDLLNFSRGIDPSIIG 232 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 P + I + D M++ + ++A R +LR+++ I+ +K S F Sbjct: 233 TSGPI-KSISSESTLENDTLDMVVMKKHLLAHAQRVGRQLRAKNLLATNITIKLKFSDFT 291 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-FSQGVAQ 357 + KL+ P S I A + + + GV + F Q Sbjct: 292 ------QITRQTKLMVPICASTAIYREACTLFEQTAKTRK-IRLLGVGVSSFSTPDAPVQ 344 Query: 358 LNLFDD-NAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 L LFD+ + L +D ++ + G T+ A Sbjct: 345 LELFDNIDQKDRRWAVLDRAVDRISHRFGAKTITSAS 381 >UniRef50_D0WQX0 DNA polymerase IV n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WQX0_9ACTO Length = 445 Score = 394 bits (1012), Expect = e-108, Method: Composition-based stats. Identities = 96/414 (23%), Positives = 162/414 (39%), Gaps = 37/414 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+ S E + RP+L GKPV V G V A + EA+ GV P + Sbjct: 23 ILHVDMDAFFVSVELLDRPELAGKPVAVGGAERGVVSAASYEAREFGVNSAMPVARALRA 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFG 120 ++ Y+++S ++M L +++P VE S+DEAF D+ G R Sbjct: 83 CPHLTMI--PPRPGRYSEVSRQIMDILHDVTPLVEKLSVDEAFLDVGGARRLMGGPVRIA 140 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++RA + + + VGIA TK +AK+A+ AK + L + LP Sbjct: 141 TDLRARIRREVGVPASVGIAATKHVAKIASAHAKPDG------LLLIPRSATIAFLHGLP 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 V +WG+G + +L GI+TV +LAD + + R G+ ++ Sbjct: 195 VGALWGVGEKTRARLANQGIETVGELADAGPERLARILGRAHGTHLYRLAMGQDPRPVQT 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I +F E + D + + + + A A +LR H R ++ ++ + F Sbjct: 255 SREE-KSIGKEETFFEHVADRGKLERILLAQAHATARRLRRAHLTARTVAIKVRFADFT- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ-GVAQL 358 + S PT + D+ A D++ +G + G+ Q QL Sbjct: 313 -----TITRSTTFARPTDLAADLYAGAKHLFDSVAVSGEGLRLLGLRAEQIVDQREGVQL 367 Query: 359 NL----------FDDNAP---------RPGSEQLMTVMDTLNAKEGRGTLYFAG 393 L F D A P E+ +D + + G Sbjct: 368 ALGADSDDEAWAFGDQAGEGMRQAFGVNPRLERAEAALDRIRDRFGPSFAGPGS 421 >UniRef50_B2GJQ9 DNA polymerase IV n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GJQ9_KOCRD Length = 412 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 99/395 (25%), Positives = 166/395 (42%), Gaps = 22/395 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++ FY E + P G+PV+V + V++ + EA+ GV P + + Sbjct: 17 ILHVDMDMFYVGVELLDAPQHRGRPVIVAGSGPRSVVLSASYEARRFGVHSAMPVSQARA 76 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDF 119 V + E YA S VM ++ RVE S+DEAF D++G +R C + Sbjct: 77 RCPSA--VLLEPHREAYAHYSRIVMDIFRSVTDRVEQLSVDEAFVDVSGAIRRCGPPVEI 134 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R +R T+ QRT LT VG+A+ KT+AK+A+ K + + E R ++ L Sbjct: 135 ARGLRRTIQQRTGLTASVGVAENKTVAKIASAHCKPDG------LLVVAPEHTRAFLARL 188 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 PVD +WG+GRR S+ L A G+ TV D+A T + + V + G + Sbjct: 189 PVDRLWGVGRRTSETLRAAGLATVGDIAGTPLPRLHALVGVASGSHLQQLALGHDPRPVT 248 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + R+F +++ +++ + A +LR + ++ + F Sbjct: 249 PTREE-KSLGAERTFQTDLSETAELKRVLLGLCHETAARLRRHGLRAGRVGLKLRYADFT 307 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-Q 357 S S L P + D+ A LDA+ + + G+ A Q Sbjct: 308 ------TISRSRTLGHPVTSAHDLYTEAAGLLDALGRRPQAVRLVGIRAEKLVGADHALQ 361 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 L+L + MD ++ + G GT+ A Sbjct: 362 LSL---DGRDAEWGAAEEAMDRVHHRFGPGTVRPA 393 >UniRef50_C6VYA9 DNA-directed DNA polymerase n=15 Tax=Bacteroidetes RepID=C6VYA9_DYAFD Length = 372 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 80/372 (21%), Positives = 147/372 (39%), Gaps = 26/372 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P+ GKP+ V + G V + EA+ GV+ P + Sbjct: 13 IIHIDMDAFYASVEQRDFPEYRGKPLAVGGSPTGRGVVATASYEARKFGVRSAMPSRQAI 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L + ++ +E+Y +S + + +E S+DEA+ D+T + Sbjct: 73 QLCPQ--IIFVHPRFEVYKSVSRSIREIFSRYTDLIEPLSLDEAYLDVTEDKMGIGSAME 130 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++I+ + + HLT G++ K +AK+A+ K G + + M Sbjct: 131 IAKQIKQAIQEELHLTASAGVSVNKFVAKIASDIHKPNGLTFIG------PSKIERFMDQ 184 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV+ G+G+ + K+ M + T DL + HF R +RG +++ Sbjct: 185 LPVEKFHGVGKVTADKMKGMQLFTGSDLKKLTEEELVNHFGKTGHFYYRIVRGIDDREVQ 244 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 T + + +F +T M + + A +L ++ R ++ +K S F Sbjct: 245 THRET-KSLGAEDTFTYDLTTPDEMNKELDRIGVTVANRLETKKLKGRTVTLKVKFSDFT 303 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS------ 352 + + P D I + A + L+ + G + G+ L +F Sbjct: 304 ------QITRNHSFAHPVGDLDTITDTAKQLLEKLDLEGKAVRLLGISLSNFHEPEVKYR 357 Query: 353 --QGVAQLNLFD 362 + QL LF Sbjct: 358 KYKDPEQLELFP 369 >UniRef50_B0PEH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PEH3_9FIRM Length = 415 Score = 393 bits (1010), Expect = e-108, Method: Composition-based stats. Identities = 86/403 (21%), Positives = 158/403 (39%), Gaps = 20/403 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D +AFYAS E ++ P L G+PV V+ + G V+A++ EAK GV+ GD ++ Sbjct: 8 ILHVDCDAFYASVECLYNPALRGRPVAVVGDPELRHGIVLAKSQEAKLFGVQTGDALWQA 67 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLT 117 + + + +++E Y S E S R E + +DE++ DLTG D Sbjct: 68 RQKCKE--ITFVPAHFEKYLSFSRMTKEIFSEYSDRCESFGLDESWIDLTGCTELFGDGP 125 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +IR + + +T VG++ K AKL + K + + ++ + Sbjct: 126 AVATQIRRRIKEELGITASVGVSFNKVFAKLGSDLNKPDGM------TVIAYDGFKEQVW 179 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV + +GR + KL + GI T+ LA I F+ F + G + Sbjct: 180 PLPVKTLLYVGRATTGKLKSYGITTIGALAQAPITFLEHRFGKIGRMLWMFANGLDTSPV 239 Query: 238 EEFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + I S + + ++ + + + +LR C+ ++ I+ S Sbjct: 240 SNIGAKSLIKSIGNSTTAPRDLITDQEIKITLYALCESISARLREHSFRCKTVALTIRDS 299 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + L P+ ++++ +AA + G + GV + Sbjct: 300 ------SLTSFERQLALKRPSCITQELFDAAFSLYKQHHKCGLPVRSLGVRAANLMLIDC 353 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 QL++F D A E+L +D + + G + Sbjct: 354 MQLSIFPDVARAQKQERLEETVDDIRRRFGHFAVQRGVMLTDP 396 >UniRef50_Q19NE6 UV protection and repair protein n=9 Tax=Enterobacteriaceae RepID=Q19NE6_ECOK1 Length = 419 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 198/422 (46%), Positives = 270/422 (63%), Gaps = 4/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+ D+N YA+ E P L KP+++ SNND VIA N AK++G+K G P FK +D Sbjct: 1 MYMHVDINGAYAAFECAMDPKLSKKPLIIASNNDSSVIAMNKLAKSVGIKRGTPIFKCRD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ + SSN+ LY D SNR TLE +P+ YSIDE F L + D D+G Sbjct: 61 LIQQHRIEVRSSNFTLYEDYSNRFHETLESFAPQSSRYSIDENFMLLKNMNKIIDYEDYG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R IR+T+L LT GVG + TKTLAKL +A+K+W GGVV L++ R RKL+ + Sbjct: 121 RLIRSTLLHNLSLTCGVGCSSTKTLAKLCTYASKRWAAT-GGVVVLTDQARIRKLLGLIS 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++WGIG++IS++L A GI T D ++D+RF+RK F V +ERT REL GEPC +L E Sbjct: 180 TREIWGIGQKISERLSAFGIITAGDFYNSDVRFLRKSFGVEIERTWRELHGEPCFRLHES 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P +Q+II SRSFG+R+ + + +A+ + ARAAE+LR + + R I+ FI++S +A Sbjct: 240 PPVRQQIIVSRSFGQRLNEIGKLHEAVSFFTARAAEQLRKDGSWTRQITVFIQSSNYAQG 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E Y N L TQD+RD+++AA L+ I++ G Y KAGVML G QL+L Sbjct: 300 ENRYSNCGIEPLT-ATQDTRDLVDAAMTILNRIYKPGIAYAKAGVMLSAMTD-GTEQLSL 357 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 FD+ RPGS+ LM VMD N KE RG L+ G+GIQQ ++MK+AMLSPRYTTR +LL Sbjct: 358 FDERPARPGSQALMKVMDRFN-KEKRGALFLLGEGIQQDFRMKQAMLSPRYTTRWDELLV 416 Query: 421 VK 422 VK Sbjct: 417 VK 418 >UniRef50_B6BWB3 DNA-directed DNA polymerase n=1 Tax=beta proteobacterium KB13 RepID=B6BWB3_9PROT Length = 414 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 165/422 (39%), Positives = 242/422 (57%), Gaps = 10/422 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M AL DVN FY SCE VF L PVVVLSNNDGC+I+R+ EAKALG+KMG P+F+ +D Sbjct: 1 MIALVDVNNFYVSCERVFNRSLEYVPVVVLSNNDGCIISRSNEAKALGIKMGMPFFQAQD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ V +SSNY LYADMSNRVM L LS EIYSIDE+F + N ++ G Sbjct: 61 LIKKNNVHVYSSNYPLYADMSNRVMQLLAHLSQDQEIYSIDESFLKI----NQKNYLLHG 116 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD-LSNLERQRKLMSAL 179 + IRAT+L+ L V VG A+TKTLAKLAN+ AKK+ G V SN + KLM + Sbjct: 117 QHIRATILKNVGLPVCVGFAKTKTLAKLANYMAKKYPMFNGVVCFSESNPKTLTKLMCEI 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V ++WG+G R+ K+L+ +GI TV DL + +++++ F++ +ER V EL C +E Sbjct: 177 SVGELWGVGVRLKKRLNELGILTVHDLKTANAKWMKQMFSINIERMVYELNDIQCYPIES 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P +++I+CSRSFG++I Y M A+ ++ RA+ KLR + + ++ F++ +PF+ Sbjct: 237 IKPDQKQIVCSRSFGQKINRYEDMADAVATFVQRASIKLRKQQLTAKQMTLFMRNNPFSS 296 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 ++ T + ++ A L+ I+ G Y KAG++LGD N Sbjct: 297 KHRMQHVIR-LQHYDYTDSHQQLLRLAMHGLEKIYHQGIDYHKAGIILGDLRRAT----N 351 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 L D + +P L +D + K + Q +W M++ S ++TT +LL Sbjct: 352 LNQDYSAKPEGHHLSNTIDAIRDKYHANIIMSGWQSKDGKWHMRQLNKSLKFTTSWLELL 411 Query: 420 RV 421 Sbjct: 412 EA 413 >UniRef50_A6GF38 DNA-directed DNA polymerase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GF38_9DELT Length = 409 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 107/423 (25%), Positives = 178/423 (42%), Gaps = 27/423 (6%) Query: 7 VNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 ++AF+AS E P L GKPV+V G V A + EA+ G P + + Sbjct: 1 MDAFFASIEQRDDPRLRGKPVLVGHAGKRGVVAAASYEARRFGCHSAQPMAVARRRCPQA 60 Query: 66 GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG-REIR 124 V +E+Y +S + LE +P VE SIDEAF D++G + IR Sbjct: 61 --VIVPGRHEVYLGVSAELFEILEGFTPVVEGLSIDEAFLDMSGTQRLHGPPRVAAERIR 118 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 TV +R LT VGIA K +AK+A+ K + + R+R + LPV ++ Sbjct: 119 QTVAERLRLTCSVGIASAKFIAKIASDQDKPDG------LTVVEPGRERAFLHRLPVREL 172 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK 244 WG+G R + L+ G++T+ D+A+ + + + + G + + Sbjct: 173 WGVGPRTQEVLERYGVRTIGDIAELGLETLERDLGEHGRHLHQLSVGVDPRPVSPGR-ER 231 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 +++ +FGE + P + + + R A++L ++ + R + ++ + F Sbjct: 232 KQVSHENTFGEDLRSRPEIEDWLLRQSTRVADRLVAKGLHGRKVHLKLRDASFT------ 285 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH----RYQKAGVMLGDF-FSQGVAQLN 359 + L PTQ++R I A LD + G R + GV + DF QL Sbjct: 286 TWTRQCSLDEPTQEARVIFARARALLDRLEAEGKLRALRIRLTGVGVSDFRRDAPARQLE 345 Query: 360 LFD-----DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 L + A E + V+ + + G L AG G ++ A P +TR Sbjct: 346 LLPVEGAAEPATDDRGEAVQDVLSEVRRRFGGKALGLAGVGGIRREARDDAGAVPDLSTR 405 Query: 415 SSD 417 D Sbjct: 406 IDD 408 >UniRef50_C6WDG0 DNA-directed DNA polymerase n=8 Tax=Actinomycetales RepID=C6WDG0_ACTMD Length = 430 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 101/402 (25%), Positives = 164/402 (40%), Gaps = 24/402 (5%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E RP+L PVVV + G V + N A+ GV+ P + L Sbjct: 31 LHVDMDAFYASVEIRDRPELARLPVVVGGTAHRGVVASANYLAREFGVRSAMPTAHARRL 90 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDF 119 V ++ Y D+S VM +++P VE S+DEAF D+ G + Sbjct: 91 APHA--VFLPPDFTKYRDVSRGVMELFRQVTPLVEPLSLDEAFLDVGGALRRLRATPAEI 148 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +R V + +T VG+A TK LAKL++ K + + +R + + L Sbjct: 149 AARVRVDVEREHGITCSVGVASTKFLAKLSSGMCKPDG------LMVVPKDRALEFLHPL 202 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 PV +WG+G+R +++LD +G++TV D+A + +RK V E RG + Sbjct: 203 PVGALWGVGKRTAEQLDRLGLETVGDVAAAPLLRLRKAVGVALAEHLYALARGHDDRPVV 262 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + I +F D ++ + + R A LR++ R +S ++ + F Sbjct: 263 PYTRE-KSIGAEETFEVDHFDRAVLKLELLRLSERTAASLRAKGLRGRTVSIKVRFADFT 321 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-QGVAQ 357 + S L T +R++ AT LD G + GV + Q Sbjct: 322 ------TITRSKTLRVATDVAREVYATATSLLDDHVPPG-AVRLIGVRVEQLSEGAAGEQ 374 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 L FD G + D + G + A Sbjct: 375 LA-FDAPER--GWREAEQAADQARTRFGTAAVRPASLLSTAP 413 >UniRef50_A6EED8 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Pedobacter sp. BAL39 RepID=A6EED8_9SPHI Length = 417 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 151/422 (35%), Positives = 225/422 (53%), Gaps = 5/422 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFA D+N Y SCE +FRP+L + VVVLSNNDGCVIAR+ EAKA+G+KM D F ++ Sbjct: 1 MFAHVDINNCYVSCERLFRPELERRVVVVLSNNDGCVIARSNEAKAIGIKMADAEFIVRE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + V FSSNY LYADMS R+M+ L + + +YSIDEAF L G DL+ Sbjct: 61 RLKESNAVIFSSNYALYADMSARLMNNLARYTYTLMVYSIDEAFMAL-GNIKGIDLSQHA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 I V + T L + VG+ T +LAKLAN AA ++Q + L E+ ++ P Sbjct: 120 ATISNNVFRDTGLPITVGVGPTLSLAKLANKAA---KKQGRNFMVLDTEEKINAMVQTFP 176 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++DVWGIG KL + I+T D F+RK V R +EL G PC +++ Sbjct: 177 IEDVWGIGMAYYNKLREINIQTAHDFRSLKADFVRKQMTVQGWRLHQELWGIPCNVIKDV 236 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A + I S+SF T + +A+ +A A KLR + ++ +++T+ + Sbjct: 237 AERSKGIESSQSFNTYQTTLEKVEEAVAMHAGTVALKLRQQKSMALNLTVYLRTNKHNVK 296 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 Y S +VK+ ++ ++L AIWQ G+ Y K GV +G Q NL Sbjct: 297 HDQYYPSLTVKIPFAANSVHELTQVCVQALRAIWQPGYNYLKTGVRATGIIPEGEVQNNL 356 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F++ E + ++D +N + GRGTL +G + W+MK+ LS +YTT ++++ Sbjct: 357 FNEYDNSRKQE-ISKLLDQINDRYGRGTLRLGVEGFDKTWKMKQDYLSRQYTTNWAEIIV 415 Query: 421 VK 422 + Sbjct: 416 TR 417 >UniRef50_C5D272 DNA-directed DNA polymerase n=5 Tax=Geobacillus RepID=C5D272_GEOSW Length = 414 Score = 390 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 92/368 (25%), Positives = 163/368 (44%), Gaps = 22/368 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAK-ALGVKMGDPWF 56 + D N+F+ASCE P L GK VVV + G V+A N AK G+ P + Sbjct: 11 VIFHVDCNSFFASCEIARDPSLKGKAVVVAGDPKERKGVVLAANYIAKQRFGIYTTMPLW 70 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + K + +V ++ LY ++S +V L +P +E SIDE + D+T + Sbjct: 71 EAKKRCPQ--LVVLKPDFHLYREISEKVFQFLATFTPVLERASIDEGYLDITDCYSLGSP 128 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 D +I+ +LQ H+ V +GIA K LAK+A++ K + + K++ Sbjct: 129 LDIAEQIQKELLQTLHIPVSIGIAPNKFLAKMASNMKKPLG------ITVLRKRDVPKVL 182 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV ++ GIG + +KKL+++GI T+ +LA + ++ + R G Sbjct: 183 WPLPVQEMHGIGDKTAKKLNSIGIFTIGELAKAEKVTLQNLLGITGVRLKEWANGIDPRP 242 Query: 237 LEEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ + K + I S + +T+ + + + A + +++ + + I+ S Sbjct: 243 VDPESGEKWKSIGSSTTLPRNVTEERILLEVLRDLAQSVSNRMKQKGVVSSTVQIMIRYS 302 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF--FSQ 353 F + S P Q++ +I A L W G+ + G+ D + Sbjct: 303 NFQ------TITRSKTWENPFQEAEEIFQRAVYLLKRHWN-GNPVRLLGITAVDVFDKKE 355 Query: 354 GVAQLNLF 361 V QL+LF Sbjct: 356 AVKQLDLF 363 >UniRef50_C5BW73 DNA-directed DNA polymerase n=4 Tax=Actinomycetales RepID=C5BW73_BEUC1 Length = 415 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 104/403 (25%), Positives = 172/403 (42%), Gaps = 22/403 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E + PDL G+PV+V + G V+A EA+A GV P + + L Sbjct: 23 ILHVDMDAFFASVELIRAPDLRGRPVIVGGEHRGVVLAATYEARAFGVHSAMPMTRARAL 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDFG 120 + V ++ Y ++S VM L +++P +E S+DEAF D++G R Sbjct: 83 CPQA--VVIPPDHARYEEVSRVVMGLLADVTPVLEQVSVDEAFLDVSGARRRLGSPVAIA 140 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR+ + + + VG+A TK LAKLA+ AK + L + +LP Sbjct: 141 TAIRSRIREVAQIPASVGVASTKFLAKLASQTAKPDG------LLLVPEAASVPFLHSLP 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEE 239 V +WG+G R + +L GI++V LA T +++ R + Sbjct: 195 VGALWGVGERTAAQLREWGIESVEQLAHTPPDVLQRRLGRAGGARLYDLAWNRDPRPV-T 253 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 A ++ I +F +TD + + + A R A +LR R ++ ++ S F Sbjct: 254 VARVEKSISSEHTFVTDVTDAAELGRTLLEQAHRCARRLRRGGFLARGVTIKVRMSDFT- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV--AQ 357 + S +L P+ + D+ AA L A+ + GV + + Q Sbjct: 313 -----TLTRSRQLDHPSDVAHDVYAAARALLAAVTIPRDGVRLLGVRVDQLTAAAATPVQ 367 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW 400 L L DD AP ++ MD + + G L A + Sbjct: 368 LALDDDAAP---RREVEVAMDDVRDRFGADALGAASLLATSAF 407 >UniRef50_Q31B23 DNA-directed DNA polymerase n=7 Tax=Prochlorococcus marinus RepID=Q31B23_PROM9 Length = 428 Score = 390 bits (1002), Expect = e-107, Method: Composition-based stats. Identities = 154/422 (36%), Positives = 233/422 (55%), Gaps = 6/422 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FYASCE P L KPVV+LSNNDGC+IAR+ EA+AL +KMG P+FK K+ Sbjct: 9 IALIDANNFYASCEQTINPHLRNKPVVILSNNDGCIIARSPEARALKIKMGTPYFKVKEK 68 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + V SSNY LY DMS R+M+ L++ ++EIYSIDEAF ++ N ++L + R Sbjct: 69 LNKLDVAVLSSNYSLYGDMSRRLMNLLKKYCEQIEIYSIDEAFVSISR-PNDKNLYPWAR 127 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 IR+ + Q +T+ VGI + K AK+AN AK + G+ DLS + + + V Sbjct: 128 NIRSLIYQNLGITLTVGIGENKVRAKIANKLAK-NIDYSAGIFDLSRTRNENNYLKRISV 186 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 D++WG+G++ S L + GIK +L D + I K +V +R EL+G CL LE+ Sbjct: 187 DNIWGVGKQTSNWLKSKGIKNARELRDMEENEIIKKLGIVGKRLQLELKGYKCLPLEKSK 246 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 +K+EI SRSFG IT + QA+ ++A +A+EK+RS++ I F +TS ++ Sbjct: 247 KSKKEIQVSRSFGTPITKLEDLTQALATHAIKASEKMRSQNLQSSDIRVFARTSKYSSQN 306 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 Y SA KL T D+ I+ I+ +++ KAGV++ D + Q ++ Sbjct: 307 --YQRSAHRKLTNATDDTNSILKIVVELSKEIYNPEYKFSKAGVLMQDLTNSEYLQQSVI 364 Query: 362 DDNAPRP--GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 + + + S LM +D LN + + +A Q+ W+M + LS TT + Sbjct: 365 NYKSQKDLKKSATLMRTIDLLNKRFNNNAITWAITKTQKSWKMNKNFLSRSSTTDIEQIP 424 Query: 420 RV 421 + Sbjct: 425 TI 426 >UniRef50_A6WU94 DNA-directed DNA polymerase n=28 Tax=Gammaproteobacteria RepID=A6WU94_SHEB8 Length = 418 Score = 389 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 179/423 (42%), Positives = 251/423 (59%), Gaps = 7/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N+FY S E VFRPD GKP++VLSNNDGC++A N +AK GV P+F+ KD Sbjct: 1 MFALVDANSFYCSAEQVFRPDWRGKPMIVLSNNDGCIVAANKQAKERGVPKFAPYFQVKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDF 119 L + GV+ SSNYELYAD+S ++M+ + +P +YSIDE+F + L Sbjct: 61 LCTKLGVIVCSSNYELYADLSAKMMNIIGRFAPEQHVYSIDESFLSFKNSYPAIKCLQAQ 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G+ IR V + T L V VGI T TLAK ANHAA K GV + N + + ++ ++ Sbjct: 121 GQLIRKAVWKETRLPVCVGIGSTLTLAKAANHAA-KKLPGYQGVCAIDNEQDRISILQSM 179 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V+DVWGIGRRISKKL+ M ++T DLA RK F++ +ERTVREL G+ C +E Sbjct: 180 SVNDVWGIGRRISKKLELMNVRTAYDLAKIPAGLARKQFSIEIERTVRELNGQACKVWDE 239 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 K++I +RS GERIT+Y + QA+ + A AA K R + C+ + F SP+ Sbjct: 240 ARADKKQIFSTRSVGERITEYEDLLQALSKHVAIAAAKARKQGSSCKTMLLFASNSPY-- 297 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 +E G V T S ++I T++ +++AG RY K GV L D S QL+ Sbjct: 298 DERPTGFKTLVHFACATDCSIELIQGMTQAASQLFRAGVRYYKVGVGLIDLVSTQHGQLD 357 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 LF+ + +P LM +D +N + G TL+ A QGI+Q+W M+R +L+P+YTT+ L Sbjct: 358 LFNVSKAKP---ALMKTLDGINQRYGTDTLFIAAQGIEQKWAMRRDLLTPQYTTKWKCLP 414 Query: 420 RVK 422 +K Sbjct: 415 EIK 417 >UniRef50_C8WRW0 DNA-directed DNA polymerase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRW0_ALIAD Length = 409 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 90/404 (22%), Positives = 154/404 (38%), Gaps = 26/404 (6%) Query: 7 VNAFYASCETVFRP-DLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 +NAFYASC P GKP+ V + G V+ + EA+A GVK P + Sbjct: 1 MNAFYASCHAAVDPARYAGKPIAVAGDPSTRHGIVVTASYEARARGVKPPMPVHQALARC 60 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 ++ ++ LY + +V + + E +P VEI SIDE + D+T V R Sbjct: 61 PE--LIVVRPDFHLYRAYARKVFAIVREFTPDVEIVSIDECYADVTHVPGGDRPVHLARA 118 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 I+A +L L +G+A K LAK+A+ K E R L+ L ++ Sbjct: 119 IQARLLDSLGLPSSIGVAPNKFLAKMASDMKKPMGITEL------RSENIRSLLWPLAIE 172 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 + G+G +K+L +GI T+ DLA + + + G LE Sbjct: 173 HMHGVGPSTAKRLRRLGILTIGDLAVQSLDVLARALGPRAAELKARANGIDPRPLETEPQ 232 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 + + S + + + + + R A ++R R ++ ++ + Sbjct: 233 PPKSVGHSMTLAKDAQTFAEVEGVVMDLCDRVASRMRRYGLMGRVVAVAVRDRRMRTSR- 291 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG--VAQLNL 360 L T + + ++ AA IW + GV + + QL+L Sbjct: 292 -----HQDTLATYVRHTGELFQAARALFQRIW-PTEPVRLLGVSVEGLVPRDGQGVQLHL 345 Query: 361 FDD-----NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +D E+L +D + AK G + Q+ Sbjct: 346 WDAVPTAGEPRDERLEKLERAIDEVRAKFGPSAIRLGRSLSGQR 389 >UniRef50_C7NIB1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NIB1_KYTSD Length = 407 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 94/408 (23%), Positives = 161/408 (39%), Gaps = 22/408 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS V RP+L G+PV+V + V++ EA+A GV+ P + + L Sbjct: 12 VLHVDMDAFYASVALVDRPELRGQPVIVGGGHRSVVLSATYEARAFGVRSAMPMARARRL 71 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTDFG 120 + ++E YA +S VM +++ V+ S+DEAF D+TG R Sbjct: 72 CPQAT--VVRPDHERYAAVSAAVMEIFRQVTHAVQPTSVDEAFLDVTGTSRRWGSPLQVA 129 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR TV H+T VGI +AK+A+ AK + + L Sbjct: 130 EWIRRTVAAEQHITCSVGIGPNPFVAKVASGQAKPDGTRQ------VTPAEVVSFLHPLD 183 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 V +WG+G + ++L G+ TV +A T + +++ G ++ Sbjct: 184 VGVLWGVGEKTQEQLARFGLTTVAQVAHTPVVTLQRIVGDHAGAALAERAWGRDPQRVRP 243 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I ++F I D + + + R A + R+ R + ++ + F Sbjct: 244 VVAE-KTIGNGQTFDHDIDDPRQVETRLLLLSDRVAARARTAGVMGRTVQVTVRFADFT- 301 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG--VAQ 357 S L P+ SR+I A ++ R + V L Q Sbjct: 302 -----TVQRSRTLQRPSDVSREIHQVAREVFASLGLQRARVRMVRVTLSGLTPTDRTPRQ 356 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 L + P G + +D +A+ G G + A +++ RA Sbjct: 357 GML---DEPEVGWREADAAVDRASARFGAGIVRPASLLPEERGPRGRA 401 >UniRef50_D1VXB9 Putative DNA polymerase V subunit UmuC n=1 Tax=Prevotella timonensis CRIS 5C-B1 RepID=D1VXB9_9BACT Length = 440 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 167/432 (38%), Positives = 249/432 (57%), Gaps = 14/432 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 +A+CD ++ Y SCE VFRPDL KPVVVLSNNDGCV+AR+ EAK +G+ G P+++ K+ Sbjct: 12 YAICDCDSCYVSCERVFRPDLKHKPVVVLSNNDGCVVARSKEAKRMGIPAGMPYYQLKEQ 71 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + + FSSNYELY +++ RVM + E SP+ YSIDE FC L + + DL +G Sbjct: 72 YHDNEIAVFSSNYELYGELTARVMQLIREASPQSVRYSIDECFCVLPDM-SFTDLKQWGE 130 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 + +L+ T + + +GIA TKTLAK+A+H AKK++ + E++ K + P+ Sbjct: 131 SLCHRILKYTGMPISIGIAHTKTLAKMASHYAKKYEGYQHC-CIIDTDEKRTKALQQYPI 189 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +VWGIGRR + KL++MGI++ D A D +IR F VV RT +EL GE C+ ++E Sbjct: 190 SEVWGIGRRHATKLESMGIRSAYDFAMHDKSWIRSLFTVVGMRTWQELWGEDCVPIDEMT 249 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 K+ I SRSF + +Y ++R I ++AAR A KLR + +S F+ T+ F + Sbjct: 250 H-KKSICTSRSFTGMLAEYDAVRTHIANFAARCAYKLRQQQSVASVVSVFVHTNRFREDL 308 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 Y NS SV+LLTP+ ++ I+ AA + L I+ +G++Y+KAGV++ S Q N Sbjct: 309 DQYWNSTSVQLLTPSNSTQVIVQAAAQGLQHIFASGYQYKKAGVVVMGLQSDAAIQTNFL 368 Query: 362 D-DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ----------QWQMKRAMLSPR 410 D +L V+D LN G T+ Q +Q ++ S Sbjct: 369 DFHATQMEKHIKLDQVVDRLNKLMGTETVKLGAQQYKQKQQNGKAIVFADAIQHVFKSKN 428 Query: 411 YTTRSSDLLRVK 422 TTR SD++ +K Sbjct: 429 PTTRWSDIMELK 440 >UniRef50_D1PR84 DNA-directed DNA polymerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR84_9FIRM Length = 415 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 96/412 (23%), Positives = 161/412 (39%), Gaps = 25/412 (6%) Query: 1 MFALCDVNAFYASCETVFRP------DLWGKPVVVLSN---NDGCVIARNAEAKALGVKM 51 ++ DVN+ + S + + DL P V + G V+A+++ AK GV+ Sbjct: 4 VYFHVDVNSAFLSWSALKKLRAGETLDLRTVPSAVGGDEEKRHGVVLAKSSPAKKFGVRT 63 Query: 52 GDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR 111 G+ F + ++ +++ Y S +++ L + +P VE YSIDEAF D+TG Sbjct: 64 GESLFSARLKCPE--LIVTPPDFDFYVQNSKALIAILRDYTPDVEQYSIDEAFLDMTGTE 121 Query: 112 NCRDL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 IR V + TV +G+A + LAK+A+ K + V L E Sbjct: 122 ALFGPPLTVAHTIRNRVREELGFTVNIGVASNRLLAKMASDFEKPDK-----VHTLFPEE 176 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 K M LPV ++G+G K+L+ GI T+ DLA T+ R I F + Sbjct: 177 VPDK-MWPLPVGSLFGVGPSAVKRLNQCGIYTIGDLARTERRVIVGIFGTRGDTLWNYAN 235 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G + + S + + +T + + +LR++ + R ++ Sbjct: 236 GREADPVTKQTTRDNTYGNSVTLPQDLTRPEQADATLLALCDSVGRRLRTDGKTARVVTV 295 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 + + F S L PT + + A + + +W G + GV Sbjct: 296 QLVDNAFR------RTSHQRTLPDPTNSTDRLYEVALQLMRQMW-PGRPVRLVGVSAEKT 348 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 + QL+LF D R E+L D L K G + A Sbjct: 349 GTDNFEQLDLFTDTTRRQKQEKLDRTADALRRKFGGAAVTRAKLLTPDTRAP 400 >UniRef50_A1WY69 DNA polymerase IV n=47 Tax=Bacteria RepID=DPO4_HALHL Length = 356 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 82/367 (22%), Positives = 145/367 (39%), Gaps = 19/367 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P L G+PVVV + G V A + EA+A G++ P + Sbjct: 6 IIHIDMDAFYASVEQRDDPSLRGQPVVVGGSPEGRGVVAAASYEARAFGIRSAQPAAWAR 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 + ++ Y +S ++ + + +E S+DEA+ D+TG + R T Sbjct: 66 RRCPEA--IFLRPRFDRYRAISRQIHGIFADFATTIEPLSLDEAYLDVTGSQRFRGSATH 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + IR + + T LT G++ K LAKLA+ K + + E ++A Sbjct: 124 MAQAIRRRIREETGLTASAGVSYNKLLAKLASDEGKPDG------LYVVPPEDGPAYVAA 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ + G+G + +L+ +GI+ V DL D ++ + RG + Sbjct: 178 QPIRRLHGVGPATAARLERLGIRQVGDLLDWELADLHVFLGNRAGTLHDAARGIDHRPVR 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 +++ I R+FG+ D + Q + + A +L R ++ ++ + F Sbjct: 238 P-RRSRKSIGAERTFGDDTRDLGEIHQRLAPLITKVATRLEHHELVARTVTLKLRYADFE 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + V P + DI L + GV L + Q Sbjct: 297 ------SITRRVSPPGPVAQAADIEALIPALLAETEAGSRPVRLLGVSLSGLQPKQREQ- 349 Query: 359 NLFDDNA 365 +LF Sbjct: 350 DLFSALT 356 >UniRef50_Q3B3L9 DNA-directed DNA polymerase n=2 Tax=Chlorobium/Pelodictyon group RepID=Q3B3L9_PELLD Length = 432 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 191/423 (45%), Positives = 254/423 (60%), Gaps = 6/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE VF P L G+PVVVLSNNDGCVIAR+ E+KALG+ MG P F+ +D Sbjct: 1 MFALADCNNFYVSCERVFNPMLCGRPVVVLSNNDGCVIARSEESKALGIAMGTPLFRCRD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + R GV FSSNY LY DMS+RVM+TL ++P E YSIDEAF DL+G R L + Sbjct: 61 VIGRHGVAVFSSNYPLYGDMSSRVMNTLGAMAPEQERYSIDEAFFDLSGFRRF-GLREHA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +R TVL+ T + V +GIA TKTLAKLA AAKK GGV+ L +R R+ +++ Sbjct: 120 ALMRRTVLKHTGIPVSIGIAHTKTLAKLAAKAAKKD-PSCGGVLMLEGADRVRRALASTH 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++DVWGIGR+ S KL GI+T D A +R+ V + EL+G CL LE Sbjct: 179 LEDVWGIGRQWSLKLALQGIQTAADFAGMPPALVRRLLGVTGAKVQAELQGHRCLPLELV 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P KQ I SRSFG + +++A+ S+A+RAA KLR E ++ FI TSPFA + Sbjct: 239 RPMKQTICTSRSFGRNVFSVEELQEAVASFASRAASKLRREGSTASLLTVFISTSPFAAS 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV--AQL 358 S +V L D+ ++ AA+R L+AI+Q GH Y+KAGV+LG + Sbjct: 299 ALRREASRTVSLPRAADDAMTLVTAASRVLEAIYQGGHPYRKAGVLLGAIAPKNPPGESF 358 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 LF D +E L VM+ +N + G G++ A + + W+ +SPRYTT ++ Sbjct: 359 LLFGD-EGEGRAEALQQVMEQVNLRYGNGSIRLAAE-DSRAWEPLCRHISPRYTTSWEEI 416 Query: 419 LRV 421 LRV Sbjct: 417 LRV 419 >UniRef50_B8G1R4 DNA-directed DNA polymerase n=2 Tax=Desulfitobacterium hafniense RepID=B8G1R4_DESHD Length = 423 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 102/404 (25%), Positives = 168/404 (41%), Gaps = 21/404 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFKQ 58 L D N++YASC P+L GKP++V N G ++ + EA+ GVK P F+ Sbjct: 16 IVLFDANSYYASCHQAVNPELQGKPLLVAGDPRNRTGIILTASYEARFYGVKTAMPLFQA 75 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGV-RNCRD 115 L V S ++ LY D+S ++ +E + +E+ S+DE F D G Sbjct: 76 LKLCPEA--VVLSPDFRLYLDLSRKMWEIVERYTDEDHIEVVSVDECFADFRGSHLLFGS 133 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK--KWQRQTGGVVDLSNLERQR 173 + R ++ +L+ L V VG++ K AKLA+ + K + + + Sbjct: 134 TEEIARRVQKEILEELGLGVSVGVSYCKIFAKLASDYQRDPKTRVKLPRSFTVIAPGELE 193 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + L V ++ GIGR+ K+L +GI+T+ DLA + +RK F V + G Sbjct: 194 SKVWPLGVGELSGIGRQTEKQLADLGIRTIGDLAQASPQALRKGFGVYGAKLYAWANGRD 253 Query: 234 CLQLEEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + K I S + + ITD + + A K+R E + ++ + Sbjct: 254 ERPVTPEDQAKDHSIGRSITLPQDITDPEQGTEVLLFLADSVGRKVRREETKAQTLTVQV 313 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 K + F + S L PT + I + + L W G + G+ Sbjct: 314 KDAEFK------TRTYSTTLFEPTDSTDVIYRESLKLLAK-WPQGKPIRLLGLTASRLQ- 365 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 +G+ QL+LF +L +D L K G G L Q + Sbjct: 366 KGIEQLSLF--QEESEEQTELDRTVDELRDKYGSGILMRGTQYL 407 >UniRef50_C9LBG3 DNA polymerase IV n=6 Tax=Clostridiales RepID=C9LBG3_RUMHA Length = 426 Score = 387 bits (996), Expect = e-106, Method: Composition-based stats. Identities = 101/410 (24%), Positives = 175/410 (42%), Gaps = 26/410 (6%) Query: 1 MFALCDVNAFYASCETVFRPD------LWGKPVVVLSN---NDGCVIARNAEAKALGVKM 51 + DVN+ + S E V+R + L P V + G ++A++ AKA GVK Sbjct: 7 VIFHIDVNSAFLSWEAVYRLEQGGTVDLREIPCAVGGDKTKRRGIILAKSLSAKACGVKT 66 Query: 52 GDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR 111 G+P + ++ S+++ +Y S + ++ L E SP VE YSIDEAF D+TG+ Sbjct: 67 GEPLTEALKKCPS--LIVVSAHHSMYRQYSQKFLNILREYSPSVEQYSIDEAFMDMTGME 124 Query: 112 NC-RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + F +++ + + TV +GI+ K LAK+A+ K + V L E Sbjct: 125 KLIGNPVAFAHKLKNRISKELGFTVNIGISGNKYLAKMASDFEKPDK-----VHTLFPTE 179 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 + M LPV D+ +GR ++ L +GI T+ DLA+TD+ ++ H E Sbjct: 180 -IKTKMWPLPVSDLLFVGRATTQVLKKLGIYTIGDLANTDVEILKCHLKKQGESIWNFAN 238 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G +E + + S + +TD + + + S A +LR + +S Sbjct: 239 GRDTSLVESESQGNKGYGNSTTIAFDVTDEGTAKMVLLSLCETVAARLRKDDVKAEVVSV 298 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 ++ F S + PT + +I + D +W G + GV Sbjct: 299 SVR--DFE----MKTVSHQRVMAAPTNITGEIYDTVCVLFDELWD-GMPIRHLGVHTSRV 351 Query: 351 FSQG-VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + Q++LFD N E++ +D + K G + A ++ Sbjct: 352 SKEERGRQMSLFDLNTNYEKMEKMDMAVDKIRKKFGNNAIMRASFLDNKK 401 >UniRef50_Q2P505 Polymerase V subunit n=4 Tax=Xanthomonadaceae RepID=Q2P505_XANOM Length = 428 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 180/432 (41%), Positives = 242/432 (56%), Gaps = 17/432 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FYASCE VF+P+L G+P+VVLSNNDGC IAR+ EAKALGV MG P K Sbjct: 1 MFALIDGNNFYASCERVFQPELRGRPLVVLSNNDGCAIARSDEAKALGVTMGQPIHKVPT 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 RR + S+N+ LY D+++R+ L + +PRVE+YSIDE+F DL G+R D Sbjct: 61 QIRR-RLALRSANFGLYGDIASRIGVILRQAAPRVEVYSIDESFLDLAGIR---DRRQLA 116 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG-------GVVDL--SNLER 171 ++R V Q T + +GIA TKTLAKLAN AK R+ G GV DL + Sbjct: 117 VDLRERVYQWTGIPNCIGIAPTKTLAKLANRVAKDAARKPGSYPADLAGVCDLAALSASE 176 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 ++ A V D+WG+GRR S +L A G+ T DL D + F VV+ R REL+G Sbjct: 177 LDAVLRATSVGDLWGVGRRWSARLQARGVYTAADLRDAAADDLLAEFGVVMARAQRELQG 236 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 CL+LEE P +Q+I+ SRSFG +++ M +A+ ++A RA EKLR+ I F Sbjct: 237 HACLELEEVEPDRQQIMVSRSFGTWVSNPQDMSEALATFAMRATEKLRARGLTSSAIGIF 296 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 T F P + S + L + T DSR ++ R + G Y+KAGV L D Sbjct: 297 ADTDSFKPGVPQHNPSRTAPLASATSDSRIVLTTVRRLFQGFMREGFAYKKAGVCLMDLA 356 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRAMLSP 409 Q +LF R G E+LM+ +D +N + GRGT G Q W ++ +LS Sbjct: 357 KPEDLQGDLFTP--ARIGHEKLMSALDAINRRFGRGTAGLGASGWQNSPSWASRQELLSG 414 Query: 410 RYTTRSSDLLRV 421 R+TT +DL R Sbjct: 415 RFTTSLADLPRA 426 >UniRef50_C7R3I3 DNA-directed DNA polymerase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3I3_JONDD Length = 413 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 99/398 (24%), Positives = 172/398 (43%), Gaps = 20/398 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E RP+L G+PV+V V+A + EA+ LGV+ P + + L Sbjct: 23 VMHVDMDAFYASVEIAQRPELRGQPVIVAGGERSVVLAASYEARELGVRSAMPTQRARLL 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFG 120 V + + YA +S VM L+ ++P VE SIDEA+ D++G+R + L+ Sbjct: 83 APHA--VWVAPRHHEYARISRSVMDYLDTITPWVEQVSIDEAYLDVSGIRGPQGTLSARA 140 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +E+RA V +T VG+A K LAKL + AK + + ++++ ++ LP Sbjct: 141 QELRAQVKAHHGVTCSVGVAANKFLAKLCSTQAKPDG------LLVLPRGQEQEFLNLLP 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEE 239 + + GIG + ++L G+ T+ D+A + ++ R + RG + Sbjct: 195 IGALMGIGDKSERRLKQHGLHTIRDVAALEPSYVVALLGATLGNRLIHLARGIDDRPVTP 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + +F + +R + S A +LRS R IS I+ F Sbjct: 255 TRVE-KSVGAEHTFAQDEGSREVLRATVRSLADTVTSRLRSRGLLARTISVKIRDVNF-- 311 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + V L +P+Q + + A +D G R + GV + L Sbjct: 312 ----HTITRHVTLHSPSQSLHVVFSQAWTLVDRQLLPGQRARLLGVRAEQLVPEEGQPLT 367 Query: 360 L-FDD--NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 L ++ + + +D + AK G + Q Sbjct: 368 LTLEESLTDHHDTTRKTEETIDAIRAKFGSRAISLGVQ 405 >UniRef50_A3DH61 DNA polymerase IV n=9 Tax=Clostridiales RepID=DPO4_CLOTH Length = 399 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 95/405 (23%), Positives = 160/405 (39%), Gaps = 21/405 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + CD+N FYAS E ++ P+L KPV V + G V+A+N AK VK G+ ++ Sbjct: 4 VILHCDLNNFYASVECLYHPELRDKPVAVCGSIEDRHGIVLAKNYAAKKYKVKTGETVWE 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDL 116 K+ G+V +N+ LY S E + RVE + +DE + D++ D Sbjct: 64 AKNKCP--GLVVVKANHSLYYKFSKYARQIYEYYTDRVESFGLDECWLDVSESTLLFGDG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 T EIR + + +TV VG++ K AKL + K V + ++ + Sbjct: 122 TKIANEIRERIKRELGVTVSVGVSYNKVFAKLGSDMKKPDA------VTVITENDFKEKI 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV+ + +G KKL+ M + T+ DLA+ F+ + G Sbjct: 176 WGLPVEALLYVGDSTKKKLNNMAVFTIGDLANCHSEFLVRQLGKWGYTLWSFANGYDTSP 235 Query: 237 L--EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + I S + +T+ +R I + E+LRS + R + IK Sbjct: 236 VAKNDCEIPIKSIGNSLTAPRDLTNNEDVRILIYVLSESVGERLRSHNLKGRTVQISIK- 294 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + L T + +I A W + GV + D Sbjct: 295 -----DPELQTLERQAGLDIHTSITSEIAQKAYEIFLKSWNWSKNVRALGVRVTDLVESD 349 Query: 355 V-AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 Q++LF D+ R E L +D + + G ++ + Sbjct: 350 TCTQISLFSDDIKRQKLEILDECVDRVRERFGYYSVRRGILLQDR 394 >UniRef50_C8NE97 DNA-directed DNA polymerase n=2 Tax=Granulicatella RepID=C8NE97_9LACT Length = 352 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 21/365 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+AS E P+ GKPV+V N G V + EA+A GV+ P K Sbjct: 4 ILHVDMDAFFASVEQREHPEWRGKPVIVGGKPNERGVVSTCSYEARAFGVRSAMPTAKAM 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTD 118 L + + NY LY ++S++V + + +E SIDEA+ D+T R T Sbjct: 64 KLCPKA--ILTPGNYSLYKEISSQVREVFKSFTNMIEPLSIDEAYLDVTNNSRGIASATL 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+ V ++T LT VG++ K LAK+A+ K + + E ++ + Sbjct: 122 VAHLIQKEVYEKTGLTCSVGVSFNKFLAKMASGYQKPSG------ITVITPENAQEFIRT 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 +P+ D +G+G+ ++KL GI+T DL + F + R ++RG QL Sbjct: 176 IPIGDFYGVGKVSAEKLRRAGIETGEDLLHLSKAELESRFGNLGPRLYAQVRGISNDQLT 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + ++ + R+ + TD+ + + + ++ A L+ R IS ++ S F Sbjct: 236 LYR-ERKSMGSERTLIKDTTDHGILSEYLEKFSLEIASMLQKRALASRTISLKLRDSNFN 294 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG--VA 356 S SV L +I+ A + + + + G+ + Sbjct: 295 ------TTSKSVTLRDYFNKKEEILQLALQLFEEMMDE-KPIRLIGLSVSHLEKTDKIYK 347 Query: 357 QLNLF 361 QL LF Sbjct: 348 QLKLF 352 >UniRef50_C7H2N6 DNA polymerase IV n=8 Tax=Bacteria RepID=C7H2N6_9FIRM Length = 411 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 88/403 (21%), Positives = 154/403 (38%), Gaps = 20/403 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + CD+N FYAS E + P+L KPV V + G V+A+N AKA GV G+ ++ Sbjct: 4 VILHCDMNNFYASVECMLNPELKNKPVAVCGSVEERHGIVLAKNYAAKAFGVSTGEAIWQ 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K +V +YE Y S + ++E Y +DE + D+TG Sbjct: 64 AKQKC--QDLVIVEPHYEQYMKFSKLAREIYGRYTDQIEPYGMDECWLDVTGSGCMGTGF 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + EIR TV LT+ G++ K AKL + K + + R+ + Sbjct: 122 EIADEIRRTVKFELGLTISAGVSFNKIFAKLGSDMKKPDA------ITCIEADSFREKIW 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 P D+ G+GR K L + GI T+ +LA T F++ + G + Sbjct: 176 CHPASDLLGVGRATEKVLSSYGIHTIGELAATSDDFLKCRLGKNGLVIKKYANGLDDSPV 235 Query: 238 --EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ + I + + + + + + KLR+ + I+ I+ + Sbjct: 236 MRSDYVSPVKSIGHGITTMQDLENNAEVWCVMLELVQEIGTKLRAHKKKAGGIAISIRNN 295 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG- 354 Y ++ PTQ + A +Q H + V + F + Sbjct: 296 E------LYTKEWQCRIGIPTQSPTYLAKTAFALFAKNYQWEHPIRSVTVRAINLFEEDC 349 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 Q +LF D E+L ++ + + G+ + + Sbjct: 350 PIQYDLFTDVKSLDRQERLDAAIEQIRFRFGKDAIKNGVLFQK 392 >UniRef50_Q18A91 DNA polymerase IV n=46 Tax=Bacteria RepID=DPO4_CLOD6 Length = 365 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 75/370 (20%), Positives = 145/370 (39%), Gaps = 21/370 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E L G+PV+V N + G V + EA+ G+ P Sbjct: 7 IIHIDMDAFYASIEQRDNKKLKGRPVIVGGNPQSRGVVATCSYEARKFGIHSAMPSAVAY 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 + V +++Y +S ++ + VE S+DEA+ D+T +N + Sbjct: 67 NRCPYA--VFVRPRFDVYKSVSEKIRDIFYRYTDLVEPLSLDEAYLDVTKNKKNIDSSIE 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++I+ + + LT G++ K LAK+A+ K + + E + + Sbjct: 125 IAKQIKKDIFREVGLTSSAGVSYNKFLAKIASDLRKPNG------LTVITEENAQDFLDK 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV+ +G+G+ S L +GIKT DL ++ + F + RG +E Sbjct: 179 LPVNKFFGVGKVTSNTLKNLGIKTGYDLRCLNLFELENIFKKRGYELYKFARGIDDRPVE 238 Query: 239 EFAPTKQEIICSRSFGERIT-DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + + + D R + +L++ ++ + ++ IK F Sbjct: 239 PNR-VRKSVGAETTLSHNLDIDEEETRNILDELCEEVCHRLKNSEKFGKTLTLKIKYEDF 297 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QGV 355 + S+ L + DI + L + G + + GV + + + Sbjct: 298 TK------ITRSLSLEHYIDEYNDIRSGVDNLLRNVEVNGKQIRLLGVTISNLSDKKETY 351 Query: 356 AQLNLFDDNA 365 + LF+ Sbjct: 352 KDITLFEYMD 361 >UniRef50_A0K1P6 DNA-directed DNA polymerase n=7 Tax=Bacteria RepID=A0K1P6_ARTS2 Length = 437 Score = 386 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 165/425 (38%), Positives = 230/425 (54%), Gaps = 11/425 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL DVN FYAS E F P L G+P+VVLSNNDGC + R+ EAKALG+ +G+PWFK Sbjct: 18 IALVDVNCFYASAERAFDPSLEGRPLVVLSNNDGCAVTRSPEAKALGIPVGEPWFKIAPR 77 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + G+V SSNYELY D+S RVM L S +E+YSIDEAF + G + +L G+ Sbjct: 78 AKEWGLVAKSSNYELYGDISARVMELLGRYSAWLEVYSIDEAFLGVKGTPD--ELLRLGQ 135 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMSAL 179 I+ V + + V VGIA TKTLAKLAN AK GV + LM + Sbjct: 136 TIKTAVRRNVGVPVCVGIANTKTLAKLANKWAK-NNPGLNGVCHWDSMPPPAREALMGRV 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V ++WG+ R++K+L+ MGI ++LDLA D IR F+VVL RTV EL+G C+ +E Sbjct: 195 SVIELWGVAGRLTKRLNNMGIHSILDLARADPVRIRDRFSVVLMRTVLELQGTACIPMEA 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + ++I SRSF IT +RQ + Y +A+ +L + ++ F TS + Sbjct: 255 ERIGRDQLIFSRSFSTPITTAADLRQVMSVYGQQASARLAKHSLQAKVLTAFAGTSHYNP 314 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + Y S V L PT D + AA L I + + AG+M+ D G Q + Sbjct: 315 LDTSY-PSVCVTLPMPTADPVLLTRAAHALLPRIQEGTKYVR-AGIMVTDLRPSG--QQS 370 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRAMLSPRYTTRSSD 417 A + +++ + + GRG++ GI+ W M+R MLSPRYTT ++ Sbjct: 371 PLPVFANPHEERGIGPLLEDITRRYGRGSVGLGHAGIRGGPDWSMQRTMLSPRYTTHWNE 430 Query: 418 LLRVK 422 L VK Sbjct: 431 LPVVK 435 >UniRef50_Q2RYM0 UmuC protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYM0_SALRD Length = 432 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 165/430 (38%), Positives = 224/430 (52%), Gaps = 13/430 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D FY SCE VF P L G+PV VLSNNDGCVIAR+ E K GV MG P FK ++ Sbjct: 4 VFALIDCENFYVSCERVFDPSLRGRPVAVLSNNDGCVIARSEEVKEAGVPMGAPLFKWRE 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 SSNY LY DMS RV S +EE + +E YSIDEAF G+ +L+ Sbjct: 64 ELDEIEAEILSSNYTLYGDMSRRVHSIIEEEALALERYSIDEAFARFPGLSRD-NLSRVA 122 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK--KWQRQTGGVVDLSNLERQRKLMSA 178 +R + + + V VG+ TKTLAK+A+ K K G + ++ +L+ Sbjct: 123 DRLRRRIRRHIGIPVRVGVGPTKTLAKVADLNGKARKRAGWGQGTYVCPDEPKREELLKR 182 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + V D+WGIG K L G+ + +IR VV RT ELRG CL LE Sbjct: 183 VSVGDIWGIGSAYEKTLQEKGVASAAGFRALPGPWIRSEMTVVGLRTAWELRGRSCLDLE 242 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 P ++ ++ SRSFGER+ ++R+A+ +A RAAEKLR E + I FI T F Sbjct: 243 LVRPDRKTMVRSRSFGERVETKANLREALAKHAQRAAEKLREEGLVAKGIKVFITTKRF- 301 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + P+Y N + L T + A+ R L+ I+++GH Y+KAGV L D Q Sbjct: 302 GDPPHYSNGVAGALPEHTARASAFAKASRRLLEPIYRSGHGYKKAGVCLYDIRPSRPHQE 361 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG-------IQQQWQMKRAMLSPRY 411 +LF E LM +D +N K G+G + A G ++++W MKR SP Y Sbjct: 362 SLFGQGRKED--EDLMEAVDQINRKHGKGAIGLAAAGLPEGKGHLEREWTMKRQRRSPLY 419 Query: 412 TTRSSDLLRV 421 TTR +L Sbjct: 420 TTRWDELPVA 429 >UniRef50_C6NY09 DNA polymerase IV n=2 Tax=Bacteria RepID=C6NY09_9GAMM Length = 390 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 88/369 (23%), Positives = 149/369 (40%), Gaps = 23/369 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+A+ E RP+L G PV+V N G V + EA+ G++ + + Sbjct: 31 IIHVDMDAFFAAVEQRDRPELRGLPVIVGGDPNVRGVVATCSYEARRFGIRSAMSAARAR 90 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + + + Y ++S +VM+ L + VE S+DEAF D+T + Sbjct: 91 SLCPQA--IFVRPRMDAYREVSRQVMTILRSYTALVEPLSLDEAFLDVTAATTDGTLAVE 148 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REI + + T LT G++ K LAKLA+ K + + ER ++ Sbjct: 149 IAREILDRIHRETGLTASAGVSYNKLLAKLASDWRKPHG------LFVIPPERGLAFLAP 202 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G KKL AMG++TVLDL + + F+ HF R ++ Sbjct: 203 LPVGKLHGVGPATVKKLSAMGVETVLDLRNLSLEFLVTHFGKSGGWFYDVARAIDERPVQ 262 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F + + D M + AA+ A +L+ H + + F Sbjct: 263 PSR-QRKSVGTERTFSKNLADRSVMLTTLQEMAAQVAARLQVLHLAGHTVHIKARFPDFT 321 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-----SQ 353 + + + I LD + G+ + S+ Sbjct: 322 ------TVTRAYTATEGIGSADAIAAWLPELLDRAVPKSTSVRLLGITMSGLVNVLAASR 375 Query: 354 GVAQLNLFD 362 Q+NL D Sbjct: 376 VAHQMNLLD 384 >UniRef50_A6DHJ1 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHJ1_9BACT Length = 415 Score = 385 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 164/421 (38%), Positives = 227/421 (53%), Gaps = 15/421 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FYASCE F P L G+ +V+LSNNDGCVIAR+AEAKALG++MG P+F+ + L Sbjct: 10 IALADCNNFYASCERCFNPQLIGRAIVILSNNDGCVIARSAEAKALGIQMGVPFFEIRPL 69 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 GV+ +SSN+ LY D+S RVM L + +E YSIDEAF L + Sbjct: 70 VEMHGVLAYSSNFPLYGDLSARVMQLLHVHAQEIEFYSIDEAFFTL---PTTHCPESYCT 126 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 I+ V Q T + + +GIA TKTLAK+A+ AKK + L +++++ + Sbjct: 127 SIKEQVQQCTGIPISIGIASTKTLAKIASKLAKKSRGTF-----LIQEANRQQVLENTLI 181 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +D+WGIGRR+SK+L GI+T LA D +++ K F V + RT ELRG P L LE Sbjct: 182 EDIWGIGRRLSKRLQNCGIRTAWQLAMADEQYLLKRFGVCMLRTSHELRGIPSLALENSP 241 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 KQ I SR+F E + D S+ Q + +A RA +KLR E Q ++ T Sbjct: 242 EAKQSIRVSRTFPESVHDLDSLLQQLSFFADRACQKLRQEQQKA----LYVDTFIEGPYP 297 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 S L +P+ + D I+A S ++ +KAGV L F S+ Q + F Sbjct: 298 TRKHRSTRFYLDSPSDYTPDFIHAVELSGQKLFHHC-EIRKAGVTLHHFSSKNAWQQDFF 356 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 LM D++N K G+G+L F G ++ + A LSPRYTT +DL V Sbjct: 357 SLPRDHQKQNTLMQQFDSINQKFGKGSLRFLSSGKRE--FSRGARLSPRYTTSWNDLALV 414 Query: 422 K 422 K Sbjct: 415 K 415 >UniRef50_C4G590 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=C4G590_ABIDE Length = 447 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 87/418 (20%), Positives = 158/418 (37%), Gaps = 36/418 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D N FYAS E + P+L GKPV V N G V+ + AK GVK G ++ Sbjct: 23 ILHSDCNCFYASVELLHHPELRGKPVAVGGNPEARHGIVLTADYTAKRYGVKTGMALWQA 82 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLT 117 K + ++ +LY S E + ++E + IDE++ D++ D Sbjct: 83 KQVCP--DIIFLPPRMDLYLRFSRMAQEIYSEYTDKIEPFGIDESWLDVSESAGIKGDGY 140 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +EI + + +TV +G++ K AKL + K T G + + Sbjct: 141 AIAKEISERMKKELGITVSIGVSFNKIFAKLGSDYKKPDAITTMG------KDEYKAKAW 194 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV ++ +GR S+K MGIKT+ DLA D + K + G + Sbjct: 195 PLPVANLLYVGRATSRKFADMGIKTIGDLATMDEGILIKKLGKIGSVLHAFANGYDDSPV 254 Query: 238 --EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 E + + + S + + + ++ + A A +LR CR + ++ Sbjct: 255 KLENTSAPVKSVGNSTTTPKDMKTDEDVKIVLYILAESVAARLRENGFRCRTVEISLR-- 312 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG---------------HRY 340 ++ + S VKL + + +I AA ++ Sbjct: 313 ----DKELFHFSKQVKLKNASNITAEIAEAAYLLYKKNYRLPADEEELKNSIPEFYQKPL 368 Query: 341 QKAGVMLGDFFSQGV-AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 + G+ D + Q+++F + R ++ +DT+ + G ++ Sbjct: 369 RSIGICGTDLVTDYYWEQMDIFMNPRLREKQMKMDITVDTIRKRFGFYSIQRGLMYRD 426 >UniRef50_A9KNH1 DNA-directed DNA polymerase n=4 Tax=Clostridiales RepID=A9KNH1_CLOPH Length = 400 Score = 384 bits (987), Expect = e-105, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 175/410 (42%), Gaps = 28/410 (6%) Query: 1 MFALCDVNAFYASCETVFR----PD---LWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 + DVN+ + S E+V R P+ L P V + G V+A++ +AK+ G+ Sbjct: 7 LIFHVDVNSAFLSWESVHRLAADPESIDLRTIPSAVGGDKQSRHGIVLAKSTQAKSFGIV 66 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P +V N+E+Y S R+M+ L E +P + +SIDEAF D+T Sbjct: 67 TGEPLTHALQKCPS--LVVVPPNFEVYTRYSERLMNLLSEYTPTLNQFSIDEAFLDMTDT 124 Query: 111 RNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + D +IR VL+ TV +GI+ K LAK+A+ K + Sbjct: 125 YHLFGAPMDIANQIRDRVLKELGFTVNIGISTNKLLAKMASDFKKPN------LCHSLFP 178 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE- 228 + M LPV++++ +G+ K +GI+++ DLA T++ ++ H + E Sbjct: 179 SEIPEKMWPLPVEELFFVGKSAKAKFGILGIRSIYDLAHTNVNILKTHLGNKYSALIHEY 238 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G +E P + S + + + D +Q + + + +LRS + C I Sbjct: 239 ANGIDEEPVEVTDPKAKGCGNSITLSQDVIDNAIAKQVLLALSETVGARLRSSNVSCSCI 298 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + IK + F + L T + I AA R D W + G+ Sbjct: 299 TVEIKYTNFQ------TYTHQTVLPHQTNTTATIYEAACRLFDEFWD-NSPIRLLGIRTT 351 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 +Q++LFD+N ++L + +D++ K G ++ A + Sbjct: 352 KLDDTDFSQISLFDNNQSD-KFKKLDSAIDSIRNKYGIDSVKRASFLKKG 400 >UniRef50_B9MMT7 DNA-directed DNA polymerase n=2 Tax=Clostridia RepID=B9MMT7_ANATD Length = 411 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 94/404 (23%), Positives = 162/404 (40%), Gaps = 23/404 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + CD+N FYAS E +++P+L KPV V G V+A+N AK+ G++ GD ++ Sbjct: 4 VILHCDLNNFYASVECLYQPELRNKPVAVCGESELRHGIVLAKNQIAKSYGIQTGDVIWQ 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDL 116 +V N+ LY S V E + +E + IDE + D++ R Sbjct: 64 ALKKCP--NLVILKPNFPLYIRFSKLVQRIYSEYTDLIEPFGIDECWLDVSQSTGILRSG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 EI+ + LTV VG++ K AKL + K V + E ++++ Sbjct: 122 RKIAYEIKERIKSELGLTVSVGVSFNKVFAKLGSDYKKPDA------VTVITKENFKQIV 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP D+ +G KKL + I T+ D+A + ++++ E G Sbjct: 176 WPLPAKDLLYVGSATEKKLSSRAIYTIGDIAKSSPEYLKRILGKWGEVLWIFANGLDTTP 235 Query: 237 LEEF--APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + I S + +T Y I + A++LR ++ C + +I+ Sbjct: 236 VTPPLFEDNIKGIGNSITLPRDLTCYEDAEYVIRMLSESVAQRLRQQYLKCYTVQVWIRD 295 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-SQ 353 S + + KL PT +R+I A W + + GV D + Sbjct: 296 SF------LFSITRQEKLKNPTFLAREISQKAFEIFKKHWNFKNSIRSLGVRALDLVCAN 349 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 QL D+ + EQL +D + + G+ + A + Sbjct: 350 SFYQLEF--DSLKKFKLEQLEKTVDQIRRRFGQSAVLPAILLTK 391 >UniRef50_C9RDA6 DNA-directed DNA polymerase n=1 Tax=Ammonifex degensii KC4 RepID=C9RDA6_AMMDK Length = 385 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 89/397 (22%), Positives = 157/397 (39%), Gaps = 25/397 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 LCD++AF+A+ E P+L GKPV+V + G V + EA++ GV+ P K Sbjct: 4 ILLCDLDAFFAAVEQRDHPELRGKPVIVGGSLTGRGVVATCSYEARSFGVRSAMPLKKAL 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L + + N Y +++ V++ +P +E+ SIDEA+ + + Sbjct: 64 RLCPQA--ILLPVNISRYREVAAEVLAIYRRFTPFIEVVSIDEAYLGVPS----GEGLAV 117 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R I+ V + L + +G++ K LAK+A AK + E +++ L Sbjct: 118 ARAIKEAVRKELDLPLSIGVSVNKLLAKVACDLAKPQGLKAL------WPEEVPQVLWPL 171 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + GIG + ++L A GIKTV DLA + ++ R G L Sbjct: 172 PVGVLPGIGPKTERQLQAKGIKTVGDLAAAPLYLLKMLLGSEALRFKEYSHGVDRRGLVL 231 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P +F + + + +R A+ A +LR R ++ ++ + F Sbjct: 232 SRPPL-SFSKETTFPQDVQEPEVVRGALMRLAEDLGYRLRQNGYLARSVTLKLRFADFR- 289 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + L T I A + ++ G+ + + QL+ Sbjct: 290 -----TVTRTRCLAEGTNRDSLIYRTAWELFQKFASSP-PWRLVGIKVAELS--NWKQLS 341 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 +D L V+D L ++ GR + A Sbjct: 342 WLED-EQEERERMLALVLDALRSRYGRPVVRRASGLK 377 >UniRef50_C0FVJ8 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVJ8_9FIRM Length = 405 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 97/403 (24%), Positives = 164/403 (40%), Gaps = 27/403 (6%) Query: 1 MFALCDVNAFYASCE----TVFRPD---LWGKPVVVLSN---NDGCVIARNAEAKALGVK 50 + DVN+ + S E PD L V+ + G V+A++ AK G+ Sbjct: 11 LIFHVDVNSAFLSWESAKRLRDNPDALDLRTINAVIGGDEKMRHGVVLAKSPSAKKYGIM 70 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + +V ++ELYA S + + LEE++P +E SIDEAFCD+TG Sbjct: 71 TGEPLSHARQKCPE--LVVVPPDHELYAASSRKFIEILEEVAPVIEQCSIDEAFCDMTGT 128 Query: 111 RNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 D F +++ + + TV +GI+ K LAK+A+ K + V L Sbjct: 129 EKLYGDPIAFATKLKDRIYKELGFTVNIGISTNKLLAKMASDFEKPNR-----VHTLFPE 183 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 E K LPV+ ++G G+ +K+L ++GI T+ LA D + + +F + Sbjct: 184 EMATKFW-PLPVESLYGCGKTTAKRLRSLGITTIGALAKADRQMLLSNFKSQGDYLWESA 242 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G + +P + S + +TD + + S ++R + Y + Sbjct: 243 NGISSSAVTAESPANKGYGNSVTLPYDVTDTENAHHILLSLCETVGARIRYDKAYISVVQ 302 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 I + F + + L + T + I AA + D W + GV Sbjct: 303 VQIVDNDF------HHRCKQLSLPSATNVTEKIYEAACNAFDQGWD-HAPIRLLGVSTSK 355 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 + Q NLFD +L + +D + K G + A Sbjct: 356 ATDESYEQYNLFDQ-DKFERLSKLNSAIDKIRDKYGDDAIVRA 397 >UniRef50_C8WAH8 DNA-directed DNA polymerase n=3 Tax=Coriobacteriaceae RepID=C8WAH8_ATOPD Length = 444 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 96/417 (23%), Positives = 171/417 (41%), Gaps = 38/417 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 L D++AF+AS E + P+ GKPV+V + G V + EA+ GV Sbjct: 25 IGLLDLDAFFASVEQLDHPEWRGKPVIVGGSPHKRGVVSTASYEARKYGVHSAMASATAV 84 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L + + Y Y++MS+ VM L++ +P VE SIDEAF D+T G + + + Sbjct: 85 KLCPQA--IWTPGRYNRYSEMSSLVMGFLKDETPLVEQVSIDEAFFDITPGRFSKENPLE 142 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I+ V +T +G+ KT+AK+A+ K + + ++ Sbjct: 143 ICKRIQKKV-AALGITCSIGLGTNKTIAKIASEQEKPRG------LTAVFPGTESHFLAP 195 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++ + GIG ++K L GI+T+ +L+ D ++ + + +G+ ++ Sbjct: 196 LPIEAMSGIGPAMAKTLHQQGIRTLGELSRADSTYLTSFVGNTASKMILRAQGKEVSEVH 255 Query: 239 EFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 E A + + + R+F + D + +AI + +LR + ++ +K S Sbjct: 256 EAAHPRDVKSVSNERTFETDLFDKQEIEEAIRHISGVVGRRLRKKQLQGFTVTLKVKAS- 314 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-- 354 ++ ++ PT D A L IW+ G + GV + F + Sbjct: 315 -----ATESHTVQKRMSIPTDDEHLFAEIAVNLLPTIWKEGQPVRLLGVGISSFTDEDNS 369 Query: 355 -VAQLNLFDDNA---------------PRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 Q +LFD + PR L V D L K G + + Sbjct: 370 KPVQTSLFDQSEDTFNTGASVPTTKKKPRSDLRHLSEVTDKLKDKFGASVVQYGRDL 426 >UniRef50_C4L3M4 DNA-directed DNA polymerase n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L3M4_EXISA Length = 363 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 88/377 (23%), Positives = 151/377 (40%), Gaps = 23/377 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AFYAS E RP+L GKPV+V ++ G V + EA+ GV + Sbjct: 4 LIIHVDMDAFYASVEQRDRPNLRGKPVIVGGPPHSRGVVATCSYEARKYGVHSAMSSRRA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLT 117 L ++ Y +S +VM + ++P VE S+DEA+ D+T Sbjct: 64 FALCPHAT--FVKPRFQAYRQVSAQVMEIFKSVTPLVEPLSLDEAYLDVTENSLLSTSGP 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 R I + +RT LT G+A +K +AK+A+ K + + L+ ++ Sbjct: 122 FIARYILGEIKRRTGLTASAGVAPSKFVAKIASGFEKPNG------LTVVPLDEVATFLA 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQ 236 L ++ + G+G+ ++ L G T+ DL T ++ F ++ G Sbjct: 176 PLSIEAMHGVGKVTAQTLYKSGYHTIGDLQQTRPEQLKGIFGHDRGQQLYELAHGRDTRP 235 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + ++ I +F I D + + + +L C+ ++ IKTS Sbjct: 236 VVAMRE-RKSIGSETTFAFDIDDPEEVFERVIPEMEDVLRQLDRRDLSCQTVTIKIKTSE 294 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QG 354 F S +KL PT D +I A R D + + G+ + D + Sbjct: 295 FQA------RSHQIKLNHPTHDHDEIRRLARRLFDEMNVT-EPVRLIGLTVSDLIPRTES 347 Query: 355 VAQLNLFDDNAPRPGSE 371 QL FD+ E Sbjct: 348 TRQLT-FDELTKPSLEE 363 >UniRef50_A5N2U5 DNA polymerase IV n=5 Tax=Clostridiaceae RepID=DPO4_CLOK5 Length = 400 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 93/409 (22%), Positives = 168/409 (41%), Gaps = 27/409 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + L D+NAF+ SCE+ P++ GKP V N G ++ N EA+ GVK K Sbjct: 4 VIFLVDMNAFFISCESTRHPEIIGKPAAVAGDPKNRSGIILTANYEARKFGVKTTMVLHK 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 L ++ ++ Y S VM L + +P +E SIDEA+ D+TG + Sbjct: 64 VLKLCP--NIIIIPPDHCFYKQKSKEVMGILSKYTPVIEKNSIDEAWLDMTGCERIFGRS 121 Query: 118 -DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 I + L +GI++ K LAK+A+ K G+ L + + K + Sbjct: 122 YQTAECIMKHINSELGLDCSIGISENKFLAKMASQMKKP-----LGITKLWKKDIELK-L 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV+ + GIG++ ++KL M IKT+ +LA+ D R++ K V + G Sbjct: 176 WPLPVEFMNGIGKQTARKLREMKIKTIGELANFDRRYLIKKLGKVGAEIHQFANGIDVSP 235 Query: 237 LEEFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + + I S + I+D S + + + + R ++ + IK S Sbjct: 236 VTPHSHKDVKSIGKSITLAHDISDIESAKVILMELSDKVGMTARKYNKKGHTVQINIKYS 295 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-QG 354 F + + T ++I +A L+ W + G+ L F Sbjct: 296 NFQ------SITRQRTITE-TYLVKEIYSAGIEMLEKNWNERLPVRLLGISLSGFSKYNE 348 Query: 355 VAQLNLF------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 Q+++F ++ + +++ +D++ K G + + Sbjct: 349 DEQISMFNMLEIDNEKSSVRKIDKIEAAIDSIRKKYGDSIIKSGSLIKK 397 >UniRef50_B3T119 Putative impB/mucB/samB family protein n=1 Tax=uncultured marine microorganism HF4000_008B14 RepID=B3T119_9ZZZZ Length = 380 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 82/367 (22%), Positives = 147/367 (40%), Gaps = 18/367 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYA+ E + PDL GK V+V + N G V + EA+ G+ P Sbjct: 20 VLHADLDAFYAAVEVLDDPDLAGKAVMVGGDPENRGVVATASYEARVFGIHSAMPMRTAV 79 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + ++ Y +S VM + + VE S+DEA+ D+T + Sbjct: 80 RLCPHG--IIIHPRFDRYRQLSRAVMDVFHDFTELVEPLSMDEAYLDITEAVDAGRLPLA 137 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E++ V + LT+ VG +K++AK+A+ K + + +R+ ++ Sbjct: 138 IALELKNRVHENIGLTLSVGAGTSKSVAKIASDLHKPDG------LVVVAPGEEREFLAP 191 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L V +WGIG + ++L A GI+T+ DLA + ++ F GE + Sbjct: 192 LAVGKLWGIGPKTGQRLRADGIETIGDLASQSTGWFQRRFGKRALDVQSRAMGEDREPVR 251 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + +F ++ ++ + A R A+ L + + ++ + + F Sbjct: 252 TEREA-KSVSAESTFATDLSGEGTLYPHLSRLAGRVAQHLEGKQLKGKTVTVKARLADFT 310 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + L PT I+ A R G ++ GV + F QL Sbjct: 311 ------TFTRQTTLPYPTGSDTVILETAWRLFSRELTPGRSFRLLGVGVSGFTEDEEFQL 364 Query: 359 NLFDDNA 365 LF + Sbjct: 365 PLFGEEQ 371 >UniRef50_Q8UJK7 DNA polymerase IV 2 n=3 Tax=Bacteria RepID=DPO42_AGRT5 Length = 357 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 81/367 (22%), Positives = 145/367 (39%), Gaps = 23/367 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIAR-NAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P+L G+PV V S V+A + EA+ GV+ P Sbjct: 4 IIHVDMDAFYASVEQRDNPELRGRPVAVGSAAARGVVAAASYEAREFGVRSAMPSVTAAR 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 ++ +++Y +S ++ + E + +E S+DEA+ D+T + T+ Sbjct: 64 RCP--DLIFVPPRFDVYKAVSQQIRAIFAEYTRLIEPLSLDEAYLDVTENLKGMEIATEI 121 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIR + Q T L GI+ K LAK+A+ K + + + + L Sbjct: 122 ASEIRERIKQITGLNASAGISYNKFLAKMASDLNKPNGQA------VITPKNGPAFVEQL 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V G+G ++K+ GI+T DL ++F+ +HF RG Q+ Sbjct: 176 AVKKFHGVGPATAEKMHRFGIETGADLKSKSLQFLAEHFGKSGAYFYGIARGIDERQVRP 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + +F I D + A + ++ + ++ +K S F Sbjct: 236 DR-IRKSVGAEDTFSVDINDLDLATAELRPLAEKVWHHCEAQRVSGKTVTVKVKYSDFT- 293 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF------SQ 353 + S P ++I+ AA+ L ++ + GV L + Sbjct: 294 -----QATRSRTSALPVNGIQEILEAASALLATVYPFRRSVRLLGVTLSSLTNDQEAEDE 348 Query: 354 GVAQLNL 360 QL+L Sbjct: 349 EQPQLDL 355 >UniRef50_Q31HB8 ImpB/mucB/samB family protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HB8_THICR Length = 450 Score = 380 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 193/454 (42%), Positives = 271/454 (59%), Gaps = 38/454 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVI---------------------- 38 +FAL D N+FY SC+ F P L +P VVLSNNDGCV+ Sbjct: 3 VFALVDGNSFYVSCQIAFEPALKNRPAVVLSNNDGCVVAANAKAKAIDAFLRQQKTHFGP 62 Query: 39 ----ARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR 94 A E+ M P+FK K + V FSSNYELYADMS+R+ S L + + Sbjct: 63 GGYKAARPESI-----MFQPYFKVKRYLDQINAVVFSSNYELYADMSSRMHSVLSGFAVQ 117 Query: 95 VEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 EIYSIDE+F DL+G+ + D T +G E++ TV+Q L V VG ++TLAKLANH AK Sbjct: 118 QEIYSIDESFLDLSGM-SLSDFTAYGEEMKRTVMQWLGLPVAVGFGSSRTLAKLANHLAK 176 Query: 155 KWQRQTGGV-VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF 213 K + + + + L+ + + DVWG+G+ +S KL+ GI + DL +D++F Sbjct: 177 KQPDHQDVLDLTVLSEASLNALLKKVAIRDVWGVGKGLSAKLEMQGILSAYDLKVSDLKF 236 Query: 214 IRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 IRK +++ LER VRELRGE CL L A + ++II SRSFG+ +T+Y M QA+ SY R Sbjct: 237 IRKRYSITLERIVRELRGESCLSLGALATSDRQIISSRSFGQPVTEYAEMEQAVASYIVR 296 Query: 274 AAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI 333 AAEK+R++H+ C+F++ I+TSPF +Y NS ++ L+ P+ S +I A R+L +I Sbjct: 297 AAEKMRAQHKVCQFVTVSIRTSPFQNRSCFYQNSQTLPLIYPSDSSVLLIKLAKRALRSI 356 Query: 334 WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP---RPGSEQLMTVMDTLNAKEGRGTLY 390 WQ+G+ YQKAGV+L +G Q++ F N P S++LM VMD LN G+GT+ Sbjct: 357 WQSGYAYQKAGVILSGVTEKGAVQIDCFAPNPQYSANPKSDRLMQVMDFLNHSMGKGTVQ 416 Query: 391 FAGQGI--QQQWQMKRAMLSPRYTTRSSDLLRVK 422 A +G Q WQMKR+ +S RYTTR +LL V+ Sbjct: 417 LAAEGRKNDQAWQMKRSKMSKRYTTRWDELLTVR 450 >UniRef50_B1CA62 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CA62_9FIRM Length = 413 Score = 379 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 91/404 (22%), Positives = 170/404 (42%), Gaps = 28/404 (6%) Query: 1 MFALCDVNAFYASCETVFRP-------DLWGKPVVVLSN---NDGCVIARNAEAKALGVK 50 + DVN+ + S + + DL P V + G V+A++ +AK GV+ Sbjct: 8 IIFHIDVNSAFLSWQAAYNKKMGNKEVDLRSIPSAVGGDEAKRKGVVLAKSQKAKKYGVR 67 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+ F+ + ++ N+++Y SN++ L E S +E YSIDE F D T Sbjct: 68 TGESLFEARKKCP--NLLIVKPNFKIYRMYSNKLFDLLSEYSDTIERYSIDECFLDYTSS 125 Query: 111 RNC-RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + + EI+ + + TV +GI+ K LAK+A K + V+ L Sbjct: 126 QKLFGEPIKAAYEIKERIKRELGFTVNIGISNNKLLAKMAGDLKKPDK-----VITLFPE 180 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRE 228 E + K++ L +++++ +GR+ +KL+++GIKT+ DL + F+ +F Sbjct: 181 EIEEKML-PLTINELFMVGRKTKEKLNSLGIKTIGDLNKCSMGFLISNFKKAQGTMLYNY 239 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G ++ E + + I S + TD +++ + + +LR + I Sbjct: 240 SHGIDESEV-EISRQTKSIGNSTTLKNDTTDINEVKKVFLALSDSVGTRLRRKDLKGNTI 298 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + IK + F + S L T + I A + + W + G+ +G Sbjct: 299 TVTIKNNLF------HSYSHQRTLPYFTNSTNTIYEQAFKLFNEFWN-NDAIRLLGISVG 351 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 V QL+L ++ +++ VMD L G+ + Sbjct: 352 GLNKDEVNQLSLIEEKIENEKMKKIEEVMDKLRDNYGQDIIKRG 395 >UniRef50_B4WH69 ImpB/MucB/SamB family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WH69_9SYNE Length = 371 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 82/363 (22%), Positives = 148/363 (40%), Gaps = 20/363 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P+L GKPV V + G V A + EA+ G+ P Sbjct: 23 IIHIDMDAFYASIEQRDNPELRGKPVAVGGLPSQRGAVCAASYEARKYGIHSAMPSRSAI 82 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 + ++ +E Y +S + + + + VE S+DEA+ D++ + Sbjct: 83 TRCQH--LIFVKPRFEHYRAVSAEIRAIFFDYTELVEPLSLDEAYLDVSVDKQGIGSAVA 140 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++IR + LT G++ K LAK+A+ K + + E + + Sbjct: 141 IAKQIRDRIRTDLQLTASAGVSINKFLAKIASDLNKPDG------LSFISPEEAKTFIEQ 194 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L ++D +G+G + K+ ++GI T DL + + F V R R E + Sbjct: 195 LRIEDFYGVGPATATKMKSLGIHTGADLKTWTQAELTQTFGKVGSYYYRVARAEDNRPVN 254 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ I RSF ++ M A+ + A +++L+ + ++ IK + Sbjct: 255 PNR-IRKSIGAERSFFRDLSQIEDMETALANIATEVSQRLQKNKRQGHTLTLKIKYDNYD 313 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-SQGVAQ 357 + S L TP + + I+ ATR L + + G+ + + Q Q Sbjct: 314 ------TITRSRTLETPI-EEKQILQIATRLLSLHVERDRPVRLLGITVSNLIAPQPYHQ 366 Query: 358 LNL 360 L L Sbjct: 367 LTL 369 >UniRef50_Q2FKS4 DNA-directed DNA polymerase n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKS4_METHJ Length = 368 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 87/365 (23%), Positives = 153/365 (41%), Gaps = 21/365 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D+++FYAS E PDL GKPVV+ G V + EA+A G+ P Sbjct: 17 IILHLDMDSFYASVEIRNNPDLSGKPVVIGADPMQGTGRGVVSTCSYEARAFGIHSAMPI 76 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + L + + YA +S +M L ++ +E SIDEA+ DL+ R+ Sbjct: 77 SQAYHLCPHA--IFIPPHMATYAQVSATIMQILRGIAGEIEQVSIDEAYLDLSCDRSYEL 134 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 I+ + + LT VG+A ++ AK+A+ K + + + + Sbjct: 135 AAHHAANIKQVIRNQVGLTCSVGLAPSRIYAKMASEQQKPDG------LTVVSPDTLESF 188 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + LPV + GIG++ ++ L G++T+ D+A DI+ ++ F R + RG+ Sbjct: 189 LKPLPVGKIPGIGKKSAQVLINAGLQTIGDIARCDIQTLQDMFGSHAVRLHQIARGQDRE 248 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 L E + ++ I +F T + ++ + +L ++ Y R I I+ + Sbjct: 249 GLRE-SGKRRSISREHTFLRDSTSPDEILGSLHTMILSLCHELEEQNIYSRTIGIRIRYT 307 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + SV L+ PT++ R I A +W + GV Sbjct: 308 GF------ITRTKSVTLMQPTREVRVIECAIDGLFTEMWDRS-PVRLIGVRFSGLIHPDP 360 Query: 356 AQLNL 360 Q +L Sbjct: 361 VQRSL 365 >UniRef50_C1A1E2 DNA polymerase IV n=28 Tax=Actinobacteria (class) RepID=C1A1E2_RHOE4 Length = 432 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 99/400 (24%), Positives = 162/400 (40%), Gaps = 24/400 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D+++FYAS E P L G+PV+V G V+A + EAKA GV+ + + L Sbjct: 38 ILHADLDSFYASVEQRDDPTLAGRPVIVGG---GVVLAASYEAKAFGVRTAMSGGQARSL 94 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFG 120 + + Y+ S V + SP VE SIDEAF ++ G+ + G Sbjct: 95 CPQA--IVVPPRMSAYSQASKDVFDVFHDTSPLVEGISIDEAFLEVGGLAKIVGNPLQIG 152 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +R V ++ L + VGIA+TK LAK+A+ AK E + + + LP Sbjct: 153 ANLRRDVAEQVGLPITVGIARTKFLAKVASAFAKPDGLLR------VPPEGETEFLHPLP 206 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEE 239 V+ +WG+G+ + KL I TV D+A D I + Sbjct: 207 VEKLWGVGKITAHKLRNFDIVTVGDIARHDESSIVSILGGGAGRHLYALSHNRDPRPVRA 266 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + + + G + ++ S R + ++RS + R ++ ++ + F Sbjct: 267 YR-GRSSMGAQHALGRGSHSRAELDASLMSLVDRVSRRMRSAQRTGRTVTLRLRFADFT- 324 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVAQ 357 + S L T D+ +++NA+ LD A GV + + G Q Sbjct: 325 -----RATRSHTLRRSTADTAELLNASMVLLDEAVPMIADKGITLIGVAVSNLDRDGAEQ 379 Query: 358 LNL-FDDNA-PRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 L L FD P + L + MD++ K G L Sbjct: 380 LELPFDGPGFAGPDTVALDSAMDSVRKKFGSAALTRGVLL 419 >UniRef50_Q97MB3 DNA polymerase IV n=1 Tax=Clostridium acetobutylicum RepID=DPO4_CLOAB Length = 396 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 91/407 (22%), Positives = 171/407 (42%), Gaps = 25/407 (6%) Query: 1 MFALCDVNAFYAS---CETVFRPD---LWGKPVVVLS---NNDGCVIARNAEAKALGVKM 51 + DVN+ + S E + + + P V+ + G V+A++ AK G+ Sbjct: 4 VIFHVDVNSAFLSWTAVEKLKNGEDIDIRKVPSVIGGDEKSRHGVVLAKSTPAKKYGIVT 63 Query: 52 GDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR 111 G+ + + ++ F ++ Y S +M+ L+ +P +E YSIDE F D+T Sbjct: 64 GESLYHARKKCP--NILVFPPRFDTYRKASESMMNLLKRFTPHIEKYSIDECFMDVTNDL 121 Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + +F I+ + TV VGI+ + LAK+A+ K + T Sbjct: 122 RGMESVEFASIIKERIKNELGFTVNVGISTNRLLAKMASELNKPDKINTL------YKHE 175 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + M LPV +++ +G+ + +KL+ + IKT+ +LA D+ ++ F G Sbjct: 176 IKDKMWPLPVGELFMVGKSMKRKLNELHIKTIGELAKYDVNILKAKFKSHGNMVWEYANG 235 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + + + I + +TD + + + + ++LR ++YC IS Sbjct: 236 IDNSDISRYRDEIKCISNETTLSMDLTDTEKIHKILVTLCENLGQRLRDANKYCTSISVN 295 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 I+TS F S KL +RDII A + + +W + GV L Sbjct: 296 IRTSDFR------NYSHQKKLKNAVSSTRDIILYADKIFNEMW-GREPIRLLGVQLSGLC 348 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 S Q+++FD+ +E L +D++ K G + + ++ Sbjct: 349 SGSSVQISMFDE-KTDTRNEILDKTLDSIRKKYGDNVIMRSVLLEKE 394 >UniRef50_A7REV5 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7REV5_NEMVE Length = 870 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 88/434 (20%), Positives = 155/434 (35%), Gaps = 66/434 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGC---------------------- 36 + D++ F+ S P+L GKPV V + GC Sbjct: 285 VIMHIDMDCFFVSVYVRDHPELDGKPVAVSRFNGGGGCELKSSHIVNYEMSFPTGFVADL 344 Query: 37 ---------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 + + + A+ GV+ G + + L + C ++ Y +S Sbjct: 345 TSPDKSSAFFNSMSEIASCSYAARECGVRNGMFLGQARKLCP--DITCVPYLFDKYRQVS 402 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIA 140 R+ L S +E S DEAF D+T + + ++IRA + T GI+ Sbjct: 403 QRLYEILVSYSHDIEAVSCDEAFLDVTHSLDAGTEPMALAQQIRAEIRAATRCNASAGIS 462 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 LA++ AK + LS + + M++ D+ G+G +SKKL+ MG+ Sbjct: 463 SNVLLARMCTRIAKPDGQ-----FYLSREDDVIQFMASQKAKDLPGVGWALSKKLNDMGV 517 Query: 201 KTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 +T DL ++ ++K F R RG L ++ + ++G R T Sbjct: 518 ETCADLQKLSLQALQKEFGPKTGLSLHRSCRGVDDRPLR-VERERKSVSAEINYGIRFTQ 576 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT--------SPFALNEPYYGNSASVK 311 + I A ++LR R I+ +K F + S S Sbjct: 577 DYEGVKFIEELAGEVHKRLREVGLKGRCITLKLKVRQEGAPMPRKFMGHGICDNVSRSAT 636 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD----DNAPR 367 L+ PT D+ I L + H ++ G+ + + LFD +++ Sbjct: 637 LVEPTDDNSVIARECLNLLKTLNIPAHDFRGLGIQVSKLTNSSAGSKTLFDFMRCEDSTA 696 Query: 368 PGSEQLMTVMDTLN 381 E+ D + Sbjct: 697 EKPEK-----DEIR 705 >UniRef50_C0D1Q6 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0D1Q6_9CLOT Length = 435 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 101/409 (24%), Positives = 170/409 (41%), Gaps = 28/409 (6%) Query: 1 MFALCDVNAFYASCETVFR----P---DLWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 + DVN+ + S E+V+R P DL P V + G V+A++ AK GV Sbjct: 22 LIFHIDVNSAFLSWESVYRLSADPQALDLRTIPSAVGGDAKSRHGIVLAKSTLAKQYGVT 81 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + + + S ++ Y S+R+M LE +P E +SIDE F D+T Sbjct: 82 TGEPLAQALRKCPQ--LTVVPSRFDYYIKCSHRMMELLETYTPDHEKFSIDEIFLDMTQT 139 Query: 111 RNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + + IR + TV +G+A K LAK+A+ K + L Sbjct: 140 IHLFGQPLEAANRIRERIRDELGFTVNIGVAPNKLLAKMASDFEKPDK-----CHTLFAH 194 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR-E 228 E K + LP+ +++ +G +K++ +GI T+ LA D+ ++ H T+R Sbjct: 195 EIPSK-LWPLPIRELFFVGGAAQRKMENLGIHTIGQLASCDLAVLKAHLGEKYAVTIRGY 253 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G + E P + S + ++DY + Q I S +LR++ CR + Sbjct: 254 ANGVDVDPVAEKDPINKCYGNSVTLSRDVSDYETACQVILSLCETVGARLRADRVLCRNV 313 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 +K F + S + L PT + + A R L W + GV G Sbjct: 314 CVELKDWEF------HTQSHQMILPEPTDSTSALYGYACRLLREFWDR-TPVRLIGVRAG 366 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 +QL+LFD + + L +D + +K G ++ A + Sbjct: 367 KIDDDSFSQLSLFDSPS-NRKKKDLEKAVDQIRSKFGVDSIKRASFLKE 414 >UniRef50_A0M5X6 DNA polymerase IV n=19 Tax=Bacteroidetes RepID=A0M5X6_GRAFK Length = 406 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 84/395 (21%), Positives = 157/395 (39%), Gaps = 21/395 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++ F+ S E P+L KPV+V + G V A + E + GV G P + Sbjct: 7 IIHLDLDTFFVSAERREHPELNKKPVIVGGLGDRGVVAACSYETRNFGVHSGMPMKVARQ 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L V+ N +Y S+ V + P E S+DE + DLTG+ + F Sbjct: 67 LCPAATVI--KGNASIYTKFSHEVTEVIRSKVPSFEKASVDEFYADLTGMDRFFGINQFA 124 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +E++ ++L+ T L + G++Q K ++K+A K + ++ + + ++ ++ LP Sbjct: 125 KELQQSILKETRLPISFGLSQNKIVSKIATGEGKPYAQK------IIDPGTEKNFLAPLP 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ + +G + +KL +GI+ + + + + + G + F Sbjct: 179 VNKIPMVGNKTFQKLLNLGIRRIETIQKMPVEVLESVLGKNGRTIWKRAHGIDNPPIIPF 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ I R+F D + + + A A +LR ++ +S I+ S F Sbjct: 239 H-ERKSISTERTFNRDTIDMVRLHATLVAMAESLAYQLRRGNKLTSNVSVRIRYSDFQ-- 295 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 S K+ T +I ++ + GV G Q+NL Sbjct: 296 ----TYSKQAKIS-YTSADHILIPKVEELFKQLYSRRMLIRLIGVRFSGLVG-GHYQINL 349 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 FDD+ L MD + + G ++ A Sbjct: 350 FDDSEEML---SLYNSMDKIKKRFGEHSVMRAVSM 381 >UniRef50_Q0AWD6 DNA-directed DNA polymerase n=7 Tax=Bacteria RepID=Q0AWD6_SYNWW Length = 419 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 90/405 (22%), Positives = 161/405 (39%), Gaps = 21/405 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D+N FYAS E + RP++ K V V + G V+A+N AK G++ G+ ++ Sbjct: 4 VILHSDLNNFYASVECLHRPEIRNKAVAVCGDPAARHGIVLAKNYLAKESGIQTGEVIWQ 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDL 116 + +V NY LY S S + +VE + +DEA+ D+TG + Sbjct: 64 AQQKCPE--LVVVPPNYPLYLKFSRLARSIYASYTDQVEAFGLDEAWLDVTGSIHIFGSG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + EIR + ++ VG++ K AKL + K + + + ++ Sbjct: 122 IEMADEIRERIKLELGVSASVGVSYNKIFAKLGSDMKKPDA------TTIISKDNFKQTA 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP D+ +GR +K GI T+ D+A++D ++ E G Sbjct: 176 WPLPASDLLYVGRATCRKFARWGISTIGDIAESDPLVLKARLGKWGEVLWSFANGYDRSP 235 Query: 237 LEEFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + S + + + + I + + A +LR CR + ++ Sbjct: 236 VVAMGEESIIKSVGNSITTPRDLENNEDVLLIIYALSESVAARLREHGFKCRTVHIHVR- 294 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-SQ 353 ++ + KLL P S DI A + + H + GV D + Sbjct: 295 -----DKNLFTFGVQGKLLRPGNISNDIAEKAMALFRSHYSWAHPIRSIGVRGCDLIAAD 349 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 QL+LF D R E++ +DTL + G ++ A + Sbjct: 350 SHEQLSLFTDEEKRIKQEKIEATLDTLRCRFGHFSVQRAVLLKDR 394 >UniRef50_C7MN57 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=3 Tax=Coriobacteriaceae RepID=C7MN57_CRYCD Length = 454 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 97/421 (23%), Positives = 158/421 (37%), Gaps = 43/421 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 L D++AF+AS E + P GKPV+V N G V + EA+ GV P K Sbjct: 29 IMLLDLDAFFASVEQLDHPAWRGKPVIVGGNPEARGVVSTASYEARTYGVHSAMPSSTAK 88 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L + Y ++S +VMS +E+ SP +E SIDEAF D+T R Sbjct: 89 RLCPNA--FWTPGRFSRYREISRQVMSIMEDESPALEQVSIDEAFLDITPSRAQTEHPAA 146 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I+ V + +T +G+ ++K +AK A+ A K + + + ++ Sbjct: 147 IAQRIQQRVCE-LGITCSIGLGRSKAVAKTASEAHKPRG------LTIVPPGYEETFLAG 199 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP + GIG + L GI T+ +A D + F RG + Sbjct: 200 LPTKAMSGIGPAAQQALRKFGITTLGQVAQADDVILNHVFGKNASLMRDRCRGCDDSPVM 259 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + SF +T + A+ + AA+ ++R +S ++ F+ Sbjct: 260 -HPAGAKSVSNEMSFAVDLTSREDIEAALSTVAAKVGRRMRMNGLVGSTLSLKLRRGDFS 318 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV-AQ 357 ++ SA L P D I LD +W+ G + G L G Q Sbjct: 319 IH------SAQCHLDIPCDDEYVITPILFDLLDRVWRPGDSVRLVGCALTHIEEVGAPLQ 372 Query: 358 LNLFD-----------------DNAPRPGSEQ------LMTVMDTLNAKEGRGTLYFAGQ 394 LFD A R ++ L D++ + G L + + Sbjct: 373 ETLFDVADEAKPDDSSTTEPNTQAAQRARMKREDVRAGLKAATDSVRNRFGETALQYGSE 432 Query: 395 G 395 Sbjct: 433 L 433 >UniRef50_A5FSS1 DNA polymerase IV n=5 Tax=Dehalococcoides RepID=DPO4_DEHSB Length = 390 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 83/397 (20%), Positives = 152/397 (38%), Gaps = 23/397 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+ S E RP+ KPV+V G V A + EA+ G+ G P K Sbjct: 6 VMHVDLDAFFVSVEQAVRPEFKDKPVIVGGKPERRGVVAAASYEARKFGIHSGMPLITAK 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L + + N++LY + S + M L + SP +E +DEA+ ++TG + + Sbjct: 66 HLCPQA--IFIEGNHQLYREYSEKFMLILSDFSPFLEPMGLDEAYLEVTGFESLHGSIAQ 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +IR + + +GIA +K AK+A AK + + ++ Sbjct: 124 MASKIRRRITAELGINASIGIANSKVAAKIATEQAKPNGQCE------VPAGEEASFLAP 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + + GIG++ + L ++GI T+ LA F++ G + Sbjct: 178 LDIAVMPGIGKKTEQHLKSLGIDTLGKLAALPASFLKSCLGTYAPYLSNAAMGIDNRPV- 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E + I +F + + + + + LR + R + I+ + F Sbjct: 237 EMPSEAKSISRETTFETDTRNQTFLEAKLSYLSEKITATLRKRGKQTRVVQIKIRFADFT 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQGVAQ 357 + L P +R+I A ++ I + GV + DF Q Sbjct: 297 ------TLTRQKHLGQPASGNREIFQTALSLMNGILDSDRQAVRLLGVGISDFCGPE-KQ 349 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 L + + + E+L +D + K G ++ Sbjct: 350 LEI---DPAKARLEKLDASLDKIRQKYGFSSVQTGRT 383 >UniRef50_B2I3H3 Nucleotidyltransferase/DNA polymerase n=12 Tax=Acinetobacter RepID=B2I3H3_ACIBC Length = 442 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 148/425 (34%), Positives = 227/425 (53%), Gaps = 6/425 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D+N Y SCE +F P L KPVVVLSNNDGCV++R+ EAK LG+KMG PWF+ + Sbjct: 9 VYALVDINNCYVSCERLFNPKLNDKPVVVLSNNDGCVVSRSEEAKLLGIKMGVPWFQIEK 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCRDLTD 118 + GV +SSNY LYA+MS R + L E +E YSIDE F LT D++D Sbjct: 69 DALQAGVQVYSSNYTLYAEMSRRFFAVLGEFFSPDDLEAYSIDECFIHLTPYLQSIDISD 128 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE--RQRKLM 176 + ++R+T+L+ L +GI +KT AKLANH AKK + GV + L+ LM Sbjct: 129 YCNKVRSTLLKWLGLPCCIGIGYSKTQAKLANHYAKKI-KSFKGVCNFITLDPLIMEDLM 187 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 V +VWGIG ++ K+L + + T LDL + + K F+VV+ RT+REL+G+ C+Q Sbjct: 188 QQTSVKEVWGIGYQLVKQLQSYEVYTCLDLTFANEHHMAKAFSVVMARTIRELKGQSCIQ 247 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 L++ A + I+ SRSF + ++ ++QA+ + RA +L + Q C + + Sbjct: 248 LDDPAIPTKRILASRSFAQALSSIEIIKQALIFHLNRAHRRLMKQEQLCACVQVML-YEK 306 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 S ++ L T D + AA + +D +++ Y K GV+ ++ Sbjct: 307 TDKPPYKKATSQAIGLHYATDDLCILTKAAMQQIDVLYKENKSYIKIGVLFCALHARQQH 366 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSS 416 +L+ +QLM + T+ + G L WQMK+ S Y TR + Sbjct: 367 IDDLWQPLELIHQRQQLMETLGTVRKRFGSHYLQVGYHSRNPSWQMKQCHRSKNYLTRWN 426 Query: 417 DLLRV 421 ++L + Sbjct: 427 EMLTI 431 >UniRef50_Q73P36 DNA polymerase IV n=2 Tax=Treponema RepID=DPO4_TREDE Length = 395 Score = 377 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 88/401 (21%), Positives = 166/401 (41%), Gaps = 21/401 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 +F D++AF+AS E + P+ GKPV+V + G V + EA+ GV P + + Sbjct: 6 VFFHVDIDAFFASVEQLDNPEYMGKPVIVGGQSERGVVSTCSYEARKFGVHSAMPILQAR 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + + Y + S VMS ++ +P ++ S+DEAF ++TG+ + Sbjct: 66 KLCPSG--IFLRGRMDRYHEKSKEVMSIFKDFTPEIKQISVDEAFLNMTGMEKIFGTPKN 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++ T+ + T LTV VG AQ K +AK+A+ +K + + + M + Sbjct: 124 SALLLKKTIKEETGLTVSVGCAQNKYIAKIASGRSKPDG------LFIVKAGEEIDFMKS 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQL 237 LP+ DVWG+G + ++L A G+ +V + ++ ++ + +RGE + Sbjct: 178 LPLKDVWGVGGKTRERLIAAGLTSVPQIFNSSEHLLQSILGNASGSFLFQAVRGELY-DV 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 I R+F + + + + A+ ++ E + +S I+ + F Sbjct: 237 FSDDVKSHSISTERTFEHDLFSHAEIDDVMFYLASELMYRIFDEKVKGKTVSVKIRYNDF 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ-GVA 356 + D++D+ A + + G+ + + S A Sbjct: 297 TTVSVQSTGAV-------VNDTQDLFERARELFYKKFDNKTPIRLLGLCIMNIESDIPEA 349 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 Q LF + ++ M TL KEG+ L A + Sbjct: 350 QTELF-YSEKNVKKRKIEETMYTLTKKEGKNILKPARLLKK 389 >UniRef50_Q4L7K8 DNA polymerase IV n=65 Tax=Staphylococcaceae RepID=DPO4_STAHJ Length = 358 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 77/368 (20%), Positives = 140/368 (38%), Gaps = 18/368 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+A E P L GKPV+V + G V + EA+ GV P + Sbjct: 6 IIHIDMDYFFAQVEMRDNPTLKGKPVIVGGKASTRGVVSTASYEARKYGVHSAMPMSQAH 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L + ++ Y + S +MS + + VE S+DEA+ D+T + + Sbjct: 66 KLCP--NGYYVRARFDAYREASAVIMSIFKSYTDIVEPMSLDEAYLDITHLVRPDLSASK 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 IR + ++T LT G++ K LAKLA+ K + + + ++ Sbjct: 124 IATFIRRDIFEQTGLTSSAGVSYNKFLAKLASGMNKPNGMK------VIDYNNVNDILMN 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + D G+G+ K + I T DL D + + F + RG +++ Sbjct: 178 LDIGDFPGVGKASKKVMHNHDIYTGKDLYDKTEFELIRWFGKRGRGLYLKARGIDHSEVK 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F + D + Q I + + AE+L + ++ +KT + Sbjct: 238 ATR-VRKSVGTERTFSTDVNDDEEILQKIWELSGKTAERLSKLQKSGSTVTVKLKTYQYE 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 S L DI N A + + + GV +G+ + Sbjct: 297 ------TFSKQRSLREAVSRDIDIYNVAYDLYNDLKDPDVPIRLIGVTVGNLEQSRYENM 350 Query: 359 NLFDDNAP 366 ++D Sbjct: 351 TIYDFIER 358 >UniRef50_UPI000050FCD1 DNA-directed DNA polymerase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FCD1 Length = 419 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 85/404 (21%), Positives = 170/404 (42%), Gaps = 23/404 (5%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D+++F+ S E + RP+L G+PV+V + G V++ + EA+ GV P + +L Sbjct: 26 LHLDMDSFFVSVELLSRPELVGRPVIVGGRSGRGVVVSASYEAREFGVHAAMPMGRAMNL 85 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTDFG 120 V+ ++ LY+ S +V + +++P + S+DEA+ D++ R Sbjct: 86 CPFAEVI--PPSHGLYSSYSQKVFDLVAQVTPDFQQVSVDEAYIDVSAAVRRLGSPVRIT 143 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++RA + +T L+ VGIA ++ +AKLA+ AK + L L R+ + +P Sbjct: 144 SQLRAEIEAQTGLSASVGIAGSRVVAKLASTRAKPHGQ------LLVPLSATREFLDPMP 197 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++ + G+G + + GI+ + DLA D + + F R G ++ Sbjct: 198 IEALPGVGEKTKEGFFRYGIRLIGDLAAVDEAWAGRVFGAHGHHLWRSAHGLDSHGMDRQ 257 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I +F E + D + + A + A ++R++ + + + + F Sbjct: 258 VKDR-SISAEHTFNEDVWDLSQLEHELLRLADKVAHRVRADGKVATTLGLKYRLADFT-- 314 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG-HRYQKAGVMLGDFFS--QGVAQ 357 S S+ L PT +R+I A ++ + + + GV Q Sbjct: 315 ----TLSRSITLDAPTDLAREIYEALRPAMRNLREQKSKGVRLLGVRAAGLMDFSASGRQ 370 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 + L D+ ++ +D + K G + A ++ Sbjct: 371 VRL-DEAEDSGREAEV--ALDDVRKKFGTAAISQASLLRKRPEH 411 >UniRef50_B0TAW2 DNA polymerase iv n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TAW2_HELMI Length = 409 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 87/409 (21%), Positives = 150/409 (36%), Gaps = 19/409 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 L D+N+FYAS E P L G+PV+V + G ++A + EAK GVK + Sbjct: 7 VLLADMNSFYASVEMAHNPTLRGQPVLVCGDPERRHGIILAASREAKRRGVKTAMTVGEA 66 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLT 117 + + VC LY ++S ++ LSP VE YS+DE F D+ G + D Sbjct: 67 RAICPDA--VCVRPRMSLYLEVSWQIQQIARTLSPLVEPYSVDELFIDVRGAEHIWGDAV 124 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + R V + + VG+ K L+K+A K + GV ++ + Sbjct: 125 EAAGIFRQRVWEAVKVPCSVGVGPNKFLSKMACDVEAK--KSPSGVALW-RVDDVEAKLH 181 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LP+ ++ +G R+ + MG+ T+ DLA + ++ + F + G + Sbjct: 182 PLPIGKMFMVGSRMERHFRNMGLLTIGDLAHYPVDYLMRRFGLRGAVYHNLAWGRDGSPV 241 Query: 238 EEFA-PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + S + + + + R + R +S ++ Sbjct: 242 RPDSLEQTKSVGHSVTLPRDYHHSDDIELVLLELTDEVCRRARKLGKAGRTVSVGLRAYD 301 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 G L +P+ S + A W G + V L G Sbjct: 302 LT-----RGFYRQTTLPSPSNLSGPVFEKAQLLFRRHWD-GRPVRTVTVDLSGLEEDGTL 355 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 Q LF D +++ MD + G + A + RA Sbjct: 356 QQELFRDMD---RQDRVSRTMDRIRDAMGTTAIVRASSLLPAGQARDRA 401 >UniRef50_C6XT23 DNA-directed DNA polymerase n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XT23_PEDHD Length = 385 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 79/395 (20%), Positives = 152/395 (38%), Gaps = 21/395 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D+++F+ S E L GKPV+V ++ G V + + EA+ GV P + Sbjct: 7 IIHMDLDSFFVSVEIKKNSKLAGKPVIVGGLSDRGVVTSCSYEARKYGVHSAMPSRLARQ 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L N + Y++ S V L++ P +E SIDE + D+TG+ F Sbjct: 67 LCPHAE--FVRGNMDDYSEHSRMVTEILQQKVPVLEKASIDEHYIDMTGMERFYGCMKFA 124 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 RE++ V + + L V G++ KT++K+A + K +++ ++ L Sbjct: 125 RELKEQVFKESGLPVSFGLSVNKTVSKIATNECKPNGALQVEQLEI------PSFLNPLS 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + + G+G KL MG++ + A + + K ++ G + + Sbjct: 179 IKKIPGLGAATFLKLSEMGVRKIHTFAQIPQQQVYKVLGNNGLSLWQKAHGIDHTPVIPY 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I ++F D+ +RQ I A +LR + + ++ I+ S F Sbjct: 239 REQ-KSISKQQTFESDSIDFTQIRQLITGMVIELAYELRKQQKLTACVTIVIRYSNFE-- 295 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + ++ T +I A + + + G+ L + G Q++L Sbjct: 296 ----TITQQCRIP-YTALDDTLIVKAKELFERAYTRRMLIRLVGIKLSALVN-GYEQIDL 349 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 + L MD + + G + A Sbjct: 350 ---YSASEEKYNLYQAMDKIRNRYGEKAIALASTL 381 >UniRef50_A3CSG3 DNA polymerase IV n=4 Tax=Methanomicrobia RepID=DPO4_METMJ Length = 360 Score = 376 bits (967), Expect = e-103, Method: Composition-based stats. Identities = 91/365 (24%), Positives = 151/365 (41%), Gaps = 21/365 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D+++F+AS E P L G+PV+V G V + EA+ GV G P Sbjct: 7 IVLHVDMDSFFASIEVRRDPSLAGRPVIVGADPKGGAGRGVVSTCSYEARRYGVHSGMPI 66 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + DL V + YA +S +M+ L + R+E SIDEA+ D++ + Sbjct: 67 SRAFDLCPHG--VYLPVDRPFYASVSVEIMALLSRHAGRIEQVSIDEAYLDVSDAGSFPA 124 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 I+ V + T LT VG+A K +AK+A+ K + + + Sbjct: 125 AGALAAAIKREVREETGLTCSVGVAPGKAVAKIASDFQKPDG------LTIVRPDEVAGF 178 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 +++LPV + GIG++ + L GI TV DLA D++ + R RG Sbjct: 179 LASLPVGRIPGIGKKTGEDLRQAGILTVGDLARRDVQEVIARLGRSGVRVHHLARGIDDG 238 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 +++ + I +F D P + + A AE LR+++ CR ++ ++ Sbjct: 239 EVQ-GREGCKSISRETTFEADTADPPVLAGTLAELADDVAETLRADNLRCRTVTVKVRYR 297 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F ++ S L T D I AA+ L + G + GV L Sbjct: 298 GFQ------THTRSRTLPRFTSDPETIRRAASGLLLP-FLNGEPVRLIGVRLSMLEGGCT 350 Query: 356 AQLNL 360 Q ++ Sbjct: 351 RQASI 355 >UniRef50_C2BWE4 DNA-directed DNA polymerase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWE4_9ACTO Length = 456 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 159/427 (37%), Positives = 229/427 (53%), Gaps = 14/427 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 FAL DV++ +ASCE +F P+L+G+PVVVLSNNDGCV+AR+ EAKALG+KMG PWF+ + Sbjct: 38 FALVDVDSCFASCERIFHPELFGRPVVVLSNNDGCVVARSREAKALGIKMGMPWFQIRAR 97 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 CGVV SSNYELY +S R+M L + S VE+YSIDEAF T + R Sbjct: 98 AEACGVVARSSNYELYGSISARIMEILRQFSASVEVYSIDEAFL--TLYGRPTEFVGIAR 155 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMSAL 179 +R+ +L + V VGIA T+TLAKLA+H AK GGV + +++ Sbjct: 156 SLRSRILHDLGVPVSVGIAPTRTLAKLASHGAK-HTPALGGVASWDAYTPAQHDRILRGT 214 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + D+WGIGRR+ +L+A+GI L L + IR+ FNV L++TV EL G PC+++ E Sbjct: 215 EIADLWGIGRRLKNRLEALGITDALQLQRANPGEIRRRFNVNLQQTVLELNGVPCIEIIE 274 Query: 240 FAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + +++ SRSF + Q + Y+ +LR + + F T+ + Sbjct: 275 RDAVRTHQVMYSRSFSTPVRGVTQAYQVLSIYSQNVTHRLRRQQMTAGALWAFASTAWYK 334 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-FSQGVAQ 357 EP+ SA L T D ++ AA + L Y +AG+ L D Sbjct: 335 --EPFSRISAMAPLHPRTDDPVTVLKAAAKVLLGQVDPRADYVRAGICLTDLGKPDPQEP 392 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRAMLSPRYTTRS 415 L +F + ++ +D +NA G G++ G++ W MKR MLS R TT Sbjct: 393 LPIFAPDPESRRRGKI---IDRVNAAVGEGSVGLGLAGLKAAPDWTMKREMLSNRGTTHW 449 Query: 416 SDLLRVK 422 S+L V+ Sbjct: 450 SELALVR 456 >UniRef50_D1VVF6 DNA polymerase IV n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVF6_9FIRM Length = 412 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 88/400 (22%), Positives = 169/400 (42%), Gaps = 23/400 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D+N+FY SCE + +P+L +PV V + G ++A+ AK GV G+P ++ Sbjct: 3 ILHVDMNSFYVSCELIDKPNLKSQPVAVGGDEKLRHGIILAKTPMAKKFGVLTGEPIWQA 62 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLT 117 K ++ F NYE Y +S + +VE Y +DE F D+TG + Sbjct: 63 KKKCP--NLLIFPPNYEKYIRISKAAQKIYYSYTNQVEPYGMDECFLDITGSKKLFGSPE 120 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 EI+ + +TV VG++ K AKLA+ K E +K++ Sbjct: 121 KIAFEIKERIKTELKVTVSVGLSFNKVFAKLASDMRKPD------YCTFIYKENYKKIVW 174 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V D+ IG + +KKL+ + IKT+ DLA+ D +RK+ + + G ++ Sbjct: 175 PLKVQDMIMIGPQTTKKLNKINIKTLGDLAEADPEILRKNLGINGIKIYNWANGMDNTRV 234 Query: 238 EEFAP--TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 +++ + I S + E + +Y +R I +++L + R ++ + + Sbjct: 235 KDYYQIIPIKSIGRSITCKEDLLNYEEVRAVIQKLCEDISKRLIENNYLARGVNVGYRKN 294 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI--WQAGHRYQKAGVMLGDFF-S 352 + S+ V L P+ + +I A ++ + + + + Sbjct: 295 NLS------HESSDVLLDYPSNSTLEISAKAMDVFLKNFTFKDDEKIRALYIRAIKLIQN 348 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 + Q++LF+D L + + + G+ ++ + Sbjct: 349 REAIQIDLFNDVKKHFKYLSLEKAIYNIRNRYGKNSITYG 388 >UniRef50_D1PGW5 DNA-directed DNA polymerase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGW5_9BACT Length = 387 Score = 375 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 79/361 (21%), Positives = 150/361 (41%), Gaps = 18/361 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+A+ E P+L GKPV V G V + EA+ GV + K Sbjct: 21 IIHIDMDAFFAAVEQRDNPELRGKPVAVGFDGPRGVVSTASYEARKYGVHSAQSIAQAKQ 80 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 ++ ++ YA +S+++ +E + +E SIDEAF D+T + D Sbjct: 81 RCP--NLIIVPCRHDYYAKISHQIHQIFQEYTDLIEPISIDEAFLDVTQNKKGIELAVDI 138 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +EI+ + + T LT GI+ K LAK+A+ K G+ + ++ ++ L Sbjct: 139 AKEIKTRIKEATGLTASAGISYCKFLAKVASDYRKPD-----GICTIH-PDKAYDFIAQL 192 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P++D WG+G++ +K+ MGI DL + + F RG + Sbjct: 193 PIEDFWGVGKKTLQKMHFMGIFNGADLRKVSEEHLVEVFGKAGHIFYDFARGIDERPVIT 252 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + ++ + C ++F E I ++ + E++ R ++ +K + F Sbjct: 253 YR-ERKSVGCEQTFLEDIYLKTAVIIELYHTVLELLERIAKSGFEGRTLTLKVKFADFTQ 311 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI-WQAGHRYQKAGVMLGDFFSQGVAQL 358 +K DI+ A R L + + + H + G+ + + S+ + Sbjct: 312 ITRSISQEKVLK------KKDDILPLAKRLLKQVDYSSAHPIRLLGLSVSNASSEEARKQ 365 Query: 359 N 359 + Sbjct: 366 D 366 >UniRef50_A6NU31 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A6NU31_9BACE Length = 414 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 108/417 (25%), Positives = 170/417 (40%), Gaps = 27/417 (6%) Query: 2 FALCDVNAFYASCETVFRPDLW--GKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWF 56 CD+N+FYAS E + P+L GKPV V + G ++A+N AKA+GVK + + Sbjct: 5 ILHCDLNSFYASVELLSLPELRESGKPVAVCGDPESRHGIILAKNEPAKAMGVKTAETIW 64 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--R 114 + + +V ++ + Y S V + + + VE +SIDE++ D+TG + Sbjct: 65 QARQKCP--DLVLLPAHRDQYRKYSRIVNAIYDRFTDLVEPFSIDESWLDITGSMHLWGG 122 Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 D IR TV T LTV VG++ K AK+ + K + E R+ Sbjct: 123 DGKAIADRIRETVKAETGLTVSVGVSFNKVFAKMGSDYKKPDA------TTVITRENFRQ 176 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 L+ LPV D+ +G +K L G++T+ DLA D + + G Sbjct: 177 LLWPLPVTDLLFVGGAAAKVLRGYGVQTIGDLARFDPQALVTILGKQGAALHSYAAGTEH 236 Query: 235 LQLEEFA--PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + P + + +F + +R + + + A +LR C + I Sbjct: 237 EPVIPARDLPPPKSVGSGLTFRRNLLGLEDVRAGLSALSDEVAARLRRHGLKCTTVQVTI 296 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + F +L PT SRDI +AA L A W + V + Sbjct: 297 RDPNFR------DICRQKRLPAPTYVSRDIADAALELLLASWNLKLPIRALTVTGQNLVD 350 Query: 353 --QGVAQLNLFDDNAP--RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 QL+LF NA R E+L MD + K G + FA +Q +R Sbjct: 351 EADAGEQLDLFAANAAPHRDKLERLERTMDKIRDKYGGTAITFASAVRGEQGGTQRQ 407 >UniRef50_Q1QAG3 DNA-directed DNA polymerase n=2 Tax=Psychrobacter RepID=Q1QAG3_PSYCK Length = 371 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 89/366 (24%), Positives = 146/366 (39%), Gaps = 21/366 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P+L GKP+VV N G V A + E + GV+ ++ + Sbjct: 22 IIHIDMDAFYASVEQRDFPELRGKPLVVGGDPNGRGVVAAASYEVRKFGVRSAMSCYEAR 81 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTD 118 V+ +++Y +S + + L+P VE S+DEA+ D+TG+ + T Sbjct: 82 KRCPE--VIFVPPRFDVYRAVSVEIRRIMHILTPHVEPLSLDEAYLDVTGLSVHQGSATL 139 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +RA +L +T L G++ K LAK+A+ K + +SA Sbjct: 140 MANWLRAQILGQTGLNASAGVSFNKMLAKIASDINKPNG------TAVITPADADAFISA 193 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++ GIG+ +K+L AMG+ DL T + F + G ++ Sbjct: 194 LPIERFHGIGKATAKRLHAMGVSNGADLRRTPAAILVNEFGKRGQFYHDIAHGRDERAVK 253 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + +F E +TD ++ I A A +L + I+ +K S F Sbjct: 254 SERT-HKSVGSETTFRENLTDDNELKIQIYEQNADAFSQLHKKQLIAYTITLKVKYSDFT 312 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-- 356 + S L T + + I + GV S Sbjct: 313 ------QVTRSHTLSTAFDSAESAHFWLDKLFLDI-PRTLPIRLVGVTFSSLTSATQVTP 365 Query: 357 QLNLFD 362 QLNLF+ Sbjct: 366 QLNLFE 371 >UniRef50_A3M2E2 DNA-directed DNA polymerase n=8 Tax=Acinetobacter RepID=A3M2E2_ACIBT Length = 436 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 150/424 (35%), Positives = 226/424 (53%), Gaps = 4/424 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F L DVN Y S ET F P L G+ V+VLS+NDG V+AR+ AK LG+KMG+P F+ DL Sbjct: 13 FFLVDVNNMYTSVETAFDPSLTGRSVIVLSSNDGNVVARSPAAKKLGIKMGEPLFQILDL 72 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCRDLTDF 119 R V+ SSNY +Y +MS R L E EIYS+DEAF +LT R +L Sbjct: 73 VMRNDVIVLSSNYIIYGEMSRRFHKILAEYVSPENHEIYSVDEAFLELTSYRGIYNLNQC 132 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++I+ +L+ L V VGI ++KT AK+ N+ AK + G E + + Sbjct: 133 AQDIKEKLLKLLSLPVCVGIGRSKTEAKIMNYIAKTYPHLNGICNVFDLAEVKDSIFRNT 192 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V +VWG+G + KKL M I TV DL I+ F+VVL+RTV EL G C+ +E Sbjct: 193 DVGEVWGVGSQQKKKLRLMNINTVYDLMTASPSHIQSVFSVVLKRTVLELNGISCIDIEH 252 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 PTK++I+ SR+FG+RITD +++A+ A + R+E I F ++PF Sbjct: 253 TPPTKKQIVSSRTFGQRITDIHDLKEAVIKRTQEAFTRARNEQVLVGCIIVFAYSNPFDK 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 +P+Y S PT D R ++ ATR +D ++++G ++KAGV+L + + Sbjct: 313 TKPFYKKEQSSSFAVPTDDLRLLVQTATRLMDQVYKSGIEFKKAGVILTCLEPKHTYTYD 372 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ-WQMKRAMLSPRYTTRSSDL 418 L D+ +EQLM ++ + G+ + F G + + W + + Y + Sbjct: 373 LLTDHQDLEKTEQLMKAIEEVQQIFGKNKIGFGGSMFKNRIWNLTANYQTRNYF-SFDGM 431 Query: 419 LRVK 422 +++K Sbjct: 432 IKIK 435 >UniRef50_Q2IM85 DNA-directed DNA polymerase n=7 Tax=Myxococcales RepID=Q2IM85_ANADE Length = 418 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 162/410 (39%), Gaps = 25/410 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E + P+L G+PV+V N G V A + EA+ GV+ P + + Sbjct: 13 ILHLDLDAFYASVEQLDHPELRGRPVIVGGTGNRGVVCAASYEARRFGVRSALPTARARR 72 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDF 119 L V + Y+++S RV +P VE S+DEAF D+T R D Sbjct: 73 LCPDG--VFLPPRFGRYSELSRRVFDVYRRYTPLVEPLSLDEAFLDVTASRALHGGGPDI 130 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R I+A V L V G+A K AK+A K + + ++ L Sbjct: 131 ARAIKAAVRGECGLAVSAGVADVKMAAKIATDLGKPDG------LVVVPPGGVAAFLAPL 184 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE-LRGEPCLQLE 238 PV +WG+G L +G+ T+ DLA + R +R GE ++ Sbjct: 185 PVGRLWGVGEVTEAALRRIGVATIGDLARMPESALAAALGPTHARGLRALACGEDPREVV 244 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + +F + + P++ + + + A A +LR+ ++ +K + F Sbjct: 245 P-DEEAKSVGAEDTFDQDLLGRPALERELLAQAGTVARRLRAAGLAGHVVTLKVKYADFT 303 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-SQGVAQ 357 L + V L T D R I +AA L + + G+ + F + Q Sbjct: 304 L------VTRRVTLERATDDDRAIFDAACAQLARV-DLRRPVRLTGISVSGFAGDEERGQ 356 Query: 358 LNLF-----DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 L LF + L +D L + G G + A + + Sbjct: 357 LGLFGGAPAPPPPEASRRKALNAALDALAGRFGEGAVTRADLAGRPPRRR 406 >UniRef50_C0LIJ7 Putative DNA polymerase V subunit UmuC n=1 Tax=Acinetobacter sp. NFM2 RepID=C0LIJ7_9GAMM Length = 429 Score = 374 bits (961), Expect = e-102, Method: Composition-based stats. Identities = 148/416 (35%), Positives = 229/416 (55%), Gaps = 6/416 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +F D+N+ Y S E + P L GKP VVLS+NDG +IAR+AEAK L + MG P FK +D Sbjct: 5 VFIHVDINSAYCSMEAFWNPKLKGKPCVVLSSNDGTIIARSAEAKLLKIPMGAPLFKVQD 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLTGVRNCRDLTD 118 + + V SSN+ LY +MS R L IYSIDE F + T D T+ Sbjct: 65 IINKHNVHVLSSNFALYGEMSRRFHGILSGFVDPSCYSIYSIDEGFIEFTQFTKNFDATE 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE--RQRKLM 176 REIR V + LT VG+ +T T +K+AN+ AKK + G+ +L + Sbjct: 125 MAREIRHQVYKFIGLTTCVGVGRTLTESKMANNLAKKN-PELNGICNLVTMSLVDVESYY 183 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 ++PVD++WG+GR+ +KKL+ MGI +VLDLA ++ +R+ FNV ++ T+ EL G+PC + Sbjct: 184 QSMPVDEIWGVGRKYAKKLNDMGILSVLDLATSNPNRMRELFNVNMQSTILELLGQPCFE 243 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 E KQ+I+ S+SFG++IT+ +++AI Y A +L +EHQ C + F++++P Sbjct: 244 FESSPKAKQQIVSSKSFGQKITELSILQEAISKYTHNAFNRLVAEHQLCGSLIVFLQSNP 303 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F ++PYY S + PT + ++ AAT +D +++ G ++K GVML + + Sbjct: 304 FDQSKPYYSKSLTYTFTQPTNNLMQLVKAATSLIDKLYKEGIEFKKCGVMLCELIKEEHR 363 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG-QGIQQQWQMKRAMLSPRY 411 + L D + LMT + +K G+ + + W+ K S Y Sbjct: 364 TIGLLTDVEQLEKEQALMTAFQNIQSKFGKAKIAAGSCNLKNRDWEPKSERQSRNY 419 >UniRef50_C8P3H3 DNA polymerase IV (Pol IV) n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3H3_ERYRH Length = 406 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 87/407 (21%), Positives = 163/407 (40%), Gaps = 24/407 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 CD++ +A E + P L P+ V + G V+ARN AKA GVK + + Sbjct: 6 ILHCDIDYCFAQIEIMKNPSLADVPMCVGGDESKRHGIVLARNPIAKAKGVKTAETLNEA 65 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 + G+V +++ Y +SN+V E + +VE + IDEA+ D++ Sbjct: 66 RRKCP--GLVIVPPSFDDYLTISNQVKDIYREYTDKVESFGIDEAWVDISDSLLLFGKPG 123 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D EIR + LTV +G++ K AKL + K + + + ++ Sbjct: 124 DIATEIRKRIKTEIGLTVSIGMSFNKIFAKLGSDLNKPDG------LTILMESHVKSMIW 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV D+ +G K L+ MGI+T+ DLA D + H + G+ ++ Sbjct: 178 PLPVQDLLYVGPSTQKSLNKMGIRTIGDLACADENQLHTHIGKMGSLLKSFANGDDTSEV 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + + + + +R+ + A + + R+ + + I+ + Sbjct: 238 NPHTDPAKSVGNGMTTPQDLVSIEEVRRVLFVLAESVSSRCRNIEKKGSVLRICIRNN-- 295 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV-A 356 S KL PT I+N + ++ W + + L D S Sbjct: 296 ----QLETLSRQKKLNQPTNTVDQIVNESLFLIERYWDQKQPLRSITITLSDLVSTTQPI 351 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 QL+LFD++ + +D++ + G + A +Q+ + + Sbjct: 352 QLSLFDESV-----SAIDETIDSIRDRFGHHAIKRANVLLQKNLEKR 393 >UniRef50_D0LIK9 DNA-directed DNA polymerase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIK9_HALO1 Length = 409 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 103/401 (25%), Positives = 152/401 (37%), Gaps = 26/401 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E P L GKPV+V + G V A + EA+ GV P Sbjct: 8 VLHVDLDAFFASVEQRDDPSLRGKPVLVGGSAERGVVAAASYEARRYGVHSAMPMAVALR 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDF 119 + V + YA+ S + L+ SP VE S+DEAF DLTG D Sbjct: 68 RCPQA--VVVRHSMGRYAEASRAFFAILDHFSPLVEPLSLDEAFLDLTGSERLLGDARTV 125 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + I+ V L V VG+A TK LAK+A+ K + + +R + L Sbjct: 126 AQTIKDRVRAELSLVVSVGVASTKFLAKIASDIDKPDG------LCVVEPDRVESFLHPL 179 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 PV +WG+G KL MG++T+ D+A + + G + Sbjct: 180 PVSRLWGVGAVTQDKLHQMGLRTIGDVARYPSSVLSARLGKSMGAHLSALASGYDPRPV- 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E I +F + + + A R A +LR R + IK + F Sbjct: 239 ERPGKPVSIGHEETFEVDLGRKSDIAAVLLGQADRVAARLRRADLRARVVQLKIKYADFR 298 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-----AGHRYQKAGVMLGDFFS- 352 L + L T D I A L + + + GV L Sbjct: 299 L------LTRRRSLADATVDGGVIGAVAVAMLGELEVAENRGKAYAVRLCGVSLSGLEDR 352 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 +G QL L + EQL +D ++A+ G G + A Sbjct: 353 EGPRQLTL--GEPRQQQGEQLGDALDRIHARFGEGVVKRAV 391 >UniRef50_Q2P7M9 DNA polymerase IV n=22 Tax=Proteobacteria RepID=DPO4_XANOM Length = 359 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 92/372 (24%), Positives = 146/372 (39%), Gaps = 21/372 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P L GKPVVV V A + EA+ G++ P + + Sbjct: 4 IVHVDMDAFYASVEQRDDPGLRGKPVVVAWRGARSVVCAASYEARTFGIRSAMPAVRAER 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L + ++ Y +S +V + VE S+DEA+ D+T + T+ Sbjct: 64 LCPNA--IFVPPDFVRYKAVSRQVREIFHRHTDLVEPLSLDEAYLDVTQAKTGMQLATEI 121 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + IR + + T LT GIA K LAK+A+ K + + R + L Sbjct: 122 AQLIRTQIREETELTASAGIAPNKFLAKIASDWRKPDGQF------VIAPSRIDAFLLPL 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V+ + G+G+ + KL A+GI TV DL + ++ HF + R RG +E Sbjct: 176 KVNRIPGVGKVMDGKLAALGIVTVADLRLRPLEELQAHFGSFGQSLYRRARGIDERPVEP 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 Q + +F E + ++ I A + R + R + +KTS F + Sbjct: 236 -DQDVQSVSSEDTFSEDLA-LDALDTHILRLAEKTWLATRRTERIGRTVVLKLKTSNFRI 293 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDF--FSQGVA 356 + S P + A + RY+ GV L F +G Sbjct: 294 ------LTRSCTPEQPPVSQEALAQIALALTRRVELPAQTRYRLVGVGLSGFSNVEEGAV 347 Query: 357 QLNLFDDNAPRP 368 Q LF + Sbjct: 348 QGQLFGEIPQAE 359 >UniRef50_Q2S2C0 Putative DNA polymerase IV n=2 Tax=Bacteria RepID=Q2S2C0_SALRD Length = 373 Score = 372 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 82/364 (22%), Positives = 148/364 (40%), Gaps = 20/364 (5%) Query: 2 FALCDVNAFYASCETVFRPD-LWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYA E PD GKP+ V + G V + EA+ GV P + Sbjct: 21 IVHVDMDAFYAQIEQRDFPDRYAGKPIAVGGDPPRGVVQTASYEARPYGVHSAQPAVEAD 80 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 ++ S ++Y + S R+ L + VE S+DEA+ D+T + R T Sbjct: 81 RKCP--DLIFVSPRMDVYQEESKRIRKILRRYTDLVEPLSLDEAYLDVTEPKTGRPSGTL 138 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R +RA + + T LT G+ K +AK+A+ K + + + Q + ++ Sbjct: 139 IARRLRAEIYEETGLTASAGVGPGKFVAKVASDLDKPDG------LTVVRPDEQMEFIAQ 192 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++ GIG + K+ +GI+T DL +T R + HF G ++ Sbjct: 193 LPIEKFHGIGPVTAAKMQELGIQTGADLQETPERTLIHHFGKRGRHFKTLAVGTDDRPVQ 252 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F E I +M + A R A++LR ++ R ++ +K+ Sbjct: 253 PDR-DRKSVGAERTFPEDIARAETMLDRLSPIAERVAQRLRQANRKGRTVTLKLKSHDHQ 311 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-- 356 ++ + + P + ++ R L + G+ + + A Sbjct: 312 VS------TRQTTVDRPLRAEDALMTITERLLRRPHPPDEPVRLLGISVSSLTDEERAGG 365 Query: 357 QLNL 360 QL Sbjct: 366 QLEF 369 >UniRef50_B7AQS7 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AQS7_9BACE Length = 413 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 94/419 (22%), Positives = 169/419 (40%), Gaps = 28/419 (6%) Query: 1 MFALCDVNAFYASCETVF-----RPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMG 52 +F DVN+ + S + DL V + G V+A++ A GV+ G Sbjct: 4 VFFHVDVNSAFLSWSALKLLKEGHDDLRLIASCVGGDEKSRHGIVLAKSILAAQAGVRTG 63 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 +P + + G+V ++ Y S +++ ++E +P VE YSIDEAF D+TG++ Sbjct: 64 EPLYMARKKCP--GLVTVKPQFDWYVKNSRAMIAIMQEFTPDVEQYSIDEAFLDMTGMQT 121 Query: 113 CRDL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + ++ + TV +GI+ + LAK+A+ K + T + Sbjct: 122 LMGPPLEAAARLKDRIRDELGFTVNIGISSNRLLAKMASDFEKPDKIHTL------FPDE 175 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 K M LPV ++G+G+ +K L+ MG T+ D+A D + + + G Sbjct: 176 IDKKMWHLPVGSLFGVGKSTAKALNNMGFYTIGDVAAADRGLLVSKLGKMGDMAWNYANG 235 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + + + S + GE ++ I S A A +LR++ + ++ Sbjct: 236 IESVAIVRHEAKENSYGNSVTTGEDVSSIDVALGIIMSLAESVALRLRTDGKKAGVVTVT 295 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + + F +S L PT + I A + L +W+A + G+ G Sbjct: 296 LVDTEFN------RHSHQCSLEYPTNTTDVIYENAQQLLYEMWKADRPVRLIGISAGKAA 349 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPR 410 + Q++LF D ++L MD + K G + A + K LS Sbjct: 350 HEEFEQMSLFAD-ERTDKLKKLDAAMDEIRNKFGEEAVVRARLLGSE----KHERLSKA 403 >UniRef50_C4F8L3 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F8L3_9ACTN Length = 432 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 101/403 (25%), Positives = 163/403 (40%), Gaps = 25/403 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 L D++AF+AS E + P+ GKPV+V + G V + EA+ GV+ + K Sbjct: 23 IGLMDLDAFFASVEQLDHPEWRGKPVIVGGSPEKRGVVSTCSYEARVYGVRSAMSSAQAK 82 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L + +++ Y +MS RVM+ L + +P V+ SIDEAF D++ R C Sbjct: 83 RLCPEA--IWTPGHFDRYREMSARVMAILADETPFVDRVSIDEAFFDISPGRFCDEHPIQ 140 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I V +T +G+ + KT+AK+A+ K + + + ++ Sbjct: 141 IAQRISRRV-SELGITCSIGLGRNKTVAKIASERDKPRG------LTIVTPGTEHGFLAP 193 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + GIG L +GI+T+ LA+ + F + E R G ++ Sbjct: 194 LPVRAMSGIGAAAESALARVGIRTLGQLAEASDGLLSPIFGINTELVRRRAAGLEVSEVR 253 Query: 239 EFAPT--KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + I R+F +TD ++ AI + +LR R ++ +K S Sbjct: 254 AIDAPDDVKSISNERTFAHDLTDPSDVKAAIQLLSESVGARLRRRGLAGRTVTLKLKYSF 313 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ-GV 355 G + KL T D A L +IW G + AGV + DF Sbjct: 314 GE------GRTIQRKLAHATDDENVFGAVARDLLASIWTEGMHIRLAGVGVSDFGPDPHG 367 Query: 356 AQLNLFDDNAPR----PGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 Q +LF R L +D L + G + F Sbjct: 368 IQTDLFCAVDERGAMASDKRDLAVTLDALRERFGNDAVAFGRS 410 >UniRef50_A0L3I2 DNA-directed DNA polymerase n=1 Tax=Shewanella sp. ANA-3 RepID=A0L3I2_SHESA Length = 416 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 156/421 (37%), Positives = 238/421 (56%), Gaps = 10/421 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + ALCD N FY+SCE +F P GKP++V+SNNDG + + EA ALG+K P+F+ + Sbjct: 4 IIALCDGNKFYSSCEQIFNPQYRGKPLIVVSNNDGMTVTLSPEAAALGLKKFTPYFQVAE 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 R GVV SSNY LY+++S++ M YSIDE F + ++L+ G Sbjct: 64 FCRANGVVVCSSNYALYSEISSQFMKVASRECFSYFPYSIDEIFAEFGNDDTPQNLSILG 123 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R++R V + L +GVG+ T TLAK ANHAAK+ GV + + ++ A+ Sbjct: 124 RKLRHDVWREVRLPIGVGLGDTLTLAKAANHAAKRLG--YRGVC-VIKAHNREAILGAML 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 DVWG+G+RI ++L +MGI T L LA + RK F V +ERT+ +L G ++ Sbjct: 181 TTDVWGVGKRIGQRLSSMGIHTALQLAQMKTKTARKMFGVNIERTIFKLNGTKAFNWDDM 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K++I +RS G+RIT +++A+ +A AA KLR + R + F +TS + + Sbjct: 241 PVNKRQIFSTRSVGQRITTIEGLKEALSFHACEAARKLRGQKSVARCLVFFAQTSAYDKH 300 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 G S ++ L PT DS I T ++++ + A Y + GV L D QL++ Sbjct: 301 GV-SGFSRTIHLPAPTSDSMIISQQITSAVESFY-AAVPYYRVGVGLLDIEP--GLQLDM 356 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F+DN +P LM+VMD LN + G+G ++ A GI+++WQM+RA LSP Y T +++ Sbjct: 357 FNDNLGKP---ALMSVMDRLNEQMGKGAVFVAANGIEKKWQMRRAFLSPSYLTNWNEIPT 413 Query: 421 V 421 + Sbjct: 414 I 414 >UniRef50_C6W6Q9 DNA-directed DNA polymerase n=3 Tax=Bacteroidetes RepID=C6W6Q9_DYAFD Length = 416 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 91/400 (22%), Positives = 160/400 (40%), Gaps = 26/400 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++ F+ S E L KP++V + G V A + E + GV G P + Sbjct: 12 ILHFDLDTFFVSVERKQDSRLQNKPILVGGTGDRGVVAACSYETRQFGVHSGMPMKMARM 71 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L V+ N E Y+ S V + + P E SIDE + DL+G+ + Sbjct: 72 LCPEATVI--RGNGETYSKHSKEVSEIISQHVPVFEKASIDEFYADLSGMDKYFNCYGMA 129 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++R +++ T L + G+A K ++K+A AK + ++ ++ + Sbjct: 130 SDLRQRIIRETGLPISFGLATNKLVSKVATGEAKPNNQLR------VEPGAEKTFLAPME 183 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V + +G ++++ L+ +GI+ V + + + + K F G + F Sbjct: 184 VQKIPMVGDKMNQTLNNLGIRYVKTIQEMPMEMMGKVFGKNGVALWNRANGLDNSPIVPF 243 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ I R+FG+ D MR+ + + A A +LR+ + +S I+ S F Sbjct: 244 H-ERKSISSERTFGKDTGDVRKMREMVRAMAETLAFQLRTGDKLTSCVSVKIRYSDFN-- 300 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 S +K+ T +I R D ++ + GV D + G Q+NL Sbjct: 301 ----TFSKQLKIA-YTSADHVLIPHIERLFDQLYNRRMMVRLVGVSFSDLVT-GNYQINL 354 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKE-----GRGTLYFAGQG 395 FDD R L MD + K G L +A Sbjct: 355 FDDTEERLN---LYQAMDYIKTKYAYNKDGDQILTWASTM 391 >UniRef50_B6WBQ9 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WBQ9_9FIRM Length = 399 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 82/405 (20%), Positives = 159/405 (39%), Gaps = 21/405 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFKQ 58 D+N+ YAS E P L K + V N G ++A++ EAK +GVK G+ ++ Sbjct: 5 ILHSDMNSCYASIEAKLNPKLKNKAMAVCGDPRNRHGIILAKSQEAKIMGVKTGEAIWQA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLT 117 K ++ +YE Y + S + + RVE + +DE + D++ Sbjct: 65 KIKCP--NLILVPPHYEKYLEFSRKARKIYYSYTNRVEPFGLDECWLDVSESLKLFGSGE 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + +IR + + +TV VG++ K AKL + K L E ++++ Sbjct: 123 EIANQIRERMKKELGITVSVGVSFNKVFAKLGSDLKKPDA------TTLIKKENFKEIVW 176 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L + + GIG+ +KL+ +GI ++ DLA TD IR + + G + Sbjct: 177 PLDISSIIGIGKATKRKLNGIGIYSLGDLAKTDSDAIRGILGINGLYLWQYANGLDDRPV 236 Query: 238 EE--FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ + + I S + E + + + +++LR + ++ F++ + Sbjct: 237 KDYSYREVIKTIGNSSTLVEDLYTNEEVYNIFQILSLNVSKRLREANLSSMGVNIFVRDN 296 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG- 354 + + PTQ S + A ++ + G+ + Sbjct: 297 N------LFSYEFQSPINNPTQSSIILSEKAIDLFKKKYKWNFPIRALGIRAINLVDDKI 350 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 AQ ++F D E L + + K + L FA ++ Sbjct: 351 PAQTDIFSDYKKIIKKENLDKAIYDIRKKYNKDVLTFASLKNNKK 395 >UniRef50_D2NU69 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Rothia mucilaginosa RepID=D2NU69_9MICC Length = 479 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 89/383 (23%), Positives = 159/383 (41%), Gaps = 25/383 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AF+ + E + P L G+P++V V + + EA+A GV+ G P + + Sbjct: 27 VIMHLDMDAFFVNVELLENPALRGEPIIVAPLGPRSVVCSASYEARAHGVRSGMPLSRAR 86 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTD 118 +L V+ + Y S VM+ L +LSP VE S+DEAF DLTG + +D Sbjct: 87 NLSPNATVLPLRGD---YRHYSRAVMAILNDLSPYVEQVSVDEAFVDLTGAYLHGQDPVA 143 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + R + Q L G+A K LAK+A+ +K + + ER ++ + Sbjct: 144 LAQSARDRIAQELSLPSSAGVAPNKLLAKMASTGSKPNG------LWVIPPERVQEFLDP 197 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 V ++WG+G + +++L GI T+ + + ++++ F E RG + Sbjct: 198 RKVSNLWGVGVKSTEQLSRYGIHTIAQMRSMSLDWLKERFGTAQGEHLWAMARGIDERPV 257 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + +F TD + AI + + ++LR+ + +S I+ S F Sbjct: 258 VTEREE-KSMGGEHTFETDTTDAQEVSAAIRELSLKLGKRLRAAGKLAGGLSLKIRYSTF 316 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-----AGHRYQKAGVMLGDFFS 352 ++ ++ L P I + A +L A A + GV Sbjct: 317 E------THTRAIALNVPVDSGMQIASLALEALRADEILVGQAAPRALRLIGVRAEKLAH 370 Query: 353 -QGVAQLNLFDDNAPRPGSEQLM 374 + Q LFD S + Sbjct: 371 AEDGVQQTLFDSIESGANSRSIQ 393 >UniRef50_A9KLV9 DNA-directed DNA polymerase n=8 Tax=Clostridiales RepID=A9KLV9_CLOPH Length = 432 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 98/413 (23%), Positives = 160/413 (38%), Gaps = 26/413 (6%) Query: 1 MFALCDVNAFYASCETVFRP-------DLWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 +F DVN+ + S E +R DL P V+ N G V+A++ AK L + Sbjct: 18 IFFHIDVNSAFLSWEAAYRLHVLGESVDLREIPSVIGGDKENRHGIVLAKSTSAKKLKIH 77 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+ +V NY+ Y S +M L SP+VE YSIDEAF D++G Sbjct: 78 TGEALGAAVQKCP--NLVIIPPNYQRYVKASKSLMEILHRFSPKVEQYSIDEAFVDMSGS 135 Query: 111 RNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 ++ + + TV +G++ K LAK+A K T Sbjct: 136 ELLYGGPVIVANNLKDLIEEELKFTVNIGVSSNKLLAKMAGELKKPNLVHTM------FP 189 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 E K M LPV +++ +GR KKL +GIKT+ +LA TD++ ++ HF E + Sbjct: 190 EEIPKKMWPLPVGELFFVGRATEKKLFNLGIKTIGELAQTDVKILKAHFGKYGEVLYQFS 249 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G L + S + I + S + +LR + + +S Sbjct: 250 HGIDESPLFVPLEANKGYGNSVTTPYDIVTMEHANLVLLSLSETVCTRLRMDGVKGQCVS 309 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 + T F S L + + + ++ A R +W ++ GV Sbjct: 310 VSVTTDTFQ------RASHQGMLFSASNTTMEVYRFACRLFKNLWDGRTPIRQMGVHTSR 363 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 + Q NLFD +L +D++ + G ++ A + M Sbjct: 364 ITKESTMQYNLFD-WDRYEKLSKLDETIDSIRKRYGDDSVMRACFLNTSTYHM 415 >UniRef50_D2MQ51 Putative DNA polymerase IV n=1 Tax=Bulleidia extructa W1219 RepID=D2MQ51_9FIRM Length = 395 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 100/387 (25%), Positives = 170/387 (43%), Gaps = 24/387 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQK 59 ++ D+NAF+AS E + P L GKP+VV V + EA+A G+ K Sbjct: 4 IYFHVDLNAFFASAEILRDPSLKGKPIVVSGQTKRSVVSTASYEARAYGIHSAMSIILAK 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTD 118 L ++ +Y Y +S+ M+ + SP +E SIDE + D+T ++ + D Sbjct: 64 KLCPDLEII--EGHYSYYRSLSDEFMTIVRSFSPYMEKASIDECYVDVTDVIQQYKHPLD 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++ + Q+T L +GI LAK+A+ K + + + + Sbjct: 122 LAVLLQKAIYQKTGLGCSIGIGPNLFLAKMASDMKKPMG------ITVLRIRDVEAKLWP 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADT-DIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV + GIGR+ K++A+GIKT+ DLA+ I+ + K F + + + RG L Sbjct: 176 LPVHKMRGIGRKTLPKVEALGIKTIGDLANYQPIQDLGKIFKNSTDSLLEKCRGIDRTPL 235 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E ++ + S + E I+DY +R + S + + +L E + R IS I F Sbjct: 236 -ELDWQRKSLGVSETLLEDISDYEELRGLLRSLSKKLHHQLEKEKRIGRAISIRITYYNF 294 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV-- 355 S S+ + DI + A + D W+ + G+ + DF + Sbjct: 295 R------NVSRSLSVKQGIYLEPDIFDLALQLFDQYWEYDEPVRLLGITITDFMDEHQAI 348 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNA 382 QLNLF++ P ++D +N Sbjct: 349 QQLNLFEEEKIDPTQ----QIIDEINR 371 >UniRef50_A1KUQ3 DNA polymerase IV n=34 Tax=Proteobacteria RepID=DPO4_NEIMF Length = 352 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 78/363 (21%), Positives = 150/363 (41%), Gaps = 20/363 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E +P L G+PVVV + A + EA+ G+ K Sbjct: 6 IIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICAASYEARQFGLHSAMSVATAKR 65 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L + V +++LY +S ++ + + +E S+DEA+ D+T +N ++ Sbjct: 66 LCPQA--VYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLSLDEAYLDVTRNFKNIPYASEV 123 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +EIRA + T LT GIA K LAK+A+ K + + + + L Sbjct: 124 AKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQF------VLPPHKVMAFLETL 177 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G+ KK+ ++G++T DL + + HF R +RG ++ Sbjct: 178 PLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGRYGYRLYDLVRGTDERPVKA 237 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + +I + E + + A ++ ++ + ++ +KT F + Sbjct: 238 ER-ERLQISTEITLPEDLP-LEQAAGHLPHLAEDLWRQITRKNVEAQSVTLKLKTYDFRI 295 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR-YQKAGVMLGDFFSQGVAQL 358 + S L D ++ AA + + ++ G+ +G + Q Sbjct: 296 ITR--TLTYSSVLP----DCAALLQAAQMLIARVPPQTEDAFRLIGIGVGHLVPKNQQQ- 348 Query: 359 NLF 361 +L+ Sbjct: 349 DLW 351 >UniRef50_C7RFL5 DNA-directed DNA polymerase n=3 Tax=Anaerococcus RepID=C7RFL5_ANAPD Length = 413 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 82/404 (20%), Positives = 160/404 (39%), Gaps = 21/404 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D+NA YAS E P L G P+ V N +G ++A++ EAK GVK G+ ++ Sbjct: 4 VILHSDMNACYASIEQKLNPKLKGIPMAVAGNPKNRNGIILAKSQEAKEAGVKTGEALWQ 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL- 116 + +Y+ Y S E + +VE + +DE F D+TG + Sbjct: 64 AFAKCP--DLTIVPPHYDEYLKHSKLARKIYYEYTNQVEPFGLDECFLDVTGSAHLFGTG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + +IR + + +TV VG++ K AKL + K V + + ++++ Sbjct: 122 EEIANKIRERMKEEVGITVSVGVSFCKIFAKLGSDMKKPDA------VTIIGEDNFKEIV 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV ++ G+GR +KL+ +GI T+ +LA+TD IR + G Sbjct: 176 WPLPVREMVGVGRATERKLNGIGIFTLGELANTDPDLIRNLLGINGVYLWEYANGLDIRP 235 Query: 237 LE--EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + I S + + + + + + + +++LR + F++ Sbjct: 236 VHDRDHKEPVKTIGNSSTCRKDLVNNREVFNVLQELSFSVSKRLRQAGLEAFGVEIFVRN 295 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ- 353 + + + +Q S + ++ + G+ + Sbjct: 296 NE------LQSYNFQKPIKLASQSSIVLAREGFDLFKEKYKWDFPVRAVGIRAIKLRKEG 349 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 G +Q+++F D E T + + K G+ + F G Sbjct: 350 GGSQMDVFSDYKKLIKDENCDTALYKIRQKYGKDAISFLGLMRD 393 >UniRef50_B1YK83 DNA polymerase IV n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=DPO4_EXIS2 Length = 360 Score = 369 bits (947), Expect = e-100, Method: Composition-based stats. Identities = 85/363 (23%), Positives = 144/363 (39%), Gaps = 21/363 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E RP L G PV+V + G V + EA+ G+ P + Sbjct: 6 IIHVDMDAFYASVEQRDRPHLKGVPVIVGGPPHARGVVATCSYEARKYGIHSAMPSRRAF 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTD 118 L R V +E+Y +S ++M E++P VE S+DEA+ D+T T Sbjct: 66 QLCPRA--VFVRPRFEVYRAVSAQIMELFLEVTPLVEPLSLDEAYLDVTENNLQMTSATH 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I A + +RT LT G++ +K +AK+A+ K + + + +S Sbjct: 124 IAQYILAEIKRRTGLTASAGVSNSKLVAKIASGHQKPNG------LTVLPPDAVLPFLSG 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQL 237 L + D+ G+G+ + L G TV D+ + I +R GE + Sbjct: 178 LKIGDLHGVGKVTEQTLQKHGFNTVADIQQSPIAELRGLLGRDRGTELYTMAHGEDERMV 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ I +F E D ++ + + A + L + CR ++ KT F Sbjct: 238 RPHRE-RKSIGSESTFEEDTEDIDTIFETLKREALSVVKTLNQKELVCRTVTIKWKTEDF 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-SQGVA 356 S L T D ++ T+ + I +G + G+ + Sbjct: 297 Q------SRSKRYTFLEETADEDTLLRVTTKLFNEIEFSG-PIRLIGMSVSHLEAPPLSK 349 Query: 357 QLN 359 QL Sbjct: 350 QLT 352 >UniRef50_A8RBK8 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RBK8_9FIRM Length = 389 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 91/403 (22%), Positives = 164/403 (40%), Gaps = 23/403 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+N+F+AS E + L G+PVVV + V + EA+ GV P Sbjct: 5 VIFHIDLNSFFASAEVLKNSALEGQPVVVAGMHRRSVVSTASYEARNYGVHSAMPLHMAL 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 + + +V +Y Y ++S R + ++ SP +E SIDE + D+T D Sbjct: 65 EKCPQ--LVVVQGDYAWYEELSRRFFNYVKRFSPYLEPASIDECYIDVTEAIRAYKRPLD 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+ V + L +G+ +K LAK+A+ K + + + + + Sbjct: 123 LAWRIQKGVYEDLRLPCSIGVGPSKFLAKMASDMRKPMG------ITVLRRQEIERKLWP 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLAD-TDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L + D++GIG++ L+ GI T+ D A+ + I + ++ RG +L Sbjct: 177 LSIADMFGIGKKTVPLLERQGIYTIGDFANPANEAKIMALMGKHAYQLIQNARGFGSNRL 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + Q I S + I +Y ++ A + +++ + E IS I+ + F Sbjct: 237 DYNTSV-QSISQSTTLDTNIVEYEEVKSVFKRLANKLSQRAKQEDLRGALISISIRYADF 295 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA- 356 S + T D+ ++ A D G + G+ LG FS+ Sbjct: 296 TNAV------RSTTISEYTNDADVLLEHALLLFDQHNN-GKEIRHLGIGLGSLFSKTRTV 348 Query: 357 -QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 Q+NLF D P ++ LN + G L A + +++ Sbjct: 349 DQINLFQDVKAEPTDS--TDILKQLNKQLSTGKLMKASELLKK 389 >UniRef50_B9YCM9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCM9_9FIRM Length = 409 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 102/405 (25%), Positives = 173/405 (42%), Gaps = 24/405 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAF+AS E + P L GKPVVV V + EA+ GV P + Sbjct: 16 VIYHIDLNAFFASAEILLDPSLEGKPVVVSGLTKRSVVSTASYEARQFGVHSAMPINEAL 75 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L + +V ++ Y +S + +S +++ + RVE SIDE + D++ + D Sbjct: 76 KLCPQ--LVVVKGHHGYYEQLSEQFISYVKKYTDRVEQASIDECYADMSQAIHRFPRPLD 133 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +++ +L HL +G+A K LAK+A+ K G+ L E K + Sbjct: 134 LAWQLQQELLTDLHLKCSIGVAPNKFLAKMASDMKKP-----MGITVLRKQEVPVK-LWP 187 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++D+ GIG++ + ++ A+GIKT+ DLA D +R ++ GE ++ Sbjct: 188 LPIEDMRGIGKKTAPQMKALGIKTIGDLAAADPEQLRPLLGKNTMTYIQRANGEDDREII 247 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 A + + S + + +R A + +E++ E + +S I+ F Sbjct: 248 SDAEI-KSMSQSTTLNYDFSTEEEVRTLFRKLANKLSERMIEEDKMGTIVSISIRYFDFN 306 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QGVA 356 N S KL P S D+ A D + + G+ +G S Sbjct: 307 ------TNVRSRKLDHPVYRSEDLFELAMELFDENY-EDQPMRHLGIGVGSLSSIHDQKI 359 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAK--EGRGTLYFAGQGIQQQ 399 Q+NLF+ P L ++ LN + G G L A I++ Sbjct: 360 QMNLFEAPPVDPACATLD-LISQLNQQLTLG-GKLTTAAALIKKT 402 >UniRef50_Q8UFV3 DNA polymerase IV 1 n=118 Tax=Alphaproteobacteria RepID=DPO41_AGRT5 Length = 405 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 92/394 (23%), Positives = 164/394 (41%), Gaps = 21/394 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AFYAS E P+L KPV+V G V A+ GV+ P FK + Sbjct: 23 IAHIDCDAFYASVEKRDNPELADKPVIVGGGKRGVVSTACYIARIHGVRSAMPMFKALEA 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 V + E Y+ + + + ++EL+P V+ SIDEAF DL+G Sbjct: 83 CPDA--VVIKPDMEKYSRVGREIRTMMQELTPLVQPLSIDEAFLDLSGTEKLHHDPPARV 140 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + V + ++V G++ K LAK+A+ K + ++A Sbjct: 141 LAKFTGRVEKEVGVSVSAGLSYCKFLAKVASDLQKPRG------FSVVGEAEALSFLAAR 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G+ + L+A GI+ + L + + + + + V+ +R R RG + Sbjct: 195 PVTTIWGVGKAFAATLEADGIRMIAQLQEMEESELMRRYGVMGQRLFRLARGIDERHVHN 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P + + +F I+ + + + S + + A +L+ + + +KT+ F Sbjct: 255 NDPV-KSVSSETTFFHDISRHEDLVPILRSLSEKVAWRLKKSGIAGQTVVLKMKTADFK- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-VAQL 358 + + +L PTQ + I L+ G +++ G+ + D G Sbjct: 313 -----SRTRNRRLDDPTQLADRIFRTGLALLEKETD-GTKFRLIGIGVSDLRDAGLADPP 366 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 +L D A R + MD L K G+G++ Sbjct: 367 DLVDRQATRRAAA--EAAMDKLRDKFGKGSVETG 398 >UniRef50_C1F962 Putative DNA polymerase IV n=2 Tax=Bacteria RepID=C1F962_ACIC5 Length = 374 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 83/357 (23%), Positives = 140/357 (39%), Gaps = 19/357 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P+L GKPVVV V A + EA+ GV+ P + Sbjct: 16 IVHVDMDAFYASVEQRDAPELRGKPVVVAWRGRRSVVCAASYEARQFGVRSAMPAVTAER 75 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDF 119 L + + ++ Y +S V E + +E S+DEA+ D+T + T Sbjct: 76 LCPQA--IFVPPDFTRYKAVSRAVREIFERHTDLIEPLSLDEAYLDVTHNKTGLPTATKV 133 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IR + + LT G+A K LAK+A+ K + + + + L Sbjct: 134 AITIRRQIREELSLTASAGVAPNKFLAKIASDWRKPDG------LFVIQPQDLATFLPPL 187 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V + G+G+ ++L +GI+T DL D+ + +F R RG + Sbjct: 188 AVGRIPGVGKVTEERLARLGIRTAGDLQHYDLATLESNFGRYGLRLYHLARGVDHSPVTP 247 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 PT + + +F I + I + + R E + R + +KT F + Sbjct: 248 NRPT-KSVSAEDTFEADIP-LSATEPVIRRLSEKVWNASRREARIARTVVLKLKTGDFHI 305 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQGV 355 + + S+ TP ++ A + + A Y+ GV L +F Sbjct: 306 H------TRSLTPETPPASCEELTAIALSLRERVDLGADRLYRLIGVGLSNFRDPEP 356 >UniRef50_Q8VMP6 RuvB protein n=4 Tax=Pseudomonas RepID=Q8VMP6_PSEPU Length = 402 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 177/398 (44%), Positives = 243/398 (61%), Gaps = 4/398 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +F L DVN+FY SCE +FRP+L +PVVVLSN+DGC++AR EAKALG+KMGDP+FK ++ Sbjct: 9 IFGLVDVNSFYCSCERIFRPELRHRPVVVLSNSDGCIVARTNEAKALGLKMGDPYFKVRN 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + GV FSSNY LY ++S+RV + L P E YSIDE F +L G+ + D G Sbjct: 69 FLEQNGVAVFSSNYTLYGELSHRVGVAIASLVPEWEQYSIDELFVNLDGLPEP--IIDVG 126 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R I+A VLQ T L VGVGI TKTLAK A HA+K W+ +TGGVVDL + L+ +P Sbjct: 127 RAIQARVLQWTALPVGVGIGHTKTLAKAAQHASKVWREKTGGVVDLRKPDAVEWLLRRMP 186 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 VD+VWGIG R+ L GI T +L+ D R + + ++VVLERT+REL+GE C+ LE+ Sbjct: 187 VDEVWGIGSRMRDNLARDGITTAWELSQADARAMGRKYSVVLERTIRELQGESCMDLEQT 246 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 KQ I S+ FG+R+ +++A+ +Y RAAEKLR + C + I+TS F + Sbjct: 247 VAPKQTICSSKMFGQRVHTLQGLQEALATYIHRAAEKLRLQRSLCGAMRIGIQTS-FHGD 305 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y N+A+ PT D R + A ++ + I++ G Y KA V+L D +G +L Sbjct: 306 GPKYANAATCIPAYPTDDVRQLTKYALQAAEQIYRPGFAYSKAEVLLLDLRKRGEYTQDL 365 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 F + P S+ LM MD +N + G L A Sbjct: 366 FSPSQP-ERSDALMATMDKINRRWGHDCLRTAAGATDP 402 >UniRef50_Q6AL48 DNA polymerase IV n=1 Tax=Desulfotalea psychrophila RepID=DPO4_DESPS Length = 376 Score = 366 bits (940), Expect = e-99, Method: Composition-based stats. Identities = 80/353 (22%), Positives = 136/353 (38%), Gaps = 18/353 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+AS E RP+L KP++V G V EA+ G+ + Sbjct: 6 IIHIDMDAFFASIEQRDRPELRKKPLIVGGLPRGRGVVATCCYEARRYGIHSAMSANRAY 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L V LY ++S ++M+ E + +VE S+DEAF D+T T Sbjct: 66 KLCPHA--VFVKPRMVLYKEVSLQIMAIFREYTKKVEPLSLDEAFLDVTEYLQINGSATL 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REI A + RT L+ G++ K LAK+A+ K T E R+ + Sbjct: 124 LAREICALIKLRTDLSASAGVSYNKFLAKIASDLKKPGGIST------VPPEEARQFIDR 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + +G+G+ K+ ++GI+T DL F+ K F RG + Sbjct: 178 LSIGKFYGVGKITKSKMQSLGIQTGKDLRQYSKDFLMKRFGKAGSFFFYNARGLDERPVC 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + ++ I + + +R + + ++ + L + Q + ++ I+ S F Sbjct: 238 PYQN-RKSIGKETTLVQDTNRPEEIRDILINLSSLLGKALENNSQLAQTLTLKIRYSDFT 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + S+ L P DI L + G+ L Sbjct: 297 ------TTTRSLSLQKPFSCPADIEECLPSLLTNCNLTHKPIRLLGISLSKLT 343 >UniRef50_B0VP90 DNA polymerase IV, devoid of proofreading, damage-inducible protein P n=12 Tax=Acinetobacter RepID=B0VP90_ACIBS Length = 363 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 142/347 (40%), Gaps = 19/347 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E RPDL PVV+ + + A + A+ G++ + + Sbjct: 4 IIHIDMDAFYASVELRERPDLRHLPVVISSHHPRAVIAAASYPAREFGLRSAMSMSQARK 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDF 119 L + VV N+E Y +S ++ S ++ + +E S+DEA+ D+T ++ T+ Sbjct: 64 LCPQ--VVIIEPNFEKYRAISAQIHSIFQQYTTLIEPLSLDEAYLDVTENLKQIASATEV 121 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IR + ++T LT G+A K LAK+A+ K + + + + L Sbjct: 122 AMHIREDIFRQTGLTASAGVAPNKFLAKVASDWNKPNG------LFVIKPSQVASFIQDL 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G+ +KL + + T+ DL + + HF ++ +G ++ Sbjct: 176 PLKKIPGVGKVTQEKLQQLELHTLGDLQKIEEAVLVHHFGKYGQQLYLYAQGIDNRPVQA 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q+I +F T + A + + L + R ++ +K F Sbjct: 236 ER-ARQQISKETTFDSDFT-LAQCQSYWHGLAEKVWQSLEKKQLNARGVNIKLKLKNFQ- 292 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA-GHRYQKAGV 345 S P +D+I L+ + +++ GV Sbjct: 293 -----TLQHSKSFKNPIHSQQDLIQVLFLLLNEMHIPENFQFRLIGV 334 >UniRef50_C7QBJ0 DNA-directed DNA polymerase n=3 Tax=Actinomycetales RepID=C7QBJ0_CATAD Length = 834 Score = 364 bits (936), Expect = 3e-99, Method: Composition-based stats. Identities = 93/392 (23%), Positives = 149/392 (38%), Gaps = 39/392 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E + +P L GKPVVV N G V + EA+A GV + Sbjct: 12 IFHVDLDAFYASVEQLHKPSLRGKPVVVGGIGNRGVVSTASYEARAFGVHSALATGIARR 71 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL----------TGV 110 + + Y S RVM+ + ELSP VE S+DEAF D+ T Sbjct: 72 RAPNAAYLI--PRFGAYQAYSERVMALMHELSPLVEPLSLDEAFIDISHLFGSLDTTTPH 129 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + ++R + T LT VG +K +AK+A+ A K + + Sbjct: 130 NATLEARRIAEDLRTRIKNETGLTASVGAGTSKLIAKIASDAEKPDG------LVVIEPG 183 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVREL 229 ++ + LPV +WG+G +++L +G TV DL + + Sbjct: 184 TEQTWLDPLPVRALWGVGPATAERLRKIGATTVADLRTLSLTELTTVVGASYGTTLYAIA 243 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 RG+ + + + ++ E + D ++ + R + ++R + R I+ Sbjct: 244 RGQDDRDVSTDREM-KSVSVEDTYAEDLLDPATITAHMDDLVTRLSTRIRKAGRSGRTIT 302 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL----DAIWQAGHRYQKAGV 345 ++ F S S PT D I A R L A Q+ + GV Sbjct: 303 IKVRGHDFT------TVSRSETTPNPTDDLTTIRAATHRMLPGAVAAATQSVPGIRLLGV 356 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVM 377 L AQ++LF L + Sbjct: 357 GLTGL--AEWAQVDLFTAAED------LDAAL 380 >UniRef50_B9JVH1 DNA-damage inducible protein n=18 Tax=Alphaproteobacteria RepID=B9JVH1_AGRVS Length = 428 Score = 364 bits (936), Expect = 3e-99, Method: Composition-based stats. Identities = 90/393 (22%), Positives = 161/393 (40%), Gaps = 21/393 (5%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 A D +AFYAS E PDL KP+++ G V A+ GV+ P FK + Sbjct: 46 AHIDCDAFYASVEKRDNPDLIDKPLIIGGGKRGVVSTACYVARIHGVRSAMPMFKALEAC 105 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFG 120 V N E Y+ + +V + +EEL+P V+ SIDEAF +L G Sbjct: 106 PDA--VVIPPNMEKYSRVGRQVRAMMEELTPLVQPLSIDEAFLELKGTEALHHAPPALVL 163 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + +TV VG++ K LAK+A+ K + ++ P Sbjct: 164 ARLARRIESEIGITVSVGLSYCKFLAKVASDLQKPRG------FSVVGEAEALDFLAPRP 217 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +WG+G+ + L+ GI+T+ L + + + + + +R R +G + Sbjct: 218 VTTIWGVGKAFASTLEKDGIRTIGQLQTMEESDLIRRYGSMGQRLARLSKGIDDRDVHTN 277 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P + + +F + I+ + + + + A +L+ + + +K++ F L Sbjct: 278 DPA-KSVSAETTFFDDISRREDLVPHLRKLSEKVAWRLKKQELAGHTVILKLKSADFKL- 335 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-VAQLN 359 + + +L PTQ + I + L+ G +++ G+ + DF + Sbjct: 336 -----RTRNRRLDDPTQLADRIFRTGLQMLEKEAD-GTKFRLIGIGISDFADPSLADPPD 389 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 L D +A R MD L K G+G + Sbjct: 390 LVDPDAARRAKA--EAAMDQLRMKFGKGMVETG 420 >UniRef50_A8RF31 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RF31_9FIRM Length = 413 Score = 364 bits (935), Expect = 4e-99, Method: Composition-based stats. Identities = 84/416 (20%), Positives = 158/416 (37%), Gaps = 24/416 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + D+N YA E + P L + V + G ++A+N +AK GVK G+ + Sbjct: 4 VILHSDINHCYAQIEEMKFPQLREVCMAVGGSERSRHGIILAKNDKAKECGVKTGESLRE 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDL 116 + + NYE Y S +V + S +VE + +DEA+ D++ Sbjct: 64 AFVKCPQ--LCIIPPNYEEYVYYSEKVKEIYQAYSDKVESFGLDEAWIDVSESTKLFGSG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + EI+ V L+V +GI+ K AK+ + K + R ++ Sbjct: 122 YEIATEIQKRVKDELGLSVSIGISYNKVFAKMGSDMKKNMG------LVEITRTNFRDML 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP++ ++ +G+ +KKL I T+ +LA ++++HF + E G+ + Sbjct: 176 WPLPIEHLFYVGKATAKKLRQYSIVTIGELAQLPRVWLKEHFGKMGELVWWFANGQDISE 235 Query: 237 L--EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + I + + + + A A +LR + IS ++ Sbjct: 236 VAFHNQKEEVKSIGNGITTPRDLCTFEEAKIVFYVLAESVASRLREQGLQGNVISISLR- 294 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-Q 353 N+ + K+ T + +I+ L + + V + + Sbjct: 295 -----NKYLESITRQCKIDKATNLASEIMEHILLLLKENYDFHIPLRSVAVSISGIQYME 349 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ---QWQMKRAM 406 QLNLF D ++L V+D + K G + I Q +Q +R Sbjct: 350 CYRQLNLFVDEKNYQKQQRLEQVVDDIRKKYGFKKIQRCCMLIDQGLSDFQPQRDH 405 >UniRef50_Q04M21 DNA polymerase IV n=98 Tax=Bacilli RepID=DPO4_STRP2 Length = 353 Score = 364 bits (935), Expect = 4e-99, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 146/355 (41%), Gaps = 21/355 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-----NNDGCVIARNAEAKALGVKMGDPWF 56 D++AF+A+ E P L GKPV++ S G V + EA+A GV Sbjct: 14 IIHIDMDAFFAAVEIKDNPKLRGKPVIIGSDPRQTGGRGVVSTCSYEARAFGVHSAMSSK 73 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRD 115 + + + V S NYE Y + ++ + + + +E SIDEA+ D+T + Sbjct: 74 EAYERCPQA--VFISGNYEKYKAVGLQIRAIFKRYTDLIEPMSIDEAYLDVTENKLGIKS 131 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 R I+ + Q HLT GI+ K LAK+A+ K + + E+ Sbjct: 132 AVKIARLIQKDIWQELHLTASAGISYNKFLAKMASDYQKPHG------LTVILPEQAEDF 185 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + + + G+G++ ++L MG+ T DL + + F + R+ RG Sbjct: 186 LKQMDISKFHGVGKKTVERLHQMGVFTGADLLEVPEVTLIDRFGRLGYDLYRKARGIHNS 245 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ ++ I +++G+ + +++ + + + A L + + + + I+ Sbjct: 246 PVKSNR-IRKSIGKEKTYGKILRAEEDIKKELTLLSEKVALNLHQQEKAGKIVILKIRYE 304 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 F+ + + TQD+ I A + + + + + G+ + F Sbjct: 305 DFS------TLTKRKSIAQKTQDASQISQIALQLYEELSEKERGVRLLGITMTGF 353 >UniRef50_UPI0001982DE6 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001982DE6 Length = 1137 Score = 364 bits (934), Expect = 5e-99, Method: Composition-based stats. Identities = 72/369 (19%), Positives = 134/369 (36%), Gaps = 23/369 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALGVKMGDPWF 56 + D++ F+ S P+L KPV V +N+ + + N A+ GVK G Sbjct: 396 VIIHMDMDCFFVSVVIRNNPELQDKPVAVCHSNNPKGTAEISSANYPARDYGVKAGIFVR 455 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 K L +V F N+E Y +++++ + L + +V+ S DEAF ++ + D Sbjct: 456 DAKALCPH--LVIFPYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEVMDSKE-GDP 512 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 IR + + T T GIA +A+LA +AK + +++ + Sbjct: 513 ELLASIIRKEIFETTGCTASAGIAGNLLMARLATRSAKPNGQCY------IPVDKVDDYL 566 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCL 235 LP+ + GIG + +KL + T L +++ F + RG Sbjct: 567 HQLPIKALPGIGHVLEEKLRRRKVHTCGQLRMISKESLQRDFGTKTGDMLWNYCRGVDNR 626 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT- 294 + + I ++G R D R + + +L+ R + +K Sbjct: 627 VVG-VIQESKSIGAEVNWGVRFNDLKDSRHFLVNLCKEVTLRLKGCGVQGRTFTLKMKKR 685 Query: 295 -------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + + S S+ + T D I AT+ + G+ + Sbjct: 686 RKDAGEPAKYMGCGDCENLSHSMTVPLATDDVDVIQRIATQLFGFFHIDVKDIRGIGLQV 745 Query: 348 GDFFSQGVA 356 + A Sbjct: 746 SRLENADTA 754 >UniRef50_B0MAH2 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAH2_9FIRM Length = 402 Score = 364 bits (934), Expect = 5e-99, Method: Composition-based stats. Identities = 89/407 (21%), Positives = 157/407 (38%), Gaps = 28/407 (6%) Query: 1 MFALCDVNAFYASCE-------TVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVK 50 + DVN+ Y S E DL P ++ + G V+A + AK G++ Sbjct: 7 VIFHIDVNSAYLSWEAVYGISVRKDEVDLREVPSIIGGDESKRRGIVLAASIPAKKKGIR 66 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 + + + ++ + +Y S + + SP +E +SIDEAF D+T Sbjct: 67 TAETVREALNKCP--DLIIRPPCHGMYDKFSKAFLKEALKFSPVLEKFSIDEAFLDMTET 124 Query: 111 R-NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + + ++ + ++ TV +G+A K LAK+A+ K + V L Sbjct: 125 VGQYKSPYEAACLLKDRIYEKLGFTVNIGVAPNKLLAKMASDFEKPNK-----VHTLFRE 179 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRE 228 E K M LPV+++ +G KKL +GI+T+ +LA + ++ H + Sbjct: 180 EVPNK-MWPLPVENLLFVGPATKKKLHNLGIRTIGELAHINPELLKSHIGNKHGIQIYEY 238 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G +E + S + I + S A A +LR++ I Sbjct: 239 ANGIDRAPVEAQQADSKGYGNSITLPSDIDSLEEADTVVLSLAETVASRLRADRVKASCI 298 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + IK F +S KL PT + +I+ AA ++ G + GV Sbjct: 299 TVEIKDCQFR------RSSHQKKLFAPTDITNEIVQAAKELYREKFR-GTSVRLIGVRAS 351 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 D + AQ++ D + L +D + K G+ + A Sbjct: 352 DITKEEFAQMDFLSD-KKKEKLRMLDQSIDAIRIKYGKDAVQRARFL 397 >UniRef50_B9YDA2 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDA2_9FIRM Length = 469 Score = 363 bits (933), Expect = 6e-99, Method: Composition-based stats. Identities = 91/405 (22%), Positives = 169/405 (41%), Gaps = 21/405 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D+N YA E + P+L +P+ V + G ++A+N AK ++ G+ + Sbjct: 52 IVHSDINHCYAQIEEMLNPELKQRPMAVGGSQEERHGIILAKNLHAKKYKIQTGETLDEA 111 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-T 117 + + ++ +Y Y ++++V + E + RVE Y +DEA+ DLT + + Sbjct: 112 RIKCPQ--LLILPPDYRRYQRITDQVKAIYREYTDRVEEYGLDEAWLDLTQSQRLFGPAS 169 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 R I+ V LT+ +G++ K AK+A+ K ++ + Sbjct: 170 QIARTIQQRVYAELGLTISIGLSFNKIFAKMASDFVKPSG------FVTITRANFQEKIY 223 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V +++ +G KKL+A GI T+ DLA D +F+R++F V E GE ++ Sbjct: 224 PLSVRELFYVGAATQKKLEAWGITTIGDLASRDRQFMRRYFGKVGEMLHWFALGEDISEV 283 Query: 238 EEFAP--TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + + S + + + R + A A +LR + + I+ ++ Sbjct: 284 ALASEAIPVKSVGNSVTAVHDLHTHGEARLVLRVLAESVASRLRDQGLKGKGIALSLR-- 341 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-SQG 354 + + S K PTQ + +I+ A L WQ + G+ + D Q Sbjct: 342 ----DIHLFRWSLQRKRARPTQLAEEILEDAEILLRQAWQNALPLRSIGISVFDLCLDQT 397 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 QL+LF D R QL +D + + G + + + Sbjct: 398 GEQLDLFVDEQHRQSLLQLEKTVDGIRRRFGFEKIQRCSLLLDKP 442 >UniRef50_C5CA41 DNA polymerase IV involved in DNA repair n=3 Tax=Micrococcus luteus NCTC 2665 RepID=C5CA41_MICLC Length = 431 Score = 363 bits (932), Expect = 8e-99, Method: Composition-based stats. Identities = 92/408 (22%), Positives = 156/408 (38%), Gaps = 29/408 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ S E +PDL G+P V + V++ + A+A GV+ P + Sbjct: 15 ILHVDMDAFFLSVELREQPDLEGRPAAVAAPSGRSVVLSASYAARAYGVRSAMPLAHARA 74 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDF 119 L +V +LY +S VM+ L +++P +E S+DEAF D+ G R Sbjct: 75 LCP--PLVVIPPRQQLYRAVSAEVMAVLADVTPVMEQLSVDEAFLDVAGARRRLGPPEHI 132 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G IR V L VG + K +AK A+ AAK + + +R + L Sbjct: 133 GHLIRERVRSALGLPCTVGGSAVKFVAKTASTAAKPDG------LLIVPPQRTLDFLHPL 186 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G + +++L G+ T+ DLA D + F RG + Sbjct: 187 PVGRLWGVGPKAAERLARRGVATIGDLARVDPARLEASFGAAGREWASLARGIDPRPVAP 246 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I +F D + + R A +LR+E ++ +K ++ Sbjct: 247 RPAAR-SIGADHTFDVDPVDVVGVDPEVLRLCHRVAARLRAEQVTAGAVTVRLKAPDGSV 305 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDF---FSQGV 355 S + +L PT D++ A R + + + H + GV Q Sbjct: 306 ------RSRTARLARPTATGHDLLGPARRLVRELHAERPHPVRLVGVRAERLGDEADQPP 359 Query: 356 AQLNLF--------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 AQ LF + + +D + + + A Sbjct: 360 AQEALFGGPAWGTEGEASEAGDWAGAEAALDAVARRFPTAAVRPASLL 407 >UniRef50_Q72MY7 DNA polymerase IV n=18 Tax=Bacteria RepID=DPO4_LEPIC Length = 364 Score = 363 bits (932), Expect = 8e-99, Method: Composition-based stats. Identities = 83/370 (22%), Positives = 155/370 (41%), Gaps = 26/370 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P+ GKP++V N+ V A + EA+ GV+ P K Sbjct: 8 IIHVDMDAFYASVEQRDFPEYKGKPLIVGGPPNSRSVVSAASYEARKFGVRSAMPCSKAA 67 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L + + +E+Y ++S ++ E + VE+ S+DE + D+T +N Sbjct: 68 QLAPQA--IFVFPRFEVYKEVSKQIREIFLEYTDLVEMLSLDEGYLDVTFNKKNIPFAVT 125 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +EIR + +RT LT G+ +K ++KLA+ K + + + + Sbjct: 126 IAKEIRTEIFKRTELTASAGVGNSKFISKLASEKNKPNG------LTVVLPDDVISFIDP 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV G+G+ ++K+ +GI T DL I + +HF + + RGE ++ Sbjct: 180 LPVSSFHGVGKVTARKMKELGIYTGKDLRTKSIDELVQHFGKMGIYYYKISRGEDERMVQ 239 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F DY + + + A +L + + ++ IK F+ Sbjct: 240 SSR-ERKSLGAESTFDRDKLDYDDLLKQLKDVAVVVERRLEKKDFAGKTLTLKIKFYDFS 298 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-------RYQKAGVMLGDFF 351 L + S L P + ++ + A + ++ + + G+ L Sbjct: 299 LK------TRSKTLSEPIFKADELYSTAIELFEEFFEIKYGKKSAIKAIRLLGISLSHPN 352 Query: 352 SQGVAQLNLF 361 S+ NLF Sbjct: 353 SENED-PNLF 361 >UniRef50_B0BPX9 DNA polymerase IV n=222 Tax=cellular organisms RepID=DPO4_ACTPJ Length = 356 Score = 363 bits (932), Expect = 9e-99, Method: Composition-based stats. Identities = 81/371 (21%), Positives = 138/371 (37%), Gaps = 31/371 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FYA+ E P L GKPV V + G + N EA+ G+ P + Sbjct: 7 IIHIDMDCFYAAIEMRENPALIGKPVAVGGSVEGRGVLTTCNYEARKFGLHSAMPTAQAL 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 ++ N LY +S ++ + VE S+DEA+ D+T R C T Sbjct: 67 KRCP--NLILVPVNMPLYKAVSEQIHQIFRRYTDIVEPLSLDEAYLDVTDCRQCSGSATW 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +EIR + HLT GIA K LAK+ + K + + + E + Sbjct: 125 IAQEIRDAIWNELHLTASAGIAPLKFLAKIVSDQNKPNGQF------VISPENMTAFIYD 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + G+G+ ++KL +G+ T D+ +D FI K F +R ++E Sbjct: 179 LPLKKIPGVGKVTNEKLAQLGLHTCGDIQHSDKAFIYKTFGKFGQRLWEFSHAIDNRKIE 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE-----HQYCRFISTFIK 293 P ++ + + I Q + + +L+ Q + ++ +K Sbjct: 239 ANRP-RKSLAVENTLPTDIWHLAEAEQIVDELFKKLVFRLQRNWGERSLQEFKKLAIKLK 297 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA--GHRYQKAGVMLGDFF 351 F L T L +WQ + G+ + Sbjct: 298 FGDFT----------QTTLERTTDGLS--RERFIELLQQVWQRTNRRSVRLIGLSVHYPT 345 Query: 352 SQGVAQLNLFD 362 + QLNL++ Sbjct: 346 EKVKKQLNLWE 356 >UniRef50_D1C5S0 DNA-directed DNA polymerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5S0_SPHTD Length = 394 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 95/382 (24%), Positives = 161/382 (42%), Gaps = 21/382 (5%) Query: 15 ETVFRPDLWGKPVVVLSNNDGCV--IARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 E + RP+L GKPV+V G A + EA+A GV+ P + L V Sbjct: 24 EILRRPELRGKPVIVGGRPGGRGVVAAASYEARAYGVRSAMPIAQAVRLCPHG--VFLPG 81 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDFGREIRATVLQRT 131 ++ Y ++S R + LE SP VE+ S+DEA+ DL+ + R I+ V + Sbjct: 82 DHAYYRELSGRFRAILERFSPLVEMVSVDEAYLDLSHSERSVGPPLEAARAIKRQVREEL 141 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 LTV +G+A ++ +AK+A+ K + L + ++ LPV+ + GIG + Sbjct: 142 GLTVSLGVATSRLVAKIASDLDKPDG------LRLIEPGAEAVTLAPLPVERMPGIGPKS 195 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 ++L +G+ T+ LA +R F + + RG + + I R Sbjct: 196 VERLQRIGVTTLGGLARMPAAALRPIFGRRADEVIARARGIDPRPVNPEREPAKSIGRER 255 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 +FG+ +TD + +A+ A R LR E R ++ ++ S F + Sbjct: 256 TFGQDLTDRHEIERALYHLAERTGRDLRREGLQGRVVAVKLRYSDFE------TVGRQRR 309 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 L PT D ++I A + + + + GV + QL +F D Sbjct: 310 LPRPTDDHQEIAEVAMDLVARLLEERQAPVRLLGVRVAGLGPA-AIQLTMFGD--DPLRR 366 Query: 371 EQLMTVMDTLNAKEGRGTLYFA 392 +L +D L A+ G + A Sbjct: 367 HRLNHALDDLAARYHAGLVIPA 388 >UniRef50_C7H0B0 Putative DNA polymerase IV n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0B0_9FIRM Length = 406 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 83/403 (20%), Positives = 169/403 (41%), Gaps = 24/403 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + CD+N+++ S E + P+L PV V N G ++A+N AK G+K G+ + Sbjct: 6 VILHCDMNSYFVSVELLKHPELKDLPVAVAGNPKNRHGIILAKNEIAKKYGIKTGETIWA 65 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL- 116 K+ + + S +Y+ Y S R+E +S+DE++ D+TG Sbjct: 66 AKNKCKDLEL--LSPHYDEYIKYHKLFNDIFYRYSDRIEKFSVDESWIDVTGSIKLFGTG 123 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + +IR V + +T+ G++ K AK+ + K + + + ++++ Sbjct: 124 KEIADKIRGEVREELGITLSAGVSFNKVFAKMGSEYKKPDA------TTVISRDNYKEVL 177 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV + + +G+ +K L++ GI T+ DLA + + ++ V + + G+ + Sbjct: 178 WPLPVSEFFMVGKITAKLLNSYGIYTIKDLAAAEPQILKAELGVKIYELIDSANGKSSDE 237 Query: 237 LEEFA--PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 ++ + I ++F E + +++ + + A++LRS + + + IK Sbjct: 238 VKYYKDNEDPMSIGHGKTFKEDLVTSTQVKKEVWGLSEMVAKRLRSHNLFAAGVKVVIKD 297 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 S F S KL PT + I A + A W + + + D Sbjct: 298 SDFK------SYSRQKKLRLPTDVTGHIAEEAFSLIKASWDFSKKLRAMSITGIDLRPDC 351 Query: 355 ---VAQLNLFDDNAPR-PGSEQLMTVMDTLNAKEGRGTLYFAG 393 +Q ++F ++ VMD + K G ++ + Sbjct: 352 KDIGSQYSIFSQGEQEGIKEREVDKVMDEIKQKFGDQSIGYGV 394 >UniRef50_A7I5X9 DNA-directed DNA polymerase n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I5X9_METB6 Length = 365 Score = 360 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 87/367 (23%), Positives = 150/367 (40%), Gaps = 21/367 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D++ FYA+ E P++ GK VVV G V + EA+A GV+ P Sbjct: 12 IVLHADMDCFYAAVEMHDHPEIAGKAVVVGADPQGGAGRGVVSTASYEARAFGVRSAMPI 71 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + L G V + YA +S +M +E RV+ SIDEAF D++ VR+ Sbjct: 72 SQAYRLCP--GAVYLRPDMARYAAVSAEIMGIFKETGYRVQQVSIDEAFLDISPVRSFDT 129 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 D ++ T+ R +T +G+A +K +AK+A+ K + + R Sbjct: 130 ARDLAVRLKQTIRDRVGITCSLGVAPSKIVAKIASGHQKPDGM------TVVTPDSARDF 183 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 ++ LP+ + GIG + +++A+GI T+ +LA DI+ + F G Sbjct: 184 LAPLPIRKIPGIGGKTGAQIEALGITTIGNLATCDIQVLVGAFGRSAGLLREAALGHDNS 243 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ E + I +F D + + A+ + E + ++ ++ + Sbjct: 244 EVVERDGV-KSISKETTFANDTEDPKEIAATMELLVREVAQAIADEALQFKTVTIRVRYA 302 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + + LL D I AA L +W G ++ G+ L Q Sbjct: 303 GF------VSKTKARSLLHYHNDEAAIRAAAGELLRELWD-GKPIRRLGLRLSTLRHQDS 355 Query: 356 AQLNLFD 362 Q LF Sbjct: 356 RQQTLFG 362 >UniRef50_Q9AK82 DNA polymerase IV n=34 Tax=Bacteria RepID=DPO4_STRCO Length = 479 Score = 360 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 98/379 (25%), Positives = 149/379 (39%), Gaps = 23/379 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E +P L GK VVV G V + EA+ GV P + + Sbjct: 7 ILHLDMDAFFASVEQASKPSLRGKAVVVGGLGPRGVVATCSYEARVFGVHSAMPMGQARR 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF- 119 L + +ELY +S +VM L ELSP VE S+DEAF DL RD Sbjct: 67 LAPHAAYLV--PRFELYRSISEQVMRLLRELSPLVEPLSLDEAFVDLDAGGAARDAETAR 124 Query: 120 --GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 G ++R + T LT VG+A +K LAK+A+ AAK + L +R ++ Sbjct: 125 LAGTKLRTDIRTVTGLTGSVGLAASKMLAKIASEAAKPDG------LVLIPPGTERAMLE 178 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQ 236 + V + G+G L GI TV ++A+ + + Sbjct: 179 PMTVRTLPGVGPATGDHLRRAGITTVGEIAEAGEDELVRLLGKAHGHALYAMALARDERP 238 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + T + + ++ I D + + A R +LR+ R I ++ Sbjct: 239 VVAERET-KSVSVEDTYDVDIHDRVRVGVEVGRLADRCVRRLRASGLSGRTIVLKVRRYD 297 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F+ + S L PT D + AA R LD++ G + GV + Sbjct: 298 FS------TLTRSETLRGPTDDPAVVREAAARLLDSVDTTG-GVRLLGVGVSGL--ADYT 348 Query: 357 QLNLFDDNAPRPGSEQLMT 375 Q +LF A E Sbjct: 349 QEDLFAQAAGDRAEEPAEE 367 >UniRef50_Q0KKM4 Putative UV protection protein n=1 Tax=Plasmid pLB1 RepID=Q0KKM4_9ZZZZ Length = 420 Score = 360 bits (925), Expect = 5e-98, Method: Composition-based stats. Identities = 162/419 (38%), Positives = 233/419 (55%), Gaps = 5/419 (1%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 DV FY S E +F P L G PV+VLSNNDGC +AR+ EAKAL V+MG+P FK +D R Sbjct: 6 VDVQNFYVSAERLFDPSLRGVPVLVLSNNDGCAVARSEEAKALHVRMGEPVFKIRDRIER 65 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIR 124 G+ SSNYELY+D++ R + + + S VEIYSIDE+F + + + ++R Sbjct: 66 HGMRLRSSNYELYSDLNRRFNAVIADHSDTVEIYSIDESFYRAPTLPSGLGDVEAAHKLR 125 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 +L++ L +G+ T+TL+K+AN AK ++ GGVVDL + E +R+L PV +V Sbjct: 126 EDILRQVGLPTRIGLGPTRTLSKVANALAKATEKVWGGVVDLHDTELRRRLFEKWPVGEV 185 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK 244 WGIG + +L +GI+T DLA R +VVLER VREL G C+ + Sbjct: 186 WGIGGALEARLRPLGIRTTADLAAMPPAVARDVGSVVLERLVRELNGIECVDFKLEPDAL 245 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 + +R FGE + +R+A+ AARAAEK+R++ + F S + N P Sbjct: 246 KNTAVTRQFGEPVKTLEELREAMARRAARAAEKIRAQGLVASRLIAFAHGSRYRPNPP-- 303 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 S S +L PT D R I+ + +A++Q G Y K GV+L D QG Q +LF Sbjct: 304 SASRSARLSPPTNDPRIILRIVGQMTEAMFQPGGVYTKCGVLLEDLTPQGHGQADLF--A 361 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI-QQQWQMKRAMLSPRYTTRSSDLLRVK 422 P + L+ MD LN++ GR T+ A QG + + KR+ SP +TTR D+ + Sbjct: 362 VADPRAPALLAAMDGLNSRFGRNTIMLAAQGHGPKAFDTKRSQKSPAWTTRIKDIPIAR 420 >UniRef50_C4GAM5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAM5_9FIRM Length = 425 Score = 360 bits (924), Expect = 6e-98, Method: Composition-based stats. Identities = 100/424 (23%), Positives = 168/424 (39%), Gaps = 30/424 (7%) Query: 1 MFALCDVNAFYASCETVFR-------PDLWGKPVVVLSN---NDGCVIARNAEAKALGVK 50 + DVN+ + S R DL P + + G + A++ AK G+ Sbjct: 5 IIFHVDVNSAFLSWTASDRMAKGIDKVDLRDLPSAIGGDPKTRHGIITAKSIPAKRYGIV 64 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + ++ +Y LYA S +M L + +P V+ +SIDEAFCD+TG Sbjct: 65 TGEPVSQALRKCPS--LILVPGDYSLYARQSQALMDLLRKYAPAVDPFSIDEAFCDMTGT 122 Query: 111 RNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + D F +++ + + TV VGI+ LAK+A+ K + V L Sbjct: 123 ASLYGDPVLFAHKLKDEIRRDLGFTVNVGISSNHLLAKMASDFTKPDR-----VHTLWPR 177 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 E RK M LP D+ +G ++KL ++GI T+ DLA T + HF + + Sbjct: 178 EIPRK-MWPLPAADLLFVGESTAQKLKSLGILTIGDLAGTPEDLLVSHFGKHGSQMLAYA 236 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G L + + + D R + S A ++R + R + Sbjct: 237 NGTEPSDLTSRHRKSRGFSNEITISHDLVDREEARLILLSLCETLAARIRLQGDKIRLVG 296 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 + K S F S +L + ++ I A L +W G + GV + Sbjct: 297 VYYKDSSF------VSASRQTRLNRSSSSTQTIYETALSLLHELWD-GRPLRLLGVRGSE 349 Query: 350 F-FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW--QMKRAM 406 G Q++LFD +QL +D + K G ++ A + + +R+ Sbjct: 350 IDKDSGSYQMDLFDAG-KNRKLDQLDAAVDQIRDKFGDSSIRRAVFLGADETDLKKRRSN 408 Query: 407 LSPR 410 S + Sbjct: 409 RSRK 412 >UniRef50_C2FXW7 Possible DNA-directed DNA polymerase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FXW7_9SPHI Length = 393 Score = 360 bits (924), Expect = 8e-98, Method: Composition-based stats. Identities = 78/403 (19%), Positives = 155/403 (38%), Gaps = 21/403 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D++ F+ S E + GKP++V ++ V A + E + GV P Sbjct: 10 VAHLDLDTFFVSVERLKNTQFVGKPLIVGGMSDRAVVSACSYETRLYGVHSAMPMKLALR 69 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + + + Y+ S V + E P +E SIDE + DLTGV + F Sbjct: 70 LCPQA--IVIRGDMDSYSYYSRMVTDVVREYVPVMEKASIDEFYADLTGVDRFFGCSQFM 127 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 E++ V + L + +A K ++K+A AK ++ ++ ++ L Sbjct: 128 AELKQKVRKEVGLPISYALASNKLISKVATEDAKPDGKRE------VEHGLEKDYLAPLR 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++ + GIG + S L MG++T+ L++ + ++ R+ G + + Sbjct: 182 IERMPGIGNKTSGLLHQMGVRTIKVLSEIPVPMMQNLLGKNGVDLSRKANGIDFTPIVPY 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + I +F + D ++ + R +LR + I+ ++ S F Sbjct: 242 SEQ-KSIGTEETFEQDTIDIYYLKSELIRMTERMTFQLRQHRRLTGCITIKLRYSNFD-- 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 S + + T +++ A ++ + GV QG Q++L Sbjct: 299 ----TVSKQMVIP-YTASDAVLLSKAKELFAKLYDKRLLVRLLGVRFSHLV-QGQYQIDL 352 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 F+D L MD + + G + A + + + Sbjct: 353 FEDTVESVR---LYQAMDYIRQRYGDAVVKRAISVPKPPEKER 392 >UniRef50_A3VP13 DNA polymerase IV n=5 Tax=Alphaproteobacteria RepID=A3VP13_9PROT Length = 422 Score = 359 bits (923), Expect = 8e-98, Method: Composition-based stats. Identities = 85/394 (21%), Positives = 150/394 (38%), Gaps = 23/394 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AF+A+ E P L KPV+V + G V A++ G+ P FK K L Sbjct: 35 IAHVDCDAFFAAIEKRDDPSLVDKPVLVGGGHRGVVSTCCYIARSYGIHSAMPMFKAKAL 94 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 + V Y + + ++ + L+P ++ SIDEA+ DL G Sbjct: 95 CPQA--VIVPPRGAAYREAAAQIRDLMAPLTPLIQPVSIDEAYLDLGGTERLHGAIPAQL 152 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++ V + +T+ +G++ K LAK+A+ K L ++ Sbjct: 153 LAKLAKDVETQIGITLSIGLSVNKLLAKIASDFDKPRG------FTLIGGTEAANFLAPY 206 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P + GIG R S+KL G +T+ DL R + + GE + Sbjct: 207 PPGLLPGIGTRFSEKLMRDGFRTLGDLQHCSTRELVDRYGEHGLTLRARACGEDPRPV-T 265 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + +F I D ++ + + A + + + + + R ++ +KT+ F Sbjct: 266 VDRETKSVSGETTFRADIGDAAALEDHLYAMARKVSSRAKEKGLAGRVVTLKLKTARFR- 324 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH---RYQKAGVMLGDFFSQGV- 355 + L + +R I + A L A Q G Y+ G + D V Sbjct: 325 -----TFTRRQTLPHASNLTRVIFDCARAMLTAELQKGRTPVTYRLIGAGISDLVPAEVM 379 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 LF + + +D LNA+ G ++ Sbjct: 380 HDGYLF--AEDLEKTGRREDAIDKLNARFGEDSI 411 >UniRef50_Q4ZWM4 DNA polymerase IV n=61 Tax=Bacteria RepID=DPO4_PSEU2 Length = 354 Score = 359 bits (923), Expect = 9e-98, Method: Composition-based stats. Identities = 76/368 (20%), Positives = 136/368 (36%), Gaps = 28/368 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D + FYA+ E PDL GKP+ V + G + N EA+A GV+ Sbjct: 6 IIHIDCDCFYAAIEMRDEPDLAGKPLAVGGSAERRGVIATCNYEARAYGVRSAMSSRHAL 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L + + Y + S + + + + +E S+DEAF D++ + T Sbjct: 66 KLCP--DLTIVKPRMDAYKEASREIHTIFRDYTDLIEPLSLDEAFLDVSEAGHFSGSATR 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++IR V + H+TV G+A K LAK+A+ K + + ++ + +++ Sbjct: 124 IAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNG------LFVITPDQVEEFVAS 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G+ + KL +GI DL + + F ER G ++ Sbjct: 178 LPVTKLHGVGKVTADKLGRLGIVDCADLRSRSKLALVREFGSFGERLWSLAHGIDDRPVQ 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE--HQYCRFISTFIKTSP 296 +Q + ++ + D + + + + ++ +K Sbjct: 238 -NDSRRQSVSVENTYDTDLPDLAACLEKLPDLLETLSGRMARMEGQYRPGKPFVKVKFHD 296 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK--AGVMLGDFFSQG 354 F L + RD+ + A + G + GV L D Sbjct: 297 FT----------QTTLEQ-SGAGRDLGSYEQLLAQAFARGGKPVRLLGIGVRLHDLR-AA 344 Query: 355 VAQLNLFD 362 QL LF Sbjct: 345 HEQLELFS 352 >UniRef50_C8WGA6 DNA-directed DNA polymerase n=3 Tax=Bacteria RepID=C8WGA6_EGGLE Length = 448 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 91/415 (21%), Positives = 153/415 (36%), Gaps = 31/415 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D+NAFYAS E RP+L G P+VV + G V+A++A+AKA GVK G+ ++ Sbjct: 29 VIFHSDMNAFYASVEQAERPELRGVPLVVGGHEELRHGIVLAKSAQAKAAGVKTGEALWE 88 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RD 115 + G+V YE+Y S + + VE + +DEA+ DLTG D Sbjct: 89 ARAKCP--GLVVVPPRYEVYQAYSAMARRIYYQYTDLVEPFGLDEAWLDLTGSLPLLGGD 146 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 EI + TV VG++ K AK + K + + R Sbjct: 147 PARTAAEISGRIKAELGCTVSVGVSWNKIFAKFGSDFRKPDA------ITFITPQNYRCR 200 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + PV ++ +G KL + GI + +LA +R+ + RGE Sbjct: 201 VWEAPVSELLYVGAATRAKLHSSGIDRIGELACASPELLRRRLGKIGLVLRAFARGEDAT 260 Query: 236 QLEEFAPTK-------QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 ++ + + + + I + + + A++LR + Sbjct: 261 PVKPYDQARNEVDRTVKSFGNGLTAPHDIVSASDAKALVYLLSESVAQRLREARFRASTV 320 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG--HRYQKAGVM 346 S ++++ S L T + + A L A H + V Sbjct: 321 SIGVRSAR-----DLASYSRQTTLRRATNVTGVVARTAWGLLAANEPLDGEHPLRGLHVR 375 Query: 347 LGDFFS-QGVAQLNL-FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + QL L FD A R E L +D L + G + + + + Sbjct: 376 ASNLEPCDAPQQLELAFD--ARRRMLEDLDETIDDLRRRFGNTCIQRGAELLDES 428 >UniRef50_C7RGQ0 DNA-directed DNA polymerase n=5 Tax=Anaerococcus RepID=C7RGQ0_ANAPD Length = 345 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 158/362 (43%), Gaps = 21/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D +AFYASCE + P + P+ V +N + N +A+ G+ P F K+ Sbjct: 4 IFHVDCDAFYASCEELRNPKMKNHPLAVGGLSNKSILTTANYKAREFGLHSAMPVFIAKE 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ +++ Y S V S ++E + +E S+DEA+ + Sbjct: 64 LCP--NLILLPVDHKYYRKKSKEVFSLVKEYAKLMEQVSVDEAYL----LVETDSPKKLA 117 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R+++ VL++T + + +GI+ K LAKLA+ K E + + Sbjct: 118 RKLQEEVLRKTGIGISIGISYNKFLAKLASDWQKPHGITQ------IRKEDLDYFLPNIS 171 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ V GIG++ S++L+ +GI V DL D ++ +F +RG ++ Sbjct: 172 VNKVHGIGKKTSERLNKIGIYKVEDLLKLDYEYLIDNFGKQGAYIYHVIRGVDDRKINPS 231 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ I R+F + D + + + + +++ ++ + ++ IK + F Sbjct: 232 R-VRKSIGKERTFAQNTNDMAILTSYLKNLSELIEDEMDIKNIQGKTVNLKIKDAKFK-- 288 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 ++ S+ L P ++DI N A L+ + + G + G+ L + + + QL+ Sbjct: 289 ----NHTRSITLQEPIYRAKDIYNEALSLLEDLHK-GEMLRLIGISLSNLQERKLNQLSF 343 Query: 361 FD 362 D Sbjct: 344 LD 345 >UniRef50_Q654Y6 Os06g0691000 protein n=7 Tax=Poaceae RepID=Q654Y6_ORYSJ Length = 1125 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 70/418 (16%), Positives = 148/418 (35%), Gaps = 38/418 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN----NDGCVIARNAEAKALGVKMGDPWFK 57 D++ F+ S +P+L KPV V + + + N A+ G+K G + Sbjct: 379 IIHIDMDCFFVSVVIRNKPELHDKPVAVCHSDNPKGTAEISSANYPARNYGIKAGMFVRE 438 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K ++ +++ Y +++++ L + +V+ S DEAF D+T + + Sbjct: 439 AKARCPH--LMIVPYDFDAYGEVADQFYGILHKYCSKVQALSCDEAFLDMTECLHD-NPE 495 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + ++IR + T + GI+ +A+LA +AK + + E+ ++ Sbjct: 496 EVTQKIRNEIFGTTKCSASAGISGNMLIARLATRSAKPNGQCF------ISSEKVDGYLN 549 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQ 236 L + + GIG +S KL + ++ L + + K F + RG Sbjct: 550 TLSIKALPGIGHTVSDKLKSKEVEYCGQLRNIPKESLHKDFGKKIGDMLWNYCRGIDHSV 609 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS- 295 +E T + + ++G R D + + + +L R I+ +KT Sbjct: 610 VEAVQET-KSVGAEVNWGVRFNDNKDAENFLVNLSKEVCLRLEGCGVQGRTITLKLKTRR 668 Query: 296 -------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 F S S+ + T + + A + + + G+ + Sbjct: 669 KGAGEPIKFMGCGDCETVSRSMTIAGATDNPVTLQRIAKQLFSSFCVDVKEVRGVGLKIS 728 Query: 349 DFFSQGVA----QLNLFD----DNAPRPGSEQLMTVMDTLNA-------KEGRGTLYF 391 +A Q N+ + + + N + G G++ Sbjct: 729 RLEHADLARGAPQGNMLESWLASPSDKLKKHSTEKACLLKNRDDAATSERRGFGSIRP 786 >UniRef50_Q0EYF1 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYF1_9PROT Length = 410 Score = 357 bits (916), Expect = 5e-97, Method: Composition-based stats. Identities = 107/393 (27%), Positives = 176/393 (44%), Gaps = 16/393 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AFYASCE P L G+P+ VLSN++ VIA++ +A+ALG++ G P ++ + + Sbjct: 10 IAHVDCDAFYASCEAARHPKLRGRPICVLSNHNAMVIAKSYDARALGIRTGTPVWEARRM 69 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDF 119 + ++ Y +S ++ S L SP VE+YSIDE F D G+R + + Sbjct: 70 APHAA--FLTPDFRYYGQISQQMFSILRRYSPVVEVYSIDEGFIDFNGIRQLWKKTYREL 127 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIR V +TV VG++ ++TLAK+A+ K V + ++ ++ L Sbjct: 128 ADEIRHAVWHELGITVSVGVSVSRTLAKMASEHHKPNG------VTVVPVQAIATFLAEL 181 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V ++ GIGR + L I+T L A D R +++ + EL G L LE Sbjct: 182 GVGEIPGIGRSRAALLCRKDIRTALQFARADERLLQRLIGRHGQMLRHELNGRAILTLEC 241 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P + + + S G + + +A R L ++ + F+ F Sbjct: 242 EPPLPKSMAKTASMGRISEKRRVIAAYLGYHALRLVADLVAKQLLVSRLYLFLTLESFEC 301 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 G L PT + I A +L ++ G RY+ GV+ + AQ + Sbjct: 302 RGLEVG------LDLPTNSLKRINGAVHHALGRLFIEGERYRGCGVVATQLQREAHAQPD 355 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 LF +QLM ++ +N + G + A Sbjct: 356 LFGLMREDLRQQQLMQAVNAINRRFGEQAISTA 388 >UniRef50_A9NFA5 DNA-damage repair protein n=5 Tax=Bacteria RepID=A9NFA5_ACHLI Length = 448 Score = 357 bits (916), Expect = 6e-97, Method: Composition-based stats. Identities = 92/416 (22%), Positives = 154/416 (37%), Gaps = 22/416 (5%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 D+ +FYAS E V R D + P+VV + G V+A + K+LGV F+ Sbjct: 37 ILCIDLKSFYASVECVLRGLDPFKTPLVVADKSRGGGSIVLAVSPYLKSLGVPSRCRIFE 96 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRD 115 L ++ + Y + S V+ + + +YSIDEAF DLT Sbjct: 97 ---LPEDLNIIYAKPQMQTYLEYSASVIGVYLDFISEADLYVYSIDEAFLDLTSYLAYYK 153 Query: 116 LTDF--GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 TD EI T+ + LT GI ++KL+ K + + + + + Sbjct: 154 KTDIELAEEILNTITSKLGLTATCGIGPNMIMSKLSMDIEAK--KNPNNIAKWNYDDIKD 211 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 L P+ +WGIG R+ L+ +G+ T+ D+A+ +++ F V+ E G Sbjct: 212 HLWPVTPLSKMWGIGHRMESHLNKLGLFTIGDIANYPKEKLKRRFGVLGEELWYHTHGID 271 Query: 234 CLQLEEF---APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 ++++ + + + I +LR + + IS Sbjct: 272 LSEIKDKYKLRTKPKSFGSGQVLFRD-YSETEIMTIILEMVDDVTRRLRIAKKRAQTISL 330 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 I G S V L PT I D ++ G+ + GV L Sbjct: 331 SIGY----TKSVAGGFSRQVTLEQPTSSEATIYQTCQDLFD-MYYEGYPIRTVGVHLSKL 385 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 V Q +LF+D QL MD + K G+ ++ + +R Sbjct: 386 TDSKVYQYSLFEDAHQLEKEYQLHMTMDKIKHKFGKNSVIRLSSEQEHATAKQRNK 441 >UniRef50_Q2LU75 DNA polymerase IV n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LU75_SYNAS Length = 362 Score = 357 bits (916), Expect = 7e-97, Method: Composition-based stats. Identities = 74/356 (20%), Positives = 137/356 (38%), Gaps = 22/356 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS----NNDGCVIARNAEAKALGVKMGDPWFK 57 D++AF+AS E +P+L GKPVV+ + G V N EA+ G+ P Sbjct: 16 ILHIDMDAFFASVEENRKPELKGKPVVIGGMGDPSKRGVVSTANYEARKYGISSAMPLRT 75 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 L R + +Y+ Y +S + L ++ +E IDEA+ D++ R+ Sbjct: 76 AYKLCPRA--IFLPVDYKAYLAVSRYFKAVLLNITTIMEDVGIDEAYLDISENRDTD--E 131 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +I+ + ++T LT +GIA K LAK+A+ K + + + E + Sbjct: 132 KISEKIKTGIYEKTGLTCSIGIAPNKLLAKIASDMNKPDG------LTIFSGEDIENRLW 185 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQ 236 LP+ ++GIG + + L A+ I T+ LA + F RG Sbjct: 186 PLPIRKLYGIGPKTEEHLKALNIATIGQLAALPPEVLVARFGPSYGHYLHEASRGIDESP 245 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + +F ++ ++ + + L + R + I+ S Sbjct: 246 IIT-SWEPKSFSREITFQVDEKNWQAIARTLAELTKEVVSDLAEKGYAARNVILKIRYSD 304 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 F + + + +I A L + +G + + GV +G Sbjct: 305 FR------TVTRACSIDQAVGKEEEIRRMAFSCLKRVDLSGKKIRLVGVRVGRLEK 354 >UniRef50_B1KD33 DNA polymerase IV n=55 Tax=Proteobacteria RepID=DPO4_SHEWM Length = 364 Score = 356 bits (914), Expect = 1e-96, Method: Composition-based stats. Identities = 66/376 (17%), Positives = 135/376 (35%), Gaps = 38/376 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ ++A+ E P+L GKP+ V + G + N EA+A GV+ Sbjct: 8 IIHIDMDCYFAAVEMRDFPELRGKPIAVGGRSDRRGVISTCNYEARAFGVRSAMASGYAL 67 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L ++ +Y ++S ++ + +E S+DEA+ D+T + C T Sbjct: 68 KLCP--DLILVPGRMSVYKEVSAQIRDIFARYTDLIEPLSLDEAYLDVTECKQCQGSATL 125 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + IR + + T LT GIA K LAK+A+ K + + + ++ Sbjct: 126 IAQAIRQEIFEVTGLTASAGIAPVKFLAKVASDLNKPNGQY------VITPDMISSFITT 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + G+G+ KKL+ +G+ T +L + + F + + +G + Sbjct: 180 LPLTKIPGVGKVTGKKLEDIGLTTCGELQAYPKSELIERFGKFGKILIERAQGIDERAIS 239 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS--EHQYCRFISTFIKTSP 296 ++ + + + I + ++ + + +K + Sbjct: 240 PHR-ERKSVGVETTLAKDIYTLEQCHGVMPQLIQELGARMSRSAKGRSINKQVVKLKFND 298 Query: 297 FALNEPYYGNSASVKLLTPTQ--DSRDIINAATRSLDAIWQAGHRYQKAGVML------- 347 F + + + +SL+ Q G + GV + Sbjct: 299 F----------KQTTIEHRSDEMSVKLFYELLAQSLER--QQGRGIRLLGVSVGLACQAD 346 Query: 348 GDFFSQGVA---QLNL 360 + QL+L Sbjct: 347 SNTAKDNQVRESQLDL 362 >UniRef50_Q6MCK0 Putative SOS mutagenesis and repair protein UmuC n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCK0_PARUW Length = 393 Score = 355 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 148/395 (37%), Positives = 220/395 (55%), Gaps = 5/395 (1%) Query: 27 VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 +VVLSNNDGCVI+R+ EAK LGVKMG+P+F+ K L + FSSNY LY D+S R+M+ Sbjct: 1 MVVLSNNDGCVISRSQEAKLLGVKMGEPYFQIKALCEFRNIQVFSSNYALYGDISERIMN 60 Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 L E +P ++IYSIDEAF DL E++ V + + + +G+A TKTLA Sbjct: 61 LLFEHAPDLDIYSIDEAFLKYPSSVAPSDLVSLCHELQKKVKKWVGMPISLGLANTKTLA 120 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 K+AN AKK Q V DL N ++K++ + DVWGIGR + +KL+ M I T + Sbjct: 121 KMANDLAKKIQNFY--VFDL-NSSVRQKVLQNYLIGDVWGIGRNLKEKLNGMNIHTAWEY 177 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 A D IRK V+ ER + ELRG CL+ +E K+ ++ SRSFG +++ + +A Sbjct: 178 AQMDPSIIRKRLGVIGERILWELRGVSCLESDEKVS-KKSLLYSRSFGHVLSEITPLSEA 236 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + +Y AEKLR++ + + F++ + +S + PT+D+ ++I AA Sbjct: 237 LSTYVYTVAEKLRAQGSLAKALYIFLEYQIQPGKKMRCYDSITEIFPAPTKDTGEMIKAA 296 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 R L+ I++ RY+K GV+L D + + +LF N P QLM MD LNA+ G+ Sbjct: 297 KRGLNKIFRREERYKKCGVILLDLLPESSSNSDLF-LNPVDPKRTQLMNTMDALNARFGK 355 Query: 387 GTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 L+F G W+ ++ S + L V Sbjct: 356 KKLFFGAMGTDVSWKSRKDCSSKHNPSNWQQLPIV 390 >UniRef50_B9HS71 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HS71_POPTR Length = 1191 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 69/367 (18%), Positives = 130/367 (35%), Gaps = 23/367 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN----NDGCVIARNAEAKALGVKMGDPWFK 57 D++ F+ S P+L KPV V + + + N A+ GVK G Sbjct: 441 IIHVDMDCFFVSVVIRNHPELHDKPVAVCHSDNPKGTAEISSANYPARNYGVKAGIFVRD 500 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K L + +V F N++ Y ++++++ + L + +V+ S DEAF D+T ++ D Sbjct: 501 AKALCPQ--LVIFPYNFKAYEEVADQLYNILHKHCHKVQAISCDEAFLDITE-KDMGDPE 557 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 IR + T T GIA +A+LA +AK + + + Sbjct: 558 LLASTIRKEIFDTTGCTASAGIAGNMLMARLATRSAKPNGQCY------IPSVSVDEYLH 611 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 LP+ + GIG + +KL + T L ++K F E RG Sbjct: 612 KLPIKALPGIGHVLEEKLKKQNVWTCGQLRLISKESLQKDFGLKTGEMLWNYSRGVDNRL 671 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT-- 294 + + I ++G R D + + + + +L+ R + IK Sbjct: 672 VGNIQ-ESKTIGAEVNWGVRFKDLQDSQCFLLNLCKEVSFRLQGCRVQGRTFTLKIKKRR 730 Query: 295 ------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + + S S+ + D + + + + G+ + Sbjct: 731 KDAGEPAKYMGCGDCENLSHSMTVPIAIDDVEALQRITKQLFGSFCLDVKDIRGVGLQVS 790 Query: 349 DFFSQGV 355 + Sbjct: 791 KLENADP 797 >UniRef50_Q38YP4 DNA-damage-inducible protein P n=30 Tax=Bacilli RepID=Q38YP4_LACSS Length = 376 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 80/365 (21%), Positives = 153/365 (41%), Gaps = 19/365 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYAS E +PDL KP+++ + G V N A+ GV Sbjct: 17 IIHIDMDAFYASIEEREQPDLRQKPLIIARDPSDTGGKGVVTTANYVARQYGVHSAMSAQ 76 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRD 115 K +L + V + N+ LY +S ++ ++ ++E + DEA+ D+T Sbjct: 77 KAAELIPKHQAVFKTPNFPLYQSVSAQIHDIFHTVTDKIEPIAFDEAYLDVTENKLGLTH 136 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + ++ +L+ T L GI+ K LAK+A+ K R L E+ Sbjct: 137 TIEVVAYLQKAILEETQLVSSAGISYNKFLAKMASDYRKPAGR------TLVLPEQAIAF 190 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 +S LP++ G+G++ K+ +GI T DL F+ +HF + R +RG Sbjct: 191 LSRLPIEKFRGVGQKTVPKMQDLGIMTGADLLAQSEMFLMQHFGKLGYGLYRHVRGIDNR 250 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + E+ ++ I ++G+ + ++ + S A A++LR ++ + ++ Sbjct: 251 PV-EYQRERKSIGNEHTYGQPLISEEQVQVQLKSLAVELAQRLRKNQKHGLTVVLKVR-- 307 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 N Y + L ++ ++ A + +I QA + G+ + + Q Sbjct: 308 ----NRQYETITKRKTLGEYVGNAAELEAIANQIWQSIGQAEVGIRLLGITVTNLAPQTF 363 Query: 356 AQLNL 360 + L Sbjct: 364 ENITL 368 >UniRef50_A1A051 DNA-damage-inducible protein P n=10 Tax=Bifidobacterium RepID=A1A051_BIFAA Length = 471 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 90/424 (21%), Positives = 157/424 (37%), Gaps = 48/424 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E P+ KPV++ N V A N EA+ G+ + + L Sbjct: 51 VLHIDMDAFFASLEVARHPEYADKPVIIGIGNRSVVSAANYEARKYGINSAMASSRARKL 110 Query: 62 FRRCGVVCFSSNYELYADMSNRVM-STLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDF 119 V + Y +MS R+ ++ R+E S+DE + D++G + + Sbjct: 111 CP--NGVFLPVDIHYYREMSRRIFTEVFSRVTDRIEQVSVDECYMDVSGALLRWKSPRAI 168 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G IR V +R H+T VGIA K +AK+A+ AK + + R + + + Sbjct: 169 GAWIRDQVARRYHITCSVGIAANKLVAKMASTNAKPDGM------LMIPVARHAEFVQMM 222 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN--VVLERTVRELRGEPCLQL 237 P+ + GIG + K+L+A G+ +V DLA + + + + RG + Sbjct: 223 PLRGIPGIGPSLEKRLNAWGVDSVADLAKMSMESLEQATGSAISARGLYMAARGLDDRPV 282 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + R+F + D + + A LR R + ++ Sbjct: 283 AP-RAQGKSVGAERTFDKDTQDMRQVTSMLRWCCDDVAGTLRRRGLMARKVMVKLRFPDL 341 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG----------HRYQKAGVML 347 + + L PT + + L A+ + AG+ Sbjct: 342 S------YATKGHTLDCPTDAASMLYPQCVALLLAMMGMPESSIDAISLTRPVRLAGMSA 395 Query: 348 GDFFS--QGVAQLNLFD--------------DNAPRPGSEQL---MTVMDTLNAKEGRGT 388 G QL+L D D P SE+L +D + K G+G+ Sbjct: 396 GGLVEAADAAVQLSLDDMLEEQNEAQRGRGTDTEPSTQSERLRGAEAALDAVRLKYGKGS 455 Query: 389 LYFA 392 + Sbjct: 456 VRLG 459 >UniRef50_C8NZM9 DNA polymerase IV n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZM9_ERYRH Length = 392 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 88/386 (22%), Positives = 165/386 (42%), Gaps = 20/386 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-CVIARNAEAKALGVKMGDPWFKQK 59 + D+NAFYAS + L+GKPVVV SN G V + EA++ GV P K Sbjct: 4 VIFHIDINAFYASAHLITDSSLYGKPVVVCSNQRGSVVTTASYEARSFGVNSAMPLAHAK 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTD 118 L V+ +++LY ++S + M+ + S ++ SIDE + D+T ++ D Sbjct: 64 RLCPNLEVIEV--DFDLYQELSVKFMNIIRSYSAVMQPASIDECYVDMTEVIKKYEKPLD 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EI+ + + L + +G+A K LAK+A+ K + + + + + Sbjct: 122 LAVEIQKNIWEALRLPISIGVAPNKFLAKMASDMQKPRG------ITVLRIREVSQKLWP 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L ++ ++GIG++ KL +GI+T+ DLA + ++ V + V++ G ++ Sbjct: 176 LSIESMYGIGQKTVPKLKQIGIETIGDLARFNPDHLKSILGVNAQNFVQKANGYDHSVID 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I S++F + +TD +R AI + ++ + + +S I+ + Sbjct: 236 TDVTM-KSIGQSKTFKDAMTDLDEIRNAILNELVEVKRRMERQDVVGKTVSFSIRLDDYK 294 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV--A 356 + S T+D + D G V + + + Sbjct: 295 ------TATRSFTFDEYTRDQNLVFERLMSLYDEFEGEG-GVSFISVTMTNLLPKDEIIE 347 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNA 382 QLN+FDD ++ + + LN Sbjct: 348 QLNIFDDLDEITVNDIIQRLNKELNQ 373 >UniRef50_A8YTI5 DNA-damage-inducible protein n=29 Tax=Lactobacillus RepID=A8YTI5_LACH4 Length = 406 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 75/369 (20%), Positives = 144/369 (39%), Gaps = 20/369 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-----NNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYAS ET P+L K +V+ G V N A+ GV P Sbjct: 49 IIHLDMDAFYASVETQRNPELKNKALVIGQDPRNNGGHGVVATCNYVARKYGVHSAMPAI 108 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD- 115 K L + +V +++ Y +S ++ S + E++ +VE ++DEA+ D+T + ++ Sbjct: 109 KAVKLIPKSELVFVRPDFKKYRSVSAKIHSFMHEITDKVESIALDEAYLDVTHNKLGQNL 168 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 ++ + L G++ K LAK+ + AK + R + ++ Sbjct: 169 AVQVAIGLQRRIRTELGLNSSFGVSYNKFLAKMGSEYAKPFGR------TVILPYEAKQF 222 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + ++ G+G + ++L MGI T DL + K F + + G Sbjct: 223 LGMQKIEKFPGVGPKTQEQLHEMGIYTGADLQKVADFVLIKKFKKMGYFLAQHAHGIDLR 282 Query: 236 QLE-EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + ++ I R++ I I Y ++L+ + + + + ++ Sbjct: 283 PVIADSDTNRKSIGMERTYEPAIYTRDEALTHIRHYCKHLEDELKKRNFFAQTVVIKVRD 342 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQ 353 + F + KL P+ D ++A D + GV + DF Sbjct: 343 NDFD------TVTKRRKLTKPSNSQYDYYDSARELFDKTSNFLEKGIRLIGVTVTDFKKD 396 Query: 354 GVAQLNLFD 362 +NLFD Sbjct: 397 EYQTINLFD 405 >UniRef50_A5G2F2 DNA-directed DNA polymerase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G2F2_ACICJ Length = 411 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 104/395 (26%), Positives = 157/395 (39%), Gaps = 23/395 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AFYAS E RP+L KPV+V G V A A+ GV+ P FK + L Sbjct: 37 IAHVDCDAFYASVEKRDRPELTDKPVIVGGGTRGVVAACCYIARLSGVRSAMPMFKARKL 96 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG- 120 V + YA + + + + L+P V+ SIDEA DL+G Sbjct: 97 CPDA--VVIAPEMRKYAAAAAEIRALMATLTPLVQPLSIDEAALDLSGTAALHRAPPAVV 154 Query: 121 -REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 V +TV +G+A + LAKLA K G +++ Sbjct: 155 LSRFARQVEAEVGVTVSIGLAANRLLAKLAAERDKPRGFAVLG-------AEAAAVLAPE 207 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + G+G +++KL MGI V LA + R R RG ++ Sbjct: 208 PVGILPGVGPALARKLAGMGITRVGQLAALNDRAARARLGEDGPMLAARARGIDPRPIDP 267 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 T + I +F E I D S+ + + + A +LR+E + +KT+ F Sbjct: 268 ARAT-KSISAETTFAEDIDDAASLARVLFPLCEKLARRLRAEGFAAAGLVLKLKTARFE- 325 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-QGVAQL 358 ++ +V+L PTQ + I AA L + AG RY+ G+ + Sbjct: 326 -----THTHAVRLTAPTQLAETIFEAAKPVL--MRAAGPRYRLIGIGAARLTDAAEADRG 378 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 +L D P ++ L AK G G + G Sbjct: 379 DLVDQET--PRRAAREDAVERLRAKFGTGIIRRGG 411 >UniRef50_C9M6E1 UmuC protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6E1_9BACT Length = 429 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 136/408 (33%), Positives = 210/408 (51%), Gaps = 7/408 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + LCD + F+ SCE VFRP+L G+PVVVLS+NDGCVI+R+ EAK LG+ M P+FK Sbjct: 7 LIGLCDGDNFFVSCERVFRPELNGRPVVVLSSNDGCVISRSNEAKRLGIPMCAPFFKIAP 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L RR G+ S N E+Y +MS+R+M+ + + S +VE YS+DEAF +L+ + + D Sbjct: 67 LVRRHGMTALSGNMEMYREMSDRMMAVIAQFSDQVEQYSVDEAFFNLS-IASLTDPAAHC 125 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +R T+ +R L V +G A +KTLAK A+ K ++ G V L E ++++P Sbjct: 126 LALRRTIARRIGLPVSIGAAPSKTLAKAASEMTK--GKEPG--VRLIRPEETACAVASMP 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ VWGIG+R ++K+ + GI+ V L +++ HF++ + ELRG L Sbjct: 182 VERVWGIGKRTARKMLSFGIRLVPQLTARPNGWLKGHFSIREVQIADELRGLKRFPLSSQ 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 T Q I +R+ + + + + +LR H + FI+TS F+ Sbjct: 242 EETPQSIQVTRTSAGPLRTEDELWDGLIRHILGGTARLRRHHLAAGRMELFIRTSYFSSQ 301 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + + AS PT D + A + L ++Q G Y+ +GV D QL Sbjct: 302 SRFASSRAS--FSPPTDDDLACLRAGRQILSRVFQPGWNYRASGVRFSDLSPSQPRQLTF 359 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 D +LM +D LNA G GT+ A + + + +M S Sbjct: 360 ADQLPGTRKRHRLMEAVDALNADLGAGTVLPAALLSKNRSAAQHSMTS 407 >UniRef50_C5NXH9 DNA polymerase IV 1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH9_9BACL Length = 402 Score = 354 bits (909), Expect = 3e-96, Method: Composition-based stats. Identities = 80/375 (21%), Positives = 155/375 (41%), Gaps = 23/375 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + A D+N FYAS E + P+L GKP+ + G ++ N EA+ LG+K Sbjct: 4 VIAHIDMNCFYASVEEKYNPELKGKPLAIAGEVKTRHGIIVTSNYEARELGIKTTMRVGD 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 + ++ + + Y S + + E + ++EI S+DEA+ DL+ + Sbjct: 64 ARKIYP--NIKILRPDMPKYQQESKLIFDLVREYTDKIEIVSVDEAYIDLSDFS---EPI 118 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 I+ + ++ + VG++ K AK+ ++ K + N + + ++ Sbjct: 119 KVIATIQRRIYKQLGMPSSVGVSFNKFFAKMGSNLKKPLG------FSIINKKNYKDILW 172 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L + ++ G G +KKL +GI T+ D+A + + V R + GE +L Sbjct: 173 NLDIGEMHGCGNASTKKLKKIGINTIGDIAVANEVILHSLLGVQGLRLKNKANGEGNSEL 232 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + ++ I S++F + D + + I + + + +++S IS ++ S F Sbjct: 233 KYTV-DRKSIGNSKTFTNDLIDEDDILKEIKKLSEKVSSRVKSRSYVGNNISIMVRFSDF 291 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV-- 355 + S K+ D+ DI N A L + + GV L + Sbjct: 292 K------TITRSKKIPEFICDTNDIFNYAWELLLEHYDFTKGIRLLGVSLNEIKKVKGLK 345 Query: 356 AQLNLFDDNAPRPGS 370 QL++FD + Sbjct: 346 VQLDIFDKKDYKEEE 360 >UniRef50_A8UAY3 ImpB/MucB/SamB family protein n=5 Tax=Bacilli RepID=A8UAY3_9LACT Length = 432 Score = 353 bits (908), Expect = 6e-96, Method: Composition-based stats. Identities = 86/417 (20%), Positives = 172/417 (41%), Gaps = 20/417 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN----DGCVIARNAEAKA-LGVKMGDPWF 56 DV +FYAS E V R K ++V+ +N G V+A + AK LG++ + Sbjct: 13 IFCIDVKSFYASVECVERGLHPLKALLVVMSNADKPGGIVLAASPMAKKVLGIRNVTRKW 72 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCR 114 + +V Y + + + + IYSIDE+F + G Sbjct: 73 EIPY---HPDLVIVPPRMSYYIKKNTEINDIFRKYVSDEDLHIYSIDESFISVRGSLKLF 129 Query: 115 ---DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + R I+ + ++T L V +GI +AKLA K+ + + + + Sbjct: 130 KKKSAYELARMIQYHIFKKTGLYVTIGIGDNMLMAKLALDNGAKYNSEL--IAEWRYEDV 187 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + + D+WGIG R ++L+++GIKTV DLA + +R ++ E+ G Sbjct: 188 PKTVWKIENMTDMWGIGSRTERRLNSLGIKTVYDLAHANFYQLRDSMGLIGEQLYANAWG 247 Query: 232 EPCLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + + P ++ S+ + ++ I A + A ++R H +S Sbjct: 248 IDRSDIRDSYRPLEKSYGNSQILKKDYFKRQEIKIVIREMAEQVATRIRKHHCQTGCVSL 307 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 + S + G S +K+ + T +++ ++ + ++ ++ G+ Sbjct: 308 SVSYSKYEEK---DGFSRQLKIPS-TSNTKKLVEYCFEIFNKYYEDDKSVRRIGITYSKL 363 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QL+LF++ + +E+L ++D + K G +L A + + R+ L Sbjct: 364 SYTSDIQLDLFENPTEQITNEKLDLLVDKIRDKYGFQSLVHASSLMDGATAINRSSL 420 >UniRef50_D1BPW6 UMUC domain protein DNA-repair protein n=2 Tax=Veillonella RepID=D1BPW6_VEIPT Length = 500 Score = 353 bits (907), Expect = 7e-96, Method: Composition-based stats. Identities = 92/464 (19%), Positives = 172/464 (37%), Gaps = 76/464 (16%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E + P+ G PV+V ++ G V + EA+ GV P + K L Sbjct: 1 MHVDMDAFFASIEQLDHPEYKGHPVIVGGLSSRGVVATCSYEARKFGVHSAMPILRAKKL 60 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFG 120 + + Y ++SN++ S ++E +P +E SIDEAF +++G+ G Sbjct: 61 CPDG--IYVYPRMDRYKEVSNQIFSIMKEFTPYIEPLSIDEAFLEVSGMSTMYSGPKALG 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + I+ V ++T L + G+A K LAKLA+ K + + R++++++ LP Sbjct: 119 QAIKDRVFEKTGLIISAGLAPNKFLAKLASDLDKPDG------LVVIPYGREKEVLAPLP 172 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTD-IRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + +WG+G R K L A G + + + +R G +E Sbjct: 173 IKRIWGVGPRTEKILKAGGFHLIGHIQSLPDESTLIPLVGNQAKRIWELANGIDDRPVET 232 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 Q I ++ E +T+ ++ +A R +++LR Y +S ++ F Sbjct: 233 DRKI-QSIGAEETYEEDLTEGRAIELEFRYFANRLSKRLRRRSLYGHTVSIKVRYDDFT- 290 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA---------GHRYQKAG------ 344 S +L TP+ A + + Q + G Sbjct: 291 -----TVSRQKRLDTPSDHEHVFFETALLLWNKLLQDKTSKNPKGTKKDVEALGATMKVK 345 Query: 345 -----------------------------------VMLGDFF-----SQGVAQLNLFDDN 364 + L + Q +LF+ Sbjct: 346 STDFRYSSSKDNRSNHIGSKYSSSSEIAFMDPPGPIRLLGLTVSGLDEEVPMQDSLFESP 405 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAG--QGIQQQWQMKRAM 406 + ++L +V+D+L +K G + Q ++R Sbjct: 406 QDKT-EDKLSSVLDSLESKFGETAVMSGALWQRFHGDNGIRRKR 448 >UniRef50_Q0FEJ5 DNA polymerase IV n=3 Tax=Rhodobacterales RepID=Q0FEJ5_9RHOB Length = 391 Score = 353 bits (906), Expect = 9e-96, Method: Composition-based stats. Identities = 81/396 (20%), Positives = 144/396 (36%), Gaps = 20/396 (5%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 A D +AFYAS E P KP+++ G V A+ GVK P FK L Sbjct: 12 AHIDCDAFYASVEKRDNPKFKDKPLIIGGGQRGVVSTACYIARIKGVKSAMPMFKALKLC 71 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFG 120 + + + YA S + + ELSP +E S+DEAF DL G Sbjct: 72 PEA--IVIAPRMDAYAKASKEINEMMSELSPSIEPLSLDEAFIDLRGTEKLHGEPPALSM 129 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + ++ ++ VG++ K LAKLA+ K G + + ++ Sbjct: 130 ARLVQRIEKQLKISASVGLSYNKYLAKLASDLDKPRGFSIIGKY------KIEEFLAPKS 183 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + +WG+G+ +L+ GI+ DL + + + + + RG + Sbjct: 184 IGLIWGVGKVAQMRLEQDGIRIFADLQRRSHQELIDKYQNMGDHLWHLCRGIDNRNVIA- 242 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I +F I + + I + + +++ +S++ I+ Sbjct: 243 KNVIKSISKETTFSSDINNIEKLDGYIWRLSEQVSQRAKSKNLLGHVITLK------IKT 296 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-QLN 359 + + S PTQ + I A R LD + G ++ GV + + QLN Sbjct: 297 KKFKTISRRKTQREPTQIAEKIYAEARRMLDEVASEG-PFRLIGVGISNLIDADKIDQLN 355 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 F D + + G+ + Sbjct: 356 DF-LKTDEAKKADAERATDLIKKRFGKNAILKGRSL 390 >UniRef50_C4FTM8 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FTM8_9FIRM Length = 381 Score = 353 bits (906), Expect = 9e-96, Method: Composition-based stats. Identities = 70/367 (19%), Positives = 151/367 (41%), Gaps = 23/367 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYA+ E P + KP+V+ + G V N +A+ G+ Sbjct: 27 ILHVDMDAFYANVEARDNPAIAYKPIVIAKHPKLTGGRGIVSTCNYKAREYGIHSAMTAA 86 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRD 115 + V + ++ Y ++S ++ + + + +E S+DEA+ D+T + Sbjct: 87 EAFKRCPHA--VFIAGDWSHYQEVSQQIRTIFAQYTDLIEPMSLDEAYLDVTHNKLGIQS 144 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 T + I+A + +LT +G++ K LAK+A+ K + + + ++ + Sbjct: 145 ATHLAQRIQAQIKAELNLTCSIGVSYNKFLAKIASDYRKPFG------ITVVTPDQALEF 198 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + LP+D +G+GR+ GI T DL ++ + +HF + + ++RG Sbjct: 199 LDDLPIDKFYGVGRQSVPYFHQRGIMTGADLRAIELEDLIEHFGKMGKSLYYKVRGVHDA 258 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ ++ I +F + + + + A+ R E L++++ + + ++ I+ Sbjct: 259 PVQPHR-ERKSIGKETTFIQFLAEEEGVLDALTQLTKRVVEILKAKNFHAQTVTLKIRYD 317 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF--SQ 353 F + + L +P+QD I A + + GV + Sbjct: 318 DFE------TLTRQLSLGSPSQDVEVISQAVQELWELHGHLHKSVRLLGVSTAGLIQLDK 371 Query: 354 GVAQLNL 360 QL+ Sbjct: 372 VHTQLSF 378 >UniRef50_B7S1R7 ImpB/MucB/SamB family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1R7_9GAMM Length = 359 Score = 353 bits (906), Expect = 1e-95, Method: Composition-based stats. Identities = 79/371 (21%), Positives = 137/371 (36%), Gaps = 26/371 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D ++FYAS E P L +PV V + G + N EA+ GV+ P + Sbjct: 6 IIHVDADSFYASVEMREDPSLAARPVAVGGSAQRRGVIATCNYEARKFGVRSAMPSSRAL 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L G++ S+ ++LY ++S + ++ + ++E S+DEA+ D++ T Sbjct: 66 QLCP--GLIILSARFDLYREVSQQFHQIFKDYTDKIEPLSLDEAYLDVSDCEQFHGSATL 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++IR + Q +LTV G+A K LAK+ + K E + + Sbjct: 124 IAQDIRRRIKQELNLTVSAGVAPNKFLAKVGSDWDKPDG------CFTITPEDVAEFVVD 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G + KL+ +G T +L + + K F R + G ++ Sbjct: 178 LPVSRINGVGAVTAAKLEKLGATTCGELQSIPLEVLVKRFGKYGSRLAKVAHGLDDRDVQ 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS--EHQYCRFISTFIKTSP 296 ++ I ++ I M QA+ + E +K Sbjct: 238 TSRT-RKSISVENTYHSDIEQLQQMDQALTRLLDELEGRFHKIEERYRPHKRFVKVKFDN 296 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAAT-RSLDAIWQAG-HRYQKA--GVMLGDFFS 352 F + P + A L + WQ G + G+ L Sbjct: 297 FEQTTIEE--------IIPDSGEHWLNEKAYHALLHSAWQRGSRPVRLLGAGLRLEPLHK 348 Query: 353 QGVAQLNLFDD 363 + QL LF Sbjct: 349 EMEMQLVLFSQ 359 >UniRef50_Q2RNH1 DNA-directed DNA polymerase n=5 Tax=Alphaproteobacteria RepID=Q2RNH1_RHORT Length = 421 Score = 352 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 142/372 (38%), Gaps = 20/372 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D +AFYAS E P L +P++V G A+ G + P FK + Sbjct: 38 IAHIDCDAFYASVEKRDNPSLRDRPLIVGHPGGRGVATTACYIARRFGARSAMPMFKCLE 97 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L V + Y +S +V + + E + R+E S+DEA+ DL+ G Sbjct: 98 LCPEA--VVIPPDMAKYKAVSAQVRAIMLEATHRLEPLSLDEAYLDLSEGEHRFARPPAV 155 Query: 120 G-REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I V + +TV +G++ + LAKLA+ K + + L++ Sbjct: 156 SLATIARRVEREIGITVSIGLSSNRFLAKLASDMNKPQG------FTVIDEAEAPALLAP 209 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 +PV + G+G ++L +G+ T+ DL + F + G + Sbjct: 210 MPVKRLHGVGAATERRLAELGLHTIGDLQGRPEADLLARFGKIGRALHAHAWGRGGRTIS 269 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 T + I +F ++ P + +A+ + R A L + +KT F Sbjct: 270 PDRET-KSISAETTFERDLSRLPDLARALGPLSERVARALTRNALAGATVVLKLKTHDFR 328 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-QGVAQ 357 + + +L PT + I AA R L+ G R++ GV + D Sbjct: 329 I------LTRHARLGDPTARAEVIAGAARRLLERETD-GRRFRLIGVGMADLRPGSEADP 381 Query: 358 LNLFDDNAPRPG 369 +LF + P Sbjct: 382 PDLFARSPPTAR 393 >UniRef50_Q5WYY8 DNA polymerase IV n=64 Tax=Bacteria RepID=DPO4_LEGPL Length = 355 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 80/369 (21%), Positives = 145/369 (39%), Gaps = 29/369 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FYA+ E P+L KP+ V + + G + N A+ G++ P Sbjct: 7 IIHIDMDCFYAAIEMRDFPELANKPIAVGGDAKHRGVIATCNYAARQFGIRSAMPTAHAL 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L R ++ ++Y S + S L E + +E S+DEA+ D+T C T Sbjct: 67 KLCRE--LILRPVRMDVYQKESQYIRSLLTEYTDLIEPLSLDEAYLDVTESTQCQGSATW 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EIRA + Q LT GIA K+LAK+A+ K + + E + Sbjct: 125 IAEEIRARIYQTRQLTASAGIAPNKSLAKIASDWHKPNGQ------MVIRPEDVSAFVLD 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV ++G+G ++ +KL A+ IKT DL I ++ + F + +R RG + Sbjct: 179 LPVRKLFGVGPKMEEKLGALNIKTCADLQRYSIEYLLQKFGTMGQRLYELARGIDNRPVN 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC--RFISTFIKTSP 296 ++ I ++ + + + + + AR +++ + + +K + Sbjct: 239 PER-IRKSISVEETYPKDLPNSEACLAVLPDLMARLEARIQRAGKISGIHNLFVKLKFND 297 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV- 355 F + D D+I + + G + G+ + + Sbjct: 298 F-----------QQTTIERVMDKIDLIVLRQLIQEGFARRGMPVRLLGIGI-KLKQENTY 345 Query: 356 --AQLNLFD 362 QL L D Sbjct: 346 QSVQLPLLD 354 >UniRef50_B7GNF3 Transcriptional regulator, Fis family n=9 Tax=Bifidobacteriaceae RepID=B7GNF3_BIFLI Length = 448 Score = 351 bits (902), Expect = 3e-95, Method: Composition-based stats. Identities = 88/417 (21%), Positives = 149/417 (35%), Gaps = 40/417 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E P L GKPV++ + V A + EA+ G+ P + L Sbjct: 47 VLHIDMDAFYASLEVARNPGLKGKPVIIGTGPRAVVSAASYEARRYGINSAMPAARAHQL 106 Query: 62 FRRCGVVCFSSNYELYADMSNRVM-STLEELSPRVEIYSIDEAFCDL-TGVRNCRDLTDF 119 V + Y MS+R+M ++ R E S+DE + D+ T + + Sbjct: 107 CP--NGVFLPVDMAYYRMMSHRIMHEVFLTVTDRFEQVSVDEGYMDVSTALLEWGRPSAI 164 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G IRA V +R H+T VGIA K +AK+A+ AK L R + + + Sbjct: 165 GAWIRAQVAERFHVTCSVGIACNKLVAKMASTNAKPDGM------LLIPAARSAEFVQMM 218 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN--VVLERTVRELRGEPCLQL 237 P+ + GIG + K+L+A G+ +V +LA D + + G ++ Sbjct: 219 PLRGIPGIGPSLEKRLNAWGVHSVAELAQLDETALTRATGSPAAARGLWAASHGLDSRKI 278 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + I + E D + + S A LR + R ++ ++ + Sbjct: 279 TTVREE-KSIGSEETLAEDTRDMRVVCGLLRSACDEVASTLRRKGLVARTLTVKLRFADL 337 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW----------QAGHRYQKAGVML 347 + + S + PT + + R L + + AG+ Sbjct: 338 S------YQTRSFTMERPTDTAGVLYPECVRQLKVMLGLPASAESATPLPKTIRLAGMST 391 Query: 348 GDFFS--QGVAQLNLFDDNAP---------RPGSEQLMTVMDTLNAKEGRGTLYFAG 393 Q +L D + +D + K G F Sbjct: 392 SSLSEAAATAVQPSLDDMLEEAANARGQTSQARLHDAEAALDAVRRKFGSKAAQFGA 448 >UniRef50_D2R9L6 ImpB/MucB/SamB family protein n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2R9L6_GARVA Length = 409 Score = 351 bits (901), Expect = 4e-95, Method: Composition-based stats. Identities = 83/423 (19%), Positives = 159/423 (37%), Gaps = 52/423 (12%) Query: 7 VNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCG 66 ++AFYAS E P+L GKP+++ + N V A + EA+A GV P K ++L + Sbjct: 1 MDAFYASLEVARHPELKGKPLIIGTGNRAVVSAASYEARAYGVNSAMPVVKARNLCPQG- 59 Query: 67 VVCFSSNYELYADMSNRVMS-TLEELSPRVEIYSIDEAFCDL-TGVRNCRDLTDFGREIR 124 + + Y+ +S + ++ +VE S+DE + ++ + + + + G +R Sbjct: 60 -IFLPVDIPYYSSVSKSIFENIFLHITNQVEKVSVDECYMNVKSALLQWKSPVNIGTWVR 118 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 V ++ H+T VGIA K +AK+A+ AK L + +S +P+ + Sbjct: 119 KEVFEKYHITCSVGIASNKLIAKMASTNAKPNGM------LLIPQKCNEDFVSIMPLRAI 172 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN--VVLERTVRELRGEPCLQLEEFAP 242 GIG + KL+ G+ TV L + D + + ++ + +RG + AP Sbjct: 173 PGIGSSLIHKLEDWGLSTVASLKNVDEATLTRITGSQILARMIYQSVRGIDERTVTAHAP 232 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 + I R+ T+ +++Q + + ++LR+ R I+ ++ Sbjct: 233 E-KSIGTERTLDTDTTNENAVKQLLQQCCSEVTQQLRNRKLMARTITLKLRFGD------ 285 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-------------RYQKAGVMLGD 349 + + S L T + + L H + AGV + Sbjct: 286 LHYVTRSSTLQNATDSTHEFYEHVVVLLSRANPTVHNYILGGNNTKLLSPVRLAGVTANN 345 Query: 350 FFSQGVA--QLNLFDDNAPRPGSEQ------------------LMTVMDTLNAKEGRGTL 389 Q +L D + +D + K G Sbjct: 346 LVPANKVSLQPSLNDILEENTRESKNPTQNIMSTMNKNTRLRHAEHALDAVRKKYGNNAA 405 Query: 390 YFA 392 + Sbjct: 406 HIG 408 >UniRef50_A4BJD8 DNA polymerase IV n=1 Tax=Reinekea blandensis MED297 RepID=A4BJD8_9GAMM Length = 365 Score = 351 bits (901), Expect = 4e-95, Method: Composition-based stats. Identities = 70/379 (18%), Positives = 144/379 (37%), Gaps = 24/379 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D + +YA+ E P+L G+PV V + N EA+ G+ P + Sbjct: 5 IIHIDCDCYYAALEMRDFPELRGRPVAVGGQGPRSVLSTCNYEARHYGLHSAMPSRRALS 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDF 119 L G++ +++Y +S ++ + R+E S+DEAF D+T + Sbjct: 65 LCP--GLIIQPHRFDVYRAVSEQIRQIFSRYTDRIEPLSLDEAFLDVTDSTWFGGSASML 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IR ++Q T +TV GIA K LAK+A+ K + + E + +S+L Sbjct: 123 AEHIRQEIVQETGITVSAGIAPNKFLAKVASEWRKPNGLYS------ISPEAVDEFLSSL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G + S+KL G+ T D+ + + ++F + RG + Sbjct: 177 PLKKINGVGSKFSQKLAEHGLHTCGDVLRWSLPRLTQYFGKSGLWLYQRARGIDHRPVG- 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH-QYCRFISTFIKTSPFA 298 ++ + +F + + + +L ++ + + ++ + F+ Sbjct: 236 VRSDRKSLSVEHTFDTDLAGESACLTQLTPLLDTLNRRLAAKDPLPIKGVFVKVRFNDFS 295 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + L ++ AA + ++ + G+ + Q QL Sbjct: 296 ------TTTMERGLPCLRASYEQLLKAACQ------KSHRGVRLLGLGVRFEEKQSKDQL 343 Query: 359 NLFDDNAPRPGSEQLMTVM 377 L+ + L + + Sbjct: 344 ELWPVATAQGNRASLESSL 362 >UniRef50_C3Y6K1 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3Y6K1_BRAFL Length = 1191 Score = 350 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 75/414 (18%), Positives = 138/414 (33%), Gaps = 72/414 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-------------------------- 34 + D++ F+ S P+L GKPV V + Sbjct: 380 VVMHLDMDCFFVSVGLRNHPNLRGKPVAVTHSKGKGHEQKIRPGMDPEYERAYWEKRAPH 439 Query: 35 -------------------------GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVC 69 + + + EA+ GVK G L + Sbjct: 440 RHSITDKTEDNATRGNAQRDTYMSFSEIASCSYEARKAGVKNGMFMGPALKLCPDLKTI- 498 Query: 70 FSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DFGREIRATV 127 ++E Y +++ + L + +E S DEAF D+T + T D +R + Sbjct: 499 -PYDFEGYKEVAQEMYGILASYTHEIEAVSCDEAFVDVTDILADTGATPDDLATVLRKEI 557 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI 187 L++T VG+A + LA++A AK + E +S V ++ G+ Sbjct: 558 LEKTQCPASVGLASSVLLARMATKRAKPNGQFYL------PPEEVLDFVSPQTVRELPGV 611 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQE 246 GR + +L MG+ T DL + +++ F + R RG+ QL+ ++ Sbjct: 612 GRSLESRLKVMGVVTCGDLQKVTLPTLQREFGPKTGQALYRSCRGQDDRQLK-VERERKS 670 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT---------SPF 297 + ++G R T + + A +L+ + ++ + S F Sbjct: 671 VSAEINYGIRFTKDTEAETFMYNLAEEVQRRLQKAGLKGKTVTLKVMARKADAPVEPSKF 730 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + S S L T D + I A L + + G+ + Sbjct: 731 MGHGICDSLSKSSTLGLATDDHKVIGKEAWNILCQMKLLPSDNRGLGIQITRLV 784 >UniRef50_B1VHB3 DNA polymerase IV n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VHB3_CORU7 Length = 477 Score = 350 bits (900), Expect = 5e-95, Method: Composition-based stats. Identities = 92/363 (25%), Positives = 148/363 (40%), Gaps = 20/363 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D++AFYAS E + RP L +PV+V + G V + EA+A G + P + Sbjct: 4 VAHIDMDAFYASVEQLTRPTLRDRPVLVGGMSGRGVVAGASYEARAYGARSAMPMHQAIR 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L R + LY +S R+ + E + VE S+DE F + G+ + + Sbjct: 64 LCRN-RAIVIQPRSVLYKMISRRIFQVIAEHAGVVEQLSVDEGFAEPQGLVDAAAARRWA 122 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +++ V + T L +G+A TK AK+A+ AK E + P Sbjct: 123 EDLQRAVEEATELPCSIGMASTKLDAKMASDLAKPHGIFVV--------EDRMATFGPRP 174 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V D+WGIGR KL +G+ T+ D D ++ V G+ + Sbjct: 175 VGDLWGIGRVAQAKLADIGVHTIQQFVDMDPTDVKSLLGKVGLEVQVMAGGDDPRPVAP- 233 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++I ++ Y + + A +A +LR + + R I+ I+TS FAL+ Sbjct: 234 RAEAKQISAEQTLPVDARTYRDVLNIMELSARQAYRRLRKDGRAARTITVKIRTSDFALH 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S L PT D ++ AA L +G + GV Q L Sbjct: 294 ------TRSTTLPAPTDDFEQLLRAARAVLPRPEDSG-AVRLVGVGFSGLSHD--RQEML 344 Query: 361 FDD 363 F + Sbjct: 345 FPE 347 >UniRef50_A5Z8E0 Putative uncharacterized protein n=10 Tax=Clostridiales RepID=A5Z8E0_9FIRM Length = 428 Score = 350 bits (900), Expect = 5e-95, Method: Composition-based stats. Identities = 82/433 (18%), Positives = 161/433 (37%), Gaps = 44/433 (10%) Query: 1 MFALCDVNAFYASC-------ETVFRP---DLWGKPVVVLSNN---DGCVIARNAEAKAL 47 + DVN+ Y S E D+ P ++ + G V+A++ AK Sbjct: 3 IIFHIDVNSAYLSWTAVKLLKEATKDEKKIDIRNIPAIIGGDREKRHGIVLAKSISAKKF 62 Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 G+ G+P ++ + Y + S+++M+ L +P +E S+DE + D Sbjct: 63 GIVTGEPIANALQKCP--NILIVPPEHGYYNEQSHKLMNLLRTFTPDIEQVSVDECYMDF 120 Query: 108 TGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL 166 +G++N +I+ TV ++ TV VGI+ K LAK+A+ K + T Sbjct: 121 SGIQNEYPSPLACAYKIKDTVKEKLGFTVNVGISDVKVLAKMASDFTKPDKVHTL----- 175 Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 ++ M LPV++++ G+ L +GI + LA + + H + Sbjct: 176 -YRREIKEKMWQLPVEELYMAGKSSVNTLHKLGIYNIGQLATSPEYILEAHLKKHGKILW 234 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 G + + + S + + + + + + + + A +LR Q + Sbjct: 235 EYANGIDKSVVNTKREELKGVGNSITLPYDLDNMEEIEKILLQLSEKVAGRLRKGKQMAK 294 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA--GHRYQKAG 344 ++ +K + F S L T +I + +W+ + G Sbjct: 295 TVAVEVKYNDFIK------ASRQTTLDRCTDSGTEIYQLSKELFRELWEKDGNKSVRLLG 348 Query: 345 VMLGDFFSQGV-AQLNLFDDNAP-------------RPGSEQLMTVMDTLNAKEGRGTLY 390 + + QG Q+++ D A R ++L +D + K G + Sbjct: 349 IRTANLEEQGALEQMSIMDIMAQTTKKQQNATTNISREKMKKLDKALDAIKNKYGEDKIK 408 Query: 391 FAGQGIQQQWQMK 403 A +Q MK Sbjct: 409 RASLLAEQTVDMK 421 >UniRef50_B1YIX5 DNA-directed DNA polymerase n=2 Tax=Exiguobacterium RepID=B1YIX5_EXIS2 Length = 441 Score = 350 bits (899), Expect = 5e-95, Method: Composition-based stats. Identities = 105/422 (24%), Positives = 174/422 (41%), Gaps = 28/422 (6%) Query: 2 FALCDVNAFYASCETVFR--PDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFK 57 D +FYASCE +R P L K VV L+ + ++A + K LG+K ++ Sbjct: 12 IFCVDSVSFYASCECRYRNLPPLTTKLAVVSDLTRSGSVILAASPALKQLGIKTASRLYQ 71 Query: 58 QKDLF--RRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLTGVRNC 113 + L R +V Y S V+ L + +P + IYSIDE F D++G Sbjct: 72 IEQLPYRERKQIVLVEPRMLAYMKTSIEVLDVLHQFAPPDAIRIYSIDENFVDMSGTERL 131 Query: 114 RDL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAA-KKWQRQTGGVVDLSNLER 171 T+ +I+ + Q+T + V +GI +AKL K+ G D+S Sbjct: 132 FGSDTETAWKIQTAIWQQTGIPVRIGIGPNNVIAKLVLDLRGKREGIAQCGYADVS---- 187 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 +L+ PV +WG+GR + + L MGI T+ DLA + + + F V+ G Sbjct: 188 --RLLHDFPVRKMWGVGRMMEQHLSVMGIHTIGDLAAAPVEDLHERFGVIGAELWHHAWG 245 Query: 232 EPCLQ--------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 TK+ I + Y +R + A+ A ++R +Q Sbjct: 246 IDGSPTIIDPMTLFRTAPDTKRTIGHGVTLMRDYYQYEQIRLVLAELASDVAARVRFSNQ 305 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 + ++ S G S ++L PT D R ++ + + W G + Sbjct: 306 VGWTVHLGVRYSRH---VARDGFSKQLRLPYPTADERLLLRHILQLFEPNWLDGEPVRFL 362 Query: 344 GVMLGDFFSQ-GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 V LG G QL+LF+DN ++L+ +D +N + G+GT+ A + Sbjct: 363 SVALGQLTPDQGTLQLSLFEDNTKVWRRKRLLKAIDHVNLRYGKGTIRLAVSFLDTSVAK 422 Query: 403 KR 404 +R Sbjct: 423 RR 424 >UniRef50_Q98JM5 DNA polymerase IV 2 n=4 Tax=Bacteria RepID=DPO42_RHILO Length = 415 Score = 350 bits (899), Expect = 6e-95, Method: Composition-based stats. Identities = 91/413 (22%), Positives = 169/413 (40%), Gaps = 32/413 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E + P L GKP+ V G V+A + EA+A GV+ G P K ++L Sbjct: 7 ILHADLDAFYASVEQLLDPSLRGKPIAVGG---GVVLAASYEARAFGVRGGMPGRKAREL 63 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFG 120 + ++ N+ Y + + + L++ +P VE SIDEAF D+ G + D Sbjct: 64 CPQ--LIFVGGNFSHYQRLGDAAIKVLDDFTPVVERISIDEAFADVAGCTHLFGQPRDIA 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR V L + +G+A+TK LAK+A+ AK + + + + + LP Sbjct: 122 TAIRHRVRAELGLPISIGVARTKHLAKIASQVAKPDG------LVVVDPGTELDFLHDLP 175 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 V +WG+G +L +GI+T+ +LA T + + E+ +LE Sbjct: 176 VSLMWGVGPATKSRLAEIGIQTIGELARTHSGALTRLLGPAAGEKLAALAWNRDPRKLET 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + G++ + + A R A +LR++ + R ++ ++ + + Sbjct: 236 RRRA-HSAGAQSALGQKPAVARVIVPTLLHLADRVASRLRAKARPGRTVTVRVRFADLSA 294 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFSQGVA 356 + S+ L P + + A + + + + Sbjct: 295 ------VTRSITLDQPISATTMLAEIAGDLVRGVLADHPREKTISLLAISVSHLEESAEL 348 Query: 357 QLNL---FDDNAPRPGSEQ------LMTVMDTLNAKEGRGTLYFAGQGIQQQW 400 QL+L D RPGS++ +D + + G+ + + ++ Sbjct: 349 QLDLPLGLADEKRRPGSKKGLARFGADRAIDKIRERFGKQAVGYGTVALEAAR 401 >UniRef50_B9XRF0 DNA polymerase III, alpha subunit n=1 Tax=bacterium Ellin514 RepID=B9XRF0_9BACT Length = 1420 Score = 350 bits (898), Expect = 6e-95, Method: Composition-based stats. Identities = 85/411 (20%), Positives = 158/411 (38%), Gaps = 24/411 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+AS E L GK + V G + + + EA+ GV P + + L Sbjct: 13 IVHLDADAFFASVEQAADARLRGKAMAVGGEKRGIIASASYEARKFGVYTPMPTVRARKL 72 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + ++ ++E Y S + S + +P VEI SIDE + DLTG R + Sbjct: 73 CPK--LIIVPGDFEKYERFSRWMFSYAYDFTPEVEISSIDEGYFDLTGARK--SPLEIAE 128 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 IR + +TV GIA K ++++A+ K + L + + LP Sbjct: 129 IIRGAIRGALKITVSEGIACNKLVSQIASKLNKPAAFKQ------VPLGGEIPFLHPLPN 182 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 + G+G + KL+A G+ + +A T + ++ + G L + + Sbjct: 183 KWLPGVGPTTATKLNAAGLIRIGHIAKTPLDLLQLLMGNMARSLKEFADGIDERPLIQES 242 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 + +FG TD + + A ++R++ + R ++ ++ + A ++ Sbjct: 243 EPAKSYGHQETFGVDQTDEEFIEATLKRMADSLMAQVRADDKTIRTLTVKVRYNDMAEDQ 302 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-QLNL 360 LL PT DI + W+ + + L + +S +L L Sbjct: 303 AGES------LLEPTDLETDIYGRIRVLMKQAWRRRVSLRMVSLRLSNVYSGIFRAELAL 356 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 +L + +D L G+ + +Q++ A SP Y Sbjct: 357 ERSAEQHEAKRRLASAVDQLRQSRGKQVILRG-----HDFQLREA--SPDY 400 >UniRef50_B0TQD1 DNA polymerase IV n=7 Tax=Bacteria RepID=DPO4_SHEHH Length = 358 Score = 350 bits (898), Expect = 7e-95, Method: Composition-based stats. Identities = 69/374 (18%), Positives = 137/374 (36%), Gaps = 36/374 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FYA+ E P+L GKP+ V + G + N EA+ GV+ Sbjct: 4 IIHVDMDCFYAAVEMRDFPELRGKPIAVGGRSDRRGVISTCNYEARQFGVRSAMASGYAL 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L ++ ++Y ++SN++ + E + +E S+DEA+ D+T +C T Sbjct: 64 KLCP--DLILVPGRMQVYKEVSNQIRAVFERYTDLIEPLSLDEAYLDVTESSHCKGSATL 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 IRA +L T LT GIA K LAK+A+ K + + E + + Sbjct: 122 MAEAIRAEILAETGLTASAGIAPVKFLAKIASDLNKPNGQY------VIRPEMIEEFVKT 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + G+G+ +KKL +G+ T D+ + + F + +G + Sbjct: 176 LPLIKIPGVGKVTAKKLADLGLHTCSDIQAYPEPKLVERFGKFGSVLIERSKGIDKRAIL 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS--EHQYCRFISTFIKTSP 296 ++ + + + I R + ++ + + +K Sbjct: 236 PNR-ERKSVGVETTLAKDIHTLEQCRAVMPQLIQELGARVSRSAKDRAINKQVVKLKFED 294 Query: 297 FALNEPYYGNSASVKLLTPTQ--DSRDIINAATRSLDAIWQAGHRYQKAGVML------- 347 F + + ++++ + G + GV + Sbjct: 295 F----------KQTTIEHRSDEISVNLFYQLLEQAMERQHERG--IRLLGVSVGLASNSI 342 Query: 348 -GDFFSQGVAQLNL 360 + +Q++L Sbjct: 343 ASEQADVDSSQMDL 356 >UniRef50_UPI0001C34BBE DNA-directed DNA polymerase n=3 Tax=Neisseria subflava NJ9703 RepID=UPI0001C34BBE Length = 344 Score = 349 bits (897), Expect = 1e-94, Method: Composition-based stats. Identities = 152/345 (44%), Positives = 213/345 (61%), Gaps = 5/345 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N+FY SCE VFRP+L P+VVLSNNDGCV+AR+ EAKALG+KMG+P+F+ K Sbjct: 1 MFALIDGNSFYCSCERVFRPELKNVPIVVLSNNDGCVVARSTEAKALGIKMGEPYFRVKH 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + +SSNYELYAD+S R+M T+ P VE+YSIDE F D++G+ +LT+ G Sbjct: 61 LVSQGRLKAYSSNYELYADLSRRMMETIAGCVPAVEVYSIDECFADMSGI---ENLTELG 117 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL--SNLERQRKLMSA 178 +IR VLQ + VGIA TKTLAK NH AK++ GVV N + + + + Sbjct: 118 CQIRQRVLQWVGIPTCVGIAPTKTLAKFCNHLAKRYPDHFRGVVVWGDWNETIRLRALRS 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 VD++WGIGRR + KL GI+T LD + D IR+ + V +ERT RE++G C L Sbjct: 178 QGVDEIWGIGRRTADKLSEQGIRTALDFVEADTATIRRRYGVTVERTQREMQGIVCDGLH 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 A +Q ++ SRSFG RI +++ A+ + + AE LR + +S F+ T F Sbjct: 238 PNAQPRQNLVRSRSFGTRIETLEALQAAVTHHVSLGAEALRKDGLTASAVSVFLHTDFFR 297 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 +EP Y NS + L+ T D+ + A R L I+++G+ Y+K Sbjct: 298 EDEPQYHNSLAQNLIVSTADTVHLNRIAQRLLADIYRSGYLYKKM 342 >UniRef50_C2HDM1 Possible DNA-directed DNA polymerase n=83 Tax=Firmicutes RepID=C2HDM1_ENTFC Length = 471 Score = 348 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 91/424 (21%), Positives = 167/424 (39%), Gaps = 24/424 (5%) Query: 2 FALCDVNAFYASCETVF-RPDLWGKPVVVLS--------NNDGCVIARNAEAKA-LGVKM 51 D +FYAS E V D +VV+S G ++A + AK G+ Sbjct: 30 ILCIDCKSFYASVECVEKDLDPLTTKLVVMSYPSDSTETRGSGLILASSPAAKKAYGITN 89 Query: 52 GDPWFKQKDLF-RRC-GVVCFSSNYELYADMSNRVMSTLEELSPRV--EIYSIDEAFCDL 107 + +DL + + Y + + + + ++ + +YS+DE+F D+ Sbjct: 90 ---ISRARDLPFPYPSDLYIVAPRMAYYMEKNREINTIYKKYADEANHHVYSVDESFLDV 146 Query: 108 TGVRNCR---DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV 164 T + D + I V ++T + +GI LAKLA K +Q + Sbjct: 147 TNSMALFGKTNAYDMAKLIHKDVFEQTGIYTTIGIGDNPLLAKLALDNGSKDGKQM--IA 204 Query: 165 DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER 224 + + KL + + D WGIG+R +K+L MGI +V DLA D ++ ++ + Sbjct: 205 EWRYEDVPEKLWTISDITDFWGIGKRTAKRLKQMGIHSVYDLAHADYYHLKSTLGIIGTQ 264 Query: 225 TVRELRGEPCLQL-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 G L +E+ P + I S+ T + I A + +LR Sbjct: 265 LYAHAWGIDRSFLGQEYIPKSRSIGNSQILDRDYTRQEEIEIVIKEMADQVGTRLRRSAA 324 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 + +S ++ S L+ + T SR++ +A ++ ++ Sbjct: 325 KAQVVSLWVGYSLGYLDPNGKTGFHQQTKIEATNASRNLADALLTIFHQHYR-CQDIRRI 383 Query: 344 GVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 GV + QLNLF++ + ++ V+DT+ K G ++ A +Q + Sbjct: 384 GVNCSNLVYATGLQLNLFENPEKQINEAKVDFVVDTIRKKYGFKSIIHAHSLLQGGRAIA 443 Query: 404 RAML 407 R+ L Sbjct: 444 RSSL 447 >UniRef50_A3EWL3 Polymerase ATREV1-1105 n=8 Tax=rosids RepID=A3EWL3_ARATH Length = 1105 Score = 348 bits (895), Expect = 2e-94, Method: Composition-based stats. Identities = 73/371 (19%), Positives = 133/371 (35%), Gaps = 27/371 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN----NDGCVIARNAEAKALGVKMGDPWFK 57 D++ F+ S R +L KPV V + + + N A+A GVK G Sbjct: 375 IIHIDLDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYGVKAGMFVRH 434 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 KDL + +V N+E Y +++++ L +V+ S DEAF D++ + + Sbjct: 435 AKDLCPQ--LVIVPYNFEAYEEVADQFYDILHRHCRKVQALSCDEAFLDVSDLSDVET-E 491 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 IR +L+ T + GI T +A+LA AK + + E+ + + Sbjct: 492 VLASTIRNEILETTGCSASAGIGGTMLMARLATRVAKPAGQLY------ISAEKVEEFLD 545 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 LPV + G+G + +KL I+T L ++K F E RG Sbjct: 546 QLPVGTLPGVGSVLKEKLVKQNIQTCGQLRLISKDSLQKDFGVKTGEMLWSYSRGLDLRS 605 Query: 237 LEEFAPTKQEIICSRSFGERITDYPS----MRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + + I ++G R D ++ + + +L+ R + I Sbjct: 606 VTAVQ-ESKSIGAEVNWGVRFRDQQDVFILVQHFLQCLCKEVSLRLQGCEMIGRTFTLKI 664 Query: 293 KTS--------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 K + S S+ + T D + + + + + G Sbjct: 665 KKRKKDAEEPTKYMGCGDCDNLSRSITVPAATDDIEVLQRISKKLFGSFCLDVKEVRGVG 724 Query: 345 VMLGDFFSQGV 355 + + S Sbjct: 725 LQVSKLDSADP 735 >UniRef50_C0ZB00 DNA polymerase IV n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZB00_BREBN Length = 350 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 76/365 (20%), Positives = 134/365 (36%), Gaps = 27/365 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + RP+L GKPV+V N G V + EA+ GV+ P + Sbjct: 4 ILHLDIDAFFASVEQLDRPELRGKPVIVGGTGNRGVVSTCSYEARKYGVRSAMPVAMARK 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + Y Y + S V + R + +DEA+ D++ + Sbjct: 64 KCPQG--YYLPVRYSRYIEKSAEVRQIFTSYTERYQTVGLDEAYLDVSHY---ENAVPIA 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R+I+ + + T LT +G++ +LAK+A+ K + E+ ++ LP Sbjct: 119 RDIKRRIKRETGLTCSIGLSYNMSLAKIASDLKKPDA------FVIIRPEQALDVLRPLP 172 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + + G+G++ + L GI+TV D + F RGE ++ E Sbjct: 173 IGTLHGVGKKSQELLAKKGIETVEDFWRLSLDEATTLFGKFGRSLYYRARGEDNREI-EM 231 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + + D ++ S E +R E + I+ IK + F Sbjct: 232 DRAPKSSSRETTLPFDLFDRDAIAPIATSLLREVEEDIREEGVEPQTITLKIKYADFTQR 291 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG---VAQ 357 + A L + + GV +F Q Q Sbjct: 292 TKQHKAVAGAN-----------WQELLDDLLDAFDYTAGVRLVGVGFSNFAEQQGERYEQ 340 Query: 358 LNLFD 362 L++F Sbjct: 341 LSMFS 345 >UniRef50_D1JEL0 DNA polymerase IV n=1 Tax=uncultured archaeon RepID=D1JEL0_9ARCH Length = 363 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 78/371 (21%), Positives = 146/371 (39%), Gaps = 30/371 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-----------DGCVIARNAEAKALGV 49 + D+++F++S E +P L G PV+V G V + EA+ G+ Sbjct: 7 VILHVDMDSFFSSVEEREKPKLKGLPVIVGGKITPEWEKEDSKIRGVVSTCSYEARKYGI 66 Query: 50 KMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL-T 108 K L N LY +S +M+ L + + ++E SIDEAF D+ T Sbjct: 67 HSAMALSKAYKLCPDAT--FLPVNMPLYKHVSGEIMNILRKYADKMEQVSIDEAFLDVST 124 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 V + D + + I+ + LT +GIA KT+AK+A+ K L+ Sbjct: 125 KVEDWNDAREHAKRIKKAIQVEEGLTCSIGIAPNKTIAKIASDFVKPDG--------LTV 176 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 +E + ++ L V ++ G+G + K L MGI + LA D++ + +R Sbjct: 177 VEEAKAFLAPLDVKNIPGVGPKTDKILRMMGIDQIGQLASGDVQKLVAAIGQSGKRLHLV 236 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G ++EE ++ + R+F D + + + + A + + + Sbjct: 237 ANGIDKSEVEE-KWVRKSLSRERTFVNDTRDASVLTKCVDALAEEVYNAMTDAGFVFKTV 295 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAGVML 347 S +K F + + + L T D + A + + + + GV + Sbjct: 296 SIKVKFEDFTI------ATRAKTLKTYHCDLSTLKRTANELMTELNNAKSKKKRLIGVRI 349 Query: 348 GDFFSQGVAQL 358 + + Q+ Sbjct: 350 SNLGAVDEKQM 360 >UniRef50_Q2LSC9 Nucleotidyltransferase/DNA polymerase protein n=2 Tax=Syntrophus aciditrophicus SB RepID=Q2LSC9_SYNAS Length = 435 Score = 347 bits (892), Expect = 4e-94, Method: Composition-based stats. Identities = 109/418 (26%), Positives = 177/418 (42%), Gaps = 19/418 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+ SCE P+L GKP ++ G V + AK GV G P + + + Sbjct: 15 ILHIDGDAFFTSCEEAIHPELRGKP-IIAGGERGIVACASYAAKKQGVMRGVPLHQARKM 73 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL--TDF 119 G+V S+YE Y+ S R+ + + +P+VE YSIDEAF D+TG+R Sbjct: 74 CP--GLVILPSDYETYSLFSRRMFNVMRRFTPQVEEYSIDEAFADITGMRRPLRASYETI 131 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 I+ + + +TV VG++ TK LAK+A+ K + + L Sbjct: 132 AVNIKNEIARELGITVSVGLSITKVLAKVASKHRKPNG------FTCIPGKSIAIYLEHL 185 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL-E 238 PV+ +WGIG + L MG++T L+ A ++K F RELRG+ + Sbjct: 186 PVEKIWGIGHATASYLHKMGVRTALEFARLPEVLVKKRFTKPGVEIWRELRGDSVYPVCA 245 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E I +++F D + + A K R H I+ F+K + F+ Sbjct: 246 EEKSLYASISKTKTFSPASGDADYLFAHLMRNLESACIKARRYHLAASRIAAFLKRNDFS 305 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 ++L P+ ++ A +++ G Y+ G++L + Q Sbjct: 306 YAG------REIRLNRPSVYPLELSIALRNLFIDVYRPGTLYRSTGIVLLELSGDSGTQY 359 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ-GIQQQWQMKRAMLSPRYTTRS 415 LFDD + V D + AK G+ +L+ I+ + KR + R TR Sbjct: 360 TLFDDVVRADRVRDIYRVTDEVGAKYGKHSLHLGASHFIELLGRGKRGEPTARERTRF 417 >UniRef50_Q2L7B2 REV1 n=7 Tax=Sordariomycetes RepID=Q2L7B2_NEUCR Length = 1343 Score = 347 bits (892), Expect = 4e-94, Method: Composition-based stats. Identities = 78/415 (18%), Positives = 140/415 (33%), Gaps = 46/415 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+ KP VV N + + N A+ GVK G Sbjct: 368 IMHVDFDSFFCAVSLKKAPEYRDKPAVVAHGNGKGSEIASCNYPARKFGVKNGMWMKHAL 427 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV--------- 110 +L + ++ Y + S + + + V+ SIDEA D+T + Sbjct: 428 ELCP--DLKILPYDFPGYEEASRQFYDAILGIGGVVQSVSIDEALIDVTDIVMAEAGSSG 485 Query: 111 ---------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + ++R + ++T V VGI LAK+A AK + Sbjct: 486 IGISEGSIWREQEKVDQMASKLRDRIKEQTDCHVSVGIGANILLAKVALRKAKPAGQYQ- 544 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 E L+ L V+D+ G+ I KL+ +GIK V D+ T + Sbjct: 545 -----IKPEEALDLLGELNVEDLPGVAHSIGAKLEELGIKFVKDIRQTSKERLISALGPK 599 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 E+ RG ++ E P ++ + ++G R + + + S + +L S Sbjct: 600 TGEKLWEYSRGIDRTEVGEQ-PIRKSVSAEVNWGIRFVNQEEAEEFVRSLSQELERRLLS 658 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 E + ++ I + + SV T I A L Sbjct: 659 EGVKGKHLTMKIMRRAADAPLDPPKHLGHGKCDTFNKSVSFGVGTNSGEVIGKEAVAILR 718 Query: 332 AIWQAGHRYQKAGVMLGDFFS------QGVAQLNL-FDDNAPRPGSEQLMTVMDT 379 + + + G+ + Q +Q L F A ++ +D Sbjct: 719 SYKFSPGDLRGLGIQMTKLEPLKPSAAQQGSQKKLSFGAAATSSAKKRKAEAIDD 773 >UniRef50_D2A3T9 Putative uncharacterized protein GLEAN_14950 n=1 Tax=Tribolium castaneum RepID=D2A3T9_TRICA Length = 825 Score = 347 bits (890), Expect = 6e-94, Method: Composition-based stats. Identities = 71/455 (15%), Positives = 147/455 (32%), Gaps = 60/455 (13%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-------------------------- 34 + D++ F+ S RP+L G PV V Sbjct: 209 VVMHIDMDCFFVSVGLRTRPELRGLPVAVTHARRAQLNPNKEREETVTLNMDRMPEGVEL 268 Query: 35 ---------GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 V + + EA+ GVK G L + + ++E Y ++S + Sbjct: 269 RMIDGRSSMSEVASCSYEARKCGVKNGMFLGAAAKLCPQIKTI--PYDFEGYKEVSMVLY 326 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDL--TDFGREIRATVLQRTHLTVGVGIAQTK 143 TL + +E S DE + +++ + DL D+ IR + T G + Sbjct: 327 KTLASYTLNIEAVSCDEMYVEVSDLLKSYDLSVEDWANHIRDEIKTATGCPCSTGFGSNR 386 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 A+LA AK E ++ + + D+ G+G KL ++G++T Sbjct: 387 LQARLATKKAKPDGSYYL------KPEDVESYLAEIALADLPGVGYATLSKLKSLGLETC 440 Query: 204 LDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 D+ + +++ + E + + +G L + ++ + ++G R Sbjct: 441 GDVQVASLGVLQRELGAKMGETLLEQAKGIDRKPL-NYTHERKSVSAEINYGIRFKTINE 499 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLL 313 + S +L + ++ + T+ F + S S L Sbjct: 500 CYNFLESLGNEVWSRLNEIKMRAKTVTLKLMIRAADAPLETAKFLGHGLCDSVSKSQTLA 559 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 D + + D + + GV L L N + S+++ Sbjct: 560 HHISDVKILHREVRTLYDKMNVNYAELRGLGVQLTKLEKLAPINPTL--SNFLQQESKKI 617 Query: 374 MTVMDTLNAKEGRGTLYFAG-QGIQQQWQMKRAML 407 D ++ GR + + + + + ++ Sbjct: 618 QPTGDKTASR-GRELVRPPSGEKVATRGRPRKNSK 651 >UniRef50_B5JKI6 ImpB/MucB/SamB family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKI6_9BACT Length = 361 Score = 346 bits (889), Expect = 9e-94, Method: Composition-based stats. Identities = 72/362 (19%), Positives = 135/362 (37%), Gaps = 27/362 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FYA+ E P+L G+PV V + G + N EA+A G+ P ++ Sbjct: 14 IIHIDMDCFYAAIEVRDHPELRGEPVAVGGRSSRRGVLTTCNYEARAFGIHSAMPTYQAM 73 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 ++ +E+Y + S R+ + + + +E S+DEA+ D++ + + Sbjct: 74 QRCPH--LIIKPVRFEVYKNESRRIRAIFADYTSAIEPLSLDEAYLDVSHLDRP--ASAI 129 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIR + Q T L GIA K LAK+A+ K + ++ M L Sbjct: 130 ALEIRKRIRQTTGLNASAGIAPNKMLAKIASDWRKPNGQYE------ITPDQIADFMREL 183 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G++ + +L ++ I T DL ++KHF RG + Sbjct: 184 PVSKIWGVGKKSAARLASLDIATCGDLQQKTRLELQKHFGKFGSELYELSRGIDHRDVVS 243 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR--SEHQYCRFISTFIKTSPF 297 ++ + C R++ + +Q + L + + K S F Sbjct: 244 NR-IRKSMSCERTYATDLHSLDDRQQHAADIFQELSADLARFKSDRPIHKLFVKCKYSDF 302 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 S L +D+ ++ + + G+ + F Sbjct: 303 T----RTSIERSG-LPFTLASFQDL------LAESYHRRSDPIRLLGLGV-RFTDPETQT 350 Query: 358 LN 359 + Sbjct: 351 RS 352 >UniRef50_C5JS23 DNA damage repair protein Mus42 n=2 Tax=Ajellomyces dermatitidis RepID=C5JS23_AJEDS Length = 1171 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 69/428 (16%), Positives = 135/428 (31%), Gaps = 52/428 (12%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+L +PV + + + N A++ G+K G Sbjct: 372 ILHVDFDSFFAAVSIRKHPELVDQPVAIAHGTGPGSEIASCNYPARSFGIKNGMWMKAAL 431 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV--------- 110 + + ++ Y S + + V+ SIDEA D+TGV Sbjct: 432 QMCP--NLKVLPYDFAAYEQASRAFYEVILSIDGIVQSVSIDEALVDITGVCLDAGGSDG 489 Query: 111 ---------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + + +R +V +RT + VGI A++A AK + Sbjct: 490 RGISEGSIWREQEKADEIAQNLRNSVKERTGCNISVGIGGNVLQARVALRKAKPAGQFQL 549 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 + + L V D+ G+ + KL+ +G+ V D+ D + Sbjct: 550 ------KPDAVLDFIGTLAVKDLPGVAHSLGAKLEELGVTFVKDIRDLSREKLTSSLGPK 603 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG ++ ++ + ++G R + + + S +L Sbjct: 604 TGAKLWDFARGIDNTEVG-VQAPRKSVSAEINWGIRFVNQAQAEEFVQSLCDELHRRLVE 662 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ I + + SV L T S I A L Sbjct: 663 NLVKGKQLTMRIMKRSADAPLEPVKHLGHGKCDTFNKSVNLGVATNASDIIGREAITILR 722 Query: 332 AIWQAGHRYQKAGVMLGDFFS----------QGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 + + GV + Q++ + R + D +N Sbjct: 723 GFKFSPGDLRGLGVQMTKLEPVKQNHARELDSSQKQISFKPASPTRQRETPIDP--DEIN 780 Query: 382 A-KEGRGT 388 ++G T Sbjct: 781 TPRKGDTT 788 >UniRef50_C2KZY4 DNA polymerase IV n=2 Tax=Clostridiales RepID=C2KZY4_9FIRM Length = 418 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 88/367 (23%), Positives = 148/367 (40%), Gaps = 21/367 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AFYAS E P L KP+++ G V N EA+ GV+ + Sbjct: 14 IILHVDMDAFYASVEMRDNPTLKDKPLIIGAKPTERGVVATCNYEARKYGVRSAMNSKEA 73 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLT 117 L + V ++E Y +S + LE + +VE ++DE + DLT ++ + Sbjct: 74 FRLCPKA--VFLYPDFEKYKAVSEELHEILESYTKQVEYIALDEGYLDLTEVAKDFSEAE 131 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 GREI+ V + LT VGIA KT AK A+ K G + E +L+ Sbjct: 132 KIGREIQRRVAEELRLTCSVGIAYGKTAAKTASEEKKPN-----GFFMIQRREDYVELLR 186 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 V ++ +G + +++L + GI TV DL + + +R + + G ++ Sbjct: 187 DRDVRALFTVGAKTAERLYSFGIYTVKDLQEKEKEVLR-LLGNQGKMLLELSYGIDHRKV 245 Query: 238 EEFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + P Q I +F E +TDY + + + R + + Y R +S I + Sbjct: 246 VPYRPEDTQSISKEMTFQEDVTDYSFLDDVLFLLSFRVENRAKRYGLYARGVSLKITFAD 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + S + TQ + + A+ L I R + G Sbjct: 306 MK------TITRSALISESTQSAFSLYKNASALLQQI--PRRRVRLIGEGFYHLEENEGR 357 Query: 357 QLNLFDD 363 QL+ F D Sbjct: 358 QLS-FSD 363 >UniRef50_C8V695 Deoxycytidyl transferase (Eurofung) n=2 Tax=Emericella nidulans RepID=C8V695_EMENI Length = 1139 Score = 345 bits (887), Expect = 2e-93, Method: Composition-based stats. Identities = 73/437 (16%), Positives = 141/437 (32%), Gaps = 52/437 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D + F+A+ T+ P+L GKPV + + + N A+A GVK G Sbjct: 342 IMHVDFDCFFAAVSTLKHPELEGKPVAIAHGTGTGSEIASCNYVARASGVKNGMWMKGAL 401 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG---------- 109 + ++ Y + S + + + V+ SIDEA D+T Sbjct: 402 QACP--DLRVLPYDFPAYEEASRKFYRAILGIDGLVQSVSIDEALVDITTICLEAGGSEG 459 Query: 110 --------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + ++RA + + T V VGI AK+A AK + Sbjct: 460 KGVSEGSIYREQAKADEVAEQLRAAIKRETGCAVSVGIGGNILQAKVALRKAKPAGQFQL 519 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 + + LPV ++ G+G +S KL+ +G+K V D+ D + Sbjct: 520 ------KPDAVLDFIGELPVQNLPGVGYSLSAKLEDLGVKIVKDIRDLSREKLSSSLGPK 573 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG ++ ++ + ++G R + S +L Sbjct: 574 TGAKLADYARGIDRTEVGNEVT-RKSVSAEVNWGIRFVTQDQAEDFMRSLCEELHRRLVE 632 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ + + + SV L T + + A L Sbjct: 633 NLMKGQQLTLKVMRRALDAPLEAVKHLGHGKCDVFNKSVILGIATNAADVLGKEAIAMLR 692 Query: 332 AIWQAGHRYQKAGVMLGDFFS--------QGVAQLNLFDDNAPRPGSEQLM--TVMDTLN 381 ++ + + GV + G Q F + ++ + ++D+ Sbjct: 693 SLAISPGDLRGLGVQMTKLEPLKSTSEKSDGSQQQLAFKASTAPKRAQPIDDPDLLDSPR 752 Query: 382 AKEGRG-TLYFAGQGIQ 397 G ++ Q Sbjct: 753 K--GESESIRHGPQLND 767 >UniRef50_B0S0R3 DNA polymerase IV n=4 Tax=Clostridiales RepID=B0S0R3_FINM2 Length = 347 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 86/361 (23%), Positives = 155/361 (42%), Gaps = 19/361 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 F D++AF+ASCE + P L P+VV + G + N EA+ G+ P F+ K Sbjct: 5 FLHFDLDAFFASCEILDNPKLKHVPMVVGGRSQRGIITTANYEARKYGLHSAMPIFQAKK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + +V + ++E Y S +V L S +++ SIDE D++ +R D + Sbjct: 65 IVP--NLVIVAPDFEKYRRNSEKVFKVLSSFSNKIQKMSIDEGCMDISHIR--MDRLELA 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 I+ V +T L++ +GI+ +LAKLA+ K + + + ++ L Sbjct: 121 NLIQENVRIKTGLSISIGISYNMSLAKLASDWNKPHGIK------IITQDDIPNILLDLK 174 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V + GIGR+ +KL+ +GIK V DL D +R+ F E +RG QL + Sbjct: 175 VGKIQGIGRKSEEKLNKIGIKKVSDLYDLSRNNLRELFGKFGEVIYDRIRGIDERQL-DL 233 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + ++ I +F + +Y + ++ ++ L ++ + I IK + F++ Sbjct: 234 SRIRKSIGVEYTFERDLKNYNELLNKASEFSEELSDDLHKKNIKAKTIRIKIKLNDFSV- 292 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S+ L DS DI + + + G+ + QL Sbjct: 293 -----ITKSMTLEEYISDSSDIFRIVKYLV-VNTKIEKSVRLFGITAANLSDTTFEQLKF 346 Query: 361 F 361 Sbjct: 347 L 347 >UniRef50_B1ZN03 DNA polymerase IV n=2 Tax=Opitutaceae RepID=DPO4_OPITP Length = 392 Score = 344 bits (884), Expect = 3e-93, Method: Composition-based stats. Identities = 78/401 (19%), Positives = 145/401 (36%), Gaps = 20/401 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+ SCE +P+L G V G + + + EA+A GV P + + Sbjct: 6 IVHLDADAFFVSCELALKPELRGTKCAVGGRERGIISSASYEARACGVYTPMPTTRALKV 65 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT--GVRNCRDLTDF 119 ++ LY+ +S ++ E L+P V+ SIDE + DL G + ++ Sbjct: 66 CP--DLIMLPHTGGLYSRVSRQMFELCETLTPLVQRNSIDEGYLDLGPCGFKTSAEIEQA 123 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++ + Q+ +T G+A K +A++A+ K + + + ++ L Sbjct: 124 VHGLQHKIEQQLQITASFGLAVNKLVAQIASKLRKPKG------FVVVPSGTEAEFLAPL 177 Query: 180 PVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ + G+G + ++L GIK V DL + F G +E Sbjct: 178 PIGKLPGVGPKTEERLVGRHGIKLVRDLLARGEAELEAIFGDGWREMRDGALGIDDRPVE 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + +F E I + + + + K+R + + R ++ ++ F+ Sbjct: 238 TEHEDAKSYSQQETFDEDIASFAEIERVVKRMIDELLPKIREDGKRVRTMTVKVRYPDFS 297 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 S L T T L W + V QL Sbjct: 298 QE------SHGRSLSAGTDLEAPFYPLVTPLLRQAWTKKRPLRLVSVRFSG-VEDTPVQL 350 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +F N +L V+D LN + G + Q ++ Sbjct: 351 EMFAQNE--EKRRRLAAVLDHLNRRGGDAVVQHGHQLAKRP 389 >UniRef50_Q03X78 Nucleotidyltransferase/DNA polymerase for DNA repair n=19 Tax=Lactobacillales RepID=Q03X78_LEUMM Length = 440 Score = 344 bits (884), Expect = 3e-93, Method: Composition-based stats. Identities = 103/419 (24%), Positives = 163/419 (38%), Gaps = 19/419 (4%) Query: 1 MFALCDVNAFYASCETVFRPD--LWGKPVVVLS----NNDGCVIARNAEAKA-LGVKMGD 53 +F L D +FYAS E V R L G +VV+S N G V+A + AK LG+ Sbjct: 18 VFFLIDSKSFYASVENVERGFNPLKGD-LVVMSEQANTNGGLVLAASPTAKKDLGISNVM 76 Query: 54 PWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV--EIYSIDEAFCDLTGVR 111 +Q+DL G+ Y + ++ + + + + YSIDE+ D+T Sbjct: 77 ---RQRDLPDVHGLFIAHPRMNNYIAENLKINNIYRQYTDDINLLPYSIDESILDVTHSW 133 Query: 112 NCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + +I+ V T + + VGI T LAK+A K R GV Sbjct: 134 RLFGKTPEEVAFKIQKQVRAETGVYLTVGIGDTPVLAKIALDIEAKHTRNLMGV--WHYE 191 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 + KL +DDVW IG R + KL+ MGI ++ DLA D R +V E+ Sbjct: 192 DVPTKLWPITKLDDVWSIGSRTAHKLEVMGIHSMYDLAHQDPYQYRAKMGLVGEQLFALS 251 Query: 230 RGEPCLQLEEFA-PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G + E P + S+ + + A + A ++RS + + Sbjct: 252 WGIDRTDMAEVVVPKSKSYSNSQVLPRDYKRKEEIEIVVREMADQVATRIRSHKKQTCLV 311 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 S FI S + + PT D+R ++ + W G + G+ G Sbjct: 312 SLFIGYSFAESERQGSHGFRKQQRIDPTNDTRKLMAIMVALFERHWH-GEVIRNIGIDYG 370 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QL+LF+ ++ V+D + + G L A + + RA L Sbjct: 371 GLIEDTGVQLDLFEQPEKSIKFNKIDQVVDEIRKRFGTTALMRAMSKEKGGTAINRASL 429 >UniRef50_Q2SS65 ImpB/MucB/SamB family protein n=3 Tax=Mycoplasma mycoides group RepID=Q2SS65_MYCCT Length = 408 Score = 344 bits (884), Expect = 4e-93, Method: Composition-based stats. Identities = 77/410 (18%), Positives = 164/410 (40%), Gaps = 20/410 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ASC + P+L KP+V+ ++ + + A + EA+ +K P FK K Sbjct: 6 IIHIDMDAFFASCMQLKHPELKNKPIVISNSFDKSIISAASYEARKYNIKAAMPLFKAKK 65 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L+ + ++ ++ +++S+++ ++ + ++EI SIDEA+ D++ + D+ Sbjct: 66 LYPK--IISIRADMNFISNISSQIWEFIKTNYTNKIEIASIDEAYLDVSDLILNIDVLQL 123 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + I+ + +LT +GI + AK++ K + L+ + + + + Sbjct: 124 AKNIQKDIYNHFNLTCSLGIGFNRFSAKMSTSLNKPNG------ITLTTITNFKHNIWPI 177 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P++ ++G+G K L+ IKT+ DLA I + N E G + Sbjct: 178 PINKMYGVGESSIKILNHTKIKTIKDLALLSDAQIYELLNKKGLVLKNEALGLGSDYINY 237 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT----S 295 + + I + I Y + I + + KL C+ I I+ Sbjct: 238 LSSEYKSISKETTLNTPIYQYDEIETIILNLSKFITNKLVKNQLLCKTIEIKIRYKIDEK 297 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + + L T D I N+A +++ GV + + Sbjct: 298 IFDKQKHLTSKHKQITLKNHTNDLEKIYNSAIDCFYNLYEQNKGILLIGVGVSKLIHKNQ 357 Query: 356 --AQLNLFDDNAPRPGSE----QLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 QL++ + ++ ++ +N K + ++ A + Sbjct: 358 NWVQLDINNQINIDKKQIDNALKIENMIFNINKKFKKPVIWKAKDLKKSS 407 >UniRef50_C5RD20 DNA-directed DNA polymerase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RD20_WEIPA Length = 372 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 74/355 (20%), Positives = 146/355 (41%), Gaps = 20/355 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYA E P+ P+++ + G V N A+ LGV Sbjct: 18 ILHIDMDAFYAQIEMRDNPEYKSIPLILANDPRKTGGRGVVATANYLARNLGVHSAMSAA 77 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRD 115 + L + V + N+ Y +S ++ + + +VE + DEA+ D+T + N + Sbjct: 78 EALKLAPQA--VFVTPNFSKYRGVSQQLHQIFKRYTNKVEPVAFDEAYLDVTENIPNINN 135 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 E++ + + LT VGI+ K LAKLA+ K + + N E R Sbjct: 136 AIQLAHELQQIIYEELELTSSVGISFNKFLAKLASEHNKPSG------LTIINPEDIRSF 189 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + LP++++ G+G + ++K+ ++GI+ DL DT + F +RG Sbjct: 190 LDTLPINEMRGVGAKTAEKMISLGIRNGKDLYDTPQNKLADEFGKSGYIFYERIRGVDDR 249 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + ++ + R++G + ++ + AA+ L + + + I+ + Sbjct: 250 PVV-WQRERKSMSKERTYGPFLDTEQAIMDELKDLAAKLTASLIKSQLHGKTLVLKIRDN 308 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 F + +L D +I +AA LD + H + G+ + + Sbjct: 309 EF-----QTATHRATRLDFFPNDEDEIYHAAQDILDELGGYHHAIRLLGLTMTNL 358 >UniRef50_B5Y6A2 DNA-directed DNA polymerase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6A2_COPPD Length = 390 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 92/406 (22%), Positives = 150/406 (36%), Gaps = 30/406 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL------SNNDGCVIARNAEAKALGVKMGDPW 55 D++AF+ASCE P L GKP+ V+ + A + EAK GVK G P Sbjct: 4 IMHVDMDAFFASCEQAINPKLKGKPIGVMADPYGRGKKRSVIAAASYEAKRKGVKAGMPP 63 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + +L ++ ++ Y + N+++ +S VE YSIDE F T D Sbjct: 64 KEAFNLCP--DLILVQAHPSFYGYVHNQMLKYARSISSEVENYSIDEFFM--TYYGK--D 117 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 G EIR V ++ +T VGIA K LAK+A K + + + Sbjct: 118 PDKVGEEIRRYVKKQFGITCSVGIAPGKILAKMATEEGKPDG------LTWWKPQAIPSV 171 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 LPV + GIG R L+ GI T+ DLA T I+ ++ E + +G Sbjct: 172 YKYLPVSAIPGIGSRREALLNKNGIYTLEDLALTPKPIIKNLMGILGEYYQKIAQGIDET 231 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 L + I S + + + L + + + F++ Sbjct: 232 PLITQESPLKSITRSVTLDASTLSPLVVEAVGRLLCDSLGKGLEEINSRAKELFIFLRYD 291 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + S +KL T D I + + + GV + D Sbjct: 292 DMSAE------STGMKLEFYTNDPDVIFHNFKMLNKELRPYKQGVRLVGVGMTDIR--QH 343 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 +LF P P L V++ + + G ++ A + + + Sbjct: 344 YTPSLFYQEKPNP----LKPVVEKIRQRYGYDSIIPANLLLAEPYT 385 >UniRef50_B5TTR9 RumB n=6 Tax=Bacteria RepID=B5TTR9_9BACT Length = 375 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 135/377 (35%), Positives = 206/377 (54%), Gaps = 7/377 (1%) Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL-SP-RVEIYSIDEAFCDLT 108 MG P F+ K+L + + SSNY LYA+MS R + L E +P EIYSIDE F DLT Sbjct: 1 MGVPLFQLKELVEQHNITVLSSNYALYAEMSRRFIKVLAEFVTPQEQEIYSIDECFLDLT 60 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 + DLT + I + + L +GI +TKT AK+ANH AKK GV +L + Sbjct: 61 AYASNYDLTAYAHLILDRLSRWLGLPACIGIGRTKTEAKMANHIAKKN-SYLKGVCNLVS 119 Query: 169 LER--QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 ++ L ++ V +VWGIGR+ +KKL+++ I TVLD IR F+VV+ RT+ Sbjct: 120 MDYCSIEGLYQSIEVSEVWGIGRKHTKKLNSLSINTVLDFVCASPLMIRDQFSVVMHRTL 179 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 EL+G C+++E+ K++II SRSFG+++ +++AI Y A +LRSE+ C Sbjct: 180 LELQGISCIEIEQSPKAKKQIIASRSFGQKVYSCEDLKEAITLYVQDAVSRLRSENLLCG 239 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 I +F++++PF +EP+Y S S L P+ +S + AT +D ++Q ++K GV+ Sbjct: 240 CIISFVQSNPFDTSEPFYNKSLSYALPDPSDNSLLLSKIATSMVDQLYQKNIGFKKCGVI 299 Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI-QQQWQMKRA 405 L + +LF D S +LM +D + K G+ + + + W M R Sbjct: 300 LTCLEPKATHIYDLFTDMNKIESSNKLMDSLDDIQNKFGKRKIGLGASMLPDRNWNMSRN 359 Query: 406 MLSPRYTTRSSDLLRVK 422 LSP Y + L+ VK Sbjct: 360 KLSPNYF-KWDQLMSVK 375 >UniRef50_A7HFE4 DNA-directed DNA polymerase n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HFE4_ANADF Length = 459 Score = 343 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 94/422 (22%), Positives = 154/422 (36%), Gaps = 53/422 (12%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+ S E + P L GKPVVV + G V A + E + LGVK G F+ Sbjct: 18 ICCLDLDTFFVSVERLLDPTLEGKPVVVGGKPGSRGVVTAASYEVRRLGVKSGMSLFEAG 77 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 + + +++Y + RV +P V + SIDE + D +G Sbjct: 78 KRAPNA--IYLPTRHDVYGTYAERVREIARRFAPTVRVASIDEMYLDFSGCERLYRSAGA 135 Query: 120 GRE------------------IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 RE + + L G+A +K +AK+A+ AK Sbjct: 136 ARENGAEDRAGDAIIEGAVLQLTTAIFDELGLPSSAGVATSKVVAKVASALAKPRG---- 191 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV 221 V L +R +++ LPV GIG KL A G +T+ +A+ + ++ F Sbjct: 192 --VMLVPAGVERAVLAPLPVRSFPGIGPVAEAKLHAAGYQTLGAVAEASLADLQTIFGAW 249 Query: 222 LERTVRELRGEPCLQLEEFAPTKQ----------EIICSRSFGERITDYPSMRQAICSYA 271 R ++G L P I R+F E +TD S+ +C Sbjct: 250 AASISRGVQGLGSGDLCRERPAFAEHDPEGETVGSISNERTFREDVTDPASIEAVLCGLC 309 Query: 272 ARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 R + R H R ++ ++ + F + + S T ++ Sbjct: 310 ERVCWRARRRHVKARTVTLKLRYADF------HTLTRSHT-TMATNSELELYPIVKEMFA 362 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 A + GV L QL LFD +E++ V+D + A+ G + Sbjct: 363 AARTRSLPIRLLGVQLSSLG--TFEQLPLFD------RNERVGAVVDGIRARFGFAAVSL 414 Query: 392 AG 393 A Sbjct: 415 AT 416 >UniRef50_B0TZS5 DNA polymerase IV n=14 Tax=Francisella RepID=DPO4_FRAP2 Length = 350 Score = 343 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 70/362 (19%), Positives = 139/362 (38%), Gaps = 23/362 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+A E P L KP V N G + N A+ GV+ P Sbjct: 7 IIHIDMDYFFAQVEEKANPSLKDKPFAVGGTNPKRGVISTCNYIAREYGVRSAMPTAIAM 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 ++ ++++ Y S + + +VE S+DEA+ D+T V+ ++ T Sbjct: 67 QKCP--NLILLNTDFAKYKATSAVIRDIFYSFTDKVEPLSLDEAYLDVTDVKEYKNSATL 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I+ + +T LT G+A K LAK+A+ K + + E+ + Sbjct: 125 IAQAIKQEIFNKTGLTGSAGVAPNKLLAKIASDINKPNG------LYVITPEQVDSFVKD 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV ++G+G+ +KL M ++T LDL + + F RG ++ Sbjct: 179 LPVKKLFGVGKVSQEKLKNMNVETCLDLQQLSLATLVDKFGKFGSSLYNYARGIDNREVN 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + ++ E + + + + + + ++ EH I +K + Sbjct: 239 PVR-IRKSVSVENTYLEDLKTLEACLEKLPNLYNKLTSRMTEEHYK-SIIGIVVKFTDTK 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 N+ S+ + T D + + N + + + G+ + QL Sbjct: 297 FNKT------SLTRVAKTLDKKVLKNLIIEL---HQKQNYHIRLIGIGI-KLGEIDDRQL 346 Query: 359 NL 360 +L Sbjct: 347 SL 348 >UniRef50_D1YPB9 Putative DNA polymerase IV n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YPB9_9FIRM Length = 510 Score = 343 bits (882), Expect = 6e-93, Method: Composition-based stats. Identities = 82/340 (24%), Positives = 144/340 (42%), Gaps = 18/340 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + P+ G PV+V ++ G V + EA+ GV P + K Sbjct: 5 IMHVDMDAFFASIEQLDHPEYKGHPVIVGGLSSRGVVATCSYEARKFGVHSAMPISRAKK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L + + Y ++SN++ S ++E +P +E SIDEAF +++G+ Sbjct: 65 LCPDG--IYVYPRMDRYKEVSNQIFSIMKEFTPYIEPLSIDEAFLEVSGMSTMYSGPKAL 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 GR I+ V ++T L + G+A K LAKLA+ K + + R+RK+++ L Sbjct: 123 GRAIKDRVFEQTGLIISAGLAPNKFLAKLASDLDKPDG------LVVIPYGRERKVLAPL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTD-IRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ +WG+G R K L A G + + + +R G +E Sbjct: 177 PIKRIWGVGPRTEKILKAGGFHLMRHIQSLPDESTLIPLVGNQAKRIWELANGIDDRPVE 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 Q I ++ E +T+ ++ +A R +++LR Y +S ++ F Sbjct: 237 TDR-KTQSIGAEETYEEDLTEGRAIELEFRYFANRLSKRLRRRSLYGHTVSIKVRYDDFT 295 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH 338 S +L TP+ A + + Q Sbjct: 296 ------TVSRQKRLDTPSDHEHVFFETALLLWNKLMQDKM 329 >UniRef50_C3PHE2 DNA polymerase IV n=10 Tax=Corynebacterineae RepID=C3PHE2_CORA7 Length = 492 Score = 343 bits (881), Expect = 8e-93, Method: Composition-based stats. Identities = 81/375 (21%), Positives = 147/375 (39%), Gaps = 21/375 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + RP L G+PV+V + G V + EA+A G P F+ + Sbjct: 16 VLHIDMDAFFASVEQLTRPTLRGRPVLVGGTSGRGVVAGASYEARAYGAHSAMPMFRAQQ 75 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 L V +Y+ S RV + + + +E SIDEAF + + ++ + Sbjct: 76 LV-GYRAVVVQPRRAVYSAASRRVFGIIAQHAGVIEQLSIDEAFMEPAALLGATPAEVRE 134 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + +R + T L +G K AK+A+ AK + ER ++L+ Sbjct: 135 WSENLRRVIRTETGLPSSIGAGAGKQSAKIASGEAKPDG------TFVVPQERFKELIHP 188 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQL 237 LPV +WG G +KL A+G++T+ LA + + VV + +G + Sbjct: 189 LPVGKLWGAGPVTQQKLAAIGVETIGQLAAMSRKEVEISLGGVVGVQLWELAQGIDERPV 248 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++I ++ + + A+ A A +L + + R ++ ++ + F Sbjct: 249 AP-RAIAKQISTEFTYPTDLRTAAEVDAALIRAAHGAHSRLLKDGRGARTVTVKLRMADF 307 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S S L T D + + A + + GV + Q Sbjct: 308 HIE------SRSATLSYATDDLKVLEAKALSL-ARYPEELGPIRLVGVSYSGL--EEARQ 358 Query: 358 LNLFDDNAPRPGSEQ 372 LF + + Sbjct: 359 DVLFPELDREIVRQA 373 >UniRef50_D0NDK9 DNA repair protein REV1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NDK9_PHYIN Length = 943 Score = 343 bits (880), Expect = 9e-93, Method: Composition-based stats. Identities = 75/369 (20%), Positives = 133/369 (36%), Gaps = 24/369 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D++ F+ + +P+L PV V + + + N A+A GV G Sbjct: 256 VILHVDMDCFFVAVAVRDKPELQDVPVAVAHSSNAGSSEISSCNYSARAKGVGAGMFMQT 315 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K+L ++ ++ +S ++ +P V+ S DEAF Sbjct: 316 AKELCPE--LIVLPYQFDDIQRVSFQIYDIFFSHTPYVQAVSCDEAFL---EFEKGTKGM 370 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + IR + ++T VG++ LAKL++ AK GV +S+ + ++ M Sbjct: 371 EKANAIRQEIFEQTGCPASVGVSFNILLAKLSSKKAKPD-----GVYAISDPSQAKEFML 425 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQ 236 L V D+ G G + KL+A+G++ L + + ER RG Sbjct: 426 QLKVRDLPGAGHMTAAKLEALGVEDARQLVSMTRTELVQSLGKAAGERLFNYARGVDMRP 485 Query: 237 LE-EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT- 294 L E ++ + +FG R + + + + +LR+ + ++ IK Sbjct: 486 LSMESNMMRKSVSAVVNFGIRFDKWEDATVFLMALGEELSHRLRNLKVRTKCLTLLIKKR 545 Query: 295 --------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 S F + S S L PT D I A L + + GV Sbjct: 546 AEGAPIEPSKFMGHGVCDNFSKSQILAQPTDDEVVIGKACIELLRQLNFPSEDLRGVGVQ 605 Query: 347 LGDFFSQGV 355 S Sbjct: 606 ATKLISDAP 614 >UniRef50_D2P394 DNA polymerase V n=7 Tax=Listeria RepID=D2P394_LISMO Length = 426 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 101/415 (24%), Positives = 170/415 (40%), Gaps = 18/415 (4%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAKA-LGVKMGDPWF 56 DV +F+AS E V R D +VV+SN D G V+A + + K +K G F Sbjct: 15 ILCVDVKSFFASVECVKRGLDPLQAFLVVMSNADRAGGLVLAASPQMKKVFRIKTGSRKF 74 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR 114 + + R +V +LY ++ + +YSIDEAF D+T + Sbjct: 75 EVPEDDPR--IVIAPPRMKLYLHVNELIQKIFLRYVSREDFHVYSIDEAFLDVTHSKKLF 132 Query: 115 DLTD-FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + ++I+A +L+ L V VGI LAKLA A K Q+ G+ + + Sbjct: 133 GSAEVIAKKIQADILKELRLYVTVGIGDNPLLAKLALDNAAKHQK--SGIAEWRYKDVPE 190 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + PV D WGIG+R + +L+ MGI ++ L+ +++K V+ E+ G Sbjct: 191 TVWKIRPVTDFWGIGKRTAFQLERMGIYSIYGLSQMPPSYLKKRLGVIGEQLYYHSHGID 250 Query: 234 CLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 +L E + P ++ S+ + D + I A +LR+ H I Sbjct: 251 YSRLSEKYKPIERSYGKSQILEKDYHDPNQIAIIIQEMVEEVAMRLRNHHVDTSVIHLSA 310 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 S ++ G S K+ T S++++ +Q + V Sbjct: 311 GYSRYST---RNGFSHQKKI-MATDSSKELVPYFLEMFWK-YQENDAVRSVAVSCAGIKR 365 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + QL++F+D +QL +D + + G L A I +KR+ L Sbjct: 366 KTSMQLSVFEDYTKTLQQQQLERTIDKIRDRYGFNALMHANSLIDGATGLKRSAL 420 >UniRef50_A2QTI4 Contig An09c0050, complete genome n=9 Tax=Eurotiomycetidae RepID=A2QTI4_ASPNC Length = 1165 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 77/397 (19%), Positives = 135/397 (34%), Gaps = 47/397 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D + F+A+ T+ RP+L GKPV V + + + N EA+A G+K G Sbjct: 374 IMHVDFDCFFAAVSTLKRPELQGKPVAVAHGTGSGSEIASCNYEARAHGIKNGMWMKGAL 433 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG---------- 109 + ++ Y + S + S + + V+ SIDEA D+T Sbjct: 434 QTCPE--LKVVPYDFPAYEEASRKFYSAILSVDGIVQSVSIDEALVDITTQCLEAGGSDG 491 Query: 110 --------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + E+RATV + T V VGI LAK+A AK + Sbjct: 492 RGISEGSLYREQARADEIADELRATVKKETGCAVSVGIGGNILLAKVALRKAKPAGQFQL 551 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 + + L V D+ G+G + KL+ +G+K V D+ D + Sbjct: 552 ------KPDAVLDFIGNLTVQDLPGVGYSLGTKLEDLGVKLVKDVRDLTRDRLTTSLGPK 605 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG ++ ++ + ++G R + + S +L Sbjct: 606 TGVKIWEYARGIDRTEVGNEVL-RKSVSAEVNWGIRFVNQTQAEDFVRSLCQELHRRLVE 664 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ + + + SV L T + + A L Sbjct: 665 NLVKGQQLTLKVMRRALDAPLEPVKHLGHGKCDVFNKSVVLGVATDAADILGKEAVAMLR 724 Query: 332 AIWQAGHRYQKAGVMLGDFF--------SQGVAQLNL 360 ++ + + GV + G QLN Sbjct: 725 SMNLSPGDLRGLGVQMTKLQHLQTSSPSKSGQRQLNF 761 >UniRef50_UPI00016E76F4 UPI00016E76F4 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E76F4 Length = 1200 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 76/439 (17%), Positives = 145/439 (33%), Gaps = 76/439 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S RPDL GKPV V SN Sbjct: 408 IFHVDMDCFFVSVAIRNRPDLKGKPVAVTSNRGAGKVLHRPGANPQLERHYYQWKQSHTK 467 Query: 37 ----------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVV 68 + + + EA+ GV+ G + K K L + Sbjct: 468 SGETPSQESPESNTSGAGQETAALSMAEIASCSYEARQAGVRNGMFFGKAKQLCPS--LQ 525 Query: 69 CFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLTDFGREIRAT 126 ++E Y +++ + TL + +E S DE D + + C + + IRA Sbjct: 526 AVPYDFEAYKEVALTMYETLAGYTHDIEALSCDELLIDSSALLAELCISPEELAKAIRAD 585 Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 + ++T VG+ LA+LA AK + E + LPV + G Sbjct: 586 IKEKTGCCASVGMGSNILLARLATRKAKPDGQHFL------RSEDVDDFIRDLPVTSLPG 639 Query: 187 IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQ 245 +G +S+KL AMG+++ DL + ++K F + R RG + + ++ Sbjct: 640 VGPVMSRKLVAMGVRSCGDLQQVSLSQLQKKFGPRTGQTLFRFCRGLDDRPVR-YEKERK 698 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT---------SP 296 + ++ R T + + + ++L+ R ++ + + Sbjct: 699 SVSADMNYNIRFTTVNEAECFLTNLSMEVQKRLQEAGLRGRRVTLKVMVRKVGAPQEPAK 758 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + + + +V L T I +A + A+ + G+ + Sbjct: 759 YGGHGICDNLARTVMLAQSTDHGEVIASAVIKLFHAMNLQVQDLRGVGIQVQ-LLDGNAH 817 Query: 357 QLNLFDDNAPRPGSEQLMT 375 Q ++ L Sbjct: 818 QDSV-GPRKRSIKEMLLDQ 835 >UniRef50_B3WC63 DNA-damage-inducible protein P n=8 Tax=Lactobacillus RepID=B3WC63_LACCB Length = 367 Score = 341 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 70/364 (19%), Positives = 141/364 (38%), Gaps = 19/364 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYAS E P L K +V+ + G V N A+ GV P Sbjct: 16 IIHLDMDAFYASIEMRDNPQLRSKALVIARDPRTTGGKGVVTTANYVARRYGVHSAMPAN 75 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + L R +V S ++ Y +S ++ + +++ +E + DEA+ D+T + Sbjct: 76 EALQLVPRSKLVFKSPDFPKYKAVSAQIHALFHQVTDLIEPVAFDEAYLDVTANKMFPST 135 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 ++ + Q T LT +GI+ K +AK A+ K R L E+ + Sbjct: 136 IALALWLQDQISQATQLTSSIGISYNKFIAKQASDYNKPVGR------TLVLPEQALLFL 189 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP+ G+G++ KL +G+ L + + F + + RG Sbjct: 190 DRLPIKQFRGVGKKTLPKLTDLGVTDGKSLRALSQDDLLRMFGKMGFVLYQHARGVDNRP 249 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + T + I R++G +TD +++ + + A L + + + + ++ Sbjct: 250 V--AVRTAKSIGKERTYGTPLTDAEAVQTQLHNLAGMVVTSLNQKAMHGKTVVLKVRDVD 307 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + + + + I +AA + ++ + + G+ + + Sbjct: 308 F------ITQTKRLTQDHYFEGEQAIFDAAWQLWGSVAMSNLAIRLLGITVTGLDPKQYE 361 Query: 357 QLNL 360 L+L Sbjct: 362 NLDL 365 >UniRef50_C0S277 DNA polymerase IV n=5 Tax=Onygenales RepID=C0S277_PARBP Length = 1161 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 66/410 (16%), Positives = 131/410 (31%), Gaps = 50/410 (12%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+L +PV + + + N A++ G+K G Sbjct: 368 IMHVDFDSFFAAVSIRKHPELADQPVAIAHGTGPGSEIASCNYPARSFGIKNGMWMKGAL 427 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG---------- 109 + + ++ Y + S + + V+ SIDEA D+T Sbjct: 428 QMCP--NLKVLPYDFAAYEEASRNFYEVILAIDGIVQSVSIDEALVDITNICLDAGGSDG 485 Query: 110 --------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + +++R +V ++T + VGI A++A AK + Sbjct: 486 IGISEGSIYREQAKADEIAQKLRDSVKEQTGCNISVGIGGNVLQARVALRKAKPAGQFQL 545 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 + + + L V D+ G+ + KL+ +G+ V D+ + + Sbjct: 546 ------KPDAVQDFIGELTVKDLPGVAHSLGGKLEELGVVFVKDIRELSKEKLTSSLGPK 599 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG ++ ++ + S+G R + + S +L Sbjct: 600 TGAKLWNYARGIDNTEVG-IQVPRKSVSAEISWGIRFVSQTQAEEFVQSLCDELHRRLVE 658 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ I + + SV L T S I A L Sbjct: 659 NLVKGKQLTMRIMKRSADAPLEPVKHLGHGKCDTFNKSVALGVATNASDIIGREAISILR 718 Query: 332 AIWQAGHRYQKAGVMLGDFFS----------QGVAQLNLFDDNAPRPGSE 371 + + GV + QL+ F ++P P E Sbjct: 719 GFKFSPGDLRGLGVQMTKLEPVKQSNVRKVESSQRQLS-FKPSSPSPKME 767 >UniRef50_UPI000180C22E PREDICTED: similar to polymerase (DNA directed), kappa n=1 Tax=Ciona intestinalis RepID=UPI000180C22E Length = 706 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 80/416 (19%), Positives = 141/416 (33%), Gaps = 56/416 (13%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E RP+L KP+ V + + N A+ GV+ P F K L Sbjct: 108 IIHIDMDAFYAAVEERDRPELKQKPMAVGGMD--MLSTSNYVARKYGVRAAMPGFIAKKL 165 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR------- 114 ++ +N++ Y ++S E S+DEAF D+T R Sbjct: 166 CP--NLIIVPTNFDKYREVSKETQEIFSEYDENFCGMSLDEAFLDITDHLQKRLIYDQEE 223 Query: 115 -----------------------------DLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + +EIR + Q+T LT GIA L Sbjct: 224 RTFHYHPTLAPTTTSEDTDDKKSSETFGFSAEEVAKEIRFRIQQKTLLTASAGIAPNTML 283 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD 205 AK+ + K + N + K + PV V GIG+ + L ++G++ D Sbjct: 284 AKIGSDLNKPNGQT----FFAPNRDEIMKFIKDFPVRKVNGIGKVTEQLLSSLGVQKCGD 339 Query: 206 LADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + + + R G LE ++ I R+F I++ + Sbjct: 340 IYEMRAELMLLFSATSCSFFFRMCLGCSSNILEP-DGERKSISTERTFST-ISNRDELFA 397 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 + A ++ ++ + ++ K F L+ + S + P + + I Sbjct: 398 KLDELCHSLAADMKKQNVQGKTLTLKTKNVDFQLH------TRSKTINVPMTNYQTIFPV 451 Query: 326 ATRSLDA---IWQAGHRYQKAGVMLGDFFS-QGVAQLNLFDDNAPRPGSEQLMTVM 377 A L + GV L + AQ ++ A + + Sbjct: 452 AQELLKQEILNANNKLSLRLMGVGLSKLETGTTSAQTSILKFFAGNTKPQSCDKTL 507 >UniRef50_B8GPZ5 DNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=B8GPZ5_THISH Length = 414 Score = 341 bits (875), Expect = 4e-92, Method: Composition-based stats. Identities = 92/404 (22%), Positives = 162/404 (40%), Gaps = 26/404 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-CVIARNAEAKALGVKMGDPWFKQKD 60 L D+NAF+AS E + P+L G+PV + + G C+I + EA+A GV+ G + + Sbjct: 9 IVLVDMNAFFASIEQLDHPELRGRPVGITNGQTGTCIITSSYEARAHGVRTGMRLKEARQ 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-F 119 L + + E YA +S +M+ LE ++P +E++S+DEAF D+T + + Sbjct: 69 LCPDILQI--PARPERYARVSTDIMTALESVTPDLEVFSVDEAFLDVTHCQRLLGPPEVI 126 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R ++ TV + + L VG++ KT AK A K + + ++ + Sbjct: 127 ARRVKDTVREASGLPCSVGMSGDKTTAKWAAKQHKPDG------LTVIPPWEAAARLAPV 180 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV ++ GI I L+ G+ T D+A + + + F + R +G +E Sbjct: 181 PVTELCGIAGGIGGYLEQRGVYTCGDMAQLPVSELARRFGNLGRRIWLMAQGRDPTPVET 240 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + + + + + A + +LR ++ Sbjct: 241 RIAPPRSLGHGKVMPPGTRERAVILTYLEHMAFKVGTRLRRHDLLALRFFIGLRAD---- 296 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-QGVAQL 358 Y + + T DSR + R L+ W +G + V + QL Sbjct: 297 ---YGWIGGTYRTAVATDDSRQLNALCRRMLNEHW-SGEGVSQ--VQITALEPCPAAGQL 350 Query: 359 NLFDD-----NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 LFD A + VMD +N + G TL A + Sbjct: 351 ELFDAGQAPGAADQARVRAAHGVMDAINRRYGEFTLAPARLLSR 394 >UniRef50_B3E013 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E013_METI4 Length = 365 Score = 339 bits (871), Expect = 1e-91, Method: Composition-based stats. Identities = 81/358 (22%), Positives = 149/358 (41%), Gaps = 21/358 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 +F D++AFY S E + P+ P+ V + N G ++ + EA+ GVK G P + Sbjct: 26 LFFFVDLDAFYVSVERLRHPEYREMPMAVYTGSLNGRGVIMTASYEARKYGVKSGMPIRQ 85 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 G++ +++ LY + SN V S L+ S R+E SIDE + D Sbjct: 86 ALYHCP--GIMLVAAHPSLYEEYSNSVYSLLKRFSERIERVSIDENCLVVPSSI---DPE 140 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 I+A + + L +G+ K +AK+A AK + + ++ ++ Sbjct: 141 TTATAIQAAIGAKIGLPSSIGVGSNKLIAKMACDLAKPQGIR------VIPPGYEKAFLA 194 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV+ + G+G K AMGI T+ DL+ D + +R+ F +G L Sbjct: 195 PLPVEKIPGVGPATLKIFHAMGIVTIDDLSKVDEQTLREKFGKRGAYFYNAAQGIDKSPL 254 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + + +F I ++ +++ + S + A+ LR E + + ++ S F Sbjct: 255 QLERTPR-SLSREITFDRDIKNFSILQRVLVSLSRDLADSLRKEKLVAKTVFLKLRYSDF 313 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + N L +PT D +I L + + G+ L + ++ Sbjct: 314 STNL------RQFSLSSPTDDPTEIATCGLLLLKRNIKKEKALRLIGLGLRNLTAKTG 365 >UniRef50_C1A9Y5 DNA polymerase IV n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Y5_GEMAT Length = 441 Score = 338 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 83/424 (19%), Positives = 153/424 (36%), Gaps = 42/424 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKP--VVVLS--NNDGCVIARNAEAKALGVKMGDPWFK 57 L D +AF+ + P+ GK ++V + G V + + E +A GV+ P + Sbjct: 12 ILLVDADAFFVAVARQEDPEGAGKATLLIVGGRPGSRGVVCSASYECRAYGVRSAMPISR 71 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-- 115 L + V + S + + L + +P V+ SIDE +CDL G Sbjct: 72 ALKLCPQAMCVPVP--RHVCGTRSREIQAVLAQFAPVVQPSSIDEWYCDLGGTEALYGHE 129 Query: 116 -LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 L + R +R V T L V +G ++ +AK+A AK V + + Sbjct: 130 PLEETARRMREAVFAATGLRVSIGGGTSRLVAKMAVEVAKPKPGTGATGVRCVPPGTEAE 189 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEP 233 +S + D+ +G R + KL+ MG++T+ + + R +RG+ Sbjct: 190 FLSRFKLADLPMVGPRFATKLERMGLETIAQAQQWTEDTLVHRLGDRAGQWLSRRIRGQD 249 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + +++ +FG + + + + + A R + LR + R I+ ++ Sbjct: 250 ESIVRPRDRQ-KQVSRETTFGRNLHEDDVVERELLRLAVRVSADLRRQALRARTITVKLR 308 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDFFS 352 F SA L + ++ AA L + + + G+ L F Sbjct: 309 DGDFR------TRSAQRTLSGFIESEHSVVRAAKPLLRQMRKTRRAPVRLLGIALSHFED 362 Query: 353 QG----VAQLNLF--------------------DDNAPRPGSEQLMTVMDTLNAKEGRGT 388 QL LF D+ P L+ +D + + G Sbjct: 363 DEEPRPAVQLGLFPSAFKGPGASPPDADGSALSDEPTETPRDRALVQALDRIRGRFGADA 422 Query: 389 LYFA 392 + A Sbjct: 423 IIPA 426 >UniRef50_A0YE03 DNA polymerase IV n=2 Tax=Gammaproteobacteria RepID=A0YE03_9GAMM Length = 388 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 84/376 (22%), Positives = 150/376 (39%), Gaps = 32/376 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 CD + F+ + E P L+G+PV V + G + N EA+A GV + Sbjct: 31 IIHCDADCFFVAVEMRDDPSLFGRPVAVGGSADRRGVISTCNYEARAYGVGSAMATATAR 90 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L ++ S N E Y ++++ + E S VE S+DEA+ D+TG C T Sbjct: 91 RLCP--DLIVLSGNMEKYKLAASQMRTIFCEYSTLVEPLSLDEAYIDVTGSDACHGSATL 148 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EIR V + +T+ G+A K LAK+ + K + + R + A Sbjct: 149 IAEEIRQRVKESVGITLSAGVAPNKFLAKIGSDWNKPNG------LCVIPPARVDAFVQA 202 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 +PVD ++G+G+ +++L MGI+T DL I + + F R RG ++ Sbjct: 203 MPVDRLFGVGKVTAERLHRMGIQTCGDLRAFSIFQLSERFGSFGSRLYDLSRGIDDRAVK 262 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH-------QYCRFISTF 291 ++ + +F ++ S + + + +L++ + Sbjct: 263 TGR-IRKSLSVEHTFPSDLSAIDSCLEQLPDLFDQLTTRLQTLNDQSKGAAYRVNKQFIK 321 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQK--AGVMLG 348 IK + F + + ++ I R ++I + G + GV Sbjct: 322 IKFNNFQSTTMECIVAGAPRIA--------IFRELCR--ESILRGDGLAVRLMGLGVRFQ 371 Query: 349 DFFSQGVAQLNLFDDN 364 D G QL+LF++ Sbjct: 372 DPACDGAVQLSLFENA 387 >UniRef50_A4VCZ3 DNA polymerase IV / kappa n=1 Tax=Tetrahymena thermophila SB210 RepID=A4VCZ3_TETTH Length = 950 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 79/362 (21%), Positives = 139/362 (38%), Gaps = 24/362 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++ FY +CE RP L PV V + N A+ GV+ P F K Sbjct: 105 IWVHFDMDMFYVACELKDRPQLKDLPVAVGGM--SMISTANYVARKFGVRSAMPGFIAKK 162 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--- 117 L + ++ N+E Y S++ L + P +E +DEA D+T ++ Sbjct: 163 LCPQ--LILIPCNFEKYRKASDQFKKVLYQYDPNLESMGLDEANLDITDYLQQNNINSDA 220 Query: 118 ---DFGREIRATVLQRTH-LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 D IR V + T LT GI K LAK+ + K + +++ E+ + Sbjct: 221 QIYDLCHSIRNQVFESTGGLTCSCGIGPNKMLAKICSDMNKPNGQFQL----INDEEKIK 276 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 M LP+ + GIG + L +GI+ + + I ++ + V G Sbjct: 277 DFMKDLPIRKIPGIGNVTEQILKGIGIEKCSQILERVIDIKICFKDLSFDHLVSSALGIG 336 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 E K+ + SR+F + I+ + + I + AE ++E + + ++ K Sbjct: 337 -RSWHEEETEKKSLSVSRTF-QAISTIEEINEKIHQISQLLAEDAKAEQKIGKHLAVSFK 394 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 F + S + L QDS I A + + + G+ L + Sbjct: 395 NVKFQM------RSKNRMLDKYIQDSEQIEKVAKELVKEL-LPTEPLRLIGIRLSQLADE 447 Query: 354 GV 355 Sbjct: 448 NE 449 >UniRef50_D2LRT2 DNA-directed DNA polymerase n=3 Tax=Bacillus RepID=D2LRT2_BACS4 Length = 424 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 91/416 (21%), Positives = 163/416 (39%), Gaps = 20/416 (4%) Query: 2 FALCDVNAFYASCETV---FRPDLWGKPVVVLSNND--GCVIARNAEAKA-LGVKMGDPW 55 D+ +FYASC + P L VV ++A K G+K G+ Sbjct: 13 ILCIDMKSFYASCAAIALGEDP-LTSHLAVVGDTAREGSVILAATPALKRDFGIKTGNRL 71 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLTGVRN- 112 F+ + +++ Y +S +V + ++ P + YS+DE+F D+ G Sbjct: 72 FEVPK---DSKIKLVNASMATYLSISVQVTALFQQYVPPEAIHTYSVDESFLDICGTEKI 128 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + + +IR + +R L+ +GI ++K+ K Q G+ + + + Sbjct: 129 WGNDRELALKIRDDLFKRFGLSCAIGIGPNMLMSKVCLDIEAKNQP--SGIAKWTYADVK 186 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 KL P+ +WGIG +I +L +GI ++ LA+ + + K F V+ + G Sbjct: 187 TKLWQISPLQKMWGIGSKIEARLHRLGIFSIGHLANYRLDKLEKVFGVMGNQLYYHAWGI 246 Query: 233 PCLQLEEFAPTKQ-EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 ++ Q S+ TD +++ I A + R E++ + IS Sbjct: 247 DFSEVGAPILNGQISYGKSQILMRDYTDKLEIKRVILEMCEEVAARARRENKAGQTISLG 306 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 I S G + ++ PT + ++ A + D + G ++ + L + Sbjct: 307 IGYSK---VARERGFHRQLTVVEPTNITMELYEACLKIFDKHYN-GSIVRQVSISLANIC 362 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 V QLNLFD + RP L VMD + K G + A R L Sbjct: 363 GDDVIQLNLFDQDQLRPKKRDLGYVMDAIRKKHGPNAVLRAVSYANGGTARHRNTL 418 >UniRef50_B6J224 DNA polymerase IV n=5 Tax=Coxiella burnetii RepID=B6J224_COXB2 Length = 372 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 70/351 (19%), Positives = 132/351 (37%), Gaps = 24/351 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FY + E P L KPV V ++ G + N A+ GV+ K Sbjct: 27 IIHVDMDCFYVAIEMRDNPKLREKPVAVGGAAHSRGVICTANYIARGYGVQSAISSSYAK 86 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTD 118 L ++ N E Y + +++ +E + VE S+DEA+ D++ + + T Sbjct: 87 KLCPS--LIILPVNMEKYRAIGHQIRGLFQEYTHLVEPLSLDEAYLDVSDCKIHQGSATR 144 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +EIR +++R LT G+A K LAK+A+ K + + + + Sbjct: 145 IAQEIREQIVKRHSLTASAGVASNKLLAKVASAWNKPNGIK------VILPSKADDFVKT 198 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++ + G+G+ ++K+ AM I T DL + K F RG +E Sbjct: 199 LPIEKIHGVGKITAQKMKAMNIHTCSDLQALSREALSKSFGSFGVTLYELCRGIDPRSVE 258 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE-HQYCRFISTFIKTSPF 297 ++ + +F + I + + ++L + R IK + F Sbjct: 259 PNR-IRKSVSVEHTFSQDIATLSECEIELANLFNDLKQRLLKHTDRCIRKQFVKIKFNDF 317 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + + ++ L D+ + + GV + Sbjct: 318 KI-TKAETITQTISL--------DLFKHL--LYQIFERQQKPVRLLGVGVS 357 >UniRef50_Q3II35 DNA polymerase IV n=3 Tax=Alteromonadales RepID=DPO4_PSEHT Length = 351 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 73/368 (19%), Positives = 144/368 (39%), Gaps = 28/368 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 F D++ FYA+ E P L P+ + N G + N A+ GV+ + K Sbjct: 4 FIHIDMDCFYAAVEMRDNPKLANVPLAIGGNSRRGVLSTANYIAREYGVRSAMSNYHAKQ 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDF 119 L +V +Y D+S ++ + + +E S+DEA+ D+T C T Sbjct: 64 LCP--DLVIVPGRMAVYKDVSTQIRAVFSRYTDLIEPLSLDEAYLDVTHSEQCKGSATLI 121 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++IRA + T LT GIA K +AK+A+ K + + ++ ++ L Sbjct: 122 AQQIRADIYNATGLTASAGIAPIKFIAKIASDENKPNGQF------VVLPDQVDAFLAQL 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G+ +KL+ G+ T D+ + ++++H ++ GE ++ Sbjct: 176 PLGKIPGVGKVTLEKLNLKGLYTGQDVRKKGVNWMQQHVGNFGVSLYQKCAGEHIGRVST 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ--YCRFISTFIKTSPF 297 ++ + ++ + + S +L + +S +K + F Sbjct: 236 ER-VRKSLSVEHTYEYNKNSLQECLEQLPSLLEELTTRLNKQQLQNQVNKLSVKVKFANF 294 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG--HRYQKAGVMLG-DFFSQG 354 + + Q + DI + L +Q G + G+ +G Q Sbjct: 295 VVTSADQAHQ---------QLNSDIFSE---LLAKAYQRGLQQPVRLLGIGVGIKNQPQH 342 Query: 355 VAQLNLFD 362 QL++ D Sbjct: 343 NLQLSILD 350 >UniRef50_Q6F1D8 DNA polymerase IV (PolIV) n=1 Tax=Mesoplasma florum RepID=Q6F1D8_MESFL Length = 370 Score = 337 bits (866), Expect = 4e-91, Method: Composition-based stats. Identities = 80/369 (21%), Positives = 160/369 (43%), Gaps = 17/369 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AF+ASCE L KPVVV NN ++A + +A+ G+K G P F+ K Sbjct: 5 VILHLDMDAFFASCEQAHDKTLKNKPVVVARNNDRSIIVAASYDARKYGIKAGTPIFEAK 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTL-EELSPRVEIYSIDEAFCDLTGV-RNCRDLT 117 L ++ N +LY + S R+ + + E+ + +VE+ IDE F D T + ++ Sbjct: 65 QLA-YGELIIKEGNRDLYEEYSERIFNLIKEQFTYKVEVLGIDECFIDATNIWEKYGNVQ 123 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + I+A V Q T LT +G + T+ +K+ + K + + E + L+ Sbjct: 124 NLCLAIQAAVYQETGLTCSIGASFTRLFSKMGSDMKKPNG------ITIITKENFKTLIW 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 + DV G+G +K++ + +KTV D D + I F + ++ ++L G ++ Sbjct: 178 NKSIKDVIGVGSSSLEKMELLNVKTVNDFVKLDEKIIADSFGLSGQKMYQKLHGIKNDEI 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS-- 295 + + + I ++F ++ + + + + A + +++ + + ++ IK Sbjct: 238 AYWETSVKSISKEKTFDKKNMAIEDIEEILFNLAEKVVLRMQKNNILAKTVTLSIKFYNQ 297 Query: 296 --PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 F E + S T + + LD I+ G G+ + + + Sbjct: 298 EINFDKKEQKKRRTYSETFNEYTDSLEKLYSRVKVILDDIYD-GESISLIGIGVTNLIEK 356 Query: 354 GV--AQLNL 360 Q + Sbjct: 357 DKLVKQQSF 365 >UniRef50_Q46L62 DNA-directed DNA polymerase n=2 Tax=Prochlorococcus marinus RepID=Q46L62_PROMT Length = 425 Score = 337 bits (865), Expect = 5e-91, Method: Composition-based stats. Identities = 146/423 (34%), Positives = 232/423 (54%), Gaps = 6/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D N FYASCE + P + GK +VVLSNNDGC+IAR++EA+ +G+ MG P+FK K+ Sbjct: 4 VILQIDGNNFYASCEQMIDPSIKGKGLVVLSNNDGCIIARSSEARRMGIPMGQPYFKLKN 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + + SSNYELY D+SNR+M L + +EIYSIDEAF + + + L +G Sbjct: 64 KLNQLNINVRSSNYELYGDISNRLMQLLRKNCEELEIYSIDEAFGTIKRPKE-KCLYKWG 122 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +++RA V Q + + +GI +TK L+K++NH AKK + G+ D+ +E + + + Sbjct: 123 KDLRALVYQNIGIPISIGIGETKVLSKISNHLAKKI-QTNSGIFDIGRVENKDHYLDLIN 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 VD VWGIG+R+SK L GI +L D I+ + VV R EL+G C+ ++E Sbjct: 182 VDKVWGIGKRMSKWLKDRGITNARELRDMSSDQIKGKYGVVGLRIQNELKGNLCIPIKEN 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + ++EI SRSF I + QAI Y A+ KLR +Q I+ F T+ + + Sbjct: 242 SSDRKEICVSRSFAHPIDSLDDLSQAIIKYVLIASAKLRKYNQLSSAITVFTNTNTHSKD 301 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 ++ + A+ K+ PT +S+ +I + I++ + KAGV+L S Q + Sbjct: 302 --FFRSEATEKISVPTSNSKIMIEKSLSLTKEIFKPYKNFIKAGVILHKLQSNQYKQNLI 359 Query: 361 FDDNAPRPG--SEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 FD + ++L V+D +N+K G T+ + + +W +R LS TT ++ Sbjct: 360 FDAQNIKEELYLQRLDNVIDNINSKNGIDTINWGSSMMDTEWSPRRKNLSSIKTTNIENI 419 Query: 419 LRV 421 + Sbjct: 420 PTI 422 >UniRef50_B2A4V8 DNA-directed DNA polymerase n=5 Tax=Clostridia RepID=B2A4V8_NATTJ Length = 421 Score = 337 bits (865), Expect = 5e-91, Method: Composition-based stats. Identities = 104/403 (25%), Positives = 164/403 (40%), Gaps = 26/403 (6%) Query: 1 MFALCDVNAFYASCETVFRP------DLWGKPVVVLSN---NDGCVIARNAEAK-ALGVK 50 + DVN+ Y S E +R DL P VV + G V+A++ AK ++ Sbjct: 5 IIFHIDVNSAYLSWEAAYRLQKGAQLDLRQVPSVVGGDSQKRRGIVLAKSIPAKSKFKIQ 64 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+ + + NY+LY SN ++ L E SP ++ YS+DE F D T + Sbjct: 65 TGELLSSARKKCP--DLFVVPPNYDLYLRCSNAMVELLYEYSPFIQRYSVDEVFLDFTNM 122 Query: 111 -RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + D I+A V + TV +GI K LAKLA+ K + V L Sbjct: 123 EKQFGDYLTAANTIKARVKEELGFTVNIGIGPNKLLAKLASEFKKPDR-----VHTLFPE 177 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 E K + LPV +++ +GR KKL GI T+ +LA T ++ Sbjct: 178 EIPTK-LWPLPVGELFMVGRATEKKLLDRGITTIGELAKTPRNKLKLWLKSHGLLIWDFA 236 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G + + + S + E + D + R + S + + +LR H Y + ++ Sbjct: 237 NGIEESSVRPEGFPMKGLGNSTTTPENVADKETARLWLLSLTEKVSSRLRDAHCYAQVVN 296 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 IKTS F KLL PT ++ I + L+ +W + G+ L Sbjct: 297 LSIKTSQF------ISYGKQKKLLNPTNSTKVIFETGKKLLNELWDEEEPLRHIGISLSS 350 Query: 350 FFSQGVAQLNLFDDNAPRPG-SEQLMTVMDTLNAKEGRGTLYF 391 S QL++FD + E +D + AK G +L Sbjct: 351 LSSSKSYQLSMFDKLSIDTDSEESFYKAIDKIRAKHGETSLIR 393 >UniRef50_B2VS10 DNA polymerase IV n=3 Tax=Pleosporineae RepID=B2VS10_PYRTR Length = 878 Score = 337 bits (864), Expect = 7e-91, Method: Composition-based stats. Identities = 69/380 (18%), Positives = 125/380 (32%), Gaps = 39/380 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+ KP VV + + N A+ GVK G + + Sbjct: 390 ILHVDFDSFFAAVSLKKHPEYKDKPAVVAHGQGSGSEIASCNYPARTYGVKNGMWMKRAQ 449 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG---------- 109 +L + ++ Y + S + V+ SIDEA D++ Sbjct: 450 ELCP--DLKILPYDFPAYEETSRAFYDVILSTGGLVQSVSIDEALVDVSNLCISVGGSDG 507 Query: 110 --------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + +R V RT V VGI LAK+ AK + Sbjct: 508 KAHSEGSVYREQAKANEIALNLRDEVRSRTGCNVSVGIGGNILLAKVGLRRAKPAGQYQ- 566 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 E + L V D+ G+ I KL+ +GIK V D+ + + + Sbjct: 567 -----IKPEEALDFIGQLQVQDLPGVAWSIGGKLEGLGIKLVKDIRELTKEKLIQTLGPK 621 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 E+ RG ++ E ++ + ++G R + + I S ++LR Sbjct: 622 TGEKLYEYSRGIDRQEVGEQV-VRKSVSAEVNWGVRFENQEQADEFIASLCGELQKRLRK 680 Query: 281 EHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 E + + + S + ++ S+ L T S + A + Sbjct: 681 EKVKGKQFTMKVMRRSPDAPLDPSKHLGHGKCDTHNKSILLGVATNSSEVLTKEALAIVR 740 Query: 332 AIWQAGHRYQKAGVMLGDFF 351 + G+ + Sbjct: 741 GFAFTPGELRGIGIQMTKLE 760 >UniRef50_B9X9L4 DNA-directed DNA polymerase n=3 Tax=Verrucomicrobia RepID=B9X9L4_9BACT Length = 368 Score = 337 bits (864), Expect = 7e-91, Method: Composition-based stats. Identities = 79/341 (23%), Positives = 131/341 (38%), Gaps = 25/341 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AFYAS E P+L GKP++V G V A + EA+ GV+ P Sbjct: 4 VIFHLDMDAFYASVEQRDNPELRGKPLIVGAPPTQRGVVCAASYEARKFGVRSAMPSVVA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--- 115 K L + Y SN++M + +E SIDEA+ DL+ V D Sbjct: 64 KRLCPDG--FFIRPRMDHYRAESNQIMQIVAASGAIIEQVSIDEAYLDLSPVCQRSDLDS 121 Query: 116 ----LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 +++ + LT +GIA K LAK+A+ K + L Sbjct: 122 SLLSAVPLAAQLKDKIFSERGLTTSIGIASNKLLAKIASDFNKPNG------LTLIPERD 175 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + +P+ + G+GR + L G++T+ DL D +R R G Sbjct: 176 KVLFLRPMPIRAIPGVGRVTEEMLKKSGVETIGDLQDFPGD-LRSMVGSFGPTLKRFSFG 234 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 E QL+ + I +F + D ++ + A A KL+ + + I Sbjct: 235 EDNRQLDTGDVI-KSISSENTFLKDTEDRKILKTCLREQAEEIAAKLKRKQIGAQTIQVK 293 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 ++ S F + + + P ++ DI L Sbjct: 294 LRYSDFT------TLTRQLSVEEPITEAADIYRLGCYLLAR 328 >UniRef50_Q8TIW3 DNA polymerase IV n=4 Tax=Methanosarcinaceae RepID=DPO4_METAC Length = 366 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 97/378 (25%), Positives = 153/378 (40%), Gaps = 33/378 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D++ FYA+ E +P+L GK VVV S G V N A+ G++ G P Sbjct: 5 VIIHVDMDYFYAAIEEREKPELLGKAVVVCMLSGRSELSGSVSTCNYIAREFGIRSGMPC 64 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR------VEIYSIDEAFCDLTG 109 + K L V E Y +S+R+M L + E S+DEAF ++T Sbjct: 65 SRAKKLNPEA--VFLPVRKEFYTSVSDRIMEILRSYADPGENGDSFEQISVDEAFLEIT- 121 Query: 110 VRNCRD---LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL 166 R D + G +I+ + ++ +LT +GI K +AK+A+ A K + + Sbjct: 122 YRAGGDFNLAFELGMQIKKEIKEKENLTCSIGIGPNKLIAKMASSAKKPDG------ITV 175 Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERT 225 + E Q + L V +WGIG +KKL M I TV DLA+ D+ + F Sbjct: 176 VSPENQEAFLWPLKVSKLWGIGDVTAKKLQEMDIVTVKDLAEHDVIELISTFGKSRGTWL 235 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 + G L+E ++I + E D + + A EKL S Sbjct: 236 KQAASGIDDSPLKE-REGSEQIGRIATLPEDTLDQELILSLLEKLAGDVIEKLDSRELSF 294 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAG 344 R ++ + S F + S L P ++ AA L +++ G Sbjct: 295 RVVTVTVINSNFR------TYTKSRTLNHPVSSKETLLEAAREILSEFLSESKTEFRRVG 348 Query: 345 VMLGDFFSQGVAQLNLFD 362 V +G + Q +LFD Sbjct: 349 VRVGGLQKKKG-QTSLFD 365 >UniRef50_Q1N612 DNA polymerase IV n=1 Tax=Bermanella marisrubri RepID=Q1N612_9GAMM Length = 366 Score = 335 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 75/370 (20%), Positives = 140/370 (37%), Gaps = 29/370 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D + F+A+ E P P+ + + G + N A+A GV+ P + Sbjct: 5 VLHVDCDCFFAAVEMRDSPQYRDIPLAIGGSSDRRGVISTCNYVARAYGVRSAMPSGQAL 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L ++ + E Y +S VMS +E E SIDEA+ +++ + Sbjct: 65 KLCPDLMLI--RGDMEKYRRVSREVMSIVESYGLAFEQVSIDEAYIEISPHSPGK---II 119 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++IR V +TV VGIA K LAK+A+ K + + + + + L Sbjct: 120 AQQIRQQVEAEIGITVSVGIAPNKYLAKVASDWNKPNGQF------VVEPQALNEFVRTL 173 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + G+G + ++KL MGI + D+ ++ + K F ++ RG L Sbjct: 174 PVGKIPGVGPKSAEKLANMGIHSCADVQAIELADLLKRFGQFGKKLYDRSRGIDDRTLSN 233 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS--TFIKTSPF 297 ++ + R+F I ++Q R ++ + R ++ +K + F Sbjct: 234 GR-ERKSLSVERTFANDIESEEELQQVAQDLWLRFQSRIEANAIRLRDVTPFVKVKFADF 292 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + + + ++I A R + + G+ Q + Q Sbjct: 293 QVTTL---ANHQKTVDL--DSFIELIQQARR------RQEKSIRLIGIGA-RL-KQNLTQ 339 Query: 358 LNLFDDNAPR 367 + LFD Sbjct: 340 MELFDQATAE 349 >UniRef50_A6UXE7 Ultraviolet light resistance protein B n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6UXE7_PSEA7 Length = 360 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 167/358 (46%), Positives = 224/358 (62%), Gaps = 5/358 (1%) Query: 64 RCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREI 123 G V + D+S RV+ L EL+PR+E+YSIDE+F DL G+ L +GR I Sbjct: 7 EHGPVLIDFLLHINGDVSARVVRVLRELAPRLEVYSIDESFLDLAGLGRP--LAGYGRHI 64 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 RA V + T + VGVGI+ TKTLAKLAN AAK+ + GVV + E+Q L+ P+ + Sbjct: 65 RAEVQRLTGMPVGVGISTTKTLAKLANWAAKRRSQ--SGVVVATRPEQQAALLKDAPLGE 122 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 VWG+GR++ L A+G+KT DLA D +RK F+VVLE+T+RELRGE C L+E Sbjct: 123 VWGVGRKLQAHLGALGVKTAWDLAQQDAWTMRKQFSVVLEKTIRELRGEACFALDEGPEP 182 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 KQ I CSRSF R+T+ +R+A+ SYA RAAEKLR++ C+ + +I+T F +EP Sbjct: 183 KQMITCSRSFSRRVTELAPLREAVASYACRAAEKLRAQGDVCQLLQVYIRTGVFNPDEPR 242 Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD 363 Y +ASV L TP+ DSRD++ AA L+ I++ G+RYQKAGVML + S G Q +LF Sbjct: 243 YARTASVPLHTPSNDSRDLVQAALAGLEGIYRPGYRYQKAGVMLMNLASPGQVQADLF-A 301 Query: 364 NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 APRP S LM +D +N GRGT+ A W MK+ + SP YT R +L RV Sbjct: 302 PAPRPRSAALMATVDRINTNMGRGTVRLARVPALGGWSMKQELRSPGYTCRWDELPRV 359 >UniRef50_Q9UBZ9 DNA repair protein REV1 n=27 Tax=Tetrapoda RepID=REV1_HUMAN Length = 1251 Score = 335 bits (859), Expect = 3e-90, Method: Composition-based stats. Identities = 69/419 (16%), Positives = 134/419 (31%), Gaps = 75/419 (17%) Query: 2 FALCDVNAFYASCETVFRPD------------------------------------LWGK 25 D++ F+ S RPD L GK Sbjct: 419 IMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTGRAPLRPGANPQLEWQYYQNKILKGK 478 Query: 26 PVVVLSNN------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 + ++ + + + EA+ LG+K G + K L + Sbjct: 479 AADIPDSSLWENPDSAQANGIDSVLSRAEIASCSYEARQLGIKNGMFFGHAKQLCP--NL 536 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRA 125 ++ Y +++ + TL + +E S DEA D+T + +F +R Sbjct: 537 QAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAETKLTPDEFANAVRM 596 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + +T VGI LA++A AK + E + V ++ Sbjct: 597 EIKDQTKCAASVGIGSNILLARMATRKAKPDGQYHL------KPEEVDDFIRGQLVTNLP 650 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTK 244 G+G + KL ++GIKT DL + ++K F + R RG + + Sbjct: 651 GVGHSMESKLASLGIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRTEK-ER 709 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TS 295 + + ++G R T + S + +L + + ++ I T+ Sbjct: 710 KSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEATGMKGKRLTLKIMVRKPGAPVETA 769 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 F + + +V L T +++ I A + + G+ + Sbjct: 770 KFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMFHTMKLNISDMRGVGIHVNQLVPTN 828 >UniRef50_Q2HFL9 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2HFL9_CHAGB Length = 1141 Score = 334 bits (858), Expect = 3e-90, Method: Composition-based stats. Identities = 78/416 (18%), Positives = 143/416 (34%), Gaps = 47/416 (11%) Query: 2 FALCDVNAFYASCETVFR-PDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 D ++F+ + PD KP VV + + + N A+ GVK G + Sbjct: 313 IMHVDFDSFFCAVSLNRHAPDHRDKPTVVAHSTGSGSEIASCNYPARKFGVKNGMWMKRA 372 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-------- 110 ++L+ + ++ Y + S + ++ V+ SIDEA D+T + Sbjct: 373 QELYP--DIKVVPYDFPAYEEASKLFYDAILDVGGVVQSVSIDEALVDITDIILSAAGSS 430 Query: 111 ----------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 + + +RA + ++T V VGI LAK+A AK + Sbjct: 431 GVGISEGSIWQEQEKADEIATNLRAEIKRKTDCHVSVGIGGNILLAKVALRKAKPAGQYQ 490 Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN- 219 E +++ L V+D+ G+ I KL+ + +K V DL T + Sbjct: 491 ------VRPEEVLDILAPLKVEDLPGVAYSIGGKLEEIDVKFVSDLRQTSKERLVSILGP 544 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 E+ RG ++ E P ++ + ++G R + + + +L Sbjct: 545 KTGEKLWEYARGIDRAEVGEQ-PIRKSVSADVNWGIRFVSQAEAEEFVHNLCKELERRLL 603 Query: 280 SEHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 +E + ++ I + + + SV T DS I + L Sbjct: 604 NEGVKGKNLTMKIMRRALDTPLDPAKHLGHGKCDTFTKSVTFGVATNDSGVIAKESVAIL 663 Query: 331 DAIWQAGHRYQKAGVMLGDFFS------QGVAQLNL-FDDNAPRPGSEQLMTVMDT 379 + + + GV + +Q L F AP Q V D Sbjct: 664 RSYKFSPGDLRGLGVQMTKLEPIKPSSVPEGSQKKLNFSAAAPPTKRPQTEPVHDE 719 >UniRef50_A3NBC4 DNA polymerase IV n=15 Tax=pseudomallei group RepID=A3NBC4_BURP6 Length = 403 Score = 334 bits (858), Expect = 4e-90, Method: Composition-based stats. Identities = 75/371 (20%), Positives = 137/371 (36%), Gaps = 27/371 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 CD + FYAS E P L G+P+ V + G + N +A+ GV Sbjct: 21 IIHCDCDCFYASVEMRDDPSLRGRPLAVGGRPDQRGVIATCNYDARRYGVHSAMSSALAM 80 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 ++ + Y S +M+ + +P VE S+DEA+ D++ C T Sbjct: 81 RKCP--DLLILPPAMDKYRAASRLIMAIYRDYTPDVEPLSLDEAYLDVSRATRCQGSGTL 138 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REIR V +TV G+A K +AK+A+ K + + ++A Sbjct: 139 IAREIRERVRDTVGVTVSAGVAPNKFIAKIASDWNKPDG------LFVVRPHEVDAFVAA 192 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G+ + +LD +GI+T L D + + + F R RG + Sbjct: 193 LPVRKLHGVGKVTAARLDKLGIRTCAQLRDWSLFDLHRTFGAFGRRLHELARGIDERPVR 252 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH--QYCRFISTFIKTSP 296 ++ + ++ + + + I ++ + R + I+ + Sbjct: 253 A-DQARKSVSVETTYVQDLAALDACAAEIRRLTGLLDARIERAGAARSIRKLYVKIRFAD 311 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA--GVMLGDFFSQG 354 F + D+ D A + + + GV + + ++ Sbjct: 312 F-----------QRTTVECVADATDAETAVALLAKGLARRRQAVRLLGVGVRIDEDTAER 360 Query: 355 VAQLNLFDDNA 365 Q+ LFDD Sbjct: 361 HGQIALFDDED 371 >UniRef50_B6K5W3 DNA polymerase kappa n=2 Tax=cellular organisms RepID=B6K5W3_SCHJY Length = 532 Score = 333 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 72/372 (19%), Positives = 140/372 (37%), Gaps = 30/372 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AFYAS E + +P KP+ V G + N A+ GV+ P F + Sbjct: 116 IIVHVDCDAFYASVEELEKPAYKTKPMAVGQ---GVLCTANYCARKFGVRSAMPEFIARQ 172 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ Y + S + L+E P + S+DEA+ DLT + + Sbjct: 173 LCP--NLIVLPLRMMKYQEKSAEIAKILQEYDPNMCKASVDEAYLDLTDYLTKHNEEETV 230 Query: 121 R----EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +R TV ++T +TV GI LAK+A++ K + + G E + M Sbjct: 231 EAVVEHLRQTVAEKTGITVSCGIGANLMLAKIASNMRKPNDQFSIG----RTREAILEFM 286 Query: 177 SALPVDDVW--------GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 LP V+ GIGR + ++L ++ + D+ + + Sbjct: 287 DTLPCRKVYLELNHNVNGIGRVLEQELSSLNVHNCGDILRRKGYLYYVFQEKSFQNLLSY 346 Query: 229 LRGEPCLQLEEFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 G ++ + ++ I +F + ++ Q + +E ++ + Sbjct: 347 ALGISNNVVKPTDASNRKSIGNEMTFSIPMGSEKTISQKLKQLCFSVSETMKQRNLVGNS 406 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + +KT+ F + + L T T +S I + L ++ + + GV + Sbjct: 407 VVLKLKTTSFEV------RTRQTNLNTYTNESDIIYKYVLQLLS--YELPVQVRLLGVRM 458 Query: 348 GDFFSQGVAQLN 359 + + + Sbjct: 459 TKLQDASIYEES 470 >UniRef50_B1MZW7 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=3 Tax=Leuconostoc RepID=B1MZW7_LEUCK Length = 361 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 139/365 (38%), Gaps = 21/365 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYA E P+L +P+++ + G V N A+ALGV Sbjct: 13 ILHVDIDAFYAQVEMRDNPELRNRPLIISRDPAETGGRGVVATANYVARALGVHSAMSAV 72 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + + L V S N++ Y +S + + ++E ++DEA+ D+T Sbjct: 73 EARQLAPEG--VFLSPNFKKYRQVSKTIHHIFHTFTEKIEPVALDEAYLDMTDSHLSG-- 128 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +IR +L+ T LT +GI+ K LAKL + K V + + + Sbjct: 129 ASIAAQIRHQILKETGLTSSIGISHNKLLAKLGSEFNKPNG------VTVITHDNMLSFL 182 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 + LP+ D G+G + K A+ ++ L L +R F + E + RG + Sbjct: 183 AELPIGDFRGVGAKTKAKFSALKVENGLQLRQLPKETLRGLFGKMGENLYWQTRGVHFGE 242 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 ++ + +Q + +F I + + +A A L+ + R ++ I+ Sbjct: 243 VQ-WQRQQQSVGKEATFRYFIHNEIDVHKAFKQLANEMIAALKVKQLTGRTLNIKIRDDA 301 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F L I A + + Q + G+ + + S Sbjct: 302 FNTITRAITRETPWPL-----SETLITQTAQSVFEEVIQTPFSVRLLGLSISNLQSSTFE 356 Query: 357 QLNLF 361 ++ LF Sbjct: 357 EMTLF 361 >UniRef50_B8M4C5 DNA-directed polymerase kappa, putative n=14 Tax=Leotiomyceta RepID=B8M4C5_TALSN Length = 654 Score = 332 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 82/367 (22%), Positives = 147/367 (40%), Gaps = 23/367 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+A+ E + RP+L P V G + N A+ G + G F K L Sbjct: 119 VVHVDCDAFFAAVEELDRPELKHLPFAVG---KGVLTTCNYVARKFGCRSGMAGFVAKKL 175 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTDF 119 ++C NYE Y+ + + + + P E SIDEA+ ++T N D + Sbjct: 176 CP--DLICIPQNYEKYSAKAEEIRAIFAQYDPCFESASIDEAYLNITAYCDENNMDPQEA 233 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +++RA + + T +TV GIA LAK+A++ K + S E + L Sbjct: 234 VQQMRARIAEETKITVSAGIATNTKLAKIASNQNKPNGQY----FIPSEREAIMSFVKDL 289 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLE 238 PV V GIGR ++L A+GI+T + +++ F + ++ G +++ Sbjct: 290 PVRKVNGIGRVFERELRAVGIETCGQIYPQ-RALLKRLFGGKAFQFLMQCYLGLGRTKIQ 348 Query: 239 E-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F E I+D ++R + A A+ L R + +K F Sbjct: 349 PAEDYERKSVGTESTFAE-ISDPDAIRVKLRWAADELAKDLARTQFKGRTLVLKVKLHTF 407 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGV 355 + + V + D+ + L + + R + G+ S Sbjct: 408 EV------YTRQVAPPKAVWLADDLYTYSLPILAKLQKEIPNMRLRLLGLRCTHLVSTKK 461 Query: 356 AQLNLFD 362 L+ F Sbjct: 462 VGLDFFG 468 >UniRef50_C4G2M8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2M8_ABIDE Length = 414 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 89/428 (20%), Positives = 168/428 (39%), Gaps = 52/428 (12%) Query: 1 MFALCDVNAFYASCETVFR----PD---LWGKPVVVLSN---NDGCVIARNAEAKALGVK 50 + DVN+ + S V + P+ L P + + G + A + AK GV+ Sbjct: 4 LIFHVDVNSAFLSWTAVKKLKEEPESVDLRTIPSAIGGDVSKRHGVITACSIPAKKQGVR 63 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + + + F S+++ Y + S + + L++ + VE SIDEA+ D+TG Sbjct: 64 TGEPVMRALEKCPELQL--FPSDFKTYREYSAKFIEILKKYALVVEQVSIDEAYLDMTGT 121 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + +I+A + + TV +GI+ K LAK+A+ K ++ V L E Sbjct: 122 D---EPVSMAEKIKAEIYESLGFTVNIGISTVKLLAKMASDFEKPYK-----VHTLFPKE 173 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVREL 229 + K M LP++ + G G R S+KL +G+KT+ D A D + + E Sbjct: 174 IKEK-MWKLPIEKLHGCGYRTSEKLRNIGVKTIGDAAALDKKLLCSLLGEKSGEYIHESS 232 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERI---TDYPSMRQAICSYAARAAEKLRSEHQYCR 286 G + + + I T M + I + +++L+ + Sbjct: 233 NGRGSDIVSGEREAAKSYSNETTLPYDIRVSTYDKEMPEVIKWLSESVSKRLKKDGAEGY 292 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA-------IWQAGHR 339 IS KTS F S L+ ++++I + + +++ Sbjct: 293 TISVSAKTSSFK------RRSKQTTLVESINNAKEIEKVSISLMKELCFGEKGLFEGDEG 346 Query: 340 YQKAGVMLGDFFSQGVAQLNLFD--------------DNAPRPGSEQLMTVMDTLNAKEG 385 + GV + Q+++F + + ++L T++ +N K G Sbjct: 347 IRLVGVGVSHLAEHECKQMDIFSYMKEKSVQDEIKLKETKIKEKEDKLSTMLKKINEKFG 406 Query: 386 RGTLYFAG 393 G + G Sbjct: 407 EGKIKKGG 414 >UniRef50_Q7NAR2 UmuC/DinP-like n=1 Tax=Mycoplasma gallisepticum RepID=Q7NAR2_MYCGA Length = 405 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 78/401 (19%), Positives = 159/401 (39%), Gaps = 28/401 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D +AF+AS E F P+ KP+VV S +N V + N A+ GV+ P F+ K Sbjct: 13 IFHIDFDAFFASVEENFNPEYNNKPLVVGSKSNGSIVSSANYIARKFGVRSAMPIFQAKK 72 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEEL-SPRVEIYSIDEAFCDLTGVRNCRD---L 116 L ++ +Y Y +S V S L + S ++E+ SIDE + D+T + Sbjct: 73 LCPS--LIIAEVDYPKYERVSAYVFSYLRDFVSNKMEVASIDECYMDVTDILEKNSEISA 130 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +D ++I+ + + T LTV +GI+ LAK+A+ K + + + Sbjct: 131 SDLAKKIQKQIYELTQLTVSIGISSNLFLAKMASDQNKPNGVYE------IWPDEIEEKL 184 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADT-DIRFIRKHFNVVLERTVRELRGEPCL 235 L + ++ IG + L+ + IK + + A + + F + G+ Sbjct: 185 WPLEIKKMYLIGSKKIPLLNQLNIKNIGNFAQFENKELLIDIFKNMYWDHYNHAHGKGSD 244 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ +++ I S++ +++DY S+ + +L++ + + IS I+T Sbjct: 245 FVDYERNSRKSISVSKNIRHKVSDYESLLKLFNDLFDDVYSRLKNHNLLAKNISVSIRTE 304 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 S S + N A + + + G+ ++ Sbjct: 305 K--------VRSLSFSFKQYSDKKTLFYNKAIDLFERLHN-NQLVANISISFGNITNKYK 355 Query: 356 AQLNLFDDNAPRPGSEQ----LMTVMDTLNAKEGRGTLYFA 392 N+ + ++ L +++ +N + + + A Sbjct: 356 FMPNI-NIYEELSKEQKDTMLLKKIVNQINKEYNKELVNIA 395 >UniRef50_Q29DW0 GA11465 n=3 Tax=Drosophila RepID=Q29DW0_DROPS Length = 954 Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 70/436 (16%), Positives = 139/436 (31%), Gaps = 74/436 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-------------------------- 35 D++ F+ S P+ G P+ V + G Sbjct: 273 IMHIDMDCFFVSVGLRSHPEWRGLPIAVTHSKGGNAATDVPVHPQADRQAELKLFAERFE 332 Query: 36 -----------------------CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+A G++ G + L + Sbjct: 333 HQLHDNIRADKVRSGFDKKMSLSEIASCSYEARAKGIRNGMFVGQALKLCPELKTI--PY 390 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQR 130 ++E Y +++ + T+ + + +E S DE F DLT + D+ F +R V + Sbjct: 391 DFEGYKEVAFALYDTVAQYTLNIEAVSCDEMFVDLTDLVEDLQVDVMSFVAHLREEVRNK 450 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T G+ K LA++A AK + G M+ ++ + G+G Sbjct: 451 TGCPCSAGVGTNKLLARMATKRAKPDGQYLLG-----PGTDVLGYMAPTALETLPGVGSS 505 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE-RTVRELRGEPCLQLEEFAPTKQEIIC 249 + KL+ G++ D+ T ++ + L RG L + ++ + Sbjct: 506 LRHKLEQAGLRNCADVQRTSLQTLESVVGKKLALTLYENCRGIDTRPLV-YEQKRKTVSA 564 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT---------SPFALN 300 ++G R T+ + +A +L + + I + S F + Sbjct: 565 EVNYGIRFTNTTECETFLRQLSAEVTTRLTDIKRKAKSIGLKVMVRAAEAPIEASKFMGH 624 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-----FSQGV 355 + S L T D I + R + H + G+ L + Sbjct: 625 GVCDTINKSFILTHATDDVNVITSHVLRLMKESGLPPHELRGIGIHLSKLSEATEVKKDN 684 Query: 356 AQLNLFDDNAPRPGSE 371 L +F+ + + E Sbjct: 685 VLLQMFEKMSEKRKGE 700 >UniRef50_UPI000186DDA3 terminal deoxycytidyl transferase rev1, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186DDA3 Length = 752 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 73/404 (18%), Positives = 143/404 (35%), Gaps = 61/404 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---------------------------- 32 ++ D++ F+ S P L G+PV V + Sbjct: 212 IYMHIDMDCFFVSVALRNYPHLKGQPVAVTHSKINFGANNSLIETKLNLAVENLDSLKLK 271 Query: 33 ------------NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADM 80 + + + + EA+ GV G L + S +++ Y ++ Sbjct: 272 SDEGVNQESKAFSMSEIASCSYEARKAGVCNGMYLGSALKLCP--NLKTISYDFKGYKEV 329 Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVG 138 S + +T+ E + +E S DE + D T V + + F +R + ++T T VG Sbjct: 330 SFMLYNTVAEYTLDIEPVSCDELYIDCTSVLSQIKINPIKFANILRQEIEEKTKCTSSVG 389 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 I++ K LA+LA AK V E+ + + + + DV GIGR I L + Sbjct: 390 ISENKLLARLATKKAKPNG------VFFLTPEKVEEFIKKVSIYDVPGIGRNIGGILKKL 443 Query: 199 GIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 ++T DL + + F+ K + + RG ++ ++ + ++G R Sbjct: 444 SVETCEDLQNFSLSFLMKTLGSKIGKNLYDHCRGIDDRKINCN-FERKSVSAEINYGIRF 502 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT---------SPFALNEPYYGNSA 308 D + + +++L + + I+ I + + + S Sbjct: 503 NDNEETEIFLKELSQEVSKRLVNIKMAGKNITLKIMFRAKDAPIEAAKYLGHGLCDVISR 562 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 SV L + D I N + + + G+ + S Sbjct: 563 SVTLPQASNDENIIANNVINLYHLLNIPPNELRGIGIHVNKLDS 606 >UniRef50_A7E7M1 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A7E7M1_SCLS1 Length = 1255 Score = 331 bits (849), Expect = 4e-89, Method: Composition-based stats. Identities = 70/398 (17%), Positives = 132/398 (33%), Gaps = 39/398 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+ + KP VV N + + N A+ GVK G Sbjct: 437 IMHVDFDSFFCAVSLKSAPEYFDKPAVVAHGNGTGSEIASCNYPARVFGVKNGMWMKNAI 496 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV--------- 110 L + ++ Y + S + ++ + S+DEAF D+T + Sbjct: 497 KLCP--DIKVLPYDFPAYEEASKAFYEAILDVGGIFQSVSVDEAFVDITSLCLAAGGTDG 554 Query: 111 ---------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + G +R + ++T V VGI LAK+A AK + Sbjct: 555 VGIREGSIWREQERAEEIGNALRKVIREKTGCNVSVGIGGNILLAKVALRKAKPAGQYQ- 613 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 E + L V ++ G+ I KL+ +G+K V D+ + Sbjct: 614 -----IKPEEVLDFVGELDVQNLPGVAYSIGGKLEEIGVKFVKDVRQLSKDRLMTVLGPK 668 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 E+ RG ++ E ++ + ++G R + + + +L Sbjct: 669 TGEKIWDYSRGIDRAEVGEQV-VRKSVSAEVNWGIRFISQVEAEEFVQNLCIELQRRLID 727 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + R ++ I F + + S+ L T D+ I A L Sbjct: 728 QRVKGRQMTMKIMRKAADAPLDPPKFLGHGNCDTFNKSIVLGVATNDATIIGREAVSILR 787 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPG 369 + + + GV + + FD + + Sbjct: 788 SYGFSPGELRGLGVQMTKLEPVKSSNGTPFDGSQRKIN 825 >UniRef50_UPI0001C32444 DNA-directed DNA polymerase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32444 Length = 370 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 140/358 (39%), Gaps = 21/358 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 + A D +AFYAS E + RPDL K V+V + V + A+ GV P + K Sbjct: 14 VIAHLDCDAFYASVELLRRPDLRDKAVIVAHDGPRSVVTTASYAARRYGVGSAMPLSRAK 73 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L + ++E Y +S + + R++ +DEA+ DLTGV Sbjct: 74 RLCPHA--ILLPPDFESYRRVSRALWEIVGGRLGRLQHLGLDEAYADLTGV---EKPVRV 128 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 RE+ V T +TV VG+ ++ +AK+ + K G E ++ Sbjct: 129 LRELVEQVRAETGITVSVGLGPSRLIAKICSDLGKPAGFVAMG-----REEAAQRFAGHS 183 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 P + GIG + ++L MGI+T+ L T + + F +R ++E Sbjct: 184 P-KLLPGIGPKSVERLREMGIETIGQLQATPEERLTERFGARHGRDLLRRAHFHDSSEVE 242 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + R+F E +T + + + A E L+ + R I+ ++ Sbjct: 243 TSR-VLKSRSNERTFDEDVTSLTQLEEILRRLAQGLCEGLQRREKRGRTIAIKVRLDD-- 299 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + + + + T D+ + + A L A + + GV L F + A Sbjct: 300 ----WTTVTRARTVDAHTNDTALVTDVALELLRA-YAPPRPVRLLGVRLASFEDEEGA 352 >UniRef50_C9AAQ9 DNA directed DNA polymerase n=4 Tax=Enterococcus RepID=C9AAQ9_ENTCA Length = 464 Score = 330 bits (848), Expect = 4e-89, Method: Composition-based stats. Identities = 95/426 (22%), Positives = 168/426 (39%), Gaps = 30/426 (7%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNND----GCVIARNAEAKA-LGVKMGDPW 55 DV +FYAS E + R D +VV+S++D G V+A + +AK+ LG+ Sbjct: 14 ILFIDVKSFYASVECISRGLDPIQAMLVVMSHSDNTGNGLVLAASPKAKSVLGISN---V 70 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNC 113 + +L + S Y + +V + + + +YSIDE DLT + Sbjct: 71 TRNDNLPTHPDLYKASPRMSFYIKENTKVNNVFRKYVGQDDLLLYSIDETMMDLTRTLDL 130 Query: 114 RDLTD----------FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV 163 ++I+ + + T L V +GI LAKLA K R + Sbjct: 131 FIPDKTISREEKRWLIAQQIQKDIYETTKLYVTIGIGDNPLLAKLALDNESKHNRSL--I 188 Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 + + + K+ P+ + WGIGRR K+L MGI+T+ LA +R ++ E Sbjct: 189 AEWTYDDVPTKVWQIAPMTEFWGIGRRTEKRLHLMGIETIEQLAHASPDLLRSRMGIIGE 248 Query: 224 RTVRELRGEPCLQLEEFAPT--KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 + G L E P ++ S+ + I A + A ++R Sbjct: 249 QLYHHAHGIDRTILSEPTPQVMEKSYGNSQVLHRNYYLQEEIEIVIKEMAEQVAARIRRH 308 Query: 282 HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQ 341 H I+ +I + E G S +K+ PT ++R ++ + G + Sbjct: 309 HCQTACINVYIGVAF---GETASGFSRQMKIP-PTDNTRKLVAHCLFLFRKFY-TGQVVR 363 Query: 342 KAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 G+ QL+LF+ + +L ++D + K G ++ A ++ Sbjct: 364 HIGITYSKLVYTENVQLDLFEQAEAQLRQRKLDLIIDKIREKYGFTSIVHATSRMEGARA 423 Query: 402 MKRAML 407 + R+ L Sbjct: 424 IARSKL 429 >UniRef50_D1HMR5 Whole genome shotgun sequence of line PN40024, scaffold_91.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HMR5_VITVI Length = 704 Score = 330 bits (848), Expect = 5e-89, Method: Composition-based stats. Identities = 83/357 (23%), Positives = 149/357 (41%), Gaps = 23/357 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++AFYA+ ET+ P L G+P+ V + N EA+ GV+ P F + Sbjct: 106 IWLHVDMDAFYAAVETLDNPSLRGRPMAVGGM--SMISTANYEARKFGVRAAMPGFIARK 163 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--D 118 L ++ ++++ Y S+ ++ P S+DEA+ D+T V N RDLT + Sbjct: 164 LCPE--LIFVPTDFKKYTYYSDLTRKVFQKYDPNFMAASLDEAYLDITEVCNERDLTSGE 221 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+R +V + T LT G+A + LAK+ + K + V SN +S+ Sbjct: 222 IAEELRTSVHEVTGLTCSAGVAPNRLLAKVCSDINKPNGQF----VLPSNRMAVMTFISS 277 Query: 179 LPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFNVVLERTVREL-RGEPCLQ 236 LP+ + GIG+ L GI T ++ F+ F+ + G Sbjct: 278 LPIRKIGGIGKVTEHILSGVFGINTCEEMLQKG-GFLCALFSRSSADFFLSVGLGLGKTD 336 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 ++ I R+F D + Q + + + ++ E R ++ +KT+ Sbjct: 337 -TPQVRFRKSISNERTFS-ATDDTALLYQKLAELSEMLSIDMQKEGLSGRTLTLKLKTAS 394 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 F + S +V + DI+N A + L+A + + G+ + F Sbjct: 395 FEV------RSRAVTMQKYICSREDILNHALKLLNA--ELPLSLRLIGLRISHFNED 443 >UniRef50_D1Y4D1 DNA polymerase IV n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4D1_9BACT Length = 412 Score = 330 bits (847), Expect = 6e-89, Method: Composition-based stats. Identities = 75/389 (19%), Positives = 133/389 (34%), Gaps = 22/389 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYA+ E P L G+P+++ + G V + EA+ GV + Sbjct: 5 VIHVDMDAFYAAVEIRDNPALKGRPLIIGALPDERGVVATCSYEARKFGVHSAMNIKEAY 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 R + N E Y S+R+ + E ++DE + D+T Sbjct: 65 RRCPRG--IFMHPNREKYRQASDRLHGIWSSYADVAEYVALDEGYLDVTRSALRFGGARR 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R I+ T LT VG+ +KT AKLA+ K G ++ L+ Sbjct: 123 VARLIKERTRAETGLTCSVGVGYSKTSAKLASEEKKPD-----GYFEILTPRDFIGLIID 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + ++G+G R ++KL GI TV D+ + R G + Sbjct: 178 RDITVLYGVGARTAEKLYHAGIHTVRDVQNNRERLAALLGGKTGRHLAELSLGIDDRPVI 237 Query: 239 EFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + I +F + + + +R I + ++L + R ++ Sbjct: 238 PADEADAKSISREVTFQKDTSHFGYLRDVILLLSLNLGDRLAALGLNGRTVTLKATYWNM 297 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S +I A + L I ++ + GV L + Q Sbjct: 298 K------TITRSHS-GESVDHPYEIYQAGSALLAGIEKS--PVRLIGVGLQNLSETYARQ 348 Query: 358 LNLFDDNAPRPGS--EQLMTVMDTLNAKE 384 L + R E+L + L + Sbjct: 349 LTFDTLDGERERRHAERLRARLLDLQRRY 377 >UniRef50_B2AY86 Predicted CDS Pa_1_10240 n=3 Tax=Sordariomycetes RepID=B2AY86_PODAN Length = 1122 Score = 330 bits (847), Expect = 7e-89, Method: Composition-based stats. Identities = 81/419 (19%), Positives = 140/419 (33%), Gaps = 51/419 (12%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+ KP VV + + + N A+ GVK G + Sbjct: 344 ILHVDFDSFFCAISLQKCPEYADKPTVVAHGSGTGSEIASCNYPARKFGVKNGMWMKRAL 403 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG---------- 109 +L G+ ++ Y S L + V+ SIDEA D+T Sbjct: 404 ELCP--GLKVLPYDFAGYEKASEVFYQVLLGVGGVVQSVSIDEALVDVTDVVLRGVGSTG 461 Query: 110 --------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + R +R V +RT V VGI LAK+A AK + Sbjct: 462 VGVGEGSVCREQEKAEEIARGLRGEVRRRTGCEVSVGIGGNVLLAKVALRRAKPAGQHQ- 520 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 E + L V+ + G+ I +L+ MGI+ V D+ T + Sbjct: 521 -----IRPEEVLDSIGELGVEGLPGVAGSIGGRLEEMGIRFVKDIRGTTRERLVSVLGPK 575 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 ER RG +L E P ++ + ++G R + + + ++L + Sbjct: 576 TGERLWDYARGVDRSELGEQ-PVRKSVSADVNWGIRFVSQEEAEEFVRNLCGELEKRLLA 634 Query: 281 EHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 E + ++ I + + + S T D+ I A L Sbjct: 635 EGVKGKLLTVKIMRRSLDAPLDPAKHLGHGKCDTFNKSASFGVATCDAEVIGKEAVGILR 694 Query: 332 AIWQAGHRYQKAGVMLGDF------FSQGVAQLNL-FD----DNAPRPGSEQLMTVMDT 379 + + + GV + + +Q L F P P E+ ++D Sbjct: 695 SYKFSPGDLRGIGVQMTKLDHIKPSAAPEGSQKKLNFGSAVAAQPPPPRRER-EQIVDD 752 >UniRef50_Q47E66 UMUC-like DNA-repair protein n=2 Tax=Betaproteobacteria RepID=Q47E66_DECAR Length = 387 Score = 328 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 87/390 (22%), Positives = 148/390 (37%), Gaps = 49/390 (12%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN----------------------DGCVIA 39 A D++AF+AS E + P+L G+PVVV N G V Sbjct: 14 IAHLDMDAFFASVELLNYPELRGQPVVVGGRNVNQPISQPDGTKRFGRLREYVGRGVVTT 73 Query: 40 RNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYS 99 EA+A GV G K ++ G + +N++ Y + S R + + ++P +E Sbjct: 74 STYEARAFGVFSGMGLMKSAEMAP--GTILLPANFDAYLNYSRRFKAAVATIAPLIEDRG 131 Query: 100 IDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 IDE + DL+ + R I+ V T LT +GI K L+K+ + K Sbjct: 132 IDEIYIDLSDIDEESLP--LARRIKQAVFDATGLTCSIGITPNKLLSKICSDLQKPDGIT 189 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 G+ D+ + L + GIG + +++L+ +GI+T+ LA T + + HF Sbjct: 190 ILGIADI------ESRIWPLAAKKINGIGPKANERLEKLGIQTIGQLAATPVELLLNHFG 243 Query: 220 -VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT---DYPSMRQAICSYAARAA 275 + + G ++ T + I +F + D + + R A Sbjct: 244 RSTGQWMHQVAHGRDDRPVKTSRET-KSISRESTFQRDLHAKQDRSELSEIFTGICLRVA 302 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 + L+ + + I ++ + F + L T D I AA L + Sbjct: 303 DDLKRKGLVAKTIGIKVRYADFQA------VTRDFTLDLATDDGMTIRRAAGECLKRV-P 355 Query: 336 AGHRYQKAGVMLGDFFSQG-----VAQLNL 360 R + GV S AQ +L Sbjct: 356 LEKRIRLLGVRASALASASTLADLPAQQSL 385 >UniRef50_D1BHR1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=3 Tax=Actinomycetales RepID=D1BHR1_SANKS Length = 489 Score = 328 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 94/362 (25%), Positives = 156/362 (43%), Gaps = 19/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCV-IARNAEAKALGVKMGDPWFKQKD 60 A D +AF+AS E RP L G+PV+V V + EA+A G + P + + Sbjct: 7 IAHLDADAFFASVEQHQRPSLRGRPVLVGGVGPRGVVATASYEARAYGARSAMPMEQARR 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTDF 119 + VV ++ Y+ S ++M L E+S +VE SIDEAF +L + + DL Sbjct: 67 MCPTATVVV--PRFDAYSAYSAQIMEVLREVSEQVEAISIDEAFAELDHLPGSSADLEAL 124 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 E R +RT L+V +G+ ++K +AKLA+ AAK G V + + + + AL Sbjct: 125 ALEFRRRAHERTGLSVSLGLGRSKLVAKLASEAAKP------GGVKVVDPADEDAFLLAL 178 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 PV +WG+G + +LD +G++TV DL + + R RG + Sbjct: 179 PVRALWGVGPVSAARLDQLGVRTVEDLRAQPMDTLVMATGEAAGTNLYRIARGWDDRPVT 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ +F + + ++ A+ A +L R + ++ + F Sbjct: 239 TVR-ERKSAGAEHTFDDDLHGRRAIAAALDGVTDSALRRLDRHGVAARTVVVKVRVASFT 297 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + SV L PT D + AA R+LD + + + GV + L Sbjct: 298 ------TITRSVTLSRPTSDVDALREAARRALD-LAEVVEPVRLLGVSFHGLSAHSQLML 350 Query: 359 NL 360 L Sbjct: 351 PL 352 >UniRef50_D1WCN2 Nucleotidyltransferase/DNA polymerase for DNA repair n=4 Tax=Lactobacillus jensenii RepID=D1WCN2_9LACO Length = 443 Score = 328 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 89/425 (20%), Positives = 163/425 (38%), Gaps = 28/425 (6%) Query: 1 MFALCDVNAFYASCETVF---RP------DLWGKPVVVLSNNDGCVIARNAEAKA-LGVK 50 + + D +FYASCE + P L +P ++A + AK G+ Sbjct: 18 LIFMIDNKSFYASCECLRLGLNPMTTALAALSHQPD--SDEQSSLIMAASPLAKKKYGLT 75 Query: 51 MGDPWFKQKDLFRRC---GVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFC 105 + +DL + ++ + LY + S V+ + + + YSIDE+ Sbjct: 76 NVM---RARDLPPKSQREDLLLVEPHMNLYIEKSMEVLDIFRKYAAEEDIHTYSIDESMI 132 Query: 106 DLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV 163 D+T + D GR+I+ + ++ L GI + LAKLA K ++ + Sbjct: 133 DMTESWHLFGTDPYLVGRKIQKEIKEKLGLYTTCGIGENPLLAKLAMDIDAK--KRWSMI 190 Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 ++ + ++DVWGI + +++L +GI + +LA + ++ F ++ E Sbjct: 191 AFWHYIDVPDTIWQIKNLEDVWGINKSTAQRLKKLGINDMNELAHCNPEKLKSEFGIIGE 250 Query: 224 RTVRELRGEPCLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH 282 + G + + P ++ S+ + I A + A ++R Sbjct: 251 QLFAISWGVDRSIIRYKYKPKRKSFGNSQILMRDYLGQREIEIVIREIAEQVAARIRKHK 310 Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 IS I S N G +AS K+ T D+ + W G + Sbjct: 311 LLTSCISLHIGFSKLK-NNKRNGINASKKIT-ATNDNIALTTELRSLFRKYWN-GEAVRT 367 Query: 343 AGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 + D QL+LF D A + + V+D+L K G +L A + + Sbjct: 368 ISISYSDLLPDIEQQLDLFSDPAKQIKRKNFDYVIDSLREKYGPTSLVKASSLLPGATAI 427 Query: 403 KRAML 407 +RA L Sbjct: 428 RRANL 432 >UniRef50_C5BNY2 DNA polymerase IV n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BNY2_TERTT Length = 360 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 77/365 (21%), Positives = 131/365 (35%), Gaps = 24/365 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D + F+A+ E PDL P+ V G + N A+ GV P K Sbjct: 8 IIHLDADCFFAALEIRENPDLADFPLAVGGDPGRRGVISTCNYLARQYGVHSAMPSAHAK 67 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L +V SSN+ LY +S ++ S ++E S+DEAF D++ + T Sbjct: 68 RLCPE--LVIRSSNFPLYKQVSAQMFEIFTRFSEKIEPLSLDEAFLDVSDCQQFHGSATL 125 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REIR V +TV G+A K LAK+A+ +K T ++ + + Sbjct: 126 IAREIRRQVETELGITVSAGVAPIKFLAKIASDWSKPNGLFT------VTPDKVTEFVKD 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + G+G+ +KL G+ DL + + F R G +++ Sbjct: 180 LPLQKLPGVGKVTREKLAREGLLYCRDLESYSEHELVQRFGRFGANLKRMSVGIDEREVK 239 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK---LRSEHQYCRFISTFIKTS 295 ++ + +F I+ + I E+ L+ + + +K Sbjct: 240 SSR-ERKSLSIETTFARDISSPGEIADQIDQLVVGLEERYNKLQRKVAVSKKF-VKLKFD 297 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F S K+ S++ + + GV L F + Sbjct: 298 DFTQTTLESSVSRCGKIF----SSQEFERMCYAAWAR---QKRPLRLLGVGLS-FAERSH 349 Query: 356 AQLNL 360 Q L Sbjct: 350 PQAQL 354 >UniRef50_C1I721 DNA-damage repair protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I721_9CLOT Length = 415 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 95/402 (23%), Positives = 161/402 (40%), Gaps = 29/402 (7%) Query: 1 MFALCDVNAFYASCETVFRPDL-------WGKPVVVLSN---NDGCVIARNAEAKALGVK 50 + DVN+ Y S V L P +V N G V+A++ AK +K Sbjct: 5 VIFHIDVNSAYLSWTAVRMLQLGETTEDIREIPSIVGGNTDERHGIVLAKSILAKRYNIK 64 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + F NY L+ D SN + + L E SP+++ YS+DE F D++ Sbjct: 65 TGEPVVDALKKCP--NLKIFKPNYRLFMDCSNAMYNLLYEYSPKIQRYSVDEVFIDMSHF 122 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + + EI+ + V +GI+ K LAK+A+ K + L E Sbjct: 123 KENY--MEKAIEIQNRIRSELGFNVNIGISTNKLLAKMASDLEPKNA-----IHTLFKEE 175 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 Q K M LPVD+++ +GR KLD + I T+ +LA+ DI + F + Sbjct: 176 IQNK-MWTLPVDNLFMVGRATKSKLDKLNINTIGELANFDIGILESIFKSHGKVIHNYAN 234 Query: 231 GEPCLQLEEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G + ++ + I S + +T + I S +LR+ + CR IS Sbjct: 235 GIEESSVRKYNYVNVKGIGNSTTIAWDVTSKDEALKIILSLTESVCIRLRNNNSLCRVIS 294 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 IK F L + +I ++ + W+ G ++ GV + + Sbjct: 295 ISIKGFNFE------RYIHQRTLSNYIDCTEEIYKEMVKAFNEAWR-GETIRQLGVRVSE 347 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 + Q +LFD + L +D++ + G ++ Sbjct: 348 LCNNEFFQSSLFD-SKKLEKQRALDKTIDSIRERYGNYSVIR 388 >UniRef50_Q041Q9 Nucleotidyltransferase/DNA polymerase for DNA repair n=13 Tax=Lactobacillus RepID=Q041Q9_LACGA Length = 439 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 84/422 (19%), Positives = 164/422 (38%), Gaps = 19/422 (4%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSN------NDGCVIARNAEAKA-LGVKMG 52 + + D +F+ASCE + + + V+S G ++A + AK G+ Sbjct: 11 LIFMIDNKSFFASCEALRLGLNPMETCLAVVSRQPDSCWGSGLIMAASPLAKKKYGLHNV 70 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGV 110 + ++ + + LY S +V+ + + + +YSIDE D+T Sbjct: 71 MRVRQLPPKWKAPDLKLVEPHMNLYIKRSVQVLDIFRKYAANEDIHMYSIDEGMIDMTDS 130 Query: 111 RNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 R+I+ + L GI + LAKLA + K ++ Sbjct: 131 WKLFGNGPYYVARKIQKDIHDALGLYTTCGIGENPLLAKLAMDNSAKHKKSMLAF--WHY 188 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 L+ + ++DVWGI R + +L +GI + DLA + ++K F ++ E+ + E Sbjct: 189 LDVPDTIWKIEKLEDVWGINTRTANRLRKIGINNMYDLAHSSPYLLKKEFGIIGEQLLAE 248 Query: 229 LRGEPCLQL-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 G + +++ P + S+ + + I + A ++R+ + Sbjct: 249 SWGVDRSIIRQKYHPKSKSYGNSQVLTRDYFNQREIELVIREIGEQVAARIRAHNLRAGK 308 Query: 288 ISTFIKTSPFALNE--PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 +S +I S F L E G K+ PT + D++ W + V Sbjct: 309 VSLYIGFSLFQLTETTKRGGFGVQRKIT-PTNVNHDLVKELIALFRENWHR-ESVRTISV 366 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 D G QLN+ +D + +L ++D + + G +L A ++ ++R+ Sbjct: 367 SYTDLSPDGTQQLNMLEDFDLQIKRYKLDHIVDKIRKEHGFTSLVKASSLLKGATAIERS 426 Query: 406 ML 407 L Sbjct: 427 NL 428 >UniRef50_B6Q7Y5 DNA-directed polymerase kappa, putative n=2 Tax=Leotiomyceta RepID=B6Q7Y5_PENMQ Length = 647 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 84/368 (22%), Positives = 146/368 (39%), Gaps = 23/368 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AF+A+ E + RP+L P+ V G + N A+ G + G F K Sbjct: 116 IVVHVDCDAFFAAVEELDRPELKHLPMAVG---KGVLTTCNYVARKFGCRSGMAGFVAKK 172 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 L ++C NYE Y + + + E P E SIDEA+ ++T N D + Sbjct: 173 LCP--DLICIPQNYEKYTAKAEEIRAIFVEYDPCFESASIDEAYLNITAYCDENDMDPQE 230 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +++R+ + T +TV GIA LAK+A++ K + S E + Sbjct: 231 AVQQMRSRIADETKITVSAGIAANTKLAKIASNQNKPNGQF----YIPSEREAIMAFVKD 286 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR-GEPCLQL 237 LPV V GIGR ++L A+GI+T + +++ F + + G ++ Sbjct: 287 LPVRKVNGIGRVFERELRAIGIETCGQIYPH-RASLKRLFGEKAFHFLMQCHLGLGRTKI 345 Query: 238 EE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + ++ + +F E I+D ++R + A A L R + IK Sbjct: 346 QPAVDYERKSVGTESTFSE-ISDPDAIRAKLRWAADELARDLSRTQFKGRTLVLKIKLHT 404 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQG 354 F + + V + D+ + L + + R + G+ S Sbjct: 405 FEV------YTRQVAPPKAVWLADDLYTYSLPILAKLQKEIPNMRLRLLGLRCTHLVSTK 458 Query: 355 VAQLNLFD 362 A L+ F Sbjct: 459 KAGLDFFG 466 >UniRef50_A0D236 Chromosome undetermined scaffold_35, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0D236_PARTE Length = 591 Score = 327 bits (840), Expect = 4e-88, Method: Composition-based stats. Identities = 88/359 (24%), Positives = 141/359 (39%), Gaps = 20/359 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++A D++ FY +CE + +P+L KPV V V N A+ GV+ P F K Sbjct: 87 IWAHFDMDMFYVACELLDKPELKDKPVAVGQ---TIVSTANYVARKFGVRSAMPGFVAKK 143 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLTD 118 L ++ ++E Y +SN M+ L++ +E +DEA DLT N D Sbjct: 144 LCPE--IIFIPCHFEKYKSVSNIFMTILKKYDDNLESMGLDEANLDLTEYINNSQEDPAI 201 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 IR +L T LT G+ K +AKLA+ K V + + Sbjct: 202 LCENIRKDILLATQLTASCGVGPNKMIAKLASEINKPNGLH----VVEQSATAVLNFLEK 257 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + GIG + L + T D+ D E G Sbjct: 258 LPIRKIPGIGNITEQILSGLNFNTCKDVRDRADELYVIFTPKTFEYIFYSCWGVARNYHV 317 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 EF + I C R+F I+ + A + AE+++SE + ++ IKTS F Sbjct: 318 EF-EDQHSISCQRTFSS-ISTQREFEDKVDYIAEKLAEEMQSEEKVGNHLTLIIKTSKFE 375 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S S++L T ++ I + L I Q + G+ + ++ Q Sbjct: 376 I------RSKSLQLNQYTNQAKQIAIYGKQLL-KIMQLDEPIRLLGLKMSSLANEKQIQ 427 >UniRef50_A6DIV6 DNA polymerase IV n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIV6_9BACT Length = 354 Score = 327 bits (839), Expect = 6e-88, Method: Composition-based stats. Identities = 74/369 (20%), Positives = 135/369 (36%), Gaps = 31/369 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+A+ E +P+L GK V V G + A N EA+ GV Sbjct: 8 IIHVDMDCFFAAVEVRDQPELKGKAVAVGGAAKRRGVIAAANYEARNFGVHSALSTAIAL 67 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTD 118 ++ N Y ++S V + + VE S+DEAF D++ + T Sbjct: 68 RRCPE--LIIVRPNMSKYKEVSTEVFKIFRKYTHLVEAISLDEAFLDVSECPLHHGSGTL 125 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+ + +T L GIA K LAK+A+ K T E K + Sbjct: 126 IAEAIKKDIYAKTGLRASAGIAPNKYLAKIASDWMKPDGIYT------IPPENIEKFVQQ 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQL 237 LPV +WG+G+ ++L G++T DL ++ + K E + +G ++ Sbjct: 180 LPVKKIWGVGKETLRELRKFGLETCADLQKISVKNLAKLIGTNRAEELLELAKGIDNREV 239 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE-----HQYCRFISTFI 292 + ++ R+F + + A+ +KL++ + + Sbjct: 240 KANR-ERKSYTRERTFDSDL-SHGECSDALKVIFDECKKKLKAYLEEKPQYKIKTSVLKV 297 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 K + F + + + + + A+ + R + G + F Sbjct: 298 KFADF-----------TSTTVECGDLNFEWSVIESLLTKALERNQLRVRLMGCGV-KFTK 345 Query: 353 QGVAQLNLF 361 AQ +LF Sbjct: 346 HDSAQPDLF 354 >UniRef50_C7MBE5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MBE5_BRAFD Length = 422 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 88/407 (21%), Positives = 153/407 (37%), Gaps = 22/407 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIAR-NAEAKALGVKMGDPWFKQKD 60 D++AF+AS E P L G PVVV V+A + A+ G++ P + Sbjct: 16 ILHLDMDAFFASIEVRDDPGLEGLPVVVGGAGARGVVAAASYPARTRGIRSAMPMASARR 75 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDF 119 L +V + Y +S +VM L ++ E S+DEAF D+ G R Sbjct: 76 LAP--DLVIVPPRIDHYRQVSAQVMQLLGDVVAETEQISVDEAFLDVRGARRLFGPPEQI 133 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + +R + + L VG + ++ +AK+A+ AK + ER + ++ L Sbjct: 134 AQLLRRRIREELGLPSSVGGSVSRAVAKIASAQAKPDGM------LIVPAERTAEFLAPL 187 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V + G+G + + L +G++T+ L + + + G L Sbjct: 188 SVAVISGVGPKAQEALARIGVRTIGQLREIPRSTLARALGPRAPEIAALADGSDRTGLGH 247 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 A + + R++ E +TD +R+ I + A A +LR R + ++ Sbjct: 248 RARDR-SLGTERTWDEDLTDPDEVRRRITTMADDVARQLRRSGFVARTVVLKLRAPDGT- 305 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA--Q 357 + S + PT + + + A R + AGV + A Q Sbjct: 306 -----TLTRSSTMDQPTASGERLRSQVIPLWERERPAMPRLRLAGVRVSHLEPGEGAFMQ 360 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 L A G + L T MD + G +L Q +R Sbjct: 361 SEL---TARSAGWQDLETAMDRALERFGSASLGRGSTLSSATDQARR 404 >UniRef50_Q7Q6B2 AGAP005939-PA n=2 Tax=Culicidae RepID=Q7Q6B2_ANOGA Length = 1055 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 67/436 (15%), Positives = 133/436 (30%), Gaps = 77/436 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S P L G PV V + Sbjct: 290 IMHIDMDCFFVSVGLRKYPHLRGLPVAVTHSRGSEARVPSHPGQNRALEIELYHKRLEER 349 Query: 37 -----------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 + + + EA+ GVK G L + + Sbjct: 350 YKAPDIPIESRLAAIDEHNSLSEIASCSYEARQCGVKNGMFVGAALKLCPELKTI--PYD 407 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL--TDFGREIRATVLQRT 131 ++ Y ++++++ T+ + +E S DE F DLT + + +F +R + T Sbjct: 408 FDGYREVAHQLYDTIARYTLDIEAVSCDEMFVDLTELLQSTGVGVMEFVTYVRNEISTAT 467 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 GI + A++A AK + + M +P+ ++ G+G Sbjct: 468 GCDCSAGIGANRLQARMATKRAKPNGQYHLV------PGAVEEYMKVIPIAELPGVGPST 521 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICS 250 S +L M T DL ++ F E RG L + ++ + Sbjct: 522 SHRLRKMTYVTCADLQTIPKNVLQTEFGKKFGETLYNACRGIDERPLV-YDRGRKSVSVD 580 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF---------IKTSPFALNE 301 ++G R + + + + +L Q + ++ ++T+ F + Sbjct: 581 VNYGIRFSTEQEVERFMRQLTQEIHRRLVELRQRGKLVTVKLLVRSPEAPVETAKFMGHG 640 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF--------SQ 353 + S L T D I A + + A + G+ + F Sbjct: 641 LCDVVTKSQPLRQHTDDRGMIEGAVLGLMRMLAIAPSELRGIGIQISKFEGTKHAANSEA 700 Query: 354 GVAQLNLFDDNAPRPG 369 G ++F + Sbjct: 701 GNRLKSMFQKVEDKRK 716 >UniRef50_D2VFM3 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VFM3_NAEGR Length = 888 Score = 325 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 135/363 (37%), Gaps = 23/363 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D++ F+AS P L KP+ V + DG + + N A+ GV+ G + + Sbjct: 271 VVHIDMDCFFASIAMRDNPSLKNKPIAVSYSTDGTGDISSANYCARDFGVRAGMWMKQAR 330 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN---CRDL 116 +L ++ +E Y + ++++ L RV+I SIDEAF ++T +L Sbjct: 331 ELCP--DLIVVPYEFEKYNEAASKIDEILNSHCERVKIISIDEAFIEITNELKNNTVEEL 388 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + +IR + + T T G++ + LA++A AK + + + + Sbjct: 389 NELVSKIRNEIERETKCTASAGMSTNQLLARIATKKAKPNGQFYL------DAKEAVSFI 442 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCL 235 L ++++ +G + K + M I L +++ E LRG Sbjct: 443 ENLNIEEIPSVGWKTKKFFNQMSITKCSQLLSYSKTELKELVGEKKGETLYNFLRGIDKR 502 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT- 294 + ++ + ++G R T + + I + +L++E+ + I +K Sbjct: 503 PFFD-DTGRKSVGVEVNYGIRFTKMAQVSEFIDKLSIEVTSRLKNENVKGKAIVLKVKKR 561 Query: 295 -------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + + S S + T DS I + + + + + Sbjct: 562 KDEAPEAKKYLGHGICDNFSKSCTVPYFTDDSDLISRKVKDLYNQLSIEAEDLRGIAIQI 621 Query: 348 GDF 350 Sbjct: 622 QKL 624 >UniRef50_B4MLB6 GK17515 n=1 Tax=Drosophila willistoni RepID=B4MLB6_DROWI Length = 1022 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 69/440 (15%), Positives = 145/440 (32%), Gaps = 74/440 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-------------------------- 35 D++ F+ S P+L G+PV V + G Sbjct: 275 VMHIDMDCFFVSVGLRLHPELRGQPVAVTHSKGGNAATDVPVHPQADRQAEQELFAQRFE 334 Query: 36 -----------------------CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+A G++ G + +L + Sbjct: 335 HLLHDNIRADKVRTGFEKKMSLSEIASCSYEARAKGIRNGMFVGRALELCPELKTI--PY 392 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQR 130 +++ Y +++N + T+ + + +E S DE F +LT + + D+ +F +R V + Sbjct: 393 DFDGYREVANALYDTVAQYTLNIEAVSCDEMFVELTDLVSELQVDVMEFVGHLREEVRSK 452 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T G+ K L+++A AK + L+ M+ ++ + G+G Sbjct: 453 TGCPCSAGVGANKLLSRMATKEAKPNGQ-----FLLNPDGDILSYMAPTALESLPGVGSS 507 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPTKQEIIC 249 IS KL G+ D+ + + + + + RG L + ++ + Sbjct: 508 ISHKLKQAGLNNCGDVQKISVEQLETVLGKKMAQTLHQNCRGIDPRPL-AYEQQRKSLSA 566 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALN 300 ++G R T + + + +L+ + + I+ + TS F + Sbjct: 567 EVNYGIRFTKTSECEKFLRQLSIEVHTRLKEVKRTTKSITLKLMVRAAEAPIETSKFMGH 626 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN- 359 + S L T T D I + L + + G+ L + Sbjct: 627 GVCDVWTKSALLRTGTADVNIITDQVLSLLKQSNLPSNELRGVGIHLNKLEDPTEMKGEN 686 Query: 360 ----LFDDNAPRPGSEQLMT 375 +F + + Q Sbjct: 687 VLKQMFSKISEKKKDNQAEK 706 >UniRef50_A0AM11 Complete genome n=24 Tax=Listeria RepID=A0AM11_LISW6 Length = 418 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 96/417 (23%), Positives = 163/417 (39%), Gaps = 19/417 (4%) Query: 1 MFALC-DVNAFYASCETV-FRPDLWGKPVVVLSNN---DGCVIARNAEAKA-LGVKMGDP 54 + +N F+AS E V R + +VV+SN G V+A + K +K G Sbjct: 5 VIFYVLILNRFFASVECVKRRLNPLDAYLVVMSNAERAGGLVLAATPKMKQDHHIKTGSR 64 Query: 55 WFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLTGV-R 111 ++ ++ +LY ++ + + + P + +YSIDE F D+TG Sbjct: 65 MYELPTW--DKRIIIAPPRMKLYLKVNAMIQAIFKRYVPAEFIHVYSIDECFLDITGSHL 122 Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + R+I+ +L+ L V VGI LAKLA K + G+ + + Sbjct: 123 LFGSTEEIVRKIQRDILEELRLYVTVGIGDNPLLAKLALDNVAKN--RDDGIAEWRYADV 180 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + +DDV GIGRR +L MGI + L+ T ++K V+ E+ G Sbjct: 181 PETIWKIRHLDDVCGIGRRTVVRLQKMGIFNMYQLSQTPPPVLKKAMGVIGEQLYYHAHG 240 Query: 232 EPCLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 L E + P + S+ + I A +LR H I Sbjct: 241 IDYSLLNEKYVPVSKSYGKSQILERDYHASAEVEIVIREMVEEVAMRLRQNHVDTAVIHL 300 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 I S +++ + G S K+ + T S +I + + + + G Sbjct: 301 SIGYSKYSIKK---GFSHQAKIPS-TSSSHALIPYFLQLFRR-YDEREPVRSIAISCGKI 355 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + QLNLF+D + EQL +D + + G +L A + +KR+ + Sbjct: 356 TLKTGLQLNLFEDTSHTLNQEQLEITVDKIRTRYGFKSLMHASSLLNGATGLKRSEM 412 >UniRef50_A5IXL3 DNA damage repair protein MucB n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXL3_MYCAP Length = 415 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 76/399 (19%), Positives = 161/399 (40%), Gaps = 21/399 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQK 59 + D ++++ S L KPV V + + + + E K G+K+G P F + Sbjct: 6 IIFHIDFDSYFVSAHRSKDHRLKNKPVAVSNGLSRSICSSISYELKNAGIKVGWPRFMIE 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNCRDLTD 118 + N++LY SN + + + +E+ SIDE + D+T + ++ Sbjct: 66 KKAPET--IFVEPNFDLYYTTSNNIFDYIASNYTANIEVGSIDECWVDVTAIAEGKNPVA 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R+++ + + + + +GI+ +K AK+A+ AK + GV + N + Sbjct: 124 LARKLQEDINEIFDIPISIGISYSKWAAKIASDLAKPF-----GVKFIENHNDLETQIWP 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI--RFIRKHFNVVLERTVRELRGEPCLQ 236 L + +GIG + + KL +KT+ LA + + F L + E G + Sbjct: 179 LNIQKYYGIGEKTADKLIKADVKTIGQLARSSELNSDLYMIFRNRLSAFINEANGNGNDK 238 Query: 237 LEEFAPTKQEIICSRSFG-ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 L + I +F + + + I + A + + + ++ + ++ I+ Sbjct: 239 LTYEHNNLKGIGNELTFPLYDFYERSEIYKVIKNIAYKVSHRAQNRNVVGFTLTVIIR-- 296 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--Q 353 + +KL+ PT D+ I A + +W+ + G+ L + + + Sbjct: 297 ----SVSKVWKGKQMKLVEPTNDAEQIYKNAIILFEKLWKE-QPIRGVGLRLTNLINEFE 351 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 QL +FD ++ +++ +N K G+ L Sbjct: 352 HFKQLTIFDTYDDYKQESKVNNIINDINKKVGKVVLKTG 390 >UniRef50_B7QCT1 Terminal deoxycytidyl transferase rev1, putative n=1 Tax=Ixodes scapularis RepID=B7QCT1_IXOSC Length = 904 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 79/400 (19%), Positives = 144/400 (36%), Gaps = 52/400 (13%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------ 36 + D++ F+ S RP L GKPV V +G Sbjct: 258 VLMHIDMDCFFVSVGLRSRPHLKGKPVAVCHGKNGGIQPSSSHSRASDVPGTSGSGADGK 317 Query: 37 -------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLE 89 V + + EA+ GV+ G + K L +V +E Y+++S + T+ Sbjct: 318 GLMSMSEVASCSYEARDAGVRSGMFLGRAKQLCP--NLVAIPYEFESYSEVSKILYDTVA 375 Query: 90 ELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + +E S DE + D+T V + DF +R + ++T T VG+ A+ Sbjct: 376 SYTLDIEAVSCDELYADVTKVLQEAECTPNDFASFLRKEIEEKTCCTASVGLGPNMLAAR 435 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 +AN +AK + + + A+ V + G+G R+ +L MGI+T L Sbjct: 436 VANRSAKPNGHRF------VSTSELLEFFKAVAVKHLPGVGYRLQSQLTDMGIETCEQLQ 489 Query: 208 DTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + ++ F + RG L+ F ++ + ++G R + M + Sbjct: 490 AVSMETLKSKFGVKTGTLLFQHARGSDDKVLQ-FNKVRKSVSAEVNYGIRFKEANDMNKF 548 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQ 317 I + ++LR R +S +K F + + SV+LL T Sbjct: 549 IGQLSEEVEKRLREAGVQGRAVSLKLKVRQKDAPLNPTKFMGHGMCDNITKSVQLLAATS 608 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + I + + G+ +G + Q Sbjct: 609 SAAAISRECCNLAAQLHLVPSDIRGVGIQVGRLEPRPGVQ 648 >UniRef50_A9UNE7 GH11153p (Fragment) n=8 Tax=Drosophila RepID=A9UNE7_DROME Length = 1012 Score = 324 bits (832), Expect = 4e-87, Method: Composition-based stats. Identities = 72/416 (17%), Positives = 138/416 (33%), Gaps = 69/416 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-------------------------- 35 D++ F+ S RP+L G P+ V + G Sbjct: 292 VMHIDMDCFFVSVGLRTRPELRGLPIAVTHSKGGNAATDVPVHPQADRKAELELFAQRFE 351 Query: 36 -----------------------CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+ G++ G + L + Sbjct: 352 HHFHDGDKAEKVRSGFDKKMSLSEIASCSYEAREKGIRNGMFVGQALKLCPELKTI--PY 409 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQR 130 ++E Y +++ + T+ + + +E S DE F +LT + + D+ F +R V + Sbjct: 410 DFEGYKEVAFTLYDTVAQYTLNIEAVSCDEMFVELTDLAHELNVDVMAFVSHLRQEVYSK 469 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T G+A K LA++A AK + L + M+ + +D + G+G Sbjct: 470 TGCPCSAGVAGNKLLARMATKEAKPNGQ-----FLLDSSNDILAYMAPMSLDLLPGVGSS 524 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIIC 249 IS KL G+ D+ +T + + K + + RG L + ++ + Sbjct: 525 ISHKLKQAGLNNCGDVQNTTLEKMEKVLGKKLGQNLFQNCRGIDDRPL-AYEQIRKTVSA 583 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALN 300 +FG R T+ Q +C + ++L + R I+ I TS + + Sbjct: 584 EMNFGIRFTNSVECEQFLCQLSEEVTKRLVEIRRKARSINLKIMVRAAEAPVETSKYMGH 643 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + S + T D I + + G+ L Sbjct: 644 GVCDIINKSSLIKYATDDVNVITTVVLDLMKDADIPPDELRGLGIHLTRLEDANEV 699 >UniRef50_C5CJ42 DNA-directed DNA polymerase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CJ42_KOSOT Length = 424 Score = 324 bits (831), Expect = 4e-87, Method: Composition-based stats. Identities = 90/399 (22%), Positives = 157/399 (39%), Gaps = 26/399 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 A D++AF+AS E P L GKP++V V++ + EAK GVK G P FK Sbjct: 42 IAHVDMDAFFASVEQASNPYLKGKPIIVTGKDTRHSVVVSASYEAKKYGVKAGMPAFKAL 101 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 ++ + + + Y +S +M LE +SPR + SIDEAF DL+ + D + Sbjct: 102 EICPKA--LFVPVDSGKYTYVSEEIMKRLEFISPRYSVASIDEAFIDLSVYHSLSDSINA 159 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + R ++ + ++ +G+A +AK+A+ K + ++ + + Sbjct: 160 LKLFRTSIEKTFGISFSIGVAVNPLIAKIASDFNKPRG------FVVVKEGSEKAFLQNV 213 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG-EPCLQLE 238 + V GIG KL+ G K +L + D F+ +F V+ L +L Sbjct: 214 DISQVPGIGPHTLMKLENFGFKKASELLEADEFFLYHNFGNSFLGLVKSLTVKNYPKELF 273 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + S + + + + A+A ++R R S F+K S F+ Sbjct: 274 FKKEPPKSVGHSMTLNHDVNSIELIERVASFLGAKAVYRMRKYGYQARGTSLFLKYSDFS 333 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QGVA 356 + + L + N + IW G + GV L + V Sbjct: 334 VAR------ITRSLSFYISRPEHLNNVLYWLIREIWN-GEAVRAVGVSLYKLKPVNKNVY 386 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 Q NLF + + V+ L G +++ A Sbjct: 387 QENLF------KKEKDTVEVVLNLQNHFGEYSIFPASIL 419 >UniRef50_C4LI62 DNA polymerase IV n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LI62_CORK4 Length = 512 Score = 323 bits (830), Expect = 6e-87, Method: Composition-based stats. Identities = 85/381 (22%), Positives = 151/381 (39%), Gaps = 23/381 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQKD 60 D++AF+ASCE + RP L G+PV+V + V+A + EA+ GV P + + Sbjct: 27 VLHIDMDAFFASCEQLTRPTLRGRPVLVGGVSGRGVVAGASYEARVFGVHSAMPMMRARR 86 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 L G + +++Y S RVM L E + +E S+DEAF + + + Sbjct: 87 LVGYAG-ITVRPRFDVYKTASRRVMEILREEAGLIEQLSVDEAFMEPDELSGATPDGVRK 145 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + +R + + T L VG K AK+ + AK + ++ Q ++ Sbjct: 146 WAGHLRKRIREETGLPSSVGAGAGKQFAKIGSGLAKPDG------TFVIPVQDQHAILDP 199 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQL 237 LPV +WGIG KL +G++T+ A + +G + Sbjct: 200 LPVRKLWGIGPVAEAKLADIGVRTIEQFARMSRTDVEMALGKTNGPALWLLAQGHDPRPV 259 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 +++ +F + +T + + I + +A +L ++ + R ++ +K + F Sbjct: 260 AP-RAEAKQVSSESTFSDDVTTLDGVDEGIRAALTKAHRRLMNDGRGARTVTVKLKRADF 318 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 ++ S L T D + A+R G + GV L + Q Sbjct: 319 E------RHTRSETLPFSTTDWDVLYRVASRLAADPAVFG-AVRLVGVSLSGL--ESARQ 369 Query: 358 LNLFDDNAPRPGS--EQLMTV 376 LF D P G+ L Sbjct: 370 EALFPDLDPSQGADYRALTEA 390 >UniRef50_B7CAT7 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7CAT7_9FIRM Length = 419 Score = 322 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 83/418 (19%), Positives = 150/418 (35%), Gaps = 22/418 (5%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E V + D + +VV G +A K LGV F+ Sbjct: 5 YLCIDLKSFYASVECVEQGLDPFEVNLVVADPTRGGGAITLAATPAIKKLGVSSRGRIFE 64 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR- 114 + + LY + S RV E + +YSIDE+F D+T Sbjct: 65 ID---PKIEYMITPPRMHLYMEYSCRVYKIFLEFIAKEDIHVYSIDESFLDITNYLKLYQ 121 Query: 115 -DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + + ++I + ++T L VGI LAK+A + K + L+ ++ Sbjct: 122 VNAKELAKKILDRIYEKTGLIATVGIGTNLYLAKIAMDISAKHNADR--IACLNEDLYRQ 179 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 L P+ D W +G ++L +GI + DL I + K F V E + G+ Sbjct: 180 TLWHHTPMTDFWMLGNGTERRLHKLGIYDMYDLCQFPIEILYKEFGVNAEYIIDHAWGKE 239 Query: 234 CLQLEE---FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 +++ + + I S+ E Y + + + L +H + IS Sbjct: 240 PTTIQDIKNYKSKQHSISNSQILFED-YSYKNAFVVMKEMVDQNVLTLTEKHLVTKQISL 298 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 I S + S K+ T ++ R I + ++ + D Sbjct: 299 MIGYSKDCIKPSCG----SCKITNCTNSYSILLEEFKRLYIRIVNPNYPIRQIAISFQDV 354 Query: 351 FSQGVAQ-LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + + +LF D ++L + + + G+ + + KR L Sbjct: 355 KDEYYYENYDLFTDVEKVEREKKLQETLVQIKHRYGKNAILKGMNALDFATAKKRNTL 412 >UniRef50_B6Q3Z2 DNA damage repair protein Mus42, putative n=5 Tax=Eurotiomycetidae RepID=B6Q3Z2_PENMQ Length = 1167 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 67/400 (16%), Positives = 128/400 (32%), Gaps = 50/400 (12%) Query: 2 FALCDVNAFYASCET-VFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQ 58 D ++F+A+ P+L KPV + + + + N A+A G+K G Sbjct: 368 ILHVDFDSFFAAVSINKHHPELVDKPVAIAHGTGSGSEIASCNYPARAFGLKNGMWMKGA 427 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG--------- 109 D + ++ Y + S + + + V+ SIDEA D+T Sbjct: 428 LDRCPE--LKVLPYDFPAYEEASRQFYDCILAVDGVVQSVSIDEALIDVTMQCLQAGGSD 485 Query: 110 ---------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 R + +R + ++T + VG+ AK+A AK + Sbjct: 486 GRGISEGSIYREQAKADEIATSLRHAIKKKTGCAISVGVGGNILQAKVALRKAKPAGQYQ 545 Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN- 219 + + L V D+ G+ + KL+ +G+K V D+ D + H Sbjct: 546 L------KPDEVLDFIGNLTVQDLPGVAYSLGGKLEEIGVKFVKDMRDLTRERLVSHLGP 599 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 + RG ++ ++ + ++G R T+ + + S + +L Sbjct: 600 KTGAKLYDYARGIDKAEVG-VQTMRKSVSAEINWGIRFTNQTQAEEFVQSLSEELHRRLV 658 Query: 280 SEHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 + ++ + + + SV L T S I A L Sbjct: 659 ENLVKGKQLTIRVMRRSADAPLEPVKHLGHGKCDIFNKSVLLGIATNASDIISKEAIAML 718 Query: 331 DAIWQAGHRYQKAGVMLGDFFS----------QGVAQLNL 360 + + GV + QLN Sbjct: 719 RSFGFTPGDLRGLGVQMTKLEPVKSATGGRLESSQQQLNF 758 >UniRef50_A9BNM1 DNA-directed DNA polymerase n=34 Tax=Betaproteobacteria RepID=A9BNM1_DELAS Length = 437 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 72/387 (18%), Positives = 130/387 (33%), Gaps = 53/387 (13%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND--------------------------- 34 A D++AFYAS E + P L G PVV+ Sbjct: 30 IAHLDMDAFYASVELLRYPQLKGLPVVIGGGRRAHDEALDARYAGRLHEIPVDEFSRLKD 89 Query: 35 ----GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEE 90 G + A+ GV K L + + ++ S + Sbjct: 90 YVGRGVITTATYPARQFGVGSAMGMMKAARLCPQA--ILLPVDFAEVRRFSRMFKEIIVS 147 Query: 91 LSPRVEIYSIDEAFCDLTGVR--NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 ++P +E +DE + D T V R I+ T+ T LT +G+A K LAK+ Sbjct: 148 IAPLMEDRGVDEVYIDFTDVPGGQREGGRVLARLIQKTITDATGLTCSIGVAPNKLLAKM 207 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLAD 208 A+ K + + + + ++ L + GIG + KL ++GI+T+ +LA Sbjct: 208 ASEFNKPNG------ISIVQPDDLQAVIWPLACRKINGIGPKADAKLQSLGIQTIGELAK 261 Query: 209 TDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT---DYPSMR 264 + + + F G + + + +F + D + Sbjct: 262 QSLPQLVQWFGRAYGNWLHGVSWGRDERPVVTHSEPV-SMSRETTFERDLHAVRDRAELS 320 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 R A+ L+ + R + ++ F + L P D+ + Sbjct: 321 AIFTDLCERLAQDLQRKGYMGRTVGIKLRYDDFK------TATRDHTLELPMADAATLRR 374 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFF 351 AA + L + R + GV +G+ Sbjct: 375 AAGQCLKRV-PLAKRLRLLGVRVGNLV 400 >UniRef50_A4QFK8 DNA polymerase IV n=28 Tax=Actinomycetales RepID=DPO4_CORGB Length = 467 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 88/371 (23%), Positives = 152/371 (40%), Gaps = 21/371 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQKD 60 D++AF+ASCE + RP L G+PV+V + V+A + EA+ G + P + K Sbjct: 5 VLHIDMDAFFASCEQLTRPTLRGRPVLVGGVSGRGVVAGASYEARKFGARSAMPMHQAKA 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 G V + + +Y+ S RV +E+ + VE SIDE F + + ++ Sbjct: 65 RV-GFGAVVVTPRHIVYSAASRRVFQIVEKRAGIVERLSIDEGFMEPEALVGATPEEVKQ 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + E+RA + + T L VG K +AK+ + AK V + +++Q L+ Sbjct: 124 WAEELRAEIKEVTGLPSSVGAGSGKQIAKIGSGEAKPDG------VFVVPVDKQHDLLDP 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 LPV +WG+G KL +MG++T+ DLA + + RG + Sbjct: 178 LPVGALWGVGPVTGSKLASMGVETIGDLAALTQKEVEISLGATIGISLWNLARGIDDRPV 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E ++I ++ + + + AI A A +L + + R +S ++ + F Sbjct: 238 EP-RAEAKQISQEHTYEKDLLTRQQVDAAIIRSAEGAHRRLLKDGRGARTVSVKLRMADF 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S S L T D + A R + GV + Q Sbjct: 297 RIE------SRSYTLSYATDDYATLEATAFRL-ARYPGEVGPIRLVGVSFSGL--EESRQ 347 Query: 358 LNLFDDNAPRP 368 LF + + Sbjct: 348 DILFPELDQQI 358 >UniRef50_B0R4P0 DNA polymerase IV n=7 Tax=Halobacteriaceae RepID=DPO4_HALS3 Length = 411 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 86/373 (23%), Positives = 136/373 (36%), Gaps = 28/373 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN-----NDGCVIARNAEAKALGVKMGDPW 55 + D++ FYASCE P L G PVVV G V + EA+ GV+ Sbjct: 17 IVVHVDMDCFYASCERRREPALRGAPVVVGMGYEPDQTVGAVATASYEAREYGVESAQAI 76 Query: 56 FKQKDLFRR--------CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 + R + Y +S V L L V SIDEA+ D+ Sbjct: 77 SAALERLPRKADAPDASAAGYYRPVDMAYYESVSESVSEILHGLGDPVREVSIDEAYLDV 136 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 T FGR I+ + + + VGIA + AKLA+ K + + Sbjct: 137 TDRTAWDVAAGFGRHIKQRIARSVGVPASVGIAPDMSTAKLASDHEKPDG------LVVV 190 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 E + ++ L V D+ G+G ++ L GI+TV +LAD D + F R Sbjct: 191 PPESVQSFLAPLDVADLHGVGPVHARALRERGIETVGELADADPYVLEAAFGERGREFHR 250 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 RG +E + + SF + +R+ + + A++ + R Sbjct: 251 RARGADSRPVEP-RGKPKSLSRESSFDGATESFDRVREQAAALSGAVADRASRTNASYRT 309 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 I + T P+ + + + L P D + + LD G +K GV + Sbjct: 310 IGVKVVTPPYDVQ------TRAESLPGPVDDPALLEAVSQSLLDEF--EGAAVRKVGVRV 361 Query: 348 GDFFSQGVAQLNL 360 + Q L Sbjct: 362 SNLVFSEREQATL 374 >UniRef50_C1F7T1 ImpB/MucB/SamB family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7T1_ACIC5 Length = 441 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 102/419 (24%), Positives = 171/419 (40%), Gaps = 27/419 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+N+++AS E RP+L +P+ V+ C IA + EAKA GV+ G + + Sbjct: 24 WLFLDLNSYFASVEQQLRPELRNRPIAVVPVKAETTCAIAASYEAKAYGVRTGTQVAEAR 83 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 L G+V + +E Y D R++ +E+ P + SIDE C L G R D Sbjct: 84 RLCP--GIVFVEARHEAYVDYHKRIVEAVEQCVPVAAVCSIDEMACRLLGREQPLRHALD 141 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 RE++ ++ +R L VG+A + L+K+A+ K + + + Sbjct: 142 LAREVKGSIRRRVGETLRCSVGLAPNRYLSKVASDMDKPDG------LVALTPDILDTAL 195 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCL 235 L D+ G+G R+ K+L GI T+ +L D +R+ + V E+ LRGE Sbjct: 196 RRLVPRDLPGVGARMEKRLHEAGIHTMDELLALDRDGMRRAWGSVNGEKLWHWLRGEDFH 255 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 E + I S + +AA +LR+ + +S +K + Sbjct: 256 DAELEHN--KSISQSHVLPPELRSVEGAYAVAHKLLHKAAMRLRTARLWTTHVSLTLKFA 313 Query: 296 PFALNEPYYGNS-------ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK---AGV 345 S A + QD++ ++ A + + + G +QK GV Sbjct: 314 VPKSEAHRKHYSGIPQLGWAQGTTVIECQDNQTLVEALRKLWE-LRPTGPAHQKPFFVGV 372 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 LG+ + L+LF L T +D +N K G TL A + + R Sbjct: 373 WLGNLVPDHLHTLSLFSSLETEARRTSLTTTIDRVNLKYGLDTLAPASMLLAKAAAPTR 431 >UniRef50_A8VWB3 DNA-directed DNA polymerase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VWB3_9BACI Length = 421 Score = 320 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 88/416 (21%), Positives = 149/416 (35%), Gaps = 21/416 (5%) Query: 3 ALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEA-KALGVKMGDPWFK 57 D+ +FYAS D V V+ D V+A + E + +K G+ F+ Sbjct: 12 FCIDMKSFYASIACRKHGLDPLKACVAVVGAEDFDGSIVLAASPEMKRRFQIKTGNRRFE 71 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGV-RNCR 114 + + Y D+S + + L + +YS+DE F T V R+ Sbjct: 72 IPK---HPDIRIIDAEMMNYLDVSVAITALLRRYFAPKDIFVYSVDEVFISFTPVHRHWH 128 Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + I+ +++ T + +GI L+KL + K + + G+ + + K Sbjct: 129 SPEEAACYIQRKIMRETGVPSVIGIGDNMLLSKLCLDLSAK--KTSSGIGRWRYEDVEEK 186 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEP 233 L D+WGIG R K+L MG++TV D++ + + F + G Sbjct: 187 LWPH-AARDMWGIGSRTGKRLRHMGVRTVGDISRAGEERLIREFGPAIGSQLYWHSLGVD 245 Query: 234 CLQLEEFAPTKQ-EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 +L AP I + Y ++ I + + R R + + Sbjct: 246 LTRLAPEAPKGDISISNGQILMRD-YSYEDVKVIILEMSEEVGRRTRQTGLMGRTVGLSV 304 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 E G + SV L + T + + AA LD ++ V LG+ Sbjct: 305 GY----GRETGGGFNRSVSLPSATNATTVLYRAALDLLDRHMLCDLPARQVTVSLGNLEP 360 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 QL L D+ QL +MD + K G L A + R L+ Sbjct: 361 DRYVQLTLLDEERISEKERQLGYIMDCIREKHGSNALLRAVSLTEAGTARHRNELT 416 >UniRef50_B9LT67 UMUC domain protein DNA-repair protein n=3 Tax=Halobacteriaceae RepID=B9LT67_HALLT Length = 476 Score = 320 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 88/417 (21%), Positives = 152/417 (36%), Gaps = 54/417 (12%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D++ FYASCE + RP+L +P+VV G V + EA+A GV+ P Sbjct: 20 IVFHVDMDCFYASCERLRRPELADEPLVVGMGYEAGEAIGAVATASYEARAFGVESAMPI 79 Query: 56 FKQKDLFRRC---------------GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSI 100 + DL R + + Y ++++ V + L + + + S+ Sbjct: 80 SEALDLLPRRVNADPDDPDAPDPDEAGRYLPVDLDFYKEVASDVKTVLRDCADVLREVSV 139 Query: 101 DEAFCDLTGVRNCRDL----------------TDFGREIRATVLQRTHLTVGVGIAQTKT 144 DEA+ D+T + R I+ + + + VG+A + Sbjct: 140 DEAYLDVTDRTAWDAAGGESTATGPAETRTLAEGYARHIKERIEREAGVPASVGVAPNMS 199 Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVL 204 AK+A+ A K + + +++LP ++ G+G + L +GI+T Sbjct: 200 TAKIASDADKPDG------LVVVPPGEVESFLASLPTAEIHGVGPVTERTLAELGIETAG 253 Query: 205 DLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 DLA D + R RG+ ++ + + S D R Sbjct: 254 DLAAADPDRLADELGDRGRELYRRARGDDDREVTPTGLP-KSLSRESSLS-ATADEERKR 311 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 + + + AA A + R R I A+ PY N+ + L P D + + Sbjct: 312 ETVRALAADVARRARERGCLYRTIGIK------AVEPPYEVNTRARSLPGPVDDPDLVES 365 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL--FDDNAPRPGSEQLMTVMDT 379 A L AG R +K GV + Q L FD + G+ + D Sbjct: 366 VALDLLGEF--AGDRVRKLGVRVSKLDFAESDQATLGGFDASGGGRGTAGGDSGADR 420 >UniRef50_C6WX69 DNA-directed DNA polymerase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WX69_METML Length = 409 Score = 320 bits (820), Expect = 8e-86, Method: Composition-based stats. Identities = 92/397 (23%), Positives = 164/397 (41%), Gaps = 25/397 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D N+++AS E P+L GKP+ VL+ C IA + EAKA G+K G + + Sbjct: 6 LYVDFNSYFASVEQQLVPELRGKPIGVLAVMAETTCCIAASYEAKAFGIKTGTLVSEARK 65 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L ++ + +Y + ++ +E + ++ SIDE C LTG + D Sbjct: 66 LCP--DIIFVEARPPVYVQYHHFLIDIVESCTHVEKVLSIDEMVCKLTGSQQQPDNALKL 123 Query: 120 GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +I++ + ++ + +GIA LAK+A++ K L + + Sbjct: 124 AAKIKSVLAEKAGSFIRCSIGIAPNTYLAKVASNMQKPDG------CVLIVFNELPQRLY 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 L + D+ GIG+++ +L+ I TV L + + ++ + V ER +LRG Sbjct: 178 GLKLRDLNGIGKQMEARLNRYKITTVEQLYAANRQQLQVAWGSVEGERMYDKLRGIEPYY 237 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + S + +R + +A ++RS IS +K Sbjct: 238 V---KNARSSLGHSHVMPPEQRNEVGVRAVLHRLLQKACMRMRSYDLLASRISVKVK--- 291 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + SA L+PT ++ +I A + GV + Sbjct: 292 FRNKPSWQKESA----LSPTDNTLRLIEALEAFMQHYPVTDAEPYAVGVSFSGLVTADEV 347 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 +LF AP +L +D+LN+K G+ T+YF G Sbjct: 348 ARDLF-QVAPLENERKLNQAIDSLNSKFGKNTIYFGG 383 >UniRef50_C3WGR0 DNA polymerase IV n=6 Tax=Fusobacterium RepID=C3WGR0_9FUSO Length = 352 Score = 319 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 75/367 (20%), Positives = 149/367 (40%), Gaps = 19/367 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFYAS E P L KP+VV N V + EA+ G+ K Sbjct: 4 IIMHYDMDAFYASIEINRNPKLKNKPLVVGEN---IVTTASYEARKYGIHSAMKVSDAKL 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + ++ + + Y +SN + + + +++ +VE + DE + DLTG+ + F Sbjct: 61 LCPK--LIAIPVDKKEYIRISNEIHNLILKITNKVEFIATDEGYIDLTGIVKPENKKQFA 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + + + T+LT VGI K AK+A+ K + G+ N + + +S Sbjct: 119 LKFKERIKELTNLTCSVGIGFNKLSAKIASDINKPF-----GIYIFENEKDFVEYISDKK 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEE 239 + + G+G++ + L I V D+ + ++ K + E +RG ++E Sbjct: 174 IKIIPGVGKKFFEILKHDKIFLVKDVFKYSLDYLVKKYGKSRGENLYCSVRGINHDEVEY 233 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 I ++ + + + S ++L + + + ++ I+ S F Sbjct: 234 EREI-HSIGNEETYSIPLQTNSELEREFNSLFEYTYQRLLKNNVFSQSVTVKIRYSSFK- 291 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S KL T+D + N L++ + G+ GD + QL+ Sbjct: 292 -----TYTKSKKLKFATKDKDFLYNEMLELLNSFELED-EIRLLGIYFGDIKRNTLIQLS 345 Query: 360 LFDDNAP 366 + + Sbjct: 346 INESLKK 352 >UniRef50_A4RF27 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4RF27_MAGGR Length = 1201 Score = 318 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 77/410 (18%), Positives = 141/410 (34%), Gaps = 48/410 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+ KP VV N + + N A+ GVK G + Sbjct: 386 IMHVDFDSFFCAVSLKTAPEYIDKPAVVAHGNGTGSEIASCNYPAREFGVKNGMWMKRAL 445 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV--------- 110 +L + ++ Y D S + E+ V+ S+DEA D+T + Sbjct: 446 ELCP--TIKVLPYDFPAYEDASRLFYGAILEIGGIVQSVSVDEALIDITTLVLEASSSSG 503 Query: 111 ---------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + ++RA + +RT V +G+ +AK+A AK + Sbjct: 504 VGVDEGSVWREQEKANELAADLRAEIKRRTGCNVSIGMGPNILMAKVALRKAKPAGQYQ- 562 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 E ++S L V+D+ G+ I KL+ +G++ V D+ + + Sbjct: 563 -----VKPEEILDILSGLKVEDLPGVAYSIKNKLEEVGVRLVKDVRELSRGRLTTILGPK 617 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 ER RG ++ + P ++ + ++G R P + + + ++L S Sbjct: 618 TGERLWEYSRGIDKAEVGDQ-PMRKSVSAEVNWGIRFVSQPEAEEFVMNLCKELEKRLLS 676 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 E + + I + + SV T + I A L Sbjct: 677 EGVKGKGFTMKIMRRSLDSPLDPPKHLGHGKCDVFNKSVAFGIATYSADFIGKEAVSILR 736 Query: 332 AIWQAGHRYQKAGVMLGDFFS--------QGVAQLNL-FDDNAPRPGSEQ 372 + A + GV L +Q L F A S++ Sbjct: 737 SYNFAPGDLRGLGVHLSRLEPVKGPAAGVPESSQKTLSFGAFARASSSKK 786 >UniRef50_B0D2Y9 Predicted protein n=3 Tax=Agaricales RepID=B0D2Y9_LACBS Length = 1152 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 84/390 (21%), Positives = 145/390 (37%), Gaps = 44/390 (11%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA--------RNAEAKALGVKMG 52 + CD + F+ S V RP+ GKPVVV + A + EA+ G+K G Sbjct: 382 VIMHCDFDCFFVSAGLVSRPEHKGKPVVVCHSQGTQGGASSTSEIASSSYEARKFGIKNG 441 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR- 111 + + L G++ +E Y S + L + ++ S+DEA D+T Sbjct: 442 MSLQQARKLCP--GIITIPYEFERYKQFSLLFYTVLMSHADDLQAVSVDEALIDVTSTVT 499 Query: 112 ----------NCRDLT-DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 + D DF IRA + + T + +GI+ LA+LA AK Sbjct: 500 QLRSHVGLEGSPHDPAKDFAETIRAQIRKATSCEISIGISHNILLARLATRRAKP----- 554 Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFN 219 GG L L+ ++ L + D+ G GR +K + +G+ T+ +LA + Sbjct: 555 GGSFHLVPLD-VPDFLAPLDIADLHGFGRSTKQKAQEKLGVTTLGELAKKSKGVLIDALG 613 Query: 220 V-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 E +RG +L E ++ + C ++G R + + AA ++L Sbjct: 614 KATGETLYDAVRGIDDKKL-ESDKPRKSVSCEINYGIRFENNEQAEAFVHQMAAEVKKRL 672 Query: 279 RSEHQYCRFISTFIKTSP---------FALNEPYYGNSASVKLLTP----TQDSRDIINA 325 + R I+ + F + + + L+ P T D + I Sbjct: 673 DAIDMVGRSITMKVMKRDPTAPVEPPKFLGHGSCDLFNKQIPLIGPGGRATSDEQIIGEH 732 Query: 326 ATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 A R L + + G+ + S Sbjct: 733 AWRLLKSFNFDPKELRGLGIQVQKLESASS 762 >UniRef50_A0QHM7 DNA polymerase IV 1 n=8 Tax=Corynebacterineae RepID=A0QHM7_MYCA1 Length = 458 Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 101/392 (25%), Positives = 162/392 (41%), Gaps = 27/392 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E + RP L G+PV+V V+A + EA+ G + P + K L Sbjct: 2 LHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQAKRL 61 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDF 119 V +Y S RV T+ + P VE S DE F + + D+ F Sbjct: 62 V-GVSAVVLPPRGVVYGVASRRVFDTIRAVVPVVEQLSFDEGFGEPAQLAGAPAEDVEAF 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++R V ++T L VG K +AK+A+ AK V + +R+L+ L Sbjct: 121 CEQLRRRVREQTGLIASVGAGSGKQIAKIASGLAKPDG------VRVVRRAEERELLGGL 174 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 PV +WGIG +KL +GI+T+ +LA R RG + Sbjct: 175 PVRRLWGIGPVAEEKLHRLGIETIGELAALTDAEAANILGATIGPALHRLARGIDDRPVA 234 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E ++I +F +T +R+AI A A +L + + R ++ +K S + Sbjct: 235 E-RAEAKQISSESTFAADLTTLEQLREAIEPIAEHAHHRLLRDGRGARTVTVKLKKSDMS 293 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S L T ++ ++ A R L + G + GV V Q Sbjct: 294 ------TLTRSATLPYATTEAAALVGVARRLLLDPREIG-PIRLLGVGFSGLS--EVRQE 344 Query: 359 NLFDD---NAPRPGSEQLMTVMDTLNAKEGRG 387 +LF D AP+ S+ + T + + G G Sbjct: 345 SLFPDLEMPAPQSDSQSVETAAEAM---FGPG 373 >UniRef50_C4FT17 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=C4FT17_9FIRM Length = 423 Score = 317 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 91/415 (21%), Positives = 153/415 (36%), Gaps = 18/415 (4%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAKA-LGVKMGDPWF 56 D +F+AS E V R D + V+S G V+A + K+ G+ G + Sbjct: 14 ILCIDCKSFFASIECVERGLDPLTAKLCVVSRPHLKGGLVLASSPRMKSEYGIGTGSRVY 73 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR 114 R +V + LY ++ + + + +YSIDEAF D+ Sbjct: 74 DLPK--RDSDIVLAPARMNLYVQRNHDINQIFLQYVAWEDLHVYSIDEAFLDVGRSHALF 131 Query: 115 DLT-DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 +I+ + +R L VGI LAKL K++ S Sbjct: 132 GSNYQIAWQIQHEIYKRYGLPTCVGIGDNLLLAKLCLDNVAKYRSPYLAY--WSYARIPE 189 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + + D WGIGRR L++MGI +V DLA D+ ++ F V G Sbjct: 190 TVWKIEKLSDFWGIGRRTQTSLESMGIYSVKDLAHADLGKLKARFGVKGAELYYHANGLD 249 Query: 234 CLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + E ++P Q S+ DY + + A A +LR E + + I Sbjct: 250 ASVIREAYSPQSQVYSASQILERNYLDYRQVALVVREMADNLASRLRREGRMTSCLGLGI 309 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + + G + T S+ ++ + L + + + + + Sbjct: 310 GYGKDIVPKRSGG---QMTFEL-TSSSKQLMAHSQTLLKRHYFR-LPVKSLHLTVSHLQA 364 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 G QL+LF D E+ V+D + + G G+L A + ++RA L Sbjct: 365 AGSIQLSLFQDPEQSAQEERAERVVDAVRERYGYGSLVRASSLLPGATAIQRADL 419 >UniRef50_A1SN18 DNA-directed DNA polymerase n=13 Tax=Actinomycetales RepID=A1SN18_NOCSJ Length = 362 Score = 317 bits (813), Expect = 5e-85, Method: Composition-based stats. Identities = 93/365 (25%), Positives = 142/365 (38%), Gaps = 26/365 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN----DGCVIARNAEAKALGVKMGDPWFK 57 D++ F A+ E + RP+L G+PVVV G V + EA+A GV G P Sbjct: 10 VLHVDLDQFIAAVEVLRRPELAGRPVVVGGRGDPTERGVVATASYEARAFGVGSGMPLRV 69 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL----SPRV-EIYSIDEAFCDLT-GVR 111 V + E Y S +VM+TL L P V E+ DEAF Sbjct: 70 AARKCPDA--VFLPVDKEAYDAASAQVMTTLRGLEWGGVPVVLEVLGWDEAFLAAGEDHG 127 Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + +F +RA VL T L VGI K AK+A K D Sbjct: 128 ELGNPREFAEHLRAEVLAETRLHCSVGIGDNKLRAKIATDFGKPRGVWQLTEADWFP--- 184 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL-R 230 +M P +WGIG R +KKL A+GI TV LA +D R + + L R Sbjct: 185 ---VMGERPTTALWGIGARTAKKLSALGIDTVEQLARSDARVLAAELGPTMGPWFHRLGR 241 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G ++ + ++ E + D+ + + + + R + + E + + Sbjct: 242 GVDTSPVDATPWVPRAHGREETYQEDLEDWDRVTEEVRALTRRVVDDIDREGRPAARVGI 301 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 ++ PF+ S S+ L P+ D + +AA L+ + + G + GV L Sbjct: 302 KVRYRPFS------TVSRSLTLPEPSNDPAVLEDAAVSLLERV-ERGRPVRLLGVRLEMV 354 Query: 351 FSQGV 355 Sbjct: 355 DPPEG 359 >UniRef50_O74944 DNA polymerase kappa n=1 Tax=Schizosaccharomyces pombe RepID=POLK_SCHPO Length = 547 Score = 317 bits (813), Expect = 5e-85, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 138/362 (38%), Gaps = 25/362 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AFYAS E + P L P+ V + N A+ GV+ P F + Sbjct: 131 IIVHVDCDAFYASIEELKNPKLKSLPMAVG---KSVLCTANYVARKFGVRSAMPEFIARK 187 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL---- 116 + +V N YA S + + L + + SIDE + +LT ++L Sbjct: 188 ICP--DLVVIPLNLSEYAIKSKEIQNVLAQYDSNLCPASIDEFYMNLTSHLRLQELAFTV 245 Query: 117 ---TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 T +IR V + T +TV GIA K LAK+A++ K + + Sbjct: 246 ENITMVVEKIRKQVHEETGVTVSCGIAANKLLAKIASNKRKPNNQF----FIPFDEIGIS 301 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 K M+ LPV +V GIGR + ++L + IKT D+ + + +R G Sbjct: 302 KFMNDLPVREVSGIGRVLEQQLLGLEIKTCGDIQRNLVILSYIFLPKSFQNLLRCSYGFG 361 Query: 234 CLQLEEF-APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 L+E+ ++ I +F ++ + + +E L+ I+ Sbjct: 362 TTILDEYGESKRKTIGSEATFSSNLSSPSIIEYKLRLLVQNVSENLQKRGLVTNSIAIKY 421 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 KTS F ++ + + D++ A + L + + GV S Sbjct: 422 KTSEFQVH------TKQKSIGQFIHSESDLLKPALQLLRQSY--PMTIRLLGVRATKLVS 473 Query: 353 QG 354 + Sbjct: 474 KS 475 >UniRef50_A9V4K7 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V4K7_MONBE Length = 1412 Score = 317 bits (813), Expect = 6e-85, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 124/388 (31%), Gaps = 56/388 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + D++AF+ S R +L +PV + + + + N A+ G++ G + Sbjct: 322 VIVHIDLDAFFVSIALRERQELQDQPVAIAHSGREGSSEISSCNYPARQFGIRNGMSMRR 381 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC---- 113 + ++ Y S L + R++ S+DEA+ DLTG+ Sbjct: 382 ALAACPH--LQTLPYEFDKYKLASQAFYRLLTARTLRIQAVSMDEAYLDLTGLVRPDYSP 439 Query: 114 -------------------------------RDLTDFGREIRATVLQRTHLTVGVGIAQT 142 + T+F E+R + + + GI Sbjct: 440 HLWQAVQQRQHEGHPPLSPAPLQEASLPVPTQSATEFVAELRTAIAEELGIAASAGIGPN 499 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 LA+L AK + + + + D+ G+G + +L MGI + Sbjct: 500 VLLARLCTRLAKPNGLYSYA------EANVERFIDQTALKDLPGVGWCTAGRLTTMGIAS 553 Query: 203 VLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 DL + ++ F + RG L++ AP + + ++G R Sbjct: 554 CADLRALPLDRLQADFGHKNGQALYNACRGIDPSPLKDNAPP-KSVSVEITWGVRFDKDA 612 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIK--------TSPFALNEPYYGNSASVKLL 313 + + + +L + Q ++ IK + P + S L Sbjct: 613 QVDTFVSNLCREVCSRLEAVGQLATRVTLKIKQRKPDAGDPHKRLGHGPCDDRNRSTALP 672 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQ 341 +PT D I + + Sbjct: 673 SPTDDLATITATCLELTHLLAVPVLDVR 700 >UniRef50_Q4KWZ7 REV1 protein n=9 Tax=Euteleostomi RepID=Q4KWZ7_CHICK Length = 1255 Score = 317 bits (812), Expect = 7e-85, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 117/328 (35%), Gaps = 21/328 (6%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + + + EA+ G+K G + + K L + S ++ Y +++ V L + +E Sbjct: 519 IASCSYEARQAGIKNGMFFGQAKKLCP--NLQAVSYDFNAYKEVAQTVYEILASYTHNIE 576 Query: 97 IYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DEA D+T + + IR + +T T VG+ LA++A AK Sbjct: 577 AVSCDEALVDITEILTETRLTPDELANAIRDEIKAQTKCTASVGMGSNILLARMATRKAK 636 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + E + V ++ G+GR + KL ++GI+T DL + + Sbjct: 637 PDGQYHL------KPEEVDDFIRGQLVTNLPGVGRSMESKLASLGIRTCGDLQCASMSKL 690 Query: 215 RKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 +K F + R RG + ++ + ++G R T + S + Sbjct: 691 QKEFGPKTGQMLYRFCRGLDDRPVRTEK-ERKSVSAEINYGIRFTQPKEAEAFLLSLSEE 749 Query: 274 AAEKLRSEHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 +L + + ++ I + + + + +V L T ++ I Sbjct: 750 IQRRLEAAGMKGKRLTLKIMVRKAGAPVEPAKYGGHGICDNIARTVTLDHATDSAKVIGK 809 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + + G+ + Sbjct: 810 ETLNMFHTMKLNISDMRGVGIQVQQLVP 837 >UniRef50_A6C5Y5 UMUC-like DNA-repair protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C5Y5_9PLAN Length = 405 Score = 316 bits (811), Expect = 9e-85, Method: Composition-based stats. Identities = 110/397 (27%), Positives = 164/397 (41%), Gaps = 22/397 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D + FY SCE + L G P VL N CVIA++ E KA GVK G P ++ K Sbjct: 5 LIGHIDSDCFYVSCERIRSYSLRGVPCGVLGNQGACVIAKSYELKAYGVKTGHPIWEAKK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTD 118 L V ++ Y +S R++ L+ +SP VE YSIDE F D + ++ L Sbjct: 65 LCPHA--VFVKRDFRWYEVISRRLLDLLKTVSPLVEYYSIDEMFFDASELQRYFRLPLEA 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R ++ V + + V +GIA +++LAKL + AAK + Q + + + Sbjct: 123 ATRALQTLVQEEIGVPVSIGIAPSRSLAKLGSDAAKPFGIQVI-------ERDCERFLRS 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 PV ++ GIG R +KL I T D D IR + E ELRG+ ++ Sbjct: 176 QPVGELCGIGSRSERKLRDRNIHTCWDYRQADRLLIRNLLTIKGEALWWELRGDAVNPIQ 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 P + I S G + D +R R E L Y R IS I Sbjct: 236 TTRPPHKAIARGGSCGGKTMDADRIRAWAVRNIERLIEALDHHRVYARHISLQI-----D 290 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 N+ + L P+ R I +A L A H ++ + + Q Sbjct: 291 ANKTALWLGRT-PLAVPSASFRMIYDAVMPML-ATAPTTHPVSHMHIIAENLTWRDRIQK 348 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 +LF ++A P L + +N K GR + A Sbjct: 349 SLFFEDAQSP----LDQIKRDINQKLGRFAIRSAETL 381 >UniRef50_C8W7V4 UMUC domain protein DNA-repair protein n=12 Tax=Bacteria RepID=C8W7V4_ATOPD Length = 447 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 93/431 (21%), Positives = 154/431 (35%), Gaps = 33/431 (7%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + + D+ +FYAS E V R D +VV +A + +ALGV F+ Sbjct: 8 YLVIDLKSFYASVECVERGLDPMKAKLVVADLTRTEKTICLAVSPALRALGVPGRCRVFE 67 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCRD 115 LY + S V S + + +YSIDEAF D+T + Sbjct: 68 IPK---NLTYEVAPPRMALYIERSADVYSVYLKYIAPEDIHVYSIDEAFIDVTPYLSLYG 124 Query: 116 --LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + G +IRA V + T + G+ LAK+A K G +L + Sbjct: 125 CTARELGEKIRADVAKTTGIPATCGLGPNLYLAKIALDITAKHSPNFFG--ELDEESYKL 182 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 KL + P+ D W IG I K+L+AM I T+ LA I + K F V E + G Sbjct: 183 KLWNHKPLTDFWHIGTGIQKRLEAMNIHTMGQLAMAPIEPLYKEFGVDAEILIDHAWGIE 242 Query: 234 CL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 ++ + + ++ F D R +L ++ C I Sbjct: 243 PTTIADIKNYKSQSHSVSTAQVFDHN-RDTEGARFIFKEMVEALTLELVTQKLVCSSIGI 301 Query: 291 FIKTS-------------PFALNEPYY-GNSASVKLLTPTQDSRDIINAATRSLDAIWQA 336 +I S + + +S + KL+ PT +++ D Sbjct: 302 YIGYSATESQMEELRKTGDYRSWRRHIPSSSGTKKLIYPTNSRDELMAEVLSFFDERVLP 361 Query: 337 GHRYQKAGVMLGDFFSQ--GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 + G+ G+ + Q +LF D Q ++ + K G+ +L A Sbjct: 362 SESVHRVGLTFGNTQEETNSGIQTSLFQDTYGLEKERQRQDTINAIKKKFGKNSLLKAMD 421 Query: 395 GIQQQWQMKRA 405 + + +R Sbjct: 422 LLSEATARQRN 432 >UniRef50_Q5K8U2 Putative uncharacterized protein n=3 Tax=Agaricomycotina RepID=Q5K8U2_CRYNE Length = 658 Score = 315 bits (809), Expect = 2e-84, Method: Composition-based stats. Identities = 72/354 (20%), Positives = 130/354 (36%), Gaps = 28/354 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E P L GK V G + + EA+ GV+ F K L Sbjct: 221 IIHVDMDAFYASVEVQRDPSLKGKAFGVG---KGVLCTASYEARKFGVRSAMAGFIAKKL 277 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 ++ +++LY S V L + + + S+DE + ++T + + ++ Sbjct: 278 CPH--IILTDLHFDLYTKASKAVKEVLVQYDENLMMASLDEGYLNITPYMSTHNMTASEV 335 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIRA V ++T LT+ GIA + LAK+ + K + + M L Sbjct: 336 VTEIRAQVEEKTSLTISAGIAANRMLAKICSDKNKPNGHFELAF----DRATIVRFMRDL 391 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV ++ G GR + L+ +GI+T D+ + + + R G + Sbjct: 392 PVRNIPGFGRVTERCLEGLGIQTCGDIYEKRVDLLLMDHWFGFRGLCRAYLGIADNTVAP 451 Query: 240 -FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F TD + + + L + ++ K Sbjct: 452 GRREERRSVGVERTF-RDKTDDEDIMATLIDIVEELGKDLDRLQYAGKTVTVKYK----- 505 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + + + + DI+ A L + R + GV L Sbjct: 506 --------TRAKSIPKYISSATDILPIAQELLKK--ELPLRIRLLGVRLSTLKD 549 >UniRef50_Q03AC9 Nucleotidyltransferase/DNA polymerase for DNA repair n=19 Tax=Bacilli RepID=Q03AC9_LACC3 Length = 435 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 94/417 (22%), Positives = 154/417 (36%), Gaps = 16/417 (3%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLS----NNDGCVIARNAEAKA-LGVKMGDPW 55 L D +FYAS E++ R + +VV+S N G ++A + AK G+K Sbjct: 13 VFLIDNKSFYASVESIERGLNPLRTLLVVMSEQENTNGGLILATSPMAKKIYGLKS--NV 70 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNC 113 +Q+DL ++ LY + + E + YSIDE+ DLT Sbjct: 71 SRQRDLPVDKHLIVVPPRMNLYIKKNLAINDIFREFVANEDLWPYSIDESILDLTHTWRL 130 Query: 114 RD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + I+ T+ R L VGI AK+A K G +S Sbjct: 131 FGKTPRAVAQLIQHTIRHRLGLYTTVGIGDNPLQAKIALDVYAKHDPNLIGQ--ISYQTV 188 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + DVW IG+R + L MGI T+ LA + +++ ++ + G Sbjct: 189 PDTIWQITNMTDVWSIGQRTAAHLARMGITTMKQLAHANPYALKQELGIIGTQLFALAWG 248 Query: 232 EPCLQLEEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 ++ E T+ I S+ ++ + I + A +LR H+ IS Sbjct: 249 IDRTKISERVITREPSIGNSQVLPRDYSNQVEIEIVIKEIGEQVAARLRHHHKRAGEISL 308 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 I S + G K + PT D++ W G + V G Sbjct: 309 GIGFSYAESEKDGRGGFHQTKRILPTNRDGDLVATLQLIFRQNWH-GEVIRNVAVYTGRL 367 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QLN F+ + + L +DT+ + G L +A + ++RA L Sbjct: 368 APDTGEQLNFFEPVDQQIKATNLERTLDTIRDRFGFKGLIYAKSAMHGGTAIQRASL 424 >UniRef50_C1XFZ1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XFZ1_MEIRU Length = 419 Score = 314 bits (806), Expect = 4e-84, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 160/410 (39%), Gaps = 27/410 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAF+AS E RP+L GKPV V+ C IA + EAK G+K G + Sbjct: 16 YLFLDMNAFFASVEQQLRPELRGKPVAVVPMLAETTCCIATSYEAKRYGIKTGTLVQDAR 75 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 L G+ + Y + ++++ ++ + P + SIDE C L G + Sbjct: 76 LLCP--GLELVEARPREYIRVHHQILQAVDSVLPVEAVLSIDELVCKLMGREREPENALQ 133 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 GR+++ + +R L VG+ + LAK+A K + L + Sbjct: 134 LGRQVKEAIYRRVGGQLRCSVGLGPNRFLAKVAAEMHKPDG------LTLLQPSDLPHRL 187 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN--VVLERTVRELRGEPC 234 +L + D+ GIG + ++L G+ TV L + + + V LRG Sbjct: 188 YSLQLRDLPGIGPGMERRLFKHGVTTVEGLYRLSALQLAQVWGSRVHGLAWWHRLRGAD- 246 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 L E ++ + S + R + RAA +LR E + ++ F++ Sbjct: 247 --LPETPTRRRSLGHSHVLPPALRSEAGARAVLTRLVHRAAARLRHEGYWAGSLALFLRF 304 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + P+QD+ ++ + G + K G+ LG Sbjct: 305 LDGGEQRKWEAQIR----IQPSQDTLTLLRVSLGLWQQK-PEGTPF-KVGIALGHLTPAL 358 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 LF+ +L MD N+K G LYFAG +Q + R Sbjct: 359 ELSEPLFES---EQKLVRLAQAMDKANSKYGPQALYFAGMHRTEQSAVTR 405 >UniRef50_A2DLM9 ImpB/MucB/SamB family protein n=1 Tax=Trichomonas vaginalis RepID=A2DLM9_TRIVA Length = 592 Score = 313 bits (804), Expect = 6e-84, Method: Composition-based stats. Identities = 87/379 (22%), Positives = 141/379 (37%), Gaps = 22/379 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D+++F+ASCE + P L G V G + + EA+ GV+ G F Sbjct: 88 YLHADLDSFFASCEALRDPSLVGTAFAVGGEIKHGVLSTTSYEARKFGVRSGMAVFIALQ 147 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV--RNCRDLTD 118 L + S+YELY S+ V E+ + +DEA DL+ + D Sbjct: 148 LCPH--LKIVESHYELYKHYSSIVRKIFEKYDSHYISFGLDEASLDLSEHVKLDYEKAMD 205 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I+ V ++T LT+ GIA T LAK+A+ K + E +S Sbjct: 206 IAKNIQKEVFEQTKLTISCGIAITPQLAKIASDVNKPNGIFEIK----HDRESTLDFISK 261 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + GIG + L +GI T+ D+ D + + G Q Sbjct: 262 LPIRKIPGIGGVAEQLLHGIGITTMKDVMDKKTDLWICMRPLFCQFIFSACLGI-NRQTF 320 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 +Q I R+F D M + I + L+ + CR ++ K S F Sbjct: 321 GVTRHQQSISKERTFD-NTNDRVFMEEIIEKLCMEVCKLLQEMNVLCRNVTVKFKDSSFQ 379 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSL-DAIWQAGHRYQKAGVMLGDF-FSQGVA 356 + + T DI A + L D + +Y+ GV G + Sbjct: 380 ------TITRCLSFDHDTNKIFDIFCACVKILNDELRSRYVKYRLLGVRCGQLSTPRAKR 433 Query: 357 QLN---LFDDNAPRPGSEQ 372 Q++ +F + Q Sbjct: 434 QISIQTMFKKCEKKQNESQ 452 >UniRef50_Q5Q9H0 Polymerase kappa isoform 9 n=3 Tax=Murinae RepID=Q5Q9H0_MOUSE Length = 467 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 73/344 (21%), Positives = 129/344 (37%), Gaps = 23/344 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P+L KP+ V S + N A+ GV+ P F K L Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGSM--SMLATSNYHARRFGVRAAMPGFIAKRL 159 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + ++ N++ Y +S V L E P S+DEA+ ++T ++ ++ D+ Sbjct: 160 CPQ--LIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNIT--QHLQERQDWPE 215 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 + + + + +GIA LAK+ + K + L + + LP+ Sbjct: 216 D-KRRYFIKMGNYLKIGIAPNTMLAKVCSDKNKPNGQYQ----ILPSRSAVMDFIKDLPI 270 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEF 240 V GIG+ K L A+GI T +L + F+ + G L Sbjct: 271 RKVSGIGKVTEKMLMALGIVTCTELYQQ-RALLSLLFSETSWHYFLHIALGLGSTDL-AR 328 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ + R+F E I+ A A L+ E R ++ +K F + Sbjct: 329 DGERKSMSVERTFSE-ISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVNFEVK 387 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG--HRYQK 342 + + + + +I A L G H + Sbjct: 388 ------TRASTVPAAISTAEEIFAIAKELLRTEVNVGSPHPLRL 425 >UniRef50_P63988 DNA polymerase IV 2 n=20 Tax=Corynebacterineae RepID=DPO42_MYCBO Length = 346 Score = 312 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 87/351 (24%), Positives = 142/351 (40%), Gaps = 21/351 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-----CVIARNAEAKALGVKMGDPWF 56 D++ F AS E + P+L G PV+V N D V + EA+A GV+ G P Sbjct: 9 ILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMPLR 68 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 SN Y S V++ L +L VE++ DEA+ + D Sbjct: 69 TAARRCPEAT--FLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAP-GTPDDP 125 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + EIR +L +T L+ +GI+ K AK+A AK +M Sbjct: 126 IEVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQL------TDANWMAIM 179 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 V+ +WG+G + +K+L +GI TV LA TD + F + +G + Sbjct: 180 GDRTVEALWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRTALWLLLAKGGGDTE 239 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + A + + +F +T M A+ A R ++ + + ++ ++T+ Sbjct: 240 VSAQAWVPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTAT 299 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 F Y + KL P+ D I AA LD +++ + GV L Sbjct: 300 F------YTRTKIRKLQAPSTDPDVITAAARHVLD-LFELDRPVRLLGVRL 343 >UniRef50_A8Z6F4 Umuc domain protein dna-repair protein n=2 Tax=Campylobacter RepID=A8Z6F4_CAMC1 Length = 422 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 88/418 (21%), Positives = 169/418 (40%), Gaps = 24/418 (5%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++A+ D+ +FYAS E V R D + +VV + G +A + +A GVK F Sbjct: 10 IYAVIDLKSFYASVECVERGLDPFKADLVVADASRGSGGICLAVSPALRAKGVKNRCRLF 69 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR 114 + + + Y D + R+ + + +YSIDE F DLT Sbjct: 70 EIPR---DVKFIIAPPRMQFYIDYAARIYEIYLKYVSKEDIYVYSIDECFIDLTSYLKFY 126 Query: 115 --DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + + + +L+ T +T G+ LAK+A K Q G+ L + Sbjct: 127 ALGAKEMAKMMMDEILKTTGVTATCGMGTNLYLAKIALDILAKHQ--DDGIAYLDEELYK 184 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 ++L + P+ D W IG++ KL+ GI + D+A+ + K F V T+ G Sbjct: 185 KQLWTHQPLSDFWRIGKQTRLKLEKCGIFCMKDIANAPKSLLEKIFGVDAYITIDHANGI 244 Query: 233 PCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 +++ + P+ + S + + A R A +L ++ ++ Sbjct: 245 EPTTIAEIKAYKPSTKSYFSSEILPRD-YERCEAVIVLKEMADRLALRLINKDVRASGLT 303 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 ++ + EP ASV+ TPT S +++AA L + ++ G+ D Sbjct: 304 INVRFAD--KLEPQQR--ASVRFKTPTNISSVLMSAAEELLLNKIKNVGLIRQIGISAND 359 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + +A+ +LF+D + ++ ++ + K G+ ++ A + + R Sbjct: 360 VVKENLAEFSLFED---DAKEKAVLKSLNLIKEKFGKNSILRAIDLLPEATGQDRNKK 414 >UniRef50_A9NFG9 DNA polymerase IV n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFG9_ACHLI Length = 383 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 89/375 (23%), Positives = 152/375 (40%), Gaps = 27/375 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + D+NAFYA+C + P L + VV + G V + +A+ G+ G Sbjct: 21 VIFHIDLNAFYATCAMIKEPHLKHRVFVVGGQSSQPRGVVSTASYKARKYGIHAGMSMLD 80 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 + F R ++ +++ Y +MSN+ M L+ S V SIDEAF D+T Sbjct: 81 ALNKFPR--LLIVPVDFKFYREMSNKFMEVLDAYSDLVLQASIDEAFLDMTKASEEIHPI 138 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 ++I+ ++ + L +GIA T LAK+A+ K + + KL+ Sbjct: 139 KLAKKIQKELVDKYQLPTSIGIAPTLFLAKMASDMKKPLG------ITVLRKRDVEKLLY 192 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR----ELRGEP 233 L V D++GIG++ KL A+GI T+ D D+ + K V+ E T + G Sbjct: 193 PLSVTDIYGIGKQTYPKLMALGINTIKDF--MDLSNLPKITRVMKEETYYSFREYILGNS 250 Query: 234 CLQLEEFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 ++ + I +F + + + I S + +L+ + + + + Sbjct: 251 SNVVDPDKYRLPKSISAETTFNTNMDEPSVILDIIMSQLDESLVRLKKYNMLTKTVGFKL 310 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF- 351 K+S F + S L T D I T + ++ G Y+ AG L + Sbjct: 311 KSSDFK------SITRSKTLEDYTNDPEIIKYELTSLFENEFEGGI-YRLAGASLSNLIL 363 Query: 352 -SQGVAQLNLFDDNA 365 S NLF Sbjct: 364 HSDNEIPFNLFTYEK 378 >UniRef50_Q03R40 Nucleotidyltransferase/DNA polymerase for DNA repair n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R40_LACBA Length = 371 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 72/371 (19%), Positives = 143/371 (38%), Gaps = 21/371 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYAS E P P+++ + G V N A+ LGV Sbjct: 11 IIHVDMDAFYASIEERDHPAFKQHPLIIAQDPRKTGGRGVVATANYAARQLGVHSAMNAN 70 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRD 115 + L + + N+ LY +S+++ E + ++E + DEA+ D+T ++ Sbjct: 71 EALKLAPQA--IFQPPNFPLYRQISDQIHEIFHEYTDKIEPVAFDEAYLDVTENKHHLHS 128 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 EI+ + ++THLT GI+ +K LAK A+ K V + E Sbjct: 129 AVQVAHEIQVEIFEKTHLTCSTGISYSKFLAKEASDFRKPVG------VSVILPEDAHDF 182 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + ALP++ G+G++ K+ +G + + V L E Sbjct: 183 LMALPIERFRGVGKKTVPKMHELGNSYLEPTCIIGQSWPSFMSLVNLAMFCISGSEELTS 242 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + ++ I R++G +T + + A A ++ + ++ + + ++TS Sbjct: 243 GRLPYQRERKSIGKERTYGPPLTTLGEVENQLQRLAEMVAATVQEKQRHGKTLVLKLRTS 302 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ-- 353 F Y + D++ + A ++ + + G+ + +Q Sbjct: 303 AFKTLTKRYT---QADFIA--NDAQTYYDLALDLYQSVAGENEQVRLLGITITGLAAQTF 357 Query: 354 GVAQLNLFDDN 364 +L LFD + Sbjct: 358 ENVRLPLFDSD 368 >UniRef50_A4RZX2 Predicted protein (Fragment) n=2 Tax=Ostreococcus RepID=A4RZX2_OSTLU Length = 427 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 78/352 (22%), Positives = 138/352 (39%), Gaps = 22/352 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + + D++ FYA+CE ++ P L PV V + + N A+ GV+ P F K L Sbjct: 88 WLVVDMDGFYAACEELYDPALKSVPVGVAAGPSSVLTTANYVARKYGVRAAMPGFIAKKL 147 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 +V +++ Y SN + +P S+DEA+ ++T D + Sbjct: 148 CP--DLVFVKPDFKKYVKASNESRGVFAQYNPDYIAGSLDEAYIEVTEYCEKHDTTMEAI 205 Query: 120 GREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EIR+ V + T LT VG ++ LAK+ + K + G + + K + Sbjct: 206 AEEIRSKVKEATGGLTCSVGGGCSRRLAKVCSDFNKPNGQYILG----TTRDDILKFLRD 261 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV ++GIG+ + + L+ IKT DL + + + G Sbjct: 262 LPVRKMYGIGKTLERILNEFDIKTCGDLLAKRATMLALFTPKAFDFLLGIALGIGTECHP 321 Query: 239 EFAPT----KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 P ++ + S +F + D + + A A + + + R ++ +K Sbjct: 322 RETPEGSGGRKGVSKSETF-KATADKAYLDAKMTELATEVALECQRLNLKGRMVAVKLKR 380 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG--HRYQKAG 344 S F + L PT D + I+N+A R + G + G Sbjct: 381 STFDV------IQRQTTLAGPTNDVKTIVNSALRLMRNENSIGANMTLRLVG 426 >UniRef50_D1BPP8 UMUC domain protein DNA-repair protein n=3 Tax=Veillonella RepID=D1BPP8_VEIPT Length = 427 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 81/422 (19%), Positives = 140/422 (33%), Gaps = 25/422 (5%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++ D+ FYAS E D + P+VV + G +A + K LGVK F Sbjct: 9 LYMCIDLKCFYASVECADLGLDPFTTPLVVADGSRGKGAITLAISPALKKLGVKNRSRLF 68 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR 114 + + + + + Y +S + TL + V +YSIDE F D+T Sbjct: 69 Q---IPPHIEYLTVKPHMKRYMQVSAEIYGTLLKYVAPEDVHVYSIDEYFIDITPYLPLY 125 Query: 115 D--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + + VL T + VGI LAK+A K G L + Sbjct: 126 KKTPRQLAQMLLDAVLVATKIYATVGIGTNLFLAKIALDILAKHASDFIGY--LDESLFK 183 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 + P+ D+W IG+ I+ +L G + + + K F + E + G Sbjct: 184 ETIWYHQPLTDIWQIGKGIANRLHKYGAYDLHGITMIPEAKLYKEFGINAELIIDHAWGR 243 Query: 233 PCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 + + P K I S+ Y + +L I Sbjct: 244 EPCTIADIHAYRPIKHSISHSQILLRN-YTYEEACVPMREMVESLVLELLQIKGVTNHIY 302 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 I + E S KL T + + A + + ++ GV D Sbjct: 303 VHIGYAN----EMMRSTGGSKKLKQYTDSLQTLTTAVIKLYEQHCHKNELIRRIGVSFED 358 Query: 350 FFSQGVAQL--NLFD--DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 ++ +LF+ Q+ M ++ + G+ ++ A ++ R Sbjct: 359 LVNRSAIPQEEDLFNILATDTEEKERQVQEAMLSIKEQFGKNSILRASSLQEEGTMRFRN 418 Query: 406 ML 407 L Sbjct: 419 TL 420 >UniRef50_C8WYD4 DNA-directed DNA polymerase n=4 Tax=Alicyclobacillus acidocaldarius RepID=C8WYD4_ALIAD Length = 418 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 87/423 (20%), Positives = 161/423 (38%), Gaps = 31/423 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGK----------PVVVLSN---NDGCVIARNAEAKAL 47 ++ L D+ +FYASCE R + + P+VV + G ++A AK Sbjct: 5 IYGLVDMQSFYASCEVASREEYAARRKEFDDSTDPPLVVSGDPARRSGIILAATPTAKRY 64 Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 GV+ + L+ R ++ + Y +S R+ +++ P E +S+DE F Sbjct: 65 GVENAMRLGEALRLYPR--LIVVRPHMAFYLHVSVRIQMLMQQCFPFQEQFSVDEGFIAF 122 Query: 108 TGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL 166 N D R ++A + + + +G+A K LAK+AN AA ++T G + Sbjct: 123 PYPSNLFPDPIAAARNLQARIWDQFRIRARIGLAPNKWLAKMANKAA----KKTPGGIVW 178 Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 E ++ LPV+++WG+ RR +T+ D+A + ++ F V E Sbjct: 179 WREEDIPSVLHPLPVEEMWGLKRRAEVLRRKFKCETIGDVARLPVGVLKAEFGVWGEVIH 238 Query: 227 RELRGEPCLQLEE--FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 R G + + + + + + I +LR HQ Sbjct: 239 RWANGIDVSDINPDSYHAPHKGFSHRTTLPRDFYERSEIAVVILELLDEVCHRLRQAHQA 298 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 R + + G + L T D ++ LD W G + Sbjct: 299 GRRVGLGLTY-----EGLTGGFYRARTLPRATNDPAELYPVLLALLDEHWD-GSGVRAVS 352 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 V + + QL+LF++ P +L +D + A+ G ++ A + +R Sbjct: 353 VAVDMLQFRETLQLSLFENV---PARTRLYETVDEIRARFGETSIMRAVSLTRAGQLRER 409 Query: 405 AML 407 ++ Sbjct: 410 SLR 412 >UniRef50_UPI0000D862D7 hypothetical protein CIMG_01093 n=1 Tax=Coccidioides immitis RS RepID=UPI0000D862D7 Length = 1021 Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats. Identities = 62/352 (17%), Positives = 121/352 (34%), Gaps = 39/352 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+L KPV + + + N A+A G++ G Sbjct: 350 ILHVDFDSFFAAVSIRKNPELADKPVAIAHGTGAGSEIASCNYPARAFGIQNGMWMQGAL 409 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-------- 111 + + ++ Y D S + + ++ V+ SIDEA D+T + Sbjct: 410 QMCP--DLKVLPYDFAAYEDASRKFYEAILDIDGIVQSVSIDEALVDITKLCLEAGGSEG 467 Query: 112 ----------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + + +R +V Q+T V VGI AKLA AK + Sbjct: 468 KGISEGSIWKEQAKADEIAQTLRDSVKQKTGCDVSVGIGGNILQAKLALRKAKPAGQFQL 527 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 E + + L V + G+ + KL+ +G+K V D+ + + + Sbjct: 528 ------KPEVVLEFIGELTVQQLPGVAYSLGAKLEELGVKFVKDIRELSRERLTSNLGPK 581 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG + + AP ++ + ++G R + + + S +L Sbjct: 582 TGAKLWDYARGIDNADVGDVAP-RKSVSAEINWGIRFVTQAQVEEFVQSLCDELHRRLME 640 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDII 323 + ++ I + + SV L T S ++ Sbjct: 641 NGVKGKQLTMRIMRRALDAPLGPPKHLGHGKCDMFNKSVLLGVATNSSEVLV 692 >UniRef50_C3AWZ9 DNA-damage repair protein n=3 Tax=Bacillus cereus group RepID=C3AWZ9_BACMY Length = 396 Score = 310 bits (795), Expect = 6e-83, Method: Composition-based stats. Identities = 85/394 (21%), Positives = 157/394 (39%), Gaps = 18/394 (4%) Query: 22 LWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYAD 79 L K VV N V+A E K LG+ ++ ++ ++ + + Sbjct: 7 LKVKLAVVGDVNRKGSIVLACTPELKKLGISTATRLYEIPK---DPNIIIVNATMGRFVE 63 Query: 80 MSNRVMSTLEELS--PRVEIYSIDEAFCDL--TGVRNCRDLTDFGREIRATVLQRTHLTV 135 +SN++ + + ++SIDE F D+ T RD I+ + T +T Sbjct: 64 ISNQITEIYTKYVALEDLHVFSIDECFLDMEQTAHLFGRDPIVIAERIQKEIYDTTGITA 123 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +GI L+K+A K R +V + + +KL + P+ DV GIG L Sbjct: 124 SIGIGPNLFLSKVALDVESKHSRSR--IVLWTYEDVPKKLWNIKPLKDVCGIGSATQDAL 181 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL-EEFAPTKQEIICSRSF 253 MG+ ++ D+A+T + K F V E R G ++ ++ P I + Sbjct: 182 HGMGLFSLQDVANTPKERLIKRFGKVKGEELHRFSFGIDESRIANKYIPKSTSITKGQIL 241 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 E ++ I +LRS + CR + I S + ++ L Sbjct: 242 LEDCYSLNKLKLLILEQIEETCFRLRSMDKCCRTVELAIGYSKYIGGG----FKRAITLD 297 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 PT + D+ A+ + L + +GH ++ + L + Q++LF+D + + +L Sbjct: 298 QPTCLTEDVYEASLQLLRR-FHSGHPVRQIHITLKNLTRDDAIQMSLFEDTSRKDTQRKL 356 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 MD++ + G+ ++ IQ Q +R Sbjct: 357 AKTMDSIRNRYGKNSIMRGISYIQGATQRERNNK 390 >UniRef50_UPI0001B7B957 DinB1 protein n=3 Tax=Euteleostomi RepID=UPI0001B7B957 Length = 793 Score = 310 bits (795), Expect = 7e-83, Method: Composition-based stats. Identities = 72/381 (18%), Positives = 127/381 (33%), Gaps = 45/381 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P+L KP+ V S + N A+ GV+ P F K L Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKEKPIAVGSM--SMLATSNYHARRFGVRAAMPGFIAKRL 159 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + ++ N++ Y +S V L E P S+DEA+ ++T ++ ++ + Sbjct: 160 CPQ--LIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNIT--QHLQERQGWPE 215 Query: 122 EIRATVLQRTHLTVGVG----------------------IAQTKTLAKLANHAAKKWQRQ 159 + + + +G IA LAK+ + K + Sbjct: 216 D-KRRYFIKMGNCRKIGILTLAMTTGNFHLLRLAQPQGCIAPNTMLAKVCSDKNKPNGQY 274 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 + + + LP+ V GIG+ K L A+GI T +L Sbjct: 275 Q----IVPSRSAVMDFIKDLPIRKVSGIGKVTEKMLLALGIVTCTELYQQRALLSLLFSE 330 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 + G L ++ + R+F E I A L+ Sbjct: 331 SSWHYFLHVALGLGSTDL-ARDGERKSMSVERTFSE-INKTEEQYSLCQELCTELAHDLQ 388 Query: 280 SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW----Q 335 E R ++ +K F + + + + + + DI A L Sbjct: 389 KEGLKGRTVTIKLKNVDFEVK------TRASTVPSAISTAEDIFAVAKELLRTEVTAGSP 442 Query: 336 AGHRYQKAGVMLGDFFSQGVA 356 R + GV + F + Sbjct: 443 QPLRLRLMGVRMSTFSNDDDR 463 >UniRef50_C7N9E0 DNA-directed DNA polymerase n=5 Tax=Fusobacteriaceae RepID=C7N9E0_LEPBD Length = 363 Score = 310 bits (795), Expect = 7e-83, Method: Composition-based stats. Identities = 73/374 (19%), Positives = 148/374 (39%), Gaps = 30/374 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++AF+A+ E +L GKP+ + G V + EA+ G+K P + K Sbjct: 6 IYLHYDMDAFFAAIEQRDNKELRGKPIAIGH---GVVTTASYEARKFGIKSAMPTVQAKR 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD----- 115 L ++ S ++Y + R+ ++ + + E S+DE + D+T ++ Sbjct: 63 LCPS--LIVVSLRKDIYFEEGRRIQGLIKNILKKCEFTSVDEGYIDITEFIQNKNIKLDK 120 Query: 116 ------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + F ++ + + + LT VGI +K AK+A+ K G N Sbjct: 121 RDEILKIERFIKKFKQYIYDNSKLTCSVGIGFSKISAKIASDINKPN-----GYFIFKNR 175 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRE 228 E + + + + GIG++ + L TV L + + + + F E Sbjct: 176 EHFLEYIYDKNLAIIPGIGKKTREVLKLFNTTTVFQLYEIEKNELIRRFGMSKGEYLYNT 235 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 +RG ++ +Q +F D + + + + + KL ++++ + + Sbjct: 236 VRGLHFTEINTDR-KRQSYGHEITFNREENDISIIYDELKKQSNKLSRKLIEKNEFAKTV 294 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + I+ S F ++ S L T + I A +L+ ++ + GV L Sbjct: 295 TVKIRYSNF------VTHTRSRTLENATNNENKIYEATLENLN-FFEKKDEIRLIGVQLS 347 Query: 349 DFFSQGVAQLNLFD 362 V QL+ D Sbjct: 348 SILKSNVVQLSFND 361 >UniRef50_D2R017 DNA-directed DNA polymerase n=2 Tax=Planctomycetaceae RepID=D2R017_9PLAN Length = 398 Score = 310 bits (794), Expect = 8e-83, Method: Composition-based stats. Identities = 107/395 (27%), Positives = 165/395 (41%), Gaps = 22/395 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D + FY S E V L KPV VL N CVIA++ E K GVK G+P ++ Sbjct: 2 LIAHLDADCFYVSAERVRDRFLADKPVGVLGNQGACVIAKSYEMKKAGVKTGEPIWEALT 61 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + ++ Y +S ++ + E SP+VE YSIDE F + + F Sbjct: 62 KCPDG--IYVKRDFRWYEVLSRAMLDVVREFSPQVEYYSIDEFFLSV-----DQSPASFA 114 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 E++ +L R + V +G+A+T+TLAKL + AK + + L E + +L+++ P Sbjct: 115 HELQQAILDRVGVPVTIGVARTRTLAKLVSDLAKPFGA-----LALIGREAEEQLLASRP 169 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 DV GI R + KL + GI T LDLA D +R V ER ELRGE C+ ++ Sbjct: 170 ASDVTGIAERSAAKLRSFGIVTCLDLARADPTQVRSVLTVTGERLCYELRGEKCVPIQSK 229 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P + + S G +D R E L S ++ + + Sbjct: 230 RPLHKIVSRGGSIGAPSSDPAIQWAWCVRNLERLIEALESYGLCAGKLAFAV---DYKHG 286 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 ++ L PT ++ AA + G + + G QL L Sbjct: 287 PTCAADTR---LTFPTTRFDMLVEAARHLWKQVQMQGLLLYRMHYFASELQYPGPRQLGL 343 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 F+ L + +N++ GR L A Sbjct: 344 FEPTIRDG----LHALKSEINSRHGRFALRSAATL 374 >UniRef50_A9A3A9 DNA polymerase IV n=6 Tax=Thaumarchaeota RepID=DPO4_NITMS Length = 364 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 152/370 (41%), Gaps = 24/370 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D + FYA CE + P+L KPV V + G + N A+ G K G P Sbjct: 5 IVFHIDFDYFYAQCEEIRSPELKSKPVCVCVFSDRGGDSGAIATANYTARKYGAKSGIPI 64 Query: 56 FKQKD-LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-- 112 K L R V +++ Y++MS + M +EE S E DEA+ D+T Sbjct: 65 VFAKKRLEERKDAVFLPVDFDYYSEMSEKAMKIMEEFSDVFEYVGRDEAYLDVTKRTEGD 124 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + ++I+ ++ ++T L+ +GI+ K ++K+A+ K + + + E+ Sbjct: 125 FHKASHLAQQIKNSIREKTKLSCSIGISPNKLISKIASDFQKPDG------LTIVSPEKV 178 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRG 231 + +L + D+ GIG++ ++ M ++T+ D+ D+ + K F +RG Sbjct: 179 EGFLESLKIRDIPGIGKKTEQRFTEMNLETIGDVKRLDVFTLNKEFGRKSGTYIYNAVRG 238 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 ++E P+ Q + + DY + + E ++ ++Q + + Sbjct: 239 IDDELVKEREPSIQ-HGKIVTLKKDSKDYEFLLENTLELCKEVHEIIQKKNQMFKSVGIS 297 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA-IWQAGHRYQKAGVMLGDF 350 S + + S L PT ++ + L + ++ GV + + Sbjct: 298 FVQSDLSNK------TKSKMLRNPTMSLEELEKTVEQLLREALENQTATIRRLGVKVSEL 351 Query: 351 FSQGVAQLNL 360 S+ Q ++ Sbjct: 352 -SESQGQRDI 360 >UniRef50_C4XEA8 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEA8_MYCFE Length = 416 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 86/412 (20%), Positives = 170/412 (41%), Gaps = 25/412 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D ++++ S P+L GK V + V + + E K G K+G P K + Sbjct: 7 IFHMDFDSYFVSAHRSINPELKGKSVAIGRRLKRSIVSSISYELKRKGAKVGWPKNKILE 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMS-TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 + V N++LY +SN++ E+ + +E++SIDE + D+T + RD D Sbjct: 67 IDP--LTVFIEPNFDLYLSLSNKIFEFISEKYTKNIEVFSIDECWLDVTDIIKNRDPKDL 124 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + I++ +L + +GI+ K LAKL+ + K + + E K + L Sbjct: 125 AKSIQSDILNTFDIPATIGISYNKFLAKLSTNLGKPFGILE------TKEEDIEKRIWPL 178 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR--FIRKHFNVVLERTVRELRGEPCLQL 237 P+ + +GIG +++L M I T+ LA + I+K F V + + E +G QL Sbjct: 179 PIIEFFGIGAPTAERLIRMHIDTIGKLAKCNWENFKIQKIFGVKTKGIILEAQGNGNDQL 238 Query: 238 EEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + I +F I D + + S + +++ ++ + IS I+ Sbjct: 239 NYEHNDLKNIGNELTFLTYDIDDRKEILLILRSLCVKVSKRAKNRNTLPEVISCSIR--- 295 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QG 354 + +S + + D I A++ + +W + GV L + Sbjct: 296 ---DTNKTWHSKQKTMSVVSNDEDIIFKEASKLFEILWNE-EPIRGIGVRLHKLVNEFDY 351 Query: 355 VAQLNLFDDNAPRPGSE-QLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 QL++F ++ +++ +N + L A + ++ + K+ Sbjct: 352 GKQLSIFTTPEDESSQTIKIKNIINDVNYQLRDKKLKLASEYSKE--KKKQN 401 >UniRef50_C1XR91 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Bacteria RepID=C1XR91_9DEIN Length = 396 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 97/400 (24%), Positives = 155/400 (38%), Gaps = 30/400 (7%) Query: 7 VNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 +NA++AS E RP+L GKPV V+ C IA + EAK GVK G + L Sbjct: 1 MNAYFASVEQQMRPELRGKPVGVVPVMAESTCCIAVSYEAKRYGVKTGTRVADARLLCPH 60 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDFGREI 123 + + +LY + ++ ++ + P + SIDE C L GV + Sbjct: 61 --IAIVEARPQLYIQVHREILKAIDTVLPIQAVLSIDEVVCKLIGVERKPHQAIRLAEAV 118 Query: 124 RATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 + + + L VG+ K LAK+A+ K + L + + + L + Sbjct: 119 KQAIKTQVGPYLRCSVGLGPNKLLAKVASDMKKPDG------LTLLEPQTLPQALFGLRL 172 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV--LERTVRELRGEPCLQLEE 239 D GIG R+ + + GI TV +L + + + R LRGE L E Sbjct: 173 CDFPGIGPRMEARFHSFGITTVEELYQLSPHQLSRIWGSSQIGTSWWRRLRGED---LPE 229 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I SR + + + + +AA +LR E+ + I F+ Sbjct: 230 APTRRHSISHSRVLPPQERNDERAKAVLMRLVYKAAARLRHENYWTGSIRVFVAY----- 284 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 +L + QD+ +I A R G K GV+LG+ Sbjct: 285 -LGRPLWHEECRLPSC-QDTLTLIRATDRLW-KHKPLGTPL-KVGVILGNLEPDPSISWP 340 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 LF + +L +D N K G +LYFAG + + Sbjct: 341 LFSE---DQKLIRLSQAIDQANRKFGAYSLYFAGMDMGKP 377 >UniRef50_O94623 DNA repair protein rev1 n=1 Tax=Schizosaccharomyces pombe RepID=REV1_SCHPO Length = 935 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 75/368 (20%), Positives = 130/368 (35%), Gaps = 23/368 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D + F+AS T F +L KPV V + + + N EA+ G+K G K+L Sbjct: 280 LHVDFDCFFASVSTRFSHELRLKPVAVAHGIKNSEIASCNYEARKFGIKNGMYVGTAKNL 339 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTL-EELSPRVEIYSIDEAFCDLTGV-RNCRDLTDF 119 + ++ Y +S + L L +++ SIDEA D+T + +D + Sbjct: 340 CPS--LRVVDYDFGAYESVSREFYTILVNTLHDYIKVISIDEALLDITSSVSSFQDCFEI 397 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IR+ V ++T+ V VGI LA+LA AK + + E ++S L Sbjct: 398 AESIRSQVREKTNCEVSVGIGPNVLLARLALRKAKPHNVYSLSI------ENVFDVLSPL 451 Query: 180 PVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 V D+ G+G ++KL + G++T+ L + +++ F V RG + Sbjct: 452 SVQDLPGVGSSQAQKLFNLYGVRTIGQLQRIEKFNLQETFGVNYGLHLYNISRGID-TDI 510 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI-KTSP 296 ++ I ++G R + ++ I I K + Sbjct: 511 INNETPRRSISVDVNWGVRFVFQEDGIDFLKRLLHELLSRMGKCQVLLHQIQLRILKRAD 570 Query: 297 FALNEPYY--------GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 A P + S + T I T I + G+ Sbjct: 571 GAPFSPPKYLGAGEVTSFTKSSTFTSATNSFDLIWKKVTSMYKTINVDPGDVRGIGLQAL 630 Query: 349 DFFSQGVA 356 Sbjct: 631 KIIKDNSK 638 >UniRef50_B5BUV5 DNA polymerase kappa n=2 Tax=Agaricales RepID=B5BUV5_COPCI Length = 707 Score = 308 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 75/346 (21%), Positives = 138/346 (39%), Gaps = 29/346 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E + P L GKP V G + + EA+ GV+ G F K L Sbjct: 106 IVHVDMDAFYANVEILRDPSLKGKPFAVG---RGVMSTASYEARKYGVRSGMAGFIGKKL 162 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DF 119 + ++ ++++LY+ S ++MS P + +DEA+ ++T T + Sbjct: 163 CPQ--LIFVPAHFDLYSKTSAQIMSIFRRYDPTMCPAGVDEAYLNVTAYCKQHGKTVDEV 220 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 E+R V T LTV GIA K LAK+ + K + + + M +L Sbjct: 221 VSEMRKAVFDETQLTVSAGIAPNKMLAKICSDKNKPNGQFKLEF----EPDSIKAFMHSL 276 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTD--IRFIRKHFNVVLERTVRELRGEPCLQL 237 + V G+GR + LD++GI+T D+ I + K F L+ +R G + Sbjct: 277 SIRKVPGVGRVNERLLDSIGIRTCGDIYQQRGVIALMDKRFG--LDFLLRVYLGIASNHV 334 Query: 238 EEF-APTKQEIICSRSFGERITDYPSMRQAICSYAAR-------AAEKLRSEHQYCRFIS 289 ++ I R+F +++ ++ + A+ E ++ E + ++ Sbjct: 335 APHAREERKSIGAERTFSTLDSNHADPKKGSVAIVAKLEEVAEELVEDMKREGWVGKTVT 394 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 K + S + ++ N L + + Sbjct: 395 LKYKLDTYQTFTRAKQFSKWITTKE------ELFNTGKELLLSRFP 434 >UniRef50_Q4P422 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P422_USTMA Length = 682 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 77/381 (20%), Positives = 144/381 (37%), Gaps = 30/381 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKA-LGVKMGDPWFKQKD 60 D++ FYA+ E P L GK V S G ++ + EA+ GV+ G F K Sbjct: 148 ILHTDIDMFYAAVELARDPSLKGKCFGVGS---GVLVTASYEARRGYGVRSGMAVFVAKA 204 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV--RNCRDLTD 118 L ++ ++ + Y S +VM+ E+ + S+DEA+ D+T +N + Sbjct: 205 LCPH--LIVVKNDMQSYVQASQKVMAIFEQYDENLAKASLDEAYLDITEYVEQNASSIDQ 262 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +++R V T LTV VGIA LAK+++ K + + + M Sbjct: 263 VVQQLRNQVRSHTQLTVSVGIAPNTMLAKISSDRNKPDGQFRIQ----PDRKVIVDFMRN 318 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP + GIGR + L+++G+ T ++ D + + E ++ G +E Sbjct: 319 LPCRKIPGIGRVNERILESLGVTTCGEIWDKRVELWLSFDGKI-EWLIKAHLGIGNTVVE 377 Query: 239 E-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F +D ++ + A R + L + I+ K F Sbjct: 378 PSKREERKSVGREHTFS-PTSDTKALLDLLKESAQRVEQDLARLDFKAKTITLVAKRDNF 436 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSL-DAIWQAG-HRYQKAGVMLGDFFSQGV 355 S + + ++ + + L I + G + GV + Sbjct: 437 Q------RFSRARTSTRLVHRAEELYDITSSLLMQEIEREGAISLRLIGVRVTQLV---- 486 Query: 356 AQLNLFDDNAPRPGSEQLMTV 376 +L A +L+ Sbjct: 487 ---DLRGAAAGEERLRKLLQA 504 >UniRef50_UPI0000F2F527 DNA-directed DNA polymerase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=UPI0000F2F527 Length = 375 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 122/375 (32%), Positives = 192/375 (51%), Gaps = 4/375 (1%) Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLT 108 MG+P F+ DL R V+ SSNY +Y +MS R L E EIYS+DEAF +LT Sbjct: 1 MGEPLFQILDLVMRNDVIVLSSNYIIYGEMSRRFHKILAEYVSPENHEIYSVDEAFLELT 60 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 R +L ++I+ +L+ L V VGI ++KT AK+ N+ AK + G Sbjct: 61 SYRGIYNLNQCAQDIKEKLLKLLSLPVCVGIGRSKTEAKIMNYIAKTYPHLNGICNVFDL 120 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 E + + V +VWG+G + KKL M I TV DL I+ F+VVL+RTV E Sbjct: 121 AEVKDSIFRNTDVGEVWGVGSQQKKKLRLMNINTVYDLMTASPSHIQSVFSVVLKRTVLE 180 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 L G C+ +E PTK++I+ SR+FG+RITD +++A+ A + R+E I Sbjct: 181 LNGISCIDIEHTPPTKKQIVSSRTFGQRITDIHDLKEAVIKRTQEAFTRARNEQVLVGCI 240 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 F ++PF +P+Y S PT D R ++ ATR +D ++++G ++KAGV+L Sbjct: 241 IVFAYSNPFDKTKPFYKKEQSSSFAVPTDDLRLLVQTATRLMDQVYKSGIEFKKAGVILT 300 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ-WQMKRAML 407 + +L D+ +EQLM ++ + G+ + F G + + W + Sbjct: 301 CLEPKHTYTYDLLTDHQDLEKTEQLMKAIEEVQQIFGKNKIGFGGSMFKNRIWNLTANYQ 360 Query: 408 SPRYTTRSSDLLRVK 422 + Y ++++K Sbjct: 361 TRNYF-SFDGMIKIK 374 >UniRef50_B7P2Q3 DNA polymerase IV / kappa, putative n=1 Tax=Ixodes scapularis RepID=B7P2Q3_IXOSC Length = 487 Score = 307 bits (788), Expect = 5e-82, Method: Composition-based stats. Identities = 84/371 (22%), Positives = 141/371 (38%), Gaps = 29/371 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++A++A+ E P L KP+ + N EA+ GV+ P F K Sbjct: 87 IVVHVDMDAYFAAVEMRDDPSLKDKPMAQAPFS-FLASTSNYEARKFGVRAAMPGFIGKK 145 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLTD 118 L ++ N+ Y+ +S V + +DEA+ D+T N D D Sbjct: 146 LCPS--LLIVRPNFNKYSSVSAEVRKVMARYDEDFMPVGLDEAYLDITDHVNATDADPED 203 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 RE+R + + T LT IA LAK+ + K + +++ R+ + + Sbjct: 204 IVREMRKKIFEATQLTAR--IAPNMFLAKVCSDIRKPNNQFR----LPNDINAVREFVRS 257 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV-RELRGEPCLQL 237 LP+ V GIG + L A+G +T DL I F + R R G C ++ Sbjct: 258 LPIRKVPGIGAVQEQLLRALGAQTCHDLW-VKRAAIGHLFGMTSARFYLRAALGLGCTEV 316 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + + +F E ++ ++ + E++ + R ++ IKT F Sbjct: 317 KCDSAC-KSKSVEETFSE-LSSPEALVSKCEELCEQLCEQVEDDGITGRVVTLKIKTVAF 374 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR-----YQKAGVMLGDF-- 350 + + SV L + T I AA R L A + GV L Sbjct: 375 DVM------TRSVTLDSATNRIEPIKKAALRLLRQEIAAAKPDCPLRLRLMGVRLSGLND 428 Query: 351 -FSQGVAQLNL 360 S +Q L Sbjct: 429 GASSSASQPTL 439 >UniRef50_A4S3F0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S3F0_OSTLU Length = 618 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 76/385 (19%), Positives = 133/385 (34%), Gaps = 35/385 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWG-KPVVVL----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++ F+AS RP+L P+ V ++ G V + N A+A GVK G Sbjct: 59 IFHVDMDCFFASVAMRARPELSTETPLAVSWGTSASKRGEVSSANYAARAFGVKAGMWLD 118 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEI-YSIDEAFCDLTGVRNCRD 115 + L +V ++ Y ++ V L E S + S DEAF D+T D Sbjct: 119 EALRLCPE--LVLAPYDFAEYEKVALEVYEILFEASRGECVGISCDEAFIDVTSRCESED 176 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 +IR V +T +GI LA+LA AK + +R+ Sbjct: 177 AVAVAEQIRRDVYAKTKCACSIGIGSNMLLARLATRRAKPDGAFR------VEPKDEREF 230 Query: 176 MSALPVDDVWGIGRRISKKLDAM-GIK---TVLDLADTDIRFIRKHFNV-VLERTVRELR 230 ++ + D+ G GR +KL I+ T L + ++ E+ + R Sbjct: 231 IAKTRLADLPGFGRHAGEKLQKSTKIRVTDTCETLLKVPVATLKSALGAQKTEKLLEAAR 290 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G P ++ I S+G R + A +++ R ++ Sbjct: 291 GIDKTPW-CVRPQRKSIGAQMSWGVRCASNEVAMDYVKQLVREVAYRMQRLKIRGRALNL 349 Query: 291 FIKTS--------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 + + + + + + + + D+ II+ A L + + Sbjct: 350 KLWRAIPDVNTMRDYQGHGACDVLTRTKAMRELSNDTELIISEALTILRELNVEATSIRG 409 Query: 343 AGVMLGDF-------FSQGVAQLNL 360 GV + S G Q L Sbjct: 410 LGVSITKLEHGAETATSPGAKQPTL 434 >UniRef50_Q8REB0 DNA polymerase IV n=8 Tax=Fusobacterium RepID=DPO4_FUSNN Length = 350 Score = 306 bits (786), Expect = 7e-82, Method: Composition-based stats. Identities = 74/361 (20%), Positives = 142/361 (39%), Gaps = 19/361 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFYAS E P L KP+VV N V + EA+ + K Sbjct: 4 IIMHYDMDAFYASIEINRNPKLKNKPLVVGEN---IVTTASYEARKYDIHSAMKVSDAKL 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + ++ + Y +SN + + + +++ +VE + DE + DLT V + F Sbjct: 61 LCPK--LIVLPVDKTEYIRISNEIHNLILKITNKVEFVATDEGYIDLTDVIKPENKKAFV 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + + + T+LT VGI K AK+A+ K + + K +S Sbjct: 119 IKFKQRIKELTNLTCSVGIGFNKLSAKIASDINKPFGFFIFENEE-----EFIKHISDKK 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEE 239 + + G+G++ + L I V D+ + ++ K + E +RG ++E Sbjct: 174 IKIIPGVGKKFFEILKNDKIFYVKDIFKYPLDYLVKKYGKSRGENLYCSVRGIDFDEVEY 233 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 I +F + + + + S E+L + + + I+ ++ + F Sbjct: 234 QREIY-SIGNEETFLIPLQNNSEIIREFNSLFEYTFERLLKNNVFTQSITIKMRYTSFK- 291 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S KL T+ + N +++ + + GV GD + QL Sbjct: 292 -----TYTKSKKLKFSTRSKDFLYNEMFELINSFEKED-EVRLLGVYFGDIKKSNLVQLA 345 Query: 360 L 360 L Sbjct: 346 L 346 >UniRef50_A8PXZ2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PXZ2_MALGO Length = 525 Score = 305 bits (783), Expect = 2e-81, Method: Composition-based stats. Identities = 73/358 (20%), Positives = 129/358 (36%), Gaps = 25/358 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 CD++ FYA+ E RP+L G V G ++ + EA+ GV+ F + + Sbjct: 42 ILHCDMDMFYAAVELQRRPELAGACFAVGH---GVLLTASYEARQFGVRSAMAEFVARAI 98 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD---LTD 118 ++ ++ ++Y S VM+ L + ++ S+DEA+ D+T D Sbjct: 99 CP--NLIVVPAHMDVYKRSSEAVMAVLAKYDAQLYQRSLDEAYLDITSYCAEHGHAHPRD 156 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++RA VL T LTV VGIA + LAK+A+ K + M Sbjct: 157 VAAQLRADVLAATGLTVSVGIAPNRLLAKIASDRCKPNGLW----YVAPTRQDALAFMHD 212 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L V V GIG+ + + L AM I T DL + I + + + G + Sbjct: 213 LSVRKVPGIGQVMERMLQAMSIHTCHDLWERRIELSLCIDSYRM--LLASALGIGDAHVT 270 Query: 239 -EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F +D + + + + L + R +S K F Sbjct: 271 LPARTARRSVGRELTFA-PTSDPTHLHAKLRATCEQLERDLATLEYRGRTVSLVGKHDTF 329 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFS 352 + + D+ L+ + + GV + Sbjct: 330 E------RFTRARACPQGVSSFDDLYGVVHALLEQERASFPVPLCLRLIGVRVSSLID 381 >UniRef50_Q4S0P1 Chromosome 2 SCAF14781, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4S0P1_TETNG Length = 1313 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 128/335 (38%), Gaps = 22/335 (6%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + + + EA+ GV+ G + K K L + ++E Y +++ + TL + +E Sbjct: 627 IASCSYEARQAGVRNGMFFGKAKQLCPS--LQAVPYDFEAYKEVALTMYDTLAGYTHDIE 684 Query: 97 IYSIDEAFCDLTGVRN--CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DE D + + C + + + IRA + ++T VG+ LA+LA AK Sbjct: 685 ALSCDELLMDTSALLAELCVNPEELAKAIRADIKEKTGCCASVGMGSNILLARLATRKAK 744 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + E + LPV + G+G +S+KL AMG+++ DL + + Sbjct: 745 PDGQYFL------RSEDVDDFIRDLPVTSLPGVGPVMSRKLAAMGVRSCGDLQQVSMSQL 798 Query: 215 RKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 +K F + R RG + + ++ + ++ R T + + + Sbjct: 799 QKKFGPRTGQTLFRFSRGLDDRPVR-YEKERKSVSADMNYNIRFTTVDEAECFLTNLSME 857 Query: 274 AAEKLRSEHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 ++L+ R ++ + + + + + +V L T D R I Sbjct: 858 VQKRLQEAGLRGRRVTLKVMVRKVGAPQEPAKYGGHGICDNLARTVMLAASTDDGRLIAA 917 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 A + A+ + G+ + Q + Sbjct: 918 AVIKLFHAMKLQVQDLRGVGIQVQ-LLDGNAHQAS 951 >UniRef50_A3GH67 DNA repair protein n=2 Tax=Pichia stipitis RepID=A3GH67_PICST Length = 1118 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 71/410 (17%), Positives = 128/410 (31%), Gaps = 49/410 (11%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + RP+L P+ V V + N A+ GVK G + Sbjct: 406 VIFHVDFDCFFATASCLNRPELDINKDPIAVTHGGKSSDVASCNYVARNFGVKNGMWVSQ 465 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCRD 115 K L ++ +Y+ Y S+ + + SIDE D + + Sbjct: 466 AKKLCP--NLIMLDYDYKRYESYSSEFYNYFLSYDIFDSIFPVSIDEVLIDASSHFAQNE 523 Query: 116 ------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + IR + + T +V VG+++ LAKLA AK + Sbjct: 524 ENLVDMVNALSTRIRDDIFKFTKCSVSVGVSRNVMLAKLALRKAKPNGQFFLY------- 576 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKL-------DAMGIKTVLDLADTDIRFIRKHFN-VV 221 E + + ++ V + GIGR I ++L M I + DL + Sbjct: 577 EGVDEFLDSISVKSLPGIGRSIQERLADVLNQPKTMDIY-IRDLKAFSKTKLISILGDKT 635 Query: 222 LERTVRELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + RG L E ++ + +FG R + + A Sbjct: 636 GVKLYEYARGIDDTSLVIDTSNPEALLGRKSVSVDVNFGIRFDTVSELDDFLIRIAKELY 695 Query: 276 EKLRSEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 +L S ++ + + + + S L PT D I + Sbjct: 696 SRLISLGVCGSNLTLKLAKRAPGAAVNPAKYLGMGYCDFVNKSSHLGVPTNDWGIIGSEL 755 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFS----QGVAQLNL-FDDNAPRPGSE 371 + + + L + Q+ L F +E Sbjct: 756 KALYRMVNVPVKELRGISISLTKLRDVENLKSSKQMKLPFKKTKELVRTE 805 >UniRef50_B1AJ79 DNA polymerase IV n=15 Tax=Ureaplasma RepID=DPO4_UREP2 Length = 360 Score = 303 bits (778), Expect = 5e-81, Method: Composition-based stats. Identities = 78/369 (21%), Positives = 156/369 (42%), Gaps = 23/369 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AFYA+ + P+ P+ V S + G + + N A++ GVK P F Sbjct: 8 IIMHLDIDAFYATVSELLHPEYKNFPIAVGSLNSRTGIISSPNYLARSYGVKAAMPIFLA 67 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DL 116 K+L ++ S + +Y S + + + ++EI SIDE F D T + ++ Sbjct: 68 KELCP--NLIILPSEHNIYQSYSKHFFQIINKYTNKIEITSIDECFIDATDLVKKYHNNI 125 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +I+ + + +L++ +GI+ KT+AK+A K + + + + L+ Sbjct: 126 RLLATKIQKEIKNKLNLSISIGISYNKTIAKMATELNKPSG------ISIIDENKIINLI 179 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDL-ADTDIRFIRKHFNVVLERTVRELRGEPCL 235 L ++ + IG S++L A+ I + +L A + + I + + V +L+G + Sbjct: 180 YELNINKIPYIGEIKSQELYAINIFKIKELIATENKQKISLVLGSIYQNLVNDLKGLSKI 239 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ + + I S++F E + D+ + + +L+ + IS +IK Sbjct: 240 KIIDED-IYKTISHSKTFNEDLNDFYEISNEMNDLILTVTNRLKKCNLMTNNISIYIKYP 298 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F +L T D + I A +++ + G+ L + Sbjct: 299 SFKTKI------KQKQLTYYTDDYQTIFLAIKNLFKIMYKD-ETIRLIGISLNKLVKKEN 351 Query: 356 A--QLNLFD 362 QL LFD Sbjct: 352 VKKQLFLFD 360 >UniRef50_C5MCF2 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MCF2_CANTT Length = 1121 Score = 303 bits (778), Expect = 7e-81, Method: Composition-based stats. Identities = 68/394 (17%), Positives = 130/394 (32%), Gaps = 43/394 (10%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + RPDL P+ V + + N A++ G+K G Sbjct: 398 VIMHIDFDCFFATASCLLRPDLDINKHPIAVTHGGRTSDIASCNYVARSFGLKNGMWLGS 457 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCR- 114 K + ++ +++ Y S+ + L + + SIDE D T N + Sbjct: 458 AKKMCP--NLITLPYDFDSYEKYSSEFYNYLLSSKYFDSIFPVSIDEVLVDATTYCNSQI 515 Query: 115 -----DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + + IR V T +V VG + LAKLA AK + Sbjct: 516 GGIHTVVEELSSRIRQDVFTLTKCSVSVGASTNVLLAKLALRKAKPNGQFQLF------- 568 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT---VLDLADTDIRFIRKHFN-VVLERT 225 + + + + D+ G GR I +KL T + D+ + + + Sbjct: 569 DNVESFLQTISIRDLPGFGRGIMEKLQNHTSATNPEIKDILHLSKAALIESLGEKTGCKL 628 Query: 226 VRELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 RG ++E E ++ + +FG R + + + ++L Sbjct: 629 YEYCRGIDETKIEIDTKNPEAMLGRKSVSVDVNFGIRFDTVEELDDFLVRLSKELYQRLV 688 Query: 280 SEHQYCRFISTFI-KTS--------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 + +S + K + F + S +L PT D I N Sbjct: 689 TLGICGSSLSLRLAKRAAGAPVNPPKFLGMGYCDYVNKSSRLGVPTNDWGIIGNEVKSLY 748 Query: 331 DAIWQAGHRYQKAGVMLGDFFS----QGVAQLNL 360 ++ + + + + Q+ L Sbjct: 749 RSVNIQVSELRGVSITMAKLKDTESVKNSRQMRL 782 >UniRef50_C4Z6F8 DNA polymerase V n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z6F8_EUBE2 Length = 455 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 86/445 (19%), Positives = 160/445 (35%), Gaps = 41/445 (9%) Query: 1 MFALCDVNAFYASCETVFR-PDLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++ D+ +FYAS E V R D +VV + +A K G+ F Sbjct: 4 VYIAIDLKSFYASVECVERESDPLTTNLVVADESRTAKTICLAVTPSLKKYGLSGRSRLF 63 Query: 57 KQKDLFRR--------CGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCD 106 + + + + LY + S+++ S + + +YSIDE F D Sbjct: 64 EVEQKAKEIEKRTGKKLEYIVAVPRMGLYIEYSSKIYSIYLKYFSKDDITVYSIDEVFID 123 Query: 107 LTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR---QTG 161 T + ++ V T +T GIA L K+A K + + Sbjct: 124 ATDYMKLYNMTARQLTAKVIEDVYDTTGITATAGIAPNLYLCKIAMDIVAKHIQADSKGV 183 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT---DIRFIRKHF 218 + +LS + ++ L P+ D W +G IS++L+ GIKT+ D+A D ++ K F Sbjct: 184 RIAELSVNDYRKMLWGHTPLTDFWRVGPGISRQLEKHGIKTMGDIARMSLEDEDWLYKQF 243 Query: 219 NVVLERTVRELRGEPCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 V E + G ++++ P + + E + R + A A Sbjct: 244 GVDAEILIDHAWGYEPCTIADIKKYKPKASSLCSGQVLKEP-YTFEDARIVVGEMADELA 302 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYY---------------GNSASVKLLTPTQDSR 320 L + I+ + +++ Y G + SV L T T S+ Sbjct: 303 LDLVDKGFVTDSIALNVTYDRVNVDKGTYKGEIHVDRYGREVPQGLNKSVSLTTCTSSSK 362 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + A D +K + + + + G Q ++F D +++ M + Sbjct: 363 QLREAFLDIYDKYTDRKLYIRKLNLTVANLTNDGFQQFDMFTDQTQLEREKKMQHAMLDI 422 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRA 405 K G+ + A + ++R Sbjct: 423 KKKYGKNAVMKANNLQSKATAIERN 447 >UniRef50_B6HNR2 Pc21g13870 protein n=17 Tax=Leotiomyceta RepID=B6HNR2_PENCW Length = 611 Score = 303 bits (776), Expect = 1e-80, Method: Composition-based stats. Identities = 80/372 (21%), Positives = 148/372 (39%), Gaps = 23/372 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+A+ E + RP+L P+ V G + N A+ GV+ G F K L Sbjct: 114 VIHVDCDAFFAAVEELDRPELKRVPMAVG---KGVLTTCNYLARKFGVRSGMASFVAKKL 170 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDF 119 + +V NYE Y + + + + E P E SIDEA+ ++T N + + Sbjct: 171 CPQ--LVLLPQNYEKYTAKAKEIRAIMAEYDPLFESASIDEAYLNITAYCNENHLEPDEV 228 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R +RA +L+ T ++V GIA +AK+A++ K + ++ + + M L Sbjct: 229 VRRMRAEILETTKVSVSAGIAANAKIAKIASNINKPNGQFQ----VPNDRDAIMEFMRDL 284 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLE 238 V V GIGR ++L+++G+K D+ + K F + + G ++E Sbjct: 285 SVRKVNGIGRVFERELESIGVKKCGDIFPH-RALLTKLFGEKAFQFLAQCYLGLGRTKME 343 Query: 239 EFA-PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F I D +R + A + L R + +K F Sbjct: 344 PVETHERKSVSTETTF-HEIGDKEELRAKLWWAAQELEKDLARTQFKGRTLVLKVKLHTF 402 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGV 355 + + ++D+ + A L + + + + G+ + S Sbjct: 403 EV------LTRQTAPPRAVSLAKDLYSFALPMLAKLERDIPDMKLRLLGLRCSNLVSTQK 456 Query: 356 AQLNLFDDNAPR 367 +N F A Sbjct: 457 VGINFFGVAAQP 468 >UniRef50_B3PM57 Pol_IV_kappa DNA polymerase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM57_MYCA5 Length = 416 Score = 302 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 90/372 (24%), Positives = 159/372 (42%), Gaps = 24/372 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ +CE P L +PV + + + + E K LG++ GDP K K Sbjct: 8 IFHIDMDAFFINCERAIDPRLDNQPVAIGKVHKRSIATSVSYELKKLGLRPGDPSLKVKH 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNCR--DLT 117 L V+ +Y+LY+ S R+ LE + +EIYSIDE + ++T + N R Sbjct: 68 LCP--NVIFVEPHYQLYSSYSKRIFDYLETHYTHTIEIYSIDECYLEVTTILNNRKISAQ 125 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 EI+ +L + L +GI+ TK LAK++ + AK + + + K Sbjct: 126 ALAFEIQKNILDKFQLPCSIGISFTKFLAKMSTNKAKPFGILE------TKKQDIEKHFY 179 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLAD-TDIRFIRKHFNVVLERTVRELRGEPCLQ 236 L + +++G+G+ + KL GI T DL + + +F+R F + EL+G L Sbjct: 180 DLDIQEIFGVGKASTAKLKEYGINTYRDLVNEKNTQFLRSVFGKRFYSLILELKG-DNLH 238 Query: 237 LEEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + I S SF I D+ + + A +E+ + + I+ I+ + Sbjct: 239 DHVQNEEAKGISNSMSFIENNIADFNEISNCLYELAENVSERAKITNVEGSTITVMIRWA 298 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--Q 353 +S ++ T + DI N L+++W + G+ + + S Sbjct: 299 N------KNWSSKQKRIHFYTNEVNDIYNFGKDLLESLWDQS-AIRGIGIAISNLRSIFN 351 Query: 354 GVAQLNLFDDNA 365 +LF D Sbjct: 352 RDNAFDLFCDFK 363 >UniRef50_C8WH43 UMUC domain protein DNA-repair protein n=3 Tax=Bacteria RepID=C8WH43_EGGLE Length = 443 Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 140/438 (31%), Gaps = 39/438 (8%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E V R D +VV + +A KALG+ F+ Sbjct: 5 YVCIDLKSFYASVECVDRGLDPLTANLVVADPDRTEKTICLAITPSMKALGLSSRCRVFE 64 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR- 114 + V + Y + S + S V YSIDE F D T + Sbjct: 65 IPE---NVDYVMAKPRMQRYMEASADIYSIYLRFVSPEDVHPYSIDECFIDATPYLSLYR 121 Query: 115 -DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 +F + VL T + G+ LAK+A K R G L E +R Sbjct: 122 TSAREFAVMLMEAVLAETGVRATAGVGPNLFLAKVALDITAKHARDCIGF--LDQAEFER 179 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + + P+ D+W IG I+++L + + + + + + F V E + G Sbjct: 180 TIQTHRPITDIWNIGPGIARRLAKYAVYDLRGVCEMSEATLYREFGVNAEYLIDHAHGVE 239 Query: 234 CL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + P+ + + + R + + L + IS Sbjct: 240 PCTIADIHAYEPSGHSLGNGQVLPCD-YSFEEARDVLREMVDQLVLDLVEKRLVAGSISL 298 Query: 291 FIKTSPF----------------------ALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 ++ + + + ++ + T ++ Sbjct: 299 YVGYAKGPGERAGESDGAFFDGGHGRRPASGRRGFSHTGSTRRQADRTNLYSKLMPRFLD 358 Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 D + ++ V +G + A ++LF D +L + + + G+ Sbjct: 359 LFDETTRKDAPIRRINVGVGGVLPEEFATMDLFSDVEAEAEEHRLQQAVLAVKGRFGKNA 418 Query: 389 LYFAGQGIQQQWQMKRAM 406 L ++ +R Sbjct: 419 LLRGTSLKEKATARERNE 436 >UniRef50_C1E418 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1E418_9CHLO Length = 410 Score = 301 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 78/347 (22%), Positives = 140/347 (40%), Gaps = 22/347 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++AF+A+C T+ RP+L P+ V + N A+ GV+ P F L Sbjct: 83 WIHVDMDAFFAACHTLERPELASVPMAVGGM--SMISTANYVARKAGVRSAMPGFVAVKL 140 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV--RNCRDLTDF 119 +V ++ELY + + + S+DEA+ D+T R D + Sbjct: 141 CP--ALVFVRQDFELYQKYAAMLREVWRVYDKEFDCGSLDEAYLDVTEFMSRTGMDGGEV 198 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++R+ V +T LT G+A T+ LAK+ + K + V + E +S L Sbjct: 199 AAKLRSDVETKTRLTCSAGVAPTRRLAKICSDWNKPNGQF----VLERSREAVISFLSDL 254 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLE 238 PV V G+G+ + KL A I+T L + I F ++ G + Sbjct: 255 PVRKVGGVGKVLEGKLSAFQIRTCGQLRQ-SLNVIAAVFTPATIDFLFSVALGTG-TEQR 312 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F +D + + A A++L+ E+ + ++ IK S F Sbjct: 313 PPDAQRKGLGHERTFA-PTSDPRFIEAKLHGLAEDVAKELQKENLKAQTVTLKIKKSNFE 371 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 + +L P+ ++ +I A L + + GV Sbjct: 372 VM--------QRQLTVPSSNAAKVIAEAAILLLRKERPYGALRLVGV 410 >UniRef50_A2FMN4 ImpB/MucB/SamB family protein n=1 Tax=Trichomonas vaginalis RepID=A2FMN4_TRIVA Length = 519 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 81/357 (22%), Positives = 143/357 (40%), Gaps = 19/357 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 + CD+++F+AS E + P L G V + G + + EA+ GV+ G F Sbjct: 91 YMHCDLDSFFASVEALLDPSLKGTAFAVGGSVKRGIISTSSYEARKYGVRSGMAVFVAMK 150 Query: 61 LFRRCGVVCFSSNY-ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L N+ + Y + S +V ++ P + DEA D+T + N Sbjct: 151 LCPHLN--VVHYNHGDKYMNFSKQVQEVFKKYDPEFVSFGCDEATLDITPLLNDNLHSDQ 208 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++I+ V +T LTV +G+A T L+K+A+ K + N + + + Sbjct: 209 LAKQIQQEVFDKTKLTVSIGVAHTPQLSKIASDINKPNGIF----IVPKNDDDLKSFLHT 264 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + GIG + L +GI+T D+ I + R V E Sbjct: 265 LPVRKIPGIGGVNEQILKGIGIETCGDIL-LKKAEIWLTMSHKFCRFVFSAA-VGVQPRE 322 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + +Q I R+ D ++ + S A + ++K++ CR ++ K F Sbjct: 323 YESGPQQSISKDRTID-ATDDKCTLIDLVESLARKISKKMKKMRIACRNVAVKFKDINFK 381 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATR-SLDAIWQAGHRYQKAGVMLGDFFSQG 354 + S S T D D++NA+ + L+ + + + GV + S G Sbjct: 382 V------ISKSYTFDYDTSDESDLVNASLKLLLEERQERSIKLRLVGVKATNLTSPG 432 >UniRef50_B9DUB9 ImpB/mucB/samB family n=26 Tax=root RepID=B9DUB9_STRU0 Length = 475 Score = 300 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 84/452 (18%), Positives = 164/452 (36%), Gaps = 53/452 (11%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLS---NNDGCVIARNAEAKA----------- 46 A D+ +FYAS E + R + V+S N++G ++A + K Sbjct: 14 IAFVDMKSFYASIECIDRGLSPLRTSLCVMSRADNSNGLILASSPTFKRVFGKSNVGRSY 73 Query: 47 ---LGVKMGDPWFKQKDLFR--------------RCGVVCFSSNYELYADMSNRVMSTLE 89 + ++ + S + Y + + ++ Sbjct: 74 DLPFNIHTRRFNYRVAQREGWKVTTDFVNYIESWAKHTLIVSPRMDRYIEKNLQIQHIFH 133 Query: 90 ELSP--RVEIYSIDEAFCDLTGVRNC----------RDLTDFGREIRATVLQRTHLTVGV 137 E + + YSIDE+F DL+ N L I+ + + T + V Sbjct: 134 EFASPQDILTYSIDESFLDLSSSINYFIPSNELTRKEKLDALADRIQYRIWKETGIISTV 193 Query: 138 GIA-QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 G++ LAKLA K+ + + S + + K+ + D WGIG R++K+L Sbjct: 194 GLSNSNPLLAKLALDNDAKYAEKMR--ANWSYEDVEEKVWQIKQLTDFWGIGSRMAKRLQ 251 Query: 197 AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE-EFAPTKQEIICSRSFGE 255 +GI T+ LA+++ ++K ++ + G + + P + I S+ Sbjct: 252 KLGIFTIKTLANSNPDLLKKELGIIGLQLWFHANGVDESNVHQPYIPKARGIGNSQILPR 311 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 + + A A +LR + + ++ F+ S +P + P Sbjct: 312 DYILQSDIELVLKEMAEHVARRLRRKQKKATTVALFVGYSKGQSGKPINAQMK----IDP 367 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 ++ I ++ GH ++ GV Q + +LFDD + QL Sbjct: 368 ASSNKIISQTVIMLFRKHYK-GHIVRQIGVRCDGLVDQSLEVFSLFDDYEQKEKENQLEA 426 Query: 376 VMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 +DT+ + G +L A ++ +R+ L Sbjct: 427 TIDTIRDQFGVLSLQKASSLLEASRVAERSQL 458 >UniRef50_B3RS03 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RS03_TRIAD Length = 653 Score = 300 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 90/424 (21%), Positives = 145/424 (34%), Gaps = 81/424 (19%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P L KP+ V G ++ N A+ GV+ P F K L Sbjct: 88 IVHVDMDAFYAAIEIRDNPSLADKPMAVGGT--GMMLTSNYIARRYGVRAAMPGFIGKRL 145 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFC---------------- 105 +V N YA S V + L E P S+DEA+ Sbjct: 146 CP--DLVFVKPNSAKYAQASKEVRAILAEYDPNFASVSLDEAYMDLTEYLEGRKCTFPSS 203 Query: 106 ---------DLTG-------------------------------VRNCRDLTDFGREIRA 125 DLT V + D REIR Sbjct: 204 HVEFTVPQQDLTEDMLKILNEVAPPTVDGVDSYNNCSSNSSIRKVSFGHTIEDVMREIRF 263 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + ++T LT GI K LAK+ + K + ++ + M LP + Sbjct: 264 KINRKTKLTASAGIGPNKMLAKICSDWKKPNGQFKVEF----TRDKIIEFMRQLPTRKIS 319 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTK 244 GIG+ + L+ + I +L D I F+ V + + G ++ + Sbjct: 320 GIGKVSERLLNEIEISNCKELYDK-RDLIYLLFSNVSTKFFLAVAMGIGSNEVSSKNYQR 378 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 + I C R+FGE I+ M A ++ E+ R ++ +KT F + + Sbjct: 379 KSISCERTFGE-ISRLADMLVKCQKLCDNLANHMKKENITGRCLTVKLKTVAFEVKQ--- 434 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIW----QAGHRYQKAGVMLGDF----FSQGVA 356 SV L T + ++ N A+ + + R + G+ + + Sbjct: 435 ---RSVSLKHHTNSTTEMFNIASEVIRSERLACQPERLRLRLMGIKMSTLKRHESDEKSI 491 Query: 357 QLNL 360 Q L Sbjct: 492 QDTL 495 >UniRef50_C7DHN7 DNA-directed DNA polymerase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHN7_9EURY Length = 350 Score = 300 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 75/366 (20%), Positives = 137/366 (37%), Gaps = 23/366 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-----DGCVIARNAEAKALGVKMGDPW 55 + D++ F+A+CE P+L G+P+ V +++ G V N EA+ G++ G P Sbjct: 3 LVIYIDMDYFFAACEEKRHPELKGRPLAVGTSDSADKLRGVVQTCNYEARKYGIRSGMPT 62 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 K L++ + ++ Y ++SN +M L L +E SIDEA D+ G Sbjct: 63 LKAFQLYK--DLQYVKADDAYYEEVSNAIMEYLSSLGFPLEKMSIDEAAIDV-GDLGYGK 119 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + I+ + QR L +GI+ K AK+A AK T V L + Sbjct: 120 ANELAERIKEEIKQRLGLPCTIGISIGKVFAKMACDKAKPDGLLTLDEVHLH------EF 173 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + + V + G+G + +KL AMG+K++ D+ + D + F G Sbjct: 174 LKSTDVKKLPGVGSKSYEKLSAMGVKSIADIRNIDPLRLVDEFGSFGRELYALAGGIDES 233 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ I R+ + + + +L + ++ Sbjct: 234 KVVSEERVL-SISRERTLRGLEDQQKEIDSMLEVLSKEVIAELNKRKMEFGGVGVKVRYV 292 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F+ L + + + A + + +A +K GV + Sbjct: 293 DFSEKV------RDRSLSYYSNSYDVLYSNAVSMIRELSRANK-VRKIGVKAYRLGNMSG 345 Query: 356 AQLNLF 361 Q LF Sbjct: 346 -QKKLF 350 >UniRef50_C9RQ99 UMUC domain protein DNA-repair protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQ99_FIBSS Length = 466 Score = 300 bits (770), Expect = 6e-80, Method: Composition-based stats. Identities = 79/451 (17%), Positives = 150/451 (33%), Gaps = 47/451 (10%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +F+AS E V R D +VV + +A + KA G+ F+ Sbjct: 10 YVAIDLKSFFASVECVLRGLDPLSTNLVVADASRTEKTICLAVSPSLKAYGIPGRARLFE 69 Query: 58 QKDLFRRCG--------VVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDL 107 R + Y + S RV + + + + +YSIDE F DL Sbjct: 70 VIQKVREVKRQTGKDVEYIVAPPQMAKYVEYSTRVFNVYLKYVSADDIHVYSIDECFIDL 129 Query: 108 TGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW-QRQTGGV- 163 T + + +E+ VL+ T +T GI L K+A K GV Sbjct: 130 THYLSMYKKSARELAKEMIRDVLETTGITATAGIGTNLYLCKIAMDVMAKHVAPDADGVR 189 Query: 164 -VDLSNLERQRKLMSALPVDDVWGIGRRISKKL------DAMGIKTVLDLADTD---IRF 213 +L + +++L P+ W +GR I+++L + GI T+ DLA Sbjct: 190 IAELDEMTYRKELWGHRPITSFWQLGRGIAERLAHCYLNNGRGIFTMGDLARASVKHPDA 249 Query: 214 IRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 + K F V E + G +++++ I + D + I Sbjct: 250 LYKMFGVNAEILIDHAWGYEPCGIAEIKQYKSKTHSIGGGQVLSCA-YDCAKAKIVIREM 308 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYG---------------NSASVKLLTP 315 A L + ++ + +++ Y + L+ Sbjct: 309 VDTLALDLVEKGLVTNGLTLHVGYDRENVDKGIYHGETVIDNYGREIPKPAHGTAPLMNY 368 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 T + I A + D I ++ + + +LF D +++M Sbjct: 369 TSSASTIAEAVMKLADRIMNPLLTVKRLNLTANNVLEATQESYDLFTDVKKIEREKKMMQ 428 Query: 376 VMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 + + G+ ++ + +R Sbjct: 429 AQIAIKKRFGKNAIFKGMDMQEGATTRERNQ 459 >UniRef50_A5E4H3 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E4H3_LODEL Length = 1301 Score = 300 bits (768), Expect = 9e-80, Method: Composition-based stats. Identities = 74/405 (18%), Positives = 134/405 (33%), Gaps = 44/405 (10%) Query: 1 MFALCDVNAFYASCETVFRPDLW--GKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + P+L P+ V + V + N A+ GV+ G + Sbjct: 536 IIMHIDFDCFFATASCLKHPNLDIDRDPIAVGHGGETSDVASCNYVARKYGVRNGMWFRL 595 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCRD 115 + L + +E+Y S+ + L + + SIDE D + + Sbjct: 596 AQALCP--NLTLLDYEFEIYEKCSSEFYNYLVTSDYFDTIFPVSIDEVLVDASSYCFKSE 653 Query: 116 ------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 +T+ IR V Q T +V +G + LAKLA AK + Sbjct: 654 KPIEEAVTELCSLIRKHVFQLTKCSVSIGASFNVLLAKLAIKRAKPNGQFFL-------H 706 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT---VLDLADTDIRFIRKHFN-VVLERT 225 + K + +P+ D+ G G+ I +KL+ KT +LD+ + + + Sbjct: 707 KDIEKELFEVPIKDLPGFGKGILEKLEPEIDKTNPKILDIINLPRSRLILLVGEKTGTKL 766 Query: 226 VRELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 RG +E E ++ I +FG R + + A E++ Sbjct: 767 HEYARGIDNTSIEVDTSNPEAVLGRKSISVDVNFGIRFDTVEELDEFFMRLARELYERMV 826 Query: 280 SEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 + ++ + T+ F + S +L T D I N Sbjct: 827 NLGLCGSILTLKLAKRAPGADVVTAKFLGLGQVEFVNKSSRLGVATNDWGVIGNEIKVLY 886 Query: 331 DAIWQAGHRYQKAGVMLGDFFS----QGVAQLNL-FDDNAPRPGS 370 I + V + + Q+ L F A Sbjct: 887 RMINIPVKDLRGISVSMTKLKDVDSMKSSKQMTLPFGRAATNRNK 931 >UniRef50_C1A0W3 DNA polymerase IV n=9 Tax=Corynebacterineae RepID=C1A0W3_RHOE4 Length = 454 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 95/388 (24%), Positives = 154/388 (39%), Gaps = 30/388 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + RP L G+PV+V V+A + EA+ G + P + + Sbjct: 13 VLHLDMDAFFASAEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQARR 72 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAF---CDLTGVRNCRDLT 117 + G V LY+ +S R L P +E S+DEAF +L GV ++ Sbjct: 73 MV-GGGAVVLPPRMSLYSVLSKRTFDALRLRMPILEQLSVDEAFGEPVELAGVGAD-EVR 130 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 F ++RA + T L +G K +AK+A+ AK V + Q +L+ Sbjct: 131 AFCEDLRALIKAETGLVASIGAGAGKQVAKIASGLAKPDG------VAVIPPGMQHELLD 184 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQ 236 LPV +WGIG +KL +GI+T+ A T I + R +G Sbjct: 185 PLPVRKLWGIGPVAEEKLKRLGIETIGGFARTPIAEVASILGTTVGPGLHRLAQGIDDRP 244 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + E ++I +F I +R A+ S A +L + + R + +K S Sbjct: 245 VAE-RAESKQISAESTFAADIVTMAQLRAAVESSGRAAFSRLEKDGRAARTVVLKLKKSD 303 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH--RYQKAGVMLGDFFSQG 354 ++ + SV L T D + ++ A + + GV Sbjct: 304 MSI------LTRSVTLPFATIDRQILVATAQ---KQVIDPQELGPIRLVGVGFAGLS--T 352 Query: 355 VAQLNLFDDNAPRP---GSEQLMTVMDT 379 V Q +LF + E L +D Sbjct: 353 VRQGSLFPELDQDVPGYPVETLTGALDE 380 >UniRef50_C1DYT2 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1DYT2_9CHLO Length = 306 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 71/312 (22%), Positives = 126/312 (40%), Gaps = 29/312 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++ F+AS + RP+L G PV V S G + + N A+ G + G + Sbjct: 4 VILHVDMDCFFASVAALGRPELAGLPVAVSWSSAGGGELSSCNYLARNAGCRAGMRIARA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DL 116 K+L ++ +E Y+ ++ V TL ELSP V S+DEA+ D+TG+ C Sbjct: 64 KELCP--NLIVMPYEFERYSAVAIDVYRTLHELSPHVMGVSVDEAYVDVTGLAACGRKTP 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + ++RA + +T VG + +A+LA AK + Sbjct: 122 REIAEDVRAKIFAKTGCVASVGSGPNRLIARLATKRAKPDGSHH------VPASNASSFL 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIK---------------TVLDLADTDIRFIRKHFN-V 220 +++PV ++ G+GR +KL GI T D+A + +R+ Sbjct: 176 ASMPVAELPGVGRGTLEKLRREGIGSMVGAVGPMGTAGNPTCADVAAAPLSVLRRALGPK 235 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG E P ++ + ++G R + + A +E++R Sbjct: 236 AGAQLRDASRGIDARAW-EARPPRKSVGAQVTWGVRFEEAAEAVAFVEKLCAEVSERMRR 294 Query: 281 EHQYCRFISTFI 292 R ++ I Sbjct: 295 LRVKGRTLTLKI 306 >UniRef50_D2QRX3 DNA-directed DNA polymerase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRX3_9SPHI Length = 421 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 155/411 (37%), Gaps = 30/411 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 D+N+F+ASCE L G+PV V + +GCVIA + EAK GVK G + Sbjct: 14 VLFVDMNSFFASCEQQDNYWLRGRPVGVCVYTGRNGCVIAPSVEAKLRGVKTGMRLDQAI 73 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 L +V ++ Y + +++ L S V SIDEA DLT + +D++ Sbjct: 74 VLCPE--LVPIETHPGRYREYHVKIIDVLRTFSDDVVPKSIDEAVVDLTNYQLVYKDMSQ 131 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 I+ + Q+ L +GIA LAKLA++ K + + E ++ Sbjct: 132 TAVAIKQAIRQKVGDWLRCSIGIAPNVFLAKLASNVQKPDG------LTIITPETIDSVL 185 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 + + D+ GIG R++ +L+A G++T L+L +R ++ Sbjct: 186 QTMTLTDLPGIGHRMAARLEAGGVRTPLELRYATPDHLRAVCKSIIGWHWHIRLNFGGEV 245 Query: 237 LEEFAPTKQEIICSRSFGERIT-DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + P + + R+ + + + + S ++ +C+ +S + Sbjct: 246 DLDTNPDNKSMSAMRTISQEQRSTPERLDELLQSLCLTLERRMVQRGVFCQDMSFSCRYH 305 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA-------GHRYQKAGVMLG 348 + + P QD ++ L+ A + V + Sbjct: 306 NGK------TYNYEARFNEPKQDGLELYGIIRERLEKFQLAHRCEPVLNEHLRSMCVAVF 359 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 F V L+LF + + Q + L AK G L A + Sbjct: 360 RFIPAEVVPLSLFGNEDRKGKFRQ---TLYDLKAKFGTDKLIRATELRDNP 407 >UniRef50_Q09615 Protein ZK675.2, partially confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q09615_CAEEL Length = 1027 Score = 298 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 76/407 (18%), Positives = 140/407 (34%), Gaps = 37/407 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------VIARNAEAKALGVKMGDPW 55 D++ F+ S R DL K V + + V + + A+ GVK G Sbjct: 440 VFHVDLDCFFVSVAVRNRIDLKHKEVAITHSKGTISNSMSEVASCSYAARDCGVKNGMLV 499 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR- 114 + + +E Y +S ++ L + V S DE + +++ Sbjct: 500 RDALQKCPQLTL--LPYQFEDYVQVSRKIYEILASYTLEVRAVSCDEMYINMSSFCEKYE 557 Query: 115 --DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 D T IR + ++T VGI T LA+LA AK V N ++ Sbjct: 558 INDPTILAEHIRKVIREKTQCPASVGIGSTSLLARLATRHAKPDG------VFWVNAHKK 611 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAM--GIKTVLDLADTDIRFIRKHFN-VVLERTVREL 229 + +S V D+ G G + +L + I +L R + F + + +R+ Sbjct: 612 NEFISEEKVKDLPGFGYEMMNRLTSFFGDITKCRELQLKTERELVPVFGPKLASKILRQC 671 Query: 230 RGEPCLQLEEFA-PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 RG + +A ++ + C ++G R T + Q + + A KL I Sbjct: 672 RGIEEDPDDFWATHVRKSVSCDINYGIRFTKRGEVIQLMTAIGAELERKLIDSKLTAGSI 731 Query: 289 STF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 + I+TS F + + + L PT + + A + + Sbjct: 732 TLKLMVRSANAPIQTSKFMGHGICDTFTKTCNLNVPTTRGESLTSEAMKLYAKVSPKVED 791 Query: 340 YQKAGVMLGDFFSQ------GVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + GV G S+ Q +F + + ++ + Sbjct: 792 LRGVGVTCGKLKSKLKKDAATAVQ-EMFGKTSRVGNMARTDEQLNII 837 >UniRef50_D2RTA3 DNA-directed DNA polymerase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RTA3_9EURY Length = 443 Score = 298 bits (764), Expect = 3e-79, Method: Composition-based stats. Identities = 81/383 (21%), Positives = 144/383 (37%), Gaps = 38/383 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D + FYASCE + P L G+PVVV G V + EA+ GV+ Sbjct: 20 IVCHVDADCFYASCERLREPALRGEPVVVGMGYEPGETVGAVATASYEAREFGVESAQAI 79 Query: 56 FKQKDLFRRCGVV------------------CFSSNYELYADMSNRVMSTLEELSPRVEI 97 + R + + + Y +++ V L + + V Sbjct: 80 STALEHLPRRAALDPDADDHDPELTREETGFYRPVDMDYYESVASEVRDILHDCADVVRE 139 Query: 98 YSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ 157 SIDEA+ D+T F R I + + +TV VG+A T + AK+A+ K Sbjct: 140 VSIDEAYLDVTERTAWEVADGFARHITDRIRREVGVTVSVGVAPTMSAAKIASDFDKPDG 199 Query: 158 RQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKH 217 + + R+ ++ L VD + G+G +++L MG++T D+A D + + Sbjct: 200 ------LTVVRPGEVREFLAPLEVDLLHGVGPVTARELREMGLETAADVAAADPEPLVEA 253 Query: 218 FNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 F RG+ ++E + + + +++ + I + A+ A++ Sbjct: 254 FGERGRELYDRARGDDDRRVEPKGEP-KSFSRESASADPVSEPEPKYEQIETLASAVADR 312 Query: 278 LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 R E R + A+ PY N+ + L P D + A Sbjct: 313 ARREGALYRTVGVK------AVLPPYDVNTRARSLSGPVDDPDLVERIARDLFTEF--ET 364 Query: 338 HRYQKAGVMLGDFFSQGVAQLNL 360 +K GV + + Q +L Sbjct: 365 DPVRKVGVRVANLEFAAADQASL 387 >UniRef50_UPI0001745AF1 DNA-directed DNA polymerase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745AF1 Length = 405 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 98/398 (24%), Positives = 156/398 (39%), Gaps = 28/398 (7%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D+++F+AS E P L G+PV V+ + IA + EA+ GVK G + L Sbjct: 7 LDLDSFFASVEQQLDPRLRGRPVGVVPVKSESTSCIAASKEARRFGVKTGTRVRDARQLC 66 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDFGR 121 +V S LY + R ++ LE E+ SIDEA+C L V N F R Sbjct: 67 PE--IVFVESRPRLYTEFHQRFVTALESRIQVAEVMSIDEAWCLLPKSVTNRTQAEAFAR 124 Query: 122 EIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++AT+ + LT +GIA + LAKLA+ K + + + L Sbjct: 125 SLKATLTSQVGDWLTYSIGIAPNRFLAKLASDMGKPDG------LFMIEQADLPHCLHQL 178 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLE 238 + D GIG+++ +L A GI+TV L + + + LRGE E Sbjct: 179 KLRDFCGIGQKMETRLVAHGIRTVAQLTSATRETLHHVWGGIGGVHLWHWLRGE---VTE 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ I S R+ + C +AA +LR + + FIK + Sbjct: 236 PPPTQRRVIGHSHVLPTRLRNDLGTHAVSCRLLQKAAMRLRKMDHFTCRLELFIKYTNSP 295 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA-GHRYQKAGVMLGDFFSQGVAQ 357 TQD+ ++ A D + G + GV L Sbjct: 296 SWSSDISFC-------DTQDTFRLLEAFEVLWDRRPRRAGLEPKATGVNLSGLAPATKVT 348 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 +L + + +QL +MD +N + G+ + F G Sbjct: 349 PSLLEFDK---RQQQLCGLMDAINKRYGQNAVCFGGAL 383 >UniRef50_Q8RNE6 UmuC protein (Fragment) n=6 Tax=Proteobacteria RepID=Q8RNE6_ECOLX Length = 225 Score = 297 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 221/225 (98%), Positives = 224/225 (99%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD Sbjct: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV NCRDLTDFG Sbjct: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVHNCRDLTDFG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 REIRATVLQRTHLTVGVGIAQTKTLAKLAN+AAKKWQRQTGGVVDLSNLERQRKLMSALP Sbjct: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANYAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 VD+VWGIGRRISKKLDAMGIKTVLDLAD+DIRFIRKHFNVVLERT Sbjct: 181 VDEVWGIGRRISKKLDAMGIKTVLDLADSDIRFIRKHFNVVLERT 225 >UniRef50_C4M8P4 Deoxycytidyl transferase, putative n=2 Tax=Entamoeba RepID=C4M8P4_ENTHI Length = 708 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 68/367 (18%), Positives = 143/367 (38%), Gaps = 23/367 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D+++F+AS +L GKPVVV N+ V + N EA+ G+K G + + Sbjct: 172 IMHVDIDSFFASVTISKHTELQGKPVVVSHGGNNADVSSCNYEARKYGIKNGMWLKQAYN 231 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + ++ +++ Y ++ ++ L + +E+ S DE D++ V D+ F Sbjct: 232 LCPQ--LIVVGYDFDEYEKVALKMYEILTKYFHNIEVLSCDECIIDISSVPEPIDI--FL 287 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +++R + + H + GI A+LA AK L + +S + Sbjct: 288 QQVRIEIKETIHCGISFGIGINPLTARLAMKKAKPDGIYYL-------LSNIEEFISTIK 340 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 + ++ G G +S++ +G+ T D++ + K + + +G Q E Sbjct: 341 IAELPGFGYSLSEQCKIIGVYTCGDISLISKEVLEKQIGEKNTLKLIEMSKGIDNTQF-E 399 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS---- 295 K+ + S ++G R + ++Q I ++L + ++ I T Sbjct: 400 NKKEKKSVGISINWGIRFENDDDVKQFIFRMCCEVEKRLHKSNVMGTLMTMQIMTRKEGS 459 Query: 296 ----PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + + S S+ + TQ+S + +A + + + + Sbjct: 460 GEAIKYKGHGIVNMQSKSITICE-TQNSAILNKSAIILWNQFQIPIKDLRGISIQISKVH 518 Query: 352 SQGVAQL 358 S Q+ Sbjct: 519 SIQPVQI 525 >UniRef50_B0D0P7 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D0P7_LACBS Length = 420 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 76/328 (23%), Positives = 130/328 (39%), Gaps = 32/328 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AF+AS E ++ P+L GKP V G + + EA+ GV+ G P F K Sbjct: 106 IIVHVDMDAFFASVELLYNPELAGKPFGVG---RGVLTTASYEARKYGVRSGMPGFIAKK 162 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-- 118 L ++ S+N+ Y++MS +VM P + DEA+ ++T LT Sbjct: 163 LCP--DLILVSNNFSRYSEMSAKVMDIFRRYDPNMCPAGSDEAYLNITEYSVRHGLTAEV 220 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +E+R V T LTV GIA K K + + + M Sbjct: 221 CVQEMRKAVHAITQLTVSAGIAPNK---------NKPNGQFQ----IPFDSASIKAFMHH 267 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLA--DTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 L + V GIGR + L+++GIKT D+ I + K F L+ ++ G Sbjct: 268 LSIRKVPGIGRVNERLLESIGIKTCGDIYMHRVVISVMDKRFG--LKFLLQTHLGIASNI 325 Query: 237 LEEF-APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 +E ++ I R+F + D + Q + AA + + R ++ K Sbjct: 326 VEPHLREERKSIGAERTFSS-LGDKEKILQKLQEIAAELEKDMSRNGWTGRTVTLKYKLD 384 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDII 323 + + + + ++ Sbjct: 385 TYQV------FTRAKTFDRYVFTKEELY 406 >UniRef50_A5DN15 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DN15_PICGU Length = 1098 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 64/411 (15%), Positives = 136/411 (33%), Gaps = 48/411 (11%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D ++F+ + + P+L +P+ V V + N A++ G++ G+ + Sbjct: 406 VILHVDFDSFFVTASCLSHPNLDIKKQPIAVSHGTKTSDVASCNYVARSFGIRNGEWVGR 465 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRN--- 112 ++ +++ Y S + + L ++ V SIDE D T + Sbjct: 466 AMKKCPE--LIVIEYDFDAYERCSKELYNFLIDSKIFDSVFPVSIDEVLLDATTYCSNSF 523 Query: 113 -----CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + + D + IR V + T V VG + LAKLA AK + Sbjct: 524 SDSTFEQRVHDLSKMIRERVYELTSCPVSVGASYNVLLAKLALRKAKPDGQFQLF----- 578 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAM----GIKTVLDLADTDIRFIRKHFN-VVL 222 + + ++ + V+D+ G+G S+KL + I T ++ + + Sbjct: 579 --DNVEQFLTDIKVNDLPGVGYSHSEKLQEIMNTSSIPTAGEVRQLSLTKLINVLGEKTG 636 Query: 223 ERTVRELRGEPCLQL------EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 ++ RG + +E ++ + ++G R + A + Sbjct: 637 QKLYNYARGIDSTSINIDLTNKEAVLGRKSVSVDVNYGIRFDTVLQLDDFFMRLAKELYK 696 Query: 277 KLRSEHQYCRFISTFI-KTS--------PFALNEPYYGNSASVKLLTPTQDSRDIINAAT 327 +L S ++ + K + + S S +L PT D + + Sbjct: 697 RLISLGICGSQVTLKLAKRAAGAPVNPPKYLGMGRCDFVSKSSRLGIPTNDWGVVGSELK 756 Query: 328 RSLDAIWQAGHRYQKAGVMLGDFFSQG------VAQLNLFDDNAPRPGSEQ 372 + V + AQL + + ++ Sbjct: 757 SLYRMSQVPVQDLRGIAVTMTRLEDVDSLAKSKQAQLPFYRSSDGPVEKQK 807 >UniRef50_C5SGU5 DNA-directed DNA polymerase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SGU5_9CAUL Length = 425 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 86/402 (21%), Positives = 151/402 (37%), Gaps = 30/402 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+N+F+ASCE P L G+P++V+ + C IA + EAK LG+K G K Sbjct: 17 WLYLDMNSFFASCEQQADPCLRGRPLIVVPVDSEYTCAIAASQEAKRLGIKTGTQVKIAK 76 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TD 118 + + + + Y + +R++ ++ + P +I SIDE C L G Sbjct: 77 QICP--DLKVVQARPDEYVRIHHRILEEVDHVIPVEKICSIDEVACRLMGPETVEAAARA 134 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 G I+ +L LT +G+A ++ LAK A K + ++ + Sbjct: 135 LGHRIQRRILSNIGECLTASIGLAPSRMLAKTAADMQKPLGM------TVLRRDQLPGPL 188 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCL 235 + + D GIG +L GI L +R+ + + ++ LRG Sbjct: 189 LDIDIGDFPGIGPATKARLFRAGISDPRQLWHLSPSRMRQLWGGIGGDQFWYALRGVDPP 248 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++E + I S + + R A+ +LR C + I+ Sbjct: 249 EIET---ERGSISHSHVLAVELRPVEAARAVARRLTAKCGSRLRRMGYKCGGLHLSIR-- 303 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQ 353 G + + +L T DS ++ AA D + +K V Sbjct: 304 -----GTQEGRAQAERLFMATADSFRMLEAADALWDVCVRTLNQTSIKKVSVTCMRLVPA 358 Query: 354 GVAQLNLF---DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 A +LF P +L+ +D LN + G+ + Sbjct: 359 DTA-PDLFGYSPAADEDPRHMRLLEAIDALNQRFGKDRISIG 399 >UniRef50_C2D8D4 Possible DNA-directed DNA polymerase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8D4_9ACTN Length = 466 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 73/427 (17%), Positives = 135/427 (31%), Gaps = 28/427 (6%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ FYAS E R + + +VV + G +A KA GV+ ++ Sbjct: 39 YMCIDLKTFYASVECADRGLNPFTTNLVVADPDRGEGTICLAVTPALKAQGVRNRCRVYE 98 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRD 115 + + Y D+S R+ S E+ + YSIDE F + + Sbjct: 99 IPK---DITYLKVKPRMQHYVDVSARIRSIYEQFCAPCDIFPYSIDECFIYIAPYIKRYN 155 Query: 116 L--TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + + + V ++ H+ GI LAK+A K G+ L+ R Sbjct: 156 MSSQQIAQMLIDAVYEQEHICATAGIGSNMFLAKIAMDIIAKHNNAHMGI--LTKTLFYR 213 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + P+ D+WGIG ++KL G+ + + + + F + + G Sbjct: 214 DIWHHRPLTDIWGIGSSTAQKLARYGVFDLHGVCGIPNEIMLREFGIGAHTLIHHAWGLD 273 Query: 234 ---CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 ++ + P Q I + + + +L E C I+ Sbjct: 274 LCTITSIKAYKPQHQSISNGQVLMRD-YSEAEAKSICKEMIYDSCLRLIEERNTCSCITL 332 Query: 291 FIKTSPFAL-----------NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 + + L + S L T + D Sbjct: 333 EVMYTNTPLAQINSIDSVYLKNRQHTLHCSHTLSYHTASRSILEQILDTLWDTRVDKDRL 392 Query: 340 YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +K + LG+ Q LF+ + +L + K G+ +L + Sbjct: 393 IRKICITLGNLKPQAQVTPTLFEGDESHTNEYKLAHATLAVKHKYGKNSLLRGTSLLPHA 452 Query: 400 WQMKRAM 406 +R Sbjct: 453 TGRQRNQ 459 >UniRef50_B4WAK0 ImpB/MucB/SamB family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WAK0_9CAUL Length = 433 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 91/406 (22%), Positives = 160/406 (39%), Gaps = 26/406 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAF+AS E PD G+PV+V + IA + E+KA GV G + + Sbjct: 13 WLFVDLNAFFASVEQQMNPDWQGRPVIVRPAMSEYTGAIAASYESKAWGVHTGMRVSEAR 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L G++ + +LY + ++M+ ++ P ++ SIDE C+L G + Sbjct: 73 KLCP--GLIVAEARPDLYVAVHKKIMAEIDRHVPVWKVGSIDECSCELLGPERQEANAVA 130 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 R I+A +L+ L +G+A ++ LAK A K + + + Sbjct: 131 LARRIQAGILENVGDCLRSSIGLAPSRFLAKTACGMKKPAG------LTILRANELPGPL 184 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCL 235 LP+ GIG R+ +L+A G+ L R R + ++ ER R L G Sbjct: 185 LDLPLSKYPGIGPRMRLRLEAAGVADTAGLWTMSARQARAVWNSIEGERIWRGLHGLDSE 244 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI--- 292 E P I S + + R + +LR ++ + Sbjct: 245 PTPEKPPA--SISHSHVLAQAMRTPDKARALARRLVVKCGARLRRMGLTGASLTLHLDMG 302 Query: 293 -KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK--AGVMLGD 349 K +P + + + S + PTQD+ ++ A + + GV + Sbjct: 303 PKATPRSDRRGWETAAMSCPVA-PTQDTFALLTALDVLWRKVEPELEAGRLSYVGVGVHG 361 Query: 350 FFSQGVAQLNLFDDNAPRPGSE---QLMTVMDTLNAKEGRGTLYFA 392 S+ + +LFD + G +L +D LN + G+ T+ Sbjct: 362 LKSRDAFETDLFDTGPDQGGEAPSLRLSQALDALNRRYGKDTVSIG 407 >UniRef50_B0UY97 Novel protein similar to vertebrate REV1 homolog (S. cerevisiae) (REV1) n=3 Tax=Danio rerio RepID=B0UY97_DANRE Length = 1268 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 121/326 (37%), Gaps = 21/326 (6%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + + + EA+ GV+ G + + K L + ++ Y +++ + L + +E Sbjct: 547 IASCSYEARQAGVRNGMFFGRAKQLCP--DLQSVPYDFHAYKEVALAMYEILASYTHNIE 604 Query: 97 IYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DEA D T + + R IR + ++T VG++ LA++A AK Sbjct: 605 ALSCDEALVDATALLVELGVSPDELARSIREDIKEKTGCCASVGMSSNILLARMATRKAK 664 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + L E + PV + G+GR +S KL ++G+ T DL + + Sbjct: 665 PKGQY------LLRSEEVDDFIRDQPVSSLPGVGRSMSSKLTSLGVSTCGDLQQLSLSQL 718 Query: 215 RKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 ++ F + R RG + ++ + ++ R T + + + Sbjct: 719 QREFGPRTGQTLFRFCRGLDDRPVRSEK-ERKSVSAEMNYNIRFTQVEEAESFLNNLSME 777 Query: 274 AAEKLRSEHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 ++L R ++ + + + + + SV L PT R I + Sbjct: 778 VQKRLEGAGLRGRRVTLKVMMRKPGAPVEPAKYGGHGICDNFARSVLLAQPTDSGRVIAS 837 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDF 350 A + A+ + G+ + Sbjct: 838 EAIKLFHAMKLNVKDMRGVGLQVQQL 863 >UniRef50_A8IAM0 DNA polymerase kappa (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8IAM0_CHLRE Length = 429 Score = 295 bits (755), Expect = 3e-78, Method: Composition-based stats. Identities = 74/357 (20%), Positives = 133/357 (37%), Gaps = 28/357 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ +P+L PV V G + N A+ GV+ P F K L Sbjct: 90 WLHVDMDCFYAAVHEREQPELKRLPVAVGGM--GMISTANYVARRFGVRSAMPGFIGKRL 147 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV--RNCRDLTDF 119 + +V ++ Y + + V ++L P E +DEA+ D+TG R + Sbjct: 148 CPK--LVFVKPDFAKYTEAAAVVRGAFKQLDPDFESGGLDEAYLDVTGYCTRTATSGEEA 205 Query: 120 GREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+R V + + LT VG+A K LAK+ + K + V ++ + Sbjct: 206 ATELRRLVKEVSGGLTCSVGVACNKMLAKICSDINKPDGQY----VLPASRAAVMSFLDT 261 Query: 179 LPVDDVWGIGRRISKKLDA-MGIKTVLD-LADTDIRFIRKHFNVVLE-RTVRELRGEPCL 235 LPV + IG+ + L +G+ T LA + F+ + G Sbjct: 262 LPVRKIPCIGKVTEQVLQGVLGVSTCGQLLAPASRCRLPLLFSEAAAGFFLEAALGLAPT 321 Query: 236 QLEE-----FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + P ++ + R+F ++ + E R I+ Sbjct: 322 RHGPKTDTSVDPGRKGLSHERTF-RNMSAPAEQEAMAKQLVEALVADMAEEGIEGRNITL 380 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 +K S F ++ + + + + DI+ A R L A + + GV + Sbjct: 381 KLKLSTFEVH------TRAATMPRHVRTVSDILPAVLRLLRA--EMPVTLRLMGVRM 429 >UniRef50_D1AVL7 DNA-directed DNA polymerase n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AVL7_STRM9 Length = 421 Score = 294 bits (754), Expect = 4e-78, Method: Composition-based stats. Identities = 74/418 (17%), Positives = 146/418 (34%), Gaps = 21/418 (5%) Query: 1 MFALCDVNAFYASCETV-FRPDLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++A D +FYAS E D + +VV G +A K GVK F Sbjct: 8 VYACIDFKSFYASVECAERNLDPFTTNLVVADETRGNGAVTLAITPYMKKQGVKNRCRIF 67 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR 114 + + + +LY S + + + IYSIDE F +LT Sbjct: 68 QIPE---DIEYIKAMPRMKLYMKYSAEIYAIYLRYIAPEDIYIYSIDECFIELTPYLKLY 124 Query: 115 D--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + D I+ + + + GI LAK+A K + G++DL+ + Sbjct: 125 NMRAKDIVIMIKNAIFEEMKIPSSAGIGTNLFLAKVALDVVAKKVKDEIGMLDLNR--FK 182 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 + + P+ D+W IG+ I+K+L+ G+ + L+ D + F + G Sbjct: 183 KYIWKHRPITDIWNIGKGIAKRLEKYGVYDLYSLSLMDEEILYNEFGENALFLIEHSHGI 242 Query: 233 PCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 +++ + + I S+ + ++ + + +L + + I Sbjct: 243 EPCTIAEIKAYKSKTKSISNSQILFDD-YNFEDAKMIMLEMLDNLVLELVAFNYTIDNIY 301 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 ++ S S S K+ T R + T + + ++ + L + Sbjct: 302 LGVRYS----GIDKKRVSGSKKIGIRTNSFRKLSKIYTEFFNEKVDKSLKIKQITLSLNN 357 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 Q +FD+ +E+ + + K G+ + ++ R L Sbjct: 358 VLEDAWIQKEIFDETHLDEKNEKAQKAILEIKEKFGKNAILKGRSINEKSTAKARNKL 415 >UniRef50_Q4Q8C4 DNA polymerase kappa, putative (Dna polymerase iv, putative) n=3 Tax=Leishmania RepID=Q4Q8C4_LEIMA Length = 598 Score = 293 bits (752), Expect = 7e-78, Method: Composition-based stats. Identities = 74/356 (20%), Positives = 124/356 (34%), Gaps = 16/356 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ E P L GKP V S + N A+ GV+ G P F K L Sbjct: 145 YIHIDMDMFYAAVEEKKTPSLRGKPFGVGSQQ--MLSTTNYIARQYGVRSGMPGFIGKKL 202 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR---DLTD 118 ++ +++ Y + RV S + +DE D+T +D Sbjct: 203 CPE--LIIVPNDFPAYQREAARVHSIASRYDAQFVSVGLDELTMDVTKYLQEFPAVSASD 260 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + R V +T LT GI T LAK+A++ K + L E + Sbjct: 261 IAHDFRDEVFLKTQLTSSGGIGPTSILAKIASNVNKPNGQHEI---TLLTREEVINYVRD 317 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 +P+ + GIG L A+ I T L + L + G Sbjct: 318 IPLRKIPGIGYAQEMTLGALHIHTCGGLLEHKYLLAYLFREKTLAHYLSVGLGLAETFSL 377 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 +Q + SF E + + + + + +H R ++ +K + Sbjct: 378 RKHQARQSVGKETSFSEPLPSPEAFTRLFRKLLEQCHVRCVRDHLQPRKMTLVLKYRTYD 437 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + SV L + T D + + A+ + L+ + GV L F Sbjct: 438 TEQF------SVTLPSHTNDLKVWLEASQKLLEPHLLHYAELRLIGVRLQRFTDID 487 >UniRef50_C7I020 DNA-directed DNA polymerase n=1 Tax=Thiomonas intermedia K12 RepID=C7I020_THIIN Length = 415 Score = 293 bits (752), Expect = 7e-78, Method: Composition-based stats. Identities = 97/411 (23%), Positives = 169/411 (41%), Gaps = 23/411 (5%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKD 60 L D N+++AS E P+L G+PV V+ + C IA + EAKA GVK G + + Sbjct: 6 LLVDFNSYFASVEQQLCPELRGRPVGVVPMLADTTCCIAASYEAKAFGVKTGTQVAEARR 65 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L G+V + + Y + +R ++ ++ ++P ++ SIDE C L G + T Sbjct: 66 LCP--GIVFVVARHAEYVQIHHRAVAVVDTIAPVEQVLSIDEMACSLPMGWTSRERATQL 123 Query: 120 GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 ++A + + L V VGIA LAK A++ K + + + + Sbjct: 124 ALRLKAALREALGECLRVSVGIAPNVFLAKQASNLQKPDG------LVVIDAGDLPGPLL 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQ 236 + + D+ GI R+ +L A GI +V L +R + + E L G Sbjct: 178 RMQLTDLTGINVRMLARLQAQGIHSVEHLWRARREQLRVVWGGMAGEAFYDRLHGLASG- 236 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK-TS 295 + A ++ + S + + +AA +LR EH ++ +K T Sbjct: 237 -VQAANPRRSLGHSHVLPPEMRSAEGALAVLDRLTQKAAMRLRREHLLAGAMTVMLKLTR 295 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + PT D+R +++ + AG K ++L D G Sbjct: 296 RHGERLRPERGAR----FAPTADTRALLHTLRELWPGMVPAGWAPMKVAMLLHDLRQPGQ 351 Query: 356 AQLNLFDDNAPRPGSEQ--LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 +LF+ + P +EQ L + +D LN + GR T+Y ++ R Sbjct: 352 TSASLFEGDVPGTEAEQAALWSAVDALNVRYGRHTIYCGSGHQGREEAPMR 402 >UniRef50_C4XZD9 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XZD9_CLAL4 Length = 1124 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 67/448 (14%), Positives = 140/448 (31%), Gaps = 65/448 (14%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + P+L P+ V V + N A+A GV G Sbjct: 426 IIMHIDFDCFFATISALAHPNLDINKDPIAVSHGGKSSDVASCNYVARAKGVSNGMWLGT 485 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCRD 115 K ++ Y SN+ + L + + + SIDE D+T N D Sbjct: 486 AKTHCPELN--VLDYDFVAYESASNKFYNYLIGKNVFDTIFPVSIDEVLVDVTSFCNQGD 543 Query: 116 L----TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + EIR+ + + T V +G ++ LAKLA AK + + Sbjct: 544 IVKNVESLSSEIRSDIYKLTKCPVSIGASKNVLLAKLATRKAKPRGQFYLY-------DD 596 Query: 172 QRKLMSALPVDDVWGIGRRISKKL-DAMGIKT---VLDLADTDIRFIRKHFN-VVLERTV 226 + L + D+ G+GR ++ KL + M + + + + + + F + Sbjct: 597 IESFLDDLTLKDLPGVGRGLTAKLAEEMDCGSQVLIRHVKSLPLDKLIRIFGEKTGSKIF 656 Query: 227 RELRGEPCLQL------EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG + E ++ + ++G R + + + + + ++L Sbjct: 657 QNCRGIDTTSISLDFSSVESLLGRKSVSVDVNYGIRFDTFEQVETFLMNLSKELYKRLSD 716 Query: 281 EHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 ++ + + S S +L PT D + + Sbjct: 717 LKLCGSSLTLKLAKRHPNAPVNPPKYMGMGLCTFLSKSSRLGIPTNDWGIVGSEIRSLYR 776 Query: 332 AIWQAGHRYQKAGVMLGDFFS----QGVAQLNL------------------FDDNAPRPG 369 + + + + + Q L F P Sbjct: 777 MLNVPPQELRGIAISMTKLQDIEQMKSHRQRTLEFNRAKNMRRQVKANSQEFPFAEPVSN 836 Query: 370 SEQLMTVM-----DTLNAKEGRGTLYFA 392 ++ + + D + + + L Sbjct: 837 AQSIDWAVFNQLPDAIRNELKKELLRRG 864 >UniRef50_Q1Q0T1 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0T1_9BACT Length = 348 Score = 293 bits (750), Expect = 1e-77, Method: Composition-based stats. Identities = 74/328 (22%), Positives = 138/328 (42%), Gaps = 29/328 (8%) Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFGREIRATVLQRTH-LTVGVGIAQTKTL 145 +P +E+YS+DE F D+ G + + ++I+ + + LT +GIA K L Sbjct: 21 YSRYTPAIEVYSVDEVFLDIAGSIPLFNSIEHIAKKIKQDIHKHLGRLTCSIGIAPNKLL 80 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD 205 AKL + K + + + R L+ LPV ++WGIG +++K L A+GI T + Sbjct: 81 AKLGSDMKKPDG------LFIIEEKDIRSLLENLPVQELWGIGPKLAKHLAAIGITTCGE 134 Query: 206 LADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK--QEIICSRSFGERITDYPSM 263 L + ++ F ++ ER V +G + + + S + + I D ++ Sbjct: 135 LGRAQVTQLKHTFGIIGERLVLIAQGIDDSPVIPSEKESDAKSVGHSMTLEKDILDKETI 194 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII 323 + I + ++R R ++ I+ S F+ + S + TP D +I Sbjct: 195 ERMILQLSEMVGRRMRKGGYSGRTVTLTIRYSDFS------TLTKSKTIGTPINDGLNIY 248 Query: 324 NAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 A L+A + H + GV L + + Q+ LF ++++ VMD +N + Sbjct: 249 LVACDILNAT-RPCHPIRLLGVCLSNL-HKDYTQIPLF---PAERTKQKVVRVMDEINNR 303 Query: 384 EGRGTLYFAGQG--------IQQQWQMK 403 G ++ I W+ K Sbjct: 304 YGEFSITSGTLMNRYHHKGVISPAWRPK 331 >UniRef50_UPI00006A0370 DNA repair protein REV1 (EC 2.7.7.-) (Rev1-like terminal deoxycytidyl transferase) (Alpha integrin-binding protein 80) (AIBP80). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A0370 Length = 1225 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 70/419 (16%), Positives = 132/419 (31%), Gaps = 81/419 (19%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S RPDL GKPV V SN Sbjct: 405 IIHVDMDCFFVSVAIRNRPDLKGKPVAVTSNRGAGTTTTREGANPQLEFQYYQNRILKGK 464 Query: 37 ----------------------------VIARNAEAKALGVKMGDPWFKQKDLFRR---C 65 + + + EA+ + K R+ C Sbjct: 465 ADQPTSISSDSAQQNGLDLDISHLSMAEIASCSYEARYCIKRNRSKISKIYYCCRKAVSC 524 Query: 66 GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREI 123 G++ + S + ++ + +E S DEA D+TG+ + I Sbjct: 525 GIIFYFSQ----IQLKKKIF--FAFYTHDIEAVSCDEALADITGILTETRLTPDEASNAI 578 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 R V ++T VGI LA++A AK + E + V++ Sbjct: 579 RTEVKEKTGCAASVGIGSNILLARMATRRAKPDGQYHL------KPEEVDDFIRGQLVNN 632 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAP 242 + G+GR I KL +G+KT DL + + ++K F + R RG + + Sbjct: 633 LPGVGRTIEYKLSCLGVKTCGDLQNITMAKLQKEFGPKTGQMLYRFCRGLDDRPIRKEK- 691 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT-------- 294 ++ + ++G R T + + + +L + ++ I Sbjct: 692 ERKSVSAEINYGIRFTQTSEAEAFLINLSEEIQRRLEVVGMKGKKLTLKIMVRKAGAPIE 751 Query: 295 -SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + + + + +V L T ++ I A + + G+ + Sbjct: 752 PAKYGGHGICDNVARTVTLHQATASAKVIGKEAVDMFHTMKLNISDIRGVGLQMHQLVP 810 >UniRef50_Q4D5I0 DNA polymerase kappa, putative n=4 Tax=Trypanosoma cruzi RepID=Q4D5I0_TRYCR Length = 604 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 76/366 (20%), Positives = 126/366 (34%), Gaps = 25/366 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ E P L P+ V + + + N A+ GV+ G P + L Sbjct: 159 YVHVDMDMFYAAVEMKKNPSLVDVPLGVGTFD--MLSTTNYVARRYGVRSGMPGYIGVKL 216 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR---DLTD 118 +V ++ + Y + V P +DE ++T D Sbjct: 217 CPS--LVIVPTDLDAYHAEAAVVRGIAAAYDPNFTSVGLDELTMEVTAYLQQHPGMTAGD 274 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E RA V T LT GI T TLAK+A++ K + + L + + M Sbjct: 275 VASEFRARVFAETQLTASAGIGPTATLAKIASNYEKPNGQHE---LRLRTRQDVMEFMKD 331 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL- 237 LPV V GIGR L +GI + ++ D + + G Sbjct: 332 LPVRTVPGIGRSTESILHGLGINLLGEIYDRRVELCYILTEKTFCFLLGSSMGVVRWMDA 391 Query: 238 -------EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 ++ I R+F ++ ++Q S A +L +CR I Sbjct: 392 DTNDGSERTTEAERKSIGMERTF-RNLSSRLELQQIAHSALQTAHRRLEENELFCRQIVL 450 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 K + F +++ S L + D + L I + GV L D Sbjct: 451 KTKRASFQVHQY------SKNLPQHSDDLETLRRGVDELLLRIADQYAFLRLVGVRLADI 504 Query: 351 FSQGVA 356 ++ Sbjct: 505 ITKSEY 510 >UniRef50_C4R1P8 Deoxycytidyl transferase, forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p n=1 Tax=Pichia pastoris GS115 RepID=C4R1P8_PICPG Length = 958 Score = 291 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 72/404 (17%), Positives = 135/404 (33%), Gaps = 42/404 (10%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWF 56 + D + F+A+ + PD+ +P+ V G V + N A+ GV G Sbjct: 295 IIMHIDFDCFFAAVSALSHPDIDFANEPIAVSHGGKGSSDVSSCNYAARKFGVSNGMWVN 354 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-VEIYSIDEAFCDLTGVRNCRD 115 + +L + +++LY + S L + P + S+DEA L+ + + Sbjct: 355 RALELCPE--LKILDYDFKLYEEKSKIFYEELTRIEPDCIFPVSVDEALIGLSSIDDEES 412 Query: 116 -LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 L + ++R + T TV +G + LAKL AK G+ Sbjct: 413 TLLNICEKLRNKIYVLTGCTVSIGASYNVLLAKLCLRKAKPN-----GIFFFFQPNNVGN 467 Query: 175 LMSALPVDDVWGIGRRISKKLDAM---GIK---TVLDLADTDIRFIRKHFN-VVLERTVR 227 + +PV + GIGR+I +L G K T+ +L+ + K F + Sbjct: 468 FLKNIPVKQLPGIGRKIEDRLSNHLNKGSKETVTISNLSSVSRDTMVKFFGIKTGTKLFG 527 Query: 228 ELRGEPCLQLE----EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 +G ++ ++ I ++G R + + + A ++L Sbjct: 528 YCQGLDDTDIDISKNPSKFIRKSISIDVNWGIRFEKQTQVDEFLSRVADHICQRLLRLGF 587 Query: 284 YCRFISTFI--KTS-------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 + + +T + S S L PT++ I I Sbjct: 588 VGARLMLKLARRTKGAPIDPPKYLGMGLCDFLSKSTNLGAPTREVGLIATELKSLYRIIG 647 Query: 335 QAGHRYQKAGVMLGDFFS--------QGVAQLNLFDDNAPRPGS 370 A + V + + QL F+ P+ Sbjct: 648 VAIADLRGVSVTISELQKCDSDATSAVDQKQLQ-FEAKKPKEKK 690 >UniRef50_Q0F3E1 ImpB/MucB/SamB family protein n=2 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3E1_9PROT Length = 366 Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats. Identities = 91/358 (25%), Positives = 156/358 (43%), Gaps = 16/358 (4%) Query: 38 IARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEI 97 IA+ +AKA G+K G P + K L S+++ Y +S ++ S L SP +E+ Sbjct: 2 IAKTYDAKAAGIKTGMPIWDAKKLMPHAT--YLSADFRFYGLISEKMFSILRRYSPDMEV 59 Query: 98 YSIDEAFCDLTGVRNC--RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 YSIDE F DL G R +D +IR V + +TV VG++ T+ LAK+A+ K Sbjct: 60 YSIDEGFLDLNGTRQLWKKDYKGIAHDIRRAVHREVGITVSVGVSVTRILAKIASEYNKP 119 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 V + + + + + DV GIGR L+ I T +D + DI I+ Sbjct: 120 NG------VTIVPSSMIQLFLKRVKLSDVCGIGRNRLATLNKFSIHTPMDFVNADIEVIK 173 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + E++G + LE A + + + S GE + ++ + + +R A Sbjct: 174 QLLGKAGTDLWHEMKGTMAIGLELHAQLPKSMARTASMGEVTGNRKTIISHLIRHTSRLA 233 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 +L ++ + I+ F++ F+ SA PT + + + + ++Q Sbjct: 234 TELVTKRLLTKRITIFLRLKDFS------SLSAQADFEYPTNNYFRLSRSVQAMMADLYQ 287 Query: 336 AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 Y+ G++ + + +LF + MD +N K GRGTL AG Sbjct: 288 PNELYRACGIIAESITNAEDSMPDLFGVMKTDAKQASIFATMDDINKKYGRGTLRVAG 345 >UniRef50_B7AW77 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B7AW77_9BACE Length = 519 Score = 290 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 87/508 (17%), Positives = 155/508 (30%), Gaps = 104/508 (20%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWF 56 ++ D+ +FYAS E R D +VV + +A + KA G+ F Sbjct: 5 IYIAIDLKSFYASVECRERGLDPLTTNLVVADASRTEKTICLAVSPSLKAYGIPGRARLF 64 Query: 57 KQKDLFRRCG-------------------------------VVCFSSNYELYADMSNRVM 85 + R + LY + S R+ Sbjct: 65 EVVQKVREVNAMRRTAAGGHRLSESSSDAAVIAADPDVAVGYITAPPRMALYMEYSTRIY 124 Query: 86 STLEELS--PRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQ 141 + + V +YSIDE F D + + ++ V ++T +T GI Sbjct: 125 NIYMKYVAPEDVHVYSIDEVFIDASPYLGTYGITARELASKMIRDVYEQTGITATAGIGT 184 Query: 142 TKTLAKLANHAAKKWQRQTGG---VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 L K+A K R + L ++KL + P+ D W +GR +KKL+ Sbjct: 185 NLYLCKIAMDIEAKHARPDEHGVRIAFLDEKAYRKKLWNHRPITDFWRVGRGYAKKLEEK 244 Query: 199 GIKTVLDLADTD---------IRFIRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQE 246 GI T+ D+A + K F V E + G Q++ + P Sbjct: 245 GICTMGDIARCSVGRPGDFYNEELLYKMFGVNAELLIDHAWGYEPCTMAQIKAYRPESNS 304 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS----------- 295 I + DY R + A + A L + + I Sbjct: 305 IGSGQVLHCP-YDYTGTRLVVREMADQLALDLAGKGLVTDQLVLTIGYDIDNLSNADIAR 363 Query: 296 PFALNEPYYGNSASV--------KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA---- 343 + + L T SR +I++AT+ + I G ++ Sbjct: 364 NYHGEVTADRYGRRIPKPAHGTGNLPVCTSSSRILIDSATKLYERITNPGLLIRRINITA 423 Query: 344 ----------GVMLGDFFSQGVAQLNLFDDN----------------APRPGSEQLMTVM 377 G+ + ++ QL+LFD +++ + Sbjct: 424 NHVVPHSAEPGISAHNNTTEKYEQLSLFDTPGFDGYDERKKQEDKMQDIIEKDDRMQQAV 483 Query: 378 DTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 + + GR + + ++R Sbjct: 484 LDIKKRYGRNAILKGMNYEEGATTIQRN 511 >UniRef50_UPI0000167505 COG0389: Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Bacillus anthracis str. A2012 RepID=UPI0000167505 Length = 318 Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats. Identities = 68/331 (20%), Positives = 131/331 (39%), Gaps = 17/331 (5%) Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + L + +++ SIDE + D+T + + I+ +L L +GIA Sbjct: 1 MFQILSRFTEKIQPVSIDEGYLDITDCYALGSPLEIAKMIQQALLTELQLPCSIGIAPNL 60 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 LAK A+ K + + +++ LPV + GIG + ++KL+ + I+T+ Sbjct: 61 FLAKTASDMKKPLG------ITVLRKRDIPEMIWPLPVGAMHGIGEKTAEKLNDIHIQTI 114 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP-TKQEIICSRSFGERITDYPS 262 LA + IR R +G +++ + + S +F + + + Sbjct: 115 EQLAKGNEHIIRAKIGKHGVDLQRRAKGMDDREVDPSQMGQHKSVGNSMTFSKDMDEEKE 174 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + + + +++L+ I IK + S +L + RDI Sbjct: 175 LLDMLQRLSKSVSKRLQKRTLVSYNIQIMIKYHD------RRTVTRSKQLKNAIWEERDI 228 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFF--SQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 AA+R W G + GV + ++ V QL+LF E L+ V+D + Sbjct: 229 FQAASRLWKQHWD-GDSVRLLGVTATEIEWKTESVKQLDLFS-FEEDAKEEPLLAVIDQI 286 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 N K G L Q +++Q + + L ++ Sbjct: 287 NDKYGMPLLQRGSQLLRKQEKSFQQKLESKF 317 >UniRef50_B8P0X5 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R RepID=B8P0X5_POSPM Length = 527 Score = 287 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 70/356 (19%), Positives = 133/356 (37%), Gaps = 44/356 (12%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E + P L GK + EA+ GV+ G P F K L Sbjct: 92 IVHVDMDAFYASVELLDDPSLEGKAFA------------SYEARKYGVRSGMPSFIAKKL 139 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DF 119 ++ +++ Y ++S +VM+ P + DE + ++T + LT + Sbjct: 140 CP--DLILVENHFHRYMELSKKVMNIFRRYDPSMCAAGCDEGYLNITAYCRDQQLTADEC 197 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R++R TV Q T LTV GIA K K + T + M L Sbjct: 198 VRQMRETVYQETKLTVSAGIAPNK---------NKPNGQFTLDF----EPRAIKAFMRNL 244 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLA--DTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 + + G+GR + LD++GIKT D+ + + K F L+ ++ G + Sbjct: 245 SIRKIPGVGRVNERLLDSIGIKTCGDIYTHRVVVSLMDKEFG--LQFLLQTYLGIASNVV 302 Query: 238 EE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + ++ I R+F + + ++ + AA + S + ++ K Sbjct: 303 QPGQREERKSIGAERTF-HPLGNQDAILCKLEEVAAELESDMTSGGWTGKTVTLKFKLDT 361 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + + + + ++ + A + + + G+ + Sbjct: 362 YQV------FTRAKSFDRWVSTKKEDLYAVKLLMPEM---PLTLRLIGLRVTKLKD 408 >UniRef50_B9WGP7 DNA repair protein, putative (Deoxycytidyl transferase, putative) n=3 Tax=Candida RepID=B9WGP7_CANDC Length = 1119 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 68/387 (17%), Positives = 131/387 (33%), Gaps = 41/387 (10%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + RPDL +P+ V + + N A+ GVK G + + Sbjct: 397 VIMHIDFDCFFATASCLKRPDLDMNKQPIAVSHGGKTSDIASCNYVARKHGVKNGMWFIQ 456 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCR- 114 L ++ +E Y S + L + + SIDE D T + Sbjct: 457 ATKLCP--DLILLPYEFESYEKFSTEFYNYLFTSKFFDSIFPVSIDEVLVDATSYCHSGV 514 Query: 115 -----DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + + IR V + T+ V +G + LAKLA AK + Sbjct: 515 GDSVSLVNELATRIRKDVFRLTNCPVSIGASTNVLLAKLALKKAKPNGQFYLF------- 567 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT----VLDLADTDIRFIRKHFN-VVLER 224 + K + ++ + D+ G GR I +KLD+ +++ + D+ + + + + Sbjct: 568 DDTEKFLQSIYIKDLPGFGRGILEKLDSE-VQSSKPRIKDVISIPKQRLVQLLGEKTGTK 626 Query: 225 TVRELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 RG +E E ++ + +FG R + + + + ++L Sbjct: 627 LFEYARGIDQTSIEIDANNPEAVLGRKSVSVDVNFGIRFDTVEELDEFLMRLSRELYQRL 686 Query: 279 RSEHQYCRFISTFI-KTS--------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 S ++ + K + F + S KL PT D I N Sbjct: 687 VSLGICGSSLTLKLAKRAEGARVNPPKFLGMGLCDFVNKSSKLGVPTNDWGIIGNEVKVL 746 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + + + + Sbjct: 747 YRMVNIPVKELRGIAITISKLVDAESV 773 >UniRef50_D0L509 DNA-directed DNA polymerase n=2 Tax=Corynebacterineae RepID=D0L509_GORB4 Length = 371 Score = 286 bits (734), Expect = 8e-76, Method: Composition-based stats. Identities = 90/369 (24%), Positives = 138/369 (37%), Gaps = 25/369 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-----CVIARNAEAKALGVKMGDPWFK 57 D++ F S E + P+L PV+V N D V + EA+ +GV G P Sbjct: 13 LHVDLDQFQVSVERLRSPELVDVPVIVGGNGDPTEARKVVTCASYEARDVGVHAGMPLRA 72 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL----TGVRNC 113 V + Y S VM L VE++ DEA+ + + + Sbjct: 73 AYRKLPDA--VYLPLDMGAYDAASAEVMDVLRAHGHPVEVWGWDEAYLGVGPAGSEIAAP 130 Query: 114 RDL--TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK--KWQRQTGGV-VDLSN 168 D TD +R + R LT VGI+ K AK+A AK TGG V L + Sbjct: 131 DDAAITDLAIRLREDIRARCGLTSCVGISDNKQRAKMATGFAKRPPEPDPTGGSKVFLLD 190 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVR 227 LM P D+W +G + + KL GI+TV DL + F Sbjct: 191 GRNWLDLMGDRPTRDLWSVGPKTAAKLSGAGIETVRDLIAAPRDDLIAIFGPHQGNWLYV 250 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 RG + + SR+F + + D+ R A+ S +++ E + Sbjct: 251 LCRGGGDATITAEPWLARSHSKSRTFPQDLVDFDEKRSAVGSLLRELLDQVIVEERLPFR 310 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 ++ ++T+ F Y + S KL PT + T L + A + GV L Sbjct: 311 VAVTVRTATF------YTRTKSRKLREPTTSFDVLEPEVTGLLAK-FDADRPVRLLGVRL 363 Query: 348 GDFFSQGVA 356 D ++ Sbjct: 364 -DLVTEEEQ 371 >UniRef50_A8EUX3 DNA polymerase IV n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EUX3_ARCB4 Length = 421 Score = 285 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 82/438 (18%), Positives = 151/438 (34%), Gaps = 66/438 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 MF D++ F+ S E L PV V + Sbjct: 1 MFIHLDIDCFFVSAERTLNKSLLDIPVAVGGRSSNDIFSSKKVQRTIATNRAAFSSKILS 60 Query: 34 ------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 G + + EA+ GVK + L + ++ NY Sbjct: 61 NDTHKSFKEYFIDENGRIRGIITTCSYEARKFGVKTAMSVNEALRLCPKLKMI--PPNYS 118 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTV 135 LY ++SN++ LE+ P +E YSIDE FCD++G ++ +F ++ +L L + Sbjct: 119 LYDELSNKLKDLLEKEVPLIEQYSIDEFFCDVSGYIKEDEILEFAHFLKKKILDELDLPI 178 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +GIA TK L+KL AK + + + + +P+++ GIG+ + +KL Sbjct: 179 SIGIASTKYLSKLMTEYAKPNGIKY------VSSQDMPEFTKDIPIENFSGIGKALCEKL 232 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 I T+ D+ + + + + G +L ++ + RSF Sbjct: 233 KGYNINTLGDIRK--NQKLFYSWQKSGIDLYNRVCGIRDNKL-TIQRERKSLGIGRSFDV 289 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 + D +R+ + + + ++ E S I+ Y + Sbjct: 290 -VFDRNEVRRRVMILSRYLSFIIKKEKVNPLSYSILIRYEYGIKVRDYINVNRLF----- 343 Query: 316 TQDSRDIINAATRSLDAI-WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 + D + + + H + + + +F NLFD + L Sbjct: 344 --NEVDFKAEMIKLFEVVDSHKTHGVIQLYITVFNFAKSNDFTANLFD-YEEEIKKQALT 400 Query: 375 TVMDTLNAKEGRGTLYFA 392 M L K G + A Sbjct: 401 NQMQKLRLKYGVDIVKSA 418 >UniRef50_D2BP58 ImpB/MucB/SamB family protein n=7 Tax=Firmicutes RepID=D2BP58_LACLK Length = 488 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 90/464 (19%), Positives = 159/464 (34%), Gaps = 69/464 (14%) Query: 2 FALCDVNAFYASCETV-FRPDLWGKPVVVLS---NNDGCVIARNAEAKA-LGVKMGDPWF 56 DV + YAS E V + + V+S N G +A + K G+K Sbjct: 20 ILFEDVKSNYASIECVQRNLNPLTTSLCVMSRADNTKGLTLASSPTFKKVFGMKN---IS 76 Query: 57 KQKDLF--------------------------RRCGVV-----------CFSSNYELYAD 79 + DL V +LY D Sbjct: 77 RASDLPFIIETRKFNFPQWYRTHTDIYGQRTEPTLQYVAFVESWAKRTWLVPPQMQLYVD 136 Query: 80 MSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVR---------NCRDLTDFGREIRATVL 128 +V L + + YSIDE+F D+T + +++ +L Sbjct: 137 YKIKVTEILTNYTSIEEIHSYSIDESFLDITESLNFFYPDIRNRYEQMNLIALDLQREIL 196 Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP-VDDVWGI 187 + L V VG+ LAKLA K + L E + LP + D WGI Sbjct: 197 DKLGLYVTVGMGDNPLLAKLAMDNYAKHNQNMRA---LIRYEDVPSKLWTLPKMTDFWGI 253 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE-FAPTKQE 246 G+R K+L+ +GI ++ +LA+ D +++ + + G + E + P Sbjct: 254 GKRTEKRLNKLGISSIKELANADPLLLKQKLGTIGLQHFFHANGIDESNVREKYIPKSSS 313 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 S+ + I A A +LR + +S ++ + + + Sbjct: 314 FSNSQILPRDYHKQKEIELVIKEMAENLAIRLRKGGKMASNLSLYVGAA---ASSEHSSI 370 Query: 307 SASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF---DD 363 S + TQ+++++ + A R +Q G ++ G+ V QL+LF ++ Sbjct: 371 KISRNI-EATQNTKELQDLAIRLFREKYQ-GGAVRQIGISGNQLSDNSVKQLSLFETVEE 428 Query: 364 NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 N E L +D + K ++ A + + R L Sbjct: 429 NQSNEKQESLQKAIDEIREKFDFLSIQKASSLSEGSRVIYRNKL 472 >UniRef50_Q6C2B9 YALI0F09141p n=1 Tax=Yarrowia lipolytica RepID=Q6C2B9_YARLI Length = 1219 Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats. Identities = 73/375 (19%), Positives = 134/375 (35%), Gaps = 30/375 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQ 58 + D ++F+ + T+ RPDL KPV V S + + N EA+ GVK G + Sbjct: 518 IIMHLDFDSFFVAVSTLDRPDLTRKPVAVGSGGSRNADIASCNYEARKYGVKNGMWMSRA 577 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS-PRVEIYSIDEAFCD--------LTG 109 L + N+ Y ++S + L E + S+DEA D T Sbjct: 578 LKLCP--DLQTVDYNFPKYEEVSEAFYTILRESQLDYIRPVSVDEALVDATTLIEANATE 635 Query: 110 VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + I V T + VG ++ LAKLA AK GV + + Sbjct: 636 CSLSEAAETVAKAIATKVRATTGCNISVGCSRNILLAKLALREAKPN-----GVHVMFDQ 690 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTD--IRFIRKHFN-VVLERT 225 + +L+ + ++ GIGR I+ ++ + + + T LA I + + Sbjct: 691 KAISQLLDKTKISEIPGIGRSIAGQIREKLHVSTAGKLARLKDVIPNMSALLGPKRGPQI 750 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 V G+ Q+ ++ I S+G R + + + +A A ++ Sbjct: 751 VDFCLGKDDSQI-AVQDERKSISVEISYGVRFENKKQFDGFVFNMSAELASRMEEISVEG 809 Query: 286 RFISTFI-------KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH 338 ++ + +T + + + SV L + +I AA A+ Sbjct: 810 SQLTCKLYVRKNEHETPKYMGHGQCDIYNKSVSLGCSVSSTSEINLAARGQFAAMGYDPV 869 Query: 339 RYQKAGVMLGDFFSQ 353 + G+ + Sbjct: 870 LVRGVGIQITKLTRD 884 >UniRef50_A9KJA2 UMUC domain protein DNA-repair protein n=25 Tax=Bacteria RepID=A9KJA2_CLOPH Length = 507 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 81/496 (16%), Positives = 150/496 (30%), Gaps = 92/496 (18%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E + R D +VV + +A + KA G+ F+ Sbjct: 6 YISIDLKSFYASVECIERGLDPLTTNLVVADASRTEKTICLAVSPSLKAYGISGRARLFE 65 Query: 58 QKDLFRR-------------------------------CGVVCFSSNYELYADMSNRVMS 86 + Y + S R+ + Sbjct: 66 VVQKVEEVNAVRLHKAPGRAFSGDSFIDTDLKSSPSISLNYIVAPPRMAYYIEYSTRIYN 125 Query: 87 TLEEL--SPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQT 142 + S + +YSIDE F D T N + + ++ VL+ T +T GI Sbjct: 126 IYLKYIASEDIHVYSIDEVFIDATDYLNTYNLSARELATKMILDVLKTTGITATAGIGTN 185 Query: 143 KTLAKLANHAAKKWQRQTGG---VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 L+K+A K + +L + +R L S P+ D W +G+ +KKL+ G Sbjct: 186 LYLSKIAMDIQAKHIPDDNNGMRIAELDEMSYRRALWSHQPLTDFWRVGKGYTKKLEEQG 245 Query: 200 IKTVLDLADTD---------IRFIRKHFNVVLERTVRELRG-EPCL--QLEEFAPTKQEI 247 + T+ D+A + K F + E + G EPC ++ + P+ I Sbjct: 246 LFTMGDIARCSLGKPTDYYNEDLLYKLFGINAELLIDHAWGWEPCTIADIKAYKPSTNSI 305 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS------------ 295 + + + + + L + + + Sbjct: 306 GSGQVL-QCAYTFDKTKLIVREMTDLLVLDLVDKRLVTDQLVLTVGYDIENMTNLKIKKS 364 Query: 296 -------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 S L T ++ I++A T + I ++ + Sbjct: 365 YHGAITTDHYGRTVPKSAHGSANLGRQTSSTKLILDAVTELFERIVDKNLLVRRVNITAN 424 Query: 349 DFFS-------QGVAQLNLF-----------DDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 QLNLF D+ A +++ M + K G+ + Sbjct: 425 HVIDETTVQKTDSFEQLNLFTDYVTENVKKEDEEAELVREKRVQKAMLDIKKKYGKNAIL 484 Query: 391 FAGQGIQQQWQMKRAM 406 + + R Sbjct: 485 KGMNLEEGATTVDRNK 500 >UniRef50_C3DVJ9 DNA-damage repair protein n=5 Tax=Bacillus RepID=C3DVJ9_BACTS Length = 393 Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats. Identities = 76/412 (18%), Positives = 145/412 (35%), Gaps = 63/412 (15%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D+ +F+AS V LG Sbjct: 33 IFCLDLVSFFASVSCV----------------------------KLG------------- 51 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLTGVRNCR--DLT 117 + + Y SN + + + P YSIDE F + + + Sbjct: 52 --------YDPQMDTYIRCSNYIAKIILQYVPPEYYFQYSIDECFIQVDNIFSLFADSPR 103 Query: 118 DFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 DF +++ + ++T ++ VGI + +AK+A + K + + + K+ Sbjct: 104 DFALKLQQEIYRKTKGISAAVGIGKNMIMAKVALDISAKNSPDL--IAEWDYNDVPTKIW 161 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 S P+ WGI + KL+ GI T+ DLA +++++K F V+ G + Sbjct: 162 SIRPLSSFWGISAKTEAKLNRKGIHTIGDLAHYPLKYLQKEFGVIGTDLHLHSHGIDFSR 221 Query: 237 L-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + + P I S+ + + ++R +H+ R + + S Sbjct: 222 ITDTYKPKSTSIGKSQILMRD-YKIEEIPVILLEQIEEVCYRMRMKHKLARTVQFSVGYS 280 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 G SV PT + DI + + L + G + + L + ++GV Sbjct: 281 R----SYGGGFRKSVTFERPTCMTMDIYHICLKYLMEL-HTGEPIRSISISLTNLVNEGV 335 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 Q+++FDD R +L +D + + G+ ++ A Q R L Sbjct: 336 EQISIFDDIKKREQQIKLTRALDEIRTRFGKNSILRAVSYTPQSTVRYRNTL 387 >UniRef50_C8PJM6 DNA polymerase IV n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PJM6_9PROT Length = 385 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 81/406 (19%), Positives = 147/406 (36%), Gaps = 34/406 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-----------GCVIARNAEAKALGV 49 M A D+++F+ S + P L GK + V+ D +++ + EA+A GV Sbjct: 1 MIAHIDLDSFFVSVARLADPVLVGKKIAVVGGGDEEIFGGKSELGSVILSASYEARADGV 60 Query: 50 KMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG 109 P L + ++ + + Y S + L +P +E +SIDE F +L G Sbjct: 61 HSAQPVKIALGLCPQ--LILVRARHGEYRKASREIYEFLLSFTPEIEKFSIDEFFLNLRG 118 Query: 110 VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 D F +++ +++R L VG+++ K +AKLA K + + ++ Sbjct: 119 TPYDADALGFAAFLQSEIMRRFSLPCSVGLSEAKLIAKLATSLTKPFGVRQILKSQIARE 178 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 +S++PV GIG+ K L GI + D R I + + L Sbjct: 179 ------LSSVPVAKFPGIGKAAQKTLGKYGIVSFGD--ALGHREIFEKMGANGRKIFAAL 230 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 GE ++ ++ I RSF D +R+ I A A ++ + Sbjct: 231 SGEDEGRVVSKR-ERKSIGFGRSFA-PCADRDELRRKILILARHLAGEVLARGLKPATYD 288 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI-WQAGHRYQKAGVMLG 348 I+ + L + A + G + + L Sbjct: 289 LKIRYKSREEFSHQISQDRAFSLS-------LLSETALELFKLCDVKKGAQIIHVALNLS 341 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 +F + + L LF + + L + + K G L A + Sbjct: 342 NFSGKSGSSL-LFCEIDK--KQQSLDRSLSRIWEKFGIEKLKKASE 384 >UniRef50_A6QA22 DNA polymerase IV n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA22_SULNB Length = 422 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 161/444 (36%), Gaps = 71/444 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 MF D+++F+AS E L G P+ V S + Sbjct: 1 MFLHIDIDSFFASAERTVDSSLKGIPMAVGSRSNLEIFNRKRTNIRLMNDNSGAFVTPVF 60 Query: 34 ----------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 G + + EA+A GVK P + L + +V Sbjct: 61 YSDREKTFDSYFVDRVEGKEKIRGIITTASYEARAYGVKTAMPIAQALQLCPQ--MVVVP 118 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 SNY Y S+++ + + + P+VE +SIDE F D++G ++ F +E++A +++R Sbjct: 119 SNYPRYHRFSHQIHAFMMKEMPKVEQFSIDEFFADVSGWIEDENVYAFAQELKAKMIERF 178 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 + V +GI++ K +AKLA +AK + ++ + +P+ GIGR Sbjct: 179 DIPVSIGISKAKWIAKLATESAKPFGVY--------EVKDIDAYIEDMPIKAFPGIGRGF 230 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 K+L+ IKT+ D+ + + + + + G C + E ++ I SR Sbjct: 231 QKRLEDRYIKTLGDVKR--NKSLFYSWKKPGIQLYHRVTGT-CNEGIESRGERKSIGISR 287 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 +F + D +++ I A + + + + + Sbjct: 288 TFD-PLYDPHEVKRRIMIMARHITYMVMAIEVNPTTFYLKVNYEYGIRAKKSETVNRLF- 345 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 + + + + + G K + + +F L+L D + Sbjct: 346 ------SEQLFKSELSTMFEEVMLPGKGAVKLTLNVSNFTMHHARTLSLLD-LNDDISAH 398 Query: 372 QLMTVMDTLNAKEGRGTLYFAGQG 395 L + +L + G + A + Sbjct: 399 ALTCHIHSLREQFGLDIVKTADEL 422 >UniRef50_A5EBX2 DNA polymerase IV (Pol IV 3) n=2 Tax=Bradyrhizobiaceae RepID=A5EBX2_BRASB Length = 330 Score = 281 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 77/365 (21%), Positives = 128/365 (35%), Gaps = 70/365 (19%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P L GKPV V + G V A + EA+A Sbjct: 28 IIHIDMDAFYASVEQRDNPGLRGKPVAVGGSKERGVVAAASYEARA-------------- 73 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD---LT 117 + + A +T RN +D T Sbjct: 74 -------------------------------------FGVRSAMRSVTAKRNMQDIPVAT 96 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D IRA +L+ T LT GI+ K LAKLA+ K + + + + Sbjct: 97 DIATAIRAKILRETGLTASAGISYNKFLAKLASDHRKPNGQF------VITPKMGPAFVE 150 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV GIG + K++ +GI T +D+ + F+ HF RG + Sbjct: 151 QLPVGKFHGIGPATNAKMNRLGIFTGMDMRNQTRGFMNAHFGKAGAYYYWVSRGVDERPV 210 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F +T + ++ + + S + R ++ +K S F Sbjct: 211 RANR-IRKSVGAENTFSGDLTGFAALVAELEPLIDKVWGHCESTGNFGRTVTLKVKFSDF 269 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF--SQGV 355 + + S + +P +D+ L+ + GV L ++G Sbjct: 270 QI------ITRSRSVASPISSRQDLNRLTLGLLECEMPIPKSVRLLGVSLSSLQAEAEGE 323 Query: 356 AQLNL 360 QL+L Sbjct: 324 PQLDL 328 >UniRef50_Q5QZ82 DinP n=2 Tax=Idiomarina RepID=Q5QZ82_IDILO Length = 356 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 72/370 (19%), Positives = 139/370 (37%), Gaps = 35/370 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCV-IARNAEAKALGVKMGDPWFKQKD 60 AL D++AF+AS E + P L +P V + V N A+ GVK P + Sbjct: 8 IALLDLDAFFASAEELRDPSLKTRPFAVGGGGERGVVATANYLARQFGVKSAMPGSHARR 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + + Y ++S++V+ L EL+PR+E SIDE + DLT + + Sbjct: 68 LCPQ--LTFIRPDGNYYRELSDKVLDILRELTPRIEPASIDEFYLDLTHLEGFKGSATLA 125 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + ++ +T GI+ K +AK+A+ K + + ++AL Sbjct: 126 MDFVREQIKTLGITGSAGISNQKMVAKIASEERKPDGQF------VVRPAEVMDYIAALN 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 + + G+G + + L G+ T D+ + +++ ++ G ++ Sbjct: 180 LKQIPGVGPKSQQVLTNYGLTTGKDIQNIELQQLQAILGDKAGYVLFERCHGRDRREVVT 239 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC-------RFISTFI 292 ++ + ++ + + + + KLR + R + + Sbjct: 240 ER-IRKSVGVEQTLATDMRLESTAQAYVQ---DNLLPKLRQRMKITHWREQPIRSQTLKL 295 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA--GHRYQKAGVMLGDF 350 K S F S S + ++P+ + LD WQ G + G+ Sbjct: 296 KFSDFT----QTTVSRSAQFISPS--------LFYQLLDEAWQRGKGKGVRLLGISATLP 343 Query: 351 FSQGVAQLNL 360 QL L Sbjct: 344 DPNEQLQLEL 353 >UniRef50_A3ZXX8 ImpB/MucB/SamB family protein n=2 Tax=Planctomycetaceae RepID=A3ZXX8_9PLAN Length = 407 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 79/394 (20%), Positives = 153/394 (38%), Gaps = 27/394 (6%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFR 63 D+N+++AS E RP+L +PV V+ + C+IA + +AK GVK+G + + L Sbjct: 10 DMNSYFASVEQQLRPELRKQPVGVVPLDTDSTCIIAASYDAKRSGVKVGTKVYDARRLCP 69 Query: 64 RCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTDFGRE 122 ++ + ++Y M +R+++++E+ +P IYSIDE L G R Sbjct: 70 GIQLI--KARPDVYVRMHHRLLASVEKCAPIERIYSIDEWTIRLLGADRQLEQARRLAYR 127 Query: 123 IRATVLQRTHL--TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 I+ V L + +GIA T+ LAK+A K + E + + LP Sbjct: 128 IKRHVAHEIGLWMSCSIGIAATRLLAKIAAGLEKPHG------LTALPQEALPERIEHLP 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 + + G+ I ++L G+ + +L + + + + + + R L G E Sbjct: 182 LTKLNGVNVGIERRLHQHGVTNIRELWNLNRDEMTRAWGSISGSRWWAGLHGVDE---PE 238 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q + + + + A++LR Y + +K Sbjct: 239 PPTRRQSMSHGNVLDPQFRTADGAHCILVKLICKLAQRLRRSGYYANVLQLSLKDVRGGR 298 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 E + + QD+ ++ + + + K V + D + Sbjct: 299 FE-------TKTPIPCLQDTPSLLLQFEKLWKSRPLSNTPLLKVDVCVSDLRLASQVTRS 351 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 LF++ L V+D + + G L+F Sbjct: 352 LFEELEQPCK---LSAVLDEITDRWGPSALFFGS 382 >UniRef50_Q0FDK2 UMUC-like DNA-repair protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FDK2_9RHOB Length = 401 Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 162/411 (39%), Gaps = 27/411 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQKD 60 D+N+F+AS E P L GKPV + + GC++A + EAK GVK + K Sbjct: 7 IYIDMNSFFASVEQHEEPYLRGKPVGITAMEGDVGCLVAASYEAKYFGVKTTMSIKEAKI 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L + ++ S + LY + R+ ++ + + S+DE L G + + + Sbjct: 67 LCPK--IILRPSRHRLYVRYNQRIARIFDQYAELEYVRSVDEFQIALGGTTSNLNVASKL 124 Query: 120 GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + ++ + L GI LAK+A K Q + + + +S Sbjct: 125 VKTMKDALKYEIGENLKFSAGIGSNHLLAKIAGKLEKPDGMQ------WLSPDNMPQRLS 178 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 +P+ D+ GIGR + KL++ GI + + D R RK + ++ ER +R L+GE Sbjct: 179 NIPLGDLPGIGRGVLFKLNSAGIHNCEQMYNLDPRHARKIWGSIIGERFIRLLQGED--- 235 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + S+ + ++ +LR ++ S F++ Sbjct: 236 IPLETTKRGGYGNSKMLAPENRTLKNAYLVSRWLIEKSVARLRRDNYTASQFSLFLR--- 292 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRY--QKAGVMLGDFFSQG 354 + P SVK +QD+ ++ R ++ H Y V LG+ Sbjct: 293 --IQNPRNRWGHSVK-THYSQDTAHFLDINRRLWRMMYSQKHPYLISSISVHLGNILPLN 349 Query: 355 VAQLNLF--DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 + + A + E+L +DT+N + G T+ + + + Sbjct: 350 KRSGEMLLPMEMAKKNDRERLSRTLDTINKRFGASTITYGINKAHNGFFER 400 >UniRef50_A9UXX3 Predicted protein (Fragment) n=2 Tax=Eukaryota RepID=A9UXX3_MONBE Length = 456 Score = 280 bits (716), Expect = 9e-74, Method: Composition-based stats. Identities = 68/382 (17%), Positives = 124/382 (32%), Gaps = 67/382 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + CD +AFYA+ E +P L GKP+ G + + EA+ GV+ P + Sbjct: 90 VIVHCDADAFYAAVELRDQPHLRGKPI--GIGGIGMLSTASYEARKFGVRSAMPGYIALR 147 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ + Y S ++ + + + P S+DEA+ D+T D Sbjct: 148 LCPE--LILVKPRFHAYEAASRQLQAVMAQYDPNFRSVSLDEAYLDITDYMARLTPGDVA 205 Query: 121 R-------------------------------------------------EIRATVLQRT 131 + ++R + + T Sbjct: 206 QLPPLTTVADPPLVQEANSADSKPGMATDSAGARNLTTLEGRALAARVVHQMRTRMHETT 265 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 LTV GIA + LAK+ + K + ++ ++ +P + GIG+ Sbjct: 266 QLTVSAGIACNRMLAKIGSDQNKPDGQF----CLPADRAAILAFLANMPTRKIPGIGKVT 321 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 + L + I L ++ F + + +R G ++ I Sbjct: 322 EQILRELDITNCQALLQQ-RALLKLLFTPISFDFFMRSALGIASNN-TRKRSERKSIGHE 379 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 +F + P + + A + + R + +KT F + + SV Sbjct: 380 TTF-RELNQVPDLEDKCLHLCHKTALDMERKALLGRSVCLKLKTVDFKVKQ------RSV 432 Query: 311 KLLTPTQDSRDIINAATRSLDA 332 L T D I AA L Sbjct: 433 LLPAHTADEPVIKRAALGLLHR 454 >UniRef50_UPI0000DB76DA PREDICTED: similar to Rev1 CG12189-PA n=1 Tax=Apis mellifera RepID=UPI0000DB76DA Length = 844 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 112/369 (30%), Gaps = 74/369 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-------GCVIARNAEAKALGVKMGD 53 + D++ F+ S +P+L G PV V + + + EA+ GVK G Sbjct: 226 VIMHIDMDCFFVSVGLRDKPELKGLPVAVTHAKGNKNSCSLSEIASCSYEARKAGVKNGM 285 Query: 54 PWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC 113 + + + N+E Y +S + T+ + +E S DE + D T + Sbjct: 286 FLGEALKICPDLRTI--PYNFEGYTKVSYILYDTVASYTLDIEAVSCDEMYADCTKILEE 343 Query: 114 RD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 +F IR + ++T V G + K LA+LA AK + E Sbjct: 344 SGLTPMEFATIIRQEIKEKTGCPVSTGFGRNKLLARLATRKAKPNGQFY------IQQEH 397 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 +S+ V D+ D + ++ I Sbjct: 398 INNCISSFNVQDLP-------------------DNSKLNLEHI----------------- 421 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 ++ + ++G R + + +L + R I+ Sbjct: 422 ------------RKSVSAEVNYGIRFESNEDAIDFLKKLSHEVYNRLNKANAKGRCITLK 469 Query: 292 I---------KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 + +T F + + S + P D I + + + + Sbjct: 470 VLIRAKEAPKETEKFMGHGLCDYVTKSKNFIAPINDVDIITKEVIILWNQMQKIPEDARG 529 Query: 343 AGVMLGDFF 351 G+ + Sbjct: 530 IGIQISRLE 538 >UniRef50_C9KLN2 UV-damage repair protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLN2_9FIRM Length = 499 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 84/487 (17%), Positives = 148/487 (30%), Gaps = 84/487 (17%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 F D+ +FYAS E V R D +VV + +A K+ GV F+ Sbjct: 6 FIAIDLKSFYASVECVERGLDPLTTNLVVADESRTEKTICLAATPAIKSYGVPGRARLFE 65 Query: 58 QKDLFRRC-------------------------------GVVCFSSNYELYADMSNRVMS 86 + + Y D S R+ Sbjct: 66 VIQKVKAANSMRRFYAPGRKLTGTSHDATELANNPNLAIDYIVAPPRMAFYMDYSARIYK 125 Query: 87 TLEELS--PRVEIYSIDEAFCDLTGVRNCRDLT--DFGREIRATVLQRTHLTVGVGIAQT 142 + YSIDE F + ++T D G ++ VL+ T +T GI Sbjct: 126 VYLRYIAPQDIHTYSIDEVFINAAPYLGTYEMTAHDLGMKLMREVLKETDITATAGIGTN 185 Query: 143 KTLAKLANHAAKKW-QRQTGGVVD--LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 LAK+A K GV L + +RKL + P+ D W +G+ ++KL MG Sbjct: 186 LYLAKIAMDIVAKHMPPDPDGVRIAALDEISYRRKLWAHTPLTDFWRVGKGYAEKLANMG 245 Query: 200 IKTVLDLADTDIR-----FIRKHFNVVLERTVRELRGEPCLQLE---EFAPTKQEIICSR 251 + ++ D+A + + + F V E + G +E + P + + Sbjct: 246 LYSMGDIARRSLDAQGEKELYRVFGVNAELLIDHAWGYEPCTMEAIKAYRPASTSVSSGQ 305 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS--------------PF 297 T+ R + A + L ++ I I Sbjct: 306 VLHCPYTN-EQARLIVWEMADQMILDLVAKKLMTSQIVLDIGYDIENIAKGYTGPVHIDH 364 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV-- 355 +V L + ++ +++ D I ++ + +G + Sbjct: 365 YGRRVPKPAHGTVSLKKHSSSTKQLLHETLALYDRIVSPTLMVRRITITMGKLIDEDSAT 424 Query: 356 ------AQLNLFDDNAP-----------RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 Q +LF D + L M + K G+ + A ++ Sbjct: 425 KKNEDIVQFDLFSDTEKEAKESEAAEHAEQKEKSLQHAMIAIKNKFGKNAILKATNLKEE 484 Query: 399 QWQMKRA 405 + R Sbjct: 485 ARTIARN 491 >UniRef50_B7GAF1 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GAF1_PHATR Length = 1125 Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats. Identities = 74/426 (17%), Positives = 140/426 (32%), Gaps = 69/426 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN------------------DGCVIARNAE 43 D++ F+AS P+ KPV + N N E Sbjct: 450 VMHVDMDCFFASVVLRKFPEYRDKPVAISHNGQSDDSSRTNGVLQVSKDSTSECATCNYE 509 Query: 44 AKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTL----EELSPRVEIYS 99 A+ G+K G + K L +V +++ Y +++ +V L VE S Sbjct: 510 ARKYGIKKGMYLGRAKILCPE--LVVLQYDFDGYEEVAEQVTDILFEHASRFDGTVEQVS 567 Query: 100 IDEAFCDL-----TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 DE++ +L V IR + + T T VG+++ K LAKLA K Sbjct: 568 CDESYIELFLSDDPTVTAQEQAASLAEMIRQQIWEATQCTATVGVSKNKLLAKLATDKVK 627 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT---DI 211 + E R+L+ L + + GIG R +KL + T+ D+ + Sbjct: 628 PNRSHLV--------ESHRELLQDLELRCLHGIGYRTDRKLAGEELVTIQDVWNLGDHAE 679 Query: 212 RFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSR----------------SFG 254 + + + ++ GE ++ A ++ I ++G Sbjct: 680 SELSRILGPGLGKKIFGFCNGEDDRPVQ--AAERKTIGAENRYSLVCSTYPFFVYKCNYG 737 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK--------TSPFALNEPYYGN 306 R + I A ++++ + ++ IK F + + Sbjct: 738 VRFDGPYGVDYMIDGLAKEVSKRMENVGTKGIRVTLKIKQKKAAAPPPPKFLGHGSCHNL 797 Query: 307 SASV--KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 S S+ + PT++ +I + + + G++L L + D N Sbjct: 798 SKSIDTRNSVPTREWAEISHLCQAMFVELQVDLEDVRGMGIVLSKLTPDMGTALKMPDSN 857 Query: 365 APRPGS 370 Sbjct: 858 QCMRKW 863 >UniRef50_A6DEG1 DNA-directed DNA polymerase n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DEG1_9PROT Length = 404 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 79/428 (18%), Positives = 156/428 (36%), Gaps = 60/428 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVV------------------------------- 29 M D++AF+ S L GKP VV Sbjct: 1 MKIHLDLDAFFVSAHRTKDKSLIGKPAVVVKTHDKEIFELKKTKVLNLNKGAFTGDIIVT 60 Query: 30 ---LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 L N G ++ + EA+ G+K G + K ++ + +Y LY +S ++ Sbjct: 61 NQELEENRGIIVTASYEAREFGIKTGMTLLEAKKIYP--NLTVIKPDYHLYHLLSYKLKL 118 Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 L + P +E +SIDE F DL G + +++ F ++ + + L + +GIA++K A Sbjct: 119 FLRKKIPLIEQFSIDEFFGDLEGWVDEKNVLKFCYNLKQEIYDKFSLPISIGIAKSKWSA 178 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 KLA AK + ++ + + + + GIG+RI ++L + GI T+ DL Sbjct: 179 KLATSFAKPNG--------VFKVDDVYEFIKNIDIAKFPGIGKRIERRLKSRGILTLGDL 230 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + + + + + + GE ++ E ++ + SR F I D + + Sbjct: 231 VKNKEYIL--SWGKMGDVLYKRVIGEDNEEVFE-REDRKSVGISRRFDV-IYDREEIMRR 286 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 I A + + F I+ ++ + + + Sbjct: 287 IKILCRFLAFLVTKKKLNPTFYYLKIRYKNGQKSKAHLKVERIF-------NELLLKEIM 339 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 + + + +++ F NLFD +E+L ++ + K G Sbjct: 340 SFLFLRVDEYDDGIVSISLVVSRFKRVS----NLFD-YEKDIKNEKLNKAINKIREKYGV 394 Query: 387 GTLYFAGQ 394 + + Sbjct: 395 DIMVSGDE 402 >UniRef50_D2JWS9 Putative DNA-directed polymerase kappa n=1 Tax=Filobasidiella depauperata RepID=D2JWS9_9TREE Length = 570 Score = 278 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 66/347 (19%), Positives = 122/347 (35%), Gaps = 55/347 (15%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E P L K V G + + EA+ GV+ G F K L Sbjct: 101 IIHVDMDAFYASVEVQRDPSLKNKAFGVG---RGVLTTASYEARKFGVRSGMAGFIAKKL 157 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 ++ ++++LY S V LE+ + + S+DE + + Sbjct: 158 CP--NIILTDTHFDLYIAASKSVREILEQYDENLMMASLDEGYL---------------K 200 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKL---ANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +R V + T++T+ GIA + LAK+ + K + + + M Sbjct: 201 HLRNQVEKETNMTISAGIAPNRMLAKMGKICSDKNKPNGQYEMNF----ERSKIVRFMRD 256 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G GR + L+++G+K+ D+ D + + + R G + Sbjct: 257 LPVRKIPGFGRVTERYLESLGVKSCGDIYDKRAELLVMNHWLGFRGLCRTYLGIADNNVT 316 Query: 239 EF-APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + R+F + D + + S L + +S F+ Sbjct: 317 PRKREERKSVGVERTFRNKTND-EDIMNTLSSIVDELERDLERLRTRAKSVSKFV----- 370 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 ++DI+ A L + + G Sbjct: 371 -------------------SSAKDILPIAQDLLQR--ELPLCIRLLG 396 >UniRef50_B6K5D4 DNA polymerase IV n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K5D4_SCHJY Length = 1006 Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats. Identities = 75/367 (20%), Positives = 127/367 (34%), Gaps = 23/367 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNND-GCVIARNAEAKALGVKMGDPWFKQKDL 61 D + F+AS T RP+L G+PV V + + N A+ GVK G + Sbjct: 342 FHVDFDCFFASVLTRDRPELQGRPVAVAHGTKNSEIASCNYAARDFGVKNGMFVNTARSK 401 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-VEIYSIDEAFCDLTG-VRNCRDLTDF 119 +V +++ + ++ L + +++ S+DEA D+T N + Sbjct: 402 CPELELV--DYDFDAFESVARTFYQILSHIQHTAIKVVSVDEAVLDMTDIFTNDDEAIKT 459 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 I+ +VL++T TV VGI LA+LA AK L N + L Sbjct: 460 AESIQTSVLEQTRCTVSVGIGPNLLLARLALRKAKPRGIY------LLNEAVAGDYLKTL 513 Query: 180 PVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 V ++ G+G +KL +KTV DL + K F RG L Sbjct: 514 TVRELPGVGWAQEQKLLLRYKVKTVSDLRSISRESLMKDFGASFGAHLYSIARGHDETLL 573 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI----K 293 +E + I ++G R + + ++R H + + + K Sbjct: 574 KE-DMIRSSISVDVNWGVRFIFKQDVVDFLGRLCEELVSRMRDCHSRLQQLQLRVLKRAK 632 Query: 294 TSPFALNEPY-----YGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + F + + S PT D+ + A + G+ Sbjct: 633 HASFETLKYLGCGEVDTLTKSAFFNEPTDDTALLTKKCVVLFHACSIDAGEIRGIGLQAL 692 Query: 349 DFFSQGV 355 G Sbjct: 693 KLSDSGT 699 >UniRef50_D1J7R2 DNA-damage repair protein MucB n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7R2_MYCHP Length = 418 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 90/403 (22%), Positives = 177/403 (43%), Gaps = 25/403 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+++F+ SCE +L KPVV+ + A + E K LG ++G + Sbjct: 4 IIFHIDMDSFFVSCERSINTNLIDKPVVIAKRYKRSIISAMSYEVKNLGYRVGSSLYTVL 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLE-ELSPRVEIYSIDEAFCDLTGV-RNCRDLT 117 + ++ +Y+LY+ +S ++ L+ + ++EIYSIDE + D + N + Sbjct: 64 EKVP--NLLIVEPHYDLYSLISKKIFDYLKNKYCTQLEIYSIDECYIDFSNTVSNWEEAK 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + ++I+ +L+ + +GI+ TK LAK++ + AK + ++ E + Sbjct: 122 NLAQQIKDDILKTFMIPCSIGISFTKFLAKMSTNKAKPSG------ILITKKEDIERNFY 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR-FIRKHFNVVLERTVRELRGEPCLQ 236 +LPV+ ++G+G+ IS++L I T DL + + F+RK F + +L+G Sbjct: 176 SLPVEKIFGVGKNISQQLIKNKISTYKDLLECNNEIFLRKLFKKNFFLFIEQLKGINATD 235 Query: 237 LEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + I + +F E D ++ + A A + + + CR + I+ Sbjct: 236 HI-LNLETKGISNTITFMEKDSDDIVFLKNELFKLARNVANRAVNNNYECRCVEVLIR-- 292 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--Q 353 + S K+ T D I A + +W + G+ + D S Q Sbjct: 293 ----KQDKKWMSEQKKIDFFTNDIDIIFKIALKLFLNLWNEKECLRGLGIRICDLRSIFQ 348 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 Q++LF+DN + + ++++ +NAK L Q + Sbjct: 349 ENKQIDLFEDNNQKS---IVNSILNEVNAKFEGKILITGKQYL 388 >UniRef50_Q6BS95 DEHA2D10560p n=2 Tax=Debaryomyces hansenii RepID=Q6BS95_DEBHA Length = 1175 Score = 277 bits (710), Expect = 5e-73, Method: Composition-based stats. Identities = 73/410 (17%), Positives = 134/410 (32%), Gaps = 49/410 (11%) Query: 2 FALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQ 58 D + F+A+ + P+L P+ V + + N A+ GV+ G K Sbjct: 458 ILHVDFDCFFATASCLNHPNLDINKDPIAVTHGGRTSDIASCNYVARKFGVRNGMWSGKA 517 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCRD- 115 K L ++ +++ Y S + L + + SIDE D T Sbjct: 518 KQLCPE--LIQLDYDFDAYERCSAKFYDYLISRGIFDHIFPVSIDEVLLDATSFCLESGR 575 Query: 116 -----LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + + + IR + T+ +V VG + LAKLA AK + E Sbjct: 576 LREDIINELSQTIRKGIFSLTNCSVSVGASHNVLLAKLALKKAKPNGQFYL-------HE 628 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKT-------VLDLADTDIRFIRKHFN-VVL 222 + + + +PV D+ GIG I KL I+ + DL + F Sbjct: 629 KVDEFLDNIPVRDLPGIGNSIKYKLIEE-IQDMSSQEPLIKDLKPFTELQLMNIFGKKTG 687 Query: 223 ERTVRELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 + + RG ++ E ++ + +FG R P + + + + Sbjct: 688 TKLYQFARGIDNSSIKLDLNNSESVLGRKSVSVDVNFGIRFDTVPQVEAFLMNLSKEMYS 747 Query: 277 KLRSEHQYCRFISTFI--KTSPFALNEP-------YYGNSASVKLLTPTQDSRDIINAAT 327 +L S I+ + + ++ P S S KL PT D + + Sbjct: 748 RLISLGMCGSSITLRLAKRAHDAPIDPPKYLGMGLCDFVSKSSKLGVPTNDWGIMGSEIK 807 Query: 328 RSLDAIWQAGHRYQKAGVMLGDFFSQGV----AQLNL-FDDNAPRPGSEQ 372 + + + + Q+ L F+ E+ Sbjct: 808 ALFRMVNVPVKELRGIAITMNKLEDVENLKKIRQMRLPFNQVKRNNFHEK 857 >UniRef50_A8IYH8 Deoxycytidyl transferase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IYH8_CHLRE Length = 764 Score = 277 bits (709), Expect = 6e-73, Method: Composition-based stats. Identities = 68/369 (18%), Positives = 113/369 (30%), Gaps = 79/369 (21%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG----CVIARNAEAKALGVKMGDPWF 56 + D++ F+AS V RP+L G+P+ V +N G V + N A++ G++ Sbjct: 287 VVLHVDMDCFFASVAAVGRPELAGRPLAVCHSNSGKGTGEVSSANYVARSYGIRADMFMG 346 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + K L Y D R Sbjct: 347 EAKRLCPDLAQ----PQPHTYG---------------------------DPAEALAARLR 375 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 D T T GI +A+LA AK + G L Sbjct: 376 ADIAA--------ATGCTASAGIGPNMLVARLATRRAKPNGQFRGCHTGLV--------- 418 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCL 235 G+G + KLD MGI +V L + G+ Sbjct: 419 ---------GVGWSTADKLDKMGITSVRQLQKA--------LGAKLGSDLWAHAHGQDER 461 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT- 294 ++E ++ + ++G R T + + AA A +L++ R ++ K Sbjct: 462 RVEP-PKARKSVGAEVNYGIRFTTEEEAERFMGDLAAEVAARLKTAGVKGRSLTLKAKRR 520 Query: 295 -------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + F + S S+ L T D+ D+ A L A+ + G+ + Sbjct: 521 LAGAPEPAKFMGHGACDNISRSMTLGRFTDDAADLRREAVALLRALAVPAAELRGLGLTV 580 Query: 348 GDFFSQGVA 356 S A Sbjct: 581 SRLDSDPAA 589 >UniRef50_B3RQD9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RQD9_TRIAD Length = 1014 Score = 276 bits (708), Expect = 7e-73, Method: Composition-based stats. Identities = 51/324 (15%), Positives = 107/324 (33%), Gaps = 35/324 (10%) Query: 35 GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR 94 + + N A+ G+ G + L + ++ Y ++S + +TL + Sbjct: 396 SEIASCNYVARRYGLHNGMFMGRALQLCPH--LRVVPYEFDKYKEVSKLLYNTLASYTFE 453 Query: 95 VEIYSIDEAFCDLTGVRNC-RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAA 153 + S DEA+ D+T + + D IR + +T T GI +A++A A Sbjct: 454 IMAISCDEAYIDVTDILQDDYTIQDLASSIRHDIESKTGCTCSAGIGPNLLIARMATRIA 513 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF 213 K + + ++ + D+ G+G R+ +KL + ++T DL + Sbjct: 514 KPNGQHY------VDPANVLTFVANQSLKDLPGVGYRLHRKLKDLNVETCQDLRKISLPV 567 Query: 214 IRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAA 272 +++ F + RG ++ ++ + ++G R + Sbjct: 568 LQRDFGTKTGLMLYQYCRGIDERPVQ-VDHERKSVSAEINYGIRFAEMKH---------- 616 Query: 273 RAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 R IK + + + S L PT DS I + + Sbjct: 617 -------------RSPDASIKPWKYLGHGKCDNYAKSTTLTRPTCDSDIISKECMKLFYS 663 Query: 333 IWQAG-HRYQKAGVMLGDFFSQGV 355 + G+ + Sbjct: 664 FASINVQDVRGMGIQIQRLSPIDE 687 Score = 58.5 bits (141), Expect = 5e-07, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 16/36 (44%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC 36 + D+++F+ S R DL G PV V + Sbjct: 293 VVMHLDMDSFFVSVAIRDRADLRGLPVAVTHSKGKI 328 >UniRef50_A6X194 DNA-directed DNA polymerase n=5 Tax=Alphaproteobacteria RepID=A6X194_OCHA4 Length = 424 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 86/396 (21%), Positives = 150/396 (37%), Gaps = 29/396 (7%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVL---SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 D + F+AS E L G+P+ V+ + VIA + EAK GVK P + K Sbjct: 10 LYLDFDGFFASVEQQCDRRLRGRPIGVVPFEGTDRTAVIACSKEAKNFGVKNVMPIKEAK 69 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L ++ +LY N ++ +E + SIDE C L RD Sbjct: 70 RLCP--DLILVPQKPDLYRRAHNALLCEIETVIAIDTAKSIDELTCVLDDSGK-RDPELL 126 Query: 120 GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHA----AKKWQRQTGGVVDLSNLERQR 173 I++ + +T +G A + LAK+A A K+ G+ Sbjct: 127 AARIKSAISNNIGQFITCSIGFAANRQLAKIACKAGKEETKRRGSYGNGLAIWWPTIMPD 186 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGE 232 L+ + ++D+ G+G ++K+L G+ T L + +RK + +V ER L G Sbjct: 187 PLLR-VELEDIPGVGSNMAKRLYRNGVFTTTQLYALQPKHMRKIWNSVNGERLWYALHGY 245 Query: 233 PCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 ++ + + R + +AA +LR E+ Y + ++ Sbjct: 246 D---IQAPSQQRGMFGHGRVLPPDARSITGAYEISRLLLTKAARRLRRENFYAAGLWLWL 302 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGD 349 + +Y L D + I++A + G + GV L D Sbjct: 303 SVRDGSWFGKHY-------LPV-VNDDQAILSALRLLWQRVREDHPRGVTIFRVGVTLYD 354 Query: 350 FFSQGVAQLN-LFDDNAPRPGSEQLMTVMDTLNAKE 384 Q++ L +D+A R E+ +D +N+K Sbjct: 355 LSPADERQMDMLNNDDAERQKWEKANNAVDAINSKY 390 >UniRef50_D0A851 DNA polymerase kappa, putative n=17 Tax=Trypanosoma brucei RepID=D0A851_TRYBG Length = 572 Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats. Identities = 71/367 (19%), Positives = 132/367 (35%), Gaps = 29/367 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ E P+ P+ + + + N A+ G++ G P F + Sbjct: 135 YIHLDMDMFYAAVEIKKHPEYATIPLAIGTMTR--LQTANYIARGRGIRQGMPGFLALKI 192 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD----LT 117 ++ +++ Y + SN V + E P + +DE +++ + Sbjct: 193 CP--NLLILPPDFDAYNEESNTVRRIVAEYDPNYIVVGLDELALEVSAYIERFEGTKTAE 250 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D E+R V T LT GI T LAK+A++ K + ++L E + Sbjct: 251 DVASELRVRVFGETKLTASAGIGPTAALAKIASNINKPNGQHD---LNLHTREDVMTYVR 307 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L + V G+G+ L +GI T+ D+ + + N + + G Sbjct: 308 DLGLRSVPGVGKVTEALLKGLGITTLSDIYNRRVELCYILHNNLFRFLLGASIGIMQWPD 367 Query: 238 EEFA-----------PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 A ++ I RS M++ + + A E++R CR Sbjct: 368 AATAANTENCEGATGEQRKAISSERSITTP-RTKEGMQEMVDTVFNGAYEEMRKSEIMCR 426 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 IS I+ + + + + L+ + DS + A + GV Sbjct: 427 RISLTIRWASYRYQQY------TKSLIQHSDDSATLRRAVDELMLPHAAKYSEMCLLGVR 480 Query: 347 LGDFFSQ 353 L D S Sbjct: 481 LSDLISA 487 >UniRef50_Q2BYP9 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Photobacterium RepID=Q2BYP9_9GAMM Length = 426 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 104/432 (24%), Positives = 189/432 (43%), Gaps = 18/432 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M L D FYA ++P L P++V + G IA N + +G+ P +++ D Sbjct: 1 MICLLDGTRFYAESCITYKPALRNTPLLVTTGQ-GISIAANRASTNIGISKFTPIWEEID 59 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCR-DLT 117 R + + +N+ ++ S+R M+ LE+ R YS+DE F D++ + DL Sbjct: 60 RLRVHKGIVYKANFNTFSHHSDRFMTALEKHIQDARSMRYSVDEVFYDVSHLYRINVDLN 119 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + + +R + + T + G G+ +T TLAK+A+ AAK + G L + + ++ Sbjct: 120 EHVQALRKAIYKETGVPTGAGVGKTLTLAKVASWAAK-NCQPYQGQCVLISEKETDTVLK 178 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 +PV +W IGR+++K L GI T L D + K +++ + + EL G CL + Sbjct: 179 QMPVGKLWNIGRQLNKHLTQEGILTAYQLKQCDTKTYHKRYSINVANVISELNGIACLDI 238 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 K++I + S+ +R+ + + + A K+R + + +S F+ TS + Sbjct: 239 SVEREKKKQIWSTASYRDRLHHRDDLFAELAHHCAEVMRKIRDQKSEMKTLSVFVCTSKY 298 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG---HRYQKAGVMLGDFFSQG 354 P+Y + L D+ + D + K GV Sbjct: 299 DRCPPFYRRGE-LTLENGLTDTSFALQQLRALFDDLIPNNLAKQPIYKVGVGAPSLIDAE 357 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS----PR 410 V Q LF+ + L +D L+ + G+G + FA Q Q+ + ++ + Sbjct: 358 VKQFELFNRFD---NKDTLNNTLDQLSDRFGKGVIGFACQ--QRSYHERQGEIEMLELEN 412 Query: 411 YTTRSSDLLRVK 422 Y T D++ VK Sbjct: 413 YYTDIKDIVVVK 424 >UniRef50_C5DG10 KLTH0D01518p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DG10_LACTC Length = 994 Score = 275 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 71/397 (17%), Positives = 128/397 (32%), Gaps = 43/397 (10%) Query: 2 FALCDVNAFYASCETVF--RPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQ 58 D + F+A+ + R DL P+ V NN + + N A++ GVK G Sbjct: 359 IFHVDFDCFFATVSALSDARYDLSRDPLAVAHGNNSSEIASCNYVARSFGVKNGMWVRSA 418 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEA----FCDL---TG 109 + L ++C N+E Y S + L + SIDEA + D Sbjct: 419 RRLCP--NLICLPYNFEQYEVNSKLLYQILAGSGFFQMILPISIDEAICVKYLDGLPDGD 476 Query: 110 VRNCRDLTDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 + R+IR V T TV +G + + LA+LA AK + + Sbjct: 477 ASAHQQCEAITRQIRRDVFDATNGCTVSIGCSNSLVLARLALKKAKPNGQCVMASL---E 533 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIK------TVLDL-ADTDIRFIRKHFN-V 220 + + LP+ D+ G+G I K+ + T+ DL ++ ++ + Sbjct: 534 QDSIDAFIEELPLRDLPGVGATIVDKVQQHILFEQTAEPTIGDLKRNSSLQLLASKLGTK 593 Query: 221 VLERTVRELRGEPCLQLEEFAP------TKQEIICSRSFGERITDYPSMRQAICSYAARA 274 + L G+ + ++ I ++ R + + I Sbjct: 594 TGHKLHLFLSGKDDEENSRVLRDPLDYFARKSISVDINYAIRFDTIHEIDEFIDRICEHL 653 Query: 275 AEKLRSEHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 KL ++ + + + + S S + PT ++ I Sbjct: 654 TTKLGELDMVTPQVTLKVTRRCEHAPIEPAKYLGSGECDTFSRSSRFGVPTCEAGLISTE 713 Query: 326 ATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA--QLNL 360 S + + V L QL L Sbjct: 714 VKSSFRMLGCPPKDLRGIAVQLNKLEKVSDRVCQLRL 750 >UniRef50_C4Q7Z3 Terminal deoxycytidyl transferase rev1, putative n=1 Tax=Schistosoma mansoni RepID=C4Q7Z3_SCHMA Length = 1001 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 147/443 (33%), Gaps = 95/443 (21%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGC----------------VIARNA 42 + D++ F+ S RP+L KP+ + ++ G V + + Sbjct: 363 IIFHIDMDCFFVSVSLRNRPELEDKPIAITHAKSSRGSVNDIRSSNKHAESMSEVASCSY 422 Query: 43 EAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE 102 A+ GVK G + K L ++ ++E Y +S + ST+ + ++ S DE Sbjct: 423 TARHAGVKNGMLLGRAKQLCP--DLIVLPYDFEAYKAVSELLYSTISRFTRDIQAVSCDE 480 Query: 103 AFCDLTGVR---------------------NCRDLTDFGREIRATVLQRT-HLTVGVGIA 140 + D T + + G IR V T T +G Sbjct: 481 LYADCTELLIYSNENEIKPKLHDSNWEATYQIINPLILGGYIRELVRDITGGCTASIGFG 540 Query: 141 QTKTLAKLANHAAKKWQRQT-----GGVV-------------DLSNLERQR--------- 173 +K LA+LA AK + GG S+ E Sbjct: 541 TSKLLARLATKKAKPNGQYWLLGRSGGACPKLDRQTKNESWRWYSSDENIEQLETHSECE 600 Query: 174 ------KLMSALPVDDVWGIGRRISKK-LDAMGIKTVLDL-ADTDIRFIRKHFN-VVLER 224 + + LP+ ++ IGR ++ K A KT L + I R Sbjct: 601 LTGDEYQWLCNLPLTEIPNIGRSLAGKIFQAFDAKTCGQLMSKVSHNQITSLLGKKTGNR 660 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR----- 279 RG+ L+ F + + S ++G R++ + + S + ++R Sbjct: 661 VYMACRGKDLDSLQ-FEKEYKSVSASMNYGIRLSSRSELEALVQSLCEELSSRMRNIKMS 719 Query: 280 --SEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 +E + ++ ++TS + + + ++++ T D+ + A + Sbjct: 720 SMNEGCVGKSLTIKLYLRLPNAPVQTSKYMGHGLCSITNHTIQMTEHTADATVLYRYAVK 779 Query: 329 SLDAIWQAGHRYQKAGVMLGDFF 351 ++ + + G+ + Sbjct: 780 TVYRLCPEPEDLRGIGLQVHQLQ 802 >UniRef50_Q98R22 DNA-DAMAGE REPAIR PROTEIN MUCB n=1 Tax=Mycoplasma pulmonis RepID=Q98R22_MYCPU Length = 425 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 85/415 (20%), Positives = 174/415 (41%), Gaps = 24/415 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQK 59 + D ++++ S R DL+GK +VV N + + + EAKA G+K+G P +K K Sbjct: 13 VIFHLDADSYFVSAIRTIRKDLFGKSMVVAHNHKRAIITSASYEAKAKGIKVGMPLYKAK 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVR-NCRDLT 117 + VV ++ELY+++S+ + + L E + +++IYSIDE F D + + + Sbjct: 73 LIDP--NVVVADYSFELYSNLSSNIFNFLYENYTKKIQIYSIDEFFIDASDLVVKKGSIL 130 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +E++ ++ + +G+ +AK++ K + + ++ +K + Sbjct: 131 KLAQEMQKAIMDNFSIPFSIGVGPNLWMAKMSTSINKPYG------ITITKRSDLKKNIY 184 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLAD--TDIRFIRKHFNVVLERTVRELRGEPCL 235 + + + GIG+ KL + IKT+ D + + K + + L+ E +G Sbjct: 185 SQDISEYVGIGKSGLAKLSHLNIKTIGDFCNSVFAQGALEKIYGIKLKTIKEECQGISND 244 Query: 236 QLEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 Q++ Q + SF + + S+ +KL++ Y ++ ++ Sbjct: 245 QIDTSQNDAQSLGSEISFSHDDLDERSSIFNYFKLICELLEKKLKNRGIYANTLTVKLRD 304 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-- 352 + S+KL S+DI+N + W + G+ L DF Sbjct: 305 QNYKWKTKRKKY--SIKLFE----SQDIMNRVIEIFNQFWDEKK-LRGLGISLSDFGDIY 357 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 Q +LFD E++ ++ ++N + R +YF + Q + Sbjct: 358 QSDLSFDLFDQ-KYDSKKEKINALIKSINKDKTRKVIYFLNEYQDSQIHKSKQSK 411 >UniRef50_B8BXL1 REV1 protein n=1 Tax=Thalassiosira pseudonana RepID=B8BXL1_THAPS Length = 1148 Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats. Identities = 70/397 (17%), Positives = 138/397 (34%), Gaps = 57/397 (14%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---------------------NNDGCVIAR 40 L D++ F+AS P +PV V N+ + Sbjct: 456 VLLVDMDCFFASVSLRRYPQYRNQPVAVGHTGTVVLPCNYNNQKIVGTNLKNSSSELSTC 515 Query: 41 NAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR----VE 96 N A+ GV+ G + ++ ++E Y ++S+ V L + R +E Sbjct: 516 NYIARKFGVRKGMFLGDAIMVCP--DLIVLPYDFEGYEEVSSIVADELVRYAQRFHGCLE 573 Query: 97 IYSIDEAFCDL---TGVRNCRDLTD----FGREIRATVLQRTHLTVGVGIAQTKTLAKLA 149 S DEA+ +L ++ D +IRA ++ +T T +GI K LAKLA Sbjct: 574 QVSCDEAYLELNLSPDDCEDSNVEDFVKFLAEQIRAYIVNKTECTASIGIGSNKFLAKLA 633 Query: 150 NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT 209 K E + ++ L + D+ GIGR+ KK+ ++TV D+ + Sbjct: 634 ADKVKPDASYLV--------EDWQTFLNGLTLRDLPGIGRKFEKKMTPHHLRTVNDIWEL 685 Query: 210 ---DIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + + + ++ G+ + ++ I ++G R + Sbjct: 686 GDSAESILGEIIGRGNALKILQFCGGKDDRAVTP--AARKSIGAECNYGVRFDGPYGVDY 743 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTS--------PFALNEPYYGNSASVKLLTPTQ 317 + + +++ + + S F + S S+ + T+ Sbjct: 744 MLAGLSKEVEKRMTLAEVRGSKLVLKVMKSRDASKQPGKFLGHGACDSLSKSIDIPL-TR 802 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 S I AA R + + + G+++ + G Sbjct: 803 KSDAITAAAMRLFEQLSIDECLIRGMGLVVNSLVTDG 839 >UniRef50_A3TNV0 Putative uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TNV0_9MICO Length = 347 Score = 273 bits (700), Expect = 7e-72, Method: Composition-based stats. Identities = 86/354 (24%), Positives = 149/354 (42%), Gaps = 24/354 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AF+AS E P L G+P+VV V + EA+ALGV G P F+ Sbjct: 8 VLIHADADAFFASVEQRDHPHLRGRPMVVGPQ---VVACASYEARALGVHAGMPLFQAVR 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 + ++ + Y S +M+ EL+P VE S++EAF D++ + + + Sbjct: 65 RWPE--LLVAPFRAQAYESASADLMALFRELTPLVEPGSMEEAFLDVSALDGGSVEEAGR 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+RA + L V G+A+ K AKLA+ AK + + + E + ++ Sbjct: 123 LAGELRARAHRELGLPVSCGVARAKLFAKLASRRAKPDG------LVVVDAETEARVRPR 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI--RKHFNVVLERTVRELRGEPCLQ 236 LPV D+WG+G + KL G+ V DLA + + R+ + + + G Sbjct: 177 LPVADLWGVGPMTTDKLHDAGVVLVADLAGWTVDGLVERRVAKAMAKNLIAIRDGVDDAT 236 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 ++ ++ I RS G ++++A+ RA +L + + + ++ Sbjct: 237 IK-LPTARKSISSQRSLGRSTRQRSTVQEALRDNVIRALNRLGDDPRPATRLDVHLRYDD 295 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA--IWQAGHRYQKAGVMLG 348 L PT+D +I AA +L+ + G GV G Sbjct: 296 DHAVVVPGA------LGEPTRDPATLIGAALAALERTAYEEDGRGVTMVGVTFG 343 >UniRef50_Q6KI15 DNA-damage repair protein n=1 Tax=Mycoplasma mobile RepID=Q6KI15_MYCMO Length = 411 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 76/404 (18%), Positives = 168/404 (41%), Gaps = 24/404 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARN-AEAKALGVKMGDPWFKQKD 60 D ++F+ + RP+L GK V V S +++ EAK G K+ + + Sbjct: 7 IFHIDADSFFVNSIITIRPELKGKEVAVSSTKSSSIVSSLSYEAKQKGAKVPMQMREVRK 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 ++ N++L++ +SN++ L + + ++EI SIDE + D+T + + + + Sbjct: 67 YCP--NIITVLPNFKLFSIISNKIFDYLAKNFTKKLEIASIDECYLDVTDILHNYENKYN 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R+++ V + T + + +GI+ K LAK+A+ AK + ++++ Sbjct: 125 LARKMQEGVYKYTKIPISIGISHNKFLAKMASPLAKPNGIAHL------DKNNFKEILFP 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF-IRKHFNVVLERTVRELRGEPCLQL 237 + + +GIG+ +KL+++ + + DL D ++ F L G ++L Sbjct: 179 MKISKFYGIGKSSIEKLNSIDVNFIKDLLDESKEASFKRIFKNRWIDIKNNLNGNGSIEL 238 Query: 238 EEFAPTKQEIICSRS-FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + +E+ ++ F + I D + + + + + + I IK Sbjct: 239 DLEHNDVKEMGKEKTFFEQSIDDRNIILKELEKLSEIVSHNAKQRFNAGYVIKVKIKYYN 298 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QG 354 ++ S V L D+ +I A D +W + G+ LG + + Sbjct: 299 LSV------VSMQVSLPFAINDADEIFKNAISLFDKLWDE-KAIKLIGIKLGKLVNLFEE 351 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 Q++LF+ + ++ +++ N +Y A ++ Sbjct: 352 KTQISLFE--EKIMNNSKIDNLINDFNTNFNSRLIYKASNFPKK 393 >UniRef50_A6Q1N4 DNA polymerase IV n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q1N4_NITSB Length = 418 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 142/442 (32%), Gaps = 70/442 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 M D++AF+ S E + +P L P V Sbjct: 1 MKIHIDIDAFFISAERLKKPSLRNIPAAVGGRGDPFIFDSKNQHKMDLLQKHQGAFVPSI 60 Query: 34 ------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 G +I + EA+ GVK G + L + N+ Sbjct: 61 FYDADMEFDEYFKDGGKIRGIIITSSYEARRYGVKTGMSVKEALQLCPH--LKVVPPNHL 118 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTV 135 Y +S + + L++ P VE +SIDE F DL G F ++ + + L V Sbjct: 119 YYHKLSKALHNLLQKEIPVVEQFSIDEFFGDLDGYIEDEYTETFIHHLQILIKDKLGLPV 178 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +G A++K AKLA AK + E + +P++ GIGR K+L Sbjct: 179 SIGAAKSKWTAKLATSYAKPHGIKVV--------EDVEGFIQNIPLEKFPGIGRGYFKRL 230 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 GI+T+ + + I + + + GE L P ++ + SR+ Sbjct: 231 KRYGIQTLGETKYI--KDIFYSWKKPGITLYKRIWGEDNESLHPKIP-RKSVGISRTIN- 286 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 I+D +++ + A ++ + E +K S + + Sbjct: 287 PISDRKELKRRVIVLARHLSDSVAKERFNPTQYFLSLKYDTG-------YKSKAHIIDET 339 Query: 316 TQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 T A + + + + F +L + +L+ Sbjct: 340 TFSEAKCKRIALELFEQADKYPTASVTRIALRCLRFKKFSSYELL---NWKKDKKFTKLL 396 Query: 375 TVMDTLNAKEGRGTLYFAGQGI 396 + K G + + + + Sbjct: 397 QQSRKVRQKYGMDLIKWGVELM 418 >UniRef50_P75241 Uncharacterized protein MG360 homolog n=3 Tax=Mycoplasma RepID=Y537_MYCPN Length = 412 Score = 270 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 81/392 (20%), Positives = 155/392 (39%), Gaps = 28/392 (7%) Query: 13 SCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 S E + P+L +P++V + + V N A++ G+K G P K +L + + + Sbjct: 31 SVEEIENPELKNQPLIVGNRTSRSVVSTCNYLARSYGIKSGMPIAKALELCPQA--IFAT 88 Query: 72 SNYELYADMSNRVMS-TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 S++ Y S ++ + E+ + V SIDE F + R + I+ V ++ Sbjct: 89 SHFRNYRKYSAKIFAMIAEQFNLEVHTLSIDEGFVCFRD-LSPRKAFSLAKRIQRHVYEQ 147 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 + + +GI+ TLAK+ ++ AK + GV + E +RK + LP+ ++ GIG+R Sbjct: 148 LNFHISIGISNQFTLAKIFSNQAKPF-----GVKSCFSKEVKRK-LWPLPIVELPGIGKR 201 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKH-FNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 + DLA + K F + E GE Q E + I Sbjct: 202 QLDNAFKNNFHKIGDLAKCKDVTLFKRVFGIAWESLHAVALGETYTQ-SEQDVKSRSIAV 260 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSAS 309 S + ++Q + S +L+ Q C+ + +K++ F + NS S Sbjct: 261 SETLEYLNYSSNQLQQKLTSIFNELYARLQLSFQMCKGVVVQLKSNDFIV------NSHS 314 Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQA-GHRYQKAGVMLGDFFSQGVAQLN---LFDDNA 365 + T D + ++ + + + G + GV + + LF + Sbjct: 315 QSIKKYTADYQTLLVIVKKLFNRLLMGVGLNIRLIGVSFFGLKNNPSSSRPEGLLFYEYQ 374 Query: 366 P-RPGSE----QLMTVMDTLNAKEGRGTLYFA 392 +P + L ++ +N G + A Sbjct: 375 QAKPKQQTAHFALDQMIYEINQSFGYEIIQRA 406 >UniRef50_B3QD61 DNA-directed DNA polymerase n=6 Tax=cellular organisms RepID=B3QD61_RHOPT Length = 412 Score = 270 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 10/208 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P L GKPV V + G V A + EA+ GV+ P K Sbjct: 23 IIHVDMDAFYASVEQRDDPALRGKPVAVGGSRERGVVAAASYEARKFGVRSAMPSVTAKR 82 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDF 119 ++ +E+Y +S ++ E + +E S+DEA+ D+T ++N D Sbjct: 83 QCP--DLIFVKPRFEVYKAISQQIREIFAEHTAIIEPLSLDEAYLDVTENLQNIPLARDI 140 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IRA + + T L GI+ K LAKLA+ K + + + E + L Sbjct: 141 ALAIRAKIKEVTGLNASAGISYNKFLAKLASDHRKPNGQY------VISPEMGPSFVEGL 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLA 207 PV GIG + K +A+GI+T D+ Sbjct: 195 PVGKFHGIGPATAAKFNALGIRTGSDIR 222 >UniRef50_A0LGS2 DNA-directed DNA polymerase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGS2_SYNFM Length = 393 Score = 270 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 71/403 (17%), Positives = 143/403 (35%), Gaps = 18/403 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D+ FYA E + RP+L + +V+ + V N+ A G++ G P + Sbjct: 5 IVHLDIPNFYAVLEELRRPELKKRSMVLAEPSARAIVQGINSNAGKEGIREGMPLAHARR 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDF 119 + RR V+ + + Y + +++ SP VE F DLTG + D Sbjct: 65 MCRR--VLAVAPDLRFYREEHQQILKEFGFFSPLVEGAWPGHYFVDLTGTQRLLGPGPDV 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + + + L +G+A K ++++A+ G ++ + ++ L Sbjct: 123 ACRMERHLATQRRLRARIGLAANKLVSQVASTCIVP------GDLNCIFPGGETSFLAPL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + G+G + +L I+ + LA + + F + R RG + Sbjct: 177 PVTSLPGVGAVTASRLADFNIRRIGQLAALSLEALCGVFGKMGSRLFNVARGIDPTPVLP 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + ++ + S D + + A LRS +++ I+ + Sbjct: 237 SRESPR-LVVAHSLERDEIDRDRLEALLFQQVEEAGWALRSHNRHPTRFVLEIRYADGIT 295 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 SA R + ++ ++ + L DF Q + Sbjct: 296 -----ARSAHALFSPAIHADRRLFRVILPVFRQLFNRRIALRRIVLELSDFAMP-FRQAS 349 Query: 360 LFD-DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 LF +++P G L +D + + G + + Q Q Sbjct: 350 LFSREDSPPSGERDLQQALDGIRGRFGNRAISWGNAMSGAQRQ 392 >UniRef50_UPI00017B5397 UPI00017B5397 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B5397 Length = 711 Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats. Identities = 70/404 (17%), Positives = 131/404 (32%), Gaps = 61/404 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P L P+ + ++ N A+ +GV K+ Sbjct: 39 IILHFDLDCFYAQVEMIRNPALREVPLGI--QQKYIIVTCNYVAREMGVTKLMSVANAKE 96 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--- 117 + +V + Y ++S +V L P VE DE F D+T + R Sbjct: 97 KCPQLVLVKGE-DLTHYREVSYKVTELLMSYCPLVERLGFDENFMDVTEMVERRLAETSE 155 Query: 118 -----------------------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 E+R + + LT GIA K LAKL Sbjct: 156 LDISFKGHVYGHVSAEVKATDHARLALGSHIAAELREAIHCKLGLTGCAGIATNKLLAKL 215 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLDAMGIKTVLDLA 207 + K Q+ + E ++ L + V G+G + +KKL +GI TV +L Sbjct: 216 VSGTFKPNQQTSLL------PENISDIVGCLSSLRKVPGVGHQTAKKLQDLGIFTVKELQ 269 Query: 208 DTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD---YPSMR 264 + + F +R + G + Q + SF + + + Sbjct: 270 HFPVNHLVGEFGRTAQRLKSLVLGVDDSPVTPTGAP-QSLSDEDSFKKMSSTKECLEKIE 328 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT-------- 316 + + S R ++R +++ + I+ A N+ + S + Sbjct: 329 ELLRSLVER--TRMRKDNRQPQTFRLTIRRYS-ATNKWFNRESRQAPIPNHVGQKITSGS 385 Query: 317 --QDSRDIINAATRSLDAIWQAG--HRYQKAGVMLGDFFSQGVA 356 ++ A + + V + ++ A Sbjct: 386 KEDAVAQLVPLAMKLFHKMVDTSAFFHLTLINVCFSNLRNRAAA 429 >UniRef50_A0RN38 DNA polymerase IV 1, putative n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RN38_CAMFF Length = 380 Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats. Identities = 76/406 (18%), Positives = 155/406 (38%), Gaps = 39/406 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND----------GCVIARNAEAKALGVK 50 MF D++ F+ S PDL GK V V N G +++ + EA+ LG+ Sbjct: 1 MFLHIDLDCFFVSASRTVNPDLNGKVVAVAGGNKTDIFGDFIESGIIVSASYEARRLGIG 60 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 + ++ ++ +N+ LY +SN + L + + +E YSIDE F +L G Sbjct: 61 CTMHSSIARKIYP--NIIILPTNFNLYKTLSNNLFKLLLDYTDEIEKYSIDEFFLNLKGT 118 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + D +F + ++ + L +GI++TK +AK A + AK + + + D+S ++ Sbjct: 119 KFENDPLNFAKILQNRIKNELKLPSSIGISETKFIAKFATNLAKPSKIKI--INDISEIQ 176 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 + G+G L + G+ + D+ + + I + Sbjct: 177 NYE-------IKMFPGVGASAENFLKSHGVIYIKDVFNA--QKIFAKLGKNGLILYSRIC 227 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G+ Q+ + P ++ + +R+F E I D + + + + ++ Sbjct: 228 GKSRDQIHKNRP-RKSLCIARTFKE-IRDRNIIEKRLMVLCRYVSFEVFMLGVNPTKFEL 285 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA-ATRSLDAIWQ-AGHRYQKAGVMLG 348 IK +ASV + ++ ++ + + V +G Sbjct: 286 KIKYKN------NRNINASVT--KHSIFTQKLLETSIKELFLKHDKTSDFAITYLSVGVG 337 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 AQ++LFD + + + + K G + G+ Sbjct: 338 GL--NEKAQMSLFD--IQNKKDKAISDTLAKIRLKYGVNAIKSGGE 379 >UniRef50_C5KD43 DNA polymerase IV, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5KD43_9ALVE Length = 585 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 74/411 (18%), Positives = 143/411 (34%), Gaps = 49/411 (11%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFR- 63 D++ FYA+ E P L P+ V D + N A+ GV+ P F ++L R Sbjct: 18 IDMDMFYAAVEIRDDPSLHDVPLAVGG--DAMISTANYVARKYGVRAAMPGFIARELCRR 75 Query: 64 -----------------RCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCD 106 G+ + Y S T+ P +++ S+DEA+ D Sbjct: 76 QGVELRLEGPSGVVVMMEGGLRFKPVDMPRYQAASKIFKDTVSLYGP-MKMLSLDEAYID 134 Query: 107 LTG-----------VRNCRDLTDFGREIRATVLQR-THLTVGVGIAQTKT-LAKLANHAA 153 +T + + +R V ++ + LT GIA+ LAK+A+ Sbjct: 135 ITAKVAEAAMVDESISEVEAASLLVSRMREEVCEKSSGLTCSAGIARGCFRLAKMASDVN 194 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIR 212 K + + + + + ++P+ + G+GR ++L A +GI V D+ Sbjct: 195 KPNGQFM----VPTTTQGMLEWLHSMPIRKLHGVGRVSERELSAGLGIHKVGDIIIKAAE 250 Query: 213 FIRKHFNVVLERTVRELRGEPCLQLEEFAPT--KQEIICSRSFGERIT-DYPSMRQAICS 269 + + + G ++ A + I RS + + + + Sbjct: 251 LLHAMSSSGGHWLIDAAMGVTDMEDVTAAAESGPKSISQERSLSTAKSGSAAYLHEVLEE 310 Query: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 ++ E + QY R ++ +KT F + S L + R + AA+ Sbjct: 311 LCSQVMELCAEKEQYGRCVTVKLKT--FEWDVKQ----KSNTLKREVRSGRLLYEAASEL 364 Query: 330 LD-AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 + A+ + GV + F + + D + +D Sbjct: 365 MSTALATLKKPIRLLGVRVSSFQTAVPQGQSTLGDFLAAHKASSSRVAVDE 415 >UniRef50_B9L8S0 DNA-directed DNA polymerase n=1 Tax=Nautilia profundicola AmH RepID=B9L8S0_NAUPA Length = 412 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 87/438 (19%), Positives = 157/438 (35%), Gaps = 68/438 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 M D+++F+ S + L KPVVV+ N Sbjct: 1 MKIHLDLDSFFVSAHRIEDKTLLNKPVVVVKRNDKEIFKNEKTKLLNLNEGAFTGDLIVG 60 Query: 34 ---------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA 78 G V+ + EA+ LG+K G + ++ + + + NY+LY Sbjct: 61 DEKYDKSYFLENGKVRGIVVTASYEARELGIKTGTTLAEALRIYPK--LTVLTPNYKLYH 118 Query: 79 DMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVG 138 +S ++ LE+ P VE YSIDE F DL G N ++ F + ++ + +R +L V +G Sbjct: 119 ILSYKLKLFLEKKIPLVEQYSIDEFFGDLEGWVNDGEIYGFIKTLKDEIWKRFNLPVSIG 178 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 A++K AKLA AK + + + + +PV+ GIG+RI K++ Sbjct: 179 AAKSKWTAKLATSFAKPDGIKVV--------KNIDEFIENIPVEKFPGIGKRIEKRIKEK 230 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 GI T+ D+ + + + + G ++ ++ I SR F + Sbjct: 231 GILTLGDVKR--EKEYFYSWGKAGVQLYNRVCGTDNEKVI-QKSERKSIGISRRFD-PVY 286 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 D + + I + ++ + F IK ++ + + Sbjct: 287 DRKEIIRRIGILCRYLSFLVKKKKVNPTFYYLSIKYKHSKKSKAHITLDRIF-------N 339 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 + G+ + F NLFD E+L + Sbjct: 340 EMLLKEVMVTLFYRADIEDDYIISLGISVSKFKKVS----NLFD-LEEDRKMEKLNDAIY 394 Query: 379 TLNAKEGRGTLYFAGQGI 396 L ++ G L A + I Sbjct: 395 KLRSRYGLSALISASEII 412 >UniRef50_A8PR16 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PR16_MALGO Length = 1199 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 69/412 (16%), Positives = 132/412 (32%), Gaps = 70/412 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---------NNDGCVIARNAEAKALGVKMG 52 D ++F+ S +P KPV V ++ V + N A+ GVK G Sbjct: 370 IVHIDFDSFFVSVSLRAKPAWRDKPVAVCHATLTGTDGSSSTSDVASCNYVARRYGVKNG 429 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + + L ++ ++ Y +S + + L ++ +++ S+DEA D T + Sbjct: 430 MSLRQARHLCPS--ILPVPYAFDAYYQVSLQFYAVLLHVADVLQVVSVDEALLDATDLLR 487 Query: 113 ------------------------------------CRDLTDFGREIRATVLQRTHLTVG 136 + G +R + T Sbjct: 488 ALCEAQASERFAWPTSDAILSRLEAQFRLHLARHAGVQPAHALGEALRDVIRLETQCEAS 547 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 VGI A+LA AK GV L +R + M L V D+WG+G + ++L Sbjct: 548 VGIGANILQARLATRQAKP-----CGVYVL---DRVEEHMQMLDVRDIWGVGFSLRERLL 599 Query: 197 A-MGIKTVLDL-ADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 A +G + D+ TD + + F ++ G L+ +Q + ++ Sbjct: 600 AWLGTTCIGDICQRTDEAHMIQQFGPKHGRALWQKFHGHDTHVLQATRE-RQSVGAHVNW 658 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRF-ISTFIK--------TSPFALNEPYY 304 G R+ D +R+ + A + H + + + F + Sbjct: 659 GVRLHDDTEVRRFLQDVCAEVMRRASHMHVSAATHVQLQVMQRADEAGESPKFLGHGLCR 718 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 S++ D + AA L + + + + Sbjct: 719 TFHRSIRRRVY--DRSSLYAAAWPLLQKLQIPAVDVRGIALSVSGLERGSTR 768 >UniRef50_A4HGJ3 DNA polymerase kappa, putative n=4 Tax=Trypanosomatidae RepID=A4HGJ3_LEIBR Length = 754 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 73/391 (18%), Positives = 132/391 (33%), Gaps = 50/391 (12%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++ FYA+ E P P+ V S + N A+ GV+ G P F Sbjct: 232 IYVHVDMDMFYAAVEMKKNPQYAEVPLGVGSM--AMLSTTNYLARQYGVRSGMPGFIGMR 289 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--- 117 L + +V +++ S + + P ++ +DE L + Sbjct: 290 LCPQ--LVIVPTDFAACRVESAKFKGVVRNYDPAAQVLGMDEIMMRLDDYLAQHHMDATT 347 Query: 118 -----DFGREI----RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 D I R V + T LT GIA T TLAK+A+ K + V L + Sbjct: 348 HAERFDVAERIIEECRRRVAEVTGLTASAGIAPTPTLAKMASDYKKPNGQFA---VRLFS 404 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 E ++++PV V GIG+ L +GI T+ ++ R E + Sbjct: 405 REAVMDYLASIPVRRVPGIGKSRESILAGLGIHTLGEVYQQRHRLFYILTRKTYEFLLAS 464 Query: 229 LRGEP------------------------CLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 G + E ++ + R+F ++ + ++ Sbjct: 465 AMGVGGMYDSLEAAPPSSAGTTTKTVAALDGESNEDDWRRKSVGQERTF-YKLKNRMELQ 523 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 ++ E L +E C + +K F + + S L T D + Sbjct: 524 AIAHMNLRQSHETLVAEDLLCSQVVLKLKHRSFHVKQ------HSKSLNLYTDDYEVLRR 577 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 A L + +++ G+ L + Sbjct: 578 ALDDLLLPVVDDFAKFRLLGIRLEKLRRRPQ 608 >UniRef50_Q8EWQ4 DNA-damage repair protein MucB n=1 Tax=Mycoplasma penetrans RepID=Q8EWQ4_MYCPE Length = 386 Score = 267 bits (684), Expect = 5e-70, Method: Composition-based stats. Identities = 73/401 (18%), Positives = 156/401 (38%), Gaps = 31/401 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D+++F+AS E RP+ P+ V + + N A+ LGVK K + Sbjct: 5 IFHIDMDSFFASVELAERPEYEKLPLAVGHL---VIASANYVARGLGVKSAMNIVDAKKI 61 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL--TGVRNCRDLTDF 119 + ++ N Y MS+++ S L LS +E SIDE + D+ T N +++ +F Sbjct: 62 CPQLTIIY--PNKNKYTSMSDKIYSFLSSLSKNIETGSIDEWYLDVSNTQYENWKEI-EF 118 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++ ++ Q+ +L VG + T LAK+A + AK + + + L Sbjct: 119 ASLVKNSIKQKFNLNCTVGNSFTPFLAKMATNLAKPDG------FLTLTKDNFKSYIYDL 172 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLAD-TDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + + GIG ++++L + + + D+A+ + IRK + + + G C + Sbjct: 173 HISKIIGIGPSLTRQLIELNLHYIKDIANVKNDYLIRKKIGLHWSKLRMNVLGIICDPIN 232 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + S+S ++Y + I L+ + + ++ I+ S Sbjct: 233 P-DYKRKNLGRSQSI-RNYSEYQEFLKLIKELTDDINSGLKYQDFMFKSVNIKIRYSDGD 290 Query: 299 LNEPYYGNSASVKLLTPTQDSRDI-INAATRSLDAI--WQAGHRYQKAGVMLGDF-FSQG 354 + S I ++ + I + + + + + Sbjct: 291 ------SATKSFNF---VNFQNQIPLHVVVDLFEQISDFSKYDQVINLSITANNIMENDN 341 Query: 355 VAQLNLFDDNAPRPGSE-QLMTVMDTLNAKEGRGTLYFAGQ 394 QL +FD + +E +L + +N + +++ Sbjct: 342 NEQLTIFDSPTQKISTESKLEKIRKQVNKTLNKKIIHYPSS 382 >UniRef50_Q4PCE3 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PCE3_USTMA Length = 1488 Score = 266 bits (682), Expect = 8e-70, Method: Composition-based stats. Identities = 74/423 (17%), Positives = 141/423 (33%), Gaps = 73/423 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND----------------------GCVI 38 + D ++F+ + RPDL KPVVV + Sbjct: 524 VIMHIDFDSFFVAVGLKKRPDLKDKPVVVCHGTGFGLPAAKAGDENRPADNQSSSTSEIA 583 Query: 39 ARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIY 98 + + +A+ G++ G + K L + ++E Y +S + L E S ++ Sbjct: 584 SCSYKAREFGIRNGMSLGQAKRLCSHVETI--PYDFEAYNSVSLTFYTFLLEHSDALQAV 641 Query: 99 SIDEAFCDLT--------GVRNCRDLT------------------DFGREIRATVLQRTH 132 S+DEA D++ G N L R + R Sbjct: 642 SVDEALVDVSLLLQSMRDGDTNDGSLYQRYRDHLGSQGQVWTAEKQLAEAFRDEIRDRCE 701 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 +GI LA+LA AK GG L++ + ++ ++AL VDD+ GIG + Sbjct: 702 CEASIGIGSNILLARLATRKAKP-----GGSFHLTD-DAKQLFLNALDVDDLHGIGWSLR 755 Query: 193 KKLDAM-GIKTVLD-LADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 ++ + + + L+ T+ R + F + + G +LE +Q + Sbjct: 756 DRIRELFQTINIGEILSKTNKRRMMAEFGPKKGKMIWDRMHGIDADRLEGNKL-RQSVGS 814 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI----KTS-----PFALN 300 ++G R + +++ ++ R +S + KT+ F + Sbjct: 815 HVNYGIRFLTEQEAENFVTGMCQEVSQRAKAVKLRGRQVSVQVMVRAKTAPVEAPKFLGH 874 Query: 301 EPYYGNSASVKLLTP----TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + S + P D I AA + + + + L Sbjct: 875 GVCDTHHRSAPVSGPGGVAIDDEARIRAAAWPLIRDLKADPKELRGIAISLNKLEPADAN 934 Query: 357 QLN 359 L+ Sbjct: 935 VLS 937 >UniRef50_Q7NUT5 UmuC protein n=1 Tax=Chromobacterium violaceum RepID=Q7NUT5_CHRVO Length = 301 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 115/295 (38%), Positives = 166/295 (56%), Gaps = 5/295 (1%) Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMSALPVDDVWGI 187 + + V VGI +KTLAKLANH AK+ GV D S + LM+ LP VWG+ Sbjct: 9 QIGIPVSVGIGPSKTLAKLANHVAKRVAGWDDGVFDWSWLSPAETDALMARLPAGKVWGV 68 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 G R++ L I T L L D R+++++F+V LERT EL G CL LEE A +Q+I Sbjct: 69 GPRLAAGLAEKRIDTALKLKRADPRWLQRNFSVTLERTAAELNGVSCLSLEEAAQPRQQI 128 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 I SRSFGE+ +D + A+ + ARAAEKLR + R + +TSPF ++PY+G + Sbjct: 129 ISSRSFGEKTSDLAVLSAAVSHHIARAAEKLREQGSAARLVGVSARTSPF-GDDPYHGYT 187 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 V L P+ D+ ++ AA L A+++ G RYQKAGV+L + + Q +LF AP Sbjct: 188 -VVPLAQPSDDTLELAAAALAGLRAVYRRGLRYQKAGVVLMELSPRERRQADLF-AAAPD 245 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 P ++LM +D +N G + A + + W+M++ SP YTTR L + Sbjct: 246 PRRQRLMRTLDAINRAYGHSCVKLASEALTPNWEMRQDQRSPCYTTRFDQLPTAR 300 >UniRef50_C2KQG7 ImpB/MucB/SamB family DNA-damage repair protein n=2 Tax=Mobiluncus mulieris RepID=C2KQG7_9ACTO Length = 545 Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats. Identities = 86/524 (16%), Positives = 153/524 (29%), Gaps = 119/524 (22%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++ D+ +F+AS E R D +VV +A + K GV F Sbjct: 16 IYMAIDLKSFFASVEARERGLDPMNTNLVVADETRTEKTICLAVSPALKTFGVPGRPRLF 75 Query: 57 KQ--------KDLFRRC-----------------------GVVCFSSNYELYADMSNRVM 85 + +D RR + +LY + S V+ Sbjct: 76 EVIAQVKAVNRDRARRASQHRLAGSSYYLDELRANPALAVDYLVARPRMKLYMETSATVL 135 Query: 86 S-TLEELSP-RVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQ 141 S L +SP V +YSIDE F D TG +F ++ V T +T GI + Sbjct: 136 SRYLHWVSPADVHVYSIDEVFIDATGYLERYRATPVEFATKLIHDVYAHTGITATAGIGE 195 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSN---LERQRKLMSALPVDDVWGIGRRISKKLDAM 198 LAK+A K V L+ + +L + P+ D W +G ++KL+AM Sbjct: 196 NLYLAKVAMDILAKHAEADEHGVRLAELTMRTYREQLWTHRPLTDFWRVGPATARKLEAM 255 Query: 199 GIKTVLDLADTD---------IRFIRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQE 246 + T+ D+A + + F V E + G ++ + P + Sbjct: 256 DLFTMGDVARASLGERYDRANEEALYRIFGVNAELLIDHAWGWEPTTIADIKSYHPQAKS 315 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT-----------S 295 + + ++ R + A + L + + + + Sbjct: 316 VNVGQVLPRA-YEFGEARMIVREMADGLSLDLVDKGLTTDQVVLTVGYDTENLADPARAA 374 Query: 296 PFALNEPYYGNSA--------SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + S L T +R ++ A TR + I G ++ V Sbjct: 375 TYRGEVKRDHYGRLIPKPVHGSENLGRATASTRLLLEAVTRLFERIVDPGLLVRRMYVSA 434 Query: 348 GDFFSQGV----------------------------------AQLNLFDDNAPRP----- 368 + QL+LF D Sbjct: 435 SHIRREEALVPRVDVVDVADGSGVVGGTGGFMSGEPKSPGVGEQLDLFTDYEALAAVEAV 494 Query: 369 ------GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 + + + K G+ ++ + R Sbjct: 495 EQAALVAERRNQEALLRIKRKFGKNAVFRGVNLSAGATALDRNR 538 >UniRef50_UPI000180D06B PREDICTED: similar to GH15415 n=1 Tax=Ciona intestinalis RepID=UPI000180D06B Length = 593 Score = 263 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 61/339 (17%), Positives = 123/339 (36%), Gaps = 73/339 (21%) Query: 1 MFALCDVNAFYASC------------------------ETVFRP------------DLWG 24 + D++ F+ S E RP + G Sbjct: 264 VIMHIDMDCFFVSVGLLSRPHLKGRPVAVTHHSSSTPSEHKQRPGTDPNFERSYYKEKLG 323 Query: 25 K---------PVVVLSNNDG----------------CVIARNAEAKALGVKMGDPWFKQK 59 K PV + +DG + + + EA+A G++ G + + K Sbjct: 324 KNFEQKFPSNPVGPSNPSDGQASGSASKANTVPSYSEIASCSYEARAAGLRNGMFYGRAK 383 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD- 118 +L ++ ++E Y D+S ++ + L + +E S DEA D+T + LT Sbjct: 384 ELCP--DLIAIPYDFEAYKDISQKLYTVLASYTQSLEAVSCDEALLDVTQLVEDTSLTPQ 441 Query: 119 -FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + IR +L T GI LA++A K + L++ + + Sbjct: 442 VIAQNIRGKILDATGCNASAGIGPNIALARMATRLGKPNGQHE------VTLQQAEEFIR 495 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 LPV D+ G+GR + +L +G T +L ++K F ++ +G + Sbjct: 496 DLPVKDLPGVGRATASRLRELGASTCGELQKIHPDLLKKEFGNKTGQKLHELSKGIDERE 555 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + + ++ + ++G R+ M+ + + + + Sbjct: 556 V-CQSKERKSVSADVNYGIRLKTEDEMKTFLNNLSNEVS 593 >UniRef50_B7LX10 Protein impB n=4 Tax=Enterobacteriaceae RepID=B7LX10_ECO55 Length = 326 Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats. Identities = 149/259 (57%), Positives = 189/259 (72%), Gaps = 3/259 (1%) Query: 158 RQTGGVVDLS--NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 Q GVV L+ N R KL+ PV +VWG+GRR+++KL+A+GI T L LA + FIR Sbjct: 69 PQFSGVVALTAENRNRILKLLGLQPVGEVWGVGRRLTEKLNALGINTALQLAQANTAFIR 128 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 K+F+V+LERTVREL GE C+ LEE P KQ+I+CSRSFGERITD +M QA+ YA RAA Sbjct: 129 KNFSVILERTVRELNGESCISLEEAPPAKQQIVCSRSFGERITDKDAMHQAVVQYAERAA 188 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 EKLR E QYCR ++TF++TSPFA+ EP Y N+A KL PTQDSRDII AA R+L+ +W+ Sbjct: 189 EKLRGERQYCRQVTTFVRTSPFAVKEPCYSNAAVEKLSLPTQDSRDIIAAACRALNHVWR 248 Query: 336 AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 G+RY KAGVML DF G+AQ LFD+ PR SE+LM +D LN G+G ++FAG+G Sbjct: 249 EGYRYMKAGVMLADFTPSGIAQPGLFDEIQPRKNSEKLMKTLDELNQS-GKGKVWFAGRG 307 Query: 396 IQQQWQMKRAMLSPRYTTR 414 +WQMK+ MLSP YTT+ Sbjct: 308 TAPEWQMKQEMLSPSYTTQ 326 >UniRef50_Q30PG7 DNA-directed DNA polymerase n=2 Tax=Campylobacterales RepID=Q30PG7_SULDN Length = 444 Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats. Identities = 73/443 (16%), Positives = 142/443 (32%), Gaps = 68/443 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 M D++ F+ S + P L KPV + + Sbjct: 22 MKIHIDIDCFFVSAARIQEPSLEFKPVAIGGRSDTKIFNKDAKKQAVNFENSGSFVPTFY 81 Query: 34 --------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 G + + EA+A GVK + L ++ + + Sbjct: 82 KAYEERDDDIDAFKDEDGRVRGILTTSSYEARAYGVKTAMSIKEALSLCPH--LIIKAPD 139 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 LY +S+ + L+ P VE SIDE + DL+G + D+ +F +R + T L Sbjct: 140 MSLYQKLSHELHEFLQTKIPLVEQASIDEFYGDLSGWVDDSDVPNFIAALRDEIKSVTKL 199 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 V +G A+T+ +AKL+ AK + + + +PV GIG+ +S+ Sbjct: 200 PVSIGAAKTRYIAKLSTTYAKPFG------CRVIFENELESFIEKIPVTKFAGIGKSMSE 253 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 KL I T+ +L+ + + + + G + ++ I SR+F Sbjct: 254 KLLDAQIHTLGELSKRRGT--IESWGPYAKELYLRVCGLSDDDI-TTKHIRKSIGISRTF 310 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 + D +R+ + A + + + + + S Sbjct: 311 D-PLRDRNELRRRVHVLARHLSFAILKLKVIPTVFHLSLNYE--MSQKSHKNISLCEIFT 367 Query: 314 TPTQDSRDIINAATRSLDAI-WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 + + + D + + F + +L+L + Sbjct: 368 E-----KKFDSLCLKLFDEADVHKRLHLIRMSINCSSFTRESRKELSLIG-FEEDQKMYR 421 Query: 373 LMTVMDTLNAKEGRGTLYFAGQG 395 L + K G L + + Sbjct: 422 LTNHSQEIREKYGIDMLKWGSEL 444 >UniRef50_Q0IJ37 DNA polymerase iota n=5 Tax=Eukaryota RepID=Q0IJ37_XENTR Length = 742 Score = 262 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 79/403 (19%), Positives = 140/403 (34%), Gaps = 62/403 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P+L KP+ + V+ N EA+ GV ++ Sbjct: 51 VIVHIDMDCFYAQVEMIRNPELRNKPLGI--QQKYIVVTCNYEARKFGVTKLMLIKDARE 108 Query: 61 LFRRCGVVCFSS-NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD- 118 + +V S + Y +MS R LEE SP+VE DE + D+T + + + + Sbjct: 109 KCPQ--LVLVSGEDLTPYREMSYRATELLEEFSPQVERLGFDENYIDVTELVDKKLQEER 166 Query: 119 ---------------------------------FGREIRATVLQRTHLTVGVGIAQTKTL 145 EIRA + R LT G A K L Sbjct: 167 GNGRNPGVCGHVYSDQKMNVNDWAHVRIAAGSHIASEIRAALYNRLGLTGCAGTASNKLL 226 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP-VDDVWGIGRRISKKLDAMGIKTVL 204 AKL + K Q+ E L+++L V + GIG + SK+L+++G+ + Sbjct: 227 AKLVSGTHKPNQQTALL------HESHSHLINSLDHVKRIPGIGYKTSKRLESLGLSRIS 280 Query: 205 DLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 DL I + K F R RGE + P Q I SF ++ + + Sbjct: 281 DLQACPITLLEKEFGSSVAHRIQMLSRGEDDSAVVPSGPP-QSISDEDSF-KKCSTVSEV 338 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN-SASVKLLTPT------ 316 + + ++ + + + I+ F+ + ++ S + Sbjct: 339 KIKMEERLRNLLVRISKDGRIPHTLRLTIR--QFSPSNKWFNRESRQCPIPAHISQNIGA 396 Query: 317 --QDSRDIINAATRSLDAIWQAG--HRYQKAGVMLGDFFSQGV 355 Q ++ R + + V + + Sbjct: 397 ECQAVPALMELLMRLFEKMIDVKMQFHLTLLNVCFSNLKASNS 439 >UniRef50_B7FT83 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FT83_PHATR Length = 460 Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats. Identities = 80/389 (20%), Positives = 148/389 (38%), Gaps = 46/389 (11%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 D++ FY +CE + RP+L +P V N ++ N A+ GV+ + L Sbjct: 82 VDMDMFYMACELLERPELASEPACVGEN---MILTSNYLARKYGVRSAMAGWIGDRLVEE 138 Query: 65 C-----GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 ++ S ++LY S++V + L + P + YS+DEA+ DL + ++ Sbjct: 139 LSSGTKKLIHVPSRFDLYRTKSHQVRNVLSQYDPHLRCYSLDEAYMDLAPYLALKLTRNW 198 Query: 120 GRE--------------IRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV 164 E +R+ V + T LT G+A L+K+A+ K + + Sbjct: 199 DHERISAVLAGSQVLQDMRSRVTEVTGGLTCSAGLAPNFLLSKIASDRNKPNGQ----CL 254 Query: 165 DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER 224 S+ E + LP V GIGR +K L + GI TV DL + +R F Sbjct: 255 VPSDHESIIGFLHPLPTRKVSGIGRVTAKILSSFGIATVADLYR-ERSLVRFLFQEASAE 313 Query: 225 TVREL----RGEPCLQLEEFA----PTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 + G ++ P ++ I R+F + + ++ + A + Sbjct: 314 FLLRASIGCSGSDERNADDVETDDGPGQKGISRERTFAAK-ESWTAINLKLEEIAELLSS 372 Query: 277 KLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA 336 ++ ++ + ++ +K F S S+ Q + D+ A L + Sbjct: 373 DMKHKNIFAHTVTVKVKLRSFD----CLSRSRSLGRGVFIQAAADLRPIALDLLRELKDE 428 Query: 337 ---GHRYQKAGVMLGDF--FSQGVAQLNL 360 + G+ F S AQ ++ Sbjct: 429 FSGSFAVRLLGIRCSSFMGESHDKAQKSI 457 >UniRef50_C0WCL1 DNA-repair protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCL1_9FIRM Length = 495 Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 83/465 (17%), Positives = 146/465 (31%), Gaps = 63/465 (13%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E V R D +VV ++ +A + K GV F+ Sbjct: 23 YICIDLKSFYASVECVDRGLDPLDTCLVVADKSRSDRTICLAVSPPLKKRGVPSRPRLFE 82 Query: 58 QKDLF-----------------------------RRCGV--VCFSSNYELYADMSNRVMS 86 + + + Y +MS + Sbjct: 83 VIRKVDEINALRRSKAPQRSFRGMSHFDSQLRHHPEKALSYIVAMPRMQRYIEMSRDIYG 142 Query: 87 TLEELS--PRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQT 142 + + +YSIDE D T + + V Q+T +T GI Sbjct: 143 IYLQYIAPQDIHVYSIDEVMIDATPYLSTYGMTPYTLAMTMIRDVYQKTGITATGGIGTN 202 Query: 143 KTLAKLANHAAKKW---QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 L+K+A K + L +R L P+ D W IG +++L A G Sbjct: 203 LYLSKVAMDIVAKALMPDPYGVRIAFLDETAYRRTLWGHQPLTDFWRIGPGSARRLSAHG 262 Query: 200 IKTVLDLADTDI---RFIRKHFNVVLERTVRELRG-EPCL--QLEEFAPTKQEIICSRSF 253 + T+ D+A + + F + E + G E C ++ + P + S+ Sbjct: 263 LYTMGDIARLSLSDASLLYDWFGINAELLIDHAWGWESCRMSDIKRYIPKASSLGTSQVL 322 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP-----FALNEPYYGNSA 308 + + R L + ++ I F+ + P G S Sbjct: 323 PKP-YSPENARLIAWEMTDELILDLARKRLVTDEVAITIGYERTQPQGFSRDLPPSGRSH 381 Query: 309 -SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG----VAQLNLFDD 363 S +L T + I+ + D + ++ V SQ V Q LF + Sbjct: 382 GSARLAGWTHAGQPIMASMMALYDRLAHPYLWVRRMSVTAVHVRSQDIQDPVRQGFLFAE 441 Query: 364 NAP----RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 P P +L ++ + GR L ++ + R Sbjct: 442 QTPLLDGDPREARLQEAALEVHHRFGRNALVKGRNLCKEAMTITR 486 >UniRef50_C5DV83 ZYRO0D04664p n=1 Tax=Zygosaccharomyces rouxii RepID=C5DV83_ZYGRO Length = 817 Score = 260 bits (666), Expect = 6e-68, Method: Composition-based stats. Identities = 67/383 (17%), Positives = 135/383 (35%), Gaps = 30/383 (7%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQK 59 D + F+AS + D+ P+VV + + N EA+ G++ G + Sbjct: 228 VFHIDFDCFFASVSAMANGFDIHADPIVVCHGTKNSDIASCNYEARRYGIRNGMWVGTAE 287 Query: 60 DLFRRCG-VVCFSSNYELYADMSNRVMSTLEEL-SPRVEIYSIDEAFCDLTGVRNCRDLT 117 + +V +++ + MS R L + V SIDEA C + G + + Sbjct: 288 RMMPGGKRLVRLGYDFDQFELMSKRFYQILHDSQFQLVLPISIDEAVC-IAGNLSHMECD 346 Query: 118 DFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + IR V T TV +G A + LA+LA +K G ++ E Sbjct: 347 SICQRIREHVSSVTNGCTVSIGCANSLVLARLALKWSKPN-----GYRIVNCDELDATFW 401 Query: 177 SALPVDDVWGIGRRISKKLDAMG---IKTVLDLADTDIRFIRKHFN-VVLERTVRELRGE 232 S L +DD+ G+GR ++ K+ I + +L + +++ + + +RG+ Sbjct: 402 SNLKIDDLPGVGRSLAYKISEYSNPPIGNLCELRQMTLDSLQRCVGEKMGNKIYLAVRGK 461 Query: 233 PCLQLEEFAP------TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 + + ++ + ++G R + Q I +KL+ ++ Sbjct: 462 DDEESGKIIYDPKQFFQRKSLSIDINWGIRFDTIYEIDQFIDRCTQYLIDKLKELNKKTS 521 Query: 287 FISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 ++ I + + S +L PT + I + ++ Sbjct: 522 QLTLKIMKRSKDESIEPPKYLGMGKCDPFARSTRLGVPTDEFGIITTEIKSTFRSLCCPP 581 Query: 338 HRYQKAGVMLGDFFSQGVAQLNL 360 + + + Q L Sbjct: 582 KELRGIAIQFNKLENSVSNQSKL 604 >UniRef50_B9KDE6 UV damage repair protein, ImpB/MucB/SamB family n=7 Tax=Bacteria RepID=B9KDE6_CAMLR Length = 488 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 79/469 (16%), Positives = 153/469 (32%), Gaps = 75/469 (15%) Query: 1 MFALCDVNAFYASCET-VFRPDLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++A D+ +FYAS E + D ++V ++A + K + F Sbjct: 5 LYASIDLKSFYASVECILRNLDPLTTNLIVADKERTDKTIILAISPALKTYNIPSRLRLF 64 Query: 57 KQKDLFR-------------------------------RCGVVCFSSNYELYADMSNRVM 85 + K + + Y + S ++ Sbjct: 65 EFKQKIHLLNKERLKQSKKHIFKAKSFNINELNKDINLEIDYIIAKPSMATYIEFSAKIY 124 Query: 86 STLEELSP--RVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQ 141 S + + +YSIDE F DL+ + + ++ +L + GI Sbjct: 125 SIYLKYFDPKDIHVYSIDEVFIDLSSYLDKYKLSAYELLTKVLLDILHTCKIIATAGIGT 184 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQR---KLMSALPVDDVWGIGRRISKKLDAM 198 LAK+A K Q+ + ++ L+ + K+ + P+ D W IG+ I+ KL+ + Sbjct: 185 NLYLAKIAMDILAKRQKIDENGLLIAFLDEKLYKYKMWAHKPLKDFWRIGKGIALKLENL 244 Query: 199 GIKTVLDLADTD---IRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 I T+ DLA + KHF + E + G +++ + S+ + Sbjct: 245 NIYTMGDLARFSLNNEALLYKHFGINAELLIDHAWGIETCTMKDIKN-YKSQNHSKIMAK 303 Query: 256 RI---TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP-----------FALNE 301 + D+ + + +L + I+ I+ F + + Sbjct: 304 VLPFAYDHNQAIKVLKELIDHLTLELIKHNLKTNHITLDIQYDKSNLENLNSYKGFIIKD 363 Query: 302 PYYGN-----SASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS---Q 353 Y N AS+ L T + I + I +K + L + + + Sbjct: 364 DYGRNIPKNAHASINLENYTNSLKLINKKSLELFYKIIDKNLSIRKISLSLNNITTNAQE 423 Query: 354 GVAQLNLFDD-------NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 +LNLF D E+L + K G+ + A Sbjct: 424 NFQELNLFSDLNEILQEQHQLAKEEKLQKARLQIMHKFGKNAILKASSL 472 >UniRef50_A8ND78 ImpB/MucB/SamB family protein n=1 Tax=Brugia malayi RepID=A8ND78_BRUMA Length = 715 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 59/369 (15%), Positives = 121/369 (32%), Gaps = 62/369 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND------GCVIARNAEAKALGVKMGDPW 55 D++ F+ S P+L GKPV + + + + + EA+ GV+ G Sbjct: 222 ICHIDLDCFFVSVALRTHPELIGKPVAITHSRGTEGAGMSEIASCSYEARXRGVRNGCFI 281 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR---N 112 + + + ++C ++ Y +S + + L + + S DE + DL + + Sbjct: 282 KEARKVCP--DLICLPYQFDDYRHISKEIYAVLSGYTLSIRAVSCDEMYVDLESLCKEMH 339 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 ++ + IR+ +L +T VGI T +A++A AK + + Sbjct: 340 IANVMEIISVIRSEILTKTGCNASVGIGNTMLIARIATRHAKPNGQF------MIKXGDI 393 Query: 173 RKLMSALPVDDVWGIGRRISKKL-DAMG-IKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 +L+ + + GIG I KL +A G + DL I ++ Sbjct: 394 DELIKKEKISSLPGIGYNICAKLKNAFGEMNLCEDLQKVPINRLQNVLGEK--------- 444 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 I T + + + + +KL I+ Sbjct: 445 ----------------IG---------TQEDEVMEFLGKMCSELEKKLHIARMTASTITL 479 Query: 291 F---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQ 341 + T + + + + T + + A + + AI + Sbjct: 480 RLLIRASDAPLVTEKYLGCGKCDAITRTAHVNGATANKAVLHAEAKKLMKAINPIISDLR 539 Query: 342 KAGVMLGDF 350 G+ L Sbjct: 540 GIGIQLTHL 548 >UniRef50_C2JSZ5 Possible DNA-directed DNA polymerase (Fragment) n=3 Tax=Lactobacillus RepID=C2JSZ5_LACRH Length = 366 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 80/359 (22%), Positives = 128/359 (35%), Gaps = 19/359 (5%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAKA-LGVKMGDPWF 56 D +FYAS E + R + VLS D G V+A + K V + F Sbjct: 16 IMCIDCKSFYASVEAIRRGIHPLAADIAVLSKGDSPGGLVLAASPNCKKRYHVGLSTRRF 75 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE--IYSIDEAFCDLTGVRNCR 114 + +D + Y + + + + YSIDE+F D+T N Sbjct: 76 QLRD---DMQIELAEPRMADYISKNYGINRIYRQFTDDAHWYPYSIDESFIDVTHSHNLF 132 Query: 115 DLT-DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + +I+ V + + VGI Q LAKLA K + Sbjct: 133 GSNQEIATQIQKRVFDQFGIITTVGIGQNPLLAKLALDNEAKKAAPW--QATWTYERVPE 190 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + + D W IG R +K+L+A+GI + DLA TD + + F V+ + G Sbjct: 191 TIWQLHDLADFWSIGSRTAKRLNAIGIHNLYDLAHTDRLLLHQRFGVLGDALYFHSWGID 250 Query: 234 CLQLEEFAPTK---QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 L + + S+ T + + A + A +LR +S Sbjct: 251 YSDLTRRYLPRAENKGYGNSQVLMRDYTQAREIEVVLSEIADQVAGRLRHHQVQGEVVSV 310 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 I + A G A +K+ PT + D+I A + W GH + V + Sbjct: 311 GIGYAD-AEEAGTSGFGAQMKID-PTNRTDDLIRATRYLFHSKWN-GHAVRNVSVRVNR 366 >UniRef50_Q9UNA4 DNA polymerase iota n=24 Tax=Chordata RepID=POLI_HUMAN Length = 715 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 80/399 (20%), Positives = 143/399 (35%), Gaps = 61/399 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P+L KP+ V V+ N EA+ LGVK K+ Sbjct: 29 VIVHVDLDCFYAQVEMISNPELKDKPLGV--QQKYLVVTCNYEARKLGVKKLMNVRDAKE 86 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD----- 115 + +V + Y +MS +V LEE SP VE DE F DLT + R Sbjct: 87 KCPQLVLVNGE-DLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQS 145 Query: 116 ------------------------------LTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + E+R + + LT G+A K L Sbjct: 146 DELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLL 205 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP-VDDVWGIGRRISKKLDAMGIKTVL 204 AKL + K Q+ + E + L+ +L + ++ GIG + +K L+A+GI +V Sbjct: 206 AKLVSGVFKPNQQ------TVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVR 259 Query: 205 DLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 DL + + K + +R + GE + P Q SF ++ + Sbjct: 260 DLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPP-QSFSEEDSF-KKCSSEVEA 317 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP------TQ 317 + I A ++ + + + I+ ++ + Y S + + T Sbjct: 318 KNKIEELLASLLNRVCQDGRKPHTVRLIIR--RYSSEKHYGRESRQCPIPSHVIQKLGTG 375 Query: 318 DSRD---IINAATRSLDAIWQAGHRYQ--KAGVMLGDFF 351 + +++ + + + V + Sbjct: 376 NYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLK 414 >UniRef50_Q568P0 Zgc:110185 n=3 Tax=Clupeocephala RepID=Q568P0_DANRE Length = 710 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 70/394 (17%), Positives = 126/394 (31%), Gaps = 54/394 (13%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P L KP+ + ++ N A+ LGV + Sbjct: 38 VILHFDLDCFYAQVEMIRNPALRTKPLGI--QQKYIIVTSNYVARELGVNKLMSVTDAVE 95 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-- 118 + +V + Y +MS +V L P VE DE F D+T + R Sbjct: 96 KCPQLVLVKGE-DLTHYREMSYKVTELLMSYCPLVERLGFDENFMDVTEMVEKRIKETRI 154 Query: 119 -----------------------------FGREIRATVLQRTHLTVGVGIAQTKTLAKLA 149 E+R + LT G+A K LAKL Sbjct: 155 SDLSFNGHVYNHESVVVDEENIRLAVGSVIAAEMRQAIFSTLGLTGCAGVASNKLLAKLV 214 Query: 150 NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT 209 + + K Q+ L + S + V GIG + +KL A+G+ V DL Sbjct: 215 SGSFKPNQQT-----TLLPHSNAELMSSLTGLIKVPGIGYKTREKLKALGLVNVRDLQLY 269 Query: 210 DIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAIC 268 + + K F +R G + P Q + SF ++++ + + I Sbjct: 270 PLSDLVKEFGEMNAKRVQNLACGIDDSPVTPAGPP-QSLSDEDSF-KKMSTLEEVLKKIE 327 Query: 269 SYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT-------QDSRD 321 E++ + + + I+ N + S + T Sbjct: 328 ELLINLTERMHKDGRQPHTLRLTIRKYT-VTNRWFNRESRQCPIPNHTGLKITGGSSEAV 386 Query: 322 --IINAATRSLDAIWQAGHRYQ--KAGVMLGDFF 351 +++ + + + + V + Sbjct: 387 PQLLSLSMKLFHKMVDPHQPFHLTLLNVCFSNLQ 420 >UniRef50_Q6CIW8 KLLA0F23375p n=1 Tax=Kluyveromyces lactis RepID=Q6CIW8_KLULA Length = 829 Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats. Identities = 69/414 (16%), Positives = 124/414 (29%), Gaps = 45/414 (10%) Query: 1 MFALCDVNAFYASCETVFRP--DLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFK 57 ++ D + F+A D+ P+ + N+ + + N A++ GV G Sbjct: 215 VYFHIDFDCFFAQVSAKIDGKYDIHATPIAISHGINNSDISSCNYVARSFGVYNGMWVSS 274 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEA--FCDLTGVRNC 113 L + ++ Y +SN S L+++ V SIDEA +T Sbjct: 275 ALKLCP--DLKILDYEFDEYEAISNLFYSALKDIGIFKMVLPISIDEAIGCMLITPDITS 332 Query: 114 RDLTDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 LT ++R V T +V VG + LA+LA K ++ Sbjct: 333 ELLTQKCMQVRNAVYNVTQGYSVSVGCGPSVLLARLALRKGKPNGFHISWFDTVT---EC 389 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAM--GIKTVLDLADT-----DIRFIRKHFN-VVLER 224 + + D+ GIG K+ ++ + DL D ++ + K ++ Sbjct: 390 HAFIDHFKLKDLPGIGYSTDLKIKEQFGNVQNISDLRDLLERPSNVSKLIKVIGSKNTKK 449 Query: 225 TVRELRGEPCLQLEEFAP------TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 L G+ + K+ + ++ R + + A EKL Sbjct: 450 LQIYLDGKDDDESISMVKDPHTYFQKKSLSVEINYAIRFKTIDDVDIFLERLALHLWEKL 509 Query: 279 RSEHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 R + R I+ + F S L T TQ I + Sbjct: 510 RDSNLMTRQITLKLMKRAQGAPVDPPKFMGMGKCDALSKVSNLGTNTQKFGTIASECKTL 569 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 + + G+ SEQ D + Sbjct: 570 FRILSVPPEEVRGIGIQFHRLTDSNQ---------KVGQKSEQREITTDLFRKR 614 >UniRef50_B5J6A6 ImpB/MucB/SamB family n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J6A6_9RHOB Length = 465 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 83/410 (20%), Positives = 145/410 (35%), Gaps = 33/410 (8%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D ++F+AS E P L G+PV V+ + IA + EAKALGVK K ++ Sbjct: 29 LYLDFDSFFASAEQHLNPYLRGRPVGVVPLDSLHTSCIAVSREAKALGVKSRTTIIKARE 88 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + ++ + +++Y + R++ +E P + SIDE C+L V Sbjct: 89 IIP--DMIFVVARHDVYVRLHKRILDVIETCLPVTHVRSIDEVVCNLLRVEAAEG-EALA 145 Query: 121 REIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++ + LT +G+A T+ AK+A K L ++ Sbjct: 146 LRLKTAIALAFSDVLTCSIGMAPTELRAKIAAELNKPNG------FKLLPAADMPDALAE 199 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQL 237 + + D+ GI + +L A + L + R + V ER L G Sbjct: 200 VDLCDLPGISEGMQARLKAAQVHNFTALWALAPKQARAIWGSVEGERFWNGLHGY----H 255 Query: 238 EEFAPTKQEI-ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK--- 293 E PTK+ + SR + + +R A +LR + ++ + Sbjct: 256 TERPPTKKSMFGHSRVLPKDWRNPEKVRVCARLLIESAGRRLRRANMRATKLTLSFRGGG 315 Query: 294 -TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 S L D ++ + A + + VM+ Sbjct: 316 YRSAHESRRDDQNWGWEGNFLPARDDYAFLLALSDGLTWAEQHMAFQPRSVSVMIHGLIV 375 Query: 353 QGVAQLNLF----------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 +G +LF + A R E++ +MD + AK G L Sbjct: 376 EGEFMTDLFAASPDAASGMSEAASRAKWEKVSDLMDNMRAKFGPHALSLG 425 >UniRef50_Q6KZW2 DNA polymerase IV n=1 Tax=Picrophilus torridus RepID=DPO4_PICTO Length = 344 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 88/367 (23%), Positives = 149/367 (40%), Gaps = 29/367 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 M L D + F+A E + P L GKPVVV + G V N EA+ALG+K G P Sbjct: 1 MIMLIDFDYFFAQVEEINDPSLKGKPVVVSVYSGRNERSGAVATSNYEARALGIKSGMPL 60 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 ++ ++ + V + Y S+++M + E S ++EI SIDEA+ D+ G Sbjct: 61 YRALEI-GKNRAVFLPIRKDFYQKYSDKIMDIISEYSEKMEIASIDEAYIDIDGNDCKIG 119 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 EI+ +L T + V +GI K +AK+A AK + + + + Sbjct: 120 ---IANEIKNRILNETGIKVSIGIGINKVIAKMAAEMAKPNGIK------CISADETGEF 170 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 ++ + ++D+ GIG+ +SK L+ +GI+ + D+ + D+ I+ + EL Sbjct: 171 LNNIKINDIPGIGKVLSKNLNEIGIEYLRDIKNFDVNKIKSILGESKTNYLYELYENKYF 230 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 E K+ + E D + + A EK + IS Sbjct: 231 SPVE-PRVKKNFGRYLTLPENTRDIDKIVPYLKKSIDAAYEK---APGIPQEISVVAIME 286 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDFFSQG 354 + Y +A + DS +I A L+ I + ++ GV L Sbjct: 287 DLDIVSRSYTGNAIKR-----DDSINI---ALNLLNKIISEDNRNIRRIGVRLSKISKNN 338 Query: 355 VAQLNLF 361 + F Sbjct: 339 TL-DDFF 344 >UniRef50_B5X367 DNA polymerase iota n=1 Tax=Salmo salar RepID=B5X367_SALSA Length = 757 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 73/399 (18%), Positives = 137/399 (34%), Gaps = 58/399 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P L P+ + ++ N A+ LGV K+ Sbjct: 46 VILHFDLDCFYAQVEMIRNPALRNVPLGI--QQKYIIVTCNYVARDLGVTKLMLVTDAKE 103 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR------ 114 + +V + Y + S +V L P VE DE F D+T + R Sbjct: 104 KCPQLVLVKGE-DLTHYRETSYKVTELLMSFCPLVERLGFDENFMDITEMVERRMEQTPE 162 Query: 115 -------------DLTD--------------FGREIRATVLQRTHLTVGVGIAQTKTLAK 147 D +D E+RA + + LT GIA +K LAK Sbjct: 163 SAHYSYEGHVYSLDTSDAKVMVHPLLAVGSHIAAELRAEIHSKLGLTGCAGIATSKLLAK 222 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALP-VDDVWGIGRRISKKLDAMGIKTVLDL 206 L K Q+ T E + +M +L + V G+G + +K+L A+G+ V DL Sbjct: 223 LVAGTFKPNQQTTLL------PESVKDIMGSLNGLRKVPGVGHQTAKRLQALGLVGVQDL 276 Query: 207 ADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + + + F V +R G + Q + SF ++++ + Q Sbjct: 277 QLFPLADLVREFGVSTAQRLQNLALGIDDTPVTPTGAP-QSLSDEDSF-KKMSSTNEVWQ 334 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT--------- 316 + + +++ + + + I+ A N+ + S + Sbjct: 335 KVKDLLSSLLDRMHKDGRQPFTLRLTIRRYS-ATNKWFSRESRQCPIPNHIGQKITSGSC 393 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQ--KAGVMLGDFFSQ 353 ++ A + + + V + ++ Sbjct: 394 DALAQLVTMAMKLFHKMVATNTAFHLTLLNVCFSNLQAK 432 >UniRef50_P12689 DNA repair protein REV1 n=7 Tax=Saccharomyces cerevisiae RepID=REV1_YEAST Length = 985 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 71/424 (16%), Positives = 140/424 (33%), Gaps = 45/424 (10%) Query: 1 MFALCDVNAFYASCETVFRP------DLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGD 53 + D + F+A+ + R D P+VV + + N A++ G+K G Sbjct: 357 IIFHIDFDCFFATVAYLCRSSSFSACDFKRDPIVVCHGTKNSDIASCNYVARSYGIKNGM 416 Query: 54 PWFKQKDLFRRC-GVVCFSSNYELYADMSNRVMSTLEE--LSPRVEIYSIDEAFCD--LT 108 + + + ++ +E + S STL+ + + SIDEA C + Sbjct: 417 WVSQAEKMLPNGIKLISLPYTFEQFQLKSEAFYSTLKRLNIFNLILPISIDEAVCVRIIP 476 Query: 109 GVRNCRDL--TDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 + + EIR + Q T TV +G + + LA+LA AK + Sbjct: 477 DNIHNTNTLNARLCEEIRQEIFQGTNGCTVSIGCSDSLVLARLALKMAKPNGYNITFKSN 536 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDA--MGIKTVLDLA-DTDIRFIRKHFN-VV 221 LS + S+ +DD+ G+G +L++ ++ DL + ++ + Sbjct: 537 LS-----EEFWSSFKLDDLPGVGHSTLSRLESTFDSPHSLNDLRKRYTLDALKASVGSKL 591 Query: 222 LERTVRELRGEPCLQ------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + L+G+ + + ++ + ++G R + + I Sbjct: 592 GMKIHLALQGQDDEESLKILYDPKEVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLL 651 Query: 276 EKLRSEHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 EKL ++ I+ + + S S +L PT + I Sbjct: 652 EKLNEINKTTSQITLKLMRRCKDAPIEPPKYMGMGRCDSFSRSSRLGIPTNEFGIIATEM 711 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFS--QGVAQLNL---FDDNAPRPGSEQL-MTVMDTL 380 + + + QL L F E L V + + Sbjct: 712 KSLYRTLGCPPMELRGLALQFNKLVDVGPDNNQLKLRLPFKTIVTNRAFEALPEDVKNDI 771 Query: 381 NAKE 384 N + Sbjct: 772 NNEF 775 >UniRef50_C6VKK8 UV-damage repair protein n=17 Tax=Bacteria RepID=C6VKK8_LACPJ Length = 507 Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats. Identities = 74/495 (14%), Positives = 142/495 (28%), Gaps = 91/495 (18%) Query: 2 FALCDVNAFYASCETVFR-PDLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E V D +VV + +A + K GV F+ Sbjct: 7 YMAIDLKSFYASVECVAHQLDPLNANLVVADTSRTDKTICLAVSPALKQFGVPGRPRLFQ 66 Query: 58 QKD----------------------------LFRRCGV----VCFSSNYELYADMSNRVM 85 + L + + Y S + Sbjct: 67 VEQRVATLNRARGRQTSYQAVRRHRSIYRDQLLKHANLGIDYRVVPPRMSYYMQKSAAIY 126 Query: 86 STLEELS--PRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQ 141 + +YSIDE F D+T + + + + T +T GI Sbjct: 127 DIYLRFIKPEHIHVYSIDEVFMDVTDYLSTFQVSPHALAKTMIHEIQAETGITATAGIGA 186 Query: 142 TKTLAKLANHAA-KKWQRQTGGV--VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 LAK+A KK GV + + ++ L + P+ D W +G +K+L A+ Sbjct: 187 NLYLAKVAMDIVAKKIPADADGVRIAQMDEQQYRQYLWAHEPLTDFWRVGHGYAKRLAAL 246 Query: 199 GIKTVLDLADTD---------IRFIRKHFNVVLERTVRELRGEPC---LQLEEFAPTKQE 246 G+ T+ D+A + + F E + G+ ++ + ++ Sbjct: 247 GLNTMGDIARCSLGTLSDSHNEEQLYREFGKNAELLIDHAWGDESATIADIKNYHASEHG 306 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS----------- 295 I S+ Y + + +L + H + I Sbjct: 307 IYASQVLMRP-YTYTEGQAVLRGMVNNLTLELVARHVVTDQLGIRIDYDANASSVGTHYQ 365 Query: 296 -----PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 + + +V L + ++ A + + ++ VM Sbjct: 366 GAVTEDYYGRQVPKPAHTTVTLAQASASQHELGAAYQQLYQQVVNRQLMVRRVTVMANHL 425 Query: 351 FSQGVA-------QLNLFDDNA-----------PRPGSEQLMTVMDTLNAKEG-RGTLYF 391 + Q NLF++ R QL + L + G + + Sbjct: 426 VDEQQVRRQPRYQQTNLFENPEVAQAQERDAQRKRERDGQLQRAILKLQRRSGNKNVVIR 485 Query: 392 AGQGIQQQWQMKRAM 406 ++R Sbjct: 486 LADLKPSSTTIERNE 500 >UniRef50_D2RJB9 UMUC domain protein DNA-repair protein n=4 Tax=Bacteria RepID=D2RJB9_ACIFE Length = 493 Score = 254 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 84/482 (17%), Positives = 146/482 (30%), Gaps = 78/482 (16%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWF 56 ++ D+ +FYAS E V R D +VV + +A + KA G+ F Sbjct: 5 VYGAIDLKSFYASVECVERGLDPLDACLVVADRSRTDRTICLAVSPALKAWGIPGRPRLF 64 Query: 57 KQKDLFRRCG-------------------------------VVCFSSNYELYADMSNRVM 85 + + + + Y + S +V+ Sbjct: 65 EVIRQVEEMNALRRASLRGRSFTGRSYLASRLDRDKSLEVAYITAMPHMQRYMEKSAQVL 124 Query: 86 STLEELS--PRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQ 141 + + +YS+DE DLT RE+ VL+ T +T GI Sbjct: 125 QIYLQFMAPEDIHVYSVDEVLLDLTPYLKSGGWTPHGLVREMIRQVLRETGITATAGIGT 184 Query: 142 TKTLAKLANHAAKKW-QRQTGGVVD--LSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 L K+A K + GV L+ ++ L P+ D W IG I++KL Sbjct: 185 NLYLCKVAMDIVAKHMEPDPDGVRIAALTERTYRQLLWDHCPMTDFWRIGPGITRKLQQY 244 Query: 199 GIKTVLDLADT---DIRFIRKHFNVVLERTVRELRG-EPCL--QLEEFAPTKQEIICSRS 252 G+ T+ +A D + F V E + G EPC + + P + + Sbjct: 245 GMYTMGAVARMSLEDPDLLYHLFGVNAELLIDHAWGWEPCTLQDIRTYEPRSSSLGSGQV 304 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT------------------ 294 + T R + A A L +H+ + + Sbjct: 305 LQQPCT-AEKARLLVWEMADLLALDLTKKHRVTDQLVMTLGYDRCNLEDPERRRSYRGKV 363 Query: 295 -SPFALNEPYYGNSASVKLL-TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + S L T + I D I +K + + Sbjct: 364 TADHYGRPVPVHAHGSRNLPGGYTASGQVIRQETLALFDRIADPHLLIRKISLNAEHVRN 423 Query: 353 QGVA-----QLNLF----DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 + +LF R +QL + ++ ++ G+ L +Q + Sbjct: 424 PESLPVLRGETDLFVREPGPVYVRGREDQLQETILSIQSRYGKNVLLRGSNLLQGAMTRE 483 Query: 404 RA 405 R Sbjct: 484 RN 485 >UniRef50_C2EU55 UMUC domain protein DNA-repair protein n=3 Tax=Lactobacillus RepID=C2EU55_9LACO Length = 508 Score = 253 bits (648), Expect = 7e-66, Method: Composition-based stats. Identities = 76/495 (15%), Positives = 141/495 (28%), Gaps = 91/495 (18%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++ D+ +FYAS E + + +VV + +A + K GV + Sbjct: 7 IYMAIDLKSFYASVECIAHHLNPLNANLVVADRSRTNKTICLAVSPALKQFGVPGRPRLY 66 Query: 57 KQK----------------------------DLFRRCGVVC----FSSNYELYADMSNRV 84 + + L + + Y + S V Sbjct: 67 EVQQIVDRLNRERAKKATCHHLSKHSSIYRGKLLKSPNLRVGFRIVPPRMHFYMEKSAEV 126 Query: 85 MSTLEELS--PRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIA 140 + YSIDE D+T + ++I + T +T GI Sbjct: 127 YGIYLRFIKPENIHTYSIDEVMMDVTDYLHDHQVSPHTLAKQIIQQIQLETEITATAGIG 186 Query: 141 QTKTLAKLANHAAK---KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA 197 LAK+A R + ++ + +R L + P+ D W IGR +K+L+ Sbjct: 187 TNLYLAKVAMDIVAKRIPADRDGVRIAQMNEYQYRRYLWAHQPLTDFWRIGRGYAKRLEK 246 Query: 198 MGIKTVLDLADTD---------IRFIRKHFNVVLERTVRELRGEPC---LQLEEFAPTKQ 245 +G+ T+ D+A + + F E + G ++ + + Sbjct: 247 LGLHTMGDIARCSLGKLSDPLNEEILYREFGKNAELLIDHAWGHETATITDIKNYHSEEH 306 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS---------- 295 I S+ Y A A + H I Sbjct: 307 GIYSSQVLMRP-YKYHEGLAAAQGMVDSVALSMVKRHVVSADFGIVINYDPQSLQYAPNY 365 Query: 296 ------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 F + A KL PT ++ + + +K +++ Sbjct: 366 QGPVVEDFYGRRTAKPSHAHQKLDLPTASGSELRQIYKQLYEKCVNPNLLIRKITLIVTH 425 Query: 350 FFSQG-------VAQLNLFDDNAPRPGSEQ-----------LMTVMDTLNAKEG-RGTLY 390 + Q+NLF+D E+ L T + L K G + + Sbjct: 426 MIDEDIAAKTPHFKQVNLFEDPQREIKQERVAAIKRQRDQKLQTTILKLQQKLGNKNVVL 485 Query: 391 FAGQGIQQQWQMKRA 405 + +R Sbjct: 486 HLADLKKGSTTKERN 500 >UniRef50_A4YEC1 DNA polymerase IV n=18 Tax=Sulfolobaceae RepID=DPO4_METS5 Length = 349 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 140/362 (38%), Gaps = 27/362 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D + F+A E + P L GKPVVV + + G V N EA+ LG+K G P Sbjct: 2 IVLFVDFDYFFAQVEEILNPSLKGKPVVVCVYSGRTKDSGAVATSNYEARKLGIKAGMPI 61 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCR 114 K K++ + V E+Y +S RVM+ + ++EI SIDEA+ D+T V++ Sbjct: 62 IKAKEIGKDA--VFLPMRKEVYQQVSRRVMNIISGYGDKLEIASIDEAYLDITRRVKDFD 119 Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + + R+++A VL++ L V VGI K +AK+ K + + E + Sbjct: 120 EAKELARKLKAEVLEKERLRVTVGIGPNKVVAKIIADMNKPDG------LGIIYPEEVKD 173 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 + L + V G+G+ + L +GI + D+ + + + Sbjct: 174 FLYNLDISKVPGVGKITEEILRKVGINRLGDVINKSGELVNLVGKSKANYLLSLANNTYH 233 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 +E T + + E D + ++ A K+ ++ Sbjct: 234 DPVESREITHR--GRYVTLPENTRDLNRILPSLKRSIEEAYSKVDGIPMEIYVVAIM--- 288 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR-YQKAGVMLGDFFSQ 353 E S R + + A L+ I ++ R ++ GV LG Sbjct: 289 ------EDLDIVSKGKSFKFGVSQDRAL-SVAQELLNKILESDKRKLRRVGVRLGKITKS 341 Query: 354 GV 355 Sbjct: 342 ST 343 >UniRef50_Q759A8 ADR369Cp n=1 Tax=Eremothecium gossypii RepID=Q759A8_ASHGO Length = 827 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 73/388 (18%), Positives = 128/388 (32%), Gaps = 34/388 (8%) Query: 2 FALCDVNAFYASCETVF--RPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQ 58 D + F+A+ + P P+ V V + N A+ G++ G K Sbjct: 201 VLHVDFDCFFATISGIKAGYPSKAEVPLAVCHGGSSSDVASCNYAARECGIQNGMWVSKA 260 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCRDL 116 K+L + +VC Y+ Y +SN LE L V S+DEA C + + Sbjct: 261 KNLCPQ--LVCLPYTYDEYETISNAFYEVLEGLKAFDAVYPISVDEAVCVIDMPLDTLSC 318 Query: 117 TDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER---- 171 + IR+ V +RT +V VG A + LA+LA AK + + Sbjct: 319 QNLCIRIRSEVAERTGGCSVSVGCAPSLVLARLALKRAKPDGYLVCTKESIKGGDTQVVS 378 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGI----KTVLDLADT-DIRFIRKHFN-VVLERT 225 L + D+ G+GR I++KL +G T+ ++ + + + Sbjct: 379 PAHLFETCALRDLPGVGRAIAEKL-LLGSTGHEHTIAQVSQLFSRSELIARLGSITGAKL 437 Query: 226 VRELRGEPCLQLEEF------APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 +G ++ ++ + ++G R P + + KL Sbjct: 438 ADLFQGLDDVESSRMLCNPRAYFARKSLSVEINWGIRFDAVPEVDAFLDRLVQYLVGKLN 497 Query: 280 SEHQYCRFISTFI-KTSPFALNEP--------YYGNSASVKLLTPTQDSRDIINAATRSL 330 I I + S A EP S S +L T I + Sbjct: 498 ELRMTTSHIVLKIARRSRDAPIEPPKYLGMGDCDSYSKSCRLGLATNIPGVISAEIKAAF 557 Query: 331 DAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + + V ++Q+ Sbjct: 558 RMLCCPAKELRGIAVQFLKLKEASISQM 585 >UniRef50_D1R481 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R481_9CHLA Length = 271 Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 114/280 (40%), Gaps = 15/280 (5%) Query: 85 MSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DFGREIRATVLQRTHLTVGVGIAQT 142 M L S VE+ SIDEA+ D++ +++ ++T +GR+++ VL+ T LT VGIA Sbjct: 1 MDILSRHSSLVEVVSIDEAYMDVSFLKDDPEMTAKQYGRKLKEAVLKNTGLTCSVGIASN 60 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 K +AK+A+ AK + ++ LP+ + GIG + K L + T Sbjct: 61 KLIAKIASSRAKPNGLYE------IPSGEEAAFLATLPIGAIPGIGSKTEKSLIDDRLYT 114 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 + DL D+ + + + G ++ + I +F + D Sbjct: 115 IADLQKIDLDTLIERYGTRGYYFYLAAHGIDKRPVDGEEYFPKSIGAETTFEADLADSTI 174 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + + + +A ++L+ R S ++ S F + S L + TQD + I Sbjct: 175 LLETLSELVQKACKRLKKYQTRTRGFSLKLRYSDFR------TVTRSRLLFSHTQDEQTI 228 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 A + + G+ L S G Q L++ Sbjct: 229 WEEARDFFLKVHTKDVPLRLIGISLEKL-SDGYWQPTLWN 267 >UniRef50_UPI0000DB6FEF PREDICTED: similar to DNApol- CG7602-PA, isoform A n=1 Tax=Apis mellifera RepID=UPI0000DB6FEF Length = 540 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 72/407 (17%), Positives = 128/407 (31%), Gaps = 64/407 (15%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 DV+ FYA E + P+L KP+ V V+ N A+ G+K + L Sbjct: 16 IIHIDVDCFYAQVEMLRHPELENKPLGV--QQKNMVVTSNYIAREYGIKKCMSVQEALRL 73 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR---------- 111 +V + Y S +++ L + +P VE D+ F D+T + Sbjct: 74 CPGLALVNGE-DLTNYRHFSTKILEILHQFTPLVERLGFDDNFMDVTSIVQKYMNSGNNS 132 Query: 112 -------------------------------NCRDLTDFGREIRATVLQRTHLTVGVGIA 140 + EIR + + H+T GIA Sbjct: 133 ELNINISMEDENPVGEIFGASEEECPCGCHARLIIASKIAAEIRERIYKDLHVTCSAGIA 192 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLDAMG 199 K LAKL K Q+ L L+S + V + G+G++ ++ L + Sbjct: 193 HNKLLAKLVGSLHKPNQQ------TLIFPCSAPMLLSNIGSVSKIPGVGQKTTQLLMSNN 246 Query: 200 IKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 IKT+ DL T + + + L R G ++ KQ I F + ++ Sbjct: 247 IKTIDDLRKTSLETLEMKIGIDLARKLKDNAEGIDETVVKPT-GKKQSIGLEDGF-KSVS 304 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP--- 315 + + + R E + + + ++ F + + L Sbjct: 305 LVAEVESRLGALLRRLTELAMEDGRIPVAMRLTVRKHDFNKSSSGKRETRQCALPKHLLP 364 Query: 316 -----TQDSRDIINAATRSLDAIWQAGHRYQ--KAGVMLGDFFSQGV 355 D ++ A + + GV F + Sbjct: 365 SSKSGVYDHAKMLTLAMKLFHRTVDVSKPFHLTLLGVAFTKFEERSS 411 >UniRef50_B7GU73 UMUC domain protein DNA-repair protein n=32 Tax=Bacteria RepID=B7GU73_BIFLI Length = 548 Score = 249 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 87/529 (16%), Positives = 146/529 (27%), Gaps = 125/529 (23%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E R D +VV +A + K G+ F+ Sbjct: 14 YIAIDLKSFYASVECAARGLDPLTTHLVVADETRTDKTICLAVSPSLKNYGIPGRARLFE 73 Query: 58 QKDL---------------------FRRCGV----------VCFSSNYELYADMSNRVMS 86 K + V Y ++S +V Sbjct: 74 VKQRLNGVNIERAVHAPGGRLIGESCDARDLERSPRLKASMVIAKPRMAHYLEVSGQVYG 133 Query: 87 TLEELS--PRVEIYSIDEAFCDLTGVRNC--RDLTDFGREIRATVLQRTHLTVGVGIAQT 142 + + + +YSIDE F D+T R I +L T +T GI Sbjct: 134 IYLKYAAPEHIHVYSIDEVFIDVTPYLRSLGMGPHAMARTIVREILDETGITATAGIGSN 193 Query: 143 KTLAKLANHAAKKWQR---QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 LAK+A K + +L + +R L + P+ D W +GR ++KL+ G Sbjct: 194 MYLAKVAMDIVAKHMPADRDGVRIAELDEMSYRRLLWNHRPLTDFWRVGRGYARKLERAG 253 Query: 200 IKTVLDLADTD---------IRFIRKHFNVVLERTVRELRG-EPCL--QLEEFAPTKQEI 247 + T+ D+A + + F V E + G EPC + + P I Sbjct: 254 LTTMGDIARCSVGRASDYYNEDLLYRMFGVNAELLIDHAWGWEPCEIADIRSYEPGAHSI 313 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS------------ 295 + D+ + R A A L + ++ + Sbjct: 314 SSGQVLTGP-ADWHTARLIAKEMADALALDLVDKGVMTNRLTLAVGYDIGSLDASKLDSC 372 Query: 296 --------------PFALNEPYYGNSA--------SVKLLTPTQDSRDIINAATRSLDAI 333 + S+ L T + I A T + I Sbjct: 373 ADRAMRRAAERAAKTYQGPVTVDRFGRRVPKSAVGSIGLGDFTSSAARIREAMTMLYERI 432 Query: 334 WQAGHRYQKAGVMLGDF-FSQG------VAQLNLFDDN---------------------- 364 A ++ V+ D + QL+LF D+ Sbjct: 433 VDARLLVRRLTVVADDVATPKELAAGKRYEQLDLFGDDGDMRYDCDSTESGGDGSGRMPA 492 Query: 365 -------APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 + + + K GR + A R Sbjct: 493 CGDDAAAQTLAREHDIQRALLDVKRKFGRNAVIKAMDMEDGATGQDRNR 541 >UniRef50_A8ZS28 DNA-directed DNA polymerase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS28_DESOH Length = 401 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 72/400 (18%), Positives = 123/400 (30%), Gaps = 26/400 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 +V F + E L +PV++ V + EA A G++ G P Sbjct: 10 IIHINVAHFAVTVEQTLDARLRDRPVLIAPAGAARTPVYDMSQEAFASGIRKGMPVAGAL 69 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSID-EAFCDLTGVRNCRDLT- 117 R C VV Y + +P VE S D F D+TG Sbjct: 70 KACRDCKVVPLYP--ARYERAMQTIAKYAGAYTPVVEQGSGDGHLFLDVTGTSRLFGPPP 127 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D + + + L +A K +AK+A K + + + Sbjct: 128 DIAWRLERQIKKDFGLAPAWSVAANKLVAKVATRLVKPVGEY------IVCPGDEAPFLE 181 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LP+ + G+ R I V L + ++ F+ + +RG + Sbjct: 182 PLPLGILPGVERSDLDAFAMYHIGRVNQLRPWSLAQLQVAFDTRAQFLFDTIRGIDLSAV 241 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + F E M Q + + LR+ ++ R + S Sbjct: 242 TSGREKEPTVAMEHEFSEDTNQRDQMEQVLYGLVEKGGRALRARQRFARIAGVVVDYSDG 301 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATR---SLDAIWQAGHRYQKAGVMLGDFFSQG 354 + V + PT + + AA R + L Sbjct: 302 RRC------ARQVSIAPPTANDPALFEAARRALSLAVVRRVRVRYIRLV---LRRLLFP- 351 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 QL+LFD + + +L+T MD + +K G +Y Sbjct: 352 PVQLDLFD-HDRQERQTRLLTAMDNIRSKFGDSAIYPGRM 390 >UniRef50_Q5JLR9 Os01g0757800 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q5JLR9_ORYSJ Length = 642 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 73/425 (17%), Positives = 141/425 (33%), Gaps = 81/425 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E P+L G+P V+ ND G +IA + EA+ GVK + Sbjct: 13 VIAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K + +V ++ +Y + V++ L + E SIDE + DLT Sbjct: 73 AKMVCPSINLVQVPVARDKADLNVYRSAGSEVVTILSTKG-KCERASIDEVYLDLTDAAK 131 Query: 113 ---CRDLTD-------------------------------------------------FG 120 + Sbjct: 132 EMLLESPPELLELIFEEATKSNILGLPSDVSNREDSVRAWLCRADADYQDKLLSCGAIIV 191 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++R VL+ T T GIA K LAKL + K Q+ + + + +LP Sbjct: 192 AQLRVKVLEETQFTCSAGIAHNKMLAKLVSGMHKPAQQ------TVVPSSAVQDFLVSLP 245 Query: 181 VDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 + + +G ++ L +G+ TV DL +++++ V + RG ++E Sbjct: 246 IKKMKQLGGKLGSSLQDDLGVNTVGDLLSFTEDKLQEYYGVNTGTWLWKIARGISGEEVE 305 Query: 239 EFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEK----LRSEHQYCRFISTFI 292 + + C ++F + + S++ + +E+ L + + ++ + Sbjct: 306 D-RLLPKSHGCGKTFPGPKALKNNASVKTWLDRLCEELSERIQSDLNQNKRIAQTLTLYA 364 Query: 293 KTSPFALNEPYYGN-SASVKLLTPT----QDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + ++ S S L T +D+ + + V Sbjct: 365 RACKKNKSDSIKKFPSKSCPLRYGTVKIQEDAMKLFESGLHDFLGSQNTKWSITSLSVSA 424 Query: 348 GDFFS 352 F Sbjct: 425 SKIFD 429 >UniRef50_C2KWD3 ImpB/MucB/SamB family DNA-damage repair protein n=2 Tax=Bacteria RepID=C2KWD3_9FIRM Length = 562 Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats. Identities = 83/490 (16%), Positives = 136/490 (27%), Gaps = 86/490 (17%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYASCE R D +VV +A + KA GV F+ Sbjct: 39 YMAIDLKSFYASCECRERGLDPMDAYLVVADGERTEKTICLAVSPALKAYGVPGRARLFE 98 Query: 58 QKDLFRR-------------------------------CGVVCFSSNYELYADMSNRVMS 86 + R+ + LY S RV Sbjct: 99 VVEKVRKINYQRSKLYGGQPLVGKSCFDSDCKAYPFLAVNYITAPPRMALYMAYSRRVYE 158 Query: 87 TLEELS--PRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQT 142 E + +YS+DE F DL EI V + + VG+ + Sbjct: 159 VYLEFVSKEDIHVYSVDEVFMDLKPYERIYQKSSRVLAEEICRRVYEEVGMIATVGLGEN 218 Query: 143 KTLAKLANHAAKKWQRQT---GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 LAK+A K + + + L+ + L P+ D W IGR I +L G Sbjct: 219 LYLAKVAMDIEAKHMQASKEGIRLAMLTEQSYRESLWQHKPLHDFWRIGRGIENRLAHYG 278 Query: 200 IKTVLDLA---------DTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF---APTKQEI 247 I T+ D+A + + K F + E + G ++E+ + Sbjct: 279 IYTMGDIAMAALSGSKEKKNQALLYKLFGIQAELLIDHAFGYETCRIEDIKAFHSKSNSL 338 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS------------ 295 + + R A A L + + F+ ++ Sbjct: 339 HSGQVLPSP-YGFSEGRMVAEEMAEDLALDLLKKGKDSAFVQLYLSFDEENAGESYEGNL 397 Query: 296 --PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 + R A D I R +K + D Sbjct: 398 VQNHYGKRVPKSVHGLYHFPKRSNQGRAFREAVLAIYDRIMDRRLRIRKLSISAEDVRDC 457 Query: 354 GVA---QLNLF--------------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 QL+LF + E+ + K G+ L Q + Sbjct: 458 EALPEGQLDLFQHFLTSAEEEQELTERVQFLEKEEKARGAALAVMEKFGKNALLKGYQYL 517 Query: 397 QQQWQMKRAM 406 + +R Sbjct: 518 EGARGRERNR 527 >UniRef50_A5BB36 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BB36_VITVI Length = 500 Score = 246 bits (630), Expect = 9e-64, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 14/234 (5%) Query: 9 AFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 AF + P+L KPV V +N+ + + N A+ GVK G K L Sbjct: 257 AFLSPVVIRXNPELQDKPVAVCHSNNPKGTAEISSANYPARDYGVKAGIFVRDAKALCPH 316 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIR 124 +V F N+E Y +++++ + L + +V+ S DEAF ++ + D IR Sbjct: 317 --LVIFPYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEVMDSK-XGDPELLASIIR 373 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 + + T T GIA +A+LA +AK + +++ + LP+ + Sbjct: 374 KEIFETTGCTASAGIAGNLLMARLATRSAKPNGQCY------IPVDKVDDYLHQLPIKAL 427 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQL 237 GIG + +KL + T L +++ F + RG + Sbjct: 428 PGIGHVLEEKLRRRKVHTCGQLRMISKESLQRDFGTKTGDMLWNYCRGVDNRVV 481 >UniRef50_UPI0000D5778B PREDICTED: similar to DNA polymerase eta n=1 Tax=Tribolium castaneum RepID=UPI0000D5778B Length = 679 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 83/439 (18%), Positives = 147/439 (33%), Gaps = 76/439 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY E P L GKP+ V+ N G +IA N A+ GV F+ Sbjct: 7 VVVLVDMDCFYCQVEEKLNPALEGKPIAVVQYNAWQGGGIIAVNYPARDEGVTRHMRGFE 66 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K +V ++ Y D RV L +P ++ S+DEA+ D+T + Sbjct: 67 AKKKCPSINLVQVPELRGKADLTKYRDAGKRVADVLLTFTPLLQRASVDEAYLDITEIVE 126 Query: 113 CR---------------------DLTDF-----------------------GREIRATVL 128 R +L DF EIR V Sbjct: 127 KRIEKGLDDLTLINLSNTFVVGCELEDFLHNAITNKEYSIPNLKLAVGGLVTEEIRREVF 186 Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG 188 + T GIA K LAKL K ++ + E K P++ V +G Sbjct: 187 KVTGYKCSAGIAHNKILAKLVCSLHKPNKQ------TILPQEEVEKFFETTPINKVKNLG 240 Query: 189 RRISKKL-DAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQE 246 + + L + + T+ LA + + + ++ RG + + Sbjct: 241 GKFGQTLSEDFHVTTMGQLAKIPEKLLVQKYDEKTGNWLHNIARGIDMEPV-TTKLIAKS 299 Query: 247 IICSRSFG--ERITDYPSMRQAICSYAARAAEK----LRSEHQYCRFISTFIKTSPFALN 300 I C ++F + +++ + AA +E+ L+ ++ + I FA Sbjct: 300 IACCKNFPGKTALVTEENVQHWLGKLAAEMSERLDKDLKENNRRAKQIIVS-----FAQE 354 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG---HRYQKAGVMLGDFFS-QGVA 356 ++ + + + I AA + + + + G+ F + V Sbjct: 355 VNKKDVHSTRTHPLVSYNEQKIAQAAFEVVKRFCRKSDGTYHLKFLGLNASSFDDIKNVR 414 Query: 357 QLNLFDDNAPRPGSEQLMT 375 Q+ F P + L Sbjct: 415 QITSFFQVGPNQPKKSLEK 433 >UniRef50_D0MYB5 DNA polymerase kappa, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MYB5_PHYIN Length = 601 Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats. Identities = 67/296 (22%), Positives = 111/296 (37%), Gaps = 44/296 (14%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ E P L P+ V G + N A+ GV+ P F K+L Sbjct: 86 IVVVDMDMFYAAVEMRDDPKLRDVPLAVGGL--GMISTTNYAARQFGVRAAMPGFIGKEL 143 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV----------- 110 + N + YA ++ + + E P E +S+DEA DLT Sbjct: 144 CP--DLHFVPVNMKKYAGVAAEIRAVFAEYDPDFEAFSLDEACLDLTDYIAENWQKYISD 201 Query: 111 ------RNCRDLTDFG--------------REIRATVLQRTHLTVGVGIAQTKTLAKLAN 150 D ++ RE+R V T LT GIA LAK+ + Sbjct: 202 AMDEIESKESDKEEWASTASGRAAIAAVVVRELRKKVFDCTQLTASAGIAVNSMLAKICS 261 Query: 151 HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADT 209 K + V + ER + LPV + GIG+ + K L+ A+ ++T DL D Sbjct: 262 DMNKPNGQY----VLPFSRERVMTFIRELPVRKIGGIGKVMEKTLNEALDVQTGGDLFDQ 317 Query: 210 DIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + ++ G + ++ R+F +R++D + + Sbjct: 318 RGKIAHLFSGKTAMWLLQTSLGVQERR---EKQERKSFSRERTF-KRLSDPKQLEE 369 >UniRef50_UPI0000E48503 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48503 Length = 642 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 78/414 (18%), Positives = 138/414 (33%), Gaps = 58/414 (14%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++ FYA E + P L KP+ + V+ N A+A GV + Sbjct: 67 IVHIDLDCFYAQVEMLRNPTLRDKPLGI--QQKNIVVTTNYVARARGVSKLSYIKEALIK 124 Query: 62 FRRCGVVCFSS-NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--- 117 +V S + Y + S +V LE+ P VE DE F D+T + R + Sbjct: 125 CP--DLVLVSGEDLTNYRETSTKVTELLEQFCPLVERLGFDENFMDVTKLVESRLTSTDS 182 Query: 118 --------------------------------DFGREIRATVLQRTHLTVGVGIAQTKTL 145 +E+R T+ + LT G+A K L Sbjct: 183 KKLVHIGHSYESDAQIATQCQCGCRDRLTMGSHIAKEMRDTLKSKLGLTSCAGVATNKLL 242 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA-LPVDDVWGIGRRISKKLDAMGIKTVL 204 AKL K + + E + + + GIG KKL MGI+ + Sbjct: 243 AKLVGAHHKPNDQ------TVLFSEWTDSFIQTFTKLRQIPGIGHSSGKKLKGMGIQNLE 296 Query: 205 DLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 +L T + + F E +R G + P Q + SF +++ P+ Sbjct: 297 ELRPTPVSTLADQFGKQQAETMLRLAHGVDDTPVVSKGPP-QSLSDEDSF-KKVGTLPAA 354 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIK-TSPFALNEPYYGNSASVKLLTPTQDS--- 319 ++ + ++L+S+ + + ++ P + + S L D Sbjct: 355 KEMMTGLIKNLIKRLQSDGRTPYTMRLTVRKYVPGSWHRESRQTGISPNLFQKHDDPSFL 414 Query: 320 RDIINAATRSLDAIWQAGHRYQ--KAGVMLGDFFSQ--GVAQLNLFDDNAPRPG 369 ++ A L + + + + S+ A + F A +P Sbjct: 415 EQLLEVAVGLLQKLIDTNRPFHLTLINICFTNLRSKVTKGAIDSFFSKPAVKPK 468 >UniRef50_A7SBP1 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7SBP1_NEMVE Length = 403 Score = 245 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 76/405 (18%), Positives = 136/405 (33%), Gaps = 61/405 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P L +PV V + ++ N A+A+G+K + K Sbjct: 4 VIVHIDIDCFYAQVEMIRNPCLRDRPVGV--SQKHILVTCNYVARAMGLKKLISLAEAKK 61 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV---------- 110 V+ + Y + S+RV L + RVE +DE + D++ + Sbjct: 62 KCPDL-VIINGEDLTKYREFSSRVTKLLRRFALRVERLGLDENYVDVSELVQERMKHAPR 120 Query: 111 ----------------------------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 + E+R + LT GIA Sbjct: 121 GSYIAVGCIYGDNILKGSSNEVCPCGCHERLTVGSVIASELRKAIFDEIGLTTCAGIAHN 180 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 K LAK+A K ++ L ER LM LPV V GIGR +L ++GI T Sbjct: 181 KLLAKIAGEQNKPNKQ------TLLYTERVEGLMGLLPVRKVPGIGRSTCARLGSLGITT 234 Query: 203 VLDLADTDIRFIRKHFNVVLERTVREL-RGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 + +L + + + FN R + L G Q+ + + I S+ + Sbjct: 235 IAELQECSKKALLNEFNSQEVRILHALSHGADDSQVSTDSMP-KSISEEDSYS-NLCSLE 292 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL------TP 315 S++ + ++ + + + + I+ Y S + TP Sbjct: 293 SVKTNLRVLIGNLIPRITEDTGHPQTVRLAIRRG-GQAPGVYKKESRQCPVPDRFAMNTP 351 Query: 316 TQDSR--DIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVA 356 + + + + + V L +F + Sbjct: 352 NSSEKINVLFGTVFGLFHKLVDVSKSFQVRVLNVCLSNFQRRPER 396 >UniRef50_B8C7E7 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8C7E7_THAPS Length = 444 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 69/316 (21%), Positives = 117/316 (37%), Gaps = 21/316 (6%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 D++ F+ SC + P L P V + N A+ GV+ P + L + Sbjct: 141 IDMDGFFISCHILSLPHLAHIPACVGGT--SMISTSNYAARKYGVRAAMPGYLGSTLVKE 198 Query: 65 C-----GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLT 117 + S+++LY S V + LEE P + +YS+DEA+ D+ Sbjct: 199 LSGGKETLTFVKSDFDLYKRKSGEVRAVLEEYDPNLSMYSLDEAYMDIGPYLKILLSTAQ 258 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 IR V T LT G+A LAK+A+ K + G S+ + Sbjct: 259 QLLNSIRQRVKNATGLTCSAGLASNFLLAKVASDVNKPNGQCFVG----SSEAEILAFAN 314 Query: 178 ALPVDDVWGIGRRISKKLDAM-GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 L + + GIGR K L + ++TV DL D +R G Sbjct: 315 PLSIRKISGIGRVTEKMLRGVCEVETVKDLYDHRAEVYFLFKPASANLMMRASIGYAETG 374 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 A T++ I R+F + + + + + L+ + + I+ +K + Sbjct: 375 KHHEATTRKGISHERTFS-PTSSWSDLCNKLETIVQALVHDLKQRNLKPKTITLKVKLAN 433 Query: 297 FALNEPYYGNSASVKL 312 F + + +V L Sbjct: 434 FDI------LTRAVTL 443 >UniRef50_Q3A3S4 Nucleotidyltransferase/DNA polymerase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A3S4_PELCD Length = 393 Score = 244 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 69/401 (17%), Positives = 130/401 (32%), Gaps = 28/401 (6%) Query: 2 FALC---DVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWF 56 D + + P L +P+ V + + +AEA++ GV+ G + Sbjct: 5 ILHVAVPDFD---VALARAADPGLESRPLAVATGVSERALLRCVSAEARSDGVQPGMSVY 61 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + + EL + SP E S F DLTG R Sbjct: 62 VARKCCPALHL--LPPQAELAQRATRVFGELAACCSPLWEPGSPGRFFIDLTGSRRLLGA 119 Query: 117 T-DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 T D + +++R L+ G+A K +A++A G+ D+ Sbjct: 120 TLDVAARLERDIVERLRLSATCGMAGNKLVARIAADYL-----HRPGICDVLRGSE-SCF 173 Query: 176 MSALPVDDVWGIGR-RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 + L V + G+G R + L + ++ + +A + + + RG Sbjct: 174 IGPLTVSTLPGVGSVRTGRLLADLNLRRIEQVAALSVAQLEPVCGPFAALLQQRARGIDP 233 Query: 235 LQLEEFAPTKQE-IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + P + II D ++R A+ A +LR + + ++ Sbjct: 234 SPVCP--PRRSSAIIEETVLPRADNDDMAVRAALGRLAESCGLRLRELGRGTTCLRLQVR 291 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 E +A ++++AA L WQ R + + Sbjct: 292 YVDGLSEERTDSFTAPRAFD------LELMHAADHLLQRTWQRRVRLRALRLGCDRLAPL 345 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 QL+LF + L T +D L + G ++ + Sbjct: 346 T-RQLDLFAATQQSNDEQALQTALDRLRRQFGHESIQWGRN 385 >UniRef50_UPI0000397F7C COG0389: Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Actinobacillus pleuropneumoniae serovar 1 str. 4074 RepID=UPI0000397F7C Length = 278 Score = 243 bits (622), Expect = 7e-63, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 110/297 (37%), Gaps = 27/297 (9%) Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFGREIRATVLQRTH 132 LY +S ++ + VE+ S+DEA+ D+T R C T +EIR + H Sbjct: 1 MPLYKAVSEQIHQIFRRYTDIVELLSLDEAYLDVTDCRQCSGSATWIAQEIRDAIWNELH 60 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 LT GIA K LAK+A+ K + + + E + LP+ + +G+ + Sbjct: 61 LTASAGIAPLKFLAKIASDQNKPNGQF------VISPENMTAFIYDLPLKKIPRVGKVTN 114 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 +KL +G+ T D+ +D FI K F +R ++E P ++ + + Sbjct: 115 EKLAQLGLHTCGDIQHSDKAFIYKTFGKFGQRLWEFSHAIDNRKIEANRP-RKSLAVENT 173 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSE-----HQYCRFISTFIKTSPFALNEPYYGNS 307 I Q + + +L+ Q + ++ +K F Sbjct: 174 LPTDIWHLAEAEQIVDELFKKLVFRLQRNWGERSLQEFKKLAIKLKFGDFT--------- 224 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQA--GHRYQKAGVMLGDFFSQGVAQLNLFD 362 L T L +WQ + G+ + + QLNL++ Sbjct: 225 -QTTLERTTDGLS--RERFIELLQQVWQRTNRRSVRLIGLSVHYPTEKVKKQLNLWE 278 >UniRef50_P34409 DNA polymerase kappa n=6 Tax=Chromadorea RepID=POLK_CAEEL Length = 503 Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats. Identities = 83/412 (20%), Positives = 134/412 (32%), Gaps = 76/412 (18%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D++A++A+ E P L P+ V S+ + N A+ GV+ G P F L Sbjct: 86 VCIDMDAYFAAVEMRDNPALRTVPMAVGSS--AMLSTSNYLARRFGVRAGMPGFISNKLC 143 Query: 63 RRCGVVCFSSNYELY----ADMSNRVM------------STLEELSPRV----------- 95 + NY Y S M +L+ V Sbjct: 144 PS--LTIVPGNYPKYTKVSRQFSQIFMEYDSDVGMMSLDEAFIDLTDYVASNTEKKTFKR 201 Query: 96 ---------------------EIYSIDEAFC---------DLTGVRNCRDLTDFGREIRA 125 E I+E+ C V + REIR Sbjct: 202 HRFGGDCPCWLPRFDENENTLEDLKIEESICPKCEKSRKIYYDHVEFGTGREEAVREIRF 261 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 V Q T LT GIA LAK+ + K + V ++ + + LP+ V Sbjct: 262 RVEQLTGLTCSAGIASNFMLAKICSDLNKPNGQY----VLENDKNAIMEFLKDLPIRKVG 317 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ 245 GIGR +L AM I+TV D+ + + E +R G P E P ++ Sbjct: 318 GIGRVCEAQLKAMDIQTVGDMNLKKNLYPLCFTPLSQESFLRTALGLPGRP-SESDPRRK 376 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY-CRFISTFIKTSPFALNEPYY 304 I R+F +D+ + + E +R + ++ +K S F + Sbjct: 377 SISVERTFS-PTSDFNILLEEHQEICRMLEEDVRKSGIVGGKTVTLKLKLSSFDV----- 430 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + S+ + DI + L+ + G + GV L + Sbjct: 431 -LTRSLTPSDVVKSLEDIQKFSLELLEK--EKGKEIRLLGVRLSQLIFEEDE 479 >UniRef50_C6DZL5 DNA-directed DNA polymerase n=3 Tax=Geobacter RepID=C6DZL5_GEOSM Length = 417 Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 75/423 (17%), Positives = 139/423 (32%), Gaps = 36/423 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 V AF + V +L G+PV V + + +AEA A GV G P + + Sbjct: 5 ILHITVPAFAIALARVVDSNLRGRPVAVAPLNSERALLQCISAEAAAEGVHAGTPIYHAR 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 ++ + + L A S ++ E +P VE + AF DLT R D Sbjct: 65 KSCP--ALIVIAPDPHLMAKGSQALLDLSAEFTPIVEPGA-GRAFLDLTASRRLFGSARD 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + + R L G K ++++A Q GV D+ +R ++ Sbjct: 122 VAARLEKAIANRMGLEAMAGAGVNKLVSRVAADVM-----QEPGVYDVF-HGAERSFLAP 175 Query: 179 LPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 PV + G+G L + ++ V +A + +R RG + Sbjct: 176 FPVSVLPGVGESRQALLFRDLNLQRVEQVASLSVPQLRLAVGPFAPLLHDRSRGIDRSPV 235 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + EI+ + D + + A +LR + R ++ + + Sbjct: 236 QPPRLST-EIVEEGLLDQEENDDAILLSELLRLAEACGLRLRRLRKGARKLTLSVMYADG 294 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG-DFFSQGVA 356 + L PT ++ A + R + G+ L D ++ Sbjct: 295 VSQQGKKV------LPVPTSLDLPLLAAVEDLFFTTCKRRQRVK--GLRLSCDQVAEEAG 346 Query: 357 QLNLFDDNAPR--PGSEQLMTVMDTLNAKEGRGTLYFA-----------GQGIQQQWQMK 403 Q++LF + L +D L K G+ + + W + Sbjct: 347 QMDLFAPVTAQVSQKQADLQETLDLLREKHGQDAVRWGKGLAARREATLASEPPPTWDPE 406 Query: 404 RAM 406 + Sbjct: 407 QNK 409 >UniRef50_Q4AAV0 DNA polymerase IV n=5 Tax=Mycoplasma hyopneumoniae RepID=Q4AAV0_MYCHJ Length = 385 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 77/396 (19%), Positives = 157/396 (39%), Gaps = 27/396 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-GCVIARNAEAKALGVKMGDPWFKQK 59 + A D++ F+ S E P L G+P+V+ + D ++ + E K+ G K+ D + K Sbjct: 4 IIAHIDIDNFFVSSELKLNPKLKGQPIVISRSEDFAMAVSVSKEVKSKGFKISDKINEIK 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGV-RNCRDLT 117 ++ N Y +S++ + + + S ++E+YSIDE F DLT R + +T Sbjct: 64 KKIP--NLLVIHPNINYYKFLSDQFFNFISKNFSKKIEVYSIDECFIDLTEYSRKFKSIT 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D I+ +++ L + +G++ K LAK+A + AK G++ +S + + + Sbjct: 122 DMLYFIKNKLVKNFRLPISIGLSYNKLLAKMATNLAK---NSEAGIMQVSTKKDVKAFIY 178 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADT--DIRFIRKHFNVVLERTVRELRGEPCL 235 + +++GIG + ++KL GI T+ D + I + V L Sbjct: 179 PQKIGNLFGIGIQNTEKLKKFGIITIQDFIQKGVNNEKIIEILGVNRYYFFHALTKIGDD 238 Query: 236 QLEEFAPTKQEIICSRSFGERI-TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + + R+ I + + + EKL+ ++ + F K Sbjct: 239 NVCDKLEKFKSVSHFRTLSGDILLTKKQILDGVSEFLLELVEKLKKFNKAANRVEFFFKL 298 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + S P+ D + ++ I G+ L Sbjct: 299 KNKEKDHFFSDIS------FPSNDYDFLYQNLLALVEKIENFSL-IHGFGITLSKISDYD 351 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 + LN + ++ ++ +N K G L+ Sbjct: 352 KSMLN---------TNPKVKNIVAKVNKKIGLKKLF 378 >UniRef50_Q6FV13 Similar to uniprot|P12689 Saccharomyces cerevisiae YOR346w REV1 DNA repair protein n=2 Tax=Eukaryota RepID=Q6FV13_CANGA Length = 887 Score = 241 bits (617), Expect = 3e-62, Method: Composition-based stats. Identities = 68/426 (15%), Positives = 136/426 (31%), Gaps = 64/426 (15%) Query: 2 FALCDVNAFYASCE-TVFRPDLW---GKPVVVL--SNNDGCVIARNAEAKALGVKMGDPW 55 D + F+A+ P + K V+V+ +N+ + + N A+ G+K G Sbjct: 258 VFHIDFDCFFATVAYLTKDPSIKCDIEKDVIVVCHGSNNSDIASCNYVARGYGIKNGMWV 317 Query: 56 FKQKDLFRRC-GVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDL----- 107 K L + +V N++ S TL +L + SIDEA C + Sbjct: 318 GHAKRLLPQGVNIVTLPYNFDEIQAKSEIFYKTLAAMKLFDMILPISIDEAICVVVNTHP 377 Query: 108 --------TGVRNCRDLTDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQR 158 G +L ++IR ++ T +V +G A + LA+LA K Sbjct: 378 ISQESANTDGGSQSSNLDQLCKDIRLSIFSATNGCSVSIGCADSLLLARLALRKGKPNGY 437 Query: 159 QTGGVVDLSNLERQR-------KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL----- 206 + + E+ + + ++ + D+ G+G I KL D+ Sbjct: 438 F------IIDREQVQGSKDGSNEFLATFKLKDLPGVGHSIVTKLLTA--FKCKDMNLAEL 489 Query: 207 -ADTDIRFIRKHFNVV-LERTVRELRGEPCLQ------LEEFAPTKQEIICSRSFGERIT 258 + F++ V + L+G+ + E ++ + ++G R Sbjct: 490 KQRASLEFLKNCVGVKLGTKIYLALQGQDDEESTRMLFDPENYFERKSLSIEINWGIRFD 549 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS---------PFALNEPYYGNSAS 309 + + I KL + ++ + + + + Sbjct: 550 NIHEIDDFIDRCCDYLLNKLNELERKTSQLTLKVMRRAANAPVDPPKYMGMGRCDAFNRT 609 Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV----AQLNLFDDNA 365 +L PT + I A ++ + + + NLFD Sbjct: 610 SRLGIPTNEHGTIATEAKAMYRSLACPAKELRGLSIQFNKLSKLDESLSNVRSNLFDLLQ 669 Query: 366 PRPGSE 371 P + Sbjct: 670 KTPKMD 675 >UniRef50_A7TRR0 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TRR0_VANPO Length = 880 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 71/420 (16%), Positives = 133/420 (31%), Gaps = 37/420 (8%) Query: 2 FALCDVNAFYASCETVFRPDLW----GKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWF 56 D + F+A+ + D+ ++V + + + N A+ LG+K G Sbjct: 257 IFHVDFDCFFATVAALSVTDMAIDINKDAILVCHGSKNSDIASCNYVARNLGIKNGMWVS 316 Query: 57 KQKDLFRRC-GVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDLTGVRNC 113 + + L + ++C N+E S + L+ EL + SIDEA C ++ Sbjct: 317 RAEKLCPKGMKLICLPYNFEQIELKSKIFYNVLKELELFQLILPISIDEAICVISNPDPF 376 Query: 114 RDLTDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 DL IR V Q T TV +G A++ LA+LA K V S++ Sbjct: 377 IDLNGVCETIRNLVHQETGGCTVSIGCAESLILARLALRLGKPDGYYV--VNSNSDIANN 434 Query: 173 RKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDI----RFIRKHFN-VVLERTV 226 + + D+ G G KL + IK L + ++ E+ Sbjct: 435 VEFWKKFKITDLPGFGNATLNKLDEQFNIKDQNSLYNLQQLVINNDLKNILGNKTSEKLN 494 Query: 227 RELRGEPCLQ------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 L+G + + ++ + ++G R + + I A +KL + Sbjct: 495 LALKGLDDNESTKMIYDPDEVFKRKSLSMEINWGIRFENIGQVDVFIDRCAKYLVDKLIN 554 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ I + S + KL PT D I Sbjct: 555 MNSKIDQVTLKISRKAKSAPENPLKYMGMGLCDSFSKNSKLGLPTSDIGIIATEVKSLFR 614 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 + + + L + + + K + T+ Sbjct: 615 MLSCPPTELRGVSIQFNKLIDTNDVDYRL----KLPFKKIIVDDTFNKIPEKL-KPTIRK 669 >UniRef50_UPI0000D56959 PREDICTED: similar to DNA polymerase iota n=1 Tax=Tribolium castaneum RepID=UPI0000D56959 Length = 537 Score = 240 bits (614), Expect = 6e-62, Method: Composition-based stats. Identities = 71/397 (17%), Positives = 130/397 (32%), Gaps = 52/397 (13%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++ FYA E P L P+ + V+ N A+ G+K + K L Sbjct: 11 IIHIDLDCFYAQVEMNKNPSLRTVPLGI--QQKNIVVTSNYTAREFGIKKCMLIPEAKKL 68 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG------------ 109 +V + Y S +V + L++ +P VE +DE + D+T Sbjct: 69 CPSLVLVNGE-DLHDYRQTSYKVTNLLQKYTPLVERLGLDENYLDVTTLINEKLNQKSDL 127 Query: 110 ------------------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 T +EIR + +LT GIA K LAK+A Sbjct: 128 KLVGNVFGDTSDKCECGCTERLIIATTVAQEIRDVIKSELNLTSCAGIAHNKLLAKIAGA 187 Query: 152 AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI 211 K Q+ + ++S +D+ GIGR + ++L +G++T+ +L + D+ Sbjct: 188 RHKPNQQT-----VVFPNSALELILSLNAPNDIPGIGRALFEQLKCIGVETIEELQNVDL 242 Query: 212 RFIRKHFNVVLERTVREL-RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 + + + V EL G ++ Q I S I+ ++ + Sbjct: 243 KRLETVLGQDKAKLVHELSLGIDKSGVKPTGKP-QSIGLEDSC-RSISVETEVKIKLEQL 300 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN-SASVKLLTPT------QDSRDII 323 R + + + + I ++ F + + + I+ Sbjct: 301 LNRLLLLVEEDGRVPKTIKLTVR--KFNKDNKMSHRETRQCNVNPSIFSSSQPNKEAKIM 358 Query: 324 NAATRSLDAIWQAGHRYQ--KAGVMLGDFFSQGVAQL 358 + I Y G+ F L Sbjct: 359 TTIMHLFNRIIDVKKPYHITLLGLSFTKFQEPPKNTL 395 >UniRef50_A8PB46 ImpB/MucB/SamB family protein n=1 Tax=Brugia malayi RepID=A8PB46_BRUMA Length = 500 Score = 240 bits (614), Expect = 7e-62, Method: Composition-based stats. Identities = 73/369 (19%), Positives = 140/369 (37%), Gaps = 43/369 (11%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVV-----LSNNDGCVIARNAEAKALGVKMGDPW 55 + AL D++ FY E +P L+GKPV V +N G ++A + EA+ G+K G Sbjct: 6 IIALIDMDCFYVQVEQRLQPHLYGKPVAVVQHSSGNNRGGGLLAISYEARPFGIKRGMFP 65 Query: 56 FKQKDLFRRCGVVCFS-------SNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCD 106 + K L + ++ Y D S V L E + R VE S+DEA+ D Sbjct: 66 EQAKTLCSELTLCYVPVGEHVDKADITRYRDASAEVFKVLHEFNSRIIVERASVDEAYLD 125 Query: 107 LTGV-RNCRDLT------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAA 153 LT + + + T D +IR + + T GI +K +AKL Sbjct: 126 LTALVEHIYETTDPSIKLKLIIGADLVEQIRRNIKKSTAFNCSAGIGSSKMIAKLVCSRH 185 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIR 212 K G + E K+ P+++V +G ++ + L + IKT+ +L++ + Sbjct: 186 KP------GQQTVVFNEAIPKVFEYTPINEVRNLGGKLGRALMEKFNIKTMGELSEISMS 239 Query: 213 FIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSY 270 + ++F + G ++ + + S++F + ++ + Sbjct: 240 HLSEYFPAQAKWIYNIAHGIDDEKV-TARDKQSSVAVSKNFPGANALKTDVDVKFWLEGL 298 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 ++L + I+T+ + + T D + + + Sbjct: 299 VKELVKRLIDDQIA------NIRTASTLHIGCTTDIHLTRSMQMKTYDPKALFTSVWAIF 352 Query: 331 DAIWQAGHR 339 I ++G Sbjct: 353 RHINKSGIP 361 >UniRef50_Q4A688 DNA polymerase IV n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A688_MYCS5 Length = 413 Score = 239 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 67/386 (17%), Positives = 151/386 (39%), Gaps = 23/386 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D ++++ S +P L KPV + S+ ++ + E K G K G Sbjct: 9 IFHIDFDSYFVSAVRTIKPYLKNKPVAIARSSYKSLAVSVSYELKVKGAKAGMTRGDILK 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTL-EELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 + + S ++ LY ++S ++ + L E++S ++ I S+DE + D+ + N + Sbjct: 69 IEP--NTIFVSEDFSLYTNLSRKIFAYLQEKISHKILIASVDECYLDVNHLVNDEKKALN 126 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + + +L+ + + +GI+ TK AK+ + K + ++L N + Sbjct: 127 LAKYTQRKILEVFDIPITIGISTTKWYAKMTTNLNKPFGIGLTNKMNLIN-------ILN 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI--RKHFNVVLERTVRELRGEPCLQ 236 LP+ D +GIG+ + +KL + I + DL +I + + F + + L+ + + Sbjct: 180 LPIIDFYGIGKSLVEKLKTLKIYYIKDLYARNIEDLSLVEVFGTTAYKYLDALKFDKYEE 239 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + I SF + Q + A + +LR I+ + Sbjct: 240 IIPEIKKSKVIGHESSFENINIPQEEVLQRLKEIVALVSNRLRYSSLVSNTINVKAR--- 296 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-- 354 + + + K+ Q+ + A + + G + + S+ Sbjct: 297 ---IQSKKWFNKNKKIPQYCQEFKCFWKYAYEIYQKNY-ENKKLNSIGFSVSNLKSEYDL 352 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTL 380 LNLF+ + ++ ++++ Sbjct: 353 EINLNLFEKPIENSKAIEIANQINSI 378 >UniRef50_C6HJM8 DNA damage repair protein Mus42 n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HJM8_AJECH Length = 1111 Score = 238 bits (609), Expect = 3e-61, Method: Composition-based stats. Identities = 59/423 (13%), Positives = 116/423 (27%), Gaps = 108/423 (25%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+L +PV + + + N A++ G+K G Sbjct: 364 ILHVDFDSFFAAVSLQKHPELVDQPVAIAHGTGPGSEIASCNYPARSFGIKNGMWMKGAL 423 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV--------- 110 + + ++ Y + S + + + V+ SIDEA D+T + Sbjct: 424 QMCP--NLKVLPYDFAAYEEASRKFYDVILSIDAVVQSVSIDEALVDITNLCQDAVGSRG 481 Query: 111 ---------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + +++R +V ++T + VGI A++A AK + Sbjct: 482 RDISEDSIWREQEKADEIAQKLRDSVKEQTGCNISVGIGGNVLQARVALRKAKPAGQFQL 541 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIG----RRISKKLDAMGIKTVLDLADTDIRFIRKH 217 + + L V D+ +G R+ + GI+ V F++ Sbjct: 542 ------KPDAVLDFIGTLAVKDLPEVGFHPPRKSVSAEISWGIRFVNQAQA--EEFVQS- 592 Query: 218 FNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 EL Sbjct: 593 -------LCDELH-------------------------------------RRLVENL--- 605 Query: 278 LRSEHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 + ++ I + + SV L T S I A Sbjct: 606 -----VKGKQLTMRIMKRSADAPLEPVKHLGHGKCDTFNKSVNLGVATNASDIIGREAIS 660 Query: 329 SLDAIWQAGHRYQKAGVMLGDFFS----------QGVAQLNLFDDNAPRPGSEQLMTVMD 378 L + + GV + + Q++ + P + D Sbjct: 661 ILRGFKFSPGDLRGLGVQMTKLEPVKQNNANESERTQKQISFKPASPPPQRETPIDP--D 718 Query: 379 TLN 381 +N Sbjct: 719 EIN 721 >UniRef50_C5J784 DNA polymerase IV n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J784_MYCCR Length = 387 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 75/394 (19%), Positives = 151/394 (38%), Gaps = 28/394 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-GCVIARNAEAKALGVKMGDPWFKQK 59 + A D+N F+ S E +P+L +PV + ++ ++ + + K G K+ D + K Sbjct: 4 IIAHIDINTFFVSAEIRLKPELKKQPVAIARSDKFAMAVSISKQVKEKGFKITDKLSQIK 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMS-TLEELSPRVEIYSIDEAFCDLTGV-RNCRDLT 117 +V N + Y +S + ++ S ++EIYSIDE F DL+ +N R + Sbjct: 64 SAIP--DLVIIKPNLKYYQFLSKKFFQYIVKNFSKKIEIYSIDECFVDLSKFAKNFRTIK 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 I+ + L +GI+ K LAK+A + AK T + + + + Sbjct: 122 SMIYYIKNKIETDLELPCSIGISYNKFLAKMATNLAK----NTRENIFILPRSKIETHIY 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADT--DIRFIRKHFNVVLERTVRELRGEPCL 235 LP+ ++GIG+ S+ L+ + T+ D + + + K + L + Sbjct: 178 NLPIQQLFGIGKSTSRLLNEKKVYTIKDFLNLGINNEILIKIMGTTRNYFYQNLLEKGDD 237 Query: 236 QLEEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + + +F D + + + KL+ + I + Sbjct: 238 VILDKESHFKSVSRFNTFLSSETIDAKQIALITKEFCSDLLTKLQMYQKNTARIEIY--Y 295 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + Y L TP+ D I ++ I + + GV +Q Sbjct: 296 HNYLGKTIRYW----KNLDTPSNDFNFISTELLFLVEKI-DNYNNIKGFGVRFSKLANQK 350 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 FD + +++ ++ +NA+ G + Sbjct: 351 ------FDSTMTKSKVKKI---INKINAQHGSKS 375 >UniRef50_A4E7R3 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E7R3_9ACTN Length = 523 Score = 235 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 70/321 (21%), Positives = 122/321 (38%), Gaps = 17/321 (5%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ FYAS E V R + +VV + G +A K LG+ F+ Sbjct: 30 YICIDLKTFYASVECVDRGLNPLTTNLVVADESRGRTTICLAITQAMKDLGIHNRCRLFE 89 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR- 114 D + + Y ++S ++ E V +YSIDE F D+T + Sbjct: 90 IPD---GIDYIKAVPRMQHYMEVSAQIYGIYLEYVSPQDVHVYSIDECFIDVTPYLDLYH 146 Query: 115 -DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 D +R VL RT +T VGI AK+A K GV L + ++ Sbjct: 147 TDAEGLACTLRDEVLARTGITATVGIGPNLFQAKVALDVTAKHVASRIGV--LDDETFRK 204 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 ++ P+ D+WGIG ++ +L+ G+ ++ +A D + V E + G Sbjct: 205 EIWPHRPITDIWGIGPGVAARLEKYGVYDLMGVAALDENLLYDELGVNAEYLIDHAFGRE 264 Query: 234 CLQLEEFAPTKQEIICSRSFGERITD---YPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + + + S + G+ ++ Y + A L +H C IS Sbjct: 265 PTTIADIQAYRPQ-ATSTTTGQVLSKGYAYEQAYTVLREMVDNAVLDLVDKHVVCDSISL 323 Query: 291 FIKTSPFALNEPYYGNSASVK 311 F+ + + S + + Sbjct: 324 FVGYASERADIRRLDASGTAQ 344 Score = 91.3 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 31/103 (30%) Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 + ++AS KL T + I+ ++ + + + A ++LF Sbjct: 413 FAHSNASRKLPERTNSFKKIMGYFDELWAQTVDPKRPVKRINLGFSNLVPEEFATIDLFS 472 Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 D L + + K G+ L +R Sbjct: 473 DIEADERERDLARAVLAVKGKYGKNALVKGLSFTAGATARERN 515 >UniRef50_B8NVT6 DNA-directed polymerase kappa, putative n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8NVT6_ASPFN Length = 573 Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats. Identities = 70/367 (19%), Positives = 139/367 (37%), Gaps = 56/367 (15%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+A+ E + RP+L P Sbjct: 117 IVHVDCDAFFAAVEELDRPELKTVPFA--------------------------------- 143 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTDF 119 ++C N++ Y+ + + + + P E SIDEA+ ++T N D D Sbjct: 144 -----LICLPINHQKYSAKAQEIRAIFAQYDPLFESASIDEAYLNITAYCTENQIDPEDA 198 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +RA VL++T ++V GIA +AK+A++ K + ++ + + M L Sbjct: 199 VNRMRAEVLEQTKISVSAGIAANAKIAKIASNRNKPNGQFR----VPNDRDAILEFMKDL 254 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLE 238 PV V G+GR ++LDA+GIKT D+ + K F + G +++ Sbjct: 255 PVRKVNGVGRVFERELDAVGIKTCGDIYSQ-RALLAKLFGEKAFHFLAQCYLGLGRTKIQ 313 Query: 239 EFAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F E + ++R+ + + A + L R + +K + F Sbjct: 314 PVENYERKSVGTESTFNE-MGGKEALREKLWAIAQELEKDLTRTEFKGRTLVLKVKLATF 372 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGV 355 + S + ++D+ + L+ + + R + G+ + S Sbjct: 373 EV------LSRQCQPPKAVFLAKDLYTFSLPMLEKLEKEIPNMRLRLLGLRCTNLVSTKK 426 Query: 356 AQLNLFD 362 ++ F Sbjct: 427 GGIDFFG 433 >UniRef50_B4QLD4 GD13564 n=1 Tax=Drosophila simulans RepID=B4QLD4_DROSI Length = 940 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 54/414 (13%), Positives = 114/414 (27%), Gaps = 128/414 (30%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-------------------------- 35 D++ F+ S RP+L G P+ V + G Sbjct: 275 VMHIDMDCFFVSVGLRARPELRGLPIAVTHSKGGNAATDVPVHPQADRKAELELFAQRFE 334 Query: 36 -----------------------CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+ G++ G + L + Sbjct: 335 HHFHDGDKAEKVRSGFDKKMSLSEIASCSYEAREKGIRNGMFVGQALKLCPELKTI--PY 392 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTH 132 ++E Y +++ + T+ + + +E + +D Sbjct: 393 DFEGYKEVAFTLYDTVAQYTLNIEAFLLD------------------------------- 421 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 ++ LA LA + +D + G+G +S Sbjct: 422 -------SKNDILAYLA----------------------------PMSLDLLPGVGSSMS 446 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSR 251 KL G+ D+ T + + + + + RG L + ++ + Sbjct: 447 HKLKQAGLNNCGDVQKTTLWRLERVLGKKLGQNLFQNCRGIDDRPL-AYEQARKTVSAEM 505 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALNEP 302 +FG R T+ Q +C + ++L + R ++ I TS + + Sbjct: 506 NFGIRFTNSAECEQFLCQLSDEVTKRLVEIKRKARSVNLKIMVRAAEAPVETSKYMGHGV 565 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + S + T D I + H + G+ L Sbjct: 566 CDTINKSSLIKHATDDVNVITTVVLNLMREADIPPHELRGIGIHLTRLEDASAV 619 >UniRef50_Q54KS3 UMUC-like DNA-repair protein n=1 Tax=Dictyostelium discoideum RepID=Q54KS3_DICDI Length = 517 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 59/310 (19%), Positives = 124/310 (40%), Gaps = 18/310 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F D++AFYA+ E + +L G PV V S + ++ N A+A GV+ G P L Sbjct: 83 FIHIDMDAFYANVEEMDNKELIGHPVAVGSID--MLVTSNYAARAYGVRSGLPGLLAMKL 140 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD---LTD 118 ++ S + Y ++S + + L + S+DE D+T + D Sbjct: 141 CPH--LIILPSRMDRYREVSLIIRNILYKFDKNYVSPSLDEGCIDITEYLKDNENLTGID 198 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +++ + ++T LT +GI+ + L+K+++ K + + ++ + Sbjct: 199 VANQLQNDIFEKTTLTCSMGISCSPLLSKISSEINKPNGYFYL------DKQYSQEFIKT 252 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + + + GIG+ + L +G++ V D+ + + E + P + Sbjct: 253 IQIKKLPGIGKVRQELLKTLGLEFVSDIIEH-RYELYYLLPEQRELLFKHALAIPIFPNK 311 Query: 239 EFAPTKQ---EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + I ++ E + D + + S +A E L E++Y + ++ Sbjct: 312 SSFRINKKKTMISKEKNCKE-LYDEKDLEDLMKSLFDKAIEMLNIENKYATTLIVKVQDF 370 Query: 296 PFALNEPYYG 305 F + Y Sbjct: 371 SFKVINYSYQ 380 >UniRef50_D1I1G6 Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) n=5 Tax=Magnoliophyta RepID=D1I1G6_VITVI Length = 773 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 80/432 (18%), Positives = 138/432 (31%), Gaps = 89/432 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E +PDL G P V+ N G +IA + EA+ GVK + Sbjct: 13 IIAHIDMDCFYVQVEQRKQPDLRGLPTAVVQYNSWKGGGLIAVSYEARKFGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSID----------E 102 K + + +V ++ +Y + + V+S L R E SID E Sbjct: 73 AKQVCPQIQLVQVPVARGKADLNVYRNAGSEVVSILARKG-RCERASIDEVYLDLTDAAE 131 Query: 103 AFC----------------------------DLTGVRN--------------CRDLTDFG 120 A D+ Sbjct: 132 AMLAEMPPESLEAIDEEALKSHVLGLNEGGNDIKESVRVWLCRSQADHRDKLLACGALIV 191 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 E+R V + T T GIA K LAKLA+ K Q+ + L R L+ +LP Sbjct: 192 AELRMQVFRETEFTCSAGIAHNKMLAKLASAMNKPAQQ------TIVPLSCVRGLLGSLP 245 Query: 181 VDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 + + +G ++ L + +G+ TV DL +++ + + RG ++ Sbjct: 246 IKKMKQLGGKLGSSLQSDLGVNTVGDLLQFSEEKLQECYGINTGTWLWNIARGISGEEV- 304 Query: 239 EFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEKLRSE----HQYCRFISTFI 292 E + ++F + S+ + E+LRS+ + ++ Sbjct: 305 ESRLLSKSHGSGKTFPGPKALKTIASVENWLNELCEELDERLRSDLEQNKRIAHTLTLHA 364 Query: 293 K-TSPFALNEPYYGNSASVKLLTPTQ----DSRDIINAATRSL--------DAIWQAGHR 339 + + S S L D+ ++ A R A +G Sbjct: 365 RAYKSNDSDSHKKFPSKSCPLRYGIAKIQEDALNLFQAGLREYLGSCKVKTRANQCSGWS 424 Query: 340 YQKAGVMLGDFF 351 V Sbjct: 425 ITALSVSASKIV 436 >UniRef50_Q17IT1 Terminal deoxycytidyl transferase rev1 n=1 Tax=Aedes aegypti RepID=Q17IT1_AEDAE Length = 650 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 106/292 (36%), Gaps = 21/292 (7%) Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRT 131 +E+Y + + + + +E S DE F DLT + N D+ DF IR + + T Sbjct: 18 HEVYTACRDGLHA--NRYTLNIEAVSCDEMFVDLTDLINDVGVDVMDFVGYIRDQIREST 75 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 G+ + A++A AK + E + M +P+ D+ GIG Sbjct: 76 ECPCSAGVGANRLQARMATKKAKPNGQYYLA------PETVLEYMRDIPISDLPGIGPST 129 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICS 250 + +L + T DL I +++ F + RGE L + ++ + Sbjct: 130 TYRLKQLSWSTCGDLQFVPISVLQREFGKKFGDTIYHACRGEDDRPLV-YDQVRKSVSVD 188 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF---------IKTSPFALNE 301 ++G R + + + + ++L + + I+ ++T+ F + Sbjct: 189 VNYGIRFKEEAEVERFMKQLTEEIHKRLMEIKKRGKVITVKLLVRSPEAPVETAKFMGHG 248 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 + S T D I A + I H + G+ L F + Sbjct: 249 LCDIITKSHPFKDYTCDLAVIEKAVLMLMKQIAAPPHELRGIGLQLSKFDEK 300 >UniRef50_UPI0001850634 polymerase (DNA directed) iota n=1 Tax=Nasonia vitripennis RepID=UPI0001850634 Length = 635 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 82/455 (18%), Positives = 138/455 (30%), Gaps = 91/455 (20%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 DV+ FYA E + P+ GKP+ V V+ N EA+A GVK + L Sbjct: 26 IVHIDVDYFYAQVEMMRHPEFQGKPLGV--QQKNIVVTCNYEARAFGVKKCMLIEEALRL 83 Query: 62 FRRCGVVCFSS-NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-------- 112 ++ + Y MS +++ L + + VE +DE F D+T V N Sbjct: 84 CPS--LILVKGEDLTPYRRMSAKILELLHQFTSSVEKLGLDENFIDVTSVVNEYTTRIGN 141 Query: 113 --------------------------------------------CRDLTDFGREI----R 124 C I R Sbjct: 142 NSKSSQHDENTTREESTFVQQEDMDHCMPVGKIFSTPEEECPCGCHTRLAVASSIAMDMR 201 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 + +L LT GIA K LAKL K Q+ + L S V + Sbjct: 202 SKILNELGLTCSAGIAHNKLLAKLGGAVNKPNQQT-----VVYPCSAASLLSSLGSVSKI 256 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPT 243 G+GRR ++ L A I TV D+ T + ++ L R G ++ Sbjct: 257 PGVGRRTAESLTANNILTVDDVRKTPLERLQVKIGKELARKIKDYAEGIDDTPVKPSGRP 316 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP------F 297 Q I F ++++ + + + R E + + + ++ Sbjct: 317 -QSIGLEDGF-KKVSLVDEVESRLSALLRRLTELAAEDGRIPICLKLTVRKQDSINKPAA 374 Query: 298 ALNEPYYGNSASVKLL---TPTQ---------DSRDIINAATRSLDAIWQAGHRYQ--KA 343 A + S + P+ D I+ + + + Sbjct: 375 AGSSTGKRESRQCAIPSHLVPSSKGAKGTHLYDHTKILALVMKLFHRVVDISKPFHLTLL 434 Query: 344 GVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 G+ F + + N + + +VMD Sbjct: 435 GLAFTKFQEEKCSGKN--SIASFLRKQVAVQSVMD 467 >UniRef50_O48586 DNA-damage-inducible protein P n=6 Tax=Embryophyta RepID=O48586_ARATH Length = 689 Score = 229 bits (586), Expect = 1e-58, Method: Composition-based stats. Identities = 81/453 (17%), Positives = 144/453 (31%), Gaps = 111/453 (24%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E +P+L G P V+ N G +IA + EA+ GVK + Sbjct: 13 VIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKCGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRV------------MSTLEELSPRVEIYSI 100 K + +V ++ LY + V +S L + S + E SI Sbjct: 73 AKAACPQIQLVQVPVARGKADLNLYRSAGSEVDGSGSYYYTVCVVSILAK-SGKCERASI 131 Query: 101 DEAFCDLTGVRNCRDLTD------------------------------------------ 118 DE + DLT Sbjct: 132 DEVYLDLTDAAESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDAD 191 Query: 119 -----------FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 E+R VL+ T T GIA K LAKLA+ K Q+ + Sbjct: 192 RRDKLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQ------TVV 245 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNVV-LERT 225 ++L+S+LP+ + +G ++ L +G+ TV DL +++H+ V Sbjct: 246 PYAAVQELLSSLPIKKMKQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQEHYGVNTGTWL 305 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSF--GERITDYPSMRQAICSYAARAAEK----LR 279 RG +++ + ++F + +++ + + +E+ L Sbjct: 306 WNIARGISGEEVQ-GRLLPKSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSDLE 364 Query: 280 SEHQYCRFISTFIKTSPFALNEPYYGNSAS-VKLLTPTQ-----------DSRDIINAAT 327 + ++ S F + +S S K + + D+ ++ AA Sbjct: 365 QNKRIASTLTL--HASAFRVPTSLSKDSDSHKKFPSKSCPMRYGVTKIQEDAFNLFQAAL 422 Query: 328 RSL--------DAIWQAGHRYQKAGVMLGDFFS 352 R R V Sbjct: 423 REYMGSFGIKPQGNKLETWRITGLSVSASKIVD 455 >UniRef50_Q6R286 SOS inducible DNA polymerase (Fragment) n=15 Tax=Enterobacteriaceae RepID=Q6R286_ECOLX Length = 395 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD Sbjct: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG Sbjct: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW Sbjct: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats. Identities = 127/127 (100%), Positives = 127/127 (100%) Query: 269 SYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 SYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR Sbjct: 269 SYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT Sbjct: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 Query: 389 LYFAGQG 395 LYFAGQG Sbjct: 389 LYFAGQG 395 >UniRef50_B2I405 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I405_ACIBC Length = 228 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 90/222 (40%), Positives = 137/222 (61%), Gaps = 5/222 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D+N YAS E F P L KP+++LSNND ++AR+ EAK LG++MG P FK KD Sbjct: 5 IFALIDINNCYASIERFFNPQLIDKPIIILSNNDTSIVARSDEAKLLGIRMGVPVFKIKD 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCRDLTD 118 + +R VV SSNY +Y +MS R S + + +E+YSIDEA+ LT + DLT+ Sbjct: 65 IIKRNNVVMLSSNYTVYGEMSRRFHSIINQFVTDQEMEVYSIDEAWLLLTNYESLFDLTE 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE--RQRKLM 176 + I+ + + L V VG+ ++KT AKL N AKK + GV DL N++ + + Sbjct: 125 YAHTIKKEIFRLIGLPVSVGLGRSKTEAKLGNFLAKKM-KHFNGVCDLVNMDPLIKEDIF 183 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF 218 +P+++VWG+G +I+K+L+ G +V DLA + +I+ + Sbjct: 184 QDIPLNEVWGVGSQIAKQLNNFGFSSVYDLAVANPVWIKNNL 225 >UniRef50_B3RPL1 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3RPL1_TRIAD Length = 386 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 73/396 (18%), Positives = 130/396 (32%), Gaps = 58/396 (14%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++ FYA E L KPV + ++ N A+ GV P K + Sbjct: 5 IIHLDIDCFYAQVEMAKNSSLRNKPVGI--RQKHIIVTSNYPARERGVGKLIPLTKALEK 62 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD------ 115 +V + Y ++S +V L++ S +V DE + D+T + CR Sbjct: 63 CPDL-IVINGEDLTEYREVSFKVTDYLKKFSTKVHRLGFDENYIDVTELVQCRLNQFQGR 121 Query: 116 ----------------------------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + E+R + LT GIA K L+K Sbjct: 122 LFVGYLYQNSNTVKAQACDCNCRLRMIIGSQIAAEMRQGLWNVFSLTSSGGIAHNKMLSK 181 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 + + K + E L+ +L + + GIG + KL ++GI TV +L+ Sbjct: 182 IVSGLHKPNLQTA------IYPEDTLDLLHSLELRKIAGIGSATNNKLQSVGITTVKELS 235 Query: 208 DTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + ++ HF + +G + A + I SF T S ++ Sbjct: 236 TLPLAVLKTHFPTPQACTLFQWCKGIDDSDVVA-ATKPKSIGVEDSFSRCCTMIAS-KKR 293 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL---TPTQDSR--- 320 I +L ++ + + I Y S + T+D+ Sbjct: 294 ISDLIRHLLSRLVDGCEHPQTVKLTIIKHD---RSSYKRESKQCSVPSTFYSTKDTDKKC 350 Query: 321 -DIINAATRSLDAIWQAGHR--YQKAGVMLGDFFSQ 353 I++ L + + GV +F + Sbjct: 351 SIILDLMMNLLRKLVDIHKPFRLRLFGVTFTNFKDK 386 >UniRef50_D2VGP4 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VGP4_NAEGR Length = 485 Score = 224 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 66/409 (16%), Positives = 133/409 (32%), Gaps = 69/409 (16%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAK-ALGVKMGDPWFKQK 59 + D++ FYA E V P P+ + N + N + + + Sbjct: 15 VIIHLDLDCFYAQVEEVENPKYRDLPLGIQQNQT--ISTVNYCGRIKYKIPKMTRVKQAL 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMST-LEELSP------RVEIYSIDEAFCDLTG--V 110 ++ ++ + E+Y + S ++ + E +E+ IDEA+ ++T Sbjct: 73 EMCPE--LIVIPARMEIYREESRKIFDECIGECVNSFHGDCVLEVCGIDEAYINVTDEVN 130 Query: 111 RNCRDLTD-----------------------------FGREIRATVLQRTHLTVGVGIAQ 141 + T+ EIR V T+ GIA Sbjct: 131 WRLENATELGIDVKDHRGRKVSKSVNSQDNHLNIGSQIAEEIRCNVFNSLGYTISAGIAH 190 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM-GI 200 +K L+KLA+ K + L E + +++ V + +G +KL + I Sbjct: 191 SKFLSKLASKKQKPNGQA------LIYSESFDEEINSQDVSIIPNVGYTTKQKLAELCQI 244 Query: 201 KTVLDLADTDIRFIRKHFN--VVLERTVRELRGEPCLQLEEFAP--TKQEIICSRSFGER 256 TV L I K FN + + G+ + + + I +F Sbjct: 245 STVKQLRAQTYVNIIKCFNSDKAAIKVLNIANGKFDEEYDRVVSKGPPKSIGSELTFLT- 303 Query: 257 ITDYPSMRQAICSYAARAAEKLRSE-----HQYCRFISTFIKTSPFALNEPYYGNSASVK 311 I Y Q + + +++ + ++Y ++ + + +PY+ S + Sbjct: 304 IQTYEDFEQKLRTITGDLFTRIQRDLKRNSNRYATKLTL--RYCHGSYRDPYHSVSCKIT 361 Query: 312 LLTPTQ-------DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 D +I + + + Q+ GV + DF Sbjct: 362 SNIYNNLNNYEEKDESNIHSLVIKMFKQKVSLPFKLQRMGVSVSDFVEP 410 >UniRef50_UPI000038E47A DNA polymerase IV n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E47A Length = 350 Score = 223 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 140/362 (38%), Gaps = 28/362 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D + FYA E + P + KPVVV + N G V N A+++G+K G P Sbjct: 4 IIFIDFDYFYAQVEEIMDPSIKDKPVVVCVYSGRTENSGAVATSNYIARSIGIKSGMPLP 63 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRD 115 + ++ + V + Y + S+RVM+T+ S ++EI SIDEA+ D+TG +D Sbjct: 64 QAMNIGKD-KAVFIPIRKDFYKEFSDRVMNTISTYSDKMEIASIDEAYLDVTGECSTFQD 122 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 G EI+ + + + V GI+ K +AK+ AK + + + Sbjct: 123 AVKLGEEIKEEIFKEYGMKVSAGISINKAIAKILGDMAKPDGLKY------IDESMVEEF 176 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPC 234 ++ L V + GIG +SKKL+ GIK + D+ + + + + V Sbjct: 177 LNTLEVKKIPGIGSILSKKLNDAGIKYLKDILGANRQAMIEILGNARYNYLVEIAENRYN 236 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 +EE ++ + E D + + A K + + I Sbjct: 237 SPVEE--RIRKNYGRYITLPENTRDTNIIMPLLRKAVDSAFSK--APGLPGEISAIGIM- 291 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQ 353 + Y + L + AT + I + + ++ GV +G S Sbjct: 292 EDLNIVSRSYTGGR-ISLESA-------YGIATGLMGKILEADSRKLRRIGVRIGKMSSN 343 Query: 354 GV 355 Sbjct: 344 ES 345 >UniRef50_C4VB58 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4VB58_NOSCE Length = 554 Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats. Identities = 81/418 (19%), Positives = 130/418 (31%), Gaps = 78/418 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D+++FYASCE++ P+ P+ V S N + N A+ GVK G P + K Sbjct: 86 IYCHVDLDSFYASCESLDHPEYKSIPLAVGSMN--MLTTSNYVARKYGVKAGMPGYIGKQ 143 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFC---DLTGVRNCRDLT 117 L + ++ Y S RVMS L +EIY +DEA D + L Sbjct: 144 LCP--TLKIVKCDFAKYNYYSERVMSVLSIFDEDIEIYGVDEACLVFDDSKYKKAVMKLN 201 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL-------- 169 D G I + + + V I N++ K + Q + Sbjct: 202 DIGYNISVLNQEASKVRVSSKIVGFDQHYSSTNNSYKIFTPQNDSIYTPITDTKFSFRNI 261 Query: 170 ----ERQRKL------------------------------------------MSALPVDD 183 + R L + L D Sbjct: 262 RKLVDNIRTLVFISTGLTISSGISVTRGLSKYACGINKPNGSFVIDKNFDSHILDLETDK 321 Query: 184 VWGIGRRISK-KLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFA 241 + GIG + L A IK + +L D ++ FI G + + Sbjct: 322 INGIGLATKELLLKAYNIKYIKELRD-NLHFIYLTLPYKSFINLFNLSYGLSVFDFSDRS 380 Query: 242 PTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I + SF TD+ + + KL+S+ C I+ K S F+ Sbjct: 381 NKPVKSIGMNTSF-RPTTDFSDICTVLWCLCTSLCTKLKSKSLVCSTITLHYKFSSFS-- 437 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDA------IWQAGHRYQKAGVMLGDFFS 352 + K D + N L A ++ + GV S Sbjct: 438 ----SRTKQSKTSKLIDDPVQLFNICYDLLLASKVILDTKIVPNKIRLLGVSCSLLTS 491 >UniRef50_UPI00017E10E6 DNA-directed DNA polymerase eta n=2 Tax=Apocrita RepID=UPI00017E10E6 Length = 753 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 76/440 (17%), Positives = 146/440 (33%), Gaps = 98/440 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + L D++ F+ ET +P+ GKP+ V+ N G +IA N EA+ GV + Sbjct: 8 IVVLIDMDCFFCQVETRLKPEHAGKPLAVVQYNQWKLGGIIAVNYEARDFGVTRHMRGEE 67 Query: 58 QKDLFRRCGVVCFSS-----NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K+ + S + Y V+ L++ VE S+DEA+ D+T + + Sbjct: 68 AKEKCPDIVLAIVPSQRGKADTSRYRSAGREVIDVLKKYCNIVERASVDEAYLDITQIVD 127 Query: 113 CRD----------------------------------------LTDFGREI--------- 123 + L++ +I Sbjct: 128 DKLSKEIIDSDSISKQLENSYIVGFSESDINNEEQRSKGLQDWLSELADDIQIQRLAIAG 187 Query: 124 ------RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 R V T GI+ K LAKLA K ++ + +L Sbjct: 188 AFVEHIRKEVYDTTGFRCSAGISFNKILAKLACGLHKPNRQ------TILPASAVPELYG 241 Query: 178 ALPVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCL 235 +LPV V +G ++ +D++ + DL +++++ F+ RG Sbjct: 242 SLPVKKVRNLGGKLGDMVIDSLKCNVMADLLPYSLQYLQNRFDEKTGMWLYNIARGIDSE 301 Query: 236 QLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSE----HQYCRFIS 289 + + I + F + I + ++ I +A E+L + + + Sbjct: 302 PVTP-RLVSKSIGACKRFPGKQAIVELDVLKHWIGELSAEVCERLEQDLEENERKASQLI 360 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPT------QDSRDIINAATRSLDAIWQAGHRYQKA 343 + ++ S +V L + Q ++ A + L + Sbjct: 361 VSFQYC---QDKKLVSQSRTVALTSYKQEKVAEQSLNIVVKATQQLLISF---------L 408 Query: 344 GVMLGDFFSQGVAQ--LNLF 361 G+ G F ++ +N F Sbjct: 409 GLSAGKFIKAKGSENFMNFF 428 >UniRef50_B4H4B7 GL20704 n=1 Tax=Drosophila persimilis RepID=B4H4B7_DROPE Length = 811 Score = 221 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 88/259 (33%), Gaps = 58/259 (22%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-------------------------- 35 D++ F+ S P+ G P+ V + G Sbjct: 273 IMHIDMDCFFVSVGLRSHPEWRGLPIAVTHSKGGNAATDVPVHPQADRQAELKLFAERFE 332 Query: 36 -----------------------CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+A G++ G + L + Sbjct: 333 HQLHDNIRADKVRSGFDKKMSLSEIASCSYEARAKGIRNGMFVGQALKLCPELKTI--PY 390 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQR 130 ++E Y +++ + T+ + + +E S DE F DLT + D+ F +R V + Sbjct: 391 DFEGYKEVAFALYDTVAQYTLNIEAVSCDEMFVDLTDLVEDLQVDVMSFVAHLREEVRNK 450 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T G+ K LA++A AK + G M+ ++ + G+G Sbjct: 451 TGCPCSAGVGTNKLLARMATKRAKPDGQYLLG-----PGTDVLGYMAPTALETLPGVGSS 505 Query: 191 ISKKLDAMGIKTVLDLADT 209 + KL+ G++ D+ T Sbjct: 506 LRHKLEQAGLRNCADVQRT 524 >UniRef50_A4HNL7 DNA damage repair protein, putative n=3 Tax=Leishmania RepID=A4HNL7_LEIBR Length = 624 Score = 220 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 56/324 (17%), Positives = 111/324 (34%), Gaps = 43/324 (13%) Query: 2 FALCDVNAFYASCETVFRPD---LWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFK 57 F D++AF+ S + +P+ L KPV + + + + + N A++ G+ G Sbjct: 63 FLHVDMDAFFCSV-QLAKPEYAHLRTKPVGIAAGKYNSDISSCNYLARSYGIHAGMYVNS 121 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-----VEIYSIDEAFCDLTGVRN 112 K+ +V + E ++ + + E P +E+YSIDE T + Sbjct: 122 AKERCPE--LVTLGHDLEACERVAKTLYRIIFESFPASVKMSMEVYSIDEVML-ATDTTD 178 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 L F +R + T T GI LA++A K + + + + Sbjct: 179 YGLLQSFCEAVRKELFSTTGCTASCGIGPNIMLARVATDCCKPNG------ILVVHAKDV 232 Query: 173 RKLMSALPVDDVWGIGRRISKK----LDAMGI---------KTVLDLADTDIRFIRKHFN 219 + M++LP+ + G G +K L + T + +++ Sbjct: 233 PQTMASLPLKYIHGAGESTMEKICRALREQHVIDENTDAGDVTCGSVQRLRREVLQRILG 292 Query: 220 VV-LERTVRELRGEPCLQLEEF----------APTKQEIICSRSFGERITDYPSMRQAIC 268 E +RGE + T + CS ++ R D + + Sbjct: 293 KRHGETFYHLVRGEDSRVVTRTGDSEDQRHLGKRTPSVVGCSMNYAVRPEDIEDVWGIVR 352 Query: 269 SYAARAAEKLRSEHQYCRFISTFI 292 KL+ + + + + Sbjct: 353 QLLDHVCAKLQRANTVAQGLRITL 376 >UniRef50_D1BE66 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BE66_SANKS Length = 346 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 135/362 (37%), Gaps = 25/362 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D +AF+AS RP+L P+ V++ V + N A+ALGV G Sbjct: 7 LHADADAFFASVVLRSRPELVAVPMAVVA--HVFVASANYPARALGVTGGMLADDALR-- 62 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 + G+V + + + E + VE S++EAF D+ G + G + Sbjct: 63 QHPGLVLVDVPRAEVEEAGDALFDLFHECARAVEPGSVEEAFLDV-GASDWDAAVAAGHD 121 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +R L V VG+ +TK +AKLA+ A K G ER+ +L +ALP+ Sbjct: 122 LRRRAAAELGLPVSVGVGRTKLMAKLASRATKPDGLHVIG------PEREAELRTALPLG 175 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE-RTVRELRGEPCLQLEEFA 241 +VWG+G +L +G++ + DL D +++ + R R G + Sbjct: 176 EVWGVGAATRDRLANLGVQRLGDLDDVPRALLQQACGTAMARRLWRIRDGTDDATVRTV- 234 Query: 242 PTKQEIICSR-SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I + G D + + S A RA + + ++ + Sbjct: 235 EARSVISAEGATSGYGRADLSTA-DLVASCAVRACRRAARAGLVAAGLVLTLRAEGGSPV 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLD-AIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 L T D++ A + A+ + V L G+ Q Sbjct: 294 VVK------RSLAEATSSPEDVLPVARDLVATALADEVATVR---VSLTGLLPAGLVQQT 344 Query: 360 LF 361 LF Sbjct: 345 LF 346 >UniRef50_Q7QBI8 AGAP003157-PA (Fragment) n=3 Tax=Culicidae RepID=Q7QBI8_ANOGA Length = 696 Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats. Identities = 70/407 (17%), Positives = 124/407 (30%), Gaps = 66/407 (16%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ +YA E V P L KP V CV+ N A+ G+K P + Sbjct: 17 VIIHIDMDYYYAQVEEVLNPSLKDKPFAV--KQRFCVVTSNYIAREKGIKKLQPVKEALA 74 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL-----------TG 109 ++ + Y MS R+ + +P VE +DE + DL T Sbjct: 75 ACPELVLLNGE-DITKYKAMSVRINEIMHRFTPHVEKLGLDENYLDLDFVQGFIHPPRTD 133 Query: 110 VRNCRDL--------------------------TDFGREIRATVLQRTHLTVGVGIAQTK 143 + D T +EIR + Q L GIA K Sbjct: 134 ESSALDPPSHRETDRDLFRRCCCCGCDRRLILATHLAQEIRDCIFQELGLRCCAGIAHNK 193 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLD-AMGIK 201 LAKL K+ ++ + +++L V + GIG + ++ L + GI Sbjct: 194 LLAKLVGAVHKQNKQ------TVLLPTHATAFVASLGSVRSLTGIGEKTAQTLADSCGIS 247 Query: 202 TVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 TV DL ++ + KH R + G + + + S I+ Sbjct: 248 TVTDLQCIELDRLTKHLGYEQAVRLKQLALGRDDT-VVRQTGKPKSVGLEDSCPS-ISVR 305 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSAS----------- 309 R + + + + I ++ + S Sbjct: 306 ADAEDKFRHLLVRLVKNIADDGRVPIAIKVTVRKYD-LAKRTTHRESKQDKLLPSMFRHV 364 Query: 310 -VKLLTPTQDSRDIINAATRSLDAIWQAGHR--YQKAGVMLGDFFSQ 353 +L+ I+ + + + G+ F + Sbjct: 365 GGRLVLADGAQEKILTIVMKVFERMVDLRQPFNITLLGLSFFKFQER 411 >UniRef50_D0SQN6 Predicted protein n=1 Tax=Acinetobacter junii SH205 RepID=D0SQN6_ACIJU Length = 256 Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats. Identities = 80/250 (32%), Positives = 143/250 (57%), Gaps = 2/250 (0%) Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 L++ + V +VWG+GR+ KKL+ MG+++VLDL + + + I+K F++V+E+TV EL+G Sbjct: 7 ETLLAQVDVSEVWGVGRQNCKKLNTMGVQSVLDLINANPKEIKKQFSIVMEKTVLELQGL 66 Query: 233 PCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 C+ L + K++II SRS+G + + ++ ++ Y ARA +++R + C+ I +I Sbjct: 67 SCIDLSDDTVAKKQIISSRSYGNPVYEMDDIKASVRLYVARAVKRMREDGSICKMIGVYI 126 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 +TS F E Y V++ T D I AA + +D I++ G +Y+KAG++L + Sbjct: 127 QTSRFDKTER-YSPYIVVQMHEHTDDLLLITKAAMKGIDQIFKKGFKYKKAGIVLLEITD 185 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA-GQGIQQQWQMKRAMLSPRY 411 Q +LF D + + E+L ++ ++ + G+ + + W M + + SP Y Sbjct: 186 QSKFVPDLFTDYSHKQERERLSDAIEAISERFGKNLVTLGIANNKEATWHMNQNLRSPSY 245 Query: 412 TTRSSDLLRV 421 T+ SDL RV Sbjct: 246 LTKWSDLPRV 255 >UniRef50_C4Q962 Rab geranylgeranyl transferase alpha subunit, putative n=1 Tax=Schistosoma mansoni RepID=C4Q962_SCHMA Length = 1262 Score = 216 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 69/411 (16%), Positives = 111/411 (27%), Gaps = 119/411 (28%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFYA+ E RP+L PV V SN + N A+ GV+ G P F K Sbjct: 712 LIVHVDMDAFYAAVEIRDRPELRHHPVAVGSN--SMLSTSNYIARRFGVRAGLPGFLGKK 769 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--------------RVEIYSIDEAFCD 106 L + ++ ++ Y S V S L E + S+DEA+ D Sbjct: 770 LCPQLKII--PCDFVKYTAASRVVRSILMEYTVSAGNTQNPCESDNIPFSAVSLDEAYLD 827 Query: 107 LTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL 166 +T V Sbjct: 828 ITDHL---------------------------------------------------VDRC 836 Query: 167 SNLERQRKLMSALPVDD---VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 +R V GIG ++LDA GIKT DL D + Sbjct: 837 DFPIERRTFWPRSAPGAPMLVPGIGHVTERRLDAFGIKTCADLIDKRGLLWHVSTKTSMI 896 Query: 224 RTVRELRGEPCLQLEE-------------------------------FAPTKQEIICSRS 252 +R G + ++ + R+ Sbjct: 897 YYMRIALGHSDDRWLTNIKNNFDEKSNKSFGFIDNDSENSVPSIQGQVELNRKSMSVERT 956 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 F +D + A + L+ EH + I+ +K F + + S L Sbjct: 957 FS-DTSDENELMHRCEQLAQMLSTDLKEEHVKGQLITLKMKLDTFEI------RTRSQLL 1009 Query: 313 LTPTQDSRDIINAATRSLDA---------IWQAGHRYQKAGVMLGDFFSQG 354 T + I + L + G+ + + Sbjct: 1010 PDYTNHTEIINSFGRELLREEMVAFKSNPAVNKPLTLRLMGLRMSNLLPVE 1060 >UniRef50_O48585 Similarity to DNA-damage-inducible protein P n=2 Tax=Arabidopsis thaliana RepID=O48585_ARATH Length = 955 Score = 214 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 67/323 (20%), Positives = 109/323 (33%), Gaps = 58/323 (17%) Query: 2 FALCDV---------NAFYASCETVFRPDLWGKPVVVLSN----NDGCVIARNAEAKALG 48 D+ + F+ S R +L KPV V + + + N A+A G Sbjct: 314 IIHIDLLFESVKYFQDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYG 373 Query: 49 VKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT 108 VK G KDL + +V N+E Y E S DEAF D++ Sbjct: 374 VKAGMFVRHAKDLCPQ--LVIVPYNFEAYE-----------------EALSCDEAFLDVS 414 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 + + IR +L+ T + GI T +A+LA AK + + Sbjct: 415 DLSDVET-EVLASTIRNEILETTGCSASAGIGGTMLMARLATRVAKPAGQLY------IS 467 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 E+ + + LPV + G+G + +KL I+T L I+K E T Sbjct: 468 AEKVEEFLDQLPVGTLPGVGSVLKEKLVKQNIQTCGQLRLISK--IKKRKKDAEEPTKYM 525 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G C L S + D +++ ++ R + Sbjct: 526 GCG-DCDNL----------SRSITVPAATDDIEVLQRISKKLFGSFCLDVKE----VRGV 570 Query: 289 STFIKTSPFALNEPYYGNSASVK 311 + S +P S ++K Sbjct: 571 GLQV--SKLDSADPSNKGSRTLK 591 Score = 55.5 bits (133), Expect = 4e-06, Method: Composition-based stats. Identities = 14/121 (11%), Positives = 32/121 (26%), Gaps = 19/121 (15%) Query: 254 GERITDYPSMRQAICSY--------AARAAEKLRSEH-QYCRFIST--FIKTSP------ 296 G+ + + + + EKL ++ Q C + IK Sbjct: 462 GQLYISAEKVEEFLDQLPVGTLPGVGSVLKEKLVKQNIQTCGQLRLISKIKKRKKDAEEP 521 Query: 297 --FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + S S+ + T D + + + + + G+ + S Sbjct: 522 TKYMGCGDCDNLSRSITVPAATDDIEVLQRISKKLFGSFCLDVKEVRGVGLQVSKLDSAD 581 Query: 355 V 355 Sbjct: 582 P 582 >UniRef50_Q9VHV1 DNApol-iota, isoform A n=12 Tax=Drosophila RepID=Q9VHV1_DROME Length = 737 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 72/411 (17%), Positives = 127/411 (30%), Gaps = 71/411 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++ FYA E + P L K + + V+ N A+A GV + + + Sbjct: 17 IIHLDMDYFYAQVEEIRDPTLRSKALGI--QQKNIVVTCNYVARAKGVTKLMLIAEAQRI 74 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL----- 116 +V + Y MS R+ L +P VE DE F D+T + R Sbjct: 75 CPDLVLVNGE-DLAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTALVELRQAHVAEA 133 Query: 117 -------------------------------TDFGREIRATVLQRTHLTVGVGIAQTKTL 145 T +EIR + R +T GIA K L Sbjct: 134 LLRPPVGHTYPADGTPLSNCDCGCAQRLAIGTRIAQEIREELKLRLGITCCAGIAYNKLL 193 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD 205 AKL + + Q+ V+ + E+ + + L V GIG++ L G+ +V Sbjct: 194 AKLVGSSHEPNQQT---VLVSTYAEQFMRELGDL--KRVTGIGQKTQCLLLEAGMSSVEQ 248 Query: 206 LADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 L D+ +RK F R G + + + I + + I+ + Sbjct: 249 LQQCDMDVMRKKFGFETATRLRDLAFGRDTSLVRP-SGKPKTIGMEDAC-KPISVRTDVE 306 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT-------- 316 + R E++ + + I+ + F + + P+ Sbjct: 307 ERFRMLLKRLVEQVAEDGRVP--IAIKVVLRKFDSQKKSSHRETKQANILPSLFKTSMCP 364 Query: 317 ------------QDSRDIINAATRSLDAIWQAGHR--YQKAGVMLGDFFSQ 353 ++ R + I G+ F + Sbjct: 365 GETGVSKVQLADGAQDKLLKIVMRLFERIVDMSKPFNITLLGLAFSKFQER 415 >UniRef50_B4VAW5 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4VAW5_9ACTO Length = 352 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 62/317 (19%), Positives = 116/317 (36%), Gaps = 21/317 (6%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDFGREIRATVLQRTHLTVGVGI 139 ++++ E ++PRV+ D A D+TG RD +R + + + Sbjct: 23 AQLLAIAEGITPRVQAIEPDAAHLDITGALRYWQRDPEGVAALLRLRTMALHGVQTTCAV 82 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A + LA +A G+ + + + PV ++GIG + KL G Sbjct: 83 APNRMLATMA------AAATPPGMTTVIYTGDVERWLRPRPVAALYGIGPATAAKLRTYG 136 Query: 200 IKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 + T+ D+A+T + + + F R G+ ++ P + + R+F Sbjct: 137 LHTIGDVAETPLPTLVRLFGASAGRSLQAHAHGQDPRTVQTQ-PIAKSLAADRAFEHDAL 195 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 D R+ + A A +LR Q ++ ++ + ++ L T Sbjct: 196 DPAEHRRTLLDLAEEVAARLRDGQQAAGGLALSVRYAD------RSTSTRRRTLAEATAH 249 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QGVAQLNLFDDNAPRPGSEQLMTV 376 +R I A D + R + G+ D + QL L +A + + V Sbjct: 250 TRPIATTAYELYDLLALQRARVRAIGLRAHDLRPSSEATQQLTL---DAGDDRALAIEAV 306 Query: 377 MDTLNAKEGRGTLYFAG 393 D A+ G GT+ A Sbjct: 307 TDRARARYGTGTIRPAA 323 >UniRef50_A4EK23 DNA polymerase IV-AMBIGUITY n=3 Tax=Rhodobacteraceae RepID=A4EK23_9RHOB Length = 452 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 90/410 (21%), Positives = 147/410 (35%), Gaps = 34/410 (8%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D ++F+A+ E F P L G+PV V+ + IA + EAKALGVK + Sbjct: 21 LYLDFDSFFATAEQHFNPALRGRPVGVVPLDSPHTGCIAISREAKALGVKSMARIADTRR 80 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + ++ + +++Y + NR++ + + P + SIDE C L Sbjct: 81 IVP--DMIFVVARHDVYVRLHNRIVDVVNTVVPVAHVRSIDEVVCHLLPSEAREG-RALA 137 Query: 121 REIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+A + LT +GIA T+ LAK+ A K L L ++ Sbjct: 138 DRIKAALAAAFSPELTCSIGIAPTELLAKIGAEAHKPDG------FALIELADLPASLAH 191 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQL 237 + +DD+ G+ + K+L A G+ L + R + +V ER EL G+ +L Sbjct: 192 IALDDLPGVSDGMEKRLQAAGVTDFQSLWALAPKQARAIWRSVEGERFWNELHGQHAERL 251 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---- 293 K+ SR + A AA +LR ++ K Sbjct: 252 ---PTQKRMFGHSRMLPADWRTPQKVTICARQLALGAARRLRRADLRATKLTLGFKGGGY 308 Query: 294 ---TSPFALNEPYYGNSASVKLLTPT-QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 + + + PT D + A A G + VML Sbjct: 309 RGRSGSRKDDLRWDWEGH----FLPTRDDHTVLATLAQGLDAAQRAVGFPPRSVSVMLHG 364 Query: 350 FFSQGVAQLNLFDDNAPRP-----GSEQLMTVMDTLNAKEGRGTLYFAGQ 394 + +LF E + +MDTL + G + GQ Sbjct: 365 LIANEQMTNDLFLTPTAPEQINISRWEAVSDLMDTLRQQHGPEAISLGGQ 414 >UniRef50_C5LMV6 Dna polymerase eta, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LMV6_9ALVE Length = 945 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 82/367 (22%), Positives = 136/367 (37%), Gaps = 40/367 (10%) Query: 2 FALCDVNAFYASCETVFR---PDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWF 56 + LCD ++F+A + P+ KP+ V+S + + N A+ GV Sbjct: 496 YMLCDFDSFFACVAQLQATGVPE-STKPMAVVSGMGRGSEICSANYAARKYGVSGSMWLA 554 Query: 57 KQKDLFRRCGVVCFSSNY-ELYADMSNRVMSTLEELS----PRVEIYSIDEAFCDLTGVR 111 + K L V +S +++ + + RV S+DEA D++G Sbjct: 555 EVKALCPDLEKVPVTSELLTQCNTAWKQMLRLMAVVGGGTLDRVVAKSVDEAIVDVSGEC 614 Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 D + ++ V Q T L VG+A + LAK+A AK + Sbjct: 615 GYSDEAAVAQALQKAVTQATGLPCSVGVADSHVLAKVATTQAKPRGIKVL---------N 665 Query: 172 QRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIR-FIRKHFN-VVLERTVRE 228 + ++ LP+ + +G R KL + G+ T+ DL D +I + F ER + Sbjct: 666 DKSFLADLPLHMLPQVGYRTLGKLQNEFGLATIGDLLDPNIAPLLADSFGAKTAERMLTN 725 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 RGE + + ++FG R S RQ + + A+ L E + Sbjct: 726 ARGEDYR--NDLVTDISTVSADKNFGIRNVTPESARQLVRALVAQVMPLL--EGLVPERV 781 Query: 289 STFIKTS--------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRY 340 + + F Y S S + T DI A LD + HR Sbjct: 782 ILRLYLAPDDWVEPFKFMGIGACYQWSRSCAV---TPSKNDIAALAIGLLDGV--EVHRI 836 Query: 341 QKAGVML 347 + AGV + Sbjct: 837 RGAGVAV 843 Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats. Identities = 76/423 (17%), Positives = 129/423 (30%), Gaps = 85/423 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKAL-GVKMGDPWFKQK 59 + AL D++ FYA E P VV + V+A + A+ L GV+ G + Sbjct: 7 VIALFDLDCFYAQVERRRLGIPSSVPFVV--SQWDMVLAVDYSARKLPGVQRGALTSIAE 64 Query: 60 DL-FRRCGVVCFS-------SN--------------YELYADMSNRVMSTLEELSPR--- 94 + V + + Y + S VM L P Sbjct: 65 KAGAKSAHVEVVDVVTGETFPDGPPPGEPRDRYRVSLDRYREASEEVMRALRTALPESAP 124 Query: 95 VEIYSIDEAFCDLT----------------------GVRNCRDLTDFGREIRATVLQRTH 132 +E SIDE F DLT G ++ + +R V T Sbjct: 125 LERASIDEVFVDLTSLCEEEQEEQMPAGIKWAAGEVGNSALQEGAIWAERLRKEVESITG 184 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 T+ G+A + LAKLA K V + + M+ + V + G+GR Sbjct: 185 FTMSAGVASNRQLAKLACGVNKPDA------VTALSDNKILDFMAGVKVKSLRGVGRATF 238 Query: 193 KKLDAM-----GIKTVLDLA----DTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 ++++ G ++ + D + RG +E P Sbjct: 239 HDIESLLPCLTGDTKCGEIWPVLDELDPDPANAEL---VAWLKLASRGRD--PVENAKPV 293 Query: 244 KQ-------EIICSRSFGERITDYPSMRQAICSYAARAAEKLR-SEHQYCRFISTFIKTS 295 K + S+ F + + M+ I S A +++R Q+ + + + Sbjct: 294 KDSESLKAGSVSASKIFRPYLKEAAKMQFWIESLAKDVVDRVRGRAPQFPKSLCVSLGR- 352 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + S + P D I A + + + R V D Sbjct: 353 ----EATATYATKSRRCPMPALDKVII--TAQQMAAPLIASFGRVGMITVTALDLQDPPA 406 Query: 356 AQL 358 Q Sbjct: 407 HQP 409 >UniRef50_Q828V5 Putative uncharacterized protein n=3 Tax=Streptomyces RepID=Q828V5_STRAW Length = 324 Score = 211 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 61/325 (18%), Positives = 109/325 (33%), Gaps = 19/325 (5%) Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDFGREIRATVLQRT 131 +Y ++ LEE +P VE D A DL G R +F IR L Sbjct: 11 PPMYEAALPGLLGLLEEFTPVVEALPPDGALVDLRGAERYFGRGTVEFASLIRVRALAHY 70 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 + +G LA++A V + + ++ PV + G+G Sbjct: 71 GIDCAIGAGPGPMLARMALR----DAVPGVTRVVPEEPDAVAEFLAERPVVALPGVGHAT 126 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICS 250 ++ L G+ T+ +A + +++ + G ++ A ++ + Sbjct: 127 ARTLCEYGLDTLGKVAAAPLSTLQRLTGARTGRELREKASGIDRGRVVPNAVSR-SLTAE 185 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 R F D R+A+ S +LR+ Q CR ++ ++ + + S Sbjct: 186 RPFPRDEVDPSRHRRALLSVTEELGTRLRTLEQVCRTLTLTVRYAD------RSSTTRSR 239 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG--VAQLNLFDDNAPRP 368 L PT S + A R +A+ R + + QL FD Sbjct: 240 TLAEPTAHSAALTATAYRMYEALGLQRARVRAIALRAEGLSPAEDAAHQLT-FDPV--DE 296 Query: 369 GSEQLMTVMDTLNAKEGRGTLYFAG 393 ++ V D AK G + Sbjct: 297 KVRRIEEVADRARAKFGPRAIVPGA 321 >UniRef50_Q1RLS3 Zgc:136881 n=6 Tax=Clupeocephala RepID=Q1RLS3_DANRE Length = 743 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 72/435 (16%), Positives = 133/435 (30%), Gaps = 92/435 (21%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E +P+L KP VV G +IA + EA+A GV Sbjct: 8 VVALVDMDCFYVQVEQRLKPELKNKPCVVAQYKTWKGGGIIAVSYEARAHGVGRNMFADD 67 Query: 58 QKDLFRRCGV----------------------VCFSSNYELYADMS--NRVMSTLEELSP 93 + L V + S + + S M + Sbjct: 68 ARKLCPDLQVARVPEAHGKADLTHYREASVEVIEVMSRFAVIERASIDEAYMDLTASVQE 127 Query: 94 RVEIYSI---------------------------DEA-------FCDLTGVRNCRDLTD- 118 R++ S+ D + DL D Sbjct: 128 RLKNTSVQDITAQQLKNTHIQGFPTQQENTHLDRDAQRAAGLQQWLDLLSSSTESSPADL 187 Query: 119 -------FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 ++RA V + T GI+ K LAKLA K ++ + L Sbjct: 188 HLAVGALIVEQMRAAVEEHTGFRCSAGISHNKVLAKLACGLNKPNRQ------TVLPLSS 241 Query: 172 QRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFN-VVLERTVREL 229 +L S LP+ + +G ++ + + + ++ + DL + +HF Sbjct: 242 VPQLFSTLPISKIRNLGGKLGSSITETLSVENMGDLTRFSRAQLEQHFGDKTGPWLYDLC 301 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEKLRSE----HQ 283 RG ++ + I CS++F + + ++ + A E+L + + Sbjct: 302 RGIEFEPVKPRQLP-KSIGCSKNFAGKTCLRTKQQVQYWLHQLALELEERLNKDRDVNGR 360 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTP-----TQDSRDIINAATRSLDAIWQAGH 338 R ++ ++ + + S L+ T DS II + + Sbjct: 361 VARQLTVGVRQA---GGQRSGSFSRCCALVRYDAMKMTNDSLTIIKSLNTAGAHQEAWSP 417 Query: 339 RYQKAGVMLGDFFSQ 353 + F Sbjct: 418 ALTLLHLSASKFSDA 432 >UniRef50_C3ZXE4 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3ZXE4_BRAFL Length = 488 Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats. Identities = 77/414 (18%), Positives = 131/414 (31%), Gaps = 63/414 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPV----VVLSNNDGCVIARNAEAKALGVKMGDPWF 56 + DV+ FYA E + P L KP+ +V C I V Sbjct: 4 VIVHIDVDCFYAQVEMIRDPSLRDKPLDGGKMVSFLQVFCDITCGY----FCVHFIINLQ 59 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV------ 110 + K + + Y +V +TL++ SP VE DE F D+T Sbjct: 60 QSK--VP----ITNDKQTDEYVTYPFQVTNTLQKFSPLVERLGFDENFVDVTETVEARVK 113 Query: 111 ----------------------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 + + EIR + +T GIA K LAKL Sbjct: 114 SAFSPQLNGHIFPEIEIEDERHKRLACGSQIAAEIREALHSDLGITCCAGIAHNKLLAKL 173 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSALP-VDDVWGIGRRISKKLDAMGIKTVLDLA 207 K Q+ + KLM L ++ GIG R K+L +GI TV +L Sbjct: 174 VAGQHKPNQQTSLL------PGGVGKLMGTLKTARNIPGIGSRTFKRLQTLGISTVQELQ 227 Query: 208 DTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 D ++ F + + RG + P Q I SF ++ + ++ Sbjct: 228 DAPADTLQAEFGSQTAQVMQQLCRGVDPSPVTPTGPP-QTISDEDSF-KKCGSFQDAKKR 285 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP---TQDSRDII 323 + ++L+ + ++ + ++ A N+ S + + TQ I Sbjct: 286 MTGLLQSLMKRLKGDGRFPHVLRVTVRKLS-ASNKWTNRESRQCAIPSHLFGTQAEETIS 344 Query: 324 N---AATRSLDAIWQAGHRYQ--KAGVMLGDFFSQGVAQLNL--FDDNAPRPGS 370 + H + + ++ ++ F N P Sbjct: 345 KLLDLCVVLFCKMVDVNHPFHLTLINICFAKLEARSKQSASIKNFFQNEPTSAQ 398 >UniRef50_UPI000192707B PREDICTED: similar to predicted protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI000192707B Length = 850 Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 54/259 (20%), Positives = 102/259 (39%), Gaps = 20/259 (7%) Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 D+ D +IR + + T T GIA+ LAKLA AK D+ + Sbjct: 1 DVYDLAEKIRKDIFEETKCTASCGIAENILLAKLATKQAKPNGVCYIQKCDV------PE 54 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEP 233 +++ V ++ GIG S+KL ++ I T DL + F++K F + E RGE Sbjct: 55 FIASQKVCNLPGIGAIYSEKLSSLSILTCADLQKFSLFFLKKEFGQKLGEMLYNFCRGED 114 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF-- 291 L+ + ++ + ++G R + + + I + + +L + + I+ Sbjct: 115 SRTLKLY-EERKSVSAEINYGMRFSSMKEVEEFIDQLSKQVEVRLTEAEKKGKLITLKMM 173 Query: 292 IKTS------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 I+ + + S S+ + +PT S I + L + G+ Sbjct: 174 IRQKGEGNPLKYMGHGLCDNVSKSIMISSPTNSSELISRYCLQLLHLFTVIAQDIRGIGI 233 Query: 346 MLGDFFSQGVAQ---LNLF 361 + S + Q ++LF Sbjct: 234 QVTKL-SDNIIQNKAVDLF 251 >UniRef50_UPI000180C75E PREDICTED: similar to polymerase (DNA directed), eta n=1 Tax=Ciona intestinalis RepID=UPI000180C75E Length = 785 Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 71/428 (16%), Positives = 129/428 (30%), Gaps = 91/428 (21%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY E L GKP V+ N G +IA + EA+ GV Sbjct: 16 VVVLVDMDCFYVQVEQRRDSSLKGKPCAVVQYNQWKGGGIIAVSYEARDEGVTRNMRGDD 75 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT---- 108 K + ++ Y D V+ L + VE S+DEA+ DLT Sbjct: 76 AKAKCPEIILCKVPMANGKADLTRYRDAGAEVIQVLLQFGGVVERASVDEAYIDLTSVVD 135 Query: 109 -------------------------------------GVRNCRD-------------LTD 118 G+ RD Sbjct: 136 ASMKEKRILPDLEQMGNTYVVGYPKDSCDDTTNARESGLSAYRDSANSDPDAERLLVAAA 195 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++R + Q+T GI+ K L+KL+ K ++ + L Sbjct: 196 IVEKMRLAIYQQTSFRCSAGISHNKMLSKLSCGINKPNKQ------TILPFNMVAGLFQT 249 Query: 179 LPVDDVWGIGRRISK-KLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 + + + +G ++ K + G++ + L + + + F G Sbjct: 250 IKIGKIRNLGGKLGKEIMFRFGVEKIGHLTNQTKQHLVDGFGEKTGLWLYEVCHGIDHEP 309 Query: 237 LEEFAPTKQEIICSRSF-GER-ITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS--TFI 292 ++E Q + CS++F G + ++ + E+L + Q +S I Sbjct: 310 VKE-RHVAQSVGCSKNFTGNDALGSRNKVKHWVRCLTTELVERLNKDKQMNNRVSHALTI 368 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH--------RYQKAG 344 S + + D DI +L+ + + G Sbjct: 369 H------IGIKKPISRTCPISRY--DVDDITMRCLATLETLNTNQDKESDTWSPKITNIG 420 Query: 345 VMLGDFFS 352 + +F S Sbjct: 421 ISAKNFQS 428 >UniRef50_Q4DBR5 DNA damage repair protein, putative n=4 Tax=Trypanosoma RepID=Q4DBR5_TRYCR Length = 615 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 63/460 (13%), Positives = 131/460 (28%), Gaps = 97/460 (21%) Query: 1 MFALCDVNAFYASCETV--FRPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 +F D++AF+ S + KPV + + + + N A++ GV+ G Sbjct: 64 LFVHLDMDAFFCSVVLAKEENAHMREKPVCIAAGKGNSDISSSNYIARSFGVRAGMYVNA 123 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-----VEIYSIDEAFCDLTGVRN 112 K+L + S + ++ + L EL P VE+YSIDE N Sbjct: 124 AKELCP--NLQVLSYDLPRCEEVIKCLYRLLFELCPDKVCIAVEVYSIDEVMIAF-DTEN 180 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + + + + T+ T GI L+++A AK + + Sbjct: 181 HDVVKSYCANVLRQLELTTNCTASCGIGPNIMLSRIATQYAKPNGVYS------ILPQDV 234 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAM--------GIKT----VLDLADTDIRFIRKHFN- 219 +L+ +P ++ G+G KL + I + + +++ Sbjct: 235 PELVGHMPFVEIHGVGSCTMTKLRPLLRPYLKDADISDDDILCCHVQKLSKQQLQRALGQ 294 Query: 220 VVLERTVRELRGEPCLQLEEFAPT-------KQ---EIICSRSFGERITDYPSMRQAICS 269 E RG Q+ K+ + CS ++ R + + Sbjct: 295 KSGENFFHLCRGHDTRQVSRTGDEENQRMLGKKTPTSVSCSMNYAVRPLTLDDVWGILRE 354 Query: 270 YAARAAEKLRSEHQYCRFISTFI--KTSPF-ALNEPYYGNSASVKLLTPTQDSRDIINAA 326 K+ + + + + + G V+ P + + ++ Sbjct: 355 LLEVVCGKMDRGGYTSSGLRVTLLERHPLHPKETQKFMGRGRCVEFHVPINFEKPLRSSE 414 Query: 327 TRSL---------------DAIWQAGH-----------------------------RYQK 342 + + + Sbjct: 415 LELMLSQVKDVVTPLFVLDRQMSDEERARELGLEDDAESRVIWTVSLKTVKDIVISDIRG 474 Query: 343 AGVMLGDFFSQGVA----------QLNLFDDNAPRPGSEQ 372 V +QG A QL+LF+ + ++ Sbjct: 475 MTVQATGLHAQGGAVTEWKSTSGGQLSLFNAFSRGNKRKR 514 >UniRef50_A7AX68 ImpB/MucB/SamB family protein n=1 Tax=Babesia bovis RepID=A7AX68_BABBO Length = 1246 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 51/396 (12%), Positives = 132/396 (33%), Gaps = 49/396 (12%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVV----LSNNDGCVIARNAEAKALGVKMGDPWFK 57 D++AF+ S + L P+ + N+ + N A+ GV G Sbjct: 432 IFHIDMDAFFVSVAIKGKQHLKNMPLCISYGTGRNSASEIATCNYAARVYGVSKGMWVRD 491 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 L + ++++ D + +++ E++ ++ S DE + + + D+ Sbjct: 492 AVQLCPS--LQFVKYDFDVINDTAMKILKIASEVTNKIYSASCDELYLEYSIESESNDIV 549 Query: 118 DF---GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK--KWQRQ--TGGVV---DLS 167 ++ + + T + +GI LAKLA+ K K + G V ++ Sbjct: 550 EYISMAVNLAHKIETETECPLSIGIGDNMMLAKLASQRCKALKHGSEEVPTGYVLSGNVC 609 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTV 226 ++ ++++ + ++ G+G R L + G D+ D +++ + + Sbjct: 610 AIQDVEAFIASVSLHELPGVGDRTLDILKSCGYVYCSDI--HDKEELKELIGEKLGDTVY 667 Query: 227 RELRGEPCLQLEEFAP-----TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 RG+ + + I + ++G RIT + + + + +++ + Sbjct: 668 HFSRGKDFRNMNTAEARSRILKNKTITSAINYGVRITTTEQVHEYMRELVKQVWDRVEAA 727 Query: 282 --------------HQYCRFISTFIKT---------SPFALNEPYYGNSASVK--LLTPT 316 I ++ + + ++SV L++ Sbjct: 728 LTHLKEESTDNNSLEVPVAQIMLKVRVRSPEASVEPAKYMGCGLCDEFTSSVSGDLMSQK 787 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 R +++ A + + + Sbjct: 788 SVFRSLLSCWQNLFAKKPFALEDLRGISLGIYRIKK 823 >UniRef50_O17219 Polh (Dna polymerase eta) homolog protein 1, confirmed by transcript evidence n=3 Tax=Caenorhabditis RepID=O17219_CAEEL Length = 584 Score = 206 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 73/444 (16%), Positives = 140/444 (31%), Gaps = 99/444 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALGVKMGDPWF 56 + +L D++ FYA E P LWG+PV+V+ ++ G ++A + EA+ GVK G Sbjct: 4 VISLIDMDCFYAQVEQRDNPSLWGQPVIVVQHSRQGIEGGILAVSYEARPFGVKRGMTVA 63 Query: 57 KQKDLFRRCGVVCFS-------SNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDL 107 + K + + ++ + Y D S V L +E S+DEAF DL Sbjct: 64 EAKLKCPQISICHVPIGEYVDKADIQKYRDASAEVFRVLNNYDSQIIIEKASVDEAFLDL 123 Query: 108 TGV--------RNCRDLTDFGR---------------------EIRATV----------- 127 + R L +F + +R V Sbjct: 124 SAYTNQKLQELRENEGLEEFLQAAITYLPTTHLATGEDVKENEHLREDVLLEYIENARNC 183 Query: 128 --------------------LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + T G+ K +AKL K Q+ L Sbjct: 184 TENLLLLIAAVTVEQIRQQIHEETQFFCSAGVGNNKMMAKLVCARHKPRQQ------TLI 237 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAM-GIKTVLDLADTDIRFIRKHFNVVLERTV 226 R+++ P+ DV G G ++ ++ M I + +L + DI + + F E Sbjct: 238 PWFYVREILRLTPIGDVRGFGGKMGNRIQEMLNITLMGELLEVDISQLIETFPNQHEYLR 297 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP--SMRQAICSYAARAAEKLRSEHQY 284 G + I S++F +++ +++ + A++L ++ Sbjct: 298 SVAEGHCDEPVRP-RKESSSIAVSKNFPGKLSIRSVLELKKWLDGLTKELAKRLATDQAE 356 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH------ 338 + + + S + L + + ++ + + Sbjct: 357 NKRTAENLVYSLLTEDGKP-----QKTLKITSYHPDTLFEQIWAAMKGLNKTNATKNEDS 411 Query: 339 -----RYQKAGVMLGDFFSQGVAQ 357 + F AQ Sbjct: 412 GPWTPPILNISLSATRFQPGIPAQ 435 >UniRef50_A3VTP3 ImpB/MucB/SamB family protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTP3_9PROT Length = 453 Score = 203 bits (518), Expect = 9e-51, Method: Composition-based stats. Identities = 83/402 (20%), Positives = 153/402 (38%), Gaps = 39/402 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQK 59 + D NAF+A+ P L G+PVV+ + IA + EA+ G++ G + + Sbjct: 13 YLYIDFNAFFAAAAQHDEPALAGRPVVITPHRSEYSSAIAVSYEARPFGIRRGTKIREAR 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L V + ++ Y + ++ +E + P ++YSIDEA L + D Sbjct: 73 HLCP--AVAVRPARHDRYIRLHKELIGAIETVLPLGKVYSIDEATFRLDRTQASPDRARI 130 Query: 120 -GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +++ + R +GIAQT LAKLA K + + +E + Sbjct: 131 QAEAVKSVIADRIGPSFRNSIGIAQTPLLAKLAAGLQKPDG------LTVLMMEDLPGRL 184 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCL 235 S+L + D+ GIG ++++L+ G+ + L + R + +V ER G Sbjct: 185 SSLALSDLPGIGPNMAQRLERSGVTNIDALWALAPKQARAIWRSVQGERFWYAFHGY--- 241 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ E A K + SR + R + +AA +LR+ + ++ +K Sbjct: 242 EVPEPATKKGMVGHSRVLTSGLRTAKGARPVARALLLKAAARLRAMDRLATRLTLTLK-- 299 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK------AGVMLGD 349 +E + + T + + A R + + ++ + L Sbjct: 300 ----DEQGRKIAFEERFDLSTDST-TFLRALDRLWERALEQVPELRRGARLGSVSIFLHG 354 Query: 350 FF---SQGVAQLNLF------DDNAPRPGSEQLMTVMDTLNA 382 Q +LF D P +L +D LNA Sbjct: 355 LVGEGDAEARQGSLFDGPIEADPEEADPKRARLWAAIDRLNA 396 >UniRef50_C3RLA4 DNA polymerase IV n=4 Tax=Bacteria RepID=C3RLA4_9MOLU Length = 250 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 102/260 (39%), Gaps = 17/260 (6%) Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 +A+ K + + +++M L + D++GIG++ KL A+GI T+ D+A Sbjct: 1 MASDMKKPMG------ITILTRSNLKEIMWPLDIKDMFGIGKKTQPKLKAVGINTIGDIA 54 Query: 208 DTDI-RFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + D +R+ R+ G ++ + + S + D +R Sbjct: 55 NYDNYNKLRQIIGKNALLLYRKANGIDNSAVDAKQNELKSVGNSTTLPYDTNDEEILRDT 114 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + S A + + + + IS IK + F + + + D I++ A Sbjct: 115 LKSLARQVSARANKRNLISNSISITIKYTRFE------SVTRQTTVNSFINDYETILSTA 168 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQG--VAQLNLFDDNAPRP-GSEQLMTVMDTLNAK 383 DA + +G + G+ L + ++ QLN+F+ + L +++ +N K Sbjct: 169 KMLFDANY-SGRPVRLLGISLNNTINKKNYKEQLNIFEMAQEDETNDDSLEQLLNAINNK 227 Query: 384 EGRGTLYFAGQGIQQQWQMK 403 + + A ++ Q K Sbjct: 228 FDKKLVTKASSFAKKTPQKK 247 >UniRef50_A4I3M2 DNA polymerase kappa, putative n=2 Tax=Leishmania RepID=A4I3M2_LEIIN Length = 409 Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats. Identities = 57/396 (14%), Positives = 103/396 (26%), Gaps = 73/396 (18%) Query: 9 AFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCG 66 FYA+ E P L +P V S D + + G P F K L Sbjct: 1 MFYAAVEERLDPSLRERPFAVGSYATADHNQLHCS----------GTPGFMAKKLCPS-- 48 Query: 67 VVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR---DLTDFGREI 123 + +++ + + V + P +DE D+T D E Sbjct: 49 LWTRPPHFDRHRREAANVRAIGALYDPHYVAVGLDELTMDVTDYLRTHQDCSAEDVCAEF 108 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 R V T T GIA T AK+A++ K + ++ L E + +PV D Sbjct: 109 RRRVEAATQPTCSGGIAHTPAFAKVASNVNKPNGQH---ILTLRTREEVLAHVRDMPVRD 165 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC--------- 234 V GIG ++L A+G+ T D + G Sbjct: 166 VPGIGFATEQRLHALGVVTCKDFLTHKAELCYLFREKTFAFYLSVGLGLVRANVNRSNAE 225 Query: 235 --------------------------------------LQLEEFAPTKQEIICSRSFGER 256 + ++ + Sbjct: 226 REAVTAPPSAAAAMKPSSAAHLKSRLSRALASPSPSALRAVVPDHRAQKSTRKCTTLACG 285 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 + + + A + L + + + + + + S + L T Sbjct: 286 VPICEAFWYHLRQLTQGAHDVLMKQGAGTKHV------CFYTTSRAFVSRSHAAMLSEAT 339 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + + + ++ GV Sbjct: 340 NSFAKLYAGLEKVAEPFAARHREFRLIGVKFSKLQP 375 >UniRef50_A7I053 DNA-directed DNA polymerase n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I053_CAMHC Length = 299 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 120/313 (38%), Gaps = 22/313 (7%) Query: 83 RVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 ++ L +P +E YSIDE F DL+G+ F ++ +L+ +L V +GI+ Sbjct: 6 KLYKFLYTFTPDIEQYSIDEFFLDLSGINVKNGHLKFAEFLQNEILKIFNLPVSIGISDA 65 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 K +AKLA AK + + + N + + + + G+G+ + K+L+ +GI T Sbjct: 66 KYIAKLATDLAKPFGIK------MINSDELDSTLKNVDIVKFPGVGKSMLKRLNKLGIFT 119 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 + D+ ++FI + F + + G L+ ++ SR+F + + D Sbjct: 120 LGDVKK--VKFIFEKFGKNGIKLYENITGTGDNLLQ-INKKRKSFSHSRTF-KAVFDRNE 175 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 +++ I + Q I+ S S + + + Sbjct: 176 IKRRILILCRYICFDVYKFGQNPTNYELKIRYSD----RITLSGSITYRNKFY---ENVL 228 Query: 323 INAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 + V +G+F ++ NLF + + ++ + + Sbjct: 229 HEIMNDLFIKCDKFETKSIIYISVCVGEFTNRAEQ--NLFSEMKQN--NTEIDKAVHKIR 284 Query: 382 AKEGRGTLYFAGQ 394 K G +L FA + Sbjct: 285 EKYGIDSLLFAKE 297 >UniRef50_A8BDY9 DINP protein human, muc B family n=2 Tax=Giardia intestinalis RepID=A8BDY9_GIALA Length = 675 Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 62/390 (15%), Positives = 124/390 (31%), Gaps = 68/390 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A+ D + FYAS E P L GKPV++ V N A+ GV+ P K Sbjct: 89 VIAVLDFDCFYASIEERDNPSLRGKPVIITGG--SIVCTSNYAARKYGVRSAMPTHVAKA 146 Query: 61 LFRR-----------------CGVVCFSSN------------------YELYADMSNRVM 85 L + V + + YA V+ Sbjct: 147 LCKDVIAIPASMEKYMSVSHAAAEVFAGYDTHYSMHGLDECVFNLTAYMKQYAHERYGVV 206 Query: 86 STLEELSPRVEI-----YSIDEAFCDLTGVRNCRD------------LTDFGREIRATVL 128 + + S D L V++ + IR + Sbjct: 207 DMWSAYAHLDKQCADGALSTDADSIPLPAVQHTNTLFKEKPGFIELLAAEVVSAIRKDIA 266 Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER---QRKLMSALPVDDVW 185 R +T VG+A + +AK+ K + G + ++ + L + +W Sbjct: 267 SRLGITCSVGVAINQQVAKILTELNKPDGQTIGPLHTVTQDNYSTILHSHLKDLHIRKIW 326 Query: 186 GIGRRISKKLDA--MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ--LEEFA 241 G+G ++ L I ++ D+ + + G +Q ++ Sbjct: 327 GVGDASAQLLSREPFMITSIGDIFLKRGLLSLLLTPAQAKFYIFASVGLSSVQQLMDPNN 386 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 P + + +F E +D ++ + + A+KL+ ++ ++ ++ + Sbjct: 387 PNPKSVGQECTFPE-TSDEDVLKNILRNLCKLIAQKLQEQNLVPTRLNVKVRFAD----- 440 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + + V L + D + AA +L Sbjct: 441 -WIEKTHVVDLSRHSWDLDVLYLAALEALR 469 >UniRef50_B9Q7A7 Terminal deoxycytidyl transferase rev1, putative n=3 Tax=Toxoplasma gondii RepID=B9Q7A7_TOXGO Length = 2497 Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 96/287 (33%), Gaps = 48/287 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC---------VIARNAEAKALGVKMG 52 D +AF+ + RP L PV V + V + N A+A GV G Sbjct: 768 ILHVDFDAFFVAVALKKRPHLKNFPVAVAHSRGSGGKAASSTSEVASCNYTARASGVYKG 827 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL----- 107 + K+ G++ +++ + S + + + +LS R+ S DE + L Sbjct: 828 QWLGEAKERCP--GLITLPYDFDGIEEASEGLFACVLQLSRRILPVSCDETYVQLLLAPR 885 Query: 108 -------TGVRNCRD--------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA 152 T + D E+R + +RT V +G AKLA Sbjct: 886 NGESNEETEGLADGSESGEAEKAILDACVELRQRIFERTGCWVSIGAGPNLLAAKLAGLQ 945 Query: 153 AKKWQRQT-----------GGVVDLSNLERQR-KLMSALPVDDVWGIGRRISKKLDAMG- 199 AK + GV + E M +P+ + G+G + +K++ G Sbjct: 946 AKPKASSSSSSSSSSSLSRDGVCVIRPRESFLWAFMDQVPLRKLPGVGSMLGEKVEKAGR 1005 Query: 200 IKTVLDLAD---TDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAP 242 ++ + +R ++ G L F+P Sbjct: 1006 LRLCGQVMKEGIRSLRVLQNLLGRKRGAMIWWMAHGCDPRPLPPFSP 1052 Score = 43.5 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 9/54 (16%), Positives = 20/54 (37%) Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 P+ + + S ++G R+ + + A A ++LR + I Sbjct: 1194 TVIPSSRSLTISVNWGIRLHAEREVFDLLRQLAGEAHKRLRMHRLVAPRLGLKI 1247 >UniRef50_C4ZE13 DNA-directed DNA polymerase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZE13_EUBR3 Length = 341 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 12/184 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D+N YAS E + P+L GKP+ V + G V+ + AK GVK G ++ Sbjct: 11 VILHSDINCCYASIEHLHHPELAGKPLAVGGDPEARHGIVLTADYIAKKYGVKTGMALWQ 70 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDL 116 K++ + S +LY S E + R E Y IDE + D+TG + D Sbjct: 71 AKEVCP--DITFVSPRMDLYLRFSRMAHEIYAEYTDRQEPYGIDECWLDVTGSSSLKGDG 128 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +EI + +TV VG++ K AKL + + G + L ++ Sbjct: 129 LLIAQEISRRMKSELGITVSVGVSFNKIFAKLGSDY------KNGCYLILIQNRCMKQKF 182 Query: 177 SALP 180 LP Sbjct: 183 LDLP 186 >UniRef50_B9SQ81 DNA polymerase eta, putative n=1 Tax=Ricinus communis RepID=B9SQ81_RICCO Length = 560 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 69/436 (15%), Positives = 121/436 (27%), Gaps = 119/436 (27%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E +P L G P V+ N G +IA + EA+ GVK + Sbjct: 13 IIAHVDMDCFYVQVEQRKQPQLRGLPTAVVQYNEWKGGGLIAVSYEARKFGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT---- 108 K++ + +V ++ +Y + + V+S L R E SIDE + DLT Sbjct: 73 AKEVCPQILLVQVPVARGKADLNVYRNAGSEVVSILARKG-RCERASIDEVYLDLTDSAE 131 Query: 109 ------------------------------GVRNCRDLTDF------------------- 119 G D+ ++ Sbjct: 132 AMLKDTPPNSLDVIDDEVLKSHVLGLKNENGNDAKEDVREWLCRNDADHRDKLLACGAII 191 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 E+R VL+ T T GIA K + K+ + G + Sbjct: 192 VAELRMQVLKETEFTCSAGIAHNKMDCNILFDCRKQLGGKLGSSLQ-------------- 237 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 + +G+ TV DL ++ + + RG +++ Sbjct: 238 ----------------NELGVDTVGDLLQFSEEKLQDRYGINTGTWLWNIARGINGEEVQ 281 Query: 239 EFAPTKQEIICSRSF--GERITDYPSMRQAICSYAARAAEK----LRSEHQYCRFISTFI 292 + +SF + + S++ + +E+ L + ++ Sbjct: 282 -GRLLPKSHGSGKSFPGPQALKTIASVQHWLNQLCEELSERLCSDLEQNKRMAHTLTLHA 340 Query: 293 K-TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA---------------IWQA 336 + S S L T I A A Sbjct: 341 SAYKSSDSDSHKKFPSKSGPLRYGTA---KIQEDAFNLFQAGLREYLGAHGVKVLGSHHN 397 Query: 337 GHRYQKAGVMLGDFFS 352 G V Sbjct: 398 GWGITGLSVSANKIID 413 >UniRef50_C0SPA8 DNA repair protein homolog yobH n=15 Tax=root RepID=YOBH_BACSU Length = 217 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 82/217 (37%), Gaps = 6/217 (2%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I++++ + L VGI L+KLA K + G+ + +L Sbjct: 1 MAKAIQSSMWREFGLMCTVGIGDNMLLSKLALDLESK--KTKSGIARWRYEDVPNRLWKV 58 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ +WGIG R+ + L+ MGI TV LA + + K F ++ + G ++ Sbjct: 59 RPLSKMWGIGGRMERNLNRMGISTVGQLAKFPLELLEKKFGIMGNQLYYHAHGIDLSEIG 118 Query: 239 EFAPTKQ-EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 Q S+ T ++ + A + R+ ++ R IS I S Sbjct: 119 APLMQGQISFGKSQILFRDYTKREEIKAVLLEICEEVARRARTYNKVGRTISLGIGYSK- 177 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 +E G S + PT + DI + + Sbjct: 178 --DELGGGFHRSKTIDFPTNITMDIYKCCLMFFNKFY 212 >UniRef50_C0WP28 Possible DNA-directed DNA polymerase n=3 Tax=Lactobacillus RepID=C0WP28_LACBU Length = 327 Score = 192 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 13/240 (5%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLS----NNDGCVIARNAEAKALGVKMGDPW 55 +F L D +FYASCE V R + P+VVLS N G ++A + EAK L + Sbjct: 11 VFFLIDNKSFYASCEAVQRGFNPLKIPLVVLSEQENTNGGLILATSPEAKRL-FHLKANV 69 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNC 113 +Q++L + + LY + ++ E + V YSIDE+ D+T Sbjct: 70 SRQRNLPQDPRLCVVPPRMNLYIKRNLQINQIFTEFASEQDVWPYSIDESIVDMTHSWKL 129 Query: 114 RD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + R I+ TV +R L VGI AK+A K + G ++ Sbjct: 130 FGDTPREVARVIQKTVRKRLGLYTTVGIGDNPVQAKIALDVYAKHTPELIG--EIHYETV 187 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + + DVWGIG+R +K L+ +GI + LA T+ ++K + V+L G Sbjct: 188 PKTIWPINNLTDVWGIGKRTAKHLNRLGIHNMYQLAHTNPYLLKKKW-VLLVNNYLRRHG 246 >UniRef50_UPI0001B4E7CA hypothetical protein SvirD4_08371 n=2 Tax=Streptomyces RepID=UPI0001B4E7CA Length = 482 Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats. Identities = 50/281 (17%), Positives = 98/281 (34%), Gaps = 14/281 (4%) Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDFGREIRATVLQRTHLTVGVGIAQ 141 ++ LEE +P V+ D A DL G RD + IR L + +G Sbjct: 21 LLGMLEEFTPVVQALPPDGALADLRGAERYFRRDAVELASVIRVRSLALHGVDCVIGAGP 80 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK 201 LA++A A + + ++ PV + G+G ++ L G+ Sbjct: 81 GPMLARMALRDAAP----GVTRTVPDEPDAIAEFLADQPVAALPGVGTATARTLGDYGLD 136 Query: 202 TVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 T+ +A + +++ + G ++ A + + R FG + Sbjct: 137 TLGRVAAAPLSTLQRLIGAKPGRELREKANGVDRGRVVPNAVAR-SLATERPFGRDELNP 195 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP------FALNEPYYGNSASVKLLT 314 R+A+ S A +LR+ + CR ++ ++ + + + S L Sbjct: 196 ERHRRALLSAAEEIGARLRALEKVCRTLTLTMRYADLPHSRTGSSGGTPIATTRSRTLTE 255 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 PT S + AA +A+ R + + + Sbjct: 256 PTAHSPALTRAAYGMYEALGLQRARVRAIALRAEGLDPKKP 296 >UniRef50_B0NK47 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NK47_EUBSP Length = 290 Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 44/249 (17%), Positives = 88/249 (35%), Gaps = 7/249 (2%) Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV 220 + L +R L S P+ D W +G I+++L++ GI T+ D+A D + + F + Sbjct: 37 DHIGILEEESYKRTLWSHRPLTDFWRVGSGIARRLESAGIYTMEDIAKADEDMLYRMFGI 96 Query: 221 VLERTVRELRGEPCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 E + G ++ + P + I S+ G D+ R A K Sbjct: 97 DAELLIDHAWGRETTTIADIKAYRPKENSISSSQVLGCD-YDFEGGRLIAKEMADLLCLK 155 Query: 278 LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 L + IS ++ S + +G ++ + T ++ I+ + I Sbjct: 156 LVEKGLVTDPISLYVGYSRRLQKKSAHG---TITMPVTTSSAKKIMGYTQELFEQIVDRN 212 Query: 338 HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 + + + Q +LF D A ++ M + K G+ + + Sbjct: 213 APIHRVTLAFNRVVDEMYQQYDLFTDPAEIEREHKIQKTMLEIKEKFGKNAILKGMNLEK 272 Query: 398 QQWQMKRAM 406 +R Sbjct: 273 GATTKERNR 281 >UniRef50_B5H9Q9 Putative uncharacterized protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H9Q9_STRPR Length = 330 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 60/324 (18%), Positives = 111/324 (34%), Gaps = 21/324 (6%) Query: 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDFGREIRATVLQRTH 132 +Y +++ E++SP V+ D A D+ G RD +R L Sbjct: 20 PMYEAALPALLAVAEDISPVVQALPPDAALVDVRGAERYFGRDAAQLASLLRVRALAHCG 79 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 + +G +A++A A G + E + PV + G+G + Sbjct: 80 VDCVIGAGPVPMIARMAAREAVP------GTTLVVTEEETAAFLDGRPVAALDGVGPVTA 133 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPTKQEIICSR 251 + L A G+ + +A + I++ R RG + A ++ + R Sbjct: 134 RTLCAYGLDSAGRVAGAPLAVIQRILGARAGREVWERARGIDRTAVVPNALSR-SMAAER 192 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 SFG D R+A+ S A ++R E Q CR ++ ++ + + Sbjct: 193 SFGLDELDQIEHRRALLSLAEELGSRMRGERQVCRSLTLTVRYADRSTTTRTRTLREPT- 251 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG--VAQLNLFDDNAPRPG 369 S + + A + + R + + D + QL FD Sbjct: 252 -----AHSAALADTAYALHEVLGLQRARVRGLSLRAEDLTAAERAARQLT-FDP--ADER 303 Query: 370 SEQLMTVMDTLNAKEGRGTLYFAG 393 + ++ V D AK G G + Sbjct: 304 ARRIEEVADRARAKFGPGAVVPGS 327 >UniRef50_Q2TTW3 UmuC n=8 Tax=Enterobacteriaceae RepID=Q2TTW3_ECOLX Length = 202 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 128/196 (65%), Positives = 151/196 (77%) Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 + L N+ R KL+S PV+++WG+GRRISKKL+ MGI T L LA FIRK+FNVVLE Sbjct: 4 LTLGNIRRTEKLLSLQPVEEIWGVGRRISKKLNTMGITTALQLARATPVFIRKNFNVVLE 63 Query: 224 RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 RTVREL GE C+ LEE P KQ+I+CSRSFGER+T Y +MRQA+C YA RAAEKLR E Q Sbjct: 64 RTVRELTGESCISLEEAPPPKQQIVCSRSFGERVTTYEAMRQAVCQYAERAAEKLRGERQ 123 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 +CR I+ F+KTSPFA+NEPYYGN AS KLL PTQD++DII AA R+LD IW GHRY KA Sbjct: 124 FCRHIAVFVKTSPFAVNEPYYGNMASEKLLIPTQDTQDIIAAAVRALDRIWVDGHRYAKA 183 Query: 344 GVMLGDFFSQGVAQLN 359 G ML DF GV+ LN Sbjct: 184 GCMLNDFAPDGVSLLN 199 >UniRef50_D0NYK2 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NYK2_PHYIN Length = 525 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 73/384 (19%), Positives = 122/384 (31%), Gaps = 87/384 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E G+PV V G ++A N +A+ GV+ GD K Sbjct: 9 VIIHLDLDCFYAQVEQRRLHIPDGQPVAV--QQWGSLLAVNYDARKFGVERGDFIDDAKK 66 Query: 61 LFRRCGVVCF------------------SSNYELYADMSNRVMSTLEELSPRVEIYSIDE 102 + + + Y S + + L + P +E SIDE Sbjct: 67 KCPQIHLPHVDTLGKNCKPGQLFDRTHQKAILRRYRIASRDIFAILGSMVPIIEKASIDE 126 Query: 103 AFCDLTGVRN---------CRDLTD------------FGREIRATVLQRTHLTVGVGIAQ 141 AF D+T + C+D + REIR + + T GIA Sbjct: 127 AFMDVTDMAKERIAQTVYFCQDPANHDTKRLLCIGAVISREIRQAIYNKLGYTCSTGIAG 186 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG-- 199 K LAKLA+ K + + LM +LP+ + G+G ++ K+L+ G Sbjct: 187 NKLLAKLASPLNKPNGQ------VVVASRFVIDLMKSLPMRKIRGLGGKLGKQLETAGES 240 Query: 200 -----IKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 T L + + KH +G + E + +I Sbjct: 241 FKKLSAHTF--LQRCGLIELAKHVGQETAAYVHSICQGSDDNEPVEEKKVQVKITG---- 294 Query: 254 GERITDYPSMRQAICSYAARAAEKLR----SEHQYCRFIST-FIKTSPFALNEPYYGNSA 308 + + ++ +S FI+ P Sbjct: 295 -------------VRLLCEEVVIRCEDERIENKRFPSQLSIQFIRAKPGEKP-------R 334 Query: 309 SVKLLTPTQDS-RDIINAATRSLD 331 S KL + ++ AA + Sbjct: 335 SYKLGIGQDTTVDELYTAAMNVMR 358 >UniRef50_Q9UBT6 DNA polymerase kappa n=23 Tax=Tetrapoda RepID=POLK_HUMAN Length = 870 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 51/247 (20%), Positives = 89/247 (36%), Gaps = 18/247 (7%) Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + +EIR + Q+T LT GIA LAK+ + K + L N + Sbjct: 289 SAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQ----ILPNRQAVMD 344 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEP 233 + LP+ V GIG+ K L A+GI T +L + F+ + G Sbjct: 345 FIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQ-RALLSLLFSETSWHYFLHISLGLG 403 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 L ++ + R+F E I + A+ L+ E R ++ +K Sbjct: 404 STHL-TRDGERKSMSVERTFSE-INKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLK 461 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL----DAIWQAGHRYQKAGVMLGD 349 F + + + + + + +I A L DA + R + GV + Sbjct: 462 NVNFEVK------TRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISS 515 Query: 350 FFSQGVA 356 F ++ Sbjct: 516 FPNEEDR 522 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P+L KP+ V S + N A+ GV+ P F K L Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSM--SMLSTSNYHARRFGVRAAMPGFIAKRL 160 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + ++ N++ Y +S V L + P S+DEA+ ++T ++ + ++ Sbjct: 161 CPQ--LIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNIT--KHLEERQNWPE 216 Query: 122 EIRA 125 + R Sbjct: 217 DKRR 220 >UniRef50_C1SJI9 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJI9_9BACT Length = 250 Score = 188 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 80/247 (32%), Gaps = 14/247 (5%) Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 + + K M + + +WGIGR++ + MGI DL + + F + R Sbjct: 6 TTTDEAVKFMDSFELGKIWGIGRKLDARFRNMGIFNTADLRQLGEERLCEMFGLNGSRIY 65 Query: 227 RELRGEPCLQLEEF--APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 G + E + I S + I I + + + R Sbjct: 66 EMACGRYPDGVNEQKKEEPVKSIGHSMTIPHDIRSREEAASYILQLSEMVSARARKNGYS 125 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 + + I+ S T + I A D +W + + G Sbjct: 126 GKTLHLTIRDSE------MGTVGKRRTFGFFTSATHHIYEIAMSLFDELWDD-YPIRLLG 178 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 + LG V N+ DD P + +D +N K G+ + +A ++ K Sbjct: 179 ISLGSLVPGCVMLSNIMDDFQGWPD---IYDAIDKINDKYGKQVISYASVLKCKRRGAK- 234 Query: 405 AMLSPRY 411 +SP + Sbjct: 235 -TISPAW 240 >UniRef50_C9SBX6 DNA polymerase IV n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SBX6_VERA1 Length = 631 Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats. Identities = 70/397 (17%), Positives = 133/397 (33%), Gaps = 72/397 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CE V +P+ V +IA N A++ G+ + + Sbjct: 43 VIAHIDLDAFYAQCEMVRLDTPEDQPLAV--QQWQGLIAINYPARSFGIGRHCTLAEARK 100 Query: 61 LFRR-----------------------CGVVCFSSNYELYADMSNRVMSTLEELSP---- 93 L + + + Y S ++++ ++E P Sbjct: 101 LCPDLIAQHVATWREGDDKWAYRDDAAANITSDKVSLDPYRLQSRKILALIKETLPSDLQ 160 Query: 94 RVEIYSIDEAFC-----------------DLTGVRNCRDL----------TDFGREIRAT 126 +VE SIDE FC DL +D ++ R +RA Sbjct: 161 KVEKASIDEVFCYLGPPVVALDWQADALIDLDEDAENQDPDWDDVAILIGSEIIRGVRAR 220 Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 + + H T GIA K L+KL + K Q+ + ++ +S + Sbjct: 221 IHEVLHYTCSAGIANNKMLSKLGSAHKKPNQQ------TVIRNRAVQQFLSDFKFTKIRN 274 Query: 187 IGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTK 244 +G ++ + + TV DL T + ++ +RG ++ Sbjct: 275 LGGKLGDTIVNTFNTDTVKDLLPTPLDQMKARLGDETGIWVYNTIRGIDQSEV-NSRTQI 333 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 + ++ ++SF I + + + A +L E + + L+ + Sbjct: 334 KSMLSAKSFRPSIHTPDQGNRWLRIFVADIFSRLVEEGV----LENKRRPKTINLHHRHG 389 Query: 305 GNSASVKLLTPTQ---DSRDIINAATRSLDAIWQAGH 338 G S + P D + + + A L I G Sbjct: 390 GQMKSRQGPIPQGKPIDEQGLFDLARNLLQQIVAEGK 426 >UniRef50_D1WSU8 DNA-directed DNA polymerase n=3 Tax=Streptomyces RepID=D1WSU8_9ACTO Length = 335 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 57/346 (16%), Positives = 106/346 (30%), Gaps = 20/346 (5%) Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + + + R + E Y ++ L +L+P V+ D A D+TG D Sbjct: 7 RARSVLRVQLHGLGPAGQERYEQA----LALLRDLTPLVQALPPDAADLDVTGALRFFDR 62 Query: 117 T--DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + L +G + LA +A A+ Q V + Sbjct: 63 DTGGLAAMAALRLAAHLGLRATIGAGPNRMLAAMAADASAPGQVT----VVAPDPGAVAA 118 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEP 233 + P+ + G+G ++ L G+ V DL D + +++ + RG Sbjct: 119 FLRPKPLGALHGVGPATARTLGEYGLHRVGDLLDVPLLTLQRILGRATALTLSQRARGLD 178 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + A + S FG D + R+A+ R +LR+ Q ++ I Sbjct: 179 PRPVTSDAAPR-STGFSHEFGHDELDPAAHRRALLDLCERLGLRLRTTGQVAVRLALNIS 237 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 + A S L T + + AA R + V ++ Sbjct: 238 YADGA------TTQRSRTLEEYTAHTPALSAAAYDLYSRFGLQRARVRTITVRAELTDAR 291 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 Q L D ++ D + G + ++ Sbjct: 292 YAVQQLLLDP--ADGKRRRIEQAADRARTRFGDQAIRPGTLARPRR 335 >UniRef50_A0DAQ7 Chromosome undetermined scaffold_43, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0DAQ7_PARTE Length = 521 Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats. Identities = 65/444 (14%), Positives = 133/444 (29%), Gaps = 82/444 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++A+YA E +P V + +IA N A+ G+K G + Sbjct: 7 VYIHIDMDAYYAQAEQKLLNIPEDQP--VCARQWNSLIAINYPARDAGIKRGMLSEEAIK 64 Query: 61 LFRRCGVVCF---------------------------SSNYELYADMSNRVMSTLEELSP 93 L + + Y S + +T++ Sbjct: 65 LCPNVMLPHVETFKVIDGKMVFSTLKDKYIQHNQYEEKVSLRYYRQESKLIFTTIKRFCN 124 Query: 94 RVEIYSIDEAFCDLTGVR----------------------------NCRDLTDFGREIRA 125 VE DE + ++ R + + IR Sbjct: 125 CVEKGGTDEGYIQVSEKELEDIEAQQFYGHLMKELPEDYQLTEQDHLLRRASLLCQNIRD 184 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + T GI+ K LAKLA+ K ++ L + +S + ++ + Sbjct: 185 AIYTETKYKCSAGISFNKMLAKLASATNKPNKQTIILECML------PECISNIGINKIR 238 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL-EEFAPTK 244 G G ++ + L G+KTV I ++ F + +LRG + +E Sbjct: 239 GFGGKVQEALLESGLKTVGQAQTLSIYELQSLFGDKAQYIYDKLRGYDDEIVKKEVDLKN 298 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKL----RSEHQYCRFISTFIKTSPFALN 300 + I+ ++ ++ + + Q++ ++ + + I + Sbjct: 299 KSILSLKNI-KKTSSREVIIQSLELILHDITMRVTDYYEDSNLVPSVLV--IHY--HNVE 353 Query: 301 EPYYGNSASVKLLTPTQDSR-DIINAATRSLDAIWQAG-HRYQKAGVMLGDFFS-QGVAQ 357 + + S + L P + R I L+ I G+ F Q Sbjct: 354 KGSHQKSEPIYLTLPIESFRLTIEERVHSILNQIQDNEMFPLIHIGISCRYFKPMIQGIQ 413 Query: 358 --LNLFD----DNAPRPGSEQLMT 375 + +F + +L Sbjct: 414 NPITMFFKKILEQQEYEKQAKLAE 437 >UniRef50_B7QI10 DNA polymerase eta, putative n=2 Tax=Ixodes scapularis RepID=B7QI10_IXOSC Length = 727 Score = 182 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 78/445 (17%), Positives = 125/445 (28%), Gaps = 120/445 (26%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + +L D++ FY E P+ GKP V N G +IA N EA+ALGVK G + Sbjct: 9 VISLVDMDCFYVQVEQRLAPEWKGKPCAVAQYNTFQGGGLIAVNYEARALGVKRGMRGEQ 68 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT---- 108 L + + ++ Y D V+S L + V+ SIDEA+ DLT Sbjct: 69 ALKLAKDLHLFRVPEQRGKADLTRYRDAGAEVLSVLCQFGAVVQRASIDEAYLDLTPVVT 128 Query: 109 -----------------GVRNCRDLT---------------------------DFGREIR 124 G R + IR Sbjct: 129 AQATFPSPDSLPSTHVVGYPEERGVRSREEAVAEWLSTIVDPGGGDSLLARGCALVERIR 188 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR-------------------------Q 159 A VL++T G+A K LAKL K Q+ Sbjct: 189 AAVLEQTGFDCSAGVAHNKVLAKLVCGLHKPRQQTVLPHSAVPTLFATLPVLAKLVCGLH 248 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR-KHF 218 + L + LPV + +G ++ + V + ++ F Sbjct: 249 KPRQQTVLPHSAVPTLFATLPVHKLRNLGGKLGE--------DVREKLQVSQDYLCLSVF 300 Query: 219 N-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 + + RG + Q I C ++F + A Sbjct: 301 GHRTGQWLYKLARGVDDEPVTCRKLP-QSIGCGKNFTG----------------SSALHS 343 Query: 278 LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 + + ++ + S S S ++ + I A L + Sbjct: 344 ADKNDRTAQLLTVGVTRS-----GHQGAISRSCPMVAYC--ATRIAQDALAVLAKLNTTD 396 Query: 338 H---RYQKAGVMLGDFFS--QGVAQ 357 + F AQ Sbjct: 397 FWTPALTNISLSATRFRDGTDDAAQ 421 >UniRef50_B6VBS6 Putative uncharacterized protein n=1 Tax=Caenorhabditis sp. PS1010 RepID=B6VBS6_9PELO Length = 975 Score = 181 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 60/307 (19%), Positives = 102/307 (33%), Gaps = 75/307 (24%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALGVKMGDPWF 56 + L D++ FYA E +PDLWGKPV+V+ ++ G ++A + EA+ G+K G Sbjct: 674 IIGLIDMDCFYAQVEQRDQPDLWGKPVIVVQHSRQGVLGGILAVSYEARTFGIKRGMTVT 733 Query: 57 KQKDLFRRCGVVCFS-------SNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDL 107 + K V ++ + Y D S V L + VE S+DEAF DL Sbjct: 734 EAKAKCADLNVCHVPIGEYADKADIQKYRDASAEVFEVLNNIDSNIIVEKASVDEAFLDL 793 Query: 108 ---------------------------------------------------TGVRNCRDL 116 T + Sbjct: 794 SIYIEKILEVEQETELSDIIGALPTTHIADGNDKKETEEERIDRIAKFYEETKSDENQKK 853 Query: 117 TDFGREIRATVLQ----RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + +T GI K +AKL K Q+ + + Sbjct: 854 LMIAAIAIEDIRAKIREKTQFYCSAGIGNNKMMAKLVCARHKPRQQ------TIIPFQYV 907 Query: 173 RKLMSALPVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 R ++ P+ D+ G G ++ K ++ + IKT+ ++ + + + F E G Sbjct: 908 RDILKVTPIGDIRGFGGKMGTKIMEMLKIKTMGEILTIEFERVVEAFPEQHEYLKCVAEG 967 Query: 232 EPCLQLE 238 + Sbjct: 968 YDDEPVH 974 >UniRef50_Q5Q9H1 Polymerase kappa isoform 8 n=14 Tax=Eumetazoa RepID=Q5Q9H1_MOUSE Length = 547 Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats. Identities = 47/231 (20%), Positives = 79/231 (34%), Gaps = 16/231 (6%) Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + +EIR + Q+T LT GIA LAK+ + K + L + Sbjct: 288 SAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQ----ILPSRSAVMD 343 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEP 233 + LP+ V GIG+ K L A+GI T +L + F+ + G Sbjct: 344 FIKDLPIRKVSGIGKVTEKMLMALGIVTCTELYQQ-RALLSLLFSETSWHYFLHIALGLG 402 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 L ++ + R+F E I+ A A L+ E R ++ +K Sbjct: 403 STDL-ARDGERKSMSVERTFSE-ISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLK 460 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG--HRYQK 342 F + + + + + +I A L G H + Sbjct: 461 NVNFEVK------TRASTVPAAISTAEEIFAIAKELLRTEVNVGSPHPLRL 505 Score = 161 bits (409), Expect = 4e-38, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 6/124 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P+L KP+ V S + N A+ GV+ P F K L Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGSM--SMLATSNYHARRFGVRAAMPGFIAKRL 159 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + ++ N++ Y +S V L E P S+DEA ++T ++ ++ D+ Sbjct: 160 CPQ--LIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAXLNIT--QHLQERQDWPE 215 Query: 122 EIRA 125 + R Sbjct: 216 DKRR 219 >UniRef50_B6HVX2 Pc22g06410 protein n=8 Tax=Trichocomaceae RepID=B6HVX2_PENCW Length = 572 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 76/465 (16%), Positives = 132/465 (28%), Gaps = 116/465 (24%) Query: 4 LC-DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D + FYAS V +P+L P+ V V+ N EA+ G+ K + Sbjct: 32 HIQDYDCFYASVFEVEQPELRSLPLAV--QQKQIVVTCNYEARRRGLHKLQLIKDAKRIC 89 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLT-------GVRNC 113 V+ + + + S + + RVE DE F D+T GV+N Sbjct: 90 PDV-VIVLGEDLTKFRNASRELYQLVRSFVWGGRVEKLGFDELFLDVTEMIDYNTGVQNQ 148 Query: 114 RDLTD---------------------------------FGRE------------------ 122 DL + R+ Sbjct: 149 NDLENSYFHLDRNDPTVGFSYDATRFQGSTFPAMEAACIARKNSSSSEMRLLVASHLQGH 208 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ---TGGVVDLSNLERQRKLMSAL 179 IR+ + T GI+ +K LAKL + K + +N + + Sbjct: 209 IRSKLEHEIGFTATGGISTSKLLAKLVGNVHKPNGQTTLLPPYTATENNTSNVFQFLDDH 268 Query: 180 PVDDVWGIGRRISKKLDAMGIK---------TVLDLADTD---IRFIRKHFN------VV 221 + + GIG RI++KL + I TV D+ + + + Sbjct: 269 EIRKIPGIGSRIAQKLKSH-ITGQENVDEKITVKDVRQFPGMGPPLLDRILGGPGSVKGI 327 Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 R L G ++ E +I S+G R+ +R+ + + ++R++ Sbjct: 328 GMRIWSILHGVDNSEVLEGRDVPTQISIEDSYG-RLDTLEGVRRELVVLSRSLIRRVRTD 386 Query: 282 --------------HQYCRFISTFIKTSPFALNEPYY----GNSASVKLLTPT-QDSRDI 322 + R + + P S S L +I Sbjct: 387 LLDMSDESAPRGRWRAHPRTVRLSTRPRPPPDPGGRSYNSNRISRSAPLPPFVFNLDENI 446 Query: 323 INAATRS--------LDAIWQA--GHRYQKAGVMLGDFFSQGVAQ 357 A R + G V + + Q Sbjct: 447 DALAERLVRESLFSMFRKLHPEKTGWNLSLLNVAVTNMVESAGDQ 491 >UniRef50_B5HS70 Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HS70_9ACTO Length = 323 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 70/323 (21%), Positives = 111/323 (34%), Gaps = 21/323 (6%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGI 139 +V+ L LSP V+ A DL G D G +R + R + V VGI Sbjct: 17 RQVLEELAGLSPVVQALPPTAALVDLRGALPYYGVDARRLGEVLRIRTISRLGVDVRVGI 76 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 T T+A A+ + GGV+ ++ E + LPVD + GIG R + L G Sbjct: 77 GPTITVAATASGQI----PRPGGVLAIT-PEEVAGWLGPLPVDALHGIGPRQATVLRDYG 131 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERT-VRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 + V LA +++ R RG + P + F E Sbjct: 132 VHCVGLLAALPPATVQRLLGGKAGRLAADRARGIARPVVPRALPATASVRYR--FDEHTL 189 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 D +R A+ R +LR Q R ++ + + + +L P+ Sbjct: 190 DGAVVRAALLELVVRLGTRLRGRDQAARALTLSLTFA------GGGSWDKTRRLTAPSAH 243 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV--AQLNLFDDNAPRPGSEQLMTV 376 D+ A + +DA + D QL+L D R +E Sbjct: 244 EDDLRQLAYQLMDAAGLQRGLLTGLVLKAEDLLDADQAPRQLSLDDAREARLATE---GA 300 Query: 377 MDTLNAKEGRGTLYFAGQGIQQQ 399 +D + K G + A + Sbjct: 301 VDRIRDKFGTRVIGPAAVFRRAS 323 >UniRef50_D1C5S3 DNA-directed DNA polymerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5S3_SPHTD Length = 397 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 78/414 (18%), Positives = 139/414 (33%), Gaps = 31/414 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 A + F E + RP+L G+P+V+ V EA A G++ G + Sbjct: 5 IACVSIPHFALRVEVLERPELDGRPLVLATPPGGRNLVDDCTLEAIAAGIRPGLSLREVT 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTD 118 L V N A + R+++ LE LSP VE + + DL G+ R+ Sbjct: 65 ALCPDA--VVVQPNPVRDAAVFERIVTRLEGLSPLVEPAAPGCCYVDLRGLDRHYGSPER 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + V L GIA K A++A A G + E ++ Sbjct: 123 AAARLLQAVPPL--LRPRAGIAPGKFAARVAAGQAAP------GGWHIVAPEDVATFLAD 174 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+D + + + ++L+ +G++T+ DLA+ ++ F R +G + Sbjct: 175 KPIDWLP-LPPDMLRRLERLGLRTMRDLAELPAHAVQARFGPEGRRAWELAQGLDSDPVR 233 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + ++ S T ++ A+ RA + + R Sbjct: 234 PRERAE-SVVVELSLPAPATSRDALMIALRQLVTRAFARPALHGRGVRQARLRAH----- 287 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 E L P R I R + + L + Q Sbjct: 288 -LEGGRSWEHVATLREPAGRERLIDALGHRL--QAVTLPAPLEALTLELTGLTAVAAHQE 344 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW----QMKRAMLS 408 LF + QL+ + L + G +Y + + W + +RA++S Sbjct: 345 TLFG--TRPRRARQLIEAIRQLKQRYGTSPIYRVVEV--EPWSRIPERRRALIS 394 >UniRef50_B2I406 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I406_ACIBC Length = 261 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 2/208 (0%) Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 +K F+VVL RTV ELRG PC+++E P++++II S+SFG+R+T +++AI Y A Sbjct: 3 KKQFSVVLARTVMELRGIPCIEIEHSPPSQKQIISSKSFGQRVTALEDLQEAISRYTQDA 62 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 +LR + C I F ++PF YY S++ + PT + ++ AA + ++ ++ Sbjct: 63 FRRLRKANLLCGCIIVFAHSNPFDNKRKYYYKSSTSGFVVPTDNVLTLVEAAVKLIEKVY 122 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 G Y+K G++L + + +L D E LM +++ K G+ L Sbjct: 123 TEGIEYKKCGLILTGLEPKSLFTYDLLTDMDDIAKQENLMLAFESITNKFGKKKLAVGTC 182 Query: 395 GI-QQQWQMKRAMLSPRYTTRSSDLLRV 421 ++W M R LS Y +LL++ Sbjct: 183 MFPDRKWTMCRNSLSQNYF-SWDELLKL 209 >UniRef50_B2ABI5 Predicted CDS Pa_1_20790 n=4 Tax=Sordariomycetes RepID=B2ABI5_PODAN Length = 696 Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats. Identities = 64/430 (14%), Positives = 124/430 (28%), Gaps = 104/430 (24%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++ FYA E V KP+ V +IA N A+A + + + Sbjct: 45 VVAHLDLDCFYAQVEMVRLGIPEDKPLAVQQWERQGLIAVNYPARAFKIGRHCTVTEARR 104 Query: 61 LFRRCGVVCF-----------------------SSNYELYADMSNRVMSTLEELSP---- 93 L + + Y S R+M ++E P Sbjct: 105 LCPELIAQHVATWREGDDKWAYREDAAEHIATDKVSLDPYRLESRRIMRVIKEHLPGGGL 164 Query: 94 -RVEIYSIDE-----------------------------------------------AFC 105 +VE SIDE A Sbjct: 165 QKVEKASIDEVFLDLTAHVHQVMLERYGEELGGPPPYGDVSEELPMPVVTALDWKADALV 224 Query: 106 DLTGVRNCRD--------------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 DL ++ R +R + ++ + G+++ K L+KL + Sbjct: 225 DLGEGDRQEGEFDDPDWDDVALLVASEIVRNVRGVIREKLGYSCSAGVSRNKLLSKLGSA 284 Query: 152 AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADTD 210 K Q+ + +S + +G ++ +++ A + V DL Sbjct: 285 HKKPDQQ------TVIRNRAVGHFLSGFKFTKIRNLGGKLGEQVADAFKTEAVSDLLTVP 338 Query: 211 IRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICS 269 I +++ LRG ++ + ++ ++SF IT + + Sbjct: 339 IEQLKQKLGDENGVWIYETLRGIDTSEVNSG-TQIKSMLSAKSFRPDITTVEQATKWLRI 397 Query: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ--DSRDIINAAT 327 +AA +L E + + L+ + + S P + + + A Sbjct: 398 FAADIFARLVEEGV----LEHKRRPKTINLHHRHGNQTRSRSGPIPARLLNEESLFELAK 453 Query: 328 RSLDAIWQAG 337 I G Sbjct: 454 NLFHQITLEG 463 >UniRef50_A8JCD8 DNA polymerase eta/iota n=1 Tax=Chlamydomonas reinhardtii RepID=A8JCD8_CHLRE Length = 873 Score = 174 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 108/314 (34%), Gaps = 61/314 (19%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D++ FY E +PV V +IA N A+A GV + K L + Sbjct: 28 DLDCFYCQVEQKRLGIPREQPVAV--QQWDGLIAINYAARAAGVTRHMRVREAKKLCPQL 85 Query: 66 GVVCFSSNYELYAD------MSNRVMSTLEEL---------------------------S 92 +V + + S ++M+ L + Sbjct: 86 RLVHVETISAGDGESGSPVKASGQIMALLGSMLRPSAAATAATAAGGGAATATGPVSGGG 145 Query: 93 PRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLAN 150 +E S+DEAF D++ + C + +R V ++ T G++ K LAK+ + Sbjct: 146 CLLEKASVDEAFLDVSPLVACSPCGGGLIAQRLRRAVYEQLGFTCSAGVSVNKLLAKVGS 205 Query: 151 HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL---- 206 K ++ L + +++ LP+ + G+G ++ L+ L Sbjct: 206 ARNKPDKQ------TLVLPRGVQDMLTDLPLGKLRGLGGKLGAALE-------GQLGAAT 252 Query: 207 ----ADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 A + +++ + +RG+ C + + ++ +SF E + Sbjct: 253 AGQAAALPLEALQRVLGERSGLWVWQVVRGQ-CSEPVTPKDKPKSLLSCKSF-EPTSAPA 310 Query: 262 SMRQAICSYAARAA 275 +++ + A Sbjct: 311 ELQRWLLILAEELG 324 >UniRef50_A4S4R4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S4R4_OSTLU Length = 534 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 82/473 (17%), Positives = 147/473 (31%), Gaps = 115/473 (24%) Query: 1 MFALCDVNAFYASCETVF------------RPDLWGKPVVVLSNN---DGCV-------- 37 + A D++AFY E R P+VV+ N G V Sbjct: 11 VVAHLDLDAFYCQVERRDLRAKTAAGRRDGRASAEDVPLVVVQYNPFERGGVRALAPDDD 70 Query: 38 ------------IARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS-----SNYELYADM 80 IA + EA+A GVK + + L C VV ++ LY + Sbjct: 71 RELRDGFENHSLIAVSYEARARGVKRNMRGREARALAPACAVVQVPTRRSKADLTLYREA 130 Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLT-------------------------------- 108 V + L +E SIDEA+ DLT Sbjct: 131 GREVAAVLAR-GGTIERASIDEAYLDLTESAKKVLEETAWATILEKARTSHAAGASAVSG 189 Query: 109 --------------GVRNCRDLTD----FGREIRATVLQRTHLTVGVGIAQTKTLAKLAN 150 R L +R + T+ GIA K LAKL + Sbjct: 190 KGYASVAWWNRDESEWREEEKLLAAGAYICFNLRKACVDELGYTLSAGIALNKMLAKLTS 249 Query: 151 HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADT 209 K + + + L+ LP+D + G+G + ++L + +KT+ +LA T Sbjct: 250 GMNKPASQ------TVLCPDHTSTLLDELPIDRIRGLGAKFGRELADGLNVKTIGELART 303 Query: 210 DIRFIRKHFNVVLERTVRE-LRGEPCLQLEEFAPTKQEIICSRSF--GERITDYPSMRQA 266 +R + + + VR+ G ++ + I ++F I S + Sbjct: 304 PLRKLEEVCGEEKAQWVRKVSLGLDDDPVKA-REMPKSIGTGKTFRGALAIRSIASAKHW 362 Query: 267 ICSYAARAAEKLRSE----HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + A ++ ++ ++ + ++ + +SP S L + ++ Sbjct: 363 LAELTAELNDRCEADEEEWNRVPKLLTLGL-SSPDERETSSGHCSRRCPLRPG---ADEM 418 Query: 323 INAATRSLDA--IWQAGHRYQKAGVMLGDFFSQGVAQLN---LFDDNAPRPGS 370 A L + V +F S + +F + + Sbjct: 419 AQDALTLLSKWASGRERWSITGMSVSASNFVSLEKDSGDVVEMFKNATKAAKA 471 >UniRef50_B9NI90 Predicted protein n=36 Tax=cellular organisms RepID=B9NI90_POPTR Length = 628 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 50/238 (21%), Positives = 81/238 (34%), Gaps = 26/238 (10%) Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 LAK+ + K + + + L V GIG + ++KL A+GI+T Sbjct: 1 MLLAKIGSELDKPDG------LTILTPADIPTRIWPLAARKVNGIGPKAAEKLAAIGIET 54 Query: 203 VLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT--- 258 V LA+ DI ++ HF G Q+ + + + +F + Sbjct: 55 VGQLAEADIALLQAHFGRNYASWLAEVANGRDERQVV-VSSEPKSMSRETTFERDLHPRG 113 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 D P + + R AE LR + R + ++ F + + + L T D Sbjct: 114 DRPVLSEQFTRLCMRVAEDLRRKGYVGRTVGIKLRFDDF------HTVTRDLTLTAHTAD 167 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ-------GVAQLNL-FDDNAPRP 368 I + AT L I R + GV + Q L FD P Sbjct: 168 GATIRHGATECLKRI-PLERRIRLLGVRVSALIPAADQGDDPAPVQEELRFDAEPDSP 224 >UniRef50_UPI0001926C03 PREDICTED: similar to polymerase (DNA directed), eta, partial n=2 Tax=Hydra magnipapillata RepID=UPI0001926C03 Length = 501 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 60/400 (15%), Positives = 112/400 (28%), Gaps = 107/400 (26%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY P+L GKP V+ N G +IA EA+ GV + Sbjct: 9 VVLLVDMDCFYVQVVQRKNPELVGKPCAVVQYNAWKGGGIIAVGYEARKFGVTRQMRGDE 68 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K+ +V ++ + + V+ L + +E S+DEA+ DLT + N Sbjct: 69 AKEKCPDIHLVPVPENRGKADLTQFREAGAEVIEILAGFADCLERASVDEAYMDLTELIN 128 Query: 113 ----CRDLTDFG------------------------------------------REIRAT 126 D+ + ++ Sbjct: 129 RDFCNYDIEEVALHTFQNTNIVGIDNMVTGLTNTQDILKCDLYKQWHEVLHRSEENLKLA 188 Query: 127 V------------LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + ++ T GI Q K LAK+ K Q+ L + + Sbjct: 189 IGATIADKMRKEVKEKLGFTCSAGIGQNKMLAKIVAGFHKPDQQ------TLVLPDNVAE 242 Query: 175 LMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKH-FNVVLER------TV 226 + + + + +G ++ K+L ++ + DL + KH + Sbjct: 243 MFQSTKMRKIRSLGGKLGKQLAETFNVEYMSDLLKISSNDLEKHSVGKPAYNTCSNTILL 302 Query: 227 RELRG----------------EPCLQLEE-FAPTKQEIICSRSFGERITDYPSM-RQAIC 268 +E G P + + I F D + I Sbjct: 303 KECMGAINEDMFIRQALKRFSIPRSTIHNKIKSKHKCISAPTIF---TYDEEQLFSSRIK 359 Query: 269 SYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 + H I + +P + Sbjct: 360 VMCDK------EFHLATFRIMMKLCDNPGNKKVVMKRGTK 393 >UniRef50_Q99QR3 Putative uncharacterized protein SCP1.321 n=4 Tax=Streptomyces RepID=Q99QR3_STRCO Length = 341 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 67/325 (20%), Positives = 113/325 (34%), Gaps = 24/325 (7%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DFGREIRATVLQRTHLTVGVGI 139 +V+ L +LSP V+ A +L G G +R L R + V VGI Sbjct: 34 RQVLELLTDLSPVVQALPPTAALVELKGALRYHGSEVHRLGEVLRVRTLSRLGVDVRVGI 93 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 + T+A A+ GGV+ ++ + ++ LP + + G+G R + L G Sbjct: 94 GPSITIAATASAQV----PLPGGVLTVA-PDDVTDWLAPLPGEALHGLGPRQAGALHEYG 148 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERT-VRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 I TV LA +++ R RG + A + R F + Sbjct: 149 IHTVGLLAAVSPETVQRLLGGKAGRLAADRARGRDPRPVVPRALPAAATVRMR-FDRHVL 207 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 D +R A+ + LR Q R +S ++ + S +L P+ Sbjct: 208 DGADVRAALLDLVVQLGRLLRRRGQAARAVSLTLQFA------GGGSWEKSRRLPEPSAH 261 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG--VAQLNLFDDNAPRPGSEQL--M 374 D+ A R +DA R + D Q++L + +L Sbjct: 262 DEDLRTMAYRLIDAAGLQRGRLTGLFLKADDLVDADRVAQQISL-----DQAREARLVAE 316 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQQ 399 +D + K G G + A + Sbjct: 317 ATVDRVRDKFGPGVIGPAATARRAS 341 >UniRef50_B0W8N7 DNA polymerase eta n=1 Tax=Culex quinquefasciatus RepID=B0W8N7_CULQU Length = 820 Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats. Identities = 74/448 (16%), Positives = 147/448 (32%), Gaps = 108/448 (24%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY E P++ G+P+ V+ N G +IA N A+A GV + Sbjct: 16 VVVLVDMDCFYCQVEEKLNPEIKGQPIAVVQYNPWQGGGIIAVNYPARARGVTRHMRGDE 75 Query: 58 QKDLFRRCGVVCFSSNY--------------------------------ELYADMSNRVM 85 + + E Y D++ RV+ Sbjct: 76 ARQHCPEIVLPQVPQRGGKADISKYRDAGKEVAAVLQTFTPLLERASVDEAYMDITERVL 135 Query: 86 STL-----------------------EELSPRVEIYSIDEAFCD--------------LT 108 + L E + V+ S D D + Sbjct: 136 ARLHDMNVGKFHLQPETLDNTFAVGYESVGQYVQKISCD---LDGRSSSQELESEEDRVA 192 Query: 109 GVRNCRDL---TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 ++ L EIRA V ++T GIA K LAKL K ++ Sbjct: 193 YKKSDIKLLIGASIVNEIRAAVKEKTGYECSAGIAHNKILAKLTAGFNKPNKQ------T 246 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHFNV-VLE 223 + L+ KL L + V G+G ++ ++ + + I+ + L + ++ HF+ + Sbjct: 247 VLPLKSISKLYQTLQIKKVKGLGGKLGEQVCELLKIEFMSQLTQFSEKQLQAHFDERMGS 306 Query: 224 RTVRELRGEPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEKLRSE 281 RG + + I C + F + IT +++ + A ++L + Sbjct: 307 WMYLMARGIDLEAVTP-KFNSKSIGCCKRFPGKNAITGLATLQHWLGELANEIQDRLEKD 365 Query: 282 ----HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-- 335 ++ R ++ + + + ++ SV L+ ++ I A ++ + Sbjct: 366 LDENNRTARQMTVS--YAQ-QIGDNDVSSTRSVPLVCY--EAERIAKDALEAIRRNTEVF 420 Query: 336 --------AGHRYQKAGVMLGDFFSQGV 355 + + G+ G F + Sbjct: 421 LKQGSNGALNNAVKFLGISAGKFENNAT 448 >UniRef50_C7CFB9 Putative DNA-directed DNA polymerase n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CFB9_METED Length = 398 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 1/200 (0%) Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 R++R TV RT ++ VGI TKTLAKLANH AKK + GGV DL++ + Sbjct: 14 GPVTLCRDMRETVRARTGISTCVGIGATKTLAKLANHVAKK-VPELGGVCDLTDPIQYGH 72 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 M+ +P +D+WGIG ++KL+A+G ++V D+ D D R +RK VV ER V+ELRG C Sbjct: 73 WMARIPPEDIWGIGPANARKLEALGCESVADVRDLDTRAVRKAMTVVGERLVQELRGLAC 132 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 L LEE A ++ +RSF + + D +M QA+ ++AA+ EKLR ++ F T Sbjct: 133 LDLEEVASARKGCAVTRSFSDGVEDLATMEQAVATHAAQLGEKLRGGGLATDHVTVFFHT 192 Query: 295 SPFALNEPYYGNSASVKLLT 314 S + P S+ V L Sbjct: 193 SEHERDRPQRSVSSVVTLAR 212 >UniRef50_A4RZL9 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZL9_OSTLU Length = 429 Score = 172 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 58/274 (21%), Positives = 101/274 (36%), Gaps = 29/274 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AF+A+ E P L PV V G +I + A+ LG K + L Sbjct: 30 VAHVDADAFFAAVEKQRNPRLRDVPVAV--RQHGDIICVDHRARELGATKHMNPDKCRAL 87 Query: 62 FRRCGVVCFSSN--------YELYADMSNRVMSTLEELSPRV---------EIYSIDEAF 104 G + YE Y S + + L R+ + S+DEA+ Sbjct: 88 LTPHGGEVVHVHSTDDHMLSYEPYTRASYELHAKLYAACERLRVDGGTLIYQRASVDEAY 147 Query: 105 CDL-TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV 163 L G + + F IR + + +V VG+A+ K LAK+A+ AK GV Sbjct: 148 VQLENGAKPSQRGKAFAESIRRAIAEECGYSVSVGVARNKMLAKIASKLAKPN-----GV 202 Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHFNVVL 222 V + + + LP + + ++ L ++T D+ + + + + + Sbjct: 203 VVIEDEADLERCFRQLPSSHLPKCNEPLIRRNLALHNLRTAWDVRELNAKRLEALVGLTR 262 Query: 223 ER---TVRELRGEPCLQLEEFAPTKQEIICSRSF 253 ER + G ++ K + S + Sbjct: 263 ERALALCKAAHGVDDSEVVHKVHEKNTLSSSMTL 296 >UniRef50_B2VTY6 Sister chromatid cohesion protein Eso1 n=8 Tax=Leotiomyceta RepID=B2VTY6_PYRTR Length = 714 Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats. Identities = 70/427 (16%), Positives = 134/427 (31%), Gaps = 101/427 (23%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CETV KP+ V +IA N A+A G+ + Sbjct: 45 VIAHVDLDAFYAQCETVRLGIDPSKPLAV--QQWQGLIAINYPARAFGLSRHVTSTEALK 102 Query: 61 LFRRCGVVCF-----------------------SSNYELYADMSNRVMSTLEELSP---- 93 + + + Y S +++ ++E+ P Sbjct: 103 QCPELILQHVATWKEGDETWAYHENSFKDMATHKVSLDPYRQESRKILKCIKEILPDKDQ 162 Query: 94 RVEIYSIDEAFCDL---------------------------------------------T 108 RVE SIDE F DL T Sbjct: 163 RVEKASIDEVFMDLSAQVHTILLERYPELRGPAPYDDPTERLPKVPTTVLDWAADALVET 222 Query: 109 GVRNCRD------------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 G + D ++ R++R + T GIA+ K L+KL + K Sbjct: 223 GEEDGEDRDPDWDDVCMVIASEIVRDVRKHIKDTLGYTCSGGIARNKMLSKLGSGYKKPN 282 Query: 157 QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM-GIKTVLDLADTDIRFIR 215 Q+ + + +S + + +G ++ ++ AM G V DL + + ++ Sbjct: 283 QQ------TVIRNRAVKHFLSDMKFTKIRMLGGKLGDEVVAMFGTDKVRDLVEQPLDQLK 336 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + + +RGE ++ + ++ ++SF I + + + + A Sbjct: 337 RLGDDTGTWIHSIIRGEDNSEVNP-RTQIKSMLSAKSFRPAIHSFEQGVRWLRIFVADIF 395 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ---DSRDIINAATRSLDA 332 + E + + L+ + S + P + + A L Sbjct: 396 SRCVEEGV----LENKRRPKSINLHHRQGAQTRSRQAPIPQGKPLSETILFDLAKNLLAQ 451 Query: 333 IWQAGHR 339 + G Sbjct: 452 VVVDGRA 458 >UniRef50_Q7PXH4 AGAP001404-PA n=4 Tax=Coelomata RepID=Q7PXH4_ANOGA Length = 881 Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 152/443 (34%), Gaps = 99/443 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY E P + GKP+ V+ N G +IA N A+A GV + Sbjct: 16 VVVLVDMDCFYCQVEEKLNPAIRGKPIAVVQYNPWQGGGIIAVNYPARAEGVTRHMRGDE 75 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG--V 110 K + ++ Y + V L+ +P +E SIDEA+ D+T + Sbjct: 76 AKQHCPEIELPQVPQVRGKADLTRYREAGKEVADVLKSFTPLLERASIDEAYLDITERVL 135 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVG---IAQTKTLAKLANHA--------------- 152 ++ + ++R ++ T VG I + T KL+N Sbjct: 136 TRIHEMNEGKFQLR---PEKLANTFAVGYENIGEFIT--KLSNTFDPAGGTAESNSQERL 190 Query: 153 -AKKWQRQTGGVVDLSNLERQR----------------KLMSAL-------------PVD 182 KK + + N R K+++ L P++ Sbjct: 191 EYKKSDIKLLVGASIVNEIRAAVKERTGFECSAGIAHNKILAKLTAGFHKPNKQTILPIN 250 Query: 183 DVW------------GIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRE 228 + G+G ++ + + + IK + +L +++HF + Sbjct: 251 SIPKLYETLPLKKVKGLGGKLGDQVCEVLKIKFMSELVQFPESVLQQHFEQRMGSWMYLM 310 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEKLRSE----H 282 RG L+ + I C + F + IT ++ + A+ E+L + + Sbjct: 311 ARGID-LEAVTAKFHSKSIGCCKRFPGKNAITGLATLHHWLNELASEVTERLEKDLDENN 369 Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA------ 336 + + ++ S ++ ++ S+ L+ D+ I A ++ + Sbjct: 370 RTAKQLTVS--YSQ-QIDNVDVSSTRSIALVAY--DAERIAADALDAIKRNTERFFASNS 424 Query: 337 ----GHRYQKAGVMLGDFFSQGV 355 + + G+ G F G Sbjct: 425 TTALHNPIKFLGISAGKFEPNGA 447 >UniRef50_D2LKT9 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=2 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKT9_RHOVA Length = 180 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 76/153 (49%), Positives = 98/153 (64%), Gaps = 1/153 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N+FY SCE VF P L +PVVVLSNNDGC+IA E+KALG KMGDP+ ++ Sbjct: 3 VFALADCNSFYCSCERVFEPKLETRPVVVLSNNDGCIIALTTESKALGFKMGDPYHLKRA 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 +R V +SSNY LY DMS RVM+ L +P +E+YSIDEAF +L G R LT + Sbjct: 63 DLQRRKVAVYSSNYTLYGDMSRRVMTVLTRFTPELEVYSIDEAFLNLAGFEG-RGLTGYA 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAA 153 R IR+TV Q T + V +G+ + L + Sbjct: 122 RTIRSTVRQETGIPVSIGVNRDPELPRFDTKNC 154 >UniRef50_C4Q445 DNA polymerase eta, putative n=3 Tax=Schistosoma RepID=C4Q445_SCHMA Length = 400 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 58/344 (16%), Positives = 113/344 (32%), Gaps = 79/344 (22%) Query: 38 IARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELS 92 +A + EA+ALG+K G + + + + Y D S+ V+ + E + Sbjct: 5 LAVSYEARALGIKRGMFSDEIRVQHPEVIIFKVPEKRGKAELTRYRDASSEVIQCISEFT 64 Query: 93 PRVEIYSIDEAF----------------------------------CDLTGV-------- 110 +E SIDEA+ +LT Sbjct: 65 SDIERASIDEAYVDLTVLIQDHNLSSLHPNPESYVLVNSDIAEESKLELTETNCVSLSGV 124 Query: 111 -------------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ 157 R ++ IR V +T GI K++AKLA K + Sbjct: 125 DWIKLLDSNFAEGRRLAVASELVYRIRQAVFTKTGFKCSAGIGPNKSIAKLACSLNKPNK 184 Query: 158 RQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRK 216 + + E L+ ++ + +G ++ + + I+T+ L+ + + K Sbjct: 185 Q------TIIPQESIPILLENTHINKIRNLGGKLGSTVVKKLKIETLGQLSSIPLSVLTK 238 Query: 217 HFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAAR 273 F + G ++ + + CS++F R +T +++ + A Sbjct: 239 EFGEKTSKWLHDLSHGID-HEVVTTRSLPKSVGCSKNFLGRATLTSSEQIKRWLLCLAEE 297 Query: 274 AAEKL----RSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 E+L +Y + + +T N+P Y S L Sbjct: 298 IFERLDVDYHQHQRYPTRLILYART----TNDPGYIGGISRTLP 337 >UniRef50_A2QJ22 Contig An04c0170, complete genome n=2 Tax=Aspergillus RepID=A2QJ22_ASPNC Length = 615 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 70/455 (15%), Positives = 126/455 (27%), Gaps = 108/455 (23%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D + FYAS V +P L P+ V V+ N EA+ G++ + K + Sbjct: 62 DYDCFYASVFEVEQPVLKSLPLAV--QQKQIVVTCNYEARRRGLRKLQLIKEAKQICPDV 119 Query: 66 GVVCFSSNYELYADMSNRVMSTLEELS----------PRVEIYSIDEA------------ 103 V+ + + D S + + V I SID A Sbjct: 120 -VIVLGEDLSRFRDASKDLFHYIRSFVWGEKVERLGFDEVCIASIDSATDLGSLSEMPVE 178 Query: 104 -----FCDLTG-------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 F T + +R + Q+ T VGI+ +K LAKLA Sbjct: 179 MVLHGFLGCTDEDTSAWLYTRLLVASHLAGYLRGQLEQQKGYTATVGISTSKLLAKLAGS 238 Query: 152 AAKKWQRQTG----GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM----GIK-- 201 K + T L+ + A + + GIG ++++KL G Sbjct: 239 THKPNNQTTLLPPYTTPTLAAPSNVLDFLDAHEIRKIPGIGSKLTRKLSHYLADGGAHSA 298 Query: 202 --------------TVLDLADTD---IRFIRKHFNVVLE------RTVRELRGEPCLQLE 238 TV D+ + + R L G ++ Sbjct: 299 PAVTTDDTADSNKVTVRDIRLLPGMGPSLLSRILGGPGAPRDIGVRVWGLLHGVDNTEVV 358 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR-------------SEHQYC 285 + +I S+G R+ S+R+ + ++R + +Q Sbjct: 359 QAGDLPTQISIEDSYG-RLDSLDSVRKELVLLTGSLLRRMRTDLTEKDRETDSIAANQSA 417 Query: 286 ----------RFISTFIKTSPFALNEPYYG---NSASVKLLTPT----QDSRDIIN---- 324 R + + + Y S S L + + Sbjct: 418 MSKVRWLAHPRTLRLSTRPRSATDSAQSYHGGRISRSAPLPGYVFHLDESVDALAERLVQ 477 Query: 325 -AATRSLDAIW--QAGHRYQKAGVMLGDFFSQGVA 356 + ++G + V + + Sbjct: 478 DQLLSMFRKLHPERSGWNLRLMNVAVTNLVDAAGE 512 >UniRef50_D1X5H2 DNA-directed DNA polymerase n=1 Tax=Streptomyces sp. ACT-1 RepID=D1X5H2_9ACTO Length = 337 Score = 167 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 58/331 (17%), Positives = 110/331 (33%), Gaps = 24/331 (7%) Query: 75 ELYADMSNRVMSTLEELSPRVEIYSID-EAFCDLTGVRNC--RDLTDFGREIRATVLQRT 131 ELY ++++ L+ +S RVE D A+ DLTG RD +R +L Sbjct: 25 ELYG----QLLAVLDSISSRVEPLPADWSAYVDLTGALTYWGRDAEGLVAVLRLRLLALH 80 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 + G T+++A +A G + + P + GIG R Sbjct: 81 GVQCSAGAGPTRSIAAMAADVTPPGAATVVG----HDPYEVSAFLRTRPASALPGIGPRT 136 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT-VRELRGEPCLQLEEFAPTKQEIICS 250 ++ L GI +V D+ADT + +++ R + A + + S Sbjct: 137 ARTLARYGITSVGDIADTQLPTLQRILGASAARLAHDRAHNIDERPVVPGAAPR-TVSAS 195 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 F D +A+ +LR+ + R ++ + + + + Sbjct: 196 HRFDRDELDTERHHRAVLGLVQDLGSRLRTGREIARALTLTVTYAD------RSQTARTR 249 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG--VAQLNLFDDNAPRP 368 L PT + + A L + R + + V QL + Sbjct: 250 ALAEPTAHTPALAATARALLTGLGLQRARVRALALRAERLRPAEDTVHQLT---LDDRDD 306 Query: 369 GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 ++ +D + G G A ++ + Sbjct: 307 RLRRIEAALDQAATRYGTGVAGAASTFLRAR 337 >UniRef50_Q4SL60 Chromosome 17 SCAF14563, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SL60_TETNG Length = 671 Score = 167 bits (425), Expect = 6e-40, Method: Composition-based stats. Identities = 72/416 (17%), Positives = 129/416 (31%), Gaps = 85/416 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E P L P VV G +IA + EA+A GV Sbjct: 8 VVALVDMDCFYVQVEQRINPALKNTPCVVAQYKTWKGGGIIAVSYEARAHGVTRNMWVDD 67 Query: 58 QKDLFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-- 110 K L V ++ LY + S V+ + + +E SIDEA+ DLT Sbjct: 68 AKKLCPDLQVARVRESHGKADLTLYREASVEVIEVMSRFA-VIERASIDEAYMDLTAAVQ 126 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + +DL ++ +I+A +L+ T++ G A + + Sbjct: 127 QRLKDLNNW--QIQAHLLKATYVQ---GFPPNPPERPAATEDVAHDREEQ-------RAR 174 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLD-----------------------AMGIKTVLDLA 207 ++ ++ LP + G + S +L + GI LA Sbjct: 175 GLQQWLAMLP---LPAAGEQSSAELQLAVGALIVEEMRAAVEKDTGFRCSAGISHNKVLA 231 Query: 208 DT------DIRFIRKHFNVVLE-----------RTVRELRGEPCLQLEEFAPTKQEIICS 250 R V E RG ++ + I CS Sbjct: 232 KLACGLNKPNRQTLLPLGSVGELFSSLPIGKIQWLYDLCRGVDFEAVKPRQLP-KSIGCS 290 Query: 251 RSFGERIT--DYPSMRQAICSYAARAAEKLRSE----HQYCRFISTFIKTSPFALNEPYY 304 ++F + + ++ + A E+L + + + ++ ++ ++ Sbjct: 291 KNFPGKTSLATKEQVQYWLNQLALELEERLTKDREANGRVAKMLTVGVRQ---LGDKRPS 347 Query: 305 GNSASVKLLTP------TQDSRDIINAATRS-LDAIWQAGHRYQKAGVMLGDFFSQ 353 S L+ T I + T A W + F Sbjct: 348 SFSRCCALVRYEATKLATDSFAIIRSLNTAGPHQATWTP--PLTMLHLSATKFSDA 401 >UniRef50_A4TZ00 UmuC protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZ00_9PROT Length = 200 Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 1/189 (0%) Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 +L A KQ CSRSF E +T Y + A+ ++A+RAAEK+R++ + F +T Sbjct: 11 RRLTPTAVAKQTTCCSRSFAEAVTLYDHVHDAVLTFASRAAEKIRADGLVAGALQVFAQT 70 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 F ++P + +A V+L T + +I AA L + W+ G+ Y+KAGV+L D + Sbjct: 71 DRFRRDQPQFSLNAMVRLSPATDSTPRLIAAAISGLHSAWRDGYAYKKAGVILIDLVNPA 130 Query: 355 VAQLNLFDDNAPR-PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTT 413 +LF ++ LM +D LN + G+G + + WQM+ SP YT+ Sbjct: 131 NIARDLFSPPPDTGARAQALMNAVDGLNNRMGKGAVGYGLVAKGAPWQMRCGNRSPSYTS 190 Query: 414 RSSDLLRVK 422 DL K Sbjct: 191 DWMDLPVAK 199 >UniRef50_Q5Q9G7 Polymerase kappa isoform 2 n=34 Tax=Deuterostomia RepID=Q5Q9G7_HUMAN Length = 489 Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P+L KP+ V S + N A+ GV+ P F K L Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSM--SMLSTSNYHARRFGVRAAMPGFIAKRL 160 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + ++ N++ Y +S V L + P S+DEA+ ++T ++ + ++ Sbjct: 161 CPQ--LIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNIT--KHLEERQNWPE 216 Query: 122 EIRA 125 + R Sbjct: 217 DKRR 220 Score = 144 bits (365), Expect = 5e-33, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 62/171 (36%), Gaps = 8/171 (4%) Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + +EIR + Q+T LT GIA LAK+ + K + L N + Sbjct: 289 SAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQ----ILPNRQAVMD 344 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEP 233 + LP+ V GIG+ K L A+GI T +L + F+ + G Sbjct: 345 FIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQ-RALLSLLFSETSWHYFLHISLGLG 403 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 L ++ + R+F E I + A+ L+ E Sbjct: 404 STHL-TRDGERKSMSVERTFSE-INKAEEQYSLCQELCSELAQDLQKERLK 452 >UniRef50_B5GWK1 Putative uncharacterized protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GWK1_STRCL Length = 333 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 112/284 (39%), Gaps = 15/284 (5%) Query: 83 RVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLTDFGREIRATVLQRTHLTVGVGIA 140 R++ L E++PRV+ +A C++TG D R IR L + +G A Sbjct: 23 RLLDLLREVTPRVQALPPADADCEVTGGPRAFDGDPGALARLIRTRALTFHGVVTSIGCA 82 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 + +TLA +A AA V+ + E + PV + G+G ++ L G+ Sbjct: 83 ENRTLAAMAADAAGP----GRTVLIPRHPEAVAGFLRPRPVTALPGVGPATARLLVHHGL 138 Query: 201 KTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 +TV +ADT + +R+ +R G + P +F D Sbjct: 139 RTVGAVADTPLPTLRRLLGAAEGQRLSERAHGVDHRPVSPGEPPA-FRTAGHAFARDELD 197 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 R+A+ + A R +LRS+ + ++ ++ + + + L P+ Sbjct: 198 PGRRRRAVAALAERIGGRLRSDGRIAGRLTLTVRYADGS------TTARDRALPEPSHSG 251 Query: 320 RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL-FD 362 +++AA +++ R + + G+ + A L FD Sbjct: 252 PVLVSAACSLYESLGLQRARVRGLSLRAGELLPEAYAATQLGFD 295 >UniRef50_C1E586 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E586_9CHLO Length = 611 Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats. Identities = 77/350 (22%), Positives = 120/350 (34%), Gaps = 65/350 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKP-VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D +AF+ E P L G P + V + D VIA +A AK GV P + Sbjct: 14 VILHVDADAFFCQVERRRNPALAGCPALAVQQHQD--VIAADAGAKKAGVTKRTPPADAR 71 Query: 60 DLFRRCGVVCFSSN--------YELYADMSNRVMSTLEELSPR------------VEIYS 99 L RR G + Y Y S+ + S L VE S Sbjct: 72 ALLRRVGGALVHVHTTTGQRVSYRPYLAASHELHSLLASADLAREVSRDGFNGVAVEKAS 131 Query: 100 IDEAFCDL-TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR 158 IDEA+ L TG D IR V R + V VG+A K LAKLA +AK R Sbjct: 132 IDEAYVQLPTGSDLRVDGARCADVIRDVVKARLGIVVSVGVAHNKLLAKLAGASAKPDGR 191 Query: 159 QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIK-TVLDLADTDIRFIRK 216 + + + E L++ P ++ G G ++ K+ A +G+ TV DLA + Sbjct: 192 R-----VIVSREDIADLLATTPAHELPGCGGALAAKIRATLGVTATVADLARLPESALVS 246 Query: 217 HFNVV---LERTVRELRGEPCLQLEEFAPT-KQEIICSRSF------------------- 253 GE + + + S Sbjct: 247 ALGANPATARLIHARSAGECDDPVRRGRGILNKSVGVHTSLTLTPRAMYGVPGCGVSASG 306 Query: 254 -------GERITDYPSMRQAICSYAARAAEKL----RSEHQYCRFISTFI 292 R + + + + A+ A ++ +E ++ R ++ + Sbjct: 307 GRPGMFEPLRCRETGRLDSLLRAMASDLAGRVMDLAHAEKRWPRTMTVSL 356 >UniRef50_Q38C71 DNA polymerase eta, putative n=4 Tax=Trypanosoma RepID=Q38C71_9TRYP Length = 525 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 78/478 (16%), Positives = 143/478 (29%), Gaps = 119/478 (24%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D++ FYA E V D +P V+ + G +IA N A+ G+ D + Sbjct: 4 IAHIDMDCFYAQVEAVRLGVDCRTEPYVL--SQWGNLIAVNYPARKFGIGRFDTVTDALE 61 Query: 61 LFRRCGVVC--------FSSNYEL-------------YADMSNRVMSTLEELSPR-VEIY 98 + Y Y + S ++ L+ VE Sbjct: 62 KCPHVKISHVATYAAGEVEYRYHENPSKQTHKVALEPYREASRKIFRILDSFDGVEVEKG 121 Query: 99 SIDEAFCDLT----------------GVRNCRDL------------TDFGREIRA----- 125 S+DEAF D+T G D+ + ++ Sbjct: 122 SVDEAFLDVTKAAHMKQGEMGLLSSQGELRLEDVADPTTIVIPSRQAEIAAWLKEHGREF 181 Query: 126 ----------------------------TVLQ----RTHLTVGVGIAQTKTLAKLANHAA 153 T+ Q GIA K LAK + Sbjct: 182 SDVFDVTLHPQPTAENMSLLAAASRVVWTIRQKIYDELRYDCSAGIAHNKLLAKSISARH 241 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK--KLDAMGIKTVLDLADTDI 211 K Q+ L + +M LP + G G + + +L G +T + + Sbjct: 242 KPNQQ------TLLFPDCVASVMWDLPFKSIRGFGGKFGEVVRLACGGKETCREAWLHSL 295 Query: 212 RFIRKHFNVVL--ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICS 269 + K F V E R LRG ++ E + ++ S++F + +++ + Sbjct: 296 CAMSKFFESVGDAEYAYRRLRGYDEGKIRE-RSISKSLMASKAFSPPSSTANGVQKWVTV 354 Query: 270 YAARAAEK----LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 + + + + + + L++P + + L + +++A Sbjct: 355 LSGELSARYEDFCNTYGVKGHSFNVKLG--NRGLDQPSSVANKTFPLPELV-TPQTLVSA 411 Query: 326 ATRSLDAI--WQAGHRYQKAGVMLGDFFSQG-------VAQLNL--FDDNAPRPGSEQ 372 A + + AI + G + +G F Q Q L F E+ Sbjct: 412 AMQCVTAIMANRPGVVVNAVMLTIGSFKKQESDESGVRSQQTTLRDFFKLKNPGKRER 469 >UniRef50_Q9Y253 DNA polymerase eta n=14 Tax=Amniota RepID=POLH_HUMAN Length = 713 Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats. Identities = 71/399 (17%), Positives = 116/399 (29%), Gaps = 100/399 (25%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL---SNNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ F+ E P L KP V+ S G +IA + EA+A GV Sbjct: 8 VVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADD 67 Query: 58 QKDLFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K L + +N Y + S VM + + +E SIDEA+ DLT Sbjct: 68 AKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDLTSAVQ 126 Query: 113 CRDLTDFGREIRATVLQRT---HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 R G+ I A +L T L T A +K + G+ + Sbjct: 127 ERLQKLQGQPISADLLPSTYIEGLPQ----GPT-----TAEETVQKEGMRKQGLFQWLDS 177 Query: 170 ERQRKLMSA---LPVDDV-------------------------------WGIGRRISKKL 195 + L S L V V G+ + + L Sbjct: 178 LQIDNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTL 237 Query: 196 DAMGIKTVLDL-ADTDIRFIRKHFNVVLE------------------------------- 223 + G +V L + IR IR + Sbjct: 238 VSHG--SVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNG 295 Query: 224 -RTVRELRGEPCLQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRS 280 RG ++ + I CS++F + ++ + A E+L Sbjct: 296 SWLYAMCRGIEHDPVKPRQLP-KTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTK 354 Query: 281 EH----QYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 + + + I+ ++ L Sbjct: 355 DRNDNDRVATQLVVSIRV---QGDKRLSSLRRCCALTRY 390 >UniRef50_C8VFX8 DNA polymerase iota, putative (AFU_orthologue; AFUA_4G11140) n=3 Tax=Eurotiomycetidae RepID=C8VFX8_EMENI Length = 573 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 70/470 (14%), Positives = 129/470 (27%), Gaps = 126/470 (26%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D + FYAS +P L P+ V V+ N EA+ G++ + K Sbjct: 12 IILHFDYDCFYASVFEAEQPILKTLPLAV--QQKQIVVTCNYEARRRGLRKLQLIKEAKQ 69 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEE--LSPRVEIYSIDEAFC------------- 105 + V+ + + D S + RVE DE F Sbjct: 70 ICPDV-VIILGEDLTKFRDASKDLYLFFRRSIWGERVERLGFDEIFMDVTDMITYNAGLL 128 Query: 106 ---DLTGV------------------------------------------RNCRDLTDFG 120 DLT + F Sbjct: 129 NPNDLTHSFFHLDSRDPTVGFAFDATAVYGRTYPNDRSGKPLSEADTQLHLRLLLASHFA 188 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ---TGGVVDLSNLERQRKLMS 177 +R+ + + T GI+ +K LAK+ A K + + + Sbjct: 189 GYLRSQLENQKGYTATAGISTSKLLAKVVGSAHKPNNQTTLLPPYSSTGDCESNVLRFLD 248 Query: 178 ALPVDDVWGIGRRISKKLDAMGIK-----------TVLDLADTD---IRFIRKHFNVVLE 223 + + + GIG ++S+KL + I T+ D+ + + Sbjct: 249 SREIRAIPGIGSKLSRKLISH-ITASDQSAVENKVTIRDVRAFPGMGPSLLERILGGPGA 307 Query: 224 ------RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 + L G Q+ E T +I S+G + + ++R+ + S AA + Sbjct: 308 PRDIGVKIWGLLHGVDGTQVGEARDTPTQISIENSYGH-LDTFEAVRKEMLSLAASLIRR 366 Query: 278 LR------------------------SEHQYCRFISTFIKTSPFALNEPYYGNSAS---- 309 +R R + + T P + + S Sbjct: 367 MRMDLTERYSDAEGSTSLGPRLREETKARWLARPRTFRLSTIPRSTQGSDHTYSRRSHSA 426 Query: 310 ------VKLLTPTQ--DSRDIINAATRSLDAIWQA--GHRYQKAGVMLGD 349 L P R + AT + + G + + + + Sbjct: 427 SLPQYVFNLDEPIDALAERVVRELATPMFRKLHRERTGWNLRVLNLAVTN 476 >UniRef50_D1ZXB0 C-terminus not complete (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZXB0_SORMA Length = 299 Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats. Identities = 78/179 (43%), Positives = 107/179 (59%), Gaps = 8/179 (4%) Query: 13 SCE--------TVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 S E VF P L KP++VLSN DGC IAR+ EAKAL +KMG P FK +D+ R Sbjct: 121 SVEVWGVVRASRVFDPSLRDKPLIVLSNGDGCAIARSEEAKALHIKMGAPMFKIRDIVRE 180 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIR 124 G+ SS+YELYADM+ R L E S VE+YSIDE+F L + N + Sbjct: 181 HGIQYRSSSYELYADMNRRFNQVLAEHSCTVEVYSIDESFFRLPVLPNGLGDVAAAHRVI 240 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 A V + T L + +G+ T+TL+K+AN AK ++ GVVDL ++E +R+L + PV++ Sbjct: 241 AAVKRATGLPIRIGLGPTRTLSKVANALAKASEKVWKGVVDLHDIELRRRLFAQWPVEE 299 >UniRef50_UPI00003828C5 COG0389: Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003828C5 Length = 208 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 11/199 (5%) Query: 198 MGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 GI TV +LADTD+ ++ G ++ + + +F Sbjct: 1 WGIWTVAELADTDVASLQAAVGKVSGAHLHDLAWGRDSRPVQPERSER-SVGAETTFEHD 59 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 + D +++ + A R A +LR + R +S ++TS F + + L PT Sbjct: 60 LRDLAAVQARVLELADRCAGRLRHQGLVARTVSVKVRTSDFR------TVTRARTLGAPT 113 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QGVAQLNLFDDNAPRPG-SEQL 373 +R+I A + + G + GV + V Q L + + Sbjct: 114 DVAREIYLVARELVAGVDLRGLAVRLVGVRAEGLEPRAEAVVQPTLEEAVVGTNAVRRRA 173 Query: 374 MTVMDTLNAKEGRGTLYFA 392 +D + + G ++ Sbjct: 174 EEAVDAVRGRFGVRSIAMG 192 >UniRef50_O42917 N-acetyltransferase eso1 n=1 Tax=Schizosaccharomyces pombe RepID=ESO1_SCHPO Length = 872 Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats. Identities = 55/440 (12%), Positives = 131/440 (29%), Gaps = 102/440 (23%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D +AFYA E+V P+ V +IA N A+A + + + K Sbjct: 28 VVAHIDQDAFYAQVESVRLGLDHSVPLAV--QQWQGLIAVNYAARAANISRHETVTEAKK 85 Query: 61 LFRRCGVVCFS----------------SNY-----ELYADMSNRVMSTLEELSPRVEIYS 99 NY + Y S ++++ +++ +P V+ S Sbjct: 86 KCPELCTAHVKTWKAGESEAKYHENPNPNYYKTCLDPYRHESVKILNIIKKHAPVVKKAS 145 Query: 100 -------------------------------------------------IDEAFCDLT-- 108 I+E D T Sbjct: 146 IDECFIELTSDVKRIVLEEYPYLKIPSEDSNVALPQAPVLLWPAEFGMVIEEEVVDRTKE 205 Query: 109 GVRNCRD------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 D +EIR + + T G++ L+KL + K ++ Sbjct: 206 DYERDWDDVFLFYAAKIVKEIRDDIYLQLKYTCSAGVSFNPMLSKLVSSRNKPNKQ---- 261 Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRI-SKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 + + + +L + D+ +G + + ++ +G ++ D+ + + F+ Sbjct: 262 --TILTKNAIQDYLVSLKITDIRMLGGKFGEEIINLLGTDSIKDVWNMSMDFLIDKLGQT 319 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG-ERITDYPSMRQAICSYAARAAEK-L 278 G ++ + ++ +++F +++ +A+ + L Sbjct: 320 NGPLVWNLCHGIDNTEITTQVQI-KSMLSAKNFSQQKVKSEEDAINWFQVFASDLRSRFL 378 Query: 279 RSEH-QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ-DSRDIINAATRSLDAIWQA 336 E + + I + + S S ++ ++ I+ A ++ L + Q Sbjct: 379 ELEGMRRPKTICLTV-------VSRFLRKSRSSQIPMNVDISTQFIVEATSKLLRQLQQE 431 Query: 337 --GHRYQKAGVMLGDFFSQG 354 + + + Sbjct: 432 FDVYPISNLSISFQNIIEVD 451 >UniRef50_C7YPE8 Putative uncharacterized protein n=2 Tax=Nectriaceae RepID=C7YPE8_NECH7 Length = 564 Score = 156 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 67/427 (15%), Positives = 121/427 (28%), Gaps = 110/427 (25%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D + FYA P L PV V C+ N A+ALG+K + K L Sbjct: 22 DYDCFYAQVFENKNPALKKLPVGV--KQKNCLSTCNYNARALGLKKLMSVSEAKRLCPEL 79 Query: 66 GVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR--------- 114 ++ + + D S + + + S +VE DE F D+T + Sbjct: 80 VLMDGE-DLTPFRDTSKILFNYFKTFSWNHKVERLGFDEVFMDVTDIVEYNLLCLNKASL 138 Query: 115 ------------------DLTDFG----------------------------REIRATVL 128 DLT + +R + Sbjct: 139 ADSFFCLSKQDPERGFQCDLTSIAGCVQDTASQDLDTESPAYLRLLLGSHFAQFLRLQIE 198 Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG 188 ++ T GIA K L+KL K + T + + + + + G+G Sbjct: 199 EKFGFTSTCGIATNKMLSKLVGGNNKPRNQTTLLALT---QDEAIAFLDDHKLRKIPGLG 255 Query: 189 RRISKKLDAM-GIK----------------TVLDLA---DTDIRFIR-KHFNV-----VL 222 +I + L G TV + + I V Sbjct: 256 FKIVEVLGGHVGADMSAAMPEMPEMRDVPVTVGQVRLHPNISPGIIETLLMGPGAEKGVG 315 Query: 223 ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH 282 R L G +++E + +I ++ + + P + + + + ++R + Sbjct: 316 SRIWGLLHGVDPTEVKEASDMPSQISIEDTY-KGLETVPQITEELHKLSCSLVRRMRVDL 374 Query: 283 QY----------------CRFISTFIKTS---PFALNEPYYGNSASVKLLTPTQDS-RDI 322 + + +++ A + S S L D DI Sbjct: 375 LVPDQNSDVPGSQRWIARPKTLRLSVRSWAQLQSAQSHNSGRVSRSAPLPNFVFDVKDDI 434 Query: 323 INAATRS 329 A R Sbjct: 435 DRIAERL 441 >UniRef50_B6K7S5 Sister chromatid cohesion protein Eso1 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K7S5_SCHJY Length = 884 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 58/443 (13%), Positives = 129/443 (29%), Gaps = 104/443 (23%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AFYA ETV P+ V +IA N A+ G+ D K Sbjct: 28 VVVHVDQDAFYAQVETVRLKLDHSVPLAV--QQWDNLIAVNYAARPYGITRFDTAENAKK 85 Query: 61 LFRRCGVVCF--------SSNY-------------ELYADMSNRVMSTLEELSPRVEIYS 99 + Y ++Y + S +++ L + S V+ S Sbjct: 86 KCPELNLAHVQTWKVGEREPKYHEKPEWESHKVCLDMYRNESKKILGILSKYSKLVKKAS 145 Query: 100 IDEAFCD-------------------------------------------------LTGV 110 IDE+F D L+ Sbjct: 146 IDESFVDLTAEIKKKLIQDYSFLGVPPEDLSLPLPTAPTVLWTEELGRVFGEEEGLLSEA 205 Query: 111 RNCRDLTD--------FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 +N D + +EIR + T GI++ L+K+ + K ++ Sbjct: 206 KNGGDWDEVFLHYGARIVKEIRNEIFNTLGYTCSAGISRNAMLSKILSSKNKPNKQ---- 261 Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVV 221 + ++ + + ++ G + ++L + + + D+ + + + Sbjct: 262 --TVLLNSMVDHYLADVRLSELRLFGGKYGEELGKKLNAEYIKDIRAIPMDELIRILGDR 319 Query: 222 -LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKL- 278 + G ++ T Q ++ +++F ++ + +A+ + Sbjct: 320 DAQVVWNVCNGIDNSEITNVNNT-QSMLSAKNFLRSKLKSSEEAMKWFRVFASDLMSRYM 378 Query: 279 -RSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ--DSRDIINAATRSLDAIWQ 335 + + + + T S+ + P+ + N A + L + Sbjct: 379 DVEQIKRPKTFVLNVVTGNLRKG-------RSIPIA-PSDAISEEFVYNNAAKLLAQLAS 430 Query: 336 AG--HRYQKAGVMLGDFFSQGVA 356 A V +F + Sbjct: 431 AYDIFPIVHLSVSFRNFEDRDTK 453 >UniRef50_UPI00019102E2 DNA polymerase IV n=4 Tax=cellular organisms RepID=UPI00019102E2 Length = 109 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 4/108 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+A+ E P L P+ + + G + N A+ GV+ P Sbjct: 4 IIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARQFGVRSAMPTAMAL 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 L + ++ Y + S V + +E S+DEA+ D+ Sbjct: 64 KLCPHLTL--LPGRFDAYKEASRHVRDIFSRYTSLIEPLSLDEAWLDV 109 >UniRef50_UPI0001792F1F PREDICTED: similar to polymerase (DNA directed), eta n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792F1F Length = 641 Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 76/439 (17%), Positives = 130/439 (29%), Gaps = 112/439 (25%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL---SNNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E L GKPV V+ S G +IA N EA+ GV Sbjct: 9 VIALVDMDCFYCQVEVQHNQSLTGKPVAVVQYNSWRGGGIIAVNYEARDKGVNRHMRGDD 68 Query: 58 QKDLFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 +V ++ Y S +V L + S V+ SIDEA+ DLT V N Sbjct: 69 ALQACPDLNLVRVKELHGKADLSKYRTASQKVFEVLSQFSSCVQRASIDEAYVDLTSVVN 128 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK-KWQRQTGGVVDLSNLER 171 ++ V+ L + ++ +K K + + D+ N E Sbjct: 129 HHISSN------HNVITENDL-------PNTFVEGYSDDNSKDKNKNLKSWLHDVYNNEL 175 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDA-----------MGIKTVLDLADT----------- 209 Q + L IG + +KL GI L+ Sbjct: 176 QDDYLLRLT------IGAMMVEKLRQSIFEQTGFRCSAGIANNKILSKLACGLHKPNQQT 229 Query: 210 --------------DIRFIRKHFNVVLERT------------------------------ 225 I+ ++ + ER Sbjct: 230 MLPPSSVPHLFETIPIKKVKNLGGKLGERIRQEFNCEFMSDLAAIPLNDLQQKFNDKTCN 289 Query: 226 --VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE-- 281 + +G + E + I +SF + ++Q + + +KL+ + Sbjct: 290 FLYQISKGIDNEPV-ESRLIPKSIGSCKSFPTGLKVKEEIKQWLNTLMNDIVDKLKDDYE 348 Query: 282 --HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL------DAI 333 + ++ ++ P S T +++ A SL Sbjct: 349 ANKRKATLMTVSVRYLDKKTKLPT-----SQCFEVTTYSHNKLLDTAYSSLCTMTENQKS 403 Query: 334 WQAGHRYQKAGVMLGDFFS 352 Q + GV +G F Sbjct: 404 LQWKNPISFLGVAIGRFVE 422 >UniRef50_A8N619 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8N619_COPC7 Length = 484 Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 81/223 (36%), Gaps = 22/223 (9%) Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +R V T LTV GIA K LAK+ + K + + + M +L + Sbjct: 1 MRKAVFDETQLTVSAGIAPNKMLAKICSDKNKPNGQFKLEF----EPDSIKAFMHSLSIR 56 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTD--IRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V G+GR + LD++GI+T D+ I + K F L+ +R G + Sbjct: 57 KVPGVGRVNERLLDSIGIRTCGDIYQQRGVIALMDKRFG--LDFLLRVYLGIASNHVAPH 114 Query: 241 -APTKQEIICSRSFGERITDYPSMRQAICSYAAR-------AAEKLRSEHQYCRFISTFI 292 ++ I R+F +++ ++ + A+ E ++ E + ++ Sbjct: 115 AREERKSIGAERTFSTLDSNHADPKKGSVAIVAKLEEVAEELVEDMKREGWVGKTVTLKY 174 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 K + S + ++ N L + + Sbjct: 175 KLDTYQTFTRAKQFSKWITTKE------ELFNTGKELLLSRFP 211 >UniRef50_B7ANI6 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANI6_9BACE Length = 194 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 8/189 (4%) Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 + ALPV D+ +GR ++KL IKT+ DL TD F+ + Sbjct: 2 YKSEFKHKAWALPVGDLLYVGRSTNQKLTKFRIKTIGDLTRTDEAFLHSQLGKMGNILWS 61 Query: 228 ELRGEPCLQL--EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 G + E + + S + + + ++ + A A +LR C Sbjct: 62 FSNGYDDSPVKKENTHAPIKSVGNSTTTPRDLENDGDVKIVLYILAESVAARLRENGFRC 121 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 R + ++ + + + K+ T + +I A + + + + GV Sbjct: 122 RVVEISVRDNE------LFSFTRQKKIDHATNITGEIAAYAYQIVKENYHWQKPIRSVGV 175 Query: 346 MLGDFFSQG 354 D + Sbjct: 176 RGADLVTDS 184 >UniRef50_A9SDY0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SDY0_PHYPA Length = 680 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 124/360 (34%), Gaps = 54/360 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA+ E V +P+ V +IA N A+A+G+ + + Sbjct: 9 VVLHADLDCFYAAVEQVRLGIPTEQPLAV--QQWDGLIAVNYAARAVGIVRHERVSEALR 66 Query: 61 LFRRCGVVCF--------------------SSNYELYADMSNRVMSTLEELSPRVEIYSI 100 +V ++ E Y S +V + S E SI Sbjct: 67 KCPDLHLVHVETIGGDKPGTPESLGPRGNAKASLERYRQASAKVFNIFRRYSKLCERASI 126 Query: 101 DEAFCDLTGVRN--CRDLTDFGREIRATVLQRTHL-TVGVGI------AQT--------- 142 DEA+ D++ D+ E+ +L+ T T G+ + Sbjct: 127 DEAYLDVSEQVEEMLEKDMDWESEL-HRLLEPTGSETTSKGVPVMLIEGGSLAIYNAYDR 185 Query: 143 KTLA-KLANHAAKKWQRQTGGVVD-LSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMG 199 + LA + + R G + LM ALP+ + +G ++ +++ G Sbjct: 186 RLLAGSIIADRMRASVRNELGYTISVIPPRAVPGLMKALPLKKIKLLGGKLGEEMTKKWG 245 Query: 200 IKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 T + + F + + ++G Q++ + ++ S+SFG I Sbjct: 246 CTTAGEAQQIPHAALVACFGDRLGTYAWKAVQGLKAEQVQ-VKDLVKSMLASKSFG-AIN 303 Query: 259 DYPSMRQAICSYAARAAEKLRSE----HQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 + +R+ + + A ++ + + + + ++ F + + S S + Sbjct: 304 ELAGIRRWLSVLSHDLAIRMSRDFEMNQRQPKVFQLYYRSGKFKNSADH---SRSAPMPR 360 >UniRef50_C9SAM9 Putative uncharacterized protein n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SAM9_VERA1 Length = 609 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 59/415 (14%), Positives = 113/415 (27%), Gaps = 117/415 (28%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D + FYAS P L P+ V + N A+A GV+ + + Sbjct: 63 DYDCFYASVLESQNPALKSLPLGV--KQKSILATCNYVARARGVRKLMRISAARKICP-- 118 Query: 66 GVVCFSS-NYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCR-------- 114 +V + + D+S + + L S +VE +DE F D+T + N Sbjct: 119 DLVVVEGEDLTPFRDVSKSLYAFLRGHSWSGKVERLGLDEVFMDVTDMINYNMSCLNKLT 178 Query: 115 -------------------DLTDFGREI--------------RATVLQRTH--------- 132 DLT + +A V Sbjct: 179 LADSFFCLSKTDPEKGFPCDLTKMAGRVHGVPPPAGEQQLENQAYVRLLLGSHLAWYLRT 238 Query: 133 -------LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 T G+A K L+KL K + T + M + + + Sbjct: 239 NIEEKYGFTSACGVATNKLLSKLVGSKKKPRNQTT---LLALENGSAVDFMDSYTIRKIP 295 Query: 186 GIGRRISKKLDA--MGIK------------TVLDLADTD---IRFIRKHFN------VVL 222 GIG + ++ L+ + + + + + + Sbjct: 296 GIGGKTTQLLEKRLLNFHKEIDSYETESALSAQQVRLHPEIYPETLETLLSGPGSEQGIG 355 Query: 223 ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR--- 279 R L G ++++ +I ++ + + + + + A ++R Sbjct: 356 VRIWNLLHGVDYTEVKDARDVPSQISIEDTYRQ-LDSLVQIEEELKKLAISLLRRMRVDL 414 Query: 280 ---------------------SEHQYC--RFISTFIKTSPFALNEPYYGNSASVK 311 S+ R + I+ P + S S K Sbjct: 415 TTANDALTHSSSVDQNTLEGQSQRWMAHPRTLRLSIRLWPVEGERDDWNFSRSSK 469 >UniRef50_C8VB00 DNA polymerase eta (Eurofung) n=19 Tax=Eurotiomycetidae RepID=C8VB00_EMENI Length = 674 Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats. Identities = 70/448 (15%), Positives = 126/448 (28%), Gaps = 124/448 (27%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CE V +P+ V +IA N A+ G+ + K Sbjct: 44 VIAHIDLDAFYAQCEMVRLGTPRERPLAV--QQWDSLIAINYPARKFGITRMISAKEAKA 101 Query: 61 LFRRCGVVCF------------------------SSNYELYADMSNRVMSTLEE-----L 91 + + Y S +++ T++ Sbjct: 102 KCADIVLQHVATFREGEGGKWAYREDAWKNIGTDKVCLDPYRAESRKILGTIKRELSKCY 161 Query: 92 SP-------------------RVEIYSIDEAFCDLTGV---------------------- 110 S VE S+DE F DL+ + Sbjct: 162 SELNGDLSGLGLSSQIKLQEALVEKASVDEVFIDLSPLVFGVLLQRYPEMREKPHGDDRV 221 Query: 111 ----------------------------RNCRDLTDFGREIRATV--------LQRTHLT 134 + D D I A + T Sbjct: 222 ALLPCPPTTALEWDTEDCLVDLDENETEVDDPDWDDVAMLIGAEIVRSVRTAVWNSLSYT 281 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 GIA+ K +AKL + K ++ + + +S + +G ++ + Sbjct: 282 CSAGIAKNKMMAKLGSATNKPNKQ------TVVRNRAIQNFLSGFKFTKIRMLGGKLGDQ 335 Query: 195 LDAM-GIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 + AM G + + +L + R N +RGE ++ + ++ ++S Sbjct: 336 VTAMFGTEQISELLKVSLEQFRAKLNDDTAVWLYGIIRGEDKSEVNP-RTQIKSMLSAKS 394 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 F I + + +AA +L E + + AL+ S +L Sbjct: 395 FRPSINTLDQADKWLHIFAADIYGRLVEEGV----LEHKRRPKTIALHHRQGAQVKSRQL 450 Query: 313 LTP---TQDSRDIINAATRSLDAIWQAG 337 P T D + L I G Sbjct: 451 PIPGSATIDEDLLFELGKTLLRQIAADG 478 >UniRef50_C9SHT7 DNA polymerase IV n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SHT7_VERA1 Length = 563 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 4/136 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+L KPVV+ + + + N ++ GVK G K Sbjct: 25 ILHVDFDSFFCAVSLKKHPELVDKPVVIAHSPGHGSEIASCNYPSRKFGVKNGMWMKKAV 84 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 +L + ++ Y + S + + V+ S+DEA D++ DL Sbjct: 85 ELCPE--LKVLPYDFPAYEEASALFYEAILTVGGIVQSVSVDEALLDVSAALRPGDLRGL 142 Query: 120 GREIRATVLQRTHLTV 135 G ++ +T T Sbjct: 143 GAQMTKLEPIKTGPTA 158 >UniRef50_Q0V979 Zgc:136881 n=6 Tax=Eumetazoa RepID=Q0V979_DANRE Length = 294 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 54/289 (18%), Positives = 92/289 (31%), Gaps = 76/289 (26%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E +P+L KP VV G +IA + EA+A GV Sbjct: 8 VVALVDMDCFYVQVEQRLKPELKNKPCVVAQYKTWKGGGIIAVSYEARAHGVGRNMFADD 67 Query: 58 QKDLFRRCGV----------------------VCFSSNYELYADMS--NRVMSTLEELSP 93 + L V + S + + S M + Sbjct: 68 ARKLCPDLQVARVPEAHGKADLTHYREASVEVIEVMSRFAVIERASIDEAYMDLTASVQE 127 Query: 94 RVEIYSI---------------------------DEA-------FCDLTGVRNCRDLTD- 118 R++ S+ D + DL D Sbjct: 128 RLKNTSVQDITAQQLKNTHIQGFPTQQENTHLDRDAQRAAGLQQWLDLLSSSTESSPADL 187 Query: 119 -------FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 ++RA V + T GI+ K LAKLA K ++ + L Sbjct: 188 RLAVGALIVEQMRAAVEEHTGFRCSAGISHNKVLAKLACGLNKPNRQ------TVLPLSS 241 Query: 172 QRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFN 219 +L S LP+ + +G ++ + + + ++ + DL + +HF Sbjct: 242 VPQLFSTLPISKIRNLGGKLGSSITETLSVENMGDLTRFSRAQLEQHFG 290 >UniRef50_B7FW32 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FW32_PHATR Length = 592 Score = 145 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 77/438 (17%), Positives = 146/438 (33%), Gaps = 90/438 (20%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + L D++ FYA CE V D P+ +L V+A A+ G+K GD W Sbjct: 37 VVLLLDLDCFYAQCECVRLGWDAMEIPLALL--QWDSVLAVTYPARKYGIKRGDSWDTVH 94 Query: 60 DL----FRRCGVVCFSSNYELYADMSN----RVMSTLE-ELSPRV--EIYSIDEAFCDLT 108 V ++N ++ V++ +E + V E SIDE F D+T Sbjct: 95 QKSQGACYAVHVPILTTNGSRTDRVATLPPGEVLAWVENQFGDNVVLERASIDEFFLDVT 154 Query: 109 GVRNCRDLTD---------------------------------------------FGREI 123 V D R I Sbjct: 155 NVCYLESTLDVCDLGSNNSLEGALQETAVVGQSEIMTLVRNGMDVDVEALQRGAHLARCI 214 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 R V T+ GI KT+AKL+ K + ++ + L++ + Sbjct: 215 RDEVRTLLGFTLSAGIGSNKTIAKLSAAYGKPNGQA------ITYPQFVDTLLADTEIRK 268 Query: 184 VWGIGRRISKKLDAM----GIKTVLDLAD-TDIRFIRKHF-NVVLERTVRELRGEPCLQL 237 +G ++ K + A+ TV +A + + +HF R RG + Sbjct: 269 CRNLGGKLGKTVQALLPADAPTTVHSIAKYLSLPTLEQHFEAPTAAWVYRVARGVDTEPV 328 Query: 238 EEFAPTK--QEIICSRSFGERI--TDYPSMRQAICSYAARAAEKLRSE----HQYCRFIS 289 + + I +S + D+ S+ I A ++ + +Y + + Sbjct: 329 ASKNESALTKSITAFKSLPFDVQGHDWESLASWIRLLADEIVSRVERDASRNGRYPKSCT 388 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDS------RDIINAATRSLDAIWQAGHRYQKA 343 +A N + S+++ P + ++ +++ A +G R ++ Sbjct: 389 I-----QYAGNGTTGQRNKSIRVPFPAERLSKNKKIDELCGVVPKTVQAKENSGFRLRRI 443 Query: 344 GVMLGDFFSQGVAQLNLF 361 G+ DF ++ + ++ F Sbjct: 444 GLCAIDFRNRPASGIDRF 461 >UniRef50_B2B126 Predicted CDS Pa_3_8130 n=2 Tax=Sordariales RepID=B2B126_PODAN Length = 575 Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats. Identities = 52/358 (14%), Positives = 102/358 (28%), Gaps = 90/358 (25%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA C P L P+ + + N A+ GVK + K Sbjct: 23 VILHFDLDCFYAQCIENANPHLKSVPLGI--KQKSILATCNYVARKHGVKKLMGIQEAKR 80 Query: 61 LFRRCGVVCFSS-NYELYADMSNRVMSTLEELS--PRVEIYSID---------------- 101 L +V + + D+S ++ S L+ S RVE +D Sbjct: 81 LCP--DLVLADGEDLSPFRDVSKQIYSLLKSYSWNGRVERLGLDEVFLDVTDVVAYNLGL 138 Query: 102 -------EAFCDL---------------------------------TGVRNCRDL--TDF 119 E++ L T R L + Sbjct: 139 VNHHCLEESWFCLSREDPERGFAFDAREVEGCVWPPDFVSDRENEGTDSLRLRLLFGSHL 198 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +R ++ T GI+ K LAKLA K + L + + L Sbjct: 199 AFYLRQQ-MEGLGYTSACGISTNKLLAKLAGDRNKPRNQT-----TLLSSHSPLPFLDPL 252 Query: 180 PVDDVWGIGRRISKKLDA----------MGIKTVLDLADTDIRFIRKHF--------NVV 221 P+ + GIG + + + + + + + + Sbjct: 253 PLRKIPGIGGKTITAMKSLLKTDDDDDGLTVHNARTNPAVSPFALERLLAGSGSGGEKGI 312 Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 ++ L G +++ ++I ++ +T +R + ++ Sbjct: 313 GQKVWLLLHGIDGSEVKPTMDVPRQIGIEDTY-RGLTQLSQVRAGLVQITTSLLRRMH 369 >UniRef50_Q92ZK0 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti RepID=Q92ZK0_RHIME Length = 244 Score = 139 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 29/186 (15%), Positives = 66/186 (35%), Gaps = 20/186 (10%) Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + +R + K LAK+A+ K + + + + L Sbjct: 71 AQRLRRHLY-------------NKFLAKMASGQNKPDGQF------VITPKNGPAFVEQL 111 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ G+G ++K+ +GI+T DL + + F+ +HF RG Q++ Sbjct: 112 PIKKFQGVGPATAEKMHRLGIETRADLKEQTLEFLVEHFGESGPCFYGIARGIDNCQVKA 171 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + + E I + + R+ + + + + + +K + F Sbjct: 172 DR-VRKSVGAEDTSSEDIHSFEAAREGLQPLIEKVWSYCEANEISAKTVPLKVKYADFPD 230 Query: 300 NEPYYG 305 + G Sbjct: 231 HPEQDG 236 >UniRef50_B7FSY6 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FSY6_PHATR Length = 531 Score = 137 bits (347), Expect = 6e-31, Method: Composition-based stats. Identities = 59/415 (14%), Positives = 118/415 (28%), Gaps = 114/415 (27%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FY CE + R +P + ++ N A+ +GV + Sbjct: 64 VIIHLDIDCFYCQCEKLDRNLADDRPFAIG--QKHIIVTCNYAARKMGVGKLESRESAIR 121 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-------VEIYSIDEAFCDLTGVRNC 113 ++ S+ E Y V + V S+DE DLT V Sbjct: 122 KCPSL-LILEGSDLERYRVYGRNVYMAFRRACQQLGGKKMAVCKGSMDEMMVDLTHVDFL 180 Query: 114 RDLTDFGREI-RATVL------------QRTHLTVGV----------------------- 137 + + G + + V +T T V Sbjct: 181 ANTRENGNSLDQVYVYGSRSGEATTLTEDQTGATATVVYDKTASRDTKETRLVRKQYFEA 240 Query: 138 ---------------------GIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 G++ + LAK+A+ K V++ +L+ Sbjct: 241 ASMALAIQNQILEQTGFTTTLGVSNSPMLAKIASGLRKPAT------VNILYPWDATELL 294 Query: 177 SALPVDDVWGIGRRISKKLDA-----MG------------IKTVLDLADTDIRF------ 213 + +P+ V G GRR+ L G T DL + Sbjct: 295 AGMPLRKVSGFGRRMMYALHPSLESYYGSLIPTARSKSSPCWTCSDLLRIPVEEVASCLC 354 Query: 214 ----IRKHFNVVLERTVRELRGEPCLQLEEFAPT-KQEIICSRSFGER-ITDYPSMRQAI 267 + + + V + + +G ++ + + + SF + + + Sbjct: 355 TVNGLEEKASHVALELLEKCKGIDSSKVIDDDGGLSKTVSVENSFRRGTVRTLNDLNHEL 414 Query: 268 CSYAARAAEKLRSEHQYC---------RFISTFIKT--SPFALNEPYYGNSASVK 311 S R +L E C R + ++ S ++ + ++ S + Sbjct: 415 LSLCKRL-PRLLDERLNCSPFPKRAFPRTLRVTVRFVSSLRQQDDKAHSHTRSKQ 468 >UniRef50_C1EEZ5 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299 RepID=C1EEZ5_9CHLO Length = 236 Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats. Identities = 55/234 (23%), Positives = 82/234 (35%), Gaps = 48/234 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E P+ V +IA N A+ GVK + K Sbjct: 10 VVIHLDLDCFYAQVEAKRLGIDPSVPLAV--QQWSGLIAVNYPARHRGVKRHLNVTEAKK 67 Query: 61 LFRRCGVVC--FSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT---------- 108 L V + Y S RVMS L + VE SIDEA+ D+T Sbjct: 68 LVPELVCVHQSRKVSLRRYRRASWRVMSALADRCEHVERASIDEAYVDVTREVDAAIDGR 127 Query: 109 ----------------------------GVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 IRA VL +T T+ G+A Sbjct: 128 TNAEIDEMVRDGVNASGAVVPLTPSTSEHDMRLAIGAHICAGIRAAVLHQTGFTMSGGVA 187 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 K LAKLA+ K ++ + ++M +LP+ + G+G ++ +K Sbjct: 188 HNKMLAKLASARNKPNKQTA------VSARAVTEMMESLPMRSIKGLGGKLGEK 235 >UniRef50_Q6DCL9 Polh-prov protein n=4 Tax=Tetrapoda RepID=Q6DCL9_XENLA Length = 684 Score = 135 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 85/251 (33%), Gaps = 27/251 (10%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+RA V + T GIA K LAKLA K ++ + L S Sbjct: 195 IVEEMRAAVEEETTFQCSAGIAHNKVLAKLACGLNKPNRQ------TILCQGSVPGLFSE 248 Query: 179 LPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 LP+ + +G ++ + + ++ + L ++ ++ HF RG Sbjct: 249 LPIGKIRHLGGKLGTSIKEILDVEYIGQLTQFTVQHLQNHFGDKTGSWLYSLCRGIEDEP 308 Query: 237 LEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSE----HQYCRFIST 290 ++ + I CS++F ++ ++ + + +L+ + ++ + ++ Sbjct: 309 VKPRQLP-KSIGCSKNFPGKTSLSTREQVQYWLLQLSLELEGRLQKDRDANNRVAKLLTV 367 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-------RYQKA 343 + Y S L D++ I + A L + AG Sbjct: 368 GL---NQMGKRLYGSMSRCCALTRY--DAQKISSDAFVLLKSFNAAGMHQAAWSPPLTLL 422 Query: 344 GVMLGDFFSQG 354 + F S Sbjct: 423 QLSASKFSSTE 433 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 9/139 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E P L KPVVV+ G +IA + EA+A GV Sbjct: 8 VVALVDMDCFYVQVEQRMNPALKNKPVVVVQYKTWKGGGIIAVSYEARAFGVTRNMFADD 67 Query: 58 QKDLFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K L + ++ Y + S VM + + VE SIDEA+ DLT Sbjct: 68 AKKLCADLQLARVREAHGKADLTHYREASVEVMEVMSRFA-VVERASIDEAYIDLTDSVQ 126 Query: 113 CRDLTDFGREIRATVLQRT 131 R I +L+ T Sbjct: 127 KRLREMGVAPISGELLKNT 145 >UniRef50_A2WV83 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2WV83_ORYSI Length = 498 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 12/134 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E P+L G+P V+ ND G +IA + EA+ GVK + Sbjct: 13 VIAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K + +V ++ +Y + V++ L + E SIDE + DLT Sbjct: 73 AKMVCPSINLVQVPVARDKADLNVYRSAGSEVVAILSTKG-KCERASIDEVYLDLTDAAK 131 Query: 113 ---CRDLTDFGREI 123 + I Sbjct: 132 EMLLESPPELLELI 145 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 9/140 (6%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++R VL+ T T GIA K LAKL + K Q+ + + + + Sbjct: 217 IVAQLRVKVLEETQFTCSAGIAHNKMLAKLVSGMHKPAQQ------TVVPSSAVQDFLVS 270 Query: 179 LPVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQ 236 LP+ + +G ++ L +G+ TV DL +++++ V + RG + Sbjct: 271 LPIKKMKQLGGKLGSSLQDDLGVNTVGDLLSFTEDKLQEYYGVNTGTWLWKIARGISGEE 330 Query: 237 LEEFAPTKQEIICSRSFGER 256 +E+ + C ++F Sbjct: 331 VED-RLLPKSHGCGKTFPGP 349 >UniRef50_B7ZA36 cDNA, FLJ79050, highly similar to DNA polymerase eta (EC 2.7.7.7) n=9 Tax=Mammalia RepID=B7ZA36_HUMAN Length = 651 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 73/205 (35%), Gaps = 18/205 (8%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+RA + + T GI+ K LAKLA K ++ L + +L S Sbjct: 134 IVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQ------TLVSHGSVPQLFSQ 187 Query: 179 LPVDDVWGIGRRI-SKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 +P+ + +G ++ + ++ +GI+ + +L ++ HF RG Sbjct: 188 MPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDP 247 Query: 237 LEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSEH----QYCRFIST 290 ++ + I CS++F + ++ + A E+L + + + Sbjct: 248 VKPRQLP-KTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVV 306 Query: 291 FIKTSPFALNEPYYGNSASVKLLTP 315 I+ ++ L Sbjct: 307 SIRV---QGDKRLSSLRRCCALTRY 328 >UniRef50_C4JRK3 Putative uncharacterized protein n=3 Tax=Onygenales RepID=C4JRK3_UNCRE Length = 599 Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats. Identities = 54/357 (15%), Positives = 107/357 (29%), Gaps = 86/357 (24%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D + FYAS P L P+ V V+ N EA+ G++ + K + Sbjct: 19 DYDCFYASVFEAENPALKSLPLAV--QQKQIVVTCNYEARRRGLRKLQLIKEAKRICPDV 76 Query: 66 GVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDE--------------------- 102 V+ + + D S + + L++ + RVE DE Sbjct: 77 -VIMLGEDLTKFRDASKELHAFLKKNTWGNRVEKLGFDELLNRHDLQNSFFQLDKFDPTV 135 Query: 103 --AFCDLTGVRNCRDLTD--------------------------FGREIRATVLQRTHLT 134 AF D + + +R + Q T T Sbjct: 136 GFAF-DASTFCGPTYPAEPCPSVKEDGEQLWFSSLDVGLRLGSHLANYLRHQLEQHTPYT 194 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE----RQRKLMSALPVDDVWGIGRR 190 VGI+ +K LAKL + K + T + + + + + GIG + Sbjct: 195 ATVGISTSKLLAKLVGNLNKPRLQTTLRPPYSATDDGQGGNVASFLGQHEIGKIPGIGFK 254 Query: 191 ISKKLDAM------GIKTVLDLA---DTDIRFIRKH--FNVV---------------LER 224 ++ ++ + LA + + +R V + Sbjct: 255 MAHRIRTHILGREPNLDVYEGLAEEDNVSVDVVRSFPGMGPVKLDEIFRGGGWPKDIGTK 314 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 L G ++ +I S+ + + + S+R + + ++ ++ Sbjct: 315 VWGLLNGVDDTEVAVGKAFPSQISIEDSYSQ-VDNLQSVRNELLPLTRKLLRRMHAD 370 >UniRef50_C1E7T2 Umuc-like DNA repair protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7T2_9CHLO Length = 652 Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats. Identities = 50/255 (19%), Positives = 83/255 (32%), Gaps = 35/255 (13%) Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 V T L + GIA K LAKL + K + T KL+S LPV + G Sbjct: 259 VRSATGLRMSAGIAHNKMLAKLVSGLHKPDDQTTL------PAGVAAKLVSPLPVRALPG 312 Query: 187 IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQ 245 +G + L G++T DL + + + G ++ Sbjct: 313 VGHGAERTLVHRGVRTAADLRRVTRSEVCEWLGPRVGRKVHDAAWGVDREEVAPKPAPN- 371 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE-----------------HQYCRFI 288 + C SF T + S+ + A ++ E + R + Sbjct: 372 FVTCEDSF-RSCTTWSSVDAVLAVIAPDLLARMDEEYEDEVERTVGAGALIPAGRAARTL 430 Query: 289 STFIKT-SPFALNEPYYGNSASVKLLTPTQD--------SRDIINAATRSLDAIWQAGHR 339 + + P + +SAS + T D + + AATR L + G Sbjct: 431 TVKWRDVGPGGKGTGWSRSSASTTMPTLANDRSIDAKRRADALREAATRVLRSELTRGFD 490 Query: 340 YQKAGVMLGDFFSQG 354 + V G+F + Sbjct: 491 LRALNVGAGNFEPKA 505 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 4/109 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A DV+AFY+ E + P L G+P+ V ++ N A++ G+K K K Sbjct: 59 IVAHFDVDAFYSQVEELRDPRLRGRPMAV--TQKFLIVTANYAARSAGLKKLMSTTKAKA 116 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG 109 L +V + Y + +V + LE E +DE + DLT Sbjct: 117 LCPEVALVSGE-DLTPYRACAKKVRAALERFG-TCEKLGLDECWVDLTA 163 >UniRef50_A9UR36 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UR36_MONBE Length = 265 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 60/199 (30%), Gaps = 44/199 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA V P+L KP+ V N A+A GV + + Sbjct: 4 VILHFDLDCFYAQVHMVQEPELRLKPLGV--QQKTIFATVNYVARARGVPKMARISEAQR 61 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLT---------- 108 + V+ + Y + S + + L+E P VE +DE F D T Sbjct: 62 ICPDI-VIRNGEDLTDYREASEHIFAFLQEQFPHCPVERLGLDEFFVDATTPAHALCSDG 120 Query: 109 -----------------------------GVRNCRDLTDFGREIRATVLQRTHLTVGVGI 139 + R R + + T GI Sbjct: 121 FWSPTPHFHLTASPNWCGHPAAHAAANLAQYQALRAGAQLTDWARKELKAKFGYTCSAGI 180 Query: 140 AQTKTLAKLANHAAKKWQR 158 A K AK+A K + Sbjct: 181 AVNKLQAKMAGELHKPDDQ 199 >UniRef50_C4QYV7 Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4QYV7_PICPG Length = 614 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 65/483 (13%), Positives = 137/483 (28%), Gaps = 125/483 (25%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A DVNAF+A E + P+V + +IA + A+ G+ D Sbjct: 32 VVAHIDVNAFFAQVEQLRLGLSKEDPLVCV--QWSSIIAVSYSARKYGINRMDTLESALS 89 Query: 61 LFRRCGV----VCFSSN------------------YELYADMSNRVMSTLEELSPRVEIY 98 V V + Y S ++M + +VE Sbjct: 90 KCEGLKVGHTAVFKKGQSDWSYIDYLPSPKDHKVSLDPYRRESRKIMRIFKLRCSKVEKA 149 Query: 99 --------------------------SIDEAF--------------CDLTG--------- 109 S+D++F D G Sbjct: 150 SVDESFLDLGNVVFQKLLELFPVLKNSLDKSFDDYLPEIPEELPEGLDFKGEVIRCPETD 209 Query: 110 ------VRNCRDLTDF-----GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR 158 +++ D+ +IR + + T GI + KT+AKLA+ K + Sbjct: 210 DQDGLVLQDWDDIVMLLASMEAHDIRKQIEKALDYTTSCGIGRVKTIAKLASGLHKPDNQ 269 Query: 159 QTGGVVDLSNLERQRKLMS-ALPVDDVWGIGRRIS----KKL---DAMGIKTVLDLADTD 210 + N ++ D WGIG + S ++L + I + + + Sbjct: 270 TIIRNCAIDN------FLNTHFKFTDFWGIGPKTSGIIKQRLLVPEEDSIGYIKENFTQE 323 Query: 211 IRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF-GERITDYPSMRQAICS 269 ++ + R + +RG + + + +++F G+ + + + Sbjct: 324 ELELKLKDPQLATRLYQLVRGLYQEAINT-RIDIKSMGSNKNFRGKSVNSVKDLIDWLPV 382 Query: 270 YAARAAEKLRSEH-------QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS--- 319 + ++L + + ++ + + A S + Sbjct: 383 FVGDLIQRLTELDEEQPNCIRRPKTVAVHLWSWNGA-------YSKQCTVPKFMDLFKLK 435 Query: 320 RDIINAATRS-------LDAIWQAGHRYQKAGVMLGDFFS-QGVAQLNLFDDNAPRPGSE 371 I + A D + + + L F ++ F ++ R E Sbjct: 436 EVISHEAEHLIKTFASTFDNSPVSLFPLRSFSLNLTSFEVISSKESIDKFVSSSKRNREE 495 Query: 372 QLM 374 + Sbjct: 496 HID 498 >UniRef50_C3KFQ7 Putative ultraviolet light resistance protein B n=2 Tax=Pseudomonas RepID=C3KFQ7_PSEFL Length = 179 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 2/131 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +F+L D N FY SCE +FRP+L GKPVVVLSN+DGC++A EAK LG+KMGDP+FK + Sbjct: 9 VFSLVDANKFYCSCERIFRPELRGKPVVVLSNSDGCIVACTNEAKELGLKMGDPYFKIRA 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 R GV FSSNY LY ++S+R+ L VE YSID+A + + R Sbjct: 69 FLERNGVAAFSSNYTLYGELSHRMAMATASLVSAVEQYSIDDALGYVLSLNLYRRQLTVA 128 Query: 121 REIRATVLQRT 131 + RA + Sbjct: 129 Q--RALIAAEL 137 >UniRef50_Q9GNC0 DNA polymerase eta n=10 Tax=Drosophila RepID=Q9GNC0_DROME Length = 885 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 14/163 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + L D++ F+ E P+ +P+ V+ N G +IA N A+A GV + Sbjct: 17 VVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQYNPWRGGGIIAVNYAARAKGVTRHMRGDE 76 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 KDL + ++ Y D V + L+ + +E S+DEA+ D+T N Sbjct: 77 AKDLCPEIVLCQVPNIREKADTSKYRDAGKEVANVLQRFTQLLERASVDEAYLDITETVN 136 Query: 113 CR----DLTDFGREIRATVLQ-RTHLTVGVGIAQTKTLAKLAN 150 R F + + V +G K + AN Sbjct: 137 HRMQQMQSGAFALQPQELVNTFAVGYP-SIGDYVNKITNRFAN 178 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 33/273 (12%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+RA V + T GIA K LAKLA K ++ + L L + Sbjct: 211 VAGEVRAAVKKETGYECSAGIAHNKILAKLAAGMNKPNKQ------TILPLTETASLFDS 264 Query: 179 LPVDDVWGIGRRISK-KLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 LPV + G+G + + + +GIK + + +++ F+ RG Sbjct: 265 LPVGKIKGLGGKFGEVVCETLGIKFMGQVVKFSEVDLQRKFDEKNGTWLFNISRGIDLEA 324 Query: 237 LEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEKLRSE----HQYCRFIST 290 + + I C + F R IT +++ + ++ ++L + ++ + + Sbjct: 325 VTP-RFYSKSIGCCKKFPGRNNITGLKTLQHWLGELSSEINDRLEKDFIENNRRAKHMVV 383 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA----IWQAGHR------Y 340 ++ +S S L D I+ + + A + G Sbjct: 384 QYVQD---IDGEEVASSRSTALRDY--DQESIVRLSLDLIKANTKTFLRPGSESALNNAI 438 Query: 341 QKAGVMLGDFFSQGVAQ---LNLFDDNAPRPGS 370 + G+ +G F + Q +F + A + Sbjct: 439 KFLGISVGKFETVSSGQNKLQEMFANQAAKKRR 471 >UniRef50_Q6CYA8 KLLA0A01848p n=1 Tax=Kluyveromyces lactis RepID=Q6CYA8_KLULA Length = 645 Score = 127 bits (321), Expect = 6e-28, Method: Composition-based stats. Identities = 76/500 (15%), Positives = 141/500 (28%), Gaps = 152/500 (30%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A DVNAF+A E V PVV + ++A + A+ V + Sbjct: 26 IAHIDVNAFFAQVEQVRCGFSRDDPVVAV--QWTSILAVSYAARKYNVSRMESILDAIKK 83 Query: 62 F----RRCGVVCF------------------------SSNY----ELYADMSNRVMSTLE 89 V +NY E Y S +++ + Sbjct: 84 CDKIIPIHTAVFRKGEDYWQYHDGCGSWVEDESKKLSPTNYKVALEPYRRESRKLIKLFQ 143 Query: 90 ELSPRVEIYSIDEA--------------------FCDLTGVRNC--RDLTD--------- 118 + VE S+DEA F D+ G+ DL D Sbjct: 144 DEYDLVEKASVDEAFIELGRKLFYELLMDDSYTDFADIRGIFQDGRYDLNDHLPSLPTKL 203 Query: 119 --------------------------FGRE----IRATVLQRTHLTVGVGIAQTKTLAKL 148 IR + T GI+ TK L+KL Sbjct: 204 SIQFSGEVFNSQNRPLFEDWDDVLMCLASNSTNTIRNQIDDMLGYTTSCGISMTKNLSKL 263 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLM--SALPVDDVWGIGRRISKKL-------DAMG 199 A++ K + + + ++ W +G K+L Sbjct: 264 ASNYKKPNAQ------TIVKNNCIDDFLDCGKFEINSFWTLGGIRGKELIDLMELPKEHS 317 Query: 200 IKTVLDLADTDIRFIRKHF----------------------NVVLERTVRELRGEPCLQL 237 IK + D IRK + + + +RG+ L + Sbjct: 318 IKFIRDSWPVSSDDIRKFMLKKIICRDIQRSREYNINEADVAKISAKIYQLVRGQFRLPV 377 Query: 238 EEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKLRSEHQ------YCRFIST 290 E P + ++ ++ + + + + + ++ Q R I Sbjct: 378 EP-RPLPKSMMSKKNLRNDDCASVIDCIEWLEIFCSELNYRVHDLEQEYEKVIMPRTIVI 436 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG------HRYQKAG 344 IK Y + + + + SR++ AT+ ++ I + + ++ Sbjct: 437 MIK----GKAGMKYTQTRRITTASSSITSRELFINATKLINEIDKQHGKLAGVYPLRELS 492 Query: 345 VMLGDF--FSQGVAQLNLFD 362 + L +F +G L++F Sbjct: 493 LTLSNFDIIDKGKTVLDMFG 512 >UniRef50_C7CNB5 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CNB5_METED Length = 455 Score = 125 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 70/170 (41%), Positives = 103/170 (60%), Gaps = 2/170 (1%) Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + R+ D R + TV R + V VGI+ TKTLAK+AN AKK +GGV L + Sbjct: 35 QAWRECGDLLRR-QRTVSGRCEIPVCVGISTTKTLAKVANRTAKKD-PLSGGVCYLPDEA 92 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 Q ++ + + DVWGIGR ++ L A+ I + L L D + IR+ FNVVL+RTV EL+ Sbjct: 93 SQTAALAKMELGDVWGIGRGLAPPLAALSITSPLKLRDANPTRIRERFNVVLQRTVMELQ 152 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 G PCL LE+ +P + I CSRSF + + + +A+ +Y + AA+K+R+ Sbjct: 153 GTPCLDLEQDSPDSKTICCSRSFARAVEGFDELAEALTAYTSYAAQKMRA 202 >UniRef50_A4RD58 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4RD58_MAGGR Length = 617 Score = 124 bits (313), Expect = 5e-27, Method: Composition-based stats. Identities = 65/475 (13%), Positives = 128/475 (26%), Gaps = 135/475 (28%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + + E P L PV + + N A+ GVK + +D Sbjct: 56 IILH------FV-VENKE-PSLKSLPVGI--KQKSILATCNYVARRRGVKKLMRISEARD 105 Query: 61 LFRRCGVVCFSS-NYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNC---- 113 + +V + + D S + L S R E +DE F D++ + + Sbjct: 106 ICP--DLVLVDGEDLTPFRDTSKILYRVLRSFSWNDRAERLGLDEVFLDVSDMVSYNLDL 163 Query: 114 -----------------------RDLTDFG-----------------------REIRATV 127 D T F +R + Sbjct: 164 LNPHGLANSFFCLSSTDPELGFAFDATGFAGCVVAPSWSSNSSRGVVESDEASGLLRKRL 223 Query: 128 LQRTHL-------------TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 L +HL T GI+ K LAK+ K + T + + Sbjct: 224 LLASHLAYRIRLRIEQEGYTSACGISVNKLLAKMVGSRNKPRNQTT---LLALSKADTLS 280 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKT-------VLDLA---DTDIRFIRKHFNV---- 220 + + + GIG ++ ++ T + D + K Sbjct: 281 FVDQHSLRSLPGIGGSMAAVMEQHTRSTAPDKPLKAGQVRLQHDVSPHLLEKLLQPLGLE 340 Query: 221 --VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG-ERITDYPSMRQAICSYAARAAEK 277 + ++T R L G +++ +I ++ +++ + Q + +A + Sbjct: 341 KGIGQKTYRLLHGIDTAEVKFACDFPIQIGIEDTYANTGLSNIAQITQQLIKLSASLIRR 400 Query: 278 LR------SEHQYC----------RFISTFIK-TSPFALNEPYY---GNSASVKLL---- 313 +R + + R + + P P Y S S L Sbjct: 401 IRVDLTEPASNIDGPEAVVWVARPRTLRLTTRQRHPTTGPRPPYNSNRTSRSQPLPSFVH 460 Query: 314 -TPTQDSRDII-----NAATRSLDAIWQA-------GHRYQKAGVMLGDFFSQGV 355 +PTQ + D+ + G+ + + + G Sbjct: 461 SSPTQPAEDLAARLVEETLLPMFHKLNPPPTGTGPAGYNIGLINICVTGMVASGA 515 >UniRef50_C7X3F8 UvrA n=3 Tax=Enterococcus faecalis RepID=C7X3F8_ENTFA Length = 158 Score = 124 bits (311), Expect = 9e-27, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 50/142 (35%) Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 + + + A +LR +S F+ S ++ + P+ +++ + Sbjct: 2 VLKELSDQVASRLRMASCQTTCVSLFVGYSKGQTDKYGQTGWRRQMKVEPSNNTKVLTEH 61 Query: 326 ATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEG 385 R + + G + GV G QL+LF + + ++D + K G Sbjct: 62 VLRLFEENYAPGVDVRNLGVSYGRLVWNKNLQLDLFSVPEEQIHETDMYFLIDKIRQKFG 121 Query: 386 RGTLYFAGQGIQQQWQMKRAML 407 L A ++ + RA L Sbjct: 122 FKALIHASSLMEGATAISRASL 143 >UniRef50_Q56YN7 Putative uncharacterized protein At1g49980 n=1 Tax=Arabidopsis thaliana RepID=Q56YN7_ARATH Length = 402 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 69/183 (37%), Gaps = 13/183 (7%) Query: 173 RKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNVVLERTVREL-R 230 +S LPV + GIG+ L A+GIKT ++ + F+ + Sbjct: 1 MTFVSFLPVRKIGGIGKVTEHILKDALGIKTCEEMVQKG-SLLYALFSQSSADFFLSVGL 59 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G +++ I R+F D + + A + ++ E R ++ Sbjct: 60 GLGGTN-TPQVRSRKSISSERTFA-ATGDERLLYSKLDELAEMLSHDMKKEGLTARTLTL 117 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 +KT+ F + S +V L T S DI+ AT+ L A + + G+ + F Sbjct: 118 KLKTASFEI------RSRAVSLQRYTCSSDDILKHATKLLKA--ELPVSVRLIGLRMSQF 169 Query: 351 FSQ 353 + Sbjct: 170 VEE 172 >UniRef50_A7VU61 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU61_9CLOT Length = 150 Score = 122 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 7/138 (5%) Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 M+ + A A +LR + R I ++ + + + LL+ T + +I Sbjct: 1 MKMILYVLADSVARRLREQGLKGRTIHISVRDN------SLFSFTRQKTLLSYTNLTGEI 54 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-VAQLNLFDDNAPRPGSEQLMTVMDTLN 381 A ++ + G+ + D + +Q LF D R E+L +D L Sbjct: 55 AREALSLFREHYRWKRPVRSIGISVSDLAADTICSQTGLFCDEVKREKMERLDKALDRLK 114 Query: 382 AKEGRGTLYFAGQGIQQQ 399 + G + A ++ Sbjct: 115 VRFGTFAVQPAVLLKDRK 132 >UniRef50_UPI0000D878BE hypothetical protein CIMG_06713 n=1 Tax=Coccidioides immitis RS RepID=UPI0000D878BE Length = 1404 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 64/445 (14%), Positives = 134/445 (30%), Gaps = 96/445 (21%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CE V +P+ V +IA N A+ + + K Sbjct: 55 VVAHIDLDAFYAQCEMVRLNTPRTQPLAV--QQWESLIAVNYAARPFNISRMITAKEAKA 112 Query: 61 LFRRCGVVCF------------------------SSNYELYADMSNRVMSTL-------- 88 + V + + Y S +++ T+ Sbjct: 113 RCPQLMTVHVATFREGEGGKWAYREDGDHNVATDKVSLDPYRAESRKILGTIKDGLVAWA 172 Query: 89 EELSP-------------------------RVEIYSIDEAFCDLTGVRNCRDLTDFGREI 123 E++ P R+E IDE F DL+ + L + Sbjct: 173 EKVDPCGLGERRTESGGSVKEKEKDWTNMVRIEKAGIDEVFIDLSALVWATLLERYPMLQ 232 Query: 124 RATVLQRTHLTVGVGIAQTKTLAK---LANHAAKKWQ--RQTGGVVDLSNLERQRKLM-- 176 V + ++ L + A K+ + G + + + +M Sbjct: 233 EMEVKREM----------SERLPRPPTTALDWGKEDELVDLDEGETEEDDPDWDDVVMLV 282 Query: 177 -SALPVDDVWG-IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEP 233 + + V + G +G++I+ + + +L + + + +RG Sbjct: 283 GADI-VRMLGGKLGKQIASTFETEQVD---ELLRVPLEQFKAKLDDDTGMWLYELIRGND 338 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 ++ + +I ++SF I + + +AA +L E + + Sbjct: 339 WSEVNP-RTQIKSMISTKSFRPGINSLEQAEKWLRIFAAEIYGRLVEEGV----LEHKRR 393 Query: 294 TSPFALNEPYYGNSASVKLLTPTQ---DSRDIINAATRSLDAIWQAGH--RYQKAGVMLG 348 ++ + G++ S ++ PT D + A L + GH + + Sbjct: 394 PKVLTIHHRHSGHTKSRQVPIPTGMAIDEEPLFALAKDLLKQVTNEGHMWPCMNLALTVS 453 Query: 349 DFFSQGVAQLNL---FDDNAPRPGS 370 F +L F Sbjct: 454 GFEDGVSGNQSLDSFFTRATDTERK 478 >UniRef50_D1R480 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R480_9CHLA Length = 104 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AF+AS E + P L GKPV+V + G V + EA+A GV F+ Sbjct: 5 IIFHIDMDAFFASIEILRNPSLKGKPVIVGGSPDKRGVVSTCSYEARAYGVHSAMSLFEA 64 Query: 59 KDLFR 63 K Sbjct: 65 KKKMP 69 >UniRef50_C5DLU3 KLTH0G03586p n=2 Tax=Saccharomycetaceae RepID=C5DLU3_LACTC Length = 621 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 69/508 (13%), Positives = 140/508 (27%), Gaps = 153/508 (30%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A DVNAF+A E + PVV + +IA + AK G+ D F Sbjct: 26 VAHIDVNAFFAQVEQIRCQYSRDDPVVCV--QWNSIIAVSYAAKKFGISRMDTVFDAFKK 83 Query: 62 F----RRCGVVC-----------------------FSSNYEL-----YADMSNRVMSTLE 89 V S Y S +++ Sbjct: 84 CEGLMPVHTAVFKKGEDFWQYHDDCGSWHTDESKKLSPELHKVSLDPYRRESRKILKIFS 143 Query: 90 ELSPRVEIYS-----------------IDEA--------------------FC-----DL 107 E VE S IDE+ + D+ Sbjct: 144 EWCDLVEKASVDEVFLDLGRNVFSLLLIDESQKGFESIRTQFREGSYDLDDYLPGVPKDV 203 Query: 108 --------------TGVRNCRDL-----TDFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 T + D+ + ++IR + + T GIA+TKT+AKL Sbjct: 204 EINIEAGDYNPQKRTLYDDWDDVLFCLGSTITKKIRDQIEEVLGYTTSCGIARTKTVAKL 263 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLM--SALPVDDVW---GI-GRRISKKL---DAMG 199 A++ K + + + +L + W GI G+ +++ L Sbjct: 264 ASNFKKPNAQ------TIVRNCNIEDFLDNESLELTSFWSMGGIFGKEVTQLLDLPSERS 317 Query: 200 IKTVLDLADTDIRFIRKHF---------NV-------------VLERTVRELRGEPCLQL 237 +K + D + H + ++ + RG Sbjct: 318 LKYIRDSWPVSSWELGAHMREKIRKLNSGKEKLYSLDDAQVQQMADKIFQLARG-DFKMP 376 Query: 238 EEFAPTKQEIICSRSFGER-ITDYPSMRQAICSYAARAAEKLRSEHQ------YCRFIST 290 P + ++ +++ Y + ++ +++ Q + I+ Sbjct: 377 FNPRPVIKSMMSNKNLPGNSCKHYVDCLAWLEVFSGDLIGRIKELEQEYERIIVPKTITV 436 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW------QAGHRYQKAG 344 KT + + + ++ S+D++ T+ + + + Sbjct: 437 MTKTRNYERHTRRTTLTVGGQVK-----SKDLMEFGTKLIRELESLYGGSDTYYPLTGIA 491 Query: 345 VMLGDF-FSQGVAQL-NLFDDNAPRPGS 370 + L +F + + ++F Sbjct: 492 MSLSNFEIHETGRTIVDMFGRQTQVVRK 519 >UniRef50_A1VVG9 DNA-directed DNA polymerase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VVG9_POLNA Length = 150 Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 4/133 (3%) Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + T+PF ++ Y S +V L PT DSR I+ AA L I++ G Y KAGVML Sbjct: 17 VHTNPFRQHDTQYSRSLTVPLRWPTSDSRLIVQAALHGLQQIYRPGLNYAKAGVMLLGLQ 76 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG---IQQQWQMKRAMLS 408 AQ L P E LM MD +N + G GT+ A G + W M++A+ + Sbjct: 77 HGPAAQHEL-ALGDDAPRLEALMAAMDRINERHGPGTVALASAGHFAENRIWSMRQALKT 135 Query: 409 PRYTTRSSDLLRV 421 P Y R SD+ Sbjct: 136 PDYMARWSDIPTA 148 >UniRef50_B4VGM9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B4VGM9_9ACTO Length = 380 Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats. Identities = 45/198 (22%), Positives = 73/198 (36%), Gaps = 9/198 (4%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGI 139 V+ L E SP V+ A + G + D IR + R V +G+ Sbjct: 20 RAVLELLREFSPLVQALPPRAALVQVRGAQRYFGVDPERIAEVIRLRAVARLGTDVRIGV 79 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A T +A +A+ GGV+ + ER + + LPV++++G+G R ++ L G Sbjct: 80 AGTWAVAAMASARI----PGPGGVLAV-PGERVAEFLGPLPVEELYGLGSRQAEALRGYG 134 Query: 200 IKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 + TV L + + + R V RG + + SR F Sbjct: 135 LHTVGALTEVPPGVVERILGRRAGRVVVERARGIDPRPVTPRDLPSSAAVRSR-FAREEL 193 Query: 259 DYPSMRQAICSYAARAAE 276 D P R + R Sbjct: 194 DGPHARAELLGLVVRLGA 211 >UniRef50_Q015X2 DNA polymerase iota/DNA damage inducible protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q015X2_OSTTA Length = 492 Score = 117 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 66/448 (14%), Positives = 122/448 (27%), Gaps = 115/448 (25%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+A E + L G P+ V G ++ A+ALG K D + L Sbjct: 23 VLHVDADAFFAQVEALRDERLRGIPIAV--RQHGDIVCVCHRARALGAKKHDDVDACRTL 80 Query: 62 FRRCGVVCFSSN--------YELYADMSNRVMSTLEELSPRV----------EIYSIDEA 103 G N YE Y MS + + L R+ E SIDEA Sbjct: 81 LENNGGKVIHVNTTAEHLVSYEPYTRMSYELHAKLHAACERLRLDGKGIVIYEKASIDEA 140 Query: 104 FCDLTGVRNCRDLTDFGREIRATV---LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 + + +C+ R + QR V VG+A+ K LA+ Sbjct: 141 YVQIEHGSSCQSA---ARRSPSRFDGRFQRVRTRVSVGVARNKLLAR----------SLP 187 Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN- 219 +L KL G+ T ++ + + + Sbjct: 188 HCKGELVRP------------------------KLTKHGLHTAWNVRSMNAKRLESLIGL 223 Query: 220 --VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT------------------- 258 + G ++ + K + + + Sbjct: 224 APKPALELCKAAHGVDDAEVIQRVNEKSSLSTQMTLTIKPRPMPRNVGGEVGVTGGPAGM 283 Query: 259 -------DYPSMRQAICSYAARAAEKLRSEHQYCR----FISTFIKTSPFALNEPYYGNS 307 ++ + + + EK++ Y + + IK ++ + Sbjct: 284 FNPLTCGEHDRIALTMTALTRELCEKIKVHELYTKRWPITMGVKIK-----IHGTSVQYN 338 Query: 308 ASVKLLTPTQDSRD------IINAATRS--LDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 S ++ + + AT L + Q V +F S Sbjct: 339 RSAAFPVKFDNAMEENVPITMAKKATELAVLAVGQRKTEIIQHITVSASNFKSSTGE--- 395 Query: 360 LFDDNAPRP----GSEQLMTVMDTLNAK 383 + ++ L + +N K Sbjct: 396 --KEKTRDEIISAETDPLKKAISRMNEK 421 >UniRef50_Q14N03 Putative dna polymerase iv c-terminal truncated protein n=1 Tax=Spiroplasma citri RepID=Q14N03_SPICI Length = 90 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 3/87 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-GCVIARNAEAKALGVKMGDPWFKQK 59 + D+N+F+ASC V P L GKP+VV +++ V N EA+ LG+ P +K K Sbjct: 3 VIFHIDMNSFFASCHQVANPHLQGKPLVVANSSRQAVVTTANYEARQLGINSPMPLYKAK 62 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMS 86 ++ + ++ LY D + ++ + Sbjct: 63 EIC--HHLEIVKQDFGLYVDFAQKLFN 87 >UniRef50_Q4HDP3 Putative uncharacterized protein n=1 Tax=Campylobacter coli RM2228 RepID=Q4HDP3_CAMCO Length = 269 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 71/228 (31%), Gaps = 27/228 (11%) Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI---RFIRKHFNV 220 L + +RKL P++D W IG+ + KL ++GI + DLA + + + F V Sbjct: 43 WYLDEMLYRRKLWQHTPINDFWRIGKGYATKLKSIGINNMGDLARYSLNNKDKLYQIFGV 102 Query: 221 VLERTVRELRGEPCLQLEEFAP-TKQEIIC--SRSFGERITDYPSMRQAICSYAARAAEK 277 E + G ++ + I ++ E + R + + Sbjct: 103 NAELLIDHAWGFESCTMQAIKEYKSKHISKVMAKVLPEP-YSFKKARDMLKEIVDHMVLE 161 Query: 278 LRSEHQYCRFISTFIKTSP--------FALNEPYYGNSAS--------VKLLTPTQDSRD 321 L ++ C I ++ + S + L T Sbjct: 162 LIEQNLTCNQIVLDVQYDKESLEKVQSYNGPMSKDSYGRSIPKNAHSTINLDYHTSSLEA 221 Query: 322 IINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA----QLNLFDDNA 365 I N D I A +K + L + + +LF D Sbjct: 222 ICNKGLELFDLIVNADFLIRKISLTLNNVVKNDTIKKIKEPSLFTDLE 269 >UniRef50_C8Q3E7 Damage inducible protein P (DNA polymerase IV) (Fragment) n=4 Tax=Enterobacteriaceae RepID=C8Q3E7_9ENTR Length = 167 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 62/176 (35%), Gaps = 14/176 (7%) Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 G+ +KKL+ MG+ T D+ TD+ + K F G + ++ + Sbjct: 1 GKVSAKKLEEMGLLTCGDVQQTDLARLLKRFGKFGRVLWERSHGVDERGVV-VERERKSL 59 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKL---RSEHQYCRFISTFIKTSPFALNEPYY 304 R+ E I + + I +L R + R +K + F L + Sbjct: 60 GVERTLMEDIHSWEQCLEIIDYLYEELERRLTRIRPDKLIARQ-GVKLKFNDFQLTTQEH 118 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P + D+I A ++ D +AG + G+ + Q QL L Sbjct: 119 IW--------PVLNKEDMIAVARKTWDE-RRAGRGVRLVGLHVTLVNPQLERQLLL 165 >UniRef50_B4DB63 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB63_9BACT Length = 501 Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats. Identities = 61/372 (16%), Positives = 111/372 (29%), Gaps = 36/372 (9%) Query: 10 FYASCETVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 F F + W +PV + G V+ A GV G + + Sbjct: 12 FSLQAALRFHEEAWRQPVAITDGDTEKGRVLETTIPAAHSGVWPGMVVTQALARCPSLRL 71 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATV 127 + S E +S ++ T LSP +E + DL ++ C D + R + Sbjct: 72 LQRSRTQE--EVVSALLLETTGTLSPLIEATAEGLCVADLRQMKAC-DWEPWARGVVER- 127 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI 187 L V VG+A LA LA A+ + + + ++ VD G Sbjct: 128 FATRQLRVQVGLAANPDLAILAARHAEPA-------LVVQHAGAFLAGVAVTAVDAAPG- 179 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 + + L GI ++ +LA + + + G +L P Sbjct: 180 ---LLEILRDWGIGSLGELARLPRSELIERLGPEAGALWEQAAGRAHRELRLVRPP---- 232 Query: 248 ICSR-----SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF--ALN 300 F I + + + +L ++ ++ I P + Sbjct: 233 --EVFWEAFEFEHPIETTEPLLFILRRQLEQLMLRLEEAYRVAAQMTLTIPLEPGPSNVT 290 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QGVAQL 358 + + +PT D+ + L+ + GV L +Q Sbjct: 291 AGTDRYERTFTIPSPTTDTEVLFRILHTHLENLRLEQQP---IGVRL-RVEPVVANRSQF 346 Query: 359 NLFDDNAPRPGS 370 LF+ P Sbjct: 347 QLFESPLRDPNR 358 >UniRef50_A7F1S2 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7F1S2_SCLS1 Length = 465 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 89/304 (29%), Gaps = 94/304 (30%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D +AFYA CE V +P+ V +IA N A+ G G + + Sbjct: 37 VIALVDYDAFYAQCEMVRLKLDASQPLAV--QQWNAIIALNYAARGFGFSRGASVEEVRR 94 Query: 61 LFRRCGVVCF-------------------------SSNYELYADMSNRVMSTLEELSP-- 93 L + + + Y S + ++ + + P Sbjct: 95 LCPNIIMQHVATWREGETSWAYRSDAADPAMMKKDKAALDPYRIESRKSINIITKHLPPA 154 Query: 94 ---RVEIYSIDEAFCDL------------------------------------------- 107 R+E S+DE F DL Sbjct: 155 PLQRIEKASVDEVFIDLSAHVHSVLVSRYPQLAVDDNVHGSLPLPPRDIVLHWETDNLVD 214 Query: 108 ----TGVRNCRDLTDFG--------REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 T + D + R +R + + H T GIAQ K LAKL K Sbjct: 215 LPTSTDDTHRIDWDEIALNIGAQIVRNLRKEIFESLHYTCSAGIAQNKALAKLGAGFKKP 274 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFI 214 Q+ + +S + + G+ + K +A G ++ DL + I Sbjct: 275 DQQ------TVIRARAVPFFLSTCKMTSIRGLAGVLGVKAKEAFGSNSIPDLLAIPQKEI 328 Query: 215 RKHF 218 Sbjct: 329 VAAL 332 >UniRef50_A8LY61 UMUC domain protein DNA-repair protein n=24 Tax=Actinomycetales RepID=A8LY61_SALAI Length = 528 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 61/406 (15%), Positives = 116/406 (28%), Gaps = 52/406 (12%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 S + PV VL N V+A + +A+A GV+ G + + + + + Sbjct: 16 VSAAELVDGVPATDPVAVLHANR--VVACSEQARAKGVRRGLRRREAQSRCPQ--LTVVA 71 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDFGREIRATVLQR 130 + V++ +EEL V + G R+ I V Q Sbjct: 72 HDPARDTRAFEPVVAAVEELVAGVAVVRPGVCAIPARGPARHLGGEEAAAERIIEQVAQA 131 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR- 189 + VGIA A LA + ++ PV+ + GR Sbjct: 132 CAVESQVGIADGAFAAGLAARTG-----------QAVPPGGTPRFLADQPVEAL---GRP 177 Query: 190 RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL-EEFAPTKQEII 248 ++ L +G++T+ D A + F + G L P + Sbjct: 178 ALADLLRRLGVRTLGDFAALPSGDVLARFGADGALAHQLAAGRDHRPLAVRQPPADLTVT 237 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 + E + + + A R ++L + C + T+ + + Sbjct: 238 VDQ--DEPLDRVDAAAFVARALAERLHDRLTAYGLACTRLGIEAVTAHGQELHRTWRHDG 295 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGH-------------RYQKA--GVMLGDFFSQ 353 + + I + LD G R + GV+ Sbjct: 296 LLT-------AAAIADRTRWQLDGWLSGGRSGTESARPTAGIVRLRLVPDGVVASG---- 344 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 Q L+ ++ + + G + A G + Sbjct: 345 -ALQPGLWG--EAGEERDRAHRALSRIQGVLGPEAVVTAVLGGGRS 387 >UniRef50_B9BQL7 UmuC protein n=2 Tax=Burkholderia multivorans RepID=B9BQL7_9BURK Length = 133 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 2/110 (1%) Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 PT D+ ++ AA L I++ G +Y KA ML + +QGV Q +LF A ++ Sbjct: 26 TVPTSDTLRLVAAALYGLKRIYKPGFKYAKARFMLTELQAQGVEQGDLFAPEA--SKRDR 83 Query: 373 LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 LM +D +N + GR TL Q W M + +P YTT DL + Sbjct: 84 LMAELDAVNDRFGRNTLRVGNVEGHQAWHMAQNAKTPSYTTDWGDLPVAR 133 >UniRef50_C2FQ53 UvrA family protein n=1 Tax=Lactobacillus plantarum subsp. plantarum ATCC 14917 RepID=C2FQ53_LACPL Length = 184 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 25/177 (14%) Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 GR I+ T+ + L VGI ++ K+ Sbjct: 10 GRLIQNTISHQLSLYTTVGIG------------------------EIHYETVPDKIWPIT 45 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL-E 238 + D+WGIG R++K L+ + I + +L T+ F++++ V+ + G QL E Sbjct: 46 ELTDIWGIGPRMAKHLNRLQIHNMYELVHTNPHFLKQNLGVISSQIFATSWGVDHSQLTE 105 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + S+ + I + A +LR H+ +S I S Sbjct: 106 PIKTKEASLGNSQVLPRDYLAQGELETVIKEIDEQVAARLRHHHKLAGCLSLSIGFS 162 >UniRef50_B5BUV4 DNA polymerase eta n=4 Tax=Agaricales RepID=B5BUV4_COPCI Length = 641 Score = 110 bits (277), Expect = 8e-23, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 86/270 (31%), Gaps = 26/270 (9%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + R VL++ + G+A+ K LAKLA K + + ++ Sbjct: 266 AAGMVMKARKGVLEQLGYSTSAGLARNKFLAKLAASYRKPFGQ------NILRNAAIPNY 319 Query: 176 MSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 + + + +G ++ + L TV DL + ++ F LRG Sbjct: 320 LIPMAFQKIRFLGGKLGRALAQEYDAATVGDLLSISLDEMQNKFGEDSIWVYEILRGIDR 379 Query: 235 LQLEEFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE-----HQYCRFI 288 ++++ T + ++ S++ + IT I AA A +L + + + I Sbjct: 380 SEVKDKGTTLTKSMLASKNLPKPITAASEGYHWIRVLAAELALRLNEARQISPNLWPKNI 439 Query: 289 STFIK--TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI--WQAGHRYQKAG 344 + + + + V + + A + + + Sbjct: 440 VLHARKGYESSRSKQAVFPFTREVTV-------DTVAAAGDKLWKELVGNATTMKISSVQ 492 Query: 345 VMLGDFFSQGVAQLNL--FDDNAPRPGSEQ 372 + Q ++ F + P ++ Sbjct: 493 LSFTGIDVSEPGQQSIEGFFKSKPPSKRQR 522 Score = 92.1 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 49/131 (37%), Gaps = 25/131 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + LCD +AFYA+CE V P+VVL +IA N A+ G+ D Sbjct: 46 VVGLCDSDAFYAACEMVRLGVDKDTPLVVL--QWDSLIAVNYPARKYGISRMDKKKDALK 103 Query: 61 LFRRCGVVCF---------------------SSNYELYADMSNRVMSTLEELSP--RVEI 97 VV + + Y S ++ + EL P VE Sbjct: 104 RCPHLKVVHVATYKEGEKEPGYWDNVDTNTHKVSLDYYRRESMKIAALFRELLPGCEVEK 163 Query: 98 YSIDEAFCDLT 108 SIDEAF D T Sbjct: 164 ASIDEAFIDFT 174 >UniRef50_B5I0P9 Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I0P9_9ACTO Length = 291 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 9/151 (5%) Query: 91 LSPRVEIYSIDEAFCDLTGVRNC--RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 +P VE D A DL G RD + IR L + +G LA++ Sbjct: 139 FTPVVEALPPDRALADLRGAERYFKRDAVELASVIRVRALALHGVDCAIGAGPGPMLARM 198 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLAD 208 A A+ GV + ++ PV + G+G ++ L G+ T+ +A Sbjct: 199 ALKDARP------GVTRSVPGDAAADFLAGRPVAALPGVGAATARTLCEYGLDTLGRVAA 252 Query: 209 TDIRFIRKHFN-VVLERTVRELRGEPCLQLE 238 + +++ + G ++ Sbjct: 253 APLSTLQRLVGAKAGRELHEKANGVDRGRVV 283 >UniRef50_Q75EE5 AAR136Wp n=1 Tax=Eremothecium gossypii RepID=Q75EE5_ASHGO Length = 617 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 70/469 (14%), Positives = 125/469 (26%), Gaps = 154/469 (32%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A DVNAF+A E V PVV + VIA + + G+ D + Sbjct: 26 VAHIDVNAFFAQVEQVRCGYGKDDPVVCV--QWSSVIAVSYACRKYGITRLDSVAEAMKK 83 Query: 62 FR--------------------------------RCGVVCFSSNYELYADMSNRVMSTLE 89 + + Y S +++ ++ Sbjct: 84 CPTLIPIHTAVFKKGEDFWQYHDGYGPWNTDPSRQLDPAIHKVALDPYRRESRKLLKMIQ 143 Query: 90 ELSPRVE--------------------------------------IYSIDE--------- 102 + P VE YS+DE Sbjct: 144 KRCPIVEKASIDEVFVDLGPQCFAQLLLGDDGAEFQELRRLFVEGSYSLDEPLPPLPRSV 203 Query: 103 ----------------AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 +F D V C + +R V T G+++TK+++ Sbjct: 204 KLQFAGDVYGADAERTSFLDWDDVIMCLG-SRLALALRQEVEDALGYTTSCGVSRTKSVS 262 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSA----LPVDDVWGIGRRISKK-------- 194 KLA++ K + + + LP W +G I K+ Sbjct: 263 KLASNYRKPNAQ------TIVRNAAVETFLDQGGFELP--SFWTLGGAIGKELLDLLELP 314 Query: 195 -------LDAMGIKTVLDLADTDIRFIRKH---------------FNVVLERTVRELRGE 232 L A+ ++ L +R IR + + +RG Sbjct: 315 PAGSIPALRALCPESPEQLHACLLRRIRDRPLPHDAAPYLIDEQAAEALATKLFYLVRGT 374 Query: 233 PCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ------YCR 286 C+ + G + ++A A +L+ HQ R Sbjct: 375 HCVPVNPRPTVSSMTSRKNMRGNACKSLADCHPWLEVFSAELAGRLQDLHQEYDRIYLPR 434 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQD--SRDIINAATRSLDAI 333 ++ A + S S L PT + + ++ A R ++ + Sbjct: 435 TLTV------AAQGRAHQRVSRSTGLHAPTGNVTALTLLKAGARLVNEL 477 >UniRef50_C5IWL2 UV repair DNA polymerase n=21 Tax=Gammaproteobacteria RepID=C5IWL2_ECOLX Length = 102 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 49/76 (64%), Positives = 58/76 (76%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FYASCE +FRPDL PVVVLSNNDGCV+AR+ EAK LG+KMG P F+ K Sbjct: 16 VFALVDCNNFYASCEKLFRPDLKDTPVVVLSNNDGCVVARSREAKLLGIKMGVPVFQIKA 75 Query: 61 LFRRCGVVCFSSNYEL 76 +R G++ FSSNY L Sbjct: 76 EMQRHGILAFSSNYAL 91 >UniRef50_A7HW56 Nucleotidyltransferase/DNA polymerase n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HW56_PARL1 Length = 548 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 75/394 (19%), Positives = 127/394 (32%), Gaps = 42/394 (10%) Query: 15 ETVFRPDLW--GKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 RP L KP + G V ARN A A G++ G L + Sbjct: 40 ARRARP-LRVPEKPRALAMPGVGGLRVTARNELADAAGIRPGQMVSDATALCPGLELH-- 96 Query: 71 SSNYELYADMSNRVMSTLEELSP--RVEIYSI-DE---AFCDLTGVRNCRDLTD-FGREI 123 S++ E R+ +P ++ I DE D+TG + E+ Sbjct: 97 SADREGDRKGLVRLAGWCGRYTPWTALDPQGIGDEPDGILLDITGCDHLFGGEAKLLEEL 156 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 R LQ LT IA T+ A A ++ Q V+ + + + +LPV Sbjct: 157 RRR-LQGFGLTTRAAIASTRG----AAWALARFGNQPALVL---PVNGEVDALRSLPVAA 208 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 + + I L +G+K + DL + F + R + E G + P Sbjct: 209 LR-LNEAIVNGLMRLGLKKIGDLYGKPRAPVTARFGPEVSRRLDEALGFEPEPISPELPP 267 Query: 244 ---KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I +F E +T + A+ AA E L EHQ R + + F ++ Sbjct: 268 VFYRASI----TFSEGLTRNAHIEDAVKRIAADLCEVLEREHQGARRLELQL----FRVD 319 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFSQGVAQ 357 + D+ + L + + G + + AQ Sbjct: 320 GEVTRL--QAGTGIASHDAFHLSRLFREKLAQLGDDFDTGFGVEALTLSCLAVDELKPAQ 377 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 ++ L +D L+ + G + Sbjct: 378 ETF---ENESSRAQALEQFIDRLSNRFGADRVLR 408 >UniRef50_Q04049 DNA polymerase eta n=8 Tax=Saccharomycetaceae RepID=POLH_YEAST Length = 632 Score = 109 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 60/441 (13%), Positives = 115/441 (26%), Gaps = 149/441 (33%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D+NAF+A E + PVV + +IA + A+ G+ D + Sbjct: 26 IAHIDMNAFFAQVEQMRCGLSKEDPVVCV--QWNSIIAVSYAARKYGISRMDTIQEALKK 83 Query: 62 F----RRCGVVCFSS-NY---------------------------ELYADMSNRVMSTLE 89 V ++ E Y S + + + Sbjct: 84 CSNLIPIHTAVFKKGEDFWQYHDGCGSWVQDPAKQISVEDHKVSLEPYRRESRKALKIFK 143 Query: 90 ELSPRVEIYSIDEAFCD----------------LTGVRNCRDLTD--------------- 118 VE SIDE F D LTG +D Sbjct: 144 SACDLVERASIDEVFLDLGRICFNMLMFDNEYELTGDLKLKDALSNIREAFIGGNYDINS 203 Query: 119 ----FGREIR--------------------ATVLQRTHLTVGVGI--------------- 139 +I+ V+ V GI Sbjct: 204 HLPLIPEKIKSLKFEGDVFNPEGRDLITDWDDVILALGSQVCKGIRDSIKDILGYTTSCG 263 Query: 140 -AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM--SALPVDDVWGIGRRISKKL- 195 + TK + KLA++ K + + + + + W +G + K+L Sbjct: 264 LSSTKNVCKLASNYKKPDAQ------TIVKNDCLLDFLDCGKFEITSFWTLGGVLGKELI 317 Query: 196 ------DAMGIKTVLDLADTDIRFIRKHFNVV---------------------LERTVRE 228 IK + + + +++ + E+ + Sbjct: 318 DVLDLPHENSIKHIRETWPDNAGQLKEFLDAKVKQSDYDRSTSNIDPLKTADLAEKLFKL 377 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKLRSEH----- 282 RG L L P + ++ +++ G+ + + A +++ Sbjct: 378 SRGRYGLPLS-SRPVVKSMMSNKNLRGKSCNSIVDCISWLEVFCAELTSRIQDLEQEYNK 436 Query: 283 -QYCRFISTFIKTSPFALNEP 302 R +S +KT + + Sbjct: 437 IVIPRTVSISLKTKSYEVYRK 457 >UniRef50_A8B5P1 DNA damage repair protein n=2 Tax=Giardia intestinalis RepID=A8B5P1_GIALA Length = 867 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 126/390 (32%), Gaps = 80/390 (20%) Query: 18 FRPDLWGKPVVVL-------SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 R L G PV++ +N+ ++ AK +G++ G + + Sbjct: 277 ERTRLIGAPVIIANQFDSKEANDGAIILDCTKAAKQMGIESGMTVGEAFERCP--TTQVL 334 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-----RDLTDFGREIRA 125 S + ++Y + L + S + + +EA DL+G + G +++ Sbjct: 335 SYDTKMYNTKGQELFKVLGQFSKAIMPMNYNEAVLDLSGHVSLSAANGNSCLALGLQLQQ 394 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 VLQ T L +G + A++A A + R L+ P+ + Sbjct: 395 RVLQETGLHCSLGFGDSLFAAQIATKLAGSNGIFSATSSTC------RTLLINRPLSFLP 448 Query: 186 GIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCL------QL 237 G+ + ++ + +GI ++ I I + +V ++ + L+G + Sbjct: 449 GLSSEVEQQFAEQLGITKCGEILSAQIGDICQIISVDQAKQLISMLKGRTDDASKGFFPV 508 Query: 238 EEF---APTKQ---------------------------EIICSRSFGERITDYPS---MR 264 ++ I+ +R ++ + Sbjct: 509 RTEGLQPRARKLFLNTLESKQIHKKSTETLSSKALRRLSIL-TRPLPGQVHSLQDDISLD 567 Query: 265 QAICSYAARAAEKLRSEHQYCR-----FISTFIKTSPF-------ALNEPYYGNSASVKL 312 +++ ++ ++ I+ +K S N +Y +A+ +L Sbjct: 568 KSVSPLITELYLRMLRKNLSLTSETKLTITLQLKQSNPLANEIQNEPNTDHYSITATTEL 627 Query: 313 LTPTQDS------RDIINAATRSLDAIWQA 336 T + + +AA R + +W Sbjct: 628 FNVTVSTTPKPDYHILKSAAKRCVKDLWSQ 657 >UniRef50_B1ZZZ2 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZZ2_OPITP Length = 526 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 61/398 (15%), Positives = 122/398 (30%), Gaps = 60/398 (15%) Query: 11 YA--SCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCG 66 +A + + R +L G+PV +L ++A EA+A GV+ G + G Sbjct: 10 FALQAVLRLER-ELVGRPVGLLDETLRPPAIVACTPEARASGVEAGLTAAQAMARC--AG 66 Query: 67 VVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRAT 126 + ++N + +++ +SP VE + + G+ R + + Sbjct: 67 ITLRNANPAAETEARAALLAAAFSISPHVEDTAPGVGTMQVGGLAEERRVPALHAAVTQ- 125 Query: 127 VLQRTHLTVGVGIAQTKTLA---------------------------KLANHAAKKW--- 156 L L G+A T LA +LA + + Sbjct: 126 -LHGLGLVATAGLAATPLLALYAARFGQYHNSAARVGRGVSPSRELQRLAEDGS-PYLLG 183 Query: 157 --QRQTGGVVDLSNLERQRKLMSALPV---DDVWGIGRRISKKLDAMGIKTVLDLADTDI 211 + +R + LP+ + + ++ L GI+T+ +L Sbjct: 184 GSGLPLRNEIVHLAPGTERMFLRDLPLAVAEPLP----ETAEILAGWGIRTLGELTALTK 239 Query: 212 RFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYA 271 + + GE L APT++ + + + + + Sbjct: 240 ADVTQRLGPAGLALWERAAGEVTRPLRLIAPTQR-FAAELTLEHEVETLEPLLFVLRRFI 298 Query: 272 ARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 R A +LR+ ++ + S + + +L PT + L+ Sbjct: 299 DRLALELRNAGFVAGELTLTLSLSDETAH------ARDFRLPEPTAQEEILFRVLHTHLE 352 Query: 332 AIWQAGHRYQKAGVMLG-DFFSQGVAQLNLFDDNAPRP 368 + + G+ L Q LFD P Sbjct: 353 TL-HTAATVR--GLRLECRPVRPLTRQHGLFDSALRDP 387 >UniRef50_C5JEX9 Sister chromatid cohesion protein n=2 Tax=Ajellomyces dermatitidis RepID=C5JEX9_AJEDS Length = 757 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 82/230 (35%), Gaps = 26/230 (11%) Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D R +RAT+ +R T GIA+ K +AKL + K ++ + ++ + Sbjct: 320 DIVRSVRATIWERLKYTCSAGIARNKMMAKLGSACNKPNKQ------TIVRNRAVQQFLG 373 Query: 178 ALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCL 235 + +G ++ K++ A G V L + +R LRG Sbjct: 374 GFKFTQIRMLGGKLGKQVAAIFGTDEVGGLLHVPVEQLRLKLGDDTGTWLYELLRGYEYS 433 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH-----QYCRFIST 290 ++ + ++ ++SF I + + + A +L E + + I+ Sbjct: 434 EVS-VRTQIKSMLSTKSFRPGIQSSTQAEKWLRIFVADIYGRLLEEGVLENKRRPKVITI 492 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRD---IINAATRSLDAIWQAG 337 +T+ G + S ++ PT + + A L + G Sbjct: 493 HHRTA---------GQTRSRQIPIPTGRPITDTFLFDLAKTLLAQVVNEG 533 Score = 73.2 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 2/65 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CE V +P+ V +IA N A+A + + + Sbjct: 85 IIAHIDLDAFYAQCEMVRLNTPRTQPLAV--QQWESLIAVNYAARAFNITRMLTAAEARK 142 Query: 61 LFRRC 65 + Sbjct: 143 RCPQL 147 >UniRef50_A9VB80 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VB80_MONBE Length = 722 Score = 107 bits (269), Expect = 6e-22, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 8/136 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFY E P+L +P+ V +IA + + KA G+ + + Sbjct: 6 VIIHADLDAFYTQVERQRHPELKDRPLAV--QQWSGLIAIDYKCKAAGIGRHSTVEEARK 63 Query: 61 LFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + V ++ E Y S +M+ +E+ E SIDEA+ D+T R+ Sbjct: 64 ILPDLACVHVDVINQKASLEPYRQASRDIMAVMEQYG-TFERASIDEAYFDVTQEAQQRE 122 Query: 116 LTDFGREIRATVLQRT 131 ++ T Sbjct: 123 AQTPATQLCRHYADLT 138 Score = 78.2 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 69/215 (32%), Gaps = 34/215 (15%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EIR V + T GIA K AK+ + K Q+ + + Sbjct: 199 IAAEIRFRVFEETGYVCSAGIAHNKLFAKMGSGFNKPSQQTLYPRASSGDQQY------- 251 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQL 237 R+ ++L V D + +R F + LRG + Sbjct: 252 ----------RQAGERLL------VADCLGLSLAELRTEFSSETAAWLHGLLRGHDSRAV 295 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL----RSEHQYCRFISTFIK 293 P + ++ ++S + T + I + A ++ R +++ + K Sbjct: 296 ASKGPPR-SLLEAKSITGQATQLIVVEYWINNLCHGLARRILDDARRHNRWPKNYVLQFK 354 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 + Y+G S S + +RD++ A Sbjct: 355 R---RADRTYFGASRSCGPVPHI--TRDMVRHAQA 384 >UniRef50_C8XBY5 UMUC domain protein DNA-repair protein n=23 Tax=Actinomycetales RepID=C8XBY5_NAKMY Length = 510 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 92/301 (30%), Gaps = 25/301 (8%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 A+ RP PV VL N V A A A+A GV +G + ++ Sbjct: 16 AAARQANRP--ASDPVAVLHANR--VRACTAAARAQGVHVGQRRRDAQSRCP--DLLITG 69 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 + + A M V + +E L+P VE+ C G E ++ Sbjct: 70 VDQDRDARMFEPVAAAVESLAPGVEVLRCGVVACPARGPARYFGSEAAAAERIVDAVEAL 129 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV---WGIG 188 + +GIA +A LA H + L + LP+ D+ IG Sbjct: 130 DVECCIGIADDLEIAVLAAHRS-----------VLVPPGESAAFCAGLPITDLSRDPAIG 178 Query: 189 R----RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK 244 ++ L +GI T A + F R G P L + Sbjct: 179 PPDRVALTDLLIRLGITTAGAFAALPPEKVATRFGADGVCAHRLALGRPERGLSRRQIPE 238 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 ++ + + + A + A R +L C + T A + Sbjct: 239 D-LVVEQECDPPLDRVDTAAFAARALAERFHARLADAGLACTRLVITAATDRGATLSRTW 297 Query: 305 G 305 Sbjct: 298 R 298 >UniRef50_C1F5L8 Putative uncharacterized protein n=2 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5L8_ACIC5 Length = 508 Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats. Identities = 60/389 (15%), Positives = 117/389 (30%), Gaps = 38/389 (9%) Query: 16 TVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 RP L +P VV+ V + +A+ LG+ G + V S Sbjct: 22 LRLRPQLRNQPCVVMEGEPPLEQVCSLTRKARILGLLPGMTQVEVDTF--SGVTVLQRSR 79 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFC---DLTGVRNCRDL-TDFGREIRATVLQ 129 E S ++ SPRVE S +F D+ G + + + V Sbjct: 80 KEE-ITTSEALLECAGSFSPRVEEVSYRHSFVCVVDIAGTQELFGPPNKLAQNLLTRV-S 137 Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR 189 + VG++ A +A V + + ++ALP+ + + Sbjct: 138 ALGIAACVGVSSN-FHASIAVAR-----APLALSVRVIPPGEEGAALAALPLTVL-NLSE 190 Query: 190 RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 + ++ + GI+ + LA R + + + RGE P + Sbjct: 191 QQAETFSSWGIRNLGMLAALPERELISRLGQPGKHLRQLARGEAPHLFLPVEPEF--TLH 248 Query: 250 SRS-FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 R + ++ + + + ++ + E Sbjct: 249 ERMELDSPVAVLDALMFVANLMLEQLIVRATARVLALAAVTVAL------TLEGGASCLR 302 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ----GVAQLNLFDDN 364 +++ PT D I L+A A V+ ++ Q+ LF Sbjct: 303 TIRPALPTNDRPLWIKLLHLDLEAHPPQ------AAVLAIRLEAEPGSTSQVQMGLFSPQ 356 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 P P +L + + + G + A Sbjct: 357 LPEP--SRLDVTLARIRSIVGDENVGRAV 383 >UniRef50_A8GJ69 UV protection protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GJ69_SERP5 Length = 136 Score = 106 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 68/162 (41%), Positives = 92/162 (56%), Gaps = 30/162 (18%) Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 M QA+C Y AAEKLR E QYCR I+ F++TSPFA N+PYY NS SV+L+ TQD D+ Sbjct: 1 MHQAVCQYVEHAAEKLRGERQYCRHITVFLRTSPFASNDPYYANSNSVQLMLATQDKCDV 60 Query: 323 INAA--TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + A ++ +A W+ G+RYQ+AG+ML DF + Sbjct: 61 VAVAGAVKTHEATWRDGYRYQRAGIMLNDFCDINHS------------------------ 96 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 G G ++FAGQGI + W M+R +LSP Y TR SD+ + Sbjct: 97 ----GLGNVWFAGQGINKAWAMRRELLSPSYITRLSDIPNAR 134 >UniRef50_C1G404 Putative uncharacterized protein n=3 Tax=Paracoccidioides brasiliensis RepID=C1G404_PARBD Length = 803 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 12/121 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D + FYAS P L P+ V V+ N EA+ G++ + K Sbjct: 21 VILHFDYDCFYASVFEAENPALKSLPLAV--QQKQIVVTCNYEARRRGLRKLQLIKEAKR 78 Query: 61 LFRRCGVVCFSS-NYELYADMSNRVMSTLEELS-------PRVEIYSIDEAFCDLTGVRN 112 + VV + + D S + L+ RVE DE F D+T + + Sbjct: 79 VCP--DVVIVPGEDLTKFRDASKEIYLFLKGFVGVERGWGGRVERLGFDEVFLDVTSLVD 136 Query: 113 C 113 Sbjct: 137 Y 137 Score = 76.6 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 68/233 (29%), Gaps = 64/233 (27%) Query: 110 VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK-WQRQTGGVVDLSN 168 + + IR + Q T VGI+ +K LAKLA + K Q ++N Sbjct: 233 YQRLILGSHLASYIRHKLEQHKSYTATVGISTSKLLAKLAGNFHKPQNQTTLLPPYSVAN 292 Query: 169 LE------------------------RQRKLMSALPVDDVWGIGRRISKKLDAM------ 198 + + + + V GIG +I++KL A Sbjct: 293 NDSNNSKPNTAATDDASEPGQEAQGSNITRFLDDHDISAVPGIGFKIAEKLRAHVLGRKP 352 Query: 199 ---GIK---------TVLDLA---DTDIRFIRKHF-----------------NVVLERTV 226 GI TV D+ + + + + + Sbjct: 353 LGSGIYDQLPSEDRVTVRDVRLYPNMGPPLLDEILLSSNSSSSGGGGGSSLPRDIGPKIW 412 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGER-ITDYPSMRQAICSYAARAAEKL 278 + G + E +I S+G + +R+ + + A ++ Sbjct: 413 GLINGVDPSPVAEARDVPTQISIEDSYGHGQLAGLDVVRKELLALARSLVRRM 465 >UniRef50_C5NXP3 DNA-damage repair protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXP3_9BACL Length = 148 Score = 105 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 5/141 (3%) Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + A + A +LR + + + I S E +AS K+ PTQ ++ + + Sbjct: 1 MSEMAEQVAIRLRRVKKKAKSVHIHISYSR---IESKKSINASKKI-NPTQSTKQLTDHV 56 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 + + G + V + + LFDD ++ +DT+ K G Sbjct: 57 LSLFRSKYD-GGAVRSIAVRYDNLIDDNLTIYTLFDDIETIEKQRKIDKTLDTIRDKYGF 115 Query: 387 GTLYFAGQGIQQQWQMKRAML 407 ++ ++ +R+ L Sbjct: 116 LSVQNGSMLMEGSRVKERSKL 136 >UniRef50_A7BC74 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC74_9ACTO Length = 517 Score = 105 bits (264), Expect = 3e-21, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 89/277 (32%), Gaps = 25/277 (9%) Query: 28 VVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMST 87 V+ + V + A++ GV+ G + + ++C + + A + V+ Sbjct: 24 AVVHSERIEV--ASGAARSAGVRSGMSVREAMYVCP--DLICLPRDPDREARAFSAVVDA 79 Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR-EIRATVLQRTHLTVGVGIAQTKTLA 146 + ++ VE A C G + + + + + + VGIA Sbjct: 80 FDSVAAGVECVRPGVARCRARGPARWHGSEEAAALALVSAIEEAVGVECFVGIADGP--- 136 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV-DDVWGIGRRISKK-------LDAM 198 +A+ A + R + + + +P+ +W + ++ + L + Sbjct: 137 -VASLEAAREGR-------IVPAGENQLFLGRIPLHRALWAVPVAMTDRAADAIELLTGL 188 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 G+ T D + + F V E+ G L + +I Sbjct: 189 GVHTCADFLALGRGRVCERFGDVGEQLWNLASGGD-SALTPAGRIQPDITMECVIDVGGD 247 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 +M I A +++L + + ++ + Sbjct: 248 SINTMIVPIQRIARDLSQRLGRGGLVSQTLRIDVEDA 284 >UniRef50_A3WZ00 DNA polymerase IV n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZ00_9BRAD Length = 155 Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 54/164 (32%), Gaps = 12/164 (7%) Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + +F I D+ ++ + + + R + +L++ I+ +KT+ F Sbjct: 4 DRGAKTVSSETTFESDIRDFATLERLLWRLSERVSSRLKASELAGSTITLKLKTADFR-- 61 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S + TQ + I L G ++ G+ + +Q + Sbjct: 62 ----QRTRSQSISISTQLASKIFATCREILAREID-GTAFRLMGIGVSALR--SGSQAD- 113 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 + + S MD L K G + + ++ Sbjct: 114 -EADMLDFRSAHAERAMDDLRKKFGSVAVIRGIAY-DGPEKPRQ 155 >UniRef50_UPI0001745839 nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745839 Length = 525 Score = 104 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 112/357 (31%), Gaps = 42/357 (11%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 G P+ CV+ NA+A+ L V G + + LY D Sbjct: 60 GTPLA---REQACVLQVNAQAERLLVHPGMTASMARARC--ATLQF------LYRDAGAE 108 Query: 84 V--MSTLEEL----SPRVEIYSIDEAFCDLTGVRNCRDLT-DFGREIRATVLQRTHLTVG 136 + L + +P E S DL+ + + +GR I L R+ LT Sbjct: 109 LAAQEVLLQCSSNRTPFYESTSPGLCVLDLSSLPGVKGAELAYGRAICEE-LARSKLTAR 167 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV---WGIGRRISK 193 VG A+ LA LA H A + + E R + ALP++ + W + ++ Sbjct: 168 VGFARRADLAILAAHTAAP-------IRVMLGEEVDRACLGALPLEVLQPAW----QTAE 216 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 G+KTV DL + + G L+ P F Sbjct: 217 VFALWGVKTVGDLCKLPRAGVTERLGREGMLLWDLATGGRDRLLKLVRPVP-GYRVEEDF 275 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 I + + + ++L + + + + + +++ Sbjct: 276 EHSIECLEPLLFILRRHLQSLCDRLGATWRVAAAAVVELHFEDGSRHL------RELRIA 329 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 PT+D + +L+ + A + + G L LF+ P Sbjct: 330 EPTRDVELLFRVIHTALEGV-SAAAPIRGVVLEFRAVTPAGSQSL-LFERTLKDPNR 384 >UniRef50_UPI0001913C3A DNA polymerase V subunit UmuC n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. AG3 RepID=UPI0001913C3A Length = 110 Score = 104 bits (261), Expect = 6e-21, Method: Composition-based stats. Identities = 54/111 (48%), Positives = 73/111 (65%), Gaps = 3/111 (2%) Query: 103 AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 F D+ + +C D DFGR++R V T LT+GVG+ TKTLAK A A+K+W++ G Sbjct: 1 MFLDVRNIDSCIDFEDFGRQLREHVHSGTGLTIGVGMGPTKTLAKSAQWASKEWRQF-EG 59 Query: 163 VVDLS--NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI 211 V+ L+ N +R KL+S PVD++WG+GRRISKKL MGI T L LA + Sbjct: 60 VLALTSGNPKRTEKLLSLQPVDEIWGVGRRISKKLHTMGITTALQLARANP 110 >UniRef50_A0LTK7 Putative uncharacterized protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTK7_ACIC1 Length = 527 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 82/291 (28%), Gaps = 37/291 (12%) Query: 25 KPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRV 84 P V++ +++ + A+A GV+ G W + + S Sbjct: 35 TPCAVIARGR--ILSCSPAARAAGVRRGQRWREAQACCPELLGHTADP-----GRDSRVF 87 Query: 85 MSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE------IRATV---LQRTHLTV 135 + + ++ D + R +R + ++ V Sbjct: 88 EAVVRRVAEV--AAGPD----VVRPGLLVARAGGAARYWGGEEPLRQRIVDGVRSLGFPV 141 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 VGIA A A + + R ++ LPV + G +S+ L Sbjct: 142 RVGIADGTFAAVQAAYED-----------RIVPPGRSVDFLAELPVHRL---GPPLSEIL 187 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 G++T+ D R + + R RG P L I R F Sbjct: 188 PRFGLRTLGDFTSLPRRTVVTRWGEDAGRAHDMARGVPLRFLVRAHDPPV-IAVHRIFDP 246 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 + + A E+L C + ++ ++ + Sbjct: 247 PLDRVDTASFIARVAAEELHEQLTRRGLGCLRLVVEVRDESGRIHARAWRR 297 >UniRef50_Q5BYF2 SJCHGC07422 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q5BYF2_SCHJA Length = 179 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 2/67 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E +P+L PV V SN + N A+ GV+ G P F K L Sbjct: 113 IVHVDMDAFYAAVEIRDQPELRHHPVAVGSN--SMLSTSNYIARRFGVRAGLPGFLGKKL 170 Query: 62 FRRCGVV 68 + ++ Sbjct: 171 CPQLKII 177 >UniRef50_B5J847 Putative uncharacterized protein n=2 Tax=Octadecabacter antarcticus 307 RepID=B5J847_9RHOB Length = 150 Score = 103 bits (259), Expect = 9e-21, Method: Composition-based stats. Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 6/129 (4%) Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + QA+ ++A RAAEKLR ++ F T+ L+ P Y S S ++ T + D+ D+ Sbjct: 16 LFQAVTAHATRAAEKLRQHGLVAGTLTVFFHTNRHRLDRPQYSGSRSTRITTMSSDTFDL 75 Query: 323 INAATRSLDAIWQAG----HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 + AA R A W G + + KAG+ML D L LFD +P S LM+ +D Sbjct: 76 VEAARRGAQAAWPKGQGQTYGFTKAGIMLADLIRFEDRPLTLFD--VEKPKSAALMSALD 133 Query: 379 TLNAKEGRG 387 +N + G+ Sbjct: 134 RVNKRFGKK 142 >UniRef50_A5LXS6 DNA-damage inducible protein P n=2 Tax=Streptococcus RepID=A5LXS6_STRPN Length = 145 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 7/132 (5%) Query: 219 NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 + R+ RG ++ ++ I +++G+ + +++ + + + A L Sbjct: 21 GRLGYDLYRKARGIHNSPVKSNR-IRKSIGKEKTYGKILRAEEDIKKELTLLSEKVALNL 79 Query: 279 RSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH 338 + + + + I+ F+ + L TQD+ I A + + + + Sbjct: 80 HQQEKAGKIVILKIRYEDFS------TLTKRKSLAQKTQDASQISQIALQLYEELSEKER 133 Query: 339 RYQKAGVMLGDF 350 + G+ L F Sbjct: 134 GVRLLGITLTGF 145 >UniRef50_A1VWD4 DNA-directed DNA polymerase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VWD4_POLNA Length = 180 Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 56/199 (28%), Positives = 84/199 (42%), Gaps = 46/199 (23%) Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 SRSFG +T + ++ + +R A++L +H + I+ Sbjct: 2 VSRSFGRWVTQAVDLATSVAEFTSRVADELCCQHSAAGALMVLIR--------------- 46 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL-----F-- 361 P+ D+ ++ AA L I+Q G Y KAGVML + Q + Q L F Sbjct: 47 ------PSSDTAVVVKAALVGLRLIYQFGFLYAKAGVMLVELRPQALRQDELDISAGFMP 100 Query: 362 ---------------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ---QQWQMK 403 + P +LM +D LN + GRGTL FA G++ Q W MK Sbjct: 101 ISQMAGAGRLEEELVAQSPPLRDRAKLMAKLDALNGRYGRGTLRFAAAGLENDQQAWAMK 160 Query: 404 RAMLSPRYTTRSSDLLRVK 422 + SP YTT +D+L V+ Sbjct: 161 QVRRSPGYTTCWADMLIVR 179 >UniRef50_A9UX99 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UX99_MONBE Length = 381 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 46/263 (17%), Positives = 88/263 (33%), Gaps = 47/263 (17%) Query: 53 DPWFKQKDLFR----RCGVVCFSS---------NYELYADMSNRVMSTLEEL---SPRVE 96 + + L + V + +Y Y S +++ + S +E Sbjct: 1 MKPAEARKLLQPVAGHLLHVFAAPLCAETSGRVSYRPYRLKSRELVAVIRAQLAPSDVLE 60 Query: 97 IYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 + SIDE + L + E+R V T L V GIA K LAK+A+ AK Sbjct: 61 VASIDEVYIARPHTSPLH-LKAWADELRHLVHLHTGLHVSTGIAHNKFLAKIASSLAKP- 118 Query: 157 QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRK 216 G V ++ E + + LP + G+G + L + G+ T I + Sbjct: 119 ----AGTVVIAGPEEAHRALQTLPAKKLPGLGAK-GPPL-SYGVHT-----SFSPWSIPQ 167 Query: 217 HFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 ++ + K+ I + D ++ + A E Sbjct: 168 FDSLTGL------------PTGKARLVKKTIQ-----PIKGNDLSPIQPMLDDMAHELLE 210 Query: 277 KLRSE-HQYCRFISTFIKTSPFA 298 ++ ++ R ++ ++ A Sbjct: 211 RIAEHPRRHPRTLTVVVRRPDGA 233 >UniRef50_C0W385 DNA-repair protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W385_9ACTO Length = 552 Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats. Identities = 54/350 (15%), Positives = 97/350 (27%), Gaps = 53/350 (15%) Query: 41 NAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIY 98 + A++ GV+ G + + L + + E A RVM L + P V Sbjct: 54 SPRARSAGVRTGMRLRRARSLCPE--LTVLPAQPEREARSFERVMQALSTVLADPVVARP 111 Query: 99 SIDEAFCDLTGVRN----CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 L+G R + + V + T + VGIA + LA Sbjct: 112 G-----LALSGARGPARWLGSEEEVAESLVEAVARETGVECLVGIADSLLACILAARRG- 165 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS----------KKLDAMGIKTVL 204 + + + +S PV V + + L +G++ + Sbjct: 166 ----------VIVPAGQTAEFLSPWPVSSVL-VALATRREREQMKDLIETLTRLGLRRLG 214 Query: 205 DLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ-EIICSRSFGERITDYPSM 263 DLA + F + +R R G + P E++ + + Sbjct: 215 DLAQVPEADVTARFGPMGQRAHRLASGRAWILPRSSRPETDVEVVAE--LDPPVARADAA 272 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL-LTPTQDSRDI 322 A A +L + A E S L PT ++ Sbjct: 273 AFAARHLAEELVAQLLRRGMVAGRLRV------EAGCEDGSDLSRFWMLESAPTS--AEL 324 Query: 323 INAATRSL------DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 + L A + + + + G AQ L+ Sbjct: 325 RDRVRWQLEGWLAGRAGQPPASALVRLSLTAMELSAAGSAQTGLWAGPDE 374 >UniRef50_Q3BNM7 ImpB/MucB/SamB family protein (N-terminal) n=8 Tax=Bacteria RepID=Q3BNM7_XANC5 Length = 98 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 1/84 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D + FYASCE VF+PDL +P+VVLSNNDGC IAR+ EAKALGV MG P K Sbjct: 1 MFALIDGSNFYASCELVFQPDLRDRPLVVLSNNDGCAIARSDEAKALGVTMGQPIHKVPS 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRV 84 RR + S+N+ LY D+++R+ Sbjct: 61 QIRR-RLTLRSANFGLYGDIASRI 83 >UniRef50_C9Y1T2 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y1T2_CROTZ Length = 91 Score = 100 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 62/93 (66%), Positives = 74/93 (79%), Gaps = 4/93 (4%) Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 +DA+W+ GHRYQ AGVM+GD F QGVA+ FD+NAPR SE LM++MD LN + GRGTL Sbjct: 1 MDAVWRDGHRYQMAGVMMGDLFRQGVAR---FDENAPRVNSEALMSLMDKLNQQ-GRGTL 56 Query: 390 YFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 YFAGQGIQQ WQMKR MLSP YTTR +D+ V+ Sbjct: 57 YFAGQGIQQAWQMKREMLSPCYTTRLADVPTVR 89 >UniRef50_B6AK40 DNA polymerase eta, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AK40_9CRYT Length = 717 Score = 100 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 81/278 (29%), Gaps = 64/278 (23%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +R +LQ + T GI+ K LAKL K + ++ + M Sbjct: 304 IIYRVRNRLLQDLNYTCSAGISINKMLAKLVCSLRKPNGQSVLLSRWIN------QYMGI 357 Query: 179 LPV---------------DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVL 222 LP+ + + + ++ + DL + + K F Sbjct: 358 LPILKLRLLGGKLGKLVSEKLPMV------RMSS-------DLLQYNKGTLIKLFGEKNG 404 Query: 223 ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS-- 280 E RG + E + I+ S++F + + + + + +++ +E+ ++ Sbjct: 405 EYLYNTCRGIDLEAVIETQHYR-SILSSKNFYSGLDNLDEIFKWLHIFSSELSERSKNLY 463 Query: 281 --EHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL-DAIWQAG 337 + I+ S+ T ++ I A + ++ Sbjct: 464 KTLKIRPTKVGVTIR----NKLSQNRTRVQSINYSDHTPNTDIIYKTAKFIFLNRFYEPN 519 Query: 338 HR-YQK------------------AGVMLGDFFSQGVA 356 + QK GV L + Sbjct: 520 NSNIQKKESDINISYIKDIFPCKYLGVSLHNLIKNDSK 557 Score = 92.1 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 20/131 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D++AF+ + KP+VVL VIA N KA G+K G + Sbjct: 75 IIALIDMDAFFTQVQHKICNIPKDKPLVVL--QRNTVIAVNYPGKARGIKRGMKLQEALS 132 Query: 61 LFRRC----------------GVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDE 102 ++ + E+Y + S + + P +++I SIDE Sbjct: 133 IYPDLAVPETTYYNDKIEDNNNYNIKKISLEIYREASREIFDNIANYIPKCKIQISSIDE 192 Query: 103 AFCDLTGVRNC 113 A+ DL+ Sbjct: 193 AYIDLSENIKL 203 >UniRef50_D1SIT0 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=3 Tax=Actinomycetales RepID=D1SIT0_9ACTO Length = 557 Score = 100 bits (251), Expect = 9e-20, Method: Composition-based stats. Identities = 65/393 (16%), Positives = 118/393 (30%), Gaps = 44/393 (11%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 PVVVL N VIA + A+A G++ G + + + + Sbjct: 28 PATDPVVVLHANR--VIACSERARAEGIRRGLRRREAQGRCPH--LTVVDHDPGRDVRAF 83 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG-REIRATVLQRTHLTVGVGIA 140 V++ +EE+ VE+ G + I V Q + GIA Sbjct: 84 EPVVAAVEEVVAGVEVIRPGACATAARGPSRYLGGEEAAAERIVEHVAQSCAVESQAGIA 143 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR-RISKKLDAMG 199 A LA + R+ ++A PV+ + GR ++ L +G Sbjct: 144 DGVFAAGLAAREG-----------RIVAPGGTREFLAARPVEAL---GRPALADLLRRLG 189 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 ++T+ + A + F R G L P + + + E + Sbjct: 190 VRTLGEFAALPAGDVLARFGFDGALAHRLAGGRDDRPLAVRQPPAD-LTVTADYDEPVDR 248 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 + A A R E+L C + T+ + + + + Sbjct: 249 VDAAAFAARMLAERLHERLAGYGLACTRLGIEAVTAHGQELHRVWRHDGLLT-------A 301 Query: 320 RDIINAATRSLDAIWQAGHRYQK--------AGVMLGDFFSQG-----VAQLNLFDDNAP 366 I + LD W +G + AG++ G Q L+ + Sbjct: 302 AAIADRVRWQLDG-WLSGSNGRGGTRPARPTAGIVRLRLVPDGVLAQAGLQPGLWGET-- 358 Query: 367 RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 E+ + + G + A G + Sbjct: 359 GEERERAHRALSRVQGILGPEAVVTAVLGGGRS 391 >UniRef50_UPI0001874386 polymerase involved in DNA repair n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI0001874386 Length = 554 Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats. Identities = 52/307 (16%), Positives = 96/307 (31%), Gaps = 33/307 (10%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 AS + P PV ++ D V A + A+ GV+ G + L VV S Sbjct: 25 ASVTSQANPL---SPVAIVG--DSGVAACSPSARRAGVRRGQSRRHAEALCPELEVVEES 79 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 + + S V+ LE ++ VE A GV D E Sbjct: 80 AVRDAAEFES--VLQRLEVVAAGVEALRPGLAVVAARGVMRYYGGQDVALEKLLDAAAVP 137 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 + +G+A A LA GV+ + ++ + + ++ R Sbjct: 138 GVDCSLGLADDIVTAILAARR---------GVLVAPGEDEGKRFRQGISLVEL-----RA 183 Query: 192 SKKLD----------AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 L+ +G++T+ D+A R I F R ++L Sbjct: 184 ESALEMPAELAKSWQELGLRTLGDVAALPKRDIANRFGAQGARWHDLAC-RGEVRLVAPR 242 Query: 242 PTKQEIICS-RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + S +S+ + A + E+L + C ++ + S + Sbjct: 243 SLPPGLAVSYQSWESPLRRVDEASFVARFLAGQLHEQLFNHGYSCYRLAVVAQFSDGSEV 302 Query: 301 EPYYGNS 307 + + Sbjct: 303 RRVWRCT 309 >UniRef50_C6VUA5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VUA5_DYAFD Length = 503 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 58/386 (15%), Positives = 115/386 (29%), Gaps = 38/386 (9%) Query: 16 TVFRPDLWGK--PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 RP+L+G + V V A +AEAKALG++ G + + ++ Sbjct: 19 IRVRPELYGLEFALAVPERGRMVVTASSAEAKALGIEAGMVVADARAILPS--LIVLDDE 76 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDFGREIRATVLQRTH 132 E+ + +P V + + D D+TG + + ++ A + Q Sbjct: 77 AEVARQALRSLAEWCLRYTPTVALDTPDGLILDITGCAHLWGGEKAYVHDLIAKLHQA-G 135 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD-DVWGIGRRI 191 T +A T A A ++ E L+ P + Sbjct: 136 YTARAALAGT-VGAAWA------HAHFGVSGTIVAPGEPHNGLLKLPPAALRLP---PET 185 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 +K+ +G + R +R+ F L + + G +E T R Sbjct: 186 VEKMQKLGFYYIGGFVRIPARMLRRRFGEDLMEKLNKALGYAHEFIEPIRQTTP--YQER 243 Query: 252 -SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 E I + A+ +L E + R + Sbjct: 244 LPCLEPIVTATGIEIALQKLLETLCGRLAKEGKGLRKSVLRCYRVDGQV----------Q 293 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-----QLNLFDDNA 365 ++ T + + R + + G+ L + V Q ++D Sbjct: 294 RIDIVTNRASHHVKHLFRLFELKIKTIAP--GFGIELFLLEAPEVEDMSVTQETMWD-TT 350 Query: 366 PRPGSEQLMTVMDTLNAKEGRGTLYF 391 S + ++D + + G ++ Sbjct: 351 GGFESAAITELLDAVTGRTGTDAVHR 376 >UniRef50_B7AU37 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AU37_9BACE Length = 105 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D N FYAS E + P+L GKPV V + G V+ + AK GVK G ++ Sbjct: 5 ILHSDCNCFYASVELLHHPELRGKPVAVGGDPEARHGIVLTADYTAKRYGVKTGMALWQA 64 Query: 59 KD 60 K+ Sbjct: 65 KE 66 >UniRef50_Q86ZI6 Related to DNA Polymerase iota (POLI) n=3 Tax=Sordariaceae RepID=Q86ZI6_NEUCR Length = 753 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 5/110 (4%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D++ FYA P L P+ + + N A+ LGVK + Sbjct: 49 DLDCFYAQVYENKTPSLKSLPLGI--RQKSLLATCNYPARRLGVKKLMSIASALAICPDL 106 Query: 66 GVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNC 113 V+ + + D+S R+ + L S RVE +DE + D++ + Sbjct: 107 -VIVDGEDLTPFRDVSKRLYALLRSYSWNDRVERLGLDEVWMDVSDIIEY 155 Score = 88.2 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 76/286 (26%), Gaps = 61/286 (21%) Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN-LERQRKLMSALPVD 182 R + + T GI+ K LAKL + K + T + + E ++ M + + Sbjct: 231 RLKIEEE-GYTTACGISTNKLLAKLVGNVNKPRNQTTLLSLGPDDGEETVQRFMGSHQLR 289 Query: 183 DVWGIGRRISKKLDAMGIK---------------TVLDLADTD------------IRFIR 215 + GIG + + L I TV DL Sbjct: 290 KIPGIGGKTAAALSDYFISQSKPGSSSPPNPKEITVDDLLSCPGLSPSKLDSLLSSLSSS 349 Query: 216 KHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRS-FGERITDYPSMRQAICSYAAR 273 + + L+G ++ +I + F + +R+ + Sbjct: 350 SSTGTGTGKHILSLLQGHDPSPVKPARSIPTQISIEDTYFSCPLVTIEQIRRELVKITGS 409 Query: 274 AAEKLR-------SEHQYCRFISTFI----KTSPFALNEPYYGN-SASVKLLTPT----- 316 ++++ + R + + +T P YG S S L Sbjct: 410 LLKRMKTDLMDDDKKRWLARPKTLRLTTRPRTDPKEGRGYGYGRVSKSQGLPGYVFNNGN 469 Query: 317 ---QDS---RDIINAATRSLDAIWQAG-------HRYQKAGVMLGD 349 D R + + + V + + Sbjct: 470 AHGDDEIVQRLVAETLLPMFRELNPLNPRKGGKEYSIGLLNVCVTN 515 >UniRef50_B1LUJ0 Putative uncharacterized protein n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LUJ0_METRJ Length = 562 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 65/391 (16%), Positives = 133/391 (34%), Gaps = 34/391 (8%) Query: 26 PVVVLSNNDGCV--IARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P+ V + G + +A + EA+ALG+++G+P + + + + ++ E D R Sbjct: 15 PLAVAAEGSGGLRLVALDPEARALGLRVGEPLGRVRARI-GVPLQVYPADPEADRDALLR 73 Query: 84 VMSTLEELSPRVEIYSIDEA----FCDLTGVRNCRDLTD-FGREIRATVLQRTHLTVGVG 138 + +P V + EA + D+ G + R ++ A L R+ + + Sbjct: 74 LCRWASGYAPLVAPFGPGEAADGLYIDVAGASHLRGGEANLVADLAAR-LARSSVPAAIA 132 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV---WGIGRRISKKL 195 +A T A A R GG + + + ALPVD + G L Sbjct: 133 LADTPGGA-FAL------ARHGGGGRVVVPPGGAPEALRALPVDALRLDPG----TVAGL 181 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 +G++ + +L + + F L + + L +R F + Sbjct: 182 KRLGLRRIGELDALPRGPLARRFGAALLLRLDQALARRPEPLAPLTEAAAY-AAARGFLD 240 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 I + + + A A +L + + + AL G S + Sbjct: 241 PIGRQADIVRTVRDLMAETAPRLERDGLGACALRLSLHRVDGALRVLDLGLSRPERCPER 300 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 +++ L + AG ++ + + Q +L +A + Sbjct: 301 VA---ALVSLRLDRLGSALDAGFGFETVALAVTVTGPMPARQTDLGAASAADG----VGV 353 Query: 376 VMDTLNAKEGRGTLY---FAGQGIQQQWQMK 403 + D L + GR L A ++ + + Sbjct: 354 LADALAQRLGRALLRLEPRASHLPERADRSR 384 >UniRef50_B9JES9 Nucleotidyltransferase protein n=14 Tax=Rhizobiales RepID=B9JES9_AGRRK Length = 475 Score = 99.8 bits (248), Expect = 2e-19, Method: Composition-based stats. Identities = 62/364 (17%), Positives = 110/364 (30%), Gaps = 39/364 (10%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + A N +A+ +G+K+G + K + V+ + + + + + +P V Sbjct: 3 LTALNEKAEIIGLKLGLGVAEAKAICPALDVI--EEDPAADRKLLEAIANWCDRYTPLVA 60 Query: 97 IYSIDEAFCDLTGVRNCRDLTD-FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 I D F D+TG + + +I + L V I+ L+ Sbjct: 61 IDGKDGLFLDITGCAHLFGGEEALLEDILIRI-SGLGLDVRGAISSAPGLS--------- 110 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 W + + + ++ LPV + +G L +G+K V DL + Sbjct: 111 WAVARFDDSRVVPPDAMEEALAPLPVASLR-LGEETVAALQKLGLKQVGDLLVAPRAPLT 169 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + F L + + G + P Q + R E + + Q A Sbjct: 170 RRFGAQLLLRLDQAIGLTEEPISPRRPVAQ-LSAERRLAEPVQAEADILQLARELAEALK 228 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNS--ASVKLLTPTQDSRDIINAATRSLDAI 333 L + R + F ++ + + AS L P R I T AI Sbjct: 229 PGLEARGVGGRLFELLL----FRVDGAVFRIAAGASQPLREP----RRIAGLFTERFTAI 280 Query: 334 WQA-----GHRYQKAGVMLGDFFSQ--GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 G V L Q + L D + A+ G Sbjct: 281 HDDLDVGYGFEI----VRLNVLQHAPFDAMQGDF---VEEDRQGTSLAAFADRVAARLGP 333 Query: 387 GTLY 390 L Sbjct: 334 DCLQ 337 >UniRef50_A5VH01 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=4 Tax=Alphaproteobacteria RepID=A5VH01_SPHWW Length = 519 Score = 99.4 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 72/424 (16%), Positives = 134/424 (31%), Gaps = 51/424 (12%) Query: 16 TVFRPDLWGKPV--VVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 P +P+ + + V A +A A+ALG+ G K + + Sbjct: 28 RRDTPTP-TRPLVTAIPDHGRRIVAAVDAGARALGIAAGMTITKARSFAPELD--VVDAQ 84 Query: 74 YELYADMSNRV-MSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-DFGREIRATVLQRT 131 E + R+ + + SP V + D + D+TG +++ V Sbjct: 85 PEADVEGLRRLALWAGQRYSPIVAPDAPDGLWLDITGCAALFSTEAALLKDLHRRV-AAF 143 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 ++V + +A T HA + V RK ++ LP+ + R+ Sbjct: 144 GVSVQIAVADTAG----CAHAVARHVPAGRPVT--IEPSDHRKAIALLPIAAL-----RL 192 Query: 192 S----KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG---EPCLQLEEFAPTK 244 + L +G + V L + K F L R + + G EP + + Sbjct: 193 EADVVEGLRKLGFERVEQLIGAPRGPLAKRFGRSLHRRLDQALGAVAEPIEPIFPEHLPR 252 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 R F E I + Q I A ++L + R + + Sbjct: 253 ----ARRGFMEPIATAEAFGQVIGDLVADIVDQLGRVGKGARRLDCYFHRVDGHTQVIRV 308 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 G TP++D + ++ + + G + +++ Q + Sbjct: 309 GT------ATPSRDQAHLSKLLCAKIETV-EPGLGIESMTLLVSLMEPVAARQG---ESL 358 Query: 365 APRPG-SEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM--KRAMLSPRYTTR----S-S 416 L ++DTL+ + G L+ +M + A SP T Sbjct: 359 ERLGKPGPDLAALVDTLSNRFGSRCLHR---MAPHPSEMPERSATSSPALDTARGAGWDD 415 Query: 417 DLLR 420 DL R Sbjct: 416 DLPR 419 >UniRef50_Q6CDC9 YALI0C01573p n=1 Tax=Yarrowia lipolytica RepID=Q6CDC9_YARLI Length = 640 Score = 99.0 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 91/276 (32%), Gaps = 31/276 (11%) Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + +R V + T GIA+ +++AKLA+ K + + + Sbjct: 232 RISKRMREQVYEELKYTCSAGIARCRSVAKLASAQNKPNNQ------TVVRAGALNNYLK 285 Query: 178 ALPVDDVWGIGRRI-SKKLDAMGI-----KTVLDLADTDIRFIRKHFNVV--LERTVREL 229 + D+ G+G ++ + L+ +G+ + + + +++ E+ Sbjct: 286 KKSLTDIGGMGGKLGEEVLEKLGLDKESKDNITQVQALSKQQLQQKLQNASLTEKVFNLA 345 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKLRSEHQ---YC 285 RG L+ + ++ +++F + D + +A A ++ + C Sbjct: 346 RGNLYRGLKT-RIELKSMLSAKNFARVPLKDRKEAELWLVVFAGELAMRIVEHEKELGTC 404 Query: 286 RFI-STFIKTSPFALNEPYYGNSASVKLL-TPTQ-DSRDIINAATRSLDAIWQAG----H 338 R + ++ + F +P S L T ++ A + L I + Sbjct: 405 RRPRTVSLQHARF---KPMVKRSRQQDLPLVHTNKLKEELFAAGVKLLKLIENEPEHDAY 461 Query: 339 RYQKAGVMLGDFF--SQGVAQLNLFDDNAPRPGSEQ 372 + + F G + + F + Sbjct: 462 PISMLSLSVTGFVELPAGASIGHFFKTITTEAREKA 497 Score = 92.1 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 23/127 (18%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+A E V G PV DG + A A+A G+ + + L Sbjct: 26 IVHLDMDAFFAQVEQVRLGLPPGTPVA-CRQWDGLI-AVGYAARASGITRHMRAPEAQKL 83 Query: 62 FRRC------------GVVCFSSNY---------ELYADMSNRVMSTLEELSPRVEIYSI 100 + + +N + Y +V++ +++ S VE S+ Sbjct: 84 CPNLVMAHAASFKRGEDMWEYHANPSADDYKISLDPYRQAGKKVLNIVKQYSSVVEKASV 143 Query: 101 DEAFCDL 107 DE++ DL Sbjct: 144 DESYLDL 150 >UniRef50_Q4PIG2 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PIG2_USTMA Length = 865 Score = 99.0 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 68/227 (29%), Gaps = 26/227 (11%) Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + +R VL T GI KTL+KL + K + + S Sbjct: 411 ELMNRVRQNVLDELGYTTSAGIGSNKTLSKLCSSWRKPNGQ------TIMRPCSVANFFS 464 Query: 178 ALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 +LP + +G ++ + TV DL + ++ F LRG + Sbjct: 465 SLPFQKIRFLGGKLGNAMGAEWNSATVSDLWGVGLDEMQAKFGEEARWVYNVLRGIDYSE 524 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA-----EKLRSEHQYCRFISTF 291 + E Q ++ S+S IT + + A + + + + + Sbjct: 525 VRERVNN-QTMLASKSVRPAITKPEEATHWLDILSTELAIRLREAREERRNLWPKTLVL- 582 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQ------DSRDIINAATRSLDA 332 + + S T ++ I+ + + Sbjct: 583 -RY----IRAGSVPRSRQTAFPF-TNPNNQDDLAKVILKKGQKLWEE 623 Score = 81.3 bits (200), Expect = 6e-14, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 47/132 (35%), Gaps = 26/132 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGK-PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + A CDV+A YA E P+ V +IA N A+ GV + + Sbjct: 115 VVAHCDVDAAYAQFEASRLGLDATVVPIAV--QQWQGLIAVNYPARDAGVSRFESIPEAL 172 Query: 60 DLFRRCGVVCF--------SSNY-------------ELYADMSNRVMSTLEELSPR--VE 96 +V +Y + Y S ++++ + P VE Sbjct: 173 KKCPDLHLVHVATYAHGSNKPDYHPDPKPETHKVSLDHYRRESTKILTIFKRTCPHGAVE 232 Query: 97 IYSIDEAFCDLT 108 SIDE++ DLT Sbjct: 233 KASIDESYFDLT 244 >UniRef50_B6BEE1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=17 Tax=Rhodobacterales RepID=B6BEE1_9RHOB Length = 492 Score = 98.6 bits (245), Expect = 4e-19, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 122/387 (31%), Gaps = 38/387 (9%) Query: 12 ASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVC 69 AS E V R P + N + NA A G+ G + + Sbjct: 18 AS-ERVLRRCPVDGPFALTLKQQNANRIYCLNAAASEQGLHPGMAYADARAFCPDLQSGA 76 Query: 70 FSSNYELYADMSNRVMSTL----EELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG-REIR 124 + + L P V D D+TG + + ++R Sbjct: 77 AEPEQD------QLFLRLLCRWAARYCPWVGAEGTDGLVLDITGAAHLFGGEEAMLADMR 130 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 +++ L+V G+A T+ A A + ++ + LP+ + Sbjct: 131 MRLMRA-GLSVQAGLADTRG----AAWALAHYGEG------IAPTGETLPSLKHLPIAAL 179 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK 244 I +IS L +G++++ DLA + + F L R + + G + AP Sbjct: 180 R-IDEQISVTLQRLGVRSIGDLAGAARAPLNRRFGPALLRRLDQALGTEPEAISPQAPPP 238 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 + E I + +KL+S + R + ++ Sbjct: 239 H-YAVRMTLPEPIGLLSDVMTGAERLLLPLCDKLKSHEKGARELHLTLRRVD------QG 291 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 ++L P +D + I+ R L+ I AG + S V Q + Sbjct: 292 HQQVELRLARPLRDPQRILPLFERGLNEI-DAGFGIDMLRLEATQVESLPVQQ----SSH 346 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYF 391 G ++L ++ L + G + Sbjct: 347 VSDGGKDKLDDLISRLGTRIGLENIQR 373 >UniRef50_C6MGZ1 DNA-directed DNA polymerase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MGZ1_9PROT Length = 76 Score = 98.2 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%) Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 ML + Q +LF +P QLM +D +N + G+GT+ A QGIQQ+W M+R Sbjct: 1 MLSGLVDEQTRQADLFG-LSPISNKTQLMETIDNINDRMGKGTIRLASQGIQQRWLMRRE 59 Query: 406 MLSPRYTTRSSDLLRV 421 S +TT +LL V Sbjct: 60 KKSQNFTTEWEELLTV 75 >UniRef50_D2LKG4 DNA-directed DNA polymerase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKG4_RHOVA Length = 109 Score = 97.8 bits (243), Expect = 6e-19, Method: Composition-based stats. Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 1/103 (0%) Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +GI TK LA +AN AKK + GV +L ++ +++ + V D+WG+GR+ S L Sbjct: 5 TIGIGCTKALATIANRMAKKD-PEAKGVFNLFDVADIDAVLAKIEVGDIWGVGRQWSAWL 63 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + GIKT LDL TD R +R VV ER REL G CL LE Sbjct: 64 EEQGIKTALDLKRTDPRHVRTKMTVVGERIARELNGVSCLPLE 106 >UniRef50_A1WWK8 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WWK8_HALHL Length = 175 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 45/98 (45%), Positives = 64/98 (65%) Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 + P + VWG+G+R++ +L +GI+T DLA R IR+HF V L RT ELRG C Sbjct: 19 NTTPENAVWGVGQRLADRLAELGIQTTEDLARLPPRRIRQHFPVTLARTAEELRGCACHD 78 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 LE +Q+I+CSR+FG + D P++R+A+ YAARA Sbjct: 79 LESEPAPRQQIVCSRTFGTPVRDKPALREAVADYAARA 116 >UniRef50_Q3SQD1 DNA-directed DNA polymerase n=14 Tax=Bradyrhizobiaceae RepID=Q3SQD1_NITWN Length = 501 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 59/374 (15%), Positives = 117/374 (31%), Gaps = 23/374 (6%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV 95 + A N A LG+ +G P + + F ++ A N + + +P V Sbjct: 2 VISALNDAAARLGLTIGLPLANARAICPDID--VFDADETADARTLNGIADWCDRFTPLV 59 Query: 96 EIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 + D+TG + + L R V IA T A+ Sbjct: 60 ALDPPHGLLLDITGCAHLFGGEAALMNALCSALTRQGFAVSAAIAGTPACARALTRHV-- 117 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 R + + + ++ LPV + G I++ L G+KT+ D+A I Sbjct: 118 HGR-------IVAPGEELEAVAPLPVFTL-GTDDEITRGLRRAGLKTIGDVAVRGRHEIA 169 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 F + + G+ + P I + F E I ++ + A Sbjct: 170 ARFGAAFTALLEQTLGQRDAPINPRRPPPDYI-VEKRFAEPIATDSAIAMTLAGLARTLI 228 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 + + + R + + A+ V + +L Sbjct: 229 AAMEKQGKGARHLEAGFFRTDGAVRVITVETGRPVTRGE---IVDRLFRERLDALADPLD 285 Query: 336 AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 G + + S Q +L +A ++++ ++D + A+ G + Sbjct: 286 PGFGFDLVRLSAVRTESVVHEQRDL---DARVQDNDEVAALIDRIAARIGSHRV---VVH 339 Query: 396 IQQQWQM-KRAMLS 408 + Q + +R LS Sbjct: 340 LPQDTHIPERGALS 353 >UniRef50_D0CTA7 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=12 Tax=Rhodobacterales RepID=D0CTA7_9RHOB Length = 550 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 66/424 (15%), Positives = 128/424 (30%), Gaps = 62/424 (14%) Query: 26 PVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P+ V++ + + N A+A G+++G P + +V N A Sbjct: 30 PLAVVAEQSNMQVITSLNTAAQAAGLRVGQPVRDAHAMC--AALVTRPRNAPAEAAFLTA 87 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + + SP V + D DL+G + + ++ T L+V +GIA T Sbjct: 88 LRRWAGKFSPWVAEEASDGLIVDLSGCAHLFGGEEALLDVIETDCADMGLSVQMGIADTL 147 Query: 144 ----TLAKLAN---------------------------HAAK----KWQRQTGGVVDLSN 168 LA+ A H K GG ++ Sbjct: 148 GAAWALARYAGQEATSDRNGDAISQEARATRARAGKRRHWTKGGAAPQVVAVGGGARIAP 207 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 + ++ LP+ + + + +L+ +G++ + DL + + F L + + Sbjct: 208 PGQAYGALAPLPIAALR-LDDQTVAQLNRLGLRRIGDLLGQPRASLARRFGRGLVLRLDQ 266 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G + P + I + AI +L + + R + Sbjct: 267 AMGSAPEPVSPARPPHH-FAVRMTLPNPIGLAEDVMAAIDRMLPTLCARLEEKARGARTL 325 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRY---QKAGV 345 + A G L P+ D I +D I AG+ + A V Sbjct: 326 RLEAHRTDQAAEIIEIG------LARPSHDKHRIRPLLEMKIDQI-DAGYGIDMLRLAAV 378 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSE-----QLMTVMDTLNAKEGRGTLYF---AGQGIQ 397 L + + + L ++ L A+ G + A I Sbjct: 379 QT---EPVHARTLTGHAEASRAVRNRLEGNTALDDLIGKLGARVGLDAITRQHPAASHIP 435 Query: 398 QQWQ 401 ++ Sbjct: 436 EKTA 439 >UniRef50_B9PWD1 DNA polymerase eta, putative n=3 Tax=Toxoplasma gondii RepID=B9PWD1_TOXGO Length = 1091 Score = 97.1 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 9/116 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FY E +P+VV IA N A+ LG+K GD + Sbjct: 14 VVVHLDLDCFYCQVEHRRLGIPVSEPLVV--RQWNLAIAVNYAARRLGIKRGDLCTVLEK 71 Query: 61 LFRRCGVVCFSSNYE-------LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG 109 F ++ S + Y S+ V+S + E P VE SIDE F DL+ Sbjct: 72 KFPNLHIIHVPSRPDTDKVSLERYRLASDEVLSIIVEQYPCVERASIDEVFIDLSN 127 Score = 64.3 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 74/251 (29%), Gaps = 43/251 (17%) Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV------- 184 T+ +A++K LAK A+ K ++ L E + L + D+ Sbjct: 329 QFTMSGAVARSKFLAKTASAKFKPDRQ------VLVPSELAADFLGPLELRDLRGFRGKR 382 Query: 185 -WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAP 242 I K V DL + + E L+G+ + + Sbjct: 383 GRRIAAAFPDK------PRVKDLREIPFDHLVTKLGREEAESLSNVLKGDLEGEGVKANL 436 Query: 243 TKQEIICSRSFGERITDYPS-------MRQAICSYAARAAEKLRSE----HQYCRFISTF 291 + ++ ++F D + + + E + + ++ + Sbjct: 437 RVKSMLAFKAFPPGAADPVQLAMNRGGLADWLSGLCLELFRRAEQEFSAYKRAPKTLTVY 496 Query: 292 IKTSP--FALNEPYYGNS-ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK-----A 343 +T P F S L PT +I A +L + + + Sbjct: 497 YRTGPPWFQQLSRSGPLSPRRKALAAPT--LEEIQRATLAALLRLSRDCGA-RLPPCVKI 553 Query: 344 GVMLGDFFSQG 354 G+ + DF + Sbjct: 554 GLAVSDFENAE 564 >UniRef50_UPI00016987CF DNA-directed DNA polymerase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016987CF Length = 143 Score = 96.3 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 11/144 (7%) Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 F E + +R + +A R + + ++ ++ + F ++ +L Sbjct: 1 FAEDVRQQSLLRSRLQRLSAEVGRLARYKGLSGQVVTLKLRLAGFE------THTRQRRL 54 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP----RP 368 + P I A + G + GV L DF G +LF+ R Sbjct: 55 VIPVDTDDLIFATAWQLYQESQLVGRPVRLIGVGLSDFEH-GPQSEDLFEATPERQMVRQ 113 Query: 369 GSEQLMTVMDTLNAKEGRGTLYFA 392 +Q+ +D + AK L Sbjct: 114 RRKQVFKTLDEVAAKFDSTLLTRG 137 >UniRef50_Q6BM10 DEHA2F09196p n=2 Tax=Debaryomyces hansenii RepID=Q6BM10_DEBHA Length = 770 Score = 96.3 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 42/129 (32%), Gaps = 24/129 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D+NAF+A E V PVV +IA + A+ G+ D + Sbjct: 44 VVAHVDLNAFFAQVEQVRLNLTADDPVVCA--QWQSLIAVSYAARKFGIGRMDTIQSARQ 101 Query: 61 LFRR----CGVVCFSSN------------------YELYADMSNRVMSTLEELSPRVEIY 98 V + + Y S ++M+ E VE Sbjct: 102 KCPNIIIAHAAVFKKGDSYWSYIRGLPDRSVHKVSLDPYRRESRKIMNIFREYCDLVEKA 161 Query: 99 SIDEAFCDL 107 S+DE F D Sbjct: 162 SVDECFLDF 170 Score = 72.4 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 89/269 (33%), Gaps = 42/269 (15%) Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + E+R V + T G+ + K +AK+A K + ++N + Sbjct: 249 SQLLYEVRQQVFEELGYTTSGGLGKNKIIAKIAGGFLKPDNQTIIRTCSMNN------FL 302 Query: 177 SALPVDDVWGIGRRIS----KKLD-AMGIKTVLDLA-DTDIRFIRKHF---NVVLERTVR 227 + D G+G + ++L+ + ++ + + + I+K F + ++T + Sbjct: 303 KNFQLIDFNGMGGKTGDVIMQRLEVPPDVNSISFIRNNFSLEDIQKEFANDPPLAQKTYQ 362 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGE--RITDYPSMRQAICSYAARAAEKL------- 278 +RG +L + ++ ++F + + I +A +L Sbjct: 363 MVRGNYRQELS-LRTEIKSMMSRKNFLSKNPVNNIHDAYDWIKVFAGDLYGRLIELDDES 421 Query: 279 ----------RSEH--QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 R + + + IS I ++ + + + L ++ Sbjct: 422 LNLSMSQESRRGKGYIRRPKTISIQISSTSYVKHSKQMQLTIVRSLEK---LKENMEVTG 478 Query: 327 TRSLDAIWQAGHRYQKA--GVMLGDFFSQ 353 R L I K G+ L + + Sbjct: 479 LRLLMDILDNSTNVHKLNNGISLKELDKK 507 >UniRef50_Q0ANL5 Putative uncharacterized protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ANL5_MARMM Length = 449 Score = 96.3 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 58/315 (18%), Positives = 103/315 (32%), Gaps = 33/315 (10%) Query: 99 SIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR 158 +D D+TG + +V + A T LA A R Sbjct: 40 GLDGLILDITGCTRLFGGETALLDAMMEGFAELGFSVRLAAAPTIGLAWGAARFD-PDSR 98 Query: 159 QTGGVVDLSNLERQRKLMSALPVDDVW---GIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 + + ++ALPV+ + G+ S +L A+G+ L + Sbjct: 99 NRP---LCIDPDTAADRLAALPVEALRLAEGV----SSRLRALGLTRAGLLLQQPRAALA 151 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + F + L R + + RG+ L+ P + R F E + ++ A+ Sbjct: 152 RRFGLDLPRRLDQARGQESEPLDPIRPARAFRSSLR-FAEPVPGLDPIKTALPHLVGPVC 210 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 ++L + + R + + S G +A+ + DS II SLD + Sbjct: 211 DQLTNAGRGARRLVLSLVGSNGRAVRVAIGTAAAER------DSGHIIRLLGESLDRLEA 264 Query: 336 AGHRYQKAGVMLGDFFSQG-----VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 GV + Q L PG E ++D L + G + Sbjct: 265 DF----GLGVEALHLTAPSTAAFTARQARL----DGTPGEEATSHLVDRLRLRLGETGVR 316 Query: 391 FAGQGIQQQWQMKRA 405 A ++ W +RA Sbjct: 317 RAAS--RESWSPERA 329 >UniRef50_A1SHX1 Putative DNA-directed DNA polymerase n=1 Tax=Nocardioides sp. JS614 RepID=A1SHX1_NOCSJ Length = 520 Score = 95.9 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 54/272 (19%), Positives = 87/272 (31%), Gaps = 18/272 (6%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P V S N V A NA A+A GV+ G + V + + A V+ Sbjct: 28 PAAVFSAN--IVQACNAGARAFGVRRGMRRRDAQGRCPELKVYAAIPDRD--ARAFEPVL 83 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL-TVGVGIAQTKT 144 + +EEL P V L + A L + VG+A Sbjct: 84 AAVEELRPGVAPLRP--GLVALRAPGRFYGGEPAAAALVAERLVGLGVWDCRVGVADELF 141 Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV---DDVWGIGRRISKKLDAMGIK 201 A+ A A + + LPV +D+ GR L +G++ Sbjct: 142 TAEQAARRAAP------QDCFVVEPGESVPFLRGLPVEVIEDLPD-GRDAVSLLKRLGLR 194 Query: 202 TVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 T+ L D +R F + R + G +L E+ C F + Sbjct: 195 TLGQLGDLAAADVRDRFGRQVAWVHRVV-GGDGAELLATRIPPPELACHVDFEPPLDSAE 253 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 ++ ++ A R L +H C + + Sbjct: 254 TIGFSVRQTADRFVAGLARQHLVCTEVRIEAR 285 >UniRef50_C4DV05 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DV05_9ACTO Length = 505 Score = 95.9 bits (238), Expect = 3e-18, Method: Composition-based stats. Identities = 54/369 (14%), Positives = 101/369 (27%), Gaps = 30/369 (8%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 PV V+ + V A +A A+ GV++G + ++ + E A V+ Sbjct: 27 PVAVVIAHR--VSACSATARRTGVEVGMRRRDAAAVCPDLRLLAADPDAE--AAGFEPVI 82 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE-IRATVLQRTHLTVGVGIAQTKT 144 + LEEL P V++ G + E I + Q L VGIA Sbjct: 83 AALEELVPAVQVLRPGWCGLPAKGPSGWYGDEEAAAETIVEYIAQLCDLEARVGIADGFW 142 Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVL 204 A +A + + + ++ + + G+ + + L +GI T+ Sbjct: 143 PASVAAVSGA-----------IVPTGHNAQFLADRNIGLL-GL-PPLVELLRRLGINTLG 189 Query: 205 DLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 A I + V R RG P + + E + + Sbjct: 190 AFAALPRDAIAERLGTVGLRAHARTRGHDERLPAPRTPPVD-LDVFADYDEPLDRVDTAA 248 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 A + A + L + C + T+ + +L + + + Sbjct: 249 FAARTLAEQLRATLAARELACTRLVIEAITAQGTGLRRVW---RHRTVLRASDVADR-VR 304 Query: 325 AATRSLDAIWQAGHRYQKAGVMLG--DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 G L Q L+ + Sbjct: 305 WQLDGWLTHGGTGAIVHL---RLSPEGIVDASALQDGLWGQMGDGLELADGSAT--KVQD 359 Query: 383 KEGRGTLYF 391 G + Sbjct: 360 LFGPEAVLH 368 >UniRef50_Q4PF20 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PF20_USTMA Length = 763 Score = 95.5 bits (237), Expect = 3e-18, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 5/116 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFY S P L G P+ + V + EA+A GV D Sbjct: 60 VIIALDLDAFYVSACRKRDPSLVGIPIGI--QQKALVATISYEARAAGVGKLDSIKDALK 117 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR 114 +V + + +S++V + + RVE +DE FCD+T + + Sbjct: 118 KCPDMILVNGE-DLTYFRQVSSQVWRLVRSIVWEKRVEKLGMDELFCDVTEMVDHH 172 Score = 80.5 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 51/195 (26%), Gaps = 54/195 (27%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG------------- 162 +R + LT GIA +K+LAKL K Q+ Sbjct: 239 AARLAYYMRQRISDEVGLTCSAGIAPSKSLAKLVGALNKPNQQTAFCPPVVGLVSDRCKR 298 Query: 163 --VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM--------------GIKTVLDL 206 ++L+ M L + + G GR + K+ +TV L Sbjct: 299 ANSIELTLERHVTAFMDPLDLRKLPGFGRVVVDKIRDHLNHDSNASAEQSNRNRQTVSSL 358 Query: 207 AD------------------------TDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFA 241 + + + + F V+ R + G + Sbjct: 359 VEPIGLSDDEEEKVKVKVFVGAARKMLSLEAMVELFGEVIGPRLWALVNGRDAEPVIPAP 418 Query: 242 PTKQEIICSRSFGER 256 ++ ++ Sbjct: 419 DFPLQLSIEDTYPYP 433 >UniRef50_Q5KGG8 Eta DNA polymerase, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KGG8_CRYNE Length = 690 Score = 94.8 bits (235), Expect = 6e-18, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 25/132 (18%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A CD++A YA E V P++ +IA N A+ G+K K + Sbjct: 37 IAHCDIDAAYAQFEQVRLGLPDDIPLICA--QWQSIIAVNYPARKYGIKRFTSIEDAKKM 94 Query: 62 FRRCGVVCF---------------------SSNYELYADMSNRVMSTLEELSPR--VEIY 98 + + ++Y S ++++ +E PR +E Sbjct: 95 CPHLRIQHVATYRNGESEAGYWDDVDPRTHKVSLDVYRRESLKILAIFKEKIPRGEIEKA 154 Query: 99 SIDEAFCDLTGV 110 SIDEAF DLT + Sbjct: 155 SIDEAFLDLTPM 166 Score = 91.3 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 30/242 (12%), Positives = 69/242 (28%), Gaps = 27/242 (11%) Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI-SKKLDAMGIKT 202 ++ L + K + + ++ D+ +G ++ + G KT Sbjct: 260 LMSNLCSAWKKPNNQ------TILRTAAVPAFLNGRDFTDIRSLGGKLGAAIAQQFGAKT 313 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 V D+ + +++ F LRG ++ + T + ++ S+S +T Sbjct: 314 VGDMLTVSLDEMQRKFGEESIWVYNILRGIDHSEVTDRVAT-KSMLASKSIRPAVTSPQQ 372 Query: 263 MRQAICSYAARAAEKLRSE-----HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 Q + A +LR + + + + S + Sbjct: 373 GHQWLSILAGELNVRLRQSREIMPGLWPKTLVLSYR------QGIEPTRSRQIPFPFTRN 426 Query: 318 -DSRDIINAATRSLDAIWQA----GHRYQKAGVMLGDFFSQGVAQL---NLFDDNAPRPG 369 + I+ A + D Q + + Q F + P+ Sbjct: 427 LSTDYIMKYAKKLWDEATQPMLKGNMKLNVIALSFTGLEKLEEGQQGIEGFFSNTKPKAA 486 Query: 370 SE 371 E Sbjct: 487 DE 488 >UniRef50_A5DE10 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DE10_PICGU Length = 673 Score = 94.4 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 26/144 (18%) Query: 1 MFALCDVNAFYASCET-VFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + AL D+NAF+A E + V V +IA + A+ G+ D + Sbjct: 43 VIALVDMNAFFAQVEQTRLNLSIDDPVVCV---QWSTLIAVSYAARKYGINRMDNVKSAR 99 Query: 60 DLFRR----CGVVCFSSNY------------------ELYADMSNRVMSTLEELSPRVEI 97 + V N + Y S +++ +++ VE Sbjct: 100 EKCPDVILAHAAVFKKGNPYWSYVDGLPNQAEHKVSLDPYRRESRKIIKIIKQHCDVVEK 159 Query: 98 YSIDEAFCDLTGVRNCRDLTDFGR 121 S+DE + DL + R L +F + Sbjct: 160 ASVDECYMDLGREVHKRLLLEFPQ 183 Score = 71.3 bits (174), Expect = 6e-11, Method: Composition-based stats. Identities = 33/251 (13%), Positives = 78/251 (31%), Gaps = 36/251 (14%) Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +IR + T GIA+ K LAKLA K + + ++ Sbjct: 250 QVLYKIRKLIYDELSYTTSGGIARNKFLAKLAAGFNKPDNQ------TIIRSASIPNFLT 303 Query: 178 ALPVDDVWGIGRRISKK-LDAM----GIKTVLDLA-DTDIRFIRKHF---NVVLERTVRE 228 +DV G+G + L G+ + L + ++ I+K + ++ Sbjct: 304 NFQFNDVSGMGGKTGDTVLARFDTPPGVNSFTHLRENYTLQDIQKEYPQDPQFAQKIYDI 363 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSF--GERITDYPSMRQAICSYAARAAEKL-----RSE 281 +RG+ L + ++ ++F + + + YA + + Sbjct: 364 VRGDDKQPLR-LRTDVKSMMSRKNFIPQRPVKTLFDIFSWLKVYAGDLHNRFIDLDDENM 422 Query: 282 HQYCRFISTF-----IKTSPFALNEPYYG---NSASVKLLTPTQDSRDIINAA----TRS 329 + +S ++ +L + S V L + + + Sbjct: 423 NLSMSSVSHKEKGVLVRPKTMSLQIGFLSGARISKQVTLPVF-RSLDKLHQVVESTSLKL 481 Query: 330 LDAIWQAGHRY 340 + + ++ + Sbjct: 482 MKEMLESSGKI 492 >UniRef50_UPI0001C31AE4 hypothetical protein Cwoe_4251 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AE4 Length = 395 Score = 94.4 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 59/368 (16%), Positives = 104/368 (28%), Gaps = 28/368 (7%) Query: 10 FYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 F + R +L P + + V + A+A GV+ G P + G+ Sbjct: 10 FQLTVAAGDREELLRAPAALAPEAGREARVGEVSLAAEAFGVRPGMPLGEALARCP--GL 67 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATV 127 + AD R++ LE + VE A G+ T + A Sbjct: 68 ALVPPDPAGVADAWERLLVRLESIGAAVEPERPGLACFQAQGLVRLHGGTL--ERVLAAA 125 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI 187 +G ++ AA R + L + R ++ LPV + Sbjct: 126 RTALRHPARIGTGPSRF----CALAAATRARARKPQIVLGDERTARDYLAPLPVALLR-- 179 Query: 188 GR----RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 GR + + L +G++T+ +LA + F +G P Sbjct: 180 GREETAALPEPLARLGVETLGELAQLPRAAVADRFGAPGLLAWELAQGRDGALRPRELPE 239 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 + I + A+ R + + + R + A Sbjct: 240 R---IEEELELPEALAGTQLDHALGLLVDRLLARRERDGRTLRAVVL------AATLVEG 290 Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD 363 V D + A T L + R + V G S Q +L D+ Sbjct: 291 GTWREQVPFREALADPARMRLALTPRLALLPAPAERLRLTAVRFGAVASD---QRSLLDE 347 Query: 364 NAPRPGSE 371 + Sbjct: 348 AETARRAR 355 >UniRef50_D2DXS2 Nucleotidyltransferase/DNA polymerase n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXS2_9BACT Length = 493 Score = 94.4 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 63/403 (15%), Positives = 120/403 (29%), Gaps = 50/403 (12%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQK 59 MFA V F C P+L + + ++ N V A+ GV +G + Sbjct: 1 MFAAIYVPDFALQCVLRRDPELRDRLLAIVDGNLPARVRQMTPVARDHGVTVGMTTTQA- 59 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL---TGVRNCRDL 116 L R ++ ++ L S ++ E SP +E E + N + Sbjct: 60 -LGRSPTLLFRTA--GLLDAESACLLQCAETFSPWLEATG--EGVVTIEWRGDAENRSSV 114 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 I L T +G+A T LA LA H A + +ER + Sbjct: 115 EAVAESIVRQ-LAALAFTARIGLAATPALALLAAHCASP----------VRIVERAVDFL 163 Query: 177 SALPVDDVW--------GIGRRISK---KLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 S LP++ + + + L G+ T+ + A + Sbjct: 164 SPLPLETLSADAAMCSDEVQAAREEAFRLLHRWGLHTLGEFAALPREQVVARLGGEAAEL 223 Query: 226 VRELRGEPCLQLEEFAPTKQEIICS-RSFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 G L + I + + + + + A +L + ++ Sbjct: 224 WDRAAGRAGRPLRLVRAPE--IFAEAMELEHEVETLEPLLFILRRFLEQLAARLTAAYRV 281 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 + + + A + + ++ PT D + L+ I +A Sbjct: 282 AATLELRLGFAAGAPH------AHEFRIPAPTCDVEVLFRIVETHLETI-RAEAPIIAVE 334 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGS-----EQLMTVM--DTL 380 + Q LF+ P +L ++ D + Sbjct: 335 LRA-RPTRAEHKQFGLFESGLRDPNKFFETLARLQALLGNDRI 376 >UniRef50_D0WMM1 Putative DNA repair polymerase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMM1_9ACTO Length = 516 Score = 94.4 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 85/265 (32%), Gaps = 31/265 (11%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 +P VL G V+ NA A+ LGV+ G + + VV + R Sbjct: 25 DEPAAVLG--VGGVVCANAWARRLGVRTGMRKREALSICPELVVVQRDVRRDA-----LR 77 Query: 84 VMSTLEELSPRVEIYSIDE----AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGI 139 S L+ + V + E F VR + + + VG Sbjct: 78 FESVLQAVDAHVAHVVVVEPGRVIFPARGAVRAAGSMKALAEALIGQIADVAGCEAHVGC 137 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD-DVWGI--GRRISKK-- 194 + A LA + ++E + + V+ + G+ RR + Sbjct: 138 GEGTLAALLAAQSD-----------VFLDVEGSAQFLKRTKVEGTLVGVVPSRRAEARSC 186 Query: 195 ---LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 L +G++TV DL D + F + + RG L A T I+C+R Sbjct: 187 LELLATLGVRTVGDLTDLGAAAMASRFGEMGSLLWQLARGRDVH-LPAEATTSPGIVCTR 245 Query: 252 SFGERITDYPSMRQAICSYAARAAE 276 F + + + A + Sbjct: 246 VFEPPLQNVEEAVFSARGLAEELVQ 270 >UniRef50_A3EWL6 Polymerase ATREV1-444 n=1 Tax=Arabidopsis thaliana RepID=A3EWL6_ARATH Length = 444 Score = 94.4 bits (234), Expect = 7e-18, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 2/98 (2%) Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVREL 229 + + + LPV + G+G + +KL I+T L ++K F E Sbjct: 332 KVEEFLDQLPVGTLPGVGSVLKEKLVKQNIQTCGQLRLISKDSLQKDFGVKTGEMLWSYS 391 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAI 267 RG + + I ++G R D + + Sbjct: 392 RGLDLRSVTAVQ-ESKSIGAEVNWGVRFRDQQDVFILV 428 >UniRef50_Q4QCF2 DNA polymerase eta, putative n=3 Tax=Leishmania RepID=Q4QCF2_LEIMA Length = 760 Score = 94.4 bits (234), Expect = 8e-18, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 29/141 (20%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D++ FYA E V D P+V+ + G +IA N A+A GV+ + + Sbjct: 17 IAHMDMDCFYAQVEAVRLGVDCRVTPLVL--SQWGSLIAVNYPARARGVRRFSNVSEAQA 74 Query: 61 LFRRCGVVCFSSNY----------------------ELYADMSNRVMSTLEELSP--RVE 96 L +V S +Y E Y S ++ S L +P +VE Sbjct: 75 LCPGL-IVALSPSYRMGEAVSQYHPHPVQDSYKLSLEPYRHASRQIFSILAA-TPGVQVE 132 Query: 97 IYSIDEAFCDLTGVRNCRDLT 117 S+DEA+ D+T Sbjct: 133 KGSVDEAYVDVTEAARRELAE 153 Score = 85.9 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 46/292 (15%), Positives = 82/292 (28%), Gaps = 62/292 (21%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + +R + H GIA + LAK + K Q+ L +R Sbjct: 240 ASRVVHRLRQRIYAELHYDCSAGIAHNRVLAKCISATHKPNQQ------TLLLPDRSASA 293 Query: 176 MSALPVDDVWGIGRRISKKLDAM--GIKTVLDLADTDIRFIRKHFN-------------- 219 + LP+ + G G ++ + A+ G+ + + +RK Sbjct: 294 LFELPLSGLRGFGGKLGAAVSAVCGGVTECREAWLVPLAQLRKLDGTCDVGDGEDAEGDR 353 Query: 220 ----------VVLE--------------------RTVRELRGEPCLQLEEFAPTKQEIIC 249 LRG + P + II Sbjct: 354 EGRKRRPIARKRGRAASASLERDLQGLVAHTTSLYVFYRLRGLAEDTIL-NRPLSKTIIA 412 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRS----EHQYCRFISTFIKTSPFALNEPYYG 305 S++FG T +R+ I + + R + + F Sbjct: 413 SKNFGRITTSVEMVRRWIIVLTSELCSRYEEFTALYQIRGRSFNIKLGNDGFRSTGGLS- 471 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGV 355 S +V L Q + A R + A+++ G + +G F S G Sbjct: 472 -SHTVALPEAMQ-PDILAAVAMREVQAVFRNKPGAAADSVTLTIGGFVSDGT 521 >UniRef50_D0LTL3 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTL3_HALO1 Length = 527 Score = 94.0 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 65/440 (14%), Positives = 139/440 (31%), Gaps = 46/440 (10%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQKD 60 A D+ AF P+ G PVV++ + G ++ + A+ + G + Sbjct: 5 ACVDLPAFPLQLLRQRHPEWAGHPVVIVDEDAPQGRILWADERARERRILPGQRYAHALS 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYS--IDEAFCDLTGVRNC-RDLT 117 L A + V L E SP +E + + D G+ R L Sbjct: 65 LAPDLHAGVIDER--EIAAGVDAVCELLREFSPEIEPCADLPGVFWLDGAGLERLFRSLR 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + R I + +R V + + T+ ++A + + + + D + + Sbjct: 123 KWARGIERALRER-GYEVALAVGFTRF----GSYAVARGRPRALSIFD--DRASEHAAAR 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 + ++ + G+ ++ + L +G+ TV + I + F R R GE L Sbjct: 176 DVALERL-GVDPQLREHLRRLGVVTVGEFLHLPAGGILERFGAEAHRIHRLAAGESWDPL 234 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + F + + + A+ ++L + ++ + Sbjct: 235 RPTPAPEP-LEECVLFDDPERNTERLLYALEGALTPLLDRLAKDRCALTRLAVELTLDDA 293 Query: 298 ---ALNEPYYGNSA------------------SVKLLTPTQDSRDIINAATRSLDAIWQA 336 G + +++ PT + + ++ +A Sbjct: 294 IQTRAQPRTRGRNRPSAHVEGRDAHDHPVRVDAIRPAEPTLELQTVMRLVRLRFEA-EPP 352 Query: 337 GHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 ++ + +G QL LF +APR + L A+ G + A Sbjct: 353 RAAVRELRLRVGAIL-ATREQLELF-AHAPRRDLRAANEALARLRAELGDHAVVKASLRE 410 Query: 397 QQ------QWQMKRAMLSPR 410 W+ R + P+ Sbjct: 411 GHLPEARYAWEPLRELRLPQ 430 >UniRef50_C7MCU6 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MCU6_BRAFD Length = 589 Score = 94.0 bits (233), Expect = 9e-18, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 77/278 (27%), Gaps = 37/278 (13%) Query: 52 GDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-V 110 G + V+ +++E + + V + ++ ++ V++ G Sbjct: 92 GMKRRAARAACP--DVLVLEADHEHDSALFELVAAAVDTIAAGVDVLRPGVLLMSARGPA 149 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 R+ I V + T VGIA A LA+ R + Sbjct: 150 RHQGGEEALAERILDAVAELTGWDCAVGIADGPFAALLAS----PPGR-------IVREG 198 Query: 171 RQRKLMSALPVDDV------WGIGRR----------------ISKKLDAMGIKTVLDLAD 208 R + ++ P+ + G G R L +GI T+ DLA Sbjct: 199 RSAEYLAPHPIAALRHAPVGPGWGHRGQPSATRPERRLDLAETVDLLQRLGITTLGDLAA 258 Query: 209 TDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAIC 268 + F + RG+ PT+ + + + Sbjct: 259 LPSAAVADRFGPDVATLHLLARGQEPAPPAAHHPTQP-LFAETTLETPLVRTDQAAFIAR 317 Query: 269 SYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 A + L C + +T E + + Sbjct: 318 PLAEQLHTMLLERGLVCTRLRIVARTESGEEMERTWRH 355 >UniRef50_Q1IJA4 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJA4_ACIBL Length = 495 Score = 93.6 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 115/387 (29%), Gaps = 50/387 (12%) Query: 10 FYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDP-----WFKQKDLF 62 F A RP+L KPV V+ V A N A +GV+ G + + Sbjct: 10 FPAQALLRLRPELRQKPVAVMEGEPPREFVCAANEFAYRMGVQRGMTRPQMEVLEAVETL 69 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFC----DLTGVRNCRDLTD 118 RR ++ SPRVE E D++G T+ Sbjct: 70 RRSRAEE--------DAARAALLECAGRFSPRVEELRF-EYTLAVGADISGTEKLLGTTE 120 Query: 119 -FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 R + + V V + A L W + G +S E ++ L + Sbjct: 121 QIVRRMCEH-AAVMGMEVSVAASCN-FDAALC------WAKAHAGTKVISPGEERKTLAA 172 Query: 178 -ALPVDDVWGIGRRISKK---LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + V D+ + G+ T+ +LA + +R GE Sbjct: 173 VPVDVLDL------TLDQSVTFSLWGVHTLGELAALPQAELIARLGQDGKRLRELACGEH 226 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 L+ + F + S+ + + +++S ++ Sbjct: 227 QHLLKPVGEPFV-LREEIEFEADVESLDSVMFVLAPMLQQLCLRVQSRALALASVTVQC- 284 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 + ++ +V+ + PT D + ++ G V + Sbjct: 285 -----GLDGGTTHTRTVRPVLPTIDHQALLK-LIHLDLIANPPGAAVVALRV-FTETNRP 337 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTL 380 AQL LF P P +L + L Sbjct: 338 SRAQLGLFSPQFPEP--MRLEVTLARL 362 >UniRef50_C0BD29 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BD29_9FIRM Length = 126 Score = 93.6 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 17/121 (14%) Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 +S I+ S F S +L + + I AA D +W G + GV Sbjct: 2 VSVEIRYSDFQ------NVSHQKQLGRASGADQVIYEAACSLFDELWN-GEPIRLLGVRT 54 Query: 348 GDFFSQG-VAQLNLFD---------DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 + QL+LFD ++L M + K G + Q Sbjct: 55 AKLVDEDEPEQLSLFDLQFEVKSEKPKKSMEKLKKLSAAMGEIRGKYGADAVIRGSVLEQ 114 Query: 398 Q 398 + Sbjct: 115 R 115 >UniRef50_A0NRW5 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRW5_9RHOB Length = 481 Score = 93.2 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 49/354 (13%), Positives = 109/354 (30%), Gaps = 33/354 (9%) Query: 42 AEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSID 101 A++ G+ G + G++ ++ + P V + + Sbjct: 38 PRAESFGLNRGMTLVHARSFCP--GLLTRPADPAADQRFLRMLARWATRYCPWVGLDGRN 95 Query: 102 EAFCDLTGVRNCRDLTD-FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 F D+TG + + +IRA + + LT +G+A T A + A Sbjct: 96 GLFLDITGSAHLLGGEEPLLDDIRARLARA-GLTARLGLADTPGTAWALSRFA------- 147 Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV 220 ++ + LP+ + + + L+ +GI TV L + + + + Sbjct: 148 ---EGIAETGETLARIGPLPLSALR-LSDQTCTSLERLGIATVSQLYNLPRATVARRYEP 203 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + R + + G Q+ + + I + A A ++L + Sbjct: 204 DVLRRLDQALGALPEQISPLGEEP-GFAVRMTLPDPIGLLDDVMAAARRLTAHLCQRLDT 262 Query: 281 EHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA---IWQAG 337 + R + + + +KL P +D I + AG Sbjct: 263 AQKGARSLKLTFRRVD------QENQAVELKLARPMRDPERI----LALFERGVSAVDAG 312 Query: 338 HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 + + + G+ QL+ + L ++ L + G + Sbjct: 313 YGIDMIRLEATEVEPLGMRQLD----RTEGLEKDGLDDLITQLGNRVGLDNILR 362 >UniRef50_D0LH57 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH57_HALO1 Length = 468 Score = 93.2 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 51/322 (15%), Positives = 98/322 (30%), Gaps = 41/322 (12%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 A + +F P L G+P+ V+ + N VIA + A G++ G + Sbjct: 3 IACVYLPSFPLQAHVRELPHLLGEPLAVVDSSLNGSTVIACSRAAWEEGIRPGMATATAR 62 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV-----------EIYSIDEAFCDLT 108 + V ++ LY + ++ L E+ V E + A + Sbjct: 63 AIVPELSVEV--ADPALYERAAAALVEGLLEICEVVDPDGELGTLGLERGGLHRA-IYVQ 119 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLAN------------HAAKKW 156 R G +I T+L R VG+A + A +A + Sbjct: 120 APPRMRG-DALGHKI-ITMLGRHGFRGRVGVADDRFTAYVAAVTVGRGGKVARIDESDTR 177 Query: 157 QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRK 216 ++ LP+ + I + L G+KT+ D A + + Sbjct: 178 PPLFHQSFTTVPRGGSASFLAPLPLSFLP-IDDEVQSMLHTCGVKTLGDFAALPPPSVSR 236 Query: 217 HFNVVLERTVRELRGEPCLQLEEFAPTKQE---IICSRSFG-----ERITDYPSMRQAIC 268 RGE + Q ++ + + +D A+ Sbjct: 237 AL--HQVDFRALARGEGSRTVRGVVRGAQLQHPVVECITLPAPASAQDESDVVGAGNALR 294 Query: 269 SYAARAAEKLRSEHQYCRFIST 290 + R A ++ + + +S Sbjct: 295 TLCDRVAHRMVARDRAVTGLSL 316 >UniRef50_UPI00019063AA putative nucleotidyltransferase protein n=2 Tax=Rhizobium etli RepID=UPI00019063AA Length = 380 Score = 92.8 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 99/311 (31%), Gaps = 31/311 (9%) Query: 13 SCETVFRPDLWGKPVVVLSN--NDGCVIARNAE-AKALGVKMGDPWFKQKDLFRRCGVVC 69 S + RP+ P +V S N+ + E AK LG+K + + ++ + Sbjct: 18 SWRSKERPE---APPIVCSAKLNNAMRLTALDEWAKRLGLKKDQGVAEARAMYP--TLEV 72 Query: 70 FSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQ 129 + + + + +P V D F D+TG + + + VL Sbjct: 73 VEEDPAADRRLLEAIADWCDRYTPLVAFDGKDGLFLDITGCTHLFGGE---KALLKDVLS 129 Query: 130 RT---HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 R + I+ + L+ W G + E +++ +LP+ + Sbjct: 130 RLFHMGIDARGAISSSPGLS---------WAVSRFGQSGVIGDEEMERVLMSLPIAALRL 180 Query: 187 IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQE 246 G + L +G+K + D+ + + + F L + + G + P Sbjct: 181 QG-QTVDALKKLGLKYIGDVINAPRAPLTRRFGPELLLRLDQALGHEEEPVSPRRPVA-S 238 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 + E I + A L + R + F ++ + Sbjct: 239 LSAESRLIEPIGTEEQILAVTRQVAVSLQPSLEARGAGGRVFELVL----FRVDGRVFRI 294 Query: 307 S--ASVKLLTP 315 S AS L P Sbjct: 295 SVGASQPLREP 305 >UniRef50_C7DDU4 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=5 Tax=Rhodobacteraceae RepID=C7DDU4_9RHOB Length = 522 Score = 92.4 bits (229), Expect = 3e-17, Method: Composition-based stats. Identities = 63/378 (16%), Positives = 116/378 (30%), Gaps = 46/378 (12%) Query: 27 VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS----- 81 + V + V A N A GV G + L V YAD+ Sbjct: 50 LAVDGAHGPVVHAANPAAIEAGVHTGARIVDMRSLIPELRV--------EYADVGGDQIL 101 Query: 82 -NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG-REIRATVLQRTHLTVGVGI 139 ++M P + D D TG + D +++A + LTV + + Sbjct: 102 LQQLMLWTRRWCPWTSLDGSDGLILDTTGSDHLHDGEALMLADMQAR-FAQLGLTVRLAV 160 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A T+ A ++ + + E + ALPV + + + L+ +G Sbjct: 161 APTRG----AAWGLARYGPERA----ICPAEDIELRLGALPVKALR-LSDKTDLLLNRLG 211 Query: 200 IKTVLDLADTDIRFIRKHFNV-----VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 +KT+ L D + + F + ++ G + + ++ +R Sbjct: 212 LKTIGALTDVPRVALVRRFARTELIHNPVMRLDQMMGRLAEPVNSPEDPPRFMVRAR-LP 270 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI-KTSPFALNEPYYGNSASVKLL 313 E + D + + +L S R I + KT + + S Sbjct: 271 EPVQDPT---PHLPALCEALCAELSSAGFGARRIVVSVYKTDGDISHVEAATATGSR--- 324 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 D ++ ++AI G+ + + Q L QL Sbjct: 325 ----DPAHLLGLFRDRIEAI-NPGYGFDLITLTAAHVEEMADVQSRLGGGTDEGTELAQL 379 Query: 374 MTVMDTLNAKEGRGTLYF 391 +D L AK G + Sbjct: 380 ---VDRLTAKFGAAHVTR 394 >UniRef50_A7VEX4 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VEX4_9CLOT Length = 127 Score = 92.1 bits (228), Expect = 4e-17, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 1/95 (1%) Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV-AQLNLFD 362 Y + +K+ T + +I A R + + GV D + Q++LFD Sbjct: 12 YSFTRQMKIDHATNITSEITEYAYRLFKENYNWSKTIRSIGVRGADLVTDKYWEQIDLFD 71 Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 D + R + +D + + G ++ + Sbjct: 72 DISRREKMMKADAAVDDIRRRFGYYSVQRGLMYMD 106 >UniRef50_C2QVF5 DNA-damage repair protein n=1 Tax=Bacillus cereus ATCC 4342 RepID=C2QVF5_BACCE Length = 198 Score = 91.7 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 10/140 (7%) Query: 72 SNYELYADMSNRVMSTLEELSPR---VEIYSIDEAFCDLTGVRNCRDLT---DFGREIRA 125 Y SN + + P + S+ F + + + F + + Sbjct: 3 PIMGTYIKCSNYITKLALQYVPIEDFINTASM--NFLWILPIASIYLPEIQMKFALQFKR 60 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + + T + +GIA ++K+A K + GV + + KL S P+ W Sbjct: 61 EIYEHTRIECTIGIAPNLLMSKVALDIEAKKNK--DGVAYWTYEDIPTKLWSIRPLSKFW 118 Query: 186 GIGRRISKKLDAMGIKTVLD 205 GI +I KL+ G+ ++ + Sbjct: 119 GISHKIETKLNQKGVHSIGE 138 Score = 69.3 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%) Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 +G Q++LFD+ R +LM VMD + K G+ ++ R L Sbjct: 138 EGEEQISLFDNIIQREKEIKLMKVMDEIRTKFGKNSILRGISYTNNATARYRNTL 192 >UniRef50_Q0G3S1 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G3S1_9RHIZ Length = 494 Score = 91.7 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 65/372 (17%), Positives = 124/372 (33%), Gaps = 26/372 (6%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 V A A+ G+ +G + + F G+ ++ + + + +P V Sbjct: 16 VTAVCEMAERQGLAVGTGLSEARARFP--GLETLMADMAADRRLLAAIADWCDRYTPLVA 73 Query: 97 IYSIDEAFCDLTGVRNCRDLTD-FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 + D++G + ++ + + L L AK Sbjct: 74 LDPPFGLILDISGCAHLFGGERGLMDDLLMRLFHQGFLAQAAIAGSAGAAIALVGVPAKP 133 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 +GG +R ++ LP+ + + S L +G+KTV L D + Sbjct: 134 AIVASGG---------ERAAVAPLPIKVLR-LDPETSGLLSRLGLKTVAALLDQPRAGLA 183 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + F L RT+ E G + P Q I R E I + + + + A+R Sbjct: 184 RRFGKSLVRTLDEATGLARRPISPRRPVPQLI-AERRLFEPIALEEDVARILFALASRLK 242 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNS--ASVKLLTPTQDSRDIINAATRSLDAI 333 L R + + F ++ S A+ + PT +R + + L Sbjct: 243 GDLEERGLGARTLELSL----FRVDGVVNRASVGAARPVREPTAVAR-LFREKLKGLGEE 297 Query: 334 WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 + AG Y + + + Q +L + L +D + A+ G T+ Sbjct: 298 FDAGFGYDLVKLAVYETDRLETIQTDLSGEVETNAAFTHL---VDRIGARLGPKTVL--A 352 Query: 394 QGIQQQWQMKRA 405 + WQ +RA Sbjct: 353 PCRRDSWQPERA 364 >UniRef50_D2LC32 Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LC32_RHOVA Length = 648 Score = 91.7 bits (227), Expect = 5e-17, Method: Composition-based stats. Identities = 57/410 (13%), Positives = 120/410 (29%), Gaps = 44/410 (10%) Query: 9 AFYASCETVFRPDLWGK--PVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQKDLFRR 64 F + + RP L + P+ +L + + A + A G+ + P + + Sbjct: 23 NFAMTLARLKRPRLAKRREPLALLEKHGTVRRIAALDGPAIEAGLYLHQPLADALAVCPK 82 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFGREI 123 +V ++ AD + + +P + D+TG + D + ++ Sbjct: 83 --LVTADADPAAEADARAALALWAQRYTPATAPAPSG-LWLDITGCAHLVGDEDELADDL 139 Query: 124 RATVLQRTHLTVGVGIAQTKTLA--------------KLANHAAKKWQRQTGGVVDLSNL 169 L+ + IA T A A + S+ Sbjct: 140 LGR-LEARGIPARAAIAPTFGAAFALAHHAERYVIAGDFAAARDAPPPLSRQATLFESDE 198 Query: 170 ERQRKLMSALP-----VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER 224 +R+ + A V+ + I + L +G+ T+ D+ + + F +L + Sbjct: 199 DRRVEAGLAALLAPLPVERLR-IAPETASVLRKLGLYTIGDVMPLPRASLARRFPDLLPQ 257 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 + G ++ + R F E + + + + +L E Sbjct: 258 L-DKALGRADEAIDFLREPTPWLERLR-FAEPLAAPEDIERVTRALLDMLCRRLERERHG 315 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA---IWQAGHRYQ 341 S F + G + + L Q R + G Sbjct: 316 GLTFEV----SFFRADGGVEGQTVTTALPCRDQ------ARVMRLFREKLPLIDPGFGID 365 Query: 342 KAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 A + Q N+ E L ++D + ++ G G +Y Sbjct: 366 SAMIFASRVEPLEARQSNILRKVQGEASLEDLAALIDGIESRFGEGRVYR 415 >UniRef50_D2Q395 Nucleotidyltransferase/DNA polymerase-like protein involved in DNA repair n=2 Tax=Nocardioidaceae RepID=D2Q395_9ACTO Length = 545 Score = 91.3 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 98/292 (33%), Gaps = 17/292 (5%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 AS E V P+ VL V+A +A A+A GV+ G + + +V Sbjct: 36 ASAEGV----PPETPLAVLQKGR--VLATSAAARAEGVRRGLRAREAQSRCPE--LVVLK 87 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 + + A + V+S LE L+P +++ G E L+ Sbjct: 88 YDPVVDARAFDPVISCLEALTPGIQVIRPGMCALKARGPSRYYGSEPAAAEKLLDRLETY 147 Query: 132 HLTVG-VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 + VGIA A+ A A V + + ++ L +D + Sbjct: 148 DVPGSRVGIADGPFAAEQAARA-----ASAQTRVRVVPPGGSAEFLAPLSIDTLER--PA 200 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 ++ L +G++++ A + F + RG+ + E+ + Sbjct: 201 LTDLLRRLGLRSLGAFARLPAAEVLARFGPDGAFAHQLARGDDDRPVV-VRQIPPELTRT 259 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 F + + AI + A +L + C + + T ++E Sbjct: 260 LDFEPPVDRVDQVAFAIRTVADELIGRLSALGLVCTTLRVEVGTESGRIHER 311 >UniRef50_Q14N04 Putative dna polymerase iv n-terminal and c-terminal truncated protein n=1 Tax=Spiroplasma citri RepID=Q14N04_SPICI Length = 95 Score = 90.9 bits (225), Expect = 7e-17, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 7/88 (7%) Query: 100 IDEAFCDLTG-VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR 158 ID+ + D+T +++ V Q+ L +GI+ K+LAK+A+ K Sbjct: 12 IDKCYIDVTDIYLKYGSAMRLALDMQQNVFQQIGLPNSIGISYNKSLAKIASDMKKPMG- 70 Query: 159 QTGGVVDLSNLERQRKLMSALPVDDVWG 186 + L E +L+ LPV+ ++G Sbjct: 71 -----ITLIRPEDVAQLVQPLPVNKIFG 93 >UniRef50_Q0UKS6 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UKS6_PHANO Length = 635 Score = 90.9 bits (225), Expect = 9e-17, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 13/122 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AFYAS P L P+ + V+ N EA+ G+ + K L Sbjct: 17 VIHFDYDAFYASVVENEFPHLKSLPLAI--QQKQIVVTCNYEARRRGLYKLQLISEAKRL 74 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDE--------AFCDLTGVR 111 V+ + + + S + + + S R E DE F D++ + Sbjct: 75 CPDV-VIVLGEDLTRFRNASKELYALVRSFSWNARCERLGFDEVRPPILSQVFMDVSDII 133 Query: 112 NC 113 + Sbjct: 134 DY 135 Score = 88.6 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 32/182 (17%) Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL----ERQRKLMSALPVDDV 184 Q T VGI+ K LAKL + K + T S+ + M + + Sbjct: 216 QEKGYTATVGISTNKLLAKLVGNRHKPNAQTTLLPPYTSDHTDISDNVTLFMDDHEIGKI 275 Query: 185 WGIGRRISKKLDAM------GIKT------------VLDLADTD---IRFIRKHFNVV-- 221 GIG +I++KL I T V D+ + + + Sbjct: 276 PGIGFKIAQKLRTHVLQRPAAIDTGLVYGGTKESVLVRDVREYPGLGPELLERLLGGNGA 335 Query: 222 ----LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 R L G ++ + +I S+ R+ + + + AA + Sbjct: 336 PHGIGARIWELLNGCDSAEVGQARQVPTQISIEDSY-IRLDTINEVTKELSMLAASLLTR 394 Query: 278 LR 279 + Sbjct: 395 MH 396 >UniRef50_A9H958 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=A9H958_GLUDA Length = 494 Score = 90.5 bits (224), Expect = 1e-16, Method: Composition-based stats. Identities = 67/390 (17%), Positives = 122/390 (31%), Gaps = 33/390 (8%) Query: 11 YASCETVFRPD--LWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCG 66 + E + R +P+V S + A +A A+A GV G P + + L G Sbjct: 11 FLPVERLRRQHGVPPDQPLVTRSHDGRRQVIAAADAAARARGVTPGQPLAQAQALVP--G 68 Query: 67 VVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRAT 126 ++ + E A ++ ++P D + D TG + + A Sbjct: 69 LLVMPAAPEQDAAALAGLVRWCLWMAPLTAPDGADGIWIDATGCAHLHGGE---SAMLAR 125 Query: 127 VLQRTH---LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 +L L+ IA T A HA + R VV + + LPV+ Sbjct: 126 LLDGLGRRGLSGRAAIADTPG----AAHALARHGRARLAVV---PPGGHQAALDPLPVEA 178 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 + I R + L +G+ + L + + F L + + G+ + Sbjct: 179 LR-IAPRTADMLHRLGLGRIGALRAAPRAPLARRFGPRLLARLDQASGQVAEPIRPVLAP 237 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 + R F E ++ S R I A LR R + + Sbjct: 238 -DAMQARRGFVEPLSTPESFRVVIDVLLADLCATLRGRGMGARRLDLICERVDGTACAVR 296 Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAI--WQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 G + D + ++ I G + +++ AQ Sbjct: 297 VGTAR------AVHDPAHLGRL---LVERIGDVDPGFGVEAMHLLVSAAERMMPAQRGT- 346 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 ++ E L + D L + G G ++ Sbjct: 347 GESGDAEREEALSALADRLANRLGPGRVFR 376 >UniRef50_B9L412 Putative uncharacterized protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L412_THERP Length = 324 Score = 89.7 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 19/207 (9%) Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ---LEEFAPTKQ 245 R+ +L A+GI T+ AD ++ +R+ F + R G+ P + Sbjct: 23 SRVQDRLRALGIVTIGQFADLPLQSLRRRFGADIVLAHRLAHGDDPTPFRGWTPLVPLR- 81 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYG 305 R+ I + ++ + S A+ L + R I + + E Sbjct: 82 ---AERALEPPIATHDALEPVLRSLCREIADGLAALAHAARSIQLEL------VEEADRT 132 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD-N 364 + +L P + + ++ A L + H + + + +Q LFD+ Sbjct: 133 VARFRRLPQPLRTTPELFAVAWSLLAGM-TVVHPIVLLRLTVEEHAPVHASQPALFDETP 191 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYF 391 A E+L + RG + Sbjct: 192 ARTAERERLWQAA----QRFARGRVVR 214 >UniRef50_B9KR94 DNA repair enzyme n=4 Tax=Rhodobacter sphaeroides RepID=B9KR94_RHOSK Length = 534 Score = 89.7 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 90/297 (30%), Gaps = 38/297 (12%) Query: 26 PVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P V+ + G +++ +AEA+ALG+ G + ++ S + A Sbjct: 30 PFAVVGDRQGAQVLVSVSAEAEALGLGPGQGLRDATAICPH--LMTASEDPASEAAFLAA 87 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + + SP V DLTG + + + LTV +A T Sbjct: 88 LRRWAGKFSPWVAEEPPAGLMIDLTGCAHLFGGEEKVLGVVEADCAGLGLTVRAAVADTP 147 Query: 144 ----TLAKLANHA--------------------------AKKWQRQTGGVVDLSNLERQR 173 LA+ A A G+ +S R Sbjct: 148 GAAWALARHAGRALQGNLNGDAIEQEAHATRSRASRRRTFAPPSGGPLGL--ISAPGALR 205 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + LPV + + + L +G++ V DL D + + F + R + + G Sbjct: 206 AALEPLPVAALR-LSEGTVQSLARLGLRRVGDLLDLPRASLARRFGQEVTRRIDQALGLE 264 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + + I + + ++L+ + + R + Sbjct: 265 PEPVSPAGAPLH-FAVRLTLPDPIGLREDVEAGLDRLLGPLCDRLKEKGRGARRVRL 320 >UniRef50_Q2W1Y7 Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W1Y7_MAGSA Length = 78 Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Query: 347 LGDFFSQGVAQLNLFDDNAPR-PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 + D +LF + LM +D LN+K G+G + + WQM+ Sbjct: 1 MLDLVRPEDIPRDLFSPTPETGEKPKALMAAVDGLNSKLGKGAVGYGLAPKGAPWQMRCD 60 Query: 406 MLSPRYTTRSSDLLRVK 422 +P YTT +L VK Sbjct: 61 NRTPSYTTSWEELPVVK 77 >UniRef50_Q1N9P2 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9P2_9SPHN Length = 538 Score = 89.4 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 72/392 (18%), Positives = 125/392 (31%), Gaps = 48/392 (12%) Query: 16 TVFRPDL----WGKPVVV----LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 V RPDL G VVV + GC+ A + A+G+ G + R + Sbjct: 28 RVARPDLWAAGEGPAVVVDMVRGAMRLGCIDA---DGLAIGLMPGMTLADARA--REPDL 82 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDFGREIRAT 126 F ++ D R+ +P ID D++G + + Sbjct: 83 RVFETDPHADQDWLERLCDGCARYTPNAAPDGIDGLMLDISGCGHLWGGDDALAADAVER 142 Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 L+R L V +A + A HA ++ + + LPV+ + G Sbjct: 143 -LERHGLRVRHALASSPE----AAHALARFPGP--------PAPDEDAAVRRLPVEAL-G 188 Query: 187 IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQE 246 + + L G++TV DLA I F + L G L + Sbjct: 189 LDPDSAVALRRAGLRTVGDLAARPAAPIAARFGEEAIDALDALLGRGHRPLAP-RRPRAA 247 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI-STFIKTSPFALNEPYYG 305 I R F E I + + AA+A ++L + R + F ++ A Sbjct: 248 IRIDRRFAEPIGSTAYALKILEDMAAQAGDRLAERGEGGRRFEAIFFRSDGLAFPLRVET 307 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR------YQKAGVMLGDFFSQGVAQLN 359 P +D+ I+ +DA+ + QL Sbjct: 308 -------SLPIRDAPAILRLMRERIDALSDPIDPGFGFDMLRLTVPQAEKLAP---TQLA 357 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 L + + + ++D L+ + GR + Sbjct: 358 L--EGGEARREDSVAALVDRLSIRAGRARIQR 387 >UniRef50_B9Q2G6 DNA polymerase iota, putative n=2 Tax=Toxoplasma gondii RepID=B9Q2G6_TOXGO Length = 1309 Score = 89.4 bits (221), Expect = 3e-16, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 10/124 (8%) Query: 99 SIDE----AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DE A+ + + T IR + LT GI+ K+LAKLA K Sbjct: 451 SRDEEQESAYLPCPCLLSLAIATHLASAIRRYIGTHMGLTSTAGISTNKSLAKLAGAFNK 510 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 ++ L + +R ++ L + + G+G + + L G++T DL + + Sbjct: 511 PSRQ------TLLLPQHRRGFLAPLALQKIPGVGSALVRLLSRAGLRTCADLLAVSLPRL 564 Query: 215 RKHF 218 Sbjct: 565 AAIL 568 Score = 71.6 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 30/118 (25%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P + GKPV V ++ N A+ ++ Sbjct: 205 VIIHVDMDCFYAQVEELLDPSIVGKPVAV--RQKQLIVTSNLVARQK-------PWQA-- 253 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD 118 S+ V+ + V+ +D+ F D T + + Sbjct: 254 -------------------ASHAVVKAMVGEELLVQRLGLDDFFIDATALVAAGGPAE 292 >UniRef50_B6K9Y1 DNA polymerase, putative n=1 Tax=Toxoplasma gondii ME49 RepID=B6K9Y1_TOXGO Length = 1613 Score = 89.0 bits (220), Expect = 3e-16, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 10/124 (8%) Query: 99 SIDE----AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DE A+ + T IR + LT GI+ K+LAKLA K Sbjct: 598 SRDEEQESAYLPCPCLLPLAIATHLASAIRRYIGTHMGLTSTAGISTNKSLAKLAGAFNK 657 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 ++ L + +R ++ L + + G+G + + L G++T DL + + Sbjct: 658 PSRQ------TLLLPQHRRGFLAPLALQKIPGVGSALVRLLSRAGLRTCADLLAVSLPRL 711 Query: 215 RKHF 218 Sbjct: 712 AAIL 715 Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 5/94 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKA--LGVKMGDPWFKQ 58 + D++ FYA E + P + GKPV V ++ N A+ V+ G + Sbjct: 205 VIIHVDMDCFYAQVEELLDPSIVGKPVAV--RQKQLIVTSNLVARQKPWQVRKGIYMPEA 262 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 VV + + Y +S++++ L+E + Sbjct: 263 LRRCPSL-VVKNGEDLDKYRRVSDQILHALQEKT 295 Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 24/119 (20%), Gaps = 12/119 (10%) Query: 206 LADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER-ITDYPSMR 264 L+ R F G+ + + + S+ R + + Sbjct: 831 LSAVSSALARPVFLASAFWLRALCLGDEAEPVVPTTTP-KSLSVEESYAARGVRTPERLV 889 Query: 265 QAICSYAARAAEK----LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 + R + Q I+ G + L D Sbjct: 890 LELKKLVERLLARHQAHATKHGQLATVFKLSIRQKD------CDGECRQMILPPAFWDP 942 >UniRef50_Q6NJ12 Putative uncharacterized protein n=1 Tax=Corynebacterium diphtheriae RepID=Q6NJ12_CORDI Length = 508 Score = 88.6 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 84/272 (30%), Gaps = 27/272 (9%) Query: 25 KPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRV 84 + V+++ V NA A+ G++ G L V+ + E + R+ Sbjct: 26 RAVMIVDQRRVMV--CNARARKAGIRRGMLVKHALAL--DENVMMVPYSPERDTRVFERI 81 Query: 85 MSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKT 144 + +++++ VEI D+ G + E V ++ + VGIA Sbjct: 82 VRDIDQVAANVEIARPGIVLIDVQGAGAFHGSEEKAAEKIMDVTSKSGMESFVGIADDIP 141 Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS------KKLDAM 198 A +A + L+ + + + P ++ + + L Sbjct: 142 TAIIAARRNA-----------VVPLDGSVRYLDSQP-TELLRVEEALECDPDTVAHLQTC 189 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 G+ T+ D+A +R I F + + S + + IT Sbjct: 190 GLTTLGDIARISLRDITTRFGPRGHHCWTIATAQTQRTMSTPTSEID-HSVSITPEDPIT 248 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 A A +L + C I Sbjct: 249 RIDEA----FFLARSLATQLHNAGLTCHRIKI 276 >UniRef50_A3LN71 DNA polymerase eta subunit n=1 Tax=Pichia stipitis RepID=A3LN71_PICST Length = 733 Score = 88.2 bits (218), Expect = 6e-16, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 24/129 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + +L D+NAF+A E + PVV + +IA + A+ G+ D K Sbjct: 45 VISLIDLNAFFAQVEQLRLGLPVETPVVCV--QWSTLIAVSYAARKFGIGRLDTLQSAKQ 102 Query: 61 LFRRC----------------------GVVCFSSNYELYADMSNRVMSTLEELSPRVEIY 98 + + Y S +++ ++ VE Sbjct: 103 KCPNLVCAHAAVFKKGESHWAYTKGLPNQATHKVSLDPYRRESRKIVKIFQQHCDLVEKA 162 Query: 99 SIDEAFCDL 107 S+DE++ DL Sbjct: 163 SVDESYLDL 171 Score = 77.8 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 92/331 (27%), Gaps = 84/331 (25%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +IR + T GIA K +AKLA K + + ++ Sbjct: 255 IVLDIRKALYDEMGYTTSAGIASNKQVAKLAGGFKKPDNQC------VIRNRSTYSFLNN 308 Query: 179 LPVDDVWGIGRRIS----KKLD---AMGIKTVLDLADTDIRFIRKHFN---VVLERTVRE 228 ++DV +G + +KL GI + + + + I + FN + ++ Sbjct: 309 FELNDVTSMGGKTGDFVLQKLRVPPDKGISYIRE--NFTLEAIEEEFNDDIPLAKKIYEI 366 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSF--GERITDYPSMRQAICSYAARAAEKLRSEH---- 282 +RG +L + ++ ++F + I +A ++ Sbjct: 367 VRGNHRRELV-NRMDVKSMMSRKNFLAKHPVETLSDADSWIKVFAGDLYNRMIELDEENL 425 Query: 283 ---------------QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ------DSRD 321 + + +S + TS S +L+ + Sbjct: 426 RLSMSQVSNKEKGVIKRPKTLSINLGTS------SGIRRSKQAQLMQYSSLDRLWEHFEQ 479 Query: 322 I-INAATRSLD---------------AIWQAGHRYQKA--------GVMLGDFFSQGVAQ 357 I L+ + +K + + +F + Sbjct: 480 IGYRILRDLLETITETAKLNGGRTLKELEAQSLDPRKIKVASISHLSLTISNFIKANDS- 538 Query: 358 LNLFD------DNAPRPGSEQLMTVMDTLNA 382 +L D + +L + D +N Sbjct: 539 -SLIDSYTGNTETDKESAQAKLKQMFDEVNK 568 >UniRef50_Q1NNX6 Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNX6_9DELT Length = 139 Score = 87.8 bits (217), Expect = 7e-16, Method: Composition-based stats. Identities = 36/52 (69%), Positives = 43/52 (82%) Query: 4 LCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPW 55 L D N+FY SCE +F P L G+PVVVLSNNDG VIAR+ EAKALG+KMG+P+ Sbjct: 23 LLDCNSFYVSCERLFDPGLEGQPVVVLSNNDGGVIARSNEAKALGLKMGEPF 74 >UniRef50_B3L3B7 Putative uncharacterized protein n=1 Tax=Plasmodium knowlesi strain H RepID=B3L3B7_PLAKH Length = 1500 Score = 87.4 bits (216), Expect = 8e-16, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 15/168 (8%) Query: 1 MFALCDVNAFY--AS----CETVFRPDLWGKP--VVVLSN-----NDGCVIARNAEAKAL 47 ++ D + ++ AS CE G + V + + V A N K Sbjct: 597 VYLYIDFDNYFLNASVKSACEQCDNNKKIGSNEILCVCHSLKKEDSYSIVSATNYWGKKN 656 Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 + G ++ ++ + + ++ S + L S V + S+DE+ L Sbjct: 657 KIHKGMVKWEVTNM-HKDNIRFVKYDFGNILRCSYLFLLVLINYSKNVRVLSVDESIVQL 715 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 N DL ++I + T+L+V +GI+ ++++ A KK Sbjct: 716 -FYENEEDLFLTAKQIAEDIYNLTNLSVSIGISSNLSMSRKALKFCKK 762 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/124 (10%), Positives = 32/124 (25%), Gaps = 9/124 (7%) Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF---------I 292 K+ I S ++G R + I + +LR + + + Sbjct: 985 EGKKSINISVNYGVRFQNINDFYFLIYFMTKQLYIRLRINSLKAKSLHVHFFLNEEGENV 1044 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + ++ + L T + + D + + ++ D S Sbjct: 1045 DPVKYLGRGKVSRVNSRINLSHYTDNFFVYFFKVIYTFDVLASRLRDLRGVQIVCSDVVS 1104 Query: 353 QGVA 356 Sbjct: 1105 ADAI 1108 >UniRef50_A8UAE9 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UAE9_9LACT Length = 149 Score = 87.4 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 53/132 (40%), Gaps = 3/132 (2%) Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 KLA A K + G+ + + + P++++WGIG+R + + +GI +V L Sbjct: 3 KLALDNAAK--KTPNGIAECHYEMVSETIWNIHPINEMWGIGQRTAANIYRLGIDSVYSL 60 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQL-EEFAPTKQEIICSRSFGERITDYPSMRQ 265 + + +++ ++ E+ G + + + P S+ D + Sbjct: 61 STNSAQSLKRTHRIIGEQLFYYAHGIDQSIIAQNYIPLSNSFSKSQILDRDYIDQYEIEV 120 Query: 266 AICSYAARAAEK 277 I A + A K Sbjct: 121 VIREMADQVAIK 132 >UniRef50_C0G3K2 Cytoplasmic protein n=39 Tax=Rhizobiales RepID=C0G3K2_9RHIZ Length = 513 Score = 87.4 bits (216), Expect = 9e-16, Method: Composition-based stats. Identities = 64/362 (17%), Positives = 114/362 (31%), Gaps = 47/362 (12%) Query: 43 EAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE 102 EA LG+ G + R V + ++ + R+ E +P V + DE Sbjct: 47 EAAKLGLFPGMALTDARARVERLDVAAAAPEHDT--ALLKRLAQWCERYTPLV---AFDE 101 Query: 103 ---AFCDLTGVRNCRDLTDFGREIRATV---LQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 D+TG + +RA +R L V IA A+L K Sbjct: 102 PHGLMLDITGCAHLFGGP---AAMRADALCRFERAGLHVQAAIADNSFAARLLARGTK-- 156 Query: 157 QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRK 216 GGV + +L+ LP+ + + + L G+K + D+ + Sbjct: 157 ----GGVF---SQAEADRLLPRLPLSAL-ELAQAAETGLKRAGLKRIGDVMALPRSALTA 208 Query: 217 HFNVVLERTVRELRGEPCLQLEEFA--PTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 F L + L + P + R E +T + + A Sbjct: 209 RFGTDLATRLDRLARRERAPISPLRILPLR---TVERRLSEPVTAMELVEHILRELAQAL 265 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 +L E + ++ S F ++ ++ P +D R + A L A+ Sbjct: 266 FAQLEMEGKGA----LLLEASFFRVDGEVRHI--RIETGQPLRDDRIFLRLARERLGALT 319 Query: 335 QAGHR------YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 + A + + Q L G QL +D L+A+ G+ Sbjct: 320 DPLDAGFGFDMIRLAALRSS---TVAQRQTGLDQHEEDEAGFSQL---IDRLSARLGQDR 373 Query: 389 LY 390 + Sbjct: 374 VL 375 >UniRef50_C1D2K9 Putative Y-family DNA polymerase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D2K9_DEIDV Length = 423 Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats. Identities = 59/350 (16%), Positives = 108/350 (30%), Gaps = 48/350 (13%) Query: 16 TVFRPDLWGKPVVV----LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 P G PV V S V+ + A+ GVK+G Sbjct: 23 QRRHP---GVPVAVLSEEGSGGGRRVLHVSPGARDAGVKVGMRDTAALSRCPELHAETM- 78 Query: 72 SNYELYADMSNRVMS-TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 N L A N ++ S RVE + F L+ D ++ Sbjct: 79 -NAPLAAAAWNELLEQMYVRYSDRVEGRTPGLIFLKLS----LGAARDLAAALQ------ 127 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE-RQRKLMSALPVDDV--WGI 187 VG+A + +A LA AK G V ++ E ++ ++ +P++ + G+ Sbjct: 128 ----APVGLAGSLEVAHLAALRAK-----AGEVREVHPGEQAEQAFLNLVPLEHLQVLGL 178 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQE 246 +++L +G+ + DL V + + R L+G QL + P + Sbjct: 179 SPAQAERLRFLGVTGLADLCKWSAAQREAFLGVDMGTQVNRFLKGHRTEQLPRYVPGQ-- 236 Query: 247 IICSRSFGER--ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 I S + + A LR + +++ + Sbjct: 237 -ILEASLDTDAPLLNSLEADAAFQELLPGLMTGLR--GRTAAYLTV-------RCDTLGG 286 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 +A+ KL P ++ A +L+ + V Sbjct: 287 SLTATRKLKWPLDSGG-LMRVAGLALEDTGALAIGIDRLSVQFSGLQQPS 335 >UniRef50_Q67N70 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67N70_SYMTH Length = 539 Score = 86.7 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 83/238 (34%), Gaps = 7/238 (2%) Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 + + + + ++ LPV + + + ++L +GI + + A + + + Sbjct: 295 IVSPGAEARFLAPLPVTFLP-LPPEVQRRLQQLGITRIGEAARVSEDEWARQLGLQGRQI 353 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 R RG ++ P ++ + RS + D + + + AA A +L + C Sbjct: 354 SRWSRGIDPEPVKPAWPPRR--LARRSELGGVRDRDPLERELSRSAALLAAQLDRRGEGC 411 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 + + ++ + + P Q + + T+ LD + + Sbjct: 412 QQVGLILELADGRVLHAERTLPRLRHTAYPIQ--QGLHALLTQLLDGL-RESVEVAAVTA 468 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 +G Q+ L+DD R E++ + L+ + + W+ + Sbjct: 469 EVGLIGPVDWRQMELWDDRLLRERRERIEGALSLLHQRFPARVIGLG-MHTPTSWREQ 525 >UniRef50_C4Y9R5 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y9R5_CLAL4 Length = 748 Score = 86.3 bits (213), Expect = 2e-15, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 42/128 (32%), Gaps = 24/128 (18%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 L D+NAF+A CE + PVV +IA + A+ G+ D ++ Sbjct: 44 IGLIDLNAFFAQCEQIRLGKTIDDPVVCC--QWQSLIAVSYAARKYGIGRMDSLQSAREK 101 Query: 62 FRR----CGVVCFSSN------------------YELYADMSNRVMSTLEELSPRVEIYS 99 V + Y S +++ L+ VE S Sbjct: 102 CPGLIVGHAAVFRKGEAHWQYLDKLPDQSLHKVSLDPYRRESRKIIKVLKRECDLVEKAS 161 Query: 100 IDEAFCDL 107 +DE + D Sbjct: 162 VDECYLDF 169 Score = 64.7 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 23/178 (12%), Positives = 54/178 (30%), Gaps = 22/178 (12%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + + R + T G+ +KT+AKLA K + + Sbjct: 266 ASQLLYKARCAIYSELKYTTSGGVGNSKTVAKLAGGFIKPD------FQTVVPPRSAKAF 319 Query: 176 MSALPVDDVWGIGRRISKK-LDAM-------GIKTVLDLADTDIRFIRKHFNV---VLER 224 S + D +G + + L + I+ + + + + I F + + Sbjct: 320 FSHFHLSDFTMMGGKTGELVLQKLSVPPDCNSIEYIRE--NWPLDRIEAQFPSEPQLARK 377 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSF--GERITDYPSMRQAICSYAARAAEKLRS 280 +RG +L+ + ++ ++F + I + +L Sbjct: 378 VYELVRGIHHQELK-LRTDVKSMMSRKNFTAKNPVNTLSDAFDWIKVFVGDLYGRLVE 434 >UniRef50_B2AJW9 Putative DNA polymerase, Y family n=8 Tax=Burkholderiaceae RepID=B2AJW9_CUPTR Length = 488 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 65/380 (17%), Positives = 116/380 (30%), Gaps = 28/380 (7%) Query: 16 TVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 VFRP + V + V A A GVK G + + + F + Sbjct: 16 EVFRPTWSTTELAVAVLDKERVHLATPLALAAGVKPGMRRGGVQTIAPAA--ILFDRDAG 73 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEA--FCDLTGVRNCRDLTDFGREIRATVL---QR 130 D RV + SP V DEA D++ R++R ++ Q Sbjct: 74 KEEDALARVTMATLQFSPNVAAA--DEAAVLIDVSTTLRLFGGP---RKLRRRIMGTVQT 128 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 + VG A T A L TGG L+ QR+ M+ LP+ + R+ Sbjct: 129 MGFSTMVGSAPTAQGAWLLAR--------TGGGTALTTASLQRR-MAGLPIHALP-AARK 178 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 + + +G T+ DL +++ + GE ++ E+ + Sbjct: 179 FADWFEGLGCLTLEDLRRLPRAGLQRRCGADFLDALDRAYGEAP-EIFEWVEAPPAFDAT 237 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 +RI + + + L + H + ++ P + Sbjct: 238 VDLPDRIENAEQTLAYVRGLLVQMVGWLTARHLAIKRFHVALRHERGRAAIPPTTIE--I 295 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 L P +I L + V D +LF + Sbjct: 296 ALAEPNWHEEHLIRILKERLALVVVEAPMI-AVAVSAIDTEPMAPPTESLFPEPGGTHAD 354 Query: 371 EQLMTVMDTLNAKEGRGTLY 390 +++ L+A+ G + Sbjct: 355 HA--RLLELLSARLGADRVR 372 >UniRef50_C6XYX1 Cytosolic protein n=4 Tax=Sphingobacteriales RepID=C6XYX1_PEDHD Length = 500 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 61/387 (15%), Positives = 123/387 (31%), Gaps = 40/387 (10%) Query: 16 TVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 + +P+L G P V + + G + A EA+ G+ +G K + VV Sbjct: 19 ALRKPELKGVPFVFATPDHGRMVITATTIEAELQGINVGMVAADAKAIVPSLQVVDDIPG 78 Query: 74 YELYADMSNRVMSTLEE----LSPRVEIYSIDEAFCDLTGVRNCRD-----LTDFGREIR 124 +L +++S L E +P V + D D++G + L + +R Sbjct: 79 KDL------KLLSLLGEWCIRYTPFVTVDLPDGLILDISGCTHLWGDERSYLKEVVTRLR 132 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 + V +A T A K V + Q + + +LP + + Sbjct: 133 SK-----GFDVRGAMADTVGTAWAIARFGK--------VKPIIEPGEQAEALLSLPPEAL 179 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK 244 + RI+++L +G++ + +R+ F L + + G L+ P + Sbjct: 180 R-LDNRITERLQKLGLRNIRSFIHMQRSALRRRFGQQLLLRLDQALGNEQELLQPLQPIE 238 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 E I + AI +L+ + + R L + Sbjct: 239 A-YSERLPCLEPIRTAIGIEIAIKQLLEMLCLRLKQDGKGLRTAILKCYRIDGELEQVSI 297 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 G S + T + A + + + Q L+ + Sbjct: 298 GTS------SATYHISHLFK-LFELKIATITPALGIELFVMEASKTEDVPLVQEGLWAGS 350 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYF 391 + + ++D L K G ++ Sbjct: 351 LGLE-ARAVTELIDRLAGKVGANAIHR 376 >UniRef50_A7F9S4 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7F9S4_SCLS1 Length = 594 Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 31/302 (10%), Positives = 78/302 (25%), Gaps = 65/302 (21%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG--VVDLSNLE----RQ 172 + +R ++ + T VGI+ K L+KL + K + T L N + Sbjct: 183 LAQYLRLSLEEEKGYTSTVGISTNKLLSKLVGNLHKPKGQTTLLPPYEVLPNDDGLQSNA 242 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAM---------------------GIKTVLDLADTDI 211 + + + + GIG ++S+++ ++ V A Sbjct: 243 TTFIDSHDIGKIPGIGFKMSQRIRNHVLSRPADFESGLIYGGTKESVAVRDVRLFAGMGP 302 Query: 212 RFIRKHFNVVLE------RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + K + + G +++ +I S+ ++ + P + + Sbjct: 303 DTLEKILGGSGAERGIGGKAWGLINGGDDTDVKDARKVPSQISIEDSY-IKLDNMPRLME 361 Query: 266 AICSYAARAAEKLRSEHQ---------------YCRFISTFIK-----TSPFALNEPYYG 305 + ++ + Y + I + + + Sbjct: 362 ELRMLTTSLLNRMYQDLLEDDEESHVPSKRWIAYPKTIRLSTRPRLPLNADGTRTRSFNR 421 Query: 306 NSASVKLLT-------PTQD--SRDIINAATRSLDAIWQAGHR--YQKAGVMLGDFFSQG 354 S S L R I + + + + + Sbjct: 422 ISRSGPLPNLVFNLKDGIDSIVERLIRDTLIPMFRKLHPQRSDWNLSLVNIGVTNMVEAA 481 Query: 355 VA 356 Sbjct: 482 SE 483 Score = 64.7 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SP 93 ++ N EA+ G+ + K + V+ + D S + LE+ S Sbjct: 31 IIVTCNYEARLRGLSKLQLISEAKKICPDV-VIVLGEELGRFRDASKMLYKHLEKFSWSG 89 Query: 94 RVEIYSIDEAFCDLTGVRNC 113 +VE DE F D+T + + Sbjct: 90 KVERLGFDEVFMDVTDIVDY 109 >UniRef50_B8C8E2 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C8E2_THAPS Length = 1538 Score = 85.9 bits (212), Expect = 3e-15, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 89/268 (33%), Gaps = 26/268 (9%) Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +R V Q+ T+ GI+ +K +AKL K + + K+M Sbjct: 333 ANVRRVVFQKLGFTLSAGISTSKLVAKLGATYGKPNGQA------VIYPVAIPKVMDETQ 386 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLAD--TDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + +G ++ KK+ +M I D+ D + RG +++ Sbjct: 387 IRKARMLGGKLGKKVGSMNI-DADDVIRSYIDKSISFAVGDESGRWVFDACRGICLEEVK 445 Query: 239 EFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR----SEHQYCRFISTFIK 293 + I +S YP + + + A+ ++++ H+ + + Sbjct: 446 PTLNVLPKSITAFKSLRGSAGSYPELDKWVALLASDIMKRVQLDTSRNHRVPKSCTL--G 503 Query: 294 TSPFALNEPYYGNSASVKLLTPTQ---DSRD--IINAATRSLDAIWQAGHRYQKAGVMLG 348 + + S +L PT D+R +++ A R L + + + G Sbjct: 504 YA--TKEDGNNWIGKSHRLTFPTDKDFDTRVQKLVDNARRVL--LDSGHDSFSRIGFSAI 559 Query: 349 DFFSQGVAQ-LNLFDDNAPRPGSEQLMT 375 DF ++ + F S + Sbjct: 560 DFVTRATKGIYSFFSVGKIESSSARREK 587 Score = 64.7 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + L D++ FYA CE V P+V++ +A N A+ G+K GD + + Sbjct: 19 VILLLDMDCFYAQCEVVRLGLERDIPLVLV--QWNSALAVNYPARKFGIKRGDSFQVAIE 76 Query: 61 L 61 Sbjct: 77 K 77 >UniRef50_A4XTN1 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=33 Tax=Gammaproteobacteria RepID=A4XTN1_PSEMY Length = 473 Score = 85.5 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 72/402 (17%), Positives = 133/402 (33%), Gaps = 51/402 (12%) Query: 26 PVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA-DMSN 82 P+V+L + A N A+ALG+K G + L R S++Y+L A + Sbjct: 28 PLVLLGGPPQRRVLQAVNPAARALGLKPGQLLSAAQALTRG----FASADYDLAAIERWQ 83 Query: 83 RVMSTLE-ELSPRVEIYSIDEAFCDLTGVRNCRDL-TDFGREIRATVLQRTHLTVGVGIA 140 + ++ S +V ++ ++ F +R L + +A Sbjct: 84 QFLAAWAYGFSAQVSLHYPRCLLLEVGSSLGLFGPWPHFEARLRRE-LGELGFQQRITLA 142 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 A++ + + + + R + LPVD + G+ R + L MG+ Sbjct: 143 PNPVAARMLANVH--------DGLAIGDAAELRAALERLPVDRI-GLSRETASALTRMGL 193 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 +++ L + + F L R + L GE L L+ + P + F RI Sbjct: 194 RSLQQLLALPRDGLARRFPAELLRHLDSLLGERALALDFYRPPDR-------FDTRIELN 246 Query: 261 PSMRQA------ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 + + A A L + + + + + V LL+ Sbjct: 247 FEVESHQALLFPLRRLTADLAAYLAGRDSGVQRFTLHL------EHRNPPASQLVVGLLS 300 Query: 315 PTQDSRDIINAATRSLDAIWQAG--HRYQKAGVMLGDFFSQGVAQLNLFDD-NAPRPGSE 371 +D ++ L+ + + L F Q LFD+ E Sbjct: 301 AERDPAMLLELTRGRLEQLQLPAPVLALRLEARELPAFAPQHRQ---LFDERPQQSLPWE 357 Query: 372 QLMTVMDTLNAKEGRGTLY----FAGQGIQQQWQMKRAMLSP 409 QL L A+ G + A +Q WQ + +P Sbjct: 358 QLRE---RLRARLGDEAVQGLGVRADHRPEQSWQAESDRRTP 396 >UniRef50_A5K6H4 Putative uncharacterized protein n=1 Tax=Plasmodium vivax RepID=A5K6H4_PLAVI Length = 1619 Score = 85.1 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%) Query: 1 MFALCDVNAFY--ASCETVFRPDLWGKP------VVVLSN-----NDGCVIARNAEAKAL 47 ++ D + ++ AS + P K + V + + G + A N K Sbjct: 630 VYLYIDFDNYFLNASVKGASEPYGKSKKIDNHEILCVCHSLKKEESYGIISATNYWGKKN 689 Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 + G + + R + ++ S + L S V + S+DE+ L Sbjct: 690 KILKGMVKGEVTKMHRD-NIRFVKYDFSNILRCSYLFLLVLINYSKNVRVLSVDESILQL 748 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 ++ ++I + T+L+V +GI+ ++++ A KK Sbjct: 749 -FYETEEEIFSAAKQIAEDIYTLTNLSVSIGISSNLSMSRKALKFCKK 795 Score = 45.4 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 37/126 (29%), Gaps = 9/126 (7%) Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF------- 291 + K+ I S ++G R I + +LR + + + Sbjct: 1052 DRIEGKKSINISVNYGVRFEYINDFYFLIYFMTKQLYIRLRIKKLKAKCLHVHFFLKEEN 1111 Query: 292 --IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 + + + S+ +KL T + S DA+ + + ++ D Sbjct: 1112 ENVNPVKYLGRGKVFRVSSRIKLSHYTDNFFVYFFKVIYSFDALASSLSDLRGVQMVCSD 1171 Query: 350 FFSQGV 355 S Sbjct: 1172 VVSTDA 1177 >UniRef50_A9FIX7 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FIX7_SORC5 Length = 621 Score = 85.1 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 100/369 (27%), Gaps = 57/369 (15%) Query: 43 EAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV------- 95 EA+ GV+ G + L + + RV L Sbjct: 68 EARRYGVRPGQKVVEAAALV--AHLAIHRVTFAEIDAALGRVAEVALGLGATAAIQLGEQ 125 Query: 96 -------------------EIYSI------DEAFCDLTGVRNCRDLTD-FGREIRATVLQ 129 E S D + D+TG + + E+ V Sbjct: 126 GAPRAGAARASRAPERAASEARSPWGDGPYDTVWLDITGASHLVGGEEALLGELGERV-A 184 Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR 189 + IA LA+ G ++ + + + LPV + + R Sbjct: 185 ALGHRARLAIADGPRLAQALARFGAHADGGGGAEAPIAPPGKGAQAIGPLPVQALP-VER 243 Query: 190 RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 ++ L +G+ V DLA + + L G + L F + + Sbjct: 244 EVASFLVRLGVLRVEDLARLPRAQVAARLGPRTADVMELLAGRDPVPLLPFEVPR-LLEE 302 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP------------- 296 F E I S+ + +R A +L + + C ++ I Sbjct: 303 EVLFDEPIESAESLLFVLRGMTSRIASRLAARGEACGRLNVAIAYDRSIARLRLGEREDD 362 Query: 297 -----FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + V + P D+ D++ L+ I A V+ Sbjct: 363 GAAALLEDDGRGPSLRFHVDMPVPLSDAGDLLRPLKARLERIELAAPAV-GVHVIASRIA 421 Query: 352 SQGVAQLNL 360 QL+L Sbjct: 422 RARRVQLDL 430 >UniRef50_B9DP45 Truncated ImpB/MucB/SamB family protein (Fragment 2) n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DP45_STACT Length = 124 Score = 85.1 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 39/101 (38%) Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 G L PT ++I + D + + Y+ + L F +G+ QLNL Sbjct: 12 RDGGGVHKQFTLQEPTNLDKEIWEMVEKWADKLCEKDMLYRTLSISLTQFVPEGIQQLNL 71 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 F D R SE L +D L K G+G + A + Sbjct: 72 FVDEYERKRSEALAKTIDQLQQKYGKGIVSKAVSYTDAGTK 112 >UniRef50_A5FTH4 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=31 Tax=Alphaproteobacteria RepID=A5FTH4_ACICJ Length = 522 Score = 85.1 bits (210), Expect = 5e-15, Method: Composition-based stats. Identities = 61/379 (16%), Positives = 124/379 (32%), Gaps = 42/379 (11%) Query: 25 KPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSN 82 P+++ N V A N A+ LG+++G + + L G+ + Sbjct: 45 TPLILADRDGNRRIVFAANGVAQDLGLRIGMAVAQAQALIP--GLTIRDAEPLADVAGLE 102 Query: 83 RV-MSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTV------ 135 R+ + L +P V D D TG + R + +R + + V Sbjct: 103 RLALWALHRYAPIVAADPPDGLVIDATGAAHLRGGE--AQMLRDMIARLAAAGVTARAAM 160 Query: 136 --GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 G A LA+ + V ++ ++ R ++ LP+ + + + Sbjct: 161 ADSWGAAH--ALARFLAN-----------PVFVALADQSRDILLTLPIAALR-LPTEMIT 206 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 L +G + + DLAD + F L R + + G +E I ++F Sbjct: 207 GLRRLGFERIGDLADQPRAPLALRFGPQLHRRLDQALGTLAEAIEAARSP-DLIEVRQNF 265 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 E I ++ + L ++ R + + + V Sbjct: 266 AEPIGAAETIARYTGILVTELCTMLEAKGLGARQLDLVFHRVD------AHSEAIRVGTA 319 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL-NLFDDNAPRPGSEQ 372 P ++++ + ++ I G + + G QL +L D Sbjct: 320 LPARNAKRLTRLLCDKIETI-DPGFGIEIMALCAARSEPFGPKQLTSLLADEP----ETD 374 Query: 373 LMTVMDTLNAKEGRGTLYF 391 + ++DT+ + G LY Sbjct: 375 ISDLIDTIANRVGGDRLYR 393 >UniRef50_D1BHX8 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHX8_SANKS Length = 553 Score = 84.7 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 53/388 (13%), Positives = 102/388 (26%), Gaps = 56/388 (14%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 +P V V+A +A A+A GV+ G ++ + + Sbjct: 50 PAQQPAAVHDGRR--VVASSAPARAQGVRRGMRLRTAQECCPELEL--LPVDDARDTRDF 105 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDFGREIRATVLQRTHLTVGVGIA 140 V +E L +EI G + R + TV +RT VG+A Sbjct: 106 EPVAVAVETLVAGLEIARPGLLLLPALGATRYHGSEEELARRLVETVAERTGHECQVGVA 165 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG----RRISKK-L 195 L + R+ ++A P+D + + L Sbjct: 166 DGIL-----------ASLLAARTALLLPPGQTREFLAAHPLDALLHAATSPDAVTETREL 214 Query: 196 ----DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 +G++T+ DL+ + F R RG I Sbjct: 215 VHLWTRLGLRTLADLSALAEADVHTRFGERGRWAHRMARGADLRPPARRRLEPD-IGVET 273 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 + + + S A + C + T E S + + Sbjct: 274 ALDPPVERVDTAAFVARSLAEDLYALVLERSVTCSRLRISAHT------ESGLALSRTWR 327 Query: 312 LLTPTQD-------SRDIINAATRSLDAIWQAGHRYQK-----------AGVMLGDFFSQ 353 T D + I + L+ W + + + + Sbjct: 328 ----TDDGALGGLSAARITDRVRWQLEG-WLSATGVRGEGDPEPSPLVRLAITAEGVVAA 382 Query: 354 GVAQLNLFDDNAPRP-GSEQLMTVMDTL 380 G Q L+ + + ++ + + Sbjct: 383 GAQQGRLWGAASGDELRARRVTERVQGI 410 >UniRef50_Q55931 UmuC protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55931_SYNY3 Length = 116 Score = 84.7 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 44/80 (55%), Positives = 59/80 (73%), Gaps = 3/80 (3%) Query: 45 KALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAF 104 KALGVKMG P+FK DL +R + FSSNY LY D+S+R+M++L+ SP VEIYSIDEAF Sbjct: 33 KALGVKMGVPFFKIPDLVKRHNIQVFSSNYCLYGDLSHRIMTSLQLFSPVVEIYSIDEAF 92 Query: 105 CDLTGVRNCRDLTDFGREIR 124 +LT ++ T++G EI+ Sbjct: 93 LELTPNQSN---TNYGEEIQ 109 >UniRef50_Q4QCF3 DNA polymerase eta, putative n=3 Tax=Leishmania RepID=Q4QCF3_LEIMA Length = 786 Score = 84.0 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 80/283 (28%), Gaps = 66/283 (23%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + +R + H GIA + LAK + K Q+ L +R Sbjct: 260 ASRVVHRLRQRIYAELHYDCSAGIAHNRVLAKCISATHKPNQQ------TLLLPDRSASA 313 Query: 176 MSALPVDDVWGIGRRISKKLDAM--GIKTVLDLADTDIRFIRKHFN-------------- 219 + LP+ + G G ++ + A+ G+ + + +RK Sbjct: 314 LFELPLSGLRGFGGKLGAAVSAVCGGVTECREAWLVPLAQLRKLDGTCDAGDGEDAEGDR 373 Query: 220 -------------------------------VVLERTVRELRGEPCLQLEEFAPTKQEII 248 LRG + + A + + Sbjct: 374 EGHVDEASAACRGDTKVDNGGGGEDGMVAQSRTGVYAFYRLRGLGSDTVADPALPR-GMK 432 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRS----EHQYCRFISTFIK--TSPFALNEP 302 S+ F + + + + + A +L H+ R + ++ +P Sbjct: 433 ASKIFHPACSSWSAAQLWMAPLAGELWHRLSEYESCYHKEGRSLVLVLRAYVTPEQARRG 492 Query: 303 YYGNSASVKLLTPTQ--DSRDI----INAATRSLDAIWQAGHR 339 + S ++ PT D+ +I + + + + G Sbjct: 493 QHTRSYRAQVPLPTNVRDASEIAGMGLREFVKLMREVTTRGKE 535 Score = 74.3 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 44/140 (31%), Gaps = 26/140 (18%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKM--------- 51 A D++ FYA E V D P ++ G IA N A+A GV+ Sbjct: 36 IAHMDMDCFYAQVEAVRLGVDCRVTPFALV--QWGSFIAVNYPARARGVRRFCLSPDEVR 93 Query: 52 ------GDP------WFKQKDLFRRCGVV-CFSSNYELYADMSNRVMSTLEELSPRVE-I 97 + + + + + E Y S ++ + L V Sbjct: 94 RELPDVRMSHIATYAMGESEYCYPEAPHINTHKVSLEPYRHASRQIFAILRAEPGVVVGK 153 Query: 98 YSIDEAFCDLTGVRNCRDLT 117 IDEA+ D+T Sbjct: 154 AGIDEAYVDVTEAARRELAE 173 >UniRef50_Q1YPI9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPI9_9GAMM Length = 444 Score = 83.2 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 62/362 (17%), Positives = 118/362 (32%), Gaps = 36/362 (9%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 V+ + AK G++ L ++ E ++ SP V Sbjct: 3 VLCCSESAKQSGIEPQLSLSTALALCPE--LLTLQRQPEREKTRLQQLALIAYSFSPVVI 60 Query: 97 IYSIDE--AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 IDE + +L+G + T L V +GIA + A+L Sbjct: 61 ---IDEKGLWLELSGCEKLFHSYRQLLQQLQTKLLHHCTDVAMGIAGSAYAARLLC---- 113 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 Q G +L + ++ + + +R + +G+ + DL + Sbjct: 114 ----QPGFRCELPQSIELEQQFRRTSLNLLR-VTKRQQQSFQQLGLTYLDDLLALPRAEL 168 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA------IC 268 F + ++ L GE QL+ F P +F + + + + Sbjct: 169 ASRFGTAIVEQLQLLLGEKPCQLKLFNPPA-------TFHDLLQSPQGILSKQGLLFPMK 221 Query: 269 SYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 + R + L++ YCR I F + S + L +++ + Sbjct: 222 ALLQRLSIYLQARQCYCRKIE-----WRFEPLIGDHS-SMCITLSGSQNSWSTLLDLSRL 275 Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 LD I G + + DF L+LF D + + ++D+L+A+ G Sbjct: 276 QLDRINLPG-SIETIILSTDDFAEGLPEGLDLFGDTSAGEERLETNRLIDSLSARLGPEA 334 Query: 389 LY 390 L Sbjct: 335 LQ 336 >UniRef50_A5DV91 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DV91_LODEL Length = 731 Score = 83.2 bits (205), Expect = 2e-14, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 24/129 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D+NAFYA E V PV V +IA + A+ G+ D K Sbjct: 46 VIALVDLNAFYAQVECVRLGLSDEDPV-VC-QQWQSIIAVSYAARKYGISRLDTVHSAKL 103 Query: 61 LFRRCGVVCF------------------SSNY----ELYADMSNRVMSTLEELSPRVEIY 98 ++ + Y S +++ ++ V+ Sbjct: 104 KCPHLICAHAGVYKKGDSHWAYYPGSPSPVDHKVSLDTYRRESRKILRIVQSKFDLVDKA 163 Query: 99 SIDEAFCDL 107 S+DE++ DL Sbjct: 164 SVDESYVDL 172 Score = 80.9 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 88/290 (30%), Gaps = 55/290 (18%) Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 R T+ + T G+A+ + +AKL+ K + L+ + + + D Sbjct: 261 RRTIYEELGYTTSAGLARNRLVAKLSGDFKKPDNQTIVRNCALN------RFLQNFELTD 314 Query: 184 VWGIGRRISKKL--------DAMGIKTVLDLADTD--IRFIRKHFNVVLERTVRELRGEP 233 + G G ++ K L + I + D +R + + +RG Sbjct: 315 ITGFGAQLGKSLIVKFQCPSNTNSIAFIRDNYTQSMMREELRDD-PELANKLYLIVRGLY 373 Query: 234 CLQLEEFAPTKQEIICSRSFGERI-TDYPSMRQAICSYAARAAEKL-------------- 278 L+L + ++ +++F + + + YA + +L Sbjct: 374 PLELTSKVDV-KSMMSTKNFRDNSPWCLKDAYEWLTVYAGDLSNRLLDLDNESMDLSLTK 432 Query: 279 ---RSEHQ--YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS---RDIINAATRSL 330 R R I+ ++++ F + + + S + I+ + L Sbjct: 433 ISKRDRGVLKRPRTITIGVRSTAF------VRQTRQMPIPIHKDISKMKQTILECGCQLL 486 Query: 331 DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + + + G LF + ++ + + Sbjct: 487 REYMEHNTDLTRL--------NNGKTPKELFAGDPKNVKIMKMQNMSLAI 528 >UniRef50_C5B9L5 DNA polymerase IV n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5B9L5_EDWI9 Length = 154 Score = 82.8 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 42/135 (31%), Gaps = 30/135 (22%) Query: 7 VNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCG 66 ++ F+A E G PV + GV+ P + L+R Sbjct: 19 MDCFFAEVEI------RGFPV-----------------RRDGVRSAMPTAQVLKLWR--- 52 Query: 67 VVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTDFGREIRA 125 + +S + SP V+ S+DE + D++ + +I A Sbjct: 53 -TLRPGRMVVCKGVSGEIHRIFHRYSPWVDPLSLDETYLDVSDCPLHQGSAMLMTWQICA 111 Query: 126 TVLQRTHLTVGVGIA 140 + + G+ Sbjct: 112 DITAKR--PCSHGVG 124 >UniRef50_UPI0001BC9B94 impB/mucB/samB family protein n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC9B94 Length = 143 Score = 82.4 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 52/160 (32%) Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 +++A+ +Y ARAAEKLR++ C+ + ++T F +E Y N ++L T D+ Sbjct: 34 IKEAVATYTARAAEKLRAQGSVCKKMRLSVRTGMFNPDEAKYANGVVIELPYATNDT--- 90 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 +LM+VMD++N+ Sbjct: 91 -------------------------------------------------RLMSVMDSINS 101 Query: 383 KEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 + GRGTL A + +R ++S YTTR +L K Sbjct: 102 RWGRGTLRTATVPTTPECAKRRDLMSQSYTTRVDELWIAK 141 >UniRef50_Q2Y7D7 DNA polymerase V n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y7D7_NITMU Length = 79 Score = 82.4 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 36/76 (47%) Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 ML + Q +L ++ S++LM MD LN + GR T+ + W M R Sbjct: 1 MLMGINDAQIIQESLLHEHGAGERSQRLMKAMDALNLRYGRNTVSVFTPASPKSWAMGRE 60 Query: 406 MLSPRYTTRSSDLLRV 421 +SP YTTR SD+ Sbjct: 61 AMSPCYTTRWSDVPVA 76 >UniRef50_Q5CPV1 DinB/family X-type DNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II RepID=Q5CPV1_CRYPV Length = 358 Score = 82.4 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 27/137 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + +L D++AF+A V KP+ V++NN V+A N ++ GV + Sbjct: 36 IISLIDMDAFFAQVCHVEYNIPRDKPLAVINNN--VVLAVNYPSREKGVNRKMSKEEILS 93 Query: 61 LFRRCGV---VCFSSN--------------------YELYADMSNRVMSTLEELSP--RV 95 + + V + +++ S V + L+ P Sbjct: 94 ICPEIIIPQNVFLDARGQYLELFNDDNLNMTYQKLSLDIFRKASKMVFTKLKSYLPTCNA 153 Query: 96 EIYSIDEAFCDLTGVRN 112 +I SIDE + DLT + Sbjct: 154 QIASIDEIYFDLTNIIQ 170 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 8/87 (9%) Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 R + + T T GI K +K+ + K + + + + Sbjct: 278 RKRLQEETTYTCSSGIFINKIYSKMISSLKKPNGQ------TVLLHRWFESYIKDTHILK 331 Query: 184 VWGIGRRISKKLDAM--GIKTVLDLAD 208 + +G ++ K L I+++ DL + Sbjct: 332 LRFLGGKLGKCLIEKFPEIQSIKDLQN 358 >UniRef50_B4S261 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S261_ALTMD Length = 484 Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 64/368 (17%), Positives = 113/368 (30%), Gaps = 30/368 (8%) Query: 25 KPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRV 84 PV V S+ +I N AK G+++G + L V N E M ++ Sbjct: 45 TPVAVYSSKASKIIQCNEVAKKEGIEIGHGLAQAAALCPY--VHILPFNEENEKHMLTQL 102 Query: 85 MSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKT 144 L L+ + + + D L + + + + L ++ A T Sbjct: 103 AHRLYPLASDIVLDAPDGLAIRLDNLSHYYGGHEALWKTLTQALFEANVRYHFASAWTIE 162 Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK----LDAMGI 200 AK+ K L + ++ + A P+ ++ K L +GI Sbjct: 163 AAKVLV-LHKHN-------TYLHAQQEIKQALGACPLST-----TALASKVIESLTRVGI 209 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 V +L ++ + K F+ + LRGE ++ F P + I + Sbjct: 210 TRVHELLAMPVQELGKRFDNNTIVYLTALRGEIFPRVTLFRPLEH-FDNFTLLPFDIENT 268 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSR 320 + + + LR+ + Y IS I F N S + Sbjct: 269 QHLTPFVTQQFEHLSHYLRARNLYTSSISVHIH---FREAPVLDINIRSALPQASVKSWL 325 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + + GV F + F D +QL + L Sbjct: 326 PLFT----LKTENLELPEPATAIGVRCQQFEEIDSNNGDFFSDRFNDVAQKQL---IGRL 378 Query: 381 NAKEGRGT 388 NAK G + Sbjct: 379 NAKLGDHS 386 >UniRef50_UPI0001AEC5B6 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC5B6 Length = 495 Score = 82.0 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 57/371 (15%), Positives = 109/371 (29%), Gaps = 28/371 (7%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA--DMS 81 PV V + + N AK G+++G + L ++ FS E + ++ Sbjct: 45 NTPVAVYCSKTNKITQCNDIAKKEGIEIGHGLAQAAALCPYVHILPFSEEAEKHMLTQLA 104 Query: 82 NRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGI 139 +R+ ++ + S L + + + L + Sbjct: 105 HRLYPLASDIVLDNHIHSNSFSGLAVRLDNLTHYYGGHKPLWKTLTQALAEADIRYHFAS 164 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS--ALPVDDVWGIGRRISKKLDA 197 A T AK+ K L + +K +S L + + ++ L Sbjct: 165 AWTIEAAKV-LALHKFN-------THLHTPDDIKKALSTCPLSITALS---PKVIDSLAR 213 Query: 198 MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 +G+ V L ++ + + F+ + LRGE ++ F P + I Sbjct: 214 VGVSCVQQLLAMPVQELGRRFDNNTIMYLTALRGETFPRVTLFRPLEH-FDNFILLPFDI 272 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + + + + LR+ + Y IS I F N S + Q Sbjct: 273 ENTQHLTPFVTQQFEHLSHYLRARNLYTSSISVHIH---FREAPVMDINIRSALPQSSVQ 329 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVM 377 + + F + F D +QL + Sbjct: 330 SWLPLF----SLKTENLVLPEPATAIALTCQQFEEMDTQNGDFFSDRFNDIAQKQL---I 382 Query: 378 DTLNAKEGRGT 388 LNAK G + Sbjct: 383 GRLNAKLGDNS 393 >UniRef50_A3ZPQ4 Putative uncharacterized protein n=2 Tax=Planctomycetaceae RepID=A3ZPQ4_9PLAN Length = 511 Score = 82.0 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 111/363 (30%), Gaps = 34/363 (9%) Query: 40 RNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS-NYELYADMSNRVMSTLEELSPRV--E 96 N A++ GV+ G P + + L R ++ E ++ E S + E Sbjct: 50 CNRTARSRGVRSGMPISEVRSLARPRDLLQSEPWRAEDDKLALQQIALRCERFSFCIGLE 109 Query: 97 IYSIDEAFC-DLTGVRNCRDLTD-FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 E D+TG+ + ++ ++ +R L + +A T +A H Sbjct: 110 DAEPPECLLLDVTGIAHFFGDEQTLAEQLGQSLAKR-RLDGRIAVADTVGIAWAGAHFLA 168 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + K + LP++ + + KL +G+ T+ + D + Sbjct: 169 HAGQPAVI--------ASGKRLEVLPIEALR-LPEATLHKLHRLGVTTIGQVLALDRASL 219 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 K L + + G+ + P + + E IT + Q R Sbjct: 220 AKRCGKSLLMRLDQWSGQLPEMITPCRPLPK-FQVDQRLEEGITQPAPLEQLWQLLLKRL 278 Query: 275 A-----EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 +L C E S++L D R + Sbjct: 279 LGLLTPRRLGVRQLLC-----------LVNMENRQTWETSLRLCEAVADERRLGELLRLK 327 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 L+ + + + + AQ + + + QL ++D L+ + G + Sbjct: 328 LEKLRLTAPLVR-MTLDASEVAPLSAAQQDWLAGRSQDE-ARQLAKLVDRLSCRLGDQAI 385 Query: 390 YFA 392 A Sbjct: 386 GVA 388 >UniRef50_A5V5C0 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=4 Tax=Alphaproteobacteria RepID=A5V5C0_SPHWW Length = 515 Score = 82.0 bits (202), Expect = 4e-14, Method: Composition-based stats. Identities = 70/379 (18%), Positives = 124/379 (32%), Gaps = 34/379 (8%) Query: 19 RPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYEL 76 P ++ G C+ A + A ALG+ G + G + Sbjct: 32 NGCPPDAPFALVEKRKGAICLAAVDRAALALGMVPGLSLADARARLPDLG--VADHDPPA 89 Query: 77 YADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVG 136 A R+ + +P V + D D++G + R+ A L R L V Sbjct: 90 DARFLERIADGCDRYTPMVALDPPDGLLLDISGCAHLFGGEGALRDDLAARLGRLGLEVL 149 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI-GRRISKKL 195 +A T A HA +++ + + ALPV+ + G+ G L Sbjct: 150 SALADTPD----AAHALARYRPEPVAGAT----------LGALPVEAL-GLDGEETVG-L 193 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 G + + DL R + F +R + G +++ P ++ R F E Sbjct: 194 RRAGFRRLDDLEARPSRLLAARFGEAAPDRLRRIAGGRDVRITPRRPEPA-LMLERRFAE 252 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 I AI +AA ++ + H+ R + F + L P Sbjct: 253 PIGRTEGALAAIGELVGQAAVRMEAAHRGGRRFEAQL----FRTDGLVRALRIETGL--P 306 Query: 316 TQDSRD---IINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 +D+R + + +L G + + + F QL L + Q Sbjct: 307 VRDARVVMRLFDERLAALADPVDPGFGFDLVRLSVPMFEPLAPLQLPLEGGALAQGELAQ 366 Query: 373 LMTVMDTLNAKEGRGTLYF 391 L +D L+ + GR + Sbjct: 367 L---LDRLSTRLGRHRVRR 382 >UniRef50_C7R3Y5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3Y5_JONDD Length = 549 Score = 81.7 bits (201), Expect = 5e-14, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 72/264 (27%), Gaps = 35/264 (13%) Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIY-------SI 100 GV+ ++ + ++ A R+ L+ + + I Sbjct: 40 GVRTTMALRHAQETLPTLTCLPTPPT-DILAREHERIAQVLDSFLAHLTVLRPGLTLAPI 98 Query: 101 DEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 D A +R+ D F + + T + GIA A LA Sbjct: 99 DGA------LRHYPDPPTFLAAVTDAITDTTGIDPWAGIANGTLPAILAARRG------- 145 Query: 161 GGVVDLSNLERQRKLMSALPVDDV------WGIGRRISKKL---DAMGIKTVLDLADTDI 211 + + + P+ + ++ L +G+ T DLA Sbjct: 146 ----RILTPDESLPFIQTHPLHTLRYTTTAPTPDPELTDLLALWAKLGLHTYADLASLPP 201 Query: 212 RFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYA 271 I F G + + I S +F E + + A Sbjct: 202 TDIATRFGARGMWAYHIAIGREEPLVSQDRNEPD-ITVSSTFDEPLHRADTAAFYAKQLA 260 Query: 272 ARAAEKLRSEHQYCRFISTFIKTS 295 ++ E+L + + +T+ Sbjct: 261 SQLREQLVKQGLSAYELRVSARTN 284 >UniRef50_C5T314 UMUC-like DNA-repair protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T314_ACIDE Length = 72 Score = 81.3 bits (200), Expect = 7e-14, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG---IQQQWQMKRAMLSPRYTT 413 Q L ++ +LM +D LN + G+GT++ G + W MK+ +P+YTT Sbjct: 3 QGELDLEDEDHRDRTRLMVALDALNQRYGKGTVHSGATGGTNRGKDWGMKQERRTPQYTT 62 Query: 414 RSSDLLRVK 422 R D+ + Sbjct: 63 RWEDVPVAR 71 >UniRef50_B9WB35 DNA polymerase eta, putative n=3 Tax=Candida RepID=B9WB35_CANDC Length = 642 Score = 80.9 bits (199), Expect = 8e-14, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 24/129 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D+NAF+A E + R +L + VV + VIA + + G+ D K Sbjct: 48 VIALIDLNAFFAQVEQI-RLNLTDQDPVVCA-QWNSVIAVSYACRKFGITRMDSIASCKS 105 Query: 61 LFRRCGVVCF----------------------SSNYELYADMSNRVMSTLEELSPRVEIY 98 + + + Y S +++ + + E Sbjct: 106 KCPNVIIAHAAVYKKGESHWAYIEGLPTINNHKVSLDPYRRESRKILRIISKSFDLTEKA 165 Query: 99 SIDEAFCDL 107 S+DE + DL Sbjct: 166 SVDECYIDL 174 Score = 73.6 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 27/257 (10%), Positives = 78/257 (30%), Gaps = 43/257 (16%) Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + E+R + T G+A+TK +AKLA K + + + Sbjct: 254 SQILLEVRKDIFAELGYTTSAGLARTKQVAKLAAGFKKPDAQ------TIIRNSAINSFL 307 Query: 177 SALPVDDVWGIGRRISK-KLDAMG----IKTVLDLA-DTDIRFIRKHF-NVVLERTVREL 229 + + DV G+G ++ + ++ + I ++ + + I I++ + + Sbjct: 308 TNFELTDVTGMGGKLGESIINKINVPPQINSISFIRENFSIDSIKEKLGGELGLKVYNIC 367 Query: 230 RGEPCLQLEEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKLRSEH------ 282 RG ++L+ + + +++F + + + +A +L Sbjct: 368 RGTNAIELQSLIEV-KSMTSTKNFTSFSVNNLFDAYDWLKVFAGDLHNRLIDLDNENIEL 426 Query: 283 -------------QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS---RDIINAA 326 + + ++ + L++ + +++ Sbjct: 427 SSTELSNKSKGIMKRPKTLTLGV------LSQNGTRQTRQMQIPIHKDLDKMKDIFFENG 480 Query: 327 TRSLDAIWQAGHRYQKA 343 L + Sbjct: 481 CVLLREFLEFNTHVSLL 497 >UniRef50_D0XS46 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=3 Tax=Alphaproteobacteria RepID=D0XS46_9CAUL Length = 476 Score = 80.9 bits (199), Expect = 9e-14, Method: Composition-based stats. Identities = 59/374 (15%), Positives = 114/374 (30%), Gaps = 37/374 (9%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + A + A LG+ G + + + + E A + RV+ +P + Sbjct: 11 LAAVDPAAARLGLSPGMTLADARARTP--DLRTVADDPEADATLLRRVLKDFGRFTPLIA 68 Query: 97 IYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAK 154 + D+TG + D IR+ + T L++ +A T A+ Sbjct: 69 LDPPHGLMLDITGCAHLFG--DEAGLIRSAQRRATGGGLSLRWALADTPQSARALARFG- 125 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 G R + L V + + + L G+K + DL D + Sbjct: 126 PGGLFAGP--------ETRTAVRRLSVAAL-ELAEPDERALRRAGLKRLSDLDDRPRAPM 176 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 F + + G+ +++ P + R E I + + A A Sbjct: 177 AARFGTDFPARLARVLGDEDVRITPHRPVPACV-VDRILVEPIVTQDDVERVFQDLLADA 235 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 ++L Q R F + S++ P++D + L A+ Sbjct: 236 VDQLDQRGQGGRAFEVFFYRLDGHVRRV------SIRTGQPSRDPAALQRLFRERLGALA 289 Query: 335 QAGHRYQKAGVMLGDF-----FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 G Q ++ RPG+E + ++D L A+ G + Sbjct: 290 HPLDP--GFGFDQMRLAVPWTEPIAPTQDSM---EGERPGTEHVSHLIDRLAARLGPDAV 344 Query: 390 Y----FAGQGIQQQ 399 F ++ Sbjct: 345 LCFQPFGSHMPERA 358 >UniRef50_B5J622 Putative uncharacterized protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J622_9RHOB Length = 70 Score = 80.5 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 35/57 (61%) Query: 366 PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 +P S LM+ +D N + G+ TL FA +G++Q WQ++ S RYTTR DL V+ Sbjct: 5 EKPKSAALMSALDQANDRFGKKTLVFASEGMKQPWQLRSNHRSSRYTTRLVDLPVVR 61 >UniRef50_A1BA10 Putative uncharacterized protein n=6 Tax=Rhodobacteraceae RepID=A1BA10_PARDP Length = 506 Score = 80.1 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 118/385 (30%), Gaps = 38/385 (9%) Query: 16 TVFRPDLWGKPVVVL-SNNDGCVI-ARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 P+ + G VI A N A+ G ++G + + + + Sbjct: 25 RRGDAWPEDIPLALAAPGPHGPVIHAANRAAERAGARIGTRAVDSRAICPALHIE--PAE 82 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG-REIRATVLQRTH 132 E A R+ P D D TG + EI+A R Sbjct: 83 PERDAARLARLAFWARRWGPYSTPDGDDGIILDTTGAAHLFGGEAAMLAEIQAG-FARAG 141 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 LT + +A T+ A A ++ + D ++ LPV + G Sbjct: 142 LTARLALAPTRG----AAWALARFGPERAICTDPLPA------LAPLPVAGLRLSGE-TL 190 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVV------LERTVRELRGEPCLQLEEFAPTKQE 246 L +G+KT+ DLA + + F L R + G L+ P E Sbjct: 191 LLLRRLGLKTIGDLAAIPRLSLMRRFARAEPQDNPLVRL-DQALGRAAEPLDAPEPAP-E 248 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 E + D + A ++ + + CR + + F ++ Sbjct: 249 FAAEARLAEPVMDPSD---WLPGLLADLCAQMAAADRGCRRLCLSV----FRVDGERRDI 301 Query: 307 SASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 V + PT+D ++ L+ + G+ + + AQ L Sbjct: 302 --RVAMAAPTRDPGHLLRLFDGRLERL-DPGYGFDLIRLAAEAVEPLAQAQPGLDGAAPT 358 Query: 367 RPGSEQLMTVMDTLNAKEGRGTLYF 391 +L +D L A+ G T+ Sbjct: 359 GLALARL---VDRLAARFGAQTISR 380 >UniRef50_B1VF25 Putative DNA polymerase involved in DNA repair n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VF25_CORU7 Length = 556 Score = 79.3 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 81/266 (30%), Gaps = 21/266 (7%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 V A NA A+A GV+ G ++ A + +++ L +++ VE Sbjct: 56 VQACNAAARAQGVRQGMKQRHALATCPELRH--APADPVQEAAIHEDIVAALMDVAAGVE 113 Query: 97 IYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 + N E+ R + G A A A Sbjct: 114 TLRPGLVALPTRPLANYYGGEAAAVELLLDSAARLGVECLAGTADDLMPAVWAARR---- 169 Query: 157 QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK------KLDAMGIKTVLDLADTD 210 GV R + LP+ + + +S L +G++++ D A Sbjct: 170 -----GVHV--PPGRNSSFVPTLPIGFL-AVEAVLSAPAELVSTLQELGVRSLRDFAALG 221 Query: 211 IRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 + + F R GEP ++ P + + E I + Sbjct: 222 RKHVAGRFGAEAVYWHRVACGEPGREVSPQRPAQP-VEVLHQVEEPIRSTETAAFVARQA 280 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSP 296 AAR +L + C ++ + +P Sbjct: 281 AARLHGELFRRGEACLRLTVRVHLNP 306 >UniRef50_Q6F8Z6 Fragment of component of DNA polymerase V (UmuC) (Part 1) pseudogene n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F8Z6_ACIAD Length = 115 Score = 79.0 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 2/114 (1%) Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPG 369 + L T + +I A L I+++GH Y+KA + L D + +LF ++ R Sbjct: 1 MHLKDYTDNLLEINQAVQSGLKIIFKSGHIYKKARITLLDIIPKHHYAPDLFVNSDQRVK 60 Query: 370 SEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ--WQMKRAMLSPRYTTRSSDLLRV 421 +++L+ + +N G+ + A Q W+M + SP Y +S LLRV Sbjct: 61 NQKLLDTLIKINTNHGKNRIVLASLIHHQPRCWEMNQLYKSPSYLMQSKALLRV 114 >UniRef50_Q8I347 Putative uncharacterized protein n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8I347_PLAF7 Length = 1697 Score = 79.0 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 59/167 (35%), Gaps = 15/167 (8%) Query: 1 MFALCDVNAFYASCETV-------FRPDLWGKPVVVLSN-----NDGCVIARNAEAKALG 48 ++ D + ++ + + + + V + + G + + N K Sbjct: 666 VYLYIDFDNYFLNASIRNKICMYEKKKSMNNEIFCVCHSLKKEDSYGIISSTNYWGKKNK 725 Query: 49 VKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT 108 + G + + + ++ S + L S V + S+DE+ L Sbjct: 726 ILKGMVKGEATKM--NKNINFVKYDFSNILKCSYLFLLVLINYSKNVRVLSVDESILQL- 782 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 D+ ++I + + T+L+V +GI+ + ++ A KK Sbjct: 783 FYEKEEDIFIISKKISDDIYRLTNLSVSIGISHDLSTSRKALKFCKK 829 Score = 48.5 bits (115), Expect = 5e-04, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 39/126 (30%), Gaps = 9/126 (7%) Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST--FIKTSP 296 E K+ I S ++G R I + +L+ ++ + + FIK Sbjct: 1075 ENNDEKKSINISVNYGVRFNKINDFYYLIYFMTKQLYLRLKIKNLKAKLLHVNFFIKAEN 1134 Query: 297 FALNEPYY-------GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 +N Y S+ +KL T + D + + ++ D Sbjct: 1135 ENVNPMKYLGRGRVIRISSKIKLNQHTNCFFVYFFKVIHTFDFLANNLSDLRGVQIICSD 1194 Query: 350 FFSQGV 355 ++ Sbjct: 1195 TINENK 1200 >UniRef50_Q4UFQ5 Putative uncharacterized protein n=2 Tax=Theileria RepID=Q4UFQ5_THEAN Length = 667 Score = 79.0 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 35/247 (14%), Positives = 86/247 (34%), Gaps = 45/247 (18%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P V N G +++ N E G+K G D+ + +V +++ + R++ Sbjct: 111 PAAV--YNHGRILSVNNECLNRGIKKGMYVETSLDICKDMKLV--KYDWDKVNERGLRII 166 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVR-----------NCRDLTDFGREIRATVLQRTHLT 134 L++ + R+ +E + ++ ++ + +I V Sbjct: 167 RLLKKYTDRILSPQYNEFYLQISYTECRNLLETVCSNTDENICNLAIQISREVP---GDP 223 Query: 135 VGVGIAQTKTLAKLANHAA---KKWQRQTGGVVDLSNLERQR------------------ 173 V +GI + ++KLA+ K +++ DLS + Sbjct: 224 V-IGIGKNMLVSKLASKRCRNLKINSQESEYDYDLSPVLCITSIYGGCYMVSDKICIVTD 282 Query: 174 --KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF-IRKHFNVVLERT-VREL 229 + ++ + + ++ G+G +S+ L + G+ T D+ ++ + + Sbjct: 283 GFRFLNNVYLSEIPGVGY-LSQVLKSKGLVTCNDVRKIGTPLCLQSVLGGRIGKLVYNFC 341 Query: 230 RGEPCLQ 236 G Sbjct: 342 FGYDYRC 348 >UniRef50_O31841 DNA repair protein homolog yozK n=173 Tax=Bacillales RepID=YOZK_BACSU Length = 115 Score = 78.6 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 14/109 (12%) Query: 2 FALCDVNAFYASCETV---FRPDLWGKPVVVLSNND---GCVIARNAEAKA-LGVKMGDP 54 D+ +FYAS V P + V+ N D V+A + K G+K G Sbjct: 12 ILCVDMKSFYASVSAVAMGLNP--LTCYLAVVGNTDRQGSVVLAASPALKKDFGIKTGSR 69 Query: 55 WFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSID 101 F+ + + + +L+ +S + P V YSID Sbjct: 70 LFEIPE---DPRIYIVNPQMKLFIRVSTEITKLFYRFVPEKCVHTYSID 115 >UniRef50_C8NM76 Polymerase involved in DNA repair n=15 Tax=Corynebacterium RepID=C8NM76_COREF Length = 796 Score = 78.2 bits (192), Expect = 6e-13, Method: Composition-based stats. Identities = 42/308 (13%), Positives = 91/308 (29%), Gaps = 42/308 (13%) Query: 17 VFRPDLWGKPVVVLSNNDGCVIARNAEAKALGV-------KMGDPWFKQKDLFRRCGVVC 69 P P+ + ++ +A G+ + G + + + V+ Sbjct: 33 RDDPAPADDPLAIAEHHRI---------RACGLAARRRGVRRGMKVRQARAVCPDLEVI- 82 Query: 70 FSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQ 129 ++ E A M V+++L E++ VE+ + ++ Sbjct: 83 -DADPERDARMFEGVIASLGEVASSVEVLRPGLVIIAADAAARYHGSEEVAAQLLIDAAS 141 Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV----- 184 RT + + G+A T A +A + ++ P+ + Sbjct: 142 RTGVDIIAGVADEVTTAVIAT---------RVVGGGVVRSGASTSFLAQQPLGVLVAEEA 192 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL---RGEPCLQLEEFA 241 G ++ + L +GI T+ +LA + + F R G + A Sbjct: 193 LGCDGQVVQALQDLGITTLGELAALPVGSVATRFGQAGLRCHAIATARHGRRVAPPIDGA 252 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 + I E IT + + A + +L C+ + T+ F Sbjct: 253 NWEVSHISE----EPITRVDAAAFRARALAVQLHARLAEAGVVCQVLRV---TADFTDGT 305 Query: 302 PYYGNSAS 309 + Sbjct: 306 TSSRVWRT 313 >UniRef50_A0Z5A6 Aspartate decarboxylase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z5A6_9GAMM Length = 479 Score = 77.8 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 62/379 (16%), Positives = 127/379 (33%), Gaps = 47/379 (12%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P VV+ VIA N EA+ G+K G + L + D S V+ Sbjct: 24 PAVVIERQR--VIAVNDEAQLTGLKPGQSTATVRALVDTSQLQLLE------RDASQEVL 75 Query: 86 ST------LEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFGREIRATVLQRTHLTVGVG 138 + ++P +E + + ++ LT I++ + QR TV G Sbjct: 76 ALERLECWAYSITPTLERWQNEGLQLEVGRCLKLYGGLTKLFNNIQSDLEQR-GFTVRSG 134 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS------ 192 +A ++ A L +H + + R+ + +P+ + R+ Sbjct: 135 LAPNRSAAWLLSHW--------DENFLYPSDQNLRQRLDEIPLHLL----RKAQAGQFLN 182 Query: 193 --KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 K L+ GI+T+ ++ + + + ++ + ++ ++F P + C Sbjct: 183 AIKSLEKTGIQTLGEILNMPASALGRRCGQAFQKWLGDVTATSDNVTQDFHPPHRFYDC- 241 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 FG I + + + A R+ I L + V Sbjct: 242 LWFGFEIRNQTELHPTMQQLLHALARFCRTTQHQPTHI------EWQMLRMHGDTDLFEV 295 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 + D + SL+ + G + + + F +Q +LF + Sbjct: 296 RSSEAHDDPEIWFELSRLSLEQ-YSLGADIEGLALHVHQFQTQNAIVTDLFGE---SHNR 351 Query: 371 EQLMTVMDTLNAKEGRGTL 389 E L ++D L ++ G + Sbjct: 352 EPLHNLVDRLRSRLGLQAI 370 >UniRef50_C7Q6R5 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q6R5_CATAD Length = 535 Score = 77.8 bits (191), Expect = 7e-13, Method: Composition-based stats. Identities = 57/374 (15%), Positives = 97/374 (25%), Gaps = 56/374 (14%) Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 GV+ G + L + E A V++ L + +PR E+ A L Sbjct: 51 GVRRGQRTRDAQRLAPGLALHARDEAAE--ARAFEPVLAVLADFTPRYEVVRPGLAALPL 108 Query: 108 TGVRNCRDLTDFG-REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL 166 G D R IR V + + GVG+A A LA + + Sbjct: 109 EGPARYFGGEDLVVRAIRDRVGEA-GIGAGVGVADGVFAASLAARSDTQVVPGRTAEFLA 167 Query: 167 SNLERQRKL------MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV 220 S L +S L G++T+ LA+ + F Sbjct: 168 SFPTSVLDLPELVDPLSRL-------------------GVRTLGRLAELPADAMTGRFGA 208 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 R RG + F + A + A L Sbjct: 209 AGVAAHRLARGLDAQPPAPLRQGPD-LAVEAVFDPPADGSERIVFAAKALADELHAVLAQ 267 Query: 281 EHQYCRFISTFIKTS--PFALNEPYYGNSASVKLLTPTQDSRDI------INAATRSLDA 332 ++ I + P A E Y LL+ T + + A ++ Sbjct: 268 AGVAGVRVAVEIHGAAGPGAEPEVSYRLWRHEGLLSSTAVAERVRWQLSGWQTALQADHQ 327 Query: 333 IWQAGHR---------------YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVM 377 + + ++ Q L+ N +++ Sbjct: 328 NPDNQNPDTPGVSPETPTADQGITRLRLIPDHLVPARGVQPGLWGANEAP---DRIARAA 384 Query: 378 DTLNAKEGRGTLYF 391 + L A G + Sbjct: 385 ERLQAMYGPNAVTL 398 >UniRef50_Q93QE1 Orf5 n=6 Tax=Streptococcus RepID=Q93QE1_STRPN Length = 143 Score = 77.4 bits (190), Expect = 9e-13, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 5/125 (4%) Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 +S I S + + + + P + + + T + + +G ++ Sbjct: 11 VLTTVVSIHIGYSRTEMKKSINAQNK----IEPANLPKTMGESCTCIIPKKYTSG-AVRQ 65 Query: 343 AGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 GV F + L+LFDD +L T +D + + G + + + Sbjct: 66 IGVSYSGFVDESYTLLSLFDDVEQIEKDNRLQTAIDVVREQFGFLAIQKGTVLTEGSRNI 125 Query: 403 KRAML 407 +R+ L Sbjct: 126 ERSKL 130 >UniRef50_Q6A779 Nucleotidyltransferase/DNA polymerase involved in DNA repair (UmuC) n=3 Tax=Propionibacterium acnes RepID=Q6A779_PROAC Length = 530 Score = 77.4 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 65/407 (15%), Positives = 112/407 (27%), Gaps = 70/407 (17%) Query: 17 VFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYEL 76 P P+++ + G VI A A GV G + V Sbjct: 28 RLHPG--DAPLMIA--DRGVVIDCCARAAEEGVIPGLRVRAAQLRCPEG--VVVP----- 76 Query: 77 YADMSNRVM------STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 Y S V+ + ++P V + A GV E VL Sbjct: 77 YDSASEEVLFDEVVREIEKSVAPSVHVVRPGVAAVAARGVARFYGDEVAAAERMVNVLTH 136 Query: 131 THLT-VGVGIAQTKTLAKLA----NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + VGV +A A++A + K+ R ++ V + Sbjct: 137 IGYSHVGVSVADGLFAAEVAATDNSGEGKRAPVFLASGTS-------RAFLAPYDVSVLA 189 Query: 186 GIGRR---ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 GR + + L +G+ T+ AD D + + + F +R RG L P Sbjct: 190 RTGRADGELVRTLRQLGLTTMGAFADLDRQHVVQRFAGAGQRAHDWARGMDVTMLSSRRP 249 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT-------- 294 + F + + + +L + C + ++ Sbjct: 250 QDDD-AMEVVFDDPEPSGAQVVAKVRPVVEEFMTRLAETGRVCSQVRILLRATTGFSEHT 308 Query: 295 ----SPFALNEPYYGNSASVK-LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 F+ ++ S + L T + D Q+ GV Sbjct: 309 WRQPWQFSGDDLLARLSRQLSDLPRGTDEFGA---------DEFCQS-------GVQAVR 352 Query: 350 FFS----QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 G A LF E L+ V+ L + G + Sbjct: 353 IVPTIHRAGEAAEGLFGARPT----EHLVHVISQLQERLGPEGVLVG 395 >UniRef50_Q47EP4 Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EP4_DECAR Length = 479 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 55/385 (14%), Positives = 107/385 (27%), Gaps = 38/385 (9%) Query: 22 LWGKPVVVLSNNDGCV--IARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYAD 79 L P V+S V +A A+ GV G L + G++ F + Sbjct: 18 LRQSPSAVVSRGRVLVGDLA----ARLAGVCAGQKLSTALGL--QPGLMVFERDEVREIK 71 Query: 80 MSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQ---RTHLTVG 136 + +P + + S D ++ I VL + Sbjct: 72 ALESLACWAGRFTPTISVVSPDVLLLEIGSCLRLFGG---APAIIEAVLAGCAEQSYSTN 128 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP--VDDVWGIGRRISKK 194 A T A + + ++ LP +D+ G + + Sbjct: 129 WAAAPTPLGASWLAR--------NACAGIHIEISAMQAALADLPCAIDEWPG---EVIDR 177 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 L++ G+K + DL +R+ + G+ + FA + Sbjct: 178 LESFGLKRLGDLRQLPGAGLRRRIGNQPMDDLLRAWGDLPDPQKPFAFPE-SFAIDLELP 236 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 R+ ++ A A A L R + + S Sbjct: 237 ARVEHAEALAFAGQRLFAALAGWLHGRQLLLRCCTLHLAHDDGEKTPLALRFS------E 290 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 P D + L + Q + + + + A +LF+ A G+ + Sbjct: 291 PAADEGRFMRLLREHLARL-QLKAPVEALCLQADELLDKPGASAHLFEQAATGEGA---L 346 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQQ 399 ++ L A+ G G + + Sbjct: 347 ACLERLRARLGEGAVQALSLMADHR 371 >UniRef50_A0YAE9 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAE9_9GAMM Length = 481 Score = 76.6 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 62/363 (17%), Positives = 115/363 (31%), Gaps = 29/363 (7%) Query: 33 NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 V+ N A G+K G L V N E ++ V S Sbjct: 18 ERQIVLQANPPAVEKGIKNGHSMATALSLHPELQAVERQINREK--ELLEHVAVWAYRFS 75 Query: 93 PRVEIYSIDE----AFCDLTGVRNC-RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 P+V SIDE F ++ G R + + +R L G++ + Sbjct: 76 PQV---SIDEQLSAVFLEIRGSLKLFRGFNRLFHYLSEGIKKR-KLHFYCGLSHNPIASY 131 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK-LDAMGIKTVLDL 206 L +++ K + ++ + ++ALPV + R+ KK L +MG+ + + Sbjct: 132 LISYSDK-DPEYYRQSPTKLDSKKILQNLNALPVALLPC--RKSVKKNLQSMGLTHIHSV 188 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + K F + L+ E F P + SR F + + + Sbjct: 189 FSLPKTSLGKRFGREFFDLIAYLKNEEKEHRSLFVPPEH-FNSSRYFLNGLNNKQQLHPY 247 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 I LR R ++ + + +S V R + + Sbjct: 248 INQLLTELKNHLRFRQLINRQLNWQLNYIDGGSDSLRLNSSLQV-FQQ-----RSLFDIT 301 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD------NAPRPGSEQLMTVMDTL 380 L+ + + + + +F G +LF +E+ VMD L Sbjct: 302 LLKLEQM-KLRANIESLSLSCKEFEKIGSYNDSLFQQHDNELLAEDDSKNEKYNVVMDKL 360 Query: 381 NAK 383 ++ Sbjct: 361 LSR 363 >UniRef50_A4AKV5 Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AKV5_9ACTN Length = 494 Score = 76.6 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 83/269 (30%), Gaps = 9/269 (3%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P V+ G V A +A A+A G+ G + + F G++ + + L + Sbjct: 2 DVPFVL--TEKGLVFAASASARAEGISRGLRLREAQSRFP--GLIDRAYDPALDSRAFEP 57 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR-EIRATVLQRTHLTVGVGIAQT 142 V++ +EEL P V++ + G + V + VG+A Sbjct: 58 VIAGIEELIPGVQLLRPGMCAVRVRGAAQYYGGEKAAALTVIDRVNEIVASDARVGVADA 117 Query: 143 KTLAKLANHAAK-KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK 201 A A+ + Q + + ++ L + + +I L +GI Sbjct: 118 LFTAVHASRSTVGVDQVSRSARARIIPAGESAQFLAPLAISVLDE--PQIVTLLIKLGIS 175 Query: 202 TVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 T+ + A +R F + R G P + F + Sbjct: 176 TLGEFAQLAHADVRTRFGDLGARLHALASGRDPQAFIARTPPLD-LDVVIDFEPALDRVD 234 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + S A E L I Sbjct: 235 QITFGVRSRADDFIEGLVRAQLVVTAIRI 263 >UniRef50_C8WVC3 DNA repair nucleotidyltransferase/DNA polymerase-like protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WVC3_ALIAD Length = 402 Score = 76.3 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 58/360 (16%), Positives = 105/360 (29%), Gaps = 38/360 (10%) Query: 40 RNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYS 99 + A GV+ G P + L C V S + + L +P VE + Sbjct: 31 ASRTAARAGVRPGIPVREALALVPGCHVESASGE----STSWRHLRQVLWSHTPWVETH- 85 Query: 100 IDE--AFCDLTGVR-NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA---- 152 DE + +L+G R +L R+IR + + V + +A+T A++ Sbjct: 86 PDERRFWIELSGPRVPLAELRQMARDIRLGLTEEQ--RVVLALAKTPWQARMLLAWSRQE 143 Query: 153 ------AKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 +K + V P+ W I +L ++G+ + DL Sbjct: 144 RVPGALYRKLGTEPLVVAPDLLNRDAEAFWIRAPIAASWWIPDDAKAELLSLGVFRLKDL 203 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD--YPSMR 264 A+ + F R R G L P + S S+ + Sbjct: 204 AEIPEDVLCARFGEQ-ARIWRM-NGMGKTSLRPDRPPE---AWSASWRGDAEGVPLEQAK 258 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 + L + +S AL ++ PT + Sbjct: 259 MRVRLCLENLCGHLARFGLAVQTLSI-------ALWAEAREIRWQKRIAKPTPRPDALW- 310 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV--MDTLNA 382 A + R + + Q++L + E + ++ LNA Sbjct: 311 -AQMAWPEEVHRAQRIWSVELCATEVAQLRPVQVSLLEQGEALDALEARDSANRLERLNA 369 >UniRef50_A6GCV2 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCV2_9DELT Length = 537 Score = 75.5 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 64/393 (16%), Positives = 127/393 (32%), Gaps = 33/393 (8%) Query: 18 FRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 P PV ++ ++ ++ N A+A V G + + L R F++ E Sbjct: 47 EHPAWRELPVAIVESDRPQAKLLWVNEHARARRVLPGMRYAAARSLARDLRATVFTA--E 104 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEA------FCDLTGV-RNCRDLTDFGREIRATVL 128 + + + L + SPR+E EA + D G+ +L + + + Sbjct: 105 RMEAAVDALFAILFDFSPRIEP----EADAPGTVWIDPAGMTLLWGELESWALAVEEALA 160 Query: 129 QRTHLTVGVGIAQTKTLA----KLANHAAKKWQRQTGG--VVDLSNLERQRKLMSALPVD 182 QR L V + + A + H A R G L + + ++ +++P+D Sbjct: 161 QR-GLGAVVVVGFHRFRALAIARAHAHRANPDTRDREGPQAWVLRDRRAEARMAASVPLD 219 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 + GI R+ +L ++G++++ + +R V E LE Sbjct: 220 RL-GISPRLRDELASLGVRSLGEFMALPAVELRGRLGVEAEALQARASEGAWAPLEPRRL 278 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 + + D + I + +L + F L+ Sbjct: 279 IDPLVQRTE-LDPPEGDVTRLLFRIEPALSELLSRLADRGAALSALQL-----RFELDHD 332 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 PT D+R ++ LDA+ + + L Q+ LF Sbjct: 333 EPLALRLEP-AAPTLDARLLLELVRLRLDAL-DLPAPVELFVLELEG-QRADPRQIALF- 388 Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 R + + + A G ++ A Sbjct: 389 RAQTRRDLDAANRALARIRAALGPESVTRAALL 421 >UniRef50_Q384F9 Putative uncharacterized protein n=3 Tax=Trypanosoma brucei RepID=Q384F9_9TRYP Length = 581 Score = 75.5 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 81/273 (29%), Gaps = 28/273 (10%) Query: 104 FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR----- 158 + G D + + + G++ T LAK+A + + Sbjct: 233 MLECQGECRVSTAEDVMELLSSVFSAELRVGAWCGLSCTPVLAKMACDECHRKHKLCRQD 292 Query: 159 -QTGGVV-----DLSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDI 211 GGVV D+ + + ++ + L + D+ +G+ ++ L+ GI +AD ++ Sbjct: 293 YSRGGVVGTVRYDIRSHKEAKEFVQNLSLGDIPVVGKPQARLLEDVYGITKCGGIADQEV 352 Query: 212 RFIRKHFNVVLERTVRELRG------EPCLQLEEFAPTKQE--IICSRSFGERITDYPSM 263 R +E + G E L P + I FG ++D + Sbjct: 353 RLGFSLSQSTMEFFLSVAYGTVRLPSEATTTLLRKPPRCKAAHIRRESQFGRVVSDEQFI 412 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII 323 + + L + + L ++ S + T D + Sbjct: 413 NTVMSVF-DNVYTDLVEHDFVTGRVMIETRR---TLPRTHWVVEESEDIAPRTNDRDLLR 468 Query: 324 NAATRSLDAIWQAG----HRYQKAGVMLGDFFS 352 R GV GD S Sbjct: 469 EVTIRLARRFAPRRTEELRDIYSVGVHFGDVRS 501 >UniRef50_A7MP32 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MP32_ENTS8 Length = 90 Score = 75.5 bits (185), Expect = 4e-12, Method: Composition-based stats. Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 2/82 (2%) Query: 341 QKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW 400 +K G+ LGDFFSQGVAQLNLFD++APR SE L+++ D N + GRGTLYFAGQGIQQ W Sbjct: 7 RKRGI-LGDFFSQGVAQLNLFDESAPRANSEALISLRDKFNQQ-GRGTLYFAGQGIQQSW 64 Query: 401 QMKRAMLSPRYTTRSSDLLRVK 422 QMKR LSP TT +D+ + Sbjct: 65 QMKRERLSPCCTTWLADVQTAR 86 >UniRef50_A9VZM8 DNA-directed DNA polymerase n=4 Tax=Methylobacterium RepID=A9VZM8_METEP Length = 127 Score = 75.1 bits (184), Expect = 5e-12, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 8/125 (6%) Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAIWQ----AGHRYQKAGVMLGDFFSQGVAQLN 359 S V L T D+ +I AA S+ W+ RY KAGV+ D +Q Sbjct: 2 RSISTVVTLPEATNDTLALIPAALHSVTRTWREQGCPPWRYSKAGVVTVDLVPLAASQRA 61 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY--FAGQGIQQQ-WQMKRAMLSPRYTTRSS 416 L R S ++M MD N + RG++ A Q++ W K M + YTT+ Sbjct: 62 LIGRFD-RERSTRVMGAMDACNVRFVRGSVVPERARLAQQRRTWTTKFEMRTQCYTTQVD 120 Query: 417 DLLRV 421 +L Sbjct: 121 ELPVA 125 >UniRef50_A8J5N9 DNA polymerase eta/iota (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J5N9_CHLRE Length = 384 Score = 74.7 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 28/88 (31%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS----------------------NNDGCVI 38 + A D++AFYA E P L G+PV V+ +++G +I Sbjct: 29 VVAHIDLDAFYAQVEVGRNPSLRGRPVAVVQYNPWDTEALKTALRPDDPRIFNDSNGSII 88 Query: 39 ARNAEAKALGVK------MGDPWFKQKD 60 A + EA+ GVK G K Sbjct: 89 AVSYEARKFGVKRPGWSVTGLAITAAKR 116 Score = 46.2 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 35/122 (28%), Gaps = 14/122 (11%) Query: 217 HFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF--GERITDYPSMRQAICSYAAR 273 F VR G ++ + I C ++F +T + + A Sbjct: 130 LFGQEAAAGLVRLAAGMDDGEVTARVAP-KSIGCGKTFRGSSALTGMAQVAHWLRELAGE 188 Query: 274 AAEKLR----SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 AE++ + ++ ++ +S + +L + I AT Sbjct: 189 LAERIEADRAEHERLPTALTLNLQ----GGGGGDASHSRAGRLTR--VSAEAICEEATAL 242 Query: 330 LD 331 Sbjct: 243 AR 244 >UniRef50_B3T2L8 Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93E5 RepID=B3T2L8_9ARCH Length = 167 Score = 74.7 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 16/141 (11%), Positives = 43/141 (30%), Gaps = 9/141 (6%) Query: 214 IRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAA 272 + F +RG + ++ + E DY + +++ Sbjct: 4 LINMFGRKSGTYIYTAIRGIDDEPV-TIRAPTLQLSKISTLREDSVDYAFVEKSLLELCE 62 Query: 273 RAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 + + E++ R + + + + S L PT ++ N + + L Sbjct: 63 KLHLSILEENKIFRSVGIHLTQDDLS------TKTRSRMLRHPTLSLDELKNVSRQLLKE 116 Query: 333 -IWQAGHRYQKAGVMLGDFFS 352 + ++ GV + + Sbjct: 117 VLEDQSTLVRRLGVKVSELSE 137 >UniRef50_Q4D5H7 Putative uncharacterized protein n=2 Tax=Trypanosoma cruzi RepID=Q4D5H7_TRYCR Length = 547 Score = 74.7 bits (183), Expect = 7e-12, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 89/291 (30%), Gaps = 39/291 (13%) Query: 85 MSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKT 144 + E++P +E L D + T+ + GI+ T Sbjct: 213 LEVSVEVTPIIERAP-----------SENNSLVDVANMLSRTLADELRIGAWCGISSTPV 261 Query: 145 LAKLANHAA------KKWQRQTGGVV-----DLSNLERQRKLMSALPVDDVWGIGRRISK 193 LAK+A A+ + +GG++ DL E ++ ++ +P+ D+ +G+ + Sbjct: 262 LAKMACEASRNQPPLRPAALASGGILSLKHYDLPTHESLKEFLADVPLSDIPVLGKAQVE 321 Query: 194 KLDA-MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ------- 245 L + GIK D++ + R ++ + G L+ E +Q Sbjct: 322 LLKSVYGIKKCGDISAQEDRMGFSLAPATMDFFLSIAYGAIRLENEIGITLRQKGTRCKA 381 Query: 246 -EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 +I +G RI + + + L +S + + ++ Sbjct: 382 AQIRRESQYG-RIVSEEQFINTVLTIFDSVHKDLLLHDFVTGRVSIDTRR---TVPRVFW 437 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAG----HRYQKAGVMLGDFF 351 ++ T + + R + + Sbjct: 438 VTEEYEEITPRTNNREILRETTLRLAKRFAPRRTKEFLDVYIVSIHFSEIR 488 >UniRef50_Q1LFT0 Putative uncharacterized protein n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFT0_RALME Length = 527 Score = 74.3 bits (182), Expect = 8e-12, Method: Composition-based stats. Identities = 65/381 (17%), Positives = 119/381 (31%), Gaps = 37/381 (9%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 PV V+ + V+ N A ALGV+ G + L VV + + + Sbjct: 31 PVAVIEHER--VVLANGPAVALGVRYGMRRGGVQAL--SADVVQLDRDLAAESALMTSAA 86 Query: 86 STLEELSPRVEIYSID---EA---FCDLTGVRNCRDL-TDFGREIRATVLQRTHLTVGVG 138 L +P V +ID EA D+T R IRA V Q +G Sbjct: 87 LALLHFTPAV---AIDAEPEAATVMLDVTASLRLFGGHRALCRAIRARVRQ-LGTFAQIG 142 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR----KLMSALPVDDVWGIGRRIS-- 192 T A ++ + G+V + + +L+ LPV+ + Sbjct: 143 SGTTAQGAAWLARQ--PLRKTSRGIVRPARRAVRAARMTRLLDRLPVECLH-----TLAD 195 Query: 193 -KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE--PCLQLEEFAPTKQEIIC 249 + L+ +G +T+ + + + L + + G+ E P Sbjct: 196 PEWLEGIGCRTLGQVRRLPRAGLSRRIGTELLARLDQAYGQISSGFAWFEAPPA---FAQ 252 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSAS 309 R+ + + L + ++ + L E Sbjct: 253 RMELPGRVESAEGVLAGAQRLLLALSGWLAVQQAGVTRCVLMLEHERYRLGEDTDSTPVP 312 Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPG 369 ++L P++D + LD I + + + +LF + P Sbjct: 313 LRLAQPSRDPVHLSKLLREKLDKI-RFHAPVGGLALRVEAMEICVPQSDSLFPEPGAEPA 371 Query: 370 SEQLMTVMDTLNAKEGRGTLY 390 L ++DTL A+ GR + Sbjct: 372 E--LGRLLDTLVARLGRDNVL 390 >UniRef50_B5EJ93 Putative uncharacterized protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJ93_ACIF5 Length = 470 Score = 74.0 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 57/382 (14%), Positives = 108/382 (28%), Gaps = 35/382 (9%) Query: 14 CETVFRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 E R + ++ G ++ NA A G++ G + + + Sbjct: 13 VELRERVQAEAAALALVDMQGSAGTLLQVNATALQAGLRTGMTTARALAMLPELQLCTRD 72 Query: 72 SNYELYADMSNRVMSTLEELSPRV---EIYSIDEAFCDLTGVRNCRDLTDFGREIRATVL 128 E+ +S+ L L+PRV E S A D++G R + + A Sbjct: 73 PAAEV-QALSHWAR-LLYSLAPRVVLLEEMSPALA-VDISGNTRLRQDDTLLQVV-AAWA 128 Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG 188 T L+V G+A T A L G L +P+ + Sbjct: 129 AATRLSVRTGVAPTPLGAALLAQWQ--GAGSRSGSCL--EPTDWALLWPQIPITLLP-CA 183 Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG-EPCLQLE---EFAPTK 244 L A+G++ L D + + + L G + P Sbjct: 184 VATRAALLALGVRHCAQLQALDRADLVRRLGPESLHVLDRLSGRIDDPRPALSFPVDPE- 242 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 S + I + +R A+ LR++ Q R + Sbjct: 243 ----VSIPLYDEIRHWEGLRFALHRALQDLQLLLRTQAQASRSWLLQL-------QGRER 291 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 S+++++ PT + ++ L + Q + D Sbjct: 292 QWSSTLEVRDPTTNVETLLTLWQWRLQQ-QPLDFAVHTLHLQALAPQHWPGRQATWWQDG 350 Query: 365 APRPGSEQLMTVMDTLNAKEGR 386 +++ L + G Sbjct: 351 VEEARW----QLVEQLRQRLGD 368 >UniRef50_C5BVF2 DNA-repair protein n=2 Tax=Micrococcineae RepID=C5BVF2_BEUC1 Length = 562 Score = 74.0 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 76/312 (24%), Gaps = 46/312 (14%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+ V ++ + A +A A++ GV+ G + L +V + D+ Sbjct: 47 PIAV--HDSRVLTAVDARARSQGVRRGMRRRTAQGLCPDLELVA----MDEGRDV----- 95 Query: 86 STLEELSPRVEIYS----------IDEAFCDLTGVRNCRDLTD-FGREIRATVLQRTHLT 134 P V+ G + + TV Sbjct: 96 ---RAFEPVVQAVEGVVAGVEVSRPGLVVLAAGGPSRYVGTEEALAELLVGTVADEAGTE 152 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG------ 188 VG+A + + ++ PV D+ + Sbjct: 153 CQVGVADGLL-----------AALLAARDGLIVPPGTSAEYLAGRPVRDLLHVATTRESH 201 Query: 189 ---RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ 245 +S L +GI T+ A + F V + R RG + P Sbjct: 202 ARLADLSDLLRRLGIGTLGAFARLRAGDVLARFGDVGTQGYRLARGLDARPVSVRRPEPD 261 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYG 305 + + A A +L C + +T + + Sbjct: 262 -VTVRADLDPPAARLDTAAFAARRLAEDLQNRLLRRGAVCARLRVLARTEGGSELVRTWR 320 Query: 306 NSASVKLLTPTQ 317 + T Sbjct: 321 IDGAATATELTD 332 >UniRef50_C6QBZ4 Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QBZ4_9RHIZ Length = 497 Score = 74.0 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 105/357 (29%), Gaps = 35/357 (9%) Query: 44 AKAL--GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSID 101 A+AL G++ G + R + +++ + +P V + + Sbjct: 38 ARALAAGLRTGMALADARARLPR--LHAVAADPSADGAFIAHLGDLALAFTPSVALDPPN 95 Query: 102 EAFCDLTGVRNCRDLTD-FGREIRATVLQRTHLTV-GVGIAQTKTLAKLANHAAKKWQRQ 159 D+TG + ++ + ++V + +A T +A+ A Sbjct: 96 GLALDITGCSHLFAGEAMLAARLQKALCAA-GVSVVRLAVAPTPDMAR-ALARFSPANPC 153 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 L+ LPV + + L G+KT+ ++AD F Sbjct: 154 F---------AEDDALVRGLPVAAL-ECAEDDATALRRAGLKTIAEIADRPSLLFTARFT 203 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 + + GE ++ + + E + + + + + E+L Sbjct: 204 SAFTAKLARILGEEDNRITP-RGRRVRYRAEQRCAEPVASHDVIARLLSDLVVSVCEQLG 262 Query: 280 SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 R + + + S PT++ I+ L+A+ Sbjct: 263 ERSVGGRIFTGIFMRADGVVRRIRVETS------QPTRNPDVILRLYRDRLEALADPLDP 316 Query: 340 YQKAG---VMLGDFFSQG--VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 G + + +Q + + QL +D L+ GR + Sbjct: 317 --GFGFDVICFEAIRVEPWIESQGTFNAQDDQKDKVAQL---VDRLSTMFGRERVMR 368 >UniRef50_B7S067 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S067_9GAMM Length = 474 Score = 73.6 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 56/368 (15%), Positives = 111/368 (30%), Gaps = 24/368 (6%) Query: 25 KPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRV 84 + VVVL+ V+ N A ALG++ + L V + A ++ Sbjct: 23 QAVVVLAKQR--VLRANDYAAALGIREDMGATTVRALLADEPVQLLERDTSAEARCLQQL 80 Query: 85 MSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG-REIRATVLQRTHLTVGVGIAQTK 143 ++P + + D ++ D E+ + R V G+A T Sbjct: 81 CCWGYSITPSLHTHGADCLQLEIGSCLALFRGMDLLLAEVSNGIASR-GFRVEYGLAPTP 139 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 A L + + + L + L G L G+ T Sbjct: 140 GAAWLLSFSE--NDQANDYQRPLQDRLTPLPLSLLS------GF-NTTVDSLRRAGLHTF 190 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 D+ + + ++++ G+ ++ P FG + + Sbjct: 191 GDILSLPPSALGRRCGAEFTGHLQQVLGQRENIHPDYQPPT-NFSDEYWFGYEVRGNEEL 249 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII 323 AI LR+ I + +L E +S+S D + Sbjct: 250 MPAIQLLLQSLCRFLRNTQLQTAEILWQLVGIDHSLEEIRVRSSSSH------SDWENWY 303 Query: 324 NAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 L+ + + + ++ S + ++LF PR E L +++D L + Sbjct: 304 QLTRIRLERL-ELKVEVEGLALICDTLNSGQLENIDLFS---PRKQREPLASLLDRLRNR 359 Query: 384 EGRGTLYF 391 G + Sbjct: 360 LGLQAVKK 367 >UniRef50_UPI00006CB3A6 hypothetical protein TTHERM_00659050 n=1 Tax=Tetrahymena thermophila RepID=UPI00006CB3A6 Length = 455 Score = 73.6 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 42/362 (11%), Positives = 112/362 (30%), Gaps = 25/362 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D R +P +L N+ + N +A LG+++G + +++ Sbjct: 60 LHLD-------VLLSERQQDKNQP-CILINSSNQICQLNNQAFQLGIRVGMNTSEIENII 111 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEI----YSIDEAFCDLTGV---RNCRD 115 + ++ N + ++ N ++ L+++ VE+ +I D+T + + Sbjct: 112 -QNILILKMQNQQSSQEVFNSILRYLQQIDKDVEVDFNNKNIYYFLIDVTNYMTEKGFEN 170 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 D I + + GI L+ LA + Q + + ++ Sbjct: 171 PADIASSIANYIHNEFKVESFCGIGANTLLSFLAAQMSFHSILQNSCISRIQEIKDFVSH 230 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPC 234 + L + + + + L+ M I ++ D+ + ++ I + F V ++ G Sbjct: 231 L-HLDIKMMTNLSESLLASLEKMRIMSINDI-NNNLIQIYQTFPQNVTNSLLQIYYGVSR 288 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 Q + SR ++ + + ++ + + + Sbjct: 289 NYHNVQVEIDQ-LKVSRMLKLGEYSIQQLQYLVDQIVEQITLDMKHYKRIAKIAKLQLTK 347 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 L + + + + L ++ QK + + + Sbjct: 348 IDHTNIVVKREI-----LRIDSDYFDLLKSECFQMLKSLQIQNLLLQKITIQVFEMIPID 402 Query: 355 VA 356 Sbjct: 403 SI 404 >UniRef50_C5GUZ9 DNA polymerase iota n=4 Tax=Ajellomyces RepID=C5GUZ9_AJEDR Length = 731 Score = 72.8 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 7/91 (7%) Query: 28 VVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS-NYELYADMSNRVMS 86 ++L V+ N EA+ G++ + K + VV + + D S + S Sbjct: 21 IILHFQKQIVVTCNYEARRRGLRKLQLIKEAKKVCP--DVVIVPGEDLTKFRDASKEIYS 78 Query: 87 TLEELSP----RVEIYSIDEAFCDLTGVRNC 113 L RVE DE F D+T + + Sbjct: 79 FLRGFVSGWGGRVERLGFDEVFLDVTSLVDY 109 Score = 67.8 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 62/238 (26%), Gaps = 88/238 (36%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL--------- 169 IR + + T VGI+ +K LAKLA + K + L Sbjct: 199 LASYIRHQLEEHKSYTATVGISTSKLLAKLAGNVHKPRNQT-----TLLPPYNSTNDDDD 253 Query: 170 ---------------------ERQRKLMSALPVDDVWGIGRRISKKLDAM--------GI 200 + + A + + GIG +I++K+ GI Sbjct: 254 AYFDHDDGDDDDYDEKHAQQQSNIIRFLDAHDISAIPGIGFKIAQKIRRHVLGRELSSGI 313 Query: 201 K---------TVLDLADTDIRFIRKHFNVV-----------------------------L 222 TV D+ + + + Sbjct: 314 YEQLSKADYVTVKDVR------LHPNMGPLTLNELLLLSSSTSSGSGGGVGSGALPKDIG 367 Query: 223 ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKLR 279 + L G + +I S+G+ R+ +R + + A ++ Sbjct: 368 MKIWGLLHGIDPSPVAGARAVPTQISIEDSYGDGRLEGLDVVRGELVALAGSLLRRMV 425 >UniRef50_C8RUC9 DNA polymerase involved in DNA repair n=2 Tax=Corynebacterium jeikeium RepID=C8RUC9_CORJE Length = 610 Score = 72.4 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 46/297 (15%), Positives = 87/297 (29%), Gaps = 41/297 (13%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P V+++ V+A NA A+A G+++G + + + + A + V+ Sbjct: 43 PAAVIADYR--VLACNAAARAQGIRIGMKQRHALAAYPQLN--VAADDPTRQASVHEDVL 98 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + L+++S VE + + E R H G+A Sbjct: 99 AALQDVSAVVETLRPGLLAFPVDALARYYGDEANAVEKLLDAAARLHADCLAGVADDLVS 158 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR------RISKKLDAMG 199 A A K GG + ++ LP+ + I +S L +G Sbjct: 159 AVWAARLGK--SIPVGGG---------AEFIAGLPISVLS-IEPELRAPAHLSATLQQLG 206 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 ++T+ D A + F R G + Sbjct: 207 LRTMRDFAGLPRADVAARFGQEAVEWHRIASGHVDRDVAPRRQ----------------- 249 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 + + A + + R ++T + FA E + L P Sbjct: 250 REDLE--LRYEADEPIARTETAAFIARHVATALHNKLFAAGEACLRLAVRAYLEPPV 304 >UniRef50_C1MYC1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MYC1_9CHLO Length = 681 Score = 72.4 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 75/280 (26%), Gaps = 99/280 (35%) Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT---------GVRNCRDLTD-------- 118 Y S +M L PRVE SIDEA+ D+T G + Sbjct: 166 RYRAASASIMRVLASACPRVEKASIDEAYLDVTAEVDEITRVGGDALTSAIERGVAESGV 225 Query: 119 --------------------FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR 158 ++R V ++ TV G+A K Sbjct: 226 VEPPDVLASDVDRRLAVGASVCADVRRAVFEKLGYTVSGGVAHNK--------------- 270 Query: 159 QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF 218 G KL + + + ++ + Sbjct: 271 ---GGFT-----------------------AATLSKLTHEALTSAG-FEPKTVAWLTRV- 302 Query: 219 NVVLERTVRELRGEPCLQLEEFA-PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 RGE + A + I +SF + +TD + + + ++ + Sbjct: 303 ----------SRGEDAEPVTPNACDGVKSINAFKSF-QPLTDRRRVHSWLSALSSELTAR 351 Query: 278 LRS----EHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 L + + R + + + F ++ S S++ Sbjct: 352 LIEDRATQRRTPRSLKLEYRANHFRESDMQ---SKSLRFP 388 Score = 71.6 bits (175), Expect = 5e-11, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 3/71 (4%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++ FYA E D P+ V +IA N A+A GVK + K Sbjct: 30 VVIHLDLDCFYAQVEARRLGVDGTSIPMAV--QQWSGLIAVNYPARACGVKRHHTVAEAK 87 Query: 60 DLFRRCGVVCF 70 L +V Sbjct: 88 KLCPEIVLVHV 98 >UniRef50_Q2W2X2 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Magnetospirillum RepID=Q2W2X2_MAGSA Length = 493 Score = 72.4 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 60/382 (15%), Positives = 122/382 (31%), Gaps = 36/382 (9%) Query: 16 TVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNY 74 P P+V S V+A N A+ G++ G + Sbjct: 19 CRSAPAWRDIPLVTASAGPHRQVMAVNRVAQVQGLRPGMKLASALAQVPHVQIAPHDPQG 78 Query: 75 ELYADMSNRVMSTLEE----LSPRVEIYSIDEAFCDLTGVRNCRDL-TDFGREIRATVLQ 129 + R++ L E +P + + D++G + T ++ L+ Sbjct: 79 D------ARLLGALAERCTLFTPWCAVEGTAGLWLDISGCGHLFGGETKLLEQLTGR-LK 131 Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR 189 LTV A A ++ T + L + ++ ++ LP+ + + Sbjct: 132 GLGLTVR----AALAATPGAAWAWARFGDATTPI--LDSPDQ----LAPLPLAALR-LPP 180 Query: 190 RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 + L +G++ + DL + F + + G + P + Sbjct: 181 ATVQTLSDLGLRRLGDLLGLPRAQVSLRFGREAVWRLDQALGAEPEPISPRRPPAPYRVH 240 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSAS 309 + SF + I+ + + +L + Q R + + F ++ Sbjct: 241 A-SFADPISRAEDIAATLDHLLEGLCRRLGLDGQGARRLELTL----FRVDGTLARAE-- 293 Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPG 369 + P++D + L I + G + A + G Q AQ +L G Sbjct: 294 IGTGAPSRDPVHLARLFRDRLAEI-RPGFGIEAACLEAGVVQPQAAAQTDL----GGAAG 348 Query: 370 SEQLMTVMDTLNAKEGRGTLYF 391 QL ++D L+ + G G L Sbjct: 349 EAQLSRLLDALDNRLGPGRLMR 370 >UniRef50_Q8TS33 Predicted protein n=1 Tax=Methanosarcina acetivorans RepID=Q8TS33_METAC Length = 108 Score = 72.4 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 36/87 (41%) Query: 198 MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 MGI V +LA+ DI+ + + F + R + G ++EE + II S +F E Sbjct: 1 MGISKVEELANCDIQRLTERFGKMGLRLKQAAHGLDFSEIEESGEAIKSIIWSSTFKENT 60 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQY 284 D + + A + L Y Sbjct: 61 NDPIKIAGYLEMLAESVHKSLFKHRLY 87 >UniRef50_D1PMK7 UV-damage repair protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMK7_9FIRM Length = 121 Score = 72.4 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 4/79 (5%) Query: 74 YELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQ 129 Y S R+ + + + +YSIDE D+T + + REI VL Sbjct: 1 MAFYMQYSARIYNIYRKYIAPEDIIVYSIDEVLMDVTEYLHTYHMSAQELAREIIVDVLN 60 Query: 130 RTHLTVGVGIAQTKTLAKL 148 T +T GI K Sbjct: 61 TTGITAAAGIGTNLFCVKW 79 >UniRef50_Q0BZD3 Putative uncharacterized protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZD3_HYPNA Length = 521 Score = 72.0 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 54/370 (14%), Positives = 97/370 (26%), Gaps = 60/370 (16%) Query: 46 ALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFC 105 A G+ G + + + E A + + SP V + ID Sbjct: 47 AAGIHAGLRFTDARATLPDLASEEI--DRENDARALTALAGWMVRFSPLVGVDGIDGLIL 104 Query: 106 DLTGVRNCRDLT-DFGREIRATVL-----QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 + TG + E+ A + + + VG A T A + K Sbjct: 105 ETTGCDHLFGGESGMAAELSAKLAHAGYGHKIAIAGTVGAAWALTHATV--EMGKP---- 158 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 + +R ++ LP + + L G+ + L D D + + + FN Sbjct: 159 -----VILANGDERTGLADLPTRALR-LSESSQILLRRFGLTRIRQLYDIDRKALTRRFN 212 Query: 220 VV----LERT-VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 R + + G F P E +TD + + Sbjct: 213 SRQSADAVRLRLDQALGIRPEPFTPFRPPPD-YSTRLPCPEPLTDGAGISAGLSRLTEEL 271 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 E L + + S + + V+ R Sbjct: 272 CEHLSASGVGAQSFLLQAFRSDGEIARIRVNAARPVRKPEH----------VMRLFGEKT 321 Query: 335 QAGHRYQKAGVML--------------GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 A G+ L S G +Q + + L + D + Sbjct: 322 DAVDP--GFGIDLLLLEAFRTGEMATGSRLISGGFSQAD--------VDEDALAALADRV 371 Query: 381 NAKEGRGTLY 390 NA+ G G + Sbjct: 372 NARLGEGVVT 381 >UniRef50_C4LH03 Putative DNA polymerase involved in DNA repair n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LH03_CORK4 Length = 573 Score = 71.6 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 88/289 (30%), Gaps = 23/289 (7%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+ ++ + G + + +A+ +GV+ G + + L + ++ + A + Sbjct: 52 PLALV-DQHGVYV-CDRQARHVGVRRGMKRRQAQSLCP--TMHIMPADDDRDARYFEDFV 107 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + ++ +S +E+ + + + + R + V G A T Sbjct: 108 ADVDSISAGIELLRPGLIAVKSAPLVKYYGSEERAITMVLDAVARPGVDVIAGAAGTLPT 167 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW-----GIGRRISKKLDAMGI 200 A A ++ LPV + G + + L+ MGI Sbjct: 168 AVFAARRG-----------MTIPEGHDADFLAGLPVRTLCEDKALGQPQELVDTLEKMGI 216 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 + D A R + F RG P +L T + + + Sbjct: 217 TRMKDWAGLSRRDVSSRFGAEGLWWWSIARGAPSRRLTPQENTSD-LAITHHCDSPESRS 275 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTF--IKTSPFALNEPYYGNS 307 ++ AA ++L Q C ++ I+T Sbjct: 276 DTVAFIGRRLAADLHDQLSDRGQICLRVAIRALIRTPDGDQELERVWRC 324 >UniRef50_Q2SJZ5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SJZ5_HAHCH Length = 432 Score = 71.3 bits (174), Expect = 7e-11, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 107/355 (30%), Gaps = 27/355 (7%) Query: 40 RNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYAD--MSNRVMSTLEELSPRVEI 97 N A GV G L V+ S Y +R S + + Sbjct: 3 ANTSASRSGVDSGMLLNTAFCLCPALRVLRIKS----YKQTQAIHRTAQVASRFSSWISL 58 Query: 98 YSIDEAFCDLTGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 D + ++ ++ + + + I+ +TV L+ A H Sbjct: 59 DEPDGLYLEVASMKRLYTNPSQLRQAIQQA-FSTFKITV---------LSATAPHPKAAH 108 Query: 157 QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRK 216 G+ N E + + L +D + + RI KL +G+K++ D+A + Sbjct: 109 LLARSGIERDVNAESFWRTLKRLKLDRL-NLESRIEYKLRKVGLKSIYDIAKLPSCDLAY 167 Query: 217 HFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 +V L + G + F+P + + + + Sbjct: 168 RIDVDLALYLDHALGRKPWRPSPFSPPRH-FKKRLDLEQEFESLQPLLFYLAKVVKEFCL 226 Query: 277 KLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA 336 L+ C+ + + ++ +++L + +SL+ I Sbjct: 227 FLQERCLTCQSLEVRL------IHRHQTPTQENIRLAQGDNRPESWLYILNKSLERIELT 280 Query: 337 GHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 + F + LF +E+ +++ L A+ G ++F Sbjct: 281 A-PVIMIELFASHFEAAPQQSEYLFAHFNENIAAEK-TRLLNRLTARLGSDRVHF 333 >UniRef50_A4JFF8 Putative uncharacterized protein n=2 Tax=Burkholderia RepID=A4JFF8_BURVG Length = 521 Score = 70.9 bits (173), Expect = 8e-11, Method: Composition-based stats. Identities = 45/346 (13%), Positives = 98/346 (28%), Gaps = 28/346 (8%) Query: 33 NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 G VIA A+ GV++G + + E+ + + + Sbjct: 8 ESGQVIALTRAAREAGVRLGMRRAGALAIAPDVQLSGRDPAKEV--EALGAAALAMLRFT 65 Query: 93 PRVEIYSIDEAFCDLTGVRNC-RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 P V D +++ + R+ R + L +A T A A Sbjct: 66 PSVARMGDDALVLEVSSSLRLFGGVRAILRQARQAI-ADLGLNARFSLAPT---ASGAWL 121 Query: 152 AAKKWQRQTGGVV--DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT 209 A+ G ++ L + + LP + +R++ +D +G K++ DL Sbjct: 122 LARPPGSGHVGGFRRRVAKLSTLSRCLDRLPFGLLPE-SQRMAAWIDGIGCKSLGDLRRL 180 Query: 210 DIRFIRKHFNVVLERTVRELRGEP----CLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 +++ L + GE ++ + +R+ ++ Sbjct: 181 PRAGLKRRCGPGLLDAMDRAYGEAAESFEWEIAPATFDAK-----VELPDRVEHAEALLF 235 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA-SVKLLTPTQDSRDIIN 324 A + L ++H + + + + L T D + Sbjct: 236 AGRRLIVQLTGWLAAQHLAVSRFALLL---DHERGRAAIEPTRLDIALADATGDPEHLAR 292 Query: 325 AATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 L + + + + +LF D A Sbjct: 293 LLKERLGRLALLAPVIAVRLL---ADETRERPGVSDSLFPDPAAAE 335 >UniRef50_A9CXS2 Putative nucleotidyltransferase protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CXS2_9RHIZ Length = 562 Score = 70.9 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 62/394 (15%), Positives = 126/394 (31%), Gaps = 41/394 (10%) Query: 16 TVFRPDLWGKPVVVLSNNDGCV--IARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 + +P+VV + +A ++ A+A G++ G + L + C ++ Sbjct: 41 RISDAHPETQPLVVTGTVKNAIRILALDSRARAHGIRKGQSLSDARALV--HDLDCHQAD 98 Query: 74 YELYADMSNRVMSTLEELSPRV-----------EIYSIDEA-FCDLTGVRNCRDLTD-FG 120 + R+ S E +P V D F D+TG + Sbjct: 99 ADADHAALLRIASWCERYTPLVGLGANPDAERETGVGGDHGLFMDITGCAHLMGGEAALV 158 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++ A +L + + +A T A W G + + + + + L Sbjct: 159 ADLEARLLAQ-GFHARLCLADTPGAA---------WAMARHGAARIISEDSHGEAILPLS 208 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + + + + L +G+KT+ + + F L + + + G + Sbjct: 209 LSGLR-LQPALVASLGRVGLKTIGCITSLPRAPLAARFGAGLMQRLDQALGRETEAISPL 267 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P E+ R F + +T + ++ I + AA E L R + F ++ Sbjct: 268 MPVA-ELSTERRFADPVTHHDAVTHVISALAAAMIEPLERRGLGIRRCRLRL----FRVD 322 Query: 301 EPYYGNSASVKLLTPTQDSRDI---INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 P +D+R I L AG + + + AQ Sbjct: 323 GHVAALEVQT--ARPLRDARMIERLFAERLAGLHEDLDAGFGFDLIRLDILHADPFEAAQ 380 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 ++ G + L +D L A+ G + Sbjct: 381 GDMVAGGRASEGHDAL---VDRLGARLGLDRVQR 411 >UniRef50_Q2Y5T6 Putative uncharacterized protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y5T6_NITMU Length = 506 Score = 70.5 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 66/398 (16%), Positives = 120/398 (30%), Gaps = 56/398 (14%) Query: 14 CETVFRPDLWGKP---VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 E F P+ P V V N C+ N A+A GV G P +F +V Sbjct: 16 VERRF-PE-ALIPAIGVTVRKGNQICIQQANKPAQARGVMEGQPLASALAVFP--DLVIM 71 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEI---YSIDEAFCDLTGVRNC-RDLTDFGREIRAT 126 + + + +P + I I E ++G L + + Sbjct: 72 EQDSHEEGKALQQAVYAALRFTPNIAIQNSGLIAE----VSGSLKLFGGLKKLCQSL-NR 126 Query: 127 VLQRTHLTVGVGIAQTK----TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 V+ L + GIA T LA+ A+ G V E R L+ ALPV Sbjct: 127 VVTAQGLQLSAGIAPTATGAWLLARSAS----------SGTVINGKGEEFRILLDALPVG 176 Query: 183 DVWGIGRRISKKLD---AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE--PCLQL 237 + L+ +G KT+ DL + + F L + G+ + Sbjct: 177 FL----ESAQPHLEVIRGIGCKTLADLQRLPRSGVARRFGQNLPAELDRAYGDAPDPQKW 232 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA--EKLRSEHQYCRFISTFIKTS 295 E Q+ + I + + + LR Sbjct: 233 FEAPEDFQQKMKMMGL---IENAGLLLVPAQRMVEQMCGWLALRHAAVSAFSFVLH---H 286 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH---RYQKAGVMLGDFFS 352 ++L +P+ S ++ L + D + L + + + + + Sbjct: 287 EYSLRQPHKFTSINIHLSEQSSDPAHL----MLLLREHLERTKIVAPVCELELTADEIAA 342 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 L LF + + L ++ +++ G + Sbjct: 343 GADGNLELF--PTMQSETTSLNRFIEKFSSRLGPEAIT 378 >UniRef50_B5JLQ0 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLQ0_9BACT Length = 523 Score = 70.5 bits (172), Expect = 1e-10, Method: Composition-based stats. Identities = 64/351 (18%), Positives = 112/351 (31%), Gaps = 23/351 (6%) Query: 27 VVV-LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 VVV V+ A GV +G + V S E + + Sbjct: 49 VVVDAEAKKPVVLEMTEMAAKEGVVVGLSIPQALARCEGLVVKHRSDQAERMVE--ELLF 106 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + LSPRVE+ DL G + + EI L LTVG+G+A++ + Sbjct: 107 AMAYSLSPRVEMDGAGRVLVDLRGAK-IEEAIARCGEIVGE-LAAMGLTVGIGVAESWVV 164 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLE--------RQRKLMSALPVDDVWGIGRRISKKLDA 197 A LA A + G L + ++ L + V G + L+ Sbjct: 165 AGLAARAVEGRVLCVGPCFALRASQGSRGARSVEVGAFLAGLALGAVEMSG-ALRDVLEK 223 Query: 198 MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 GI+++ A + V + G + A E + S F + Sbjct: 224 WGIRSLAVFAGLKRSAVGARLGVEGLALWDRVTGREER-VVAVAELPAEFVESWDFEYDV 282 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + + + ++R+ H+ F ++ + KL PT Sbjct: 283 DSVEPLLFLLRRFLDTLGARMRAGHKVAAFARVELRLAYGEPVVVEQ------KLPEPTS 336 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 D+ + L+ + +A + L + QL LF+ + P Sbjct: 337 DAGALFGLLAARLEEV-EAESPVAAMELRL-EVADFRERQLGLFESSLKNP 385 >UniRef50_Q7UJH7 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UJH7_RHOBA Length = 552 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 65/408 (15%), Positives = 118/408 (28%), Gaps = 75/408 (18%) Query: 38 IARNAEAKALGVKMGDPWFKQKDLF----------RRCGVVCFSSNYELYADMSNRV--- 84 A A A+GV++G P + D+ R D +RV Sbjct: 2 AASCQRAAAMGVRLGMPIAQAVDITTTLADQHNSGRNVANQSVPPIPTAIIDEHDRVADR 61 Query: 85 -------MSTLEELSPRVEIYSID------------EAFC-DLTGVRNCRD--LTDFGRE 122 L P++ + ++D EA ++ GV + D Sbjct: 62 RALHSLATELQSHLCPQIALETLDRFKWAGRFRHDPEALVAEIDGVTHLFDDEPGLLAAA 121 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK------WQRQTGGVVDLSNLERQRKLM 176 AT+L+R HL + IA T A A + L+ R R + Sbjct: 122 --ATILKRRHLNARLAIAST-LGAAWALATHAPSQTRTKDPAKNHFDFFLAPANRTRDAL 178 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP + + + L +GI+T+ L + L + + GE Sbjct: 179 QTLPPSALR-LNPTDVETLQRLGIETIGSLLQLPRSGLATRIGHGLCNRIAQALGEVDEP 237 Query: 237 LEEFA-PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + PT+ + D +R I A LR + + I Sbjct: 238 ILAIDIPTEHTASLELEYPTDAVDL--IRDRIIRLIESATASLRPLGRGVLRLRCQI--- 292 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ-- 353 F + + L +PT D + N + ++ + Sbjct: 293 DFTESP---SVTLESGLFSPTLDLNHLSNLMIGAFESHACQSK--------VSHLRLDVL 341 Query: 354 -----GVAQLNLF------DDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 Q ++F D + ++D+L+ + G ++ Sbjct: 342 QDAILASTQPSIFGPGFESDTQTDWTRQTDIARLIDSLSGRLGEESVR 389 >UniRef50_B8CNV0 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CNV0_SHEPW Length = 527 Score = 70.1 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 52/383 (13%), Positives = 120/383 (31%), Gaps = 59/383 (15%) Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRV----MSTLEELSPRVEIYS---- 99 GVK+G + L +V F + S+ + + P S Sbjct: 49 GVKLGMSLSTAQSLMPSAMLVEFDATIS--QQASDWLCQWSYEFSARVVPLRCSLSNEDQ 106 Query: 100 ---------IDEA-----FCDLTGVRNCRDLTD-FGREIRATVLQRTHLTVGVGIAQTKT 144 +DE +++ + + D + R + L V + +A+T Sbjct: 107 KKTSKIKLDVDEFVSNTLLLEVSSMALIFNGIDKLIEQYRQR-AKALGLEVSLALAKTPL 165 Query: 145 LAKL----AN--HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 A+L A+ + K + D N ++ L++ LP+ + + + + L + Sbjct: 166 AAQLLACHASMENQQAKLATEVFSSNDYLNTDKTLLLLNQLPIALLP-LSDFLKQSLHDI 224 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 GIK+ L+ + + + F L + + ++ G L P S+ +++T Sbjct: 225 GIKSFASLSALPDKELGRRFGSKLLQLLAKISGRLPQPLSYVEP-------EESYQQKLT 277 Query: 259 DYPSMRQA------ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 + + A L+ + + + + Sbjct: 278 LLHEVELMQGIVFPLGRMLKEMASYLQLRQLAIQKLKLSLIYRD--SDRSQLDIVIHYPF 335 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN-----APR 367 DS ++N L+ + + + + F V F Sbjct: 336 AEHRSDS--LLNLCRMQLERVTL-YQPVVEMVIHVDKFVPIAVNHDCWFGQQKAAQGQRS 392 Query: 368 PGSEQLMTVMDTLNAKEGRGTLY 390 +++LM +++ + G+G + Sbjct: 393 EKTQRLMALLEA---RLGKGKVK 412 >UniRef50_Q7R724 Putative uncharacterized protein PY07765 (Fragment) n=3 Tax=cellular organisms RepID=Q7R724_PLAYO Length = 707 Score = 70.1 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 78/262 (29%), Gaps = 24/262 (9%) Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAF--- 104 GV G + + L G+ S + + + + +P + S+D F Sbjct: 453 GVAPGMALSEAQALCP--GLTAVSRDPXAEQRVLSHLAERCLRFTPWI---SLD--FPAT 505 Query: 105 --CDLTGVRNC-RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 ++ G R V V G+A T A L A Sbjct: 506 LQLEVRGSLRLFGGPARLAGAARQ-VCAADGHAVQCGLAPTPMAAWLLARAGFPAP---- 560 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV 221 + E R ++ L + + GI ++S +L G++ + DL + + + Sbjct: 561 ----VLETEALRSVLGDLSIAAL-GIDDKLSGRLARAGLRVLRDLWRMPRDGLARRYGSD 615 Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 L R + E+ G L F + R D + + + LRS Sbjct: 616 LLRRLDEVVGSRPQPLGRFHAPPR-FRAERELAMETEDLTRVFPLVEALLMEFEGFLRSR 674 Query: 282 HQYCRFISTFIKTSPFALNEPY 303 + ++ A Sbjct: 675 DAVAAGLELELRXVRAAPTRVC 696 >UniRef50_A8UAE8 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UAE8_9LACT Length = 110 Score = 70.1 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Query: 31 SNNDGC-VIARNAEAKA-LGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTL 88 N DGC V+A + K G+K G ++ + LY ++ + + Sbjct: 11 PNQDGCLVLAASTRVKKEYGIKTGSRRYEIPR---HSFIQIVEPRMTLYLRINEIINAIF 67 Query: 89 EELS--PRVEIYSIDEAFCDLTGVRNCRDLT-DFGREIRATVL 128 E + +YSIDE+F D+T T + +I+AT+ Sbjct: 68 LEFVSENDLHLYSIDESFLDVTASNTLYGSTKEIALKIQATIW 110 >UniRef50_C4QSD8 DNA polymerase IV / kappa, putative (Fragment) n=1 Tax=Schistosoma mansoni RepID=C4QSD8_SCHMA Length = 121 Score = 69.7 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 4/70 (5%) Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + RE+R V T LT G+ +AK+A+ K + + E K Sbjct: 54 SAWEAVREMRFRVFCATRLTCSAGLGPNTLIAKIASDWIKPCGQHEIA----NTSEAVDK 109 Query: 175 LMSALPVDDV 184 M +PV V Sbjct: 110 FMQTMPVRKV 119 >UniRef50_B2T2I7 Putative uncharacterized protein n=3 Tax=Burkholderia RepID=B2T2I7_BURPP Length = 593 Score = 68.2 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 60/375 (16%), Positives = 122/375 (32%), Gaps = 27/375 (7%) Query: 44 AKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEA 103 A GV G L G+ +++ + L +P+V S+ EA Sbjct: 69 ALRAGVHAGHSRSYALALAP--GLELLAADTARETQAFEAIALALLTYTPKV---SLTEA 123 Query: 104 ---FCDL-TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 ++ +G+R L + ATV T + A T A L A Q+ Sbjct: 124 HTLLLEVGSGLRLFGGLRALLSRVSATV-AEFGYTARIACAPTAWGAWLLAQARAVRQKN 182 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 + +++ L V + + + L +G T+ DL + + F Sbjct: 183 R---WHVIKETSLARVLDGLSVSLLP-VTQAHRDALAHVGCTTLADLRQLPRSGVVRRFG 238 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 + + + G E F R+ + ++ A + A L Sbjct: 239 SGILDLLAQAYGTRPDPRESFRAPA-SFHAQLELPSRVDNADALLFAARRLIVQLAGWLS 297 Query: 280 SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA--IWQAG 337 + H + ++ + + P +S V P++D+ +I L+ + Sbjct: 298 AHHAALSGYTLLLEHELASRHAP-TTSSLKVAWAIPSRDAEHLIWLLREKLNQTVLAAPV 356 Query: 338 HRYQKAGVMLGDFFSQGVAQLN-LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 + + D + Q + LF + + +++ L+A+ G + + Sbjct: 357 IELKL----VADQIGEYAGQSDTLFPMPESDG--DSIARLLERLSARLGPENVLQMS--V 408 Query: 397 QQQWQMKRAMLSPRY 411 Q + +RAM Y Sbjct: 409 QDDHRPERAMRVEAY 423 >UniRef50_A7HCF7 Putative uncharacterized protein n=2 Tax=Anaeromyxobacter RepID=A7HCF7_ANADF Length = 555 Score = 68.2 bits (166), Expect = 6e-10, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 65/219 (29%), Gaps = 30/219 (13%) Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEII 248 ++ +L +G+ LA + F R RGE L +AP Sbjct: 230 PAVAARLRGLGVADAGALARLPAGTLAHRFGPDGVAAARLARGEDDTPLSPYAPE----- 284 Query: 249 CSRSFGE-------RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 + + A+ A R A +L + +K P Sbjct: 285 ---TLPVEALELDAPAESAEPLLFAVKRLADRVAARLAGRGLGATRLKIVLKLDPRGEER 341 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG--HRYQKAGVMLGDFFSQGVAQLN 359 V L PT + + A + A+ G Q A + + QL Sbjct: 342 VI------VPLAQPTAAAARWLVPAKEHVFALRLPGAVTSVQLAAIEV---APLAAEQLA 392 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + + L V+ L + G G L FA + +++ Sbjct: 393 I---DDRPEALAALENVLARLTGRLGDGAL-FAAEPVER 427 Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 32/96 (33%), Gaps = 4/96 (4%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+ V+S DG ++ +A A A GV+ G R V E V Sbjct: 36 PLAVVS--DGKIVHCDAAAAADGVRPGATVSAALAACGRLRTVALDPAAE--RAALRAVA 91 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + L+P VE + D D + R Sbjct: 92 EAVLLLAPAVEPVTPDVVLLDASSAHLLAGAVQGAR 127 >UniRef50_A7MTX6 Putative uncharacterized protein n=3 Tax=Vibrio RepID=A7MTX6_VIBHB Length = 86 Score = 67.8 bits (165), Expect = 7e-10, Method: Composition-based stats. Identities = 27/38 (71%), Positives = 31/38 (81%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVI 38 MFAL D NAFY S E VFRP+ GKP+VVLSNNDGC++ Sbjct: 1 MFALVDANAFYCSAEQVFRPEWRGKPIVVLSNNDGCLV 38 >UniRef50_Q0PGJ8 AIBO80 (Fragment) n=1 Tax=Bos taurus RepID=Q0PGJ8_BOVIN Length = 285 Score = 67.8 bits (165), Expect = 8e-10, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 17/34 (50%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG 35 D++ F+ S RPDL GKPV V SN Sbjct: 77 IMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGT 110 >UniRef50_A9IPJ8 Putative uncharacterized protein n=4 Tax=Bordetella RepID=A9IPJ8_BORPD Length = 488 Score = 67.4 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 43/311 (13%), Positives = 88/311 (28%), Gaps = 24/311 (7%) Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 L + +P + + D + + A L+ L +G+A T A Sbjct: 84 LLQYTPDIALAEPDAVLLQVDASLAYFGGPRALHKRVAATLRAMGLHASLGLAPTAQGAW 143 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 L A + + + + ALP + + L +G T+ L Sbjct: 144 LLARQAVPRAPRR-----VLQARTLARRLDALPCALLPS-AQARLDWLHDIGCHTLGALR 197 Query: 208 DTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA- 266 +++ L R + G+ P + F +R+ + A Sbjct: 198 RLPRAGLQRRCGTGLVRALDAAYGDAAECHAWIQPPAR-------FRQRLELPDYIEHAD 250 Query: 267 -----ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD 321 + L + + + ++ ++ P S L P Sbjct: 251 AVLASARRLLEQLCGWLAARQRAVQHLTLVLEHERGRHARPPTVLPLS--LAQPAWQQPH 308 Query: 322 IINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 ++ L + + + Q A LF + P ++D L+ Sbjct: 309 LLGLLREKLGRLQLEAPVISLV-LRVTGTVEQPAASTCLFPEPGGTPAEHA--RLLDLLS 365 Query: 382 AKEGRGTLYFA 392 A+ GR + A Sbjct: 366 ARLGRERVLHA 376 >UniRef50_D1UT44 Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UT44_9BURK Length = 599 Score = 67.4 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 114/371 (30%), Gaps = 19/371 (5%) Query: 44 AKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEA 103 A GV+ G L ++ + E + L +P++ + Sbjct: 69 ALRAGVQPGHSRSYALALAPELKLLTADAGRE--IQAFEAIALALLTYTPKLSLADTHTL 126 Query: 104 FCDL-TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 ++ +G+R L + ATV T V A T A L A + G Sbjct: 127 LLEVGSGLRLFGGLRTLLARVSATV-AEFGYTARVACAPTAWGAWLLAQARA---NRQGR 182 Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVL 222 + + +++ LPV + + +G T+ +L + + F + Sbjct: 183 RWHVVKEDSLARVLDRLPVSLLP-VAPTYRDAFAHLGCATLAELRRLPRAGVVRRFGSGI 241 Query: 223 ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH 282 + + G E F R+ + ++ A + A L + H Sbjct: 242 LDLLAQAYGTRPDPRESFRAPA-SFHAQLELPSRVDNADALLFAARRLIVQLAGWLSAHH 300 Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA--IWQAGHRY 340 + ++ + + P +S V P++D+ +I L+ + Sbjct: 301 AALSGYTLLLEHELASRHSP-KTSSLRVAWAVPSRDAEHLIWLLREKLNQTVLAAPVIEL 359 Query: 341 QKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW 400 + LF E + +++ L+A+ G + +Q Sbjct: 360 KLV---ADQIAEYAGQSDTLFPMPESDG--ESIARLLERLSARLGPENVLQMS--VQDDH 412 Query: 401 QMKRAMLSPRY 411 + +RAM Y Sbjct: 413 RPERAMRVEAY 423 >UniRef50_C6QRJ6 Putative uncharacterized protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRJ6_9BACI Length = 114 Score = 67.0 bits (163), Expect = 1e-09, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 10/99 (10%) Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAG 344 R +S ++ S N SV T T + DI + R L + R Sbjct: 4 RTVSFSVRYSIMKENYQ------SVTFDTGTNLTMDIYHVCKRILHKFYDGQNMRVIVIY 57 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 V L + + QL+LF+D R L+ MD + + Sbjct: 58 VSLENLMDEESLQLSLFED---RTKERTLVKTMDAIRNR 93 >UniRef50_Q08N74 Nucleotidyltransferase/DNA polymerase involved in DNA repair, putative n=2 Tax=Cystobacterineae RepID=Q08N74_STIAU Length = 503 Score = 66.6 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 108/384 (28%), Gaps = 42/384 (10%) Query: 20 PDLWGKPVV----VLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 P L GKP V V + A G + G L + F+ E Sbjct: 21 PGLAGKPFALVEEVRGQRR--VAFASTSALKAGARAGMTLTAANALEP--ALQHFAYRAE 76 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRA-TVLQRTHLT 134 A + + L ++P ++ + D + D + +RA V Sbjct: 77 EEARALSSLGEALLCVAPAFQLAAPDGLWFDASAAHLFGGEEGLC--LRALEVCSGHGYR 134 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 +A + A + + VV + L + + Sbjct: 135 GRAVVASELF----TSQALARHGTRPVQVVAPQESAPALASLPLLALAE------ASRAP 184 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ-----LEEFAPTKQEIIC 249 A+G T+ ++A + R +G LEE + Sbjct: 185 FTALGFSTLGEVAALPAGAVTARGGAEGLRAHMLCQGRDDTPFVAAVLEEVLEER----- 239 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSAS 309 + + ++ A+ + R +L + +S ++ P Sbjct: 240 -MTLEWPAESFEPLQFALKTVLDRICARLAGRRRAAVQLSFVLRLD------PKGQVELP 292 Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPG 369 + L PT S+ +++ A L + + + + QL L D Sbjct: 293 LTLARPTARSKLLLDLARHRLSDLKLEN-PVAALSIRVEEHSEDRGQQLALGDAPEGDA- 350 Query: 370 SEQLMTVMDTLNAKEGRGTLYFAG 393 L V+ L G G+L+ A Sbjct: 351 --ALEVVLSRLATTLGEGSLFCAA 372 >UniRef50_A9MHU5 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MHU5_SALAR Length = 86 Score = 65.9 bits (160), Expect = 3e-09, Method: Composition-based stats. Identities = 47/64 (73%), Positives = 50/64 (78%) Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 LG FFSQGV QLNLFDDNAPR GSE+LM V+D LNAKEGRG L G+GIQQQ MKR M Sbjct: 7 LGGFFSQGVVQLNLFDDNAPRAGSEKLMEVLDHLNAKEGRGILISLGEGIQQQLAMKRDM 66 Query: 407 LSPR 410 S R Sbjct: 67 RSSR 70 >UniRef50_C6XNZ3 Putative uncharacterized protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ3_HIRBI Length = 511 Score = 65.5 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 63/393 (16%), Positives = 122/393 (31%), Gaps = 46/393 (11%) Query: 22 LWGKP------------VVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQKDLFRRCGVV 68 L KP V+V G V+A N A++ + G + + +V Sbjct: 9 LKDKPKKSGKTVKRIPFVLVEKGRHGIEVVAANEAAQSRNIYSGLAFTDARARTP--DLV 66 Query: 69 CFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-FGREIRATV 127 + + ++ + SPRV D ++TG+ + IRA + Sbjct: 67 FEEIDRVADRNALQKLADWMVRFSPRVSTDGNDAIVMEITGLDHLFGGEAKLMERIRACL 126 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI 187 + IA T A R G V +S L +++ ++ L V + + Sbjct: 127 QTN-GYISQIAIAGTFGAANALARY-----RINIGDVFVSQLGHEKQDLADLSVKALR-L 179 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT-----VRELRGEPCLQLEEFAP 242 + + L G+ + L D + + + F + + G ++ Sbjct: 180 SDKTVQLLRKFGLTRIDQLYGLDRKALTRRFASREAADAVVLRLDQALGIRHEPIKPVIA 239 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 E S E + + A+ ++ KL R + F ++ Sbjct: 240 EP-EWAMRMSCPEPVAAQDGVEYALDHLLSQLCHKLDMHGVGARDFCLYA----FGVDGK 294 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN--- 359 SAS + +D+ I R L + + G+ L + + L+ Sbjct: 295 CSHISASS--ASAVRDANHI----RRLLKEHVETINP--GFGIDLFMLSAARIEGLDHDA 346 Query: 360 --LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 L D E + + D L + G + Sbjct: 347 KPLAADMVGGFDEEAFIRLADRLAVRLGEKAVQ 379 >UniRef50_UPI0001BC93B4 ultraviolet light resistance protein B, interruption-C n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC93B4 Length = 98 Score = 65.5 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 L + +G NLF + +E+++ V+D ++ + G+GTL A W ++R M Sbjct: 3 LANLCQKGEYTENLFS-ISQPVATEEIIGVLDAIDGRWGKGTLRVASVPTNPDWGLRREM 61 Query: 407 LSPRYTTRSSDLLRV 421 +S R+TTR L V Sbjct: 62 MSQRFTTRVDQLWTV 76 >UniRef50_B6R5I9 Protein ImuB n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5I9_9RHOB Length = 442 Score = 65.5 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 98/302 (32%), Gaps = 18/302 (5%) Query: 90 ELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLA 149 +P V + D D++G + + L+ V +A T A A Sbjct: 24 RYTPLVAVVGDDTLLLDISGCAHLFGGEKAMLDDCLNRLKLQGFHVSGAVADT-VGAAWA 82 Query: 150 NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT 209 R GGV QR + L ++ + + I L +G+ + DL D Sbjct: 83 V------ARSDGGV---IAPREQRDALEPLSIELLR-VEENIVTSLMRVGLTVIGDLLDR 132 Query: 210 DIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICS 269 + F L R + + G + T ++ R F E I + I S Sbjct: 133 PRAPLANRFGEDLVRRLDQALGMEGEPISPRLYTPA-LVVERRFFEPIAREDDVVAVIQS 191 Query: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 + ++L + R + +N G S ++ + ++ Sbjct: 192 LSENLQKELEKRQEGGRAFELVLFRVDGVVNRLAVGTSGPIR---APNLVLQLFRERLKT 248 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 + AG Y + + + AQLNL ++ + L ++D L A+ G + Sbjct: 249 VGDELDAGFGYDLIRLAVLEAQCCSAAQLNLEGNSHH---EDDLAELVDRLGARLGLAQV 305 Query: 390 YF 391 Sbjct: 306 SR 307 >UniRef50_A3JJR9 DinP DNA polymerase-like protein n=3 Tax=Marinobacter RepID=A3JJR9_9ALTE Length = 472 Score = 65.5 bits (159), Expect = 4e-09, Method: Composition-based stats. Identities = 54/392 (13%), Positives = 113/392 (28%), Gaps = 51/392 (13%) Query: 27 VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 V+V ++ + A A + GV+ G L + ++ + A + Sbjct: 27 VIVDASGQKVLQACTQ-ASSQGVQPGMRLKTALSLV--ADLAMVRTDPQQEARVLQDQAR 83 Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 L + + + D ++ ++ E L LT +GI T A Sbjct: 84 WLYRCAAHITLVPPDGLLAEIGSLQKLYGGLPAVWETVEQGLNERRLTAWLGIGHTPLAA 143 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK-------KLDAMG 199 +L K G ++ +L+ LP+ + ++ +L +G Sbjct: 144 RLIARTGK-------GECS-ADQGHMLRLLEQLPLAE--------AEFDTQACTRLQRLG 187 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 + T+ +L + + + ++++G + P + F E I Sbjct: 188 LNTLGNLFALPAAELARRLGPKILAHSQKIQGTRPDPQTPWQPPHR-FRQQADFVEDIEH 246 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 + + + E L Q ++ + Y + +L T Sbjct: 247 SQGLLFPLQRILSELEEDLCWRQQETDSLNLLL----------CYRYTEPTRLHIRTSGP 296 Query: 320 RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-----QGVAQLNLFDDNAP-RPGSEQL 373 A + + Q V L + + +L + L Sbjct: 297 EHRAEAFLNLIR-LRFEQQPLQAPVVSLVLLVKRFIGREAASGQDLLGETQDMNEAWHTL 355 Query: 374 MTVMDTLNAKEGRGTLY----FAGQGIQQQWQ 401 + L A+ G G L A +Q W Sbjct: 356 ---ISRLQARLGDGALQQLAPHADHRPEQAWA 384 >UniRef50_B8ELP7 Putative uncharacterized protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ELP7_METSB Length = 488 Score = 64.7 bits (157), Expect = 7e-09, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 105/358 (29%), Gaps = 37/358 (10%) Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + + ++C ++ E A ++ +P + + D D++G + Sbjct: 1 MNLADARAM--HPALICAEADPEGEAQTLAHIVDWCRRFTPLAALDAPDGVMLDVSGAAH 58 Query: 113 CRDLTD-FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 EI ++ ++ G+A T A A ++ L Sbjct: 59 LFGGEASLLAEIEESLRRQ-GFCAQGGLASTPE----AAFALARYGAADFAARILPPALD 113 Query: 172 QRKL---MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 +L + LP+ + + L G++ + D+ I + L + Sbjct: 114 AVELERRLGGLPLAALR-LEPETLSALAEAGLRRIRDVTMRPRAPIAARCGLALYARLDG 172 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 L G + + R F + + + +I A L + R + Sbjct: 173 LLGRVKTPISP-RFEAPAFMTERRFLDGLCRREDVEASIAGLAQDLCALLTRHGEGARRL 231 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI--------WQAGHR- 339 + F ++ + V + P +D I +A+ + AG Sbjct: 232 EASL----FRVDGEVMHFT--VGTMRPLRDPALIARLFHERFEALSLAQDGEAFDAGFGF 285 Query: 340 --YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS----EQLMTVMDTLNAKEGRGTLYF 391 + A + + Q + + E L ++D L A+ G + Sbjct: 286 DVIRLAALA---LERKDPEQTGWSGQDRAEDRAQDHVEDLAELIDRLGARLGLRRVTR 340 >UniRef50_B8H428 Protein imuB n=6 Tax=Alphaproteobacteria RepID=IMUB_CAUCN Length = 458 Score = 64.3 bits (156), Expect = 9e-09, Method: Composition-based stats. Identities = 54/348 (15%), Positives = 100/348 (28%), Gaps = 26/348 (7%) Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 G+ G L +V + + SP V I D F D+ Sbjct: 2 GLFPGQKAADALALVP--DLVTADHDPAADRAALEALCDWCVRFSPAVAIDGDDGLFLDI 59 Query: 108 TGVRNCRDLTDFGREIRATV--LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 TG + + V L R + A A ++ + Sbjct: 60 TGTDHLWGGE--AAMLVDLVSRLARWGVPAR----AAIADTAGAAWALARFGPD----LA 109 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 ++ Q ++ LPV + +G +L +G+ V + + K F + Sbjct: 110 IAPPGEQTAAIATLPVAALR-LGDAAEAQLPRLGLHRVGQVLALPRAQLAKRFGLAAVLR 168 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSR-SFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 + + G L P R +F E I+ + + A +L +E + Sbjct: 169 LDQALGAASEALTFRRPA--SPWFDRLAFFEPISAPEDLARVAADALALICARLEAEGRG 226 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 + G + + D++ + LD + G + Sbjct: 227 AKRFEVVFHRLDGRAFPVRVGLARIGR------DAQRLARLVKPKLD-MVDPGFGIEVVT 279 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 V AQ D +A E L ++D L + G ++ A Sbjct: 280 VHAFAVEPMAAAQAR-LDADAAASADETLAPLIDRLVNRLGENRVWRA 326 >UniRef50_B8IIJ8 Putative uncharacterized protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IIJ8_METNO Length = 119 Score = 63.9 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 3/76 (3%) Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI--QQQWQMKRA 405 D + LF R LM MD N + GRGT+ A G+ +++W K Sbjct: 30 TDLVRLAESPRALFGSLD-RERGGALMAAMDACNRRFGRGTVVPARAGLEAKRRWATKFE 88 Query: 406 MLSPRYTTRSSDLLRV 421 + +PRYTTR +++ V Sbjct: 89 LRTPRYTTRLAEVPVV 104 >UniRef50_Q2NAX5 Putative uncharacterized protein n=3 Tax=Erythrobacter RepID=Q2NAX5_ERYLH Length = 529 Score = 63.9 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 52/357 (14%), Positives = 104/357 (29%), Gaps = 39/357 (10%) Query: 50 KMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG 109 + G + L + S+ D ++ + P + D D+T Sbjct: 68 RKGMMLADARTLCPE--LKVAPSDPAGDLDALEKLALWAQRWGPWSALDPPDGVVVDVTA 125 Query: 110 VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 V + + + +T + IA T A A + L+ Sbjct: 126 VAHLFGGETKLLADAQALFAKRGITARLAIAPTAG----AAWALAHYGPPRS---ILAAD 178 Query: 170 ERQRKLMSALPVDDVWGIGRRISK----KLDAMGIKTVLDLADTD-----IRFIRKHF-- 218 + +S LPV + R+ L +G+K + +L + I + F Sbjct: 179 DDMAARLSELPVAAL-----RLDDDVLTILRRLGLKKLGELGKVESEGGGRDAIMRRFRN 233 Query: 219 --NVVLERTVRE--LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 + VR L G+ L + R E I + Q + A Sbjct: 234 RKSPAANPLVRMDQLLGKVPEPLLPVIAQHDPL-VQRRLVEPIRHRALLDQVLRDLAEDM 292 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 +L R + + + ++L T+D+ + + L+ I Sbjct: 293 VRELEGRGSGARRLELGLWRVDGEVVV------RRLELAAATRDADHMCRLFSEKLEDI- 345 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 AG + + +AQ ++ + + L +D L + G + Sbjct: 346 DAGFGIETVRLRASWAEPLALAQGDI--EASAEEHGTSLAAFVDRLTTRLGPRAVRR 400 >UniRef50_A2SG06 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=A2SG06_METPP Length = 466 Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 58/376 (15%), Positives = 109/376 (28%), Gaps = 29/376 (7%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV 95 ++ N A ALGV+ G L + +V F + ++ Sbjct: 6 MLLGANRAAHALGVRAGQSVATALSLLPQ--LVVFPRDRPR-EAALVERLALALAALTPH 62 Query: 96 EIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKL--ANHAA 153 D ++ + + + + V G A T A L + A Sbjct: 63 LSLIPDGVLLEVQSTLRLFGGIHALLHRAQALARTSGVQVRTGCAPTPGAAWLFATSGLA 122 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF 213 ++ Q + L LP + S+ L A+GI+T L Sbjct: 123 RRHALQARSSAQQLDRLPVASLARLLPPS-LH-----QSELLQALGIRTFRALRALPRAG 176 Query: 214 IRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY--A 271 +++ V L R + G+ F P + + R +R + + A+ + A Sbjct: 177 LQRRLGVDLGRALDRCYGDAPDPRPWFVPPEHFLAR-RELLQRADEAAVLMAAVEALLPA 235 Query: 272 ARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 R +LR + ++ EP ++L P++D + L Sbjct: 236 LRGWLQLRWQAVT----VLALRLRHEHGREPCPDTRLRLQLSAPSRDIAQLALLWRERLQ 291 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 A + + L G L + G ++D L A+ G + Sbjct: 292 RHVLAA-PVYELALELEAAVPHGGTPGELLPGPGRQDGEHA--ALLDRLTARLGSDHVRR 348 Query: 392 AGQGIQQQWQMKRAML 407 W + Sbjct: 349 --------WVPRADHR 356 >UniRef50_Q5QUT8 Homolog of DinP DNA polymerase involved in DNA repair n=1 Tax=Idiomarina loihiensis RepID=Q5QUT8_IDILO Length = 467 Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 55/411 (13%), Positives = 127/411 (30%), Gaps = 46/411 (11%) Query: 17 VFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNY 74 +PD P+ + L N ++ N A+ GVK L + +V Sbjct: 17 RLQPDSNTLPLALYQLQGNQSVIVQCNTLAREAGVKPSIQTVMAISLCEQLQLV--EYIP 74 Query: 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG-REIRATVLQRTHL 133 E + ++ + L + + ++ +Y +L+ + D + V + Sbjct: 75 EREQQVLQQLATRLYQWAAKLVLYPPKGLAIELSSLAQLYGGMDAVFNTLSREV-DALPI 133 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 + +A A+L V L+ E +L++ LP+ G+G + K Sbjct: 134 KAQLAVADNPLAAQLLAEY--------DCPVSLNRKES-AQLLAQLPIGAA-GLGTKTQK 183 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE---PCLQLEEFAPTKQEIICS 250 A G + + +L + + + + + ++G +Q + Sbjct: 184 HCKAAGFRQLGELIQLSGDEVGRQLGLETQLYLERIQGRQQQSYNFFTPPESFRQSLD-- 241 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI--KTSPFALNEPYYGNSA 308 I + + + + L + + +S + + P ++ Sbjct: 242 --LVTEIPHWQGLLFPLKRLFGELEDFLYQRQKVTQQVSIELHHRYEPPSVVP------- 292 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 V L P + ++ +++I + ++ + + F R Sbjct: 293 -VALAEPGWRGQSFLSLLQLKMESIPLP-EAVIEITLVANELLQSEQHNSHFFGVQQHRH 350 Query: 369 GSEQLMTVMDTLNAKEGRGTL---------YFAGQGIQQQWQMKRAMLSPR 410 + QL + L AK G + ++ K +LSP Sbjct: 351 ETLQL---IGRLQAKLGNNAVFSPAMNDDPRPGNNEFRRPAGEKPQVLSPA 398 >UniRef50_C7M0M6 Putative DNA-directed DNA polymerase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0M6_ACIFD Length = 517 Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 69/390 (17%), Positives = 121/390 (31%), Gaps = 52/390 (13%) Query: 44 AKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV-EIYSIDE 102 A+A G+ +G + VV E A RV L +SP V ++ + Sbjct: 56 ARAAGIPLGARAPMVRARLGDGRVVAVDPIAE--ARWLARVHRALWSVSPGVGQVAGVRG 113 Query: 103 AF-CDLTGVRNCRDLTDFGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQ 159 AF + R + V + V + + A +A A Sbjct: 114 AFAIEARAARRFYGTE---YALVERVRAALDGTVPTRVALGASIAGALIATVAGA---TT 167 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 GG ++ + R +A PV+ + R ++ L +G++ V D + F Sbjct: 168 DGGGAEVGS----RAWFAAQPVELLP---RWLAGPLRDVGVRRVGGFQRIDTAAVAARFG 220 Query: 220 VVLERTVRELRGEPCLQLEEFAP-TKQEIICSRSFGER-----ITDYPSMRQAICSYAAR 273 R R +R E L L P + GE ++ + +A Sbjct: 221 DRGLRWHRLVRLEADLPLVRTPPLEPDAVAIDVEEGEDAQSVRFRLRGALDLVLAEHADV 280 Query: 274 AAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI 333 A + RS F E V+ + +I+ + D Sbjct: 281 APARWRS----------------FVDLEGAVALERVVERPVG-GTAAEILESVRALSDRA 323 Query: 334 W-QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 G + GV + + QL+L D P + + L + G + A Sbjct: 324 EGARGRPVR-VGVEILAWSVPQPPQLSL--DGVPGARRQAVRQAFHVLQQRYGPEAVRVA 380 Query: 393 GQG-IQQQWQMKRAMLSPRYTTRSSDLLRV 421 G G + + + +R +S +T V Sbjct: 381 GPGPVGRGFADRRPWVS--WTGVW---PVV 405 >UniRef50_B3R9B4 Required for the error-prone processing of DNA lesions along with dnaE2 and imuA n=25 Tax=Burkholderiaceae RepID=B3R9B4_CUPTR Length = 514 Score = 63.2 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 68/402 (16%), Positives = 125/402 (31%), Gaps = 47/402 (11%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 PV V++ V+ N A LGV+ G + L +V + A + V Sbjct: 34 PVAVMAREQ--VVLANGPAMQLGVRYGMRRGGVQAL--SADIVQLERDPAAEAALMEAVA 89 Query: 86 STLEELSPRVEIYSIDE------AFCDLTGVRNCRDL-TDFGREIRATVLQRTHLTVGVG 138 L +P V +DE D++ R +RA V Q VG Sbjct: 90 LALLRFTPGVT---VDEEPEAATLMLDVSASLRLFGGHRALCRAVRACVRQ-LGTVAQVG 145 Query: 139 IAQT----KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 T LA+ + + R +L+ LPV+ + + Sbjct: 146 CGPTAHGAAWLARQPLRRT--RRGVVRPGRRAVGMARLHRLLDRLPVEALHTL--ADPAW 201 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 LD +G +T+ ++ + + L + + GE + F +F Sbjct: 202 LDGIGCRTLGEVRRLPRAGLTRRLGPALLARLDQAYGEAPARFIWFVAPP-------AFA 254 Query: 255 ERITDYPSMRQAICSYAARAAEK---------LRSEHQYCRFISTFIKTSPFALNEPYYG 305 +R+ + A A A++ + R + ++ + G Sbjct: 255 QRMDLPGRIESAEGVLAG--AQRLLLALAGWLAVQQAGVTRCV-LVLEHERYRRGAATEG 311 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNA 365 + L P++D + LD + + + + LF + Sbjct: 312 TPVPLGLAQPSRDPAHLSRLLREKLDKL-SFHAPVTGLALRVEAMAACVPQSDALFPEPG 370 Query: 366 PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 P E L ++DTL A+ GR + + +RA Sbjct: 371 GTP--EDLGRLLDTLMARLGRDNVLQPRPLADHR--PERANR 408 >UniRef50_B0KIZ4 Putative uncharacterized protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIZ4_PSEPG Length = 167 Score = 62.0 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 1/93 (1%) Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 S I+T F +E Y N V+L PT DSR + AA ++ +++ G RY A V+L Sbjct: 34 SLSIRTGMFNPDEAKYANGVLVELPYPTDDSRLLTKAAQEGVERVFREGFRYSTAEVLLL 93 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 D +L A SE+LM V+D +N Sbjct: 94 DLSQPIEITGDL-SATAQPVASEKLMGVLDAVN 125 >UniRef50_B8KRW4 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KRW4_9GAMM Length = 474 Score = 62.0 bits (150), Expect = 4e-08, Method: Composition-based stats. Identities = 60/371 (16%), Positives = 115/371 (30%), Gaps = 30/371 (8%) Query: 25 KPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRV 84 +PVVV VI N A GV+ + L + A M ++ Sbjct: 23 QPVVVFDRER--VICANDPALERGVRPQQNTATVRSLLNEEQGHLLERDTTAEATMLKQL 80 Query: 85 MSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 ++ ++P + IY D ++ G L IR +LQR ++ + IA+T+ Sbjct: 81 LAWGYGITPTLMIYRDDCLLLEIGGSLTLFHGLDTLLDLIRQALLQR-QVSCAMAIAETQ 139 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 A L HA + L + + LP+ + +I+ + GI+ Sbjct: 140 PGAWLLTHAE--------PTLALDCRRPLNERIGVLPIALIPDFTHQITG-FERAGIRYF 190 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS---FGERITDY 260 +L + + L R + +L G + + P R FG + Sbjct: 191 SELLALPAAALGRRGGEELLRWLDQLTGRREIPPVDHQPP----STFRDALWFGFEVRQQ 246 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSR 320 + A+ + L + + L + +V+ Sbjct: 247 QELHPALKTLLQGFCRFLTHTQLDTQTV------DWQLLRMSGDAQTLTVRSSEAHARWE 300 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + LD + A + + + +LF++ E L + D L Sbjct: 301 TWFELSCLRLDQLTIA-RDIEGVALAVDHLQPNQPLASDLFNNA---RNEEPLNNLTDRL 356 Query: 381 NAKEGRGTLYF 391 + G + Sbjct: 357 RGRLGLRAVTR 367 >UniRef50_D0AI08 UvrA protein (Fragment) n=3 Tax=Enterococcus faecium RepID=D0AI08_ENTFC Length = 133 Score = 61.6 bits (149), Expect = 5e-08, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 12/115 (10%) Query: 37 VIARNAEAKA-LGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SP 93 + A + EAK + LF + V LY + RV + + Sbjct: 8 IRASSPEAKKRYDITNVSRPRDLSQLFPKTSYV-VPPRMNLYIKRNMRVNNIFKRYVADE 66 Query: 94 RVEIYSIDEAFCDLTGVRNCRDLT--------DFGREIRATVLQRTHLTVGVGIA 140 + +Y IDE +T N F + I+ + + L VG+A Sbjct: 67 DLLMYPIDEPILKVTRSLNIFTTEGTRSQRRKKFVQMIQERIKEELGLIATVGVA 121 >UniRef50_B4SMM0 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=3 Tax=Stenotrophomonas RepID=B4SMM0_STRM5 Length = 469 Score = 61.2 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 59/389 (15%), Positives = 124/389 (31%), Gaps = 42/389 (10%) Query: 13 SCETVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 S +PD +P+V+ + A + A+A G++ G + L + + + Sbjct: 15 SV-LRLQPDPQ-RPLVLLQGPAQRRVLRAVSPSARAAGLRPGMLLSAAQVLVQDMHLHDY 72 Query: 71 SSNYELYADMSNRVMSTLE-ELSPRVEIYSID---EAFCDLTGVRNC-RDLTDFGREIRA 125 N E + +++++ S +V S+D ++ R D + +R Sbjct: 73 DPNAE---QHTRQLLASWAYAYSSQV---SLDFPHALVMEIGASRALFGDWLTIEKRLRN 126 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 L + A T A++ + G + ++ ++ LP + Sbjct: 127 E-LHELGFRHRLVAAPTAHAARVLANVH-----DGLG----IDAQQLPAALAQLP---LP 173 Query: 186 GIGRRISK--KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 G L G++T+ + + + + F+ + + + LRG P L + P Sbjct: 174 RCGLPSEAVTVLGRSGLRTLGAVLELPRDSLARRFSPEVLQQLDALRGLPTAPLRYYQPP 233 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 + F RI + + L C + ++ Sbjct: 234 DR-------FDARIEFEYEIESSQALLFPLRRLLLDLAAFLCSRDGGVQRFDLHFEHDLL 286 Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD 363 + ++ LL P +D + A ++A + + A +LFD Sbjct: 287 PASVLTIGLLAPERDPALLFEIARNRMEAFALPAGS-RALRLQAEQLPPFVPAARDLFDT 345 Query: 364 -NAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 A QL L A+ G + Sbjct: 346 RPAQAMPWNQLRE---RLRARLGDDAVQP 371 >UniRef50_Q7MLY1 Uncharacterized protein conserved in bacteria n=18 Tax=Vibrionales RepID=Q7MLY1_VIBVY Length = 467 Score = 61.2 bits (148), Expect = 7e-08, Method: Composition-based stats. Identities = 53/397 (13%), Positives = 123/397 (30%), Gaps = 42/397 (10%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+ V+ V+ N A G+ +G L + V+ + +L + Sbjct: 25 PLAVVHPQSHQVVQINDLASNAGLAVGMGLASAATLCSQLQVIV--YDEKLEHRKLKEIA 82 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFGREIRATVLQ-RTHLTVGVGIAQTK 143 L ++ + + + ++ + N L ++ + A + G + Sbjct: 83 QWLYFMTADLVLDPPSGLWVRVSHMLNLYQGLDNYWHTLSAHLATLAVSYHASTGFSP-- 140 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 AKL A + N + P+ + +KL +GI T Sbjct: 141 LSAKLLAKAGHP--------LISDNQTELLTKVKKHPLT-FSELKATTIEKLQRIGIHTF 191 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 L ++ + + F++ L + +L G+ ++ + P + + + + Sbjct: 192 DALLTLPLQELARRFDIELVNYIGKLTGQLKHPVDFYHPPSR-FKQELELLFELDNVQWL 250 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFI-------KTSPFALNEPYYGNSASVKLLTPT 316 + + + L ++ + + K F + Y + KL T Sbjct: 251 EKPLEKLFRQLESYLTIRNKTAHELQLTLFQRNDLSKAISFHSAQGEYRSQQWQKLSALT 310 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 +S + TR + + G +LF + +L ++ Sbjct: 311 LESTILQAPVTRLQLEVIREGEP--------------NAHPTDLFSHRTGQLSRLELYSL 356 Query: 377 MDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTT 413 + AK G ++ A G+ + ++A T Sbjct: 357 L---QAKLGADSI--ATLGLNHDPRPEKATRYQSTLT 388 >UniRef50_D0SUP5 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SUP5_ACILW Length = 78 Score = 60.9 bits (147), Expect = 9e-08, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 2/77 (2%) Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI-QQQWQMKRA 405 L + ++F D ++ LM ++ ++ + G+ L I ++W M R Sbjct: 3 LTCLEPKASYVYDMFTDMKHIELNDTLMDSLERIHVRYGKSKLALGASMIPNRRWNMSRD 62 Query: 406 MLSPRYTTRSSDLLRVK 422 L+ Y LL VK Sbjct: 63 RLTQNYF-MWDQLLVVK 78 >UniRef50_UPI0001BC2B48 hypothetical protein BlinB_00220 n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2B48 Length = 568 Score = 60.1 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 58/284 (20%), Positives = 96/284 (33%), Gaps = 25/284 (8%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 A+ E F P PV VLS V+A NA A+A G+ +G+ + Sbjct: 35 AATEHEFSPR---TPVAVLSGGK--VVAANAPARAAGIALGNNKRAVGYRCPEAQ--VVA 87 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQ 129 N E + + LEEL R + S L +++ + + I A V Sbjct: 88 WNEETDNRHFSAGVGALEELVARFTLLSPGTLAIPLDSLKHGYADEPSAVEALISALV-A 146 Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR 189 T GIA T A LA G + ++A P+ + G Sbjct: 147 ATGWEFFPGIADTVFAAVLAA-----------GQARRVEPGETAEFLAAQPISTLEYAGA 195 Query: 190 RISK---KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQE 246 ++ +G++T+ DLA D+R + F + + G L + ++ Sbjct: 196 GATELIDTFTQLGLRTLGDLAGIDVRAVNSRFGTLGKHAHDLATGVEWAPLNDHVREEK- 254 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + E T ++ AA +R C I+ Sbjct: 255 LTVELGLDEPTTRSDTLGFLTRQLAADLLTTVRRRGLVCTQITI 298 >UniRef50_UPI0001C37F78 hypothetical protein RflaF_16051 n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37F78 Length = 95 Score = 60.1 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 27/71 (38%) Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPG 369 +KL T + I A + + G+ + G+ L D + QL+ FDD Sbjct: 1 MKLSQTTCSIKKIQAAFEKLFIEKIKIGYGIMQIGISLTDLTYEPDMQLSFFDDPEDDEK 60 Query: 370 SEQLMTVMDTL 380 + + M + Sbjct: 61 EKNIEVAMIDI 71 >UniRef50_Q6MQS5 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQS5_BDEBA Length = 420 Score = 59.7 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 35/282 (12%), Positives = 88/282 (31%), Gaps = 29/282 (10%) Query: 104 FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK----TLAKL----ANHAAKK 155 F D+ ++ E + + IA T LAK + K+ Sbjct: 16 FVDIGSTQHLMGGEIGCLEKALQIAAKFAPDASAAIADTPAGAQMLAKWRPSHISLRGKE 75 Query: 156 WQRQTGGVVD-LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + G +D L +LE PV+ + +G+ + + + + + Sbjct: 76 QESFKGLGLDALKDLEGLSPWAQKKPVEH-------MIAFFHTLGVYGLEGVLNFRLNSL 128 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 R+ + L + + P + + + P + + + Sbjct: 129 RERWGDFGVLLWNRLHSQDSQVISPLVPRDPLVGYGY-LDDPLGSAPLLMNRLKVHLDIL 187 Query: 275 AEKLRSEHQYCRFISTFIK--TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 +L+ ++ + + + S + S++ ++PT+D + + L+ Sbjct: 188 FARLQGLARHAQRLDVVLHCEYSD-------KRYNLSIEPVSPTRDQELFEDLLFKKLEQ 240 Query: 333 IWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP-GSEQL 373 ++ + L D + + QL+ F+ +L Sbjct: 241 QVLEN-PIREFEITLFD-VPEKIQQLDFFEPRDNTEDRWRRL 280 >UniRef50_B4UDR0 Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. K RepID=B4UDR0_ANASK Length = 569 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 53/211 (25%), Gaps = 35/211 (16%) Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 +L A+G+ LA + F R R RGE L P + Sbjct: 210 RLAAVGVGDAGALARLPEGTLAHRFGPEGVRAARLARGEDVSPLVPHVPE--------TL 261 Query: 254 GE-------RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 + + + A R A +L + + +P Sbjct: 262 PQESLELEAPAESAEPLLFGLKRLADRVAARLAGRGLGATRLRLVL------ALDPRGEE 315 Query: 307 SASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-----FSQGVAQLNLF 361 V L P+ + + L A+ G V QL Sbjct: 316 RIQVPLSQPSASAARWLVPVKEHLFALRLPGA------VTALRLVAAEVAPVAAEQLAF- 368 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 L V+ L + G G L+ A Sbjct: 369 --GDRPEAVAALEGVLARLAVRLGDGALFAA 397 >UniRef50_Q5JTF2 Polymerase (DNA directed), eta (Fragment) n=5 Tax=Coelomata RepID=Q5JTF2_HUMAN Length = 72 Score = 59.3 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 6/67 (8%) Query: 53 DPWFKQKDLFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 K L + +N Y + S VM + + +E SIDEA+ DL Sbjct: 1 MWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDL 59 Query: 108 TGVRNCR 114 T R Sbjct: 60 TSAVQER 66 >UniRef50_UPI0001693F66 DNA polymerase IV n=2 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693F66 Length = 83 Score = 59.3 bits (143), Expect = 3e-07, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 20/62 (32%), Gaps = 9/62 (14%) Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 W G +K V L + QL F+D L +D + + G + Sbjct: 2 LFKKHWD-GLPVRKISVSLEELVRDDTMQLTFFED--------ALEKALDDIKDRFGNAS 52 Query: 389 LY 390 + Sbjct: 53 VM 54 >UniRef50_Q01QX1 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01QX1_SOLUE Length = 395 Score = 58.9 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 67/222 (30%), Gaps = 18/222 (8%) Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRR--ISKKLDAMGIKTVLDLADTDIRFIRKHFNVV 221 V L + K + L + + + + L+ GI++ + I + Sbjct: 62 VSLIPYGDEGKFLGTLSLAVL---APSADLVETLERWGIRSFHQMGALPPLGIAERLGAE 118 Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 R RGE +L + + + A +L + Sbjct: 119 GMRLRELARGEAERKLLPIPEPL-TFEDELELEYPVELLEPLAFLLARLINGLATRLATR 177 Query: 282 HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQ 341 + +K L+E +++L P+ D++ + L+A A Sbjct: 178 ALATDELRLRLKLENRGLHE------RTLRLPVPSLDTKAFLKLLQLDLEAHPPAAPIVH 231 Query: 342 K-AGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 GV + AQ LF AP P +L + + A Sbjct: 232 LWMGV---NPVKPQSAQTGLFIPVAPEP--VKLELTLARIQA 268 >UniRef50_B9QVQ0 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QVQ0_9RHOB Length = 523 Score = 58.2 bits (140), Expect = 6e-07, Method: Composition-based stats. Identities = 58/372 (15%), Positives = 112/372 (30%), Gaps = 51/372 (13%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 +++ N A+A G+++G+ + ++C ++ E + V +P V Sbjct: 10 IVSMNDTARACGLRLGEAEADARARIPH--LLCEDADPEKDTALLGAVADWCARYTPLVA 67 Query: 97 IYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 + D F D+TG + + ++ + + V AA Sbjct: 68 LDGKDGLFLDITGCAHLFKGEE--ALLKDALERLHRQGFCV-----AGAIAGTAGAAWAL 120 Query: 157 QRQTGGVVDLSNLERQRKL--------MSALPVDDVWGIGRRISKKLDAMGIKTVLDLAD 208 R G V + ERQ +S+ V + +G + + L D Sbjct: 121 ARYGSGGVLADSQERQALAPLPLAALRVSSEAVSGLNQVGLKT-----------IGQLYD 169 Query: 209 TDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAIC 268 + L + + G + I R F + I+ ++ Sbjct: 170 RPRAPLTNRLGADLILRLDQALGWQGEAISP-RFEAPLISAERRFFDPISQLDDVKAVAL 228 Query: 269 SYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 S A +AA+ L + R + F ++ A K T R Sbjct: 229 SLAGQAAKALERRVEGGRVFELSL----FRVDG------AVQKFRVGTSSPLRDPKRVLR 278 Query: 329 SLDAIWQA---------GHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 +A G+ + V++ D Q L N + L ++D Sbjct: 279 LFAEKLKADEGAIDAGFGYDLVRLDVLVAD--KAPAVQSAL-TANGAVEANASLDDLVDR 335 Query: 380 LNAKEGRGTLYF 391 L A+ G + Sbjct: 336 LGARLGSERVTR 347 >UniRef50_B5JUJ6 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUJ6_9GAMM Length = 312 Score = 57.8 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 28/222 (12%), Positives = 68/222 (30%), Gaps = 11/222 (4%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIA 140 RV + ++ EI E DL+ + ++ + + G+A Sbjct: 40 ARVQADIKGF-ENYEILGNGEVLFDLSRQQREFCSPVQMAEQLTMQLQGYLGGELSTGLA 98 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 A A + + L ++++S P++ + + +S L +G Sbjct: 99 ADALTAIYAARQ-------SSSGLSLVPAWDAQRVLSGAPIECLDSVLSGVSTLLKGLGY 151 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 ++V L + + + + RG+ Q + + R D Sbjct: 152 QSVGQLGQQRDQVLTYRYGELGRAIQLLARGQSVPQQYWYKSPPLSVSVKGRLSRR--DG 209 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 I + + +++ + + F + S +P Sbjct: 210 EQASHRINALKEKVSQRYARLGFSAKRWTLFFRRSTETHFQP 251 >UniRef50_C1AAH6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAH6_GEMAT Length = 596 Score = 57.8 bits (139), Expect = 8e-07, Method: Composition-based stats. Identities = 19/159 (11%), Positives = 48/159 (30%), Gaps = 2/159 (1%) Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVL 222 + R ++ P+ V + + L A+G++TV LA + + + + Sbjct: 171 YITCIPSGRCAHYLAPAPLGLVPM-ASELREALQALGLRTVGALAALEASDVEERWGHEG 229 Query: 223 ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH 282 R +G+ + + + + + + R + + Sbjct: 230 LGAWRLAQGDDPRRPGLTRVDM-SRSATVELPNAVHSAEPVLFVVRAQLQRLVQDCVRDG 288 Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD 321 + +S + S +TPT+ R+ Sbjct: 289 RAAAAVSITLVLDAGRQYPIEDIGSEWADDMTPTRSVRE 327 >UniRef50_B9ZJT1 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJT1_9GAMM Length = 478 Score = 57.4 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 49/362 (13%), Positives = 104/362 (28%), Gaps = 27/362 (7%) Query: 52 GDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE--AFCDLTG 109 G + +V + + + L + S V D ++ Sbjct: 54 GMALADALAILDTPELV--EHDPQAQTAQIAMLAGVLLQFSDHVHP-EPDARRILLEVGR 110 Query: 110 VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 R RE L+ +G+A++ A+L + + Sbjct: 111 SRRLFGGLAVLREQARETLEGLGFHPRIGVARSPAAARLLATLRNPAIPE--------DA 162 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 E R+ +S +P++ + + + L A G++ + DL + + L + L Sbjct: 163 EALRRTLSPVPLEALP-LPAATREGLRATGLRQLGDLLRLSRPELARRHGPELLALLDRL 221 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G L F P E+ I ++ + +A +LR ++ + ++ Sbjct: 222 LGRRTETLPRFNPPP-ELDLPLRLEHEIHTTGALAFPLKRLLRQAEAQLRGLNRSLQGMT 280 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 +K + +D + L+ + Sbjct: 281 LELK---HREVHTRITLERGHPGIRA-EDWLPLWQTR---LEREALPA-PVIGLRLRATQ 332 Query: 350 FFSQGVAQLNLFDDNAPR-PGSEQLMTVMDTLNAKEGRGTLYFA-GQGIQQQWQMK--RA 405 +L + P QL V+ L+A+ G + GI + + R Sbjct: 333 LLDPPAEGASLLAEAPGHPPPESQLPAVLARLSARLGEQAIVRLTASGIPRPEAAQGARN 392 Query: 406 ML 407 L Sbjct: 393 DL 394 >UniRef50_Q6F8Y8 Fragment of component of DNA polymerase V (UmuC) (Part 2) pseudogene n=2 Tax=Acinetobacter RepID=Q6F8Y8_ACIAD Length = 64 Score = 57.4 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 21/35 (60%), Positives = 27/35 (77%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG 35 +FAL D+N Y SCE +F P L G+PV+VLS+NDG Sbjct: 19 IFALIDINNAYVSCERIFEPKLNGRPVIVLSSNDG 53 >UniRef50_A1S6R3 Putative uncharacterized protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6R3_SHEAM Length = 763 Score = 57.0 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 86/305 (28%), Gaps = 42/305 (13%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRV- 84 P+++ V+ +A + GV G L V F + L+ S+ + Sbjct: 27 PLILYDVAKARVLKACPQAASAGVMAGQSMGSAAQLCPE--VQPFPFDLSLHRQGSDWLC 84 Query: 85 ---MSTLEELSPRVEIYSI-----DEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVG 136 S L P E ++ D + + + A L+ L Sbjct: 85 RHGYSFSARLVPPPEPDTLFARCHDVLLLETGSMAKLFGGEAALAKALAAALE--GLNCS 142 Query: 137 VGIAQ------------------TKTL----AKLANHAAK-KWQRQTGGVVDLSNL---- 169 +A +KTL AK A + K ++ Sbjct: 143 FAMAFAATPLAAGVLAKAQPCLVSKTLQPMFAKAATLQSALKVSASKSASKAIAEPKSAA 202 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 E + +SALP+ + + + +L+ MG++ + L + F + L Sbjct: 203 EDLSRQLSALPISTLP-VPEALLSRLEGMGLEHIGALQALPAAELGIRFGPEFVLLLARL 261 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G + P + E ++ + A A LR + Sbjct: 262 NGNQPHPQSFYCPQE-EYCQRIELMYEAESLNALVFVLGRMFAELALFLRQRQLAVSMLE 320 Query: 290 TFIKT 294 + Sbjct: 321 LVLHY 325 >UniRef50_Q1N4J7 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N4J7_9GAMM Length = 480 Score = 56.6 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 56/376 (14%), Positives = 115/376 (30%), Gaps = 37/376 (9%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 + V+++S ++ N+ A +K+G L + + E + R Sbjct: 23 DQAVIMVSEQHHKIVQLNSVALEKELKIGMGLATAASLC--HDIQVLIYDEEKESKHLKR 80 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + L ++ + +Y + + + + L H V + T Sbjct: 81 IARWLYSVTADIGLYPPNGIVLRVDSMLHLYSDLKHYWHAVQQQLAHCHAQVHSAMGVTP 140 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 A+L + + + +Q L +L D+ + KL +G+ TV Sbjct: 141 LAARLLARTQ---TQPRPQISMDTKKLKQIALSKSLSDADIH---AKTRFKLSRLGLNTV 194 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ---------EIICSRSFG 254 D+A + K F L +++L GE ++ + P KQ EI S+ Sbjct: 195 ADIAKIPRAELAKRFGHELAIYLQKLLGEIQDPIQFYIPNKQFQEYVELAYEISNSQYLI 254 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 + + Q L+ + C I+ ++ ++ + L Sbjct: 255 KPLQRLLLRLQYF----------LQQNNARCSEITLQLEHREEKATIEQIASAEPITLAE 304 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 Q I + H + +Q A+ +LF +L Sbjct: 305 KWQSLCAIKFENLKL-------KHPVIGITLTANKQSTQQSARGDLFSKKQNAMSENEL- 356 Query: 375 TVMDTLNAKEGRGTLY 390 + L K G + Sbjct: 357 --ISHLKIKLGDDRVL 370 >UniRef50_B8K9K1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K9K1_VIBPA Length = 466 Score = 55.8 bits (134), Expect = 3e-06, Method: Composition-based stats. Identities = 58/422 (13%), Positives = 138/422 (32%), Gaps = 73/422 (17%) Query: 1 MFAL---CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFK 57 ++ ++A YA E +P++++ V+ RNA AK G+ +G Sbjct: 5 IYLHFPTLQLDALYA--EQSE------QPLIIVEGKRFQVVQRNALAKEQGIDLGMGLGS 56 Query: 58 QKDLFRRCGVVCFSSNYELYAD--MSNRVMST---LEELSPRVEIYSIDEAFCDLTGVRN 112 L ++ V Y + ++ L ++ + ++ T + + Sbjct: 57 ASALCQQLQV-------HPYDESVEHKTLLDIAQWLYMVTSDIALFPPQGILLKATDMLS 109 Query: 113 CRDLTD--FGREIRATVLQRTHLTVGVGIAQT--KTLAKLANHAAKKWQRQTGGVVDLSN 168 + R + G + LAK + G + Sbjct: 110 LYGGLKAYWQHVFRHLSTLKLTFHFATGFSPFSAMLLAK------------SEGQFICHD 157 Query: 169 LERQRKLMSALPV--DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 + + + P+ ++ + + L +G+ + L + ++ I + F++ L V Sbjct: 158 KDEIIQRLQRYPLIATELD---PKQVETLSRVGVTHLHQLLELPMQDIARRFDIDLVNYV 214 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS----EH 282 L G+ ++ + P +Q +S+ E + D + Q + + KL + Sbjct: 215 GRLMGQFKHPMDFYHPPEQ----FQSYLELLFDIEHI-QWLEKPLGKLLNKLEIFLTLRN 269 Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD--SRDIINAATRSLDAIWQAGHRY 340 Q ++ + + SV + + D + + +L++I + Sbjct: 270 QVGYELALTLHQRDHQDS--------SVTFTSASGDYLAHRWMTLCQLTLESI-KLEAPV 320 Query: 341 QKAGVML---GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 Q + L G+ S ++F + + +L + L AK G + Sbjct: 321 QGLTLSLIRGGELESSSK---DIFAGHQGQQSELEL---IGLLQAKLGHERVRKVAMSDD 374 Query: 398 QQ 399 + Sbjct: 375 PR 376 >UniRef50_C1RL95 Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RL95_9CELL Length = 445 Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 28/109 (25%), Gaps = 1/109 (0%) Query: 190 RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 R+ L +G++T+ A + F + RG P + Sbjct: 52 RLVDLLHRLGLRTLGAFAALPAPDVHARFGRLGSWARTLARGLDERPPARRRPEAD-LEV 110 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + A A +L + C + +T Sbjct: 111 DVELDPPVDRVDTATFAGRRLAEELHAELVARSVTCGRLQITARTDDGT 159 >UniRef50_A9AEV1 Nucleotidyltransferase/DNA polymerase n=45 Tax=cellular organisms RepID=A9AEV1_BURM1 Length = 495 Score = 54.7 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 105/355 (29%), Gaps = 34/355 (9%) Query: 35 GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR 94 G V+ +A A+ GV+ G L +V + AD V L SP Sbjct: 37 GVVLIADAAARRQGVRAGMKRGGVLTLAPDTQLV--ERDPAREADALRAVALALLRFSPN 94 Query: 95 VEIYSIDEAFC--DLTGVRNC-RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 V + DEA D+ L R++RAT L + A T A L Sbjct: 95 VALA--DEATLVVDVGPSLRLFGGLPSLCRQVRAT-LAALGYAARMSAAPTAGGAWLLAR 151 Query: 152 AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI 211 A+ + ++ + + ALP + R + D +G +T+ DL Sbjct: 152 AS----ARVRSRRRVARRASLVRALDALPCVLLPD-ARPYAGWFDGLGCRTLADLRGLPR 206 Query: 212 RFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYA 271 + +++ L + G+ L A F R+ + A Sbjct: 207 KGLQRRCGPALLAALDRAYGDAVEPLAWMAVPP-------VFDVRLELAERVDYA--EAV 257 Query: 272 ARAAEKLRSEH---QYCRFISTFIKTSPFALNEPYYGN---SASVKLLTPTQDSRDIINA 325 A +L + R +S T S + P +D + Sbjct: 258 LFVARRLVVQLCGWLAARQLSLAAMTFDLEHERGRQAVPPTSLELAFAAPVRDEAHFMRL 317 Query: 326 ATRSLDAIWQAG--HRYQKAGVMLGDFFSQGVAQLNLFDDN-APRPGSEQLMTVM 377 L + + + +LF + + +L+ ++ Sbjct: 318 LGERLARVELPAAVIAVRLKATRVESVAPPAD---DLFPEPGGTKETRARLLELL 369 >UniRef50_C5BND7 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BND7_TERTT Length = 513 Score = 54.7 bits (131), Expect = 7e-06, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 83/283 (29%), Gaps = 45/283 (15%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 V+ + A A G++ G P L + V ++ L N + L +P + Sbjct: 39 VLCASKPAVADGIRAGMPAATA-QLLGQHQQV--ERDFALETTALNALADRLYMFTPHLT 95 Query: 97 IYSIDEAFC------DLTGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLA 149 A +++ LT +++ L T + +G+ T A L Sbjct: 96 PLQP-AAHLQAGILAEISRSLALFKGLTTLVEQLK-ENLADTGYELALGLGHTDLCAWLL 153 Query: 150 NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK------------LDA 197 + + + Q + ++ L V V +G + L+ Sbjct: 154 SWS--PTPQPIQHYT-------QSQFIAQLDVMPVRQLGECHCAQLPYTQLQNRIDDLEK 204 Query: 198 MGIKTVLDLAD----TDIRFIRKHFNVVLERTVRELRGEPCL--------QLEEFAPTKQ 245 G T+ DL + +R+ + + ++ G +Q Sbjct: 205 SGFNTIADLTRQIGNQNTSSLRRRWGGEFCGLLSQVLGIEHSLQQTRLFATPLPQYQPEQ 264 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 S F + + Q + L ++ C+ + Sbjct: 265 FFYDSIQFDYPLQTVEQLLQPMEYLLNNLQRYLNNQQLQCQKV 307 >UniRef50_Q15ZX1 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15ZX1_PSEA6 Length = 484 Score = 53.9 bits (129), Expect = 1e-05, Method: Composition-based stats. Identities = 37/221 (16%), Positives = 78/221 (35%), Gaps = 18/221 (8%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+V+L G V N A+ G++ L G+ N E+ + + Sbjct: 43 PIVILDTAHGIVQ-LNKCARQAGIQPFMSLGTAAAL--HGGLQVMPFNPEIEKQQLSIIA 99 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKT 144 L + + +S + + L + I++ ++ +++ + Sbjct: 100 QRLYMVVSDICFFSEQGLLLRVHNMLRLYSSLNELWSMIKSQLVP-LNVSFSYATGHSPL 158 Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS--ALPVDDVWGIGRRISKKLDAMGIKT 202 AKL K W + T + + L + ++ + KL+++G+KT Sbjct: 159 AAKLLA--VKGWNQITD------EPAAIQHALKKVDLSLTELS---SKDVTKLNSIGVKT 207 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 V L + K F+ + + +LRG+ + F P Sbjct: 208 VEQLLIIPFSDLHKRFDTQMITYLGQLRGDFKHPVIFFHPQ 248 >UniRef50_B8IQT5 Putative uncharacterized protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IQT5_METNO Length = 93 Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Query: 381 NAKEGRGTLYFAGQGI--QQQWQMKRAMLSPRYTTRSSDLLRV 421 NA+ GRG + A G+ ++ W + M +PRYTTR +L V Sbjct: 46 NARFGRGAVVPARAGLVDKRTWSTRFEMRTPRYTTRPDELPVV 88 >UniRef50_B9K728 Nuclease (RecB family)-like protein n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9K728_THENN Length = 400 Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 2/78 (2%) Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVR 227 + ++KL+ + V GIG + L MGI+T+ DL++ D R + K F R + Sbjct: 165 EDCEKKLLERKSLLLVNGIGEETRRILYEMGIETIEDLSNADQRAMEKIFGKEKGRRFIL 224 Query: 228 ELRG-EPCLQLEEFAPTK 244 R + P + Sbjct: 225 AARAFLEDRVIVIEPPER 242 >UniRef50_UPI0001903F04 DNA polymerase IV n=1 Tax=Rhizobium etli 8C-3 RepID=UPI0001903F04 Length = 86 Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 9/79 (11%) Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 + ++ IK + F + S + T + ++ + L I+ + G Sbjct: 12 AKTVTLKIKYADFN------QITRSKTVPTLLRGITELEEIISLMLAPIFPPRKSIRLLG 65 Query: 345 VMLGDFFSQGVA---QLNL 360 + L + QL L Sbjct: 66 ITLSSLERRASRTEPQLQL 84 >UniRef50_C2FQ54 Putative uncharacterized protein n=1 Tax=Lactobacillus plantarum subsp. plantarum ATCC 14917 RepID=C2FQ54_LACPL Length = 56 Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 17/54 (31%), Gaps = 1/54 (1%) Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 W G + V QL+LF + QL V+D ++ Sbjct: 1 MFRKNWD-GQAVRNIAVYSNKLSPDTGQQLDLFSQPTQQIRHNQLNRVIDDIHQ 53 >UniRef50_Q3SEZ7 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SEZ7_THIDA Length = 467 Score = 51.6 bits (123), Expect = 5e-05, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 82/288 (28%), Gaps = 39/288 (13%) Query: 13 SCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 S E R P+ V+ N VIARN A GV+ G + L +V Sbjct: 12 SLEVFTRGSASALPLAVVEKQGNRTWVIARNDPAAERGVRPGMAASAAQAL--ADELVVR 69 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQ- 129 + + + +P V + + D ++ D +RA V + Sbjct: 70 QRDPGDEQAALTGLAAWAGRFTPSVSLQAPDGLLLEVGTCLTLHRGLD---NLRARVREG 126 Query: 130 --RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD--DVW 185 + A T A L G + ++ LPV D+ Sbjct: 127 VDAMAYSATSACAPTALGAWLLA---------QAGEETAVDANALEARLARLPVGLLDLS 177 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ 245 + LD +G T+ D + + + L + G FAP + Sbjct: 178 ---PDTRESLDLVGAHTLGDCLKLPRAGLARRYGQGLLDQLDRALGRLPEPRAFFAPPPR 234 Query: 246 EIICSRSFGERITDYPSMR--QAICSYAARA------AEKLRSEHQYC 285 F R+ + +A+ A R LR Sbjct: 235 -------FERRLELPAPVEHAEALLFVARRLLPELEGYLALRQAGVQA 275 >UniRef50_C9M121 ImpB/MucB/SamB family protein n=1 Tax=Lactobacillus helveticus DSM 20075 RepID=C9M121_LACHE Length = 169 Score = 51.2 bits (122), Expect = 8e-05, Method: Composition-based stats. Identities = 17/112 (15%), Positives = 34/112 (30%), Gaps = 15/112 (13%) Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 K++ S+ T ++ + A + A +LR +S I + A Sbjct: 2 KKDYDNSQVLMCDYTQAKEIKVVLSEIADQVAGRLRHHQVQGEVVSVRIDYAD-AEEAGT 60 Query: 304 YGNSASVKLLTPTQDSRDII-------------NAATRSLDAIWQAGHRYQK 342 G +K+ PT + D+ + + Y+K Sbjct: 61 SGFGVQMKI-YPTNHTDDLSPKKRPHIQPYNSCRTIWHIMHELGIQSTMYRK 111 >UniRef50_UPI000180D06C PREDICTED: similar to REV1-like n=1 Tax=Ciona intestinalis RepID=UPI000180D06C Length = 404 Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 18/55 (32%) Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 ++T+ F + S S L T D I + ++ + G+ Sbjct: 9 VETAKFKGHGVCNSISRSKNLNEYTDDCDIIGREGITLMKSLQLNVTDLRGIGIQ 63 >UniRef50_Q1CC71 Error-prone repair protein UmuC n=9 Tax=Yersinia pestis RepID=Q1CC71_YERPN Length = 48 Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 15/29 (51%), Positives = 20/29 (68%) Query: 394 QGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 +G+ +W +KR MLSP YTTR S+L K Sbjct: 19 EGVASEWHIKREMLSPAYTTRWSELPIAK 47 >UniRef50_A7NMG2 Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NMG2_ROSCS Length = 437 Score = 50.1 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 23/64 (35%) Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + + GIG I+++L GI T LA + E+ VR E L Sbjct: 109 DLQQIPGIGPAIARRLRTAGITTFAALAACSPSDLAAWTGRSAEQIVRMGWIERARDLTH 168 Query: 240 FAPT 243 P Sbjct: 169 PTPP 172 >UniRef50_B0TUJ6 Putative uncharacterized protein n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TUJ6_SHEHH Length = 50 Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 22/37 (59%) Query: 386 RGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 + L + I +W M+R ML+P+YTTR D+ +K Sbjct: 13 KRALIKMAKWISLKWGMRREMLTPQYTTRWKDIPLIK 49 >UniRef50_A5UTK6 Putative uncharacterized protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UTK6_ROSS1 Length = 431 Score = 48.1 bits (114), Expect = 5e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 26/63 (41%) Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 +E + + + GIG I+++L A GI T +A + +H E+ VR Sbjct: 169 PVEPAAERFHQDDLQQIPGIGPAIARRLHAAGISTFAAVAACTPAELARHTGRSAEQIVR 228 Query: 228 ELR 230 Sbjct: 229 MGW 231 >UniRef50_A1RYZ3 Rad51-like protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RYZ3_THEPD Length = 315 Score = 47.8 bits (113), Expect = 8e-04, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 6/70 (8%) Query: 178 ALPVDDVW---GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE---RTVRELRG 231 +P++++ GIGR +L + GI+TV DL + + + + E R VR R Sbjct: 2 PIPIEELGKEEGIGRVTISRLKSAGIETVEDLVLYNPEELEELAGIDFERALRLVRTARR 61 Query: 232 EPCLQLEEFA 241 ++ Sbjct: 62 LAGWEVRAVR 71 >UniRef50_A1WXU5 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXU5_HALHL Length = 432 Score = 47.8 bits (113), Expect = 9e-04, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 89/306 (29%), Gaps = 28/306 (9%) Query: 99 SIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLT-VGVGIAQTKTLAKLANHAAKKWQ 157 D F ++ G + ++ L+ + A T A+L A Sbjct: 49 PPDTVFLEVGGSQRLFGGRAAIQQRAQEGLRELGQPRAALAAAPTPQGARLLARA----- 103 Query: 158 RQTGGVVDLSNLERQRKLMSALPVDDV-WGIGRRISKKLDAMGIKTVLDLADTDIRFIRK 216 + G+ L++ + R+ + LP + L +G+ + D +R+ Sbjct: 104 --SPGIW-LTDRQSLRRALMPLPCHLLDPT--PAQQSALSTLGLTRLGDCLRMPRSGLRR 158 Query: 217 HFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 RT+ + GE P ++ + A+ Sbjct: 159 RIGDPPIRTLEQALGERPEPRRCIPPPQRYRGR-LELPAPTAATQATGFALQRLLRALVG 217 Query: 277 KLRSEHQYCRFISTFIKTSPFALNEPYYGNSA-SVKLLTPTQDSRDIINAATRSLDAIWQ 335 LR I+ + AL P ++ ++ L PT+D + + A L+ Sbjct: 218 MLR--GLDAG-----IQQAAVALEHPDGPDTRLTLGFLRPTRDLEHMAHIARHRLERQAL 270 Query: 336 AG--HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 + +LF+ E + T+ + L A+ G + Sbjct: 271 PDVATAVRL---EADQLLPYQGTSGDLFERTGADG--EAVRTLSERLIARLGADCVQRLA 325 Query: 394 QGIQQQ 399 + Sbjct: 326 TYPDPR 331 >UniRef50_D1REI8 Putative uncharacterized protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1REI8_LEGLO Length = 1277 Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 9/93 (9%) Query: 157 QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRK 216 + G + ++ + L + PV + G+ + + L+ +GIKT+ DLA + I Sbjct: 2 GYRDGLKFQFTKMDALQAL--SQPVSTLLGVSNQTEQTLNKLGIKTIYDLATCPLFLI-- 57 Query: 217 HFNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 + GE + II Sbjct: 58 -----AQDIASAANGEGHSIIARSGRISSSIIN 85 >UniRef50_Q14N06 Hypothetical transmembrane protein n=1 Tax=Spiroplasma citri RepID=Q14N06_SPICI Length = 133 Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 29/108 (26%), Gaps = 15/108 (13%) Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 I K + + + T DI + A + W +G + Sbjct: 1 MIGNVIYVTFKNAN------RKCFTKQQIIKKYTNFLDDIYSVAIILFEQFW-SGQPIRL 53 Query: 343 AGVMLGDFFS------QGVAQLNL--FDDNAPRPGSEQLMTVMDTLNA 382 GV L QL+ P + +L + ++ + Sbjct: 54 IGVGLRGIIRGIISKYDLKEQLSFESLGTLQPDTVTNKLTNKIYSIRS 101 >UniRef50_A3WNS1 DinP DNA polymerase-like protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WNS1_9GAMM Length = 471 Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 65/223 (29%), Gaps = 17/223 (7%) Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 + LP+ + + +I K+L + GI + L I K F + ++ L+ Sbjct: 165 VIEHELGHLPIKQLL-LSSQIEKRLLSTGIHQLKQLWSLSAADIGKRFGAGMVDDIQRLK 223 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G + F P + I I + M + + L + R ++ Sbjct: 224 GNESQAFDFFRP-RDAFITQLDLVTEIQHWQGMLFPLKRLLQELEQFLYQRQKVIRQLTI 282 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD---AIWQAGHRYQKAGVML 347 ++ SV L + R + L + + Sbjct: 283 ELQHRDMEPT--------SVPLKLASDSWR--ASEFLNLLQLQMNRYPLTAPVIAIEMRA 332 Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 + F +L + + ++ L A+ G +Y Sbjct: 333 LELFELTRDSGSLL--TKGVAHQQTVTELVSRLQARLGEKAVY 373 >UniRef50_Q5P4A3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4A3_AZOSE Length = 475 Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 35/236 (14%), Positives = 76/236 (32%), Gaps = 23/236 (9%) Query: 176 MSALPVDDV----WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + ALP++ + + + L +G++ + +LA + + V+ TV RG Sbjct: 166 LDALPIELLADGAP-VPPATLELLRGVGVRRIGELARLPRDGLARRDASVVTDTVARARG 224 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL--RSEHQYCRFIS 289 F P ++ + +R A + A L R C + Sbjct: 225 REPDPRPRFVPAERFASR-LVLPASVAHTEPLRFAAGRLFSNLAAWLAARQAGLDCCRLH 283 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 ++ + P +D+ + A+ L A+ + + Sbjct: 284 L--------EHDCAPATVVEIVTGRPQRDAARFVQLASEHLAALVLPA-PVEALRLTADT 334 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF----AGQGIQQQWQ 401 + +LF E + ++D L+A+ GR + A ++ W+ Sbjct: 335 PVALPAGTPDLFGG--KDDAREAALRLLDRLHARLGRDAVRTVLPVADHRPERAWR 388 >UniRef50_Q2IIA1 Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IIA1_ANADE Length = 551 Score = 46.6 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 46/197 (23%), Gaps = 35/197 (17%) Query: 208 DTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS----- 262 + F R R RGE L P + + + + Sbjct: 222 RLPEGTLAHRFGPEGVRAARLARGEDASPLVPHVPE--------TLPQESLELEAPAEGA 273 Query: 263 --MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSR 320 + + A R A +L + + +P V L P+ + Sbjct: 274 EPLLFGLKRLADRVAARLAGRGLGATRLRLVL------ALDPRGEERIQVPLSQPSASAA 327 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDF-----FSQGVAQLNLFDDNAPRPGSEQLMT 375 + L + G V QL L Sbjct: 328 RWLVPVKEHLFTLRLPGA------VTALRLVAAEVAPVAAEQLAF---GDRPEAVAALDG 378 Query: 376 VMDTLNAKEGRGTLYFA 392 V+ L + G G L+ A Sbjct: 379 VLARLAVRLGDGALFAA 395 >UniRef50_Q14N05 Putative uncharacterized protein n=1 Tax=Spiroplasma citri RepID=Q14N05_SPICI Length = 74 Score = 46.2 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%) Query: 186 GIGRRISKKLDAMGIKTVLDLAD-TDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK 244 GIG++ + +L+ +GI T+ LA+ TDI + V G QL Sbjct: 2 GIGKQATHRLNEIGIHTIKVLAEFTDITTLEIILGKQAYGFVERANGGGKQQLSFEHNQL 61 Query: 245 Q 245 + Sbjct: 62 K 62 >UniRef50_C7P121 Putative uncharacterized protein n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7P121_HALMD Length = 157 Score = 45.4 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 24/47 (51%) Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + + + PV ++ G+G +++L+ GI TV +LA D + Sbjct: 90 EPTDEPSVDNDAPVTEIKGVGPAYAERLENAGISTVSELAAADADEL 136 >UniRef50_B1XYC2 Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XYC2_LEPCP Length = 547 Score = 45.4 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 59/392 (15%), Positives = 115/392 (29%), Gaps = 43/392 (10%) Query: 30 LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLE 89 +IA NA A+ALGV+ G + L + + + + A + R+ L Sbjct: 38 GGRTRTVLIA-NAAAQALGVQAGQRLGSAQALAPQA--LVLARDPAREAALLERLALGLG 94 Query: 90 ELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 LSP+ I D D+ L R V + + +A T A+L Sbjct: 95 SLSPQRVIEPPD-LLLDIHASLRLFGGLRPLLRRADRLVRAQ-AVQPRWSLASTPLAARL 152 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG--IGR----------------- 189 H ++ V L + R+ + + WG G Sbjct: 153 LAH--APPAQRQRRCVQLRSTRRRVLALPLALLGA-WGLPCGATDTERRAADGPADAAGV 209 Query: 190 ----------RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + L A+G + + DL +R+ + G Sbjct: 210 AARRVAAAHIATLEMLHALGARCLADLQRLPRAGLRRRGAQDWVDALDRALG-DQPDPRR 268 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + R P++ A L + + +S ++ ++ Sbjct: 269 CHEPPEAFALALELPWRADAVPAIEAAAAPLVQALCGWLALRWRAAQGLSLILR-HDYSS 327 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + L TP++++R + L + A + L + Sbjct: 328 RRSLPDQVLRLDLATPSREARHLQTLLREHLQHLVLAA-PVDAITLQLDTSLPEAGRPTT 386 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 L+ D + + ++D L A+ G + Sbjct: 387 LWPDAHQQAQAH--TNLVDRLQARLGAAQVRR 416 >UniRef50_C9Y7V7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7V7_9BURK Length = 488 Score = 45.4 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 43/367 (11%), Positives = 98/367 (26%), Gaps = 34/367 (9%) Query: 50 KMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG 109 + + + L D S + +P V D +++ Sbjct: 9 RRAMH-WIALR--PSPDAAAAPTEPAL-VDASTALAWWALRFTPLVARVG-DALVLEVSA 63 Query: 110 VRNC-RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 T +++ + Q HL G LA L HA + + L + Sbjct: 64 SERLFGGRTALLQQLLESNRQLAHLEYAQGATSLIALAALQVHAC-RVGQAAPVRAVLPD 122 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 L +A P + L +G++T L + + F + + Sbjct: 123 ALPVHTLAAAQP--HLP--------TLARLGMRTWGQLRALPRGGVVRRFGAEVVDALDR 172 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR--AAEKLRSEHQYCR 286 G+ ++ + + P++ A+ + R Sbjct: 173 AYGQ-RPEVYPWLTLPDVFDAPLELAASVDSAPALLFGARRLLAQLLVWLRARQSGVLAL 231 Query: 287 FI--STFIKTSPFALNEPYYGNSASVKL----LTPTQDSRDIINAATRSLDAIWQAG--H 338 + + + + ++ +L TQD + L + Sbjct: 232 ELLWELDARRANTRHVDAHHQGGQQGRLELRTAEATQDMSHLKRILGEQLARVTLPAPVL 291 Query: 339 RYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG-QGIQ 397 + + + +L + L ++ L A+ G ++ A Q Sbjct: 292 YLRLRSLQTQPLGGESH---SLL--PEDVRKGDSLHQTLERLAARLGAHSVQCATPQADH 346 Query: 398 QQWQMKR 404 + +M+R Sbjct: 347 RPERMQR 353 >UniRef50_C7RN50 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN50_9PROT Length = 497 Score = 45.4 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 35/234 (14%), Positives = 76/234 (32%), Gaps = 26/234 (11%) Query: 168 NLERQRKLMSALPVD--DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 + ++ + + LP+ D+ + +L + G+++V DL + + Sbjct: 152 DADQLPQRLGRLPLAVLDLS---AQSRARLASFGVRSVADLLRLPRAGLARRLGADFAAD 208 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM----RQAICSYAARAAEKLRSE 281 + GE F ++ R+ + ++ R+ I S A + Sbjct: 209 LARALGELPDPRARFVFPER-FSEQLELPMRVENATALGFAGRRLITSLCGWLAAR---R 264 Query: 282 HQYCRFISTFIKTSPFALNEPYYGNSASV---KLLTPTQDSRDIINAATRSLDAIWQAGH 338 + FA SA+V + T+D+ I L + Sbjct: 265 GGISECLF------EFAHERGARQRSATVLVLRFAGATRDAERIARVLGEHLQRLELPAA 318 Query: 339 RYQKAGVMLGDFFSQGVAQLNLFDDN---APRPGSEQLMTVMDTLNAKEGRGTL 389 + + + +NL + A G E L +++ L A+ G G++ Sbjct: 319 A-ELISLRAEAPEALPGHTVNLLGEYGGGAGGAGGESLAALVERLQARLGSGSV 371 >UniRef50_C1RL94 Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RL94_9CELL Length = 173 Score = 45.4 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 4/75 (5%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P V + A +A A+A GV+ G + + + +V + + Sbjct: 27 DVPAAVHDGRR--ITAVSALARADGVRRGMRRRQAQGVCPE--LVLLPVDDARDVRLFEP 82 Query: 84 VMSTLEELSPRVEIY 98 V + E + VE+ Sbjct: 83 VAAATETVVAGVEVA 97 >UniRef50_D2C795 RecB family nuclease, putative n=5 Tax=Thermotogaceae RepID=D2C795_THENR Length = 394 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELR 230 V GIG + L MGI+T+ DLA D R + K F +R + R Sbjct: 172 VNGIGEETYRVLYGMGIETLEDLAGADQRILEKVFGKEKGKRFIMAAR 219 >UniRef50_Q5JET4 Pko radA intein n=2 Tax=Euryarchaeota RepID=RADA_PYRKO Length = 836 Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 9/53 (16%), Positives = 24/53 (45%), Gaps = 3/53 (5%) Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV---LERTVRELR 230 ++D+ G+G ++KL G T+ +A +++ + + ++ R Sbjct: 42 LEDLPGVGPATAEKLREAGYDTIEAIAVASPLELKEIAGISEGAALKIIQAAR 94 >UniRef50_D2RPZ6 Putative uncharacterized protein n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RPZ6_9EURY Length = 272 Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%) Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 E + PVD + GIG + +L A G++TV +LAD D + Sbjct: 205 PEEAADDETNQEPVDSIKGIGPAYADRLAAAGVETVGELADADADDL 251 >UniRef50_UPI000197AD37 hypothetical protein BACCOPRO_01772 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197AD37 Length = 251 Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 82/202 (40%), Gaps = 29/202 (14%) Query: 70 FSSNYELYADMSNRVMSTLEELSPRVE--IYSIDEAFCDLTGV-----RNCRDLTDFGRE 122 S++ E Y +S +V S L +E ++++ C L+ + R+ L + +E Sbjct: 62 ISADNEKYTALSYQV-SRLRNFVNELENRQKELEDSNCVLSDINTELKRSNTTLINKAKE 120 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +R + QR T+ +AN+ +TG + ++N++ + + + Sbjct: 121 LREDIRQRE-----------DTIRDMANYVDSIKSIKTGLEIAVNNIDAEEIPFLSRAIT 169 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN---VVLERTVRELR------GEP 233 D+ GI ++L GI V +L + ++ + V ++R +L G Sbjct: 170 DL-GITPSARERLAKEGILYVGELIHLNEDYLMDIWGVGPVTIDRIKNKLNENSVWFGMD 228 Query: 234 CLQLEEFAPTKQEIICSRSFGE 255 +++ + ++ ++G Sbjct: 229 VIRINDRWYRRKSTNNGLNYGR 250 >UniRef50_C4ZK47 Putative uncharacterized protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZK47_THASP Length = 505 Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 50/350 (14%), Positives = 94/350 (26%), Gaps = 22/350 (6%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+ +LS G V+A +A A A G++ G L + A+ + Sbjct: 25 PLAILS-PRGRVLAASAAASAAGIEPGQRAASALALLPELRLQ--PHEPAREAEALAEIA 81 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + SPR+ + + D +++ T L T + A T Sbjct: 82 TWAGRFSPRISLSAADAVLLEISSCLRLFGGTAQIESALREGLAELGFTALLACAPTPLA 141 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLE----RQRKLMSALPVDDVWG---IGRRISKKLDAM 198 A+ AA + R + LP++ + + L + Sbjct: 142 ARWLARAAAPSALSCPPTDAALPTDAAGQDWRAALDPLPLELLSEEDACDAATLELLAGL 201 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE--PCLQLEEFAPTKQEIICSRSFGER 256 G++T+ +L + + R + RGE E + Sbjct: 202 GLRTLGELRRLPPAGLARRGAQAAARALARARGELADPRPWFEAPLRFH---HGIALPAP 258 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 ++ A A A L + H + L P+ Sbjct: 259 ELHAEALLFAARRLFASLAAWLDARHAAVDRFRLRF------GHGSRPPTELEFALGRPS 312 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 +D L + + + + +LF D A Sbjct: 313 RDEGHFALIVRERLAMLELSA-EVDSITLCAESPVAADPRARDLFGDPAQ 361 >UniRef50_C3DBT0 DNA-damage repair protein n=1 Tax=Bacillus thuringiensis serovar thuringiensis str. T01001 RepID=C3DBT0_BACTU Length = 48 Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 2/43 (4%) Query: 107 LTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 +T + + +F + + V ++T + VGI +AK Sbjct: 1 MTSTLHLFANNPIEFAMKFKREVYEKTRIECAVGIGPNPLMAK 43 >UniRef50_A4X7V6 Putative uncharacterized protein n=2 Tax=Salinispora RepID=A4X7V6_SALTO Length = 251 Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 11/76 (14%) Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLAD 208 A K +G + + G+G +++ L A GI+T LA+ Sbjct: 154 ATAEPKPDTAASG-----PEPDATDDF------RRIQGVGPKMAAALHAAGIRTYRQLAE 202 Query: 209 TDIRFIRKHFNVVLER 224 D+ +R+ R Sbjct: 203 LDVAALRETIRAAGLR 218 >UniRef50_A4WN87 DNA repair and recombination protein radA n=17 Tax=Archaea RepID=RADA_PYRAR Length = 333 Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV--VLERTVRELR 230 L V+++ G+G+ KL G TV D+A ++ + + + + R Sbjct: 24 DLDVEELEGVGKVTGAKLKEKGFYTVKDVAFASVKELAEIIGNEERALQIIESAR 78 >UniRef50_Q12AY4 Putative uncharacterized protein n=1 Tax=Polaromonas sp. JS666 RepID=Q12AY4_POLSJ Length = 476 Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 51/358 (14%), Positives = 101/358 (28%), Gaps = 56/358 (15%) Query: 78 ADMSNRVMSTLEELSPRVEIYSIDEA-FCDLTGVRNC-RDLTDFGREIRATV---LQRTH 132 A M V S +PRV + +DEA D+TG L + + + + Sbjct: 15 AAMQRAVASMALGFTPRVAL--VDEAVLMDVTGSLRLFGGLAQLMQLLEQRLAAFFEENG 72 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 L V A+ A + + + + +K ++ LP+ + + Sbjct: 73 LQAQVK------RAQGATSLIALGRLRLQDGQTQTQTDTVKKRVAELPMHTL------TA 120 Query: 193 KK-----LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG----EPCLQLEEFAPT 243 + L+ +G + DL + + F L + RG Q+ Sbjct: 121 ARPHLGVLERIGCRNWGDLLRLPRDGVARRFGAELLEALDRARGSAPDNYEWQVLPEHFE 180 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKL--RSEHQYCRFISTFIKTSPFALNE 301 ++ +T P++ + L R I + Sbjct: 181 EK-----LELNALVTHAPALMAGVERLLVHLHAWLLGRQSGLCA----LKIIWHLDKRRD 231 Query: 302 PYYGNSASVKLLTPTQDSRDIIN-AATRSLDAIWQAGHRYQKAGVM--LGD-FFSQGVAQ 357 ++ P QD R + A + + + A Sbjct: 232 VAPTGELEIRTAQPAQDLRHVARLVAEHLAQQ--KLPAPVHSLTLQSLATELLADSAAAT 289 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRS 415 +L R + ++ +++ L+A+ G + Q WQ P R Sbjct: 290 GSLL--MEAREQGDSVVELVERLSARLGDAQV--------QAWQPCADHR-PELMQRW 336 >UniRef50_C5CQX8 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CQX8_VARPS Length = 449 Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 27/223 (12%), Positives = 64/223 (28%), Gaps = 22/223 (9%) Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 L +G +T ++A + + F L + + G + F Sbjct: 123 LARLGCRTWGEVAALPRGGLTRRFGAELRKALDTAWGLSPESHDWLTLP-------DVFE 175 Query: 255 ERITDYPSMRQA--ICSYAARAAEK----LRSEHQYCRFIST--FIKTSPFALNEPYYGN 306 +++ A + A R LR+ + R + + F Sbjct: 176 QKLELPALAETAPELMWSANRLLAALQIWLRARQRGARALELQWTLDLKRFNGVNLPPHQ 235 Query: 307 SASVKLLTPTQDSRDIINAATR--SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 +V+ PTQD + + +L + + + A + Sbjct: 236 QVTVRTAEPTQDMAHLRRLLSEKLALTTLAAPASWLRL---RTLETDPWAGASTSFL--P 290 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 ++L +++ L+ + G + + + K+A Sbjct: 291 EDNRKGDKLHEMVERLSVRLGAHQVVVPAAQADHRPERKQAWR 333 >UniRef50_C6NX90 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX90_9GAMM Length = 471 Score = 44.7 bits (105), Expect = 0.007, Method: Composition-based stats. Identities = 47/306 (15%), Positives = 90/306 (29%), Gaps = 43/306 (14%) Query: 7 VNAFYASCETVFRPDL---------WGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFK 57 + ++Y + + P+L G VVL++ + R A G+ G K Sbjct: 3 MASYYVAV---YFPELDAGLWEQDEQGMAPVVLADGRHRLQQRGPMAIHCGLAPGMSLAK 59 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV---EIYSIDEAF-CDLTGVRNC 113 + L + + + L P+V E +S A ++ Sbjct: 60 ARALCPALRL--RPERPQRRLEFLRDWAHWLYGWGPQVAILEPWST--ALGVEVGSNPRW 115 Query: 114 R-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 R F +RA G A T T A L A G + ++ Sbjct: 116 RAGRQAFLEALRAR--AEGGPRWRWGAAPTATGAVLLALGAA------DGAGWTVSRQQW 167 Query: 173 RKLMSALPVDDVWGIGRRISKKLDA----MGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 ++ LP+ + ++ +G+ T+ DLA D + F ++ Sbjct: 168 AQVWPRLPLSALP-----AETRVQELWYSLGLGTLGDLAALDDAARAQRFGPYWGEFLQI 222 Query: 229 LRGE--PCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 + G F + + D+P++R + + L R Sbjct: 223 VAGLRPDPRPYFAFPEVPR---RELELVQPAGDWPALRFPLARLFRELQKMLTRAGLGAR 279 Query: 287 FISTFI 292 + Sbjct: 280 RWQLRL 285 >UniRef50_D0I998 Regulatory component of sensory transduction system n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I998_VIBHO Length = 583 Score = 44.3 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 13/84 (15%) Query: 79 DMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQ--------R 130 ++S R++ TL E+ V S DE L G+ + ++R + Q Sbjct: 200 ELSRRIVKTLREV-DTVGRVSGDEFLIVLPGLHQTENACQLASKLRKAINQPIEINGGGE 258 Query: 131 THLTVGVGIAQTKTLAKLANHAAK 154 ++T +GI+ L+ L + K Sbjct: 259 LYVTASIGIS----LSPLDSDDFK 278 >UniRef50_Q1AW94 ATP-dependent DNA helicase RecG n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AW94_RUBXD Length = 710 Score = 44.3 bits (104), Expect = 0.009, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 19/31 (61%) Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 + PV ++ G+G RI + L +GI +V DL Sbjct: 21 LRRRPVGELPGVGPRIERALRELGISSVADL 51 >UniRef50_C5A7K1 Glycosyl hydrolase family 57, possibly alpha-amylase n=9 Tax=Thermococcaceae RepID=C5A7K1_THEGJ Length = 683 Score = 44.3 bits (104), Expect = 0.010, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 27/47 (57%) Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 D+ GIG + KL+ GIKT DL + D++ + + + ++R + L Sbjct: 633 DIKGIGPKTLAKLNKAGIKTPEDLLNADLKELARKTRISIKRLRKFL 679 >UniRef50_B0MIB9 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MIB9_9FIRM Length = 140 Score = 43.9 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 23/41 (56%) Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKH 217 + + V GIG+RI++ L+A+GI V DL D + + Sbjct: 57 GSQDLQTVPGIGKRIAQHLNAIGIYCVDDLKGRDPEELYRM 97 >UniRef50_A9VKY6 YolD-like protein n=33 Tax=Bacillus cereus group RepID=A9VKY6_BACWK Length = 133 Score = 43.9 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 3/51 (5%) Query: 321 DIINAA-TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 DI N + G R + + L + +G Q++LFD+ R Sbjct: 2 DIYNVCTYFLYERH--TGERIRSISISLTNLIHEGEEQISLFDNIIQREKE 50 >UniRef50_Q5D892 Meiotic recombination protein MER3 n=4 Tax=Embryophyta RepID=Q5D892_ARATH Length = 1133 Score = 43.9 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 9/106 (8%) Query: 152 AAKKWQRQTGGVVDLSNLERQRKLMSALP--VDDVWGIGRRISKKLDAMGIKTVLDLADT 209 KK + T L+ +KL P + + GIG +K L +MG+++ LA+ Sbjct: 664 IYKKNYKGTLSSTLLAK-SLYQKLWDDSPYLLKQLPGIGMVTAKALHSMGVRSFEALAEA 722 Query: 210 DIRFIRKH------FNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 D R I F ++ ++ L + +++EE KQ I Sbjct: 723 DPRRIEIVTGRKYPFGNTIKESLSSLPPKVEIKVEEVDCQKQGISK 768 >UniRef50_A4YMQ8 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YMQ8_BRASO Length = 254 Score = 43.9 bits (103), Expect = 0.012, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 23/59 (38%) Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 R L S+ +D++ +G + KL + I+TV +LA +R Sbjct: 182 IKHGFVRSLASSRDIDELRALGPALKAKLRRLNIRTVGELAAQRPDHLRTLLGPPGRLI 240 >UniRef50_C0QGN3 UmuC3 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QGN3_DESAH Length = 102 Score = 43.9 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 21/43 (48%) Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF 218 M P+ DVWGIGRR+ GI+T LD IR + Sbjct: 1 MEMTPIGDVWGIGRRLPPFFKYRGIRTALDFKSAAPSLIRGKW 43 >UniRef50_Q97AI2 Putative ski2-type helicase n=2 Tax=Thermoplasma RepID=HELS_THEVO Length = 674 Score = 43.9 bits (103), Expect = 0.013, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 32/169 (18%) Query: 61 LFRRCGVVCFSSNY-ELYADMSNRVMSTLEELSPRVEIY--------SIDEAFCDLTGVR 111 L R N + YA M + ++ + +E I EA R Sbjct: 506 LCRE----IAPINMQDDYAAM--EFLESIGHIDGDIEAAKTALVLREWISEA-----STR 554 Query: 112 NCRDLTDFG-REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 ++ +++A V ++ LA LA+ K +R+ ++++ E Sbjct: 555 RIFEMYGVAPGDLQARVNNADWISYS--------LAHLAS-IFKPERRRKLEILNMRIKE 605 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 R+ + L + + IGR +++L GI V +LA +D I+ + Sbjct: 606 GIREELMDLVL--IPAIGRVRARRLYEAGIHNVQELAFSDPSRIKMLYG 652 >UniRef50_C5CKZ3 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CKZ3_VARPS Length = 445 Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 30/238 (12%), Positives = 69/238 (28%), Gaps = 27/238 (11%) Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 +L+ ALP++ + + L +G +T+ + + + F+ L T+ + G Sbjct: 107 AQLLDALPIETLTQV-AAHQATLARLGCRTLGQVRALPRGGLSRRFDAQLLATLDQAYGL 165 Query: 233 PCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY--AARAAEKL------RSEHQY 284 +F ++ + A A R ++ R Sbjct: 166 RPETYSWAQLP-------ETFHAKLELMARVEHAPAMLFGARRLMLQMAGWLMARRSGVT 218 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 + G +V+ T+D+ + R L G Sbjct: 219 A--FTLRWCHDAMRARTAGDGGELTVRTAQATRDTEHL----MRLLAEHLGKVELLAPVG 272 Query: 345 ---VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 ++ + S L++ + E L V++ + A+ G + + Sbjct: 273 DLELLATEVQSLEEKSLSMLPEARQSG--ESLALVLERIAARLGPDRVLRPVILEDHR 328 >UniRef50_D0D245 Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0D245_9RHOB Length = 192 Score = 43.5 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 20/36 (55%) Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + D+ G+G ++ K+ MGI++ DLA D + Sbjct: 6 TNLTDIRGVGPALASKMREMGIQSAADLARADAERL 41 >UniRef50_Q7UFK0 Putative uncharacterized protein yqjH n=1 Tax=Rhodopirellula baltica RepID=Q7UFK0_RHOBA Length = 533 Score = 43.5 bits (102), Expect = 0.014, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF 218 +S + R ++ P+ D IG++ + + +GI TV D D + + + Sbjct: 348 VSTEDNVRLHVAD-PLVDAPSIGKKTAARFAGIGIHTVGDFLKADEKTMTRRL 399 >UniRef50_UPI000187C717 hypothetical protein MPER_04090 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187C717 Length = 149 Score = 43.5 bits (102), Expect = 0.015, Method: Composition-based stats. Identities = 17/155 (10%), Positives = 47/155 (30%), Gaps = 24/155 (15%) Query: 214 IRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 ++ F LR +++E + + ++ S++ + IT I AA Sbjct: 1 MQHKFGEEAIWVYEILR----TEVKEKSAVNKSMLASKNLQKPITKASEGHHWIRVLAAE 56 Query: 274 AAEKL---RSEH--QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 + +L R + + + + + P+ ++ S + + A ++ Sbjct: 57 LSLRLNDARKLNPHLWPKTLVLHAR----QGKLPFLFHAKSRSTPS--------LPAGSK 104 Query: 329 SLDAIWQAGHRYQKAG---VMLGDFFSQGVAQLNL 360 + K + Q ++ Sbjct: 105 LWKELVGNDSGPMKITNVQLAFTGIEVAEGGQQSI 139 >UniRef50_A8AB83 DNA repair and recombination protein radA n=16 Tax=Archaea RepID=RADA_IGNH4 Length = 327 Score = 43.5 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 24/71 (33%), Gaps = 4/71 (5%) Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV---VLERTVRELRGEP 233 V ++ G+G + KL G T+ LA + + ++ +R R Sbjct: 10 RPTSVAELPGVGPSTAAKLIDAGYGTIEALAVATPEELVAI-GIPLTTAQKIIRAARQML 68 Query: 234 CLQLEEFAPTK 244 ++ K Sbjct: 69 DIRFRTAKEVK 79 >UniRef50_B0PCE4 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PCE4_9FIRM Length = 91 Score = 43.5 bits (102), Expect = 0.016, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 7/57 (12%) Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 ++ + G+G ++ L A+G TV L D + + ER G + Sbjct: 5 LEKIPGVGPNMAAHLHALGFDTVESLRGQDPQALY-------ERDCARCGGILDRCV 54 >UniRef50_C7NSS7 DNA mismatch repair protein MutS domain protein n=3 Tax=Halobacteriaceae RepID=C7NSS7_HALUD Length = 583 Score = 43.5 bits (102), Expect = 0.017, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 12/78 (15%) Query: 179 LPVDDVWGIGRRISKKL-DAMGIKTV------LDLADTDIRFIRKHFNVVLERTVRELRG 231 + V+D WG+G + L +++GI+T DL + + R +R +G Sbjct: 1 MDVEDYWGVGPKTRDLLAESLGIETAIAAIESGDLRALTEAGLSR---GRATRILRRAQG 57 Query: 232 E--PCLQLEEFAPTKQEI 247 L + + + Sbjct: 58 GAMDVLATRDARSVYKSV 75 >UniRef50_Q3ITP0 Conserved aromatic amino acid cluster protein n=1 Tax=Natronomonas pharaonis DSM 2160 RepID=Q3ITP0_NATPD Length = 175 Score = 43.1 bits (101), Expect = 0.017, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 25/46 (54%) Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 PV++V GIG +K+L GI+TV L D D + ++ +R Sbjct: 120 PVENVNGIGPAYAKRLSDAGIETVTQLLDADPEAVADETDLSAKRI 165 >UniRef50_B8GE44 Putative uncharacterized protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GE44_METPE Length = 362 Score = 43.1 bits (101), Expect = 0.018, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 37/133 (27%), Gaps = 16/133 (12%) Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 + + R L+ + + GIG R + L G +T+ DL + F R R Sbjct: 101 DPDLLRTLLWE-DLTLIPGIGARTAASLQRRGYRTINDL------IWNRRFREEASRVQR 153 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSF--GER-------ITDYPSMRQAICSYAARAAEKL 278 + L + ++ +F G D ++ +L Sbjct: 154 RIEMTDRNDLLDLVLSRHSRSHRLAFLAGSPLQKSDLLFFDIETLGFFSRPIILFGLARL 213 Query: 279 RSEHQYCRFISTF 291 R Sbjct: 214 RENQLITTQFLLK 226 >UniRef50_B8FQ20 Putative uncharacterized protein n=2 Tax=Desulfitobacterium hafniense RepID=B8FQ20_DESHD Length = 387 Score = 43.1 bits (101), Expect = 0.019, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 2/65 (3%) Query: 167 SNLERQRKLMSALPVDDVWGIGRRISK-KLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 E + + LP+ D+ GIG ++ + L G + + L + K R Sbjct: 302 IPPEPDPRYIYQLPLKDLPGIGPKMVRNLLQHFGTE-MNVLHQVPGEELVKVAGEKAARW 360 Query: 226 VRELR 230 + R Sbjct: 361 IELSR 365 >UniRef50_UPI0001B453F1 DNA polymerase IV n=1 Tax=Mycobacterium intracellulare ATCC 13950 RepID=UPI0001B453F1 Length = 62 Score = 43.1 bits (101), Expect = 0.020, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 21/57 (36%), Gaps = 2/57 (3%) Query: 348 GDFFSQGVAQLNL-FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG-IQQQWQM 402 G QL L F + + R + + +D + + G+ L A ++M Sbjct: 1 SGIDRSGAQQLMLPFGEASRRAAGDDIDAAIDRVRRRYGKSALTPAVLLGRDPGFEM 57 >UniRef50_Q0C405 Putative uncharacterized protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C405_HYPNA Length = 652 Score = 43.1 bits (101), Expect = 0.021, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 18/42 (42%) Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV 221 PV D IG + + L GI+TV DL D + V Sbjct: 522 PVVDAPSIGPKTAAHLARAGIETVGDLIICDPDETAELLGVR 563 >UniRef50_C7I5M5 Putative uncharacterized protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I5M5_THIIN Length = 458 Score = 42.8 bits (100), Expect = 0.023, Method: Composition-based stats. Identities = 26/219 (11%), Positives = 68/219 (31%), Gaps = 5/219 (2%) Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 + + LP+ + + ++ L +G +T+ +L + + F L + + G Sbjct: 113 AERLDPLPLTVLT-VTAPLADTLAQLGCRTLGELRALPRGGLTRRFGPALVEALDQAYGL 171 Query: 233 PCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + + Q R+ + ++ A + L + + + Sbjct: 172 -RSPVFSWVTLPQTFCARLDLMARVENAMALVFAAKRLLLQLQGWLVARNAGVTAFTLRW 230 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + G++ ++ P +D + L + Q + + + Sbjct: 231 QHDGLRHQPGEEGDALVIRTAQPMRDMAHLSRLLAEQLARV-QLAAPVETLILEVDSVCD 289 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 +L D A + L V++ L A+ G + Sbjct: 290 YRPPTASLLPDAAED--RDTLNRVLERLAARLGAQRVVR 326 >UniRef50_C1XJF5 Glycosidase n=2 Tax=Meiothermus RepID=C1XJF5_MEIRU Length = 1253 Score = 42.8 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 19/46 (41%) Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 ++ + GIG +I+ L A GI T LA +R R Sbjct: 1172 DLERIKGIGPKIAAALQAAGISTYAQLAKARESTLRAVLAQAGIRL 1217 >UniRef50_C1V5F2 Putative uncharacterized protein n=1 Tax=Halogeometricum borinquense DSM 11551 RepID=C1V5F2_9EURY Length = 207 Score = 42.8 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI---RKHFNVVLERTVRELRGEP 233 PV++V GIG +++L +GI+TV DL+ D + ++R + Sbjct: 150 PVENVKGIGPAYAERLSDVGIETVDDLSSADAETVGEQIDVSEKRVQRWIDRANEYD 206 >UniRef50_B9LSZ5 Putative uncharacterized protein n=1 Tax=Halorubrum lacusprofundi ATCC 49239 RepID=B9LSZ5_HALLT Length = 174 Score = 42.8 bits (100), Expect = 0.024, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 21/32 (65%) Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIR 212 V+++ GIG +++L +GI+TV DLA D Sbjct: 120 VEELKGIGPAYAERLAEIGIETVDDLAAADAE 151 >UniRef50_C8SM62 NADH-ubiquinone dehydrogenase subunit n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SM62_9RHIZ Length = 229 Score = 42.8 bits (100), Expect = 0.026, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 21/50 (42%) Query: 165 DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 D + K + + GIG ++ K L+ +GI T +A + I Sbjct: 151 DFRQPKAMDKPAKPSDLKAIPGIGPKLEKVLNGLGIWTYAQIAAWSPQEI 200 >UniRef50_C6XNN9 Putative uncharacterized protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNN9_HIRBI Length = 801 Score = 42.8 bits (100), Expect = 0.027, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 18/40 (45%) Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 P+ D IG++ + ++ +GI TV D + + Sbjct: 670 PIVDAPSIGKKTAARMRNVGIHTVGDFVQAKAKDLSAKLG 709 >UniRef50_C9MQU9 UV-damage repair protein n=1 Tax=Prevotella veroralis F0319 RepID=C9MQU9_9BACT Length = 127 Score = 42.8 bits (100), Expect = 0.029, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 4/65 (6%) Query: 72 SNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCD--LTGVRNCRDLTDFGREIRATV 127 S ++ S + +YSIDE F D L + DF +I V Sbjct: 57 PRMAHNIQHSVKIYSIYLRYVALGDMHVYSIDEEFIDAILYLYSSKLSTHDFAMKIIRDV 116 Query: 128 LQRTH 132 L+ T Sbjct: 117 LRETG 121 >UniRef50_UPI000187DC51 hypothetical protein MPER_08778 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187DC51 Length = 274 Score = 42.4 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 4/75 (5%), Positives = 17/75 (22%), Gaps = 8/75 (10%) Query: 278 LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 + R ++ K + + + + ++ L + Sbjct: 1 MTQGGWAGRTVTLKYKLDTYQV------FTRAKSFDRWITKKEELFATGKELL--FPELP 52 Query: 338 HRYQKAGVMLGDFFS 352 + G+ + Sbjct: 53 LTLRLIGLRVTKLKD 67 >UniRef50_C9D3T2 Helix-hairpin-helix DNA-binding protein, class 1 n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D3T2_9RHOB Length = 222 Score = 42.4 bits (99), Expect = 0.029, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 20/39 (51%) Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKH 217 P+ + G+G ++K + GI++V D+A + + Sbjct: 2 TPIVKLPGVGPALAKAMQDHGIRSVEDVAARSEAELTQV 40 >UniRef50_Q2JEY1 Putative uncharacterized protein n=1 Tax=Frankia sp. CcI3 RepID=Q2JEY1_FRASC Length = 517 Score = 42.4 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 8/59 (13%) Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + ++ G+G I +L A+GI T LA+ + ER L G + + Sbjct: 449 LKEIVGVGPVIEARLRALGITTFSQLAEMGDTDV--------ERLAHRLDGFGDRIVSD 499 >UniRef50_C1ZKU0 Putative uncharacterized protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKU0_PLALI Length = 572 Score = 42.4 bits (99), Expect = 0.030, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 22/42 (52%) Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 +P++ IG + ++K + GI+TV + + + + + + Sbjct: 430 NMPLEKAPSIGPKTAEKFTSAGIRTVGEFVNAEPHELARKLS 471 >UniRef50_Q1GHZ0 Putative uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=Q1GHZ0_SILST Length = 219 Score = 42.4 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 3/55 (5%) Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI--RKHFNV-VLERTVRELR 230 P+ + G+G ++K L GI++V D+A + V +R + Sbjct: 2 TPILRLPGVGPALAKALQDHGIRSVEDVAARSEAELTAVPRLGVARAQRLKAAAQ 56 >UniRef50_O58001 Pho radA intein n=30 Tax=Archaea RepID=RADA_PYRHO Length = 529 Score = 42.4 bits (99), Expect = 0.031, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 31/77 (40%), Gaps = 7/77 (9%) Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV---LERTVRELRGEPC----L 235 D+ G+G ++KL G T+ +A +++ + + ++ R + Sbjct: 47 DLPGVGPATAEKLREAGFDTLEAIAVASPIELKEVAGISEGAALKIIQAARKAANLGTFM 106 Query: 236 QLEEFAPTKQEIICSRS 252 + +E+ ++ I + Sbjct: 107 RADEYLKKRESIGRIST 123 >UniRef50_D0D634 Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0D634_9RHOB Length = 678 Score = 42.4 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 51/147 (34%), Gaps = 31/147 (21%) Query: 150 NHAAKKWQRQTGGVVDLSNLERQRKLMSALP-----VDDVWGIGRRISKKLDAMGIKTVL 204 AAK GV L + P + + GIGR + +L A+G+ Sbjct: 283 AGAAKPDGPAPAGVA--------PGLFRSRPKTVDDLTKIHGIGRVMRDRLQALGVYRFA 334 Query: 205 DLADTDIRFIRKHFNVVLERTVRELRG-EPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 +A+ + + + LRG + L+++ + + + + + + Sbjct: 335 QIAEWEAPEL--------DWVAARLRGYRGKIDLDDWVAQARNLTAAPAAPPEYREPQEI 386 Query: 264 -RQAICS--------YAARAAEKLRSE 281 R+A+ A +E +R+ Sbjct: 387 VRRALTGQPVVPGAPMATALSEDMRAR 413 >UniRef50_C8WW85 ATP-dependent DNA helicase RecG n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW85_ALIAD Length = 678 Score = 42.4 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 4/81 (4%) Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI----RFIRKHFNVVLERTVRELRG 231 + +L V + G+G + + L+A+GI+TV DL T K F+ + R Sbjct: 3 LRSLSVRALPGVGPQKERALEALGIRTVDDLLHTYPFRYDERAEKPFSEWRDGDRVTARA 62 Query: 232 EPCLQLEEFAPTKQEIICSRS 252 ++ + I+ +R Sbjct: 63 VVEGPVQVRWRGSKSIMTARV 83 >UniRef50_A8LST4 Putative uncharacterized protein n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LST4_DINSH Length = 1471 Score = 42.4 bits (99), Expect = 0.035, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 22/37 (59%) Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 PV ++ G+ R ++ +L+ G++T+ DLA +R Sbjct: 1412 RPVTELEGVSREVAARLERAGVRTIGDLATASTAKLR 1448 >UniRef50_Q2YI94 Putative uncharacterized protein n=4 Tax=root RepID=Q2YI94_9ZZZZ Length = 135 Score = 42.0 bits (98), Expect = 0.041, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 3/84 (3%) Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 + GI KT A+L AK R+ + + K + + + G+G + ++ Sbjct: 20 IAAGI---KTDAELLEKCAKPAGRKALEAETGISGKLILKWANHCDLYRINGVGPQFAEL 76 Query: 195 LDAMGIKTVLDLADTDIRFIRKHF 218 L++ G+ TV +L ++ Sbjct: 77 LESAGVDTVKELKHRVAENLQAKL 100 >UniRef50_Q0AWE0 Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWE0_SYNWW Length = 96 Score = 42.0 bits (98), Expect = 0.042, Method: Composition-based stats. Identities = 3/46 (6%), Positives = 9/46 (19%), Gaps = 2/46 (4%) Query: 217 HFNVVLERTVRELRGEPCLQLEEFAPTK--QEIICSRSFGERITDY 260 E G + + + S + + + Sbjct: 10 RLGKWGEVLWSFANGYDRSPVVPMGEESIIKSVGNSITTPRDLENK 55 >UniRef50_D1S2J3 Putative uncharacterized protein n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1S2J3_9ACTO Length = 344 Score = 42.0 bits (98), Expect = 0.043, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 3/55 (5%) Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 + GIG +++ L GI+T LA+ D +R+ +R G Sbjct: 271 RRIQGIGPKLAAALQDAGIRTYRQLAELDEAALRQTVKAAG---LRAAPGLATWP 322 >UniRef50_D1IND7 Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) n=6 Tax=Eukaryota RepID=D1IND7_VITVI Length = 1270 Score = 42.0 bits (98), Expect = 0.043, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 173 RKLMSALP--VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 +KL P + + GIG +K L +MGI + LA+ D R I Sbjct: 682 QKLWDDSPYLLKQLPGIGMVTAKALHSMGIVSFEALAEADPRRIEIVTG 730 >UniRef50_C7H691 ATP-dependent DNA helicase RecG n=3 Tax=Ruminococcaceae RepID=C7H691_9FIRM Length = 698 Score = 41.6 bits (97), Expect = 0.053, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 20/39 (51%) Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 E L PV + G+G + +++ + +GI T+ DL Sbjct: 14 PAEHHTTLTPDTPVRYLKGVGPKTAERFEKLGIVTLADL 52 >UniRef50_B1GUP4 Putative DNA-damage repair protein n=1 Tax=Geobacillus stearothermophilus RepID=B1GUP4_BACST Length = 59 Score = 41.6 bits (97), Expect = 0.057, Method: Composition-based stats. Identities = 8/19 (42%), Positives = 10/19 (52%) Query: 2 FALCDVNAFYASCETVFRP 20 D+ +FYASCE V Sbjct: 13 ILCIDMKSFYASCECVDHG 31 >UniRef50_D0LI39 DEAD/DEAH box helicase domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LI39_HALO1 Length = 782 Score = 41.6 bits (97), Expect = 0.061, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 16/27 (59%) Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDL 206 PV + GIG +S +L G+ T+ DL Sbjct: 32 PVTTLPGIGPSLSARLAERGLHTLGDL 58 >UniRef50_A3MXS9 Rad51-like protein n=6 Tax=Thermoproteaceae RepID=A3MXS9_PYRCJ Length = 314 Score = 41.6 bits (97), Expect = 0.064, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 22/36 (61%) Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 P++++ G+G + ++L +G+ +V LA+ + + Sbjct: 11 PLEELEGVGPKTLERLRELGVTSVEHLAEFTVEELV 46 >UniRef50_B5QRU3 Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QRU3_LACRH Length = 84 Score = 41.2 bits (96), Expect = 0.065, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 4/49 (8%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAKA 46 D +FY S E + R + VLS D G V+A + K Sbjct: 11 IMCIDCKSFYDSVEAIRRGIHPLAADIAVLSKGDSPGGLVLATSPNCKK 59 >UniRef50_D2U3F4 ATP-dependent DNA helicase RecG n=1 Tax=Arsenophonus nasoniae RepID=D2U3F4_9ENTR Length = 720 Score = 41.2 bits (96), Expect = 0.065, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 24/33 (72%) Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 KL+ A+P+ + G+G ++KL+ +G++T+ DL Sbjct: 31 KLLDAIPLTSLNGVGASQAEKLNKIGLRTIQDL 63 >UniRef50_A3W2N8 Putative uncharacterized protein n=2 Tax=Roseovarius RepID=A3W2N8_9RHOB Length = 136 Score = 41.2 bits (96), Expect = 0.069, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 3/68 (4%) Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV---VLERTVRELRGEPCLQL 237 ++D+ GIG I+ L +GI T L+D+D+ + + + + + Sbjct: 4 LNDIPGIGPAIATGLAKIGIATTKQLSDSDVPTLTQVRGISEARAAEFIAVAKKLSASPE 63 Query: 238 EEFAPTKQ 245 + Sbjct: 64 RTKESPAK 71 >UniRef50_A2SR54 DNA repair and recombination protein radA n=31 Tax=Archaea RepID=RADA_METLZ Length = 329 Score = 41.2 bits (96), Expect = 0.070, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 20/39 (51%) Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 M+AL ++++ G+G + +L G TV +A + Sbjct: 1 MTALDIEEIPGVGPATADRLRDAGYITVESIATATPVDL 39 >UniRef50_Q6KZ87 Helicase involved in UV-protection n=1 Tax=Picrophilus torridus RepID=Q6KZ87_PICTO Length = 674 Score = 41.2 bits (96), Expect = 0.072, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVL 204 L +L++ K+ + + + + L+ + + +GR +++L G KTV Sbjct: 579 LYRLSSVYKKEMESKLFHLNIRIKEGIKPDLI---DLIKIPKVGRVRARRLYDNGFKTVD 635 Query: 205 DLADTDIRFIRKHFN 219 D+A + I K F Sbjct: 636 DIARSSPENIEKIFG 650 >UniRef50_C7TQB5 ATP-dependent DNA helicase (Fragment) n=1 Tax=Arsenophonus endosymbiont of Trialeurodes vaporariorum RepID=C7TQB5_9ENTR Length = 77 Score = 41.2 bits (96), Expect = 0.080, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 25/41 (60%) Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 + KL+ A+P+ + G+G ++KL+ +G++T+ DL Sbjct: 26 WRTNRIRGKLLDAIPLTSLNGVGETQAEKLNKIGLRTIQDL 66 >UniRef50_B8IBL2 Molybdenum cofactor biosynthesis protein n=2 Tax=Methylobacterium RepID=B8IBL2_METNO Length = 134 Score = 40.8 bits (95), Expect = 0.086, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 3/82 (3%) Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 GIA T+ L A R+ + + + + + G+ R +++ L+ Sbjct: 22 AGIATTEALLTRAGD---PDGRRQLAQATGIDAALLLRWVGRCDLFRIHGLARPMTELLE 78 Query: 197 AMGIKTVLDLADTDIRFIRKHF 218 A GI TV DLA + + Sbjct: 79 AAGICTVADLARQNADSLVDTL 100 >UniRef50_C6JHL6 Putative uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JHL6_9FIRM Length = 228 Score = 40.8 bits (95), Expect = 0.096, Method: Composition-based stats. Identities = 5/36 (13%), Positives = 12/36 (33%) Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 E+L +D + + G ++ A + Sbjct: 173 PIKGLQQLEKLDRTVDEIRRRFGYFSIQRAAMYQNK 208 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P04152 Protein umuC n=103 Tax=Gammaproteobacteria RepID... 395 e-108 UniRef50_Q5N669 DNA polymerase V n=9 Tax=Bacteria RepID=Q5N669_S... 364 5e-99 UniRef50_A4SWQ9 DNA-directed DNA polymerase n=13 Tax=cellular or... 362 1e-98 UniRef50_A1U8F5 DNA-directed DNA polymerase n=6 Tax=Gammaproteob... 356 1e-96 UniRef50_A0L9G4 DNA-directed DNA polymerase n=1 Tax=Magnetococcu... 354 3e-96 UniRef50_Q11V03 Nucleotidyltransferase/DNA polymerase involved i... 348 2e-94 UniRef50_B0VH44 Protein umuC n=1 Tax=Candidatus Cloacamonas acid... 348 2e-94 UniRef50_B8FBE8 DNA polymerase IV n=1 Tax=Desulfatibacillum alke... 346 1e-93 UniRef50_D2QVG5 DNA-directed DNA polymerase n=1 Tax=Spirosoma li... 345 2e-93 UniRef50_B7JBK8 UmuC protein n=1 Tax=Acidithiobacillus ferrooxid... 344 4e-93 UniRef50_C0GDP3 DNA-directed DNA polymerase n=1 Tax=Dethiobacter... 341 3e-92 UniRef50_Q0VP68 DNA-damage-inducible protein n=4 Tax=Proteobacte... 340 5e-92 UniRef50_A1BFA1 DNA-directed DNA polymerase n=7 Tax=Chlorobiacea... 338 3e-91 UniRef50_Q3ABL2 DNA polymerase IV n=4 Tax=Firmicutes RepID=DPO4_... 338 3e-91 UniRef50_A6ET82 Nucleotidyltransferase/DNA polymerase involved i... 337 4e-91 UniRef50_Q48B37 RulB protein n=30 Tax=Pseudomonas RepID=Q48B37_P... 337 7e-91 UniRef50_Q0AX85 DNA-directed DNA polymerase n=1 Tax=Syntrophomon... 336 9e-91 UniRef50_Q2W5K5 Nucleotidyltransferase/DNA polymerase involved i... 335 1e-90 UniRef50_B8CWI6 DNA-directed DNA polymerase n=1 Tax=Halothermoth... 335 1e-90 UniRef50_C3X802 DNA-directed DNA polymerase n=1 Tax=Oxalobacter ... 334 3e-90 UniRef50_A9E9W4 Nucleotidyltransferase/DNA polymerase involved i... 334 4e-90 UniRef50_Q5ZUT9 SOS mutagenesis and repair UmuC protein n=12 Tax... 334 6e-90 UniRef50_C7RB82 DNA-directed DNA polymerase n=1 Tax=Kangiella ko... 332 2e-89 UniRef50_Q11QJ9 Nucleotidyltransferase/DNA polymerase involved i... 331 3e-89 UniRef50_B9M459 DNA-directed DNA polymerase n=14 Tax=Bacteria Re... 330 5e-89 UniRef50_C0VGI8 Nucleotidyltransferase/DNA polymerase n=4 Tax=Ac... 330 5e-89 UniRef50_A5FIG7 DNA-directed DNA polymerase n=10 Tax=cellular or... 330 7e-89 UniRef50_P07375 Protein mucB n=137 Tax=root RepID=MUCB_ECOLX 330 7e-89 UniRef50_C0QCD0 UmuC1 n=3 Tax=Desulfobacterium autotrophicum HRM... 329 1e-88 UniRef50_A0LG84 DNA-directed DNA polymerase n=4 Tax=Deltaproteob... 328 2e-88 UniRef50_Q39ZU3 Damage-inducible protein DinP n=1 Tax=Pelobacter... 328 3e-88 UniRef50_C6BW91 DNA-directed DNA polymerase n=4 Tax=Bacteria Rep... 328 3e-88 UniRef50_C6PAP1 DNA-directed DNA polymerase n=1 Tax=Thermoanaero... 328 3e-88 UniRef50_C9LED2 UmuC protein n=1 Tax=Prevotella tannerae ATCC 51... 327 3e-88 UniRef50_B4YK21 TumC n=1 Tax=Tetrathiobacter kashmirensis RepID=... 327 4e-88 UniRef50_A8ZLK7 DNA polymerase V, putative n=4 Tax=Cyanobacteria... 327 5e-88 UniRef50_C6BX75 DNA-directed DNA polymerase n=1 Tax=Desulfovibri... 326 1e-87 UniRef50_C6M791 Protein UmuC n=2 Tax=Neisseria RepID=C6M791_NEISI 325 1e-87 UniRef50_C6CYA7 DNA-directed DNA polymerase n=3 Tax=Bacillales R... 325 2e-87 UniRef50_Q1QXT4 DNA-directed DNA polymerase n=1 Tax=Chromohaloba... 325 2e-87 UniRef50_Q0ACU7 DNA-directed DNA polymerase n=3 Tax=Nitrosomonas... 325 2e-87 UniRef50_C8X192 DNA-directed DNA polymerase n=2 Tax=Deltaproteob... 325 2e-87 UniRef50_C7LWM3 DNA-directed DNA polymerase n=1 Tax=Desulfomicro... 323 7e-87 UniRef50_B4WV07 ImpB/MucB/SamB family n=6 Tax=Synechococcus sp. ... 323 8e-87 UniRef50_B2A8L2 DNA-directed DNA polymerase n=1 Tax=Natranaerobi... 323 8e-87 UniRef50_C6XDV2 DNA-directed DNA polymerase n=2 Tax=Methylovorus... 323 9e-87 UniRef50_B5JVF1 UmuC protein n=1 Tax=gamma proteobacterium HTCC5... 323 1e-86 UniRef50_A5Y0S5 UmuC-like protein n=9 Tax=Proteobacteria RepID=A... 322 1e-86 UniRef50_C8X3R0 DNA-directed DNA polymerase n=1 Tax=Desulfohalob... 322 1e-86 UniRef50_A6CAV0 DNA-damage-inducible protein P n=2 Tax=Planctomy... 320 9e-86 UniRef50_Q15TC7 DNA-directed DNA polymerase n=25 Tax=Proteobacte... 319 1e-85 UniRef50_C7I5S1 DNA-directed DNA polymerase n=2 Tax=Proteobacter... 318 2e-85 UniRef50_D0RPK3 Protein UmuC n=1 Tax=alpha proteobacterium HIMB1... 318 3e-85 UniRef50_A8ZS21 DNA-directed DNA polymerase n=1 Tax=Desulfococcu... 317 6e-85 UniRef50_Q818U9 DNA polymerase IV n=137 Tax=Bacillaceae RepID=DP... 316 9e-85 UniRef50_D0KZ56 DNA-directed DNA polymerase n=12 Tax=root RepID=... 316 1e-84 UniRef50_UPI0000E87FBE DNA repair protein n=1 Tax=Methylophilale... 316 1e-84 UniRef50_Q4FMY4 UmuC n=6 Tax=Bacteria RepID=Q4FMY4_PELUB 315 1e-84 UniRef50_B2FJL0 Putative UV protection and mutation protein n=1 ... 315 2e-84 UniRef50_D0J481 DNA-directed DNA polymerase n=4 Tax=cellular org... 315 2e-84 UniRef50_D1R5W7 Putative uncharacterized protein n=1 Tax=Parachl... 315 2e-84 UniRef50_Q3AKE9 DNA-directed DNA polymerase n=7 Tax=Bacteria Rep... 315 2e-84 UniRef50_P58965 DNA polymerase IV n=29 Tax=Clostridia RepID=DPO4... 315 3e-84 UniRef50_B3E0C4 Nucleotidyltransferase/DNA polymerase UmuC n=1 T... 314 3e-84 UniRef50_A9W7Y3 DNA-directed DNA polymerase n=10 Tax=Rhizobiales... 314 3e-84 UniRef50_C0WCT4 DNA-directed DNA polymerase n=1 Tax=Acidaminococ... 314 4e-84 UniRef50_C6XEM8 DNA-directed DNA polymerase n=1 Tax=Methylovorus... 313 5e-84 UniRef50_A5CQW8 DNA polymerase IV n=18 Tax=Actinobacteria (class... 313 6e-84 UniRef50_C9KLE5 DNA polymerase IV n=2 Tax=Veillonellaceae RepID=... 313 6e-84 UniRef50_D0Z2K2 Error-prone repair protein UmuC n=5 Tax=Photobac... 313 7e-84 UniRef50_B9Z6P1 DNA-directed DNA polymerase n=2 Tax=Proteobacter... 313 8e-84 UniRef50_C7H2N6 DNA polymerase IV n=8 Tax=Bacteria RepID=C7H2N6_... 313 1e-83 UniRef50_Q7USY7 DNA polymerase IV n=1 Tax=Rhodopirellula baltica... 312 2e-83 UniRef50_Q2YI99 Nucleotidyltransferase/DNA polymerase n=3 Tax=Ba... 310 5e-83 UniRef50_Q31B23 DNA-directed DNA polymerase n=7 Tax=Prochlorococ... 310 6e-83 UniRef50_B6BWB3 DNA-directed DNA polymerase n=1 Tax=beta proteob... 310 6e-83 UniRef50_D1PC12 UmuC protein n=2 Tax=Bacteria RepID=D1PC12_9BACT 309 2e-82 UniRef50_Q19NE6 UV protection and repair protein n=9 Tax=Enterob... 308 2e-82 UniRef50_Q30X29 DNA-directed DNA polymerase n=8 Tax=Proteobacter... 307 4e-82 UniRef50_B2I3H3 Nucleotidyltransferase/DNA polymerase n=12 Tax=A... 307 4e-82 UniRef50_B8DIF6 DNA-directed DNA polymerase n=6 Tax=Desulfovibri... 307 6e-82 UniRef50_Q67QM6 DNA polymerase IV n=1 Tax=Symbiobacterium thermo... 307 8e-82 UniRef50_C0YV48 Probable RumB/ImpB like DNA repair protein n=1 T... 306 9e-82 UniRef50_D1C0B2 DNA-directed DNA polymerase n=2 Tax=Actinomyceta... 305 1e-81 UniRef50_A5GPY7 Bacterial UmuC protein homolog (SOS-regulated pr... 305 2e-81 UniRef50_C0QJE1 DinP n=1 Tax=Desulfobacterium autotrophicum HRM2... 305 2e-81 UniRef50_A5FU54 UMUC domain protein DNA-repair protein n=2 Tax=A... 305 2e-81 UniRef50_C9LNT4 ATP-NAD kinase n=1 Tax=Dialister invisus DSM 154... 305 2e-81 UniRef50_A4CII2 DNA polymerase IV n=20 Tax=cellular organisms Re... 304 4e-81 UniRef50_D1VXB9 Putative DNA polymerase V subunit UmuC n=1 Tax=P... 304 4e-81 UniRef50_A3DH61 DNA polymerase IV n=9 Tax=Clostridiales RepID=DP... 303 7e-81 UniRef50_Q2KZS3 DNA polymerase IV n=2 Tax=Proteobacteria RepID=Q... 303 1e-80 UniRef50_P54560 DNA polymerase IV 2 n=8 Tax=Bacillales RepID=DPO... 302 1e-80 UniRef50_C9LBG3 DNA polymerase IV n=6 Tax=Clostridiales RepID=C9... 302 1e-80 UniRef50_A4ECH9 Putative uncharacterized protein n=1 Tax=Collins... 302 2e-80 UniRef50_A6WU94 DNA-directed DNA polymerase n=28 Tax=Gammaproteo... 302 2e-80 UniRef50_B0PEH3 Putative uncharacterized protein n=2 Tax=Clostri... 301 3e-80 UniRef50_C6NU08 Error-prone repair protein UmuC n=1 Tax=Acidithi... 301 4e-80 UniRef50_Q1IRF1 DNA-directed DNA polymerase n=2 Tax=Acidobacteri... 300 5e-80 UniRef50_C4L3M4 DNA-directed DNA polymerase n=1 Tax=Exiguobacter... 300 6e-80 UniRef50_C6VYA9 DNA-directed DNA polymerase n=15 Tax=Bacteroidet... 300 6e-80 UniRef50_C4G590 Putative uncharacterized protein n=3 Tax=Firmicu... 299 1e-79 UniRef50_Q2P505 Polymerase V subunit n=4 Tax=Xanthomonadaceae Re... 299 1e-79 UniRef50_A5D243 DNA polymerase IV n=4 Tax=Clostridia RepID=DPO4_... 299 2e-79 UniRef50_C7NIB1 Nucleotidyltransferase/DNA polymerase involved i... 298 2e-79 UniRef50_C0ZFX0 DNA polymerase IV n=6 Tax=Bacillales RepID=C0ZFX... 298 2e-79 UniRef50_B8DRU5 DNA-directed DNA polymerase n=13 Tax=Proteobacte... 298 2e-79 UniRef50_D1VVF6 DNA polymerase IV n=1 Tax=Peptoniphilus lacrimal... 298 2e-79 UniRef50_B9JZV6 DNA-damage-inducible protein n=17 Tax=Bacteria R... 298 3e-79 UniRef50_A6EED8 Nucleotidyltransferase/DNA polymerase involved i... 298 3e-79 UniRef50_Q18A91 DNA polymerase IV n=46 Tax=Bacteria RepID=DPO4_C... 298 3e-79 UniRef50_Q2RYM0 UmuC protein n=2 Tax=Salinibacter ruber DSM 1385... 297 4e-79 UniRef50_C8NE97 DNA-directed DNA polymerase n=2 Tax=Granulicatel... 297 5e-79 UniRef50_D1PR84 DNA-directed DNA polymerase n=1 Tax=Subdoligranu... 297 7e-79 UniRef50_C5D272 DNA-directed DNA polymerase n=5 Tax=Geobacillus ... 297 7e-79 UniRef50_Q3B3L9 DNA-directed DNA polymerase n=2 Tax=Chlorobium/P... 297 7e-79 UniRef50_C7R3I3 DNA-directed DNA polymerase n=1 Tax=Jonesia deni... 297 7e-79 UniRef50_A5FSS1 DNA polymerase IV n=5 Tax=Dehalococcoides RepID=... 297 7e-79 UniRef50_A6GF38 DNA-directed DNA polymerase n=1 Tax=Plesiocystis... 296 9e-79 UniRef50_B9MMT7 DNA-directed DNA polymerase n=2 Tax=Clostridia R... 296 1e-78 UniRef50_A5N2U5 DNA polymerase IV n=5 Tax=Clostridiaceae RepID=D... 296 1e-78 UniRef50_B8G1R4 DNA-directed DNA polymerase n=2 Tax=Desulfitobac... 295 2e-78 UniRef50_A0L3I2 DNA-directed DNA polymerase n=1 Tax=Shewanella s... 295 3e-78 UniRef50_Q0AWD6 DNA-directed DNA polymerase n=7 Tax=Bacteria Rep... 295 3e-78 UniRef50_C5BW73 DNA-directed DNA polymerase n=4 Tax=Actinomyceta... 294 3e-78 UniRef50_C9RDA6 DNA-directed DNA polymerase n=1 Tax=Ammonifex de... 294 4e-78 UniRef50_Q1QXW8 DNA-directed DNA polymerase n=1 Tax=Chromohaloba... 294 4e-78 UniRef50_A0K1P6 DNA-directed DNA polymerase n=7 Tax=Bacteria Rep... 294 4e-78 UniRef50_D0WQX0 DNA polymerase IV n=1 Tax=Actinomyces sp. oral t... 293 8e-78 UniRef50_A6DHJ1 Putative uncharacterized protein n=1 Tax=Lentisp... 292 1e-77 UniRef50_C2BWE4 DNA-directed DNA polymerase n=1 Tax=Mobiluncus c... 292 1e-77 UniRef50_B5EN92 DNA-directed DNA polymerase n=2 Tax=Acidithiobac... 292 2e-77 UniRef50_A3CSG3 DNA polymerase IV n=4 Tax=Methanomicrobia RepID=... 292 2e-77 UniRef50_UPI0001982DE6 PREDICTED: hypothetical protein n=1 Tax=V... 292 2e-77 UniRef50_Q31HB8 ImpB/mucB/samB family protein n=1 Tax=Thiomicros... 292 2e-77 UniRef50_B4WH69 ImpB/MucB/SamB family n=1 Tax=Synechococcus sp. ... 292 2e-77 UniRef50_C0FVJ8 Putative uncharacterized protein n=1 Tax=Rosebur... 290 5e-77 UniRef50_A7REV5 Predicted protein (Fragment) n=1 Tax=Nematostell... 290 5e-77 UniRef50_B9YCM9 Putative uncharacterized protein n=1 Tax=Holdema... 290 7e-77 UniRef50_B1YK83 DNA polymerase IV n=1 Tax=Exiguobacterium sibiri... 290 8e-77 UniRef50_Q0KKM4 Putative UV protection protein n=1 Tax=Plasmid p... 290 8e-77 UniRef50_A3M2E2 DNA-directed DNA polymerase n=8 Tax=Acinetobacte... 290 1e-76 UniRef50_A6NU31 Putative uncharacterized protein n=4 Tax=Bacteri... 289 1e-76 UniRef50_Q4L7K8 DNA polymerase IV n=65 Tax=Staphylococcaceae Rep... 289 1e-76 UniRef50_C6WDG0 DNA-directed DNA polymerase n=8 Tax=Actinomyceta... 289 1e-76 UniRef50_C6XT23 DNA-directed DNA polymerase n=1 Tax=Pedobacter h... 289 1e-76 UniRef50_D2NU69 Nucleotidyltransferase/DNA polymerase involved i... 289 1e-76 UniRef50_B3T119 Putative impB/mucB/samB family protein n=1 Tax=u... 289 1e-76 UniRef50_Q73P36 DNA polymerase IV n=2 Tax=Treponema RepID=DPO4_T... 289 2e-76 UniRef50_Q8UJK7 DNA polymerase IV 2 n=3 Tax=Bacteria RepID=DPO42... 288 2e-76 UniRef50_B2GJQ9 DNA polymerase IV n=1 Tax=Kocuria rhizophila DC2... 288 2e-76 UniRef50_C0LIJ7 Putative DNA polymerase V subunit UmuC n=1 Tax=A... 288 2e-76 UniRef50_Q8VMP6 RuvB protein n=4 Tax=Pseudomonas RepID=Q8VMP6_PSEPU 288 3e-76 UniRef50_B6WBQ9 Putative uncharacterized protein n=1 Tax=Anaeroc... 287 4e-76 UniRef50_C8WRW0 DNA-directed DNA polymerase n=2 Tax=Alicyclobaci... 287 6e-76 UniRef50_C8P3H3 DNA polymerase IV (Pol IV) n=1 Tax=Erysipelothri... 287 8e-76 UniRef50_D2MQ51 Putative DNA polymerase IV n=1 Tax=Bulleidia ext... 287 8e-76 UniRef50_A0M5X6 DNA polymerase IV n=19 Tax=Bacteroidetes RepID=A... 286 1e-75 UniRef50_Q97MB3 DNA polymerase IV n=1 Tax=Clostridium acetobutyl... 286 1e-75 UniRef50_C1A1E2 DNA polymerase IV n=28 Tax=Actinobacteria (class... 286 1e-75 UniRef50_C6NY09 DNA polymerase IV n=2 Tax=Bacteria RepID=C6NY09_... 286 1e-75 UniRef50_B7AQS7 Putative uncharacterized protein n=1 Tax=Bactero... 286 1e-75 UniRef50_Q6AL48 DNA polymerase IV n=1 Tax=Desulfotalea psychroph... 285 2e-75 UniRef50_B1CA62 Putative uncharacterized protein n=1 Tax=Anaerof... 285 3e-75 UniRef50_Q04M21 DNA polymerase IV n=98 Tax=Bacilli RepID=DPO4_STRP2 284 3e-75 UniRef50_Q2IM85 DNA-directed DNA polymerase n=7 Tax=Myxococcales... 284 5e-75 UniRef50_A1WY69 DNA polymerase IV n=47 Tax=Bacteria RepID=DPO4_H... 284 5e-75 UniRef50_Q1QAG3 DNA-directed DNA polymerase n=2 Tax=Psychrobacte... 283 6e-75 UniRef50_C8WAH8 DNA-directed DNA polymerase n=3 Tax=Coriobacteri... 283 6e-75 UniRef50_Q2P7M9 DNA polymerase IV n=22 Tax=Proteobacteria RepID=... 283 7e-75 UniRef50_Q2LU75 DNA polymerase IV n=1 Tax=Syntrophus aciditrophi... 283 1e-74 UniRef50_B1KD33 DNA polymerase IV n=55 Tax=Proteobacteria RepID=... 283 1e-74 UniRef50_B0VP90 DNA polymerase IV, devoid of proofreading, damag... 282 1e-74 UniRef50_A9KLV9 DNA-directed DNA polymerase n=8 Tax=Clostridiale... 282 1e-74 UniRef50_D1PGW5 DNA-directed DNA polymerase n=1 Tax=Prevotella c... 282 2e-74 UniRef50_Q2FKS4 DNA-directed DNA polymerase n=1 Tax=Methanospiri... 282 2e-74 UniRef50_C7MN57 Nucleotidyltransferase/DNA polymerase involved i... 282 2e-74 UniRef50_C7RFL5 DNA-directed DNA polymerase n=3 Tax=Anaerococcus... 282 2e-74 UniRef50_UPI000050FCD1 DNA-directed DNA polymerase n=1 Tax=Brevi... 282 2e-74 UniRef50_C1F962 Putative DNA polymerase IV n=2 Tax=Bacteria RepI... 281 4e-74 UniRef50_C0D1Q6 Putative uncharacterized protein n=2 Tax=Clostri... 281 4e-74 UniRef50_B9HS71 Predicted protein n=1 Tax=Populus trichocarpa Re... 280 6e-74 UniRef50_Q2S2C0 Putative DNA polymerase IV n=2 Tax=Bacteria RepI... 280 7e-74 UniRef50_B9JVH1 DNA-damage inducible protein n=18 Tax=Alphaprote... 280 7e-74 UniRef50_C8WGA6 DNA-directed DNA polymerase n=3 Tax=Bacteria Rep... 280 9e-74 UniRef50_A9KNH1 DNA-directed DNA polymerase n=4 Tax=Clostridiale... 279 1e-73 UniRef50_Q8UFV3 DNA polymerase IV 1 n=118 Tax=Alphaproteobacteri... 279 1e-73 UniRef50_Q38YP4 DNA-damage-inducible protein P n=30 Tax=Bacilli ... 279 2e-73 UniRef50_A8RF31 Putative uncharacterized protein n=1 Tax=Eubacte... 278 2e-73 UniRef50_C6W6Q9 DNA-directed DNA polymerase n=3 Tax=Bacteroidete... 278 3e-73 UniRef50_C7H0B0 Putative DNA polymerase IV n=1 Tax=Eubacterium s... 278 3e-73 UniRef50_D1BPW6 UMUC domain protein DNA-repair protein n=2 Tax=V... 278 3e-73 UniRef50_D0LIK9 DNA-directed DNA polymerase n=1 Tax=Haliangium o... 278 3e-73 UniRef50_C4GAM5 Putative uncharacterized protein n=1 Tax=Shuttle... 278 3e-73 UniRef50_A3VP13 DNA polymerase IV n=5 Tax=Alphaproteobacteria Re... 277 5e-73 UniRef50_Q654Y6 Os06g0691000 protein n=7 Tax=Poaceae RepID=Q654Y... 276 1e-72 UniRef50_B0TQD1 DNA polymerase IV n=7 Tax=Bacteria RepID=DPO4_SHEHH 276 1e-72 UniRef50_Q72MY7 DNA polymerase IV n=18 Tax=Bacteria RepID=DPO4_L... 276 1e-72 UniRef50_C4F8L3 Putative uncharacterized protein n=2 Tax=Collins... 276 1e-72 UniRef50_A8RBK8 Putative uncharacterized protein n=2 Tax=unclass... 276 1e-72 UniRef50_A8YTI5 DNA-damage-inducible protein n=29 Tax=Lactobacil... 276 1e-72 UniRef50_B9YDA2 Putative uncharacterized protein n=1 Tax=Holdema... 276 1e-72 UniRef50_C9M6E1 UmuC protein n=1 Tax=Jonquetella anthropi E3_33 ... 275 2e-72 UniRef50_B0BPX9 DNA polymerase IV n=222 Tax=cellular organisms R... 275 2e-72 UniRef50_A7I5X9 DNA-directed DNA polymerase n=1 Tax=Candidatus M... 275 2e-72 UniRef50_Q0FEJ5 DNA polymerase IV n=3 Tax=Rhodobacterales RepID=... 275 2e-72 UniRef50_B0TAW2 DNA polymerase iv n=1 Tax=Heliobacterium modesti... 275 3e-72 UniRef50_A4BJD8 DNA polymerase IV n=1 Tax=Reinekea blandensis ME... 274 5e-72 UniRef50_B3WC63 DNA-damage-inducible protein P n=8 Tax=Lactobaci... 274 6e-72 UniRef50_Q9AK82 DNA polymerase IV n=34 Tax=Bacteria RepID=DPO4_S... 273 6e-72 UniRef50_B0MAH2 Putative uncharacterized protein n=1 Tax=Anaeros... 273 9e-72 UniRef50_C7RGQ0 DNA-directed DNA polymerase n=5 Tax=Anaerococcus... 273 1e-71 UniRef50_C3Y6K1 Putative uncharacterized protein (Fragment) n=1 ... 272 2e-71 UniRef50_B9X9L4 DNA-directed DNA polymerase n=3 Tax=Verrucomicro... 272 2e-71 UniRef50_C7QBJ0 DNA-directed DNA polymerase n=3 Tax=Actinomyceta... 272 2e-71 UniRef50_C2FXW7 Possible DNA-directed DNA polymerase n=2 Tax=Sph... 272 2e-71 UniRef50_C8NZM9 DNA polymerase IV n=1 Tax=Erysipelothrix rhusiop... 271 3e-71 UniRef50_Q46L62 DNA-directed DNA polymerase n=2 Tax=Prochlorococ... 271 3e-71 UniRef50_D1YPB9 Putative DNA polymerase IV n=1 Tax=Veillonella p... 271 3e-71 UniRef50_A1KUQ3 DNA polymerase IV n=34 Tax=Proteobacteria RepID=... 271 3e-71 UniRef50_B2A4V8 DNA-directed DNA polymerase n=5 Tax=Clostridia R... 271 4e-71 UniRef50_C5NXH9 DNA polymerase IV 1 n=1 Tax=Gemella haemolysans ... 271 4e-71 UniRef50_A5Z8E0 Putative uncharacterized protein n=10 Tax=Clostr... 271 4e-71 UniRef50_Q0EYF1 Putative uncharacterized protein n=1 Tax=Maripro... 271 5e-71 UniRef50_A8UAY3 ImpB/MucB/SamB family protein n=5 Tax=Bacilli Re... 270 5e-71 UniRef50_Q6MCK0 Putative SOS mutagenesis and repair protein UmuC... 270 6e-71 UniRef50_D2A3T9 Putative uncharacterized protein GLEAN_14950 n=1... 270 8e-71 UniRef50_C5RD20 DNA-directed DNA polymerase n=1 Tax=Weissella pa... 270 8e-71 UniRef50_A3EWL3 Polymerase ATREV1-1105 n=8 Tax=rosids RepID=A3EW... 270 9e-71 UniRef50_B8GPZ5 DNA-directed DNA polymerase n=2 Tax=Gammaproteob... 270 1e-70 UniRef50_B0S0R3 DNA polymerase IV n=4 Tax=Clostridiales RepID=B0... 270 1e-70 UniRef50_C2KZY4 DNA polymerase IV n=2 Tax=Clostridiales RepID=C2... 269 1e-70 UniRef50_Q4ZWM4 DNA polymerase IV n=61 Tax=Bacteria RepID=DPO4_P... 269 1e-70 UniRef50_C4FTM8 Putative uncharacterized protein n=1 Tax=Catonel... 269 1e-70 UniRef50_Q2RNH1 DNA-directed DNA polymerase n=5 Tax=Alphaproteob... 268 2e-70 UniRef50_A5G2F2 DNA-directed DNA polymerase n=1 Tax=Acidiphilium... 268 3e-70 UniRef50_B3E013 Nucleotidyltransferase/DNA polymerase involved i... 268 3e-70 UniRef50_Q2LSC9 Nucleotidyltransferase/DNA polymerase protein n=... 268 3e-70 UniRef50_Q5WYY8 DNA polymerase IV n=64 Tax=Bacteria RepID=DPO4_L... 267 4e-70 UniRef50_B5Y6A2 DNA-directed DNA polymerase n=1 Tax=Coprothermob... 266 8e-70 UniRef50_B1ZN03 DNA polymerase IV n=2 Tax=Opitutaceae RepID=DPO4... 266 8e-70 UniRef50_D1C5S0 DNA-directed DNA polymerase n=1 Tax=Sphaerobacte... 266 8e-70 UniRef50_D0NDK9 DNA repair protein REV1 n=1 Tax=Phytophthora inf... 266 8e-70 UniRef50_B7S1R7 ImpB/MucB/SamB family protein n=1 Tax=marine gam... 266 1e-69 UniRef50_D1JEL0 DNA polymerase IV n=1 Tax=uncultured archaeon Re... 266 1e-69 UniRef50_B5TTR9 RumB n=6 Tax=Bacteria RepID=B5TTR9_9BACT 266 1e-69 UniRef50_B5JKI6 ImpB/MucB/SamB family n=1 Tax=Verrucomicrobiae b... 266 1e-69 UniRef50_C5CA41 DNA polymerase IV involved in DNA repair n=3 Tax... 265 2e-69 UniRef50_UPI0001C34BBE DNA-directed DNA polymerase n=3 Tax=Neiss... 265 2e-69 UniRef50_A9NFA5 DNA-damage repair protein n=5 Tax=Bacteria RepID... 264 3e-69 UniRef50_C5JS23 DNA damage repair protein Mus42 n=2 Tax=Ajellomy... 264 4e-69 UniRef50_Q2SS65 ImpB/MucB/SamB family protein n=3 Tax=Mycoplasma... 264 4e-69 UniRef50_A0YE03 DNA polymerase IV n=2 Tax=Gammaproteobacteria Re... 263 6e-69 UniRef50_Q2L7B2 REV1 n=7 Tax=Sordariomycetes RepID=Q2L7B2_NEUCR 263 1e-68 UniRef50_B6J224 DNA polymerase IV n=5 Tax=Coxiella burnetii RepI... 262 1e-68 UniRef50_UPI00016E76F4 UPI00016E76F4 related cluster n=1 Tax=Tak... 262 2e-68 UniRef50_A2QTI4 Contig An09c0050, complete genome n=9 Tax=Euroti... 262 2e-68 UniRef50_C0ZB00 DNA polymerase IV n=1 Tax=Brevibacillus brevis N... 262 2e-68 UniRef50_Q98JM5 DNA polymerase IV 2 n=4 Tax=Bacteria RepID=DPO42... 261 3e-68 UniRef50_B1MZW7 Nucleotidyltransferase/DNA polymerase involved i... 261 5e-68 UniRef50_B0TZS5 DNA polymerase IV n=14 Tax=Francisella RepID=DPO... 260 5e-68 UniRef50_Q03X78 Nucleotidyltransferase/DNA polymerase for DNA re... 260 8e-68 UniRef50_B2VS10 DNA polymerase IV n=3 Tax=Pleosporineae RepID=B2... 260 1e-67 UniRef50_Q8TIW3 DNA polymerase IV n=4 Tax=Methanosarcinaceae Rep... 260 1e-67 UniRef50_B1YIX5 DNA-directed DNA polymerase n=2 Tax=Exiguobacter... 259 1e-67 UniRef50_C8V695 Deoxycytidyl transferase (Eurofung) n=2 Tax=Emer... 259 1e-67 UniRef50_C0S277 DNA polymerase IV n=5 Tax=Onygenales RepID=C0S27... 259 1e-67 UniRef50_Q9UBZ9 DNA repair protein REV1 n=27 Tax=Tetrapoda RepID... 259 2e-67 UniRef50_C7MBE5 Nucleotidyltransferase/DNA polymerase involved i... 258 2e-67 UniRef50_B1VHB3 DNA polymerase IV n=1 Tax=Corynebacterium urealy... 258 3e-67 UniRef50_A6UXE7 Ultraviolet light resistance protein B n=1 Tax=P... 258 3e-67 UniRef50_Q1N612 DNA polymerase IV n=1 Tax=Bermanella marisrubri ... 257 5e-67 UniRef50_D2R9L6 ImpB/MucB/SamB family protein n=1 Tax=Gardnerell... 257 5e-67 UniRef50_UPI000186DDA3 terminal deoxycytidyl transferase rev1, p... 257 5e-67 UniRef50_D2P394 DNA polymerase V n=7 Tax=Listeria RepID=D2P394_L... 257 7e-67 UniRef50_B7GNF3 Transcriptional regulator, Fis family n=9 Tax=Bi... 256 7e-67 UniRef50_C3PHE2 DNA polymerase IV n=10 Tax=Corynebacterineae Rep... 256 8e-67 UniRef50_B9XRF0 DNA polymerase III, alpha subunit n=1 Tax=bacter... 256 1e-66 UniRef50_A7E7M1 Putative uncharacterized protein n=2 Tax=Sclerot... 255 2e-66 UniRef50_C5BNY2 DNA polymerase IV n=1 Tax=Teredinibacter turnera... 255 2e-66 UniRef50_Q6F1D8 DNA polymerase IV (PolIV) n=1 Tax=Mesoplasma flo... 255 2e-66 UniRef50_UPI000180C22E PREDICTED: similar to polymerase (DNA dir... 255 3e-66 UniRef50_C2HDM1 Possible DNA-directed DNA polymerase n=83 Tax=Fi... 255 3e-66 UniRef50_C5CJ42 DNA-directed DNA polymerase n=1 Tax=Kosmotoga ol... 255 4e-66 UniRef50_B8M4C5 DNA-directed polymerase kappa, putative n=14 Tax... 254 4e-66 UniRef50_UPI0001C32444 DNA-directed DNA polymerase n=1 Tax=Conex... 254 5e-66 UniRef50_Q7NAR2 UmuC/DinP-like n=1 Tax=Mycoplasma gallisepticum ... 253 7e-66 UniRef50_A6DIV6 DNA polymerase IV n=1 Tax=Lentisphaera araneosa ... 253 9e-66 UniRef50_A4VCZ3 DNA polymerase IV / kappa n=1 Tax=Tetrahymena th... 253 1e-65 UniRef50_A9V4K7 Predicted protein n=1 Tax=Monosiga brevicollis R... 253 1e-65 UniRef50_B2AY86 Predicted CDS Pa_1_10240 n=3 Tax=Sordariomycetes... 253 1e-65 UniRef50_A1A051 DNA-damage-inducible protein P n=10 Tax=Bifidoba... 252 2e-65 UniRef50_B6K5W3 DNA polymerase kappa n=2 Tax=cellular organisms ... 251 3e-65 UniRef50_A7HFE4 DNA-directed DNA polymerase n=1 Tax=Anaeromyxoba... 251 3e-65 UniRef50_A3NBC4 DNA polymerase IV n=15 Tax=pseudomallei group Re... 251 3e-65 UniRef50_B7QCT1 Terminal deoxycytidyl transferase rev1, putative... 251 4e-65 UniRef50_Q47E66 UMUC-like DNA-repair protein n=2 Tax=Betaproteob... 251 5e-65 UniRef50_C1I721 DNA-damage repair protein n=1 Tax=Clostridium sp... 250 8e-65 UniRef50_D2LRT2 DNA-directed DNA polymerase n=3 Tax=Bacillus Rep... 250 1e-64 UniRef50_B6Q7Y5 DNA-directed polymerase kappa, putative n=2 Tax=... 249 1e-64 UniRef50_Q5Q9H0 Polymerase kappa isoform 9 n=3 Tax=Murinae RepID... 249 1e-64 UniRef50_UPI0000D862D7 hypothetical protein CIMG_01093 n=1 Tax=C... 249 1e-64 UniRef50_B9LT67 UMUC domain protein DNA-repair protein n=3 Tax=H... 249 2e-64 UniRef50_B4MLB6 GK17515 n=1 Tax=Drosophila willistoni RepID=B4ML... 249 2e-64 UniRef50_C6WX69 DNA-directed DNA polymerase n=1 Tax=Methylotener... 249 2e-64 UniRef50_C1F7T1 ImpB/MucB/SamB family protein n=1 Tax=Acidobacte... 248 2e-64 UniRef50_D2VFM3 Predicted protein n=1 Tax=Naegleria gruberi RepI... 248 3e-64 UniRef50_A4QFK8 DNA polymerase IV n=28 Tax=Actinomycetales RepID... 248 3e-64 UniRef50_B7CAT7 Putative uncharacterized protein n=2 Tax=Erysipe... 248 4e-64 UniRef50_D1HMR5 Whole genome shotgun sequence of line PN40024, s... 247 5e-64 UniRef50_D1BHR1 Nucleotidyltransferase/DNA polymerase involved i... 247 5e-64 UniRef50_Q3II35 DNA polymerase IV n=3 Tax=Alteromonadales RepID=... 247 5e-64 UniRef50_Q2HFL9 Putative uncharacterized protein n=1 Tax=Chaetom... 246 8e-64 UniRef50_C1A9Y5 DNA polymerase IV n=1 Tax=Gemmatimonas aurantiac... 246 8e-64 UniRef50_B0R4P0 DNA polymerase IV n=7 Tax=Halobacteriaceae RepID... 246 1e-63 UniRef50_Q29DW0 GA11465 n=3 Tax=Drosophila RepID=Q29DW0_DROPS 246 1e-63 UniRef50_Q7Q6B2 AGAP005939-PA n=2 Tax=Culicidae RepID=Q7Q6B2_ANOGA 246 1e-63 UniRef50_C3WGR0 DNA polymerase IV n=6 Tax=Fusobacterium RepID=C3... 246 1e-63 UniRef50_D2R017 DNA-directed DNA polymerase n=2 Tax=Planctomycet... 246 2e-63 UniRef50_C7DHN7 DNA-directed DNA polymerase n=1 Tax=Candidatus M... 246 2e-63 UniRef50_A9A3A9 DNA polymerase IV n=6 Tax=Thaumarchaeota RepID=D... 245 2e-63 UniRef50_A9BNM1 DNA-directed DNA polymerase n=34 Tax=Betaproteob... 245 2e-63 UniRef50_B6Q3Z2 DNA damage repair protein Mus42, putative n=5 Ta... 245 3e-63 UniRef50_A4RF27 Putative uncharacterized protein n=1 Tax=Magnapo... 245 3e-63 UniRef50_B0D2Y9 Predicted protein n=3 Tax=Agaricales RepID=B0D2Y... 244 5e-63 UniRef50_A9UNE7 GH11153p (Fragment) n=8 Tax=Drosophila RepID=A9U... 243 9e-63 UniRef50_A5IXL3 DNA damage repair protein MucB n=1 Tax=Mycoplasm... 242 2e-62 UniRef50_Q4KWZ7 REV1 protein n=9 Tax=Euteleostomi RepID=Q4KWZ7_C... 242 2e-62 UniRef50_A6C5Y5 UMUC-like DNA-repair protein n=1 Tax=Planctomyce... 242 2e-62 UniRef50_C1XFZ1 Nucleotidyltransferase/DNA polymerase involved i... 242 2e-62 UniRef50_D1Y4D1 DNA polymerase IV n=1 Tax=Pyramidobacter piscole... 241 3e-62 UniRef50_D1WCN2 Nucleotidyltransferase/DNA polymerase for DNA re... 241 4e-62 UniRef50_C4G2M8 Putative uncharacterized protein n=1 Tax=Abiotro... 241 4e-62 UniRef50_C8W7V4 UMUC domain protein DNA-repair protein n=12 Tax=... 241 4e-62 UniRef50_P63988 DNA polymerase IV 2 n=20 Tax=Corynebacterineae R... 241 5e-62 UniRef50_A0QHM7 DNA polymerase IV 1 n=8 Tax=Corynebacterineae Re... 241 5e-62 UniRef50_A0D236 Chromosome undetermined scaffold_35, whole genom... 241 5e-62 UniRef50_Q041Q9 Nucleotidyltransferase/DNA polymerase for DNA re... 240 7e-62 UniRef50_C4LI62 DNA polymerase IV n=1 Tax=Corynebacterium kroppe... 240 9e-62 UniRef50_C9AAQ9 DNA directed DNA polymerase n=4 Tax=Enterococcus... 240 9e-62 UniRef50_A1SN18 DNA-directed DNA polymerase n=13 Tax=Actinomycet... 240 1e-61 UniRef50_Q03R40 Nucleotidyltransferase/DNA polymerase for DNA re... 240 1e-61 UniRef50_UPI0001B7B957 DinB1 protein n=3 Tax=Euteleostomi RepID=... 239 1e-61 UniRef50_C1XR91 Nucleotidyltransferase/DNA polymerase involved i... 239 2e-61 UniRef50_C4M8P4 Deoxycytidyl transferase, putative n=2 Tax=Entam... 238 2e-61 UniRef50_B5BUV5 DNA polymerase kappa n=2 Tax=Agaricales RepID=B5... 238 3e-61 UniRef50_O94623 DNA repair protein rev1 n=1 Tax=Schizosaccharomy... 238 3e-61 UniRef50_Q03AC9 Nucleotidyltransferase/DNA polymerase for DNA re... 238 3e-61 UniRef50_A9NFG9 DNA polymerase IV n=1 Tax=Acholeplasma laidlawii... 238 4e-61 UniRef50_O74944 DNA polymerase kappa n=1 Tax=Schizosaccharomyces... 237 5e-61 UniRef50_Q8REB0 DNA polymerase IV n=8 Tax=Fusobacterium RepID=DP... 237 7e-61 UniRef50_C4FT17 Putative uncharacterized protein n=3 Tax=Firmicu... 237 7e-61 UniRef50_A0AM11 Complete genome n=24 Tax=Listeria RepID=A0AM11_L... 236 1e-60 UniRef50_A2FMN4 ImpB/MucB/SamB family protein n=1 Tax=Trichomona... 236 2e-60 UniRef50_A4RZX2 Predicted protein (Fragment) n=2 Tax=Ostreococcu... 235 2e-60 UniRef50_UPI0000F2F527 DNA-directed DNA polymerase n=1 Tax=Acine... 235 3e-60 UniRef50_B0D0P7 Predicted protein n=1 Tax=Laccaria bicolor S238N... 235 4e-60 UniRef50_D2QRX3 DNA-directed DNA polymerase n=1 Tax=Spirosoma li... 234 4e-60 UniRef50_A4S3F0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 234 4e-60 UniRef50_D1BPP8 UMUC domain protein DNA-repair protein n=3 Tax=V... 234 5e-60 UniRef50_A8VWB3 DNA-directed DNA polymerase n=1 Tax=Bacillus sel... 234 6e-60 UniRef50_D2RTA3 DNA-directed DNA polymerase n=1 Tax=Haloterrigen... 233 8e-60 UniRef50_A2DLM9 ImpB/MucB/SamB family protein n=1 Tax=Trichomona... 233 1e-59 UniRef50_A8Z6F4 Umuc domain protein dna-repair protein n=2 Tax=C... 233 1e-59 UniRef50_C1A0W3 DNA polymerase IV n=9 Tax=Corynebacterineae RepI... 232 2e-59 UniRef50_Q5K8U2 Putative uncharacterized protein n=3 Tax=Agarico... 232 2e-59 UniRef50_C4Z6F8 DNA polymerase V n=1 Tax=Eubacterium eligens ATC... 232 2e-59 UniRef50_B7P2Q3 DNA polymerase IV / kappa, putative n=1 Tax=Ixod... 232 2e-59 UniRef50_C8WYD4 DNA-directed DNA polymerase n=4 Tax=Alicyclobaci... 231 3e-59 UniRef50_Q4P422 Putative uncharacterized protein n=1 Tax=Ustilag... 231 3e-59 UniRef50_Q8RNE6 UmuC protein (Fragment) n=6 Tax=Proteobacteria R... 230 6e-59 UniRef50_Q09615 Protein ZK675.2, partially confirmed by transcri... 230 7e-59 UniRef50_C7N9E0 DNA-directed DNA polymerase n=5 Tax=Fusobacteria... 230 8e-59 UniRef50_B6HNR2 Pc21g13870 protein n=17 Tax=Leotiomyceta RepID=B... 230 8e-59 UniRef50_C8PJM6 DNA polymerase IV n=1 Tax=Campylobacter gracilis... 230 1e-58 UniRef50_Q4S0P1 Chromosome 2 SCAF14781, whole genome shotgun seq... 230 1e-58 UniRef50_Q4Q8C4 DNA polymerase kappa, putative (Dna polymerase i... 229 2e-58 UniRef50_Q568P0 Zgc:110185 n=3 Tax=Clupeocephala RepID=Q568P0_DANRE 228 2e-58 UniRef50_Q9UNA4 DNA polymerase iota n=24 Tax=Chordata RepID=POLI... 228 3e-58 UniRef50_C5MCF2 Putative uncharacterized protein n=1 Tax=Candida... 228 4e-58 UniRef50_C7I020 DNA-directed DNA polymerase n=1 Tax=Thiomonas in... 227 5e-58 UniRef50_Q6C2B9 YALI0F09141p n=1 Tax=Yarrowia lipolytica RepID=Q... 227 6e-58 UniRef50_C1DYT2 Predicted protein (Fragment) n=2 Tax=Micromonas ... 226 8e-58 UniRef50_UPI0000DB6FEF PREDICTED: similar to DNApol- CG7602-PA, ... 226 1e-57 UniRef50_D1AVL7 DNA-directed DNA polymerase n=1 Tax=Streptobacil... 226 1e-57 UniRef50_C3AWZ9 DNA-damage repair protein n=3 Tax=Bacillus cereu... 226 1e-57 UniRef50_B0UY97 Novel protein similar to vertebrate REV1 homolog... 226 1e-57 UniRef50_UPI0001745AF1 DNA-directed DNA polymerase n=1 Tax=Verru... 226 2e-57 UniRef50_UPI00017B5397 UPI00017B5397 related cluster n=1 Tax=Tet... 225 3e-57 UniRef50_C9RQ99 UMUC domain protein DNA-repair protein n=1 Tax=F... 225 3e-57 UniRef50_A6Q1N4 DNA polymerase IV n=1 Tax=Nitratiruptor sp. SB15... 224 3e-57 UniRef50_C8WH43 UMUC domain protein DNA-repair protein n=3 Tax=B... 224 6e-57 UniRef50_UPI00006A0370 DNA repair protein REV1 (EC 2.7.7.-) (Rev... 223 8e-57 UniRef50_B1AJ79 DNA polymerase IV n=15 Tax=Ureaplasma RepID=DPO4... 223 8e-57 UniRef50_C4XEA8 Putative uncharacterized protein n=1 Tax=Mycopla... 223 8e-57 UniRef50_Q2BYP9 Nucleotidyltransferase/DNA polymerase involved i... 223 8e-57 UniRef50_A8EUX3 DNA polymerase IV n=1 Tax=Arcobacter butzleri RM... 223 1e-56 UniRef50_Q5QZ82 DinP n=2 Tax=Idiomarina RepID=Q5QZ82_IDILO 223 1e-56 UniRef50_B4WAK0 ImpB/MucB/SamB family n=1 Tax=Brevundimonas sp. ... 223 1e-56 UniRef50_A3GH67 DNA repair protein n=2 Tax=Pichia stipitis RepID... 222 2e-56 UniRef50_A8PXZ2 Putative uncharacterized protein n=1 Tax=Malasse... 222 2e-56 UniRef50_Q0FDK2 UMUC-like DNA-repair protein n=1 Tax=Rhodobacter... 222 2e-56 UniRef50_Q4D5I0 DNA polymerase kappa, putative n=4 Tax=Trypanoso... 222 2e-56 UniRef50_B3PM57 Pol_IV_kappa DNA polymerase n=1 Tax=Mycoplasma a... 222 2e-56 UniRef50_Q0IJ37 DNA polymerase iota n=5 Tax=Eukaryota RepID=Q0IJ... 222 2e-56 UniRef50_A5DN15 Putative uncharacterized protein n=2 Tax=Pichia ... 221 3e-56 UniRef50_C5SGU5 DNA-directed DNA polymerase n=1 Tax=Asticcacauli... 221 5e-56 UniRef50_B5X367 DNA polymerase iota n=1 Tax=Salmo salar RepID=B5... 220 6e-56 UniRef50_Q0F3E1 ImpB/MucB/SamB family protein n=2 Tax=Mariprofun... 220 7e-56 UniRef50_B9DUB9 ImpB/mucB/samB family n=26 Tax=root RepID=B9DUB9... 219 1e-55 UniRef50_A6DEG1 DNA-directed DNA polymerase n=1 Tax=Caminibacter... 219 1e-55 UniRef50_B3RS03 Putative uncharacterized protein n=1 Tax=Trichop... 219 1e-55 UniRef50_D0L509 DNA-directed DNA polymerase n=2 Tax=Corynebacter... 219 2e-55 UniRef50_C4R1P8 Deoxycytidyl transferase, forms a complex with t... 218 2e-55 UniRef50_A8IAM0 DNA polymerase kappa (Fragment) n=1 Tax=Chlamydo... 218 2e-55 UniRef50_A5EBX2 DNA polymerase IV (Pol IV 3) n=2 Tax=Bradyrhizob... 218 3e-55 UniRef50_C2D8D4 Possible DNA-directed DNA polymerase n=1 Tax=Ato... 218 4e-55 UniRef50_D0A851 DNA polymerase kappa, putative n=17 Tax=Trypanos... 217 8e-55 UniRef50_B6K5D4 DNA polymerase IV n=1 Tax=Schizosaccharomyces ja... 216 1e-54 UniRef50_B8P0X5 Predicted protein (Fragment) n=1 Tax=Postia plac... 215 2e-54 UniRef50_B7GAF1 Predicted protein n=1 Tax=Phaeodactylum tricornu... 215 2e-54 UniRef50_Q1Q0T1 Putative uncharacterized protein n=1 Tax=Candida... 215 3e-54 UniRef50_A5E4H3 Putative uncharacterized protein n=1 Tax=Loddero... 215 3e-54 UniRef50_UPI0000D5778B PREDICTED: similar to DNA polymerase eta ... 214 7e-54 UniRef50_C4XZD9 Putative uncharacterized protein n=1 Tax=Clavisp... 213 7e-54 UniRef50_A6QA22 DNA polymerase IV n=1 Tax=Sulfurovum sp. NBC37-1... 213 9e-54 UniRef50_C4Q7Z3 Terminal deoxycytidyl transferase rev1, putative... 213 1e-53 UniRef50_B9WGP7 DNA repair protein, putative (Deoxycytidyl trans... 212 2e-53 UniRef50_A3ZXX8 ImpB/MucB/SamB family protein n=2 Tax=Planctomyc... 212 2e-53 UniRef50_Q5JLR9 Os01g0757800 protein n=3 Tax=Oryza sativa Japoni... 211 3e-53 UniRef50_UPI0000E48503 PREDICTED: hypothetical protein n=1 Tax=S... 211 4e-53 UniRef50_UPI0000167505 COG0389: Nucleotidyltransferase/DNA polym... 211 5e-53 UniRef50_A6X194 DNA-directed DNA polymerase n=5 Tax=Alphaproteob... 211 5e-53 UniRef50_B3QD61 DNA-directed DNA polymerase n=6 Tax=cellular org... 210 6e-53 UniRef50_D2JWS9 Putative DNA-directed polymerase kappa n=1 Tax=F... 210 8e-53 UniRef50_A7SBP1 Predicted protein (Fragment) n=1 Tax=Nematostell... 210 8e-53 UniRef50_C3DVJ9 DNA-damage repair protein n=5 Tax=Bacillus RepID... 210 9e-53 UniRef50_C1E418 Predicted protein (Fragment) n=2 Tax=Micromonas ... 210 9e-53 UniRef50_D1J7R2 DNA-damage repair protein MucB n=1 Tax=Mycoplasm... 210 1e-52 UniRef50_A0LGS2 DNA-directed DNA polymerase n=1 Tax=Syntrophobac... 209 1e-52 UniRef50_Q98R22 DNA-DAMAGE REPAIR PROTEIN MUCB n=1 Tax=Mycoplasm... 209 1e-52 UniRef50_A3TNV0 Putative uncharacterized protein n=1 Tax=Janibac... 209 1e-52 UniRef50_A8PB46 ImpB/MucB/SamB family protein n=1 Tax=Brugia mal... 209 2e-52 UniRef50_B8BXL1 REV1 protein n=1 Tax=Thalassiosira pseudonana Re... 208 3e-52 UniRef50_B9L8S0 DNA-directed DNA polymerase n=1 Tax=Nautilia pro... 208 4e-52 UniRef50_B3RQD9 Putative uncharacterized protein n=1 Tax=Trichop... 208 4e-52 UniRef50_D1I1G6 Whole genome shotgun sequence of line PN40024, s... 207 8e-52 UniRef50_A9UXX3 Predicted protein (Fragment) n=2 Tax=Eukaryota R... 206 2e-51 UniRef50_B7AW77 Putative uncharacterized protein n=3 Tax=Bacteri... 205 2e-51 UniRef50_A4YEC1 DNA polymerase IV n=18 Tax=Sulfolobaceae RepID=D... 205 2e-51 UniRef50_UPI0000DB76DA PREDICTED: similar to Rev1 CG12189-PA n=1... 205 3e-51 UniRef50_C6HJM8 DNA damage repair protein Mus42 n=1 Tax=Ajellomy... 204 4e-51 UniRef50_C5DG10 KLTH0D01518p n=1 Tax=Lachancea thermotolerans CB... 204 5e-51 UniRef50_A8IYH8 Deoxycytidyl transferase n=1 Tax=Chlamydomonas r... 203 1e-50 UniRef50_A4HGJ3 DNA polymerase kappa, putative n=4 Tax=Trypanoso... 203 1e-50 UniRef50_A0RN38 DNA polymerase IV 1, putative n=1 Tax=Campylobac... 203 1e-50 UniRef50_C5DV83 ZYRO0D04664p n=1 Tax=Zygosaccharomyces rouxii Re... 203 2e-50 UniRef50_B7LX10 Protein impB n=4 Tax=Enterobacteriaceae RepID=B7... 202 2e-50 UniRef50_A5BB36 Putative uncharacterized protein n=1 Tax=Vitis v... 202 2e-50 UniRef50_Q7NUT5 UmuC protein n=1 Tax=Chromobacterium violaceum R... 201 3e-50 UniRef50_Q6BS95 DEHA2D10560p n=2 Tax=Debaryomyces hansenii RepID... 201 3e-50 UniRef50_D2BP58 ImpB/MucB/SamB family protein n=7 Tax=Firmicutes... 201 4e-50 UniRef50_A8ZS28 DNA-directed DNA polymerase n=1 Tax=Desulfococcu... 200 7e-50 UniRef50_B5J6A6 ImpB/MucB/SamB family n=1 Tax=Octadecabacter ant... 200 8e-50 UniRef50_A9KJA2 UMUC domain protein DNA-repair protein n=25 Tax=... 199 1e-49 UniRef50_Q6KZW2 DNA polymerase IV n=1 Tax=Picrophilus torridus R... 199 2e-49 UniRef50_UPI0000D56959 PREDICTED: similar to DNA polymerase iota... 198 2e-49 UniRef50_Q6KI15 DNA-damage repair protein n=1 Tax=Mycoplasma mob... 198 3e-49 UniRef50_Q30PG7 DNA-directed DNA polymerase n=2 Tax=Campylobacte... 197 7e-49 UniRef50_Q54KS3 UMUC-like DNA-repair protein n=1 Tax=Dictyosteli... 197 8e-49 UniRef50_Q7QBI8 AGAP003157-PA (Fragment) n=3 Tax=Culicidae RepID... 196 1e-48 UniRef50_Q8EWQ4 DNA-damage repair protein MucB n=1 Tax=Mycoplasm... 196 1e-48 UniRef50_P75241 Uncharacterized protein MG360 homolog n=3 Tax=My... 196 2e-48 UniRef50_Q4PCE3 Putative uncharacterized protein n=1 Tax=Ustilag... 196 2e-48 UniRef50_UPI00017E10E6 DNA-directed DNA polymerase eta n=2 Tax=A... 195 2e-48 UniRef50_P34409 DNA polymerase kappa n=6 Tax=Chromadorea RepID=P... 195 3e-48 UniRef50_B3RPL1 Putative uncharacterized protein (Fragment) n=1 ... 194 4e-48 UniRef50_Q6CIW8 KLLA0F23375p n=1 Tax=Kluyveromyces lactis RepID=... 193 8e-48 UniRef50_C5KD43 DNA polymerase IV, putative n=3 Tax=Perkinsus ma... 193 9e-48 UniRef50_Q9VHV1 DNApol-iota, isoform A n=12 Tax=Drosophila RepID... 193 1e-47 UniRef50_O48586 DNA-damage-inducible protein P n=6 Tax=Embryophy... 193 2e-47 UniRef50_C9KLN2 UV-damage repair protein n=1 Tax=Mitsuokella mul... 192 2e-47 UniRef50_D1R481 Putative uncharacterized protein n=1 Tax=Parachl... 192 2e-47 UniRef50_Q3A3S4 Nucleotidyltransferase/DNA polymerase n=1 Tax=Pe... 192 2e-47 UniRef50_B8C7E7 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 191 4e-47 UniRef50_P12689 DNA repair protein REV1 n=7 Tax=Saccharomyces ce... 191 4e-47 UniRef50_C0WCL1 DNA-repair protein n=1 Tax=Acidaminococcus sp. D... 191 5e-47 UniRef50_A8ND78 ImpB/MucB/SamB family protein n=1 Tax=Brugia mal... 190 7e-47 UniRef50_UPI0001792F1F PREDICTED: similar to polymerase (DNA dir... 189 1e-46 UniRef50_UPI000180D06B PREDICTED: similar to GH15415 n=1 Tax=Cio... 189 1e-46 UniRef50_A8PR16 Putative uncharacterized protein n=1 Tax=Malasse... 189 2e-46 UniRef50_B9KDE6 UV damage repair protein, ImpB/MucB/SamB family ... 188 5e-46 UniRef50_C2KWD3 ImpB/MucB/SamB family DNA-damage repair protein ... 187 7e-46 UniRef50_C6DZL5 DNA-directed DNA polymerase n=3 Tax=Geobacter Re... 187 7e-46 UniRef50_Q759A8 ADR369Cp n=1 Tax=Eremothecium gossypii RepID=Q75... 186 1e-45 UniRef50_B7FT83 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 185 2e-45 UniRef50_C2JSZ5 Possible DNA-directed DNA polymerase (Fragment) ... 185 2e-45 UniRef50_D0SQN6 Predicted protein n=1 Tax=Acinetobacter junii SH... 184 4e-45 UniRef50_A8BDY9 DINP protein human, muc B family n=2 Tax=Giardia... 184 4e-45 UniRef50_D2RJB9 UMUC domain protein DNA-repair protein n=4 Tax=B... 184 4e-45 UniRef50_Q4AAV0 DNA polymerase IV n=5 Tax=Mycoplasma hyopneumoni... 184 5e-45 UniRef50_C9SBX6 DNA polymerase IV n=1 Tax=Verticillium albo-atru... 183 8e-45 UniRef50_O17219 Polh (Dna polymerase eta) homolog protein 1, con... 183 1e-44 UniRef50_D0MYB5 DNA polymerase kappa, putative n=1 Tax=Phytophth... 183 1e-44 UniRef50_UPI000180C75E PREDICTED: similar to polymerase (DNA dir... 182 3e-44 UniRef50_C2EU55 UMUC domain protein DNA-repair protein n=3 Tax=L... 181 4e-44 UniRef50_Q4A688 DNA polymerase IV n=2 Tax=Mycoplasma synoviae 53... 181 4e-44 UniRef50_A7TRR0 Putative uncharacterized protein n=1 Tax=Vanderw... 181 6e-44 UniRef50_UPI0001850634 polymerase (DNA directed) iota n=1 Tax=Na... 181 6e-44 UniRef50_C5J784 DNA polymerase IV n=1 Tax=Mycoplasma conjunctiva... 180 9e-44 UniRef50_A4E7R3 Putative uncharacterized protein n=2 Tax=Collins... 179 1e-43 UniRef50_C3ZXE4 Putative uncharacterized protein (Fragment) n=1 ... 179 1e-43 UniRef50_B7GU73 UMUC domain protein DNA-repair protein n=32 Tax=... 177 5e-43 UniRef50_Q6FV13 Similar to uniprot|P12689 Saccharomyces cerevisi... 177 6e-43 UniRef50_UPI000038E47A DNA polymerase IV n=1 Tax=Ferroplasma aci... 177 6e-43 UniRef50_Q6R286 SOS inducible DNA polymerase (Fragment) n=15 Tax... 177 7e-43 UniRef50_C2KQG7 ImpB/MucB/SamB family DNA-damage repair protein ... 177 8e-43 UniRef50_D2VGP4 Predicted protein n=1 Tax=Naegleria gruberi RepI... 177 9e-43 UniRef50_A7AX68 ImpB/MucB/SamB family protein n=1 Tax=Babesia bo... 176 1e-42 UniRef50_C6VKK8 UV-damage repair protein n=17 Tax=Bacteria RepID... 176 2e-42 UniRef50_UPI0000397F7C COG0389: Nucleotidyltransferase/DNA polym... 176 2e-42 UniRef50_B2I405 Nucleotidyltransferase/DNA polymerase involved i... 176 2e-42 UniRef50_A0DAQ7 Chromosome undetermined scaffold_43, whole genom... 174 4e-42 UniRef50_O48585 Similarity to DNA-damage-inducible protein P n=2... 174 4e-42 UniRef50_B8NVT6 DNA-directed polymerase kappa, putative n=1 Tax=... 174 6e-42 UniRef50_B4H4B7 GL20704 n=1 Tax=Drosophila persimilis RepID=B4H4... 172 2e-41 UniRef50_Q5Q9H1 Polymerase kappa isoform 8 n=14 Tax=Eumetazoa Re... 171 6e-41 UniRef50_Q6DCL9 Polh-prov protein n=4 Tax=Tetrapoda RepID=Q6DCL9... 169 2e-40 UniRef50_D0NYK2 Putative uncharacterized protein n=1 Tax=Phytoph... 167 5e-40 UniRef50_Q17IT1 Terminal deoxycytidyl transferase rev1 n=1 Tax=A... 167 6e-40 UniRef50_B9SQ81 DNA polymerase eta, putative n=1 Tax=Ricinus com... 167 6e-40 UniRef50_A4EK23 DNA polymerase IV-AMBIGUITY n=3 Tax=Rhodobactera... 167 9e-40 UniRef50_B2VTY6 Sister chromatid cohesion protein Eso1 n=8 Tax=L... 167 1e-39 UniRef50_B6VBS6 Putative uncharacterized protein n=1 Tax=Caenorh... 166 1e-39 UniRef50_A4HNL7 DNA damage repair protein, putative n=3 Tax=Leis... 164 4e-39 UniRef50_Q4DBR5 DNA damage repair protein, putative n=4 Tax=Tryp... 164 7e-39 UniRef50_A8JCD8 DNA polymerase eta/iota n=1 Tax=Chlamydomonas re... 162 2e-38 UniRef50_D1BE66 Nucleotidyltransferase/DNA polymerase involved i... 162 3e-38 UniRef50_B7QI10 DNA polymerase eta, putative n=2 Tax=Ixodes scap... 161 4e-38 UniRef50_C5LMV6 Dna polymerase eta, putative n=1 Tax=Perkinsus m... 161 4e-38 UniRef50_D1C5S3 DNA-directed DNA polymerase n=1 Tax=Sphaerobacte... 160 8e-38 UniRef50_B9Q7A7 Terminal deoxycytidyl transferase rev1, putative... 159 3e-37 UniRef50_Q828V5 Putative uncharacterized protein n=3 Tax=Strepto... 158 3e-37 UniRef50_C4VB58 Putative uncharacterized protein n=1 Tax=Nosema ... 158 3e-37 UniRef50_B4QLD4 GD13564 n=1 Tax=Drosophila simulans RepID=B4QLD4... 158 4e-37 UniRef50_A3VTP3 ImpB/MucB/SamB family protein n=1 Tax=Parvularcu... 157 8e-37 UniRef50_C4Q962 Rab geranylgeranyl transferase alpha subunit, pu... 157 8e-37 UniRef50_C4ZE13 DNA-directed DNA polymerase n=1 Tax=Eubacterium ... 157 9e-37 UniRef50_Q1RLS3 Zgc:136881 n=6 Tax=Clupeocephala RepID=Q1RLS3_DANRE 156 2e-36 UniRef50_UPI000192707B PREDICTED: similar to predicted protein, ... 155 3e-36 UniRef50_Q4SL60 Chromosome 17 SCAF14563, whole genome shotgun se... 154 4e-36 UniRef50_UPI0001926C03 PREDICTED: similar to polymerase (DNA dir... 153 1e-35 UniRef50_A7I053 DNA-directed DNA polymerase n=1 Tax=Campylobacte... 153 1e-35 UniRef50_Q9Y253 DNA polymerase eta n=14 Tax=Amniota RepID=POLH_H... 153 1e-35 UniRef50_A4I3M2 DNA polymerase kappa, putative n=2 Tax=Leishmani... 152 2e-35 UniRef50_C8VB00 DNA polymerase eta (Eurofung) n=19 Tax=Eurotiomy... 152 2e-35 UniRef50_B6HVX2 Pc22g06410 protein n=8 Tax=Trichocomaceae RepID=... 151 4e-35 UniRef50_C0WP28 Possible DNA-directed DNA polymerase n=3 Tax=Lac... 151 4e-35 UniRef50_A9SDY0 Predicted protein n=1 Tax=Physcomitrella patens ... 151 6e-35 UniRef50_B2ABI5 Predicted CDS Pa_1_20790 n=4 Tax=Sordariomycetes... 151 6e-35 UniRef50_B4VAW5 Putative uncharacterized protein n=1 Tax=Strepto... 150 7e-35 UniRef50_C6VUA5 Nucleotidyltransferase/DNA polymerase involved i... 149 3e-34 UniRef50_O42917 N-acetyltransferase eso1 n=1 Tax=Schizosaccharom... 148 4e-34 UniRef50_B7FW32 Predicted protein n=1 Tax=Phaeodactylum tricornu... 148 4e-34 UniRef50_B6K7S5 Sister chromatid cohesion protein Eso1 n=1 Tax=S... 147 5e-34 UniRef50_C0SPA8 DNA repair protein homolog yobH n=15 Tax=root Re... 147 6e-34 UniRef50_A2QJ22 Contig An04c0170, complete genome n=2 Tax=Asperg... 146 1e-33 UniRef50_C3RLA4 DNA polymerase IV n=4 Tax=Bacteria RepID=C3RLA4_... 146 1e-33 UniRef50_A4RZL9 Predicted protein n=1 Tax=Ostreococcus lucimarin... 146 2e-33 UniRef50_A7HW56 Nucleotidyltransferase/DNA polymerase n=1 Tax=Pa... 146 2e-33 UniRef50_UPI0001B4E7CA hypothetical protein SvirD4_08371 n=2 Tax... 145 2e-33 UniRef50_D1WSU8 DNA-directed DNA polymerase n=3 Tax=Streptomyces... 145 3e-33 UniRef50_A4S4R4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 145 4e-33 UniRef50_A0NRW5 Putative uncharacterized protein n=1 Tax=Labrenz... 144 4e-33 UniRef50_C1SJI9 Nucleotidyltransferase/DNA polymerase involved i... 144 7e-33 UniRef50_Q2TTW3 UmuC n=8 Tax=Enterobacteriaceae RepID=Q2TTW3_ECOLX 144 7e-33 UniRef50_B0NK47 Putative uncharacterized protein n=1 Tax=Clostri... 144 8e-33 UniRef50_B6BEE1 Nucleotidyltransferase/DNA polymerase involved i... 143 1e-32 UniRef50_B2I406 Nucleotidyltransferase/DNA polymerase involved i... 142 2e-32 UniRef50_A8LY61 UMUC domain protein DNA-repair protein n=24 Tax=... 141 4e-32 UniRef50_B9JES9 Nucleotidyltransferase protein n=14 Tax=Rhizobia... 141 5e-32 UniRef50_D0CTA7 Nucleotidyltransferase/DNA polymerase involved i... 141 6e-32 UniRef50_UPI0000D878BE hypothetical protein CIMG_06713 n=1 Tax=C... 140 1e-31 UniRef50_C8VFX8 DNA polymerase iota, putative (AFU_orthologue; A... 139 2e-31 UniRef50_Q3SQD1 DNA-directed DNA polymerase n=14 Tax=Bradyrhizob... 139 3e-31 UniRef50_B5H9Q9 Putative uncharacterized protein n=1 Tax=Strepto... 138 3e-31 UniRef50_C8XBY5 UMUC domain protein DNA-repair protein n=23 Tax=... 138 5e-31 UniRef50_A5VH01 Nucleotidyltransferase/DNA polymerase involved i... 137 5e-31 UniRef50_C6XYX1 Cytosolic protein n=4 Tax=Sphingobacteriales Rep... 137 6e-31 UniRef50_A9H958 Putative uncharacterized protein n=3 Tax=Alphapr... 137 6e-31 UniRef50_Q5Q9G7 Polymerase kappa isoform 2 n=34 Tax=Deuterostomi... 136 1e-30 UniRef50_Q9UBT6 DNA polymerase kappa n=23 Tax=Tetrapoda RepID=PO... 136 1e-30 UniRef50_B9KR94 DNA repair enzyme n=4 Tax=Rhodobacter sphaeroide... 136 1e-30 UniRef50_C4Q445 DNA polymerase eta, putative n=3 Tax=Schistosoma... 136 2e-30 UniRef50_UPI00019063AA putative nucleotidyltransferase protein n... 135 3e-30 UniRef50_B5HS70 Putative uncharacterized protein n=1 Tax=Strepto... 134 5e-30 UniRef50_Q99QR3 Putative uncharacterized protein SCP1.321 n=4 Ta... 134 5e-30 UniRef50_A4XTN1 Nucleotidyltransferase/DNA polymerase involved i... 134 7e-30 UniRef50_Q0V979 Zgc:136881 n=6 Tax=Eumetazoa RepID=Q0V979_DANRE 132 2e-29 UniRef50_B1LUJ0 Putative uncharacterized protein n=1 Tax=Methylo... 132 2e-29 UniRef50_Q0G3S1 Putative uncharacterized protein n=1 Tax=Fulvima... 132 2e-29 UniRef50_A0LTK7 Putative uncharacterized protein n=1 Tax=Acidoth... 131 4e-29 UniRef50_B2AJW9 Putative DNA polymerase, Y family n=8 Tax=Burkho... 131 7e-29 UniRef50_A4TZ00 UmuC protein n=1 Tax=Magnetospirillum gryphiswal... 130 9e-29 UniRef50_C1E586 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 130 1e-28 UniRef50_D2LKT9 Nucleotidyltransferase/DNA polymerase involved i... 130 1e-28 UniRef50_D1SIT0 Nucleotidyltransferase/DNA polymerase involved i... 129 2e-28 UniRef50_D2Q395 Nucleotidyltransferase/DNA polymerase-like prote... 129 3e-28 UniRef50_C1EEZ5 Predicted protein (Fragment) n=1 Tax=Micromonas ... 129 3e-28 UniRef50_C7YPE8 Putative uncharacterized protein n=2 Tax=Nectria... 128 3e-28 UniRef50_C6XNZ3 Putative uncharacterized protein n=1 Tax=Hirschi... 128 4e-28 UniRef50_C9SAM9 Putative uncharacterized protein n=1 Tax=Vertici... 128 4e-28 UniRef50_C7DDU4 Nucleotidyltransferase/DNA polymerase involved i... 128 5e-28 UniRef50_D2LC32 Putative uncharacterized protein n=1 Tax=Rhodomi... 127 6e-28 UniRef50_C9SHT7 DNA polymerase IV n=1 Tax=Verticillium albo-atru... 127 9e-28 UniRef50_C4DV05 Nucleotidyltransferase/DNA polymerase involved i... 127 9e-28 UniRef50_D1ZXB0 C-terminus not complete (Fragment) n=1 Tax=Sorda... 127 1e-27 UniRef50_C4JRK3 Putative uncharacterized protein n=3 Tax=Onygena... 126 1e-27 UniRef50_B4DB63 Nucleotidyltransferase/DNA polymerase involved i... 126 2e-27 UniRef50_A0Z5A6 Aspartate decarboxylase n=1 Tax=marine gamma pro... 126 2e-27 UniRef50_Q1LFT0 Putative uncharacterized protein n=1 Tax=Cupriav... 125 2e-27 UniRef50_A1SHX1 Putative DNA-directed DNA polymerase n=1 Tax=Noc... 125 3e-27 UniRef50_C7CFB9 Putative DNA-directed DNA polymerase n=1 Tax=Met... 125 3e-27 UniRef50_D0XS46 Nucleotidyltransferase/DNA polymerase involved i... 125 4e-27 UniRef50_D1UT44 Putative uncharacterized protein n=1 Tax=Burkhol... 125 4e-27 UniRef50_Q9GNC0 DNA polymerase eta n=10 Tax=Drosophila RepID=Q9G... 125 4e-27 UniRef50_A2WV83 Putative uncharacterized protein n=1 Tax=Oryza s... 124 6e-27 UniRef50_D1X5H2 DNA-directed DNA polymerase n=1 Tax=Streptomyces... 124 6e-27 UniRef50_A9CXS2 Putative nucleotidyltransferase protein n=1 Tax=... 124 7e-27 UniRef50_B2T2I7 Putative uncharacterized protein n=3 Tax=Burkhol... 124 9e-27 UniRef50_Q1N9P2 Putative uncharacterized protein n=1 Tax=Sphingo... 123 1e-26 UniRef50_UPI00019102E2 DNA polymerase IV n=4 Tax=cellular organi... 122 2e-26 UniRef50_B8H428 Protein imuB n=6 Tax=Alphaproteobacteria RepID=I... 122 2e-26 UniRef50_B9NI90 Predicted protein n=36 Tax=cellular organisms Re... 122 2e-26 UniRef50_A5FTH4 Nucleotidyltransferase/DNA polymerase involved i... 122 2e-26 UniRef50_Q0UKS6 Putative uncharacterized protein n=1 Tax=Phaeosp... 122 3e-26 UniRef50_A5V5C0 Nucleotidyltransferase/DNA polymerase involved i... 121 4e-26 UniRef50_C0G3K2 Cytoplasmic protein n=39 Tax=Rhizobiales RepID=C... 121 5e-26 UniRef50_Q2Y5T6 Putative uncharacterized protein n=1 Tax=Nitroso... 120 8e-26 UniRef50_Q47EP4 Putative uncharacterized protein n=1 Tax=Dechlor... 120 8e-26 UniRef50_B4S261 Nucleotidyltransferase/DNA polymerase involved i... 120 9e-26 UniRef50_UPI0001874386 polymerase involved in DNA repair n=1 Tax... 120 1e-25 UniRef50_Q7PXH4 AGAP001404-PA n=4 Tax=Coelomata RepID=Q7PXH4_ANOGA 119 1e-25 UniRef50_B5GWK1 Putative uncharacterized protein n=1 Tax=Strepto... 119 2e-25 UniRef50_B2B126 Predicted CDS Pa_3_8130 n=2 Tax=Sordariales RepI... 119 2e-25 UniRef50_Q1YPI9 Putative uncharacterized protein n=1 Tax=gamma p... 119 2e-25 UniRef50_A1BA10 Putative uncharacterized protein n=6 Tax=Rhodoba... 119 2e-25 UniRef50_B3R9B4 Required for the error-prone processing of DNA l... 119 3e-25 UniRef50_B7S067 Putative uncharacterized protein n=1 Tax=marine ... 119 3e-25 UniRef50_Q2W2X2 Nucleotidyltransferase/DNA polymerase involved i... 118 3e-25 UniRef50_B0W8N7 DNA polymerase eta n=1 Tax=Culex quinquefasciatu... 118 4e-25 UniRef50_Q0ANL5 Putative uncharacterized protein n=1 Tax=Maricau... 117 6e-25 UniRef50_B1VF25 Putative DNA polymerase involved in DNA repair n... 117 6e-25 UniRef50_A7BC74 Putative uncharacterized protein n=1 Tax=Actinom... 117 9e-25 UniRef50_B7FSY6 Predicted protein n=1 Tax=Phaeodactylum tricornu... 117 9e-25 UniRef50_C1F5L8 Putative uncharacterized protein n=2 Tax=Acidoba... 117 1e-24 UniRef50_C6QBZ4 Putative uncharacterized protein n=1 Tax=Hyphomi... 117 1e-24 UniRef50_UPI0001AEC5B6 Nucleotidyltransferase/DNA polymerase inv... 116 1e-24 UniRef50_A4AKV5 Putative uncharacterized protein n=1 Tax=marine ... 116 2e-24 UniRef50_B7ANI6 Putative uncharacterized protein n=1 Tax=Bactero... 115 2e-24 UniRef50_B1ZZZ2 Nucleotidyltransferase/DNA polymerase involved i... 115 3e-24 UniRef50_B7ZA36 cDNA, FLJ79050, highly similar to DNA polymerase... 114 5e-24 UniRef50_A9UR36 Predicted protein n=1 Tax=Monosiga brevicollis R... 114 6e-24 UniRef50_B6R5I9 Protein ImuB n=1 Tax=Pseudovibrio sp. JE062 RepI... 114 9e-24 UniRef50_A8N619 Putative uncharacterized protein n=1 Tax=Coprino... 114 9e-24 UniRef50_A3JJR9 DinP DNA polymerase-like protein n=3 Tax=Marinob... 113 1e-23 UniRef50_B8ELP7 Putative uncharacterized protein n=1 Tax=Methylo... 113 2e-23 UniRef50_A4JFF8 Putative uncharacterized protein n=2 Tax=Burkhol... 112 2e-23 UniRef50_D0LH57 Putative uncharacterized protein n=1 Tax=Haliang... 112 2e-23 UniRef50_C7MCU6 Nucleotidyltransferase/DNA polymerase involved i... 112 2e-23 UniRef50_Q6NJ12 Putative uncharacterized protein n=1 Tax=Coryneb... 112 2e-23 UniRef50_A0YAE9 Putative uncharacterized protein n=1 Tax=marine ... 112 2e-23 UniRef50_Q0BZD3 Putative uncharacterized protein n=1 Tax=Hyphomo... 112 2e-23 UniRef50_A9VB80 Predicted protein n=1 Tax=Monosiga brevicollis R... 112 3e-23 UniRef50_D2DXS2 Nucleotidyltransferase/DNA polymerase n=1 Tax=un... 112 3e-23 UniRef50_Q92ZK0 Putative uncharacterized protein n=1 Tax=Sinorhi... 112 3e-23 UniRef50_A8B5P1 DNA damage repair protein n=2 Tax=Giardia intest... 112 3e-23 UniRef50_Q1IJA4 Nucleotidyltransferase/DNA polymerase involved i... 112 3e-23 UniRef50_B8K9K1 Nucleotidyltransferase/DNA polymerase involved i... 112 4e-23 UniRef50_D0LTL3 Nucleotidyltransferase/DNA polymerase involved i... 112 4e-23 UniRef50_UPI0001745839 nucleotidyltransferase/DNA polymerase inv... 111 4e-23 UniRef50_A9IPJ8 Putative uncharacterized protein n=4 Tax=Bordete... 111 4e-23 UniRef50_Q5QUT8 Homolog of DinP DNA polymerase involved in DNA r... 111 4e-23 UniRef50_Q2NAX5 Putative uncharacterized protein n=3 Tax=Erythro... 110 8e-23 UniRef50_C4LH03 Putative DNA polymerase involved in DNA repair n... 110 1e-22 UniRef50_Q1N4J7 Putative uncharacterized protein n=1 Tax=Bermane... 110 1e-22 UniRef50_C3KFQ7 Putative ultraviolet light resistance protein B ... 110 1e-22 UniRef50_B9QVQ0 Putative uncharacterized protein n=1 Tax=Labrenz... 110 1e-22 UniRef50_UPI00003828C5 COG0389: Nucleotidyltransferase/DNA polym... 109 2e-22 UniRef50_C7Q6R5 Putative uncharacterized protein n=1 Tax=Catenul... 109 2e-22 UniRef50_D0WMM1 Putative DNA repair polymerase n=1 Tax=Actinomyc... 109 2e-22 UniRef50_D1BHX8 Nucleotidyltransferase/DNA polymerase involved i... 108 4e-22 UniRef50_C0W385 DNA-repair protein n=1 Tax=Actinomyces urogenita... 108 4e-22 UniRef50_A7F1S2 Putative uncharacterized protein n=1 Tax=Sclerot... 108 5e-22 UniRef50_C8NM76 Polymerase involved in DNA repair n=15 Tax=Coryn... 107 7e-22 UniRef50_B4SMM0 Nucleotidyltransferase/DNA polymerase involved i... 107 7e-22 UniRef50_UPI0001C31AE4 hypothetical protein Cwoe_4251 n=1 Tax=Co... 107 8e-22 UniRef50_Q6BM10 DEHA2F09196p n=2 Tax=Debaryomyces hansenii RepID... 106 1e-21 UniRef50_Q6A779 Nucleotidyltransferase/DNA polymerase involved i... 105 2e-21 UniRef50_Q2SJZ5 Nucleotidyltransferase/DNA polymerase involved i... 105 2e-21 UniRef50_A3ZPQ4 Putative uncharacterized protein n=2 Tax=Plancto... 105 2e-21 UniRef50_C1G404 Putative uncharacterized protein n=3 Tax=Paracoc... 104 5e-21 UniRef50_Q14N03 Putative dna polymerase iv c-terminal truncated ... 104 8e-21 UniRef50_C5BVF2 DNA-repair protein n=2 Tax=Micrococcineae RepID=... 103 1e-20 UniRef50_B5BUV4 DNA polymerase eta n=4 Tax=Agaricales RepID=B5BU... 103 1e-20 UniRef50_A5DE10 Putative uncharacterized protein n=2 Tax=Pichia ... 103 1e-20 UniRef50_A2SG06 Putative uncharacterized protein n=2 Tax=Burkhol... 103 1e-20 UniRef50_B9PWD1 DNA polymerase eta, putative n=3 Tax=Toxoplasma ... 102 2e-20 UniRef50_A1VVG9 DNA-directed DNA polymerase n=1 Tax=Polaromonas ... 102 2e-20 UniRef50_D1R480 Putative uncharacterized protein n=1 Tax=Parachl... 102 3e-20 UniRef50_Q7MLY1 Uncharacterized protein conserved in bacteria n=... 102 3e-20 UniRef50_A9AEV1 Nucleotidyltransferase/DNA polymerase n=45 Tax=c... 102 3e-20 UniRef50_B8CNV0 Nucleotidyltransferase/DNA polymerase involved i... 101 5e-20 UniRef50_B5EJ93 Putative uncharacterized protein n=2 Tax=Acidith... 101 5e-20 UniRef50_B8KRW4 Putative uncharacterized protein n=1 Tax=gamma p... 101 6e-20 UniRef50_C8RUC9 DNA polymerase involved in DNA repair n=2 Tax=Co... 100 8e-20 UniRef50_B4VGM9 Putative uncharacterized protein n=2 Tax=Bacteri... 100 1e-19 UniRef50_C5BND7 Putative uncharacterized protein n=1 Tax=Teredin... 100 1e-19 UniRef50_C5JEX9 Sister chromatid cohesion protein n=2 Tax=Ajello... 100 1e-19 UniRef50_Q38C71 DNA polymerase eta, putative n=4 Tax=Trypanosoma... 100 2e-19 UniRef50_Q04049 DNA polymerase eta n=8 Tax=Saccharomycetaceae Re... 100 2e-19 UniRef50_C7R3Y5 Nucleotidyltransferase/DNA polymerase involved i... 100 2e-19 UniRef50_Q7R724 Putative uncharacterized protein PY07765 (Fragme... 99 2e-19 UniRef50_Q015X2 DNA polymerase iota/DNA damage inducible protein... 99 2e-19 UniRef50_C7CNB5 Putative uncharacterized protein n=1 Tax=Methylo... 99 3e-19 UniRef50_C5DLU3 KLTH0G03586p n=2 Tax=Saccharomycetaceae RepID=C5... 99 3e-19 UniRef50_C1E7T2 Umuc-like DNA repair protein n=1 Tax=Micromonas ... 98 5e-19 UniRef50_Q5KGG8 Eta DNA polymerase, putative n=2 Tax=Filobasidie... 98 7e-19 UniRef50_A3LN71 DNA polymerase eta subunit n=1 Tax=Pichia stipit... 97 9e-19 UniRef50_UPI0001BC2B48 hypothetical protein BlinB_00220 n=1 Tax=... 97 1e-18 UniRef50_Q6CDC9 YALI0C01573p n=1 Tax=Yarrowia lipolytica RepID=Q... 97 1e-18 UniRef50_C4Y9R5 Putative uncharacterized protein n=1 Tax=Clavisp... 97 1e-18 UniRef50_B9BQL7 UmuC protein n=2 Tax=Burkholderia multivorans Re... 96 2e-18 UniRef50_Q08N74 Nucleotidyltransferase/DNA polymerase involved i... 96 2e-18 UniRef50_Q3SEZ7 Putative uncharacterized protein n=1 Tax=Thiobac... 96 2e-18 UniRef50_C4QYV7 Putative uncharacterized protein n=1 Tax=Pichia ... 95 5e-18 UniRef50_A9FIX7 Putative uncharacterized protein n=1 Tax=Sorangi... 95 5e-18 UniRef50_Q86ZI6 Related to DNA Polymerase iota (POLI) n=3 Tax=So... 94 9e-18 UniRef50_Q7UJH7 Putative uncharacterized protein n=1 Tax=Rhodopi... 94 1e-17 UniRef50_Q5P4A3 Putative uncharacterized protein n=1 Tax=Aromato... 93 2e-17 UniRef50_Q4PF20 Putative uncharacterized protein n=1 Tax=Ustilag... 93 2e-17 UniRef50_Q4PIG2 Putative uncharacterized protein n=1 Tax=Ustilag... 92 3e-17 UniRef50_C7X3F8 UvrA n=3 Tax=Enterococcus faecalis RepID=C7X3F8_... 92 3e-17 UniRef50_A6GCV2 Putative uncharacterized protein n=1 Tax=Plesioc... 92 3e-17 UniRef50_B5I0P9 Putative uncharacterized protein n=1 Tax=Strepto... 92 4e-17 UniRef50_A5DV91 Putative uncharacterized protein n=1 Tax=Loddero... 92 4e-17 UniRef50_Q5BYF2 SJCHGC07422 protein (Fragment) n=1 Tax=Schistoso... 92 5e-17 UniRef50_B5JLQ0 Putative uncharacterized protein n=1 Tax=Verruco... 92 5e-17 UniRef50_Q75EE5 AAR136Wp n=1 Tax=Eremothecium gossypii RepID=Q75... 91 8e-17 UniRef50_Q6CYA8 KLLA0A01848p n=1 Tax=Kluyveromyces lactis RepID=... 91 9e-17 UniRef50_C5IWL2 UV repair DNA polymerase n=21 Tax=Gammaproteobac... 90 1e-16 UniRef50_A7VU61 Putative uncharacterized protein n=1 Tax=Clostri... 90 2e-16 UniRef50_UPI00006CB3A6 hypothetical protein TTHERM_00659050 n=1 ... 89 2e-16 UniRef50_Q4QCF2 DNA polymerase eta, putative n=3 Tax=Leishmania ... 89 3e-16 UniRef50_Q15ZX1 Putative uncharacterized protein n=1 Tax=Pseudoa... 89 4e-16 UniRef50_B6AK40 DNA polymerase eta, putative n=1 Tax=Cryptospori... 89 4e-16 UniRef50_B9WB35 DNA polymerase eta, putative n=3 Tax=Candida Rep... 88 5e-16 UniRef50_C1D2K9 Putative Y-family DNA polymerase n=1 Tax=Deinoco... 88 7e-16 UniRef50_C8Q3E7 Damage inducible protein P (DNA polymerase IV) (... 87 8e-16 UniRef50_B9ZJT1 Putative uncharacterized protein n=1 Tax=Thioalk... 86 2e-15 UniRef50_D2LKG4 DNA-directed DNA polymerase n=1 Tax=Rhodomicrobi... 86 3e-15 UniRef50_A1WXU5 Putative uncharacterized protein n=1 Tax=Halorho... 86 3e-15 UniRef50_A3WNS1 DinP DNA polymerase-like protein n=1 Tax=Idiomar... 86 4e-15 UniRef50_Q56YN7 Putative uncharacterized protein At1g49980 n=1 T... 85 4e-15 UniRef50_A8GJ69 UV protection protein n=1 Tax=Serratia proteamac... 85 5e-15 UniRef50_Q67N70 Putative uncharacterized protein n=1 Tax=Symbiob... 85 6e-15 UniRef50_B6K9Y1 DNA polymerase, putative n=1 Tax=Toxoplasma gond... 84 1e-14 UniRef50_UPI0001913C3A DNA polymerase V subunit UmuC n=1 Tax=Sal... 84 1e-14 UniRef50_B4UDR0 Putative uncharacterized protein n=1 Tax=Anaerom... 83 2e-14 UniRef50_B3L3B7 Putative uncharacterized protein n=1 Tax=Plasmod... 83 2e-14 UniRef50_C8WVC3 DNA repair nucleotidyltransferase/DNA polymerase... 83 2e-14 UniRef50_Q3BNM7 ImpB/MucB/SamB family protein (N-terminal) n=8 T... 82 4e-14 UniRef50_Q4HDP3 Putative uncharacterized protein n=1 Tax=Campylo... 82 5e-14 UniRef50_C2FQ53 UvrA family protein n=1 Tax=Lactobacillus planta... 81 6e-14 UniRef50_A9UX99 Predicted protein n=1 Tax=Monosiga brevicollis R... 81 6e-14 UniRef50_Q2W1Y7 Putative uncharacterized protein n=1 Tax=Magneto... 81 8e-14 UniRef50_C1MYC1 Predicted protein n=1 Tax=Micromonas pusilla CCM... 81 9e-14 UniRef50_A5K6H4 Putative uncharacterized protein n=1 Tax=Plasmod... 80 1e-13 UniRef50_C5NXP3 DNA-damage repair protein n=1 Tax=Gemella haemol... 80 2e-13 UniRef50_Q5CPV1 DinB/family X-type DNA polymerase n=1 Tax=Crypto... 79 2e-13 UniRef50_A4RD58 Putative uncharacterized protein n=1 Tax=Magnapo... 79 3e-13 UniRef50_C9Y1T2 Putative uncharacterized protein n=1 Tax=Cronoba... 79 3e-13 UniRef50_B9Q2G6 DNA polymerase iota, putative n=2 Tax=Toxoplasma... 79 3e-13 UniRef50_A1VWD4 DNA-directed DNA polymerase n=1 Tax=Polaromonas ... 79 3e-13 UniRef50_A1S6R3 Putative uncharacterized protein n=1 Tax=Shewane... 79 3e-13 UniRef50_B5J847 Putative uncharacterized protein n=2 Tax=Octadec... 79 4e-13 UniRef50_B7AU37 Putative uncharacterized protein n=1 Tax=Bactero... 79 4e-13 UniRef50_A3EWL6 Polymerase ATREV1-444 n=1 Tax=Arabidopsis thalia... 79 4e-13 UniRef50_C1AAH6 Putative uncharacterized protein n=1 Tax=Gemmati... 77 1e-12 UniRef50_C6MGZ1 DNA-directed DNA polymerase n=1 Tax=Nitrosomonas... 77 1e-12 UniRef50_A8UAE9 Putative uncharacterized protein n=1 Tax=Carnoba... 77 1e-12 UniRef50_Q4QCF3 DNA polymerase eta, putative n=3 Tax=Leishmania ... 77 1e-12 UniRef50_C2QVF5 DNA-damage repair protein n=1 Tax=Bacillus cereu... 76 2e-12 UniRef50_Q4UFQ5 Putative uncharacterized protein n=2 Tax=Theiler... 76 2e-12 UniRef50_A1WWK8 Putative uncharacterized protein n=1 Tax=Halorho... 76 2e-12 UniRef50_B8C8E2 Predicted protein n=1 Tax=Thalassiosira pseudona... 76 3e-12 UniRef50_Q384F9 Putative uncharacterized protein n=3 Tax=Trypano... 76 3e-12 UniRef50_A7HCF7 Putative uncharacterized protein n=2 Tax=Anaerom... 75 6e-12 UniRef50_A5LXS6 DNA-damage inducible protein P n=2 Tax=Streptoco... 74 1e-11 UniRef50_Q6MQS5 Putative uncharacterized protein n=1 Tax=Bdellov... 73 2e-11 UniRef50_A3WZ00 DNA polymerase IV n=1 Tax=Nitrobacter sp. Nb-311... 72 3e-11 UniRef50_B9L412 Putative uncharacterized protein n=1 Tax=Thermom... 72 4e-11 UniRef50_Q8I347 Putative uncharacterized protein n=1 Tax=Plasmod... 72 5e-11 UniRef50_Q1NNX6 Putative uncharacterized protein n=1 Tax=delta p... 72 5e-11 UniRef50_B5JUJ6 Putative uncharacterized protein n=1 Tax=gamma p... 72 5e-11 UniRef50_Q6F8Z6 Fragment of component of DNA polymerase V (UmuC)... 72 5e-11 UniRef50_A7VEX4 Putative uncharacterized protein n=1 Tax=Clostri... 71 9e-11 UniRef50_Q2Y7D7 DNA polymerase V n=1 Tax=Nitrosospira multiformi... 70 1e-10 UniRef50_C7M0M6 Putative DNA-directed DNA polymerase n=1 Tax=Aci... 70 1e-10 UniRef50_Q4D5H7 Putative uncharacterized protein n=2 Tax=Trypano... 70 2e-10 UniRef50_Q14N04 Putative dna polymerase iv n-terminal and c-term... 70 2e-10 UniRef50_C5T314 UMUC-like DNA-repair protein n=1 Tax=Acidovorax ... 69 3e-10 UniRef50_Q55931 UmuC protein n=1 Tax=Synechocystis sp. PCC 6803 ... 69 3e-10 UniRef50_UPI0001BC9B94 impB/mucB/samB family protein n=1 Tax=Pse... 69 5e-10 UniRef50_A8J5N9 DNA polymerase eta/iota (Fragment) n=1 Tax=Chlam... 69 5e-10 UniRef50_C5GUZ9 DNA polymerase iota n=4 Tax=Ajellomyces RepID=C5... 67 8e-10 UniRef50_Q01QX1 Nucleotidyltransferase/DNA polymerase involved i... 67 9e-10 UniRef50_B5J622 Putative uncharacterized protein n=1 Tax=Octadec... 67 9e-10 UniRef50_A9VZM8 DNA-directed DNA polymerase n=4 Tax=Methylobacte... 67 1e-09 UniRef50_O31841 DNA repair protein homolog yozK n=173 Tax=Bacill... 66 2e-09 UniRef50_UPI00016987CF DNA-directed DNA polymerase n=1 Tax=Endor... 66 2e-09 UniRef50_A7F9S4 Putative uncharacterized protein n=1 Tax=Sclerot... 66 4e-09 UniRef50_C5B9L5 DNA polymerase IV n=1 Tax=Edwardsiella ictaluri ... 65 6e-09 UniRef50_B9DP45 Truncated ImpB/MucB/SamB family protein (Fragmen... 64 8e-09 UniRef50_Q8TS33 Predicted protein n=1 Tax=Methanosarcina acetivo... 64 9e-09 UniRef50_C0BD29 Putative uncharacterized protein n=1 Tax=Coproco... 62 5e-08 UniRef50_C1RL95 Putative uncharacterized protein n=1 Tax=Cellulo... 61 8e-08 UniRef50_UPI0001BC93B4 ultraviolet light resistance protein B, i... 61 8e-08 UniRef50_Q0PGJ8 AIBO80 (Fragment) n=1 Tax=Bos taurus RepID=Q0PGJ... 61 1e-07 UniRef50_D0SUP5 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 59 3e-07 UniRef50_A7MP32 Putative uncharacterized protein n=1 Tax=Cronoba... 59 4e-07 UniRef50_B3T2L8 Putative uncharacterized protein n=1 Tax=uncultu... 57 1e-06 UniRef50_A7MTX6 Putative uncharacterized protein n=3 Tax=Vibrio ... 57 2e-06 UniRef50_Q2IIA1 Putative uncharacterized protein n=1 Tax=Anaerom... 56 2e-06 UniRef50_B8IIJ8 Putative uncharacterized protein n=1 Tax=Methylo... 56 3e-06 UniRef50_D1PMK7 UV-damage repair protein n=1 Tax=Subdoligranulum... 54 7e-06 UniRef50_Q93QE1 Orf5 n=6 Tax=Streptococcus RepID=Q93QE1_STRPN 54 2e-05 UniRef50_C4QSD8 DNA polymerase IV / kappa, putative (Fragment) n... 53 2e-05 UniRef50_A8UAE8 Putative uncharacterized protein n=1 Tax=Carnoba... 52 3e-05 UniRef50_Q6F8Y8 Fragment of component of DNA polymerase V (UmuC)... 50 2e-04 UniRef50_D0AI08 UvrA protein (Fragment) n=3 Tax=Enterococcus fae... 50 2e-04 UniRef50_A9MHU5 Putative uncharacterized protein n=1 Tax=Salmone... 49 4e-04 UniRef50_B0TUJ6 Putative uncharacterized protein n=1 Tax=Shewane... 48 5e-04 UniRef50_A5UTK6 Putative uncharacterized protein n=1 Tax=Roseifl... 47 0.002 Sequences not found previously or not previously below threshold: UniRef50_B8KMW0 Putative aspartate decarboxylase n=2 Tax=gamma p... 119 3e-25 UniRef50_A4AA43 Putative uncharacterized protein n=1 Tax=Congreg... 111 6e-23 UniRef50_C5CKZ3 Putative uncharacterized protein n=1 Tax=Variovo... 84 7e-15 UniRef50_B1XYC2 Putative uncharacterized protein n=1 Tax=Leptoth... 82 3e-14 UniRef50_C4ZK47 Putative uncharacterized protein n=1 Tax=Thauera... 82 3e-14 UniRef50_C7RN50 Putative uncharacterized protein n=1 Tax=Candida... 82 5e-14 UniRef50_C9Y7V7 Putative uncharacterized protein n=1 Tax=Curviba... 81 1e-13 UniRef50_A4BIT4 Putative uncharacterized protein n=1 Tax=Reineke... 80 1e-13 UniRef50_A1KCL6 Putative uncharacterized protein n=1 Tax=Azoarcu... 79 2e-13 UniRef50_Q0A9P1 Putative uncharacterized protein n=1 Tax=Alkalil... 79 3e-13 UniRef50_C6NX90 Putative uncharacterized protein n=1 Tax=Acidith... 77 1e-12 UniRef50_Q21LY8 Putative uncharacterized protein n=1 Tax=Sacchar... 76 2e-12 UniRef50_A6SZA5 Uncharacterized conserved protein n=3 Tax=Oxalob... 75 6e-12 UniRef50_C7I5M5 Putative uncharacterized protein n=1 Tax=Thiomon... 72 3e-11 UniRef50_A1VWD1 Putative uncharacterized protein n=5 Tax=Burkhol... 71 9e-11 UniRef50_C5CQX8 Putative uncharacterized protein n=1 Tax=Variovo... 70 2e-10 UniRef50_Q12AY4 Putative uncharacterized protein n=1 Tax=Polarom... 66 3e-09 UniRef50_B9MJ85 Putative uncharacterized protein n=2 Tax=Comamon... 66 3e-09 UniRef50_C1RL94 Putative uncharacterized protein n=1 Tax=Cellulo... 54 8e-06 UniRef50_A2W7A2 Putative uncharacterized protein n=1 Tax=Burkhol... 54 1e-05 UniRef50_A6GQI5 Putative uncharacterized protein n=1 Tax=Limnoba... 52 3e-05 UniRef50_UPI00016B15B1 hypothetical protein BpseBC_02629 n=8 Tax... 51 9e-05 UniRef50_Q21Z43 Putative uncharacterized protein n=1 Tax=Rhodofe... 50 1e-04 UniRef50_Q5JTF2 Polymerase (DNA directed), eta (Fragment) n=5 Ta... 46 0.002 UniRef50_UPI0000D52C0C Hypothetical Cytosolic Protein n=1 Tax=Ps... 46 0.003 UniRef50_B9K728 Nuclease (RecB family)-like protein n=1 Tax=Ther... 46 0.003 UniRef50_B8IQT5 Putative uncharacterized protein n=1 Tax=Methylo... 45 0.004 UniRef50_Q1CC71 Error-prone repair protein UmuC n=9 Tax=Yersinia... 45 0.004 UniRef50_B8GE44 Putative uncharacterized protein n=1 Tax=Methano... 44 0.008 UniRef50_D1REI8 Putative uncharacterized protein n=1 Tax=Legione... 43 0.019 UniRef50_A7NMG2 Putative uncharacterized protein n=1 Tax=Roseifl... 43 0.024 UniRef50_A4X7V6 Putative uncharacterized protein n=2 Tax=Salinis... 43 0.025 UniRef50_C8WW85 ATP-dependent DNA helicase RecG n=2 Tax=Alicyclo... 42 0.030 UniRef50_B8IBL2 Molybdenum cofactor biosynthesis protein n=2 Tax... 42 0.058 UniRef50_A4YMQ8 Putative uncharacterized protein n=1 Tax=Bradyrh... 42 0.060 UniRef50_C2FQ54 Putative uncharacterized protein n=1 Tax=Lactoba... 41 0.086 >UniRef50_P04152 Protein umuC n=103 Tax=Gammaproteobacteria RepID=UMUC_ECOLI Length = 422 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 422/422 (100%), Positives = 422/422 (100%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD Sbjct: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG Sbjct: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP Sbjct: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF Sbjct: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN Sbjct: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL Sbjct: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR Sbjct: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 Query: 421 VK 422 VK Sbjct: 421 VK 422 >UniRef50_Q5N669 DNA polymerase V n=9 Tax=Bacteria RepID=Q5N669_SYNP6 Length = 418 Score = 364 bits (933), Expect = 5e-99, Method: Composition-based stats. Identities = 193/421 (45%), Positives = 262/421 (62%), Gaps = 10/421 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE VF P L G+PVVVLSNNDGCVIAR+AEAKALG+ MG P+FK KD Sbjct: 1 MFALIDCNNFYVSCERVFDPKLQGQPVVVLSNNDGCVIARSAEAKALGIPMGIPFFKVKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + FSSNY LY DMS RVM TL L P +E+YSIDEAF D +G + G Sbjct: 61 LISQHQIQVFSSNYALYGDMSQRVMQTLATLCPDLEVYSIDEAFLDFSGFQAQ--PLQQG 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + IR TV Q T + V +GIA TK LAK+AN AK+ G V + + + + ++ LP Sbjct: 119 QLIRQTVGQWTGIPVSIGIAATKVLAKVANKLAKQN-----GGVFVLSPSKVQAVLMTLP 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V++VWGI R ++L A+ I T +L T++ +R+ FN+VLER VRELRGE CL LE Sbjct: 174 VEEVWGISSRWGQRLRALNISTAAELQATNLNLMRQQFNIVLERIVRELRGESCLPLESI 233 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +Q ++ SRSFG+ IT P ++QA+ +Y +RAAE+LRS +++ F++T+ F N Sbjct: 234 VNPQQSLVVSRSFGQPITTLPELKQAVATYVSRAAEELRSRQLTTSYLTVFVRTNRFQEN 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 Y +AS LLTPT + ++ A R ++++Q G Y+KAGV+ S Q +L Sbjct: 294 --YEAPNASQGLLTPTNHTGKLLEIALRCTESLYQPGRAYKKAGVLFQGLGSAQSIQQSL 351 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F+++ LM MD LN + GR +L++ G +Q W M+ SP+YTTR DL Sbjct: 352 FEESDS-EKGAALMVTMDRLNRRYGRQSLHYGATGTRQPWAMRSDQRSPQYTTRWQDLPE 410 Query: 421 V 421 V Sbjct: 411 V 411 >UniRef50_A4SWQ9 DNA-directed DNA polymerase n=13 Tax=cellular organisms RepID=A4SWQ9_POLSQ Length = 450 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 189/424 (44%), Positives = 270/424 (63%), Gaps = 4/424 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 FAL DVN FY SCE VF+P L P+VVLSNNDGC +AR+AE KALG+K G PWF+ ++L Sbjct: 28 FALVDVNNFYVSCERVFQPKLEDVPMVVLSNNDGCAVARSAEVKALGIKTGTPWFQMQEL 87 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL-TGVRNCRDLTDFG 120 ++ G+ +SSNY LY DMS+RV+ L +P +E+YSIDE+F + T ++ +D + G Sbjct: 88 AKKHGIQAYSSNYTLYGDMSSRVVEVLRAFTPNLEVYSIDESFLQIETVLKQYQDTVELG 147 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMSA 178 R ++ V T L V VGI +KTLAK ANH AKK Q+ GV D++ E + MS Sbjct: 148 RSMKEKVRDTTGLPVCVGIGASKTLAKFANHLAKKHQQF-AGVCDVNAMPKEEFYQWMSE 206 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 V +VWGIGR+++KKL A I +V DL + +R+ + VV+ER ELRG CL+LE Sbjct: 207 TSVAEVWGIGRQLAKKLKAQNIHSVFDLLQASPQAMRQQYGVVMERLCYELRGVSCLKLE 266 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E AP KQ+II SRSFG+ +T + +++ +AARAAEKLRS++ ++ FI+T+PF Sbjct: 267 EVAPAKQQIIASRSFGKLVTKLEELAESVAMHAARAAEKLRSQNGTTGALTVFIQTNPFK 326 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 NEP + S ++ L P+ ++ + NAA + L I+Q+G RY+KAGV+L + AQ Sbjct: 327 QNEPQHHQSITIPLSDPSDNTLTLTNAALKGLKQIYQSGFRYKKAGVILNLISDKPTAQQ 386 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 +LF+D + S LM +D +N++ G + A G +Q+WQM+ SP YTTR +L Sbjct: 387 SLFEDIETKGKSAHLMKAVDEINSRFGNAAIRSAAMGTKQEWQMRSGNRSPNYTTRWDEL 446 Query: 419 LRVK 422 + Sbjct: 447 PVAR 450 >UniRef50_A1U8F5 DNA-directed DNA polymerase n=6 Tax=Gammaproteobacteria RepID=A1U8F5_MARAV Length = 430 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 210/423 (49%), Positives = 284/423 (67%), Gaps = 4/423 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FALCD+N+FYASCE +F P G+PVVV SNNDGC +AR+ EAKALG+KMG P F+ ++ Sbjct: 8 VFALCDMNSFYASCEQLFNPAFRGRPVVVASNNDGCAVARSPEAKALGIKMGQPIFELRE 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + G++ SSNY LY DMS+R M L E +PRV YSIDEAF DLTG+ + DFG Sbjct: 68 YVEKHGLIVCSSNYALYGDMSHRFMLALAECAPRVMPYSIDEAFLDLTGIDSVVSYLDFG 127 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++ V T L + VGIA + TLAKLANHAAK + GVVDL++ +RQR+LM P Sbjct: 128 HHVKELVRIWTGLPICVGIAPSPTLAKLANHAAKHYPATR-GVVDLTDRDRQRRLMHLTP 186 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL-QLEE 239 V++VWGIGR++SK+LDA+GIKT LDLAD+D ++IR HF+VV+ERTVREL G PC L E Sbjct: 187 VEEVWGIGRKLSKRLDALGIKTALDLADSDPKWIRDHFSVVVERTVRELNGIPCHSDLLE 246 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 AP KQ+I+CS+SFG +TD SM AI ++A+RA+EKLR E++ C +++ F+ TS F Sbjct: 247 VAPAKQQILCSKSFGAPVTDLNSMLAAITAHASRASEKLRRENRDCGYLAAFMSTSRFRT 306 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 +Y N + L PT D+R+I+ A ++W+ G+RY KAG++L DF G Q + Sbjct: 307 -GSHYANQQGITLPFPTSDTREIVRHAVSIARSLWREGYRYNKAGIVLTDFRVPGACQSD 365 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ-GIQQQWQMKRAMLSPRYTTRSSDL 418 F + +LM +D +N+ G+ T+ F Q Q WQM+R LSP YTTR +D+ Sbjct: 366 FFSQVEDDERNRKLMRTLDKINSIAGKNTIQFGRQIHKNQSWQMRRENLSPAYTTRWADI 425 Query: 419 LRV 421 Sbjct: 426 PVA 428 >UniRef50_A0L9G4 DNA-directed DNA polymerase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9G4_MAGSM Length = 421 Score = 354 bits (908), Expect = 3e-96, Method: Composition-based stats. Identities = 197/421 (46%), Positives = 259/421 (61%), Gaps = 3/421 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 +AL D N FYASCE +F+P L GKPVVVLSNNDGC IAR+ EAK LG+ MG P + + L Sbjct: 3 YALVDCNNFYASCERLFQPHLEGKPVVVLSNNDGCAIARSNEAKQLGIAMGAPLHQIQAL 62 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 ++ V FSSNY LY D+S RVM TLE+L+PRVEIYSIDEAF DL G+ + GR Sbjct: 63 IKQHQVALFSSNYPLYGDLSARVMRTLEQLAPRVEIYSIDEAFLDLQGMPAPQR-QILGR 121 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 I V + T + V VGI TKTLAK+AN AKK + GV+DLS+ + RK + LPV Sbjct: 122 TIHQQVKRWTGIPVSVGIGPTKTLAKVANRFAKKSPKT-EGVLDLSDPQWCRKALHQLPV 180 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +VWG+G R +K+L+ GI T L L+ R+ FNVVLERTVRELRGE + Sbjct: 181 GEVWGVGPRWAKRLNQAGIDTALQLSRMPPPLARQQFNVVLERTVRELRGESVIPFAALP 240 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 +Q I +R+FG++I + +++AI S+ RAAEKLR + + FI T+ F+ + Sbjct: 241 AARQSIATTRTFGQKIHTHDEIKEAISSFTVRAAEKLRKQGLLAAALHLFITTNRFSEQD 300 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 Y NS + P D+ ++ A +LDAI++ G+RYQKAGV+L S Q +LF Sbjct: 301 LQYKNSLTWSFQQPQDDTLTLLTGAHAALDAIYRPGYRYQKAGVILLGLVSAQHFQPSLF 360 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG-IQQQWQMKRAMLSPRYTTRSSDLLR 420 P S LM +D LN K GRGT+ F +G + W M++ SP YTTR SDL + Sbjct: 361 APPPRLPNSRALMRTLDGLNQKMGRGTVRFGAEGPPKPSWGMRQLQRSPAYTTRWSDLPQ 420 Query: 421 V 421 V Sbjct: 421 V 421 >UniRef50_Q11V03 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=5 Tax=Bacteroidetes RepID=Q11V03_CYTH3 Length = 420 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 174/422 (41%), Positives = 248/422 (58%), Gaps = 2/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL D N FYASCE VF P L GKP+VVLSNNDGCVIAR+ EAKALG+ MG +F ++ Sbjct: 1 MYALIDCNNFYASCERVFNPSLNGKPIVVLSNNDGCVIARSNEAKALGIDMGGAYFMIEE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 ++ V FSSNY LY DMS RVM+TL E +P +E+YSIDE+F + G DL +G Sbjct: 61 ALKKHNVFVFSSNYTLYGDMSQRVMNTLAEFTPEIEVYSIDESFLNFEGFELLGDLKIYG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR TV + T + V +GIA TK LAKL+N AKK + V L + E+ + Sbjct: 121 TTIRNTVFRNTGIPVSIGIAPTKALAKLSNRIAKKNKEYNH-VCVLDSQEKIMAALKITT 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 VD++WGIGR L GI+T D ++RK+ +VV R +EL+GE CL+LE Sbjct: 180 VDNIWGIGRAYHNFLLNHGIQTTYDFVQQPEEWVRKNMSVVGLRLHKELKGEKCLELELV 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A KQ I SRSFG +TD +++A+ ++A+R A KLR + C + + T+ + Sbjct: 240 AMAKQNICTSRSFGRYLTDIDPIKEAMSNFASRCALKLRKDKSVCTLVQILLHTNKHKPD 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 +P Y + + L PT + ++I A+ R+LD +++ G+RY K GV++ + Q NL Sbjct: 300 QPQYFVNKVITLPVPTNSTIELIQASLRALDLVYKPGYRYMKCGVIVSGIVPEDRVQQNL 359 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 FD R ++ T+MD LN G + G+ +QW +K LS Y+TR +++ Sbjct: 360 FDTVD-RSKHNKVTTIMDKLNKSLGADFVKVGSLGVTKQWHLKAEKLSQCYSTRWDEIIV 418 Query: 421 VK 422 +K Sbjct: 419 IK 420 >UniRef50_B0VH44 Protein umuC n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH44_9BACT Length = 429 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 192/422 (45%), Positives = 257/422 (60%), Gaps = 3/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D N FY SCE VF P L KPV VLSNNDGC+++R+ E K L + MG P FK + Sbjct: 11 IVALVDCNNFYVSCERVFNPKLNNKPVAVLSNNDGCIVSRSQEIKDLKIPMGAPGFKYEG 70 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ G SSNY LYADMS+RVM L SP VEIYSIDEAF L G +N RDL +FG Sbjct: 71 LIKKHGGTLLSSNYALYADMSSRVMEVLALFSPEVEIYSIDEAFLGLNGFKN-RDLENFG 129 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++I+ TV Q T + V VGI+QTKTLAK+ANH AK++ G + L + ER K ++ P Sbjct: 130 KKIKRTVFQWTGIPVSVGISQTKTLAKVANHFAKRYSAFQ-GSLCLLDDERITKALAKTP 188 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWGIGR+ K L I+T L L D + +FI + V +TV ELRG C+ L+E Sbjct: 189 VSEVWGIGRQYDKFLRQHKIETALQLRDAEDKFIEHYLTSVGLKTVLELRGYACIDLDEA 248 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I+ SRSFG++++ +++AI Y RAAEKLR + + F+ T+ F Sbjct: 249 PANKKSIVTSRSFGKQVSSLNDLQEAISEYVTRAAEKLRKQKSVAGLLMVFLSTNRFKE- 307 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y NS S L PT + ++I A LD ++ G ++KAGVML D + L+ Sbjct: 308 GPQYNNSLSTTLFPPTAYTPELIKTALNLLDDLYLPGFEFKKAGVMLADIIPEKDVPLSF 367 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 D N ++LM MD LN G+ TL++A GI++ W+MKRA LSP YTT +DL + Sbjct: 368 MDTNYLDDKRKKLMEAMDKLNRTYGQDTLFYASSGIKKDWKMKRAKLSPHYTTHWNDLPK 427 Query: 421 VK 422 VK Sbjct: 428 VK 429 >UniRef50_B8FBE8 DNA polymerase IV n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=DPO4_DESAA Length = 396 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 97/400 (24%), Positives = 164/400 (41%), Gaps = 18/400 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AFYAS E + P+L G+ V+V +N G V + + EA+ALGV+ P + Sbjct: 5 LIIHVDMDAFYASVELLDNPELRGQCVIVGGASNRGVVCSASYEARALGVRSAMPIVTAR 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L R V Y ++S +V + +P VE S+DEAF D+T + Sbjct: 65 KLCPRG--VFLPVRRARYQEISRKVFEIFHQYTPLVEPISLDEAFMDVTSSTRLFGSGEE 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 IR + +T GIA+ K +AK+A+ K + + ++ ++ + Sbjct: 123 IAANIRRQIESSLGITASAGIAKNKLVAKIASDLCKPNG------LLVVPADQTQEFLDP 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ +WG+G KL ++G+KT+ D+ + +F E RG +E Sbjct: 177 LPISRLWGVGPASRNKLISLGVKTIRDVRKLTQEMLSANFGRNGEVIYAFARGMDDRPVE 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I +F + + + + R A ++R E R ++ +K + F Sbjct: 237 PPG-AAKSIGREITFDRNVYTLEEAYKWMLFLSERVARRMRKEEATGRTVNIKVKYADF- 294 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-FSQGVAQ 357 + SV L +PT D +I A + L + GV L Q Sbjct: 295 -----IQVTRSVTLESPTDDPGEIYTHAKKLLQKTLVGSKAVRLLGVTLSQLVTPGQAWQ 349 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 LFDD +L +D + + G GT+ A Sbjct: 350 PGLFDDPTASERKRKLNQALDGIWDRFGSGTVEPAALVTD 389 >UniRef50_D2QVG5 DNA-directed DNA polymerase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVG5_9SPHI Length = 422 Score = 345 bits (884), Expect = 2e-93, Method: Composition-based stats. Identities = 174/423 (41%), Positives = 247/423 (58%), Gaps = 3/423 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M AL D N FY SCE F P L G+PVVVLSNNDG ++AR+ E K L V MG P+F+ + Sbjct: 1 MIALADCNNFYVSCERSFNPSLNGQPVVVLSNNDGSIVARSNEVKKLNVGMGQPFFEIER 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDF 119 L + G+ FSSNY LY MS RVM+ VE+YSIDEAF DL G + DLT F Sbjct: 61 LRQEHGIHVFSSNYVLYGSMSARVMAIFGRFVEDVEVYSIDEAFFDLNGYESIYPDLTTF 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +R+TV+Q T + + +GIA TKTLAK+AN AK Q GV LS E+ R+ + L Sbjct: 121 AHNLRSTVMQWTRIPISIGIAPTKTLAKVANWYAK-RQPDASGVCMLSTPEQIRQALEQL 179 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 VD++WGIGRR + L GIKT L+ + +++KHF + R V ELRGE C +E Sbjct: 180 SVDELWGIGRRYASFLKQNGIKTALEFSQCHDVWVQKHFTINGLRLVYELRGEVCRTVET 239 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + + SFGE + D P++ +A+ +Y ARA+EKLR + ++ F+ T+ F Sbjct: 240 QPSARKSVCVAPSFGELVGDRPTLYEALTNYVARASEKLRKQRLAAGAMTVFLHTNRFRA 299 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 Y NS S L PT ++ + A ++LD+I+++G+ YQK G++L + Sbjct: 300 AVGQYSNSRSFTLPVPTNLIPELSHYAIKALDSIYKSGYAYQKVGLILSALQPDTHQTPD 359 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 +F + P +L+ ++ LN+K GR + FA QG W+MK+ LSP YTT D++ Sbjct: 360 VF-EGELDPRLLKLLPTVERLNSKLGRDKVRFAAQGFNHLWKMKQRWLSPCYTTHWKDII 418 Query: 420 RVK 422 K Sbjct: 419 ITK 421 >UniRef50_B7JBK8 UmuC protein n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7JBK8_ACIF2 Length = 427 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 203/423 (47%), Positives = 258/423 (60%), Gaps = 4/423 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FY SCE VFRPDL G+PVVVLSNNDGCV+AR+AE KALGV MG PWF+ + L Sbjct: 3 IALVDANNFYVSCERVFRPDLEGRPVVVLSNNDGCVVARSAEVKALGVAMGTPWFQLQKL 62 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 RR G++ SSNY LYADMSNR+M L SP E+YSIDE F DL+G R L+ G+ Sbjct: 63 ARREGIIALSSNYSLYADMSNRMMGILSTFSPIQEVYSIDECFLDLSGFAQDR-LSQLGQ 121 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG-GVVDLSNLERQRKLMSALP 180 R V Q L VGVGIA TKTLAKLANH AKK G V D QR L+ LP Sbjct: 122 AARQRVRQWVGLPVGVGIAATKTLAKLANHVAKKRPEYAGVCVWDDLPEGDQRHLLQQLP 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWG+GR+ + +L GI+TV DL D +RK F++++ER++RELRGEPC+ + E Sbjct: 182 VSEVWGVGRQWTTRLQETGIQTVWDLRQADPALMRKRFSILMERSIRELRGEPCIAMVEI 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P +QEI SRSFG +T + +AI Y RA KLR + + FI TSPF Sbjct: 242 PPPRQEIQSSRSFGRPVTSAEELGEAISLYTVRAVYKLRRQGSVAGALRVFIHTSPFQAR 301 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y + +V L P+QD+R + A +L ++++G Y KAGV L + S Q +L Sbjct: 302 LPSYHATRTVALNRPSQDTRVFLQAGRIALADMYRSGFAYAKAGVHLLEITSADALQADL 361 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ--WQMKRAMLSPRYTTRSSDL 418 F + +LMT +D +NA+ G GTL G+Q+ W MKR SP YTTR ++L Sbjct: 362 FLSAEEEARAHRLMTTLDRVNARFGTGTLQPGVAGLQEPRGWAMKRGNKSPAYTTRWAEL 421 Query: 419 LRV 421 R Sbjct: 422 ARA 424 >UniRef50_C0GDP3 DNA-directed DNA polymerase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDP3_9FIRM Length = 395 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 97/408 (23%), Positives = 176/408 (43%), Gaps = 22/408 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D+NAF+ASC P GKP++V + G ++ + EA+ GVK ++ Sbjct: 4 IIHVDMNAFFASCHQAQNPQWQGKPLLVAGDPQKRHGIILTASYEARKFGVKTAMAVWQA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-T 117 K L + + S +++LY+ S R+M+ +E+ +P VE +SIDEA+ D+TG Sbjct: 64 KKLCPQG--IYISPDHKLYSAYSKRIMAIMEDYTPLVEPFSIDEAWLDVTGSARLFGTTE 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + GR ++ +L T + VGI+ K LAK+A+ K + +++ Sbjct: 122 EIGRLLQQRILDETGIPCSVGISGNKFLAKMASERQKPQG------FTILWPRDVPEVLW 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV+++ G+GR+++ L MGI+T+ +LA +R + F V E G + Sbjct: 176 PLPVEEMVGVGRKMAPALHEMGIETIGELAAMPLRLLVSRFGVAGESLHHLANGRDDSPV 235 Query: 238 EE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + T + + S + I D + + + + + +LR R ++ +K Sbjct: 236 DPTVFDTVKSVGNSLTLPRDINDPEDVARVLLKLSEKVGRRLRQSGNVARTVTLTVKDQN 295 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-V 355 F + S L PT + I A ++ + + GV + + Sbjct: 296 F------VSVTRSRTLHEPTGFTDVIYKTAVDIHQKQFEPWRKVRLLGVSVSNLLPADGG 349 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 QL+LF + E L V D + + G + A +++ K Sbjct: 350 VQLSLFGASE--ERMENLTRVTDRIRDRYGDTVIGRARLCKEKETPPK 395 >UniRef50_Q0VP68 DNA-damage-inducible protein n=4 Tax=Proteobacteria RepID=Q0VP68_ALCBS Length = 428 Score = 340 bits (872), Expect = 5e-92, Method: Composition-based stats. Identities = 205/431 (47%), Positives = 275/431 (63%), Gaps = 12/431 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N+FYA+CE +FRPDL G+PVVVLSNNDGC++A +AEAKALGVK G P F+ D Sbjct: 1 MFALVDCNSFYAACERLFRPDLQGRPVVVLSNNDGCIVAGSAEAKALGVKTGMPLFQAHD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L R V FSSNY LY D+S RVM+TLE L+PRVE YSIDEAF D++ + +L Sbjct: 61 LIRGHKVAVFSSNYALYGDISQRVMATLETLAPRVEAYSIDEAFLDVS-LMKTAELQPLA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +IRA + + + V VG+A TK LAKLANHAAK++ GGVV LS+ R+ KL+S P Sbjct: 120 LQIRARIDRWVGVPVCVGVAPTKVLAKLANHAAKRYPAT-GGVVVLSDPLRRDKLLSLTP 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + VWG+GRR+ + +A+GI T LDLA D+ IR+ F+VV ER VREL GEPCL L+ Sbjct: 179 ISQVWGVGRRLRGRFEALGINTALDLARADVGMIRQRFSVVQERLVRELNGEPCLSLDTQ 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +Q++I SRSFGE + P +RQA+ + +RA E LR E Y ++ +++T+P Sbjct: 239 PSPRQQVIYSRSFGEPVAALPPLRQALSDFVSRAMESLRKEGLYAGRVTVYLRTAPMGKP 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + + ++ S L T D+R ++ A L +W G+RY KAGV+L D + Q L Sbjct: 299 QQLFPDTLSAVLSPATADTRLVVRQAQALLAQLWWPGYRYGKAGVILTDLRGRDQVQCGL 358 Query: 361 FDDNAPRPGS-----EQLMTVMDTLNAKEGRGTLYFAGQGIQQQ----WQMKRAMLSPRY 411 F + P E LM VMD++N G G ++ AG+G+Q W M+RA LSP Y Sbjct: 359 FAEQKPAEQETGRRGEALMAVMDSINQS-GVGKVWLAGRGMQGNQHSTWAMRRAHLSPAY 417 Query: 412 TTRSSDLLRVK 422 T+R SDL V+ Sbjct: 418 TSRWSDLPVVR 428 >UniRef50_A1BFA1 DNA-directed DNA polymerase n=7 Tax=Chlorobiaceae RepID=A1BFA1_CHLPD Length = 426 Score = 338 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 174/427 (40%), Positives = 247/427 (57%), Gaps = 9/427 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE VF P L +PVVVLSNNDGC IAR+ EAKA+G+ MGDP +K ++ Sbjct: 1 MFALVDCNNFYVSCERVFNPGLQNRPVVVLSNNDGCFIARSEEAKAIGLAMGDPAYKNRE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L R+ V +S+N+ LY DMS RVM TLE L+P +EIYSIDE F DL G +L D+ Sbjct: 61 LLRQHNVAVYSANFPLYGDMSARVMKTLETLAPDLEIYSIDECFLDLGGFGKF-NLADYA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R TV + T + V +GI TKT+AK AN AKK GGV LS R+ + A+ Sbjct: 120 AATRKTVHRNTGIPVSIGIGATKTIAKAANRMAKKN-LSLGGVCILSTAAATREALGAMA 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ +WGIG + + L I T LD AD +++KH ++ R +EL G CL LE Sbjct: 179 VEHIWGIGSQYAALLHKQHIHTALDFADAPTHWVQKHLHITGARVQQELNGHSCLPLELV 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 KQ I SRSFG ++ Y + AI + + A KLR E ++ F+ TSPF Sbjct: 239 RSRKQSICTSRSFGSLVSSYEEIGYAIAHFTSTCAFKLRREGSRASLLTVFLYTSPFIEK 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA---Q 357 E Y + + L P+ ++ ++ AA L +I+++G+ Y+KAGV++ + A Sbjct: 299 ENRYRGTRTFALPFPSNNTLELQKAAQLLLASIYRSGYGYKKAGVLVSGITDEKGAAMTT 358 Query: 358 LNLFDDNAPRPGSE---QLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 L+LFD++ + +LM +D +N++ G+GTL A W+ ++ LSP YTTR Sbjct: 359 LSLFDNDPLPRNQKRDMKLMETLDAINSRFGQGTLRTASD-TNSGWKQRQEKLSPHYTTR 417 Query: 415 SSDLLRV 421 +D++ + Sbjct: 418 WNDIIEI 424 >UniRef50_Q3ABL2 DNA polymerase IV n=4 Tax=Firmicutes RepID=DPO4_CARHZ Length = 391 Score = 338 bits (866), Expect = 3e-91, Method: Composition-based stats. Identities = 99/400 (24%), Positives = 167/400 (41%), Gaps = 22/400 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AF+A+ E P+L GKPV+V G V A + EA+ GV+ ++ Sbjct: 5 VIIHVDMDAFFAAVEQRDNPELKGKPVIVGGVPGERGVVAAASYEARKFGVRSAMSLWEA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-T 117 L + N++ Y ++S ++ E +P VE S+DEA+ D+TG + Sbjct: 65 ARLCPHG--IFIPGNHKKYQEVSEKIFRIFREYTPLVEPVSLDEAYLDVTGSQKLFGPGA 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + G++I+ + + T LT VG+A K LAKLA+ K + ++ Sbjct: 123 EIGKKIKKRIFEETELTASVGVAPNKFLAKLASEVNKPDGFCE------VREDNVLDFLA 176 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV+ +WG+G ++ ++L+ MGIKTV D + F+RK F V+ + RG ++ Sbjct: 177 PLPVEMLWGVGEKMKERLNDMGIKTVQDFWELPEFFLRKKFGVLGQNLYYLSRGIDFREV 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + + + +D + + LR E Y IS I+ S F Sbjct: 237 IPERVP-KSLGKEITLQKDSSDVDYLLGKLLGLTMAVGRGLRREGFYAGGISVKIRLSSF 295 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ-GVA 356 + + PT + A R + + GV G Sbjct: 296 ------ITYTRHSRFFEPTWMDDVLYREAKRLFLENYHGELPVRLVGVTATPLVPVGGGR 349 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 Q++LF + E L ++D LN K G T+ A Sbjct: 350 QISLFGE---DLRRENLYPIIDRLNHKYGNKTVTRAKILK 386 >UniRef50_A6ET82 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=4 Tax=Bacteroidetes RepID=A6ET82_9BACT Length = 421 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 178/424 (41%), Positives = 258/424 (60%), Gaps = 5/424 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKAL-GVKMGDPWFKQK 59 M AL D N+FYASCE VFRPDLWGKPVVVLSNNDGC+IA N EAKAL + M +P FK K Sbjct: 1 MIALVDCNSFYASCEQVFRPDLWGKPVVVLSNNDGCIIAANREAKALTDIAMFEPVFKIK 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 V FSSNY LY ++S RVM+TL SPRVE+YSIDE+F DL G + +L + Sbjct: 61 KQLIAHNVTLFSSNYTLYGELSQRVMNTLYLFSPRVEVYSIDESFVDLHGFGHK-NLKHY 119 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G I+ T+ + T + GVGIA TK LAKLAN AKK + V + + ++ +++ Sbjct: 120 GNFIKETIFRNTGIPTGVGIAPTKVLAKLANKIAKK-GPEHDHVFVIDSDAKRIEILKTT 178 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + +WGIGR+ +KKL +GI T + + ++RK VV ER RELRGEPC+ + E Sbjct: 179 EIKSIWGIGRQQTKKLKEVGIHTAYQFTEMPLAWVRKEMTVVGERLWRELRGEPCMDMIE 238 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 K+ I ++SFG ++ + +A Y + AE LR++ ++ F+ TS F++ Sbjct: 239 IPKPKKGIGTAKSFGRKLERLDLIEEACAYYISEVAEVLRAQKSCAMYLQVFLNTSSFSV 298 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 N+ Y N +V L PT ++ ++ A + L AI++ G+RY+K GV L + Q N Sbjct: 299 NDKQYRNKQTVTLAIPTNNTFTLVTEARKILKAIYKPGYRYKKVGVNLTGIIPEAYVQGN 358 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ-QQWQMKRAMLSPRYTTRSSDL 418 LF ++ ++LM + DTLN K G+G ++ G + ++W++ +A SPR+TT+ S++ Sbjct: 359 LF-ESPKTEKHKELMQLFDTLNYKYGKGKVFSGLTGTRMKEWELVKADRSPRFTTQWSEI 417 Query: 419 LRVK 422 L VK Sbjct: 418 LEVK 421 >UniRef50_Q48B37 RulB protein n=30 Tax=Pseudomonas RepID=Q48B37_PSE14 Length = 427 Score = 337 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 202/422 (47%), Positives = 273/422 (64%), Gaps = 4/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +F L D N+FYASCE VFRPDL P+VVLSNNDGCVIAR+ +AK VKMG P+F+ KD Sbjct: 8 VFGLVDCNSFYASCERVFRPDLAKVPIVVLSNNDGCVIARSYDAKPY-VKMGAPYFQIKD 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + RR G+ FSSN+ LY D+S RVM+ +E + P VE+YSIDEAF DL+G+ +LT+ G Sbjct: 67 VLRRHGIQSFSSNFALYGDLSQRVMAIIESMVPAVEVYSIDEAFADLSGMP--GNLTELG 124 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R IR+ V + T + VGVGIA TKTLAKLANH AK+ Q TGGVVD+ + ++ ++ Sbjct: 125 RSIRSKVYRCTGIPVGVGIAPTKTLAKLANHTAKRLQAHTGGVVDICDPVKRDWVLRNTS 184 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWGIGR++ L+ M I + DLA D +RK F+VV+E+T REL G CL+L+E Sbjct: 185 VGEVWGIGRKMKAHLEGMQILSAKDLAMADPWMLRKTFSVVIEKTARELAGTACLELDEV 244 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P +QEI CSR FG+R+T+ +++A+ +Y RA+EKLR++ C+ I I+T F + Sbjct: 245 EPPRQEICCSRMFGKRLTELGPIKEAVATYMMRASEKLRAQGSVCKKIRVSIRTGMFNPD 304 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E Y N A V+L PT D R + AT ++ I++ G RY KA V+L D G +L Sbjct: 305 EAKYANGALVQLPYPTNDVRLMTQYATEAVSRIFRPGFRYSKAEVLLMDICQPGEFTDDL 364 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F N P S++LM +D++N K GRGTL + W M+R +S YTTR L Sbjct: 365 FAVNQPVS-SDRLMAALDSINGKWGRGTLRTGSVPVTPDWGMRREQMSQSYTTRLDQLWV 423 Query: 421 VK 422 VK Sbjct: 424 VK 425 >UniRef50_Q0AX85 DNA-directed DNA polymerase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AX85_SYNWW Length = 393 Score = 336 bits (862), Expect = 9e-91, Method: Composition-based stats. Identities = 100/401 (24%), Positives = 163/401 (40%), Gaps = 19/401 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 CD++AF+AS E + P L GKPVVV + + G V + EA+ G++ P + Sbjct: 7 ILHCDLDAFFASVEQLDNPSLRGKPVVVGGSMHSRGVVSTCSYEARKFGIRSAMPIAQAY 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + V N Y ++S +V S L SP EI SIDEAF D++G + Sbjct: 67 RLCPQA--VFLPVNMPRYLEISKQVFSILSRYSPIKEIISIDEAFLDISGCSSLYGSPEK 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 G I V LT+ VGI+ K LAKLA+ K + + +L+ Sbjct: 125 IGCLINEQVYSELGLTISVGISYNKFLAKLASDMDKPNG------LRIITESEALELLRP 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV +WGIG++ + LD +GIKT+ D+ D+ ++ G +E Sbjct: 179 LPVSRIWGIGQKTEQSLDKLGIKTIGDIQDSPPEWLEDKIGSAGRLFWELAHGIDRRAVE 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F E I D + + I +AA KLR E + I+ ++ S F Sbjct: 239 PEH-ERKSLGREETFPEDINDTAYLEKLIVQFAAELCRKLRQEALFAATITIKLRYSNF- 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S + P + A+ L + + G+ LG + Sbjct: 297 -----KTITRSKTIN-PCNSDIIVTQIASELLHHSYNNKQPLRLFGLSLGQLSPAASLEQ 350 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + + + +MD + + G G + A + Sbjct: 351 GSLFEPQSNADYKSIDRLMDEIRDRFGPGAIKRANLLPNKD 391 >UniRef50_Q2W5K5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=6 Tax=Proteobacteria RepID=Q2W5K5_MAGSA Length = 425 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 171/423 (40%), Positives = 237/423 (56%), Gaps = 2/423 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D N FY SCE F P L GKPV+V+SNNDGC +AR+AEAKA+GV MG+P FK + Sbjct: 3 VYALVDCNNFYVSCERAFNPALEGKPVIVMSNNDGCAVARSAEAKAIGVGMGEPAFKLRH 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L G++ SSNY LY DMS RVMS L SP EIYSIDE F DL G+ +LT + Sbjct: 63 LVDSHGLIMLSSNYALYGDMSERVMSVLATFSPGAEIYSIDECFLDLDGMPVD-NLTAWS 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +++RATV + T + V VGI TKTLAKLAN AKK ++ G + + + P Sbjct: 122 QQVRATVRRWTGIPVSVGIGTTKTLAKLANRLAKKSKKANGVLDLSRDARWIEAALKQTP 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V DVWGIGR+ + GI+T DL +I+K V RTV ELRG P L+ Sbjct: 182 VGDVWGIGRQYAALCGVNGIRTAFDLTLQPDGWIKKTMGAVGLRTVMELRGTPVHTLDTA 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K CSRSFG +T++ + A+ ++A+RAAEK+R E + F T F + Sbjct: 242 PSDKHTTCCSRSFGASVTEFEQVHDAVMTFASRAAEKIRGEGLVSGAVQVFAYTDRFRPD 301 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 +P + ++ ++L PT + II AA + L + W+ G+ Y+KAGV++ D +L Sbjct: 302 QPQFSLNSMIRLSPPTSSTPHIIGAALKGLKSAWRDGYEYKKAGVIMLDLVRPEDIPRDL 361 Query: 361 F-DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 F LM +D +N K G+G + F W+M+ + +P +TT D+ Sbjct: 362 FSPPPESGARPTALMAAVDGINGKMGKGAVGFGLVPDDAPWKMRCSNRTPSFTTSWDDIP 421 Query: 420 RVK 422 VK Sbjct: 422 VVK 424 >UniRef50_B8CWI6 DNA-directed DNA polymerase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWI6_HALOH Length = 385 Score = 335 bits (860), Expect = 1e-90, Method: Composition-based stats. Identities = 84/399 (21%), Positives = 158/399 (39%), Gaps = 22/399 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFKQ 58 D++AF+AS E + P+ KPV+V N G V + EA+ GVK + Sbjct: 5 IMHVDMDAFFASVEQLDNPEFRRKPVIVGGIDLENRGVVSTASYEARKYGVKSAMSVVEA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT- 117 + L + + Y ++S ++ +P VE SIDEAF DLTG + Sbjct: 65 RRLCPEG--IFVKGRHSRYREISEKIFRIFNTYTPLVEKVSIDEAFLDLTGCHRLFGSSV 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + G++I+ + ++ LT +G++ K LAKLA+ K + + K+++ Sbjct: 123 EIGKKIKNKIKEQLGLTASIGLSYNKFLAKLASGMDKPDG------FFIIDDNNVDKILN 176 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V +VWGIG++ + L + GIKTV L ++ + RG + Sbjct: 177 KLCVGEVWGIGKKTEQLLLSKGIKTVGMLRHLSKSDLKGILGKQGLQLYYLARGIDDRHV 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E + + I +F + + D + + + + R A +LR + ++ + Sbjct: 237 EPGSDI-KSISHEETFSDDLIDPDEVMSHLMNMSERVARRLRKNCLKGSTVFIKVRYNN- 294 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + + D+ I + + G+ + + Q Sbjct: 295 -----RVTLTRRTTIKEYVDDTDSIYRTGLLLIKKHNLLSKPIRLLGIGMANLTDNNGIQ 349 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 L+LF D R ++L + +D + + G ++ Sbjct: 350 LSLFTD---RVRKKRLTSTIDKIKDRYGEKSITRGRNLT 385 >UniRef50_C3X802 DNA-directed DNA polymerase n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X802_OXAFO Length = 420 Score = 334 bits (857), Expect = 3e-90, Method: Composition-based stats. Identities = 174/418 (41%), Positives = 257/418 (61%), Gaps = 9/418 (2%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N F+ SCE VFRPDL GKPV+VLS+NDGC IAR+ EAKALG++MG+PWFK KDL Sbjct: 6 ALVDCNNFFVSCERVFRPDLEGKPVIVLSSNDGCAIARSNEAKALGIRMGEPWFKVKDLP 65 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 + VV FSSN+ LY+D+SNRV L + SP E+YS+DE+F DLTG D+ + Sbjct: 66 KYRDVVVFSSNFPLYSDLSNRVKYLLADFSPVQEVYSVDESFLDLTG---FDDVKERMVA 122 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV-DLSNLERQRKLMSALPV 181 IR TV +R + V VG+ TKTLAKLAN+ AKK R G ++ +++ L+ +P+ Sbjct: 123 IRETVAKRIGIPVCVGVGPTKTLAKLANYVAKKHPRSKGVFHYNVLTEQQKSGLLKQIPI 182 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 D+VWG+GRR+++ L + GI+TV L + DIR +R + VV+ER + ELRG C+ + + + Sbjct: 183 DEVWGVGRRLNRSLISRGIETVYQLREADIRTMRSRYGVVMERLISELRGISCIDMVDVS 242 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 P K++I+ SRSFG IT+ + AI +A + ++LR +H + F+ T F ++ Sbjct: 243 PPKKQILSSRSFGGVITEIDDLENAIAFHATKIGKQLRRQHSIAGMVHVFLMTDRFRKDK 302 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 P Y S+ L+ T + +I A L I++ G+ Y+KAG + + + V ++F Sbjct: 303 PQYHPHVSLPLIDATNSTIEINRYAMMGLHRIFRPGYEYRKAGACVSELSPESVFSPDMF 362 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA-GQGIQQQWQMKRAMLSPRYTTRSSDL 418 P ++M VMD +N + G GTL + + ++W+ K +SPRYTT +L Sbjct: 363 ----TDPKRRKIMQVMDEINDRFGNGTLRLSQDDMMHRRWRPKVDRVSPRYTTSWDEL 416 >UniRef50_A9E9W4 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Kordia algicida OT-1 RepID=A9E9W4_9FLAO Length = 421 Score = 334 bits (856), Expect = 4e-90, Method: Composition-based stats. Identities = 176/421 (41%), Positives = 255/421 (60%), Gaps = 4/421 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL DVN Y SCE VF P L GKPVVVLSNNDGCVI+R+ EAK LG+ MG + Sbjct: 1 MYALVDVNNMYCSCERVFNPKLIGKPVVVLSNNDGCVISRSNEAKKLGIPMGAVTHLFEK 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 +F+ V +SSNYELY D+S+R+M L + +P +E+YSIDEAF G + DL D G Sbjct: 61 IFKDHHVQVYSSNYELYGDLSDRLMHVLSKFTPDIEVYSIDEAFLQFKGFEHF-DLNDLG 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 EI+ T+LQ L + +GIA TK LAK+AN AKK+ ++TGGV + + +++K ++ L Sbjct: 120 IEIKETILQYIGLPISIGIAPTKALAKVANRIAKKFDKKTGGVYVMDSEHKRKKALNWLS 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++DVWGIGRR + KL+ GI + AD ++RK F+VV R ++L+G P L LEE Sbjct: 180 IEDVWGIGRRNASKLNRYGITKAIQFADAPDNWVRKEFSVVGLRLKKDLQGIPTLSLEEV 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I +RSF + + +++ I SY A+EKLR + C I F+ ++ F + Sbjct: 240 ESK-KSIAVTRSFAKTKNNLQDLKEIIASYGCVASEKLRVQKSCCNLIMVFVHSNRFRKD 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y NS VKL T S I A +++ +I++ G+ ++KAG+M+ QLN+ Sbjct: 299 LPQYNNSLVVKLPYSTNSSLIIAKYAKKAIQSIFKKGYEFKKAGIMVMGLVPDNAQQLNM 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F+ A +QLM+ +D LN+K G+ TL A Q + W M++ LS YTT +D+L Sbjct: 359 FE--ACNSDHKQLMSTIDRLNSKYGKNTLNIASQKLDSSWAMRQNNLSQNYTTDFNDILV 416 Query: 421 V 421 + Sbjct: 417 L 417 >UniRef50_Q5ZUT9 SOS mutagenesis and repair UmuC protein n=12 Tax=Legionellaceae RepID=Q5ZUT9_LEGPH Length = 431 Score = 334 bits (855), Expect = 6e-90, Method: Composition-based stats. Identities = 202/423 (47%), Positives = 267/423 (63%), Gaps = 9/423 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE +F+P L KP++VLSNNDGCVIAR+ E KALGV+MG P+F K Sbjct: 14 MFALVDCNNFYVSCERLFKPALANKPILVLSNNDGCVIARSNEVKALGVQMGVPYFAVKA 73 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ V FSSNY LYADMS RVMS LE+ P +EIYSIDEAF DL + +F Sbjct: 74 LCKQHKVHVFSSNYTLYADMSRRVMSVLEDNWPAIEIYSIDEAFLDLNTLPQSEH-DEFC 132 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R+++ VL+ T + V +GI TKTLAKLANH AKK R + N+E Q ++ + Sbjct: 133 RKLQKIVLRHTGIPVSIGIGATKTLAKLANHIAKKELRTP-----VFNIENQYHWLAKIV 187 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWGIGR+ KKL GI T DLA D++ I+K F+VVL+RTV ELRG C L++ Sbjct: 188 VGEVWGIGRQWGKKLVQQGIYTAHDLAGMDLQLIKKLFSVVLQRTVLELRGVSCGSLQD- 246 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +++ II S+SFG T+Y ++ QAI S+ ARA EKLR + +S FIKT+ F L+ Sbjct: 247 FESRKSIISSKSFGSMQTEYSALAQAISSHCARAWEKLRHQKLMACHLSIFIKTNQFRLD 306 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y + KL+ PT D R +I A L I+++G YQK GV LGD + QL+L Sbjct: 307 LPQYQQTIGFKLINPTDDLRHLIRCAKLCLRKIFRSGFHYQKVGVYLGDLIEKNCLQLDL 366 Query: 361 FDDNAPRP--GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 F+ + + +E+LM+V+D +N K GR TL A +G + W M+ SPRYTT S+L Sbjct: 367 FNQVSEKELNQTERLMSVLDEINTKYGRHTLRLAAEGHVKPWAMRAQSRSPRYTTSWSEL 426 Query: 419 LRV 421 V Sbjct: 427 PVV 429 >UniRef50_C7RB82 DNA-directed DNA polymerase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB82_KANKD Length = 422 Score = 332 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 169/420 (40%), Positives = 253/420 (60%), Gaps = 6/420 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 +ALCDVN+FY SCE +FRPDL+GKPV+VLSNNDGC+IA + EAKALG+ M P+ + + + Sbjct: 8 YALCDVNSFYVSCERMFRPDLYGKPVIVLSNNDGCIIALSDEAKALGIPMAAPYHEARPI 67 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 ++ V CFSSNY LY D+S R LE+ +V YS+DE+F G +N DLT + Sbjct: 68 IQKHKVTCFSSNYGLYGDISKRFNWILEQHCDQVAPYSVDESFMRFEGFQN--DLTQRAQ 125 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 IR+ + + L V +G+ TKTLAK+ANH AKK + T GVVDLSN ++ + + V Sbjct: 126 AIRSELWRCLSLPVCIGLGPTKTLAKVANHFAKKHKTTTHGVVDLSNPATRKWALKQIAV 185 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +WGIGR++SKKL I T DL + D + +++ F+V +ERT+ ELRG+PCL+ E Sbjct: 186 AKIWGIGRQLSKKLILQDIHTAWDLHNADYKTLQRMFSVNMERTILELRGQPCLKFSELP 245 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 K+ I+ SRSFG+ ++ Y +++A+ + +R EKLR++ I+ F+ Sbjct: 246 EPKKSILNSRSFGKPLSIYSDLKEAVAHHTSRCCEKLRNQSSLASSITVFL-YGQRKELV 304 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 + S +++L PT D+ + A + L I +AG Y+KAG+ML Q ++F Sbjct: 305 YHNRPSVTLQLPEPTDDTSIFLQAVEQGLRHIVKAGESYKKAGIMLNGIVDSHGYQPDIF 364 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 + RP LM +D +N + G+ T+ F G + W M+ SP YT+R D+L++ Sbjct: 365 EGVPQRPE---LMESLDKINRRYGQDTVKFGSLGFAKNWAMRANSCSPHYTSRWQDILKL 421 >UniRef50_Q11QJ9 Nucleotidyltransferase/DNA polymerase involved in DNA repair/SOS mutagenesis and repair n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11QJ9_CYTH3 Length = 419 Score = 331 bits (848), Expect = 3e-89, Method: Composition-based stats. Identities = 179/422 (42%), Positives = 248/422 (58%), Gaps = 9/422 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL D N FY SCE VFRPDL +PVVVLSNNDGCVI+R+ EAKA+GVKMG+P+FK K+ Sbjct: 1 MYALIDCNCFYVSCERVFRPDLRQQPVVVLSNNDGCVISRSDEAKAIGVKMGEPFFKMKE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L R V FSSNY LY D+S+RVM TL + P +E+YSIDEAF L DL G Sbjct: 61 LVRNGKVTAFSSNYTLYGDLSDRVMKTLASIVPDIEVYSIDEAFLHLNESHT--DLETLG 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR TV Q T + VGVGIA TKTLAKLAN +KK G V + + ++ ++A Sbjct: 119 HTIRNTVKQHTGIPVGVGIAPTKTLAKLANRLSKK-----TGGVHIIYPDNIQEKLNACA 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + DVWGIGRR +K+L A + T+ + ++R+HF+V+ RT +EL+G PC+ +E+ Sbjct: 174 LQDVWGIGRRNAKRLQANYVDTIEQFVNQREEWVRQHFSVIGLRTYKELKGIPCIDMEDE 233 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I SRSFGE + S+++AI ++AA AEKLR + + + S F Sbjct: 234 LTEKKSICTSRSFGELQNTFASIQEAIATHAASCAEKLRKQKCAAAGMYVSLSKSRFTDQ 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E +KL T ++ +I A++ L+ +++ Y+K GV + D + QLNL Sbjct: 294 EGDKYFGTYIKLPQATNNTATLIQYASKGLELLFKKDVYYKKCGVTVIDIVPEEKIQLNL 353 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ-WQMKRAMLSPRYTTRSSDLL 419 F + L +D LN K G+ L A QG W+++ +SP YTTR ++L Sbjct: 354 F-EPQKNARLHALEDTIDKLNQKLGKNVLRQAIQGNDNNTWKLRCENMSPNYTTRIGEIL 412 Query: 420 RV 421 V Sbjct: 413 VV 414 >UniRef50_B9M459 DNA-directed DNA polymerase n=14 Tax=Bacteria RepID=B9M459_GEOSF Length = 420 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 95/400 (23%), Positives = 165/400 (41%), Gaps = 22/400 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVV-LSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAF+AS E P L GKPV V S+ V + EA+A GVK G ++ K Sbjct: 14 IIMHVDMNAFFASVEQQNDPRLRGKPVAVVGSSKRTIVTTCSYEARAFGVKTGMALWEAK 73 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 +V + Y +S+ +M + + +P VE +SIDEAF D++G + + Sbjct: 74 SCCPNLILVVGKNR--EYTRISSLIMKLMYDFTPLVETFSIDEAFLDISGSLSLFGTPEN 131 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++A + + LT +GIA K LAKLA+ K + + M Sbjct: 132 IASLLKARIGDQFGLTCSIGIAPNKLLAKLASDMQKPDG------LTVIKPAEVALTMDR 185 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ D+ GIG++ K L +GI+T DL ++ +R+ F +V E G + Sbjct: 186 TPIRDMCGIGKKTEKSLTMLGIRTCGDLGRFPVKLLRQKFGIVGEALHLMGLGVDDSPVV 245 Query: 239 EFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + S + + + + + + A ++R + + ++ + Sbjct: 246 PQEESDLVKSVGHSMTLEKDLEKREDILRYLLQLAEMVGRRMRRYGVAGKTVCLSVRYAD 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + S + L T S +I A LD++ + GV L + Q Sbjct: 306 F-----FTNFSRQLTLPEYTNLSAEIYRGAVTLLDSVELT-QPVRLLGVKLSNLRHQD-E 358 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 QL LF L MD +N++ G ++ + Sbjct: 359 QLPLF---EGERKKAHLAKAMDEVNSRFGEFSVTYGTLLT 395 >UniRef50_C0VGI8 Nucleotidyltransferase/DNA polymerase n=4 Tax=Acinetobacter RepID=C0VGI8_9GAMM Length = 432 Score = 330 bits (846), Expect = 5e-89, Method: Composition-based stats. Identities = 169/426 (39%), Positives = 247/426 (57%), Gaps = 6/426 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL DVN Y SCE VF P L +PVVVLSNNDGCV++R+ EAK LG++M P+F+ ++ Sbjct: 7 IFALVDVNNAYVSCERVFNPKLENRPVVVLSNNDGCVVSRSYEAKQLGIRMAVPFFQIEE 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV--EIYSIDEAFCDLTGVRNCRDLTD 118 + R+ V FSSNY LYA+MS R M+ L E+YSIDE F +LT ++ DL+ Sbjct: 67 IIRQHHVAVFSSNYALYAEMSRRFMNILASFVDPCEQEVYSIDECFLELTAYQHHYDLSK 126 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS-NLERQRKLMS 177 + +I +TV + L +GI +KT AKLANH AK G + + L+ Sbjct: 127 YAFQILSTVKKWLGLPCCIGIGYSKTQAKLANHLAKTHASFNGVCNFVDEDPCIIEDLLM 186 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 PV +VWG+GR+I ++L+ M I +V+DL TD + + KHF+VVLE TV+EL+G CL++ Sbjct: 187 HTPVGEVWGVGRKIRQRLEKMNIYSVMDLLQTDPKRMGKHFSVVLENTVKELQGVACLEI 246 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E+ +Q+I+ SRSFG+ I D S+ A+ +A RA E+LR + C+ + I+T+ F Sbjct: 247 EDVISDRQQILSSRSFGQPIEDKNSLSGALTEFALRAVERLRKQKLLCKAVGISIRTNRF 306 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + Y + V L+ + D I+ A + LD I+Q GHRY+KA V+L D Q Sbjct: 307 NKDAYYRPFTV-VYLVDYSDDRLVIMKAVQQGLDRIYQVGHRYKKAEVILLDIIPQHRHA 365 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG--QGIQQQWQMKRAMLSPRYTTRS 415 ++LF + + L D +N + GR + F + W M + SP Y T+ Sbjct: 366 VDLFYNTEEMLTRQNLSVAFDEINERFGRDVMTFGRLIGPQGRAWGMTQNHKSPSYLTKW 425 Query: 416 SDLLRV 421 D+LRV Sbjct: 426 EDVLRV 431 >UniRef50_A5FIG7 DNA-directed DNA polymerase n=10 Tax=cellular organisms RepID=A5FIG7_FLAJ1 Length = 446 Score = 330 bits (846), Expect = 7e-89, Method: Composition-based stats. Identities = 172/422 (40%), Positives = 254/422 (60%), Gaps = 4/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FYASC+ VF P L KP+V+LSNNDGCVI+R+ EAKALG+ M P FK + Sbjct: 28 MFALVDCNNFYASCQRVFEPHLREKPIVILSNNDGCVISRSDEAKALGIPMAIPAFKYES 87 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 +F+ + +SSNY LY DMSNRVM+ L +P +EIYSIDEAF +G D+ G Sbjct: 88 VFKEKNIFVYSSNYPLYGDMSNRVMNLLRTYTPEIEIYSIDEAFLKFSGYD-LFDMNTLG 146 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++R V Q T + V +G A TK LAK+AN A+K+ +T V + + E++ K + Sbjct: 147 LKMRKEVTQGTGIPVSIGFASTKALAKMANKIARKFADRTQNVHCIDSEEKRVKALKWSK 206 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++DVWGIGR+ +K+L A I T + ++RK +VV R EL G+P L+LEE Sbjct: 207 IEDVWGIGRKHAKRLKAKKINTAYEFTQLPDAWVRKEMSVVGLRLKHELEGKPTLELEEA 266 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A ++ I +RSF +R T Y + + I ++ A AEKLR ++ +C ++ FI+TS Sbjct: 267 AD-RKMIATTRSFEKRYTSYEEISERISTFTASCAEKLRRQNCHCNMVTVFIQTSFIKNE 325 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E +Y S ++ PT + ++ AA + AI++ G+RY+KAGV++ QLNL Sbjct: 326 ESHYSRSITITTDFPTNSTIELNAAAQKGFKAIFKKGYRYKKAGVIVMGLTPNSETQLNL 385 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F+ P + LM+V+D +N G + F Q + +QW+MK+ LSP+++T D++ Sbjct: 386 FE--TSNPKHQPLMSVIDKMNQNYGNNKIKFGVQSLGRQWKMKQNRLSPKFSTSLKDVIT 443 Query: 421 VK 422 VK Sbjct: 444 VK 445 >UniRef50_P07375 Protein mucB n=137 Tax=root RepID=MUCB_ECOLX Length = 420 Score = 330 bits (845), Expect = 7e-89, Method: Composition-based stats. Identities = 231/421 (54%), Positives = 276/421 (65%), Gaps = 4/421 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL DVN YASCE FRPDL + V VLSNNDG ++ARN AK G+KMGDP+FK + Sbjct: 1 MFALIDVNGMYASCEQAFRPDLANRAVAVLSNNDGNIVARNYLAKKAGLKMGDPYFKVRP 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + R + FSSNY LYA MS R + +E L+ VE YSIDE F D G+ L FG Sbjct: 61 IIERHNIAIFSSNYTLYASMSARFAAVVESLASHVEQYSIDELFVDCKGITAAMSLDAFG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R++R V + T L GVGIA+TKTLAKL NHAAK W GGVV L + R +KLMS LP Sbjct: 121 RQLREEVRRHTTLVCGVGIARTKTLAKLCNHAAKTWPAT-GGVVALDDGARLKKLMSILP 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWG+G R K L MGIKTVLDLA D R IRK F VVLERTVRELRGE C LEE Sbjct: 180 VAEVWGVGHRTEKALATMGIKTVLDLARADTRLIRKTFGVVLERTVRELRGEACFSLEEN 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P KQ+I+ SRSFG+R+ M+QA+ +AARAAEKLR+E QYCR IS FI+TSP+++ Sbjct: 240 PPAKQQIVVSRSFGQRVETLTDMQQAVTGFAARAAEKLRNERQYCRVISVFIRTSPYSVR 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + Y N A+ KL TQDSR II AA L IW+ Y KAGVML DF + L+L Sbjct: 300 DTQYANQATEKLTVATQDSRTIIQAAQA-LARIWREDIAYAKAGVMLADFSGKEAQ-LDL 357 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 FD P GSE LM V+D +N + G+ L+FAGQGI + M+R MLSP YTT + Sbjct: 358 FDSATPSAGSEALMAVLDGINRR-GKNQLFFAGQGIDNSFAMRRQMLSPDYTTDWRSIPI 416 Query: 421 V 421 Sbjct: 417 A 417 >UniRef50_C0QCD0 UmuC1 n=3 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCD0_DESAH Length = 422 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 177/423 (41%), Positives = 242/423 (57%), Gaps = 6/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FY SCE VF P L GKPV+VLSNNDGC +AR+ EAKALG+ MG P+F+ K Sbjct: 3 VFALVDCNNFYVSCERVFNPQLVGKPVIVLSNNDGCAVARSNEAKALGIAMGAPFFQIKA 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + GV FSSNY LY DMSNRVM TL +P +EIYSIDEAF DLT DL ++ Sbjct: 63 IVEGNGVRVFSSNYPLYGDMSNRVMQTLAPFTPAMEIYSIDEAFLDLTNF-AFTDLVNYA 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R++R TV + T + V +GIA TKTLAK+AN AKK + GV+DL+ + + P Sbjct: 122 RKMRNTVQRNTGIPVSIGIAPTKTLAKIANRIAKK-SSKADGVLDLTPTSYRDLALEMTP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + DVWGIGRR++ GI+T LD IR + R REL GE C LE+ Sbjct: 181 IGDVWGIGRRLTPFFKYRGIRTALDFKSAAPSLIRGKMGINGIRMQRELAGESCYPLEDC 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ + SRSF T + + QA+ Y +R AEKLR + + ++ ++ T+ F+ Sbjct: 241 PARRKSVAVSRSFKTPATTFDELSQAVSLYISRGAEKLRHQGSFTETLTVYVMTNRFSP- 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + YY NS + L T + + ++I L I+Q+G Y KAG++ G QL+L Sbjct: 300 QSYYYNSKTAVLPTASNSTPELIKQGKGLLKQIFQSGKYYTKAGIVFSSLTRDGQVQLDL 359 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI--QQQWQMKRAMLSPRYTTRSSDL 418 FD R S+ LM MD +NA+ G + +A G+ W+ + SP YTT + L Sbjct: 360 FD-TTDRSRSDNLMQAMDKINARMGSHAVRYAAMGLSGHPSWKGACSHRSPAYTTEWNQL 418 Query: 419 LRV 421 L + Sbjct: 419 LNI 421 >UniRef50_A0LG84 DNA-directed DNA polymerase n=4 Tax=Deltaproteobacteria RepID=A0LG84_SYNFM Length = 425 Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats. Identities = 97/395 (24%), Positives = 170/395 (43%), Gaps = 19/395 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E RP+ GKPV+V G V A + EA+ GV P F+ K L Sbjct: 37 IMHVDMDAFYASVEQADRPEFKGKPVIVGGARRGVVSAASYEARRFGVHSAMPVFQAKRL 96 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFG 120 G + Y ++S VM L +SP VE SIDEAF D+TG G Sbjct: 97 CP--GGIFLPVRMGRYKEVSKVVMDILCGISPLVEQISIDEAFVDITGTEALHGSPESLG 154 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R +++ + T +T VGIA K +AK+A+ K + + +R ++ LP Sbjct: 155 RRVKSQIRAATRVTCSVGIAPGKFVAKIASDIHKPDG------LTIVEDDRVEAFLAPLP 208 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ + GIG++ S+ L ++G++ + D+ F K + RG + + Sbjct: 209 VERIPGIGKKTSEALRSLGVRAIGDVLRFPASFWVKRLGAWGVKLHERARGVDPAPVIAY 268 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + +F E + D ++ + + + ++LR E R ++ +K + F+ Sbjct: 269 S-QAKSCSAEDTFPEDVDDVETLEKWLFVQSEEVGKELRRESFRGRTVTLKVKFADFS-- 325 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S L T ++ I A+R L A+ + + + GV + + + + Sbjct: 326 ----SITRSHTLREATDCTQLIFGTASRLLRAL-KLNRKVRLVGVGVSNLSAMPEQKPVF 380 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 ++ +L MD ++ + G G L Sbjct: 381 --SDSMLVRQRKLDRAMDRIHERFGHGALRRGRVL 413 >UniRef50_Q39ZU3 Damage-inducible protein DinP n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q39ZU3_PELCD Length = 399 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 104/407 (25%), Positives = 169/407 (41%), Gaps = 19/407 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AFYAS E + P+L G+PVVV + G V A + EA+ G+ P + Sbjct: 10 IILHLDMDAFYASVEQLDSPELKGQPVVVGGHRSRGVVCACSYEARTFGIHSAMPMSRAL 69 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + + Y ++S +V + VE S+DEAF D+T R D Sbjct: 70 RLCPQA--IVQPVRMARYQEISRQVFDIFGRYTDLVEPLSVDEAFLDVTASRRLFGEGWD 127 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +IR V L + GIA K LAKLA+ AK ER + + Sbjct: 128 IAEKIRRDVRDELGLPISAGIAPNKFLAKLASEQAKPDGVFQV-------PERVDDFLLS 180 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ +WG+G + K L MG++TV DL D + + F ER ++ GE +E Sbjct: 181 LPLKRLWGVGPVLLKSLQKMGLRTVADLRHMDRADMERCFGQAGERLIQLAHGEDERPVE 240 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + I +F + I + +M A+ R A +LR ++ +K + F+ Sbjct: 241 PQ-RSLKSIGHEDTFDQDIFERETMHVALLDLVERVAARLRKHGLIGTTLTLKVKYADFS 299 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S + +RD+++ A + L+ + GV L + Q Sbjct: 300 ------TVTRSRSVADGICHARDMLHLAKQLLEKTEAGKKPVRLLGVSLANLMDADSGQG 353 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 LFD+ R + L MD + + G L A ++ + R Sbjct: 354 LLFDE-DRRNQLKGLEQAMDHVRERYGEKGLCRATLVGHRRRSLTRE 399 >UniRef50_C6BW91 DNA-directed DNA polymerase n=4 Tax=Bacteria RepID=C6BW91_DESAD Length = 389 Score = 328 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 102/401 (25%), Positives = 167/401 (41%), Gaps = 20/401 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + P+L GKPV V S + + A + EA+ GV+ P + Sbjct: 5 IMHIDMDAFFASVEQLDNPELRGKPVGVGSMHERSVLSAASYEARKFGVRSAMPVRQALK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L + + S + Y ++S +VM+ L SP VE SIDEA+ D+TG Sbjct: 65 LCPQ--LQVVSGSRHRYKEISRKVMAALSNYSPIVEQASIDEAYIDITGTEKLFGTPLQI 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R I+A + + T LT VGIA K LAK+A+ K + E+ + + L Sbjct: 123 ARSIKADIRKATGLTASVGIAPVKFLAKIASDLNKPDGIS------IITAEQVQDFLKTL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV+ + G+G++ +L + GI DL F ++ F + G + E Sbjct: 177 PVEKIPGVGKKALPRLRSYGITYAADLRRYPPEFWKERFGERGLVLYEKGAGIDPTPVTE 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + +FGE ++D +++ + + R A +R R ++ +K F Sbjct: 237 GG-AMKSSSAENTFGEDVSDIHTLKTLLLKQSERIAADIRKHGVKGRTVTLKVKFPDFR- 294 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S L + T + I A LDA G + GV + +F + Sbjct: 295 -----QITRSRTLDSRTSHAGTIYKTACSLLDAELPIG-PIRLIGVGISNFEERNRQLSL 348 Query: 360 LFDDNAPRP--GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 L D P+ EQL +D + K G+ L + Sbjct: 349 LDDPEKPKESKRLEQLDKAVDQVRLKFGKDILTRGRLLEDE 389 >UniRef50_C6PAP1 DNA-directed DNA polymerase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PAP1_CLOTS Length = 414 Score = 328 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 94/402 (23%), Positives = 175/402 (43%), Gaps = 19/402 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D+NAFYASCE L GKPVVV + G V+ + EA+ G+K G P ++ Sbjct: 4 ILHIDMNAFYASCEQSKDKSLKGKPVVVAGDPSKRHGIVLTASYEARKYGIKTGMPNWQA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 + L + +++ Y S ++++ L+E SP VE +SIDEA+ D+TG + Sbjct: 64 RTLC--NDAIFLKPDFDSYIQYSIKMINILKEFSPLVEQFSIDEAWVDVTGCEDLFGSPI 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + +I++ + L +GI++ K +AK+A+ K + LE+ + ++ Sbjct: 122 EIAHKIQSRIKDSLDLPCSIGISENKLVAKMASELKKPLG------ITELPLEKIKDMIW 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V+++ IG SKKL + GI T+ DLA+T + F+ F + G + Sbjct: 176 PLDVENLIWIGSARSKKLKSFGINTIGDLANTPMTFLINLFGKPGKDIYYFANGIDLSPV 235 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 +A T + + + TD +++ S + ++R ++ + +S +K + F Sbjct: 236 RPYAITAKSFGNTITLPRDYTDIEDIKRGFLSLSEMVGSRMRKQNFMGKTVSITVKDNNF 295 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S + T + DI NAA + + + + GV + + Sbjct: 296 ------KSITRSRTI-DYTVLTEDIFNAAMKLFKENYDTNFKIRMLGVSVSNLVKIDENI 348 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 NA ++L +D + K G ++ ++ Sbjct: 349 QLCLFQNAKYENLKKLNYAIDMIRDKYGFDSISRGLILTGEK 390 >UniRef50_C9LED2 UmuC protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LED2_9BACT Length = 422 Score = 327 bits (839), Expect = 3e-88, Method: Composition-based stats. Identities = 161/423 (38%), Positives = 238/423 (56%), Gaps = 3/423 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL D N+F+ S E F P L GKPV VLS+NDG ++A EAK +G+K GDP FK +D Sbjct: 1 MWALADCNSFFCSVEKAFHPGLRGKPVCVLSSNDGNIVALTPEAKKIGIKRGDPVFKVRD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L V FS+N +LYA MS RV + L + VE YSIDE+FC L G D+ +F Sbjct: 61 LISCHNVKLFSANMKLYAAMSRRVTNMLRKRIHHVENYSIDESFCCLDGYEQLYDMENFM 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 REI V T + + VGIA +KTLAK+ + AK+++ V + E++RK ++ + Sbjct: 121 REIVENVRLWTAIPMSVGIAPSKTLAKIGSKFAKQYKGYRS-VCLIDTEEKRRKALALVD 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + DVWGIGRR KKL I T L AD ++R F + + T +EL G C+ E Sbjct: 180 LSDVWGIGRRTLKKLAYYNIHTPLAFADKSENWVRSRFTLPMIHTWKELNGVDCIDTTEV 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 Q I SRSFG +T+ ++ ++ +A+ A KLRS+ CR ++ FI T+ F + Sbjct: 240 IAK-QTICTSRSFGNMVTELEDLKASVAHFASSCANKLRSQSSLCRSVTVFIATNRFRED 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y N + L T D+ +I N A L +++ G +Y+K+GV+LGD S +L Sbjct: 299 LPQYNNMLTYTLPIATADTLEITNTAIAILQELYRPGIQYKKSGVVLGDISSGKAISQDL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI-QQQWQMKRAMLSPRYTTRSSDLL 419 FD + R QLM +D +N + G+ T+ +GI +Q+W K +P Y T ++++ Sbjct: 359 FDHISNRSERHQLMHFIDNINQRYGKKTILLGIEGIGKQKWTAKCEQRTPNYLTDINEIM 418 Query: 420 RVK 422 ++ Sbjct: 419 TIR 421 >UniRef50_B4YK21 TumC n=1 Tax=Tetrathiobacter kashmirensis RepID=B4YK21_9BURK Length = 438 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 191/425 (44%), Positives = 256/425 (60%), Gaps = 9/425 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + L D N FY SCE VFRP L GK ++ LSNNDGCVI+R EAKA+G+KMG PWF+ K L Sbjct: 18 YGLIDGNCFYCSCERVFRPFLKGKALISLSNNDGCVISRTDEAKAMGIKMGQPWFEIKHL 77 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 G++ SSN+ LY DMS+R+MS + SPR EIYSIDE+F D +G+ DL+ + + Sbjct: 78 -EEKGLMALSSNFALYGDMSDRMMSVISRFSPRQEIYSIDESFADFSGIT--EDLSAYSQ 134 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER--QRKLMSAL 179 +IRA VL+ T + VGI TKTLAKLANH AKK Q GV DL+ L+R +M + Sbjct: 135 KIRAAVLRETGIPTCVGIGATKTLAKLANHIAKK-QPSWSGVCDLTQLDRYQLADIMKNI 193 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V +VWGIGRRI+K+L+ +GI TV DLA R F++V+ +TV+ELRG + LEE Sbjct: 194 EVGEVWGIGRRIAKRLNELGIYTVFDLARMKPEAARAEFSIVVGKTVQELRGISRIDLEE 253 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 A K++II SRSFG +TD ++ A+ + A A KLR ++ + FI+TSPF Sbjct: 254 VADPKKQIISSRSFGLPMTDLAGLQSALSEFVAIACNKLRGQNSVAASMQIFIRTSPFD- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 YGNS V PT D+ A ++LDAIW+ G +Y+KAGVML D Q Sbjct: 313 KGKQYGNSRLVTPPYPTADNLVFTKHALKALDAIWRPGFKYKKAGVMLMDISPADAVQGE 372 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ--WQMKRAMLSPRYTTRSSD 417 LF QLM +D +NA+ GRG++ G + W M++ S YTT + Sbjct: 373 LFPVEPEHGKRAQLMVALDGINARYGRGSVKTGSIGFHDREHWYMRQERKSQGYTTNWDE 432 Query: 418 LLRVK 422 +L + Sbjct: 433 VLIAR 437 >UniRef50_A8ZLK7 DNA polymerase V, putative n=4 Tax=Cyanobacteria RepID=A8ZLK7_ACAM1 Length = 421 Score = 327 bits (838), Expect = 5e-88, Method: Composition-based stats. Identities = 178/421 (42%), Positives = 258/421 (61%), Gaps = 6/421 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + LCD N+FYASCE+ P L KPVV+ SNNDG V+ NA+ KALG+ MG P FK + Sbjct: 5 LIGLCDCNSFYASCESALNPSLQHKPVVIASNNDGVVVTANAKGKALGLVMGVPLFKVQA 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ V FSSNY LY D+S+RVM+ LE +P EIYSIDE F + + T + Sbjct: 65 LIKKHDVRVFSSNYALYGDLSSRVMTILETFTPEQEIYSIDECFMRMPE---FAEATTYS 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++R TVLQ T + V +GI+ +KTLAK+ANH AKK Q+Q GGV D+S +++ P Sbjct: 122 HKVRKTVLQWTGIPVSIGISTSKTLAKIANHVAKK-QKQYGGVFDISAARNAEGILATFP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V D+WGIGR+ +K L + GI++ +L D + IRK VV R + ELRG CL LE Sbjct: 181 VADIWGIGRQYNKWLLSQGIESAKELRDANEGLIRKKMGVVGVRMIHELRGISCLPLELV 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A K+E SRSFG+ +T+ +++AI +YA+RAAEKLR + Q + F +TSPF Sbjct: 241 AKPKKETCVSRSFGQPVTELADLQEAIAAYASRAAEKLRHQEQVAEAMVVFARTSPFKS- 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 Y+ SA+V+ T + I+ +A ++ I++ G +QKAGV++ + Q +L Sbjct: 300 -GYFRQSATVQFPIATNYTPTIVESARNAMARIYEPGREFQKAGVLMVGLCPETTIQGHL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 ++ + ++LM++MD +N + GRGTL A G++Q W+M+ SPRYTT ++L Sbjct: 359 WEKDEGWEKRKRLMSIMDEVNDRFGRGTLEIAASGLRQTWRMQSKWRSPRYTTCWAELPV 418 Query: 421 V 421 Sbjct: 419 A 419 >UniRef50_C6BX75 DNA-directed DNA polymerase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BX75_DESAD Length = 423 Score = 326 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 173/423 (40%), Positives = 247/423 (58%), Gaps = 5/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FY SCE +FRP++ +PVVVLSNNDGCVI+R+ EAK +GV MG P +K + Sbjct: 3 IFALVDCNNFYVSCERLFRPEIKHRPVVVLSNNDGCVISRSQEAKDIGVPMGAPAYKYQS 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 F + V FSSNY LY D+S RV +TL L+P +E+YSIDE+F + R+L G Sbjct: 63 FFLQNNVEIFSSNYALYGDLSQRVTATLASLTPDLEVYSIDESFLEF-PPCMLRELPSIG 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +EIR +L+ T + V VG TKTLAK+A+ AKK+ + G L +L+ +P Sbjct: 122 KEIRTRILKWTGIPVSVGFGSTKTLAKVASRFAKKYPQT-EGTFSLCGRNDLDRLLDKVP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V DVWGIGRR K+L A G+ T D +++K+ +V T ELRG PC +L+ Sbjct: 181 VTDVWGIGRRHGKRLIARGVSTARTFKDLPNLWLKKNMSVTGLHTALELRGTPCFELDNS 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I SRSFG +T + +++ +Y ARA EKLR + + ++ T+ F N Sbjct: 241 PKPKKTISSSRSFGRPVTALSDLEESVAAYVARAGEKLREQQSLTNGVMVYLTTNRFN-N 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y NSA+ L T + ++IN + + +I++ G Y+K GV+L D + Q NL Sbjct: 300 LPQYSNSATRMLPIATDYTPELINTGLQCIRSIYKEGFSYKKTGVVLLDLCGKYNRQCNL 359 Query: 361 --FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 D A E +M ++D+ N + GR TL +A +G++Q WQM R SP YTT DL Sbjct: 360 LELDHKAESAKKEAIMNLLDSANTRFGRRTLSYASEGLEQPWQMNRKYKSPSYTTSWDDL 419 Query: 419 LRV 421 ++ Sbjct: 420 PKI 422 >UniRef50_C6M791 Protein UmuC n=2 Tax=Neisseria RepID=C6M791_NEISI Length = 423 Score = 325 bits (834), Expect = 1e-87, Method: Composition-based stats. Identities = 180/423 (42%), Positives = 246/423 (58%), Gaps = 9/423 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N+FY SCE VFRP+L PVVVLSNNDGCV+AR+AEAKALG+KMG+P+F+ K Sbjct: 8 MFALIDGNSFYCSCERVFRPELKNVPVVVLSNNDGCVVARSAEAKALGIKMGEPYFRVKH 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + FSSNYELYAD+S R+M T+ P VEIYSIDE F + N D G Sbjct: 68 LVSQGRLKAFSSNYELYADLSRRMMETIAGCVPAVEIYSIDECF---ATMANIGDHAGLG 124 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER--QRKLMSA 178 REIR VLQ + VGIA TKTLAK N+ AKK+ GGVV ++ + + + + Sbjct: 125 REIRRRVLQWVGIPTCVGIAPTKTLAKFCNYLAKKYPSHFGGVVVWTDWTESIRLRALRS 184 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 V ++WGIG +I+ KL A GI T LD D +R + V +ERT RE++G C L Sbjct: 185 EAVSEIWGIGNKIAAKLAAQGIFTALDFVLADTATLRLRYGVTIERTQREMQGIVCDGLH 244 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 KQ ++ SRSFG RI +++ AI + + AE LR + +S F+ T F Sbjct: 245 PKPAPKQNLVRSRSFGVRIDTLDALQAAITHHISSGAETLRKDKLTASSVSVFLHTDFFK 304 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 +EP Y NS ++ L+ PT D+ + +AA + L I+++G+ Y+K G+ L Q Sbjct: 305 ESEPQYHNSQTISLIVPTSDTVLLNHAAQKILATIFRSGYLYKKCGIELHGLKPAEQIQA 364 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 +L+ P +M D +N + G+G L A + + W+M R LS YTTR +DL Sbjct: 365 DLWQSVTNNP----VMEAWDKINRQYGKGRLKLASELLANNWEMNRDRLSQCYTTRFTDL 420 Query: 419 LRV 421 V Sbjct: 421 PIV 423 >UniRef50_C6CYA7 DNA-directed DNA polymerase n=3 Tax=Bacillales RepID=C6CYA7_PAESJ Length = 422 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 93/424 (21%), Positives = 166/424 (39%), Gaps = 21/424 (4%) Query: 1 MFALCDVNAFYASCETVFRPD-LWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWF 56 + D+NAFY S P+ GKP V + G ++ + A++ G+K G Sbjct: 14 VILHLDMNAFYCSVHEAEEPEKYKGKPTAVAGSVELRKGIIVTCSYAARSKGIKTGMTVR 73 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + + ++ ++ELY S M E +P VE SIDE + D+TG + Sbjct: 74 QAMRMCP--NLIIIQPDFELYRKYSRGFMKIAREYTPLVEPISIDECYMDITGSKIFGSP 131 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + ++ + + L +G+A K LAK+A+ K + + L ++ Sbjct: 132 LEIAEALQKRIAEEWTLPCSIGVAPNKLLAKMASDMKKPNG------LTVLRLRDVPTIL 185 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 P D + G+G++ + KL+ + I+T+ LA D + + F + G + Sbjct: 186 WDKPCDVLHGLGKKTADKLERLRIRTIGQLAAADEELLIRQFGIYGSWMKSAAHGIDHSE 245 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + I + + +TD + + + A + A +LR + + I+ Sbjct: 246 VRADREQSKSIGHTTTLPYDVTDREDAHRILLNLADQTARRLRRQKLMASTVQITIRKPD 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF--FSQG 354 A + S L PT + I + A R D W+ + GV L + + Sbjct: 306 MA------TITRSSTLRAPTHSTDMIYHEACRLFDEHWKGSEPARLLGVTLQNLTAEEET 359 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 QL+LFD +P E L MD L K G + AG + R + + Sbjct: 360 AVQLDLFD-YKEQPRKEALTKTMDVLRDKFGENAVLTAGMLGDDPSVLIRNKRLRGTSLQ 418 Query: 415 SSDL 418 +L Sbjct: 419 KDEL 422 >UniRef50_Q1QXT4 DNA-directed DNA polymerase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXT4_CHRSD Length = 426 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 180/424 (42%), Positives = 243/424 (57%), Gaps = 4/424 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M L D N FY SCE VF+P L G PV V+SNNDGCVIAR+ E KALGV+MG P F+ ++ Sbjct: 1 MIGLVDCNNFYVSCERVFQPRLEGVPVGVMSNNDGCVIARSNELKALGVEMGTPAFELQE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + + SSNYELY DMS RV LEE S VE YSIDE F G Sbjct: 61 WVNQGRIHLLSSNYELYGDMSARVREVLEEFSAGVEPYSIDEMFVRFDGFDAAT-TQALA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R + V Q T + V VG+A T+TLAKLAN AAKK G V +N + R+L+ Sbjct: 120 RTLYRNVRQFTGIPVCVGVAPTRTLAKLANRAAKKLPEYGGTCVMHANGDDTRRLLEHTA 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + D+WG+G+R+ ++L GIKT DL D + IR+ F+V LERTVREL+G PC++L + Sbjct: 180 LGDIWGVGQRLVERLALQGIKTAWDLRQADPKAIRQRFSVTLERTVRELQGTPCIELHDA 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I+ SRSFG D ++ AI +A R AEKLR + + R + F+KT+ + Sbjct: 240 DRPRDRIMTSRSFGRLTGDLGDLQDAIRQHAQRGAEKLRRQDSHARAVLVFLKTNRHRPD 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y S ++L PT DSR I+ AA + L+ I++ G+R+ K GVML D QL+L Sbjct: 300 LPQYSPSIVIELPEPTDDSRPILAAARQGLETIYRRGYRFMKGGVMLLDLVDANREQLSL 359 Query: 361 FDDNA---PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 D R +LM +D LN K G+GT+ W ++ A +PR+TT+ + Sbjct: 360 LDTPEREAQRERDHKLMAALDALNGKMGKGTVRLGVPRQNAAWHLRCAHRTPRWTTQWRE 419 Query: 418 LLRV 421 L R+ Sbjct: 420 LPRI 423 >UniRef50_Q0ACU7 DNA-directed DNA polymerase n=3 Tax=Nitrosomonas eutropha C91 RepID=Q0ACU7_NITEC Length = 431 Score = 325 bits (832), Expect = 2e-87, Method: Composition-based stats. Identities = 175/431 (40%), Positives = 251/431 (58%), Gaps = 14/431 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FY SCE VF+P L KP++VLSNNDGC IAR+ +AKALGVKMG PWF+ K Sbjct: 3 LFALIDGNNFYCSCERVFQPQLQNKPLIVLSNNDGCAIARSEQAKALGVKMGHPWFQVKH 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + G++ S+N+ LY DMSNR+MS EL EIYSIDE F L G+ D+T Sbjct: 63 LEKSAGLISLSANFALYGDMSNRMMSLASELGDSQEIYSIDECFLGLQGIP---DVTQRA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK---------KWQRQTGGVVDLSNLER 171 ++ RA +LQ + +GI +KTLAKLANH AK + + + Sbjct: 120 KDTRAKILQWIGIPTCIGIGASKTLAKLANHIAKDAERKPGSYPPRLAQVCNLVELTERQ 179 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + L + ++WGIGRRI ++L GIKTV D + D +RK F+V LERT REL G Sbjct: 180 RMYLFGITDIGEIWGIGRRIGQQLKDAGIKTVKDFVELDPGTVRKRFSVTLERTWRELHG 239 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + C+ LEE K+EI +R+FG+ + D S+ +A+ + +RAAEKLR + + I F Sbjct: 240 QSCIDLEEIPAPKKEIAYTRTFGQPVRDLVSLTEAVTEFTSRAAEKLRRQQSFASAILVF 299 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 I TS P Y S +V L+ P D+ +++AA R L I++ G+ + KAGV+L D Sbjct: 300 IHTSKHRA-GPQYARSITVPLVRPASDTNSLLSAAIRGLRTIYKPGYDFIKAGVILMDLS 358 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI-QQQWQMKRAMLSPR 410 + V Q+ L ++ ++QLM +D +N++ GRGT+ + G ++ W M + +P Sbjct: 359 TTTVQQIELDFGSSMSNKADQLMQAIDQINSQFGRGTIIYGSTGTGKKTWSMSQQRKTPS 418 Query: 411 YTTRSSDLLRV 421 YT + D+ Sbjct: 419 YTAKIRDIPIA 429 >UniRef50_C8X192 DNA-directed DNA polymerase n=2 Tax=Deltaproteobacteria RepID=C8X192_DESRD Length = 437 Score = 325 bits (832), Expect = 2e-87, Method: Composition-based stats. Identities = 178/423 (42%), Positives = 235/423 (55%), Gaps = 5/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D N FY SCE VF P L G+PVVVLSNNDGC+IAR+ EAK LG+ MG+P+ K++ Sbjct: 17 VYALVDCNNFYVSCERVFAPRLQGRPVVVLSNNDGCIIARSEEAKTLGIAMGEPFHKREP 76 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 RR GV FSSNY LY DMS RVM L +P EIYSIDE F DL Sbjct: 77 FLRREGVNVFSSNYPLYGDMSARVMEALSRFTPHQEIYSIDECFLGFVPAP-DADLLCTA 135 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R IR TV Q T + V VG+A TKTLAK+AN AKK V L + + ++ Sbjct: 136 RHIRETVRQWTGIPVSVGLAPTKTLAKIANRCAKKDPASKN-VCLLGDTTTIEQTLARTD 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+D+WGIGRR ++ L G+ T LDL ++R H VV +TV EL +PC LE Sbjct: 195 VEDIWGIGRRYARFLHTRGVDTGLDLVRMPRDWVRNHLTVVGLQTVLELDRQPCFVLETT 254 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I+CSRSFG RI D ++ +A+ + RAAE+LR++ + ++T+ F Sbjct: 255 PAPAKSIVCSRSFGRRIRDKQALGEALARHIQRAAERLRAKGLLAHTVRVALETNRFQP- 313 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y LL PT + + AA LD ++++G YQK GV L + Q +L Sbjct: 314 GPQYAARRCQTLLHPTDATPALHKAAQGLLDVLYRSGFAYQKIGVTLLELVPHNHRQASL 373 Query: 361 FDDNAPRP-GSEQLMTVMDTLNAKEGRGTLYFAGQGI-QQQWQMKRAMLSPRYTTRSSDL 418 F A LM +D LN GR T+ +A G+ QQW M++ +SPRYTT +L Sbjct: 374 FPPAAAETGRQRDLMRTVDHLNTVYGRDTVTWAASGLGPQQWHMRQNHVSPRYTTAWDEL 433 Query: 419 LRV 421 V Sbjct: 434 PCV 436 >UniRef50_C7LWM3 DNA-directed DNA polymerase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LWM3_DESBD Length = 412 Score = 323 bits (828), Expect = 7e-87, Method: Composition-based stats. Identities = 93/415 (22%), Positives = 165/415 (39%), Gaps = 20/415 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AF+ S E P L GKPVV+ + G A + EA+ G++ P + K Sbjct: 14 VILHLDMDAFFTSVEQADDPLLQGKPVVIGQSLRGVASAASYEARKYGIRSAMPIVQAKK 73 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L V Y ++S ++M+ + L P VE S+DEA+ D++G R + Sbjct: 74 LCPHA--VFLPGRMSRYREISVKIMNIMRALCPLVEQASVDEAYADISGTRRIFGPPENI 131 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R ++A +L T+LT VGIA K LAK+A+ K G + + L Sbjct: 132 ARRLKAEILAATNLTCSVGIAPNKFLAKIASDWNKP------GGLTFIPPADVPAFLRDL 185 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G++ ++L +G+ T+ + + + G + Sbjct: 186 PLGRIPGVGKQFQEELRRIGVTTIPHVLAHPRTYWNELMGKRGAFLHDRACGIDDSPVVP 245 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + + D + + + A R +LR + ++ IK F+ Sbjct: 246 GSDP-KSCSAENTLDRDTLDRTLLERWLLIQAERIGRELRGLGKKGLTVTLKIKFQDFS- 303 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S L PT + +I AA L A + G + +F Sbjct: 304 -----SITRSRTLARPTDITTEIFEAARMLLTAEKLP-RPVRLIGTGVSNFRFVQAELPL 357 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 + +A R S+QL MD + K G ++ A I++ + +LS + T Sbjct: 358 M--PDAGRKRSQQLDQAMDRIRDKFGNKSILRAEAAIRESDAVN-DLLSQKNRTS 409 >UniRef50_B4WV07 ImpB/MucB/SamB family n=6 Tax=Synechococcus sp. PCC 7335 RepID=B4WV07_9SYNE Length = 425 Score = 323 bits (828), Expect = 8e-87, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 271/427 (63%), Gaps = 10/427 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FALCD N FY SCE VFRP+L VLSNNDGC IAR+ + K LGV MG PW K + Sbjct: 3 IFALCDCNQFYVSCERVFRPELETHACGVLSNNDGCFIARSPQLKTLGVPMGGPWHKYRS 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + V FSSNY LY DMS RVM+ L +P +E+YSIDE F L G + DLTD+G Sbjct: 63 LCTQNNVAVFSSNYALYGDMSQRVMACLGTFTPDMEVYSIDEVFLQLDGFAHL-DLTDYG 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R+++ V Q T + +GVGI TKTLAK+AN+ AKK T GV +L + Q +++ + Sbjct: 122 RQMQRKVHQWTGIPIGVGIGPTKTLAKVANYVAKKR--TTSGVFNLCDRTLQDQVLPTIA 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+D+WGIGRR + KL+A+GIKT DL + R IR+ FNVV ER V ELRG CL LEE Sbjct: 180 VEDIWGIGRRWALKLNAIGIKTAADLRAAEPRTIRQVFNVVAERIVHELRGTACLGLEEI 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P + I+CSRSFG+ I++ + +AI +AARAA KLR + C + F++T+ F + Sbjct: 240 QPK-KNIMCSRSFGQMISEKHLLLEAIADHAARAAGKLRGQGSRCGGLQVFLQTNRFRKH 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E Y NS + P++DSR+II+AA + +++ G Y K GVML D Q NL Sbjct: 299 EAQYSNSCTWSFTVPSRDSREIIHAARACMAQLYRPGFEYHKCGVMLVDLAPATTVQGNL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ-----QQWQMKRAMLSPRYTTRS 415 F S++LM +MD+LNAK GRGT+ FA QG++ + W M++ SPRYTTR Sbjct: 359 FCSTDH-EQSDELMALMDSLNAKMGRGTVRFAAQGLEKGKQRKSWGMRQQWRSPRYTTRL 417 Query: 416 SDLLRVK 422 ++++V+ Sbjct: 418 KEIVKVR 424 >UniRef50_B2A8L2 DNA-directed DNA polymerase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A8L2_NATTJ Length = 408 Score = 323 bits (827), Expect = 8e-87, Method: Composition-based stats. Identities = 89/407 (21%), Positives = 169/407 (41%), Gaps = 27/407 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E P+L KPV++ + G V +A+ G+ P ++ + L Sbjct: 16 ILHIDMDAFYASVEKRDNPELEDKPVIIGGSRRGVVSTCCYKARKYGLHSAMPMYRAQRL 75 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFG 120 V + + Y +S + E +P VE S+DEAF D+TG N + Sbjct: 76 CPHG--VYLRPDMDKYRRVSQEIKKIFLEFTPLVEPLSLDEAFLDVTGSLNLFGDAVNIA 133 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +I+ + + LT +G+A K +AK+A+ K + +++ ++ LP Sbjct: 134 EKIQTQISDQLQLTCSIGVATNKFIAKVASDLKKPAG------LTHVPTGKEQDFLAPLP 187 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADT-----DIRFIRKHFNVVLERTVRELRGEPCL 235 VD +WG+G + + ++ + G T+ +L +I + K FN+ E T+ +G Sbjct: 188 VDKLWGVGEKTTARIKSRGYHTIGELQQMLAKAQNINSLAKSFNIT-EDTLLLAKGYDDR 246 Query: 236 QLEEFAPTKQEIICSRSFGERIT---DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 ++ P + I ++F + +T Y + + ++ + +LR + ++ I Sbjct: 247 EVVPEEPP-KSIGQEKTFAQDLTAGSQYNQLIPHLLKFSEQVGARLRKAGYKGKTVTVKI 305 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDFF 351 + S F + + T ++I A L + + + GV + + Sbjct: 306 RDSRF------KTWTKQKTVPE-TDQDKEIYAHAQELLQNMNLKPSDEIRLLGVTVSNLV 358 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 S QL+L N +QL +D + K G + A Q Sbjct: 359 SSTQQQLSLDMSNEQYEKEQQLQWTLDEMREKFGDDAIRRARLIFPQ 405 >UniRef50_C6XDV2 DNA-directed DNA polymerase n=2 Tax=Methylovorus sp. SIP3-4 RepID=C6XDV2_METSD Length = 430 Score = 323 bits (827), Expect = 9e-87, Method: Composition-based stats. Identities = 201/425 (47%), Positives = 269/425 (63%), Gaps = 7/425 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKAL-GVKMGDPWFKQK 59 +FAL D N+FYASCE VFRPDL GKPVVVLSNNDGCV+A++ EAKAL + M PWF+ + Sbjct: 10 VFALADANSFYASCEKVFRPDLEGKPVVVLSNNDGCVVAQSKEAKALLKLWMCRPWFEIE 69 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 + R GVV FSSNYELYA+MSNR M+TL + SPR E+YSIDE+F ++TG+ +LTD+ Sbjct: 70 EEALRLGVVPFSSNYELYANMSNRFMTTLRQFSPRQEVYSIDESFLEMTGINR--NLTDY 127 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL--SNLERQRKLMS 177 G+EI+ TV T L + VG +KTLAKLANH AKK Q Q GV DL + ++ Sbjct: 128 GQEIKRTVKDWTGLPICVGFGHSKTLAKLANHCAKK-QPQWEGVCDLTALSERELEAILE 186 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPVD VWG+GRR+ L +G++ VL L D + +R F VVLERTVREL GE +++ Sbjct: 187 QLPVDTVWGVGRRLQASLATVGVENVLRLKRADPKRVRDKFGVVLERTVRELNGEVLIEM 246 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 EE P ++++ SRSFG R+ + +AI +A+ A+++LRS+ Y + FI+ SPF Sbjct: 247 EEMVPEAKQVMSSRSFGARVHQLKDLEEAISYHASNASQRLRSKGLYANAVYIFIQNSPF 306 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 E YYG S +V L PT ++ I AA L I++ G YQKAGVML + Q Sbjct: 307 DKAE-YYGPSCTVALPCPTDNTLQINKAALWLLKRIYRPGIYYQKAGVMLMGLVPKEGQQ 365 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 L + P S+ LM +D +N K +G L A +G+ + W M+R SP YT + Sbjct: 366 QELLGYSEATPKSQALMETLDRINHKYSKGALKVASEGMAKLWAMRRNFKSPNYTGDWEE 425 Query: 418 LLRVK 422 L +VK Sbjct: 426 LGKVK 430 >UniRef50_B5JVF1 UmuC protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVF1_9GAMM Length = 420 Score = 323 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 171/422 (40%), Positives = 252/422 (59%), Gaps = 5/422 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M AL D N FYASCE VFRP L G+P+ VLSNNDGC+IAR+ E KALGV MG P F+ Sbjct: 1 MLALVDCNNFYASCERVFRPKLEGRPIAVLSNNDGCIIARSQETKALGVPMGAPLFQWLP 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + G FS+N+ LY D+SNRVM+ L++ PR+E+YSIDEAF DL+ + +L+DF Sbjct: 61 VLEENGAHIFSANFALYGDLSNRVMAVLKDECPRLEVYSIDEAFLDLS-MVPLCELSDFC 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R +R V + T + V +G+A +KTLAKLANH AKK G ++ MS+LP Sbjct: 120 RALREKVRRWTGVPVSIGVAPSKTLAKLANHVAKKHPSSDG---IWLMRGTEKNRMSSLP 176 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWG+GRR+ + + GI TV L + + + RK +V +ERTVRELRGE C ++ Sbjct: 177 VSEVWGVGRRLGARFEGFGINTVWQLRNAETAWARKVASVNMERTVRELRGERCFDIDST 236 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +Q+I+ SRSFG+ +T + A+ ++A RA EKLR + + I F T+PF + Sbjct: 237 EEPRQQILVSRSFGQMVTSKDELASALSNFAWRAGEKLRRQGARTQSIRLFAHTNPFRKD 296 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y ++ T + A + LD +++ G+ Y+KAGV+L + +G+ Q +L Sbjct: 297 MPRYCGRVRIQFHQATDSPPVLAKAVAQGLDQVYRHGYHYKKAGVVLDELLPRGIVQWSL 356 Query: 361 FD-DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 ++ + VMD +N K G G + A QG+ + W+M+++ SP +TT ++L Sbjct: 357 LSEESERCEKKSHIGGVMDAINDKMGTGKIRMASQGLGENWKMQQSRQSPSWTTDWANLK 416 Query: 420 RV 421 + Sbjct: 417 TI 418 >UniRef50_A5Y0S5 UmuC-like protein n=9 Tax=Proteobacteria RepID=A5Y0S5_ACIBA Length = 425 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 186/425 (43%), Positives = 245/425 (57%), Gaps = 10/425 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FY SCE VF+P L GKPV++LSNNDGC +AR+ EAKALG+KMG P FK ++L Sbjct: 5 IALIDGNNFYVSCERVFQPHLLGKPVIILSNNDGCAVARSEEAKALGIKMGAPLFKIREL 64 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + GV SSNY LY DMS RV+ + + SP EIYSIDE F DL+G + Sbjct: 65 VKEHGVKVLSSNYTLYGDMSRRVVDAVSQFSPHYEIYSIDENFVDLSGFGDRY--EAIAV 122 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 ++RATV Q T + VGIA+TKTLAKLAN AAKK GGV D + + +PV Sbjct: 123 DMRATVRQVTGIPNCVGIAETKTLAKLANFAAKKNPIF-GGVCDFTQPAVLAWCLDRIPV 181 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +VWGIGR+ KL + GI T L D R+ VVLERTV EL+G CL++E+ A Sbjct: 182 AEVWGIGRQTQIKLASQGIATAAQLRDMPRTLARQLGTVVLERTVAELQGIRCLEIEDIA 241 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 P ++ + +RS G + D ++ QA+ ++A+RAAEKLR I+ F T+ F+ N Sbjct: 242 PQRKGMAVTRSAGAPMRDLEAVMQALTAHASRAAEKLRLHGLVAGQITAFFHTNSFSKNA 301 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA-----GHRYQKAGVMLGDFFSQGVA 356 + S +VKL T ++ D++ A R A W G+ Y KAGVML D A Sbjct: 302 AQHSVSRTVKLKPMTNNTFDLVQAVNRCARAGWHPKAHEHGYSYTKAGVMLDDLLKAEDA 361 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSS 416 LFD P +LM MD +N + G+ + QG Q + + K M SPR+TTR S Sbjct: 362 PKMLFDIVQ--PRDARLMEAMDAINDRYGKRKVVIGAQGFQNKHEAKADMRSPRFTTRLS 419 Query: 417 DLLRV 421 DL + Sbjct: 420 DLPVI 424 >UniRef50_C8X3R0 DNA-directed DNA polymerase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3R0_DESRD Length = 397 Score = 322 bits (826), Expect = 1e-86, Method: Composition-based stats. Identities = 92/398 (23%), Positives = 161/398 (40%), Gaps = 17/398 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E P+L G+PV+V G V A + EA+ GV+ P + + L Sbjct: 5 ILHVDMDAFFASIEQQDYPELQGRPVIVGGGERGVVSAASYEARRFGVRSAMPISQARKL 64 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-DFG 120 ++ Y ++S +VM+ L+ SP VE SIDEA+ D+TG + G Sbjct: 65 CPNGN--FCHGRHKRYKELSRQVMTVLDGFSPCVEQASIDEAYLDITGTERLLGPPGEVG 122 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R ++ + RT L+ +GIA K +AK+A+ K G + E+ + + LP Sbjct: 123 RALQQAIRVRTGLSASIGIAPNKFVAKIASDWDKP------GGLTWIRAEQLQTFLDKLP 176 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V + G+G R S L+ +G+++V + F ++ G +++ + Sbjct: 177 VRKLPGVGPRTSALLERLGVESVGAVRRFSEAFWTDRLGEGGKQLWARAHGIDDSEVQPY 236 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + + D + + A R +LR E ++ I+ F Sbjct: 237 HAP-KSCGAEHTLPQDTEDEAILISWLLHEAERIGRELRREVMEAGTVTLKIRYDDFT-- 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + KL PTQ ++D+ +A L + G+ G+ G + L Sbjct: 294 ----TFTRCRKLSPPTQSTQDLYSAGVTLLRQQQLQ-RPVRLVGLSAGNLAPMGSGRRQL 348 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 A L MD + + G ++ A Q Sbjct: 349 SFFEADSARRNSLDAAMDAVRERFGGTSVRRAEILRAQ 386 >UniRef50_A6CAV0 DNA-damage-inducible protein P n=2 Tax=Planctomycetales RepID=A6CAV0_9PLAN Length = 388 Score = 320 bits (819), Expect = 9e-86, Method: Composition-based stats. Identities = 88/390 (22%), Positives = 163/390 (41%), Gaps = 20/390 (5%) Query: 7 VNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 ++AFYAS E P+L G+P++V + G V A N A+ GV P + L + Sbjct: 1 MDAFYASIEERDHPELQGQPIIVGGRAEHRGVVSAANYPARKFGVHSAMPMKTARQLCPQ 60 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFGREI 123 F YA++S + + +P VE S+DEAF D++G + + I Sbjct: 61 AH--FFPVRMSDYAEVSQSLQKIFRKYTPLVEPLSLDEAFLDVSGSQLLFGNGREIAASI 118 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 + V L VG+A K LAK+A+ A K + + ++ ++ + LPV Sbjct: 119 KQEVRHSLQLIASVGVAPNKFLAKIASDADKPDG------LVVVEPDKIQEFLDPLPVSR 172 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 VWGIG+ +++ + +GI+T+ + + + + + F +G + Sbjct: 173 VWGIGKMATQRFNRLGIQTISQVRVLEPKILTELFGEQGLHLWNLSQGLDERAVIPE-RQ 231 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 + I +F + D +R + + +LR + I I+ F+ Sbjct: 232 AKSISRETTFSSDVNDLEILRIILMDLVEDVSRRLRKNKLRGKTIQLKIRYDDFS----- 286 Query: 304 YGNSASVKLLTPTQDSRDIINAATRSL-DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 + S+ + PT +R+I +A L + + + GV + F S Q +LFD Sbjct: 287 -TFTRSITVSQPTDLTREIEQSALLMLDQKLPERPLSIRLIGVGVTGFQSGSQHQKSLFD 345 Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 + + +L V D + ++ G ++ Sbjct: 346 E-EDQQKFSRLDQVKDQIASRFGSNSIIRG 374 >UniRef50_Q15TC7 DNA-directed DNA polymerase n=25 Tax=Proteobacteria RepID=Q15TC7_PSEA6 Length = 421 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 175/425 (41%), Positives = 242/425 (56%), Gaps = 8/425 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGV-KMGDPWFKQK 59 MFALCD N+ YASCE VF P + KPVVVL+NNDGC+ A AK +GV K P+F+ K Sbjct: 1 MFALCDANSMYASCEKVFDPSIRNKPVVVLTNNDGCICAACGIAKRMGVGKKFVPYFQVK 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL--TGVRNCRDLT 117 GVV SSNYELYAD+S R+M T +P + +YSIDE F Sbjct: 61 KELEAAGVVIRSSNYELYADLSQRMMDTCARFAPDINVYSIDECFLYYGKDATAPQDGWN 120 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + IR TV + L + VGI T TLAK+ANHAAK GV L N + ++ ++ Sbjct: 121 NLANSIRKTVWREVRLPICVGIGPTPTLAKVANHAAK-NVSGFIGVAVLDNEDARKHVLK 179 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V DVWGIG+R+ KL+A+GI T +LA+ D IRK F++++E TVREL GE Sbjct: 180 QLAVTDVWGIGKRLGVKLNALGIHTAWELANRDPSHIRKAFSIIVENTVRELNGEIRHCW 239 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E K+EI +RSFG R+TDY +R A+ +A + KLR + ++ F SP Sbjct: 240 ETVRGAKKEIYSTRSFGSRVTDYDELRAALAGHAETVSVKLRKQKSVTSSMTLFATNSPH 299 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 N Y S + PT D+R+I++ ++ ++Q G Y K GV L D Q + Q Sbjct: 300 D-NGGYVRRSFFHRFTVPTNDTRNILHVIDSAMSQLFQPGVHYYKCGVGLMDLHEQDLYQ 358 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 +LF+ + LM MD +N++ GR T+ A +G +Q++ MKRA LSP+YTT+ D Sbjct: 359 YDLFNPSNDNSR---LMACMDNINSRYGRSTVQMAAKGFEQRFSMKRAFLSPQYTTQWRD 415 Query: 418 LLRVK 422 + ++K Sbjct: 416 IPKIK 420 >UniRef50_C7I5S1 DNA-directed DNA polymerase n=2 Tax=Proteobacteria RepID=C7I5S1_THIIN Length = 431 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 184/432 (42%), Positives = 243/432 (56%), Gaps = 14/432 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FYASCE VF+P+L GKP+VVLSNNDGC IAR+ EAKALGVKMG P F+ Sbjct: 1 MFALIDGNNFYASCECVFQPELRGKPLVVLSNNDGCAIARSDEAKALGVKMGQPIFEVPP 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 RR + S+N+ LY DMS RV++ L E +PRVE YSIDE+F DLTG+ F Sbjct: 61 AVRR-QLAIRSANFTLYGDMSARVLAILREAAPRVESYSIDESFLDLTGILKPGSREAFC 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK---------KWQRQTGGVVDLSNLER 171 RE+R V + T + VGI TKTLAKL NH AK + + + + Sbjct: 120 RELRERVHRWTGIPNCVGIGATKTLAKLGNHVAKSAVRKPGSYPAELGRVADLSALSPQG 179 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 +++A PV ++WG+GRR + KL +M I+T L L D I F VVL RT REL Sbjct: 180 LSAVLAATPVGELWGVGRRWAAKLRSMNIETALQLRDAPRALILDSFGVVLSRTQRELAS 239 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 EPCL LEE P +Q+I+ SRSFGER+ D+ S+ +A ++A RA EKLR+ + F Sbjct: 240 EPCLALEEVEPDRQQIMVSRSFGERVEDHQSIGEAFATFAMRACEKLRARGLVASAVGIF 299 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 T F + + L T DSR ++N + + G+ Y+KAGV L D Sbjct: 300 ANTDHFRPELHQHHPQRTTDLPRATSDSRVVLNTIRQMQRGFLKDGYAYKKAGVWLMDLS 359 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI--QQQWQMKRAMLSP 409 Q +LF ++LM +D +N + GRGT+ G + QW M++A LS Sbjct: 360 RPDQLQPDLFSTITIGD--DKLMQTLDAINRRYGRGTVGLGATGWRERPQWGMRQATLSS 417 Query: 410 RYTTRSSDLLRV 421 R+TT DL R Sbjct: 418 RFTTSLRDLPRA 429 >UniRef50_D0RPK3 Protein UmuC n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPK3_9RICK Length = 433 Score = 318 bits (814), Expect = 3e-85, Method: Composition-based stats. Identities = 168/420 (40%), Positives = 248/420 (59%), Gaps = 3/420 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N+FY SCE +F P + PVVVLSNNDGCVI+R+ EAK +G+KMG+P+FK K L Sbjct: 14 IALVDCNSFYVSCERLFNPRINNLPVVVLSNNDGCVISRSVEAKKIGIKMGEPYFKVKHL 73 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + V FSSNY LY D+S RVM L++ P +EIYSIDEAF DL+ + DL +F Sbjct: 74 IKSHKVQVFSSNYALYGDISRRVMHVLKKFCPTIEIYSIDEAFLDLS-LIKDEDLENFIS 132 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 E+R +L+ T + V +G+A+TKTL+K+ANH AKK + L++ + L+ P+ Sbjct: 133 ELRFIILKWTGIPVSIGVAKTKTLSKVANHIAKKEKI-GIKSFILNDEKEIDDLLKNFPI 191 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +D+WG+GR+ISK + IK+ DL D R+I+K+ NV+ +TV ELRG C+ E + Sbjct: 192 EDIWGVGRKISKLYKSNNIKSAYDLKDASNRWIKKNTNVLGLKTVMELRGINCIGFESNS 251 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++ SRSFG+++ DY ++++++ ++ AAEK+R + Q + + FI+ SPF +E Sbjct: 252 NPRKNCCVSRSFGKKVLDYDTLKESVVAHCLNAAEKIRVDRQVVKSVIVFIRNSPFDKSE 311 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 ++ S V L P+ DS + +SL I+ G RYQKAGV+ +G LF Sbjct: 312 KFFSRSKKVDLPIPSDDSILLTKICIQSLKEIFLKGPRYQKAGVIFSGLSRKGKYDEGLF 371 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 + S+ LM +D N K GR + A G W+M+R S T+ L + Sbjct: 372 S-YEKKEKSQSLMKAIDKTNFKFGRNMITVADTGFCNNWRMRRGHSSKIDTSSYDFLPTI 430 >UniRef50_A8ZS21 DNA-directed DNA polymerase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS21_DESOH Length = 384 Score = 317 bits (811), Expect = 6e-85, Method: Composition-based stats. Identities = 97/397 (24%), Positives = 159/397 (40%), Gaps = 20/397 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 M D++AF+AS E + P+ G+ VVV S+ G V A + EA+ GV P + Sbjct: 1 MILHVDMDAFFASVEQLDHPEWRGRAVVVGRSSGRGVVAAASYEARVFGVHSAMPMSRAL 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + E Y ++S RVM L+ +SP VE SIDEA+ D++G Sbjct: 61 KLCPDA--IVAPPRMERYKEVSARVMEILDAVSPLVEQVSIDEAYLDISGCERLHGTPET 118 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 G+ I+ V +T VG+A K LAK+A+ K + + E + + Sbjct: 119 IGKNIKKQVFDTLGITCSVGVAPIKFLAKIASDMNKPDG------LMVILPEAADRFIET 172 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV V G+G K+L MGI+T+ D+ + K R RG ++ Sbjct: 173 LPVHKVPGVGSVTKKQLALMGIETLGDVVRLPDGVLSKKLGKFGRRLKELSRGIDDSRVV 232 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + + + +R + A L+ + R + IK + F+ Sbjct: 233 P-WHPAKSVSEETTLSRDTAEKQELRHHLLRQAGDVCRHLQKLNARARVVFIKIKYADFS 291 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-FSQGVAQ 357 + L P Q S I A+ L+ A + GV + + + G Q Sbjct: 292 ------QTTRQTTLDAPVQSSDTIYRQASALLEKQTLAQK-VRLIGVGVTELVVTSGGVQ 344 Query: 358 LNLFD-DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 + LFD + EQ+ + ++ K G+ + Sbjct: 345 MELFDGEARRDSRWEQVDRSVSAISEKFGKTMVKRGS 381 >UniRef50_Q818U9 DNA polymerase IV n=137 Tax=Bacillaceae RepID=DPO4_BACCR Length = 415 Score = 316 bits (810), Expect = 9e-85, Method: Composition-based stats. Identities = 92/417 (22%), Positives = 170/417 (40%), Gaps = 22/417 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D+N F+AS E P L GKP+ V N G +I + EA+ G++ P ++ Sbjct: 14 VILHVDMNCFFASVEIAHDPSLQGKPLAVAGNEKERKGIIITCSYEAREYGIRTTMPLWE 73 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K L + +V N+ LY + S ++ L + +++ SIDE + D+T Sbjct: 74 AKRLCPQ--LVVRRPNFTLYREASFQMFQVLSRFTEKIQPVSIDEGYLDITDCYALGSPL 131 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + + I+ +L L +GIA LAK A+ K + + +++ Sbjct: 132 EIAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMKKPLG------ITVLRKRDIPEMIW 185 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V+ + GIG + ++KL+ + I T+ LA D IR + +G ++ Sbjct: 186 PLSVEAMHGIGEKTAEKLNEIHIHTIEQLAKGDEHIIRAKIGKHGIDLQKRAKGTDDREV 245 Query: 238 EEFAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + S +F + + + + + + +++L+ I IK Sbjct: 246 DPSQMGQHKSVGNSMTFSKDMDEEKELLDMLERLSKSVSKRLQKRTLVSYNIQIMIKYHD 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV- 355 + S +L + RDI AA+R W G + GV + + Sbjct: 306 ------RRTVTRSKQLKNAIWEERDIFQAASRLWKQHWD-GDSVRLLGVTATEIEWKTES 358 Query: 356 -AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 QL+LF E L+ V+D +N K G L Q +++Q + + L ++ Sbjct: 359 VKQLDLFS-FEEDAKKEPLLAVIDQINDKYGTPILQRGSQLLRKQEKSFQQKLENKF 414 >UniRef50_D0KZ56 DNA-directed DNA polymerase n=12 Tax=root RepID=D0KZ56_HALNC Length = 439 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 197/423 (46%), Positives = 269/423 (63%), Gaps = 5/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FY SCE VF P L +PVVVLSNNDGC +AR+AEAKALG+ MG PWF+ + Sbjct: 17 VFALVDGNNFYVSCERVFNPALEARPVVVLSNNDGCAVARSAEAKALGIAMGQPWFQIQS 76 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + + G++ SSNYELYADMSNR+M L + SPR E+YSIDE F DL G+ DLT Sbjct: 77 MAQSHGLIALSSNYELYADMSNRMMRILADFSPRQEVYSIDECFLDLRGMDV--DLTLLA 134 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG-GVVDLSNLERQRKLMSAL 179 +R V Q + VG+GI ++KTLAKLANH AKK + G + Q +LM+ + Sbjct: 135 HGMRQRVAQWIGIPVGIGIGESKTLAKLANHLAKKQPQWQGVCDLTTLEESAQDRLMACV 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V DVWG+GRR+ ++L+A GI T LDL D I++ F+VVL RTVREL+G CL LE Sbjct: 195 DVGDVWGVGRRLKEQLNARGIVTALDLKRADPVIIQRQFSVVLARTVRELQGISCLPLES 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q+II SRSFG+ + P +RQAI ++ +RAAEKLR++ + + FI+TSPF+ Sbjct: 255 MVAPRQQIIVSRSFGKPVWYLPELRQAITAHMSRAAEKLRTQASVAQMVQVFIRTSPFSA 314 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ-GVAQL 358 P+Y ++ L + D+R ++ A + L I++AG+ YQK GV+L D + A+ Sbjct: 315 -RPFYSQGITLPLAAASDDTRLLVKIAQQGLTRIYRAGYDYQKVGVLLMDIQPKGQGART 373 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 +LF D ++QLM +D++NA+ G+ TL AG+G Q W MKR +P YTT L Sbjct: 374 DLFHDAQHDRRTDQLMQTLDSINARMGKHTLKLAGEGFVQPWAMKRNRHTPAYTTNIRQL 433 Query: 419 LRV 421 R Sbjct: 434 ARA 436 >UniRef50_UPI0000E87FBE DNA repair protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FBE Length = 419 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 165/423 (39%), Positives = 237/423 (56%), Gaps = 8/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M AL DVN FY SCE +F P L KPVVVLSNNDGC+I+R+ EAK LG+KMG+P FK Sbjct: 1 MIALVDVNNFYVSCERLFNPYLINKPVVVLSNNDGCIISRSQEAKNLGIKMGEPLFKASA 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + R+ V SSNY LYAD+S RVMS L + + EIYSIDE F D+ G +L D Sbjct: 61 IIRQHQVQVLSSNYPLYADISARVMSLLSDFTSTQEIYSIDECFLDMEG---HENLQDIA 117 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR--KLMSA 178 R+I+ + + + V VGI TK LAKLAN AKK Q Q GV +SN +M Sbjct: 118 RKIKRLLWRYLRMPVCVGIGPTKVLAKLANRCAKK-QDQQSGVFIISNASASELNNMMDD 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L VD +WG+G+ ++ KL I ++LDL ++ ++RK F + +ER + EL G CL ++ Sbjct: 177 LSVDQIWGVGKALAVKLQKKSIYSILDLKQSNPTWVRKFFGINMERIIYELNGVSCLLID 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 K+ I CSRSFGE + DY + +A+ +++ RAA K RS++ ++ F+ T+PF Sbjct: 237 NQYVAKKGIRCSRSFGENVNDYIRLAEAVTTFSGRAALKARSQNTGTNAVTVFLSTNPFN 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 +Y ++ ++ L T + I+ AA L I++ Y K GV+L Sbjct: 297 KEHRHYQDAITMPLEQLTNQTNLIVKAALSGLRKIYKQKVTYSKCGVILNSLEELDKLSY 356 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 L L ++D +N K + +L+ A Q + W M+++ S Y+T S+L Sbjct: 357 PLISPI--HNRQANLTKIIDEINNKFDKNSLHIAFQPLYPSWDMRQSYRSQSYSTSWSEL 414 Query: 419 LRV 421 L V Sbjct: 415 LLV 417 >UniRef50_Q4FMY4 UmuC n=6 Tax=Bacteria RepID=Q4FMY4_PELUB Length = 426 Score = 315 bits (808), Expect = 1e-84, Method: Composition-based stats. Identities = 173/421 (41%), Positives = 252/421 (59%), Gaps = 6/421 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N+FY SCE +F P + KPVVVLSNNDGC+IAR+ EAK LG+KMG+P+FK K++ Sbjct: 10 IALVDCNSFYVSCERLFNPKIRNKPVVVLSNNDGCIIARSNEAKFLGIKMGEPYFKAKEI 69 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + V FSSNY LY D+S RVM TL+ +P +EIYS+DEAF DL+ + + D G+ Sbjct: 70 ILKNKVYVFSSNYSLYGDLSRRVMRTLKRFNPELEIYSVDEAFLDLSNYPDDE-VEDVGK 128 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 EIR+ +LQ T + +GIA+TKTL+K+ANH AKK + GV +L +E L+ + + Sbjct: 129 EIRSIILQWTGIPTSIGIAKTKTLSKIANHIAKK---KQSGVTNLIGIENIDPLLEKIDI 185 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +DVWG+G++++K GI L + +I+K NV+ RT ELRG PC+ LE Sbjct: 186 NDVWGVGKQMTKFYHQNGIYNAKQLKNMSNTWIKKSSNVLSSRTALELRGIPCIPLETKT 245 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++ + SRSFG R+ + + +A+ SY A+EK+RSE + I+ ++TSPF Sbjct: 246 SKRKSCVVSRSFGTRVEKFQELEEAVASYCLNASEKIRSESLIAKSITVSVRTSPFQNRG 305 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 YY N+ ++ T +S +I+ A +L+ I+ G+RYQKAG+ L S ++ NLF Sbjct: 306 VYYSNAKTIDFPIATNNSIEIVKTALIALNEIFINGYRYQKAGITLTGLVSSSGSK-NLF 364 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 + LM +D+ N K GR TL A G+ ++W M+R S T L + Sbjct: 365 S-TEKDEKIKGLMRSIDSTNYKYGRSTLSLASAGVNKKWNMRRDHSSKIDTANFHSLPII 423 Query: 422 K 422 K Sbjct: 424 K 424 >UniRef50_B2FJL0 Putative UV protection and mutation protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FJL0_STRMK Length = 429 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 178/429 (41%), Positives = 239/429 (55%), Gaps = 18/429 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FY S E F P L G+PV V S+ DGCVIAR+A +K LGV MG P + Sbjct: 11 IALQDGNNFYCSVEASFDPRLRGRPVCVASSGDGCVIARDALSKKLGVPMGAPIHQIPPN 70 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 R + S+N+ LY D+S R+ S L +L P +E YSIDE F DL G+ + D Sbjct: 71 VR-WQITFRSANFALYGDISTRIASILRDLFPAIEQYSIDENFIDLAGIPSK-DHERLAA 128 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 E RA +L+ T + VGI TKTLAKL+N AK GVV + + PV Sbjct: 129 EARARILKWTGIPSCVGIGPTKTLAKLSNKRAK---STVEGVVTTMPDDPA---LLTYPV 182 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +D WG+GR+++ +L A GI T DLA D+ +R + VV+ RT REL+G C LEE Sbjct: 183 EDDWGVGRKLTARLGADGILTAGDLAAADVDTLRSRYGVVMARTQRELQGISCADLEEHE 242 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++EI+ SR+FG+ IT + QAI ++A RA EKLRS + FI+T+PF N Sbjct: 243 AQRKEIMVSRTFGKDITSQTELMQAIATFAQRACEKLRSRQLQAAGVWVFIQTNPFKQNL 302 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 P Y S S +LL P+ D+R+I+ A A+++ G+ Y+KAGV L D V Q +LF Sbjct: 303 PQYNPSKSFRLLMPSADTREILMVAQGLAKAMFRPGYGYKKAGVSLLDLIHMDVQQGDLF 362 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA--------GQGIQQQWQMKRAMLSPRYTT 413 S+ +M VMD N K GRG++ FA + W +KR MLSP YTT Sbjct: 363 AGI--DQRSKAIMEVMDRTNQKFGRGSMGFAFTAWRPSGKTLEKPAWSVKRDMLSPAYTT 420 Query: 414 RSSDLLRVK 422 L+RV+ Sbjct: 421 DWKQLIRVR 429 >UniRef50_D0J481 DNA-directed DNA polymerase n=4 Tax=cellular organisms RepID=D0J481_COMTE Length = 432 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 185/435 (42%), Positives = 258/435 (59%), Gaps = 17/435 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE FRP L G PVVVLSNNDGC I+R+ EAKALGVKMG P+F+ +D Sbjct: 1 MFALIDGNNFYVSCERAFRPALQGIPVVVLSNNDGCAISRSDEAKALGVKMGQPFFQLRD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L G+VC S+N+ELY DMS+R+MS L P EIYSIDE+F + + RDLT Sbjct: 61 LVEHKGLVCLSANFELYGDMSDRMMSLAAGLGPTQEIYSIDESF--IGDLDGVRDLTRRA 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK---------KWQRQTGGVVDLSNLER 171 IRA +L+ T + VG+A TKTLAKL NH AK + Q + ++ Sbjct: 119 FAIRARILKWTGIPTCVGLAPTKTLAKLCNHVAKDSERKPGSYPAELQRVCNWAELSEQQ 178 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + ++ ++WG+GRRIS +L G+ T LDLA R ++VVLERTVREL+G Sbjct: 179 RTDILGRTAAGEIWGVGRRISVQLAEQGVLTALDLARLPAHAARDGWSVVLERTVRELQG 238 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 C+ LE K++I C+RSFG IT P + +A+ +A RAAEKLR+ + F Sbjct: 239 VSCMSLETAPAAKKQIACTRSFGHPITTLPPLIEAVSEFATRAAEKLRAGGLRAGALHVF 298 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + TSPF +Y +A ++L P+ D++ ++NAA L +I+Q G++ KAGVML D Sbjct: 299 VHTSPFRPGRRFY-ETAVIQLQPPSSDTKALVNAAVHGLRSIYQPGYQLSKAGVMLQDLC 357 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ----WQMKRAML 407 V Q +L P +LM MD +N + G+GT++ A G+ +Q W+M++ Sbjct: 358 PTEVQQGDLLFQ-EPCRDQSKLMEAMDKINKRFGKGTVHVASTGVPEQDESGWRMRQERR 416 Query: 408 SPRYTTRSSDLLRVK 422 +PRYTT+ ++ + Sbjct: 417 TPRYTTKIDEIPIAR 431 >UniRef50_D1R5W7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5W7_9CHLA Length = 421 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 159/421 (37%), Positives = 236/421 (56%), Gaps = 5/421 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F L D N FY SCE + P L KPV+VLS NDGCVI+R+ EAK LG+KMG+P+FK K+ Sbjct: 4 FVLADCNNFYVSCERMLHPKLEEKPVIVLSQNDGCVISRSQEAKQLGIKMGEPFFKVKEY 63 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 R V+ +SSNY+LY D+S RVM++L + +P ++IYSIDEAF + ++ Sbjct: 64 CERAKVIVYSSNYQLYGDISERVMNSLSQFAPEMQIYSIDEAFLKFPITLSDEEMFAECM 123 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 I+ + + + + +GIA TKTLAK+AN AK+ + GV L+ + ++ P+ Sbjct: 124 RIKKLIKKWVGIPISIGIAPTKTLAKVANSLAKQNRD--LGVFSLNEPLSREAILKEYPI 181 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +DVWGIGRR+SK+L +GI TV D F+RK VV ER + EL+G L LEE + Sbjct: 182 EDVWGIGRRLSKRLKGIGILTVWDFIQLTPYFVRKTMGVVGERMLLELQGISALDLEESS 241 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 P Q I SRSFG ++TD + +A+ ++ ++A KLR + QY + +++ Sbjct: 242 PK-QSITFSRSFGRKVTDISELGEALATFVSKACVKLRKQKQYAAALLVYLQFFSQDGES 300 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 + +PT D+ ++I A + L ++ +Y+K GV+L D S +LF Sbjct: 301 LQGNHMI-YSFPSPTDDTIEMIAATKQCLTKLYIDKKKYKKCGVILLDLKSAEQFMPDLF 359 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 P +Q+M MD LN + + T++ G GI Q W+ + SP TT L V Sbjct: 360 -QKGPDIKRQQVMRAMDKLNTRLKKRTVFLGGTGIHQDWKSRSDQRSPYNTTSWDHLPIV 418 Query: 422 K 422 K Sbjct: 419 K 419 >UniRef50_Q3AKE9 DNA-directed DNA polymerase n=7 Tax=Bacteria RepID=Q3AKE9_SYNSC Length = 424 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 176/422 (41%), Positives = 236/422 (55%), Gaps = 6/422 (1%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N FYASCE P L G+PVVVLSNNDGC++AR+AEA+ALG++MG P+FK + Sbjct: 6 ALIDGNNFYASCEQSLDPALIGQPVVVLSNNDGCIVARSAEARALGIRMGTPYFKARREL 65 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 R VV SSNY LYADMS R+MS LE +E+YSIDEAF + RN DL + R+ Sbjct: 66 ERHNVVVRSSNYALYADMSQRMMSLLEAHCEELEVYSIDEAFGRIRRPRN-GDLQGWARQ 124 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +RA Q L + +G+ +K AKLAN AK+ G+ DL + + + + ++ Sbjct: 125 LRARARQNLGLPIAIGLGASKAQAKLANRLAKQAPDH-AGMFDLGQCDNPDRWLETIAIE 183 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 DVWGIGR+++ GI L D +R VV R RELRG CL LE Sbjct: 184 DVWGIGRQLAHWCRLRGISNARHLRDMPSGELRAKCGVVGLRLQRELRGHACLPLELAPA 243 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 KQE SRSF IT + QAI +Y RAAEKLR + Q ++ + +TSPFA Sbjct: 244 PKQETCVSRSFSRPITSQEELHQAIATYVVRAAEKLRKQRQRAAALTIYTRTSPFAP--G 301 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 +Y +AS +L P+ D+ ++ AA + I++ + KAGV+ S + Q +L Sbjct: 302 FYSQAASTQLDLPSNDTAVLLQAARPLVARIFRPHRQLAKAGVLTQHLQSHNILQTHLMV 361 Query: 363 DN--APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 + E LM +D +N + GRGTL +AG G+Q W M+R LS TTR DL Sbjct: 362 PMSEEQQQKRECLMQTIDRINRRYGRGTLQWAGCGLQPSWLMRREQLSRAATTRLQDLPV 421 Query: 421 VK 422 VK Sbjct: 422 VK 423 >UniRef50_P58965 DNA polymerase IV n=29 Tax=Clostridia RepID=DPO4_THETN Length = 384 Score = 315 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 95/362 (26%), Positives = 163/362 (45%), Gaps = 19/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E P+ GKPV+V + G V + EA+ G+ P + K Sbjct: 5 IIHVDMDAFFASIEQQDNPEYRGKPVIVGGLSGRGVVSTCSYEARKYGIHSAMPMYMAKK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + + Y ++S ++ L +++P VE SIDEA+ D+T V + D Sbjct: 65 LCPQG--IFLPVRRKRYEEVSEQIFRILYDITPFVEPVSIDEAYLDVTHVDK--NPEDIA 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 EI+ V T LTV VGI+ K LAKLA+ K + + + +++ LP Sbjct: 121 LEIKKRVKDATGLTVSVGISYNKFLAKLASDWNKPDG------LMVITEDMVPEILKPLP 174 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V V GIG + ++KL ++GI+TV DL + + F +RG +E Sbjct: 175 VTKVHGIGEKSAEKLRSIGIETVEDLLKLPQENLIELFGKTGVEIYNRIRGIDERPVET- 233 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I ++ + + + Q + ++ +E+L E YCR ++ IKT+ FA++ Sbjct: 234 MREIKSIGKEKTLEKDTKNKELLIQHLKEFSEIVSEELIKERLYCRTVTVKIKTADFAVH 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S + + S DI A L+ W+ + G+ + + QL+ Sbjct: 294 ------TKSKTVDKYIRFSEDIYEVAKGILEE-WKLEQYVRLIGLSVSNLSPVKYEQLSF 346 Query: 361 FD 362 D Sbjct: 347 LD 348 >UniRef50_B3E0C4 Nucleotidyltransferase/DNA polymerase UmuC n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0C4_METI4 Length = 421 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 161/422 (38%), Positives = 238/422 (56%), Gaps = 9/422 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F L D + FY SCE +F P L GKPVVVLSNNDGC+++R+ EAK LG+ MG P+F+ K+ Sbjct: 7 FCLVDCDNFYVSCERLFNPGLEGKPVVVLSNNDGCIVSRSNEAKLLGIPMGAPFFRWKEF 66 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 F++ GVV SSNY LY D+S R+M LEE +P VEIYSIDEA+ DL+ F R Sbjct: 67 FKQQGVVALSSNYALYGDISGRLMQLLEESAPCVEIYSIDEAWIDLSAHP---SPESFAR 123 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 E+R + + T + V +GIA TKTLAK+A+ AKK G+ L E + + L V Sbjct: 124 ELREKIRRWTGIPVTLGIAPTKTLAKVASKIAKK-TTALKGMNLLFGEEEIDQALRTLEV 182 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 D++WGIG R++ KL GI +DL + D IR+ F+V+LERTV ELR C LEE Sbjct: 183 DELWGIGARLAAKLKERGISKAVDLKNADPFKIRRLFSVMLERTVWELRAISCFGLEENV 242 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++I+ S++FG+ + +R A + +A KLR +S F++ PF Sbjct: 243 SPPKQILSSQTFGQTLFSLDELRAATAHFVKESARKLRQFGLAAHQLSVFLRHGPF---- 298 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 P Y SAS + + P D ++ A L A+++ Y K+GV+L D Q Q + + Sbjct: 299 PGYIESASFRFMEPIGDVIGLLEKADSLLQALYKPQRAYTKSGVILFDLLPQSCHQASFW 358 Query: 362 DDNAPRPGS-EQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 + L +++ L ++G+ TL + + + W+++ +P YT+R ++ Sbjct: 359 PPEEEKERKYATLSHLLEELPKQKGKPTLRVGTELLGENWRLRFQRKTPSYTSRWEEIPA 418 Query: 421 VK 422 VK Sbjct: 419 VK 420 >UniRef50_A9W7Y3 DNA-directed DNA polymerase n=10 Tax=Rhizobiales RepID=A9W7Y3_METEP Length = 478 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 184/426 (43%), Positives = 233/426 (54%), Gaps = 10/426 (2%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N+FY SCE VF L PV+VLSNNDGC IAR EAKALG+KMGDP+FK + L Sbjct: 54 ALIDGNSFYCSCERVFDAKLARVPVIVLSNNDGCAIARTPEAKALGIKMGDPYFKIRGLC 113 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 GV FSSNY LY DMS R+ + + +P VEIYSIDE+F DLT RD R+ Sbjct: 114 EHQGVRVFSSNYTLYGDMSARINAIYRDATPDVEIYSIDESFLDLTAFVR-RDRVALARD 172 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 IRATV T + VGI TKTLAKLANH AK GV DL+ + L V Sbjct: 173 IRATVRAWTGIPTCVGIGPTKTLAKLANHIAKTVPE-LDGVCDLTEPAAYEHWLCRLHVG 231 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 ++WG+GR KL+AMGI TV DL D D R +RK VV ER + ELRG CL L+ Sbjct: 232 ELWGVGRASLPKLEAMGIDTVADLRDIDPRPVRKALTVVGERMIHELRGVSCLGLDLVPA 291 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 ++ +RSF R+T+ + QA+ ++A R EKLR E I+ F TS EP Sbjct: 292 RRKGCAVTRSFSGRVTERAELEQAVAAHAIRLGEKLRREGLGTDHITVFYHTSEHDRGEP 351 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ----AGHRYQKAGVMLGDFFSQGVAQL 358 S V L T D+ +I AA + W+ RY KAGV+ D +Q Sbjct: 352 MRSVSTVVTLPEATNDTLALIPAALHGMARTWREQGNPPWRYSKAGVVTVDLVPLAASQR 411 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG---IQQQWQMKRAMLSPRYTTRS 415 L R +++LM +D NA+ GRG++ A G ++ W K M +PRYTTR+ Sbjct: 412 ALIGRLD-RERADRLMGALDACNARFGRGSVVPARAGLAQQRRTWTTKFEMRTPRYTTRA 470 Query: 416 SDLLRV 421 +L Sbjct: 471 DELPVA 476 >UniRef50_C0WCT4 DNA-directed DNA polymerase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCT4_9FIRM Length = 397 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 95/398 (23%), Positives = 164/398 (41%), Gaps = 21/398 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + P+ +PV+V + G V + EA+ GV P + + Sbjct: 12 IMHVDMDAFFASVEQLDHPEYRNRPVIVGGLSGRGVVSTASYEARRFGVHSAMPMKEALE 71 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDF 119 + + Y Y ++S ++ E SP VE SIDEAF DLTG+ D+ Sbjct: 72 RCPKG--IFVEGRYGRYLELSQKIRQIFHEFSPLVEPLSIDEAFLDLTGMERLVGDIPAL 129 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G I+ + + T LT VG+A K LAKLA+ K + + ++ L Sbjct: 130 GLRIKERIKKETGLTASVGLAPNKFLAKLASDLKKPNG------LVIIRQSEAASRIAPL 183 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ ++GIG R + L GI+T+ DLA D F+ F E +R G + Sbjct: 184 PISRIFGIGARSASLLTRFGIRTIGDLAACDASFLSPLFGKNTETILRFAHGLDNRPVIP 243 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q + +F + + D+ + + + + + +LRS ++ +KT F + Sbjct: 244 -DEKRQSLGRELTFEKDLRDHAVILEILWNLSQEVGFRLRSAGLSGYTVTLKMKTQDFKV 302 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + S+ P Q +I+ + L + GV + Q ++ N Sbjct: 303 H------TRSLSSDLPLQLDEEIMERV-KILTRRNPLRDPVRLLGVTVSHLVPQESSEQN 355 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 LF + + Q +D L + G + I Sbjct: 356 LFSKSD---RNTQRSLAVDALKKRFGETIIKKGAPPIP 390 >UniRef50_C6XEM8 DNA-directed DNA polymerase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEM8_METSD Length = 425 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 184/423 (43%), Positives = 247/423 (58%), Gaps = 4/423 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL DVNA Y SC VF P L GK +VL+NNDGC ++RN AK LG+KMG+PWF+ K Sbjct: 5 IALVDVNAMYWSCHRVFNPSLEGKAGIVLTNNDGCAVSRNDLAKQLGIKMGEPWFQIKAN 64 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + VV FSS Y LYA MS R + L E SP EIYSIDE F DLTG+R G Sbjct: 65 PKYKDVVAFSSTYALYASMSKRFTNLLAEFSPHQEIYSIDECFLDLTGMR--GRQIQRGL 122 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV-VDLSNLERQRKLMSALP 180 IR + L V VGI TKTLAKLANH AKK+ G V ++ + + + L Sbjct: 123 NIRHRIKNEVGLPVCVGIGSTKTLAKLANHIAKKFPHFEGVVDLNEWEPHQMVAMFTMLD 182 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V VWG+GRR +++L A+ +K+V+DL D FIR+ F+VVLERTVREL GE CL LE Sbjct: 183 VGQVWGVGRRYAERLAALDMKSVMDLKLADPEFIRQQFSVVLERTVRELNGEACLDLEAV 242 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K++II SRSFG +I D P++ A+ S+ +RAAEKLR ++ Y IS ++T+ F + Sbjct: 243 REDKKQIISSRSFGRQIEDLPALVNAVSSFVSRAAEKLRLQNSYAGVISVEVETNRFNPD 302 Query: 301 EPYYGNSA-SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 ++L PT D+ + + A L I++ G RYQ+AG+ML + G Q++ Sbjct: 303 PYSKYGKRACIRLPAPTDDTLKLNHVAQWILKKIYKPGFRYQRAGIMLDEIVPAGGGQVD 362 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 LF + L V+D +N++ G+ + G W MK+ +LSP YTTR DL Sbjct: 363 LFGYQPAIGKRDNLSAVVDEINSRMGKNAVRVGTMGFSMDWDMKQDLLSPFYTTRIEDLP 422 Query: 420 RVK 422 + Sbjct: 423 VAR 425 >UniRef50_A5CQW8 DNA polymerase IV n=18 Tax=Actinobacteria (class) RepID=A5CQW8_CLAM3 Length = 430 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 109/410 (26%), Positives = 174/410 (42%), Gaps = 23/410 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+A+ E + RP+L G PV+V + G V + EA+ GV+ P + Sbjct: 23 ILHIDMDAFFAAVELLERPELRGTPVIVGGSSGRGVVTSATYEARRFGVRSAMPMAQALR 82 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L + V+ + E YA S VM +++P VE SIDEAF D+ G R + Sbjct: 83 LCPQATVI--GGHMEKYAHWSRVVMGIFRDVTPLVEPLSIDEAFLDVAGARGLFGSPAEI 140 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G IR V T LT VG A TK +AKLA+ K + + + AL Sbjct: 141 GAMIRRRVHAETGLTCSVGAASTKFVAKLASTRCKPDG------LLVIPAAETLPFLHAL 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 PV +WG+G+ + L G++TV D+ADT + ++ R G ++ Sbjct: 195 PVGALWGVGKTTEEALLRRGLRTVADIADTPLPALQSMLGESAGARLHDLSWGRDPRRVS 254 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F + +TD +R+ + A R AE+LR R +S ++ S F Sbjct: 255 T-HREEKSMGHENTFHDDVTDPEIVRRELLGQATRVAERLRRAGLTARTVSLKLRYSDFR 313 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S L PT +R I + + + + G R + GV + Sbjct: 314 ------TITRSRTLSEPTDVARRIYDEIRDVYEQVARPGDRIRLVGVRAEQLDDADNRAV 367 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 L+D G + +D + GRG + A + KRA +S Sbjct: 368 ALWDA---DEGWREAERTVDQAAQRFGRGAIGPASLLRKP--GAKRATVS 412 >UniRef50_C9KLE5 DNA polymerase IV n=2 Tax=Veillonellaceae RepID=C9KLE5_9FIRM Length = 395 Score = 313 bits (803), Expect = 6e-84, Method: Composition-based stats. Identities = 86/402 (21%), Positives = 165/402 (41%), Gaps = 24/402 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AF+AS E + KP++V + G V + EA+ GV P + + Sbjct: 6 LVMHVDMDAFFASIEQRDHEEYREKPLIVGGLSGRGVVSTCSYEARRFGVHSAMPIVRAR 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L + + +Y Y +S ++ + +P VE SIDEAF DLTG+ Sbjct: 66 RLCPQG--IFVEGDYANYKAVSQQIFAIFARYAPVVEPLSIDEAFLDLTGMELLMESPRA 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + +++A + ++T L VGIA K LAKLA+ K + + + ++ ++ Sbjct: 124 YAEKLKAEIREKTGLVASVGIAPNKFLAKLASDLEKPDG------LVIITEQTKQAVLDP 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE-RTVRELRGEPCLQL 237 LPV +WG+G++ + +L+A+ I+T+ L T + + F + + G + Sbjct: 178 LPVGRIWGVGQKTAARLEALRIRTIGQLRRTPRERLVRAFGAHMADHLLALASGIDTRPV 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + I +F I ++ + + + + + +LR R + ++ F Sbjct: 238 APR-EPAKSIGKEVTFPTDIESAEAVERVLLALSEKVGYRLRRHGCKGRTVQLKLRLGDF 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S L T R+I A A+ + G+ + F + G Sbjct: 297 R------TYTRSRTLAEATCYDREIYETALAFYRALGV-KQGIRLLGISVSGFDTSGAI- 348 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +LF + A E L +D + + G + A ++ Sbjct: 349 -SLFHEEA---RKENLYAAIDAIKKRFGEQGITKAQLLKKRD 386 >UniRef50_D0Z2K2 Error-prone repair protein UmuC n=5 Tax=Photobacterium RepID=D0Z2K2_LISDA Length = 430 Score = 313 bits (802), Expect = 7e-84, Method: Composition-based stats. Identities = 167/425 (39%), Positives = 239/425 (56%), Gaps = 6/425 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D FY SCE +F P L GKP+VVLSNNDGC +A + +AKALG+ G PWFK + Sbjct: 8 VWALVDAKNFYCSCEQLFDPSLVGKPLVVLSNNDGCCVAISQQAKALGIVRGVPWFKIQR 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + GV SSNY LYADMS R + L SP VE YSIDEAF L G +L D+G Sbjct: 68 EAIQQGVQVRSSNYTLYADMSRRFIEELSRFSPHVEQYSIDEAFIRLDGF-QLNELADYG 126 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 REIR T+L+ L V VGI T TLAKL NHAAK +++Q GV+ + R++ L+ P Sbjct: 127 REIRTTILKNIGLPVRVGIGATPTLAKLGNHAAKVYEKQVRGVIQIDTEHRRQWLLERTP 186 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + D+WGIG + + +L GI+ LA D IR+ +NV L RTV EL+ C+ + Sbjct: 187 IQDIWGIGAKTATRLRTAGIQNGWQLAQQDSIDIRRLWNVTLARTVLELQQISCISPGDV 246 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +++I+ SR+FG+ I + A+ + RA EKLR + + F++T+ Sbjct: 247 EEKRKQILSSRTFGQGINQLDELNAALAFHCQRAGEKLRKQQSQTGVVGVFLRTNKHKSL 306 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QGVAQL 358 P + SA + L++ TQD+ I+ A L+ I++ G+ Y K GV+L QL Sbjct: 307 -PQHHRSAVMPLISATQDTYRILEVAQALLNEIYRGGYEYYKVGVILEQLTDVTDDAIQL 365 Query: 359 NLFDDNAPRP-GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 ++FD +A +LM V D +NA+ + + A W M++A S R+TTR + Sbjct: 366 DMFDSSALYESKRRELMAVADRVNARY-KNGIKPASIISSTNWHMRQAHRSNRWTTRLDE 424 Query: 418 LLRVK 422 L + Sbjct: 425 LPIAR 429 >UniRef50_B9Z6P1 DNA-directed DNA polymerase n=2 Tax=Proteobacteria RepID=B9Z6P1_9NEIS Length = 435 Score = 313 bits (802), Expect = 8e-84, Method: Composition-based stats. Identities = 176/423 (41%), Positives = 246/423 (58%), Gaps = 7/423 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 FA D N FYA+CE VF P L G+PVVVLSNNDGCV++R+AEAK LGV MG P+F K Sbjct: 16 FAQVDCNNFYAACERVFNPALAGRPVVVLSNNDGCVVSRSAEAKRLGVPMGAPYFTLKGQ 75 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 R GV FSSNY LY D+SNR M L + E+YSIDE F DL+G + R Sbjct: 76 LERQGVAVFSSNYALYGDLSNRAMRLLAGYARAQEVYSIDECFLDLSG---EAEPLRLAR 132 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL--SNLERQRKLMSAL 179 +R +LQ L VG+ +KTLAKLANH AK+ + GV+DL + + + + Sbjct: 133 RLRDALLQGLGLPACVGLGPSKTLAKLANHLAKQ-EAALEGVLDLGSLDATALLQRLEPV 191 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V++VWGIGRR+ ++L GI + LA+T+ ++++ F +V R ELRG CL LE Sbjct: 192 AVEEVWGIGRRLGERLRLAGIGSARQLAETERDWLQRRFGLVTARIADELRGVSCLALES 251 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ ++ +RSFG ++T +++A +A+R AE+LR + F+ I+ S Sbjct: 252 LLEPRRSVMSTRSFGRKVTALAELQEAAAMHASRVAERLRRQGSLAHFLRVGIR-SGVPG 310 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 S +V LL P+ DSR + AA +++ +WQ G RY KAGVM + G Q + Sbjct: 311 WGRGGDASETVALLPPSNDSRVLARAAQQAVARLWQRGVRYHKAGVMAFELVDAGQVQAD 370 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 LF + S +LM MD +N + GRGT+ +G +Q W+MK+ LSP YTTR D+ Sbjct: 371 LFAGDPLDAKSARLMQAMDAINQRMGRGTVRLLAEGTKQPWRMKQDHLSPCYTTRWDDIP 430 Query: 420 RVK 422 VK Sbjct: 431 VVK 433 >UniRef50_C7H2N6 DNA polymerase IV n=8 Tax=Bacteria RepID=C7H2N6_9FIRM Length = 411 Score = 313 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 156/410 (38%), Gaps = 20/410 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + CD+N FYAS E + P+L KPV V + G V+A+N AKA GV G+ ++ Sbjct: 4 VILHCDMNNFYASVECMLNPELKNKPVAVCGSVEERHGIVLAKNYAAKAFGVSTGEAIWQ 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K + +V +YE Y S + ++E Y +DE + D+TG Sbjct: 64 AKQKCQD--LVIVEPHYEQYMKFSKLAREIYGRYTDQIEPYGMDECWLDVTGSGCMGTGF 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + EIR TV LT+ G++ K AKL + K + + R+ + Sbjct: 122 EIADEIRRTVKFELGLTISAGVSFNKIFAKLGSDMKKPDA------ITCIEADSFREKIW 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 P D+ G+GR K L + GI T+ +LA T F++ + G + Sbjct: 176 CHPASDLLGVGRATEKVLSSYGIHTIGELAATSDDFLKCRLGKNGLVIKKYANGLDDSPV 235 Query: 238 --EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ + I + + + + + + KLR+ + I+ I+ + Sbjct: 236 MRSDYVSPVKSIGHGITTMQDLENNAEVWCVMLELVQEIGTKLRAHKKKAGGIAISIRNN 295 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-FSQG 354 Y ++ PTQ + A +Q H + V + Sbjct: 296 ------ELYTKEWQCRIGIPTQSPTYLAKTAFALFAKNYQWEHPIRSVTVRAINLFEEDC 349 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 Q +LF D E+L ++ + + G+ + + + +R Sbjct: 350 PIQYDLFTDVKSLDRQERLDAAIEQIRFRFGKDAIKNGVLFQKSKMPTER 399 >UniRef50_Q7USY7 DNA polymerase IV n=1 Tax=Rhodopirellula baltica RepID=DPO4_RHOBA Length = 396 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 104/411 (25%), Positives = 169/411 (41%), Gaps = 22/411 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQK 59 M D++AFYAS E RP+L G+PVVV + G V A + EA+ G+ P + Sbjct: 1 MILHVDMDAFYASVEQRDRPELRGRPVVVGGSEGRGVVTAASYEAREYGIHSAMPGSRAI 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + YA + V +P V+ S+DEAF D++G + Sbjct: 61 KLCPHAD--FVRGRLDHYASVGRAVREIFHRFTPVVQPLSLDEAFLDVSGTIRLHGSPRE 118 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 G IR T+ + L VGIA K +AK+A+ K + R+ + Sbjct: 119 IGINIRETIRRELDLPASVGIAPLKFVAKIASDIGKPNG------FVEVPADGVREFLDP 172 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV +WG+G+ KL +G +T+ DL D+ ++ E G Q+ Sbjct: 173 LPVSRLWGVGKVGQTKLQRLGYRTIADLRVKDLDALKSQLGRWGEHLWNLANGIDRRQVV 232 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I R+F E ++D S+ + + + A +LR + I+ + F Sbjct: 233 -VDHLAKGIGHERTFAEDLSDIESLNAVVSYLSEQTARRLRRARRLASTITLKYRREDFQ 291 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDFFSQG-VA 356 S + KL TPT + +I+ A L + + + G+ LG Sbjct: 292 ------TFSRARKLSTPTDSTLEILQVAEELLLEMRSREPRSVRLLGISLGGLTDADAPK 345 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QL+LF + S ++ T+ D + K G+ +LY A QW ++ Sbjct: 346 QLHLFGEETGENASSKVDTLSDQIATKLGKHSLYRAS---SHQWVDRKNTK 393 >UniRef50_Q2YI99 Nucleotidyltransferase/DNA polymerase n=3 Tax=Bacteroidetes RepID=Q2YI99_9BACT Length = 431 Score = 310 bits (795), Expect = 5e-83, Method: Composition-based stats. Identities = 152/434 (35%), Positives = 234/434 (53%), Gaps = 15/434 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+ + D + Y SCE VFRPDL GKPVVVLSNNDGCV+AR+ EAK +G+K G P+F+ Sbjct: 1 MYGIIDCDNCYVSCERVFRPDLNGKPVVVLSNNDGCVVARSNEAKKMGIKAGTPYFQLAQ 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + + FSSNYELY +++ RV+ + + +P+ YSIDE F ++L G Sbjct: 61 QYPDAKIAVFSSNYELYGELTGRVVEIIRQEAPKYFRYSIDECFVYFNDF-EDKNLKSGG 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + + + V +G+A TKTLAK+A++ AKK+ + E+ K + P Sbjct: 120 ENLHKRIRKSVGMPVSIGLAPTKTLAKMASYFAKKYAGYRHC-CLIDTDEKWTKALKLFP 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 +++VWGIGRR + KL+A+G+ T D A ++R F+ +V+ RT +EL G + E Sbjct: 179 INEVWGIGRRYAAKLEALGVHTAYDFAQHHGDWVRATFHNIVIYRTWQELNGVDAVP-NE 237 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 K+ I SRSF +TD+ +++ + +YAAR AEKLR + ++ F+ T+ F Sbjct: 238 EMAKKKSICTSRSFNGMVTDFDTLKTHVSNYAARCAEKLRQQGTVASIVAVFLHTNLFRE 297 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + P Y N +L T + DI AA L +I+ G+ Y+KAGV++ QL+ Sbjct: 298 DLPQYWNFQEKRLTVGTNSTIDICKAANEVLQSIYVKGYHYKKAGVIVMGIGPNAPMQLD 357 Query: 360 LFD-DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW----------QMKRAMLS 408 LFD + ++L V+D +N G T+ Q Q+ +K S Sbjct: 358 LFDYNAEQFQKMKRLDAVIDRINKVNGTETIVLGSQQYTQKDGKGRAEVFANAIKHDYRS 417 Query: 409 PRYTTRSSDLLRVK 422 TTR SD++ +K Sbjct: 418 KNPTTRWSDIIHLK 431 >UniRef50_Q31B23 DNA-directed DNA polymerase n=7 Tax=Prochlorococcus marinus RepID=Q31B23_PROM9 Length = 428 Score = 310 bits (794), Expect = 6e-83, Method: Composition-based stats. Identities = 151/422 (35%), Positives = 228/422 (54%), Gaps = 6/422 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FYASCE P L KPVV+LSNNDGC+IAR+ EA+AL +KMG P+FK K+ Sbjct: 9 IALIDANNFYASCEQTINPHLRNKPVVILSNNDGCIIARSPEARALKIKMGTPYFKVKEK 68 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + V SSNY LY DMS R+M+ L++ ++EIYSIDEAF ++ N ++L + R Sbjct: 69 LNKLDVAVLSSNYSLYGDMSRRLMNLLKKYCEQIEIYSIDEAFVSISRP-NDKNLYPWAR 127 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 IR+ + Q +T+ VGI + K AK+AN AK + G+ DLS + + + V Sbjct: 128 NIRSLIYQNLGITLTVGIGENKVRAKIANKLAK-NIDYSAGIFDLSRTRNENNYLKRISV 186 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 D++WG+G++ S L + GIK +L D + I K +V +R EL+G CL LE+ Sbjct: 187 DNIWGVGKQTSNWLKSKGIKNARELRDMEENEIIKKLGIVGKRLQLELKGYKCLPLEKSK 246 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 +K+EI SRSFG IT + QA+ ++A +A+EK+RS++ I F +TS ++ Sbjct: 247 KSKKEIQVSRSFGTPITKLEDLTQALATHAIKASEKMRSQNLQSSDIRVFARTSKYSSQN 306 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL- 360 KL T D+ I+ I+ +++ KAGV++ D + Q ++ Sbjct: 307 YQRSAHR--KLTNATDDTNSILKIVVELSKEIYNPEYKFSKAGVLMQDLTNSEYLQQSVI 364 Query: 361 -FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 + S LM +D LN + + +A Q+ W+M + LS TT + Sbjct: 365 NYKSQKDLKKSATLMRTIDLLNKRFNNNAITWAITKTQKSWKMNKNFLSRSSTTDIEQIP 424 Query: 420 RV 421 + Sbjct: 425 TI 426 >UniRef50_B6BWB3 DNA-directed DNA polymerase n=1 Tax=beta proteobacterium KB13 RepID=B6BWB3_9PROT Length = 414 Score = 310 bits (794), Expect = 6e-83, Method: Composition-based stats. Identities = 165/422 (39%), Positives = 240/422 (56%), Gaps = 10/422 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M AL DVN FY SCE VF L PVVVLSNNDGC+I+R+ EAKALG+KMG P+F+ +D Sbjct: 1 MIALVDVNNFYVSCERVFNRSLEYVPVVVLSNNDGCIISRSNEAKALGIKMGMPFFQAQD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ V +SSNY LYADMSNRVM L LS EIYSIDE+F + N ++ G Sbjct: 61 LIKKNNVHVYSSNYPLYADMSNRVMQLLAHLSQDQEIYSIDESFLKI----NQKNYLLHG 116 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD-LSNLERQRKLMSAL 179 + IRAT+L+ L V VG A+TKTLAKLAN+ AKK+ G V SN + KLM + Sbjct: 117 QHIRATILKNVGLPVCVGFAKTKTLAKLANYMAKKYPMFNGVVCFSESNPKTLTKLMCEI 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V ++WG+G R+ K+L+ +GI TV DL + +++++ F++ +ER V EL C +E Sbjct: 177 SVGELWGVGVRLKKRLNELGILTVHDLKTANAKWMKQMFSINIERMVYELNDIQCYPIES 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P +++I+CSRSFG++I Y M A+ ++ RA+ KLR + + ++ F++ +PF+ Sbjct: 237 IKPDQKQIVCSRSFGQKINRYEDMADAVATFVQRASIKLRKQQLTAKQMTLFMRNNPFSS 296 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 T + ++ A L+ I+ G Y KAG++LGD N Sbjct: 297 KHRMQHVIRLQH-YDYTDSHQQLLRLAMHGLEKIYHQGIDYHKAGIILGDLR----RATN 351 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 L D + +P L +D + K + Q +W M++ S ++TT +LL Sbjct: 352 LNQDYSAKPEGHHLSNTIDAIRDKYHANIIMSGWQSKDGKWHMRQLNKSLKFTTSWLELL 411 Query: 420 RV 421 Sbjct: 412 EA 413 >UniRef50_D1PC12 UmuC protein n=2 Tax=Bacteria RepID=D1PC12_9BACT Length = 461 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 187/462 (40%), Positives = 252/462 (54%), Gaps = 43/462 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M L D N FY SCE VFRPDL GKPVVVLSNNDGCVIAR+ EAKALG KMGDP+++ K+ Sbjct: 1 MIGLADCNNFYCSCERVFRPDLTGKPVVVLSNNDGCVIARSEEAKALGYKMGDPFYQVKE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 GV FSSNY LY +SNRVMS L SPR++ YSIDE+F + + Sbjct: 61 KLEAEGVAIFSSNYTLYGSLSNRVMSMLSHYSPRIDQYSIDESFFEADESMAKVFFREHA 120 Query: 121 R---------------------------EIRATVLQRTHLTVGVGIAQTKTLAKLANHAA 153 +I A VL+ + + VGIA+TKTLAK+ + A Sbjct: 121 EDHPTLFNKMTIDELSEKPDSLLHRYGSKISADVLRAVGIPISVGIAETKTLAKIGSKFA 180 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF 213 KK++ G + ER+ K +S PV+DVWGIGR+I++KLD MGI+T AD + Sbjct: 181 KKYKGFQ-GCCLIDTDERRHKALSLFPVEDVWGIGRQIARKLDYMGIRTAAQFADKKESW 239 Query: 214 IRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG-ERITDYPSMRQAICSYAA 272 +R HFN+ RT +EL GE C+ +EE P K+ I SRSF E ITD + +A+ ++A Sbjct: 240 VRSHFNITTLRTWKELNGESCISIEE-LPQKKSICTSRSFANEGITDKNVIEEAVANFAV 298 Query: 273 RAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 R EKLR + C+ I+ F TS F + P Y S+ L T +I+ AA L A Sbjct: 299 RCTEKLRRQGSVCQGITVFAWTSRFNEHVPEYTIHDSLTLPIATNAQEEIVGAALSILRA 358 Query: 333 IWQAG------------HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + ++KAGV+L Q +LFD R ++LM +D + Sbjct: 359 KYPKPMADSRPDRSDMSFHFKKAGVILWQISPDHPRQQDLFDPID-RSKQKKLMEAIDAI 417 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 N K G GT+ A QG ++ +KR +S ++TT D+L+VK Sbjct: 418 NRKNGYGTIRQAIQGTDCRFDLKREYMSKQFTTNIHDILKVK 459 >UniRef50_Q19NE6 UV protection and repair protein n=9 Tax=Enterobacteriaceae RepID=Q19NE6_ECOK1 Length = 419 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 197/422 (46%), Positives = 269/422 (63%), Gaps = 4/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+ D+N YA+ E P L KP+++ SNND VIA N AK++G+K G P FK +D Sbjct: 1 MYMHVDINGAYAAFECAMDPKLSKKPLIIASNNDSSVIAMNKLAKSVGIKRGTPIFKCRD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ + SSN+ LY D SNR TLE +P+ YSIDE F L + D D+G Sbjct: 61 LIQQHRIEVRSSNFTLYEDYSNRFHETLESFAPQSSRYSIDENFMLLKNMNKIIDYEDYG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R IR+T+L LT GVG + TKTLAKL +A+K+W GGVV L++ R RKL+ + Sbjct: 121 RLIRSTLLHNLSLTCGVGCSSTKTLAKLCTYASKRWAAT-GGVVVLTDQARIRKLLGLIS 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++WGIG++IS++L A GI T D ++D+RF+RK F V +ERT REL GEPC +L E Sbjct: 180 TREIWGIGQKISERLSAFGIITAGDFYNSDVRFLRKSFGVEIERTWRELHGEPCFRLHES 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P +Q+II SRSFG+R+ + + +A+ + ARAAE+LR + + R I+ FI++S +A Sbjct: 240 PPVRQQIIVSRSFGQRLNEIGKLHEAVSFFTARAAEQLRKDGSWTRQITVFIQSSNYAQG 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E Y N L TQD+RD+++AA L+ I++ G Y KAGVML G QL+L Sbjct: 300 ENRYSNCGIEPLT-ATQDTRDLVDAAMTILNRIYKPGIAYAKAGVMLSAMTD-GTEQLSL 357 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 FD+ RPGS+ LM VMD KE RG L+ G+GIQQ ++MK+AMLSPRYTTR +LL Sbjct: 358 FDERPARPGSQALMKVMDRF-NKEKRGALFLLGEGIQQDFRMKQAMLSPRYTTRWDELLV 416 Query: 421 VK 422 VK Sbjct: 417 VK 418 >UniRef50_Q30X29 DNA-directed DNA polymerase n=8 Tax=Proteobacteria RepID=Q30X29_DESDG Length = 492 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 182/441 (41%), Positives = 247/441 (56%), Gaps = 20/441 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D N+FY SCE VFRPDL +PVVVLSNNDGC+IAR+AEAKALG+ MG PWFK + Sbjct: 53 LYALVDCNSFYVSCERVFRPDLVRRPVVVLSNNDGCIIARSAEAKALGIPMGAPWFKVRR 112 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTD 118 GV FSSNY LY DMS+RVM LE P V +YSIDEAF L + Sbjct: 113 HAESAGVTVFSSNYALYGDMSSRVMRVLERFCPDVHVYSIDEAFMRLDSLIMPPGMSPER 172 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK----------KWQRQTGGVVD--- 165 + +R V +RT + V VG+ TKTLAKLAN +K + GV + Sbjct: 173 YAACLRREVYRRTGIPVSVGLGCTKTLAKLANRLSKQQNAGARAMVPAAFRYAGVFNFGA 232 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 +++ + L+ L V DVWG+G R + +L GI+T L D +R++ +V T Sbjct: 233 VTDPDVMDALLETLDVTDVWGVGARHAGRLRTWGIRTARALRDAPDDRVRRYMSVTGLHT 292 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 V ELRG CL L++ P+++ ++ SRSFG +T M +A+ +Y RAAEKLR E Sbjct: 293 VLELRGISCLPLDDAPPSRRSVVSSRSFGTLVTHKEHMLEAVTAYMTRAAEKLRREQLEA 352 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 + I T + P Y +SA V+L PT + +I A L++IW+ G+RYQKAGV Sbjct: 353 HCVGVMISTPRH-GDGPRYADSAQVQLAVPTSHTPQLIVRARALLESIWRDGYRYQKAGV 411 Query: 346 MLGDFFSQGVAQLNLFDDNAPR----PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 ML S Q+++ +LM D +NA+ GRGTL +A G+ + W Sbjct: 412 MLSGLESAVSRQVSMLPALQGTGRGLERGRRLMAAADAVNARFGRGTLEYAAAGLGRPWS 471 Query: 402 MKRAMLSPRYTTRSSDLLRVK 422 MK+ LSPRYT+ L V+ Sbjct: 472 MKQEHLSPRYTSDWKKLPLVR 492 >UniRef50_B2I3H3 Nucleotidyltransferase/DNA polymerase n=12 Tax=Acinetobacter RepID=B2I3H3_ACIBC Length = 442 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 146/424 (34%), Positives = 225/424 (53%), Gaps = 4/424 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D+N Y SCE +F P L KPVVVLSNNDGCV++R+ EAK LG+KMG PWF+ + Sbjct: 9 VYALVDINNCYVSCERLFNPKLNDKPVVVLSNNDGCVVSRSEEAKLLGIKMGVPWFQIEK 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCRDLTD 118 + GV +SSNY LYA+MS R + L E +E YSIDE F LT D++D Sbjct: 69 DALQAGVQVYSSNYTLYAEMSRRFFAVLGEFFSPDDLEAYSIDECFIHLTPYLQSIDISD 128 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL-SNLERQRKLMS 177 + ++R+T+L+ L +GI +KT AKLANH AKK + G + + LM Sbjct: 129 YCNKVRSTLLKWLGLPCCIGIGYSKTQAKLANHYAKKIKSFKGVCNFITLDPLIMEDLMQ 188 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 V +VWGIG ++ K+L + + T LDL + + K F+VV+ RT+REL+G+ C+QL Sbjct: 189 QTSVKEVWGIGYQLVKQLQSYEVYTCLDLTFANEHHMAKAFSVVMARTIRELKGQSCIQL 248 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ A + I+ SRSF + ++ ++QA+ + RA +L + Q C + + Sbjct: 249 DDPAIPTKRILASRSFAQALSSIEIIKQALIFHLNRAHRRLMKQEQLCACVQVML-YEKT 307 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 S ++ L T D + AA + +D +++ Y K GV+ ++ Sbjct: 308 DKPPYKKATSQAIGLHYATDDLCILTKAAMQQIDVLYKENKSYIKIGVLFCALHARQQHI 367 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 +L+ +QLM + T+ + G L WQMK+ S Y TR ++ Sbjct: 368 DDLWQPLELIHQRQQLMETLGTVRKRFGSHYLQVGYHSRNPSWQMKQCHRSKNYLTRWNE 427 Query: 418 LLRV 421 +L + Sbjct: 428 MLTI 431 >UniRef50_B8DIF6 DNA-directed DNA polymerase n=6 Tax=Desulfovibrio RepID=B8DIF6_DESVM Length = 481 Score = 307 bits (785), Expect = 6e-82, Method: Composition-based stats. Identities = 98/361 (27%), Positives = 154/361 (42%), Gaps = 18/361 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E + P L GKPV V ++ G V A + EA+ GV+ P L Sbjct: 6 IMHIDMDAFFASVEQMDDPSLRGKPVAVGGSHRGVVSAASYEARRFGVRSALPMSTALRL 65 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDFG 120 ++ YA++S+R+M L E SP VE S+DEA+ D TG+ + G Sbjct: 66 CPH--LIVVPGRMRRYAEISHRIMDALREFSPLVEPASVDEAYLDATGLERLFGPVENMG 123 Query: 121 REIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++A VL T LT VG A K LAK+A+ K + + E + + L Sbjct: 124 MAVKARVLDVTGGLTCSVGAAPVKFLAKIASDVNKPNG------LFILYPEDVAEFLRTL 177 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + G+G+R L+ +G++ D+ F + F G ++E Sbjct: 178 PVGRIPGVGKRSLDALEQLGVRFAGDVLRYSREFWERRFGKGGVHLHERASGVDPREVEP 237 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + +F E D +R+ + + A R LR + R I+ +K + F Sbjct: 238 YSEP-KSESAENTFSEDTADRAVLRRWLLAQAERVGASLRRQRLAGRTITLKVKYADFR- 295 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 S S L PT + I + A R LDA+ A + GV + +F Sbjct: 296 -----SISRSHSLPEPTASTETIFDEACRLLDALTLADK-VRLIGVGVSNFGPAHHGPRQ 349 Query: 360 L 360 L Sbjct: 350 L 350 >UniRef50_Q67QM6 DNA polymerase IV n=1 Tax=Symbiobacterium thermophilum RepID=DPO4_SYMTH Length = 361 Score = 307 bits (785), Expect = 8e-82, Method: Composition-based stats. Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 19/363 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+AS E P L GKPV+V + + G V + EA+ GV+ P + Sbjct: 7 VIHLDMDAFFASIEQRDNPRLRGKPVIVGGSPNSRGVVSTCSYEARRFGVRSAMPSREAL 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L + V N+ YA + +V + + + +E SIDEAF D++G +D Sbjct: 67 RLCPQA--VFIRPNHAKYAAVGRQVRAIMRRFTDVIEPLSIDEAFLDVSG----QDAVRV 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 RE++ + HLT G++ K LAKLA+ K + + ER ++L+ L Sbjct: 121 ARELKEAIRAELHLTGSAGVSYCKFLAKLASDMQKPDG------LTVITWERAQELLPTL 174 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G + L A+GI T DL D +RKHF + + RG + Sbjct: 175 PVRKLWGVGPASEQALHALGIYTCGDLLAYDPDTLRKHFGKRADELILLARGIDPRPVVP 234 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + I +F TD + + + YA AE+LR + Y R ++ IK + F Sbjct: 235 Y-REAKSIGEENTFPVDQTDREYLSRLLERYADNLAEELRRQGLYARTVTVKIKWNVFVE 293 Query: 300 NEP----YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 P + + S L PT D+R I A + G + + G+ + + QG Sbjct: 294 GGPKGGDFLQITRSQTLPMPTNDARTIGRVAREIFARVEWEGRKVRLLGLSVHNLVKQGE 353 Query: 356 AQL 358 Sbjct: 354 QVQ 356 >UniRef50_C0YV48 Probable RumB/ImpB like DNA repair protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YV48_9FLAO Length = 423 Score = 306 bits (784), Expect = 9e-82, Method: Composition-based stats. Identities = 145/411 (35%), Positives = 229/411 (55%), Gaps = 5/411 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL D N F+ SCE PDL G+PVVVLSNNDGCV++R+ EAK LG+ M P FK K+ Sbjct: 1 MYALVDCNNFFVSCERTLDPDLEGRPVVVLSNNDGCVVSRSKEAKDLGIPMAAPAFKYKE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 LF++ V FS+ +ELY S +V++ + E+YSIDE F DLTG + D+ ++ Sbjct: 61 LFQKHDVKSFSAKFELYNYKSQQVINIAKSYVLDHEVYSIDELFLDLTGFK-YIDIYEYC 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +I+ + + + V +GIA TKTL K+AN K++ GV L E+ K + L Sbjct: 120 LKIKEEIKDKESIPVSIGIAPTKTLCKVANRIVKEFPENFNGVYILDTPEKIEKALKWLN 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + DVWGIGRR++ K++ G+ DL ++RK + R + EL+G L+L+ Sbjct: 180 IGDVWGIGRRLAAKMNDSGVYKAWDLLQKPEMWVRKIMGIHGVRMINELKGIRQLELD-A 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I +RSF + +T+ +R+ + ++ +E+LR ++ C+ I+ F++T+ F + Sbjct: 239 PSPKKSIAVTRSFMQMLTNKEEVRERVETFGMYCSERLRKQNTCCKMITVFVQTNRFRKD 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y N+ + L PT S I +AI++ G Y++AGVM+ DF + Q++L Sbjct: 299 LPEYKNAMTRILSNPTNSSILIGRVVNELFEAIYREGFHYKRAGVMVNDFVPEDQRQISL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 F++ + +M MD +N K G+ + + RA LSP Y Sbjct: 359 FEE-DIQNQHLPVMKAMDAMNRKFGKDKVRLGSMSGDNTFG--RAKLSPEY 406 >UniRef50_D1C0B2 DNA-directed DNA polymerase n=2 Tax=Actinomycetales RepID=D1C0B2_XYLCX Length = 430 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 105/406 (25%), Positives = 164/406 (40%), Gaps = 20/406 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+A CE RP+L G PV+V G V+A EA+ GV+ P L Sbjct: 23 IMHVDMDAFFALCELARRPELRGLPVIVGGRGRGVVLAATYEARVFGVRSAMPMVSAMRL 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-FG 120 + V ++ Y D+S VM+T+ E++P VE SIDEAF D++G R G Sbjct: 83 CPQA--VIVPPDHRRYTDVSRSVMATMAEITPIVEQISIDEAFLDVSGARRRLGPPTVIG 140 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +RA V +T VGIA+ K LAKLA+ AK L E + LP Sbjct: 141 ARLRAHVQAVHGVTCSVGIAKNKFLAKLASTHAKPDGM------LLVPDEASVPFLRTLP 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 V +WG+G + L GI +V LADTD+R ++ V G + Sbjct: 195 VGALWGVGEKTEAVLARWGITSVAQLADTDVRTLQAAVGVVHGAHLHDLAWGRDPRPVVP 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I +FG D ++ + + A + R + R ++ ++T+ F Sbjct: 255 TERE-RSIGNETTFGSDQHDLAAVEARLLELCDKVAARCREQGVVTRTVALKVRTNDFR- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S L PT +RD+ A L A+ G + GV + + Sbjct: 313 -----TLTRSRTLDGPTDVARDLYRVARELLAAVDLRGLPVRLVGVRAENLQERAGTAQQ 367 Query: 360 L---FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 L + + +D + + G ++ G+ Q Sbjct: 368 LTLDEAASERPQAHREAELALDAVRERFGTRSIGLGAGGVASARQR 413 >UniRef50_A5GPY7 Bacterial UmuC protein homolog (SOS-regulated protein) n=14 Tax=Cyanobacteria RepID=A5GPY7_SYNR3 Length = 426 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 174/421 (41%), Positives = 248/421 (58%), Gaps = 6/421 (1%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N FYASCE +F P L G+PVVVLSNNDGC++AR+ EA+ LG+ MG P+F+ D Sbjct: 6 ALIDCNNFYASCEQLFDPALQGRPVVVLSNNDGCIVARSREARQLGIAMGTPYFQVADRL 65 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 R VV SSNY LY DMS RVM+ L++ P +E+YSIDEAF L + +L+ + E Sbjct: 66 RDQQVVVRSSNYALYGDMSQRVMALLKQRVPELEVYSIDEAFARLPALPA-HELSSWAAE 124 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +R V Q+ L + +G+A +K LAKLAN AK+ GV +L + ++ + V+ Sbjct: 125 LRVLVRQQLGLPIALGMAPSKVLAKLANRLAKRDP-ARTGVCNLLLEPQLPDRLAEVAVE 183 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 D+WG+GRR+++ G+ T LDLA D IR+ + VV R +ELRG CL LE Sbjct: 184 DLWGVGRRLARWCRLRGLATALDLAQADSALIRQGWGVVGLRLQQELRGISCLALESEPA 243 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 KQE SRSFG + D S+R+A+ ++ R AEKLR + Q ++ F++TSPFA Sbjct: 244 AKQETCVSRSFGTAVLDRLSLREAVAAHVVRGAEKLRRQGQRASRLTVFVRTSPFAA--G 301 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF- 361 +Y NS SV L T D+ ++ A +D +++ G+ +QKAGV+LG Q Q +L Sbjct: 302 FYANSISVSLPLATADTAVLLQRALPLVDQLFRHGYAFQKAGVLLGQLQPQEHLQHHLLV 361 Query: 362 -DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 +L+ +D LN + G GT+ +A G++ W M+R LS +TT +DL Sbjct: 362 PCSPQQLRRRSRLLQAVDGLNQRFGTGTVQWAAVGVEPDWCMRRQHLSAHFTTSKADLPM 421 Query: 421 V 421 V Sbjct: 422 V 422 >UniRef50_C0QJE1 DinP n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJE1_DESAH Length = 384 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 93/397 (23%), Positives = 160/397 (40%), Gaps = 20/397 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 M D++AF+A+ E P+ G+P+VV N+ V + EA+ G+ P F Sbjct: 1 MILHMDMDAFFAAIEQRDHPETAGRPLVVGGNSKRSVVATASYEARRFGIHSAMPMFMAL 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TD 118 D ++ + YA +S ++M+ L E +P VE SIDEAF D+TG Sbjct: 61 DKCSH--LIVIPPDKSKYAAVSGQIMTLLNEFTPLVEQVSIDEAFLDITGCERLFGSVEK 118 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+ + Q T LT +G + K LAK+A+ K + +++ Sbjct: 119 ICVAIKDRIKQETGLTCSIGASHLKFLAKIASDMNKPDGIH------IIKRTDTPEVIQT 172 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + V G+G R ++ +GI T+ D++ + K F + RG + Sbjct: 173 LAIKKVPGVGERAMDQMKQLGIITLGDISRIPHPILEKKFGKFATDLLNFSRGIDPSIIG 232 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 P + I + D M++ + ++A R +LR+++ I+ +K S F Sbjct: 233 TSGPI-KSISSESTLENDTLDMVVMKKHLLAHAQRVGRQLRAKNLLATNITIKLKFSDFT 291 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-FSQGVAQ 357 + KL+ P S I A + + + GV + F Q Sbjct: 292 ------QITRQTKLMVPICASTAIYREACTLFEQTAKTRK-IRLLGVGVSSFSTPDAPVQ 344 Query: 358 LNLFDD-NAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 L LFD+ + L +D ++ + G T+ A Sbjct: 345 LELFDNIDQKDRRWAVLDRAVDRISHRFGAKTITSAS 381 >UniRef50_A5FU54 UMUC domain protein DNA-repair protein n=2 Tax=Acetobacteraceae RepID=A5FU54_ACICJ Length = 418 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 189/420 (45%), Positives = 235/420 (55%), Gaps = 8/420 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F L D N+FY S E F P+L +P+VVLSNNDGC IAR EAKALG+KMG+PW + Sbjct: 4 FGLIDGNSFYCSAEQAFAPELRSRPLVVLSNNDGCAIARTPEAKALGIKMGEPWHLFRKR 63 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 V SSNY LY DMS RV L E P+VE YSIDE F DL G+ DL F R Sbjct: 64 PESRAVEWRSSNYALYGDMSRRVYDVLTERVPQVEPYSIDEMFLDLDGIP---DLDRFCR 120 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 ++R V Q + VGI TKT+AKLAN AKK + GGV DL + E + + LP+ Sbjct: 121 DLRRDVRQIAKIPTCVGIGPTKTIAKLANKIAKK-ETALGGVCDLRDPELRARHYERLPI 179 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +VWGIG ++ KL A GI T+ D D R +R V R ELRG CL L A Sbjct: 180 AEVWGIGGQVGAKLAAAGITTIADFVRADPRAVRDMLTVTGARVQTELRGASCLPLSLMA 239 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 PT++ I SRSFG I +R+AIC++AARAAEKLR+E I+ F T+P + Sbjct: 240 PTRKGIAVSRSFGHMIDRPAELREAICTFAARAAEKLRAEGLEAGQITVFTHTNPHNGD- 298 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 P+Y K+ PT D+ +I A R L A+W G+RY KAGVML D Q LF Sbjct: 299 PWYSAQRQGKI-EPTADTGLLIGEAIRLLRAVWHPGYRYFKAGVMLQDLAP-ARRQAVLF 356 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 S M MD +NA+ GRGTL A W +R LSPRYTT++ ++L Sbjct: 357 ASFDRDQ-SAAAMKAMDAINARFGRGTLRIASTATSPSWGARRQNLSPRYTTQAGEMLVA 415 >UniRef50_C9LNT4 ATP-NAD kinase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LNT4_9FIRM Length = 403 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 93/393 (23%), Positives = 162/393 (41%), Gaps = 21/393 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P+ GKPV+V + G V + EA+A GV P K ++ Sbjct: 5 IMHVDMDAFYASVEQRDHPEWRGKPVIVGGSSRRGVVATASYEARAFGVHSAMPAVKARE 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-DF 119 L V +++Y +SN + + + +E S+DEAF D++G+ + Sbjct: 65 LCPDA--VFVLPRFDVYKSVSNEIHEIMLHYAVEIEPLSLDEAFMDISGLCGKYETLGAV 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 GR I+A + ++T L GIA K LAKLA+ K + + +++++++ L Sbjct: 123 GRAIKAEIKEKTGLVASAGIAPNKFLAKLASDLDKPDG------LRIIPYGKEKEILAPL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G +KL G T+ D+ + R G +E Sbjct: 177 PVRRLWGVGHVTERKLRNAGFLTIGDIQKAPFAKLASVLGNQASLIQRLSFGIDDRAVEA 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I ++ + +T+ + + I ++ A++LR R IS ++ + F Sbjct: 237 SRRI-KSIGDESTYEKDLTESADIDRQIAIHSDVVAKRLRRHKLAGRTISLKVRFASFR- 294 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S+ L T +I AA I+ + GV + + ++ Sbjct: 295 -----TVTRSLSLEEGTDLQEEIYAAALELKKRIY-MNEGVRLIGVTASNLAP-PLETVD 347 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 LF R + VMD + K G L Sbjct: 348 LFS--TMREKQVKAAAVMDAIQEKFGEHALRKG 378 >UniRef50_A4CII2 DNA polymerase IV n=20 Tax=cellular organisms RepID=A4CII2_9FLAO Length = 366 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 161/372 (43%), Gaps = 18/372 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E +P+L G+P+ V G V A + EA+ GV+ + + Sbjct: 10 IIHIDMDAFFASVEQRDQPELRGRPIAVGGGAKRGVVAAASYEARTFGVRSAMSGVQARR 69 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDF 119 L +V ++ Y ++S ++ E + VE S+DEA+ D+T R T Sbjct: 70 LCPE--LVFVKPRFDRYREVSRQIRGIFLEYTDLVEPLSLDEAYLDVTANRKGMPSATLI 127 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 REIR +L+ T LT GI+ K +AK+A+ K ++T E ++ + +L Sbjct: 128 AREIRRRILEETGLTASAGISVNKFIAKVASDFNKPNGQKT------VPPEDVQEFLESL 181 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + G+G+ ++K++A+GI T DL F+ HF R +RG ++ Sbjct: 182 EIRKFHGVGKVTAEKMNALGIFTGADLRRQSEHFLTGHFGKSGHHYYRVVRGVHDSPVQP 241 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + R+F E ++ M + + A + +LR+ ++ + I+ I+ S F+L Sbjct: 242 SRVP-KSLGAERTFSENLSSEVFMVEKLTKIAEELSRRLRTRNRSGKTITLKIRYSDFSL 300 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S L I+ AA L + G+ L + ++ + Sbjct: 301 ------QTRSRTLAEYIDSPERILAAARDLLYQQPLEN-SVRLLGISLSNLDTEKEKTES 353 Query: 360 LFDDNAPRPGSE 371 D + + E Sbjct: 354 GEDSVSVQLKFE 365 >UniRef50_D1VXB9 Putative DNA polymerase V subunit UmuC n=1 Tax=Prevotella timonensis CRIS 5C-B1 RepID=D1VXB9_9BACT Length = 440 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 166/432 (38%), Positives = 248/432 (57%), Gaps = 14/432 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 +A+CD ++ Y SCE VFRPDL KPVVVLSNNDGCV+AR+ EAK +G+ G P+++ K+ Sbjct: 12 YAICDCDSCYVSCERVFRPDLKHKPVVVLSNNDGCVVARSKEAKRMGIPAGMPYYQLKEQ 71 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + + FSSNYELY +++ RVM + E SP+ YSIDE FC L + + DL +G Sbjct: 72 YHDNEIAVFSSNYELYGELTARVMQLIREASPQSVRYSIDECFCVLPDM-SFTDLKQWGE 130 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 + +L+ T + + +GIA TKTLAK+A+H AKK++ + E++ K + P+ Sbjct: 131 SLCHRILKYTGMPISIGIAHTKTLAKMASHYAKKYEGYQHC-CIIDTDEKRTKALQQYPI 189 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +VWGIGRR + KL++MGI++ D A D +IR F VV RT +EL GE C+ ++E Sbjct: 190 SEVWGIGRRHATKLESMGIRSAYDFAMHDKSWIRSLFTVVGMRTWQELWGEDCVPIDEMT 249 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 + I SRSF + +Y ++R I ++AAR A KLR + +S F+ T+ F + Sbjct: 250 HK-KSICTSRSFTGMLAEYDAVRTHIANFAARCAYKLRQQQSVASVVSVFVHTNRFREDL 308 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 Y NS SV+LLTP+ ++ I+ AA + L I+ +G++Y+KAGV++ S Q N Sbjct: 309 DQYWNSTSVQLLTPSNSTQVIVQAAAQGLQHIFASGYQYKKAGVVVMGLQSDAAIQTNFL 368 Query: 362 D-DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ----------QWQMKRAMLSPR 410 D +L V+D LN G T+ Q +Q ++ S Sbjct: 369 DFHATQMEKHIKLDQVVDRLNKLMGTETVKLGAQQYKQKQQNGKAIVFADAIQHVFKSKN 428 Query: 411 YTTRSSDLLRVK 422 TTR SD++ +K Sbjct: 429 PTTRWSDIMELK 440 >UniRef50_A3DH61 DNA polymerase IV n=9 Tax=Clostridiales RepID=DPO4_CLOTH Length = 399 Score = 303 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 95/405 (23%), Positives = 160/405 (39%), Gaps = 21/405 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + CD+N FYAS E ++ P+L KPV V + G V+A+N AK VK G+ ++ Sbjct: 4 VILHCDLNNFYASVECLYHPELRDKPVAVCGSIEDRHGIVLAKNYAAKKYKVKTGETVWE 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDL 116 K+ G+V +N+ LY S E + RVE + +DE + D++ D Sbjct: 64 AKNKCP--GLVVVKANHSLYYKFSKYARQIYEYYTDRVESFGLDECWLDVSESTLLFGDG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 T EIR + + +TV VG++ K AKL + K V + ++ + Sbjct: 122 TKIANEIRERIKRELGVTVSVGVSYNKVFAKLGSDMKKPDA------VTVITENDFKEKI 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV+ + +G KKL+ M + T+ DLA+ F+ + G Sbjct: 176 WGLPVEALLYVGDSTKKKLNNMAVFTIGDLANCHSEFLVRQLGKWGYTLWSFANGYDTSP 235 Query: 237 L--EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + I S + +T+ +R I + E+LRS + R + IK Sbjct: 236 VAKNDCEIPIKSIGNSLTAPRDLTNNEDVRILIYVLSESVGERLRSHNLKGRTVQISIK- 294 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + L T + +I A W + GV + D Sbjct: 295 -----DPELQTLERQAGLDIHTSITSEIAQKAYEIFLKSWNWSKNVRALGVRVTDLVESD 349 Query: 355 -VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 Q++LF D+ R E L +D + + G ++ + Sbjct: 350 TCTQISLFSDDIKRQKLEILDECVDRVRERFGYYSVRRGILLQDR 394 >UniRef50_Q2KZS3 DNA polymerase IV n=2 Tax=Proteobacteria RepID=Q2KZS3_BORA1 Length = 360 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 154/366 (42%), Gaps = 21/366 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E RP+L G+PVVV V A + EA+ GV + + Sbjct: 8 IVHIDMDAFYASVEQRDRPELRGQPVVVAWTGARSVVCAASYEARRFGVHSAMAVSRAQR 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L V ++ Y +S +V + +E S+DEA+ D+T T Sbjct: 68 LCPDA--VYVPPDFNRYRAVSRQVREIFSRHTDLIEPLSLDEAYLDVTVNKLGLPSATAV 125 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IRA + + T LT G+A K LAK+A+ K + + + + + L Sbjct: 126 AEAIRAQIQRETGLTASAGVAPNKFLAKIASDWNKPDG------LFVLRPAKVLEFLQPL 179 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV V G+GR +L+++GI TV DLA + HF R RG +++ Sbjct: 180 PVRKVPGVGRVTQARLESLGIHTVGDLATCAPAELEHHFGRHGLRLHELARGLDEREVQP 239 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 Q++ +F + + +A+ AAR E+ R + Q R +KT F L Sbjct: 240 -DQPLQQVSAENTFERDLR-LADLGEALDRLAARVWEQARKKGQLGRTAVLKLKTDRFRL 297 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDFFS--QGVA 356 + S+ L P + ++ A R + H RY+ AGV + +F Q Sbjct: 298 ------LTRSLTLSQPPSSAEELAAIARRLCARVDLPAHTRYRLAGVGMSNFTDPAQSAR 351 Query: 357 QLNLFD 362 Q +LF Sbjct: 352 QPDLFG 357 >UniRef50_P54560 DNA polymerase IV 2 n=8 Tax=Bacillales RepID=DPO42_BACSU Length = 412 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 102/414 (24%), Positives = 171/414 (41%), Gaps = 20/414 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + L D+ +FYAS E P L +PV+V + G V+A AK GV ++ Sbjct: 6 VIFLVDMQSFYASVEKAENPHLKNRPVIVSGDPEKRGGVVLAACPLAKQKGVVNASRLWE 65 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 ++ V + Y D+S ++ + LEE + VE YSIDE F D+TG + Sbjct: 66 AQEKCPEA--VVLRPRMQRYIDVSLQITAILEEYTDLVEPYSIDEQFMDITGSQKLFGTP 123 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH-AAKKWQRQTGGVVDLSNLERQRKL 175 + + I+ +++ + VGI K LAK+A AKK + G+ L+ E + Sbjct: 124 MEIAKSIQGRIMREIGVYARVGIGPNKALAKIACDNFAKKNKN---GIFTLTK-ENMKTE 179 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 M LPV ++G+G R+ L+ MGI T+ LA + ++K + + G Sbjct: 180 MWPLPVGSMFGVGSRMKHHLNRMGISTIGGLAAFPLDLLKKKWGINGHVLWMTANGIDYS 239 Query: 236 QLEEFA-PTKQEIICSRSFGERITDYP-SMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + + ++ I + + ++ + + + R+ + +S + Sbjct: 240 PVSTSSLDGQKAIGHGMTLPRDYEHFDKEIKVVLLELSEEVCRRSRNAGVMGQTVSVSCR 299 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 + F G + VKL PT ++D+ A R W G ++ GV L S Sbjct: 300 GADFD---WPTGFNRQVKLAEPTNSTQDVYEAVRRLFLTFWD-GKPVRRLGVNLSQLSSD 355 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + QLNLF D A L VMD + + G + A +RA Sbjct: 356 DIWQLNLFQDYA---KKMSLGYVMDGIKNRFGDTAIIRAASLTAAGQAFERAAK 406 >UniRef50_C9LBG3 DNA polymerase IV n=6 Tax=Clostridiales RepID=C9LBG3_RUMHA Length = 426 Score = 302 bits (774), Expect = 1e-80, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 173/410 (42%), Gaps = 26/410 (6%) Query: 1 MFALCDVNAFYASCETVFRPD------LWGKPVVVLSN---NDGCVIARNAEAKALGVKM 51 + DVN+ + S E V+R + L P V + G ++A++ AKA GVK Sbjct: 7 VIFHIDVNSAFLSWEAVYRLEQGGTVDLREIPCAVGGDKTKRRGIILAKSLSAKACGVKT 66 Query: 52 GDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR 111 G+P + ++ S+++ +Y S + ++ L E SP VE YSIDEAF D+TG+ Sbjct: 67 GEPLTEALKKCPS--LIVVSAHHSMYRQYSQKFLNILREYSPSVEQYSIDEAFMDMTGME 124 Query: 112 NC-RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + F +++ + + TV +GI+ K LAK+A+ K + T Sbjct: 125 KLIGNPVAFAHKLKNRISKELGFTVNIGISGNKYLAKMASDFEKPDKVHT------LFPT 178 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 + M LPV D+ +GR ++ L +GI T+ DLA+TD+ ++ H E Sbjct: 179 EIKTKMWPLPVSDLLFVGRATTQVLKKLGIYTIGDLANTDVEILKCHLKKQGESIWNFAN 238 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G +E + + S + +TD + + + S A +LR + +S Sbjct: 239 GRDTSLVESESQGNKGYGNSTTIAFDVTDEGTAKMVLLSLCETVAARLRKDDVKAEVVSV 298 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 ++ F S + PT + +I + D +W G + GV Sbjct: 299 SVR--DFE----MKTVSHQRVMAAPTNITGEIYDTVCVLFDELWD-GMPIRHLGVHTSRV 351 Query: 351 FSQG-VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + Q++LFD N E++ +D + K G + A ++ Sbjct: 352 SKEERGRQMSLFDLNTNYEKMEKMDMAVDKIRKKFGNNAIMRASFLDNKK 401 >UniRef50_A4ECH9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECH9_9ACTN Length = 417 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 107/402 (26%), Positives = 179/402 (44%), Gaps = 24/402 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 L D++AF+AS E + P+ GKP++V + + G V + EA+ GV P + + Sbjct: 26 VGLMDLDAFFASVEMLDHPEWRGKPLIVGGDADSRGVVSTCSYEARRFGVHSAMPSAEAR 85 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L + + +++ Y ++S +VM+ L + +PRVE SIDEAF D+T G D Sbjct: 86 RLCPQA--IWTHGHFDRYREVSAQVMAILADETPRVERVSIDEAFIDITPGRFAPEDPLQ 143 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R I V +T +G+ KT+AK+A+ K + + + +++ ++A Sbjct: 144 VARRISDRV-AALGVTCSIGVGCNKTVAKIASERDKPFG------LTIVRPGTEQRFLAA 196 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + GIGR ++L M I T+ +L+ + F V ER + G ++ Sbjct: 197 LPVSAMSGIGRSAEERLRRMRIYTLGELSRAPESTLASIFGVNGERMRQRALGLEISEVT 256 Query: 239 --EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + R+F + +T+ + AI +LR + ++ +K S Sbjct: 257 SLDEEREVKSVSNERTFAKDLTERGDIEAAIALLGESVGRRLRRQGLTGATVTLKLKYSY 316 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + +A +L PT D + A LD IWQ G + AGV + DF QG Sbjct: 317 GSGR------TAQRRLPHPTDDENIFVAVALELLDKIWQKGMHVRLAGVGMSDFDHQGGI 370 Query: 357 QLNLFDDNAPR----PGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 Q +LF + R L +D + K G L F Q Sbjct: 371 QTDLFCEIDGRGAQSSDRRDLSVAIDAVRDKFGDTALSFGRQ 412 >UniRef50_A6WU94 DNA-directed DNA polymerase n=28 Tax=Gammaproteobacteria RepID=A6WU94_SHEB8 Length = 418 Score = 302 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 178/423 (42%), Positives = 250/423 (59%), Gaps = 7/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N+FY S E VFRPD GKP++VLSNNDGC++A N +AK GV P+F+ KD Sbjct: 1 MFALVDANSFYCSAEQVFRPDWRGKPMIVLSNNDGCIVAANKQAKERGVPKFAPYFQVKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L + GV+ SSNYELYAD+S ++M+ + +P +YSIDE+F + L Sbjct: 61 LCTKLGVIVCSSNYELYADLSAKMMNIIGRFAPEQHVYSIDESFLSFKNSYPAIKCLQAQ 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G+ IR V + T L V VGI T TLAK ANHAAKK GV + N + + ++ ++ Sbjct: 121 GQLIRKAVWKETRLPVCVGIGSTLTLAKAANHAAKKLPGYQ-GVCAIDNEQDRISILQSM 179 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V+DVWGIGRRISKKL+ M ++T DLA RK F++ +ERTVREL G+ C +E Sbjct: 180 SVNDVWGIGRRISKKLELMNVRTAYDLAKIPAGLARKQFSIEIERTVRELNGQACKVWDE 239 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 K++I +RS GERIT+Y + QA+ + A AA K R + C+ + F SP+ Sbjct: 240 ARADKKQIFSTRSVGERITEYEDLLQALSKHVAIAAAKARKQGSSCKTMLLFASNSPYDE 299 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + V T S ++I T++ +++AG RY K GV L D S QL+ Sbjct: 300 RPTGFKT--LVHFACATDCSIELIQGMTQAASQLFRAGVRYYKVGVGLIDLVSTQHGQLD 357 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 LF+ + +P LM +D +N + G TL+ A QGI+Q+W M+R +L+P+YTT+ L Sbjct: 358 LFNVSKAKP---ALMKTLDGINQRYGTDTLFIAAQGIEQKWAMRRDLLTPQYTTKWKCLP 414 Query: 420 RVK 422 +K Sbjct: 415 EIK 417 >UniRef50_B0PEH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PEH3_9FIRM Length = 415 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 85/403 (21%), Positives = 157/403 (38%), Gaps = 20/403 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D +AFYAS E ++ P L G+PV V+ + G V+A++ EAK GV+ GD ++ Sbjct: 8 ILHVDCDAFYASVECLYNPALRGRPVAVVGDPELRHGIVLAKSQEAKLFGVQTGDALWQA 67 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 + + + +++E Y S E S R E + +DE++ DLTG Sbjct: 68 RQKCKE--ITFVPAHFEKYLSFSRMTKEIFSEYSDRCESFGLDESWIDLTGCTELFGDGP 125 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +IR + + +T VG++ K AKL + K + + ++ + Sbjct: 126 AVATQIRRRIKEELGITASVGVSFNKVFAKLGSDLNKPDGM------TVIAYDGFKEQVW 179 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV + +GR + KL + GI T+ LA I F+ F + G + Sbjct: 180 PLPVKTLLYVGRATTGKLKSYGITTIGALAQAPITFLEHRFGKIGRMLWMFANGLDTSPV 239 Query: 238 EEFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + I S + + ++ + + + +LR C+ ++ I+ S Sbjct: 240 SNIGAKSLIKSIGNSTTAPRDLITDQEIKITLYALCESISARLREHSFRCKTVALTIRDS 299 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + L P+ ++++ +AA + G + GV + Sbjct: 300 SLT------SFERQLALKRPSCITQELFDAAFSLYKQHHKCGLPVRSLGVRAANLMLIDC 353 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 QL++F D A E+L +D + + G + Sbjct: 354 MQLSIFPDVARAQKQERLEETVDDIRRRFGHFAVQRGVMLTDP 396 >UniRef50_C6NU08 Error-prone repair protein UmuC n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NU08_9GAMM Length = 424 Score = 301 bits (770), Expect = 4e-80, Method: Composition-based stats. Identities = 159/424 (37%), Positives = 244/424 (57%), Gaps = 11/424 (2%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N FY SCE +F+P L GKPVVVLSNNDGC +AR+ EAKALGV MG P+F+ + L Sbjct: 4 ALVDANNFYVSCERLFQPRLEGKPVVVLSNNDGCAVARSNEAKALGVTMGAPYFQWEKLA 63 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 ++ G+V SSNY LY ++S R+M L + EIYSIDE+F ++ + + + Sbjct: 64 KQHGIVVLSSNYALYGELSARLMRLLGNQAVGQEIYSIDESFLEV--PVADAEADSWAQH 121 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL--SNLERQRKLMSALP 180 +R + ++ L V VG+A TKTLAK+ NH AKK +R GV + +++R+ P Sbjct: 122 LRQQIRRQLGLPVCVGVAPTKTLAKVCNHWAKK-ERTAEGVCIWGDLDPQQRRQWFHETP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V D+WG+GRR++ +L+A G+++ DLA TD R++R+H+ V L R +ELRG PCL LEE Sbjct: 181 VGDLWGVGRRLAARLEAQGVQSAGDLARTDSRWLRQHYGVALARMQQELRGVPCLSLEEV 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +P +Q+I CSRSFG +T++ + +++ + R EKL + + + +++SPF Sbjct: 241 SPPRQQIQCSRSFGRAVTEFSDVLESLSLHTQRGIEKLHEQALWAGSVQVMVRSSPFRE- 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 +Y +A +L P++D R + A + +Q G YQK+G++L D + +L Sbjct: 300 -GFYSGTAHRRLPEPSRDYRVLWEAVRSAAAEAFQPGVSYQKSGILLFDLQA-QARTGDL 357 Query: 361 FDDNA-PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ--QWQMKRAMLSPRYTTRSSD 417 F +E+L + + G+ TL G++Q W M+ SP Y + Sbjct: 358 FAVQEGGEERAERLQEALQRAQDRFGKHTLARGVGGLRQGRDWAMRSDRRSPSYLSDWWS 417 Query: 418 LLRV 421 L Sbjct: 418 LPVA 421 >UniRef50_Q1IRF1 DNA-directed DNA polymerase n=2 Tax=Acidobacteria RepID=Q1IRF1_ACIBL Length = 425 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 91/405 (22%), Positives = 156/405 (38%), Gaps = 23/405 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AF+ S E +F P L GK VVV + G V A + A+ GV P Sbjct: 17 VIFHVDMDAFFVSVEELFDPSLKGKAVVVGGHRDERGVVSAASYAARKFGVHSAMPLRTA 76 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-T 117 L + + + E Y + S + L++ SP+VE+ SIDEA+ D+TG Sbjct: 77 AKLCPDA--IFVNGHPERYREYSGKAFEVLKKFSPKVEMASIDEAYLDMTGTERLHGPPL 134 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + + T L +GI ++ +AK+ + AK GV+ + ++ ++ Sbjct: 135 KAAHALHQFMKSETKLNCSIGIGTSRLIAKVCSDQAKPN-----GVLYIV-PGQEASFLA 188 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC--- 234 L V + G+G+ +KL+ +GIK V DLA D F+R+ F + RG Sbjct: 189 PLSVRKIPGVGKVFEQKLNEIGIKKVGDLAKLDDAFLRERFGEWGLALAGKSRGLDAGGY 248 Query: 235 -LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + + I +F D + I + ++R + R + ++ Sbjct: 249 FDRDVAVDEGPKSISHEHTFNTDTRDQEKLEAMIARLSEMVCRRVREHELHARTVQIKLR 308 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 S F + + L PTQ + A WQ G + GV + F Sbjct: 309 YSDFT------TITRAHSLEQPTQLDTVVAETARTLFRDNWQRGRTIRLIGVHVAGFDDV 362 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 L + ++V+D + K G + A + Sbjct: 363 PQQLDLL--TQTHDDKVSKALSVVDRMRDKFGENAVSLATGLKSR 405 >UniRef50_C4L3M4 DNA-directed DNA polymerase n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L3M4_EXISA Length = 363 Score = 300 bits (769), Expect = 6e-80, Method: Composition-based stats. Identities = 87/376 (23%), Positives = 152/376 (40%), Gaps = 21/376 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AFYAS E RP+L GKPV+V ++ G V + EA+ GV + Sbjct: 4 LIIHVDMDAFYASVEQRDRPNLRGKPVIVGGPPHSRGVVATCSYEARKYGVHSAMSSRRA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLT 117 L ++ Y +S +VM + ++P VE S+DEA+ D+T Sbjct: 64 FALCPHAT--FVKPRFQAYRQVSAQVMEIFKSVTPLVEPLSLDEAYLDVTENSLLSTSGP 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 R I + +RT LT G+A +K +AK+A+ K + + L+ ++ Sbjct: 122 FIARYILGEIKRRTGLTASAGVAPSKFVAKIASGFEKPNG------LTVVPLDEVATFLA 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQ 236 L ++ + G+G+ ++ L G T+ DL T ++ F + ++ G Sbjct: 176 PLSIEAMHGVGKVTAQTLYKSGYHTIGDLQQTRPEQLKGIFGHDRGQQLYELAHGRDTRP 235 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + ++ I +F I D + + + +L C+ ++ IKTS Sbjct: 236 VV-AMRERKSIGSETTFAFDIDDPEEVFERVIPEMEDVLRQLDRRDLSCQTVTIKIKTSE 294 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F S +KL PT D +I A R D + + G+ + D + + Sbjct: 295 FQAR------SHQIKLNHPTHDHDEIRRLARRLFDEMNVT-EPVRLIGLTVSDLIPRTES 347 Query: 357 QLNL-FDDNAPRPGSE 371 L FD+ E Sbjct: 348 TRQLTFDELTKPSLEE 363 >UniRef50_C6VYA9 DNA-directed DNA polymerase n=15 Tax=Bacteroidetes RepID=C6VYA9_DYAFD Length = 372 Score = 300 bits (768), Expect = 6e-80, Method: Composition-based stats. Identities = 79/372 (21%), Positives = 146/372 (39%), Gaps = 26/372 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P+ GKP+ V + G V + EA+ GV+ P + Sbjct: 13 IIHIDMDAFYASVEQRDFPEYRGKPLAVGGSPTGRGVVATASYEARKFGVRSAMPSRQAI 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 L + ++ +E+Y +S + + +E S+DEA+ D+T + + Sbjct: 73 QLCPQ--IIFVHPRFEVYKSVSRSIREIFSRYTDLIEPLSLDEAYLDVTEDKMGIGSAME 130 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++I+ + + HLT G++ K +AK+A+ K G + + M Sbjct: 131 IAKQIKQAIQEELHLTASAGVSVNKFVAKIASDIHKPNGLTFIG------PSKIERFMDQ 184 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV+ G+G+ + K+ M + T DL + HF R +RG +++ Sbjct: 185 LPVEKFHGVGKVTADKMKGMQLFTGSDLKKLTEEELVNHFGKTGHFYYRIVRGIDDREVQ 244 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + +F +T M + + A +L ++ R ++ +K S F Sbjct: 245 T-HRETKSLGAEDTFTYDLTTPDEMNKELDRIGVTVANRLETKKLKGRTVTLKVKFSDFT 303 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ----- 353 + + P D I + A + L+ + G + G+ L +F Sbjct: 304 ------QITRNHSFAHPVGDLDTITDTAKQLLEKLDLEGKAVRLLGISLSNFHEPEVKYR 357 Query: 354 ---GVAQLNLFD 362 QL LF Sbjct: 358 KYKDPEQLELFP 369 >UniRef50_C4G590 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=C4G590_ABIDE Length = 447 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 87/418 (20%), Positives = 157/418 (37%), Gaps = 36/418 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D N FYAS E + P+L GKPV V N G V+ + AK GVK G ++ Sbjct: 23 ILHSDCNCFYASVELLHHPELRGKPVAVGGNPEARHGIVLTADYTAKRYGVKTGMALWQA 82 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLT 117 K + ++ +LY S E + ++E + IDE++ D++ D Sbjct: 83 KQVCPD--IIFLPPRMDLYLRFSRMAQEIYSEYTDKIEPFGIDESWLDVSESAGIKGDGY 140 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +EI + + +TV +G++ K AKL + K T G + + Sbjct: 141 AIAKEISERMKKELGITVSIGVSFNKIFAKLGSDYKKPDAITTMG------KDEYKAKAW 194 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV ++ +GR S+K MGIKT+ DLA D + K + G + Sbjct: 195 PLPVANLLYVGRATSRKFADMGIKTIGDLATMDEGILIKKLGKIGSVLHAFANGYDDSPV 254 Query: 238 --EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 E + + + S + + + ++ + A A +LR CR + ++ Sbjct: 255 KLENTSAPVKSVGNSTTTPKDMKTDEDVKIVLYILAESVAARLRENGFRCRTVEISLR-- 312 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG---------------HRY 340 ++ + S VKL + + +I AA ++ Sbjct: 313 ----DKELFHFSKQVKLKNASNITAEIAEAAYLLYKKNYRLPADEEELKNSIPEFYQKPL 368 Query: 341 QKAGVMLGDF-FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 + G+ D Q+++F + R ++ +DT+ + G ++ Sbjct: 369 RSIGICGTDLVTDYYWEQMDIFMNPRLREKQMKMDITVDTIRKRFGFYSIQRGLMYRD 426 >UniRef50_Q2P505 Polymerase V subunit n=4 Tax=Xanthomonadaceae RepID=Q2P505_XANOM Length = 428 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 180/432 (41%), Positives = 242/432 (56%), Gaps = 17/432 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FYASCE VF+P+L G+P+VVLSNNDGC IAR+ EAKALGV MG P K Sbjct: 1 MFALIDGNNFYASCERVFQPELRGRPLVVLSNNDGCAIARSDEAKALGVTMGQPIHKVPT 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 RR + S+N+ LY D+++R+ L + +PRVE+YSIDE+F DL G+ RD Sbjct: 61 QIRRR-LALRSANFGLYGDIASRIGVILRQAAPRVEVYSIDESFLDLAGI---RDRRQLA 116 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG-------GVVDL--SNLER 171 ++R V Q T + +GIA TKTLAKLAN AK R+ G GV DL + Sbjct: 117 VDLRERVYQWTGIPNCIGIAPTKTLAKLANRVAKDAARKPGSYPADLAGVCDLAALSASE 176 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 ++ A V D+WG+GRR S +L A G+ T DL D + F VV+ R REL+G Sbjct: 177 LDAVLRATSVGDLWGVGRRWSARLQARGVYTAADLRDAAADDLLAEFGVVMARAQRELQG 236 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 CL+LEE P +Q+I+ SRSFG +++ M +A+ ++A RA EKLR+ I F Sbjct: 237 HACLELEEVEPDRQQIMVSRSFGTWVSNPQDMSEALATFAMRATEKLRARGLTSSAIGIF 296 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 T F P + S + L + T DSR ++ R + G Y+KAGV L D Sbjct: 297 ADTDSFKPGVPQHNPSRTAPLASATSDSRIVLTTVRRLFQGFMREGFAYKKAGVCLMDLA 356 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRAMLSP 409 Q +LF R G E+LM+ +D +N + GRGT G Q W ++ +LS Sbjct: 357 KPEDLQGDLFTPA--RIGHEKLMSALDAINRRFGRGTAGLGASGWQNSPSWASRQELLSG 414 Query: 410 RYTTRSSDLLRV 421 R+TT +DL R Sbjct: 415 RFTTSLADLPRA 426 >UniRef50_A5D243 DNA polymerase IV n=4 Tax=Clostridia RepID=DPO4_PELTS Length = 402 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 93/408 (22%), Positives = 165/408 (40%), Gaps = 22/408 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFKQ 58 L D+N+FYAS P L GKPV+V G V+A + EAKA GVK G + Sbjct: 5 ILLADMNSFYASVHQAMEPRLKGKPVIVGGDPARRHGIVLAASVEAKACGVKTGMTVREA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-T 117 L + + + Y + S R++ +++ SP VE +SIDEAF D++G Sbjct: 65 AALCPQG--IFLKPRHSHYINFSARIIRIMKDFSPLVEPFSIDEAFMDVSGCGLLFGSSL 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + +++A + + VG+ K LAK+A K + L + + Sbjct: 123 EIAVKLKARIKNEVGVLCSVGVGPNKLLAKMAAGMQKPDG------LTLLDFPDVPVKIW 176 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV +++G+G R+ K+L + I T+ DLA ++ +++ F +V G + Sbjct: 177 PLPVRELFGVGSRLEKRLRDLNIHTIGDLARYPLQVLKQKFGLVGHILHLSASGIDYSPV 236 Query: 238 EEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + + I + Y ++ I ++R R +S +K + Sbjct: 237 DPCSLERVRSIGHQITLPRDYWGYNEIKVVILELCEIVCRRVRLGGYAGRTVSLTLKDTD 296 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F S + + PT + ++ A + L W + GV L Sbjct: 297 FL------WLSRARTMNYPTASADEVYRVAVQLLHQHWPPWKPVRMVGVSLAGLVKNRAE 350 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 QL+LF + + +L D + + G ++ A +R Sbjct: 351 QLDLFGEA---ERARRLHAACDRIKDRFGEHSILRAVSLTPAGVLRER 395 >UniRef50_C7NIB1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NIB1_KYTSD Length = 407 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 91/407 (22%), Positives = 159/407 (39%), Gaps = 20/407 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS V RP+L G+PV+V + V++ EA+A GV+ P + + L Sbjct: 12 VLHVDMDAFYASVALVDRPELRGQPVIVGGGHRSVVLSATYEARAFGVRSAMPMARARRL 71 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDFG 120 + ++E YA +S VM +++ V+ S+DEAF D+TG R Sbjct: 72 CPQAT--VVRPDHERYAAVSAAVMEIFRQVTHAVQPTSVDEAFLDVTGTSRRWGSPLQVA 129 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR TV H+T VGI +AK+A+ AK + + L Sbjct: 130 EWIRRTVAAEQHITCSVGIGPNPFVAKVASGQAKPDGTRQ------VTPAEVVSFLHPLD 183 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEE 239 V +WG+G + ++L G+ TV +A T + +++ + G ++ Sbjct: 184 VGVLWGVGEKTQEQLARFGLTTVAQVAHTPVVTLQRIVGDHAGAALAERAWGRDPQRVRP 243 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I ++F I D + + + R A + R+ R + ++ + F Sbjct: 244 VVAE-KTIGNGQTFDHDIDDPRQVETRLLLLSDRVAARARTAGVMGRTVQVTVRFADFT- 301 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ-L 358 S L P+ SR+I A ++ R + V L Sbjct: 302 -----TVQRSRTLQRPSDVSREIHQVAREVFASLGLQRARVRMVRVTLSGLTPTDRTPRQ 356 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 + D+ +D +A+ G G + A +++ RA Sbjct: 357 GMLDEPEVGWREA--DAAVDRASARFGAGIVRPASLLPEERGPRGRA 401 >UniRef50_C0ZFX0 DNA polymerase IV n=6 Tax=Bacillales RepID=C0ZFX0_BREBN Length = 413 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 100/412 (24%), Positives = 165/412 (40%), Gaps = 17/412 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + L D+ +FYAS E P+L KP+VV G V+A AK+ GV + ++ Sbjct: 8 IVFLIDMQSFYASIEKGANPELRNKPIVVAGDPERRSGVVLAACPIAKSYGVVAAEALWQ 67 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 + R+ +V E+Y +S ++ E + +VE YSIDE F D+TG + Sbjct: 68 AQQKCRQ--LVVVRPRMEMYIRISMQITRIFEAFTDKVEPYSIDEQFLDVTGSVHLFGDP 125 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +IR V T + VGI + K LAK+A K + V E + Sbjct: 126 LQMAAQIRQRVWMETGINCRVGIGENKVLAKMACDNFAK---KREEGVFWLKRETLADTL 182 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP++ ++G+G R+ + MG+ + LAD + +H+ V E R G Sbjct: 183 WKLPIEKLFGVGSRMKRHFHRMGVYQIGQLADMRPAILTRHWGVNGEVLWRTAHGIDDSP 242 Query: 237 LE-EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + +++ I + ++ + + R + +S + + Sbjct: 243 VALDSYDSQKGIGHHMTLPRDYHTASEIKVVLLELCEEVCRRARKKELMGSVLSVGCRGA 302 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 A G +KL T D+ + AA D WQ + GV LG V Sbjct: 303 DLAAGT---GFGRQMKLTEQTNDAMTLYEAACFLFDRHWQE-TPVRSIGVNLGQLVPDNV 358 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QLNLF DN L MD + ++ G+ + A ++ +RA Sbjct: 359 VQLNLFTDN---HKRRSLAQAMDDIRSRYGQDAILRAASVLEAGQAKERARK 407 >UniRef50_B8DRU5 DNA-directed DNA polymerase n=13 Tax=Proteobacteria RepID=B8DRU5_DESVM Length = 497 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 178/435 (40%), Positives = 238/435 (54%), Gaps = 17/435 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 +AL D N FYASCE +FRPDL GKP+VVLSNNDGC+I+R+ EAKALGV+MG P FK + Sbjct: 62 WALVDCNNFYASCERLFRPDLRGKPIVVLSNNDGCIISRSDEAKALGVEMGAPAFKVRRE 121 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 R GV FSSNY LY D+S+RVM TL LSP V++YSIDEAF L G D GR Sbjct: 122 LARLGVHVFSSNYALYGDLSSRVMRTLGTLSPEVDVYSIDEAFLPLRGPLA-ADPVAVGR 180 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER-----QRKLM 176 +R V + T + + VGIA T+TLAK+A AK + GV DL+ L+ Sbjct: 181 ALRERVARWTGIPISVGIAPTRTLAKIAGRVAK-RTPRCEGVFDLARSREVLGMSVDDLL 239 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC-- 234 +LPV+ VWG+GRR++ L GI T L D ++R+ +V RTV ELRG PC Sbjct: 240 GSLPVESVWGVGRRLAGMLRGAGIATARALRDAGDDWVRRRMSVTGLRTVLELRGLPCIG 299 Query: 235 -LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + E + ++ SRSF RI D +R+A+ ++AA A KLR ++ ++ Sbjct: 300 AEEQGEPPSPRHTVVSSRSFAGRIADVAMLREALATHAALAGAKLRRAGLVAGGLAVHVR 359 Query: 294 TSPFALNEP-YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 T+ +S ++ L PT DS I A LD +++ G+ Y KAGVML Sbjct: 360 TARHDEQAALRCDDSVALPLPVPTADSAVFIRLAHEGLDRVFRPGYPYAKAGVMLYGLER 419 Query: 353 QGVAQLNLF----DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRAM 406 Q +L E+LM V D +NA+ GRG L A +G+ W M++ Sbjct: 420 ADTRQGSLLALADGTAERDAARERLMAVADRINARYGRGKLRHAAEGLDAEAPWHMRQKH 479 Query: 407 LSPRYTTRSSDLLRV 421 SPR TT +L Sbjct: 480 RSPRRTTAWDELAEA 494 >UniRef50_D1VVF6 DNA polymerase IV n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVF6_9FIRM Length = 412 Score = 298 bits (763), Expect = 2e-79, Method: Composition-based stats. Identities = 88/400 (22%), Positives = 169/400 (42%), Gaps = 23/400 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D+N+FY SCE + +P+L +PV V + G ++A+ AK GV G+P ++ Sbjct: 3 ILHVDMNSFYVSCELIDKPNLKSQPVAVGGDEKLRHGIILAKTPMAKKFGVLTGEPIWQA 62 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 K ++ F NYE Y +S + +VE Y +DE F D+TG + Sbjct: 63 KKKCP--NLLIFPPNYEKYIRISKAAQKIYYSYTNQVEPYGMDECFLDITGSKKLFGSPE 120 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 EI+ + +TV VG++ K AKLA+ K E +K++ Sbjct: 121 KIAFEIKERIKTELKVTVSVGLSFNKVFAKLASDMRKPD------YCTFIYKENYKKIVW 174 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V D+ IG + +KKL+ + IKT+ DLA+ D +RK+ + + G ++ Sbjct: 175 PLKVQDMIMIGPQTTKKLNKINIKTLGDLAEADPEILRKNLGINGIKIYNWANGMDNTRV 234 Query: 238 EEFAP--TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 +++ + I S + E + +Y +R I +++L + R ++ + + Sbjct: 235 KDYYQIIPIKSIGRSITCKEDLLNYEEVRAVIQKLCEDISKRLIENNYLARGVNVGYRKN 294 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI--WQAGHRYQKAGVMLGDF-FS 352 + S+ V L P+ + +I A ++ + + + + Sbjct: 295 NLS------HESSDVLLDYPSNSTLEISAKAMDVFLKNFTFKDDEKIRALYIRAIKLIQN 348 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 + Q++LF+D L + + + G+ ++ + Sbjct: 349 REAIQIDLFNDVKKHFKYLSLEKAIYNIRNRYGKNSITYG 388 >UniRef50_B9JZV6 DNA-damage-inducible protein n=17 Tax=Bacteria RepID=B9JZV6_AGRVS Length = 385 Score = 298 bits (763), Expect = 3e-79, Method: Composition-based stats. Identities = 89/358 (24%), Positives = 150/358 (41%), Gaps = 17/358 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E +P+L GKPV V + G V A + EA+A GV P K Sbjct: 35 IIHVDMDAFYASVEQRDKPELLGKPVAVGGSAARGVVAAASYEARAFGVHSAMPSVTAKR 94 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 ++ +++Y +S+++ E +P +E S+DEA+ D+T + T+ Sbjct: 95 KCPD--LIFVPPRFDVYRQVSHQIREIFAEYTPLIEPLSLDEAYLDVTENLKGMEIATEI 152 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIRA + T L GI+ K LAK+A+ K + + + + AL Sbjct: 153 ALEIRAKIKAATGLNASAGISYNKFLAKMASDLNKPNGQA------VITPKNGPGFVEAL 206 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV G+G ++++ GI+T LDL ++F++ HF RG Q+ Sbjct: 207 PVKRFHGVGPATAERMQRHGIETGLDLKSKSLQFLQTHFGKSGSYFYGIARGIDERQVR- 265 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + +F E I D R + A + S + I+ IK S F+ Sbjct: 266 ADRIRKSVGAEDTFVEDIDDLDPARAELRPLAEKVWRYCESHDIKGKTITVKIKYSDFS- 324 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S + D I+ A L +++ H + G+ L ++ Q Sbjct: 325 -----QATRSKTVAGYVSDIDMIMGIAEPLLASVFPFKHPVRLLGITLSSLNTEESEQ 377 >UniRef50_A6EED8 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Pedobacter sp. BAL39 RepID=A6EED8_9SPHI Length = 417 Score = 298 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 151/422 (35%), Positives = 225/422 (53%), Gaps = 5/422 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFA D+N Y SCE +FRP+L + VVVLSNNDGCVIAR+ EAKA+G+KM D F ++ Sbjct: 1 MFAHVDINNCYVSCERLFRPELERRVVVVLSNNDGCVIARSNEAKAIGIKMADAEFIVRE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + V FSSNY LYADMS R+M+ L + + +YSIDEAF L G DL+ Sbjct: 61 RLKESNAVIFSSNYALYADMSARLMNNLARYTYTLMVYSIDEAFMAL-GNIKGIDLSQHA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 I V + T L + VG+ T +LAKLAN AA ++Q + L E+ ++ P Sbjct: 120 ATISNNVFRDTGLPITVGVGPTLSLAKLANKAA---KKQGRNFMVLDTEEKINAMVQTFP 176 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++DVWGIG KL + I+T D F+RK V R +EL G PC +++ Sbjct: 177 IEDVWGIGMAYYNKLREINIQTAHDFRSLKADFVRKQMTVQGWRLHQELWGIPCNVIKDV 236 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A + I S+SF T + +A+ +A A KLR + ++ +++T+ + Sbjct: 237 AERSKGIESSQSFNTYQTTLEKVEEAVAMHAGTVALKLRQQKSMALNLTVYLRTNKHNVK 296 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 Y S +VK+ ++ ++L AIWQ G+ Y K GV +G Q NL Sbjct: 297 HDQYYPSLTVKIPFAANSVHELTQVCVQALRAIWQPGYNYLKTGVRATGIIPEGEVQNNL 356 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F++ E + ++D +N + GRGTL +G + W+MK+ LS +YTT ++++ Sbjct: 357 FNEYDNSRKQE-ISKLLDQINDRYGRGTLRLGVEGFDKTWKMKQDYLSRQYTTNWAEIIV 415 Query: 421 VK 422 + Sbjct: 416 TR 417 >UniRef50_Q18A91 DNA polymerase IV n=46 Tax=Bacteria RepID=DPO4_CLOD6 Length = 365 Score = 298 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 75/370 (20%), Positives = 145/370 (39%), Gaps = 21/370 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E L G+PV+V N + G V + EA+ G+ P Sbjct: 7 IIHIDMDAFYASIEQRDNKKLKGRPVIVGGNPQSRGVVATCSYEARKFGIHSAMPSAVAY 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 + V +++Y +S ++ + VE S+DEA+ D+T +N + Sbjct: 67 NRCPYA--VFVRPRFDVYKSVSEKIRDIFYRYTDLVEPLSLDEAYLDVTKNKKNIDSSIE 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++I+ + + LT G++ K LAK+A+ K + + E + + Sbjct: 125 IAKQIKKDIFREVGLTSSAGVSYNKFLAKIASDLRKPNG------LTVITEENAQDFLDK 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV+ +G+G+ S L +GIKT DL ++ + F + RG +E Sbjct: 179 LPVNKFFGVGKVTSNTLKNLGIKTGYDLRCLNLFELENIFKKRGYELYKFARGIDDRPVE 238 Query: 239 EFAPTKQEIICSRSFGERIT-DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + + + D R + +L++ ++ + ++ IK F Sbjct: 239 P-NRVRKSVGAETTLSHNLDIDEEETRNILDELCEEVCHRLKNSEKFGKTLTLKIKYEDF 297 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ--GV 355 + S+ L + DI + L + G + + GV + + + Sbjct: 298 TK------ITRSLSLEHYIDEYNDIRSGVDNLLRNVEVNGKQIRLLGVTISNLSDKKETY 351 Query: 356 AQLNLFDDNA 365 + LF+ Sbjct: 352 KDITLFEYMD 361 >UniRef50_Q2RYM0 UmuC protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYM0_SALRD Length = 432 Score = 297 bits (761), Expect = 4e-79, Method: Composition-based stats. Identities = 166/430 (38%), Positives = 225/430 (52%), Gaps = 13/430 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D FY SCE VF P L G+PV VLSNNDGCVIAR+ E K GV MG P FK ++ Sbjct: 4 VFALIDCENFYVSCERVFDPSLRGRPVAVLSNNDGCVIARSEEVKEAGVPMGAPLFKWRE 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 SSNY LY DMS RV S +EE + +E YSIDEAF G+ +L+ Sbjct: 64 ELDEIEAEILSSNYTLYGDMSRRVHSIIEEEALALERYSIDEAFARFPGLSRD-NLSRVA 122 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER--QRKLMSA 178 +R + + + V VG+ TKTLAK+A+ K +R G + + +L+ Sbjct: 123 DRLRRRIRRHIGIPVRVGVGPTKTLAKVADLNGKARKRAGWGQGTYVCPDEPKREELLKR 182 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + V D+WGIG K L G+ + +IR VV RT ELRG CL LE Sbjct: 183 VSVGDIWGIGSAYEKTLQEKGVASAAGFRALPGPWIRSEMTVVGLRTAWELRGRSCLDLE 242 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 P ++ ++ SRSFGER+ ++R+A+ +A RAAEKLR E + I FI T F Sbjct: 243 LVRPDRKTMVRSRSFGERVETKANLREALAKHAQRAAEKLREEGLVAKGIKVFITTKRF- 301 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + P+Y N + L T + A+ R L+ I+++GH Y+KAGV L D Q Sbjct: 302 GDPPHYSNGVAGALPEHTARASAFAKASRRLLEPIYRSGHGYKKAGVCLYDIRPSRPHQE 361 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG-------IQQQWQMKRAMLSPRY 411 +LF R E LM +D +N K G+G + A G ++++W MKR SP Y Sbjct: 362 SLFG--QGRKEDEDLMEAVDQINRKHGKGAIGLAAAGLPEGKGHLEREWTMKRQRRSPLY 419 Query: 412 TTRSSDLLRV 421 TTR +L Sbjct: 420 TTRWDELPVA 429 >UniRef50_C8NE97 DNA-directed DNA polymerase n=2 Tax=Granulicatella RepID=C8NE97_9LACT Length = 352 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 87/362 (24%), Positives = 153/362 (42%), Gaps = 19/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+AS E P+ GKPV+V N G V + EA+A GV+ P K Sbjct: 4 ILHVDMDAFFASVEQREHPEWRGKPVIVGGKPNERGVVSTCSYEARAFGVRSAMPTAKAM 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 L + + NY LY ++S++V + + +E SIDEA+ D+T T Sbjct: 64 KLCPKA--ILTPGNYSLYKEISSQVREVFKSFTNMIEPLSIDEAYLDVTNNSRGIASATL 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+ V ++T LT VG++ K LAK+A+ K + + E ++ + Sbjct: 122 VAHLIQKEVYEKTGLTCSVGVSFNKFLAKMASGYQKPSG------ITVITPENAQEFIRT 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 +P+ D +G+G+ ++KL GI+T DL + F + R ++RG QL Sbjct: 176 IPIGDFYGVGKVSAEKLRRAGIETGEDLLHLSKAELESRFGNLGPRLYAQVRGISNDQLT 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + ++ + R+ + TD+ + + + ++ A L+ R IS ++ S F Sbjct: 236 LY-RERKSMGSERTLIKDTTDHGILSEYLEKFSLEIASMLQKRALASRTISLKLRDSNFN 294 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 S SV L +I+ A + + + + G+ + Sbjct: 295 ------TTSKSVTLRDYFNKKEEILQLALQLFEEMMDE-KPIRLIGLSVSHLEKTDKIYK 347 Query: 359 NL 360 L Sbjct: 348 QL 349 >UniRef50_D1PR84 DNA-directed DNA polymerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR84_9FIRM Length = 415 Score = 297 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 94/412 (22%), Positives = 159/412 (38%), Gaps = 25/412 (6%) Query: 1 MFALCDVNAFYASCETVFRP------DLWGKPVVVLSN---NDGCVIARNAEAKALGVKM 51 ++ DVN+ + S + + DL P V + G V+A+++ AK GV+ Sbjct: 4 VYFHVDVNSAFLSWSALKKLRAGETLDLRTVPSAVGGDEEKRHGVVLAKSSPAKKFGVRT 63 Query: 52 GDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR 111 G+ F + ++ +++ Y S +++ L + +P VE YSIDEAF D+TG Sbjct: 64 GESLFSARLKCPE--LIVTPPDFDFYVQNSKALIAILRDYTPDVEQYSIDEAFLDMTGTE 121 Query: 112 NCRDL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 IR V + TV +G+A + LAK+A+ K + T E Sbjct: 122 ALFGPPLTVAHTIRNRVREELGFTVNIGVASNRLLAKMASDFEKPDKVHT------LFPE 175 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 M LPV ++G+G K+L+ GI T+ DLA T+ R I F + Sbjct: 176 EVPDKMWPLPVGSLFGVGPSAVKRLNQCGIYTIGDLARTERRVIVGIFGTRGDTLWNYAN 235 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G + + S + + +T + + +LR++ + R ++ Sbjct: 236 GREADPVTKQTTRDNTYGNSVTLPQDLTRPEQADATLLALCDSVGRRLRTDGKTARVVTV 295 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 + + F S L PT + + A + + +W G + GV Sbjct: 296 QLVDNAFR------RTSHQRTLPDPTNSTDRLYEVALQLMRQMW-PGRPVRLVGVSAEKT 348 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 + QL+LF D R E+L D L K G + A Sbjct: 349 GTDNFEQLDLFTDTTRRQKQEKLDRTADALRRKFGGAAVTRAKLLTPDTRAP 400 >UniRef50_C5D272 DNA-directed DNA polymerase n=5 Tax=Geobacillus RepID=C5D272_GEOSW Length = 414 Score = 297 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 92/368 (25%), Positives = 162/368 (44%), Gaps = 22/368 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAK-ALGVKMGDPWF 56 + D N+F+ASCE P L GK VVV G V+A N AK G+ P + Sbjct: 11 VIFHVDCNSFFASCEIARDPSLKGKAVVVAGDPKERKGVVLAANYIAKQRFGIYTTMPLW 70 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + K + +V ++ LY ++S +V L +P +E SIDE + D+T + Sbjct: 71 EAKKRCPQ--LVVLKPDFHLYREISEKVFQFLATFTPVLERASIDEGYLDITDCYSLGSP 128 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 D +I+ +LQ H+ V +GIA K LAK+A++ K + + K++ Sbjct: 129 LDIAEQIQKELLQTLHIPVSIGIAPNKFLAKMASNMKKPLG------ITVLRKRDVPKVL 182 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV ++ GIG + +KKL+++GI T+ +LA + ++ + R G Sbjct: 183 WPLPVQEMHGIGDKTAKKLNSIGIFTIGELAKAEKVTLQNLLGITGVRLKEWANGIDPRP 242 Query: 237 LEEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ + K + I S + +T+ + + + A + +++ + + I+ S Sbjct: 243 VDPESGEKWKSIGSSTTLPRNVTEERILLEVLRDLAQSVSNRMKQKGVVSSTVQIMIRYS 302 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF--FSQ 353 F + S P Q++ +I A L W G+ + G+ D + Sbjct: 303 NFQ------TITRSKTWENPFQEAEEIFQRAVYLLKRHWN-GNPVRLLGITAVDVFDKKE 355 Query: 354 GVAQLNLF 361 V QL+LF Sbjct: 356 AVKQLDLF 363 >UniRef50_Q3B3L9 DNA-directed DNA polymerase n=2 Tax=Chlorobium/Pelodictyon group RepID=Q3B3L9_PELLD Length = 432 Score = 297 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 191/423 (45%), Positives = 255/423 (60%), Gaps = 6/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE VF P L G+PVVVLSNNDGCVIAR+ E+KALG+ MG P F+ +D Sbjct: 1 MFALADCNNFYVSCERVFNPMLCGRPVVVLSNNDGCVIARSEESKALGIAMGTPLFRCRD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + R GV FSSNY LY DMS+RVM+TL ++P E YSIDEAF DL+G R L + Sbjct: 61 VIGRHGVAVFSSNYPLYGDMSSRVMNTLGAMAPEQERYSIDEAFFDLSGFRRF-GLREHA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +R TVL+ T + V +GIA TKTLAKLA AAKK GGV+ L +R R+ +++ Sbjct: 120 ALMRRTVLKHTGIPVSIGIAHTKTLAKLAAKAAKKDPSC-GGVLMLEGADRVRRALASTH 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++DVWGIGR+ S KL GI+T D A +R+ V + EL+G CL LE Sbjct: 179 LEDVWGIGRQWSLKLALQGIQTAADFAGMPPALVRRLLGVTGAKVQAELQGHRCLPLELV 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P KQ I SRSFG + +++A+ S+A+RAA KLR E ++ FI TSPFA + Sbjct: 239 RPMKQTICTSRSFGRNVFSVEELQEAVASFASRAASKLRREGSTASLLTVFISTSPFAAS 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN- 359 S +V L D+ ++ AA+R L+AI+Q GH Y+KAGV+LG + + Sbjct: 299 ALRREASRTVSLPRAADDAMTLVTAASRVLEAIYQGGHPYRKAGVLLGAIAPKNPPGESF 358 Query: 360 -LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 LF D +E L VM+ +N + G G++ A + + W+ +SPRYTT ++ Sbjct: 359 LLFGD-EGEGRAEALQQVMEQVNLRYGNGSIRLAAE-DSRAWEPLCRHISPRYTTSWEEI 416 Query: 419 LRV 421 LRV Sbjct: 417 LRV 419 >UniRef50_C7R3I3 DNA-directed DNA polymerase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3I3_JONDD Length = 413 Score = 297 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 99/398 (24%), Positives = 171/398 (42%), Gaps = 20/398 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E RP+L G+PV+V V+A + EA+ LGV+ P + + L Sbjct: 23 VMHVDMDAFYASVEIAQRPELRGQPVIVAGGERSVVLAASYEARELGVRSAMPTQRARLL 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFG 120 V + + YA +S VM L+ ++P VE SIDEA+ D++G+R + L+ Sbjct: 83 APHA--VWVAPRHHEYARISRSVMDYLDTITPWVEQVSIDEAYLDVSGIRGPQGTLSARA 140 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +E+RA V +T VG+A K LAKL + AK + + ++++ ++ LP Sbjct: 141 QELRAQVKAHHGVTCSVGVAANKFLAKLCSTQAKPDG------LLVLPRGQEQEFLNLLP 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEE 239 + + GIG + ++L G+ T+ D+A + ++ R + RG + Sbjct: 195 IGALMGIGDKSERRLKQHGLHTIRDVAALEPSYVVALLGATLGNRLIHLARGIDDRPVTP 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + +F + +R + S A +LRS R IS I+ F Sbjct: 255 T-RVEKSVGAEHTFAQDEGSREVLRATVRSLADTVTSRLRSRGLLARTISVKIRDVNF-- 311 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + V L +P+Q + + A +D G R + GV + L Sbjct: 312 ----HTITRHVTLHSPSQSLHVVFSQAWTLVDRQLLPGQRARLLGVRAEQLVPEEGQPLT 367 Query: 360 L---FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 L + + +D + AK G + Q Sbjct: 368 LTLEESLTDHHDTTRKTEETIDAIRAKFGSRAISLGVQ 405 >UniRef50_A5FSS1 DNA polymerase IV n=5 Tax=Dehalococcoides RepID=DPO4_DEHSB Length = 390 Score = 297 bits (759), Expect = 7e-79, Method: Composition-based stats. Identities = 81/399 (20%), Positives = 151/399 (37%), Gaps = 23/399 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+ S E RP+ KPV+V G V A + EA+ G+ G P K Sbjct: 6 VMHVDLDAFFVSVEQAVRPEFKDKPVIVGGKPERRGVVAAASYEARKFGIHSGMPLITAK 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + + N++LY + S + M L + SP +E +DEA+ ++TG + + Sbjct: 66 HLCPQA--IFIEGNHQLYREYSEKFMLILSDFSPFLEPMGLDEAYLEVTGFESLHGSIAQ 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +IR + + +GIA +K AK+A AK + + ++ Sbjct: 124 MASKIRRRITAELGINASIGIANSKVAAKIATEQAKPNGQCE------VPAGEEASFLAP 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + + GIG++ + L ++GI T+ LA F++ G + Sbjct: 178 LDIAVMPGIGKKTEQHLKSLGIDTLGKLAALPASFLKSCLGTYAPYLSNAAMGIDNRPV- 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E + I +F + + + + + LR + R + I+ + F Sbjct: 237 EMPSEAKSISRETTFETDTRNQTFLEAKLSYLSEKITATLRKRGKQTRVVQIKIRFADFT 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDFFSQGVAQ 357 + L P +R+I A ++ I + + GV + DF Sbjct: 297 ------TLTRQKHLGQPASGNREIFQTALSLMNGILDSDRQAVRLLGVGISDFCGPEKQ- 349 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 + + + E+L +D + K G ++ Sbjct: 350 ---LEIDPAKARLEKLDASLDKIRQKYGFSSVQTGRTYR 385 >UniRef50_A6GF38 DNA-directed DNA polymerase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GF38_9DELT Length = 409 Score = 296 bits (758), Expect = 9e-79, Method: Composition-based stats. Identities = 108/423 (25%), Positives = 179/423 (42%), Gaps = 27/423 (6%) Query: 7 VNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 ++AF+AS E P L GKPV+V G V A + EA+ G P + + Sbjct: 1 MDAFFASIEQRDDPRLRGKPVLVGHAGKRGVVAAASYEARRFGCHSAQPMAVARRRCPQA 60 Query: 66 GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE-IR 124 V +E+Y +S + LE +P VE SIDEAF D++G + E IR Sbjct: 61 --VIVPGRHEVYLGVSAELFEILEGFTPVVEGLSIDEAFLDMSGTQRLHGPPRVAAERIR 118 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 TV +R LT VGIA K +AK+A+ K + + R+R + LPV ++ Sbjct: 119 QTVAERLRLTCSVGIASAKFIAKIASDQDKPDG------LTVVEPGRERAFLHRLPVREL 172 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK 244 WG+G R + L+ G++T+ D+A+ + + + + G + + Sbjct: 173 WGVGPRTQEVLERYGVRTIGDIAELGLETLERDLGEHGRHLHQLSVGVDPRPVSP-GRER 231 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 +++ +FGE + P + + + R A++L ++ + R + ++ + F Sbjct: 232 KQVSHENTFGEDLRSRPEIEDWLLRQSTRVADRLVAKGLHGRKVHLKLRDASFT------ 285 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH----RYQKAGVMLGDF-FSQGVAQLN 359 + L PTQ++R I A LD + G R + GV + DF QL Sbjct: 286 TWTRQCSLDEPTQEARVIFARARALLDRLEAEGKLRALRIRLTGVGVSDFRRDAPARQLE 345 Query: 360 LFD-----DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 L + A E + V+ + + G L AG G ++ A P +TR Sbjct: 346 LLPVEGAAEPATDDRGEAVQDVLSEVRRRFGGKALGLAGVGGIRREARDDAGAVPDLSTR 405 Query: 415 SSD 417 D Sbjct: 406 IDD 408 >UniRef50_B9MMT7 DNA-directed DNA polymerase n=2 Tax=Clostridia RepID=B9MMT7_ANATD Length = 411 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 92/405 (22%), Positives = 161/405 (39%), Gaps = 21/405 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + CD+N FYAS E +++P+L KPV V G V+A+N AK+ G++ GD ++ Sbjct: 4 VILHCDLNNFYASVECLYQPELRNKPVAVCGESELRHGIVLAKNQIAKSYGIQTGDVIWQ 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDL 116 +V N+ LY S V E + +E + IDE + D++ R Sbjct: 64 ALKKCP--NLVILKPNFPLYIRFSKLVQRIYSEYTDLIEPFGIDECWLDVSQSTGILRSG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 EI+ + LTV VG++ K AKL + K V + E ++++ Sbjct: 122 RKIAYEIKERIKSELGLTVSVGVSFNKVFAKLGSDYKKPDA------VTVITKENFKQIV 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP D+ +G KKL + I T+ D+A + ++++ E G Sbjct: 176 WPLPAKDLLYVGSATEKKLSSRAIYTIGDIAKSSPEYLKRILGKWGEVLWIFANGLDTTP 235 Query: 237 LEEFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + I S + +T Y I + A++LR ++ C + +I+ Sbjct: 236 VTPPLFEDNIKGIGNSITLPRDLTCYEDAEYVIRMLSESVAQRLRQQYLKCYTVQVWIR- 294 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + + KL PT +R+I A W + + GV D Sbjct: 295 -----DSFLFSITRQEKLKNPTFLAREISQKAFEIFKKHWNFKNSIRSLGVRALDLV-CA 348 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + L D+ + EQL +D + + G+ + A + Sbjct: 349 NSFYQLEFDSLKKFKLEQLEKTVDQIRRRFGQSAVLPAILLTKSD 393 >UniRef50_A5N2U5 DNA polymerase IV n=5 Tax=Clostridiaceae RepID=DPO4_CLOK5 Length = 400 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 90/411 (21%), Positives = 161/411 (39%), Gaps = 27/411 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + L D+NAF+ SCE+ P++ GKP V N G ++ N EA+ GVK K Sbjct: 4 VIFLVDMNAFFISCESTRHPEIIGKPAAVAGDPKNRSGIILTANYEARKFGVKTTMVLHK 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 L ++ ++ Y S VM L + +P +E SIDEA+ D+TG Sbjct: 64 VLKLCP--NIIIIPPDHCFYKQKSKEVMGILSKYTPVIEKNSIDEAWLDMTGCERIFGRS 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 I + L +GI++ K LAK+A+ K + + Sbjct: 122 YQTAECIMKHINSELGLDCSIGISENKFLAKMASQMKKPLGITKLW------KKDIELKL 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV+ + GIG++ ++KL M IKT+ +LA+ D R++ K V + G Sbjct: 176 WPLPVEFMNGIGKQTARKLREMKIKTIGELANFDRRYLIKKLGKVGAEIHQFANGIDVSP 235 Query: 237 LEEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + + I S + I+D S + + + + R ++ + IK S Sbjct: 236 VTPHSHKDVKSIGKSITLAHDISDIESAKVILMELSDKVGMTARKYNKKGHTVQINIKYS 295 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + + T ++I +A L+ W + G+ L F Sbjct: 296 NFQ------SITRQRTITE-TYLVKEIYSAGIEMLEKNWNERLPVRLLGISLSGFSKYNE 348 Query: 356 -AQLNLFDDNAPR------PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 Q+++F+ +++ +D++ K G + + + Sbjct: 349 DEQISMFNMLEIDNEKSSVRKIDKIEAAIDSIRKKYGDSIIKSGSLIKKSK 399 >UniRef50_B8G1R4 DNA-directed DNA polymerase n=2 Tax=Desulfitobacterium hafniense RepID=B8G1R4_DESHD Length = 423 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 99/404 (24%), Positives = 167/404 (41%), Gaps = 21/404 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFKQ 58 L D N++YASC P+L GKP++V + ++ + EA+ GVK P F+ Sbjct: 16 IVLFDANSYYASCHQAVNPELQGKPLLVAGDPRNRTGIILTASYEARFYGVKTAMPLFQA 75 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRDL 116 L V S ++ LY D+S ++ +E + +E+ S+DE F D G Sbjct: 76 LKLCPEA--VVLSPDFRLYLDLSRKMWEIVERYTDEDHIEVVSVDECFADFRGSHLLFGS 133 Query: 117 -TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK--KWQRQTGGVVDLSNLERQR 173 + R ++ +L+ L V VG++ K AKLA+ + K + + + Sbjct: 134 TEEIARRVQKEILEELGLGVSVGVSYCKIFAKLASDYQRDPKTRVKLPRSFTVIAPGELE 193 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + L V ++ GIGR+ K+L +GI+T+ DLA + +RK F V + G Sbjct: 194 SKVWPLGVGELSGIGRQTEKQLADLGIRTIGDLAQASPQALRKGFGVYGAKLYAWANGRD 253 Query: 234 CLQLEEFAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + I S + + ITD + + A K+R E + ++ + Sbjct: 254 ERPVTPEDQAKDHSIGRSITLPQDITDPEQGTEVLLFLADSVGRKVRREETKAQTLTVQV 313 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 K + F + S L PT + I + + L W G + G+ Sbjct: 314 KDAEFK------TRTYSTTLFEPTDSTDVIYRESLKLLAK-WPQGKPIRLLGLTASRLQK 366 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 G+ QL+LF + + +L +D L K G G L Q + Sbjct: 367 -GIEQLSLFQEES--EEQTELDRTVDELRDKYGSGILMRGTQYL 407 >UniRef50_A0L3I2 DNA-directed DNA polymerase n=1 Tax=Shewanella sp. ANA-3 RepID=A0L3I2_SHESA Length = 416 Score = 295 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 154/421 (36%), Positives = 237/421 (56%), Gaps = 10/421 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + ALCD N FY+SCE +F P GKP++V+SNNDG + + EA ALG+K P+F+ + Sbjct: 4 IIALCDGNKFYSSCEQIFNPQYRGKPLIVVSNNDGMTVTLSPEAAALGLKKFTPYFQVAE 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 R GVV SSNY LY+++S++ M YSIDE F + ++L+ G Sbjct: 64 FCRANGVVVCSSNYALYSEISSQFMKVASRECFSYFPYSIDEIFAEFGNDDTPQNLSILG 123 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R++R V + L +GVG+ T TLAK ANHAAK+ + + + ++ A+ Sbjct: 124 RKLRHDVWREVRLPIGVGLGDTLTLAKAANHAAKRLGYRGVC---VIKAHNREAILGAML 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 DVWG+G+RI ++L +MGI T L LA + RK F V +ERT+ +L G ++ Sbjct: 181 TTDVWGVGKRIGQRLSSMGIHTALQLAQMKTKTARKMFGVNIERTIFKLNGTKAFNWDDM 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K++I +RS G+RIT +++A+ +A AA KLR + R + F +TS + + Sbjct: 241 PVNKRQIFSTRSVGQRITTIEGLKEALSFHACEAARKLRGQKSVARCLVFFAQTSAYDKH 300 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 G S ++ L PT DS I T ++++ + A Y + GV L D QL++ Sbjct: 301 GVS-GFSRTIHLPAPTSDSMIISQQITSAVESFYAAV-PYYRVGVGLLDIEP--GLQLDM 356 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F+DN +P LM+VMD LN + G+G ++ A GI+++WQM+RA LSP Y T +++ Sbjct: 357 FNDNLGKP---ALMSVMDRLNEQMGKGAVFVAANGIEKKWQMRRAFLSPSYLTNWNEIPT 413 Query: 421 V 421 + Sbjct: 414 I 414 >UniRef50_Q0AWD6 DNA-directed DNA polymerase n=7 Tax=Bacteria RepID=Q0AWD6_SYNWW Length = 419 Score = 295 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 90/405 (22%), Positives = 161/405 (39%), Gaps = 21/405 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D+N FYAS E + RP++ K V V + G V+A+N AK G++ G+ ++ Sbjct: 4 VILHSDLNNFYASVECLHRPEIRNKAVAVCGDPAARHGIVLAKNYLAKESGIQTGEVIWQ 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDL 116 + +V NY LY S S + +VE + +DEA+ D+TG + Sbjct: 64 AQQKCPE--LVVVPPNYPLYLKFSRLARSIYASYTDQVEAFGLDEAWLDVTGSIHIFGSG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + EIR + ++ VG++ K AKL + K + + + ++ Sbjct: 122 IEMADEIRERIKLELGVSASVGVSYNKIFAKLGSDMKKPDAT------TIISKDNFKQTA 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP D+ +GR +K GI T+ D+A++D ++ E G Sbjct: 176 WPLPASDLLYVGRATCRKFARWGISTIGDIAESDPLVLKARLGKWGEVLWSFANGYDRSP 235 Query: 237 LEEFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + S + + + + I + + A +LR CR + ++ Sbjct: 236 VVAMGEESIIKSVGNSITTPRDLENNEDVLLIIYALSESVAARLREHGFKCRTVHIHVR- 294 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 ++ + KLL P S DI A + + H + GV D + Sbjct: 295 -----DKNLFTFGVQGKLLRPGNISNDIAEKAMALFRSHYSWAHPIRSIGVRGCDLIAAD 349 Query: 355 -VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 QL+LF D R E++ +DTL + G ++ A + Sbjct: 350 SHEQLSLFTDEEKRIKQEKIEATLDTLRCRFGHFSVQRAVLLKDR 394 >UniRef50_C5BW73 DNA-directed DNA polymerase n=4 Tax=Actinomycetales RepID=C5BW73_BEUC1 Length = 415 Score = 294 bits (753), Expect = 3e-78, Method: Composition-based stats. Identities = 101/401 (25%), Positives = 170/401 (42%), Gaps = 18/401 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E + PDL G+PV+V + G V+A EA+A GV P + + L Sbjct: 23 ILHVDMDAFFASVELIRAPDLRGRPVIVGGEHRGVVLAATYEARAFGVHSAMPMTRARAL 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTDFG 120 + V ++ Y ++S VM L +++P +E S+DEAF D++G R Sbjct: 83 CPQA--VVIPPDHARYEEVSRVVMGLLADVTPVLEQVSVDEAFLDVSGARRRLGSPVAIA 140 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR+ + + + VG+A TK LAKLA+ AK + L + +LP Sbjct: 141 TAIRSRIREVAQIPASVGVASTKFLAKLASQTAKPDG------LLLVPEAASVPFLHSLP 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEE 239 V +WG+G R + +L GI++V LA T +++ R + Sbjct: 195 VGALWGVGERTAAQLREWGIESVEQLAHTPPDVLQRRLGRAGGARLYDLAWNRDPRPV-T 253 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 A ++ I +F +TD + + + A R A +LR R ++ ++ S F Sbjct: 254 VARVEKSISSEHTFVTDVTDAAELGRTLLEQAHRCARRLRRGGFLARGVTIKVRMSDFT- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S +L P+ + D+ AA L A+ + GV + + + Sbjct: 313 -----TLTRSRQLDHPSDVAHDVYAAARALLAAVTIPRDGVRLLGVRVDQLTAAAATPVQ 367 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW 400 L D+ P E + MD + + G L A + Sbjct: 368 LALDDDAAPRRE-VEVAMDDVRDRFGADALGAASLLATSAF 407 >UniRef50_C9RDA6 DNA-directed DNA polymerase n=1 Tax=Ammonifex degensii KC4 RepID=C9RDA6_AMMDK Length = 385 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 86/398 (21%), Positives = 156/398 (39%), Gaps = 25/398 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 LCD++AF+A+ E P+L GKPV+V + G V + EA++ GV+ P K Sbjct: 4 ILLCDLDAFFAAVEQRDHPELRGKPVIVGGSLTGRGVVATCSYEARSFGVRSAMPLKKAL 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L + + N Y +++ V++ +P +E+ SIDEA+ + + Sbjct: 64 RLCPQA--ILLPVNISRYREVAAEVLAIYRRFTPFIEVVSIDEAYLGVPS----GEGLAV 117 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R I+ V + L + +G++ K LAK+A AK + E +++ L Sbjct: 118 ARAIKEAVRKELDLPLSIGVSVNKLLAKVACDLAKPQGLKALW------PEEVPQVLWPL 171 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + GIG + ++L A GIKTV DLA + ++ R G L Sbjct: 172 PVGVLPGIGPKTERQLQAKGIKTVGDLAAAPLYLLKMLLGSEALRFKEYSHGVDRRGLVL 231 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P +F + + + +R A+ A +LR R ++ ++ + F Sbjct: 232 SRPPL-SFSKETTFPQDVQEPEVVRGALMRLAEDLGYRLRQNGYLARSVTLKLRFADFR- 289 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + L T I A + ++ G+ + + + Sbjct: 290 -----TVTRTRCLAEGTNRDSLIYRTAWELFQKFASSP-PWRLVGIKVAELSNWKQLS-- 341 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 + ++ L V+D L ++ GR + A Sbjct: 342 -WLEDEQEERERMLALVLDALRSRYGRPVVRRASGLKG 378 >UniRef50_Q1QXW8 DNA-directed DNA polymerase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXW8_CHRSD Length = 419 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 168/424 (39%), Positives = 228/424 (53%), Gaps = 9/424 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FYA+CE +F P L G P+ VLSNNDGCVIAR+ E KAL + MG P K Sbjct: 1 MFALIDCNNFYAACERLFEPRLEGVPLGVLSNNDGCVIARSEEFKALDIPMGIPTHKIAP 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 RR +V SSNY LY D+S RV L + P +E YSIDE F DL G+R D G Sbjct: 61 HLRRR-IVLKSSNYTLYGDLSARVQQVLAQQVPTLEPYSIDECFLDLRGMR--EDWHALG 117 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR--KLMSA 178 + +V ++ L V +GIA T+TLAKLAN AK Q V + + ++ Sbjct: 118 ATLVRSVQRQVGLPVSIGIAPTRTLAKLANRQAKT-QPTRPQVCVWQSADAPELAAHLAR 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L +VWG+G R++ +L MGI T L +T +R+ F+VVL RT EL G+ CL + Sbjct: 177 LSPREVWGVGERLNARLAGMGIVTAAALRETPDSVLRRRFSVVLARTAAELNGQACLSMG 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + ++ I+CSRSFG+ + D S+ A+ + RA EKLR + I +++T+P Sbjct: 237 DLETPRRSILCSRSFGQPLRDRASLAGALRHHCQRAGEKLRRDAMQASAIGVYMRTNPHH 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + ++ L P+ D++ + AA R L +WQ YQK GVML + + +Q Sbjct: 297 AD-SFHQACEWAALPFPSADTQQLNRAAQRLLARLWQP-AAYQKLGVMLTELTPRRQSQT 354 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 LFD P E LM DT+ A+ GR L Q WQM A S YTTR +L Sbjct: 355 TLFDGAEP-ARQEALMHAWDTIRARYGRQALTLGPQPADAPWQMNSAYRSACYTTRWDEL 413 Query: 419 LRVK 422 R + Sbjct: 414 PRAR 417 >UniRef50_A0K1P6 DNA-directed DNA polymerase n=7 Tax=Bacteria RepID=A0K1P6_ARTS2 Length = 437 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 166/425 (39%), Positives = 230/425 (54%), Gaps = 11/425 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL DVN FYAS E F P L G+P+VVLSNNDGC + R+ EAKALG+ +G+PWFK Sbjct: 18 IALVDVNCFYASAERAFDPSLEGRPLVVLSNNDGCAVTRSPEAKALGIPVGEPWFKIAPR 77 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + G+V SSNYELY D+S RVM L S +E+YSIDEAF + G + +L G+ Sbjct: 78 AKEWGLVAKSSNYELYGDISARVMELLGRYSAWLEVYSIDEAFLGVKGTPD--ELLRLGQ 135 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMSAL 179 I+ V + + V VGIA TKTLAKLAN AK GV + LM + Sbjct: 136 TIKTAVRRNVGVPVCVGIANTKTLAKLANKWAK-NNPGLNGVCHWDSMPPPAREALMGRV 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V ++WG+ R++K+L+ MGI ++LDLA D IR F+VVL RTV EL+G C+ +E Sbjct: 195 SVIELWGVAGRLTKRLNNMGIHSILDLARADPVRIRDRFSVVLMRTVLELQGTACIPMEA 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + ++I SRSF IT +RQ + Y +A+ +L + ++ F TS + Sbjct: 255 ERIGRDQLIFSRSFSTPITTAADLRQVMSVYGQQASARLAKHSLQAKVLTAFAGTSHYNP 314 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + Y S V L PT D + AA L I G +Y +AG+M+ D G Sbjct: 315 LDTSYP-SVCVTLPMPTADPVLLTRAAHALLPRIQ-EGTKYVRAGIMVTDLRPSGQQSP- 371 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRAMLSPRYTTRSSD 417 A + +++ + + GRG++ GI+ W M+R MLSPRYTT ++ Sbjct: 372 -LPVFANPHEERGIGPLLEDITRRYGRGSVGLGHAGIRGGPDWSMQRTMLSPRYTTHWNE 430 Query: 418 LLRVK 422 L VK Sbjct: 431 LPVVK 435 >UniRef50_D0WQX0 DNA polymerase IV n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WQX0_9ACTO Length = 445 Score = 293 bits (750), Expect = 8e-78, Method: Composition-based stats. Identities = 92/428 (21%), Positives = 164/428 (38%), Gaps = 38/428 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+ S E + RP+L GKPV V G V A + EA+ GV P + Sbjct: 23 ILHVDMDAFFVSVELLDRPELAGKPVAVGGAERGVVSAASYEAREFGVNSAMPVARALRA 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFG 120 ++ Y+++S ++M L +++P VE S+DEAF D+ G R Sbjct: 83 CPHLTMI--PPRPGRYSEVSRQIMDILHDVTPLVEKLSVDEAFLDVGGARRLMGGPVRIA 140 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++RA + + + VGIA TK +AK+A+ AK + L + LP Sbjct: 141 TDLRARIRREVGVPASVGIAATKHVAKIASAHAKPDG------LLLIPRSATIAFLHGLP 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEE 239 V +WG+G + +L GI+TV +LAD + + R G+ ++ Sbjct: 195 VGALWGVGEKTRARLANQGIETVGELADAGPERLARILGRAHGTHLYRLAMGQDPRPVQT 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ I +F E + D + + + + A A +LR H R ++ ++ + F Sbjct: 255 S-REEKSIGKEETFFEHVADRGKLERILLAQAHATARRLRRAHLTARTVAIKVRFADFT- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ------ 353 + S PT + D+ A D++ +G + G+ Q Sbjct: 313 -----TITRSTTFARPTDLAADLYAGAKHLFDSVAVSGEGLRLLGLRAEQIVDQREGVQL 367 Query: 354 --------------GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG-QGIQQ 398 A + P E+ +D + + G G + Sbjct: 368 ALGADSDDEAWAFGDQAGEGMRQAFGVNPRLERAEAALDRIRDRFGPSFAGPGSLIGADK 427 Query: 399 QWQMKRAM 406 + + + Sbjct: 428 ERRPEADR 435 >UniRef50_A6DHJ1 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHJ1_9BACT Length = 415 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 163/421 (38%), Positives = 227/421 (53%), Gaps = 15/421 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FYASCE F P L G+ +V+LSNNDGCVIAR+AEAKALG++MG P+F+ + L Sbjct: 10 IALADCNNFYASCERCFNPQLIGRAIVILSNNDGCVIARSAEAKALGIQMGVPFFEIRPL 69 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 GV+ +SSN+ LY D+S RVM L + +E YSIDEAF L + Sbjct: 70 VEMHGVLAYSSNFPLYGDLSARVMQLLHVHAQEIEFYSIDEAFFTLPTTHC---PESYCT 126 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 I+ V Q T + + +GIA TKTLAK+A+ AKK + L +++++ + Sbjct: 127 SIKEQVQQCTGIPISIGIASTKTLAKIASKLAKKSRGT-----FLIQEANRQQVLENTLI 181 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +D+WGIGRR+SK+L GI+T LA D +++ K F V + RT ELRG P L LE Sbjct: 182 EDIWGIGRRLSKRLQNCGIRTAWQLAMADEQYLLKRFGVCMLRTSHELRGIPSLALENSP 241 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 KQ I SR+F E + D S+ Q + +A RA +KLR E + ++ T Sbjct: 242 EAKQSIRVSRTFPESVHDLDSLLQQLSFFADRACQKLRQEQ----QKALYVDTFIEGPYP 297 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 S L +P+ + D I+A S ++ +KAGV L F S+ Q + F Sbjct: 298 TRKHRSTRFYLDSPSDYTPDFIHAVELSGQKLFHHCE-IRKAGVTLHHFSSKNAWQQDFF 356 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 LM D++N K G+G+L F G ++ + A LSPRYTT +DL V Sbjct: 357 SLPRDHQKQNTLMQQFDSINQKFGKGSLRFLSSGKRE--FSRGARLSPRYTTSWNDLALV 414 Query: 422 K 422 K Sbjct: 415 K 415 >UniRef50_C2BWE4 DNA-directed DNA polymerase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWE4_9ACTO Length = 456 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 158/427 (37%), Positives = 228/427 (53%), Gaps = 14/427 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 FAL DV++ +ASCE +F P+L+G+PVVVLSNNDGCV+AR+ EAKALG+KMG PWF+ + Sbjct: 38 FALVDVDSCFASCERIFHPELFGRPVVVLSNNDGCVVARSREAKALGIKMGMPWFQIRAR 97 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 CGVV SSNYELY +S R+M L + S VE+YSIDEAF L + R Sbjct: 98 AEACGVVARSSNYELYGSISARIMEILRQFSASVEVYSIDEAFLTL--YGRPTEFVGIAR 155 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMSAL 179 +R+ +L + V VGIA T+TLAKLA+H AK GGV + +++ Sbjct: 156 SLRSRILHDLGVPVSVGIAPTRTLAKLASHGAK-HTPALGGVASWDAYTPAQHDRILRGT 214 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + D+WGIGRR+ +L+A+GI L L + IR+ FNV L++TV EL G PC+++ E Sbjct: 215 EIADLWGIGRRLKNRLEALGITDALQLQRANPGEIRRRFNVNLQQTVLELNGVPCIEIIE 274 Query: 240 FAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + +++ SRSF + Q + Y+ +LR + + F T+ + Sbjct: 275 RDAVRTHQVMYSRSFSTPVRGVTQAYQVLSIYSQNVTHRLRRQQMTAGALWAFASTAWYK 334 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-FSQGVAQ 357 P+ SA L T D ++ AA + L Y +AG+ L D Sbjct: 335 E--PFSRISAMAPLHPRTDDPVTVLKAAAKVLLGQVDPRADYVRAGICLTDLGKPDPQEP 392 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRAMLSPRYTTRS 415 L +F + ++ +D +NA G G++ G++ W MKR MLS R TT Sbjct: 393 LPIFAPDPESRRRGKI---IDRVNAAVGEGSVGLGLAGLKAAPDWTMKREMLSNRGTTHW 449 Query: 416 SDLLRVK 422 S+L V+ Sbjct: 450 SELALVR 456 >UniRef50_B5EN92 DNA-directed DNA polymerase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EN92_ACIF5 Length = 378 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 85/365 (23%), Positives = 140/365 (38%), Gaps = 22/365 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+A+ E P+L G+PV+V + G V + EA+ G+ + + Sbjct: 15 IIHVDMDAFFAAVEQRDHPELRGQPVIVGGDPAGRGVVATCSYEARRFGIHSAMTAARAR 74 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L + V + Y + S +VM L +P VE S+DEAF D+T Sbjct: 75 SLCPQA--VFVRPRMDAYREASRQVMGILRCYTPLVEPLSLDEAFLDVTAATADGVLAVR 132 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REIRA + + T LT G++ K LAKLA+ K + + E ++ Sbjct: 133 IAREIRARIERETGLTASAGVSYNKLLAKLASEWRKPNG------LFVVPPEHGLAFLAP 186 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G KKL AMGI TVLDL + + F RG ++ Sbjct: 187 LPVGKLHGVGPATVKKLSAMGIHTVLDLRNASREVLIAQFGKAGLWFYEVARGIDSRPVQ 246 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F + + D M + A + + +L++ R +S + F Sbjct: 247 TS-RQRKSVGYERTFPQNLEDPKVMLSTLRQMAGQVSARLQALGLAGRTVSIKARFPDFE 305 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR----YQKAGVMLGDFFSQG 354 + + + II L A + GV + + Sbjct: 306 ------TVTRAHTDAQAIWRTEAIIACLPGLLAKAIPASLPMHASVRLLGVTVSGLVNVE 359 Query: 355 VAQLN 359 Sbjct: 360 AVPPE 364 >UniRef50_A3CSG3 DNA polymerase IV n=4 Tax=Methanomicrobia RepID=DPO4_METMJ Length = 360 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 91/365 (24%), Positives = 150/365 (41%), Gaps = 21/365 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D+++F+AS E P L G+PV+V G V + EA+ GV G P Sbjct: 7 IVLHVDMDSFFASIEVRRDPSLAGRPVIVGADPKGGAGRGVVSTCSYEARRYGVHSGMPI 66 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + DL V + YA +S +M+ L + R+E SIDEA+ D++ + Sbjct: 67 SRAFDLCPHG--VYLPVDRPFYASVSVEIMALLSRHAGRIEQVSIDEAYLDVSDAGSFPA 124 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 I+ V + T LT VG+A K +AK+A+ K + + + Sbjct: 125 AGALAAAIKREVREETGLTCSVGVAPGKAVAKIASDFQKPDG------LTIVRPDEVAGF 178 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 +++LPV + GIG++ + L GI TV DLA D++ + R RG Sbjct: 179 LASLPVGRIPGIGKKTGEDLRQAGILTVGDLARRDVQEVIARLGRSGVRVHHLARGIDDG 238 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 +++ + I +F D P + + A AE LR+++ CR ++ ++ Sbjct: 239 EVQ-GREGCKSISRETTFEADTADPPVLAGTLAELADDVAETLRADNLRCRTVTVKVRYR 297 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + + S L T D I AA+ L G + GV L Sbjct: 298 GFQTH------TRSRTLPRFTSDPETIRRAASGLLLPF-LNGEPVRLIGVRLSMLEGGCT 350 Query: 356 AQLNL 360 Q ++ Sbjct: 351 RQASI 355 >UniRef50_UPI0001982DE6 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001982DE6 Length = 1137 Score = 292 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 72/371 (19%), Positives = 135/371 (36%), Gaps = 23/371 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG----CVIARNAEAKALGVKMGDPWF 56 + D++ F+ S P+L KPV V +N+ + + N A+ GVK G Sbjct: 396 VIIHMDMDCFFVSVVIRNNPELQDKPVAVCHSNNPKGTAEISSANYPARDYGVKAGIFVR 455 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 K L +V F N+E Y +++++ + L + +V+ S DEAF ++ + D Sbjct: 456 DAKALCPH--LVIFPYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEVMDSKE-GDP 512 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 IR + + T T GIA +A+LA +AK + +++ + Sbjct: 513 ELLASIIRKEIFETTGCTASAGIAGNLLMARLATRSAKPNGQCY------IPVDKVDDYL 566 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCL 235 LP+ + GIG + +KL + T L +++ F + RG Sbjct: 567 HQLPIKALPGIGHVLEEKLRRRKVHTCGQLRMISKESLQRDFGTKTGDMLWNYCRGVDNR 626 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK-- 293 + + I ++G R D R + + +L+ R + +K Sbjct: 627 VVG-VIQESKSIGAEVNWGVRFNDLKDSRHFLVNLCKEVTLRLKGCGVQGRTFTLKMKKR 685 Query: 294 ------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + + S S+ + T D I AT+ + G+ + Sbjct: 686 RKDAGEPAKYMGCGDCENLSHSMTVPLATDDVDVIQRIATQLFGFFHIDVKDIRGIGLQV 745 Query: 348 GDFFSQGVAQL 358 + A+ Sbjct: 746 SRLENADTAKQ 756 >UniRef50_Q31HB8 ImpB/mucB/samB family protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HB8_THICR Length = 450 Score = 292 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 193/449 (42%), Positives = 270/449 (60%), Gaps = 28/449 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIAR-------------------- 40 +FAL D N+FY SC+ F P L +P VVLSNNDGCV+A Sbjct: 3 VFALVDGNSFYVSCQIAFEPALKNRPAVVLSNNDGCVVAANAKAKAIDAFLRQQKTHFGP 62 Query: 41 -NAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYS 99 +A M P+FK K + V FSSNYELYADMS+R+ S L + + EIYS Sbjct: 63 GGYKAARPESIMFQPYFKVKRYLDQINAVVFSSNYELYADMSSRMHSVLSGFAVQQEIYS 122 Query: 100 IDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 IDE+F DL+G+ + D T +G E++ TV+Q L V VG ++TLAKLANH AKK Sbjct: 123 IDESFLDLSGM-SLSDFTAYGEEMKRTVMQWLGLPVAVGFGSSRTLAKLANHLAKKQPDH 181 Query: 160 TG-GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF 218 + + + L+ + + DVWG+G+ +S KL+ GI + DL +D++FIRK + Sbjct: 182 QDVLDLTVLSEASLNALLKKVAIRDVWGVGKGLSAKLEMQGILSAYDLKVSDLKFIRKRY 241 Query: 219 NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 ++ LER VRELRGE CL L A + ++II SRSFG+ +T+Y M QA+ SY RAAEK+ Sbjct: 242 SITLERIVRELRGESCLSLGALATSDRQIISSRSFGQPVTEYAEMEQAVASYIVRAAEKM 301 Query: 279 RSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH 338 R++H+ C+F++ I+TSPF +Y NS ++ L+ P+ S +I A R+L +IWQ+G+ Sbjct: 302 RAQHKVCQFVTVSIRTSPFQNRSCFYQNSQTLPLIYPSDSSVLLIKLAKRALRSIWQSGY 361 Query: 339 RYQKAGVMLGDFFSQGVAQLNLFDDNAP---RPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 YQKAGV+L +G Q++ F N P S++LM VMD LN G+GT+ A +G Sbjct: 362 AYQKAGVILSGVTEKGAVQIDCFAPNPQYSANPKSDRLMQVMDFLNHSMGKGTVQLAAEG 421 Query: 396 I--QQQWQMKRAMLSPRYTTRSSDLLRVK 422 Q WQMKR+ +S RYTTR +LL V+ Sbjct: 422 RKNDQAWQMKRSKMSKRYTTRWDELLTVR 450 >UniRef50_B4WH69 ImpB/MucB/SamB family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WH69_9SYNE Length = 371 Score = 292 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 78/360 (21%), Positives = 145/360 (40%), Gaps = 19/360 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P+L GKPV V + G V A + EA+ G+ P Sbjct: 23 IIHIDMDAFYASIEQRDNPELRGKPVAVGGLPSQRGAVCAASYEARKYGIHSAMPSRSAI 82 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 + ++ +E Y +S + + + + VE S+DEA+ D++ + Sbjct: 83 TRCQH--LIFVKPRFEHYRAVSAEIRAIFFDYTELVEPLSLDEAYLDVSVDKQGIGSAVA 140 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++IR + LT G++ K LAK+A+ K + + E + + Sbjct: 141 IAKQIRDRIRTDLQLTASAGVSINKFLAKIASDLNKPDG------LSFISPEEAKTFIEQ 194 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L ++D +G+G + K+ ++GI T DL + + F V R R E + Sbjct: 195 LRIEDFYGVGPATATKMKSLGIHTGADLKTWTQAELTQTFGKVGSYYYRVARAEDNRPVN 254 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ I RSF ++ M A+ + A +++L+ + ++ IK + Sbjct: 255 P-NRIRKSIGAERSFFRDLSQIEDMETALANIATEVSQRLQKNKRQGHTLTLKIKYDNY- 312 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S L TP + + I+ ATR L + + G+ + + + Sbjct: 313 -----DTITRSRTLETPI-EEKQILQIATRLLSLHVERDRPVRLLGITVSNLIAPQPYHQ 366 >UniRef50_C0FVJ8 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVJ8_9FIRM Length = 405 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 96/410 (23%), Positives = 164/410 (40%), Gaps = 27/410 (6%) Query: 1 MFALCDVNAFYASCE----TVFRPD---LWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 + DVN+ + S E PD L V+ G V+A++ AK G+ Sbjct: 11 LIFHVDVNSAFLSWESAKRLRDNPDALDLRTINAVIGGDEKMRHGVVLAKSPSAKKYGIM 70 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + +V ++ELYA S + + LEE++P +E SIDEAFCD+TG Sbjct: 71 TGEPLSHARQKCPE--LVVVPPDHELYAASSRKFIEILEEVAPVIEQCSIDEAFCDMTGT 128 Query: 111 RNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 F +++ + + TV +GI+ K LAK+A+ K + V L Sbjct: 129 EKLYGDPIAFATKLKDRIYKELGFTVNIGISTNKLLAKMASDFEKPNR-----VHTLFPE 183 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 E K LPV+ ++G G+ +K+L ++GI T+ LA D + + +F + Sbjct: 184 EMATKFW-PLPVESLYGCGKTTAKRLRSLGITTIGALAKADRQMLLSNFKSQGDYLWESA 242 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G + +P + S + +TD + + S ++R + Y + Sbjct: 243 NGISSSAVTAESPANKGYGNSVTLPYDVTDTENAHHILLSLCETVGARIRYDKAYISVVQ 302 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 I + F + + L + T + I AA + D W + GV Sbjct: 303 VQIVDNDF------HHRCKQLSLPSATNVTEKIYEAACNAFDQGWD-HAPIRLLGVSTSK 355 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + Q NLFD + +L + +D + K G + A + Sbjct: 356 ATDESYEQYNLFDQDKF-ERLSKLNSAIDKIRDKYGDDAIVRACFADTHK 404 >UniRef50_A7REV5 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7REV5_NEMVE Length = 870 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 85/411 (20%), Positives = 147/411 (35%), Gaps = 57/411 (13%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS----------------------------- 31 + D++ F+ S P+L GKPV V Sbjct: 285 VIMHIDMDCFFVSVYVRDHPELDGKPVAVSRFNGGGGCELKSSHIVNYEMSFPTGFVADL 344 Query: 32 ----------NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 N+ + + + A+ GV+ G + + L + C ++ Y +S Sbjct: 345 TSPDKSSAFFNSMSEIASCSYAARECGVRNGMFLGQARKLCPD--ITCVPYLFDKYRQVS 402 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIA 140 R+ L S +E S DEAF D+T + + ++IRA + T GI+ Sbjct: 403 QRLYEILVSYSHDIEAVSCDEAFLDVTHSLDAGTEPMALAQQIRAEIRAATRCNASAGIS 462 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 LA++ AK + LS + + M++ D+ G+G +SKKL+ MG+ Sbjct: 463 SNVLLARMCTRIAKPDGQFY-----LSREDDVIQFMASQKAKDLPGVGWALSKKLNDMGV 517 Query: 201 KTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 +T DL ++ ++K F R RG L ++ + ++G R T Sbjct: 518 ETCADLQKLSLQALQKEFGPKTGLSLHRSCRGVDDRPLR-VERERKSVSAEINYGIRFTQ 576 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK--------TSPFALNEPYYGNSASVK 311 + I A ++LR R I+ +K F + S S Sbjct: 577 DYEGVKFIEELAGEVHKRLREVGLKGRCITLKLKVRQEGAPMPRKFMGHGICDNVSRSAT 636 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 L+ PT D+ I L + H ++ G+ + + LFD Sbjct: 637 LVEPTDDNSVIARECLNLLKTLNIPAHDFRGLGIQVSKLTNSSAGSKTLFD 687 >UniRef50_B9YCM9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCM9_9FIRM Length = 409 Score = 290 bits (742), Expect = 7e-77, Method: Composition-based stats. Identities = 97/410 (23%), Positives = 168/410 (40%), Gaps = 20/410 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAF+AS E + P L GKPVVV V + EA+ GV P + Sbjct: 16 VIYHIDLNAFFASAEILLDPSLEGKPVVVSGLTKRSVVSTASYEARQFGVHSAMPINEAL 75 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L + +V ++ Y +S + +S +++ + RVE SIDE + D++ + D Sbjct: 76 KLCPQ--LVVVKGHHGYYEQLSEQFISYVKKYTDRVEQASIDECYADMSQAIHRFPRPLD 133 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +++ +L HL +G+A K LAK+A+ K + + + + Sbjct: 134 LAWQLQQELLTDLHLKCSIGVAPNKFLAKMASDMKKPMG------ITVLRKQEVPVKLWP 187 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++D+ GIG++ + ++ A+GIKT+ DLA D +R ++ GE ++ Sbjct: 188 LPIEDMRGIGKKTAPQMKALGIKTIGDLAAADPEQLRPLLGKNTMTYIQRANGEDDREII 247 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + S + + +R A + +E++ E + +S I+ F Sbjct: 248 S-DAEIKSMSQSTTLNYDFSTEEEVRTLFRKLANKLSERMIEEDKMGTIVSISIRYFDFN 306 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDFFSQGVAQ 357 N S KL P S D+ A D + R+ GV Q Sbjct: 307 TNV------RSRKLDHPVYRSEDLFELAMELFDENYEDQPMRHLGIGVGSLSSIHDQKIQ 360 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEG-RGTLYFAGQGIQQQWQMKRAM 406 +NLF+ P L ++ LN + G L A I++ K Sbjct: 361 MNLFEAPPVDPACATLD-LISQLNQQLTLGGKLTTAAALIKKTAADKHKK 409 >UniRef50_B1YK83 DNA polymerase IV n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=DPO4_EXIS2 Length = 360 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 83/357 (23%), Positives = 143/357 (40%), Gaps = 20/357 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E RP L G PV+V + G V + EA+ G+ P + Sbjct: 6 IIHVDMDAFYASVEQRDRPHLKGVPVIVGGPPHARGVVATCSYEARKYGIHSAMPSRRAF 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTD 118 L R V +E+Y +S ++M E++P VE S+DEA+ D+T T Sbjct: 66 QLCPRA--VFVRPRFEVYRAVSAQIMELFLEVTPLVEPLSLDEAYLDVTENNLQMTSATH 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I A + +RT LT G++ +K +AK+A+ K + + + +S Sbjct: 124 IAQYILAEIKRRTGLTASAGVSNSKLVAKIASGHQKPNG------LTVLPPDAVLPFLSG 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQL 237 L + D+ G+G+ + L G TV D+ + I +R GE + Sbjct: 178 LKIGDLHGVGKVTEQTLQKHGFNTVADIQQSPIAELRGLLGRDRGTELYTMAHGEDERMV 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ I +F E D ++ + + A + L + CR ++ KT F Sbjct: 238 RP-HRERKSIGSESTFEEDTEDIDTIFETLKREALSVVKTLNQKELVCRTVTIKWKTEDF 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 S L T D ++ T+ + I +G + G+ + + Sbjct: 297 Q------SRSKRYTFLEETADEDTLLRVTTKLFNEIEFSG-PIRLIGMSVSHLEAPP 346 >UniRef50_Q0KKM4 Putative UV protection protein n=1 Tax=Plasmid pLB1 RepID=Q0KKM4_9ZZZZ Length = 420 Score = 290 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 162/419 (38%), Positives = 233/419 (55%), Gaps = 5/419 (1%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 DV FY S E +F P L G PV+VLSNNDGC +AR+ EAKAL V+MG+P FK +D R Sbjct: 6 VDVQNFYVSAERLFDPSLRGVPVLVLSNNDGCAVARSEEAKALHVRMGEPVFKIRDRIER 65 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIR 124 G+ SSNYELY+D++ R + + + S VEIYSIDE+F + + + ++R Sbjct: 66 HGMRLRSSNYELYSDLNRRFNAVIADHSDTVEIYSIDESFYRAPTLPSGLGDVEAAHKLR 125 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 +L++ L +G+ T+TL+K+AN AK ++ GGVVDL + E +R+L PV +V Sbjct: 126 EDILRQVGLPTRIGLGPTRTLSKVANALAKATEKVWGGVVDLHDTELRRRLFEKWPVGEV 185 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK 244 WGIG + +L +GI+T DLA R +VVLER VREL G C+ + Sbjct: 186 WGIGGALEARLRPLGIRTTADLAAMPPAVARDVGSVVLERLVRELNGIECVDFKLEPDAL 245 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 + +R FGE + +R+A+ AARAAEK+R++ + F S + N P Sbjct: 246 KNTAVTRQFGEPVKTLEELREAMARRAARAAEKIRAQGLVASRLIAFAHGSRYRPNPP-- 303 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 S S +L PT D R I+ + +A++Q G Y K GV+L D QG Q +LF Sbjct: 304 SASRSARLSPPTNDPRIILRIVGQMTEAMFQPGGVYTKCGVLLEDLTPQGHGQADLFAVA 363 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI-QQQWQMKRAMLSPRYTTRSSDLLRVK 422 P + L+ MD LN++ GR T+ A QG + + KR+ SP +TTR D+ + Sbjct: 364 --DPRAPALLAAMDGLNSRFGRNTIMLAAQGHGPKAFDTKRSQKSPAWTTRIKDIPIAR 420 >UniRef50_A3M2E2 DNA-directed DNA polymerase n=8 Tax=Acinetobacter RepID=A3M2E2_ACIBT Length = 436 Score = 290 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 150/424 (35%), Positives = 226/424 (53%), Gaps = 4/424 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F L DVN Y S ET F P L G+ V+VLS+NDG V+AR+ AK LG+KMG+P F+ DL Sbjct: 13 FFLVDVNNMYTSVETAFDPSLTGRSVIVLSSNDGNVVARSPAAKKLGIKMGEPLFQILDL 72 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCRDLTDF 119 R V+ SSNY +Y +MS R L E EIYS+DEAF +LT R +L Sbjct: 73 VMRNDVIVLSSNYIIYGEMSRRFHKILAEYVSPENHEIYSVDEAFLELTSYRGIYNLNQC 132 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++I+ +L+ L V VGI ++KT AK+ N+ AK + G E + + Sbjct: 133 AQDIKEKLLKLLSLPVCVGIGRSKTEAKIMNYIAKTYPHLNGICNVFDLAEVKDSIFRNT 192 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V +VWG+G + KKL M I TV DL I+ F+VVL+RTV EL G C+ +E Sbjct: 193 DVGEVWGVGSQQKKKLRLMNINTVYDLMTASPSHIQSVFSVVLKRTVLELNGISCIDIEH 252 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 PTK++I+ SR+FG+RITD +++A+ A + R+E I F ++PF Sbjct: 253 TPPTKKQIVSSRTFGQRITDIHDLKEAVIKRTQEAFTRARNEQVLVGCIIVFAYSNPFDK 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 +P+Y S PT D R ++ ATR +D ++++G ++KAGV+L + + Sbjct: 313 TKPFYKKEQSSSFAVPTDDLRLLVQTATRLMDQVYKSGIEFKKAGVILTCLEPKHTYTYD 372 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ-WQMKRAMLSPRYTTRSSDL 418 L D+ +EQLM ++ + G+ + F G + + W + + Y + Sbjct: 373 LLTDHQDLEKTEQLMKAIEEVQQIFGKNKIGFGGSMFKNRIWNLTANYQTRNYF-SFDGM 431 Query: 419 LRVK 422 +++K Sbjct: 432 IKIK 435 >UniRef50_A6NU31 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A6NU31_9BACE Length = 414 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 107/421 (25%), Positives = 169/421 (40%), Gaps = 27/421 (6%) Query: 2 FALCDVNAFYASCETVFRPDLW--GKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWF 56 CD+N+FYAS E + P+L GKPV V + G ++A+N AKA+GVK + + Sbjct: 5 ILHCDLNSFYASVELLSLPELRESGKPVAVCGDPESRHGIILAKNEPAKAMGVKTAETIW 64 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--R 114 + + +V ++ + Y S V + + + VE +SIDE++ D+TG + Sbjct: 65 QARQKCPD--LVLLPAHRDQYRKYSRIVNAIYDRFTDLVEPFSIDESWLDITGSMHLWGG 122 Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 D IR TV T LTV VG++ K AK+ + K + E R+ Sbjct: 123 DGKAIADRIRETVKAETGLTVSVGVSFNKVFAKMGSDYKKPDAT------TVITRENFRQ 176 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 L+ LPV D+ +G +K L G++T+ DLA D + + G Sbjct: 177 LLWPLPVTDLLFVGGAAAKVLRGYGVQTIGDLARFDPQALVTILGKQGAALHSYAAGTEH 236 Query: 235 LQLEEFA--PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + P + + +F + +R + + + A +LR C + I Sbjct: 237 EPVIPARDLPPPKSVGSGLTFRRNLLGLEDVRAGLSALSDEVAARLRRHGLKCTTVQVTI 296 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + F +L PT SRDI +AA L A W + V + Sbjct: 297 RDPNFR------DICRQKRLPAPTYVSRDIADAALELLLASWNLKLPIRALTVTGQNLVD 350 Query: 353 --QGVAQLNLFD--DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 QL+LF R E+L MD + K G + FA +Q +R Sbjct: 351 EADAGEQLDLFAANAAPHRDKLERLERTMDKIRDKYGGTAITFASAVRGEQGGTQRQDDV 410 Query: 409 P 409 P Sbjct: 411 P 411 >UniRef50_Q4L7K8 DNA polymerase IV n=65 Tax=Staphylococcaceae RepID=DPO4_STAHJ Length = 358 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 77/368 (20%), Positives = 140/368 (38%), Gaps = 18/368 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+A E P L GKPV+V + G V + EA+ GV P + Sbjct: 6 IIHIDMDYFFAQVEMRDNPTLKGKPVIVGGKASTRGVVSTASYEARKYGVHSAMPMSQAH 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L + ++ Y + S +MS + + VE S+DEA+ D+T + + Sbjct: 66 KLCP--NGYYVRARFDAYREASAVIMSIFKSYTDIVEPMSLDEAYLDITHLVRPDLSASK 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 IR + ++T LT G++ K LAKLA+ K + + + ++ Sbjct: 124 IATFIRRDIFEQTGLTSSAGVSYNKFLAKLASGMNKPNGMK------VIDYNNVNDILMN 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + D G+G+ K + I T DL D + + F + RG +++ Sbjct: 178 LDIGDFPGVGKASKKVMHNHDIYTGKDLYDKTEFELIRWFGKRGRGLYLKARGIDHSEVK 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F + D + Q I + + AE+L + ++ +KT + Sbjct: 238 -ATRVRKSVGTERTFSTDVNDDEEILQKIWELSGKTAERLSKLQKSGSTVTVKLKTYQYE 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 S L DI N A + + + GV +G+ + Sbjct: 297 ------TFSKQRSLREAVSRDIDIYNVAYDLYNDLKDPDVPIRLIGVTVGNLEQSRYENM 350 Query: 359 NLFDDNAP 366 ++D Sbjct: 351 TIYDFIER 358 >UniRef50_C6WDG0 DNA-directed DNA polymerase n=8 Tax=Actinomycetales RepID=C6WDG0_ACTMD Length = 430 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 98/401 (24%), Positives = 161/401 (40%), Gaps = 22/401 (5%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E RP+L PVVV + G V + N A+ GV+ P + L Sbjct: 31 LHVDMDAFYASVEIRDRPELARLPVVVGGTAHRGVVASANYLAREFGVRSAMPTAHARRL 90 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDF 119 V ++ Y D+S VM +++P VE S+DEAF D+ G + Sbjct: 91 APHA--VFLPPDFTKYRDVSRGVMELFRQVTPLVEPLSLDEAFLDVGGALRRLRATPAEI 148 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +R V + +T VG+A TK LAKL++ K + + +R + + L Sbjct: 149 AARVRVDVEREHGITCSVGVASTKFLAKLSSGMCKPDG------LMVVPKDRALEFLHPL 202 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 PV +WG+G+R +++LD +G++TV D+A + +RK V E RG + Sbjct: 203 PVGALWGVGKRTAEQLDRLGLETVGDVAAAPLLRLRKAVGVALAEHLYALARGHDDRPVV 262 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + I +F D ++ + + R A LR++ R +S ++ + F Sbjct: 263 PYTRE-KSIGAEETFEVDHFDRAVLKLELLRLSERTAASLRAKGLRGRTVSIKVRFADFT 321 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S L T +R++ AT LD G + GV + + Sbjct: 322 ------TITRSKTLRVATDVAREVYATATSLLDDHVPPG-AVRLIGVRVEQLSEGAAGEQ 374 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 FD D + G + A Sbjct: 375 LAFDAPERGWREA--EQAADQARTRFGTAAVRPASLLSTAP 413 >UniRef50_C6XT23 DNA-directed DNA polymerase n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XT23_PEDHD Length = 385 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 79/395 (20%), Positives = 148/395 (37%), Gaps = 21/395 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D+++F+ S E L GKPV+V ++ G V + + EA+ GV P + Sbjct: 7 IIHMDLDSFFVSVEIKKNSKLAGKPVIVGGLSDRGVVTSCSYEARKYGVHSAMPSRLARQ 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L N + Y++ S V L++ P +E SIDE + D+TG+ F Sbjct: 67 LCPHAE--FVRGNMDDYSEHSRMVTEILQQKVPVLEKASIDEHYIDMTGMERFYGCMKFA 124 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 RE++ V + + L V G++ KT++K+A + K + ++ L Sbjct: 125 RELKEQVFKESGLPVSFGLSVNKTVSKIATNECKPNGALQVEQL------EIPSFLNPLS 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + + G+G KL MG++ + A + + K ++ G + + Sbjct: 179 IKKIPGLGAATFLKLSEMGVRKIHTFAQIPQQQVYKVLGNNGLSLWQKAHGIDHTPVIPY 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ I ++F D+ +RQ I A +LR + + ++ I+ S F Sbjct: 239 -REQKSISKQQTFESDSIDFTQIRQLITGMVIELAYELRKQQKLTACVTIVIRYSNFETI 297 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 T +I A + + + G+ L G Q++L Sbjct: 298 TQQCRI-------PYTALDDTLIVKAKELFERAYTRRMLIRLVGIKLSALV-NGYEQIDL 349 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 + + L MD + + G + A Sbjct: 350 YSAS---EEKYNLYQAMDKIRNRYGEKAIALASTL 381 >UniRef50_D2NU69 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Rothia mucilaginosa RepID=D2NU69_9MICC Length = 479 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 89/383 (23%), Positives = 160/383 (41%), Gaps = 25/383 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AF+ + E + P L G+P++V V + + EA+A GV+ G P + + Sbjct: 27 VIMHLDMDAFFVNVELLENPALRGEPIIVAPLGPRSVVCSASYEARAHGVRSGMPLSRAR 86 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTD 118 +L V+ + Y S VM+ L +LSP VE S+DEAF DLTG + +D Sbjct: 87 NLSPNATVLPLRGD---YRHYSRAVMAILNDLSPYVEQVSVDEAFVDLTGAYLHGQDPVA 143 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + R + Q L G+A K LAK+A+ +K + + ER ++ + Sbjct: 144 LAQSARDRIAQELSLPSSAGVAPNKLLAKMASTGSKPNG------LWVIPPERVQEFLDP 197 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQL 237 V ++WG+G + +++L GI T+ + + ++++ F E RG + Sbjct: 198 RKVSNLWGVGVKSTEQLSRYGIHTIAQMRSMSLDWLKERFGTAQGEHLWAMARGIDERPV 257 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F TD + AI + + ++LR+ + +S I+ S F Sbjct: 258 VTE-REEKSMGGEHTFETDTTDAQEVSAAIRELSLKLGKRLRAAGKLAGGLSLKIRYSTF 316 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-----AGHRYQKAGVMLGDFFS 352 + + ++ L P I + A +L A A + GV Sbjct: 317 ETH------TRAIALNVPVDSGMQIASLALEALRADEILVGQAAPRALRLIGVRAEKLAH 370 Query: 353 -QGVAQLNLFDDNAPRPGSEQLM 374 + Q LFD S + Sbjct: 371 AEDGVQQTLFDSIESGANSRSIQ 393 >UniRef50_B3T119 Putative impB/mucB/samB family protein n=1 Tax=uncultured marine microorganism HF4000_008B14 RepID=B3T119_9ZZZZ Length = 380 Score = 289 bits (739), Expect = 1e-76, Method: Composition-based stats. Identities = 82/368 (22%), Positives = 147/368 (39%), Gaps = 18/368 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYA+ E + PDL GK V+V N G V + EA+ G+ P Sbjct: 20 VLHADLDAFYAAVEVLDDPDLAGKAVMVGGDPENRGVVATASYEARVFGIHSAMPMRTAV 79 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L ++ ++ Y +S VM + + VE S+DEA+ D+T + Sbjct: 80 RLCPHGIIIH--PRFDRYRQLSRAVMDVFHDFTELVEPLSMDEAYLDITEAVDAGRLPLA 137 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E++ V + LT+ VG +K++AK+A+ K + + +R+ ++ Sbjct: 138 IALELKNRVHENIGLTLSVGAGTSKSVAKIASDLHKPDG------LVVVAPGEEREFLAP 191 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L V +WGIG + ++L A GI+T+ DLA + ++ F GE + Sbjct: 192 LAVGKLWGIGPKTGQRLRADGIETIGDLASQSTGWFQRRFGKRALDVQSRAMGEDREPVR 251 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + +F ++ ++ + A R A+ L + + ++ + + F Sbjct: 252 TE-REAKSVSAESTFATDLSGEGTLYPHLSRLAGRVAQHLEGKQLKGKTVTVKARLADFT 310 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + L PT I+ A R G ++ GV + F QL Sbjct: 311 ------TFTRQTTLPYPTGSDTVILETAWRLFSRELTPGRSFRLLGVGVSGFTEDEEFQL 364 Query: 359 NLFDDNAP 366 LF + Sbjct: 365 PLFGEEQM 372 >UniRef50_Q73P36 DNA polymerase IV n=2 Tax=Treponema RepID=DPO4_TREDE Length = 395 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 84/406 (20%), Positives = 165/406 (40%), Gaps = 19/406 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 +F D++AF+AS E + P+ GKPV+V + G V + EA+ GV P + + Sbjct: 6 VFFHVDIDAFFASVEQLDNPEYMGKPVIVGGQSERGVVSTCSYEARKFGVHSAMPILQAR 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + + Y + S VMS ++ +P ++ S+DEAF ++TG+ + Sbjct: 66 KLCPSG--IFLRGRMDRYHEKSKEVMSIFKDFTPEIKQISVDEAFLNMTGMEKIFGTPKN 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++ T+ + T LTV VG AQ K +AK+A+ +K + + + M + Sbjct: 124 SALLLKKTIKEETGLTVSVGCAQNKYIAKIASGRSKPDG------LFIVKAGEEIDFMKS 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQL 237 LP+ DVWG+G + ++L A G+ +V + ++ ++ + +RGE + Sbjct: 178 LPLKDVWGVGGKTRERLIAAGLTSVPQIFNSSEHLLQSILGNASGSFLFQAVRGEL-YDV 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 I R+F + + + + A+ ++ E + +S I+ + F Sbjct: 237 FSDDVKSHSISTERTFEHDLFSHAEIDDVMFYLASELMYRIFDEKVKGKTVSVKIRYNDF 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + D++D+ A + + G+ + + S Sbjct: 297 TTVSVQSTGAV-------VNDTQDLFERARELFYKKFDNKTPIRLLGLCIMNIESDIPEA 349 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 + ++ M TL KEG+ L A + + ++ Sbjct: 350 QTELFYSEKNVKKRKIEETMYTLTKKEGKNILKPARLLKKDKDGLE 395 >UniRef50_Q8UJK7 DNA polymerase IV 2 n=3 Tax=Bacteria RepID=DPO42_AGRT5 Length = 357 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 82/378 (21%), Positives = 146/378 (38%), Gaps = 26/378 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIAR-NAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P+L G+PV V S V+A + EA+ GV+ P Sbjct: 4 IIHVDMDAFYASVEQRDNPELRGRPVAVGSAAARGVVAAASYEAREFGVRSAMPSVTAAR 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 ++ +++Y +S ++ + E + +E S+DEA+ D+T + T+ Sbjct: 64 RCPD--LIFVPPRFDVYKAVSQQIRAIFAEYTRLIEPLSLDEAYLDVTENLKGMEIATEI 121 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIR + Q T L GI+ K LAK+A+ K + + + + L Sbjct: 122 ASEIRERIKQITGLNASAGISYNKFLAKMASDLNKPNGQA------VITPKNGPAFVEQL 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V G+G ++K+ GI+T DL ++F+ +HF RG Q+ Sbjct: 176 AVKKFHGVGPATAEKMHRFGIETGADLKSKSLQFLAEHFGKSGAYFYGIARGIDERQVRP 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + +F I D + A + ++ + ++ +K S F Sbjct: 236 -DRIRKSVGAEDTFSVDINDLDLATAELRPLAEKVWHHCEAQRVSGKTVTVKVKYSDFT- 293 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S P ++I+ AA+ L ++ + GV L + Sbjct: 294 -----QATRSRTSALPVNGIQEILEAASALLATVYPFRRSVRLLGVTLSSLTN------- 341 Query: 360 LFDDNAPRPGSEQLMTVM 377 D A QL + Sbjct: 342 --DQEAEDEEQPQLDLAL 357 >UniRef50_B2GJQ9 DNA polymerase IV n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GJQ9_KOCRD Length = 412 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 94/394 (23%), Positives = 160/394 (40%), Gaps = 20/394 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++ FY E + P G+PV+V + V++ + EA+ GV P + + Sbjct: 17 ILHVDMDMFYVGVELLDAPQHRGRPVIVAGSGPRSVVLSASYEARRFGVHSAMPVSQARA 76 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-DF 119 V + E YA S VM ++ RVE S+DEAF D++G + Sbjct: 77 RCPSA--VLLEPHREAYAHYSRIVMDIFRSVTDRVEQLSVDEAFVDVSGAIRRCGPPVEI 134 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R +R T+ QRT LT VG+A+ KT+AK+A+ K + + E R ++ L Sbjct: 135 ARGLRRTIQQRTGLTASVGVAENKTVAKIASAHCKPDG------LLVVAPEHTRAFLARL 188 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 PVD +WG+GRR S+ L A G+ TV D+A T + + V + G + Sbjct: 189 PVDRLWGVGRRTSETLRAAGLATVGDIAGTPLPRLHALVGVASGSHLQQLALGHDPRPVT 248 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F +++ +++ + A +LR + ++ + F Sbjct: 249 PT-REEKSLGAERTFQTDLSETAELKRVLLGLCHETAARLRRHGLRAGRVGLKLRYADFT 307 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 S S L P + D+ A LDA+ + + G+ A Sbjct: 308 ------TISRSRTLGHPVTSAHDLYTEAAGLLDALGRRPQAVRLVGIRAEKLVGADHALQ 361 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 + MD ++ + G GT+ A Sbjct: 362 --LSLDGRDAEWGAAEEAMDRVHHRFGPGTVRPA 393 >UniRef50_C0LIJ7 Putative DNA polymerase V subunit UmuC n=1 Tax=Acinetobacter sp. NFM2 RepID=C0LIJ7_9GAMM Length = 429 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 148/418 (35%), Positives = 229/418 (54%), Gaps = 6/418 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +F D+N+ Y S E + P L GKP VVLS+NDG +IAR+AEAK L + MG P FK +D Sbjct: 5 VFIHVDINSAYCSMEAFWNPKLKGKPCVVLSSNDGTIIARSAEAKLLKIPMGAPLFKVQD 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRDLTD 118 + + V SSN+ LY +MS R L IYSIDE F + T D T+ Sbjct: 65 IINKHNVHVLSSNFALYGEMSRRFHGILSGFVDPSCYSIYSIDEGFIEFTQFTKNFDATE 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE--RQRKLM 176 REIR V + LT VG+ +T T +K+AN+ AKK G+ +L + Sbjct: 125 MAREIRHQVYKFIGLTTCVGVGRTLTESKMANNLAKKNPE-LNGICNLVTMSLVDVESYY 183 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 ++PVD++WG+GR+ +KKL+ MGI +VLDLA ++ +R+ FNV ++ T+ EL G+PC + Sbjct: 184 QSMPVDEIWGVGRKYAKKLNDMGILSVLDLATSNPNRMRELFNVNMQSTILELLGQPCFE 243 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 E KQ+I+ S+SFG++IT+ +++AI Y A +L +EHQ C + F++++P Sbjct: 244 FESSPKAKQQIVSSKSFGQKITELSILQEAISKYTHNAFNRLVAEHQLCGSLIVFLQSNP 303 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F ++PYY S + PT + ++ AAT +D +++ G ++K GVML + + Sbjct: 304 FDQSKPYYSKSLTYTFTQPTNNLMQLVKAATSLIDKLYKEGIEFKKCGVMLCELIKEEHR 363 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ-GIQQQWQMKRAMLSPRYTT 413 + L D + LMT + +K G+ + + W+ K S Y + Sbjct: 364 TIGLLTDVEQLEKEQALMTAFQNIQSKFGKAKIAAGSCNLKNRDWEPKSERQSRNYFS 421 >UniRef50_Q8VMP6 RuvB protein n=4 Tax=Pseudomonas RepID=Q8VMP6_PSEPU Length = 402 Score = 288 bits (736), Expect = 3e-76, Method: Composition-based stats. Identities = 177/398 (44%), Positives = 243/398 (61%), Gaps = 4/398 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +F L DVN+FY SCE +FRP+L +PVVVLSN+DGC++AR EAKALG+KMGDP+FK ++ Sbjct: 9 IFGLVDVNSFYCSCERIFRPELRHRPVVVLSNSDGCIVARTNEAKALGLKMGDPYFKVRN 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + GV FSSNY LY ++S+RV + L P E YSIDE F +L G+ + D G Sbjct: 69 FLEQNGVAVFSSNYTLYGELSHRVGVAIASLVPEWEQYSIDELFVNLDGLPEP--IIDVG 126 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R I+A VLQ T L VGVGI TKTLAK A HA+K W+ +TGGVVDL + L+ +P Sbjct: 127 RAIQARVLQWTALPVGVGIGHTKTLAKAAQHASKVWREKTGGVVDLRKPDAVEWLLRRMP 186 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 VD+VWGIG R+ L GI T +L+ D R + + ++VVLERT+REL+GE C+ LE+ Sbjct: 187 VDEVWGIGSRMRDNLARDGITTAWELSQADARAMGRKYSVVLERTIRELQGESCMDLEQT 246 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 KQ I S+ FG+R+ +++A+ +Y RAAEKLR + C + I+TS F + Sbjct: 247 VAPKQTICSSKMFGQRVHTLQGLQEALATYIHRAAEKLRLQRSLCGAMRIGIQTS-FHGD 305 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y N+A+ PT D R + A ++ + I++ G Y KA V+L D +G +L Sbjct: 306 GPKYANAATCIPAYPTDDVRQLTKYALQAAEQIYRPGFAYSKAEVLLLDLRKRGEYTQDL 365 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 F + P S+ LM MD +N + G L A Sbjct: 366 FSPSQP-ERSDALMATMDKINRRWGHDCLRTAAGATDP 402 >UniRef50_B6WBQ9 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WBQ9_9FIRM Length = 399 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 82/405 (20%), Positives = 159/405 (39%), Gaps = 21/405 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFKQ 58 D+N+ YAS E P L K + V N G ++A++ EAK +GVK G+ ++ Sbjct: 5 ILHSDMNSCYASIEAKLNPKLKNKAMAVCGDPRNRHGIILAKSQEAKIMGVKTGEAIWQA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 K ++ +YE Y + S + + RVE + +DE + D++ Sbjct: 65 KIKCP--NLILVPPHYEKYLEFSRKARKIYYSYTNRVEPFGLDECWLDVSESLKLFGSGE 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + +IR + + +TV VG++ K AKL + K L E ++++ Sbjct: 123 EIANQIRERMKKELGITVSVGVSFNKVFAKLGSDLKKPDAT------TLIKKENFKEIVW 176 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L + + GIG+ +KL+ +GI ++ DLA TD IR + + G + Sbjct: 177 PLDISSIIGIGKATKRKLNGIGIYSLGDLAKTDSDAIRGILGINGLYLWQYANGLDDRPV 236 Query: 238 EE--FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ + + I S + E + + + +++LR + ++ F++ + Sbjct: 237 KDYSYREVIKTIGNSSTLVEDLYTNEEVYNIFQILSLNVSKRLREANLSSMGVNIFVRDN 296 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG- 354 + + PTQ S + A ++ + G+ + Sbjct: 297 N------LFSYEFQSPINNPTQSSIILSEKAIDLFKKKYKWNFPIRALGIRAINLVDDKI 350 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 AQ ++F D E L + + K + L FA ++ Sbjct: 351 PAQTDIFSDYKKIIKKENLDKAIYDIRKKYNKDVLTFASLKNNKK 395 >UniRef50_C8WRW0 DNA-directed DNA polymerase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRW0_ALIAD Length = 409 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 87/404 (21%), Positives = 152/404 (37%), Gaps = 26/404 (6%) Query: 7 VNAFYASCETVFRPD-LWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 +NAFYASC P GKP+ V + G V+ + EA+A GVK P + Sbjct: 1 MNAFYASCHAAVDPARYAGKPIAVAGDPSTRHGIVVTASYEARARGVKPPMPVHQALARC 60 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 ++ ++ LY + +V + + E +P VEI SIDE + D+T V R Sbjct: 61 PE--LIVVRPDFHLYRAYARKVFAIVREFTPDVEIVSIDECYADVTHVPGGDRPVHLARA 118 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 I+A +L L +G+A K LAK+A+ K + E R L+ L ++ Sbjct: 119 IQARLLDSLGLPSSIGVAPNKFLAKMASDMKKPMG------ITELRSENIRSLLWPLAIE 172 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 + G+G +K+L +GI T+ DLA + + + G LE Sbjct: 173 HMHGVGPSTAKRLRRLGILTIGDLAVQSLDVLARALGPRAAELKARANGIDPRPLETEPQ 232 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 + + S + + + + + R A ++R R ++ ++ + Sbjct: 233 PPKSVGHSMTLAKDAQTFAEVEGVVMDLCDRVASRMRRYGLMGRVVAVAVR------DRR 286 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF- 361 + L T + + ++ AA IW + GV + + + L Sbjct: 287 MRTSRHQDTLATYVRHTGELFQAARALFQRIW-PTEPVRLLGVSVEGLVPRDGQGVQLHL 345 Query: 362 ------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 E+L +D + AK G + Q+ Sbjct: 346 WDAVPTAGEPRDERLEKLERAIDEVRAKFGPSAIRLGRSLSGQR 389 >UniRef50_C8P3H3 DNA polymerase IV (Pol IV) n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3H3_ERYRH Length = 406 Score = 287 bits (733), Expect = 8e-76, Method: Composition-based stats. Identities = 87/407 (21%), Positives = 163/407 (40%), Gaps = 24/407 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 CD++ +A E + P L P+ V + G V+ARN AKA GVK + + Sbjct: 6 ILHCDIDYCFAQIEIMKNPSLADVPMCVGGDESKRHGIVLARNPIAKAKGVKTAETLNEA 65 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 + G+V +++ Y +SN+V E + +VE + IDEA+ D++ Sbjct: 66 RRKCP--GLVIVPPSFDDYLTISNQVKDIYREYTDKVESFGIDEAWVDISDSLLLFGKPG 123 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D EIR + LTV +G++ K AKL + K + + + ++ Sbjct: 124 DIATEIRKRIKTEIGLTVSIGMSFNKIFAKLGSDLNKPDG------LTILMESHVKSMIW 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV D+ +G K L+ MGI+T+ DLA D + H + G+ ++ Sbjct: 178 PLPVQDLLYVGPSTQKSLNKMGIRTIGDLACADENQLHTHIGKMGSLLKSFANGDDTSEV 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + + + + +R+ + A + + R+ + + I+ + Sbjct: 238 NPHTDPAKSVGNGMTTPQDLVSIEEVRRVLFVLAESVSSRCRNIEKKGSVLRICIRNNQL 297 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-QGVA 356 S KL PT I+N + ++ W + + L D S Sbjct: 298 E------TLSRQKKLNQPTNTVDQIVNESLFLIERYWDQKQPLRSITITLSDLVSTTQPI 351 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 QL+LFD++ + +D++ + G + A +Q+ + + Sbjct: 352 QLSLFDESVS-----AIDETIDSIRDRFGHHAIKRANVLLQKNLEKR 393 >UniRef50_D2MQ51 Putative DNA polymerase IV n=1 Tax=Bulleidia extructa W1219 RepID=D2MQ51_9FIRM Length = 395 Score = 287 bits (733), Expect = 8e-76, Method: Composition-based stats. Identities = 104/409 (25%), Positives = 172/409 (42%), Gaps = 26/409 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQK 59 ++ D+NAF+AS E + P L GKP+VV V + EA+A G+ K Sbjct: 4 IYFHVDLNAFFASAEILRDPSLKGKPIVVSGQTKRSVVSTASYEARAYGIHSAMSIILAK 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L ++ +Y Y +S+ M+ + SP +E SIDE + D+T V D Sbjct: 64 KLCPDLEII--EGHYSYYRSLSDEFMTIVRSFSPYMEKASIDECYVDVTDVIQQYKHPLD 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++ + Q+T L +GI LAK+A+ K + + + + Sbjct: 122 LAVLLQKAIYQKTGLGCSIGIGPNLFLAKMASDMKKPMG------ITVLRIRDVEAKLWP 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLA-DTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV + GIGR+ K++A+GIKT+ DLA I+ + K F + + + RG L Sbjct: 176 LPVHKMRGIGRKTLPKVEALGIKTIGDLANYQPIQDLGKIFKNSTDSLLEKCRGIDRTPL 235 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E ++ + S + E I+DY +R + S + + +L E + R IS I F Sbjct: 236 -ELDWQRKSLGVSETLLEDISDYEELRGLLRSLSKKLHHQLEKEKRIGRAISIRITYYNF 294 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV-- 355 S S+ + DI + A + D W+ + G+ + DF + Sbjct: 295 R------NVSRSLSVKQGIYLEPDIFDLALQLFDQYWEYDEPVRLLGITITDFMDEHQAI 348 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 QLNLF++ P ++D +N L Q + +R Sbjct: 349 QQLNLFEEEKIDPTQ----QIIDEINRLTSIPLLKRGNQAKTK--GKRR 391 >UniRef50_A0M5X6 DNA polymerase IV n=19 Tax=Bacteroidetes RepID=A0M5X6_GRAFK Length = 406 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 84/395 (21%), Positives = 157/395 (39%), Gaps = 21/395 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++ F+ S E P+L KPV+V + G V A + E + GV G P + Sbjct: 7 IIHLDLDTFFVSAERREHPELNKKPVIVGGLGDRGVVAACSYETRNFGVHSGMPMKVARQ 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L V+ N +Y S+ V + P E S+DE + DLTG+ + F Sbjct: 67 LCPAATVI--KGNASIYTKFSHEVTEVIRSKVPSFEKASVDEFYADLTGMDRFFGINQFA 124 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +E++ ++L+ T L + G++Q K ++K+A K + ++ + + ++ ++ LP Sbjct: 125 KELQQSILKETRLPISFGLSQNKIVSKIATGEGKPYAQK------IIDPGTEKNFLAPLP 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ + +G + +KL +GI+ + + + + + G + F Sbjct: 179 VNKIPMVGNKTFQKLLNLGIRRIETIQKMPVEVLESVLGKNGRTIWKRAHGIDNPPIIPF 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ I R+F D + + + A A +LR ++ +S I+ S F Sbjct: 239 H-ERKSISTERTFNRDTIDMVRLHATLVAMAESLAYQLRRGNKLTSNVSVRIRYSDFQ-- 295 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 S K+ T +I ++ + GV G Q+NL Sbjct: 296 ----TYSKQAKIS-YTSADHILIPKVEELFKQLYSRRMLIRLIGVRFSGLV-GGHYQINL 349 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 FDD+ L MD + + G ++ A Sbjct: 350 FDDSEEML---SLYNSMDKIKKRFGEHSVMRAVSM 381 >UniRef50_Q97MB3 DNA polymerase IV n=1 Tax=Clostridium acetobutylicum RepID=DPO4_CLOAB Length = 396 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 91/407 (22%), Positives = 171/407 (42%), Gaps = 25/407 (6%) Query: 1 MFALCDVNAFYAS---CETVFRPD---LWGKPVVVLS---NNDGCVIARNAEAKALGVKM 51 + DVN+ + S E + + + P V+ + G V+A++ AK G+ Sbjct: 4 VIFHVDVNSAFLSWTAVEKLKNGEDIDIRKVPSVIGGDEKSRHGVVLAKSTPAKKYGIVT 63 Query: 52 GDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR 111 G+ + + ++ F ++ Y S +M+ L+ +P +E YSIDE F D+T Sbjct: 64 GESLYHARKKCP--NILVFPPRFDTYRKASESMMNLLKRFTPHIEKYSIDECFMDVTNDL 121 Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + +F I+ + TV VGI+ + LAK+A+ K + T Sbjct: 122 RGMESVEFASIIKERIKNELGFTVNVGISTNRLLAKMASELNKPDKINT------LYKHE 175 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + M LPV +++ +G+ + +KL+ + IKT+ +LA D+ ++ F G Sbjct: 176 IKDKMWPLPVGELFMVGKSMKRKLNELHIKTIGELAKYDVNILKAKFKSHGNMVWEYANG 235 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + + + I + +TD + + + + ++LR ++YC IS Sbjct: 236 IDNSDISRYRDEIKCISNETTLSMDLTDTEKIHKILVTLCENLGQRLRDANKYCTSISVN 295 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 I+TS F S KL +RDII A + + +W + GV L Sbjct: 296 IRTSDFR------NYSHQKKLKNAVSSTRDIILYADKIFNEMW-GREPIRLLGVQLSGLC 348 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 S Q+++FD+ +E L +D++ K G + + ++ Sbjct: 349 SGSSVQISMFDE-KTDTRNEILDKTLDSIRKKYGDNVIMRSVLLEKE 394 >UniRef50_C1A1E2 DNA polymerase IV n=28 Tax=Actinobacteria (class) RepID=C1A1E2_RHOE4 Length = 432 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 98/404 (24%), Positives = 162/404 (40%), Gaps = 24/404 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D+++FYAS E P L G+PV+V V+A + EAKA GV+ + + L Sbjct: 38 ILHADLDSFYASVEQRDDPTLAGRPVIVGGG---VVLAASYEAKAFGVRTAMSGGQARSL 94 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFG 120 + + Y+ S V + SP VE SIDEAF ++ G+ + G Sbjct: 95 CPQA--IVVPPRMSAYSQASKDVFDVFHDTSPLVEGISIDEAFLEVGGLAKIVGNPLQIG 152 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +R V ++ L + VGIA+TK LAK+A+ AK E + + + LP Sbjct: 153 ANLRRDVAEQVGLPITVGIARTKFLAKVASAFAKPDGLLR------VPPEGETEFLHPLP 206 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEE 239 V+ +WG+G+ + KL I TV D+A D I + Sbjct: 207 VEKLWGVGKITAHKLRNFDIVTVGDIARHDESSIVSILGGGAGRHLYALSHNRDPRPVRA 266 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + + + G + ++ S R + ++RS + R ++ ++ + F Sbjct: 267 Y-RGRSSMGAQHALGRGSHSRAELDASLMSLVDRVSRRMRSAQRTGRTVTLRLRFADFT- 324 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVAQ 357 + S L T D+ +++NA+ LD A GV + + G Q Sbjct: 325 -----RATRSHTLRRSTADTAELLNASMVLLDEAVPMIADKGITLIGVAVSNLDRDGAEQ 379 Query: 358 LNL-FDDNAP-RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 L L FD P + L + MD++ K G L + Sbjct: 380 LELPFDGPGFAGPDTVALDSAMDSVRKKFGSAALTRGVLLGRDP 423 >UniRef50_C6NY09 DNA polymerase IV n=2 Tax=Bacteria RepID=C6NY09_9GAMM Length = 390 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 83/354 (23%), Positives = 143/354 (40%), Gaps = 18/354 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+A+ E RP+L G PV+V N G V + EA+ G++ + + Sbjct: 31 IIHVDMDAFFAAVEQRDRPELRGLPVIVGGDPNVRGVVATCSYEARRFGIRSAMSAARAR 90 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + + + Y ++S +VM+ L + VE S+DEAF D+T + Sbjct: 91 SLCPQA--IFVRPRMDAYREVSRQVMTILRSYTALVEPLSLDEAFLDVTAATTDGTLAVE 148 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REI + + T LT G++ K LAKLA+ K + + ER ++ Sbjct: 149 IAREILDRIHRETGLTASAGVSYNKLLAKLASDWRKPHG------LFVIPPERGLAFLAP 202 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G KKL AMG++TVLDL + + F+ HF R ++ Sbjct: 203 LPVGKLHGVGPATVKKLSAMGVETVLDLRNLSLEFLVTHFGKSGGWFYDVARAIDERPVQ 262 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F + + D M + AA+ A +L+ H + + F Sbjct: 263 PS-RQRKSVGTERTFSKNLADRSVMLTTLQEMAAQVAARLQVLHLAGHTVHIKARFPDFT 321 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + + + I LD + G+ + + Sbjct: 322 ------TVTRAYTATEGIGSADAIAAWLPELLDRAVPKSTSVRLLGITMSGLVN 369 >UniRef50_B7AQS7 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AQS7_9BACE Length = 413 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 94/419 (22%), Positives = 169/419 (40%), Gaps = 28/419 (6%) Query: 1 MFALCDVNAFYASCETVF-----RPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMG 52 +F DVN+ + S + DL V + G V+A++ A GV+ G Sbjct: 4 VFFHVDVNSAFLSWSALKLLKEGHDDLRLIASCVGGDEKSRHGIVLAKSILAAQAGVRTG 63 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 +P + + G+V ++ Y S +++ ++E +P VE YSIDEAF D+TG++ Sbjct: 64 EPLYMARKKCP--GLVTVKPQFDWYVKNSRAMIAIMQEFTPDVEQYSIDEAFLDMTGMQT 121 Query: 113 CRDL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + ++ + TV +GI+ + LAK+A+ K + T + Sbjct: 122 LMGPPLEAAARLKDRIRDELGFTVNIGISSNRLLAKMASDFEKPDKIHT------LFPDE 175 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 K M LPV ++G+G+ +K L+ MG T+ D+A D + + + G Sbjct: 176 IDKKMWHLPVGSLFGVGKSTAKALNNMGFYTIGDVAAADRGLLVSKLGKMGDMAWNYANG 235 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + + + S + GE ++ I S A A +LR++ + ++ Sbjct: 236 IESVAIVRHEAKENSYGNSVTTGEDVSSIDVALGIIMSLAESVALRLRTDGKKAGVVTVT 295 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + + F + S L PT + I A + L +W+A + G+ G Sbjct: 296 LVDTEFNRH------SHQCSLEYPTNTTDVIYENAQQLLYEMWKADRPVRLIGISAGKAA 349 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPR 410 + Q++LF D ++L MD + K G + A + K LS Sbjct: 350 HEEFEQMSLFAD-ERTDKLKKLDAAMDEIRNKFGEEAVVRARLLGSE----KHERLSKA 403 >UniRef50_Q6AL48 DNA polymerase IV n=1 Tax=Desulfotalea psychrophila RepID=DPO4_DESPS Length = 376 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 84/377 (22%), Positives = 141/377 (37%), Gaps = 18/377 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+AS E RP+L KP++V G V EA+ G+ + Sbjct: 6 IIHIDMDAFFASIEQRDRPELRKKPLIVGGLPRGRGVVATCCYEARRYGIHSAMSANRAY 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L V LY ++S ++M+ E + +VE S+DEAF D+T T Sbjct: 66 KLCPHA--VFVKPRMVLYKEVSLQIMAIFREYTKKVEPLSLDEAFLDVTEYLQINGSATL 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REI A + RT L+ G++ K LAK+A+ K T E R+ + Sbjct: 124 LAREICALIKLRTDLSASAGVSYNKFLAKIASDLKKPGGIST------VPPEEARQFIDR 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + +G+G+ K+ ++GI+T DL F+ K F RG + Sbjct: 178 LSIGKFYGVGKITKSKMQSLGIQTGKDLRQYSKDFLMKRFGKAGSFFFYNARGLDERPVC 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + ++ I + + +R + + ++ + L + Q + ++ I+ S F Sbjct: 238 PYQN-RKSIGKETTLVQDTNRPEEIRDILINLSSLLGKALENNSQLAQTLTLKIRYSDFT 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S+ L P DI L + G+ L G A Sbjct: 297 ------TTTRSLSLQKPFSCPADIEECLPSLLTNCNLTHKPIRLLGISLSKLTYIGSAPR 350 Query: 359 NLFDDNAPRPGSEQLMT 375 + S L Sbjct: 351 PIPLPFPKDRRSNCLNR 367 >UniRef50_B1CA62 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CA62_9FIRM Length = 413 Score = 285 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 91/404 (22%), Positives = 169/404 (41%), Gaps = 28/404 (6%) Query: 1 MFALCDVNAFYASCETVFRP-------DLWGKPVVVLSN---NDGCVIARNAEAKALGVK 50 + DVN+ + S + + DL P V + G V+A++ +AK GV+ Sbjct: 8 IIFHIDVNSAFLSWQAAYNKKMGNKEVDLRSIPSAVGGDEAKRKGVVLAKSQKAKKYGVR 67 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+ F+ + ++ N+++Y SN++ L E S +E YSIDE F D T Sbjct: 68 TGESLFEARKKCP--NLLIVKPNFKIYRMYSNKLFDLLSEYSDTIERYSIDECFLDYTSS 125 Query: 111 RNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + EI+ + + TV +GI+ K LAK+A K + V+ L Sbjct: 126 QKLFGEPIKAAYEIKERIKRELGFTVNIGISNNKLLAKMAGDLKKPDK-----VITLFPE 180 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRE 228 E + K++ L +++++ +GR+ +KL+++GIKT+ DL + F+ +F Sbjct: 181 EIEEKML-PLTINELFMVGRKTKEKLNSLGIKTIGDLNKCSMGFLISNFKKAQGTMLYNY 239 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G ++ E + + I S + TD +++ + + +LR + I Sbjct: 240 SHGIDESEV-EISRQTKSIGNSTTLKNDTTDINEVKKVFLALSDSVGTRLRRKDLKGNTI 298 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + IK + F + S L T + I A + + W + G+ +G Sbjct: 299 TVTIKNNLF------HSYSHQRTLPYFTNSTNTIYEQAFKLFNEFWN-NDAIRLLGISVG 351 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 V QL+L ++ +++ VMD L G+ + Sbjct: 352 GLNKDEVNQLSLIEEKIENEKMKKIEEVMDKLRDNYGQDIIKRG 395 >UniRef50_Q04M21 DNA polymerase IV n=98 Tax=Bacilli RepID=DPO4_STRP2 Length = 353 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 147/355 (41%), Gaps = 21/355 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-----NNDGCVIARNAEAKALGVKMGDPWF 56 D++AF+A+ E P L GKPV++ S G V + EA+A GV Sbjct: 14 IIHIDMDAFFAAVEIKDNPKLRGKPVIIGSDPRQTGGRGVVSTCSYEARAFGVHSAMSSK 73 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRD 115 + + + V S NYE Y + ++ + + + +E SIDEA+ D+T + + Sbjct: 74 EAYERCPQA--VFISGNYEKYKAVGLQIRAIFKRYTDLIEPMSIDEAYLDVTENKLGIKS 131 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 R I+ + Q HLT GI+ K LAK+A+ K + + E+ Sbjct: 132 AVKIARLIQKDIWQELHLTASAGISYNKFLAKMASDYQKPHG------LTVILPEQAEDF 185 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + + + G+G++ ++L MG+ T DL + + F + R+ RG Sbjct: 186 LKQMDISKFHGVGKKTVERLHQMGVFTGADLLEVPEVTLIDRFGRLGYDLYRKARGIHNS 245 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ ++ I +++G+ + +++ + + + A L + + + + I+ Sbjct: 246 PVKS-NRIRKSIGKEKTYGKILRAEEDIKKELTLLSEKVALNLHQQEKAGKIVILKIRYE 304 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 F+ + + TQD+ I A + + + + + G+ + F Sbjct: 305 DFS------TLTKRKSIAQKTQDASQISQIALQLYEELSEKERGVRLLGITMTGF 353 >UniRef50_Q2IM85 DNA-directed DNA polymerase n=7 Tax=Myxococcales RepID=Q2IM85_ANADE Length = 418 Score = 284 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 98/410 (23%), Positives = 159/410 (38%), Gaps = 25/410 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E + P+L G+PV+V N G V A + EA+ GV+ P + + Sbjct: 13 ILHLDLDAFYASVEQLDHPELRGRPVIVGGTGNRGVVCAASYEARRFGVRSALPTARARR 72 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDF 119 L V + Y+++S RV +P VE S+DEAF D+T R D Sbjct: 73 LCPDG--VFLPPRFGRYSELSRRVFDVYRRYTPLVEPLSLDEAFLDVTASRALHGGGPDI 130 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R I+A V L V G+A K AK+A K + + ++ L Sbjct: 131 ARAIKAAVRGECGLAVSAGVADVKMAAKIATDLGKPDG------LVVVPPGGVAAFLAPL 184 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLE 238 PV +WG+G L +G+ T+ DLA + R GE ++ Sbjct: 185 PVGRLWGVGEVTEAALRRIGVATIGDLARMPESALAAALGPTHARGLRALACGEDPREVV 244 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + +F + + P++ + + + A A +LR+ ++ +K + F Sbjct: 245 P-DEEAKSVGAEDTFDQDLLGRPALERELLAQAGTVARRLRAAGLAGHVVTLKVKYADFT 303 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-Q 357 L + V L T D R I +AA L + + G+ + F Q Sbjct: 304 L------VTRRVTLERATDDDRAIFDAACAQLARVDLR-RPVRLTGISVSGFAGDEERGQ 356 Query: 358 LNLFDDNAPR-----PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 L LF + L +D L + G G + A + + Sbjct: 357 LGLFGGAPAPPPPEASRRKALNAALDALAGRFGEGAVTRADLAGRPPRRR 406 >UniRef50_A1WY69 DNA polymerase IV n=47 Tax=Bacteria RepID=DPO4_HALHL Length = 356 Score = 284 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 81/367 (22%), Positives = 144/367 (39%), Gaps = 19/367 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P L G+PVVV + G V A + EA+A G++ P + Sbjct: 6 IIHIDMDAFYASVEQRDDPSLRGQPVVVGGSPEGRGVVAAASYEARAFGIRSAQPAAWAR 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 + ++ Y +S ++ + + +E S+DEA+ D+TG + R T Sbjct: 66 RRCPEA--IFLRPRFDRYRAISRQIHGIFADFATTIEPLSLDEAYLDVTGSQRFRGSATH 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + IR + + T LT G++ K LAKLA+ K + E ++A Sbjct: 124 MAQAIRRRIREETGLTASAGVSYNKLLAKLASDEGKPDGLY------VVPPEDGPAYVAA 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ + G+G + +L+ +GI+ V DL D ++ + RG + Sbjct: 178 QPIRRLHGVGPATAARLERLGIRQVGDLLDWELADLHVFLGNRAGTLHDAARGIDHRPVR 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 +++ I R+FG+ D + Q + + A +L R ++ ++ + F Sbjct: 238 PR-RSRKSIGAERTFGDDTRDLGEIHQRLAPLITKVATRLEHHELVARTVTLKLRYADFE 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + V P + DI L + GV L + + Sbjct: 297 ------SITRRVSPPGPVAQAADIEALIPALLAETEAGSRPVRLLGVSLSGLQPKQ-REQ 349 Query: 359 NLFDDNA 365 +LF Sbjct: 350 DLFSALT 356 >UniRef50_Q1QAG3 DNA-directed DNA polymerase n=2 Tax=Psychrobacter RepID=Q1QAG3_PSYCK Length = 371 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 86/362 (23%), Positives = 142/362 (39%), Gaps = 19/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P+L GKP+VV N G V A + E + GV+ ++ + Sbjct: 22 IIHIDMDAFYASVEQRDFPELRGKPLVVGGDPNGRGVVAAASYEVRKFGVRSAMSCYEAR 81 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTD 118 V+ +++Y +S + + L+P VE S+DEA+ D+TG+ + T Sbjct: 82 KRCPE--VIFVPPRFDVYRAVSVEIRRIMHILTPHVEPLSLDEAYLDVTGLSVHQGSATL 139 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +RA +L +T L G++ K LAK+A+ K + +SA Sbjct: 140 MANWLRAQILGQTGLNASAGVSFNKMLAKIASDINKPNGTA------VITPADADAFISA 193 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++ GIG+ +K+L AMG+ DL T + F + G ++ Sbjct: 194 LPIERFHGIGKATAKRLHAMGVSNGADLRRTPAAILVNEFGKRGQFYHDIAHGRDERAVK 253 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 T + + +F E +TD ++ I A A +L + I+ +K S F Sbjct: 254 SE-RTHKSVGSETTFRENLTDDNELKIQIYEQNADAFSQLHKKQLIAYTITLKVKYSDFT 312 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S L T + + I + GV S Sbjct: 313 ------QVTRSHTLSTAFDSAESAHFWLDKLFLDI-PRTLPIRLVGVTFSSLTSATQVTP 365 Query: 359 NL 360 L Sbjct: 366 QL 367 >UniRef50_C8WAH8 DNA-directed DNA polymerase n=3 Tax=Coriobacteriaceae RepID=C8WAH8_ATOPD Length = 444 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 96/418 (22%), Positives = 171/418 (40%), Gaps = 38/418 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 L D++AF+AS E + P+ GKPV+V + G V + EA+ GV Sbjct: 25 IGLLDLDAFFASVEQLDHPEWRGKPVIVGGSPHKRGVVSTASYEARKYGVHSAMASATAV 84 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L + + Y Y++MS+ VM L++ +P VE SIDEAF D+T G + + + Sbjct: 85 KLCPQA--IWTPGRYNRYSEMSSLVMGFLKDETPLVEQVSIDEAFFDITPGRFSKENPLE 142 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I+ V +T +G+ KT+AK+A+ K + + ++ Sbjct: 143 ICKRIQKKV-AALGITCSIGLGTNKTIAKIASEQEKPRG------LTAVFPGTESHFLAP 195 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++ + GIG ++K L GI+T+ +L+ D ++ + + +G+ ++ Sbjct: 196 LPIEAMSGIGPAMAKTLHQQGIRTLGELSRADSTYLTSFVGNTASKMILRAQGKEVSEVH 255 Query: 239 EFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 E A + + + R+F + D + +AI + +LR + ++ +K S Sbjct: 256 EAAHPRDVKSVSNERTFETDLFDKQEIEEAIRHISGVVGRRLRKKQLQGFTVTLKVKASA 315 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-- 354 + + ++ PT D A L IW+ G + GV + F + Sbjct: 316 TESH------TVQKRMSIPTDDEHLFAEIAVNLLPTIWKEGQPVRLLGVGISSFTDEDNS 369 Query: 355 -VAQLNLFDDNA---------------PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 Q +LFD + PR L V D L K G + + Sbjct: 370 KPVQTSLFDQSEDTFNTGASVPTTKKKPRSDLRHLSEVTDKLKDKFGASVVQYGRDLR 427 >UniRef50_Q2P7M9 DNA polymerase IV n=22 Tax=Proteobacteria RepID=DPO4_XANOM Length = 359 Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 144/372 (38%), Gaps = 21/372 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P L GKPVVV V A + EA+ G++ P + + Sbjct: 4 IVHVDMDAFYASVEQRDDPGLRGKPVVVAWRGARSVVCAASYEARTFGIRSAMPAVRAER 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDF 119 L + ++ Y +S +V + VE S+DEA+ D+T + + T+ Sbjct: 64 LCP--NAIFVPPDFVRYKAVSRQVREIFHRHTDLVEPLSLDEAYLDVTQAKTGMQLATEI 121 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + IR + + T LT GIA K LAK+A+ K + + R + L Sbjct: 122 AQLIRTQIREETELTASAGIAPNKFLAKIASDWRKPDGQF------VIAPSRIDAFLLPL 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V+ + G+G+ + KL A+GI TV DL + ++ HF + R RG +E Sbjct: 176 KVNRIPGVGKVMDGKLAALGIVTVADLRLRPLEELQAHFGSFGQSLYRRARGIDERPVEP 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 Q + +F E + ++ I A + R + R + +KTS F + Sbjct: 236 DQDV-QSVSSEDTFSEDLA-LDALDTHILRLAEKTWLATRRTERIGRTVVLKLKTSNFRI 293 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA---GHRYQKAGVMLGDFFSQGVA 356 + S P + A + +R G+ +G Sbjct: 294 ------LTRSCTPEQPPVSQEALAQIALALTRRVELPAQTRYRLVGVGLSGFSNVEEGAV 347 Query: 357 QLNLFDDNAPRP 368 Q LF + Sbjct: 348 QGQLFGEIPQAE 359 >UniRef50_Q2LU75 DNA polymerase IV n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LU75_SYNAS Length = 362 Score = 283 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 74/356 (20%), Positives = 135/356 (37%), Gaps = 22/356 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS----NNDGCVIARNAEAKALGVKMGDPWFK 57 D++AF+AS E +P+L GKPVV+ + G V N EA+ G+ P Sbjct: 16 ILHIDMDAFFASVEENRKPELKGKPVVIGGMGDPSKRGVVSTANYEARKYGISSAMPLRT 75 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 L R + +Y+ Y +S + L ++ +E IDEA+ D++ N Sbjct: 76 AYKLCPRA--IFLPVDYKAYLAVSRYFKAVLLNITTIMEDVGIDEAYLDISE--NRDTDE 131 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +I+ + ++T LT +GIA K LAK+A+ K + + + E + Sbjct: 132 KISEKIKTGIYEKTGLTCSIGIAPNKLLAKIASDMNKPDG------LTIFSGEDIENRLW 185 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQ 236 LP+ ++GIG + + L A+ I T+ LA + F RG Sbjct: 186 PLPIRKLYGIGPKTEEHLKALNIATIGQLAALPPEVLVARFGPSYGHYLHEASRGIDESP 245 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + +F ++ ++ + + L + R + I+ S Sbjct: 246 IITSWEP-KSFSREITFQVDEKNWQAIARTLAELTKEVVSDLAEKGYAARNVILKIRYSD 304 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 F + + + +I A L + +G + + GV +G Sbjct: 305 FR------TVTRACSIDQAVGKEEEIRRMAFSCLKRVDLSGKKIRLVGVRVGRLEK 354 >UniRef50_B1KD33 DNA polymerase IV n=55 Tax=Proteobacteria RepID=DPO4_SHEWM Length = 364 Score = 283 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 65/365 (17%), Positives = 130/365 (35%), Gaps = 26/365 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ ++A+ E P+L GKP+ V G + N EA+A GV+ Sbjct: 8 IIHIDMDCYFAAVEMRDFPELRGKPIAVGGRSDRRGVISTCNYEARAFGVRSAMASGYAL 67 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L ++ +Y ++S ++ + +E S+DEA+ D+T + C T Sbjct: 68 KLCPD--LILVPGRMSVYKEVSAQIRDIFARYTDLIEPLSLDEAYLDVTECKQCQGSATL 125 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + IR + + T LT GIA K LAK+A+ K + + + ++ Sbjct: 126 IAQAIRQEIFEVTGLTASAGIAPVKFLAKVASDLNKPNGQY------VITPDMISSFITT 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + G+G+ KKL+ +G+ T +L + + F + + +G + Sbjct: 180 LPLTKIPGVGKVTGKKLEDIGLTTCGELQAYPKSELIERFGKFGKILIERAQGIDERAIS 239 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS--EHQYCRFISTFIKTSP 296 ++ + + + I + ++ + + +K + Sbjct: 240 P-HRERKSVGVETTLAKDIYTLEQCHGVMPQLIQELGARMSRSAKGRSINKQVVKLKFND 298 Query: 297 FALNEPYYGNSASVKLLTPTQ--DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 F + + + +SL+ G R V L Sbjct: 299 F----------KQTTIEHRSDEMSVKLFYELLAQSLERQQGRGIRLLGVSVGLACQADSN 348 Query: 355 VAQLN 359 A+ N Sbjct: 349 TAKDN 353 >UniRef50_B0VP90 DNA polymerase IV, devoid of proofreading, damage-inducible protein P n=12 Tax=Acinetobacter RepID=B0VP90_ACIBS Length = 363 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 142/347 (40%), Gaps = 19/347 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E RPDL PVV+ + + A + A+ G++ + + Sbjct: 4 IIHIDMDAFYASVELRERPDLRHLPVVISSHHPRAVIAAASYPAREFGLRSAMSMSQARK 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDF 119 L + VV N+E Y +S ++ S ++ + +E S+DEA+ D+T ++ T+ Sbjct: 64 LCPQ--VVIIEPNFEKYRAISAQIHSIFQQYTTLIEPLSLDEAYLDVTENLKQIASATEV 121 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IR + ++T LT G+A K LAK+A+ K + + + + L Sbjct: 122 AMHIREDIFRQTGLTASAGVAPNKFLAKVASDWNKPNG------LFVIKPSQVASFIQDL 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G+ +KL + + T+ DL + + HF ++ +G ++ Sbjct: 176 PLKKIPGVGKVTQEKLQQLELHTLGDLQKIEEAVLVHHFGKYGQQLYLYAQGIDNRPVQA 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q+I +F T + A + + L + R ++ +K F Sbjct: 236 E-RARQQISKETTFDSDFT-LAQCQSYWHGLAEKVWQSLEKKQLNARGVNIKLKLKNFQ- 292 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA-GHRYQKAGV 345 S P +D+I L+ + +++ GV Sbjct: 293 -----TLQHSKSFKNPIHSQQDLIQVLFLLLNEMHIPENFQFRLIGV 334 >UniRef50_A9KLV9 DNA-directed DNA polymerase n=8 Tax=Clostridiales RepID=A9KLV9_CLOPH Length = 432 Score = 282 bits (722), Expect = 1e-74, Method: Composition-based stats. Identities = 98/413 (23%), Positives = 160/413 (38%), Gaps = 26/413 (6%) Query: 1 MFALCDVNAFYASCETVFRP-------DLWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 +F DVN+ + S E +R DL P V+ N G V+A++ AK L + Sbjct: 18 IFFHIDVNSAFLSWEAAYRLHVLGESVDLREIPSVIGGDKENRHGIVLAKSTSAKKLKIH 77 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+ +V NY+ Y S +M L SP+VE YSIDEAF D++G Sbjct: 78 TGEALGAAVQKCP--NLVIIPPNYQRYVKASKSLMEILHRFSPKVEQYSIDEAFVDMSGS 135 Query: 111 RNCRDLTDF-GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 ++ + + TV +G++ K LAK+A K T Sbjct: 136 ELLYGGPVIVANNLKDLIEEELKFTVNIGVSSNKLLAKMAGELKKPNLVHTMF------P 189 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 E K M LPV +++ +GR KKL +GIKT+ +LA TD++ ++ HF E + Sbjct: 190 EEIPKKMWPLPVGELFFVGRATEKKLFNLGIKTIGELAQTDVKILKAHFGKYGEVLYQFS 249 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G L + S + I + S + +LR + + +S Sbjct: 250 HGIDESPLFVPLEANKGYGNSVTTPYDIVTMEHANLVLLSLSETVCTRLRMDGVKGQCVS 309 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 + T F S L + + + ++ A R +W ++ GV Sbjct: 310 VSVTTDTFQ------RASHQGMLFSASNTTMEVYRFACRLFKNLWDGRTPIRQMGVHTSR 363 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 + Q NLFD +L +D++ + G ++ A + M Sbjct: 364 ITKESTMQYNLFD-WDRYEKLSKLDETIDSIRKRYGDDSVMRACFLNTSTYHM 415 >UniRef50_D1PGW5 DNA-directed DNA polymerase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGW5_9BACT Length = 387 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 79/361 (21%), Positives = 152/361 (42%), Gaps = 18/361 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+A+ E P+L GKPV V G V + EA+ GV + K Sbjct: 21 IIHIDMDAFFAAVEQRDNPELRGKPVAVGFDGPRGVVSTASYEARKYGVHSAQSIAQAKQ 80 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDF 119 ++ ++ YA +S+++ +E + +E SIDEAF D+T + D Sbjct: 81 RCP--NLIIVPCRHDYYAKISHQIHQIFQEYTDLIEPISIDEAFLDVTQNKKGIELAVDI 138 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +EI+ + + T LT GI+ K LAK+A+ K G+ + ++ ++ L Sbjct: 139 AKEIKTRIKEATGLTASAGISYCKFLAKVASDYRKPD-----GICTIH-PDKAYDFIAQL 192 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P++D WG+G++ +K+ MGI DL + + F RG + Sbjct: 193 PIEDFWGVGKKTLQKMHFMGIFNGADLRKVSEEHLVEVFGKAGHIFYDFARGIDERPVIT 252 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + ++ + C ++F E I ++ + E++ R ++ +K + F Sbjct: 253 Y-RERKSVGCEQTFLEDIYLKTAVIIELYHTVLELLERIAKSGFEGRTLTLKVKFADFT- 310 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI-WQAGHRYQKAGVMLGDFFSQGVAQL 358 + S+ + DI+ A R L + + + H + G+ + + S+ + Sbjct: 311 -----QITRSISQEKVLKKKDDILPLAKRLLKQVDYSSAHPIRLLGLSVSNASSEEARKQ 365 Query: 359 N 359 + Sbjct: 366 D 366 >UniRef50_Q2FKS4 DNA-directed DNA polymerase n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKS4_METHJ Length = 368 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 88/367 (23%), Positives = 153/367 (41%), Gaps = 21/367 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D+++FYAS E PDL GKPVV+ G V + EA+A G+ P Sbjct: 17 IILHLDMDSFYASVEIRNNPDLSGKPVVIGADPMQGTGRGVVSTCSYEARAFGIHSAMPI 76 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + L + + YA +S +M L ++ +E SIDEA+ DL+ R+ Sbjct: 77 SQAYHLCPHA--IFIPPHMATYAQVSATIMQILRGIAGEIEQVSIDEAYLDLSCDRSYEL 134 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 I+ + + LT VG+A ++ AK+A+ K + + + + Sbjct: 135 AAHHAANIKQVIRNQVGLTCSVGLAPSRIYAKMASEQQKPDG------LTVVSPDTLESF 188 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + LPV + GIG++ ++ L G++T+ D+A DI+ ++ F R + RG+ Sbjct: 189 LKPLPVGKIPGIGKKSAQVLINAGLQTIGDIARCDIQTLQDMFGSHAVRLHQIARGQDRE 248 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 L E ++ I +F T + ++ + +L ++ Y R I I+ + Sbjct: 249 GLRESG-KRRSISREHTFLRDSTSPDEILGSLHTMILSLCHELEEQNIYSRTIGIRIRYT 307 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + SV L+ PT++ R I A +W + GV Sbjct: 308 GF------ITRTKSVTLMQPTREVRVIECAIDGLFTEMWDRS-PVRLIGVRFSGLIHPDP 360 Query: 356 AQLNLFD 362 Q +L D Sbjct: 361 VQRSLSD 367 >UniRef50_C7MN57 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=3 Tax=Coriobacteriaceae RepID=C7MN57_CRYCD Length = 454 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 97/425 (22%), Positives = 159/425 (37%), Gaps = 43/425 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 L D++AF+AS E + P GKPV+V N G V + EA+ GV P K Sbjct: 29 IMLLDLDAFFASVEQLDHPAWRGKPVIVGGNPEARGVVSTASYEARTYGVHSAMPSSTAK 88 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L + Y ++S +VMS +E+ SP +E SIDEAF D+T R Sbjct: 89 RLCP--NAFWTPGRFSRYREISRQVMSIMEDESPALEQVSIDEAFLDITPSRAQTEHPAA 146 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I+ V + +T +G+ ++K +AK A+ A K + + + ++ Sbjct: 147 IAQRIQQRVCE-LGITCSIGLGRSKAVAKTASEAHKPRG------LTIVPPGYEETFLAG 199 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP + GIG + L GI T+ +A D + F RG + Sbjct: 200 LPTKAMSGIGPAAQQALRKFGITTLGQVAQADDVILNHVFGKNASLMRDRCRGCDDSPVM 259 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + SF +T + A+ + AA+ ++R +S ++ F+ Sbjct: 260 -HPAGAKSVSNEMSFAVDLTSREDIEAALSTVAAKVGRRMRMNGLVGSTLSLKLRRGDFS 318 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-VAQ 357 ++ SA L P D I LD +W+ G + G L G Q Sbjct: 319 IH------SAQCHLDIPCDDEYVITPILFDLLDRVWRPGDSVRLVGCALTHIEEVGAPLQ 372 Query: 358 LNLFD-----------------DNAPRPGSEQ------LMTVMDTLNAKEGRGTLYFAGQ 394 LFD A R ++ L D++ + G L + + Sbjct: 373 ETLFDVADEAKPDDSSTTEPNTQAAQRARMKREDVRAGLKAATDSVRNRFGETALQYGSE 432 Query: 395 GIQQQ 399 + Sbjct: 433 LRTTR 437 >UniRef50_C7RFL5 DNA-directed DNA polymerase n=3 Tax=Anaerococcus RepID=C7RFL5_ANAPD Length = 413 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 81/404 (20%), Positives = 158/404 (39%), Gaps = 21/404 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+NA YAS E P L G P+ V N ++A++ EAK GVK G+ ++ Sbjct: 4 VILHSDMNACYASIEQKLNPKLKGIPMAVAGNPKNRNGIILAKSQEAKEAGVKTGEALWQ 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 + +Y+ Y S E + +VE + +DE F D+TG + Sbjct: 64 AFAKCPD--LTIVPPHYDEYLKHSKLARKIYYEYTNQVEPFGLDECFLDVTGSAHLFGTG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + +IR + + +TV VG++ K AKL + K V + + ++++ Sbjct: 122 EEIANKIRERMKEEVGITVSVGVSFCKIFAKLGSDMKKPDA------VTIIGEDNFKEIV 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV ++ G+GR +KL+ +GI T+ +LA+TD IR + G Sbjct: 176 WPLPVREMVGVGRATERKLNGIGIFTLGELANTDPDLIRNLLGINGVYLWEYANGLDIRP 235 Query: 237 LEEFAP--TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + I S + + + + + + + +++LR + F++ Sbjct: 236 VHDRDHKEPVKTIGNSSTCRKDLVNNREVFNVLQELSFSVSKRLRQAGLEAFGVEIFVRN 295 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ- 353 + + + +Q S + ++ + G+ + Sbjct: 296 NELQ------SYNFQKPIKLASQSSIVLAREGFDLFKEKYKWDFPVRAVGIRAIKLRKEG 349 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 G +Q+++F D E T + + K G+ + F G Sbjct: 350 GGSQMDVFSDYKKLIKDENCDTALYKIRQKYGKDAISFLGLMRD 393 >UniRef50_UPI000050FCD1 DNA-directed DNA polymerase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FCD1 Length = 419 Score = 282 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 87/402 (21%), Positives = 170/402 (42%), Gaps = 19/402 (4%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D+++F+ S E + RP+L G+PV+V + G V++ + EA+ GV P + +L Sbjct: 26 LHLDMDSFFVSVELLSRPELVGRPVIVGGRSGRGVVVSASYEAREFGVHAAMPMGRAMNL 85 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDFG 120 V+ ++ LY+ S +V + +++P + S+DEA+ D++ VR Sbjct: 86 CPFAEVI--PPSHGLYSSYSQKVFDLVAQVTPDFQQVSVDEAYIDVSAAVRRLGSPVRIT 143 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++RA + +T L+ VGIA ++ +AKLA+ AK + L L R+ + +P Sbjct: 144 SQLRAEIEAQTGLSASVGIAGSRVVAKLASTRAKPHGQ------LLVPLSATREFLDPMP 197 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++ + G+G + + GI+ + DLA D + + F R G ++ Sbjct: 198 IEALPGVGEKTKEGFFRYGIRLIGDLAAVDEAWAGRVFGAHGHHLWRSAHGLDSHGMDRQ 257 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I +F E + D + + A + A ++R++ + + + + F Sbjct: 258 V-KDRSISAEHTFNEDVWDLSQLEHELLRLADKVAHRVRADGKVATTLGLKYRLADFT-- 314 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG-HRYQKAGVMLGDFFSQGVAQLN 359 S S+ L PT +R+I A ++ + + + GV + Sbjct: 315 ----TLSRSITLDAPTDLAREIYEALRPAMRNLREQKSKGVRLLGVRAAGLMDFSASGRQ 370 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 + D A G E +D + K G + A ++ Sbjct: 371 VRLDEAEDSGREA-EVALDDVRKKFGTAAISQASLLRKRPEH 411 >UniRef50_C1F962 Putative DNA polymerase IV n=2 Tax=Bacteria RepID=C1F962_ACIC5 Length = 374 Score = 281 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 81/357 (22%), Positives = 138/357 (38%), Gaps = 19/357 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P+L GKPVVV V A + EA+ GV+ P + Sbjct: 16 IVHVDMDAFYASVEQRDAPELRGKPVVVAWRGRRSVVCAASYEARQFGVRSAMPAVTAER 75 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDF 119 L + + ++ Y +S V E + +E S+DEA+ D+T + T Sbjct: 76 LCPQA--IFVPPDFTRYKAVSRAVREIFERHTDLIEPLSLDEAYLDVTHNKTGLPTATKV 133 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IR + + LT G+A K LAK+A+ K + + + + L Sbjct: 134 AITIRRQIREELSLTASAGVAPNKFLAKIASDWRKPDG------LFVIQPQDLATFLPPL 187 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V + G+G+ ++L +GI+T DL D+ + +F R RG + Sbjct: 188 AVGRIPGVGKVTEERLARLGIRTAGDLQHYDLATLESNFGRYGLRLYHLARGVDHSPVTP 247 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + +F I + I + + R E + R + +KT F + Sbjct: 248 -NRPTKSVSAEDTFEADIP-LSATEPVIRRLSEKVWNASRREARIARTVVLKLKTGDFHI 305 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQGV 355 + + S+ TP ++ A + + A Y+ GV L +F Sbjct: 306 H------TRSLTPETPPASCEELTAIALSLRERVDLGADRLYRLIGVGLSNFRDPEP 356 >UniRef50_C0D1Q6 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0D1Q6_9CLOT Length = 435 Score = 281 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 97/411 (23%), Positives = 166/411 (40%), Gaps = 28/411 (6%) Query: 1 MFALCDVNAFYASCETVFRP-------DLWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 + DVN+ + S E+V+R DL P V + G V+A++ AK GV Sbjct: 22 LIFHIDVNSAFLSWESVYRLSADPQALDLRTIPSAVGGDAKSRHGIVLAKSTLAKQYGVT 81 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + + + S ++ Y S+R+M LE +P E +SIDE F D+T Sbjct: 82 TGEPLAQALRKCPQ--LTVVPSRFDYYIKCSHRMMELLETYTPDHEKFSIDEIFLDMTQT 139 Query: 111 RNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + + IR + TV +G+A K LAK+A+ K + Sbjct: 140 IHLFGQPLEAANRIRERIRDELGFTVNIGVAPNKLLAKMASDFEKPDK------CHTLFA 193 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR-E 228 + LP+ +++ +G +K++ +GI T+ LA D+ ++ H T+R Sbjct: 194 HEIPSKLWPLPIRELFFVGGAAQRKMENLGIHTIGQLASCDLAVLKAHLGEKYAVTIRGY 253 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G + E P + S + ++DY + Q I S +LR++ CR + Sbjct: 254 ANGVDVDPVAEKDPINKCYGNSVTLSRDVSDYETACQVILSLCETVGARLRADRVLCRNV 313 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 +K F + S + L PT + + A R L W + GV G Sbjct: 314 CVELKDWEF------HTQSHQMILPEPTDSTSALYGYACRLLREFWDR-TPVRLIGVRAG 366 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +QL+LFD + + L +D + +K G ++ A + Sbjct: 367 KIDDDSFSQLSLFDSPS-NRKKKDLEKAVDQIRSKFGVDSIKRASFLKEDS 416 >UniRef50_B9HS71 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HS71_POPTR Length = 1191 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 70/372 (18%), Positives = 133/372 (35%), Gaps = 23/372 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN----NDGCVIARNAEAKALGVKMGDPWFK 57 D++ F+ S P+L KPV V + + + N A+ GVK G Sbjct: 441 IIHVDMDCFFVSVVIRNHPELHDKPVAVCHSDNPKGTAEISSANYPARNYGVKAGIFVRD 500 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K L + +V F N++ Y ++++++ + L + +V+ S DEAF D+T ++ D Sbjct: 501 AKALCPQ--LVIFPYNFKAYEEVADQLYNILHKHCHKVQAISCDEAFLDITE-KDMGDPE 557 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 IR + T T GIA +A+LA +AK + + + Sbjct: 558 LLASTIRKEIFDTTGCTASAGIAGNMLMARLATRSAKPNGQCY------IPSVSVDEYLH 611 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 LP+ + GIG + +KL + T L ++K F E RG Sbjct: 612 KLPIKALPGIGHVLEEKLKKQNVWTCGQLRLISKESLQKDFGLKTGEMLWNYSRGVDNRL 671 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK--- 293 + + I ++G R D + + + + +L+ R + IK Sbjct: 672 VG-NIQESKTIGAEVNWGVRFKDLQDSQCFLLNLCKEVSFRLQGCRVQGRTFTLKIKKRR 730 Query: 294 -----TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + + S S+ + D + + + + G+ + Sbjct: 731 KDAGEPAKYMGCGDCENLSHSMTVPIAIDDVEALQRITKQLFGSFCLDVKDIRGVGLQVS 790 Query: 349 DFFSQGVAQLNL 360 + ++ L Sbjct: 791 KLENADPSKQVL 802 >UniRef50_Q2S2C0 Putative DNA polymerase IV n=2 Tax=Bacteria RepID=Q2S2C0_SALRD Length = 373 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 81/362 (22%), Positives = 147/362 (40%), Gaps = 18/362 (4%) Query: 2 FALCDVNAFYASCETVFRPD-LWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYA E PD GKP+ V + G V + EA+ GV P + Sbjct: 21 IVHVDMDAFYAQIEQRDFPDRYAGKPIAVGGDPPRGVVQTASYEARPYGVHSAQPAVEAD 80 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 ++ S ++Y + S R+ L + VE S+DEA+ D+T + R T Sbjct: 81 RKCPD--LIFVSPRMDVYQEESKRIRKILRRYTDLVEPLSLDEAYLDVTEPKTGRPSGTL 138 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R +RA + + T LT G+ K +AK+A+ K + + + Q + ++ Sbjct: 139 IARRLRAEIYEETGLTASAGVGPGKFVAKVASDLDKPDG------LTVVRPDEQMEFIAQ 192 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++ GIG + K+ +GI+T DL +T R + HF G ++ Sbjct: 193 LPIEKFHGIGPVTAAKMQELGIQTGADLQETPERTLIHHFGKRGRHFKTLAVGTDDRPVQ 252 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F E I +M + A R A++LR ++ R ++ +K+ Sbjct: 253 P-DRDRKSVGAERTFPEDIARAETMLDRLSPIAERVAQRLRQANRKGRTVTLKLKSHDHQ 311 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 ++ + + P + ++ R L + G+ + + A Sbjct: 312 VS------TRQTTVDRPLRAEDALMTITERLLRRPHPPDEPVRLLGISVSSLTDEERAGG 365 Query: 359 NL 360 L Sbjct: 366 QL 367 >UniRef50_B9JVH1 DNA-damage inducible protein n=18 Tax=Alphaproteobacteria RepID=B9JVH1_AGRVS Length = 428 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 87/392 (22%), Positives = 159/392 (40%), Gaps = 19/392 (4%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 A D +AFYAS E PDL KP+++ G V A+ GV+ P FK + Sbjct: 46 AHIDCDAFYASVEKRDNPDLIDKPLIIGGGKRGVVSTACYVARIHGVRSAMPMFKALEAC 105 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFG 120 V N E Y+ + +V + +EEL+P V+ SIDEAF +L G Sbjct: 106 PDA--VVIPPNMEKYSRVGRQVRAMMEELTPLVQPLSIDEAFLELKGTEALHHAPPALVL 163 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + +TV VG++ K LAK+A+ K + ++ P Sbjct: 164 ARLARRIESEIGITVSVGLSYCKFLAKVASDLQKPRG------FSVVGEAEALDFLAPRP 217 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +WG+G+ + L+ GI+T+ L + + + + + +R R +G + Sbjct: 218 VTTIWGVGKAFASTLEKDGIRTIGQLQTMEESDLIRRYGSMGQRLARLSKGIDDRDVHT- 276 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + +F + I+ + + + + A +L+ + + +K++ F L Sbjct: 277 NDPAKSVSAETTFFDDISRREDLVPHLRKLSEKVAWRLKKQELAGHTVILKLKSADFKLR 336 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + + +L PTQ + I + L+ G +++ G+ + DF +A Sbjct: 337 ------TRNRRLDDPTQLADRIFRTGLQMLEKEAD-GTKFRLIGIGISDFADPSLADPPD 389 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 D ++ MD L K G+G + Sbjct: 390 LVDPDAARRAKA-EAAMDQLRMKFGKGMVETG 420 >UniRef50_C8WGA6 DNA-directed DNA polymerase n=3 Tax=Bacteria RepID=C8WGA6_EGGLE Length = 448 Score = 280 bits (715), Expect = 9e-74, Method: Composition-based stats. Identities = 87/413 (21%), Positives = 150/413 (36%), Gaps = 27/413 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D+NAFYAS E RP+L G P+VV + G V+A++A+AKA GVK G+ ++ Sbjct: 29 VIFHSDMNAFYASVEQAERPELRGVPLVVGGHEELRHGIVLAKSAQAKAAGVKTGEALWE 88 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RD 115 + G+V YE+Y S + + VE + +DEA+ DLTG D Sbjct: 89 ARAKCP--GLVVVPPRYEVYQAYSAMARRIYYQYTDLVEPFGLDEAWLDLTGSLPLLGGD 146 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 EI + TV VG++ K AK + K + + R Sbjct: 147 PARTAAEISGRIKAELGCTVSVGVSWNKIFAKFGSDFRKPDA------ITFITPQNYRCR 200 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + PV ++ +G KL + GI + +LA +R+ + RGE Sbjct: 201 VWEAPVSELLYVGAATRAKLHSSGIDRIGELACASPELLRRRLGKIGLVLRAFARGEDAT 260 Query: 236 QLEEFAPTK-------QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 ++ + + + + I + + + A++LR + Sbjct: 261 PVKPYDQARNEVDRTVKSFGNGLTAPHDIVSASDAKALVYLLSESVAQRLREARFRASTV 320 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG--HRYQKAGVM 346 S ++++ S L T + + A L A H + V Sbjct: 321 SIGVRSARDLA-----SYSRQTTLRRATNVTGVVARTAWGLLAANEPLDGEHPLRGLHVR 375 Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + Q +A R E L +D L + G + + + + Sbjct: 376 ASNLEPCDAPQQLELAFDARRRMLEDLDETIDDLRRRFGNTCIQRGAELLDES 428 >UniRef50_A9KNH1 DNA-directed DNA polymerase n=4 Tax=Clostridiales RepID=A9KNH1_CLOPH Length = 400 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 98/410 (23%), Positives = 173/410 (42%), Gaps = 28/410 (6%) Query: 1 MFALCDVNAFYASCETVFR----PD---LWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 + DVN+ + S E+V R P+ L P V + G V+A++ +AK+ G+ Sbjct: 7 LIFHVDVNSAFLSWESVHRLAADPESIDLRTIPSAVGGDKQSRHGIVLAKSTQAKSFGIV 66 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P +V N+E+Y S R+M+ L E +P + +SIDEAF D+T Sbjct: 67 TGEPLTHALQKCPS--LVVVPPNFEVYTRYSERLMNLLSEYTPTLNQFSIDEAFLDMTDT 124 Query: 111 RNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + D +IR VL+ TV +GI+ K LAK+A+ K + Sbjct: 125 YHLFGAPMDIANQIRDRVLKELGFTVNIGISTNKLLAKMASDFKKPN------LCHSLFP 178 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT-VRE 228 + M LPV++++ +G+ K +GI+++ DLA T++ ++ H Sbjct: 179 SEIPEKMWPLPVEELFFVGKSAKAKFGILGIRSIYDLAHTNVNILKTHLGNKYSALIHEY 238 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G +E P + S + + + D +Q + + + +LRS + C I Sbjct: 239 ANGIDEEPVEVTDPKAKGCGNSITLSQDVIDNAIAKQVLLALSETVGARLRSSNVSCSCI 298 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + IK + F + L T + I AA R D W + G+ Sbjct: 299 TVEIKYTNFQ------TYTHQTVLPHQTNTTATIYEAACRLFDEFWD-NSPIRLLGIRTT 351 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 +Q++LFD+N ++L + +D++ K G ++ A + Sbjct: 352 KLDDTDFSQISLFDNNQSD-KFKKLDSAIDSIRNKYGIDSVKRASFLKKG 400 >UniRef50_Q8UFV3 DNA polymerase IV 1 n=118 Tax=Alphaproteobacteria RepID=DPO41_AGRT5 Length = 405 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 91/401 (22%), Positives = 165/401 (41%), Gaps = 21/401 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AFYAS E P+L KPV+V G V A+ GV+ P FK + Sbjct: 23 IAHIDCDAFYASVEKRDNPELADKPVIVGGGKRGVVSTACYIARIHGVRSAMPMFKALEA 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 V + E Y+ + + + ++EL+P V+ SIDEAF DL+G Sbjct: 83 CPDA--VVIKPDMEKYSRVGREIRTMMQELTPLVQPLSIDEAFLDLSGTEKLHHDPPARV 140 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + V + ++V G++ K LAK+A+ K + ++A Sbjct: 141 LAKFTGRVEKEVGVSVSAGLSYCKFLAKVASDLQKPRG------FSVVGEAEALSFLAAR 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G+ + L+A GI+ + L + + + + + V+ +R R RG + Sbjct: 195 PVTTIWGVGKAFAATLEADGIRMIAQLQEMEESELMRRYGVMGQRLFRLARGIDERHVH- 253 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + +F I+ + + + S + + A +L+ + + +KT+ F Sbjct: 254 NNDPVKSVSSETTFFHDISRHEDLVPILRSLSEKVAWRLKKSGIAGQTVVLKMKTADF-- 311 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-VAQL 358 + + +L PTQ + I L+ G +++ G+ + D G Sbjct: 312 ----KSRTRNRRLDDPTQLADRIFRTGLALLEKETD-GTKFRLIGIGVSDLRDAGLADPP 366 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +L D A R + MD L K G+G++ ++ Sbjct: 367 DLVDRQATRRAAA--EAAMDKLRDKFGKGSVETGYTFRTRK 405 >UniRef50_Q38YP4 DNA-damage-inducible protein P n=30 Tax=Bacilli RepID=Q38YP4_LACSS Length = 376 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 78/365 (21%), Positives = 153/365 (41%), Gaps = 19/365 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYAS E +PDL KP+++ + G V N A+ GV Sbjct: 17 IIHIDMDAFYASIEEREQPDLRQKPLIIARDPSDTGGKGVVTTANYVARQYGVHSAMSAQ 76 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRD 115 K +L + V + N+ LY +S ++ ++ ++E + DEA+ D+T + Sbjct: 77 KAAELIPKHQAVFKTPNFPLYQSVSAQIHDIFHTVTDKIEPIAFDEAYLDVTENKLGLTH 136 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + ++ +L+ T L GI+ K LAK+A+ K R L E+ Sbjct: 137 TIEVVAYLQKAILEETQLVSSAGISYNKFLAKMASDYRKPAGR------TLVLPEQAIAF 190 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 +S LP++ G+G++ K+ +GI T DL F+ +HF + R +RG Sbjct: 191 LSRLPIEKFRGVGQKTVPKMQDLGIMTGADLLAQSEMFLMQHFGKLGYGLYRHVRGIDNR 250 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + E+ ++ I ++G+ + ++ + S A A++LR ++ + ++ Sbjct: 251 PV-EYQRERKSIGNEHTYGQPLISEEQVQVQLKSLAVELAQRLRKNQKHGLTVVLKVRNR 309 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + + L ++ ++ A + +I QA + G+ + + Q Sbjct: 310 QYE------TITKRKTLGEYVGNAAELEAIANQIWQSIGQAEVGIRLLGITVTNLAPQTF 363 Query: 356 AQLNL 360 + L Sbjct: 364 ENITL 368 >UniRef50_A8RF31 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RF31_9FIRM Length = 413 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 83/416 (19%), Positives = 156/416 (37%), Gaps = 24/416 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+N YA E + P L + V + ++A+N +AK GVK G+ + Sbjct: 4 VILHSDINHCYAQIEEMKFPQLREVCMAVGGSERSRHGIILAKNDKAKECGVKTGESLRE 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 + + NYE Y S +V + S +VE + +DEA+ D++ Sbjct: 64 AFVKCPQ--LCIIPPNYEEYVYYSEKVKEIYQAYSDKVESFGLDEAWIDVSESTKLFGSG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + EI+ V L+V +GI+ K AK+ + K + R ++ Sbjct: 122 YEIATEIQKRVKDELGLSVSIGISYNKVFAKMGSDMKKNMG------LVEITRTNFRDML 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP++ ++ +G+ +KKL I T+ +LA ++++HF + E G+ + Sbjct: 176 WPLPIEHLFYVGKATAKKLRQYSIVTIGELAQLPRVWLKEHFGKMGELVWWFANGQDISE 235 Query: 237 L--EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + I + + + + A A +LR + IS ++ Sbjct: 236 VAFHNQKEEVKSIGNGITTPRDLCTFEEAKIVFYVLAESVASRLREQGLQGNVISISLR- 294 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ- 353 N+ + K+ T + +I+ L + + V + Sbjct: 295 -----NKYLESITRQCKIDKATNLASEIMEHILLLLKENYDFHIPLRSVAVSISGIQYME 349 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ---QWQMKRAM 406 QLNLF D ++L V+D + K G + I Q +Q +R Sbjct: 350 CYRQLNLFVDEKNYQKQQRLEQVVDDIRKKYGFKKIQRCCMLIDQGLSDFQPQRDH 405 >UniRef50_C6W6Q9 DNA-directed DNA polymerase n=3 Tax=Bacteroidetes RepID=C6W6Q9_DYAFD Length = 416 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 89/400 (22%), Positives = 158/400 (39%), Gaps = 26/400 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++ F+ S E L KP++V + G V A + E + GV G P + Sbjct: 12 ILHFDLDTFFVSVERKQDSRLQNKPILVGGTGDRGVVAACSYETRQFGVHSGMPMKMARM 71 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L V+ N E Y+ S V + + P E SIDE + DL+G+ + Sbjct: 72 LCPEATVI--RGNGETYSKHSKEVSEIISQHVPVFEKASIDEFYADLSGMDKYFNCYGMA 129 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++R +++ T L + G+A K ++K+A AK + ++ ++ + Sbjct: 130 SDLRQRIIRETGLPISFGLATNKLVSKVATGEAKPNNQLR------VEPGAEKTFLAPME 183 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V + +G ++++ L+ +GI+ V + + + + K F G + F Sbjct: 184 VQKIPMVGDKMNQTLNNLGIRYVKTIQEMPMEMMGKVFGKNGVALWNRANGLDNSPIVPF 243 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ I R+FG+ D MR+ + + A A +LR+ + +S I+ S F Sbjct: 244 H-ERKSISSERTFGKDTGDVRKMREMVRAMAETLAFQLRTGDKLTSCVSVKIRYSDFN-- 300 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 S +K+ T +I R D ++ + GV D + +NL Sbjct: 301 ----TFSKQLKIA-YTSADHVLIPHIERLFDQLYNRRMMVRLVGVSFSDLVTGNYQ-INL 354 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKE-----GRGTLYFAGQG 395 FDD R L MD + K G L +A Sbjct: 355 FDDTEERLN---LYQAMDYIKTKYAYNKDGDQILTWASTM 391 >UniRef50_C7H0B0 Putative DNA polymerase IV n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0B0_9FIRM Length = 406 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 83/404 (20%), Positives = 171/404 (42%), Gaps = 24/404 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + CD+N+++ S E + P+L PV V N G ++A+N AK G+K G+ + Sbjct: 6 VILHCDMNSYFVSVELLKHPELKDLPVAVAGNPKNRHGIILAKNEIAKKYGIKTGETIWA 65 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 K+ + + S +Y+ Y S R+E +S+DE++ D+TG Sbjct: 66 AKNKCKDLEL--LSPHYDEYIKYHKLFNDIFYRYSDRIEKFSVDESWIDVTGSIKLFGTG 123 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + +IR V + +T+ G++ K AK+ + K + + + ++++ Sbjct: 124 KEIADKIRGEVREELGITLSAGVSFNKVFAKMGSEYKKPDAT------TVISRDNYKEVL 177 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV + + +G+ +K L++ GI T+ DLA + + ++ V + + G+ + Sbjct: 178 WPLPVSEFFMVGKITAKLLNSYGIYTIKDLAAAEPQILKAELGVKIYELIDSANGKSSDE 237 Query: 237 LEEFAPTKQ--EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 ++ + + I ++F E + +++ + + A++LRS + + + IK Sbjct: 238 VKYYKDNEDPMSIGHGKTFKEDLVTSTQVKKEVWGLSEMVAKRLRSHNLFAAGVKVVIKD 297 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 S F S KL PT + I A + A W + + + D Sbjct: 298 SDF------KSYSRQKKLRLPTDVTGHIAEEAFSLIKASWDFSKKLRAMSITGIDLRPDC 351 Query: 355 ---VAQLNLFDDNAPR-PGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 +Q ++F ++ VMD + K G ++ + + Sbjct: 352 KDIGSQYSIFSQGEQEGIKEREVDKVMDEIKQKFGDQSIGYGVK 395 >UniRef50_D1BPW6 UMUC domain protein DNA-repair protein n=2 Tax=Veillonella RepID=D1BPW6_VEIPT Length = 500 Score = 278 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 90/464 (19%), Positives = 170/464 (36%), Gaps = 76/464 (16%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E + P+ G PV+V ++ G V + EA+ GV P + K L Sbjct: 1 MHVDMDAFFASIEQLDHPEYKGHPVIVGGLSSRGVVATCSYEARKFGVHSAMPILRAKKL 60 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFG 120 + + Y ++SN++ S ++E +P +E SIDEAF +++G+ G Sbjct: 61 CPDG--IYVYPRMDRYKEVSNQIFSIMKEFTPYIEPLSIDEAFLEVSGMSTMYSGPKALG 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + I+ V ++T L + G+A K LAKLA+ K + + R++++++ LP Sbjct: 119 QAIKDRVFEKTGLIISAGLAPNKFLAKLASDLDKPDG------LVVIPYGREKEVLAPLP 172 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTD-IRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + +WG+G R K L A G + + + +R G +E Sbjct: 173 IKRIWGVGPRTEKILKAGGFHLIGHIQSLPDESTLIPLVGNQAKRIWELANGIDDRPVET 232 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 Q I ++ E +T+ ++ +A R +++LR Y +S ++ F Sbjct: 233 -DRKIQSIGAEETYEEDLTEGRAIELEFRYFANRLSKRLRRRSLYGHTVSIKVRYDDFT- 290 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA---------GHRYQKAG------ 344 S +L TP+ A + + Q + G Sbjct: 291 -----TVSRQKRLDTPSDHEHVFFETALLLWNKLLQDKTSKNPKGTKKDVEALGATMKVK 345 Query: 345 ----------------------------------------VMLGDFFSQGVAQLNLFDDN 364 + + + Q +LF+ Sbjct: 346 STDFRYSSSKDNRSNHIGSKYSSSSEIAFMDPPGPIRLLGLTVSGLDEEVPMQDSLFESP 405 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAGQG--IQQQWQMKRAM 406 ++L +V+D+L +K G + ++R Sbjct: 406 Q-DKTEDKLSSVLDSLESKFGETAVMSGALWQRFHGDNGIRRKR 448 >UniRef50_D0LIK9 DNA-directed DNA polymerase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIK9_HALO1 Length = 409 Score = 278 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 99/400 (24%), Positives = 150/400 (37%), Gaps = 24/400 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E P L GKPV+V + G V A + EA+ GV P Sbjct: 8 VLHVDLDAFFASVEQRDDPSLRGKPVLVGGSAERGVVAAASYEARRYGVHSAMPMAVALR 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDF 119 + V + YA+ S + L+ SP VE S+DEAF DLTG D Sbjct: 68 RCPQA--VVVRHSMGRYAEASRAFFAILDHFSPLVEPLSLDEAFLDLTGSERLLGDARTV 125 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + I+ V L V VG+A TK LAK+A+ K + + +R + L Sbjct: 126 AQTIKDRVRAELSLVVSVGVASTKFLAKIASDIDKPDG------LCVVEPDRVESFLHPL 179 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 PV +WG+G KL MG++T+ D+A + + G +E Sbjct: 180 PVSRLWGVGAVTQDKLHQMGLRTIGDVARYPSSVLSARLGKSMGAHLSALASGYDPRPVE 239 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 I +F + + + A R A +LR R + IK + F Sbjct: 240 RPGKPV-SIGHEETFEVDLGRKSDIAAVLLGQADRVAARLRRADLRARVVQLKIKYADFR 298 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-----AGHRYQKAGVMLGDFFSQ 353 L + L T D I A L + + + GV L + Sbjct: 299 L------LTRRRSLADATVDGGVIGAVAVAMLGELEVAENRGKAYAVRLCGVSLSGLEDR 352 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 + + + EQL +D ++A+ G G + A Sbjct: 353 EGPRQLTLGEP-RQQQGEQLGDALDRIHARFGEGVVKRAV 391 >UniRef50_C4GAM5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAM5_9FIRM Length = 425 Score = 278 bits (710), Expect = 3e-73, Method: Composition-based stats. Identities = 94/424 (22%), Positives = 163/424 (38%), Gaps = 30/424 (7%) Query: 1 MFALCDVNAFYASCETVFR-------PDLWGKPVVVLSN---NDGCVIARNAEAKALGVK 50 + DVN+ + S R DL P + + G + A++ AK G+ Sbjct: 5 IIFHVDVNSAFLSWTASDRMAKGIDKVDLRDLPSAIGGDPKTRHGIITAKSIPAKRYGIV 64 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + ++ +Y LYA S +M L + +P V+ +SIDEAFCD+TG Sbjct: 65 TGEPVSQALRKCP--SLILVPGDYSLYARQSQALMDLLRKYAPAVDPFSIDEAFCDMTGT 122 Query: 111 RNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + F +++ + + TV VGI+ LAK+A+ K + T Sbjct: 123 ASLYGDPVLFAHKLKDEIRRDLGFTVNVGISSNHLLAKMASDFTKPDRVHTLW------P 176 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 + M LP D+ +G ++KL ++GI T+ DLA T + HF + + Sbjct: 177 REIPRKMWPLPAADLLFVGESTAQKLKSLGILTIGDLAGTPEDLLVSHFGKHGSQMLAYA 236 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G L + + + D R + S A ++R + R + Sbjct: 237 NGTEPSDLTSRHRKSRGFSNEITISHDLVDREEARLILLSLCETLAARIRLQGDKIRLVG 296 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 + K S F S +L + ++ I A L +W G + GV + Sbjct: 297 VYYKDSSF------VSASRQTRLNRSSSSTQTIYETALSLLHELWD-GRPLRLLGVRGSE 349 Query: 350 FFSQGV-AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW--QMKRAM 406 Q++LFD +QL +D + K G ++ A + + +R+ Sbjct: 350 IDKDSGSYQMDLFDAGK-NRKLDQLDAAVDQIRDKFGDSSIRRAVFLGADETDLKKRRSN 408 Query: 407 LSPR 410 S + Sbjct: 409 RSRK 412 >UniRef50_A3VP13 DNA polymerase IV n=5 Tax=Alphaproteobacteria RepID=A3VP13_9PROT Length = 422 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 85/401 (21%), Positives = 152/401 (37%), Gaps = 23/401 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AF+A+ E P L KPV+V + G V A++ G+ P FK K L Sbjct: 35 IAHVDCDAFFAAIEKRDDPSLVDKPVLVGGGHRGVVSTCCYIARSYGIHSAMPMFKAKAL 94 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 + V Y + + ++ + L+P ++ SIDEA+ DL G Sbjct: 95 CPQA--VIVPPRGAAYREAAAQIRDLMAPLTPLIQPVSIDEAYLDLGGTERLHGAIPAQL 152 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++ V + +T+ +G++ K LAK+A+ K L ++ Sbjct: 153 LAKLAKDVETQIGITLSIGLSVNKLLAKIASDFDKPRG------FTLIGGTEAANFLAPY 206 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P + GIG R S+KL G +T+ DL R + + GE + Sbjct: 207 PPGLLPGIGTRFSEKLMRDGFRTLGDLQHCSTRELVDRYGEHGLTLRARACGEDPRPV-T 265 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + +F I D ++ + + A + + + + + R ++ +KT+ F Sbjct: 266 VDRETKSVSGETTFRADIGDAAALEDHLYAMARKVSSRAKEKGLAGRVVTLKLKTARFR- 324 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH---RYQKAGVMLGDFFSQGVA 356 + L + +R I + A L A Q G Y+ G + D V Sbjct: 325 -----TFTRRQTLPHASNLTRVIFDCARAMLTAELQKGRTPVTYRLIGAGISDLVPAEVM 379 Query: 357 QLN-LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 LF ++ + + +D LNA+ G ++ Sbjct: 380 HDGYLFAED--LEKTGRREDAIDKLNARFGEDSIGTMRDRR 418 >UniRef50_Q654Y6 Os06g0691000 protein n=7 Tax=Poaceae RepID=Q654Y6_ORYSJ Length = 1125 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 69/422 (16%), Positives = 148/422 (35%), Gaps = 38/422 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN----NDGCVIARNAEAKALGVKMGDPWFK 57 D++ F+ S +P+L KPV V + + + N A+ G+K G + Sbjct: 379 IIHIDMDCFFVSVVIRNKPELHDKPVAVCHSDNPKGTAEISSANYPARNYGIKAGMFVRE 438 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K ++ +++ Y +++++ L + +V+ S DEAF D+T + + Sbjct: 439 AKARCPH--LMIVPYDFDAYGEVADQFYGILHKYCSKVQALSCDEAFLDMTECLHD-NPE 495 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + ++IR + T + GI+ +A+LA +AK + + E+ ++ Sbjct: 496 EVTQKIRNEIFGTTKCSASAGISGNMLIARLATRSAKPNGQCF------ISSEKVDGYLN 549 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQ 236 L + + GIG +S KL + ++ L + + K F + + RG Sbjct: 550 TLSIKALPGIGHTVSDKLKSKEVEYCGQLRNIPKESLHKDFGKKIGDMLWNYCRGIDHS- 608 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS- 295 + E + + ++G R D + + + +L R I+ +KT Sbjct: 609 VVEAVQETKSVGAEVNWGVRFNDNKDAENFLVNLSKEVCLRLEGCGVQGRTITLKLKTRR 668 Query: 296 -------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 F S S+ + T + + A + + + G+ + Sbjct: 669 KGAGEPIKFMGCGDCETVSRSMTIAGATDNPVTLQRIAKQLFSSFCVDVKEVRGVGLKIS 728 Query: 349 DFF--------SQGVAQLNLFDDNAPRPGSEQLMTVMD-------TLNAKEGRGTLYFAG 393 QG + + + + + G G++ +G Sbjct: 729 RLEHADLARGAPQGNMLESWLASPSDKLKKHSTEKACLLKNRDDAATSERRGFGSIRPSG 788 Query: 394 QG 395 G Sbjct: 789 IG 790 >UniRef50_B0TQD1 DNA polymerase IV n=7 Tax=Bacteria RepID=DPO4_SHEHH Length = 358 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 67/351 (19%), Positives = 128/351 (36%), Gaps = 26/351 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FYA+ E P+L GKP+ V G + N EA+ GV+ Sbjct: 4 IIHVDMDCFYAAVEMRDFPELRGKPIAVGGRSDRRGVISTCNYEARQFGVRSAMASGYAL 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L ++ ++Y ++SN++ + E + +E S+DEA+ D+T +C T Sbjct: 64 KLCPD--LILVPGRMQVYKEVSNQIRAVFERYTDLIEPLSLDEAYLDVTESSHCKGSATL 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 IRA +L T LT GIA K LAK+A+ K + + E + + Sbjct: 122 MAEAIRAEILAETGLTASAGIAPVKFLAKIASDLNKPNGQY------VIRPEMIEEFVKT 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + G+G+ +KKL +G+ T D+ + + F + +G + Sbjct: 176 LPLIKIPGVGKVTAKKLADLGLHTCSDIQAYPEPKLVERFGKFGSVLIERSKGIDKRAIL 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS--EHQYCRFISTFIKTSP 296 ++ + + + I R + ++ + + +K Sbjct: 236 P-NRERKSVGVETTLAKDIHTLEQCRAVMPQLIQELGARVSRSAKDRAINKQVVKLKFED 294 Query: 297 FALNEPYYGNSASVKLLTPTQ--DSRDIINAATRSLDAIWQAGHRYQKAGV 345 F + + ++++ + G R V Sbjct: 295 F----------KQTTIEHRSDEISVNLFYQLLEQAMERQHERGIRLLGVSV 335 >UniRef50_Q72MY7 DNA polymerase IV n=18 Tax=Bacteria RepID=DPO4_LEPIC Length = 364 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 83/370 (22%), Positives = 154/370 (41%), Gaps = 26/370 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P+ GKP++V N+ V A + EA+ GV+ P K Sbjct: 8 IIHVDMDAFYASVEQRDFPEYKGKPLIVGGPPNSRSVVSAASYEARKFGVRSAMPCSKAA 67 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L + + +E+Y ++S ++ E + VE+ S+DE + D+T +N Sbjct: 68 QLAPQA--IFVFPRFEVYKEVSKQIREIFLEYTDLVEMLSLDEGYLDVTFNKKNIPFAVT 125 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +EIR + +RT LT G+ +K ++KLA+ K + + + + Sbjct: 126 IAKEIRTEIFKRTELTASAGVGNSKFISKLASEKNKPNG------LTVVLPDDVISFIDP 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV G+G+ ++K+ +GI T DL I + +HF + + RGE ++ Sbjct: 180 LPVSSFHGVGKVTARKMKELGIYTGKDLRTKSIDELVQHFGKMGIYYYKISRGEDERMVQ 239 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F DY + + + A +L + + ++ IK F+ Sbjct: 240 SS-RERKSLGAESTFDRDKLDYDDLLKQLKDVAVVVERRLEKKDFAGKTLTLKIKFYDFS 298 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG-------HRYQKAGVMLGDFF 351 L + S L P + ++ + A + ++ + G+ L Sbjct: 299 LK------TRSKTLSEPIFKADELYSTAIELFEEFFEIKYGKKSAIKAIRLLGISLSHPN 352 Query: 352 SQGVAQLNLF 361 S+ NLF Sbjct: 353 SEN-EDPNLF 361 >UniRef50_C4F8L3 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F8L3_9ACTN Length = 432 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 99/402 (24%), Positives = 162/402 (40%), Gaps = 25/402 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 L D++AF+AS E + P+ GKPV+V + G V + EA+ GV+ + K Sbjct: 23 IGLMDLDAFFASVEQLDHPEWRGKPVIVGGSPEKRGVVSTCSYEARVYGVRSAMSSAQAK 82 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L + +++ Y +MS RVM+ L + +P V+ SIDEAF D++ G Sbjct: 83 RLCPEA--IWTPGHFDRYREMSARVMAILADETPFVDRVSIDEAFFDISPGRFCDEHPIQ 140 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I V + +T +G+ + KT+AK+A+ K + + + ++ Sbjct: 141 IAQRISRRVSE-LGITCSIGLGRNKTVAKIASERDKPRG------LTIVTPGTEHGFLAP 193 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + GIG L +GI+T+ LA+ + F + E R G ++ Sbjct: 194 LPVRAMSGIGAAAESALARVGIRTLGQLAEASDGLLSPIFGINTELVRRRAAGLEVSEVR 253 Query: 239 EFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + I R+F +TD ++ AI + +LR R ++ +K S Sbjct: 254 AIDAPDDVKSISNERTFAHDLTDPSDVKAAIQLLSESVGARLRRRGLAGRTVTLKLKYSF 313 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-QGV 355 + KL T D A L +IW G + AGV + DF Sbjct: 314 GEGR------TIQRKLAHATDDENVFGAVARDLLASIWTEGMHIRLAGVGVSDFGPDPHG 367 Query: 356 AQLNLFDDNAPR----PGSEQLMTVMDTLNAKEGRGTLYFAG 393 Q +LF R L +D L + G + F Sbjct: 368 IQTDLFCAVDERGAMASDKRDLAVTLDALRERFGNDAVAFGR 409 >UniRef50_A8RBK8 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RBK8_9FIRM Length = 389 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 91/403 (22%), Positives = 165/403 (40%), Gaps = 23/403 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+N+F+AS E + L G+PVVV + V + EA+ GV P Sbjct: 5 VIFHIDLNSFFASAEVLKNSALEGQPVVVAGMHRRSVVSTASYEARNYGVHSAMPLHMAL 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 + + +V +Y Y ++S R + ++ SP +E SIDE + D+T D Sbjct: 65 EKCPQ--LVVVQGDYAWYEELSRRFFNYVKRFSPYLEPASIDECYIDVTEAIRAYKRPLD 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+ V + L +G+ +K LAK+A+ K + + + + + Sbjct: 123 LAWRIQKGVYEDLRLPCSIGVGPSKFLAKMASDMRKPMG------ITVLRRQEIERKLWP 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLA-DTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L + D++GIG++ L+ GI T+ D A + I + ++ RG +L Sbjct: 177 LSIADMFGIGKKTVPLLERQGIYTIGDFANPANEAKIMALMGKHAYQLIQNARGFGSNRL 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + + Q I S + I +Y ++ A + +++ + E IS I+ + F Sbjct: 237 D-YNTSVQSISQSTTLDTNIVEYEEVKSVFKRLANKLSQRAKQEDLRGALISISIRYADF 295 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA- 356 S + T D+ ++ A D G + G+ LG FS+ Sbjct: 296 TNAV------RSTTISEYTNDADVLLEHALLLFDQHNN-GKEIRHLGIGLGSLFSKTRTV 348 Query: 357 -QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 Q+NLF D P ++ LN + G L A + +++ Sbjct: 349 DQINLFQDVKAEPTDST--DILKQLNKQLSTGKLMKASELLKK 389 >UniRef50_A8YTI5 DNA-damage-inducible protein n=29 Tax=Lactobacillus RepID=A8YTI5_LACH4 Length = 406 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 75/369 (20%), Positives = 144/369 (39%), Gaps = 20/369 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-----NNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYAS ET P+L K +V+ G V N A+ GV P Sbjct: 49 IIHLDMDAFYASVETQRNPELKNKALVIGQDPRNNGGHGVVATCNYVARKYGVHSAMPAI 108 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD- 115 K L + +V +++ Y +S ++ S + E++ +VE ++DEA+ D+T + ++ Sbjct: 109 KAVKLIPKSELVFVRPDFKKYRSVSAKIHSFMHEITDKVESIALDEAYLDVTHNKLGQNL 168 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 ++ + L G++ K LAK+ + AK + R + ++ Sbjct: 169 AVQVAIGLQRRIRTELGLNSSFGVSYNKFLAKMGSEYAKPFGR------TVILPYEAKQF 222 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + ++ G+G + ++L MGI T DL + K F + + G Sbjct: 223 LGMQKIEKFPGVGPKTQEQLHEMGIYTGADLQKVADFVLIKKFKKMGYFLAQHAHGIDLR 282 Query: 236 QL-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + ++ I R++ I I Y ++L+ + + + + ++ Sbjct: 283 PVIADSDTNRKSIGMERTYEPAIYTRDEALTHIRHYCKHLEDELKKRNFFAQTVVIKVRD 342 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI-WQAGHRYQKAGVMLGDFFSQ 353 + F + KL P+ D ++A D + GV + DF Sbjct: 343 NDF------DTVTKRRKLTKPSNSQYDYYDSARELFDKTSNFLEKGIRLIGVTVTDFKKD 396 Query: 354 GVAQLNLFD 362 +NLFD Sbjct: 397 EYQTINLFD 405 >UniRef50_B9YDA2 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDA2_9FIRM Length = 469 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 92/405 (22%), Positives = 169/405 (41%), Gaps = 21/405 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFKQ 58 D+N YA E + P+L +P+ V + G ++A+N AK ++ G+ + Sbjct: 52 IVHSDINHCYAQIEEMLNPELKQRPMAVGGSQEERHGIILAKNLHAKKYKIQTGETLDEA 111 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-T 117 + + ++ +Y Y ++++V + E + RVE Y +DEA+ DLT + + Sbjct: 112 RIKCPQ--LLILPPDYRRYQRITDQVKAIYREYTDRVEEYGLDEAWLDLTQSQRLFGPAS 169 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 R I+ V LT+ +G++ K AK+A+ K ++ + Sbjct: 170 QIARTIQQRVYAELGLTISIGLSFNKIFAKMASDFVKPSG------FVTITRANFQEKIY 223 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V +++ +G KKL+A GI T+ DLA D +F+R++F V E GE ++ Sbjct: 224 PLSVRELFYVGAATQKKLEAWGITTIGDLASRDRQFMRRYFGKVGEMLHWFALGEDISEV 283 Query: 238 --EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 A + + S + + + R + A A +LR + + I+ ++ Sbjct: 284 ALASEAIPVKSVGNSVTAVHDLHTHGEARLVLRVLAESVASRLRDQGLKGKGIALSLR-- 341 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-SQG 354 + + S K PTQ + +I+ A L WQ + G+ + D Q Sbjct: 342 ----DIHLFRWSLQRKRARPTQLAEEILEDAEILLRQAWQNALPLRSIGISVFDLCLDQT 397 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 QL+LF D R QL +D + + G + + + Sbjct: 398 GEQLDLFVDEQHRQSLLQLEKTVDGIRRRFGFEKIQRCSLLLDKP 442 >UniRef50_C9M6E1 UmuC protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6E1_9BACT Length = 429 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 134/408 (32%), Positives = 206/408 (50%), Gaps = 7/408 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + LCD + F+ SCE VFRP+L G+PVVVLS+NDGCVI+R+ EAK LG+ M P+FK Sbjct: 7 LIGLCDGDNFFVSCERVFRPELNGRPVVVLSSNDGCVISRSNEAKRLGIPMCAPFFKIAP 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L RR G+ S N E+Y +MS+R+M+ + + S +VE YS+DEAF +L+ + + D Sbjct: 67 LVRRHGMTALSGNMEMYREMSDRMMAVIAQFSDQVEQYSVDEAFFNLS-IASLTDPAAHC 125 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +R T+ +R L V +G A +KTLAK A+ K V L E ++++P Sbjct: 126 LALRRTIARRIGLPVSIGAAPSKTLAKAASEMTK----GKEPGVRLIRPEETACAVASMP 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ VWGIG+R ++K+ + GI+ V L +++ HF++ + ELRG L Sbjct: 182 VERVWGIGKRTARKMLSFGIRLVPQLTARPNGWLKGHFSIREVQIADELRGLKRFPLSSQ 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 T Q I +R+ + + + + +LR H + FI+TS F+ Sbjct: 242 EETPQSIQVTRTSAGPLRTEDELWDGLIRHILGGTARLRRHHLAAGRMELFIRTSYFSSQ 301 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S+ PT D + A + L ++Q G Y+ +GV D QL Sbjct: 302 SRF--ASSRASFSPPTDDDLACLRAGRQILSRVFQPGWNYRASGVRFSDLSPSQPRQLTF 359 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 D +LM +D LNA G GT+ A + + + +M S Sbjct: 360 ADQLPGTRKRHRLMEAVDALNADLGAGTVLPAALLSKNRSAAQHSMTS 407 >UniRef50_B0BPX9 DNA polymerase IV n=222 Tax=cellular organisms RepID=DPO4_ACTPJ Length = 356 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 78/371 (21%), Positives = 136/371 (36%), Gaps = 31/371 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FYA+ E P L GKPV V + G + N EA+ G+ P + Sbjct: 7 IIHIDMDCFYAAIEMRENPALIGKPVAVGGSVEGRGVLTTCNYEARKFGLHSAMPTAQAL 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 ++ N LY +S ++ + VE S+DEA+ D+T R C T Sbjct: 67 KRCP--NLILVPVNMPLYKAVSEQIHQIFRRYTDIVEPLSLDEAYLDVTDCRQCSGSATW 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +EIR + HLT GIA K LAK+ + K + + + E + Sbjct: 125 IAQEIRDAIWNELHLTASAGIAPLKFLAKIVSDQNKPNGQF------VISPENMTAFIYD 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + G+G+ ++KL +G+ T D+ +D FI K F +R ++ Sbjct: 179 LPLKKIPGVGKVTNEKLAQLGLHTCGDIQHSDKAFIYKTFGKFGQRLWEFSHAIDNRKI- 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH-----QYCRFISTFIK 293 E ++ + + I Q + + +L+ Q + ++ +K Sbjct: 238 EANRPRKSLAVENTLPTDIWHLAEAEQIVDELFKKLVFRLQRNWGERSLQEFKKLAIKLK 297 Query: 294 TSPFALNEPYYGNSASVKLLTPTQ--DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 F L T I + + + G+ + Sbjct: 298 FGDFT----------QTTLERTTDGLSRERFIELLQQVWQRTNR--RSVRLIGLSVHYPT 345 Query: 352 SQGVAQLNLFD 362 + QLNL++ Sbjct: 346 EKVKKQLNLWE 356 >UniRef50_A7I5X9 DNA-directed DNA polymerase n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I5X9_METB6 Length = 365 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 87/368 (23%), Positives = 150/368 (40%), Gaps = 21/368 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D++ FYA+ E P++ GK VVV G V + EA+A GV+ P Sbjct: 12 IVLHADMDCFYAAVEMHDHPEIAGKAVVVGADPQGGAGRGVVSTASYEARAFGVRSAMPI 71 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + L G V + YA +S +M +E RV+ SIDEAF D++ VR+ Sbjct: 72 SQAYRLCP--GAVYLRPDMARYAAVSAEIMGIFKETGYRVQQVSIDEAFLDISPVRSFDT 129 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 D ++ T+ R +T +G+A +K +AK+A+ K + + R Sbjct: 130 ARDLAVRLKQTIRDRVGITCSLGVAPSKIVAKIASGHQKPDGM------TVVTPDSARDF 183 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 ++ LP+ + GIG + +++A+GI T+ +LA DI+ + F G Sbjct: 184 LAPLPIRKIPGIGGKTGAQIEALGITTIGNLATCDIQVLVGAFGRSAGLLREAALGHDNS 243 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ E + I +F D + + A+ + E + ++ ++ + Sbjct: 244 EVVER-DGVKSISKETTFANDTEDPKEIAATMELLVREVAQAIADEALQFKTVTIRVRYA 302 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + + LL D I AA L +W G ++ G+ L Q Sbjct: 303 GF------VSKTKARSLLHYHNDEAAIRAAAGELLRELWD-GKPIRRLGLRLSTLRHQDS 355 Query: 356 AQLNLFDD 363 Q LF Sbjct: 356 RQQTLFGS 363 >UniRef50_Q0FEJ5 DNA polymerase IV n=3 Tax=Rhodobacterales RepID=Q0FEJ5_9RHOB Length = 391 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 77/396 (19%), Positives = 140/396 (35%), Gaps = 18/396 (4%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 A D +AFYAS E P KP+++ G V A+ GVK P FK L Sbjct: 12 AHIDCDAFYASVEKRDNPKFKDKPLIIGGGQRGVVSTACYIARIKGVKSAMPMFKALKLC 71 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFG 120 + + + YA S + + ELSP +E S+DEAF DL G Sbjct: 72 PEA--IVIAPRMDAYAKASKEINEMMSELSPSIEPLSLDEAFIDLRGTEKLHGEPPALSM 129 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + ++ ++ VG++ K LAKLA+ K G + + ++ Sbjct: 130 ARLVQRIEKQLKISASVGLSYNKYLAKLASDLDKPRGFSIIGKY------KIEEFLAPKS 183 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + +WG+G+ +L+ GI+ DL + + + + + RG + Sbjct: 184 IGLIWGVGKVAQMRLEQDGIRIFADLQRRSHQELIDKYQNMGDHLWHLCRGIDNRNVI-A 242 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I +F I + + I + + +++ +S++ I+ Sbjct: 243 KNVIKSISKETTFSSDINNIEKLDGYIWRLSEQVSQRAKSKNLLGHVITLK------IKT 296 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + + S PTQ + I A R LD + G ++ GV + + Sbjct: 297 KKFKTISRRKTQREPTQIAEKIYAEARRMLDEVASEG-PFRLIGVGISNLIDADKIDQLN 355 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 D + + G+ + Sbjct: 356 DFLKTDEAKKADAERATDLIKKRFGKNAILKGRSLR 391 >UniRef50_B0TAW2 DNA polymerase iv n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TAW2_HELMI Length = 409 Score = 275 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 85/411 (20%), Positives = 147/411 (35%), Gaps = 19/411 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFKQ 58 L D+N+FYAS E P L G+PV+V G ++A + EAK GVK + Sbjct: 7 VLLADMNSFYASVEMAHNPTLRGQPVLVCGDPERRHGIILAASREAKRRGVKTAMTVGEA 66 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLT 117 + + VC LY ++S ++ LSP VE YS+DE F D+ G + D Sbjct: 67 RAICPDA--VCVRPRMSLYLEVSWQIQQIARTLSPLVEPYSVDELFIDVRGAEHIWGDAV 124 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + R V + + VG+ K L+K+A K + + + + Sbjct: 125 EAAGIFRQRVWEAVKVPCSVGVGPNKFLSKMACDVEAKKSPSGVALWRV---DDVEAKLH 181 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LP+ ++ +G R+ + MG+ T+ DLA + ++ + F + G + Sbjct: 182 PLPIGKMFMVGSRMERHFRNMGLLTIGDLAHYPVDYLMRRFGLRGAVYHNLAWGRDGSPV 241 Query: 238 EE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + S + + + + R + R +S ++ Sbjct: 242 RPDSLEQTKSVGHSVTLPRDYHHSDDIELVLLELTDEVCRRARKLGKAGRTVSVGLRAYD 301 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 G L +P+ S + A W G + V L G Sbjct: 302 LT-----RGFYRQTTLPSPSNLSGPVFEKAQLLFRRHWD-GRPVRTVTVDLSGLEEDGTL 355 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 Q LF D +++ MD + G + A + RA+ Sbjct: 356 QQELFRDMD---RQDRVSRTMDRIRDAMGTTAIVRASSLLPAGQARDRAVK 403 >UniRef50_A4BJD8 DNA polymerase IV n=1 Tax=Reinekea blandensis MED297 RepID=A4BJD8_9GAMM Length = 365 Score = 274 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 70/379 (18%), Positives = 144/379 (37%), Gaps = 24/379 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D + +YA+ E P+L G+PV V + N EA+ G+ P + Sbjct: 5 IIHIDCDCYYAALEMRDFPELRGRPVAVGGQGPRSVLSTCNYEARHYGLHSAMPSRRALS 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L G++ +++Y +S ++ + R+E S+DEAF D+T + Sbjct: 65 LCP--GLIIQPHRFDVYRAVSEQIRQIFSRYTDRIEPLSLDEAFLDVTDSTWFGGSASML 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IR ++Q T +TV GIA K LAK+A+ K + + E + +S+L Sbjct: 123 AEHIRQEIVQETGITVSAGIAPNKFLAKVASEWRKPNGLYS------ISPEAVDEFLSSL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G + S+KL G+ T D+ + + ++F + RG + Sbjct: 177 PLKKINGVGSKFSQKLAEHGLHTCGDVLRWSLPRLTQYFGKSGLWLYQRARGIDHRPVG- 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH-QYCRFISTFIKTSPFA 298 ++ + +F + + + +L ++ + + ++ + F+ Sbjct: 236 VRSDRKSLSVEHTFDTDLAGESACLTQLTPLLDTLNRRLAAKDPLPIKGVFVKVRFNDFS 295 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + L ++ AA + ++ + G+ + Q QL Sbjct: 296 ------TTTMERGLPCLRASYEQLLKAACQ------KSHRGVRLLGLGVRFEEKQSKDQL 343 Query: 359 NLFDDNAPRPGSEQLMTVM 377 L+ + L + + Sbjct: 344 ELWPVATAQGNRASLESSL 362 >UniRef50_B3WC63 DNA-damage-inducible protein P n=8 Tax=Lactobacillus RepID=B3WC63_LACCB Length = 367 Score = 274 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 70/364 (19%), Positives = 141/364 (38%), Gaps = 19/364 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYAS E P L K +V+ + G V N A+ GV P Sbjct: 16 IIHLDMDAFYASIEMRDNPQLRSKALVIARDPRTTGGKGVVTTANYVARRYGVHSAMPAN 75 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + L R +V S ++ Y +S ++ + +++ +E + DEA+ D+T + Sbjct: 76 EALQLVPRSKLVFKSPDFPKYKAVSAQIHALFHQVTDLIEPVAFDEAYLDVTANKMFPST 135 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 ++ + Q T LT +GI+ K +AK A+ K R L E+ + Sbjct: 136 IALALWLQDQISQATQLTSSIGISYNKFIAKQASDYNKPVGR------TLVLPEQALLFL 189 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP+ G+G++ KL +G+ L + + F + + RG Sbjct: 190 DRLPIKQFRGVGKKTLPKLTDLGVTDGKSLRALSQDDLLRMFGKMGFVLYQHARGVDNRP 249 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + T + I R++G +TD +++ + + A L + + + + ++ Sbjct: 250 V--AVRTAKSIGKERTYGTPLTDAEAVQTQLHNLAGMVVTSLNQKAMHGKTVVLKVRDVD 307 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + + + + I +AA + ++ + + G+ + + Sbjct: 308 F------ITQTKRLTQDHYFEGEQAIFDAAWQLWGSVAMSNLAIRLLGITVTGLDPKQYE 361 Query: 357 QLNL 360 L+L Sbjct: 362 NLDL 365 >UniRef50_Q9AK82 DNA polymerase IV n=34 Tax=Bacteria RepID=DPO4_STRCO Length = 479 Score = 273 bits (699), Expect = 6e-72, Method: Composition-based stats. Identities = 96/379 (25%), Positives = 147/379 (38%), Gaps = 23/379 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E +P L GK VVV G V + EA+ GV P + + Sbjct: 7 ILHLDMDAFFASVEQASKPSLRGKAVVVGGLGPRGVVATCSYEARVFGVHSAMPMGQARR 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF- 119 L + +ELY +S +VM L ELSP VE S+DEAF DL RD Sbjct: 67 LAPHAAYLV--PRFELYRSISEQVMRLLRELSPLVEPLSLDEAFVDLDAGGAARDAETAR 124 Query: 120 --GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 G ++R + T LT VG+A +K LAK+A+ AAK + L +R ++ Sbjct: 125 LAGTKLRTDIRTVTGLTGSVGLAASKMLAKIASEAAKPDG------LVLIPPGTERAMLE 178 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQ 236 + V + G+G L GI TV ++A+ + + Sbjct: 179 PMTVRTLPGVGPATGDHLRRAGITTVGEIAEAGEDELVRLLGKAHGHALYAMALARDERP 238 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + ++ I D + + A R +LR+ R I ++ Sbjct: 239 VVAE-RETKSVSVEDTYDVDIHDRVRVGVEVGRLADRCVRRLRASGLSGRTIVLKVRRYD 297 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F+ + S L PT D + AA R LD++ G + GV + Sbjct: 298 FS------TLTRSETLRGPTDDPAVVREAAARLLDSVDTTG-GVRLLGVGVSGLADYTQE 350 Query: 357 QLNLFDDNAPRPGSEQLMT 375 +LF A E Sbjct: 351 --DLFAQAAGDRAEEPAEE 367 >UniRef50_B0MAH2 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAH2_9FIRM Length = 402 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 158/410 (38%), Gaps = 28/410 (6%) Query: 1 MFALCDVNAFYASCE-------TVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVK 50 + DVN+ Y S E DL P ++ + G V+A + AK G++ Sbjct: 7 VIFHIDVNSAYLSWEAVYGISVRKDEVDLREVPSIIGGDESKRRGIVLAASIPAKKKGIR 66 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 + + + ++ + +Y S + + SP +E +SIDEAF D+T Sbjct: 67 TAETVREALNKCPD--LIIRPPCHGMYDKFSKAFLKEALKFSPVLEKFSIDEAFLDMTET 124 Query: 111 R-NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + + ++ + ++ TV +G+A K LAK+A+ K + T Sbjct: 125 VGQYKSPYEAACLLKDRIYEKLGFTVNIGVAPNKLLAKMASDFEKPNKVHT------LFR 178 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRE 228 E M LPV+++ +G KKL +GI+T+ +LA + ++ H N + Sbjct: 179 EEVPNKMWPLPVENLLFVGPATKKKLHNLGIRTIGELAHINPELLKSHIGNKHGIQIYEY 238 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G +E + S + I + S A A +LR++ I Sbjct: 239 ANGIDRAPVEAQQADSKGYGNSITLPSDIDSLEEADTVVLSLAETVASRLRADRVKASCI 298 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + IK F +S KL PT + +I+ AA ++ G + GV Sbjct: 299 TVEIKDCQFR------RSSHQKKLFAPTDITNEIVQAAKELYREKFR-GTSVRLIGVRAS 351 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 D + AQ++ F + + L +D + K G+ + A + Sbjct: 352 DITKEEFAQMD-FLSDKKKEKLRMLDQSIDAIRIKYGKDAVQRARFLGGK 400 >UniRef50_C7RGQ0 DNA-directed DNA polymerase n=5 Tax=Anaerococcus RepID=C7RGQ0_ANAPD Length = 345 Score = 273 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 158/362 (43%), Gaps = 21/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D +AFYASCE + P + P+ V +N + N +A+ G+ P F K+ Sbjct: 4 IFHVDCDAFYASCEELRNPKMKNHPLAVGGLSNKSILTTANYKAREFGLHSAMPVFIAKE 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ +++ Y S V S ++E + +E S+DEA+ + Sbjct: 64 LCP--NLILLPVDHKYYRKKSKEVFSLVKEYAKLMEQVSVDEAYL----LVETDSPKKLA 117 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R+++ VL++T + + +GI+ K LAKLA+ K E + + Sbjct: 118 RKLQEEVLRKTGIGISIGISYNKFLAKLASDWQKPHGITQ------IRKEDLDYFLPNIS 171 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ V GIG++ S++L+ +GI V DL D ++ +F +RG ++ Sbjct: 172 VNKVHGIGKKTSERLNKIGIYKVEDLLKLDYEYLIDNFGKQGAYIYHVIRGVDDRKINPS 231 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ I R+F + D + + + + +++ ++ + ++ IK + F + Sbjct: 232 -RVRKSIGKERTFAQNTNDMAILTSYLKNLSELIEDEMDIKNIQGKTVNLKIKDAKFKNH 290 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S+ L P ++DI N A L+ + + G + G+ L + + + QL+ Sbjct: 291 ------TRSITLQEPIYRAKDIYNEALSLLEDLHK-GEMLRLIGISLSNLQERKLNQLSF 343 Query: 361 FD 362 D Sbjct: 344 LD 345 >UniRef50_C3Y6K1 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3Y6K1_BRAFL Length = 1191 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 75/414 (18%), Positives = 138/414 (33%), Gaps = 72/414 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG------------------------- 35 + D++ F+ S P+L GKPV V + Sbjct: 380 VVMHLDMDCFFVSVGLRNHPNLRGKPVAVTHSKGKGHEQKIRPGMDPEYERAYWEKRAPH 439 Query: 36 --------------------------CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVC 69 + + + EA+ GVK G L + Sbjct: 440 RHSITDKTEDNATRGNAQRDTYMSFSEIASCSYEARKAGVKNGMFMGPALKLCPDLKTI- 498 Query: 70 FSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DFGREIRATV 127 ++E Y +++ + L + +E S DEAF D+T + T D +R + Sbjct: 499 -PYDFEGYKEVAQEMYGILASYTHEIEAVSCDEAFVDVTDILADTGATPDDLATVLRKEI 557 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI 187 L++T VG+A + LA++A AK + E +S V ++ G+ Sbjct: 558 LEKTQCPASVGLASSVLLARMATKRAKPNGQFY------LPPEEVLDFVSPQTVRELPGV 611 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQE 246 GR + +L MG+ T DL + +++ F + R RG+ QL+ ++ Sbjct: 612 GRSLESRLKVMGVVTCGDLQKVTLPTLQREFGPKTGQALYRSCRGQDDRQLK-VERERKS 670 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPF 297 + ++G R T + + A +L+ + ++ + S F Sbjct: 671 VSAEINYGIRFTKDTEAETFMYNLAEEVQRRLQKAGLKGKTVTLKVMARKADAPVEPSKF 730 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + S S L T D + I A L + + G+ + Sbjct: 731 MGHGICDSLSKSSTLGLATDDHKVIGKEAWNILCQMKLLPSDNRGLGIQITRLV 784 >UniRef50_B9X9L4 DNA-directed DNA polymerase n=3 Tax=Verrucomicrobia RepID=B9X9L4_9BACT Length = 368 Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats. Identities = 78/348 (22%), Positives = 130/348 (37%), Gaps = 25/348 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AFYAS E P+L GKP++V G V A + EA+ GV+ P Sbjct: 4 VIFHLDMDAFYASVEQRDNPELRGKPLIVGAPPTQRGVVCAASYEARKFGVRSAMPSVVA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN------ 112 K L + Y SN++M + +E SIDEA+ DL+ V Sbjct: 64 KRLCPDG--FFIRPRMDHYRAESNQIMQIVAASGAIIEQVSIDEAYLDLSPVCQRSDLDS 121 Query: 113 -CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 +++ + LT +GIA K LAK+A+ K + L Sbjct: 122 SLLSAVPLAAQLKDKIFSERGLTTSIGIASNKLLAKIASDFNKPNG------LTLIPERD 175 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + +P+ + G+GR + L G++T+ DL D +R R G Sbjct: 176 KVLFLRPMPIRAIPGVGRVTEEMLKKSGVETIGDLQDFPGD-LRSMVGSFGPTLKRFSFG 234 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 E QL+ + I +F + D ++ + A A KL+ + + I Sbjct: 235 EDNRQLDT-GDVIKSISSENTFLKDTEDRKILKTCLREQAEEIAAKLKRKQIGAQTIQVK 293 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 ++ S F + + + P ++ DI L Sbjct: 294 LRYSDFT------TLTRQLSVEEPITEAADIYRLGCYLLAREKLVSRP 335 >UniRef50_C7QBJ0 DNA-directed DNA polymerase n=3 Tax=Actinomycetales RepID=C7QBJ0_CATAD Length = 834 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 92/398 (23%), Positives = 148/398 (37%), Gaps = 40/398 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E + +P L GKPVVV N G V + EA+A GV + Sbjct: 12 IFHVDLDAFYASVEQLHKPSLRGKPVVVGGIGNRGVVSTASYEARAFGVHSALATGIARR 71 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL----------TGV 110 + + Y S RVM+ + ELSP VE S+DEAF D+ T Sbjct: 72 RAPNAAYLI--PRFGAYQAYSERVMALMHELSPLVEPLSLDEAFIDISHLFGSLDTTTPH 129 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + ++R + T LT VG +K +AK+A+ A K + + Sbjct: 130 NATLEARRIAEDLRTRIKNETGLTASVGAGTSKLIAKIASDAEKPDG------LVVIEPG 183 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVREL 229 ++ + LPV +WG+G +++L +G TV DL + + Sbjct: 184 TEQTWLDPLPVRALWGVGPATAERLRKIGATTVADLRTLSLTELTTVVGASYGTTLYAIA 243 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 RG+ + + + ++ E + D ++ + R + ++R + R I+ Sbjct: 244 RGQDDRDVST-DREMKSVSVEDTYAEDLLDPATITAHMDDLVTRLSTRIRKAGRSGRTIT 302 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL----DAIWQAGHRYQKAGV 345 ++ F S S PT D I A R L A Q+ + GV Sbjct: 303 IKVRGHDFT------TVSRSETTPNPTDDLTTIRAATHRMLPGAVAAATQSVPGIRLLGV 356 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 L +LF E L + + Sbjct: 357 GLTGLAEWAQV--DLFTAA------EDLDAAL-EIWEH 385 >UniRef50_C2FXW7 Possible DNA-directed DNA polymerase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FXW7_9SPHI Length = 393 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 78/403 (19%), Positives = 156/403 (38%), Gaps = 21/403 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D++ F+ S E + GKP++V ++ V A + E + GV P Sbjct: 10 VAHLDLDTFFVSVERLKNTQFVGKPLIVGGMSDRAVVSACSYETRLYGVHSAMPMKLALR 69 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + + + Y+ S V + E P +E SIDE + DLTGV + F Sbjct: 70 LCPQA--IVIRGDMDSYSYYSRMVTDVVREYVPVMEKASIDEFYADLTGVDRFFGCSQFM 127 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 E++ V + L + +A K ++K+A AK ++ ++ ++ L Sbjct: 128 AELKQKVRKEVGLPISYALASNKLISKVATEDAKPDGKRE------VEHGLEKDYLAPLR 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++ + GIG + S L MG++T+ L++ + ++ R+ G + + Sbjct: 182 IERMPGIGNKTSGLLHQMGVRTIKVLSEIPVPMMQNLLGKNGVDLSRKANGIDFTPIVPY 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + ++ I +F + D ++ + R +LR + I+ ++ S F Sbjct: 242 S-EQKSIGTEETFEQDTIDIYYLKSELIRMTERMTFQLRQHRRLTGCITIKLRYSNF--- 297 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 S + + T +++ A ++ + GV QG Q++L Sbjct: 298 ---DTVSKQMVIP-YTASDAVLLSKAKELFAKLYDKRLLVRLLGVRFSHLV-QGQYQIDL 352 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 F+D L MD + + G + A + + + Sbjct: 353 FEDTVESVR---LYQAMDYIRQRYGDAVVKRAISVPKPPEKER 392 >UniRef50_C8NZM9 DNA polymerase IV n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZM9_ERYRH Length = 392 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 87/388 (22%), Positives = 163/388 (42%), Gaps = 20/388 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-GCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAFYAS + L+GKPVVV SN V + EA++ GV P K Sbjct: 4 VIFHIDINAFYASAHLITDSSLYGKPVVVCSNQRGSVVTTASYEARSFGVNSAMPLAHAK 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + +++LY ++S + M+ + S ++ SIDE + D+T V + D Sbjct: 64 RLCP--NLEVIEVDFDLYQELSVKFMNIIRSYSAVMQPASIDECYVDMTEVIKKYEKPLD 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EI+ + + L + +G+A K LAK+A+ K + + + + + Sbjct: 122 LAVEIQKNIWEALRLPISIGVAPNKFLAKMASDMQKPRG------ITVLRIREVSQKLWP 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L ++ ++GIG++ KL +GI+T+ DLA + ++ V + V++ G ++ Sbjct: 176 LSIESMYGIGQKTVPKLKQIGIETIGDLARFNPDHLKSILGVNAQNFVQKANGYDHSVID 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I S++F + +TD +R AI + ++ + + +S I+ + Sbjct: 236 TDVT-MKSIGQSKTFKDAMTDLDEIRNAILNELVEVKRRMERQDVVGKTVSFSIRLDDY- 293 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV--A 356 + S T+D + D G V + + + Sbjct: 294 -----KTATRSFTFDEYTRDQNLVFERLMSLYDEFEGEG-GVSFISVTMTNLLPKDEIIE 347 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKE 384 QLN+FDD ++ + + LN Sbjct: 348 QLNIFDDLDEITVNDIIQRLNKELNQDL 375 >UniRef50_Q46L62 DNA-directed DNA polymerase n=2 Tax=Prochlorococcus marinus RepID=Q46L62_PROMT Length = 425 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 146/423 (34%), Positives = 231/423 (54%), Gaps = 6/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D N FYASCE + P + GK +VVLSNNDGC+IAR++EA+ +G+ MG P+FK K+ Sbjct: 4 VILQIDGNNFYASCEQMIDPSIKGKGLVVLSNNDGCIIARSSEARRMGIPMGQPYFKLKN 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + + SSNYELY D+SNR+M L + +EIYSIDEAF + + L +G Sbjct: 64 KLNQLNINVRSSNYELYGDISNRLMQLLRKNCEELEIYSIDEAFGTIKRPKEKC-LYKWG 122 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +++RA V Q + + +GI +TK L+K++NH AKK + G+ D+ +E + + + Sbjct: 123 KDLRALVYQNIGIPISIGIGETKVLSKISNHLAKK-IQTNSGIFDIGRVENKDHYLDLIN 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 VD VWGIG+R+SK L GI +L D I+ + VV R EL+G C+ ++E Sbjct: 182 VDKVWGIGKRMSKWLKDRGITNARELRDMSSDQIKGKYGVVGLRIQNELKGNLCIPIKEN 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + ++EI SRSF I + QAI Y A+ KLR +Q I+ F T+ + + Sbjct: 242 SSDRKEICVSRSFAHPIDSLDDLSQAIIKYVLIASAKLRKYNQLSSAITVFTNTNTHSKD 301 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 ++ + A+ K+ PT +S+ +I + I++ + KAGV+L S Q + Sbjct: 302 --FFRSEATEKISVPTSNSKIMIEKSLSLTKEIFKPYKNFIKAGVILHKLQSNQYKQNLI 359 Query: 361 FDDNAPRPG--SEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 FD + ++L V+D +N+K G T+ + + +W +R LS TT ++ Sbjct: 360 FDAQNIKEELYLQRLDNVIDNINSKNGIDTINWGSSMMDTEWSPRRKNLSSIKTTNIENI 419 Query: 419 LRV 421 + Sbjct: 420 PTI 422 >UniRef50_D1YPB9 Putative DNA polymerase IV n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YPB9_9FIRM Length = 510 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 82/340 (24%), Positives = 144/340 (42%), Gaps = 18/340 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + P+ G PV+V ++ G V + EA+ GV P + K Sbjct: 5 IMHVDMDAFFASIEQLDHPEYKGHPVIVGGLSSRGVVATCSYEARKFGVHSAMPISRAKK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDF 119 L + + Y ++SN++ S ++E +P +E SIDEAF +++G+ Sbjct: 65 LCPDG--IYVYPRMDRYKEVSNQIFSIMKEFTPYIEPLSIDEAFLEVSGMSTMYSGPKAL 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 GR I+ V ++T L + G+A K LAKLA+ K + + R+RK+++ L Sbjct: 123 GRAIKDRVFEQTGLIISAGLAPNKFLAKLASDLDKPDG------LVVIPYGRERKVLAPL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTD-IRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ +WG+G R K L A G + + + +R G +E Sbjct: 177 PIKRIWGVGPRTEKILKAGGFHLMRHIQSLPDESTLIPLVGNQAKRIWELANGIDDRPVE 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 Q I ++ E +T+ ++ +A R +++LR Y +S ++ F Sbjct: 237 T-DRKTQSIGAEETYEEDLTEGRAIELEFRYFANRLSKRLRRRSLYGHTVSIKVRYDDFT 295 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH 338 S +L TP+ A + + Q Sbjct: 296 ------TVSRQKRLDTPSDHEHVFFETALLLWNKLMQDKM 329 >UniRef50_A1KUQ3 DNA polymerase IV n=34 Tax=Proteobacteria RepID=DPO4_NEIMF Length = 352 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 148/362 (40%), Gaps = 19/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E +P L G+PVVV + A + EA+ G+ K Sbjct: 6 IIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICAASYEARQFGLHSAMSVATAKR 65 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L + V +++LY +S ++ + + +E S+DEA+ D+T +N ++ Sbjct: 66 LCPQA--VYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLSLDEAYLDVTRNFKNIPYASEV 123 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +EIRA + T LT GIA K LAK+A+ K + + + + L Sbjct: 124 AKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQF------VLPPHKVMAFLETL 177 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G+ KK+ ++G++T DL + + HF R +RG ++ Sbjct: 178 PLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGRYGYRLYDLVRGTDERPVKA 237 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + +I + E + + A ++ ++ + ++ +KT F + Sbjct: 238 E-RERLQISTEITLPEDLP-LEQAAGHLPHLAEDLWRQITRKNVEAQSVTLKLKTYDFRI 295 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR-YQKAGVMLGDFFSQGVAQL 358 + ++ + D ++ AA + + ++ G+ +G + Q Sbjct: 296 ------ITRTLTYSSVLPDCAALLQAAQMLIARVPPQTEDAFRLIGIGVGHLVPKNQQQD 349 Query: 359 NL 360 Sbjct: 350 LW 351 >UniRef50_B2A4V8 DNA-directed DNA polymerase n=5 Tax=Clostridia RepID=B2A4V8_NATTJ Length = 421 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 102/403 (25%), Positives = 162/403 (40%), Gaps = 26/403 (6%) Query: 1 MFALCDVNAFYASCETVFRP------DLWGKPVVVLSN---NDGCVIARNAEAK-ALGVK 50 + DVN+ Y S E +R DL P VV + G V+A++ AK ++ Sbjct: 5 IIFHIDVNSAYLSWEAAYRLQKGAQLDLRQVPSVVGGDSQKRRGIVLAKSIPAKSKFKIQ 64 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+ + + NY+LY SN ++ L E SP ++ YS+DE F D T + Sbjct: 65 TGELLSSARKKCPD--LFVVPPNYDLYLRCSNAMVELLYEYSPFIQRYSVDEVFLDFTNM 122 Query: 111 -RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + D I+A V + TV +GI K LAKLA+ K + T Sbjct: 123 EKQFGDYLTAANTIKARVKEELGFTVNIGIGPNKLLAKLASEFKKPDRVHT------LFP 176 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 E + LPV +++ +GR KKL GI T+ +LA T ++ Sbjct: 177 EEIPTKLWPLPVGELFMVGRATEKKLLDRGITTIGELAKTPRNKLKLWLKSHGLLIWDFA 236 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G + + + S + E + D + R + S + + +LR H Y + ++ Sbjct: 237 NGIEESSVRPEGFPMKGLGNSTTTPENVADKETARLWLLSLTEKVSSRLRDAHCYAQVVN 296 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 IKTS F KLL PT ++ I + L+ +W + G+ L Sbjct: 297 LSIKTSQF------ISYGKQKKLLNPTNSTKVIFETGKKLLNELWDEEEPLRHIGISLSS 350 Query: 350 FFSQGVAQLNLFDDNAPRPG-SEQLMTVMDTLNAKEGRGTLYF 391 S QL++FD + E +D + AK G +L Sbjct: 351 LSSSKSYQLSMFDKLSIDTDSEESFYKAIDKIRAKHGETSLIR 393 >UniRef50_C5NXH9 DNA polymerase IV 1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH9_9BACL Length = 402 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 80/375 (21%), Positives = 156/375 (41%), Gaps = 23/375 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + A D+N FYAS E + P+L GKP+ + G ++ N EA+ LG+K Sbjct: 4 VIAHIDMNCFYASVEEKYNPELKGKPLAIAGEVKTRHGIIVTSNYEARELGIKTTMRVGD 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 + ++ + + Y S + + E + ++EI S+DEA+ DL+ + Sbjct: 64 ARKIYP--NIKILRPDMPKYQQESKLIFDLVREYTDKIEIVSVDEAYIDLSD---FSEPI 118 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 I+ + ++ + VG++ K AK+ ++ K + N + + ++ Sbjct: 119 KVIATIQRRIYKQLGMPSSVGVSFNKFFAKMGSNLKKPLG------FSIINKKNYKDILW 172 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L + ++ G G +KKL +GI T+ D+A + + V R + GE +L Sbjct: 173 NLDIGEMHGCGNASTKKLKKIGINTIGDIAVANEVILHSLLGVQGLRLKNKANGEGNSEL 232 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + ++ I S++F + D + + I + + + +++S IS ++ S F Sbjct: 233 K-YTVDRKSIGNSKTFTNDLIDEDDILKEIKKLSEKVSSRVKSRSYVGNNISIMVRFSDF 291 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV-- 355 + S K+ D+ DI N A L + + GV L + Sbjct: 292 ------KTITRSKKIPEFICDTNDIFNYAWELLLEHYDFTKGIRLLGVSLNEIKKVKGLK 345 Query: 356 AQLNLFDDNAPRPGS 370 QL++FD + Sbjct: 346 VQLDIFDKKDYKEEE 360 >UniRef50_A5Z8E0 Putative uncharacterized protein n=10 Tax=Clostridiales RepID=A5Z8E0_9FIRM Length = 428 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 82/433 (18%), Positives = 161/433 (37%), Gaps = 44/433 (10%) Query: 1 MFALCDVNAFYASCETVFRP----------DLWGKPVVVLSNN---DGCVIARNAEAKAL 47 + DVN+ Y S V D+ P ++ + G V+A++ AK Sbjct: 3 IIFHIDVNSAYLSWTAVKLLKEATKDEKKIDIRNIPAIIGGDREKRHGIVLAKSISAKKF 62 Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 G+ G+P ++ + Y + S+++M+ L +P +E S+DE + D Sbjct: 63 GIVTGEPIANALQKCP--NILIVPPEHGYYNEQSHKLMNLLRTFTPDIEQVSVDECYMDF 120 Query: 108 TGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL 166 +G++N +I+ TV ++ TV VGI+ K LAK+A+ K + T Sbjct: 121 SGIQNEYPSPLACAYKIKDTVKEKLGFTVNVGISDVKVLAKMASDFTKPDKVHT------ 174 Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 ++ M LPV++++ G+ L +GI + LA + + H + Sbjct: 175 LYRREIKEKMWQLPVEELYMAGKSSVNTLHKLGIYNIGQLATSPEYILEAHLKKHGKILW 234 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 G + + + S + + + + + + + + A +LR Q + Sbjct: 235 EYANGIDKSVVNTKREELKGVGNSITLPYDLDNMEEIEKILLQLSEKVAGRLRKGKQMAK 294 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA--GHRYQKAG 344 ++ +K + F S L T +I + +W+ + G Sbjct: 295 TVAVEVKYNDFIK------ASRQTTLDRCTDSGTEIYQLSKELFRELWEKDGNKSVRLLG 348 Query: 345 VMLGDFFSQGV-AQLNLFDDNAP-------------RPGSEQLMTVMDTLNAKEGRGTLY 390 + + QG Q+++ D A R ++L +D + K G + Sbjct: 349 IRTANLEEQGALEQMSIMDIMAQTTKKQQNATTNISREKMKKLDKALDAIKNKYGEDKIK 408 Query: 391 FAGQGIQQQWQMK 403 A +Q MK Sbjct: 409 RASLLAEQTVDMK 421 >UniRef50_Q0EYF1 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYF1_9PROT Length = 410 Score = 271 bits (692), Expect = 5e-71, Method: Composition-based stats. Identities = 108/393 (27%), Positives = 176/393 (44%), Gaps = 16/393 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AFYASCE P L G+P+ VLSN++ VIA++ +A+ALG++ G P ++ + + Sbjct: 10 IAHVDCDAFYASCEAARHPKLRGRPICVLSNHNAMVIAKSYDARALGIRTGTPVWEARRM 69 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DF 119 + ++ Y +S ++ S L SP VE+YSIDE F D G+R T + Sbjct: 70 APHAA--FLTPDFRYYGQISQQMFSILRRYSPVVEVYSIDEGFIDFNGIRQLWKKTYREL 127 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIR V +TV VG++ ++TLAK+A+ K V + ++ ++ L Sbjct: 128 ADEIRHAVWHELGITVSVGVSVSRTLAKMASEHHKPNG------VTVVPVQAIATFLAEL 181 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V ++ GIGR + L I+T L A D R +++ + EL G L LE Sbjct: 182 GVGEIPGIGRSRAALLCRKDIRTALQFARADERLLQRLIGRHGQMLRHELNGRAILTLEC 241 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P + + + S G + + +A R L ++ + F+ F Sbjct: 242 EPPLPKSMAKTASMGRISEKRRVIAAYLGYHALRLVADLVAKQLLVSRLYLFLTLESFEC 301 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 V L PT + I A +L ++ G RY+ GV+ + AQ + Sbjct: 302 RG------LEVGLDLPTNSLKRINGAVHHALGRLFIEGERYRGCGVVATQLQREAHAQPD 355 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 LF +QLM ++ +N + G + A Sbjct: 356 LFGLMREDLRQQQLMQAVNAINRRFGEQAISTA 388 >UniRef50_A8UAY3 ImpB/MucB/SamB family protein n=5 Tax=Bacilli RepID=A8UAY3_9LACT Length = 432 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 85/417 (20%), Positives = 170/417 (40%), Gaps = 20/417 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN----DGCVIARNAEAKA-LGVKMGDPWF 56 DV +FYAS E V R K ++V+ +N G V+A + AK LG++ + Sbjct: 13 IFCIDVKSFYASVECVERGLHPLKALLVVMSNADKPGGIVLAASPMAKKVLGIRNVTRKW 72 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR 114 + +V Y + + + + IYSIDE+F + G Sbjct: 73 EIPY---HPDLVIVPPRMSYYIKKNTEINDIFRKYVSDEDLHIYSIDESFISVRGSLKLF 129 Query: 115 ---DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + R I+ + ++T L V +GI +AKLA K+ + + + + Sbjct: 130 KKKSAYELARMIQYHIFKKTGLYVTIGIGDNMLMAKLALDNGAKYNSEL--IAEWRYEDV 187 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + + D+WGIG R ++L+++GIKTV DLA + +R ++ E+ G Sbjct: 188 PKTVWKIENMTDMWGIGSRTERRLNSLGIKTVYDLAHANFYQLRDSMGLIGEQLYANAWG 247 Query: 232 EPCLQLEEFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + ++ S+ + ++ I A + A ++R H +S Sbjct: 248 IDRSDIRDSYRPLEKSYGNSQILKKDYFKRQEIKIVIREMAEQVATRIRKHHCQTGCVSL 307 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 + S + G S +K+ + T +++ ++ + ++ ++ G+ Sbjct: 308 SVSYSKYEEK---DGFSRQLKIPS-TSNTKKLVEYCFEIFNKYYEDDKSVRRIGITYSKL 363 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QL+LF++ + +E+L ++D + K G +L A + + R+ L Sbjct: 364 SYTSDIQLDLFENPTEQITNEKLDLLVDKIRDKYGFQSLVHASSLMDGATAINRSSL 420 >UniRef50_Q6MCK0 Putative SOS mutagenesis and repair protein UmuC n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCK0_PARUW Length = 393 Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats. Identities = 145/395 (36%), Positives = 217/395 (54%), Gaps = 5/395 (1%) Query: 27 VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 +VVLSNNDGCVI+R+ EAK LGVKMG+P+F+ K L + FSSNY LY D+S R+M+ Sbjct: 1 MVVLSNNDGCVISRSQEAKLLGVKMGEPYFQIKALCEFRNIQVFSSNYALYGDISERIMN 60 Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 L E +P ++IYSIDEAF DL E++ V + + + +G+A TKTLA Sbjct: 61 LLFEHAPDLDIYSIDEAFLKYPSSVAPSDLVSLCHELQKKVKKWVGMPISLGLANTKTLA 120 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 K+AN AKK Q V N ++K++ + DVWGIGR + +KL+ M I T + Sbjct: 121 KMANDLAKKIQNFY---VFDLNSSVRQKVLQNYLIGDVWGIGRNLKEKLNGMNIHTAWEY 177 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 A D IRK V+ ER + ELRG CL+ +E + ++ SRSFG +++ + +A Sbjct: 178 AQMDPSIIRKRLGVIGERILWELRGVSCLESDEKVSK-KSLLYSRSFGHVLSEITPLSEA 236 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + +Y AEKLR++ + + F++ + +S + PT+D+ ++I AA Sbjct: 237 LSTYVYTVAEKLRAQGSLAKALYIFLEYQIQPGKKMRCYDSITEIFPAPTKDTGEMIKAA 296 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 R L+ I++ RY+K GV+L D + + +LF N P QLM MD LNA+ G+ Sbjct: 297 KRGLNKIFRREERYKKCGVILLDLLPESSSNSDLF-LNPVDPKRTQLMNTMDALNARFGK 355 Query: 387 GTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 L+F G W+ ++ S + L V Sbjct: 356 KKLFFGAMGTDVSWKSRKDCSSKHNPSNWQQLPIV 390 >UniRef50_D2A3T9 Putative uncharacterized protein GLEAN_14950 n=1 Tax=Tribolium castaneum RepID=D2A3T9_TRICA Length = 825 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 72/451 (15%), Positives = 142/451 (31%), Gaps = 59/451 (13%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------ 36 + D++ F+ S RP+L G PV V Sbjct: 209 VVMHIDMDCFFVSVGLRTRPELRGLPVAVTHARRAQLNPNKEREETVTLNMDRMPEGVEL 268 Query: 37 -----------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 V + + EA+ GVK G L + + ++E Y ++S + Sbjct: 269 RMIDGRSSMSEVASCSYEARKCGVKNGMFLGAAAKLCPQIKTI--PYDFEGYKEVSMVLY 326 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDL--TDFGREIRATVLQRTHLTVGVGIAQTK 143 TL + +E S DE + +++ + DL D+ IR + T G + Sbjct: 327 KTLASYTLNIEAVSCDEMYVEVSDLLKSYDLSVEDWANHIRDEIKTATGCPCSTGFGSNR 386 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 A+LA AK E ++ + + D+ G+G KL ++G++T Sbjct: 387 LQARLATKKAKPDGSYY------LKPEDVESYLAEIALADLPGVGYATLSKLKSLGLETC 440 Query: 204 LDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 D+ + +++ + E + + +G L + ++ + ++G R Sbjct: 441 GDVQVASLGVLQRELGAKMGETLLEQAKGIDRKPLN-YTHERKSVSAEINYGIRFKTINE 499 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLL 313 + S +L + ++ + T+ F + S S L Sbjct: 500 CYNFLESLGNEVWSRLNEIKMRAKTVTLKLMIRAADAPLETAKFLGHGLCDSVSKSQTLA 559 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 D + + D + + GV L L N + S+++ Sbjct: 560 HHISDVKILHREVRTLYDKMNVNYAELRGLGVQLTKLEKLAPINPTL--SNFLQQESKKI 617 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 D ++ GR + R Sbjct: 618 QPTGDKTASR-GRELVRPPSGEKVATRGRPR 647 >UniRef50_C5RD20 DNA-directed DNA polymerase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RD20_WEIPA Length = 372 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 148/365 (40%), Gaps = 20/365 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYA E P+ P+++ + G V N A+ LGV Sbjct: 18 ILHIDMDAFYAQIEMRDNPEYKSIPLILANDPRKTGGRGVVATANYLARNLGVHSAMSAA 77 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRD 115 + L + V + N+ Y +S ++ + + +VE + DEA+ D+T + N + Sbjct: 78 EALKLAPQA--VFVTPNFSKYRGVSQQLHQIFKRYTNKVEPVAFDEAYLDVTENIPNINN 135 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 E++ + + LT VGI+ K LAKLA+ K + + N E R Sbjct: 136 AIQLAHELQQIIYEELELTSSVGISFNKFLAKLASEHNKPSG------LTIINPEDIRSF 189 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + LP++++ G+G + ++K+ ++GI+ DL DT + F +RG Sbjct: 190 LDTLPINEMRGVGAKTAEKMISLGIRNGKDLYDTPQNKLADEFGKSGYIFYERIRGVDDR 249 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + ++ + R++G + ++ + AA+ L + + + I+ + Sbjct: 250 PVVWQ-RERKSMSKERTYGPFLDTEQAIMDELKDLAAKLTASLIKSQLHGKTLVLKIRDN 308 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + +L D +I +AA LD + H + G+ + + + Sbjct: 309 EFQT-----ATHRATRLDFFPNDEDEIYHAAQDILDELGGYHHAIRLLGLTMTNLAALSF 363 Query: 356 AQLNL 360 + L Sbjct: 364 ENVVL 368 >UniRef50_A3EWL3 Polymerase ATREV1-1105 n=8 Tax=rosids RepID=A3EWL3_ARATH Length = 1105 Score = 270 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 73/373 (19%), Positives = 135/373 (36%), Gaps = 27/373 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN----NDGCVIARNAEAKALGVKMGDPWFK 57 D++ F+ S R +L KPV V + + + N A+A GVK G Sbjct: 375 IIHIDLDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYGVKAGMFVRH 434 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 KDL + +V N+E Y +++++ L +V+ S DEAF D++ + + Sbjct: 435 AKDLCPQ--LVIVPYNFEAYEEVADQFYDILHRHCRKVQALSCDEAFLDVSDLSDVE-TE 491 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 IR +L+ T + GI T +A+LA AK + + E+ + + Sbjct: 492 VLASTIRNEILETTGCSASAGIGGTMLMARLATRVAKPAGQLY------ISAEKVEEFLD 545 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 LPV + G+G + +KL I+T L ++K F E RG Sbjct: 546 QLPVGTLPGVGSVLKEKLVKQNIQTCGQLRLISKDSLQKDFGVKTGEMLWSYSRGLDLRS 605 Query: 237 LEEFAPTKQEIICSRSFGERITDYPS----MRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + + I ++G R D ++ + + +L+ R + I Sbjct: 606 VTAVQ-ESKSIGAEVNWGVRFRDQQDVFILVQHFLQCLCKEVSLRLQGCEMIGRTFTLKI 664 Query: 293 K--------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 K + + S S+ + T D + + + + + G Sbjct: 665 KKRKKDAEEPTKYMGCGDCDNLSRSITVPAATDDIEVLQRISKKLFGSFCLDVKEVRGVG 724 Query: 345 VMLGDFFSQGVAQ 357 + + S + Sbjct: 725 LQVSKLDSADPSN 737 >UniRef50_B8GPZ5 DNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=B8GPZ5_THISH Length = 414 Score = 270 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 89/405 (21%), Positives = 161/405 (39%), Gaps = 24/405 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 L D+NAF+AS E + P+L G+PV + + C+I + EA+A GV+ G + + Sbjct: 9 IVLVDMNAFFASIEQLDHPELRGRPVGITNGQTGTCIITSSYEARAHGVRTGMRLKEARQ 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-F 119 L ++ + E YA +S +M+ LE ++P +E++S+DEAF D+T + + Sbjct: 69 LCPD--ILQIPARPERYARVSTDIMTALESVTPDLEVFSVDEAFLDVTHCQRLLGPPEVI 126 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R ++ TV + + L VG++ KT AK A K + + ++ + Sbjct: 127 ARRVKDTVREASGLPCSVGMSGDKTTAKWAAKQHKPDG------LTVIPPWEAAARLAPV 180 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV ++ GI I L+ G+ T D+A + + + F + R +G +E Sbjct: 181 PVTELCGIAGGIGGYLEQRGVYTCGDMAQLPVSELARRFGNLGRRIWLMAQGRDPTPVET 240 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + + + + + A + +LR ++ Sbjct: 241 RIAPPRSLGHGKVMPPGTRERAVILTYLEHMAFKVGTRLRRHDLLALRFFIGLRAD---- 296 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 Y + + T DSR + R L+ W +G + + + L Sbjct: 297 ---YGWIGGTYRTAVATDDSRQLNALCRRMLNEHW-SGEGVSQVQITALEPCPAAGQ-LE 351 Query: 360 LFDD-----NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 LFD A + VMD +N + G TL A + Sbjct: 352 LFDAGQAPGAADQARVRAAHGVMDAINRRYGEFTLAPARLLSRSD 396 >UniRef50_B0S0R3 DNA polymerase IV n=4 Tax=Clostridiales RepID=B0S0R3_FINM2 Length = 347 Score = 270 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 87/361 (24%), Positives = 156/361 (43%), Gaps = 19/361 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 F D++AF+ASCE + P L P+VV + G + N EA+ G+ P F+ K Sbjct: 5 FLHFDLDAFFASCEILDNPKLKHVPMVVGGRSQRGIITTANYEARKYGLHSAMPIFQAKK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + +V + ++E Y S +V L S +++ SIDE D++ +R D + Sbjct: 65 IVP--NLVIVAPDFEKYRRNSEKVFKVLSSFSNKIQKMSIDEGCMDISHIR--MDRLELA 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 I+ V +T L++ +GI+ +LAKLA+ K + + + ++ L Sbjct: 121 NLIQENVRIKTGLSISIGISYNMSLAKLASDWNKPHGIK------IITQDDIPNILLDLK 174 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V + GIGR+ +KL+ +GIK V DL D +R+ F E +RG QL+ Sbjct: 175 VGKIQGIGRKSEEKLNKIGIKKVSDLYDLSRNNLRELFGKFGEVIYDRIRGIDERQLD-L 233 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + ++ I +F + +Y + ++ ++ L ++ + I IK + F++ Sbjct: 234 SRIRKSIGVEYTFERDLKNYNELLNKASEFSEELSDDLHKKNIKAKTIRIKIKLNDFSV- 292 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S+ L DS DI + L + + G+ + QL Sbjct: 293 -----ITKSMTLEEYISDSSDIFRIV-KYLVVNTKIEKSVRLFGITAANLSDTTFEQLKF 346 Query: 361 F 361 Sbjct: 347 L 347 >UniRef50_C2KZY4 DNA polymerase IV n=2 Tax=Clostridiales RepID=C2KZY4_9FIRM Length = 418 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 88/366 (24%), Positives = 145/366 (39%), Gaps = 20/366 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AFYAS E P L KP+++ G V N EA+ GV+ + Sbjct: 14 IILHVDMDAFYASVEMRDNPTLKDKPLIIGAKPTERGVVATCNYEARKYGVRSAMNSKEA 73 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 L + V ++E Y +S + LE + +VE ++DE + DLT V Sbjct: 74 FRLCPKA--VFLYPDFEKYKAVSEELHEILESYTKQVEYIALDEGYLDLTEVAKDFSEAE 131 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 GREI+ V + LT VGIA KT AK A+ K G + E +L+ Sbjct: 132 KIGREIQRRVAEELRLTCSVGIAYGKTAAKTASEEKKPN-----GFFMIQRREDYVELLR 186 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 V ++ +G + +++L + GI TV DL + + +R + + G ++ Sbjct: 187 DRDVRALFTVGAKTAERLYSFGIYTVKDLQEKEKEVLR-LLGNQGKMLLELSYGIDHRKV 245 Query: 238 EEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + P Q I +F E +TDY + + + R + + Y R +S I + Sbjct: 246 VPYRPEDTQSISKEMTFQEDVTDYSFLDDVLFLLSFRVENRAKRYGLYARGVSLKITFAD 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + S + TQ + + A+ L I R + G Sbjct: 306 ------MKTITRSALISESTQSAFSLYKNASALLQQI--PRRRVRLIGEGFYHLEENEGR 357 Query: 357 QLNLFD 362 QL+ D Sbjct: 358 QLSFSD 363 >UniRef50_Q4ZWM4 DNA polymerase IV n=61 Tax=Bacteria RepID=DPO4_PSEU2 Length = 354 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 73/367 (19%), Positives = 137/367 (37%), Gaps = 26/367 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D + FYA+ E PDL GKP+ V + G + N EA+A GV+ Sbjct: 6 IIHIDCDCFYAAIEMRDEPDLAGKPLAVGGSAERRGVIATCNYEARAYGVRSAMSSRHAL 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L + + Y + S + + + + +E S+DEAF D++ + T Sbjct: 66 KLCPD--LTIVKPRMDAYKEASREIHTIFRDYTDLIEPLSLDEAFLDVSEAGHFSGSATR 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++IR V + H+TV G+A K LAK+A+ K + + ++ + +++ Sbjct: 124 IAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNG------LFVITPDQVEEFVAS 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G+ + KL +GI DL + + F ER G ++ Sbjct: 178 LPVTKLHGVGKVTADKLGRLGIVDCADLRSRSKLALVREFGSFGERLWSLAHGIDDRPVQ 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE--HQYCRFISTFIKTSP 296 + +Q + ++ + D + + + + ++ +K Sbjct: 238 NDSR-RQSVSVENTYDTDLPDLAACLEKLPDLLETLSGRMARMEGQYRPGKPFVKVKFHD 296 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG-DFFSQGV 355 F + L + RD+ + A + G + G+ + Sbjct: 297 F-----------TQTTLEQSGAGRDLGSYEQLLAQAFARGGKPVRLLGIGVRLHDLRAAH 345 Query: 356 AQLNLFD 362 QL LF Sbjct: 346 EQLELFS 352 >UniRef50_C4FTM8 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FTM8_9FIRM Length = 381 Score = 269 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 69/365 (18%), Positives = 149/365 (40%), Gaps = 21/365 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYA+ E P + KP+V+ + G V N +A+ G+ Sbjct: 27 ILHVDMDAFYANVEARDNPAIAYKPIVIAKHPKLTGGRGIVSTCNYKAREYGIHSAMTAA 86 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRD 115 + V + ++ Y ++S ++ + + + +E S+DEA+ D+T + + Sbjct: 87 EAFKRCPHA--VFIAGDWSHYQEVSQQIRTIFAQYTDLIEPMSLDEAYLDVTHNKLGIQS 144 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 T + I+A + +LT +G++ K LAK+A+ K + + + ++ + Sbjct: 145 ATHLAQRIQAQIKAELNLTCSIGVSYNKFLAKIASDYRKPFG------ITVVTPDQALEF 198 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + LP+D +G+GR+ GI T DL ++ + +HF + + ++RG Sbjct: 199 LDDLPIDKFYGVGRQSVPYFHQRGIMTGADLRAIELEDLIEHFGKMGKSLYYKVRGVHDA 258 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ ++ I +F + + + + A+ R E L++++ + + ++ I+ Sbjct: 259 PVQP-HRERKSIGKETTFIQFLAEEEGVLDALTQLTKRVVEILKAKNFHAQTVTLKIRYD 317 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + + L +P+QD I A + + GV Sbjct: 318 DFE------TLTRQLSLGSPSQDVEVISQAVQELWELHGHLHKSVRLLGVSTAGLIQLDK 371 Query: 356 AQLNL 360 L Sbjct: 372 VHTQL 376 >UniRef50_Q2RNH1 DNA-directed DNA polymerase n=5 Tax=Alphaproteobacteria RepID=Q2RNH1_RHORT Length = 421 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 142/372 (38%), Gaps = 20/372 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D +AFYAS E P L +P++V G A+ G + P FK + Sbjct: 38 IAHIDCDAFYASVEKRDNPSLRDRPLIVGHPGGRGVATTACYIARRFGARSAMPMFKCLE 97 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L V + Y +S +V + + E + R+E S+DEA+ DL+ G Sbjct: 98 LCPEA--VVIPPDMAKYKAVSAQVRAIMLEATHRLEPLSLDEAYLDLSEGEHRFARPPAV 155 Query: 120 -GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I V + +TV +G++ + LAKLA+ K + + L++ Sbjct: 156 SLATIARRVEREIGITVSIGLSSNRFLAKLASDMNKPQG------FTVIDEAEAPALLAP 209 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 +PV + G+G ++L +G+ T+ DL + F + G + Sbjct: 210 MPVKRLHGVGAATERRLAELGLHTIGDLQGRPEADLLARFGKIGRALHAHAWGRGGRTIS 269 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I +F ++ P + +A+ + R A L + +KT F Sbjct: 270 P-DRETKSISAETTFERDLSRLPDLARALGPLSERVARALTRNALAGATVVLKLKTHDFR 328 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-Q 357 + + +L PT + I AA R L+ G R++ GV + D A Sbjct: 329 I------LTRHARLGDPTARAEVIAGAARRLLERETD-GRRFRLIGVGMADLRPGSEADP 381 Query: 358 LNLFDDNAPRPG 369 +LF + P Sbjct: 382 PDLFARSPPTAR 393 >UniRef50_A5G2F2 DNA-directed DNA polymerase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G2F2_ACICJ Length = 411 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 102/394 (25%), Positives = 155/394 (39%), Gaps = 21/394 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AFYAS E RP+L KPV+V G V A A+ GV+ P FK + L Sbjct: 37 IAHVDCDAFYASVEKRDRPELTDKPVIVGGGTRGVVAACCYIARLSGVRSAMPMFKARKL 96 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD--F 119 V + YA + + + + L+P V+ SIDEA DL+G Sbjct: 97 CPDA--VVIAPEMRKYAAAAAEIRALMATLTPLVQPLSIDEAALDLSGTAALHRAPPAVV 154 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 V +TV +G+A + LAKLA K G +++ Sbjct: 155 LSRFARQVEAEVGVTVSIGLAANRLLAKLAAERDKPRGFAVLG-------AEAAAVLAPE 207 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + G+G +++KL MGI V LA + R R RG ++ Sbjct: 208 PVGILPGVGPALARKLAGMGITRVGQLAALNDRAARARLGEDGPMLAARARGIDPRPIDP 267 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I +F E I D S+ + + + A +LR+E + +KT+ F Sbjct: 268 A-RATKSISAETTFAEDIDDAASLARVLFPLCEKLARRLRAEGFAAAGLVLKLKTARFET 326 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + +V+L PTQ + I AA L + AG RY+ G+ A Sbjct: 327 H------THAVRLTAPTQLAETIFEAAKPVL--MRAAGPRYRLIGIGAARLTDAAEADRG 378 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 D + + ++ L AK G G + G Sbjct: 379 DLVDQETPRRAAR-EDAVERLRAKFGTGIIRRGG 411 >UniRef50_B3E013 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E013_METI4 Length = 365 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 80/358 (22%), Positives = 148/358 (41%), Gaps = 21/358 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 +F D++AFY S E + P+ P+ V + G ++ + EA+ GVK G P + Sbjct: 26 LFFFVDLDAFYVSVERLRHPEYREMPMAVYTGSLNGRGVIMTASYEARKYGVKSGMPIRQ 85 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 G++ +++ LY + SN V S L+ S R+E SIDE + D Sbjct: 86 ALYHCP--GIMLVAAHPSLYEEYSNSVYSLLKRFSERIERVSIDENCLVVPSSI---DPE 140 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 I+A + + L +G+ K +AK+A AK + + ++ ++ Sbjct: 141 TTATAIQAAIGAKIGLPSSIGVGSNKLIAKMACDLAKPQG------IRVIPPGYEKAFLA 194 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV+ + G+G K AMGI T+ DL+ D + +R+ F +G L Sbjct: 195 PLPVEKIPGVGPATLKIFHAMGIVTIDDLSKVDEQTLREKFGKRGAYFYNAAQGIDKSPL 254 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + + +F I ++ +++ + S + A+ LR E + + ++ S F Sbjct: 255 QLERTP-RSLSREITFDRDIKNFSILQRVLVSLSRDLADSLRKEKLVAKTVFLKLRYSDF 313 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + N L +PT D +I L + + G+ L + ++ Sbjct: 314 STNL------RQFSLSSPTDDPTEIATCGLLLLKRNIKKEKALRLIGLGLRNLTAKTG 365 >UniRef50_Q2LSC9 Nucleotidyltransferase/DNA polymerase protein n=2 Tax=Syntrophus aciditrophicus SB RepID=Q2LSC9_SYNAS Length = 435 Score = 268 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 110/418 (26%), Positives = 178/418 (42%), Gaps = 19/418 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+ SCE P+L GKP ++ G V + AK GV G P + + + Sbjct: 15 ILHIDGDAFFTSCEEAIHPELRGKP-IIAGGERGIVACASYAAKKQGVMRGVPLHQARKM 73 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL--TDF 119 G+V S+YE Y+ S R+ + + +P+VE YSIDEAF D+TG+R Sbjct: 74 CP--GLVILPSDYETYSLFSRRMFNVMRRFTPQVEEYSIDEAFADITGMRRPLRASYETI 131 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 I+ + + +TV VG++ TK LAK+A+ K + + L Sbjct: 132 AVNIKNEIARELGITVSVGLSITKVLAKVASKHRKPNG------FTCIPGKSIAIYLEHL 185 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL-E 238 PV+ +WGIG + L MG++T L+ A ++K F RELRG+ + Sbjct: 186 PVEKIWGIGHATASYLHKMGVRTALEFARLPEVLVKKRFTKPGVEIWRELRGDSVYPVCA 245 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E I +++F D + + A K R H I+ F+K + F+ Sbjct: 246 EEKSLYASISKTKTFSPASGDADYLFAHLMRNLESACIKARRYHLAASRIAAFLKRNDFS 305 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 ++L P+ ++ A +++ G Y+ G++L + Q Sbjct: 306 YAG------REIRLNRPSVYPLELSIALRNLFIDVYRPGTLYRSTGIVLLELSGDSGTQY 359 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF-AGQGIQQQWQMKRAMLSPRYTTRS 415 LFDD + V D + AK G+ +L+ A I+ + KR + R TR Sbjct: 360 TLFDDVVRADRVRDIYRVTDEVGAKYGKHSLHLGASHFIELLGRGKRGEPTARERTRF 417 >UniRef50_Q5WYY8 DNA polymerase IV n=64 Tax=Bacteria RepID=DPO4_LEGPL Length = 355 Score = 267 bits (683), Expect = 4e-70, Method: Composition-based stats. Identities = 76/349 (21%), Positives = 139/349 (39%), Gaps = 25/349 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FYA+ E P+L KP+ V + + G + N A+ G++ P Sbjct: 7 IIHIDMDCFYAAIEMRDFPELANKPIAVGGDAKHRGVIATCNYAARQFGIRSAMPTAHAL 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L R ++ ++Y S + S L E + +E S+DEA+ D+T C T Sbjct: 67 KLCRE--LILRPVRMDVYQKESQYIRSLLTEYTDLIEPLSLDEAYLDVTESTQCQGSATW 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EIRA + Q LT GIA K+LAK+A+ K + + E + Sbjct: 125 IAEEIRARIYQTRQLTASAGIAPNKSLAKIASDWHKPNGQ------MVIRPEDVSAFVLD 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV ++G+G ++ +KL A+ IKT DL I ++ + F + +R RG + Sbjct: 179 LPVRKLFGVGPKMEEKLGALNIKTCADLQRYSIEYLLQKFGTMGQRLYELARGIDNRPVN 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ--YCRFISTFIKTSP 296 ++ I ++ + + + + + AR +++ + + +K + Sbjct: 239 PE-RIRKSISVEETYPKDLPNSEACLAVLPDLMARLEARIQRAGKISGIHNLFVKLKFND 297 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 F + D D+I + + G + G+ Sbjct: 298 F-----------QQTTIERVMDKIDLIVLRQLIQEGFARRGMPVRLLGI 335 >UniRef50_B5Y6A2 DNA-directed DNA polymerase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6A2_COPPD Length = 390 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 89/404 (22%), Positives = 149/404 (36%), Gaps = 30/404 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL------SNNDGCVIARNAEAKALGVKMGDPW 55 D++AF+ASCE P L GKP+ V+ + A + EAK GVK G P Sbjct: 4 IMHVDMDAFFASCEQAINPKLKGKPIGVMADPYGRGKKRSVIAAASYEAKRKGVKAGMPP 63 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + +L ++ ++ Y + N+++ +S VE YSIDE F G +D Sbjct: 64 KEAFNLCPD--LILVQAHPSFYGYVHNQMLKYARSISSEVENYSIDEFFMTYYG----KD 117 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 G EIR V ++ +T VGIA K LAK+A K + + + Sbjct: 118 PDKVGEEIRRYVKKQFGITCSVGIAPGKILAKMATEEGKPDG------LTWWKPQAIPSV 171 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 LPV + GIG R L+ GI T+ DLA T I+ ++ E + +G Sbjct: 172 YKYLPVSAIPGIGSRREALLNKNGIYTLEDLALTPKPIIKNLMGILGEYYQKIAQGIDET 231 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 L + I S + + + L + + + F++ Sbjct: 232 PLITQESPLKSITRSVTLDASTLSPLVVEAVGRLLCDSLGKGLEEINSRAKELFIFLRYD 291 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + +KL T D I + + + GV + D + Sbjct: 292 DMSAESTG------MKLEFYTNDPDVIFHNFKMLNKELRPYKQGVRLVGVGMTDI--RQH 343 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +LF + L V++ + + G ++ A + + Sbjct: 344 YTPSLF----YQEKPNPLKPVVEKIRQRYGYDSIIPANLLLAEP 383 >UniRef50_B1ZN03 DNA polymerase IV n=2 Tax=Opitutaceae RepID=DPO4_OPITP Length = 392 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 77/401 (19%), Positives = 141/401 (35%), Gaps = 20/401 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+ SCE +P+L G V G + + + EA+A GV P + + Sbjct: 6 IVHLDADAFFVSCELALKPELRGTKCAVGGRERGIISSASYEARACGVYTPMPTTRALKV 65 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL--TDF 119 ++ LY+ +S ++ E L+P V+ SIDE + DL Sbjct: 66 CPD--LIMLPHTGGLYSRVSRQMFELCETLTPLVQRNSIDEGYLDLGPCGFKTSAEIEQA 123 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++ + Q+ +T G+A K +A++A+ K + + + ++ L Sbjct: 124 VHGLQHKIEQQLQITASFGLAVNKLVAQIASKLRKPKG------FVVVPSGTEAEFLAPL 177 Query: 180 PVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ + G+G + ++L GIK V DL + F G +E Sbjct: 178 PIGKLPGVGPKTEERLVGRHGIKLVRDLLARGEAELEAIFGDGWREMRDGALGIDDRPVE 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + +F E I + + + + K+R + + R ++ ++ F+ Sbjct: 238 TEHEDAKSYSQQETFDEDIASFAEIERVVKRMIDELLPKIREDGKRVRTMTVKVRYPDFS 297 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 S L T T L W + V QL Sbjct: 298 QE------SHGRSLSAGTDLEAPFYPLVTPLLRQAWTKKRPLRLVSVRFSGVED-TPVQL 350 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +F N +L V+D LN + G + Q ++ Sbjct: 351 EMFAQNE--EKRRRLAAVLDHLNRRGGDAVVQHGHQLAKRP 389 >UniRef50_D1C5S0 DNA-directed DNA polymerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5S0_SPHTD Length = 394 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 95/387 (24%), Positives = 162/387 (41%), Gaps = 21/387 (5%) Query: 15 ETVFRPDLWGKPVVVLSNNDGCV--IARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 E + RP+L GKPV+V G A + EA+A GV+ P + L V Sbjct: 24 EILRRPELRGKPVIVGGRPGGRGVVAAASYEARAYGVRSAMPIAQAVRLCPHG--VFLPG 81 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDFGREIRATVLQRT 131 ++ Y ++S R + LE SP VE+ S+DEA+ DL+ + R I+ V + Sbjct: 82 DHAYYRELSGRFRAILERFSPLVEMVSVDEAYLDLSHSERSVGPPLEAARAIKRQVREEL 141 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 LTV +G+A ++ +AK+A+ K + L + ++ LPV+ + GIG + Sbjct: 142 GLTVSLGVATSRLVAKIASDLDKPDG------LRLIEPGAEAVTLAPLPVERMPGIGPKS 195 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 ++L +G+ T+ LA +R F + + RG + + I R Sbjct: 196 VERLQRIGVTTLGGLARMPAAALRPIFGRRADEVIARARGIDPRPVNPEREPAKSIGRER 255 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 +FG+ +TD + +A+ A R LR E R ++ ++ S F + Sbjct: 256 TFGQDLTDRHEIERALYHLAERTGRDLRREGLQGRVVAVKLRYSDFE------TVGRQRR 309 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 L PT D ++I A + + + + GV + QL +F D+ Sbjct: 310 LPRPTDDHQEIAEVAMDLVARLLEERQAPVRLLGVRVAGLGP-AAIQLTMFGDDPL--RR 366 Query: 371 EQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 +L +D L A+ G + A Sbjct: 367 HRLNHALDDLAARYHAGLVIPARVARH 393 >UniRef50_D0NDK9 DNA repair protein REV1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NDK9_PHYIN Length = 943 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 76/389 (19%), Positives = 136/389 (34%), Gaps = 27/389 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D++ F+ + +P+L PV V + + + N A+A GV G Sbjct: 256 VILHVDMDCFFVAVAVRDKPELQDVPVAVAHSSNAGSSEISSCNYSARAKGVGAGMFMQT 315 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K+L ++ ++ +S ++ +P V+ S DEAF + Sbjct: 316 AKELCPE--LIVLPYQFDDIQRVSFQIYDIFFSHTPYVQAVSCDEAFLEF---EKGTKGM 370 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + IR + ++T VG++ LAKL++ AK GV +S+ + ++ M Sbjct: 371 EKANAIRQEIFEQTGCPASVGVSFNILLAKLSSKKAKPD-----GVYAISDPSQAKEFML 425 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQ 236 L V D+ G G + KL+A+G++ L + + ER RG Sbjct: 426 QLKVRDLPGAGHMTAAKLEALGVEDARQLVSMTRTELVQSLGKAAGERLFNYARGVDMRP 485 Query: 237 LE-EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK-- 293 L E ++ + +FG R + + + + +LR+ + ++ IK Sbjct: 486 LSMESNMMRKSVSAVVNFGIRFDKWEDATVFLMALGEELSHRLRNLKVRTKCLTLLIKKR 545 Query: 294 -------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 S F + S S L PT D I A L + + GV Sbjct: 546 AEGAPIEPSKFMGHGVCDNFSKSQILAQPTDDEVVIGKACIELLRQLNFPSEDLRGVGVQ 605 Query: 347 LGDFF---SQGVAQLNLFDDNAPRPGSEQ 372 LF + Sbjct: 606 ATKLISDAPSKKKSGQLFKAWLEDSAQQS 634 >UniRef50_B7S1R7 ImpB/MucB/SamB family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1R7_9GAMM Length = 359 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 78/367 (21%), Positives = 135/367 (36%), Gaps = 18/367 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D ++FYAS E P L +PV V + G + N EA+ GV+ P + Sbjct: 6 IIHVDADSFYASVEMREDPSLAARPVAVGGSAQRRGVIATCNYEARKFGVRSAMPSSRAL 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L G++ S+ ++LY ++S + ++ + ++E S+DEA+ D++ T Sbjct: 66 QLCP--GLIILSARFDLYREVSQQFHQIFKDYTDKIEPLSLDEAYLDVSDCEQFHGSATL 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++IR + Q +LTV G+A K LAK+ + K E + + Sbjct: 124 IAQDIRRRIKQELNLTVSAGVAPNKFLAKVGSDWDKPDG------CFTITPEDVAEFVVD 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G + KL+ +G T +L + + K F R + G ++ Sbjct: 178 LPVSRINGVGAVTAAKLEKLGATTCGELQSIPLEVLVKRFGKYGSRLAKVAHGLDDRDVQ 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS--EHQYCRFISTFIKTSP 296 T++ I ++ I M QA+ + E +K Sbjct: 238 TS-RTRKSISVENTYHSDIEQLQQMDQALTRLLDELEGRFHKIEERYRPHKRFVKVKFDN 296 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + + +A S R AG+ L + Sbjct: 297 FE----QTTIEEIIPDSGEHWLNEKAYHALLHSAWQRGSRPVRLLGAGLRLEPLHKEMEM 352 Query: 357 QLNLFDD 363 QL LF Sbjct: 353 QLVLFSQ 359 >UniRef50_D1JEL0 DNA polymerase IV n=1 Tax=uncultured archaeon RepID=D1JEL0_9ARCH Length = 363 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 78/373 (20%), Positives = 144/373 (38%), Gaps = 30/373 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-----------DGCVIARNAEAKALGV 49 + D+++F++S E +P L G PV+V G V + EA+ G+ Sbjct: 7 VILHVDMDSFFSSVEEREKPKLKGLPVIVGGKITPEWEKEDSKIRGVVSTCSYEARKYGI 66 Query: 50 KMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL-T 108 K L N LY +S +M+ L + + ++E SIDEAF D+ T Sbjct: 67 HSAMALSKAYKLCPDAT--FLPVNMPLYKHVSGEIMNILRKYADKMEQVSIDEAFLDVST 124 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 V + D + + I+ + LT +GIA KT+AK+A+ K Sbjct: 125 KVEDWNDAREHAKRIKKAIQVEEGLTCSIGIAPNKTIAKIASDFVKPDGLTVV------- 177 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 E + ++ L V ++ G+G + K L MGI + LA D++ + +R Sbjct: 178 -EEAKAFLAPLDVKNIPGVGPKTDKILRMMGIDQIGQLASGDVQKLVAAIGQSGKRLHLV 236 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G ++EE ++ + R+F D + + + + A + + + Sbjct: 237 ANGIDKSEVEEKW-VRKSLSRERTFVNDTRDASVLTKCVDALAEEVYNAMTDAGFVFKTV 295 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG-HRYQKAGVML 347 S +K F + + + L T D + A + + A + + GV + Sbjct: 296 SIKVKFEDFTI------ATRAKTLKTYHCDLSTLKRTANELMTELNNAKSKKKRLIGVRI 349 Query: 348 GDFFSQGVAQLNL 360 + + Q+ Sbjct: 350 SNLGAVDEKQMRF 362 >UniRef50_B5TTR9 RumB n=6 Tax=Bacteria RepID=B5TTR9_9BACT Length = 375 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 135/377 (35%), Positives = 204/377 (54%), Gaps = 7/377 (1%) Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLT 108 MG P F+ K+L + + SSNY LYA+MS R + L E EIYSIDE F DLT Sbjct: 1 MGVPLFQLKELVEQHNITVLSSNYALYAEMSRRFIKVLAEFVTPQEQEIYSIDECFLDLT 60 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 + DLT + I + + L +GI +TKT AK+ANH AKK GV +L + Sbjct: 61 AYASNYDLTAYAHLILDRLSRWLGLPACIGIGRTKTEAKMANHIAKKN-SYLKGVCNLVS 119 Query: 169 LER--QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 ++ L ++ V +VWGIGR+ +KKL+++ I TVLD IR F+VV+ RT+ Sbjct: 120 MDYCSIEGLYQSIEVSEVWGIGRKHTKKLNSLSINTVLDFVCASPLMIRDQFSVVMHRTL 179 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 EL+G C+++E+ K++II SRSFG+++ +++AI Y A +LRSE+ C Sbjct: 180 LELQGISCIEIEQSPKAKKQIIASRSFGQKVYSCEDLKEAITLYVQDAVSRLRSENLLCG 239 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 I +F++++PF +EP+Y S S L P+ +S + AT +D ++Q ++K GV+ Sbjct: 240 CIISFVQSNPFDTSEPFYNKSLSYALPDPSDNSLLLSKIATSMVDQLYQKNIGFKKCGVI 299 Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF-AGQGIQQQWQMKRA 405 L + +LF D S +LM +D + K G+ + A + W M R Sbjct: 300 LTCLEPKATHIYDLFTDMNKIESSNKLMDSLDDIQNKFGKRKIGLGASMLPDRNWNMSRN 359 Query: 406 MLSPRYTTRSSDLLRVK 422 LSP Y + L+ VK Sbjct: 360 KLSPNYF-KWDQLMSVK 375 >UniRef50_B5JKI6 ImpB/MucB/SamB family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKI6_9BACT Length = 361 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 71/355 (20%), Positives = 134/355 (37%), Gaps = 26/355 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FYA+ E P+L G+PV V + G + N EA+A G+ P ++ Sbjct: 14 IIHIDMDCFYAAIEVRDHPELRGEPVAVGGRSSRRGVLTTCNYEARAFGIHSAMPTYQAM 73 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 ++ +E+Y + S R+ + + + +E S+DEA+ D++ + + Sbjct: 74 QRCPH--LIIKPVRFEVYKNESRRIRAIFADYTSAIEPLSLDEAYLDVSHLDRP--ASAI 129 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIR + Q T L GIA K LAK+A+ K + ++ M L Sbjct: 130 ALEIRKRIRQTTGLNASAGIAPNKMLAKIASDWRKPNGQYE------ITPDQIADFMREL 183 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G++ + +L ++ I T DL ++KHF RG + Sbjct: 184 PVSKIWGVGKKSAARLASLDIATCGDLQQKTRLELQKHFGKFGSELYELSRGIDHRDVVS 243 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS--EHQYCRFISTFIKTSPF 297 ++ + C R++ + +Q + L + + K S F Sbjct: 244 -NRIRKSMSCERTYATDLHSLDDRQQHAADIFQELSADLARFKSDRPIHKLFVKCKYSDF 302 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 S L +D++ ++ + + G+ + Sbjct: 303 T----RTSIERS-GLPFTLASFQDLLA------ESYHRRSDPIRLLGLGVRFTDP 346 >UniRef50_C5CA41 DNA polymerase IV involved in DNA repair n=3 Tax=Micrococcus luteus NCTC 2665 RepID=C5CA41_MICLC Length = 431 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 93/408 (22%), Positives = 157/408 (38%), Gaps = 29/408 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ S E +PDL G+P V + V++ + A+A GV+ P + Sbjct: 15 ILHVDMDAFFLSVELREQPDLEGRPAAVAAPSGRSVVLSASYAARAYGVRSAMPLAHARA 74 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDF 119 L +V +LY +S VM+ L +++P +E S+DEAF D+ G R Sbjct: 75 LCPP--LVVIPPRQQLYRAVSAEVMAVLADVTPVMEQLSVDEAFLDVAGARRRLGPPEHI 132 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G IR V L VG + K +AK A+ AAK + + +R + L Sbjct: 133 GHLIRERVRSALGLPCTVGGSAVKFVAKTASTAAKPDG------LLIVPPQRTLDFLHPL 186 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G + +++L G+ T+ DLA D + F RG + Sbjct: 187 PVGRLWGVGPKAAERLARRGVATIGDLARVDPARLEASFGAAGREWASLARGIDPRPVAP 246 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P + I +F D + + R A +LR+E ++ +K ++ Sbjct: 247 R-PAARSIGADHTFDVDPVDVVGVDPEVLRLCHRVAARLRAEQVTAGAVTVRLKAPDGSV 305 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDF---FSQGV 355 S + +L PT D++ A R + + + H + GV Q Sbjct: 306 R------SRTARLARPTATGHDLLGPARRLVRELHAERPHPVRLVGVRAERLGDEADQPP 359 Query: 356 AQLNLF--------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 AQ LF + + +D + + + A Sbjct: 360 AQEALFGGPAWGTEGEASEAGDWAGAEAALDAVARRFPTAAVRPASLL 407 >UniRef50_UPI0001C34BBE DNA-directed DNA polymerase n=3 Tax=Neisseria subflava NJ9703 RepID=UPI0001C34BBE Length = 344 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 151/345 (43%), Positives = 213/345 (61%), Gaps = 5/345 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N+FY SCE VFRP+L P+VVLSNNDGCV+AR+ EAKALG+KMG+P+F+ K Sbjct: 1 MFALIDGNSFYCSCERVFRPELKNVPIVVLSNNDGCVVARSTEAKALGIKMGEPYFRVKH 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + +SSNYELYAD+S R+M T+ P VE+YSIDE F D++G+ +LT+ G Sbjct: 61 LVSQGRLKAYSSNYELYADLSRRMMETIAGCVPAVEVYSIDECFADMSGI---ENLTELG 117 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER--QRKLMSA 178 +IR VLQ + VGIA TKTLAK NH AK++ GVV + + + + + Sbjct: 118 CQIRQRVLQWVGIPTCVGIAPTKTLAKFCNHLAKRYPDHFRGVVVWGDWNETIRLRALRS 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 VD++WGIGRR + KL GI+T LD + D IR+ + V +ERT RE++G C L Sbjct: 178 QGVDEIWGIGRRTADKLSEQGIRTALDFVEADTATIRRRYGVTVERTQREMQGIVCDGLH 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 A +Q ++ SRSFG RI +++ A+ + + AE LR + +S F+ T F Sbjct: 238 PNAQPRQNLVRSRSFGTRIETLEALQAAVTHHVSLGAEALRKDGLTASAVSVFLHTDFFR 297 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 +EP Y NS + L+ T D+ + A R L I+++G+ Y+K Sbjct: 298 EDEPQYHNSLAQNLIVSTADTVHLNRIAQRLLADIYRSGYLYKKM 342 >UniRef50_A9NFA5 DNA-damage repair protein n=5 Tax=Bacteria RepID=A9NFA5_ACHLI Length = 448 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 92/417 (22%), Positives = 155/417 (37%), Gaps = 24/417 (5%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 D+ +FYAS E V R D + P+VV + V+A + K+LGV F+ Sbjct: 37 ILCIDLKSFYASVECVLRGLDPFKTPLVVADKSRGGGSIVLAVSPYLKSLGVPSRCRIFE 96 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCRD 115 L ++ + Y + S V+ + + +YSIDEAF DLT Sbjct: 97 ---LPEDLNIIYAKPQMQTYLEYSASVIGVYLDFISEADLYVYSIDEAFLDLTSYLAYYK 153 Query: 116 LT--DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA-AKKWQRQTGGVVDLSNLERQ 172 T + EI T+ + LT GI ++KL+ AKK + + + + Sbjct: 154 KTDIELAEEILNTITSKLGLTATCGIGPNMIMSKLSMDIEAKKNPN---NIAKWNYDDIK 210 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 L P+ +WGIG R+ L+ +G+ T+ D+A+ +++ F V+ E G Sbjct: 211 DHLWPVTPLSKMWGIGHRMESHLNKLGLFTIGDIANYPKEKLKRRFGVLGEELWYHTHGI 270 Query: 233 PCLQLEEFA---PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 ++++ + + + I +LR + + IS Sbjct: 271 DLSEIKDKYKLRTKPKSFGSGQVLFRD-YSETEIMTIILEMVDDVTRRLRIAKKRAQTIS 329 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 I + G S V L PT I D ++ G+ + GV L Sbjct: 330 LSIGYTK----SVAGGFSRQVTLEQPTSSEATIYQTCQDLFD-MYYEGYPIRTVGVHLSK 384 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 V Q +LF+D QL MD + K G+ ++ + +R Sbjct: 385 LTDSKVYQYSLFEDAHQLEKEYQLHMTMDKIKHKFGKNSVIRLSSEQEHATAKQRNK 441 >UniRef50_C5JS23 DNA damage repair protein Mus42 n=2 Tax=Ajellomyces dermatitidis RepID=C5JS23_AJEDS Length = 1171 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 62/381 (16%), Positives = 122/381 (32%), Gaps = 39/381 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+L +PV + + + N A++ G+K G Sbjct: 372 ILHVDFDSFFAAVSIRKHPELVDQPVAIAHGTGPGSEIASCNYPARSFGIKNGMWMKAAL 431 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-- 117 + + ++ Y S + + V+ SIDEA D+TGV + Sbjct: 432 QMCP--NLKVLPYDFAAYEQASRAFYEVILSIDGIVQSVSIDEALVDITGVCLDAGGSDG 489 Query: 118 ----------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + + +R +V +RT + VGI A++A AK + Sbjct: 490 RGISEGSIWREQEKADEIAQNLRNSVKERTGCNISVGIGGNVLQARVALRKAKPAGQFQ- 548 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NV 220 + + L V D+ G+ + KL+ +G+ V D+ D + Sbjct: 549 -----LKPDAVLDFIGTLAVKDLPGVAHSLGAKLEELGVTFVKDIRDLSREKLTSSLGPK 603 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG ++ ++ + ++G R + + + S +L Sbjct: 604 TGAKLWDFARGIDNTEVG-VQAPRKSVSAEINWGIRFVNQAQAEEFVQSLCDELHRRLVE 662 Query: 281 EHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ I + + SV L T S I A L Sbjct: 663 NLVKGKQLTMRIMKRSADAPLEPVKHLGHGKCDTFNKSVNLGVATNASDIIGREAITILR 722 Query: 332 AIWQAGHRYQKAGVMLGDFFS 352 + + GV + Sbjct: 723 GFKFSPGDLRGLGVQMTKLEP 743 >UniRef50_Q2SS65 ImpB/MucB/SamB family protein n=3 Tax=Mycoplasma mycoides group RepID=Q2SS65_MYCCT Length = 408 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 78/410 (19%), Positives = 163/410 (39%), Gaps = 20/410 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ASC + P+L KP+V+ ++ + + A + EA+ +K P FK K Sbjct: 6 IIHIDMDAFFASCMQLKHPELKNKPIVISNSFDKSIISAASYEARKYNIKAAMPLFKAKK 65 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L+ + ++ ++ +++S+++ ++ + ++EI SIDEA+ D++ + D+ Sbjct: 66 LYPK--IISIRADMNFISNISSQIWEFIKTNYTNKIEIASIDEAYLDVSDLILNIDVLQL 123 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + I+ + +LT +GI + AK++ K + L+ + + + + Sbjct: 124 AKNIQKDIYNHFNLTCSLGIGFNRFSAKMSTSLNKPNG------ITLTTITNFKHNIWPI 177 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P++ ++G+G K L+ IKT+ DLA I + N E G + Sbjct: 178 PINKMYGVGESSIKILNHTKIKTIKDLALLSDAQIYELLNKKGLVLKNEALGLGSDYINY 237 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT----S 295 + + I + I Y + I + + KL C+ I I+ Sbjct: 238 LSSEYKSISKETTLNTPIYQYDEIETIILNLSKFITNKLVKNQLLCKTIEIKIRYKIDEK 297 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + + L T D I N+A +++ GV + + Sbjct: 298 IFDKQKHLTSKHKQITLKNHTNDLEKIYNSAIDCFYNLYEQNKGILLIGVGVSKLIHKNQ 357 Query: 356 AQLNLFDDNAPRPGSEQLMTVMD------TLNAKEGRGTLYFAGQGIQQQ 399 + L +N +Q+ + +N K + ++ A + Sbjct: 358 NWVQLDINNQINIDKKQIDNALKIENMIFNINKKFKKPVIWKAKDLKKSS 407 >UniRef50_A0YE03 DNA polymerase IV n=2 Tax=Gammaproteobacteria RepID=A0YE03_9GAMM Length = 388 Score = 263 bits (673), Expect = 6e-69, Method: Composition-based stats. Identities = 82/373 (21%), Positives = 145/373 (38%), Gaps = 26/373 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 CD + F+ + E P L+G+PV V + G + N EA+A GV + Sbjct: 31 IIHCDADCFFVAVEMRDDPSLFGRPVAVGGSADRRGVISTCNYEARAYGVGSAMATATAR 90 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L ++ S N E Y ++++ + E S VE S+DEA+ D+TG C T Sbjct: 91 RLCPD--LIVLSGNMEKYKLAASQMRTIFCEYSTLVEPLSLDEAYIDVTGSDACHGSATL 148 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EIR V + +T+ G+A K LAK+ + K + + R + A Sbjct: 149 IAEEIRQRVKESVGITLSAGVAPNKFLAKIGSDWNKPNG------LCVIPPARVDAFVQA 202 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 +PVD ++G+G+ +++L MGI+T DL I + + F R RG ++ Sbjct: 203 MPVDRLFGVGKVTAERLHRMGIQTCGDLRAFSIFQLSERFGSFGSRLYDLSRGIDDRAVK 262 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH-------QYCRFISTF 291 ++ + +F ++ S + + + +L++ + Sbjct: 263 T-GRIRKSLSVEHTFPSDLSAIDSCLEQLPDLFDQLTTRLQTLNDQSKGAAYRVNKQFIK 321 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 IK + F + + ++ S+ R GV D Sbjct: 322 IKFNNFQSTTMECIVAGAPRI-------AIFRELCRESILRGDGLAVRLMGLGVRFQDPA 374 Query: 352 SQGVAQLNLFDDN 364 G QL+LF++ Sbjct: 375 CDGAVQLSLFENA 387 >UniRef50_Q2L7B2 REV1 n=7 Tax=Sordariomycetes RepID=Q2L7B2_NEUCR Length = 1343 Score = 263 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 80/446 (17%), Positives = 147/446 (32%), Gaps = 49/446 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+ KP VV N + + N A+ GVK G Sbjct: 368 IMHVDFDSFFCAVSLKKAPEYRDKPAVVAHGNGKGSEIASCNYPARKFGVKNGMWMKHAL 427 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG---------- 109 +L + ++ Y + S + + + V+ SIDEA D+T Sbjct: 428 ELCPD--LKILPYDFPGYEEASRQFYDAILGIGGVVQSVSIDEALIDVTDIVMAEAGSSG 485 Query: 110 --------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + ++R + ++T V VGI LAK+A AK + Sbjct: 486 IGISEGSIWREQEKVDQMASKLRDRIKEQTDCHVSVGIGANILLAKVALRKAKPAGQYQ- 544 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NV 220 E L+ L V+D+ G+ I KL+ +GIK V D+ T + Sbjct: 545 -----IKPEEALDLLGELNVEDLPGVAHSIGAKLEELGIKFVKDIRQTSKERLISALGPK 599 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 E+ RG ++ E P ++ + ++G R + + + S + +L S Sbjct: 600 TGEKLWEYSRGIDRTEVGEQ-PIRKSVSAEVNWGIRFVNQEEAEEFVRSLSQELERRLLS 658 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 E + ++ I + + SV T I A L Sbjct: 659 EGVKGKHLTMKIMRRAADAPLDPPKHLGHGKCDTFNKSVSFGVGTNSGEVIGKEAVAILR 718 Query: 332 AIWQAGHRYQKAGVMLGDFFS-------QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKE 384 + + + G+ + QG + F A ++ +D Sbjct: 719 SYKFSPGDLRGLGIQMTKLEPLKPSAAQQGSQKKLSFGAAATSSAKKRKAEAIDDEPQ-- 776 Query: 385 GRGTLYFAGQGIQQQWQMKRAMLSPR 410 + + ++ + L+PR Sbjct: 777 -SPAAHRSSTERDEKDPITADPLTPR 801 >UniRef50_B6J224 DNA polymerase IV n=5 Tax=Coxiella burnetii RepID=B6J224_COXB2 Length = 372 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 136/365 (37%), Gaps = 24/365 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FY + E P L KPV V ++ G + N A+ GV+ K Sbjct: 27 IIHVDMDCFYVAIEMRDNPKLREKPVAVGGAAHSRGVICTANYIARGYGVQSAISSSYAK 86 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTD 118 L ++ N E Y + +++ +E + VE S+DEA+ D++ + + T Sbjct: 87 KLCP--SLIILPVNMEKYRAIGHQIRGLFQEYTHLVEPLSLDEAYLDVSDCKIHQGSATR 144 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +EIR +++R LT G+A K LAK+A+ K + + + + Sbjct: 145 IAQEIREQIVKRHSLTASAGVASNKLLAKVASAWNKPNGIK------VILPSKADDFVKT 198 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++ + G+G+ ++K+ AM I T DL + K F RG +E Sbjct: 199 LPIEKIHGVGKITAQKMKAMNIHTCSDLQALSREALSKSFGSFGVTLYELCRGIDPRSVE 258 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE-HQYCRFISTFIKTSPF 297 ++ + +F + I + + ++L + R IK + F Sbjct: 259 P-NRIRKSVSVEHTFSQDIATLSECEIELANLFNDLKQRLLKHTDRCIRKQFVKIKFNDF 317 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + + + ++ L D+ + + GV + + Sbjct: 318 KITKAE-TITQTISL--------DLFKHLL--YQIFERQQKPVRLLGVGVSFSEDPLLEL 366 Query: 358 LNLFD 362 F+ Sbjct: 367 QRTFE 371 >UniRef50_UPI00016E76F4 UPI00016E76F4 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E76F4 Length = 1200 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 77/439 (17%), Positives = 143/439 (32%), Gaps = 76/439 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---------------------NDGCVIA- 39 D++ F+ S RPDL GKPV V SN Sbjct: 408 IFHVDMDCFFVSVAIRNRPDLKGKPVAVTSNRGAGKVLHRPGANPQLERHYYQWKQSHTK 467 Query: 40 -------------------------------RNAEAKALGVKMGDPWFKQKDLFRRCGVV 68 + EA+ GV+ G + K K L + Sbjct: 468 SGETPSQESPESNTSGAGQETAALSMAEIASCSYEARQAGVRNGMFFGKAKQLCP--SLQ 525 Query: 69 CFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLTDFGREIRAT 126 ++E Y +++ + TL + +E S DE D + + C + + IRA Sbjct: 526 AVPYDFEAYKEVALTMYETLAGYTHDIEALSCDELLIDSSALLAELCISPEELAKAIRAD 585 Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 + ++T VG+ LA+LA AK + E + LPV + G Sbjct: 586 IKEKTGCCASVGMGSNILLARLATRKAKPDGQHF------LRSEDVDDFIRDLPVTSLPG 639 Query: 187 IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQ 245 +G +S+KL AMG+++ DL + ++K F + R RG + + ++ Sbjct: 640 VGPVMSRKLVAMGVRSCGDLQQVSLSQLQKKFGPRTGQTLFRFCRGLDDRPVR-YEKERK 698 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSP 296 + ++ R T + + + ++L+ R ++ + + Sbjct: 699 SVSADMNYNIRFTTVNEAECFLTNLSMEVQKRLQEAGLRGRRVTLKVMVRKVGAPQEPAK 758 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + + + +V L T I +A + A+ + G+ + G A Sbjct: 759 YGGHGICDNLARTVMLAQSTDHGEVIASAVIKLFHAMNLQVQDLRGVGIQVQLL--DGNA 816 Query: 357 QLNLFDDNAPRPGSEQLMT 375 + L Sbjct: 817 HQDSVGPRKRSIKEMLLDQ 835 >UniRef50_A2QTI4 Contig An09c0050, complete genome n=9 Tax=Eurotiomycetidae RepID=A2QTI4_ASPNC Length = 1165 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 72/408 (17%), Positives = 137/408 (33%), Gaps = 39/408 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D + F+A+ T+ RP+L GKPV V + + + N EA+A G+K G Sbjct: 374 IMHVDFDCFFAAVSTLKRPELQGKPVAVAHGTGSGSEIASCNYEARAHGIKNGMWMKGAL 433 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-- 117 + ++ Y + S + S + + V+ SIDEA D+T + Sbjct: 434 QTCPE--LKVVPYDFPAYEEASRKFYSAILSVDGIVQSVSIDEALVDITTQCLEAGGSDG 491 Query: 118 ----------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + E+RATV + T V VGI LAK+A AK + Sbjct: 492 RGISEGSLYREQARADEIADELRATVKKETGCAVSVGIGGNILLAKVALRKAKPAGQFQ- 550 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NV 220 + + L V D+ G+G + KL+ +G+K V D+ D + Sbjct: 551 -----LKPDAVLDFIGNLTVQDLPGVGYSLGTKLEDLGVKLVKDVRDLTRDRLTTSLGPK 605 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG ++ ++ + ++G R + + S +L Sbjct: 606 TGVKIWEYARGIDRTEVGNEVL-RKSVSAEVNWGIRFVNQTQAEDFVRSLCQELHRRLVE 664 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ + + + SV L T + + A L Sbjct: 665 NLVKGQQLTLKVMRRALDAPLEPVKHLGHGKCDVFNKSVVLGVATDAADILGKEAVAMLR 724 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 ++ + + GV + + + + + ++ Sbjct: 725 SMNLSPGDLRGLGVQMTKLQHLQTSSPSKSGQRQLNFKASPVRKSIER 772 >UniRef50_C0ZB00 DNA polymerase IV n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZB00_BREBN Length = 350 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 67/304 (22%), Positives = 121/304 (39%), Gaps = 13/304 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + RP+L GKPV+V N G V + EA+ GV+ P + Sbjct: 4 ILHLDIDAFFASVEQLDRPELRGKPVIVGGTGNRGVVSTCSYEARKYGVRSAMPVAMARK 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + Y Y + S V + R + +DEA+ D++ + + Sbjct: 64 KCPQG--YYLPVRYSRYIEKSAEVRQIFTSYTERYQTVGLDEAYLDVS---HYENAVPIA 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R+I+ + + T LT +G++ +LAK+A+ K + E+ ++ LP Sbjct: 119 RDIKRRIKRETGLTCSIGLSYNMSLAKIASDLKKPDA------FVIIRPEQALDVLRPLP 172 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + + G+G++ + L GI+TV D + F RGE ++ E Sbjct: 173 IGTLHGVGKKSQELLAKKGIETVEDFWRLSLDEATTLFGKFGRSLYYRARGEDNREI-EM 231 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + + D ++ S E +R E + I+ IK + F Sbjct: 232 DRAPKSSSRETTLPFDLFDRDAIAPIATSLLREVEEDIREEGVEPQTITLKIKYADFTQR 291 Query: 301 EPYY 304 + Sbjct: 292 TKQH 295 >UniRef50_Q98JM5 DNA polymerase IV 2 n=4 Tax=Bacteria RepID=DPO42_RHILO Length = 415 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 90/412 (21%), Positives = 168/412 (40%), Gaps = 32/412 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E + P L GKP+ V V+A + EA+A GV+ G P K ++L Sbjct: 7 ILHADLDAFYASVEQLLDPSLRGKPIAVGGG---VVLAASYEARAFGVRGGMPGRKAREL 63 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFG 120 + ++ N+ Y + + + L++ +P VE SIDEAF D+ G + D Sbjct: 64 CPQ--LIFVGGNFSHYQRLGDAAIKVLDDFTPVVERISIDEAFADVAGCTHLFGQPRDIA 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR V L + +G+A+TK LAK+A+ AK + + + + + LP Sbjct: 122 TAIRHRVRAELGLPISIGVARTKHLAKIASQVAKPDG------LVVVDPGTELDFLHDLP 175 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEE 239 V +WG+G +L +GI+T+ +LA T + + E+ +LE Sbjct: 176 VSLMWGVGPATKSRLAEIGIQTIGELARTHSGALTRLLGPAAGEKLAALAWNRDPRKLET 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + G++ + + A R A +LR++ + R ++ ++ + + Sbjct: 236 RRRA-HSAGAQSALGQKPAVARVIVPTLLHLADRVASRLRAKARPGRTVTVRVRFADLSA 294 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFSQGVA 356 + S+ L P + + A + + + + Sbjct: 295 ------VTRSITLDQPISATTMLAEIAGDLVRGVLADHPREKTISLLAISVSHLEESAEL 348 Query: 357 QLNL---FDDNAPRPGSEQ------LMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 QL+L D RPGS++ +D + + G+ + + ++ Sbjct: 349 QLDLPLGLADEKRRPGSKKGLARFGADRAIDKIRERFGKQAVGYGTVALEAA 400 >UniRef50_B1MZW7 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=3 Tax=Leuconostoc RepID=B1MZW7_LEUCK Length = 361 Score = 261 bits (666), Expect = 5e-68, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 138/365 (37%), Gaps = 21/365 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYA E P+L +P+++ + G V N A+ALGV Sbjct: 13 ILHVDIDAFYAQVEMRDNPELRNRPLIISRDPAETGGRGVVATANYVARALGVHSAMSAV 72 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + + L V S N++ Y +S + + ++E ++DEA+ D+T Sbjct: 73 EARQLAPEG--VFLSPNFKKYRQVSKTIHHIFHTFTEKIEPVALDEAYLDMTDSHL--SG 128 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +IR +L+ T LT +GI+ K LAKL + K V + + + Sbjct: 129 ASIAAQIRHQILKETGLTSSIGISHNKLLAKLGSEFNKPNG------VTVITHDNMLSFL 182 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 + LP+ D G+G + K A+ ++ L L +R F + E + RG + Sbjct: 183 AELPIGDFRGVGAKTKAKFSALKVENGLQLRQLPKETLRGLFGKMGENLYWQTRGVHFGE 242 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 ++ +Q + +F I + + +A A L+ + R ++ I+ Sbjct: 243 VQWQ-RQQQSVGKEATFRYFIHNEIDVHKAFKQLANEMIAALKVKQLTGRTLNIKIRDDA 301 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F L I A + + Q + G+ + + S Sbjct: 302 FNTITRAITRETPWPL-----SETLITQTAQSVFEEVIQTPFSVRLLGLSISNLQSSTFE 356 Query: 357 QLNLF 361 ++ LF Sbjct: 357 EMTLF 361 >UniRef50_B0TZS5 DNA polymerase IV n=14 Tax=Francisella RepID=DPO4_FRAP2 Length = 350 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 69/363 (19%), Positives = 132/363 (36%), Gaps = 25/363 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+A E P L KP V N G + N A+ GV+ P Sbjct: 7 IIHIDMDYFFAQVEEKANPSLKDKPFAVGGTNPKRGVISTCNYIAREYGVRSAMPTAIAM 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 ++ ++++ Y S + + +VE S+DEA+ D+T V+ T Sbjct: 67 QKCP--NLILLNTDFAKYKATSAVIRDIFYSFTDKVEPLSLDEAYLDVTDVKEYKNSATL 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I+ + +T LT G+A K LAK+A+ K + E+ + Sbjct: 125 IAQAIKQEIFNKTGLTGSAGVAPNKLLAKIASDINKPNGLY------VITPEQVDSFVKD 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV ++G+G+ +KL M ++T LDL + + F RG ++ Sbjct: 179 LPVKKLFGVGKVSQEKLKNMNVETCLDLQQLSLATLVDKFGKFGSSLYNYARGIDNREVN 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY-CRFISTFIKTSPF 297 ++ + ++ E + + + + + + ++ EH I + F Sbjct: 239 PV-RIRKSVSVENTYLEDLKTLEACLEKLPNLYNKLTSRMTEEHYKSIIGIVVKFTDTKF 297 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 S+ + T D + + N + + G+ + Q Sbjct: 298 NKT--------SLTRVAKTLDKKVLKNLIIELHQK---QNYHIRLIGIGI-KLGEIDDRQ 345 Query: 358 LNL 360 L+L Sbjct: 346 LSL 348 >UniRef50_Q03X78 Nucleotidyltransferase/DNA polymerase for DNA repair n=19 Tax=Lactobacillales RepID=Q03X78_LEUMM Length = 440 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 101/418 (24%), Positives = 159/418 (38%), Gaps = 17/418 (4%) Query: 1 MFALCDVNAFYASCETVFRPD--LWGKPVVVLSN---NDGCVIARNAEAKA-LGVKMGDP 54 +F L D +FYAS E V R L G VV+ N G V+A + AK LG+ Sbjct: 18 VFFLIDSKSFYASVENVERGFNPLKGDLVVMSEQANTNGGLVLAASPTAKKDLGISNVMR 77 Query: 55 WFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV--EIYSIDEAFCDLTGVRN 112 +DL G+ Y + ++ + + + + YSIDE+ D+T Sbjct: 78 Q---RDLPDVHGLFIAHPRMNNYIAENLKINNIYRQYTDDINLLPYSIDESILDVTHSWR 134 Query: 113 CRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + +I+ V T + + VGI T LAK+A K R GV + Sbjct: 135 LFGKTPEEVAFKIQKQVRAETGVYLTVGIGDTPVLAKIALDIEAKHTRNLMGV--WHYED 192 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 KL +DDVW IG R + KL+ MGI ++ DLA D R +V E+ Sbjct: 193 VPTKLWPITKLDDVWSIGSRTAHKLEVMGIHSMYDLAHQDPYQYRAKMGLVGEQLFALSW 252 Query: 231 GEPCLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G + E P + S+ + + A + A ++RS + +S Sbjct: 253 GIDRTDMAEVVVPKSKSYSNSQVLPRDYKRKEEIEIVVREMADQVATRIRSHKKQTCLVS 312 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 FI S + + PT D+R ++ + W G + G+ G Sbjct: 313 LFIGYSFAESERQGSHGFRKQQRIDPTNDTRKLMAIMVALFERHWH-GEVIRNIGIDYGG 371 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QL+LF+ ++ V+D + + G L A + + RA L Sbjct: 372 LIEDTGVQLDLFEQPEKSIKFNKIDQVVDEIRKRFGTTALMRAMSKEKGGTAINRASL 429 >UniRef50_B2VS10 DNA polymerase IV n=3 Tax=Pleosporineae RepID=B2VS10_PYRTR Length = 878 Score = 260 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 69/380 (18%), Positives = 125/380 (32%), Gaps = 39/380 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+ KP VV + + N A+ GVK G + + Sbjct: 390 ILHVDFDSFFAAVSLKKHPEYKDKPAVVAHGQGSGSEIASCNYPARTYGVKNGMWMKRAQ 449 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG---------- 109 +L + ++ Y + S + V+ SIDEA D++ Sbjct: 450 ELCPD--LKILPYDFPAYEETSRAFYDVILSTGGLVQSVSIDEALVDVSNLCISVGGSDG 507 Query: 110 --------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + +R V RT V VGI LAK+ AK + Sbjct: 508 KAHSEGSVYREQAKANEIALNLRDEVRSRTGCNVSVGIGGNILLAKVGLRRAKPAGQYQ- 566 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NV 220 E + L V D+ G+ I KL+ +GIK V D+ + + + Sbjct: 567 -----IKPEEALDFIGQLQVQDLPGVAWSIGGKLEGLGIKLVKDIRELTKEKLIQTLGPK 621 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 E+ RG ++ E ++ + ++G R + + I S ++LR Sbjct: 622 TGEKLYEYSRGIDRQEVGEQV-VRKSVSAEVNWGVRFENQEQADEFIASLCGELQKRLRK 680 Query: 281 EHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 E + + + S + ++ S+ L T S + A + Sbjct: 681 EKVKGKQFTMKVMRRSPDAPLDPSKHLGHGKCDTHNKSILLGVATNSSEVLTKEALAIVR 740 Query: 332 AIWQAGHRYQKAGVMLGDFF 351 + G+ + Sbjct: 741 GFAFTPGELRGIGIQMTKLE 760 >UniRef50_Q8TIW3 DNA polymerase IV n=4 Tax=Methanosarcinaceae RepID=DPO4_METAC Length = 366 Score = 260 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 92/377 (24%), Positives = 150/377 (39%), Gaps = 31/377 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC-----VIARNAEAKALGVKMGDPW 55 + D++ FYA+ E +P+L GK VVV + V N A+ G++ G P Sbjct: 5 VIIHVDMDYFYAAIEEREKPELLGKAVVVCMLSGRSELSGSVSTCNYIAREFGIRSGMPC 64 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR------VEIYSIDEAFCDLT- 108 + K L V E Y +S+R+M L + E S+DEAF ++T Sbjct: 65 SRAKKLNPEA--VFLPVRKEFYTSVSDRIMEILRSYADPGENGDSFEQISVDEAFLEITY 122 Query: 109 -GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + + G +I+ + ++ +LT +GI K +AK+A+ A K + + Sbjct: 123 RAGGDFNLAFELGMQIKKEIKEKENLTCSIGIGPNKLIAKMASSAKKPDG------ITVV 176 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTV 226 + E Q + L V +WGIG +KKL M I TV DLA+ D+ + F Sbjct: 177 SPENQEAFLWPLKVSKLWGIGDVTAKKLQEMDIVTVKDLAEHDVIELISTFGKSRGTWLK 236 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 + G L+E ++I + E D + + A EKL S R Sbjct: 237 QAASGIDDSPLKER-EGSEQIGRIATLPEDTLDQELILSLLEKLAGDVIEKLDSRELSFR 295 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGV 345 ++ + S F + S L P ++ AA L +++ GV Sbjct: 296 VVTVTVINSNFR------TYTKSRTLNHPVSSKETLLEAAREILSEFLSESKTEFRRVGV 349 Query: 346 MLGDFFSQGVAQLNLFD 362 +G + +LFD Sbjct: 350 RVGGLQKKKGQT-SLFD 365 >UniRef50_B1YIX5 DNA-directed DNA polymerase n=2 Tax=Exiguobacterium RepID=B1YIX5_EXIS2 Length = 441 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 103/422 (24%), Positives = 171/422 (40%), Gaps = 28/422 (6%) Query: 2 FALCDVNAFYASCETVFR--PDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFK 57 D +FYASCE +R P L K VV ++A + K LG+K ++ Sbjct: 12 IFCVDSVSFYASCECRYRNLPPLTTKLAVVSDLTRSGSVILAASPALKQLGIKTASRLYQ 71 Query: 58 QKDLF--RRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLTGVRNC 113 + L R +V Y S V+ L + +P + IYSIDE F D++G Sbjct: 72 IEQLPYRERKQIVLVEPRMLAYMKTSIEVLDVLHQFAPPDAIRIYSIDENFVDMSGTERL 131 Query: 114 RDL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH-AAKKWQRQTGGVVDLSNLER 171 T+ +I+ + Q+T + V +GI +AKL K+ G D+S Sbjct: 132 FGSDTETAWKIQTAIWQQTGIPVRIGIGPNNVIAKLVLDLRGKREGIAQCGYADVS---- 187 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 +L+ PV +WG+GR + + L MGI T+ DLA + + + F V+ G Sbjct: 188 --RLLHDFPVRKMWGVGRMMEQHLSVMGIHTIGDLAAAPVEDLHERFGVIGAELWHHAWG 245 Query: 232 EPCLQ--------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 TK+ I + Y +R + A+ A ++R +Q Sbjct: 246 IDGSPTIIDPMTLFRTAPDTKRTIGHGVTLMRDYYQYEQIRLVLAELASDVAARVRFSNQ 305 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 + ++ S + G S ++L PT D R ++ + + W G + Sbjct: 306 VGWTVHLGVRYSR---HVARDGFSKQLRLPYPTADERLLLRHILQLFEPNWLDGEPVRFL 362 Query: 344 GVMLGDFFSQGVA-QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 V LG QL+LF+DN ++L+ +D +N + G+GT+ A + Sbjct: 363 SVALGQLTPDQGTLQLSLFEDNTKVWRRKRLLKAIDHVNLRYGKGTIRLAVSFLDTSVAK 422 Query: 403 KR 404 +R Sbjct: 423 RR 424 >UniRef50_C8V695 Deoxycytidyl transferase (Eurofung) n=2 Tax=Emericella nidulans RepID=C8V695_EMENI Length = 1139 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 66/381 (17%), Positives = 127/381 (33%), Gaps = 39/381 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQK 59 D + F+A+ T+ P+L GKPV + + + N A+A GVK G Sbjct: 342 IMHVDFDCFFAAVSTLKHPELEGKPVAIAHGTGTGSEIASCNYVARASGVKNGMWMKGAL 401 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-- 117 + ++ Y + S + + + V+ SIDEA D+T + + Sbjct: 402 QACPD--LRVLPYDFPAYEEASRKFYRAILGIDGLVQSVSIDEALVDITTICLEAGGSEG 459 Query: 118 ----------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + ++RA + + T V VGI AK+A AK + Sbjct: 460 KGVSEGSIYREQAKADEVAEQLRAAIKRETGCAVSVGIGGNILQAKVALRKAKPAGQFQ- 518 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NV 220 + + LPV ++ G+G +S KL+ +G+K V D+ D + Sbjct: 519 -----LKPDAVLDFIGELPVQNLPGVGYSLSAKLEDLGVKIVKDIRDLSREKLSSSLGPK 573 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG ++ ++ + ++G R + S +L Sbjct: 574 TGAKLADYARGIDRTEVGNEVT-RKSVSAEVNWGIRFVTQDQAEDFMRSLCEELHRRLVE 632 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ + + + SV L T + + A L Sbjct: 633 NLMKGQQLTLKVMRRALDAPLEAVKHLGHGKCDVFNKSVILGIATNAADVLGKEAIAMLR 692 Query: 332 AIWQAGHRYQKAGVMLGDFFS 352 ++ + + GV + Sbjct: 693 SLAISPGDLRGLGVQMTKLEP 713 >UniRef50_C0S277 DNA polymerase IV n=5 Tax=Onygenales RepID=C0S277_PARBP Length = 1161 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 59/381 (15%), Positives = 123/381 (32%), Gaps = 39/381 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+L +PV + + + N A++ G+K G Sbjct: 368 IMHVDFDSFFAAVSIRKHPELADQPVAIAHGTGPGSEIASCNYPARSFGIKNGMWMKGAL 427 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-- 117 + + ++ Y + S + + V+ SIDEA D+T + + Sbjct: 428 QMCP--NLKVLPYDFAAYEEASRNFYEVILAIDGIVQSVSIDEALVDITNICLDAGGSDG 485 Query: 118 ----------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + +++R +V ++T + VGI A++A AK + Sbjct: 486 IGISEGSIYREQAKADEIAQKLRDSVKEQTGCNISVGIGGNVLQARVALRKAKPAGQFQ- 544 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NV 220 + + + L V D+ G+ + KL+ +G+ V D+ + + Sbjct: 545 -----LKPDAVQDFIGELTVKDLPGVAHSLGGKLEELGVVFVKDIRELSKEKLTSSLGPK 599 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG ++ ++ + S+G R + + S +L Sbjct: 600 TGAKLWNYARGIDNTEVG-IQVPRKSVSAEISWGIRFVSQTQAEEFVQSLCDELHRRLVE 658 Query: 281 EHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ I + + SV L T S I A L Sbjct: 659 NLVKGKQLTMRIMKRSADAPLEPVKHLGHGKCDTFNKSVALGVATNASDIIGREAISILR 718 Query: 332 AIWQAGHRYQKAGVMLGDFFS 352 + + GV + Sbjct: 719 GFKFSPGDLRGLGVQMTKLEP 739 >UniRef50_Q9UBZ9 DNA repair protein REV1 n=27 Tax=Tetrapoda RepID=REV1_HUMAN Length = 1251 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 69/419 (16%), Positives = 134/419 (31%), Gaps = 75/419 (17%) Query: 2 FALCDVNAFYASCETVFRPDL------------------------------------WGK 25 D++ F+ S RPDL GK Sbjct: 419 IMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTGRAPLRPGANPQLEWQYYQNKILKGK 478 Query: 26 PVVVLSNN------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 + ++ + + + EA+ LG+K G + K L + Sbjct: 479 AADIPDSSLWENPDSAQANGIDSVLSRAEIASCSYEARQLGIKNGMFFGHAKQLCP--NL 536 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRA 125 ++ Y +++ + TL + +E S DEA D+T + +F +R Sbjct: 537 QAVPYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAETKLTPDEFANAVRM 596 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + +T VGI LA++A AK + E + V ++ Sbjct: 597 EIKDQTKCAASVGIGSNILLARMATRKAKPDGQYH------LKPEEVDDFIRGQLVTNLP 650 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTK 244 G+G + KL ++GIKT DL + ++K F + R RG + + Sbjct: 651 GVGHSMESKLASLGIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRTEK-ER 709 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TS 295 + + ++G R T + S + +L + + ++ I T+ Sbjct: 710 KSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEATGMKGKRLTLKIMVRKPGAPVETA 769 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 F + + +V L T +++ I A + + G+ + Sbjct: 770 KFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMFHTMKLNISDMRGVGIHVNQLVPTN 828 >UniRef50_C7MBE5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MBE5_BRAFD Length = 422 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 85/408 (20%), Positives = 151/408 (37%), Gaps = 24/408 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKP-VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E P L G P VV + G V A + A+ G++ P + Sbjct: 16 ILHLDMDAFFASIEVRDDPGLEGLPVVVGGAGARGVVAAASYPARTRGIRSAMPMASARR 75 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L +V + Y +S +VM L ++ E S+DEAF D+ G R Sbjct: 76 LAPD--LVIVPPRIDHYRQVSAQVMQLLGDVVAETEQISVDEAFLDVRGARRLFGPPEQI 133 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + +R + + L VG + ++ +AK+A+ AK + ER + ++ L Sbjct: 134 AQLLRRRIREELGLPSSVGGSVSRAVAKIASAQAKPDGM------LIVPAERTAEFLAPL 187 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V + G+G + + L +G++T+ L + + + G L Sbjct: 188 SVAVISGVGPKAQEALARIGVRTIGQLREIPRSTLARALGPRAPEIAALADGSDRTGLGH 247 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 A + + R++ E +TD +R+ I + A A +LR R + ++ Sbjct: 248 RAR-DRSLGTERTWDEDLTDPDEVRRRITTMADDVARQLRRSGFVARTVVLKLRAPDGT- 305 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S + PT + + + A R + AGV + A Sbjct: 306 -----TLTRSSTMDQPTASGERLRSQVIPLWERERPAMPRLRLAGVRVSHLEPGEGA--- 357 Query: 360 LFDDNAPRPG---SEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 F + + L T MD + G +L Q +R Sbjct: 358 -FMQSELTARSAGWQDLETAMDRALERFGSASLGRGSTLSSATDQARR 404 >UniRef50_B1VHB3 DNA polymerase IV n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VHB3_CORU7 Length = 477 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 93/366 (25%), Positives = 150/366 (40%), Gaps = 20/366 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D++AFYAS E + RP L +PV+V + G V + EA+A G + P + Sbjct: 4 VAHIDMDAFYASVEQLTRPTLRDRPVLVGGMSGRGVVAGASYEARAYGARSAMPMHQAIR 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L R +V LY +S R+ + E + VE S+DE F + G+ + + Sbjct: 64 LCRNRAIVI-QPRSVLYKMISRRIFQVIAEHAGVVEQLSVDEGFAEPQGLVDAAAARRWA 122 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +++ V + T L +G+A TK AK+A+ AK E + P Sbjct: 123 EDLQRAVEEATELPCSIGMASTKLDAKMASDLAKPHGIFVV--------EDRMATFGPRP 174 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V D+WGIGR KL +G+ T+ D D ++ V G+ + Sbjct: 175 VGDLWGIGRVAQAKLADIGVHTIQQFVDMDPTDVKSLLGKVGLEVQVMAGGDDPRPVAPR 234 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++I ++ Y + + A +A +LR + + R I+ I+TS FAL+ Sbjct: 235 -AEAKQISAEQTLPVDARTYRDVLNIMELSARQAYRRLRKDGRAARTITVKIRTSDFALH 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S L PT D ++ AA L +G + GV Q L Sbjct: 294 ------TRSTTLPAPTDDFEQLLRAARAVLPRPEDSG-AVRLVGVGFSGLS--HDRQEML 344 Query: 361 FDDNAP 366 F + + Sbjct: 345 FPELSH 350 >UniRef50_A6UXE7 Ultraviolet light resistance protein B n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6UXE7_PSEA7 Length = 360 Score = 258 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 165/358 (46%), Positives = 221/358 (61%), Gaps = 5/358 (1%) Query: 64 RCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREI 123 G V + D+S RV+ L EL+PR+E+YSIDE+F DL G+ L +GR I Sbjct: 7 EHGPVLIDFLLHINGDVSARVVRVLRELAPRLEVYSIDESFLDLAGLGRP--LAGYGRHI 64 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 RA V + T + VGVGI+ TKTLAKLAN AAK+ GVV + E+Q L+ P+ + Sbjct: 65 RAEVQRLTGMPVGVGISTTKTLAKLANWAAKRR--SQSGVVVATRPEQQAALLKDAPLGE 122 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 VWG+GR++ L A+G+KT DLA D +RK F+VVLE+T+RELRGE C L+E Sbjct: 123 VWGVGRKLQAHLGALGVKTAWDLAQQDAWTMRKQFSVVLEKTIRELRGEACFALDEGPEP 182 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 KQ I CSRSF R+T+ +R+A+ SYA RAAEKLR++ C+ + +I+T F +EP Sbjct: 183 KQMITCSRSFSRRVTELAPLREAVASYACRAAEKLRAQGDVCQLLQVYIRTGVFNPDEPR 242 Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD 363 Y +ASV L TP+ DSRD++ AA L+ I++ G+RYQKAGVML + S G Q +LF Sbjct: 243 YARTASVPLHTPSNDSRDLVQAALAGLEGIYRPGYRYQKAGVMLMNLASPGQVQADLFAP 302 Query: 364 NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 RP S LM +D +N GRGT+ A W MK+ + SP YT R +L RV Sbjct: 303 AP-RPRSAALMATVDRINTNMGRGTVRLARVPALGGWSMKQELRSPGYTCRWDELPRV 359 >UniRef50_Q1N612 DNA polymerase IV n=1 Tax=Bermanella marisrubri RepID=Q1N612_9GAMM Length = 366 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 77/368 (20%), Positives = 138/368 (37%), Gaps = 29/368 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D + F+A+ E P P+ + + G + N A+A GV+ P + Sbjct: 5 VLHVDCDCFFAAVEMRDSPQYRDIPLAIGGSSDRRGVISTCNYVARAYGVRSAMPSGQAL 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L ++ + E Y +S VMS +E E SIDEA+ +++ Sbjct: 65 KLCPDLMLI--RGDMEKYRRVSREVMSIVESYGLAFEQVSIDEAYIEISPHSP---GKII 119 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++IR V +TV VGIA K LAK+A+ K + + + + + L Sbjct: 120 AQQIRQQVEAEIGITVSVGIAPNKYLAKVASDWNKPNGQF------VVEPQALNEFVRTL 173 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + G+G + ++KL MGI + D+ ++ + K F ++ RG L Sbjct: 174 PVGKIPGVGPKSAEKLANMGIHSCADVQAIELADLLKRFGQFGKKLYDRSRGIDDRTLS- 232 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR--FISTFIKTSPF 297 ++ + R+F I ++Q R ++ + R +K + F Sbjct: 233 NGRERKSLSVERTFANDIESEEELQQVAQDLWLRFQSRIEANAIRLRDVTPFVKVKFADF 292 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + +V L ++I A R + + G+ Q + Q Sbjct: 293 QVTTLANHQ-KTVDL----DSFIELIQQARRRQE------KSIRLIGIGAR--LKQNLTQ 339 Query: 358 LNLFDDNA 365 + LFD Sbjct: 340 MELFDQAT 347 >UniRef50_D2R9L6 ImpB/MucB/SamB family protein n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2R9L6_GARVA Length = 409 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 80/423 (18%), Positives = 156/423 (36%), Gaps = 52/423 (12%) Query: 7 VNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCG 66 ++AFYAS E P+L GKP+++ + N V A + EA+A GV P K ++L + Sbjct: 1 MDAFYASLEVARHPELKGKPLIIGTGNRAVVSAASYEARAYGVNSAMPVVKARNLCPQG- 59 Query: 67 VVCFSSNYELYADMSNRVMS-TLEELSPRVEIYSIDEAFCDL-TGVRNCRDLTDFGREIR 124 + + Y+ +S + ++ +VE S+DE + ++ + + + + G +R Sbjct: 60 -IFLPVDIPYYSSVSKSIFENIFLHITNQVEKVSVDECYMNVKSALLQWKSPVNIGTWVR 118 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 V ++ H+T VGIA K +AK+A+ AK L + +S +P+ + Sbjct: 119 KEVFEKYHITCSVGIASNKLIAKMASTNAKPNGM------LLIPQKCNEDFVSIMPLRAI 172 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF--NVVLERTVRELRGEPCLQLEEFAP 242 GIG + KL+ G+ TV L + D + + ++ + +RG + Sbjct: 173 PGIGSSLIHKLEDWGLSTVASLKNVDEATLTRITGSQILARMIYQSVRGIDERTV-TAHA 231 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 ++ I R+ T+ +++Q + + ++LR+ R I+ ++ Sbjct: 232 PEKSIGTERTLDTDTTNENAVKQLLQQCCSEVTQQLRNRKLMARTITLKLRFGD------ 285 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-------------RYQKAGVMLGD 349 + + S L T + + L H + AGV + Sbjct: 286 LHYVTRSSTLQNATDSTHEFYEHVVVLLSRANPTVHNYILGGNNTKLLSPVRLAGVTANN 345 Query: 350 FFSQGVAQL--------------------NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 L N+ +D + K G Sbjct: 346 LVPANKVSLQPSLNDILEENTRESKNPTQNIMSTMNKNTRLRHAEHALDAVRKKYGNNAA 405 Query: 390 YFA 392 + Sbjct: 406 HIG 408 >UniRef50_UPI000186DDA3 terminal deoxycytidyl transferase rev1, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186DDA3 Length = 752 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 73/434 (16%), Positives = 149/434 (34%), Gaps = 63/434 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---------------------------- 32 ++ D++ F+ S P L G+PV V + Sbjct: 212 IYMHIDMDCFFVSVALRNYPHLKGQPVAVTHSKINFGANNSLIETKLNLAVENLDSLKLK 271 Query: 33 ------------NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADM 80 + + + + EA+ GV G L + S +++ Y ++ Sbjct: 272 SDEGVNQESKAFSMSEIASCSYEARKAGVCNGMYLGSALKLCP--NLKTISYDFKGYKEV 329 Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVG 138 S + +T+ E + +E S DE + D T V + + F +R + ++T T VG Sbjct: 330 SFMLYNTVAEYTLDIEPVSCDELYIDCTSVLSQIKINPIKFANILRQEIEEKTKCTSSVG 389 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 I++ K LA+LA AK E+ + + + + DV GIGR I L + Sbjct: 390 ISENKLLARLATKKAKPNGVFF------LTPEKVEEFIKKVSIYDVPGIGRNIGGILKKL 443 Query: 199 GIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 ++T DL + + F+ K + + + RG ++ ++ + ++G R Sbjct: 444 SVETCEDLQNFSLSFLMKTLGSKIGKNLYDHCRGIDDRKINCNF-ERKSVSAEINYGIRF 502 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT---------SPFALNEPYYGNSA 308 D + + +++L + + I+ I + + + S Sbjct: 503 NDNEETEIFLKELSQEVSKRLVNIKMAGKNITLKIMFRAKDAPIEAAKYLGHGLCDVISR 562 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 SV L + D I N + + + G+ + S + Sbjct: 563 SVTLPQASNDENIIANNVINLYHLLNIPPNELRGIGIHVNKLDSINKLSRKIQSYFEIGK 622 Query: 369 GSEQLMTVMDTLNA 382 ++ D ++ Sbjct: 623 NLKKCD--CDRIDN 634 >UniRef50_D2P394 DNA polymerase V n=7 Tax=Listeria RepID=D2P394_LISMO Length = 426 Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 100/415 (24%), Positives = 169/415 (40%), Gaps = 18/415 (4%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKA-LGVKMGDPWF 56 DV +F+AS E V R D +VV+SN D V+A + + K +K G F Sbjct: 15 ILCVDVKSFFASVECVKRGLDPLQAFLVVMSNADRAGGLVLAASPQMKKVFRIKTGSRKF 74 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR 114 + + R +V +LY ++ + +YSIDEAF D+T + Sbjct: 75 EVPEDDPR--IVIAPPRMKLYLHVNELIQKIFLRYVSREDFHVYSIDEAFLDVTHSKKLF 132 Query: 115 D-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 ++I+A +L+ L V VGI LAKLA A K Q+ G+ + + Sbjct: 133 GSAEVIAKKIQADILKELRLYVTVGIGDNPLLAKLALDNAAKHQK--SGIAEWRYKDVPE 190 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + PV D WGIG+R + +L+ MGI ++ L+ +++K V+ E+ G Sbjct: 191 TVWKIRPVTDFWGIGKRTAFQLERMGIYSIYGLSQMPPSYLKKRLGVIGEQLYYHSHGID 250 Query: 234 CLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 +L E + P ++ S+ + D + I A +LR+ H I Sbjct: 251 YSRLSEKYKPIERSYGKSQILEKDYHDPNQIAIIIQEMVEEVAMRLRNHHVDTSVIHLSA 310 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 S ++ G S K++ T S++++ +Q + V Sbjct: 311 GYSRYST---RNGFSHQKKIM-ATDSSKELVPYFLEMFWK-YQENDAVRSVAVSCAGIKR 365 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + QL++F+D +QL +D + + G L A I +KR+ L Sbjct: 366 KTSMQLSVFEDYTKTLQQQQLERTIDKIRDRYGFNALMHANSLIDGATGLKRSAL 420 >UniRef50_B7GNF3 Transcriptional regulator, Fis family n=9 Tax=Bifidobacteriaceae RepID=B7GNF3_BIFLI Length = 448 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 86/417 (20%), Positives = 152/417 (36%), Gaps = 40/417 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E P L GKPV++ + V A + EA+ G+ P + L Sbjct: 47 VLHIDMDAFYASLEVARNPGLKGKPVIIGTGPRAVVSAASYEARRYGINSAMPAARAHQL 106 Query: 62 FRRCGVVCFSSNYELYADMSNRVM-STLEELSPRVEIYSIDEAFCDL-TGVRNCRDLTDF 119 V + Y MS+R+M ++ R E S+DE + D+ T + + Sbjct: 107 CP--NGVFLPVDMAYYRMMSHRIMHEVFLTVTDRFEQVSVDEGYMDVSTALLEWGRPSAI 164 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G IRA V +R H+T VGIA K +AK+A+ AK L R + + + Sbjct: 165 GAWIRAQVAERFHVTCSVGIACNKLVAKMASTNAKPDGM------LLIPAARSAEFVQMM 218 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF--NVVLERTVRELRGEPCLQL 237 P+ + GIG + K+L+A G+ +V +LA D + + G ++ Sbjct: 219 PLRGIPGIGPSLEKRLNAWGVHSVAELAQLDETALTRATGSPAAARGLWAASHGLDSRKI 278 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ I + E D + + S A LR + R ++ ++ + Sbjct: 279 TTV-REEKSIGSEETLAEDTRDMRVVCGLLRSACDEVASTLRRKGLVARTLTVKLRFADL 337 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW----------QAGHRYQKAGVML 347 + + S + PT + + R L + + AG+ Sbjct: 338 S------YQTRSFTMERPTDTAGVLYPECVRQLKVMLGLPASAESATPLPKTIRLAGMST 391 Query: 348 GDFFS-----QGVAQLNLFDDNAP------RPGSEQLMTVMDTLNAKEGRGTLYFAG 393 + ++ ++ A + +D + K G F Sbjct: 392 SSLSEAAATAVQPSLDDMLEEAANARGQTSQARLHDAEAALDAVRRKFGSKAAQFGA 448 >UniRef50_C3PHE2 DNA polymerase IV n=10 Tax=Corynebacterineae RepID=C3PHE2_CORA7 Length = 492 Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats. Identities = 82/375 (21%), Positives = 147/375 (39%), Gaps = 21/375 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + RP L G+PV+V + G V + EA+A G P F+ + Sbjct: 16 VLHIDMDAFFASVEQLTRPTLRGRPVLVGGTSGRGVVAGASYEARAYGAHSAMPMFRAQQ 75 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 L V +Y+ S RV + + + +E SIDEAF + + ++ + Sbjct: 76 LV-GYRAVVVQPRRAVYSAASRRVFGIIAQHAGVIEQLSIDEAFMEPAALLGATPAEVRE 134 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + +R + T L +G K AK+A+ AK + ER ++L+ Sbjct: 135 WSENLRRVIRTETGLPSSIGAGAGKQSAKIASGEAKPDGTF------VVPQERFKELIHP 188 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQL 237 LPV +WG G +KL A+G++T+ LA + + VV + +G + Sbjct: 189 LPVGKLWGAGPVTQQKLAAIGVETIGQLAAMSRKEVEISLGGVVGVQLWELAQGIDERPV 248 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++I ++ + + A+ A A +L + + R ++ ++ + F Sbjct: 249 APR-AIAKQISTEFTYPTDLRTAAEVDAALIRAAHGAHSRLLKDGRGARTVTVKLRMADF 307 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S S L T D + + A L + + GV Q Sbjct: 308 HIE------SRSATLSYATDDLKVLEAKALS-LARYPEELGPIRLVGVSYSGLE--EARQ 358 Query: 358 LNLFDDNAPRPGSEQ 372 LF + + Sbjct: 359 DVLFPELDREIVRQA 373 >UniRef50_B9XRF0 DNA polymerase III, alpha subunit n=1 Tax=bacterium Ellin514 RepID=B9XRF0_9BACT Length = 1420 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 84/411 (20%), Positives = 157/411 (38%), Gaps = 24/411 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+AS E L GK + V G + + + EA+ GV P + + L Sbjct: 13 IVHLDADAFFASVEQAADARLRGKAMAVGGEKRGIIASASYEARKFGVYTPMPTVRARKL 72 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + ++ ++E Y S + S + +P VEI SIDE + DLTG R + Sbjct: 73 CPK--LIIVPGDFEKYERFSRWMFSYAYDFTPEVEISSIDEGYFDLTGARK--SPLEIAE 128 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 IR + +TV GIA K ++++A+ K + + + LP Sbjct: 129 IIRGAIRGALKITVSEGIACNKLVSQIASKLNKPAAFKQVPLGGEIP------FLHPLPN 182 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 + G+G + KL+A G+ + +A T + ++ + G L + + Sbjct: 183 KWLPGVGPTTATKLNAAGLIRIGHIAKTPLDLLQLLMGNMARSLKEFADGIDERPLIQES 242 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 + +FG TD + + A ++R++ + R ++ ++ + A ++ Sbjct: 243 EPAKSYGHQETFGVDQTDEEFIEATLKRMADSLMAQVRADDKTIRTLTVKVRYNDMAEDQ 302 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-QLNL 360 LL PT DI + W+ + + L + +S +L L Sbjct: 303 AGES------LLEPTDLETDIYGRIRVLMKQAWRRRVSLRMVSLRLSNVYSGIFRAELAL 356 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 +L + +D L G+ + +Q++ A SP Y Sbjct: 357 ERSAEQHEAKRRLASAVDQLRQSRGKQVILRG-----HDFQLREA--SPDY 400 >UniRef50_A7E7M1 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A7E7M1_SCLS1 Length = 1255 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 69/398 (17%), Positives = 131/398 (32%), Gaps = 39/398 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+ + KP VV N + + N A+ GVK G Sbjct: 437 IMHVDFDSFFCAVSLKSAPEYFDKPAVVAHGNGTGSEIASCNYPARVFGVKNGMWMKNAI 496 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-------- 111 L + ++ Y + S + ++ + S+DEAF D+T + Sbjct: 497 KLCPD--IKVLPYDFPAYEEASKAFYEAILDVGGIFQSVSVDEAFVDITSLCLAAGGTDG 554 Query: 112 ----------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + G +R + ++T V VGI LAK+A AK + Sbjct: 555 VGIREGSIWREQERAEEIGNALRKVIREKTGCNVSVGIGGNILLAKVALRKAKPAGQYQ- 613 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NV 220 E + L V ++ G+ I KL+ +G+K V D+ + Sbjct: 614 -----IKPEEVLDFVGELDVQNLPGVAYSIGGKLEEIGVKFVKDVRQLSKDRLMTVLGPK 668 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 E+ RG ++ E ++ + ++G R + + + +L Sbjct: 669 TGEKIWDYSRGIDRAEVGEQV-VRKSVSAEVNWGIRFISQVEAEEFVQNLCIELQRRLID 727 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + R ++ I F + + S+ L T D+ I A L Sbjct: 728 QRVKGRQMTMKIMRKAADAPLDPPKFLGHGNCDTFNKSIVLGVATNDATIIGREAVSILR 787 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPG 369 + + + GV + + FD + + Sbjct: 788 SYGFSPGELRGLGVQMTKLEPVKSSNGTPFDGSQRKIN 825 >UniRef50_C5BNY2 DNA polymerase IV n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BNY2_TERTT Length = 360 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 74/366 (20%), Positives = 124/366 (33%), Gaps = 21/366 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D + F+A+ E PDL P+ V G + N A+ GV P K Sbjct: 8 IIHLDADCFFAALEIRENPDLADFPLAVGGDPGRRGVISTCNYLARQYGVHSAMPSAHAK 67 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L +V SSN+ LY +S ++ S ++E S+DEAF D++ + T Sbjct: 68 RLCPE--LVIRSSNFPLYKQVSAQMFEIFTRFSEKIEPLSLDEAFLDVSDCQQFHGSATL 125 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REIR V +TV G+A K LAK+A+ +K T ++ + + Sbjct: 126 IAREIRRQVETELGITVSAGVAPIKFLAKIASDWSKPNGLFT------VTPDKVTEFVKD 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + G+G+ +KL G+ DL + + F R G +++ Sbjct: 180 LPLQKLPGVGKVTREKLAREGLLYCRDLESYSEHELVQRFGRFGANLKRMSVGIDEREVK 239 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS--EHQYCRFISTFIKTSP 296 ++ + +F I+ + I E+ +K Sbjct: 240 SS-RERKSLSIETTFARDISSPGEIADQIDQLVVGLEERYNKLQRKVAVSKKFVKLKFDD 298 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F S K+ S++ + + GV L Sbjct: 299 FTQTTLESSVSRCGKIF----SSQEFERMCYAAWAR---QKRPLRLLGVGLSFAERSHPQ 351 Query: 357 QLNLFD 362 F Sbjct: 352 AQLSFP 357 >UniRef50_Q6F1D8 DNA polymerase IV (PolIV) n=1 Tax=Mesoplasma florum RepID=Q6F1D8_MESFL Length = 370 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 79/361 (21%), Positives = 158/361 (43%), Gaps = 15/361 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AF+ASCE L KPVVV NN ++A + +A+ G+K G P F+ K Sbjct: 5 VILHLDMDAFFASCEQAHDKTLKNKPVVVARNNDRSIIVAASYDARKYGIKAGTPIFEAK 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVR-NCRDLT 117 L ++ N +LY + S R+ + ++E + +VE+ IDE F D T + ++ Sbjct: 65 QLA-YGELIIKEGNRDLYEEYSERIFNLIKEQFTYKVEVLGIDECFIDATNIWEKYGNVQ 123 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + I+A V Q T LT +G + T+ +K+ + K + + E + L+ Sbjct: 124 NLCLAIQAAVYQETGLTCSIGASFTRLFSKMGSDMKKPNG------ITIITKENFKTLIW 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 + DV G+G +K++ + +KTV D D + I F + ++ ++L G ++ Sbjct: 178 NKSIKDVIGVGSSSLEKMELLNVKTVNDFVKLDEKIIADSFGLSGQKMYQKLHGIKNDEI 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS-- 295 + + + I ++F ++ + + + + A + +++ + + ++ IK Sbjct: 238 AYWETSVKSISKEKTFDKKNMAIEDIEEILFNLAEKVVLRMQKNNILAKTVTLSIKFYNQ 297 Query: 296 --PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 F E + S T + + LD I+ G G+ + + + Sbjct: 298 EINFDKKEQKKRRTYSETFNEYTDSLEKLYSRVKVILDDIYD-GESISLIGIGVTNLIEK 356 Query: 354 G 354 Sbjct: 357 D 357 >UniRef50_UPI000180C22E PREDICTED: similar to polymerase (DNA directed), kappa n=1 Tax=Ciona intestinalis RepID=UPI000180C22E Length = 706 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 79/418 (18%), Positives = 139/418 (33%), Gaps = 56/418 (13%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E RP+L KP+ V + N A+ GV+ P F K L Sbjct: 108 IIHIDMDAFYAAVEERDRPELKQKPMAVGGM--DMLSTSNYVARKYGVRAAMPGFIAKKL 165 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-------- 113 ++ +N++ Y ++S E S+DEAF D+T Sbjct: 166 CP--NLIIVPTNFDKYREVSKETQEIFSEYDENFCGMSLDEAFLDITDHLQKRLIYDQEE 223 Query: 114 ----------------------------RDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + +EIR + Q+T LT GIA L Sbjct: 224 RTFHYHPTLAPTTTSEDTDDKKSSETFGFSAEEVAKEIRFRIQQKTLLTASAGIAPNTML 283 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD 205 AK+ + K + N + K + PV V GIG+ + L ++G++ D Sbjct: 284 AKIGSDLNKPNGQT----FFAPNRDEIMKFIKDFPVRKVNGIGKVTEQLLSSLGVQKCGD 339 Query: 206 LADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + + + R G LE ++ I R+F I++ + Sbjct: 340 IYEMRAELMLLFSATSCSFFFRMCLGCSSNILEPDG-ERKSISTERTFST-ISNRDELFA 397 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 + A ++ ++ + ++ K F L+ + S + P + + I Sbjct: 398 KLDELCHSLAADMKKQNVQGKTLTLKTKNVDFQLH------TRSKTINVPMTNYQTIFPV 451 Query: 326 ATRSLDA---IWQAGHRYQKAGVMLGDFFS-QGVAQLNLFDDNAPRPGSEQLMTVMDT 379 A L + GV L + AQ ++ A + + Sbjct: 452 AQELLKQEILNANNKLSLRLMGVGLSKLETGTTSAQTSILKFFAGNTKPQSCDKTLSA 509 >UniRef50_C2HDM1 Possible DNA-directed DNA polymerase n=83 Tax=Firmicutes RepID=C2HDM1_ENTFC Length = 471 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 91/424 (21%), Positives = 166/424 (39%), Gaps = 24/424 (5%) Query: 2 FALCDVNAFYASCETVF-RPDLWGKPVVVLS--------NNDGCVIARNAEAKA-LGVKM 51 D +FYAS E V D +VV+S G ++A + AK G+ Sbjct: 30 ILCIDCKSFYASVECVEKDLDPLTTKLVVMSYPSDSTETRGSGLILASSPAAKKAYGITN 89 Query: 52 GDPWFKQKDLF-RRC-GVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDL 107 + +DL + + Y + + + + ++ + +YS+DE+F D+ Sbjct: 90 ---ISRARDLPFPYPSDLYIVAPRMAYYMEKNREINTIYKKYADEANHHVYSVDESFLDV 146 Query: 108 TGVRNCRD---LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV 164 T D + I V ++T + +GI LAKLA K +Q + Sbjct: 147 TNSMALFGKTNAYDMAKLIHKDVFEQTGIYTTIGIGDNPLLAKLALDNGSKDGKQM--IA 204 Query: 165 DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER 224 + + KL + + D WGIG+R +K+L MGI +V DLA D ++ ++ + Sbjct: 205 EWRYEDVPEKLWTISDITDFWGIGKRTAKRLKQMGIHSVYDLAHADYYHLKSTLGIIGTQ 264 Query: 225 TVRELRGEPCLQL-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 G L +E+ P + I S+ T + I A + +LR Sbjct: 265 LYAHAWGIDRSFLGQEYIPKSRSIGNSQILDRDYTRQEEIEIVIKEMADQVGTRLRRSAA 324 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 + +S ++ S L+ + T SR++ +A ++ ++ Sbjct: 325 KAQVVSLWVGYSLGYLDPNGKTGFHQQTKIEATNASRNLADALLTIFHQHYR-CQDIRRI 383 Query: 344 GVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 GV + QLNLF++ + ++ V+DT+ K G ++ A +Q + Sbjct: 384 GVNCSNLVYATGLQLNLFENPEKQINEAKVDFVVDTIRKKYGFKSIIHAHSLLQGGRAIA 443 Query: 404 RAML 407 R+ L Sbjct: 444 RSSL 447 >UniRef50_C5CJ42 DNA-directed DNA polymerase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CJ42_KOSOT Length = 424 Score = 255 bits (650), Expect = 4e-66, Method: Composition-based stats. Identities = 89/399 (22%), Positives = 155/399 (38%), Gaps = 26/399 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 A D++AF+AS E P L GKP++V V++ + EAK GVK G P FK Sbjct: 42 IAHVDMDAFFASVEQASNPYLKGKPIIVTGKDTRHSVVVSASYEAKKYGVKAGMPAFKAL 101 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 ++ + + + Y +S +M LE +SPR + SIDEAF DL+ + D + Sbjct: 102 EICPKA--LFVPVDSGKYTYVSEEIMKRLEFISPRYSVASIDEAFIDLSVYHSLSDSINA 159 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + R ++ + ++ +G+A +AK+A+ K + ++ + + Sbjct: 160 LKLFRTSIEKTFGISFSIGVAVNPLIAKIASDFNKPRG------FVVVKEGSEKAFLQNV 213 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR-GEPCLQLE 238 + V GIG KL+ G K +L + D F+ +F V+ L +L Sbjct: 214 DISQVPGIGPHTLMKLENFGFKKASELLEADEFFLYHNFGNSFLGLVKSLTVKNYPKELF 273 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + S + + + + A+A ++R R S F+K S F+ Sbjct: 274 FKKEPPKSVGHSMTLNHDVNSIELIERVASFLGAKAVYRMRKYGYQARGTSLFLKYSDFS 333 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV--A 356 + + L + N + IW G + GV L Sbjct: 334 VAR------ITRSLSFYISRPEHLNNVLYWLIREIWN-GEAVRAVGVSLYKLKPVNKNVY 386 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 Q NLF + + V+ L G +++ A Sbjct: 387 QENLF------KKEKDTVEVVLNLQNHFGEYSIFPASIL 419 >UniRef50_B8M4C5 DNA-directed polymerase kappa, putative n=14 Tax=Leotiomyceta RepID=B8M4C5_TALSN Length = 654 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 82/366 (22%), Positives = 144/366 (39%), Gaps = 21/366 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+A+ E + RP+L P V G + N A+ G + G F K L Sbjct: 119 VVHVDCDAFFAAVEELDRPELKHLPFAVG---KGVLTTCNYVARKFGCRSGMAGFVAKKL 175 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTDF 119 ++C NYE Y+ + + + + P E SIDEA+ ++T N D + Sbjct: 176 CPD--LICIPQNYEKYSAKAEEIRAIFAQYDPCFESASIDEAYLNITAYCDENNMDPQEA 233 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +++RA + + T +TV GIA LAK+A++ K + S E + L Sbjct: 234 VQQMRARIAEETKITVSAGIATNTKLAKIASNQNKPNGQY----FIPSEREAIMSFVKDL 289 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV V GIGR ++L A+GI+T + R + ++ G +++ Sbjct: 290 PVRKVNGIGRVFERELRAVGIETCGQIYPQRALLKRLFGGKAFQFLMQCYLGLGRTKIQP 349 Query: 240 -FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F E I+D ++R + A A+ L R + +K F Sbjct: 350 AEDYERKSVGTESTFAE-ISDPDAIRVKLRWAADELAKDLARTQFKGRTLVLKVKLHTFE 408 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVA 356 + + V + D+ + L + + R + G+ S Sbjct: 409 V------YTRQVAPPKAVWLADDLYTYSLPILAKLQKEIPNMRLRLLGLRCTHLVSTKKV 462 Query: 357 QLNLFD 362 L+ F Sbjct: 463 GLDFFG 468 >UniRef50_UPI0001C32444 DNA-directed DNA polymerase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32444 Length = 370 Score = 254 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 79/359 (22%), Positives = 140/359 (38%), Gaps = 21/359 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 + A D +AFYAS E + RPDL K V+V + V + A+ GV P + K Sbjct: 14 VIAHLDCDAFYASVELLRRPDLRDKAVIVAHDGPRSVVTTASYAARRYGVGSAMPLSRAK 73 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L + ++E Y +S + + R++ +DEA+ DLTGV Sbjct: 74 RLCPHA--ILLPPDFESYRRVSRALWEIVGGRLGRLQHLGLDEAYADLTGVEK---PVRV 128 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 RE+ V T +TV VG+ ++ +AK+ + K G E + + Sbjct: 129 LRELVEQVRAETGITVSVGLGPSRLIAKICSDLGKPAGFVAMG------REEAAQRFAGH 182 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLE 238 + GIG + ++L MGI+T+ L T + + F +R ++E Sbjct: 183 SPKLLPGIGPKSVERLREMGIETIGQLQATPEERLTERFGARHGRDLLRRAHFHDSSEVE 242 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + R+F E +T + + + A E L+ + R I+ ++ Sbjct: 243 TS-RVLKSRSNERTFDEDVTSLTQLEEILRRLAQGLCEGLQRREKRGRTIAIKVRLDD-- 299 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + + + + T D+ + + A L A + + GV L F + A+ Sbjct: 300 ----WTTVTRARTVDAHTNDTALVTDVALELLRA-YAPPRPVRLLGVRLASFEDEEGAK 353 >UniRef50_Q7NAR2 UmuC/DinP-like n=1 Tax=Mycoplasma gallisepticum RepID=Q7NAR2_MYCGA Length = 405 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 78/400 (19%), Positives = 157/400 (39%), Gaps = 26/400 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D +AF+AS E F P+ KP+VV S +N V + N A+ GV+ P F+ K Sbjct: 13 IFHIDFDAFFASVEENFNPEYNNKPLVVGSKSNGSIVSSANYIARKFGVRSAMPIFQAKK 72 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEEL-SPRVEIYSIDEAFCDLTGVRNCR---DL 116 L ++ +Y Y +S V S L + S ++E+ SIDE + D+T + Sbjct: 73 LCP--SLIIAEVDYPKYERVSAYVFSYLRDFVSNKMEVASIDECYMDVTDILEKNSEISA 130 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +D ++I+ + + T LTV +GI+ LAK+A+ K + + + Sbjct: 131 SDLAKKIQKQIYELTQLTVSIGISSNLFLAKMASDQNKPNGVYE------IWPDEIEEKL 184 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADT-DIRFIRKHFNVVLERTVRELRGEPCL 235 L + ++ IG + L+ + IK + + A + + F + G+ Sbjct: 185 WPLEIKKMYLIGSKKIPLLNQLNIKNIGNFAQFENKELLIDIFKNMYWDHYNHAHGKGSD 244 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ +++ I S++ +++DY S+ + +L++ + + IS I+T Sbjct: 245 FVDYERNSRKSISVSKNIRHKVSDYESLLKLFNDLFDDVYSRLKNHNLLAKNISVSIRTE 304 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 S S + N A + + + G+ ++ Sbjct: 305 K--------VRSLSFSFKQYSDKKTLFYNKAIDLFERL-HNNQLVANISISFGNITNKYK 355 Query: 356 AQLNLFDDNAPRPGSEQ---LMTVMDTLNAKEGRGTLYFA 392 N+ + L +++ +N + + + A Sbjct: 356 FMPNINIYEELSKEQKDTMLLKKIVNQINKEYNKELVNIA 395 >UniRef50_A6DIV6 DNA polymerase IV n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIV6_9BACT Length = 354 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 79/369 (21%), Positives = 138/369 (37%), Gaps = 31/369 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+A+ E +P+L GK V V G + A N EA+ GV Sbjct: 8 IIHVDMDCFFAAVEVRDQPELKGKAVAVGGAAKRRGVIAAANYEARNFGVHSALSTAIAL 67 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTD 118 ++ N Y ++S V + + VE S+DEAF D++ + T Sbjct: 68 RRCPE--LIIVRPNMSKYKEVSTEVFKIFRKYTHLVEAISLDEAFLDVSECPLHHGSGTL 125 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+ + +T L GIA K LAK+A+ K T E K + Sbjct: 126 IAEAIKKDIYAKTGLRASAGIAPNKYLAKIASDWMKPDGIYT------IPPENIEKFVQQ 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQL 237 LPV +WG+G+ ++L G++T DL ++ + K E + +G ++ Sbjct: 180 LPVKKIWGVGKETLRELRKFGLETCADLQKISVKNLAKLIGTNRAEELLELAKGIDNREV 239 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE-----HQYCRFISTFI 292 + ++ R+F + + A+ +KL++ + + Sbjct: 240 K-ANRERKSYTRERTFDSDL-SHGECSDALKVIFDECKKKLKAYLEEKPQYKIKTSVLKV 297 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 K + F S +V+ + I + T++L+ R GV F Sbjct: 298 KFADFT--------STTVECGDLNFEWSVIESLLTKALERNQLRV-RLMGCGV---KFTK 345 Query: 353 QGVAQLNLF 361 AQ +LF Sbjct: 346 HDSAQPDLF 354 >UniRef50_A4VCZ3 DNA polymerase IV / kappa n=1 Tax=Tetrahymena thermophila SB210 RepID=A4VCZ3_TETTH Length = 950 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 79/362 (21%), Positives = 139/362 (38%), Gaps = 24/362 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++ FY +CE RP L PV V + + N A+ GV+ P F K Sbjct: 105 IWVHFDMDMFYVACELKDRPQLKDLPVAVGGMS--MISTANYVARKFGVRSAMPGFIAKK 162 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL---- 116 L + ++ N+E Y S++ L + P +E +DEA D+T ++ Sbjct: 163 LCPQ--LILIPCNFEKYRKASDQFKKVLYQYDPNLESMGLDEANLDITDYLQQNNINSDA 220 Query: 117 --TDFGREIRATVLQRTH-LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 D IR V + T LT GI K LAK+ + K + +++ E+ + Sbjct: 221 QIYDLCHSIRNQVFESTGGLTCSCGIGPNKMLAKICSDMNKPNGQFQL----INDEEKIK 276 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 M LP+ + GIG + L +GI+ + + I ++ + V G Sbjct: 277 DFMKDLPIRKIPGIGNVTEQILKGIGIEKCSQILERVIDIKICFKDLSFDHLVSSALGIG 336 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 E K+ + SR+F + I+ + + I + AE ++E + + ++ K Sbjct: 337 -RSWHEEETEKKSLSVSRTF-QAISTIEEINEKIHQISQLLAEDAKAEQKIGKHLAVSFK 394 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 F S + L QDS I A + + + G+ L + Sbjct: 395 NVKFQ------MRSKNRMLDKYIQDSEQIEKVAKELVKEL-LPTEPLRLIGIRLSQLADE 447 Query: 354 GV 355 Sbjct: 448 NE 449 >UniRef50_A9V4K7 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V4K7_MONBE Length = 1412 Score = 253 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 125/388 (32%), Gaps = 56/388 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D++AF+ S R +L +PV + + + + N A+ G++ G + Sbjct: 322 VIVHIDLDAFFVSIALRERQELQDQPVAIAHSGREGSSEISSCNYPARQFGIRNGMSMRR 381 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC---- 113 + ++ Y S L + R++ S+DEA+ DLTG+ Sbjct: 382 ALAACPH--LQTLPYEFDKYKLASQAFYRLLTARTLRIQAVSMDEAYLDLTGLVRPDYSP 439 Query: 114 -------------------------------RDLTDFGREIRATVLQRTHLTVGVGIAQT 142 + T+F E+R + + + GI Sbjct: 440 HLWQAVQQRQHEGHPPLSPAPLQEASLPVPTQSATEFVAELRTAIAEELGIAASAGIGPN 499 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 LA+L AK + + + + D+ G+G + +L MGI + Sbjct: 500 VLLARLCTRLAKPNGLYSYA------EANVERFIDQTALKDLPGVGWCTAGRLTTMGIAS 553 Query: 203 VLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 DL + ++ F + + RG L++ AP + + ++G R Sbjct: 554 CADLRALPLDRLQADFGHKNGQALYNACRGIDPSPLKDNAPP-KSVSVEITWGVRFDKDA 612 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIK--------TSPFALNEPYYGNSASVKLL 313 + + + +L + Q ++ IK + P + S L Sbjct: 613 QVDTFVSNLCREVCSRLEAVGQLATRVTLKIKQRKPDAGDPHKRLGHGPCDDRNRSTALP 672 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQ 341 +PT D I + + Sbjct: 673 SPTDDLATITATCLELTHLLAVPVLDVR 700 >UniRef50_B2AY86 Predicted CDS Pa_1_10240 n=3 Tax=Sordariomycetes RepID=B2AY86_PODAN Length = 1122 Score = 253 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 74/384 (19%), Positives = 128/384 (33%), Gaps = 39/384 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+ KP VV + + + N A+ GVK G + Sbjct: 344 ILHVDFDSFFCAISLQKCPEYADKPTVVAHGSGTGSEIASCNYPARKFGVKNGMWMKRAL 403 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG---------- 109 +L G+ ++ Y S L + V+ SIDEA D+T Sbjct: 404 ELCP--GLKVLPYDFAGYEKASEVFYQVLLGVGGVVQSVSIDEALVDVTDVVLRGVGSTG 461 Query: 110 --------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + R +R V +RT V VGI LAK+A AK + Sbjct: 462 VGVGEGSVCREQEKAEEIARGLRGEVRRRTGCEVSVGIGGNVLLAKVALRRAKPAGQHQ- 520 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NV 220 E + L V+ + G+ I +L+ MGI+ V D+ T + Sbjct: 521 -----IRPEEVLDSIGELGVEGLPGVAGSIGGRLEEMGIRFVKDIRGTTRERLVSVLGPK 575 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 ER RG +L E P ++ + ++G R + + + ++L + Sbjct: 576 TGERLWDYARGVDRSELGEQ-PVRKSVSADVNWGIRFVSQEEAEEFVRNLCGELEKRLLA 634 Query: 281 EHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 E + ++ I + + + S T D+ I A L Sbjct: 635 EGVKGKLLTVKIMRRSLDAPLDPAKHLGHGKCDTFNKSASFGVATCDAEVIGKEAVGILR 694 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGV 355 + + + GV + Sbjct: 695 SYKFSPGDLRGIGVQMTKLDHIKP 718 >UniRef50_A1A051 DNA-damage-inducible protein P n=10 Tax=Bifidobacterium RepID=A1A051_BIFAA Length = 471 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 83/431 (19%), Positives = 151/431 (35%), Gaps = 48/431 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E P+ KPV++ N V A N EA+ G+ + + L Sbjct: 51 VLHIDMDAFFASLEVARHPEYADKPVIIGIGNRSVVSAANYEARKYGINSAMASSRARKL 110 Query: 62 FRRCGVVCFSSNYELYADMSNRVM-STLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDF 119 V + Y +MS R+ ++ R+E S+DE + D++G + + Sbjct: 111 CP--NGVFLPVDIHYYREMSRRIFTEVFSRVTDRIEQVSVDECYMDVSGALLRWKSPRAI 168 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G IR V +R H+T VGIA K +AK+A+ AK + + R + + + Sbjct: 169 GAWIRDQVARRYHITCSVGIAANKLVAKMASTNAKPDGM------LMIPVARHAEFVQMM 222 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN--VVLERTVRELRGEPCLQL 237 P+ + GIG + K+L+A G+ +V DLA + + + + RG + Sbjct: 223 PLRGIPGIGPSLEKRLNAWGVDSVADLAKMSMESLEQATGSAISARGLYMAARGLDDRPV 282 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + R+F + D + + A LR R + ++ Sbjct: 283 APR-AQGKSVGAERTFDKDTQDMRQVTSMLRWCCDDVAGTLRRRGLMARKVMVKLRFPDL 341 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG----------HRYQKAGVML 347 + + L PT + + L A+ + AG+ Sbjct: 342 S------YATKGHTLDCPTDAASMLYPQCVALLLAMMGMPESSIDAISLTRPVRLAGMSA 395 Query: 348 GDFFSQGVAQLNLF-------------------DDNAPRPGSEQLMTVMDTLNAKEGRGT 388 G A + L + + +D + K G+G+ Sbjct: 396 GGLVEAADAAVQLSLDDMLEEQNEAQRGRGTDTEPSTQSERLRGAEAALDAVRLKYGKGS 455 Query: 389 LYFAGQGIQQQ 399 + Sbjct: 456 VRLGIWRTGPS 466 >UniRef50_B6K5W3 DNA polymerase kappa n=2 Tax=cellular organisms RepID=B6K5W3_SCHJY Length = 532 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 71/372 (19%), Positives = 138/372 (37%), Gaps = 30/372 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AFYAS E + +P KP+ V + N A+ GV+ P F + Sbjct: 116 IIVHVDCDAFYASVEELEKPAYKTKPMAVGQG---VLCTANYCARKFGVRSAMPEFIARQ 172 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD----L 116 L ++ Y + S + L+E P + S+DEA+ DLT + + Sbjct: 173 LCP--NLIVLPLRMMKYQEKSAEIAKILQEYDPNMCKASVDEAYLDLTDYLTKHNEEETV 230 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +R TV ++T +TV GI LAK+A++ K + + G E + M Sbjct: 231 EAVVEHLRQTVAEKTGITVSCGIGANLMLAKIASNMRKPNDQFSIGR----TREAILEFM 286 Query: 177 SALPVDDVW--------GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 LP V+ GIGR + ++L ++ + D+ + + Sbjct: 287 DTLPCRKVYLELNHNVNGIGRVLEQELSSLNVHNCGDILRRKGYLYYVFQEKSFQNLLSY 346 Query: 229 LRGEPCLQLEEFAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 G ++ ++ I +F + ++ Q + +E ++ + Sbjct: 347 ALGISNNVVKPTDASNRKSIGNEMTFSIPMGSEKTISQKLKQLCFSVSETMKQRNLVGNS 406 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + +KT+ F + + L T T +S I + L ++ + + GV + Sbjct: 407 VVLKLKTTSFEVR------TRQTNLNTYTNESDIIYKYVLQLLS--YELPVQVRLLGVRM 458 Query: 348 GDFFSQGVAQLN 359 + + + Sbjct: 459 TKLQDASIYEES 470 >UniRef50_A7HFE4 DNA-directed DNA polymerase n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HFE4_ANADF Length = 459 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 93/431 (21%), Positives = 155/431 (35%), Gaps = 53/431 (12%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+ S E + P L GKPVVV + G V A + E + LGVK G F+ Sbjct: 18 ICCLDLDTFFVSVERLLDPTLEGKPVVVGGKPGSRGVVTAASYEVRRLGVKSGMSLFEAG 77 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 + + +++Y + RV +P V + SIDE + D +G Sbjct: 78 KRAP--NAIYLPTRHDVYGTYAERVREIARRFAPTVRVASIDEMYLDFSGCERLYRSAGA 135 Query: 120 GR------------------EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R ++ + L G+A +K +AK+A+ AK Sbjct: 136 ARENGAEDRAGDAIIEGAVLQLTTAIFDELGLPSSAGVATSKVVAKVASALAKPRG---- 191 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV 221 V L +R +++ LPV GIG KL A G +T+ +A+ + ++ F Sbjct: 192 --VMLVPAGVERAVLAPLPVRSFPGIGPVAEAKLHAAGYQTLGAVAEASLADLQTIFGAW 249 Query: 222 LERTVRELRGEPCLQLEEFAPTKQ----------EIICSRSFGERITDYPSMRQAICSYA 271 R ++G L P I R+F E +TD S+ +C Sbjct: 250 AASISRGVQGLGSGDLCRERPAFAEHDPEGETVGSISNERTFREDVTDPASIEAVLCGLC 309 Query: 272 ARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 R + R H R ++ ++ + F + + S T ++ Sbjct: 310 ERVCWRARRRHVKARTVTLKLRYADF------HTLTRSHT-TMATNSELELYPIVKEMFA 362 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 A + GV L QL LFD +E++ V+D + A+ G + Sbjct: 363 AARTRSLPIRLLGVQLSSL--GTFEQLPLFD------RNERVGAVVDGIRARFGFAAVSL 414 Query: 392 AGQGIQQQWQM 402 A + Sbjct: 415 ATGRGRPDEAR 425 >UniRef50_A3NBC4 DNA polymerase IV n=15 Tax=pseudomallei group RepID=A3NBC4_BURP6 Length = 403 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 74/372 (19%), Positives = 131/372 (35%), Gaps = 27/372 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 CD + FYAS E P L G+P+ V G + N +A+ GV Sbjct: 21 IIHCDCDCFYASVEMRDDPSLRGRPLAVGGRPDQRGVIATCNYDARRYGVHSAMSSALAM 80 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 ++ + Y S +M+ + +P VE S+DEA+ D++ C T Sbjct: 81 RKCPD--LLILPPAMDKYRAASRLIMAIYRDYTPDVEPLSLDEAYLDVSRATRCQGSGTL 138 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REIR V +TV G+A K +AK+A+ K + + ++A Sbjct: 139 IAREIRERVRDTVGVTVSAGVAPNKFIAKIASDWNKPDG------LFVVRPHEVDAFVAA 192 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G+ + +LD +GI+T L D + + + F R RG + Sbjct: 193 LPVRKLHGVGKVTAARLDKLGIRTCAQLRDWSLFDLHRTFGAFGRRLHELARGIDERPVR 252 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH--QYCRFISTFIKTSP 296 ++ + ++ + + + I ++ + R + I+ + Sbjct: 253 -ADQARKSVSVETTYVQDLAALDACAAEIRRLTGLLDARIERAGAARSIRKLYVKIRFAD 311 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + D+ D A + + + GV + Sbjct: 312 F-----------QRTTVECVADATDAETAVALLAKGLARRRQAVRLLGVGVRIDEDTAER 360 Query: 357 QLN--LFDDNAP 366 LFDD Sbjct: 361 HGQIALFDDEDM 372 >UniRef50_B7QCT1 Terminal deoxycytidyl transferase rev1, putative n=1 Tax=Ixodes scapularis RepID=B7QCT1_IXOSC Length = 904 Score = 251 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 77/402 (19%), Positives = 143/402 (35%), Gaps = 52/402 (12%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---------------------------- 32 + D++ F+ S RP L GKPV V Sbjct: 258 VLMHIDMDCFFVSVGLRSRPHLKGKPVAVCHGKNGGIQPSSSHSRASDVPGTSGSGADGK 317 Query: 33 ---NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLE 89 + V + + EA+ GV+ G + K L +V +E Y+++S + T+ Sbjct: 318 GLMSMSEVASCSYEARDAGVRSGMFLGRAKQLCP--NLVAIPYEFESYSEVSKILYDTVA 375 Query: 90 ELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + +E S DE + D+T V + DF +R + ++T T VG+ A+ Sbjct: 376 SYTLDIEAVSCDELYADVTKVLQEAECTPNDFASFLRKEIEEKTCCTASVGLGPNMLAAR 435 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 +AN +AK + + + A+ V + G+G R+ +L MGI+T L Sbjct: 436 VANRSAKPNGHRF------VSTSELLEFFKAVAVKHLPGVGYRLQSQLTDMGIETCEQLQ 489 Query: 208 DTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + ++ F + RG L+ ++ + ++G R + M + Sbjct: 490 AVSMETLKSKFGVKTGTLLFQHARGSDDKVLQFNK-VRKSVSAEVNYGIRFKEANDMNKF 548 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQ 317 I + ++LR R +S +K + F + + SV+LL T Sbjct: 549 IGQLSEEVEKRLREAGVQGRAVSLKLKVRQKDAPLNPTKFMGHGMCDNITKSVQLLAATS 608 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + I + + G+ +G + Q Sbjct: 609 SAAAISRECCNLAAQLHLVPSDIRGVGIQVGRLEPRPGVQSC 650 >UniRef50_Q47E66 UMUC-like DNA-repair protein n=2 Tax=Betaproteobacteria RepID=Q47E66_DECAR Length = 387 Score = 251 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 82/377 (21%), Positives = 141/377 (37%), Gaps = 44/377 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN----------------------DGCVIA 39 A D++AF+AS E + P+L G+PVVV N G V Sbjct: 14 IAHLDMDAFFASVELLNYPELRGQPVVVGGRNVNQPISQPDGTKRFGRLREYVGRGVVTT 73 Query: 40 RNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYS 99 EA+A GV G K ++ G + +N++ Y + S R + + ++P +E Sbjct: 74 STYEARAFGVFSGMGLMKSAEMAP--GTILLPANFDAYLNYSRRFKAAVATIAPLIEDRG 131 Query: 100 IDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 IDE + DL+ + R I+ V T LT +GI K L+K+ + K Sbjct: 132 IDEIYIDLSDIDEESLP--LARRIKQAVFDATGLTCSIGITPNKLLSKICSDLQKPDGIT 189 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF- 218 G+ + L + GIG + +++L+ +GI+T+ LA T + + HF Sbjct: 190 ILGIA------DIESRIWPLAAKKINGIGPKANERLEKLGIQTIGQLAATPVELLLNHFG 243 Query: 219 NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT---DYPSMRQAICSYAARAA 275 + + G ++ + I +F + D + + R A Sbjct: 244 RSTGQWMHQVAHGRDDRPVKTS-RETKSISRESTFQRDLHAKQDRSELSEIFTGICLRVA 302 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 + L+ + + I ++ + F + L T D I AA L + Sbjct: 303 DDLKRKGLVAKTIGIKVRYADFQA------VTRDFTLDLATDDGMTIRRAAGECLKRVPL 356 Query: 336 AGHRYQKAGVMLGDFFS 352 R + GV S Sbjct: 357 E-KRIRLLGVRASALAS 372 >UniRef50_C1I721 DNA-damage repair protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I721_9CLOT Length = 415 Score = 250 bits (638), Expect = 8e-65, Method: Composition-based stats. Identities = 93/409 (22%), Positives = 160/409 (39%), Gaps = 29/409 (7%) Query: 1 MFALCDVNAFYASCETVFRPDL-------WGKPVVVLSN---NDGCVIARNAEAKALGVK 50 + DVN+ Y S V L P +V N G V+A++ AK +K Sbjct: 5 VIFHIDVNSAYLSWTAVRMLQLGETTEDIREIPSIVGGNTDERHGIVLAKSILAKRYNIK 64 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + F NY L+ D SN + + L E SP+++ YS+DE F D++ Sbjct: 65 TGEPVVDALKKCP--NLKIFKPNYRLFMDCSNAMYNLLYEYSPKIQRYSVDEVFIDMSHF 122 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + + EI+ + V +GI+ K LAK+A+ K T E Sbjct: 123 KENY--MEKAIEIQNRIRSELGFNVNIGISTNKLLAKMASDLEPKNAIHT------LFKE 174 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 + M LPVD+++ +GR KLD + I T+ +LA+ DI + F + Sbjct: 175 EIQNKMWTLPVDNLFMVGRATKSKLDKLNINTIGELANFDIGILESIFKSHGKVIHNYAN 234 Query: 231 GEPCLQLEEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G + ++ + I S + +T + I S +LR+ + CR IS Sbjct: 235 GIEESSVRKYNYVNVKGIGNSTTIAWDVTSKDEALKIILSLTESVCIRLRNNNSLCRVIS 294 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 IK F L + +I ++ + W+ G ++ GV + + Sbjct: 295 ISIKGFNFE------RYIHQRTLSNYIDCTEEIYKEMVKAFNEAWR-GETIRQLGVRVSE 347 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + Q +LFD + L +D++ + G ++ + Sbjct: 348 LCNNEFFQSSLFD-SKKLEKQRALDKTIDSIRERYGNYSVIRSTFLHSG 395 >UniRef50_D2LRT2 DNA-directed DNA polymerase n=3 Tax=Bacillus RepID=D2LRT2_BACS4 Length = 424 Score = 250 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 88/415 (21%), Positives = 164/415 (39%), Gaps = 18/415 (4%) Query: 2 FALCDVNAFYASCETVFRPD-LWGKPVVVLS---NNDGCVIARNAEAKA-LGVKMGDPWF 56 D+ +FYASC + + + V+ ++A K G+K G+ F Sbjct: 13 ILCIDMKSFYASCAAIALGEDPLTSHLAVVGDTAREGSVILAATPALKRDFGIKTGNRLF 72 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLTGVRN-C 113 + + +++ Y +S +V + ++ P + YS+DE+F D+ G Sbjct: 73 EVPK---DSKIKLVNASMATYLSISVQVTALFQQYVPPEAIHTYSVDESFLDICGTEKIW 129 Query: 114 RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + + +IR + +R L+ +GI ++K+ K Q G+ + + + Sbjct: 130 GNDRELALKIRDDLFKRFGLSCAIGIGPNMLMSKVCLDIEAKNQ--PSGIAKWTYADVKT 187 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 KL P+ +WGIG +I +L +GI ++ LA+ + + K F V+ + G Sbjct: 188 KLWQISPLQKMWGIGSKIEARLHRLGIFSIGHLANYRLDKLEKVFGVMGNQLYYHAWGID 247 Query: 234 CLQL-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 ++ + S+ TD +++ I A + R E++ + IS I Sbjct: 248 FSEVGAPILNGQISYGKSQILMRDYTDKLEIKRVILEMCEEVAARARRENKAGQTISLGI 307 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 S A G + ++ PT + ++ A + D + G ++ + L + Sbjct: 308 GYSKVARER---GFHRQLTVVEPTNITMELYEACLKIFDKHYN-GSIVRQVSISLANICG 363 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 V QLNLFD + RP L VMD + K G + A R L Sbjct: 364 DDVIQLNLFDQDQLRPKKRDLGYVMDAIRKKHGPNAVLRAVSYANGGTARHRNTL 418 >UniRef50_B6Q7Y5 DNA-directed polymerase kappa, putative n=2 Tax=Leotiomyceta RepID=B6Q7Y5_PENMQ Length = 647 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 83/367 (22%), Positives = 142/367 (38%), Gaps = 21/367 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AF+A+ E + RP+L P+ V G + N A+ G + G F K Sbjct: 116 IVVHVDCDAFFAAVEELDRPELKHLPMAVG---KGVLTTCNYVARKFGCRSGMAGFVAKK 172 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 L ++C NYE Y + + + E P E SIDEA+ ++T N D + Sbjct: 173 LCPD--LICIPQNYEKYTAKAEEIRAIFVEYDPCFESASIDEAYLNITAYCDENDMDPQE 230 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +++R+ + T +TV GIA LAK+A++ K + E + Sbjct: 231 AVQQMRSRIADETKITVSAGIAANTKLAKIASNQNKPNGQFYIPS----EREAIMAFVKD 286 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV V GIGR ++L A+GI+T + R ++ G +++ Sbjct: 287 LPVRKVNGIGRVFERELRAIGIETCGQIYPHRASLKRLFGEKAFHFLMQCHLGLGRTKIQ 346 Query: 239 E-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F E I+D ++R + A A L R + IK F Sbjct: 347 PAVDYERKSVGTESTFSE-ISDPDAIRAKLRWAADELARDLSRTQFKGRTLVLKIKLHTF 405 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGV 355 + + V + D+ + L + + R + G+ S Sbjct: 406 EV------YTRQVAPPKAVWLADDLYTYSLPILAKLQKEIPNMRLRLLGLRCTHLVSTKK 459 Query: 356 AQLNLFD 362 A L+ F Sbjct: 460 AGLDFFG 466 >UniRef50_Q5Q9H0 Polymerase kappa isoform 9 n=3 Tax=Murinae RepID=Q5Q9H0_MOUSE Length = 467 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 71/338 (21%), Positives = 125/338 (36%), Gaps = 19/338 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P+L KP+ V S + + N A+ GV+ P F K L Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGSMS--MLATSNYHARRFGVRAAMPGFIAKRL 159 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + ++ N++ Y +S V L E P S+DEA+ ++T ++ ++ D+ Sbjct: 160 CPQ--LIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNIT--QHLQERQDWPE 215 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 + + + + +GIA LAK+ + K + L + + LP+ Sbjct: 216 D-KRRYFIKMGNYLKIGIAPNTMLAKVCSDKNKPNGQYQ----ILPSRSAVMDFIKDLPI 270 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 V GIG+ K L A+GI T +L + G L Sbjct: 271 RKVSGIGKVTEKMLMALGIVTCTELYQQRALLSLLFSETSWHYFLHIALGLGSTDLA-RD 329 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++ + R+F E I+ A A L+ E R ++ +K F + Sbjct: 330 GERKSMSVERTFSE-ISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVNFEVK- 387 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 + + + + +I A L G Sbjct: 388 -----TRASTVPAAISTAEEIFAIAKELLRTEVNVGSP 420 >UniRef50_UPI0000D862D7 hypothetical protein CIMG_01093 n=1 Tax=Coccidioides immitis RS RepID=UPI0000D862D7 Length = 1021 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 60/352 (17%), Positives = 120/352 (34%), Gaps = 39/352 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+L KPV + + + N A+A G++ G Sbjct: 350 ILHVDFDSFFAAVSIRKNPELADKPVAIAHGTGAGSEIASCNYPARAFGIQNGMWMQGAL 409 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-- 117 + + ++ Y D S + + ++ V+ SIDEA D+T + + Sbjct: 410 QMCPD--LKVLPYDFAAYEDASRKFYEAILDIDGIVQSVSIDEALVDITKLCLEAGGSEG 467 Query: 118 ----------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + + +R +V Q+T V VGI AKLA AK + Sbjct: 468 KGISEGSIWKEQAKADEIAQTLRDSVKQKTGCDVSVGIGGNILQAKLALRKAKPAGQFQ- 526 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NV 220 E + + L V + G+ + KL+ +G+K V D+ + + + Sbjct: 527 -----LKPEVVLEFIGELTVQQLPGVAYSLGAKLEELGVKFVKDIRELSRERLTSNLGPK 581 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG + + ++ + ++G R + + + S +L Sbjct: 582 TGAKLWDYARGIDNADVGDV-APRKSVSAEINWGIRFVTQAQVEEFVQSLCDELHRRLME 640 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDII 323 + ++ I + + SV L T S ++ Sbjct: 641 NGVKGKQLTMRIMRRALDAPLGPPKHLGHGKCDMFNKSVLLGVATNSSEVLV 692 >UniRef50_B9LT67 UMUC domain protein DNA-repair protein n=3 Tax=Halobacteriaceae RepID=B9LT67_HALLT Length = 476 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 85/417 (20%), Positives = 151/417 (36%), Gaps = 54/417 (12%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-----CVIARNAEAKALGVKMGDPW 55 + D++ FYASCE + RP+L +P+VV + V + EA+A GV+ P Sbjct: 20 IVFHVDMDCFYASCERLRRPELADEPLVVGMGYEAGEAIGAVATASYEARAFGVESAMPI 79 Query: 56 FKQKDLFRRC---------------GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSI 100 + DL R + + Y ++++ V + L + + + S+ Sbjct: 80 SEALDLLPRRVNADPDDPDAPDPDEAGRYLPVDLDFYKEVASDVKTVLRDCADVLREVSV 139 Query: 101 DEAFCDLTGVRNC----------------RDLTDFGREIRATVLQRTHLTVGVGIAQTKT 144 DEA+ D+T + R I+ + + + VG+A + Sbjct: 140 DEAYLDVTDRTAWDAAGGESTATGPAETRTLAEGYARHIKERIEREAGVPASVGVAPNMS 199 Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVL 204 AK+A+ A K + + +++LP ++ G+G + L +GI+T Sbjct: 200 TAKIASDADKPDG------LVVVPPGEVESFLASLPTAEIHGVGPVTERTLAELGIETAG 253 Query: 205 DLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 DLA D + R RG+ ++ + + S D R Sbjct: 254 DLAAADPDRLADELGDRGRELYRRARGDDDREVTPTGLP-KSLSRESSLS-ATADEERKR 311 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 + + + AA A + R R I P+ +N + + L P D + + Sbjct: 312 ETVRALAADVARRARERGCLYRTIGIKAVEPPYEVN------TRARSLPGPVDDPDLVES 365 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL--FDDNAPRPGSEQLMTVMDT 379 A L AG R +K GV + Q L FD + G+ + D Sbjct: 366 VALDLLGEF--AGDRVRKLGVRVSKLDFAESDQATLGGFDASGGGRGTAGGDSGADR 420 >UniRef50_B4MLB6 GK17515 n=1 Tax=Drosophila willistoni RepID=B4MLB6_DROWI Length = 1022 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 70/441 (15%), Positives = 146/441 (33%), Gaps = 74/441 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S P+L G+PV V + G Sbjct: 275 VMHIDMDCFFVSVGLRLHPELRGQPVAVTHSKGGNAATDVPVHPQADRQAEQELFAQRFE 334 Query: 37 ------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+A G++ G + +L + Sbjct: 335 HLLHDNIRADKVRTGFEKKMSLSEIASCSYEARAKGIRNGMFVGRALELCPELKTI--PY 392 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQR 130 +++ Y +++N + T+ + + +E S DE F +LT + + D+ +F +R V + Sbjct: 393 DFDGYREVANALYDTVAQYTLNIEAVSCDEMFVELTDLVSELQVDVMEFVGHLREEVRSK 452 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T G+ K L+++A AK G L+ M+ ++ + G+G Sbjct: 453 TGCPCSAGVGANKLLSRMATKEAKPN-----GQFLLNPDGDILSYMAPTALESLPGVGSS 507 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPTKQEIIC 249 IS KL G+ D+ + + + + + RG L + ++ + Sbjct: 508 ISHKLKQAGLNNCGDVQKISVEQLETVLGKKMAQTLHQNCRGIDPRPLA-YEQQRKSLSA 566 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALN 300 ++G R T + + + +L+ + + I+ + TS F + Sbjct: 567 EVNYGIRFTKTSECEKFLRQLSIEVHTRLKEVKRTTKSITLKLMVRAAEAPIETSKFMGH 626 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN- 359 + S L T T D I + L + + G+ L + Sbjct: 627 GVCDVWTKSALLRTGTADVNIITDQVLSLLKQSNLPSNELRGVGIHLNKLEDPTEMKGEN 686 Query: 360 ----LFDDNAPRPGSEQLMTV 376 +F + + Q + Sbjct: 687 VLKQMFSKISEKKKDNQAEKL 707 >UniRef50_C6WX69 DNA-directed DNA polymerase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WX69_METML Length = 409 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 89/408 (21%), Positives = 162/408 (39%), Gaps = 25/408 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D N+++AS E P+L GKP+ V + C IA + EAKA G+K G + + Sbjct: 6 LYVDFNSYFASVEQQLVPELRGKPIGVLAVMAETTCCIAASYEAKAFGIKTGTLVSEARK 65 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L ++ + +Y + ++ +E + ++ SIDE C LTG + D Sbjct: 66 LCPD--IIFVEARPPVYVQYHHFLIDIVESCTHVEKVLSIDEMVCKLTGSQQQPDNALKL 123 Query: 120 GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +I++ + ++ + +GIA LAK+A++ K L + + Sbjct: 124 AAKIKSVLAEKAGSFIRCSIGIAPNTYLAKVASNMQKPDG------CVLIVFNELPQRLY 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQ 236 L + D+ GIG+++ +L+ I TV L + + ++ + +V ER +LRG Sbjct: 178 GLKLRDLNGIGKQMEARLNRYKITTVEQLYAANRQQLQVAWGSVEGERMYDKLRGIEPYY 237 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 ++ + S + +R + +A ++RS IS +K Sbjct: 238 VKNARS---SLGHSHVMPPEQRNEVGVRAVLHRLLQKACMRMRSYDLLASRISVKVKFRN 294 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + S PT ++ +I A + GV + Sbjct: 295 KPSWQKESALS-------PTDNTLRLIEALEAFMQHYPVTDAEPYAVGVSFSGLVTADEV 347 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 +LF AP +L +D+LN+K G+ T+YF G + R Sbjct: 348 ARDLF-QVAPLENERKLNQAIDSLNSKFGKNTIYFGGAHEALKDAPMR 394 >UniRef50_C1F7T1 ImpB/MucB/SamB family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7T1_ACIC5 Length = 441 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 103/419 (24%), Positives = 172/419 (41%), Gaps = 27/419 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+N+++AS E RP+L +P+ V+ C IA + EAKA GV+ G + + Sbjct: 24 WLFLDLNSYFASVEQQLRPELRNRPIAVVPVKAETTCAIAASYEAKAYGVRTGTQVAEAR 83 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 L G+V + +E Y D R++ +E+ P + SIDE C L G R D Sbjct: 84 RLCP--GIVFVEARHEAYVDYHKRIVEAVEQCVPVAAVCSIDEMACRLLGREQPLRHALD 141 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 RE++ ++ +R L VG+A + L+K+A+ K + + + Sbjct: 142 LAREVKGSIRRRVGETLRCSVGLAPNRYLSKVASDMDKPDG------LVALTPDILDTAL 195 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCL 235 L D+ G+G R+ K+L GI T+ +L D +R+ + +V E+ LRGE Sbjct: 196 RRLVPRDLPGVGARMEKRLHEAGIHTMDELLALDRDGMRRAWGSVNGEKLWHWLRGED-- 253 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + I S + +AA +LR+ + +S +K + Sbjct: 254 FHDAELEHNKSISQSHVLPPELRSVEGAYAVAHKLLHKAAMRLRTARLWTTHVSLTLKFA 313 Query: 296 PFALNEPYYGNSASVKLLTP-------TQDSRDIINAATRSLDAIWQAGHRYQK---AGV 345 S +L QD++ ++ A R L + G +QK GV Sbjct: 314 VPKSEAHRKHYSGIPQLGWAQGTTVIECQDNQTLVE-ALRKLWELRPTGPAHQKPFFVGV 372 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 LG+ + L+LF L T +D +N K G TL A + + R Sbjct: 373 WLGNLVPDHLHTLSLFSSLETEARRTSLTTTIDRVNLKYGLDTLAPASMLLAKAAAPTR 431 >UniRef50_D2VFM3 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VFM3_NAEGR Length = 888 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 65/363 (17%), Positives = 135/363 (37%), Gaps = 23/363 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D++ F+AS P L KP+ V + DG + + N A+ GV+ G + + Sbjct: 271 VVHIDMDCFFASIAMRDNPSLKNKPIAVSYSTDGTGDISSANYCARDFGVRAGMWMKQAR 330 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC---RDL 116 +L ++ +E Y + ++++ L RV+I SIDEAF ++T +L Sbjct: 331 ELCPD--LIVVPYEFEKYNEAASKIDEILNSHCERVKIISIDEAFIEITNELKNNTVEEL 388 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + +IR + + T T G++ + LA++A AK + + + + Sbjct: 389 NELVSKIRNEIERETKCTASAGMSTNQLLARIATKKAKPNGQFY------LDAKEAVSFI 442 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCL 235 L ++++ +G + K + M I L +++ E LRG Sbjct: 443 ENLNIEEIPSVGWKTKKFFNQMSITKCSQLLSYSKTELKELVGEKKGETLYNFLRGIDKR 502 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + ++ + ++G R T + + I + +L++E+ + I +K Sbjct: 503 PFFD-DTGRKSVGVEVNYGIRFTKMAQVSEFIDKLSIEVTSRLKNENVKGKAIVLKVKKR 561 Query: 296 --------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + + S S + T DS I + + + + + Sbjct: 562 KDEAPEAKKYLGHGICDNFSKSCTVPYFTDDSDLISRKVKDLYNQLSIEAEDLRGIAIQI 621 Query: 348 GDF 350 Sbjct: 622 QKL 624 >UniRef50_A4QFK8 DNA polymerase IV n=28 Tax=Actinomycetales RepID=DPO4_CORGB Length = 467 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 88/370 (23%), Positives = 150/370 (40%), Gaps = 21/370 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKP-VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ASCE + RP L G+P +V + G V + EA+ G + P + K Sbjct: 5 VLHIDMDAFFASCEQLTRPTLRGRPVLVGGVSGRGVVAGASYEARKFGARSAMPMHQAKA 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 G V + + +Y+ S RV +E+ + VE SIDE F + + ++ Sbjct: 65 RV-GFGAVVVTPRHIVYSAASRRVFQIVEKRAGIVERLSIDEGFMEPEALVGATPEEVKQ 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + E+RA + + T L VG K +AK+ + AK V + +++Q L+ Sbjct: 124 WAEELRAEIKEVTGLPSSVGAGSGKQIAKIGSGEAKPDG------VFVVPVDKQHDLLDP 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 LPV +WG+G KL +MG++T+ DLA + + RG + Sbjct: 178 LPVGALWGVGPVTGSKLASMGVETIGDLAALTQKEVEISLGATIGISLWNLARGIDDRPV 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E ++I ++ + + + AI A A +L + + R +S ++ + F Sbjct: 238 EPR-AEAKQISQEHTYEKDLLTRQQVDAAIIRSAEGAHRRLLKDGRGARTVSVKLRMADF 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S S L T D + A R L + GV Q Sbjct: 297 RIE------SRSYTLSYATDDYATLEATAFR-LARYPGEVGPIRLVGVSFSGLE--ESRQ 347 Query: 358 LNLFDDNAPR 367 LF + + Sbjct: 348 DILFPELDQQ 357 >UniRef50_B7CAT7 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7CAT7_9FIRM Length = 419 Score = 248 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 82/418 (19%), Positives = 146/418 (34%), Gaps = 22/418 (5%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E V + D + +VV +A K LGV F+ Sbjct: 5 YLCIDLKSFYASVECVEQGLDPFEVNLVVADPTRGGGAITLAATPAIKKLGVSSRGRIFE 64 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR- 114 + + LY + S RV E + +YSIDE+F D+T Sbjct: 65 ID---PKIEYMITPPRMHLYMEYSCRVYKIFLEFIAKEDIHVYSIDESFLDITNYLKLYQ 121 Query: 115 -DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + + ++I + ++T L VGI LAK+A + K + L+ ++ Sbjct: 122 VNAKELAKKILDRIYEKTGLIATVGIGTNLYLAKIAMDISAKHNADR--IACLNEDLYRQ 179 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 L P+ D W +G ++L +GI + DL I + K F V E + G+ Sbjct: 180 TLWHHTPMTDFWMLGNGTERRLHKLGIYDMYDLCQFPIEILYKEFGVNAEYIIDHAWGKE 239 Query: 234 CL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 ++ + + I S+ E Y + + + L +H + IS Sbjct: 240 PTTIQDIKNYKSKQHSISNSQILFED-YSYKNAFVVMKEMVDQNVLTLTEKHLVTKQISL 298 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 I S + S K+ T ++ R I + ++ + D Sbjct: 299 MIGYSKDCIKPSCG----SCKITNCTNSYSILLEEFKRLYIRIVNPNYPIRQIAISFQDV 354 Query: 351 FS-QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 +LF D ++L + + + G+ + + KR L Sbjct: 355 KDEYYYENYDLFTDVEKVEREKKLQETLVQIKHRYGKNAILKGMNALDFATAKKRNTL 412 >UniRef50_D1HMR5 Whole genome shotgun sequence of line PN40024, scaffold_91.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HMR5_VITVI Length = 704 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 143/358 (39%), Gaps = 19/358 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++AFYA+ ET+ P L G+P+ V + + N EA+ GV+ P F + Sbjct: 106 IWLHVDMDAFYAAVETLDNPSLRGRPMAVGGMS--MISTANYEARKFGVRAAMPGFIARK 163 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--D 118 L ++ ++++ Y S+ ++ P S+DEA+ D+T V N RDLT + Sbjct: 164 LCPE--LIFVPTDFKKYTYYSDLTRKVFQKYDPNFMAASLDEAYLDITEVCNERDLTSGE 221 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+R +V + T LT G+A + LAK+ + K + + +S+ Sbjct: 222 IAEELRTSVHEVTGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPSNRM----AVMTFISS 277 Query: 179 LPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LP+ + GIG+ L GI T ++ + + G Sbjct: 278 LPIRKIGGIGKVTEHILSGVFGINTCEEMLQKGGFLCALFSRSSADFFLSVGLGLGKTD- 336 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ I R+F D + Q + + + ++ E R ++ +KT+ F Sbjct: 337 TPQVRFRKSISNERTFS-ATDDTALLYQKLAELSEMLSIDMQKEGLSGRTLTLKLKTASF 395 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + S +V + DI+N A + L+A R + + G Sbjct: 396 EVR------SRAVTMQKYICSREDILNHALKLLNAELPLSLRLIGLRISHFNEDKDGH 447 >UniRef50_D1BHR1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=3 Tax=Actinomycetales RepID=D1BHR1_SANKS Length = 489 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 96/365 (26%), Positives = 159/365 (43%), Gaps = 19/365 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQKD 60 A D +AF+AS E RP L G+PV+V V+A + EA+A G + P + + Sbjct: 7 IAHLDADAFFASVEQHQRPSLRGRPVLVGGVGPRGVVATASYEARAYGARSAMPMEQARR 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTDF 119 + VV ++ Y+ S ++M L E+S +VE SIDEAF +L + + DL Sbjct: 67 MCPTATVVV--PRFDAYSAYSAQIMEVLREVSEQVEAISIDEAFAELDHLPGSSADLEAL 124 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 E R +RT L+V +G+ ++K +AKLA+ AAK G V + + + + AL Sbjct: 125 ALEFRRRAHERTGLSVSLGLGRSKLVAKLASEAAKP------GGVKVVDPADEDAFLLAL 178 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 PV +WG+G + +LD +G++TV DL + + R RG + Sbjct: 179 PVRALWGVGPVSAARLDQLGVRTVEDLRAQPMDTLVMATGEAAGTNLYRIARGWDDRPVT 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ +F + + ++ A+ A +L R + ++ + F Sbjct: 239 TV-RERKSAGAEHTFDDDLHGRRAIAAALDGVTDSALRRLDRHGVAARTVVVKVRVASFT 297 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + SV L PT D + AA R+LD + + + GV + L Sbjct: 298 ------TITRSVTLSRPTSDVDALREAARRALD-LAEVVEPVRLLGVSFHGLSAHSQLML 350 Query: 359 NLFDD 363 L D Sbjct: 351 PLGGD 355 >UniRef50_Q3II35 DNA polymerase IV n=3 Tax=Alteromonadales RepID=DPO4_PSEHT Length = 351 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 70/365 (19%), Positives = 141/365 (38%), Gaps = 22/365 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 F D++ FYA+ E P L P+ + + G + N A+ GV+ + K Sbjct: 4 FIHIDMDCFYAAVEMRDNPKLANVPLAIGGNSRRGVLSTANYIAREYGVRSAMSNYHAKQ 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDF 119 L +V +Y D+S ++ + + +E S+DEA+ D+T C T Sbjct: 64 LCPD--LVIVPGRMAVYKDVSTQIRAVFSRYTDLIEPLSLDEAYLDVTHSEQCKGSATLI 121 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++IRA + T LT GIA K +AK+A+ K + + ++ ++ L Sbjct: 122 AQQIRADIYNATGLTASAGIAPIKFIAKIASDENKPNGQF------VVLPDQVDAFLAQL 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G+ +KL+ G+ T D+ + ++++H ++ GE ++ Sbjct: 176 PLGKIPGVGKVTLEKLNLKGLYTGQDVRKKGVNWMQQHVGNFGVSLYQKCAGEHIGRVST 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR--FISTFIKTSPF 297 ++ + ++ + + S +L + + +S +K + F Sbjct: 236 E-RVRKSLSVEHTYEYNKNSLQECLEQLPSLLEELTTRLNKQQLQNQVNKLSVKVKFANF 294 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S +S ++ Q R GV + + Q Q Sbjct: 295 VVT--------SADQAHQQLNSDIFSELLAKAYQRGLQQPVRLLGIGVGIKN-QPQHNLQ 345 Query: 358 LNLFD 362 L++ D Sbjct: 346 LSILD 350 >UniRef50_Q2HFL9 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2HFL9_CHAGB Length = 1141 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 78/416 (18%), Positives = 142/416 (34%), Gaps = 47/416 (11%) Query: 2 FALCDVNAFYASCETVFR-PDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 D ++F+ + PD KP VV + + + N A+ GVK G + Sbjct: 313 IMHVDFDSFFCAVSLNRHAPDHRDKPTVVAHSTGSGSEIASCNYPARKFGVKNGMWMKRA 372 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG--------- 109 ++L+ + ++ Y + S + ++ V+ SIDEA D+T Sbjct: 373 QELYPD--IKVVPYDFPAYEEASKLFYDAILDVGGVVQSVSIDEALVDITDIILSAAGSS 430 Query: 110 ---------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 + + +RA + ++T V VGI LAK+A AK + Sbjct: 431 GVGISEGSIWQEQEKADEIATNLRAEIKRKTDCHVSVGIGGNILLAKVALRKAKPAGQYQ 490 Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-N 219 E +++ L V+D+ G+ I KL+ + +K V DL T + Sbjct: 491 ------VRPEEVLDILAPLKVEDLPGVAYSIGGKLEEIDVKFVSDLRQTSKERLVSILGP 544 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 E+ RG ++ E P ++ + ++G R + + + +L Sbjct: 545 KTGEKLWEYARGIDRAEVGEQ-PIRKSVSADVNWGIRFVSQAEAEEFVHNLCKELERRLL 603 Query: 280 SEHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 +E + ++ I + + + SV T DS I + L Sbjct: 604 NEGVKGKNLTMKIMRRALDTPLDPAKHLGHGKCDTFTKSVTFGVATNDSGVIAKESVAIL 663 Query: 331 DAIWQAGHRYQKAGVMLGDFFS------QGVAQLNL-FDDNAPRPGSEQLMTVMDT 379 + + + GV + +Q L F AP Q V D Sbjct: 664 RSYKFSPGDLRGLGVQMTKLEPIKPSSVPEGSQKKLNFSAAAPPTKRPQTEPVHDE 719 >UniRef50_C1A9Y5 DNA polymerase IV n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Y5_GEMAT Length = 441 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 83/425 (19%), Positives = 156/425 (36%), Gaps = 42/425 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKP--VVVLS--NNDGCVIARNAEAKALGVKMGDPWFK 57 L D +AF+ + P+ GK ++V + G V + + E +A GV+ P + Sbjct: 12 ILLVDADAFFVAVARQEDPEGAGKATLLIVGGRPGSRGVVCSASYECRAYGVRSAMPISR 71 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-- 115 L + V + + S + + L + +P V+ SIDE +CDL G Sbjct: 72 ALKLCPQAMCVPVPRH--VCGTRSREIQAVLAQFAPVVQPSSIDEWYCDLGGTEALYGHE 129 Query: 116 -LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 L + R +R V T L V +G ++ +AK+A AK V + + Sbjct: 130 PLEETARRMREAVFAATGLRVSIGGGTSRLVAKMAVEVAKPKPGTGATGVRCVPPGTEAE 189 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEP 233 +S + D+ +G R + KL+ MG++T+ + + + R +RG+ Sbjct: 190 FLSRFKLADLPMVGPRFATKLERMGLETIAQAQQWTEDTLVHRLGDRAGQWLSRRIRGQD 249 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + +++ +FG + + + + + A R + LR + R I+ ++ Sbjct: 250 ESIVRPRDRQ-KQVSRETTFGRNLHEDDVVERELLRLAVRVSADLRRQALRARTITVKLR 308 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDF-- 350 F SA L + ++ AA L + + + G+ L F Sbjct: 309 DGDFR------TRSAQRTLSGFIESEHSVVRAAKPLLRQMRKTRRAPVRLLGIALSHFED 362 Query: 351 --FSQGVAQLNLF--------------------DDNAPRPGSEQLMTVMDTLNAKEGRGT 388 + QL LF D+ P L+ +D + + G Sbjct: 363 DEEPRPAVQLGLFPSAFKGPGASPPDADGSALSDEPTETPRDRALVQALDRIRGRFGADA 422 Query: 389 LYFAG 393 + A Sbjct: 423 IIPAR 427 >UniRef50_B0R4P0 DNA polymerase IV n=7 Tax=Halobacteriaceae RepID=DPO4_HALS3 Length = 411 Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats. Identities = 85/373 (22%), Positives = 136/373 (36%), Gaps = 28/373 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-----CVIARNAEAKALGVKMGDPW 55 + D++ FYASCE P L G PVVV + V + EA+ GV+ Sbjct: 17 IVVHVDMDCFYASCERRREPALRGAPVVVGMGYEPDQTVGAVATASYEAREYGVESAQAI 76 Query: 56 FKQKDLFRR--------CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 + R + Y +S V L L V SIDEA+ D+ Sbjct: 77 SAALERLPRKADAPDASAAGYYRPVDMAYYESVSESVSEILHGLGDPVREVSIDEAYLDV 136 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 T FGR I+ + + + VGIA + AKLA+ K + + Sbjct: 137 TDRTAWDVAAGFGRHIKQRIARSVGVPASVGIAPDMSTAKLASDHEKPDG------LVVV 190 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 E + ++ L V D+ G+G ++ L GI+TV +LAD D + F R Sbjct: 191 PPESVQSFLAPLDVADLHGVGPVHARALRERGIETVGELADADPYVLEAAFGERGREFHR 250 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 RG +E + + SF + +R+ + + A++ + R Sbjct: 251 RARGADSRPVEPRGKP-KSLSRESSFDGATESFDRVREQAAALSGAVADRASRTNASYRT 309 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 I + T P+ + + + L P D + + LD G +K GV + Sbjct: 310 IGVKVVTPPYDV------QTRAESLPGPVDDPALLEAVSQSLLDEF--EGAAVRKVGVRV 361 Query: 348 GDFFSQGVAQLNL 360 + Q L Sbjct: 362 SNLVFSEREQATL 374 >UniRef50_Q29DW0 GA11465 n=3 Tax=Drosophila RepID=Q29DW0_DROPS Length = 954 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 69/436 (15%), Positives = 139/436 (31%), Gaps = 74/436 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S P+ G P+ V + G Sbjct: 273 IMHIDMDCFFVSVGLRSHPEWRGLPIAVTHSKGGNAATDVPVHPQADRQAELKLFAERFE 332 Query: 37 ------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+A G++ G + L + Sbjct: 333 HQLHDNIRADKVRSGFDKKMSLSEIASCSYEARAKGIRNGMFVGQALKLCPELKTI--PY 390 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQR 130 ++E Y +++ + T+ + + +E S DE F DLT + D+ F +R V + Sbjct: 391 DFEGYKEVAFALYDTVAQYTLNIEAVSCDEMFVDLTDLVEDLQVDVMSFVAHLREEVRNK 450 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T G+ K LA++A AK + G M+ ++ + G+G Sbjct: 451 TGCPCSAGVGTNKLLARMATKRAKPDGQYLLGPGT-----DVLGYMAPTALETLPGVGSS 505 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE-RTVRELRGEPCLQLEEFAPTKQEIIC 249 + KL+ G++ D+ T ++ + L RG L + ++ + Sbjct: 506 LRHKLEQAGLRNCADVQRTSLQTLESVVGKKLALTLYENCRGIDTRPLV-YEQKRKTVSA 564 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALN 300 ++G R T+ + +A +L + + I + S F + Sbjct: 565 EVNYGIRFTNTTECETFLRQLSAEVTTRLTDIKRKAKSIGLKVMVRAAEAPIEASKFMGH 624 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN- 359 + S L T D I + R + H + G+ L + + Sbjct: 625 GVCDTINKSFILTHATDDVNVITSHVLRLMKESGLPPHELRGIGIHLSKLSEATEVKKDN 684 Query: 360 ----LFDDNAPRPGSE 371 +F+ + + E Sbjct: 685 VLLQMFEKMSEKRKGE 700 >UniRef50_Q7Q6B2 AGAP005939-PA n=2 Tax=Culicidae RepID=Q7Q6B2_ANOGA Length = 1055 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 67/436 (15%), Positives = 133/436 (30%), Gaps = 77/436 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S P L G PV V + Sbjct: 290 IMHIDMDCFFVSVGLRKYPHLRGLPVAVTHSRGSEARVPSHPGQNRALEIELYHKRLEER 349 Query: 37 -----------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 + + + EA+ GVK G L + + Sbjct: 350 YKAPDIPIESRLAAIDEHNSLSEIASCSYEARQCGVKNGMFVGAALKLCPELKTI--PYD 407 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL--TDFGREIRATVLQRT 131 ++ Y ++++++ T+ + +E S DE F DLT + + +F +R + T Sbjct: 408 FDGYREVAHQLYDTIARYTLDIEAVSCDEMFVDLTELLQSTGVGVMEFVTYVRNEISTAT 467 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 GI + A++A AK + + M +P+ ++ G+G Sbjct: 468 GCDCSAGIGANRLQARMATKRAKPNGQYHLV------PGAVEEYMKVIPIAELPGVGPST 521 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICS 250 S +L M T DL ++ F E RG L + ++ + Sbjct: 522 SHRLRKMTYVTCADLQTIPKNVLQTEFGKKFGETLYNACRGIDERPLV-YDRGRKSVSVD 580 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF---------IKTSPFALNE 301 ++G R + + + + +L Q + ++ ++T+ F + Sbjct: 581 VNYGIRFSTEQEVERFMRQLTQEIHRRLVELRQRGKLVTVKLLVRSPEAPVETAKFMGHG 640 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF--------SQ 353 + S L T D I A + + A + G+ + F Sbjct: 641 LCDVVTKSQPLRQHTDDRGMIEGAVLGLMRMLAIAPSELRGIGIQISKFEGTKHAANSEA 700 Query: 354 GVAQLNLFDDNAPRPG 369 G ++F + Sbjct: 701 GNRLKSMFQKVEDKRK 716 >UniRef50_C3WGR0 DNA polymerase IV n=6 Tax=Fusobacterium RepID=C3WGR0_9FUSO Length = 352 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 74/361 (20%), Positives = 147/361 (40%), Gaps = 19/361 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFYAS E P L KP+VV N V + EA+ G+ K Sbjct: 4 IIMHYDMDAFYASIEINRNPKLKNKPLVVGEN---IVTTASYEARKYGIHSAMKVSDAKL 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + ++ + + Y +SN + + + +++ +VE + DE + DLTG+ + F Sbjct: 61 LCPK--LIAIPVDKKEYIRISNEIHNLILKITNKVEFIATDEGYIDLTGIVKPENKKQFA 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + + + T+LT VGI K AK+A+ K + N + + +S Sbjct: 119 LKFKERIKELTNLTCSVGIGFNKLSAKIASDINKPFGIYIFE-----NEKDFVEYISDKK 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEE 239 + + G+G++ + L I V D+ + ++ K + E +RG ++ E Sbjct: 174 IKIIPGVGKKFFEILKHDKIFLVKDVFKYSLDYLVKKYGKSRGENLYCSVRGINHDEV-E 232 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I ++ + + + S ++L + + + ++ I+ S F Sbjct: 233 YEREIHSIGNEETYSIPLQTNSELEREFNSLFEYTYQRLLKNNVFSQSVTVKIRYSSF-- 290 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S KL T+D + N L++ + G+ GD + QL+ Sbjct: 291 ----KTYTKSKKLKFATKDKDFLYNEMLELLNSFELEDE-IRLLGIYFGDIKRNTLIQLS 345 Query: 360 L 360 + Sbjct: 346 I 346 >UniRef50_D2R017 DNA-directed DNA polymerase n=2 Tax=Planctomycetaceae RepID=D2R017_9PLAN Length = 398 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 108/396 (27%), Positives = 166/396 (41%), Gaps = 22/396 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D + FY S E V L KPV VL N CVIA++ E K GVK G+P ++ Sbjct: 2 LIAHLDADCFYVSAERVRDRFLADKPVGVLGNQGACVIAKSYEMKKAGVKTGEPIWEALT 61 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + ++ Y +S ++ + E SP+VE YSIDE F + + F Sbjct: 62 KCPDG--IYVKRDFRWYEVLSRAMLDVVREFSPQVEYYSIDEFFLSVD-----QSPASFA 114 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 E++ +L R + V +G+A+T+TLAKL + AK + G + L E + +L+++ P Sbjct: 115 HELQQAILDRVGVPVTIGVARTRTLAKLVSDLAKPF-----GALALIGREAEEQLLASRP 169 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 DV GI R + KL + GI T LDLA D +R V ER ELRGE C+ ++ Sbjct: 170 ASDVTGIAERSAAKLRSFGIVTCLDLARADPTQVRSVLTVTGERLCYELRGEKCVPIQSK 229 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P + + S G +D R E L S ++ + + Sbjct: 230 RPLHKIVSRGGSIGAPSSDPAIQWAWCVRNLERLIEALESYGLCAGKLAFAV---DYKHG 286 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 ++ L PT ++ AA + G + + G QL L Sbjct: 287 PTCAADTR---LTFPTTRFDMLVEAARHLWKQVQMQGLLLYRMHYFASELQYPGPRQLGL 343 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 F+ L + +N++ GR L A Sbjct: 344 FEPTIRDG----LHALKSEINSRHGRFALRSAATLP 375 >UniRef50_C7DHN7 DNA-directed DNA polymerase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHN7_9EURY Length = 350 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 73/366 (19%), Positives = 137/366 (37%), Gaps = 23/366 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-----DGCVIARNAEAKALGVKMGDPW 55 + D++ F+A+CE P+L G+P+ V +++ G V N EA+ G++ G P Sbjct: 3 LVIYIDMDYFFAACEEKRHPELKGRPLAVGTSDSADKLRGVVQTCNYEARKYGIRSGMPT 62 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 K L++ + ++ Y ++SN +M L L +E SIDEA D+ + Sbjct: 63 LKAFQLYKD--LQYVKADDAYYEEVSNAIMEYLSSLGFPLEKMSIDEAAIDVGDLG-YGK 119 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + I+ + QR L +GI+ K AK+A AK T V L + Sbjct: 120 ANELAERIKEEIKQRLGLPCTIGISIGKVFAKMACDKAKPDGLLTLDEVHLH------EF 173 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + + V + G+G + +KL AMG+K++ D+ + D + F G Sbjct: 174 LKSTDVKKLPGVGSKSYEKLSAMGVKSIADIRNIDPLRLVDEFGSFGRELYALAGGIDES 233 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ I R+ + + + +L + ++ Sbjct: 234 KVVSEERVL-SISRERTLRGLEDQQKEIDSMLEVLSKEVIAELNKRKMEFGGVGVKVRYV 292 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F+ L + + + A + + +A +K GV + Sbjct: 293 DFSEKV------RDRSLSYYSNSYDVLYSNAVSMIRELSRANK-VRKIGVKAYRLGNMSG 345 Query: 356 AQLNLF 361 + LF Sbjct: 346 QKK-LF 350 >UniRef50_A9A3A9 DNA polymerase IV n=6 Tax=Thaumarchaeota RepID=DPO4_NITMS Length = 364 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 72/368 (19%), Positives = 146/368 (39%), Gaps = 23/368 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D + FYA CE + P+L KPV V + G + N A+ G K G P Sbjct: 5 IVFHIDFDYFYAQCEEIRSPELKSKPVCVCVFSDRGGDSGAIATANYTARKYGAKSGIPI 64 Query: 56 FKQKDLFRRC-GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-- 112 K V +++ Y++MS + M +EE S E DEA+ D+T Sbjct: 65 VFAKKRLEERKDAVFLPVDFDYYSEMSEKAMKIMEEFSDVFEYVGRDEAYLDVTKRTEGD 124 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + ++I+ ++ ++T L+ +GI+ K ++K+A+ K + + + E+ Sbjct: 125 FHKASHLAQQIKNSIREKTKLSCSIGISPNKLISKIASDFQKPDG------LTIVSPEKV 178 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRG 231 + +L + D+ GIG++ ++ M ++T+ D+ D+ + K F +RG Sbjct: 179 EGFLESLKIRDIPGIGKKTEQRFTEMNLETIGDVKRLDVFTLNKEFGRKSGTYIYNAVRG 238 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 ++E P+ Q + + DY + + E ++ ++Q + + Sbjct: 239 IDDELVKEREPSIQ-HGKIVTLKKDSKDYEFLLENTLELCKEVHEIIQKKNQMFKSVGIS 297 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA-IWQAGHRYQKAGVMLGDF 350 S + + S L PT ++ + L + ++ GV + + Sbjct: 298 FVQSDLSNK------TKSKMLRNPTMSLEELEKTVEQLLREALENQTATIRRLGVKVSEL 351 Query: 351 FSQGVAQL 358 + Sbjct: 352 SESQGQRD 359 >UniRef50_A9BNM1 DNA-directed DNA polymerase n=34 Tax=Betaproteobacteria RepID=A9BNM1_DELAS Length = 437 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 74/404 (18%), Positives = 132/404 (32%), Gaps = 53/404 (13%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN----------------------------- 32 A D++AFYAS E + P L G PVV+ Sbjct: 30 IAHLDMDAFYASVELLRYPQLKGLPVVIGGGRRAHDEALDARYAGRLHEIPVDEFSRLKD 89 Query: 33 --NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEE 90 G + A+ GV K L + + ++ S + Sbjct: 90 YVGRGVITTATYPARQFGVGSAMGMMKAARLCPQA--ILLPVDFAEVRRFSRMFKEIIVS 147 Query: 91 LSPRVEIYSIDEAFCDLTGVR--NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 ++P +E +DE + D T V R I+ T+ T LT +G+A K LAK+ Sbjct: 148 IAPLMEDRGVDEVYIDFTDVPGGQREGGRVLARLIQKTITDATGLTCSIGVAPNKLLAKM 207 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLAD 208 A+ K + + + ++ L + GIG + KL ++GI+T+ +LA Sbjct: 208 ASEFNKPNGIS------IVQPDDLQAVIWPLACRKINGIGPKADAKLQSLGIQTIGELAK 261 Query: 209 TDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI---TDYPSMR 264 + + + F G + + + +F + D + Sbjct: 262 QSLPQLVQWFGRAYGNWLHGVSWGRDERPVVTHSEPV-SMSRETTFERDLHAVRDRAELS 320 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 R A+ L+ + R + ++ F + L P D+ + Sbjct: 321 AIFTDLCERLAQDLQRKGYMGRTVGIKLRYDDF------KTATRDHTLELPMADAATLRR 374 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 AA + L + R + GV +G+ + D A Sbjct: 375 AAGQCLKRV-PLAKRLRLLGVRVGNLVRTADWEATAHDPLAREQ 417 >UniRef50_B6Q3Z2 DNA damage repair protein Mus42, putative n=5 Tax=Eurotiomycetidae RepID=B6Q3Z2_PENMQ Length = 1167 Score = 245 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 64/402 (15%), Positives = 130/402 (32%), Gaps = 40/402 (9%) Query: 2 FALCDVNAFYASCET-VFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQ 58 D ++F+A+ P+L KPV + + + + N A+A G+K G Sbjct: 368 ILHVDFDSFFAAVSINKHHPELVDKPVAIAHGTGSGSEIASCNYPARAFGLKNGMWMKGA 427 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT- 117 D + ++ Y + S + + + V+ SIDEA D+T + Sbjct: 428 LDRCPE--LKVLPYDFPAYEEASRQFYDCILAVDGVVQSVSIDEALIDVTMQCLQAGGSD 485 Query: 118 -----------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 + +R + ++T + VG+ AK+A AK + Sbjct: 486 GRGISEGSIYREQAKADEIATSLRHAIKKKTGCAISVGVGGNILQAKVALRKAKPAGQYQ 545 Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-N 219 + + L V D+ G+ + KL+ +G+K V D+ D + H Sbjct: 546 ------LKPDEVLDFIGNLTVQDLPGVAYSLGGKLEEIGVKFVKDMRDLTRERLVSHLGP 599 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 + RG ++ ++ + ++G R T+ + + S + +L Sbjct: 600 KTGAKLYDYARGIDKAEVG-VQTMRKSVSAEINWGIRFTNQTQAEEFVQSLSEELHRRLV 658 Query: 280 SEHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 + ++ + + + SV L T S I A L Sbjct: 659 ENLVKGKQLTIRVMRRSADAPLEPVKHLGHGKCDIFNKSVLLGIATNASDIISKEAIAML 718 Query: 331 DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 + + GV + A + + + + Sbjct: 719 RSFGFTPGDLRGLGVQMTKLEPVKSATGGRLESSQQQLNFKA 760 >UniRef50_A4RF27 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4RF27_MAGGR Length = 1201 Score = 245 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 72/381 (18%), Positives = 133/381 (34%), Gaps = 39/381 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+ KP VV N + + N A+ GVK G + Sbjct: 386 IMHVDFDSFFCAVSLKTAPEYIDKPAVVAHGNGTGSEIASCNYPAREFGVKNGMWMKRAL 445 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV--------- 110 +L + ++ Y D S + E+ V+ S+DEA D+T + Sbjct: 446 ELCP--TIKVLPYDFPAYEDASRLFYGAILEIGGIVQSVSVDEALIDITTLVLEASSSSG 503 Query: 111 ---------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + ++RA + +RT V +G+ +AK+A AK + Sbjct: 504 VGVDEGSVWREQEKANELAADLRAEIKRRTGCNVSIGMGPNILMAKVALRKAKPAGQYQ- 562 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NV 220 E ++S L V+D+ G+ I KL+ +G++ V D+ + + Sbjct: 563 -----VKPEEILDILSGLKVEDLPGVAYSIKNKLEEVGVRLVKDVRELSRGRLTTILGPK 617 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 ER RG ++ + P ++ + ++G R P + + + ++L S Sbjct: 618 TGERLWEYSRGIDKAEVGDQ-PMRKSVSAEVNWGIRFVSQPEAEEFVMNLCKELEKRLLS 676 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 E + + I + + SV T + I A L Sbjct: 677 EGVKGKGFTMKIMRRSLDSPLDPPKHLGHGKCDVFNKSVAFGIATYSADFIGKEAVSILR 736 Query: 332 AIWQAGHRYQKAGVMLGDFFS 352 + A + GV L Sbjct: 737 SYNFAPGDLRGLGVHLSRLEP 757 >UniRef50_B0D2Y9 Predicted protein n=3 Tax=Agaricales RepID=B0D2Y9_LACBS Length = 1152 Score = 244 bits (622), Expect = 5e-63, Method: Composition-based stats. Identities = 79/406 (19%), Positives = 139/406 (34%), Gaps = 44/406 (10%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA--------RNAEAKALGVKMG 52 + CD + F+ S V RP+ GKPVVV + A + EA+ G+K G Sbjct: 382 VIMHCDFDCFFVSAGLVSRPEHKGKPVVVCHSQGTQGGASSTSEIASSSYEARKFGIKNG 441 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + + L G++ +E Y S + L + ++ S+DEA D+T Sbjct: 442 MSLQQARKLCP--GIITIPYEFERYKQFSLLFYTVLMSHADDLQAVSVDEALIDVTSTVT 499 Query: 113 CRD------------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 DF IRA + + T + +GI+ LA+LA AK Sbjct: 500 QLRSHVGLEGSPHDPAKDFAETIRAQIRKATSCEISIGISHNILLARLATRRAKPGGSFH 559 Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFN 219 ++ L + D+ G GR +K + +G+ T+ +LA + Sbjct: 560 LV------PLDVPDFLAPLDIADLHGFGRSTKQKAQEKLGVTTLGELAKKSKGVLIDALG 613 Query: 220 V-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 E +RG +L E ++ + C ++G R + + AA ++L Sbjct: 614 KATGETLYDAVRGIDDKKL-ESDKPRKSVSCEINYGIRFENNEQAEAFVHQMAAEVKKRL 672 Query: 279 RSEHQYCRFISTFIKTSP---------FALNEPYYGNSASVKLLTP----TQDSRDIINA 325 + R I+ + F + + + L+ P T D + I Sbjct: 673 DAIDMVGRSITMKVMKRDPTAPVEPPKFLGHGSCDLFNKQIPLIGPGGRATSDEQIIGEH 732 Query: 326 ATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 A R L + + G+ + S + Sbjct: 733 AWRLLKSFNFDPKELRGLGIQVQKLESASSTAHAPPGQAMLPFKRK 778 >UniRef50_A9UNE7 GH11153p (Fragment) n=8 Tax=Drosophila RepID=A9UNE7_DROME Length = 1012 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 74/438 (16%), Positives = 144/438 (32%), Gaps = 74/438 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S RP+L G P+ V + G Sbjct: 292 VMHIDMDCFFVSVGLRTRPELRGLPIAVTHSKGGNAATDVPVHPQADRKAELELFAQRFE 351 Query: 37 ------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+ G++ G + L + Sbjct: 352 HHFHDGDKAEKVRSGFDKKMSLSEIASCSYEAREKGIRNGMFVGQALKLCPELKTI--PY 409 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQR 130 ++E Y +++ + T+ + + +E S DE F +LT + + D+ F +R V + Sbjct: 410 DFEGYKEVAFTLYDTVAQYTLNIEAVSCDEMFVELTDLAHELNVDVMAFVSHLRQEVYSK 469 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T G+A K LA++A AK G L + M+ + +D + G+G Sbjct: 470 TGCPCSAGVAGNKLLARMATKEAKPN-----GQFLLDSSNDILAYMAPMSLDLLPGVGSS 524 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIIC 249 IS KL G+ D+ +T + + K + + RG L + ++ + Sbjct: 525 ISHKLKQAGLNNCGDVQNTTLEKMEKVLGKKLGQNLFQNCRGIDDRPLA-YEQIRKTVSA 583 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALN 300 +FG R T+ Q +C + ++L + R I+ I TS + + Sbjct: 584 EMNFGIRFTNSVECEQFLCQLSEEVTKRLVEIRRKARSINLKIMVRAAEAPVETSKYMGH 643 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ--- 357 + S + T D I + + G+ L + Sbjct: 644 GVCDIINKSSLIKYATDDVNVITTVVLDLMKDADIPPDELRGLGIHLTRLEDANEVRKEN 703 Query: 358 --LNLFDDNAPRPGSEQL 373 +F + + + Sbjct: 704 NIKEMFGKMSEMRKDKPI 721 >UniRef50_A5IXL3 DNA damage repair protein MucB n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXL3_MYCAP Length = 415 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 76/406 (18%), Positives = 163/406 (40%), Gaps = 21/406 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQK 59 + D ++++ S L KPV V + + + + E K G+K+G P F + Sbjct: 6 IIFHIDFDSYFVSAHRSKDHRLKNKPVAVSNGLSRSICSSISYELKNAGIKVGWPRFMIE 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMS-TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD 118 + N++LY SN + + +E+ SIDE + D+T + ++ Sbjct: 66 KKAPE--TIFVEPNFDLYYTTSNNIFDYIASNYTANIEVGSIDECWVDVTAIAEGKNPVA 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R+++ + + + + +GI+ +K AK+A+ AK + GV + N + Sbjct: 124 LARKLQEDINEIFDIPISIGISYSKWAAKIASDLAKPF-----GVKFIENHNDLETQIWP 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI--RFIRKHFNVVLERTVRELRGEPCLQ 236 L + +GIG + + KL +KT+ LA + + F L + E G + Sbjct: 179 LNIQKYYGIGEKTADKLIKADVKTIGQLARSSELNSDLYMIFRNRLSAFINEANGNGNDK 238 Query: 237 LEEFAPTKQEIICSRSFG-ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 L + I +F + + + I + A + + + ++ + ++ I++ Sbjct: 239 LTYEHNNLKGIGNELTFPLYDFYERSEIYKVIKNIAYKVSHRAQNRNVVGFTLTVIIRSV 298 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF--FSQ 353 +KL+ PT D+ I A + +W+ + G+ L + + Sbjct: 299 S------KVWKGKQMKLVEPTNDAEQIYKNAIILFEKLWKE-QPIRGVGLRLTNLINEFE 351 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 QL +FD ++ +++ +N K G+ L + +++ Sbjct: 352 HFKQLTIFDTYDDYKQESKVNNIINDINKKVGKVVLKTGYRVSKEK 397 >UniRef50_Q4KWZ7 REV1 protein n=9 Tax=Euteleostomi RepID=Q4KWZ7_CHICK Length = 1255 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 57/330 (17%), Positives = 117/330 (35%), Gaps = 21/330 (6%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + + + EA+ G+K G + + K L + S ++ Y +++ V L + +E Sbjct: 519 IASCSYEARQAGIKNGMFFGQAKKLCP--NLQAVSYDFNAYKEVAQTVYEILASYTHNIE 576 Query: 97 IYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DEA D+T + + IR + +T T VG+ LA++A AK Sbjct: 577 AVSCDEALVDITEILTETRLTPDELANAIRDEIKAQTKCTASVGMGSNILLARMATRKAK 636 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + E + V ++ G+GR + KL ++GI+T DL + + Sbjct: 637 PDGQYH------LKPEEVDDFIRGQLVTNLPGVGRSMESKLASLGIRTCGDLQCASMSKL 690 Query: 215 RKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 +K F + R RG + ++ + ++G R T + S + Sbjct: 691 QKEFGPKTGQMLYRFCRGLDDRPVRTEK-ERKSVSAEINYGIRFTQPKEAEAFLLSLSEE 749 Query: 274 AAEKLRSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 +L + + ++ I + + + + +V L T ++ I Sbjct: 750 IQRRLEAAGMKGKRLTLKIMVRKAGAPVEPAKYGGHGICDNIARTVTLDHATDSAKVIGK 809 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + G+ + Sbjct: 810 ETLNMFHTMKLNISDMRGVGIQVQQLVPIS 839 >UniRef50_A6C5Y5 UMUC-like DNA-repair protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C5Y5_9PLAN Length = 405 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 109/394 (27%), Positives = 163/394 (41%), Gaps = 22/394 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D + FY SCE + L G P VL N CVIA++ E KA GVK G P ++ K Sbjct: 5 LIGHIDSDCFYVSCERIRSYSLRGVPCGVLGNQGACVIAKSYELKAYGVKTGHPIWEAKK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTD 118 L V ++ Y +S R++ L+ +SP VE YSIDE F D + ++ L Sbjct: 65 LCPHA--VFVKRDFRWYEVISRRLLDLLKTVSPLVEYYSIDEMFFDASELQRYFRLPLEA 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R ++ V + + V +GIA +++LAKL + AAK + Q + + + Sbjct: 123 ATRALQTLVQEEIGVPVSIGIAPSRSLAKLGSDAAKPFGIQVI-------ERDCERFLRS 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 PV ++ GIG R +KL I T D D IR + E ELRG+ ++ Sbjct: 176 QPVGELCGIGSRSERKLRDRNIHTCWDYRQADRLLIRNLLTIKGEALWWELRGDAVNPIQ 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 P + I S G + D +R R E L Y R IS I Sbjct: 236 TTRPPHKAIARGGSCGGKTMDADRIRAWAVRNIERLIEALDHHRVYARHISLQI-----D 290 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 N+ + L P+ R I +A L H ++ + + Q Sbjct: 291 ANKTALWLGRT-PLAVPSASFRMIYDAVMPMLAT-APTTHPVSHMHIIAENLTWRDRIQK 348 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 +LF ++A P L + +N K GR + A Sbjct: 349 SLFFEDAQSP----LDQIKRDINQKLGRFAIRSA 378 >UniRef50_C1XFZ1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XFZ1_MEIRU Length = 419 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 160/410 (39%), Gaps = 27/410 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAF+AS E RP+L GKPV V+ C IA + EAK G+K G + Sbjct: 16 YLFLDMNAFFASVEQQLRPELRGKPVAVVPMLAETTCCIATSYEAKRYGIKTGTLVQDAR 75 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 L + + Y + ++++ ++ + P + SIDE C L G + Sbjct: 76 LLCPGLEL--VEARPREYIRVHHQILQAVDSVLPVEAVLSIDELVCKLMGREREPENALQ 133 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 GR+++ + +R L VG+ + LAK+A K + L + Sbjct: 134 LGRQVKEAIYRRVGGQLRCSVGLGPNRFLAKVAAEMHKPDG------LTLLQPSDLPHRL 187 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF--NVVLERTVRELRGEPC 234 +L + D+ GIG + ++L G+ TV L + + + V LRG Sbjct: 188 YSLQLRDLPGIGPGMERRLFKHGVTTVEGLYRLSALQLAQVWGSRVHGLAWWHRLRGAD- 246 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 L E ++ + S + R + RAA +LR E + ++ F++ Sbjct: 247 --LPETPTRRRSLGHSHVLPPALRSEAGARAVLTRLVHRAAARLRHEGYWAGSLALFLRF 304 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + P+QD+ ++ + L G + K G+ LG Sbjct: 305 LDGGEQRKWEAQIR----IQPSQDTLTLLRVSL-GLWQQKPEGTPF-KVGIALGHLTPAL 358 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 LF+ +L MD N+K G LYFAG +Q + R Sbjct: 359 ELSEPLFESEQ---KLVRLAQAMDKANSKYGPQALYFAGMHRTEQSAVTR 405 >UniRef50_D1Y4D1 DNA polymerase IV n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4D1_9BACT Length = 412 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 75/389 (19%), Positives = 133/389 (34%), Gaps = 22/389 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYA+ E P L G+P+++ + G V + EA+ GV + Sbjct: 5 VIHVDMDAFYAAVEIRDNPALKGRPLIIGALPDERGVVATCSYEARKFGVHSAMNIKEAY 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 R + N E Y S+R+ + E ++DE + D+T Sbjct: 65 RRCPRG--IFMHPNREKYRQASDRLHGIWSSYADVAEYVALDEGYLDVTRSALRFGGARR 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R I+ T LT VG+ +KT AKLA+ K G ++ L+ Sbjct: 123 VARLIKERTRAETGLTCSVGVGYSKTSAKLASEEKKPD-----GYFEILTPRDFIGLIID 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + ++G+G R ++KL GI TV D+ + R G + Sbjct: 178 RDITVLYGVGARTAEKLYHAGIHTVRDVQNNRERLAALLGGKTGRHLAELSLGIDDRPVI 237 Query: 239 EFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + I +F + + + +R I + ++L + R ++ Sbjct: 238 PADEADAKSISREVTFQKDTSHFGYLRDVILLLSLNLGDRLAALGLNGRTVTLKATYWN- 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S +I A + L I ++ + GV L + Q Sbjct: 297 -----MKTITRSHS-GESVDHPYEIYQAGSALLAGIEKS--PVRLIGVGLQNLSETYARQ 348 Query: 358 LNLFDDNAPRPGS--EQLMTVMDTLNAKE 384 L + R E+L + L + Sbjct: 349 LTFDTLDGERERRHAERLRARLLDLQRRY 377 >UniRef50_D1WCN2 Nucleotidyltransferase/DNA polymerase for DNA repair n=4 Tax=Lactobacillus jensenii RepID=D1WCN2_9LACO Length = 443 Score = 241 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 86/420 (20%), Positives = 161/420 (38%), Gaps = 18/420 (4%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNN------DGCVIARNAEAKA-LGVKMG 52 + + D +FYASCE + + + LS+ ++A + AK G+ Sbjct: 18 LIFMIDNKSFYASCECLRLGLNPMTTALAALSHQPDSDEQSSLIMAASPLAKKKYGLTNV 77 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGV 110 +R ++ + LY + S V+ + + + YSIDE+ D+T Sbjct: 78 MRARDLPPKSQREDLLLVEPHMNLYIEKSMEVLDIFRKYAAEEDIHTYSIDESMIDMTES 137 Query: 111 RNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 + GR+I+ + ++ L GI + LAKLA K ++ + Sbjct: 138 WHLFGTDPYLVGRKIQKEIKEKLGLYTTCGIGENPLLAKLAMDIDAK--KRWSMIAFWHY 195 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 ++ + ++DVWGI + +++L +GI + +LA + ++ F ++ E+ Sbjct: 196 IDVPDTIWQIKNLEDVWGINKSTAQRLKKLGINDMNELAHCNPEKLKSEFGIIGEQLFAI 255 Query: 229 LRGEPCLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 G + + P ++ S+ + I A + A ++R Sbjct: 256 SWGVDRSIIRYKYKPKRKSFGNSQILMRDYLGQREIEIVIREIAEQVAARIRKHKLLTSC 315 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 IS I S N+ G +AS K+ T D+ + W G + + Sbjct: 316 ISLHIGFSKLKNNKR-NGINASKKIT-ATNDNIALTTELRSLFRKYWN-GEAVRTISISY 372 Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 D QL+LF D A + + V+D+L K G +L A + ++RA L Sbjct: 373 SDLLPDIEQQLDLFSDPAKQIKRKNFDYVIDSLREKYGPTSLVKASSLLPGATAIRRANL 432 >UniRef50_C4G2M8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2M8_ABIDE Length = 414 Score = 241 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 86/428 (20%), Positives = 167/428 (39%), Gaps = 52/428 (12%) Query: 1 MFALCDVNAFYASCETVFR----PD---LWGKPVVVLSN---NDGCVIARNAEAKALGVK 50 + DVN+ + S V + P+ L P + + G + A + AK GV+ Sbjct: 4 LIFHVDVNSAFLSWTAVKKLKEEPESVDLRTIPSAIGGDVSKRHGVITACSIPAKKQGVR 63 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + + + F S+++ Y + S + + L++ + VE SIDEA+ D+TG Sbjct: 64 TGEPVMRALEKCPE--LQLFPSDFKTYREYSAKFIEILKKYALVVEQVSIDEAYLDMTGT 121 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + +I+A + + TV +GI+ K LAK+A+ K ++ T + Sbjct: 122 D---EPVSMAEKIKAEIYESLGFTVNIGISTVKLLAKMASDFEKPYKVHT------LFPK 172 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVREL 229 ++ M LP++ + G G R S+KL +G+KT+ D A D + + E Sbjct: 173 EIKEKMWKLPIEKLHGCGYRTSEKLRNIGVKTIGDAAALDKKLLCSLLGEKSGEYIHESS 232 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERIT--DYP-SMRQAICSYAARAAEKLRSEHQYCR 286 G + + + I Y M + I + +++L+ + Sbjct: 233 NGRGSDIVSGEREAAKSYSNETTLPYDIRVSTYDKEMPEVIKWLSESVSKRLKKDGAEGY 292 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA-------IWQAGHR 339 IS KTS F S L+ ++++I + + +++ Sbjct: 293 TISVSAKTSSF------KRRSKQTTLVESINNAKEIEKVSISLMKELCFGEKGLFEGDEG 346 Query: 340 YQKAGVMLGDFFSQGVAQLNLFD--------------DNAPRPGSEQLMTVMDTLNAKEG 385 + GV + Q+++F + + ++L T++ +N K G Sbjct: 347 IRLVGVGVSHLAEHECKQMDIFSYMKEKSVQDEIKLKETKIKEKEDKLSTMLKKINEKFG 406 Query: 386 RGTLYFAG 393 G + G Sbjct: 407 EGKIKKGG 414 >UniRef50_C8W7V4 UMUC domain protein DNA-repair protein n=12 Tax=Bacteria RepID=C8W7V4_ATOPD Length = 447 Score = 241 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 95/431 (22%), Positives = 153/431 (35%), Gaps = 33/431 (7%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + + D+ +FYAS E V R D +VV +A + +ALGV F+ Sbjct: 8 YLVIDLKSFYASVECVERGLDPMKAKLVVADLTRTEKTICLAVSPALRALGVPGRCRVFE 67 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRD 115 LY + S V S + + +YSIDEAF D+T + Sbjct: 68 IPK---NLTYEVAPPRMALYIERSADVYSVYLKYIAPEDIHVYSIDEAFIDVTPYLSLYG 124 Query: 116 --LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + G +IRA V + T + G+ LAK+A K G +L + Sbjct: 125 CTARELGEKIRADVAKTTGIPATCGLGPNLYLAKIALDITAKHSPNFFG--ELDEESYKL 182 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 KL + P+ D W IG I K+L+AM I T+ LA I + K F V E + G Sbjct: 183 KLWNHKPLTDFWHIGTGIQKRLEAMNIHTMGQLAMAPIEPLYKEFGVDAEILIDHAWGIE 242 Query: 234 CLQLEEFAPTKQEIICSRSFGERI---TDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + + S S + D R +L ++ C I Sbjct: 243 PTTIADIKN-YKSQSHSVSTAQVFDHNRDTEGARFIFKEMVEALTLELVTQKLVCSSIGI 301 Query: 291 FI-------------KTSPFALNEPY-YGNSASVKLLTPTQDSRDIINAATRSLDAIWQA 336 +I KT + + +S + KL+ PT +++ D Sbjct: 302 YIGYSATESQMEELRKTGDYRSWRRHIPSSSGTKKLIYPTNSRDELMAEVLSFFDERVLP 361 Query: 337 GHRYQKAGVMLGDFFS--QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 + G+ G+ Q +LF D Q ++ + K G+ +L A Sbjct: 362 SESVHRVGLTFGNTQEETNSGIQTSLFQDTYGLEKERQRQDTINAIKKKFGKNSLLKAMD 421 Query: 395 GIQQQWQMKRA 405 + + +R Sbjct: 422 LLSEATARQRN 432 >UniRef50_P63988 DNA polymerase IV 2 n=20 Tax=Corynebacterineae RepID=DPO42_MYCBO Length = 346 Score = 241 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 85/350 (24%), Positives = 141/350 (40%), Gaps = 21/350 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-----DGCVIARNAEAKALGVKMGDPWF 56 D++ F AS E + P+L G PV+V N V + EA+A GV+ G P Sbjct: 9 ILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMPLR 68 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 SN Y S V++ L +L VE++ DEA+ + D Sbjct: 69 TAARRCPEAT--FLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAV-APGTPDDP 125 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + EIR +L +T L+ +GI+ K AK+A AK + +M Sbjct: 126 IEVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQLTDANW------MAIM 179 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 V+ +WG+G + +K+L +GI TV LA TD + F + +G + Sbjct: 180 GDRTVEALWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRTALWLLLAKGGGDTE 239 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + A + + +F +T M A+ A R ++ + + ++ ++T+ Sbjct: 240 VSAQAWVPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTAT 299 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 F Y + KL P+ D I AA LD +++ + GV Sbjct: 300 F------YTRTKIRKLQAPSTDPDVITAAARHVLD-LFELDRPVRLLGVR 342 >UniRef50_A0QHM7 DNA polymerase IV 1 n=8 Tax=Corynebacterineae RepID=A0QHM7_MYCA1 Length = 458 Score = 241 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 99/389 (25%), Positives = 156/389 (40%), Gaps = 21/389 (5%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E + RP L G+PV+V V+A + EA+ G + P + K L Sbjct: 2 LHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQAKRL 61 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTDF 119 V +Y S RV T+ + P VE S DE F + + D+ F Sbjct: 62 V-GVSAVVLPPRGVVYGVASRRVFDTIRAVVPVVEQLSFDEGFGEPAQLAGAPAEDVEAF 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++R V ++T L VG K +AK+A+ AK V + +R+L+ L Sbjct: 121 CEQLRRRVREQTGLIASVGAGSGKQIAKIASGLAKPDG------VRVVRRAEERELLGGL 174 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 PV +WGIG +KL +GI+T+ +LA R RG + Sbjct: 175 PVRRLWGIGPVAEEKLHRLGIETIGELAALTDAEAANILGATIGPALHRLARGIDDRPVA 234 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E ++I +F +T +R+AI A A +L + + R ++ +K S + Sbjct: 235 ER-AEAKQISSESTFAADLTTLEQLREAIEPIAEHAHHRLLRDGRGARTVTVKLKKSDMS 293 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S L T ++ ++ A R L + G + GV V Q Sbjct: 294 ------TLTRSATLPYATTEAAALVGVARRLLLDPREIG-PIRLLGVGFSGLS--EVRQE 344 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRG 387 +LF D +V A G G Sbjct: 345 SLFPDLEMPAPQSDSQSVETAAEAMFGPG 373 >UniRef50_A0D236 Chromosome undetermined scaffold_35, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0D236_PARTE Length = 591 Score = 241 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 86/359 (23%), Positives = 139/359 (38%), Gaps = 20/359 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++A D++ FY +CE + +P+L KPV V V N A+ GV+ P F K Sbjct: 87 IWAHFDMDMFYVACELLDKPELKDKPVAVG---QTIVSTANYVARKFGVRSAMPGFVAKK 143 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLTD 118 L ++ ++E Y +SN M+ L++ +E +DEA DLT N D Sbjct: 144 LCPE--IIFIPCHFEKYKSVSNIFMTILKKYDDNLESMGLDEANLDLTEYINNSQEDPAI 201 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 IR +L T LT G+ K +AKLA+ K V + + Sbjct: 202 LCENIRKDILLATQLTASCGVGPNKMIAKLASEINKPNGLH----VVEQSATAVLNFLEK 257 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + GIG + L + T D+ D E G Sbjct: 258 LPIRKIPGIGNITEQILSGLNFNTCKDVRDRADELYVIFTPKTFEYIFYSCWGVARNYHV 317 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 EF I C R+F I+ + A + AE+++SE + ++ IKTS F Sbjct: 318 EFEDQ-HSISCQRTFSS-ISTQREFEDKVDYIAEKLAEEMQSEEKVGNHLTLIIKTSKFE 375 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S S++L T ++ I + L + + G+ + ++ Q Sbjct: 376 IR------SKSLQLNQYTNQAKQIAIYGKQLLKIMQLD-EPIRLLGLKMSSLANEKQIQ 427 >UniRef50_Q041Q9 Nucleotidyltransferase/DNA polymerase for DNA repair n=13 Tax=Lactobacillus RepID=Q041Q9_LACGA Length = 439 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 82/422 (19%), Positives = 162/422 (38%), Gaps = 19/422 (4%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG------CVIARNAEAKA-LGVKMG 52 + + D +F+ASCE + + + V+S ++A + AK G+ Sbjct: 11 LIFMIDNKSFFASCEALRLGLNPMETCLAVVSRQPDSCWGSGLIMAASPLAKKKYGLHNV 70 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGV 110 + ++ + + LY S +V+ + + + +YSIDE D+T Sbjct: 71 MRVRQLPPKWKAPDLKLVEPHMNLYIKRSVQVLDIFRKYAANEDIHMYSIDEGMIDMTDS 130 Query: 111 RNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 R+I+ + L GI + LAKLA + K ++ Sbjct: 131 WKLFGNGPYYVARKIQKDIHDALGLYTTCGIGENPLLAKLAMDNSAKHKKSML--AFWHY 188 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 L+ + ++DVWGI R + +L +GI + DLA + ++K F ++ E+ + E Sbjct: 189 LDVPDTIWKIEKLEDVWGINTRTANRLRKIGINNMYDLAHSSPYLLKKEFGIIGEQLLAE 248 Query: 229 LRGEPCLQL-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 G + +++ P + S+ + + I + A ++R+ + Sbjct: 249 SWGVDRSIIRQKYHPKSKSYGNSQVLTRDYFNQREIELVIREIGEQVAARIRAHNLRAGK 308 Query: 288 ISTFIKTSPFALNEPYYG--NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 +S +I S F L E K+ PT + D++ W + V Sbjct: 309 VSLYIGFSLFQLTETTKRGGFGVQRKIT-PTNVNHDLVKELIALFRENWHR-ESVRTISV 366 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 D G QLN+ +D + +L ++D + + G +L A ++ ++R+ Sbjct: 367 SYTDLSPDGTQQLNMLEDFDLQIKRYKLDHIVDKIRKEHGFTSLVKASSLLKGATAIERS 426 Query: 406 ML 407 L Sbjct: 427 NL 428 >UniRef50_C4LI62 DNA polymerase IV n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LI62_CORK4 Length = 512 Score = 240 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 83/371 (22%), Positives = 146/371 (39%), Gaps = 21/371 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKP-VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ASCE + RP L G+P +V + G V + EA+ GV P + + Sbjct: 27 VLHIDMDAFFASCEQLTRPTLRGRPVLVGGVSGRGVVAGASYEARVFGVHSAMPMMRARR 86 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 L G+ +++Y S RVM L E + +E S+DEAF + + + Sbjct: 87 LVGYAGITVRP-RFDVYKTASRRVMEILREEAGLIEQLSVDEAFMEPDELSGATPDGVRK 145 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + +R + + T L VG K AK+ + AK + ++ Q ++ Sbjct: 146 WAGHLRKRIREETGLPSSVGAGAGKQFAKIGSGLAKPDGTF------VIPVQDQHAILDP 199 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 LPV +WGIG KL +G++T+ A + +G + Sbjct: 200 LPVRKLWGIGPVAEAKLADIGVRTIEQFARMSRTDVEMALGKTNGPALWLLAQGHDPRPV 259 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 +++ +F + +T + + I + +A +L ++ + R ++ +K + F Sbjct: 260 APR-AEAKQVSSESTFSDDVTTLDGVDEGIRAALTKAHRRLMNDGRGARTVTVKLKRADF 318 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + + S L T D + A+R G + GV L S Q Sbjct: 319 ERH------TRSETLPFSTTDWDVLYRVASRLAADPAVFG-AVRLVGVSLSGLES--ARQ 369 Query: 358 LNLFDDNAPRP 368 LF D P Sbjct: 370 EALFPDLDPSQ 380 >UniRef50_C9AAQ9 DNA directed DNA polymerase n=4 Tax=Enterococcus RepID=C9AAQ9_ENTCA Length = 464 Score = 240 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 92/426 (21%), Positives = 165/426 (38%), Gaps = 30/426 (7%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG----CVIARNAEAKA-LGVKMGDPW 55 DV +FYAS E + R D +VV+S++D V+A + +AK+ LG+ Sbjct: 14 ILFIDVKSFYASVECISRGLDPIQAMLVVMSHSDNTGNGLVLAASPKAKSVLGISN---V 70 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNC 113 + +L + S Y + +V + + + +YSIDE DLT + Sbjct: 71 TRNDNLPTHPDLYKASPRMSFYIKENTKVNNVFRKYVGQDDLLLYSIDETMMDLTRTLDL 130 Query: 114 RDLTD----------FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV 163 ++I+ + + T L V +GI LAKLA K + Sbjct: 131 FIPDKTISREEKRWLIAQQIQKDIYETTKLYVTIGIGDNPLLAKLALDNESKHN--RSLI 188 Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 + + + K+ P+ + WGIGRR K+L MGI+T+ LA +R ++ E Sbjct: 189 AEWTYDDVPTKVWQIAPMTEFWGIGRRTEKRLHLMGIETIEQLAHASPDLLRSRMGIIGE 248 Query: 224 RTVRELRGEPCLQLEEFAPT--KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 + G L E P ++ S+ + I A + A ++R Sbjct: 249 QLYHHAHGIDRTILSEPTPQVMEKSYGNSQVLHRNYYLQEEIEIVIKEMAEQVAARIRRH 308 Query: 282 HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQ 341 H I+ +I + G S +K+ PT ++R ++ + G + Sbjct: 309 HCQTACINVYIGVAFGETAS---GFSRQMKIP-PTDNTRKLVAHCLFLFRKFY-TGQVVR 363 Query: 342 KAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 G+ QL+LF+ + +L ++D + K G ++ A ++ Sbjct: 364 HIGITYSKLVYTENVQLDLFEQAEAQLRQRKLDLIIDKIREKYGFTSIVHATSRMEGARA 423 Query: 402 MKRAML 407 + R+ L Sbjct: 424 IARSKL 429 >UniRef50_A1SN18 DNA-directed DNA polymerase n=13 Tax=Actinomycetales RepID=A1SN18_NOCSJ Length = 362 Score = 240 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 93/365 (25%), Positives = 141/365 (38%), Gaps = 26/365 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN----DGCVIARNAEAKALGVKMGDPWFK 57 D++ F A+ E + RP+L G+PVVV G V + EA+A GV G P Sbjct: 10 VLHVDLDQFIAAVEVLRRPELAGRPVVVGGRGDPTERGVVATASYEARAFGVGSGMPLRV 69 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL----SPRV-EIYSIDEAFCDLT-GVR 111 V + E Y S +VM+TL L P V E+ DEAF Sbjct: 70 AARKCPDA--VFLPVDKEAYDAASAQVMTTLRGLEWGGVPVVLEVLGWDEAFLAAGEDHG 127 Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + +F +RA VL T L VGI K AK+A K D Sbjct: 128 ELGNPREFAEHLRAEVLAETRLHCSVGIGDNKLRAKIATDFGKPRGVWQLTEADWFP--- 184 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELR 230 +M P +WGIG R +KKL A+GI TV LA +D R + R R Sbjct: 185 ---VMGERPTTALWGIGARTAKKLSALGIDTVEQLARSDARVLAAELGPTMGPWFHRLGR 241 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G ++ + ++ E + D+ + + + + R + + E + + Sbjct: 242 GVDTSPVDATPWVPRAHGREETYQEDLEDWDRVTEEVRALTRRVVDDIDREGRPAARVGI 301 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 ++ PF+ S S+ L P+ D + +AA L+ + + G + GV L Sbjct: 302 KVRYRPFS------TVSRSLTLPEPSNDPAVLEDAAVSLLERVER-GRPVRLLGVRLEMV 354 Query: 351 FSQGV 355 Sbjct: 355 DPPEG 359 >UniRef50_Q03R40 Nucleotidyltransferase/DNA polymerase for DNA repair n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R40_LACBA Length = 371 Score = 240 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 71/371 (19%), Positives = 140/371 (37%), Gaps = 21/371 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-----NNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYAS E P P+++ G V N A+ LGV Sbjct: 11 IIHVDMDAFYASIEERDHPAFKQHPLIIAQDPRKTGGRGVVATANYAARQLGVHSAMNAN 70 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRD 115 + L + + N+ LY +S+++ E + ++E + DEA+ D+T + Sbjct: 71 EALKLAPQA--IFQPPNFPLYRQISDQIHEIFHEYTDKIEPVAFDEAYLDVTENKHHLHS 128 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 EI+ + ++THLT GI+ +K LAK A+ K V + E Sbjct: 129 AVQVAHEIQVEIFEKTHLTCSTGISYSKFLAKEASDFRKPVG------VSVILPEDAHDF 182 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + ALP++ G+G++ K+ +G + + V L E Sbjct: 183 LMALPIERFRGVGKKTVPKMHELGNSYLEPTCIIGQSWPSFMSLVNLAMFCISGSEELTS 242 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + ++ I R++G +T + + A A ++ + ++ + + ++TS Sbjct: 243 GRLPYQRERKSIGKERTYGPPLTTLGEVENQLQRLAEMVAATVQEKQRHGKTLVLKLRTS 302 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF--FSQ 353 F Y + D++ + A ++ + + G+ + + Sbjct: 303 AFKTLTKRYT---QADFIA--NDAQTYYDLALDLYQSVAGENEQVRLLGITITGLAAQTF 357 Query: 354 GVAQLNLFDDN 364 +L LFD + Sbjct: 358 ENVRLPLFDSD 368 >UniRef50_UPI0001B7B957 DinB1 protein n=3 Tax=Euteleostomi RepID=UPI0001B7B957 Length = 793 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 72/383 (18%), Positives = 129/383 (33%), Gaps = 45/383 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P+L KP+ V S + + N A+ GV+ P F K L Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKEKPIAVGSMS--MLATSNYHARRFGVRAAMPGFIAKRL 159 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + ++ N++ Y +S V L E P S+DEA+ ++T ++ ++ + Sbjct: 160 CPQ--LIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNIT--QHLQERQGWPE 215 Query: 122 EIRATVLQRTHLTVGVG----------------------IAQTKTLAKLANHAAKKWQRQ 159 + + + +G IA LAK+ + K + Sbjct: 216 D-KRRYFIKMGNCRKIGILTLAMTTGNFHLLRLAQPQGCIAPNTMLAKVCSDKNKPNGQY 274 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 + + + LP+ V GIG+ K L A+GI T +L Sbjct: 275 Q----IVPSRSAVMDFIKDLPIRKVSGIGKVTEKMLLALGIVTCTELYQQRALLSLLFSE 330 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 + G L ++ + R+F E I A L+ Sbjct: 331 SSWHYFLHVALGLGSTDLA-RDGERKSMSVERTFSE-INKTEEQYSLCQELCTELAHDLQ 388 Query: 280 SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW----Q 335 E R ++ +K F + + + + + + DI A L Sbjct: 389 KEGLKGRTVTIKLKNVDFEVK------TRASTVPSAISTAEDIFAVAKELLRTEVTAGSP 442 Query: 336 AGHRYQKAGVMLGDFFSQGVAQL 358 R + GV + F + + Sbjct: 443 QPLRLRLMGVRMSTFSNDDDRKH 465 >UniRef50_C1XR91 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Bacteria RepID=C1XR91_9DEIN Length = 396 Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 98/400 (24%), Positives = 156/400 (39%), Gaps = 30/400 (7%) Query: 7 VNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 +NA++AS E RP+L GKPV V+ C IA + EAK GVK G + L Sbjct: 1 MNAYFASVEQQMRPELRGKPVGVVPVMAESTCCIAVSYEAKRYGVKTGTRVADARLLCPH 60 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFGREI 123 + + +LY + ++ ++ + P + SIDE C L GV + Sbjct: 61 --IAIVEARPQLYIQVHREILKAIDTVLPIQAVLSIDEVVCKLIGVERKPHQAIRLAEAV 118 Query: 124 RATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 + + + L VG+ K LAK+A+ K + L + + + L + Sbjct: 119 KQAIKTQVGPYLRCSVGLGPNKLLAKVASDMKKPDG------LTLLEPQTLPQALFGLRL 172 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV--LERTVRELRGEPCLQLEE 239 D GIG R+ + + GI TV +L + + + R LRGE L E Sbjct: 173 CDFPGIGPRMEARFHSFGITTVEELYQLSPHQLSRIWGSSQIGTSWWRRLRGED---LPE 229 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I SR + + + + +AA +LR E+ + I F+ Sbjct: 230 APTRRHSISHSRVLPPQERNDERAKAVLMRLVYKAAARLRHENYWTGSIRVFVAY----- 284 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 +L + QD+ +I AT L G K GV+LG+ Sbjct: 285 -LGRPLWHEECRLPSC-QDTLTLIR-ATDRLWKHKPLGTPL-KVGVILGNLEPDPSISWP 340 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 LF + +L +D N K G +LYFAG + + Sbjct: 341 LFSE---DQKLIRLSQAIDQANRKFGAYSLYFAGMDMGKP 377 >UniRef50_C4M8P4 Deoxycytidyl transferase, putative n=2 Tax=Entamoeba RepID=C4M8P4_ENTHI Length = 708 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 66/366 (18%), Positives = 140/366 (38%), Gaps = 23/366 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQKD 60 D+++F+AS +L GKPVVV + V + N EA+ G+K G + + Sbjct: 172 IMHVDIDSFFASVTISKHTELQGKPVVVSHGGNNADVSSCNYEARKYGIKNGMWLKQAYN 231 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + ++ +++ Y ++ ++ L + +E+ S DE D++ V D+ F Sbjct: 232 LCPQ--LIVVGYDFDEYEKVALKMYEILTKYFHNIEVLSCDECIIDISSVPEPIDI--FL 287 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +++R + + H + GI A+LA AK + +S + Sbjct: 288 QQVRIEIKETIHCGISFGIGINPLTARLAMKKAKPDGIYYLL-------SNIEEFISTIK 340 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEE 239 + ++ G G +S++ +G+ T D++ + K + + +G Q E Sbjct: 341 IAELPGFGYSLSEQCKIIGVYTCGDISLISKEVLEKQIGEKNTLKLIEMSKGIDNTQF-E 399 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS---- 295 K+ + S ++G R + ++Q I ++L + ++ I T Sbjct: 400 NKKEKKSVGISINWGIRFENDDDVKQFIFRMCCEVEKRLHKSNVMGTLMTMQIMTRKEGS 459 Query: 296 ----PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + + S S+ + TQ+S + +A + + + + Sbjct: 460 GEAIKYKGHGIVNMQSKSITICE-TQNSAILNKSAIILWNQFQIPIKDLRGISIQISKVH 518 Query: 352 SQGVAQ 357 S Q Sbjct: 519 SIQPVQ 524 >UniRef50_B5BUV5 DNA polymerase kappa n=2 Tax=Agaricales RepID=B5BUV5_COPCI Length = 707 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 72/325 (22%), Positives = 132/325 (40%), Gaps = 23/325 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E + P L GKP V G + + EA+ GV+ G F K L Sbjct: 106 IVHVDMDAFYANVEILRDPSLKGKPFAVG---RGVMSTASYEARKYGVRSGMAGFIGKKL 162 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 + ++ ++++LY+ S ++MS P + +DEA+ ++T + + Sbjct: 163 CPQ--LIFVPAHFDLYSKTSAQIMSIFRRYDPTMCPAGVDEAYLNVTAYCKQHGKTVDEV 220 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 E+R V T LTV GIA K LAK+ + K + + + M +L Sbjct: 221 VSEMRKAVFDETQLTVSAGIAPNKMLAKICSDKNKPNGQFKLEF----EPDSIKAFMHSL 276 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTD--IRFIRKHFNVVLERTVRELRGEPCLQL 237 + V G+GR + LD++GI+T D+ I + K F L+ +R G + Sbjct: 277 SIRKVPGVGRVNERLLDSIGIRTCGDIYQQRGVIALMDKRFG--LDFLLRVYLGIASNHV 334 Query: 238 EEF-APTKQEIICSRSFGERITDYPSMRQAICSYAAR-------AAEKLRSEHQYCRFIS 289 ++ I R+F +++ ++ + A+ E ++ E + ++ Sbjct: 335 APHAREERKSIGAERTFSTLDSNHADPKKGSVAIVAKLEEVAEELVEDMKREGWVGKTVT 394 Query: 290 TFIKTSPFALNEPYYGNSASVKLLT 314 K + S + Sbjct: 395 LKYKLDTYQTFTRAKQFSKWITTKE 419 >UniRef50_O94623 DNA repair protein rev1 n=1 Tax=Schizosaccharomyces pombe RepID=REV1_SCHPO Length = 935 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 71/368 (19%), Positives = 125/368 (33%), Gaps = 23/368 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQKDL 61 D + F+AS T F +L KPV V + + N EA+ G+K G K+L Sbjct: 280 LHVDFDCFFASVSTRFSHELRLKPVAVAHGIKNSEIASCNYEARKFGIKNGMYVGTAKNL 339 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTL-EELSPRVEIYSIDEAFCDLTGVR-NCRDLTDF 119 + ++ Y +S + L L +++ SIDEA D+T + +D + Sbjct: 340 CP--SLRVVDYDFGAYESVSREFYTILVNTLHDYIKVISIDEALLDITSSVSSFQDCFEI 397 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IR+ V ++T+ V VGI LA+LA AK + + E ++S L Sbjct: 398 AESIRSQVREKTNCEVSVGIGPNVLLARLALRKAKPHNVYSLSI------ENVFDVLSPL 451 Query: 180 PVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 V D+ G+G ++KL + G++T+ L + +++ F V RG + Sbjct: 452 SVQDLPGVGSSQAQKLFNLYGVRTIGQLQRIEKFNLQETFGVNYGLHLYNISRGID-TDI 510 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF------ 291 ++ I ++G R + ++ I Sbjct: 511 INNETPRRSISVDVNWGVRFVFQEDGIDFLKRLLHELLSRMGKCQVLLHQIQLRILKRAD 570 Query: 292 ---IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + + S + T I T I + G+ Sbjct: 571 GAPFSPPKYLGAGEVTSFTKSSTFTSATNSFDLIWKKVTSMYKTINVDPGDVRGIGLQAL 630 Query: 349 DFFSQGVA 356 Sbjct: 631 KIIKDNSK 638 >UniRef50_Q03AC9 Nucleotidyltransferase/DNA polymerase for DNA repair n=19 Tax=Bacilli RepID=Q03AC9_LACC3 Length = 435 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 92/417 (22%), Positives = 152/417 (36%), Gaps = 16/417 (3%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNN----DGCVIARNAEAKA-LGVKMGDPW 55 L D +FYAS E++ R + +VV+S G ++A + AK G+K Sbjct: 13 VFLIDNKSFYASVESIERGLNPLRTLLVVMSEQENTNGGLILATSPMAKKIYGLKS--NV 70 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNC 113 +Q+DL ++ LY + + E + YSIDE+ DLT Sbjct: 71 SRQRDLPVDKHLIVVPPRMNLYIKKNLAINDIFREFVANEDLWPYSIDESILDLTHTWRL 130 Query: 114 RD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + I+ T+ R L VGI AK+A K G +S Sbjct: 131 FGKTPRAVAQLIQHTIRHRLGLYTTVGIGDNPLQAKIALDVYAKHDPNLIGQ--ISYQTV 188 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + DVW IG+R + L MGI T+ LA + +++ ++ + G Sbjct: 189 PDTIWQITNMTDVWSIGQRTAAHLARMGITTMKQLAHANPYALKQELGIIGTQLFALAWG 248 Query: 232 EPCLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 ++ E + I S+ ++ + I + A +LR H+ IS Sbjct: 249 IDRTKISERVITREPSIGNSQVLPRDYSNQVEIEIVIKEIGEQVAARLRHHHKRAGEISL 308 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 I S + G K + PT D++ W G + V G Sbjct: 309 GIGFSYAESEKDGRGGFHQTKRILPTNRDGDLVATLQLIFRQNWH-GEVIRNVAVYTGRL 367 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QLN F+ + + L +DT+ + G L +A + ++RA L Sbjct: 368 APDTGEQLNFFEPVDQQIKATNLERTLDTIRDRFGFKGLIYAKSAMHGGTAIQRASL 424 >UniRef50_A9NFG9 DNA polymerase IV n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFG9_ACHLI Length = 383 Score = 238 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 87/378 (23%), Positives = 150/378 (39%), Gaps = 25/378 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + D+NAFYA+C + P L + VV + G V + +A+ G+ G Sbjct: 21 VIFHIDLNAFYATCAMIKEPHLKHRVFVVGGQSSQPRGVVSTASYKARKYGIHAGMSMLD 80 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 + F R ++ +++ Y +MSN+ M L+ S V SIDEAF D+T Sbjct: 81 ALNKFPR--LLIVPVDFKFYREMSNKFMEVLDAYSDLVLQASIDEAFLDMTKASEEIHPI 138 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 ++I+ ++ + L +GIA T LAK+A+ K + + KL+ Sbjct: 139 KLAKKIQKELVDKYQLPTSIGIAPTLFLAKMASDMKKPLG------ITVLRKRDVEKLLY 192 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV----RELRGEP 233 L V D++GIG++ KL A+GI T+ D D+ + K V+ E T + G Sbjct: 193 PLSVTDIYGIGKQTYPKLMALGINTIKDF--MDLSNLPKITRVMKEETYYSFREYILGNS 250 Query: 234 CLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 ++ + I +F + + + I S + +L+ + + + + Sbjct: 251 SNVVDPDKYRLPKSISAETTFNTNMDEPSVILDIIMSQLDESLVRLKKYNMLTKTVGFKL 310 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG-HRYQKAGVMLGDFF 351 K+S F + S L T D I T + ++ G +R A + Sbjct: 311 KSSDF------KSITRSKTLEDYTNDPEIIKYELTSLFENEFEGGIYRLAGASLSNLILH 364 Query: 352 SQGVAQLNLFDDNAPRPG 369 S NLF Sbjct: 365 SDNEIPFNLFTYEKFITK 382 >UniRef50_O74944 DNA polymerase kappa n=1 Tax=Schizosaccharomyces pombe RepID=POLK_SCHPO Length = 547 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 79/362 (21%), Positives = 137/362 (37%), Gaps = 25/362 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AFYAS E + P L P+ V + N A+ GV+ P F + Sbjct: 131 IIVHVDCDAFYASIEELKNPKLKSLPMAVG---KSVLCTANYVARKFGVRSAMPEFIARK 187 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC------- 113 + +V N YA S + + L + + SIDE + +LT Sbjct: 188 ICPD--LVVIPLNLSEYAIKSKEIQNVLAQYDSNLCPASIDEFYMNLTSHLRLQELAFTV 245 Query: 114 RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 ++T +IR V + T +TV GIA K LAK+A++ K + + Sbjct: 246 ENITMVVEKIRKQVHEETGVTVSCGIAANKLLAKIASNKRKPNNQF----FIPFDEIGIS 301 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 K M+ LPV +V GIGR + ++L + IKT D+ + + +R G Sbjct: 302 KFMNDLPVREVSGIGRVLEQQLLGLEIKTCGDIQRNLVILSYIFLPKSFQNLLRCSYGFG 361 Query: 234 CLQLEEFAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 L+E+ ++ I +F ++ + + +E L+ I+ Sbjct: 362 TTILDEYGESKRKTIGSEATFSSNLSSPSIIEYKLRLLVQNVSENLQKRGLVTNSIAIKY 421 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 KTS F ++ + + D++ A + L + + GV S Sbjct: 422 KTSEFQVH------TKQKSIGQFIHSESDLLKPALQLLRQSY--PMTIRLLGVRATKLVS 473 Query: 353 QG 354 + Sbjct: 474 KS 475 >UniRef50_Q8REB0 DNA polymerase IV n=8 Tax=Fusobacterium RepID=DPO4_FUSNN Length = 350 Score = 237 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 74/361 (20%), Positives = 143/361 (39%), Gaps = 19/361 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFYAS E P L KP+VV N V + EA+ + K Sbjct: 4 IIMHYDMDAFYASIEINRNPKLKNKPLVVGEN---IVTTASYEARKYDIHSAMKVSDAKL 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + ++ + Y +SN + + + +++ +VE + DE + DLT V + F Sbjct: 61 LCPK--LIVLPVDKTEYIRISNEIHNLILKITNKVEFVATDEGYIDLTDVIKPENKKAFV 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + + + T+LT VGI K AK+A+ K + + K +S Sbjct: 119 IKFKQRIKELTNLTCSVGIGFNKLSAKIASDINKPFGFFIFENEE-----EFIKHISDKK 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEE 239 + + G+G++ + L I V D+ + ++ K + E +RG ++ E Sbjct: 174 IKIIPGVGKKFFEILKNDKIFYVKDIFKYPLDYLVKKYGKSRGENLYCSVRGIDFDEV-E 232 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I +F + + + + S E+L + + + I+ ++ + F Sbjct: 233 YQREIYSIGNEETFLIPLQNNSEIIREFNSLFEYTFERLLKNNVFTQSITIKMRYTSF-- 290 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S KL T+ + N +++ + + GV GD + QL Sbjct: 291 ----KTYTKSKKLKFSTRSKDFLYNEMFELINSFEKEDE-VRLLGVYFGDIKKSNLVQLA 345 Query: 360 L 360 L Sbjct: 346 L 346 >UniRef50_C4FT17 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=C4FT17_9FIRM Length = 423 Score = 237 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 91/415 (21%), Positives = 150/415 (36%), Gaps = 18/415 (4%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAK-ALGVKMGDPWF 56 D +F+AS E V R D + V+S G V+A + K G+ G + Sbjct: 14 ILCIDCKSFFASIECVERGLDPLTAKLCVVSRPHLKGGLVLASSPRMKSEYGIGTGSRVY 73 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCR 114 R +V + LY ++ + + + +YSIDEAF D+ Sbjct: 74 DLPK--RDSDIVLAPARMNLYVQRNHDINQIFLQYVAWEDLHVYSIDEAFLDVGRSHALF 131 Query: 115 DL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 +I+ + +R L VGI LAKL K++ S Sbjct: 132 GSNYQIAWQIQHEIYKRYGLPTCVGIGDNLLLAKLCLDNVAKYRSPYL--AYWSYARIPE 189 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + + D WGIGRR L++MGI +V DLA D+ ++ F V G Sbjct: 190 TVWKIEKLSDFWGIGRRTQTSLESMGIYSVKDLAHADLGKLKARFGVKGAELYYHANGLD 249 Query: 234 CLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + E ++P Q S+ DY + + A A +LR E + + I Sbjct: 250 ASVIREAYSPQSQVYSASQILERNYLDYRQVALVVREMADNLASRLRREGRMTSCLGLGI 309 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + S T S+ ++ + L + + + + + Sbjct: 310 GY----GKDIVPKRSGGQMTFELTSSSKQLMAHSQTLLKRHYFR-LPVKSLHLTVSHLQA 364 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 G QL+LF D E+ V+D + + G G+L A + ++RA L Sbjct: 365 AGSIQLSLFQDPEQSAQEERAERVVDAVRERYGYGSLVRASSLLPGATAIQRADL 419 >UniRef50_A0AM11 Complete genome n=24 Tax=Listeria RepID=A0AM11_LISW6 Length = 418 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 96/417 (23%), Positives = 163/417 (39%), Gaps = 19/417 (4%) Query: 1 MFALC-DVNAFYASCETV-FRPDLWGKPVVVLSNN---DGCVIARNAEAKA-LGVKMGDP 54 + +N F+AS E V R + +VV+SN G V+A + K +K G Sbjct: 5 VIFYVLILNRFFASVECVKRRLNPLDAYLVVMSNAERAGGLVLAATPKMKQDHHIKTGSR 64 Query: 55 WFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLTGVRN 112 ++ ++ +LY ++ + + + P + +YSIDE F D+TG Sbjct: 65 MYELPTW--DKRIIIAPPRMKLYLKVNAMIQAIFKRYVPAEFIHVYSIDECFLDITGSHL 122 Query: 113 CRDL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + R+I+ +L+ L V VGI LAKLA K + G+ + + Sbjct: 123 LFGSTEEIVRKIQRDILEELRLYVTVGIGDNPLLAKLALDNVAKNRD--DGIAEWRYADV 180 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + +DDV GIGRR +L MGI + L+ T ++K V+ E+ G Sbjct: 181 PETIWKIRHLDDVCGIGRRTVVRLQKMGIFNMYQLSQTPPPVLKKAMGVIGEQLYYHAHG 240 Query: 232 EPCLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 L E + P + S+ + I A +LR H I Sbjct: 241 IDYSLLNEKYVPVSKSYGKSQILERDYHASAEVEIVIREMVEEVAMRLRQNHVDTAVIHL 300 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 I S +++ + G S K+ + T S +I + + + + G Sbjct: 301 SIGYSKYSIKK---GFSHQAKIPS-TSSSHALIPYFLQLFRR-YDEREPVRSIAISCGKI 355 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + QLNLF+D + EQL +D + + G +L A + +KR+ + Sbjct: 356 TLKTGLQLNLFEDTSHTLNQEQLEITVDKIRTRYGFKSLMHASSLLNGATGLKRSEM 412 >UniRef50_A2FMN4 ImpB/MucB/SamB family protein n=1 Tax=Trichomonas vaginalis RepID=A2FMN4_TRIVA Length = 519 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 80/361 (22%), Positives = 145/361 (40%), Gaps = 17/361 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 + CD+++F+AS E + P L G V + G + + EA+ GV+ G F Sbjct: 91 YMHCDLDSFFASVEALLDPSLKGTAFAVGGSVKRGIISTSSYEARKYGVRSGMAVFVAMK 150 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDF 119 L VV + ++ + Y + S +V ++ P + DEA D+T + N Sbjct: 151 LCPHLNVVHY-NHGDKYMNFSKQVQEVFKKYDPEFVSFGCDEATLDITPLLNDNLHSDQL 209 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++I+ V +T LTV +G+A T L+K+A+ K N + + + L Sbjct: 210 AKQIQQEVFDKTKLTVSIGVAHTPQLSKIASDINKPNGIFIVPK----NDDDLKSFLHTL 265 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + GIG + L +GI+T D+ + G + E Sbjct: 266 PVRKIPGIGGVNEQILKGIGIETCGDILLKKAEIWLTMSHKFCRFVFSAAVGVQPREYES 325 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q I R+ D ++ + S A + ++K++ CR ++ K F + Sbjct: 326 G--PQQSISKDRTID-ATDDKCTLIDLVESLARKISKKMKKMRIACRNVAVKFKDINFKV 382 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATR-SLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 S S T D D++NA+ + L+ + + + GV + S G + Sbjct: 383 ------ISKSYTFDYDTSDESDLVNASLKLLLEERQERSIKLRLVGVKATNLTSPGDKKQ 436 Query: 359 N 359 + Sbjct: 437 S 437 >UniRef50_A4RZX2 Predicted protein (Fragment) n=2 Tax=Ostreococcus RepID=A4RZX2_OSTLU Length = 427 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 77/343 (22%), Positives = 136/343 (39%), Gaps = 20/343 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + + D++ FYA+CE ++ P L PV V + + N A+ GV+ P F K L Sbjct: 88 WLVVDMDGFYAACEELYDPALKSVPVGVAAGPSSVLTTANYVARKYGVRAAMPGFIAKKL 147 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 +V +++ Y SN + +P S+DEA+ ++T D + Sbjct: 148 CPD--LVFVKPDFKKYVKASNESRGVFAQYNPDYIAGSLDEAYIEVTEYCEKHDTTMEAI 205 Query: 120 GREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EIR+ V + T LT VG ++ LAK+ + K + G + + K + Sbjct: 206 AEEIRSKVKEATGGLTCSVGGGCSRRLAKVCSDFNKPNGQYILG----TTRDDILKFLRD 261 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV ++GIG+ + + L+ IKT DL + + + G Sbjct: 262 LPVRKMYGIGKTLERILNEFDIKTCGDLLAKRATMLALFTPKAFDFLLGIALGIGTECHP 321 Query: 239 EFAPT----KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 P ++ + S +F + D + + A A + + + R ++ +K Sbjct: 322 RETPEGSGGRKGVSKSETF-KATADKAYLDAKMTELATEVALECQRLNLKGRMVAVKLKR 380 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 S F + L PT D + I+N+A R + G Sbjct: 381 STFDV------IQRQTTLAGPTNDVKTIVNSALRLMRNENSIG 417 >UniRef50_UPI0000F2F527 DNA-directed DNA polymerase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=UPI0000F2F527 Length = 375 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 122/375 (32%), Positives = 192/375 (51%), Gaps = 4/375 (1%) Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLT 108 MG+P F+ DL R V+ SSNY +Y +MS R L E EIYS+DEAF +LT Sbjct: 1 MGEPLFQILDLVMRNDVIVLSSNYIIYGEMSRRFHKILAEYVSPENHEIYSVDEAFLELT 60 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 R +L ++I+ +L+ L V VGI ++KT AK+ N+ AK + G Sbjct: 61 SYRGIYNLNQCAQDIKEKLLKLLSLPVCVGIGRSKTEAKIMNYIAKTYPHLNGICNVFDL 120 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 E + + V +VWG+G + KKL M I TV DL I+ F+VVL+RTV E Sbjct: 121 AEVKDSIFRNTDVGEVWGVGSQQKKKLRLMNINTVYDLMTASPSHIQSVFSVVLKRTVLE 180 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 L G C+ +E PTK++I+ SR+FG+RITD +++A+ A + R+E I Sbjct: 181 LNGISCIDIEHTPPTKKQIVSSRTFGQRITDIHDLKEAVIKRTQEAFTRARNEQVLVGCI 240 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 F ++PF +P+Y S PT D R ++ ATR +D ++++G ++KAGV+L Sbjct: 241 IVFAYSNPFDKTKPFYKKEQSSSFAVPTDDLRLLVQTATRLMDQVYKSGIEFKKAGVILT 300 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ-WQMKRAML 407 + +L D+ +EQLM ++ + G+ + F G + + W + Sbjct: 301 CLEPKHTYTYDLLTDHQDLEKTEQLMKAIEEVQQIFGKNKIGFGGSMFKNRIWNLTANYQ 360 Query: 408 SPRYTTRSSDLLRVK 422 + Y ++++K Sbjct: 361 TRNYF-SFDGMIKIK 374 >UniRef50_B0D0P7 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D0P7_LACBS Length = 420 Score = 235 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 73/326 (22%), Positives = 127/326 (38%), Gaps = 28/326 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AF+AS E ++ P+L GKP V G + + EA+ GV+ G P F K Sbjct: 106 IIVHVDMDAFFASVELLYNPELAGKPFGVG---RGVLTTASYEARKYGVRSGMPGFIAKK 162 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-- 118 L ++ S+N+ Y++MS +VM P + DEA+ ++T LT Sbjct: 163 LCPD--LILVSNNFSRYSEMSAKVMDIFRRYDPNMCPAGSDEAYLNITEYSVRHGLTAEV 220 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +E+R V T LTV GIA K K + + + M Sbjct: 221 CVQEMRKAVHAITQLTVSAGIAPNK---------NKPNGQFQIPF----DSASIKAFMHH 267 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + V GIGR + L+++GIKT D+ + L+ ++ G +E Sbjct: 268 LSIRKVPGIGRVNERLLESIGIKTCGDIYMHRVVISVMDKRFGLKFLLQTHLGIASNIVE 327 Query: 239 EF-APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ I R+F + D + Q + AA + + R ++ K + Sbjct: 328 PHLREERKSIGAERTFSS-LGDKEKILQKLQEIAAELEKDMSRNGWTGRTVTLKYKLDTY 386 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDII 323 + + + ++ Sbjct: 387 QV------FTRAKTFDRYVFTKEELY 406 >UniRef50_D2QRX3 DNA-directed DNA polymerase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRX3_9SPHI Length = 421 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 87/411 (21%), Positives = 154/411 (37%), Gaps = 30/411 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 D+N+F+ASCE L G+PV V + +GCVIA + EAK GVK G + Sbjct: 14 VLFVDMNSFFASCEQQDNYWLRGRPVGVCVYTGRNGCVIAPSVEAKLRGVKTGMRLDQAI 73 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L +V ++ Y + +++ L S V SIDEA DLT + D++ Sbjct: 74 VLCPE--LVPIETHPGRYREYHVKIIDVLRTFSDDVVPKSIDEAVVDLTNYQLVYKDMSQ 131 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 I+ + Q+ L +GIA LAKLA++ K + + E ++ Sbjct: 132 TAVAIKQAIRQKVGDWLRCSIGIAPNVFLAKLASNVQKPDG------LTIITPETIDSVL 185 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 + + D+ GIG R++ +L+A G++T L+L +R ++ Sbjct: 186 QTMTLTDLPGIGHRMAARLEAGGVRTPLELRYATPDHLRAVCKSIIGWHWHIRLNFGGEV 245 Query: 237 LEEFAPTKQEIICSRSFGERIT-DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + P + + R+ + + + + S ++ +C+ +S + Sbjct: 246 DLDTNPDNKSMSAMRTISQEQRSTPERLDELLQSLCLTLERRMVQRGVFCQDMSFSCRYH 305 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-------RYQKAGVMLG 348 + + P QD ++ L+ A + V + Sbjct: 306 NG------KTYNYEARFNEPKQDGLELYGIIRERLEKFQLAHRCEPVLNEHLRSMCVAVF 359 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 F V L+LF + + Q + L AK G L A + Sbjct: 360 RFIPAEVVPLSLFGNEDRKGKFRQ---TLYDLKAKFGTDKLIRATELRDNP 407 >UniRef50_A4S3F0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S3F0_OSTLU Length = 618 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 72/370 (19%), Positives = 127/370 (34%), Gaps = 28/370 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWG-KPVVVLSN----NDGCVIARNAEAKALGVKMGDPWF 56 D++ F+AS RP+L P+ V G V + N A+A GVK G Sbjct: 59 IFHVDMDCFFASVAMRARPELSTETPLAVSWGTSASKRGEVSSANYAARAFGVKAGMWLD 118 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEI-YSIDEAFCDLTGVRNCRD 115 + L +V ++ Y ++ V L E S + S DEAF D+T D Sbjct: 119 EALRLCPE--LVLAPYDFAEYEKVALEVYEILFEASRGECVGISCDEAFIDVTSRCESED 176 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 +IR V +T +GI LA+LA AK + +R+ Sbjct: 177 AVAVAEQIRRDVYAKTKCACSIGIGSNMLLARLATRRAKPDGAFR------VEPKDEREF 230 Query: 176 MSALPVDDVWGIGRRISKKLDA-MGIK---TVLDLADTDIRFIRKHFNVV-LERTVRELR 230 ++ + D+ G GR +KL I+ T L + ++ E+ + R Sbjct: 231 IAKTRLADLPGFGRHAGEKLQKSTKIRVTDTCETLLKVPVATLKSALGAQKTEKLLEAAR 290 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G P ++ I S+G R + A +++ R ++ Sbjct: 291 GIDKTPW-CVRPQRKSIGAQMSWGVRCASNEVAMDYVKQLVREVAYRMQRLKIRGRALNL 349 Query: 291 FIKTS--------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 + + + + + + + + D+ II+ A L + + Sbjct: 350 KLWRAIPDVNTMRDYQGHGACDVLTRTKAMRELSNDTELIISEALTILRELNVEATSIRG 409 Query: 343 AGVMLGDFFS 352 GV + Sbjct: 410 LGVSITKLEH 419 >UniRef50_D1BPP8 UMUC domain protein DNA-repair protein n=3 Tax=Veillonella RepID=D1BPP8_VEIPT Length = 427 Score = 234 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 80/422 (18%), Positives = 140/422 (33%), Gaps = 25/422 (5%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWF 56 ++ D+ FYAS E D + P+VV + +A + K LGVK F Sbjct: 9 LYMCIDLKCFYASVECADLGLDPFTTPLVVADGSRGKGAITLAISPALKKLGVKNRSRLF 68 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR 114 + + + + + Y +S + TL + V +YSIDE F D+T Sbjct: 69 Q---IPPHIEYLTVKPHMKRYMQVSAEIYGTLLKYVAPEDVHVYSIDEYFIDITPYLPLY 125 Query: 115 D--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + + VL T + VGI LAK+A K G L + Sbjct: 126 KKTPRQLAQMLLDAVLVATKIYATVGIGTNLFLAKIALDILAKHASDFIGY--LDESLFK 183 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 + P+ D+W IG+ I+ +L G + + + K F + E + G Sbjct: 184 ETIWYHQPLTDIWQIGKGIANRLHKYGAYDLHGITMIPEAKLYKEFGINAELIIDHAWGR 243 Query: 233 PCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 + + P K I S+ Y + +L I Sbjct: 244 EPCTIADIHAYRPIKHSISHSQILLRN-YTYEEACVPMREMVESLVLELLQIKGVTNHIY 302 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 I + E S KL T + + A + + ++ GV D Sbjct: 303 VHIGYAN----EMMRSTGGSKKLKQYTDSLQTLTTAVIKLYEQHCHKNELIRRIGVSFED 358 Query: 350 FFSQG--VAQLNLFD--DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 ++ + +LF+ Q+ M ++ + G+ ++ A ++ R Sbjct: 359 LVNRSAIPQEEDLFNILATDTEEKERQVQEAMLSIKEQFGKNSILRASSLQEEGTMRFRN 418 Query: 406 ML 407 L Sbjct: 419 TL 420 >UniRef50_A8VWB3 DNA-directed DNA polymerase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VWB3_9BACI Length = 421 Score = 234 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 86/416 (20%), Positives = 144/416 (34%), Gaps = 21/416 (5%) Query: 3 ALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEA-KALGVKMGDPWFK 57 D+ +FYAS D V V+ D V+A + E + +K G+ F+ Sbjct: 12 FCIDMKSFYASIACRKHGLDPLKACVAVVGAEDFDGSIVLAASPEMKRRFQIKTGNRRFE 71 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVR-NCR 114 + + Y D+S + + L + +YS+DE F T V + Sbjct: 72 IPK---HPDIRIIDAEMMNYLDVSVAITALLRRYFAPKDIFVYSVDEVFISFTPVHRHWH 128 Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + I+ +++ T + +GI L+KL + K G E + Sbjct: 129 SPEEAACYIQRKIMRETGVPSVIGIGDNMLLSKLCLDLSAKKTSSGIGRW---RYEDVEE 185 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEP 233 + D+WGIG R K+L MG++TV D++ + + F + G Sbjct: 186 KLWPHAARDMWGIGSRTGKRLRHMGVRTVGDISRAGEERLIREFGPAIGSQLYWHSLGVD 245 Query: 234 CLQLEEFAPTKQ-EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 +L AP I + Y ++ I + + R R + + Sbjct: 246 LTRLAPEAPKGDISISNGQILMRD-YSYEDVKVIILEMSEEVGRRTRQTGLMGRTVGLSV 304 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 E G + SV L + T + + AA LD ++ V LG+ Sbjct: 305 GY----GRETGGGFNRSVSLPSATNATTVLYRAALDLLDRHMLCDLPARQVTVSLGNLEP 360 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 QL L D+ QL +MD + K G L A + R L+ Sbjct: 361 DRYVQLTLLDEERISEKERQLGYIMDCIREKHGSNALLRAVSLTEAGTARHRNELT 416 >UniRef50_D2RTA3 DNA-directed DNA polymerase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RTA3_9EURY Length = 443 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 78/383 (20%), Positives = 143/383 (37%), Gaps = 38/383 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-----CVIARNAEAKALGVKMGDPW 55 + D + FYASCE + P L G+PVVV + V + EA+ GV+ Sbjct: 20 IVCHVDADCFYASCERLREPALRGEPVVVGMGYEPGETVGAVATASYEAREFGVESAQAI 79 Query: 56 FKQKDLFRRCGVV------------------CFSSNYELYADMSNRVMSTLEELSPRVEI 97 + R + + + Y +++ V L + + V Sbjct: 80 STALEHLPRRAALDPDADDHDPELTREETGFYRPVDMDYYESVASEVRDILHDCADVVRE 139 Query: 98 YSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ 157 SIDEA+ D+T F R I + + +TV VG+A T + AK+A+ K Sbjct: 140 VSIDEAYLDVTERTAWEVADGFARHITDRIRREVGVTVSVGVAPTMSAAKIASDFDKPDG 199 Query: 158 RQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKH 217 + + R+ ++ L VD + G+G +++L MG++T D+A D + + Sbjct: 200 ------LTVVRPGEVREFLAPLEVDLLHGVGPVTARELREMGLETAADVAAADPEPLVEA 253 Query: 218 FNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 F RG+ ++E + + + +++ + I + A+ A++ Sbjct: 254 FGERGRELYDRARGDDDRRVEPKGEP-KSFSRESASADPVSEPEPKYEQIETLASAVADR 312 Query: 278 LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 R E R + P+ +N + + L P D + A Sbjct: 313 ARREGALYRTVGVKAVLPPYDVN------TRARSLSGPVDDPDLVERIARDLFTEF--ET 364 Query: 338 HRYQKAGVMLGDFFSQGVAQLNL 360 +K GV + + Q +L Sbjct: 365 DPVRKVGVRVANLEFAAADQASL 387 >UniRef50_A2DLM9 ImpB/MucB/SamB family protein n=1 Tax=Trichomonas vaginalis RepID=A2DLM9_TRIVA Length = 592 Score = 233 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 85/379 (22%), Positives = 140/379 (36%), Gaps = 22/379 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D+++F+ASCE + P L G V G + + EA+ GV+ G F Sbjct: 88 YLHADLDSFFASCEALRDPSLVGTAFAVGGEIKHGVLSTTSYEARKFGVRSGMAVFIALQ 147 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTD 118 L + S+YELY S+ V E+ + +DEA DL+ D Sbjct: 148 LCPH--LKIVESHYELYKHYSSIVRKIFEKYDSHYISFGLDEASLDLSEHVKLDYEKAMD 205 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I+ V ++T LT+ GIA T LAK+A+ K + E +S Sbjct: 206 IAKNIQKEVFEQTKLTISCGIAITPQLAKIASDVNKPNGIFEIK----HDRESTLDFISK 261 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + GIG + L +GI T+ D+ D + + G Q Sbjct: 262 LPIRKIPGIGGVAEQLLHGIGITTMKDVMDKKTDLWICMRPLFCQFIFSACLGI-NRQTF 320 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 +Q I R+F D M + I + L+ + CR ++ K S F Sbjct: 321 GVTRHQQSISKERTFDN-TNDRVFMEEIIEKLCMEVCKLLQEMNVLCRNVTVKFKDSSFQ 379 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDFFSQGVAQ 357 + + T DI A + L+ ++ + +Y+ GV G + + Sbjct: 380 ------TITRCLSFDHDTNKIFDIFCACVKILNDELRSRYVKYRLLGVRCGQLSTPRAKR 433 Query: 358 ----LNLFDDNAPRPGSEQ 372 +F + Q Sbjct: 434 QISIQTMFKKCEKKQNESQ 452 >UniRef50_A8Z6F4 Umuc domain protein dna-repair protein n=2 Tax=Campylobacter RepID=A8Z6F4_CAMC1 Length = 422 Score = 233 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 87/418 (20%), Positives = 171/418 (40%), Gaps = 24/418 (5%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++A+ D+ +FYAS E V R D + +VV + G +A + +A GVK F Sbjct: 10 IYAVIDLKSFYASVECVERGLDPFKADLVVADASRGSGGICLAVSPALRAKGVKNRCRLF 69 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR 114 + + R + + Y D + R+ + + +YSIDE F DLT Sbjct: 70 E---IPRDVKFIIAPPRMQFYIDYAARIYEIYLKYVSKEDIYVYSIDECFIDLTSYLKFY 126 Query: 115 --DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + + + +L+ T +T G+ LAK+A K Q G+ L + Sbjct: 127 ALGAKEMAKMMMDEILKTTGVTATCGMGTNLYLAKIALDILAKHQD--DGIAYLDEELYK 184 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 ++L + P+ D W IG++ KL+ GI + D+A+ + K F V T+ G Sbjct: 185 KQLWTHQPLSDFWRIGKQTRLKLEKCGIFCMKDIANAPKSLLEKIFGVDAYITIDHANGI 244 Query: 233 PCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 +++ + P+ + S ++ + A R A +L ++ ++ Sbjct: 245 EPTTIAEIKAYKPSTKSYFSSEILPRDYERCEAVI-VLKEMADRLALRLINKDVRASGLT 303 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 ++ + + ASV+ TPT S +++AA L + ++ G+ D Sbjct: 304 INVRFADKLEPQQR----ASVRFKTPTNISSVLMSAAEELLLNKIKNVGLIRQIGISAND 359 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + +A+ +LF+D + ++ ++ + K G+ ++ A + + R Sbjct: 360 VVKENLAEFSLFED---DAKEKAVLKSLNLIKEKFGKNSILRAIDLLPEATGQDRNKK 414 >UniRef50_C1A0W3 DNA polymerase IV n=9 Tax=Corynebacterineae RepID=C1A0W3_RHOE4 Length = 454 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 100/418 (23%), Positives = 163/418 (38%), Gaps = 31/418 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKP-VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + RP L G+P +V G V + EA+ G + P + + Sbjct: 13 VLHLDMDAFFASAEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQARR 72 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAF---CDLTGVRNCRDLT 117 + G V LY+ +S R L P +E S+DEAF +L GV + Sbjct: 73 MV-GGGAVVLPPRMSLYSVLSKRTFDALRLRMPILEQLSVDEAFGEPVELAGVGADE-VR 130 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 F ++RA + T L +G K +AK+A+ AK V + Q +L+ Sbjct: 131 AFCEDLRALIKAETGLVASIGAGAGKQVAKIASGLAKPDG------VAVIPPGMQHELLD 184 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQ 236 LPV +WGIG +KL +GI+T+ A T I + R +G Sbjct: 185 PLPVRKLWGIGPVAEEKLKRLGIETIGGFARTPIAEVASILGTTVGPGLHRLAQGIDDRP 244 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + E ++I +F I +R A+ S A +L + + R + +K S Sbjct: 245 VAER-AESKQISAESTFAADIVTMAQLRAAVESSGRAAFSRLEKDGRAARTVVLKLKKSD 303 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 ++ + SV L T D + ++ A + + + G + GV V Sbjct: 304 MSI------LTRSVTLPFATIDRQILVATAQKQVIDPQELG-PIRLVGVGFAGLS--TVR 354 Query: 357 QLNLFDDNAPRP---GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 Q +LF + E L +D + A + Q+ W + P Y Sbjct: 355 QGSLFPELDQDVPGYPVETLTGALDEAELD-----VPVAARVPQRYWHPGLDVKHPEY 407 >UniRef50_Q5K8U2 Putative uncharacterized protein n=3 Tax=Agaricomycotina RepID=Q5K8U2_CRYNE Length = 658 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 72/382 (18%), Positives = 136/382 (35%), Gaps = 26/382 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E P L GK V G + + EA+ GV+ F K L Sbjct: 221 IIHVDMDAFYASVEVQRDPSLKGKAFGVG---KGVLCTASYEARKFGVRSAMAGFIAKKL 277 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 ++ +++LY S V L + + + S+DE + ++T + + ++ Sbjct: 278 CPH--IILTDLHFDLYTKASKAVKEVLVQYDENLMMASLDEGYLNITPYMSTHNMTASEV 335 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIRA V ++T LT+ GIA + LAK+ + K + + M L Sbjct: 336 VTEIRAQVEEKTSLTISAGIAANRMLAKICSDKNKPNGHFELAF----DRATIVRFMRDL 391 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV ++ G GR + L+ +GI+T D+ + + + R G + Sbjct: 392 PVRNIPGFGRVTERCLEGLGIQTCGDIYEKRVDLLLMDHWFGFRGLCRAYLGIADNTVAP 451 Query: 240 -FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F TD + + + L + ++ K Sbjct: 452 GRREERRSVGVERTF-RDKTDDEDIMATLIDIVEELGKDLDRLQYAGKTVTVKYK----- 505 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + + + + DI+ A L R + + + Sbjct: 506 --------TRAKSIPKYISSATDILPIAQELLKKELPLRIRLLGVRLSTLKDLTIPDKGI 557 Query: 359 NLFDDNAPRPGSEQLMTVMDTL 380 + R + +M ++ L Sbjct: 558 KGLPQRSERALLQHVMPLLQQL 579 >UniRef50_C4Z6F8 DNA polymerase V n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z6F8_EUBE2 Length = 455 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 85/445 (19%), Positives = 158/445 (35%), Gaps = 41/445 (9%) Query: 1 MFALCDVNAFYASCETVFR-PDLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++ D+ +FYAS E V R D +VV + +A K G+ F Sbjct: 4 VYIAIDLKSFYASVECVERESDPLTTNLVVADESRTAKTICLAVTPSLKKYGLSGRSRLF 63 Query: 57 KQKDLFRR--------CGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCD 106 + + + + LY + S+++ S + + +YSIDE F D Sbjct: 64 EVEQKAKEIEKRTGKKLEYIVAVPRMGLYIEYSSKIYSIYLKYFSKDDITVYSIDEVFID 123 Query: 107 LTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV 164 T + ++ V T +T GIA L K+A K + V Sbjct: 124 ATDYMKLYNMTARQLTAKVIEDVYDTTGITATAGIAPNLYLCKIAMDIVAKHIQADSKGV 183 Query: 165 DLSN---LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT---DIRFIRKHF 218 ++ + ++ L P+ D W +G IS++L+ GIKT+ D+A D ++ K F Sbjct: 184 RIAELSVNDYRKMLWGHTPLTDFWRVGPGISRQLEKHGIKTMGDIARMSLEDEDWLYKQF 243 Query: 219 NVVLERTVRELRGEPCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 V E + G ++++ P + + E + R + A A Sbjct: 244 GVDAEILIDHAWGYEPCTIADIKKYKPKASSLCSGQVLKEP-YTFEDARIVVGEMADELA 302 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYY---------------GNSASVKLLTPTQDSR 320 L + I+ + +++ Y G + SV L T T S+ Sbjct: 303 LDLVDKGFVTDSIALNVTYDRVNVDKGTYKGEIHVDRYGREVPQGLNKSVSLTTCTSSSK 362 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + A D +K + + + + G Q ++F D +++ M + Sbjct: 363 QLREAFLDIYDKYTDRKLYIRKLNLTVANLTNDGFQQFDMFTDQTQLEREKKMQHAMLDI 422 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRA 405 K G+ + A + ++R Sbjct: 423 KKKYGKNAVMKANNLQSKATAIERN 447 >UniRef50_B7P2Q3 DNA polymerase IV / kappa, putative n=1 Tax=Ixodes scapularis RepID=B7P2Q3_IXOSC Length = 487 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 78/359 (21%), Positives = 133/359 (37%), Gaps = 24/359 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++A++A+ E P L KP+ + N EA+ GV+ P F K Sbjct: 87 IVVHVDMDAYFAAVEMRDDPSLKDKPMAQAPFS-FLASTSNYEARKFGVRAAMPGFIGKK 145 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLTD 118 L ++ N+ Y+ +S V + +DEA+ D+T N D D Sbjct: 146 LCP--SLLIVRPNFNKYSSVSAEVRKVMARYDEDFMPVGLDEAYLDITDHVNATDADPED 203 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 RE+R + + T LT IA LAK+ + K + +++ R+ + + Sbjct: 204 IVREMRKKIFEATQLTAR--IAPNMFLAKVCSDIRKPNNQFRLP----NDINAVREFVRS 257 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ V GIG + L A+G +T DL +R G C +++ Sbjct: 258 LPIRKVPGIGAVQEQLLRALGAQTCHDLWVKRAAIGHLFGMTSARFYLRAALGLGCTEVK 317 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + +F E ++ ++ + E++ + R ++ IKT F Sbjct: 318 C-DSACKSKSVEETFSE-LSSPEALVSKCEELCEQLCEQVEDDGITGRVVTLKIKTVAFD 375 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR-----YQKAGVMLGDFFS 352 + + SV L + T I AA R L A + GV L Sbjct: 376 VM------TRSVTLDSATNRIEPIKKAALRLLRQEIAAAKPDCPLRLRLMGVRLSGLND 428 >UniRef50_C8WYD4 DNA-directed DNA polymerase n=4 Tax=Alicyclobacillus acidocaldarius RepID=C8WYD4_ALIAD Length = 418 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 83/423 (19%), Positives = 152/423 (35%), Gaps = 31/423 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLW----------GKPVVVLS---NNDGCVIARNAEAKAL 47 ++ L D+ +FYASCE R + P+VV G ++A AK Sbjct: 5 IYGLVDMQSFYASCEVASREEYAARRKEFDDSTDPPLVVSGDPARRSGIILAATPTAKRY 64 Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 GV+ + L+ R ++ + Y +S R+ +++ P E +S+DE F Sbjct: 65 GVENAMRLGEALRLYPR--LIVVRPHMAFYLHVSVRIQMLMQQCFPFQEQFSVDEGFIAF 122 Query: 108 TGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL 166 N D R ++A + + + +G+A K L A K ++T G + Sbjct: 123 PYPSNLFPDPIAAARNLQARIWDQFRIRARIGLAPNKWL----AKMANKAAKKTPGGIVW 178 Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 E ++ LPV+++WG+ RR +T+ D+A + ++ F V E Sbjct: 179 WREEDIPSVLHPLPVEEMWGLKRRAEVLRRKFKCETIGDVARLPVGVLKAEFGVWGEVIH 238 Query: 227 RELRGEPCLQLEE--FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 R G + + + + + + I +LR HQ Sbjct: 239 RWANGIDVSDINPDSYHAPHKGFSHRTTLPRDFYERSEIAVVILELLDEVCHRLRQAHQA 298 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 R + + G + L T D ++ LD W G + Sbjct: 299 GRRVGLGLTY-----EGLTGGFYRARTLPRATNDPAELYPVLLALLDEHWD-GSGVRAVS 352 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 V + + QL+LF P +L +D + A+ G ++ A + +R Sbjct: 353 VAVDMLQFRETLQLSLF---ENVPARTRLYETVDEIRARFGETSIMRAVSLTRAGQLRER 409 Query: 405 AML 407 ++ Sbjct: 410 SLR 412 >UniRef50_Q4P422 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P422_USTMA Length = 682 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 76/381 (19%), Positives = 144/381 (37%), Gaps = 30/381 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKA-LGVKMGDPWFKQKD 60 D++ FYA+ E P L GK V S ++ + EA+ GV+ G F K Sbjct: 148 ILHTDIDMFYAAVELARDPSLKGKCFGVGSG---VLVTASYEARRGYGVRSGMAVFVAKA 204 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTD 118 L ++ ++ + Y S +VM+ E+ + S+DEA+ D+T + Sbjct: 205 LCPH--LIVVKNDMQSYVQASQKVMAIFEQYDENLAKASLDEAYLDITEYVEQNASSIDQ 262 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +++R V T LTV VGIA LAK+++ K + + + M Sbjct: 263 VVQQLRNQVRSHTQLTVSVGIAPNTMLAKISSDRNKPDGQFRIQP----DRKVIVDFMRN 318 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP + GIGR + L+++G+ T ++ D + + F+ +E ++ G +E Sbjct: 319 LPCRKIPGIGRVNERILESLGVTTCGEIWDKRVE-LWLSFDGKIEWLIKAHLGIGNTVVE 377 Query: 239 EFAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F +D ++ + A R + L + I+ K F Sbjct: 378 PSKREERKSVGREHTFS-PTSDTKALLDLLKESAQRVEQDLARLDFKAKTITLVAKRDNF 436 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSL-DAIWQAGH-RYQKAGVMLGDFFSQGV 355 S + + ++ + + L I + G + GV + Sbjct: 437 Q------RFSRARTSTRLVHRAEELYDITSSLLMQEIEREGAISLRLIGVRVTQLV---- 486 Query: 356 AQLNLFDDNAPRPGSEQLMTV 376 +L A +L+ Sbjct: 487 ---DLRGAAAGEERLRKLLQA 504 >UniRef50_Q8RNE6 UmuC protein (Fragment) n=6 Tax=Proteobacteria RepID=Q8RNE6_ECOLX Length = 225 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 221/225 (98%), Positives = 224/225 (99%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD Sbjct: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV NCRDLTDFG Sbjct: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVHNCRDLTDFG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 REIRATVLQRTHLTVGVGIAQTKTLAKLAN+AAKKWQRQTGGVVDLSNLERQRKLMSALP Sbjct: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANYAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 VD+VWGIGRRISKKLDAMGIKTVLDLAD+DIRFIRKHFNVVLERT Sbjct: 181 VDEVWGIGRRISKKLDAMGIKTVLDLADSDIRFIRKHFNVVLERT 225 >UniRef50_Q09615 Protein ZK675.2, partially confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q09615_CAEEL Length = 1027 Score = 230 bits (586), Expect = 7e-59, Method: Composition-based stats. Identities = 73/407 (17%), Positives = 136/407 (33%), Gaps = 35/407 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------VIARNAEAKALGVKMGDPW 55 D++ F+ S R DL K V + + V + + A+ GVK G Sbjct: 440 VFHVDLDCFFVSVAVRNRIDLKHKEVAITHSKGTISNSMSEVASCSYAARDCGVKNGMLV 499 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR- 114 + + +E Y +S ++ L + V S DE + +++ Sbjct: 500 RDALQKCPQLTL--LPYQFEDYVQVSRKIYEILASYTLEVRAVSCDEMYINMSSFCEKYE 557 Query: 115 --DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 D T IR + ++T VGI T LA+LA AK V N ++ Sbjct: 558 INDPTILAEHIRKVIREKTQCPASVGIGSTSLLARLATRHAKPDG------VFWVNAHKK 611 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAM--GIKTVLDLADTDIRFIRKHF-NVVLERTVREL 229 + +S V D+ G G + +L + I +L R + F + + +R+ Sbjct: 612 NEFISEEKVKDLPGFGYEMMNRLTSFFGDITKCRELQLKTERELVPVFGPKLASKILRQC 671 Query: 230 RGEPCLQLEEF-APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 RG + + ++ + C ++G R T + Q + + A KL I Sbjct: 672 RGIEEDPDDFWATHVRKSVSCDINYGIRFTKRGEVIQLMTAIGAELERKLIDSKLTAGSI 731 Query: 289 STFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 + + TS F + + + L PT + + A + + Sbjct: 732 TLKLMVRSANAPIQTSKFMGHGICDTFTKTCNLNVPTTRGESLTSEAMKLYAKVSPKVED 791 Query: 340 YQKAGVMLGDF-----FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 + GV G A +F + + ++ + Sbjct: 792 LRGVGVTCGKLKSKLKKDAATAVQEMFGKTSRVGNMARTDEQLNIIP 838 >UniRef50_C7N9E0 DNA-directed DNA polymerase n=5 Tax=Fusobacteriaceae RepID=C7N9E0_LEPBD Length = 363 Score = 230 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 72/374 (19%), Positives = 147/374 (39%), Gaps = 30/374 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++AF+A+ E +L GKP+ + V + EA+ G+K P + K Sbjct: 6 IYLHYDMDAFFAAIEQRDNKELRGKPIAIGHG---VVTTASYEARKFGIKSAMPTVQAKR 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD----- 115 L ++ S ++Y + R+ ++ + + E S+DE + D+T ++ Sbjct: 63 LCP--SLIVVSLRKDIYFEEGRRIQGLIKNILKKCEFTSVDEGYIDITEFIQNKNIKLDK 120 Query: 116 ------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + F ++ + + + LT VGI +K AK+A+ K G N Sbjct: 121 RDEILKIERFIKKFKQYIYDNSKLTCSVGIGFSKISAKIASDINKPN-----GYFIFKNR 175 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRE 228 E + + + + GIG++ + L TV L + + + + F E Sbjct: 176 EHFLEYIYDKNLAIIPGIGKKTREVLKLFNTTTVFQLYEIEKNELIRRFGMSKGEYLYNT 235 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 +RG ++ +Q +F D + + + + + KL ++++ + + Sbjct: 236 VRGLHFTEINT-DRKRQSYGHEITFNREENDISIIYDELKKQSNKLSRKLIEKNEFAKTV 294 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + I+ S F + + S L T + I A +L+ ++ + GV L Sbjct: 295 TVKIRYSNFVTH------TRSRTLENATNNENKIYEATLENLN-FFEKKDEIRLIGVQLS 347 Query: 349 DFFSQGVAQLNLFD 362 V QL+ D Sbjct: 348 SILKSNVVQLSFND 361 >UniRef50_B6HNR2 Pc21g13870 protein n=17 Tax=Leotiomyceta RepID=B6HNR2_PENCW Length = 611 Score = 230 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 79/370 (21%), Positives = 147/370 (39%), Gaps = 21/370 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+A+ E + RP+L P+ V G + N A+ GV+ G F K L Sbjct: 114 VIHVDCDAFFAAVEELDRPELKRVPMAVG---KGVLTTCNYLARKFGVRSGMASFVAKKL 170 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDF 119 + +V NYE Y + + + + E P E SIDEA+ ++T N + + Sbjct: 171 CPQ--LVLLPQNYEKYTAKAKEIRAIMAEYDPLFESASIDEAYLNITAYCNENHLEPDEV 228 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R +RA +L+ T ++V GIA +AK+A++ K + ++ + + M L Sbjct: 229 VRRMRAEILETTKVSVSAGIAANAKIAKIASNINKPNGQFQ----VPNDRDAIMEFMRDL 284 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V V GIGR ++L+++G+K D+ + + + G ++E Sbjct: 285 SVRKVNGIGRVFERELESIGVKKCGDIFPHRALLTKLFGEKAFQFLAQCYLGLGRTKMEP 344 Query: 240 -FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F E I D +R + A + L R + +K F Sbjct: 345 VETHERKSVSTETTFHE-IGDKEELRAKLWWAAQELEKDLARTQFKGRTLVLKVKLHTFE 403 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVA 356 + + ++D+ + A L + + + + G+ + S Sbjct: 404 V------LTRQTAPPRAVSLAKDLYSFALPMLAKLERDIPDMKLRLLGLRCSNLVSTQKV 457 Query: 357 QLNLFDDNAP 366 +N F A Sbjct: 458 GINFFGVAAQ 467 >UniRef50_C8PJM6 DNA polymerase IV n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PJM6_9PROT Length = 385 Score = 230 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 80/405 (19%), Positives = 150/405 (37%), Gaps = 32/405 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-----------CVIARNAEAKALGV 49 M A D+++F+ S + P L GK + V+ D +++ + EA+A GV Sbjct: 1 MIAHIDLDSFFVSVARLADPVLVGKKIAVVGGGDEEIFGGKSELGSVILSASYEARADGV 60 Query: 50 KMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG 109 P L + ++ + + Y S + L +P +E +SIDE F +L G Sbjct: 61 HSAQPVKIALGLCPQ--LILVRARHGEYRKASREIYEFLLSFTPEIEKFSIDEFFLNLRG 118 Query: 110 VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 D F +++ +++R L VG+++ K +AKLA K + + Sbjct: 119 TPYDADALGFAAFLQSEIMRRFSLPCSVGLSEAKLIAKLATSLTKPFGVRQ------ILK 172 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 + + +S++PV GIG+ K L GI + D R I + + L Sbjct: 173 SQIARELSSVPVAKFPGIGKAAQKTLGKYGIVSFGDALGH--REIFEKMGANGRKIFAAL 230 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 GE ++ ++ I RSF D +R+ I A A ++ + Sbjct: 231 SGEDEGRVVS-KRERKSIGFGRSFA-PCADRDELRRKILILARHLAGEVLARGLKPATYD 288 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 I+ + L ++ + ++ + G + + L + Sbjct: 289 LKIRYKSREEFSHQISQDRAFSLSLLSETALELFKLCD------VKKGAQIIHVALNLSN 342 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 F + + L LF + + L + + K G L A + Sbjct: 343 FSGKSGSSL-LFCEIDK--KQQSLDRSLSRIWEKFGIEKLKKASE 384 >UniRef50_Q4S0P1 Chromosome 2 SCAF14781, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4S0P1_TETNG Length = 1313 Score = 230 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 131/355 (36%), Gaps = 27/355 (7%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + + + EA+ GV+ G + K K L + ++E Y +++ + TL + +E Sbjct: 627 IASCSYEARQAGVRNGMFFGKAKQLCP--SLQAVPYDFEAYKEVALTMYDTLAGYTHDIE 684 Query: 97 IYSIDEAFCDLTGVRN--CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DE D + + C + + + IRA + ++T VG+ LA+LA AK Sbjct: 685 ALSCDELLMDTSALLAELCVNPEELAKAIRADIKEKTGCCASVGMGSNILLARLATRKAK 744 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + E + LPV + G+G +S+KL AMG+++ DL + + Sbjct: 745 PDGQYF------LRSEDVDDFIRDLPVTSLPGVGPVMSRKLAAMGVRSCGDLQQVSMSQL 798 Query: 215 RKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 +K F + R RG + + ++ + ++ R T + + + Sbjct: 799 QKKFGPRTGQTLFRFSRGLDDRPVR-YEKERKSVSADMNYNIRFTTVDEAECFLTNLSME 857 Query: 274 AAEKLRSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 ++L+ R ++ + + + + + +V L T D R I Sbjct: 858 VQKRLQEAGLRGRRVTLKVMVRKVGAPQEPAKYGGHGICDNLARTVMLAASTDDGRLIAA 917 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 A + A+ + G+ + +A ++D Sbjct: 918 AVIKLFHAMKLQVQDLRGVGIQVQLLDGNAHQ------ASAGPRKRSIKDMLLDQ 966 >UniRef50_Q4Q8C4 DNA polymerase kappa, putative (Dna polymerase iv, putative) n=3 Tax=Leishmania RepID=Q4Q8C4_LEIMA Length = 598 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 125/362 (34%), Gaps = 16/362 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ E P L GKP V S + N A+ GV+ G P F K L Sbjct: 145 YIHIDMDMFYAAVEEKKTPSLRGKPFGVGSQQ--MLSTTNYIARQYGVRSGMPGFIGKKL 202 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR---DLTD 118 ++ +++ Y + RV S + +DE D+T +D Sbjct: 203 CPE--LIIVPNDFPAYQREAARVHSIASRYDAQFVSVGLDELTMDVTKYLQEFPAVSASD 260 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + R V +T LT GI T LAK+A++ K + L E + Sbjct: 261 IAHDFRDEVFLKTQLTSSGGIGPTSILAKIASNVNKPNGQHEI---TLLTREEVINYVRD 317 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 +P+ + GIG L A+ I T L + L + G Sbjct: 318 IPLRKIPGIGYAQEMTLGALHIHTCGGLLEHKYLLAYLFREKTLAHYLSVGLGLAETFSL 377 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 +Q + SF E + + + + + +H R ++ +K + Sbjct: 378 RKHQARQSVGKETSFSEPLPSPEAFTRLFRKLLEQCHVRCVRDHLQPRKMTLVLKYRTYD 437 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + SV L + T D + + A+ + L+ + GV L F Sbjct: 438 TEQF------SVTLPSHTNDLKVWLEASQKLLEPHLLHYAELRLIGVRLQRFTDIDDDHA 491 Query: 359 NL 360 L Sbjct: 492 GL 493 >UniRef50_Q568P0 Zgc:110185 n=3 Tax=Clupeocephala RepID=Q568P0_DANRE Length = 710 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 69/394 (17%), Positives = 126/394 (31%), Gaps = 54/394 (13%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P L KP+ + ++ N A+ LGV + Sbjct: 38 VILHFDLDCFYAQVEMIRNPALRTKPLGI--QQKYIIVTSNYVARELGVNKLMSVTDAVE 95 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--------- 111 + +V + Y +MS +V L P VE DE F D+T + Sbjct: 96 KCPQLVLVKGE-DLTHYREMSYKVTELLMSYCPLVERLGFDENFMDVTEMVEKRIKETRI 154 Query: 112 ----------------------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLA 149 + E+R + LT G+A K LAKL Sbjct: 155 SDLSFNGHVYNHESVVVDEENIRLAVGSVIAAEMRQAIFSTLGLTGCAGVASNKLLAKLV 214 Query: 150 NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT 209 + + K Q+ L + S + V GIG + +KL A+G+ V DL Sbjct: 215 SGSFKPNQQT-----TLLPHSNAELMSSLTGLIKVPGIGYKTREKLKALGLVNVRDLQLY 269 Query: 210 DIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAIC 268 + + K F +R G + P Q + SF ++++ + + I Sbjct: 270 PLSDLVKEFGEMNAKRVQNLACGIDDSPVTPAGPP-QSLSDEDSF-KKMSTLEEVLKKIE 327 Query: 269 SYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT-------QDSRD 321 E++ + + + I+ N + S + T Sbjct: 328 ELLINLTERMHKDGRQPHTLRLTIRKYT-VTNRWFNRESRQCPIPNHTGLKITGGSSEAV 386 Query: 322 --IINAATRSLDAIWQAGHRYQ--KAGVMLGDFF 351 +++ + + + + V + Sbjct: 387 PQLLSLSMKLFHKMVDPHQPFHLTLLNVCFSNLQ 420 >UniRef50_Q9UNA4 DNA polymerase iota n=24 Tax=Chordata RepID=POLI_HUMAN Length = 715 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 82/410 (20%), Positives = 147/410 (35%), Gaps = 61/410 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P+L KP+ V V+ N EA+ LGVK K+ Sbjct: 29 VIVHVDLDCFYAQVEMISNPELKDKPLGV--QQKYLVVTCNYEARKLGVKKLMNVRDAKE 86 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--------- 111 + +V + Y +MS +V LEE SP VE DE F DLT + Sbjct: 87 KCPQLVLVNGE-DLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQS 145 Query: 112 --------------------------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + E+R + + LT G+A K L Sbjct: 146 DELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLL 205 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLDAMGIKTVL 204 AKL + K Q+ + E + L+ +L + ++ GIG + +K L+A+GI +V Sbjct: 206 AKLVSGVFKPNQQ------TVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVR 259 Query: 205 DLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 DL + + K + +R + GE + P Q SF ++ + Sbjct: 260 DLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPP-QSFSEEDSF-KKCSSEVEA 317 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP------TQ 317 + I A ++ + + + I+ ++ + Y S + + T Sbjct: 318 KNKIEELLASLLNRVCQDGRKPHTVRLIIRR--YSSEKHYGRESRQCPIPSHVIQKLGTG 375 Query: 318 DSRD---IINAATRSLDAIWQAGHRYQ--KAGVMLGDFFSQGVAQLNLFD 362 + +++ + + + V + + A+ L D Sbjct: 376 NYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLKALNTAKKGLID 425 >UniRef50_C5MCF2 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MCF2_CANTT Length = 1121 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 66/404 (16%), Positives = 128/404 (31%), Gaps = 39/404 (9%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + RPDL P+ V + + N A++ G+K G Sbjct: 398 VIMHIDFDCFFATASCLLRPDLDINKHPIAVTHGGRTSDIASCNYVARSFGLKNGMWLGS 457 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCRD 115 K + ++ +++ Y S+ + L + + SIDE D T N + Sbjct: 458 AKKMCP--NLITLPYDFDSYEKYSSEFYNYLLSSKYFDSIFPVSIDEVLVDATTYCNSQI 515 Query: 116 L------TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + IR V T +V VG + LAKLA AK + Sbjct: 516 GGIHTVVEELSSRIRQDVFTLTKCSVSVGASTNVLLAKLALRKAKPNGQFQLF------- 568 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT---VLDLADTDIRFIRKHF-NVVLERT 225 + + + + D+ G GR I +KL T + D+ + + + Sbjct: 569 DNVESFLQTISIRDLPGFGRGIMEKLQNHTSATNPEIKDILHLSKAALIESLGEKTGCKL 628 Query: 226 VRELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 RG ++E E ++ + +FG R + + + ++L Sbjct: 629 YEYCRGIDETKIEIDTKNPEAMLGRKSVSVDVNFGIRFDTVEELDDFLVRLSKELYQRLV 688 Query: 280 SEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 + +S + F + S +L PT D I N Sbjct: 689 TLGICGSSLSLRLAKRAAGAPVNPPKFLGMGYCDYVNKSSRLGVPTNDWGIIGNEVKSLY 748 Query: 331 DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 ++ + + + + + ++L Sbjct: 749 RSVNIQVSELRGVSITMAKLKDTESVKNSRQMRLPFAKAKDKLQ 792 >UniRef50_C7I020 DNA-directed DNA polymerase n=1 Tax=Thiomonas intermedia K12 RepID=C7I020_THIIN Length = 415 Score = 227 bits (579), Expect = 5e-58, Method: Composition-based stats. Identities = 94/410 (22%), Positives = 165/410 (40%), Gaps = 21/410 (5%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKD 60 L D N+++AS E P+L G+PV V+ + C IA + EAKA GVK G + + Sbjct: 6 LLVDFNSYFASVEQQLCPELRGRPVGVVPMLADTTCCIAASYEAKAFGVKTGTQVAEARR 65 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L G+V + + Y + +R ++ ++ ++P ++ SIDE C L G + T Sbjct: 66 LCP--GIVFVVARHAEYVQIHHRAVAVVDTIAPVEQVLSIDEMACSLPMGWTSRERATQL 123 Query: 120 GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 ++A + + L V VGIA LAK A++ K + + + + Sbjct: 124 ALRLKAALREALGECLRVSVGIAPNVFLAKQASNLQKPDG------LVVIDAGDLPGPLL 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQ 236 + + D+ GI R+ +L A GI +V L +R + + E L G Sbjct: 178 RMQLTDLTGINVRMLARLQAQGIHSVEHLWRARREQLRVVWGGMAGEAFYDRLHGLASG- 236 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + A ++ + S + + +AA +LR EH ++ +K + Sbjct: 237 -VQAANPRRSLGHSHVLPPEMRSAEGALAVLDRLTQKAAMRLRREHLLAGAMTVMLKLT- 294 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + + PT D+R +++ + AG K ++L D G Sbjct: 295 -RRHGERLRPERGARFA-PTADTRALLHTLRELWPGMVPAGWAPMKVAMLLHDLRQPGQT 352 Query: 357 QLNLF--DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 +LF D L + +D LN + GR T+Y ++ R Sbjct: 353 SASLFEGDVPGTEAEQAALWSAVDALNVRYGRHTIYCGSGHQGREEAPMR 402 >UniRef50_Q6C2B9 YALI0F09141p n=1 Tax=Yarrowia lipolytica RepID=Q6C2B9_YARLI Length = 1219 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 72/378 (19%), Positives = 132/378 (34%), Gaps = 30/378 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQ 58 + D ++F+ + T+ RPDL KPV V S + + N EA+ GVK G + Sbjct: 518 IIMHLDFDSFFVAVSTLDRPDLTRKPVAVGSGGSRNADIASCNYEARKYGVKNGMWMSRA 577 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNC---- 113 L + N+ Y ++S + L E + S+DEA D T + Sbjct: 578 LKLCPD--LQTVDYNFPKYEEVSEAFYTILRESQLDYIRPVSVDEALVDATTLIEANATE 635 Query: 114 ----RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + I V T + VG ++ LAKLA AK GV + + Sbjct: 636 CSLSEAAETVAKAIATKVRATTGCNISVGCSRNILLAKLALREAKPN-----GVHVMFDQ 690 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTD---IRFIRKHFNVVLERT 225 + +L+ + ++ GIGR I+ ++ + + + T LA + Sbjct: 691 KAISQLLDKTKISEIPGIGRSIAGQIREKLHVSTAGKLARLKDVIPNMSALLGPKRGPQI 750 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 V G+ Q+ ++ I S+G R + + + +A A ++ Sbjct: 751 VDFCLGKDDSQIA-VQDERKSISVEISYGVRFENKKQFDGFVFNMSAELASRMEEISVEG 809 Query: 286 RFISTF-------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH 338 ++ +T + + + SV L + +I AA A+ Sbjct: 810 SQLTCKLYVRKNEHETPKYMGHGQCDIYNKSVSLGCSVSSTSEINLAARGQFAAMGYDPV 869 Query: 339 RYQKAGVMLGDFFSQGVA 356 + G+ + Sbjct: 870 LVRGVGIQITKLTRDKGK 887 >UniRef50_C1DYT2 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1DYT2_9CHLO Length = 306 Score = 226 bits (577), Expect = 8e-58, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 126/312 (40%), Gaps = 29/312 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++ F+AS + RP+L G PV V + G + + N A+ G + G + Sbjct: 4 VILHVDMDCFFASVAALGRPELAGLPVAVSWSSAGGGELSSCNYLARNAGCRAGMRIARA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--L 116 K+L ++ +E Y+ ++ V TL ELSP V S+DEA+ D+TG+ C Sbjct: 64 KELCP--NLIVMPYEFERYSAVAIDVYRTLHELSPHVMGVSVDEAYVDVTGLAACGRKTP 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + ++RA + +T VG + +A+LA AK + Sbjct: 122 REIAEDVRAKIFAKTGCVASVGSGPNRLIARLATKRAKPDGSHH------VPASNASSFL 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIK---------------TVLDLADTDIRFIRKHF-NV 220 +++PV ++ G+GR +KL GI T D+A + +R+ Sbjct: 176 ASMPVAELPGVGRGTLEKLRREGIGSMVGAVGPMGTAGNPTCADVAAAPLSVLRRALGPK 235 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG E P ++ + ++G R + + A +E++R Sbjct: 236 AGAQLRDASRGIDARAW-EARPPRKSVGAQVTWGVRFEEAAEAVAFVEKLCAEVSERMRR 294 Query: 281 EHQYCRFISTFI 292 R ++ I Sbjct: 295 LRVKGRTLTLKI 306 >UniRef50_UPI0000DB6FEF PREDICTED: similar to DNApol- CG7602-PA, isoform A n=1 Tax=Apis mellifera RepID=UPI0000DB6FEF Length = 540 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 74/445 (16%), Positives = 140/445 (31%), Gaps = 64/445 (14%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 DV+ FYA E + P+L KP+ V V+ N A+ G+K + L Sbjct: 16 IIHIDVDCFYAQVEMLRHPELENKPLGV--QQKNMVVTSNYIAREYGIKKCMSVQEALRL 73 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR---------- 111 +V + Y S +++ L + +P VE D+ F D+T + Sbjct: 74 CPGLALVNGE-DLTNYRHFSTKILEILHQFTPLVERLGFDDNFMDVTSIVQKYMNSGNNS 132 Query: 112 -------------------------------NCRDLTDFGREIRATVLQRTHLTVGVGIA 140 + EIR + + H+T GIA Sbjct: 133 ELNINISMEDENPVGEIFGASEEECPCGCHARLIIASKIAAEIRERIYKDLHVTCSAGIA 192 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLDAMG 199 K LAKL K Q+ L L+S + V + G+G++ ++ L + Sbjct: 193 HNKLLAKLVGSLHKPNQQ------TLIFPCSAPMLLSNIGSVSKIPGVGQKTTQLLMSNN 246 Query: 200 IKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 IKT+ DL T + + + L R G ++ KQ I F + ++ Sbjct: 247 IKTIDDLRKTSLETLEMKIGIDLARKLKDNAEGIDETVVKPTG-KKQSIGLEDGF-KSVS 304 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP--- 315 + + + R E + + + ++ F + + L Sbjct: 305 LVAEVESRLGALLRRLTELAMEDGRIPVAMRLTVRKHDFNKSSSGKRETRQCALPKHLLP 364 Query: 316 -----TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 D ++ A + + ++ F + Sbjct: 365 SSKSGVYDHAKMLTLAMKLFHRTVDVSKPFH-LTLLGVAFTKFEERSSGKNSITSFLRKQ 423 Query: 371 EQLMTVMDTLNAKEGRGTLYFAGQG 395 + +V+D ++++EG + Sbjct: 424 VAVQSVLD-ISSEEGISDINLGSPM 447 >UniRef50_D1AVL7 DNA-directed DNA polymerase n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AVL7_STRM9 Length = 421 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 75/418 (17%), Positives = 147/418 (35%), Gaps = 21/418 (5%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWF 56 ++A D +FYAS E R D + +VV N +A K GVK F Sbjct: 8 VYACIDFKSFYASVECAERNLDPFTTNLVVADETRGNGAVTLAITPYMKKQGVKNRCRIF 67 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR 114 + + + +LY S + + + IYSIDE F +LT Sbjct: 68 Q---IPEDIEYIKAMPRMKLYMKYSAEIYAIYLRYIAPEDIYIYSIDECFIELTPYLKLY 124 Query: 115 D--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + D I+ + + + GI LAK+A K + G++DL+ + Sbjct: 125 NMRAKDIVIMIKNAIFEEMKIPSSAGIGTNLFLAKVALDVVAKKVKDEIGMLDLNR--FK 182 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 + + P+ D+W IG+ I+K+L+ G+ + L+ D + F + G Sbjct: 183 KYIWKHRPITDIWNIGKGIAKRLEKYGVYDLYSLSLMDEEILYNEFGENALFLIEHSHGI 242 Query: 233 PCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 +++ + + I S+ + ++ + + +L + + I Sbjct: 243 EPCTIAEIKAYKSKTKSISNSQILFDD-YNFEDAKMIMLEMLDNLVLELVAFNYTIDNIY 301 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 ++ S S S K+ T R + T + + ++ + L + Sbjct: 302 LGVRYS----GIDKKRVSGSKKIGIRTNSFRKLSKIYTEFFNEKVDKSLKIKQITLSLNN 357 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 Q +FD+ +E+ + + K G+ + ++ R L Sbjct: 358 VLEDAWIQKEIFDETHLDEKNEKAQKAILEIKEKFGKNAILKGRSINEKSTAKARNKL 415 >UniRef50_C3AWZ9 DNA-damage repair protein n=3 Tax=Bacillus cereus group RepID=C3AWZ9_BACMY Length = 396 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 81/394 (20%), Positives = 152/394 (38%), Gaps = 18/394 (4%) Query: 22 LWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYAD 79 L K VV N V+A E K LG+ ++ ++ ++ + + Sbjct: 7 LKVKLAVVGDVNRKGSIVLACTPELKKLGISTATRLYEIPK---DPNIIIVNATMGRFVE 63 Query: 80 MSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTV 135 +SN++ + + ++SIDE F D+ + I+ + T +T Sbjct: 64 ISNQITEIYTKYVALEDLHVFSIDECFLDMEQTAHLFGRDPIVIAERIQKEIYDTTGITA 123 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +GI L+K+A K +V + + +KL + P+ DV GIG L Sbjct: 124 SIGIGPNLFLSKVALDVESKH--SRSRIVLWTYEDVPKKLWNIKPLKDVCGIGSATQDAL 181 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEE-FAPTKQEIICSRSF 253 MG+ ++ D+A+T + K F V E R G ++ + P I + Sbjct: 182 HGMGLFSLQDVANTPKERLIKRFGKVKGEELHRFSFGIDESRIANKYIPKSTSITKGQIL 241 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 E ++ I +LRS + CR + I S + ++ L Sbjct: 242 LEDCYSLNKLKLLILEQIEETCFRLRSMDKCCRTVELAIGYSKYIGGGFK----RAITLD 297 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 PT + D+ A+ + L +GH ++ + L + Q++LF+D + + +L Sbjct: 298 QPTCLTEDVYEASLQLLRRF-HSGHPVRQIHITLKNLTRDDAIQMSLFEDTSRKDTQRKL 356 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 MD++ + G+ ++ IQ Q +R Sbjct: 357 AKTMDSIRNRYGKNSIMRGISYIQGATQRERNNK 390 >UniRef50_B0UY97 Novel protein similar to vertebrate REV1 homolog (S. cerevisiae) (REV1) n=3 Tax=Danio rerio RepID=B0UY97_DANRE Length = 1268 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 121/326 (37%), Gaps = 21/326 (6%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + + + EA+ GV+ G + + K L + ++ Y +++ + L + +E Sbjct: 547 IASCSYEARQAGVRNGMFFGRAKQLCPD--LQSVPYDFHAYKEVALAMYEILASYTHNIE 604 Query: 97 IYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DEA D T + + R IR + ++T VG++ LA++A AK Sbjct: 605 ALSCDEALVDATALLVELGVSPDELARSIREDIKEKTGCCASVGMSSNILLARMATRKAK 664 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + L E + PV + G+GR +S KL ++G+ T DL + + Sbjct: 665 PKGQY------LLRSEEVDDFIRDQPVSSLPGVGRSMSSKLTSLGVSTCGDLQQLSLSQL 718 Query: 215 RKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 ++ F + R RG + ++ + ++ R T + + + Sbjct: 719 QREFGPRTGQTLFRFCRGLDDRPVRSEK-ERKSVSAEMNYNIRFTQVEEAESFLNNLSME 777 Query: 274 AAEKLRSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 ++L R ++ + + + + + SV L PT R I + Sbjct: 778 VQKRLEGAGLRGRRVTLKVMMRKPGAPVEPAKYGGHGICDNFARSVLLAQPTDSGRVIAS 837 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDF 350 A + A+ + G+ + Sbjct: 838 EAIKLFHAMKLNVKDMRGVGLQVQQL 863 >UniRef50_UPI0001745AF1 DNA-directed DNA polymerase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745AF1 Length = 405 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 98/407 (24%), Positives = 154/407 (37%), Gaps = 28/407 (6%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D+++F+AS E P L G+PV V+ + IA + EA+ GVK G + L Sbjct: 7 LDLDSFFASVEQQLDPRLRGRPVGVVPVKSESTSCIAASKEARRFGVKTGTRVRDARQLC 66 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDFGR 121 +V S LY + R ++ LE E+ SIDEA+C L V N F R Sbjct: 67 PE--IVFVESRPRLYTEFHQRFVTALESRIQVAEVMSIDEAWCLLPKSVTNRTQAEAFAR 124 Query: 122 EIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++AT+ + LT +GIA + LAKLA+ K + + + L Sbjct: 125 SLKATLTSQVGDWLTYSIGIAPNRFLAKLASDMGKPDG------LFMIEQADLPHCLHQL 178 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLE 238 + D GIG+++ +L A GI+TV L + + + LRGE Sbjct: 179 KLRDFCGIGQKMETRLVAHGIRTVAQLTSATRETLHHVWGGIGGVHLWHWLRGEVTEPPP 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 I S R+ + C +AA +LR + + FIK + Sbjct: 239 TQRRV---IGHSHVLPTRLRNDLGTHAVSCRLLQKAAMRLRKMDHFTCRLELFIKYTNSP 295 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAA-TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 TQD+ ++ A +AG + GV L Sbjct: 296 SWSSDISF-------CDTQDTFRLLEAFEVLWDRRPRRAGLEPKATGVNLSGLAPATKVT 348 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 +L +QL +MD +N + G+ + F G ++ R Sbjct: 349 PSLL---EFDKRQQQLCGLMDAINKRYGQNAVCFGGALGALEYTPMR 392 >UniRef50_UPI00017B5397 UPI00017B5397 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B5397 Length = 711 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 70/403 (17%), Positives = 131/403 (32%), Gaps = 59/403 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P L P+ + ++ N A+ +GV K+ Sbjct: 39 IILHFDLDCFYAQVEMIRNPALREVPLGI--QQKYIIVTCNYVAREMGVTKLMSVANAKE 96 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--- 117 + +V + Y ++S +V L P VE DE F D+T + R Sbjct: 97 KCPQLVLVKGE-DLTHYREVSYKVTELLMSYCPLVERLGFDENFMDVTEMVERRLAETSE 155 Query: 118 -----------------------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 E+R + + LT GIA K LAKL Sbjct: 156 LDISFKGHVYGHVSAEVKATDHARLALGSHIAAELREAIHCKLGLTGCAGIATNKLLAKL 215 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLDAMGIKTVLDLA 207 + K Q+ + E ++ L + V G+G + +KKL +GI TV +L Sbjct: 216 VSGTFKPNQQTSLL------PENISDIVGCLSSLRKVPGVGHQTAKKLQDLGIFTVKELQ 269 Query: 208 DTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAI 267 + + F +R + G + Q + SF ++++ + I Sbjct: 270 HFPVNHLVGEFGRTAQRLKSLVLGVDDSPVTPTGAP-QSLSDEDSF-KKMSSTKECLEKI 327 Query: 268 CSYAARAAE--KLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT--------- 316 E ++R +++ + I+ A N+ + S + Sbjct: 328 EELLRSLVERTRMRKDNRQPQTFRLTIRRYS-ATNKWFNRESRQAPIPNHVGQKITSGSK 386 Query: 317 -QDSRDIINAATRSLDAIWQAG--HRYQKAGVMLGDFFSQGVA 356 ++ A + + V + ++ A Sbjct: 387 EDAVAQLVPLAMKLFHKMVDTSAFFHLTLINVCFSNLRNRAAA 429 >UniRef50_C9RQ99 UMUC domain protein DNA-repair protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQ99_FIBSS Length = 466 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 77/451 (17%), Positives = 149/451 (33%), Gaps = 47/451 (10%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +F+AS E V R D +VV + +A + KA G+ F+ Sbjct: 10 YVAIDLKSFFASVECVLRGLDPLSTNLVVADASRTEKTICLAVSPSLKAYGIPGRARLFE 69 Query: 58 QKDLFR--------RCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDL 107 R + Y + S RV + + + + +YSIDE F DL Sbjct: 70 VIQKVREVKRQTGKDVEYIVAPPQMAKYVEYSTRVFNVYLKYVSADDIHVYSIDECFIDL 129 Query: 108 TGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW---QRQTGG 162 T + + +E+ VL+ T +T GI L K+A K Sbjct: 130 THYLSMYKKSARELAKEMIRDVLETTGITATAGIGTNLYLCKIAMDVMAKHVAPDADGVR 189 Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRISKKL------DAMGIKTVLDLADTD---IRF 213 + +L + +++L P+ W +GR I+++L + GI T+ DLA Sbjct: 190 IAELDEMTYRKELWGHRPITSFWQLGRGIAERLAHCYLNNGRGIFTMGDLARASVKHPDA 249 Query: 214 IRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 + K F V E + G +++++ I + D + I Sbjct: 250 LYKMFGVNAEILIDHAWGYEPCGIAEIKQYKSKTHSIGGGQVLSCA-YDCAKAKIVIREM 308 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYG---------------NSASVKLLTP 315 A L + ++ + +++ Y + L+ Sbjct: 309 VDTLALDLVEKGLVTNGLTLHVGYDRENVDKGIYHGETVIDNYGREIPKPAHGTAPLMNY 368 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 T + I A + D I ++ + + +LF D +++M Sbjct: 369 TSSASTIAEAVMKLADRIMNPLLTVKRLNLTANNVLEATQESYDLFTDVKKIEREKKMMQ 428 Query: 376 VMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 + + G+ ++ + +R Sbjct: 429 AQIAIKKRFGKNAIFKGMDMQEGATTRERNQ 459 >UniRef50_A6Q1N4 DNA polymerase IV n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q1N4_NITSB Length = 418 Score = 224 bits (572), Expect = 3e-57, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 142/442 (32%), Gaps = 70/442 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 M D++AF+ S E + +P L P V Sbjct: 1 MKIHIDIDAFFISAERLKKPSLRNIPAAVGGRGDPFIFDSKNQHKMDLLQKHQGAFVPSI 60 Query: 34 ------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 G +I + EA+ GVK G + L + N+ Sbjct: 61 FYDADMEFDEYFKDGGKIRGIIITSSYEARRYGVKTGMSVKEALQLCPH--LKVVPPNHL 118 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTV 135 Y +S + + L++ P VE +SIDE F DL G F ++ + + L V Sbjct: 119 YYHKLSKALHNLLQKEIPVVEQFSIDEFFGDLDGYIEDEYTETFIHHLQILIKDKLGLPV 178 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +G A++K AKLA AK + E + +P++ GIGR K+L Sbjct: 179 SIGAAKSKWTAKLATSYAKPHGIKVV--------EDVEGFIQNIPLEKFPGIGRGYFKRL 230 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 GI+T+ + + I + + + GE L P ++ + SR+ Sbjct: 231 KRYGIQTLGETKYI--KDIFYSWKKPGITLYKRIWGEDNESLHPKIP-RKSVGISRTI-N 286 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 I+D +++ + A ++ + E +K S + + Sbjct: 287 PISDRKELKRRVIVLARHLSDSVAKERFNPTQYFLSLKYDTG-------YKSKAHIIDET 339 Query: 316 TQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 T A + + + + F +L + +L+ Sbjct: 340 TFSEAKCKRIALELFEQADKYPTASVTRIALRCLRFKKFSSYELL---NWKKDKKFTKLL 396 Query: 375 TVMDTLNAKEGRGTLYFAGQGI 396 + K G + + + + Sbjct: 397 QQSRKVRQKYGMDLIKWGVELM 418 >UniRef50_C8WH43 UMUC domain protein DNA-repair protein n=3 Tax=Bacteria RepID=C8WH43_EGGLE Length = 443 Score = 224 bits (570), Expect = 6e-57, Method: Composition-based stats. Identities = 73/437 (16%), Positives = 140/437 (32%), Gaps = 39/437 (8%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E V R D +VV + +A KALG+ F+ Sbjct: 5 YVCIDLKSFYASVECVDRGLDPLTANLVVADPDRTEKTICLAITPSMKALGLSSRCRVFE 64 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR- 114 + V + Y + S + S V YSIDE F D T + Sbjct: 65 ---IPENVDYVMAKPRMQRYMEASADIYSIYLRFVSPEDVHPYSIDECFIDATPYLSLYR 121 Query: 115 -DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 +F + VL T + G+ LAK+A K R G L E +R Sbjct: 122 TSAREFAVMLMEAVLAETGVRATAGVGPNLFLAKVALDITAKHARDCIG--FLDQAEFER 179 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + + P+ D+W IG I+++L + + + + + + F V E + G Sbjct: 180 TIQTHRPITDIWNIGPGIARRLAKYAVYDLRGVCEMSEATLYREFGVNAEYLIDHAHGVE 239 Query: 234 CL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + P+ + + + R + + L + IS Sbjct: 240 PCTIADIHAYEPSGHSLGNGQVLPCD-YSFEEARDVLREMVDQLVLDLVEKRLVAGSISL 298 Query: 291 FIKTSPF----------------------ALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 ++ + + + ++ + T ++ Sbjct: 299 YVGYAKGPGERAGESDGAFFDGGHGRRPASGRRGFSHTGSTRRQADRTNLYSKLMPRFLD 358 Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 D + ++ V +G + A ++LF D +L + + + G+ Sbjct: 359 LFDETTRKDAPIRRINVGVGGVLPEEFATMDLFSDVEAEAEEHRLQQAVLAVKGRFGKNA 418 Query: 389 LYFAGQGIQQQWQMKRA 405 L ++ +R Sbjct: 419 LLRGTSLKEKATARERN 435 >UniRef50_UPI00006A0370 DNA repair protein REV1 (EC 2.7.7.-) (Rev1-like terminal deoxycytidyl transferase) (Alpha integrin-binding protein 80) (AIBP80). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A0370 Length = 1225 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 67/420 (15%), Positives = 124/420 (29%), Gaps = 77/420 (18%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVV-------------------------------- 29 D++ F+ S RPDL GKPV V Sbjct: 405 IIHVDMDCFFVSVAIRNRPDLKGKPVAVTSNRGAGTTTTREGANPQLEFQYYQNRILKGK 464 Query: 30 ---------------------LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVV 68 + + + + EA+ + K R+ Sbjct: 465 ADQPTSISSDSAQQNGLDLDISHLSMAEIASCSYEARYCIKRNRSKISKIYYCCRKA--- 521 Query: 69 CFSSNYELYADMSNRVMSTL-EELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRA 125 S Y + +E S DEA D+TG+ + IR Sbjct: 522 -VSCGIIFYFSQIQLKKKIFFAFYTHDIEAVSCDEALADITGILTETRLTPDEASNAIRT 580 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 V ++T VGI LA++A AK + E + V+++ Sbjct: 581 EVKEKTGCAASVGIGSNILLARMATRRAKPDGQYH------LKPEEVDDFIRGQLVNNLP 634 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTK 244 G+GR I KL +G+KT DL + + ++K F + R RG + + + Sbjct: 635 GVGRTIEYKLSCLGVKTCGDLQNITMAKLQKEFGPKTGQMLYRFCRGLDDRPIRKEK-ER 693 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TS 295 + + ++G R T + + + +L + ++ I + Sbjct: 694 KSVSAEINYGIRFTQTSEAEAFLINLSEEIQRRLEVVGMKGKKLTLKIMVRKAGAPIEPA 753 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + + + +V L T ++ I A + + G+ + Sbjct: 754 KYGGHGICDNVARTVTLHQATASAKVIGKEAVDMFHTMKLNISDIRGVGLQMHQLVPVHG 813 >UniRef50_B1AJ79 DNA polymerase IV n=15 Tax=Ureaplasma RepID=DPO4_UREP2 Length = 360 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 77/366 (21%), Positives = 154/366 (42%), Gaps = 21/366 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AFYA+ + P+ P+ V S + G + + N A++ GVK P F Sbjct: 8 IIMHLDIDAFYATVSELLHPEYKNFPIAVGSLNSRTGIISSPNYLARSYGVKAAMPIFLA 67 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DL 116 K+L ++ S + +Y S + + + ++EI SIDE F D T + ++ Sbjct: 68 KELCP--NLIILPSEHNIYQSYSKHFFQIINKYTNKIEITSIDECFIDATDLVKKYHNNI 125 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +I+ + + +L++ +GI+ KT+AK+A K + + + L+ Sbjct: 126 RLLATKIQKEIKNKLNLSISIGISYNKTIAKMATELNKPSGIS------IIDENKIINLI 179 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDL-ADTDIRFIRKHFNVVLERTVRELRGEPCL 235 L ++ + IG S++L A+ I + +L A + + I + + V +L+G + Sbjct: 180 YELNINKIPYIGEIKSQELYAINIFKIKELIATENKQKISLVLGSIYQNLVNDLKGLSKI 239 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ + + I S++F E + D+ + + +L+ + IS +IK Sbjct: 240 KIIDE-DIYKTISHSKTFNEDLNDFYEISNEMNDLILTVTNRLKKCNLMTNNISIYIKYP 298 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F +L T D + I A ++L I + G+ L + Sbjct: 299 SFKTKI------KQKQLTYYTDDYQTIF-LAIKNLFKIMYKDETIRLIGISLNKLVKKEN 351 Query: 356 AQLNLF 361 + LF Sbjct: 352 VKKQLF 357 >UniRef50_C4XEA8 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEA8_MYCFE Length = 416 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 86/412 (20%), Positives = 171/412 (41%), Gaps = 25/412 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D ++++ S P+L GK V + V + + E K G K+G P K + Sbjct: 7 IFHMDFDSYFVSAHRSINPELKGKSVAIGRRLKRSIVSSISYELKRKGAKVGWPKNKILE 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTL-EELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 + V N++LY +SN++ + E+ + +E++SIDE + D+T + RD D Sbjct: 67 IDP--LTVFIEPNFDLYLSLSNKIFEFISEKYTKNIEVFSIDECWLDVTDIIKNRDPKDL 124 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + I++ +L + +GI+ K LAKL+ + K + + E K + L Sbjct: 125 AKSIQSDILNTFDIPATIGISYNKFLAKLSTNLGKPFGILE------TKEEDIEKRIWPL 178 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR--FIRKHFNVVLERTVRELRGEPCLQL 237 P+ + +GIG +++L M I T+ LA + I+K F V + + E +G QL Sbjct: 179 PIIEFFGIGAPTAERLIRMHIDTIGKLAKCNWENFKIQKIFGVKTKGIILEAQGNGNDQL 238 Query: 238 EEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + I +F I D + + S + +++ ++ + IS I+ Sbjct: 239 NYEHNDLKNIGNELTFLTYDIDDRKEILLILRSLCVKVSKRAKNRNTLPEVISCSIR--- 295 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QG 354 + +S + + D I A++ + +W + GV L + Sbjct: 296 ---DTNKTWHSKQKTMSVVSNDEDIIFKEASKLFEILWNE-EPIRGIGVRLHKLVNEFDY 351 Query: 355 VAQLNLFDDNAPRPGSE-QLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 QL++F ++ +++ +N + L A + +++ K+ Sbjct: 352 GKQLSIFTTPEDESSQTIKIKNIINDVNYQLRDKKLKLASEYSKEK--KKQN 401 >UniRef50_Q2BYP9 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Photobacterium RepID=Q2BYP9_9GAMM Length = 426 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 103/431 (23%), Positives = 187/431 (43%), Gaps = 16/431 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M L D FYA ++P L P++V + + A N + +G+ P +++ D Sbjct: 1 MICLLDGTRFYAESCITYKPALRNTPLLVTTGQGISI-AANRASTNIGISKFTPIWEEID 59 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR-DLT 117 R + + +N+ ++ S+R M+ LE+ R YS+DE F D++ + DL Sbjct: 60 RLRVHKGIVYKANFNTFSHHSDRFMTALEKHIQDARSMRYSVDEVFYDVSHLYRINVDLN 119 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + + +R + + T + G G+ +T TLAK+A+ AAK + G L + + ++ Sbjct: 120 EHVQALRKAIYKETGVPTGAGVGKTLTLAKVASWAAK-NCQPYQGQCVLISEKETDTVLK 178 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 +PV +W IGR+++K L GI T L D + K +++ + + EL G CL + Sbjct: 179 QMPVGKLWNIGRQLNKHLTQEGILTAYQLKQCDTKTYHKRYSINVANVISELNGIACLDI 238 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 K++I + S+ +R+ + + + A K+R + + +S F+ TS + Sbjct: 239 SVEREKKKQIWSTASYRDRLHHRDDLFAELAHHCAEVMRKIRDQKSEMKTLSVFVCTSKY 298 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDI--INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 P+Y T S + + A L A K GV V Sbjct: 299 DRCPPFYRRGELTLENGLTDTSFALQQLRALFDDLIPNNLAKQPIYKVGVGAPSLIDAEV 358 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS----PRY 411 Q LF+ + L +D L+ + G+G + FA Q+ + ++ + Y Sbjct: 359 KQFELFNRFD---NKDTLNNTLDQLSDRFGKGVIGFA--CQQRSYHERQGEIEMLELENY 413 Query: 412 TTRSSDLLRVK 422 T D++ VK Sbjct: 414 YTDIKDIVVVK 424 >UniRef50_A8EUX3 DNA polymerase IV n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EUX3_ARCB4 Length = 421 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 82/438 (18%), Positives = 151/438 (34%), Gaps = 66/438 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 MF D++ F+ S E L PV V + Sbjct: 1 MFIHLDIDCFFVSAERTLNKSLLDIPVAVGGRSSNDIFSSKKVQRTIATNRAAFSSKILS 60 Query: 34 ------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 G + + EA+ GVK + L + ++ NY Sbjct: 61 NDTHKSFKEYFIDENGRIRGIITTCSYEARKFGVKTAMSVNEALRLCPKLKMI--PPNYS 118 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTV 135 LY ++SN++ LE+ P +E YSIDE FCD++G ++ +F ++ +L L + Sbjct: 119 LYDELSNKLKDLLEKEVPLIEQYSIDEFFCDVSGYIKEDEILEFAHFLKKKILDELDLPI 178 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +GIA TK L+KL AK + + + + +P+++ GIG+ + +KL Sbjct: 179 SIGIASTKYLSKLMTEYAKPNGIKY------VSSQDMPEFTKDIPIENFSGIGKALCEKL 232 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 I T+ D+ + + + + G +L ++ + RSF Sbjct: 233 KGYNINTLGDIRK--NQKLFYSWQKSGIDLYNRVCGIRDNKL-TIQRERKSLGIGRSFDV 289 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 + D +R+ + + + ++ E S I+ Y + Sbjct: 290 -VFDRNEVRRRVMILSRYLSFIIKKEKVNPLSYSILIRYEYGIKVRDYINVNRLF----- 343 Query: 316 TQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 + D + + + H + + + +F NLFD + L Sbjct: 344 --NEVDFKAEMIKLFEVVDSHKTHGVIQLYITVFNFAKSNDFTANLFD-YEEEIKKQALT 400 Query: 375 TVMDTLNAKEGRGTLYFA 392 M L K G + A Sbjct: 401 NQMQKLRLKYGVDIVKSA 418 >UniRef50_Q5QZ82 DinP n=2 Tax=Idiomarina RepID=Q5QZ82_IDILO Length = 356 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 69/365 (18%), Positives = 144/365 (39%), Gaps = 25/365 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQKD 60 AL D++AF+AS E + P L +P V + V+A N A+ GVK P + Sbjct: 8 IALLDLDAFFASAEELRDPSLKTRPFAVGGGGERGVVATANYLARQFGVKSAMPGSHARR 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + + Y ++S++V+ L EL+PR+E SIDE + DLT + + Sbjct: 68 LCPQ--LTFIRPDGNYYRELSDKVLDILRELTPRIEPASIDEFYLDLTHLEGFKGSATLA 125 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + ++ +T GI+ K +AK+A+ K + + ++AL Sbjct: 126 MDFVREQIKTLGITGSAGISNQKMVAKIASEERKPDGQF------VVRPAEVMDYIAALN 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEE 239 + + G+G + + L G+ T D+ + +++ ++ + G ++ Sbjct: 180 LKQIPGVGPKSQQVLTNYGLTTGKDIQNIELQQLQAILGDKAGYVLFERCHGRDRREVVT 239 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAIC-SYAARAAEKLRSEHQY---CRFISTFIKTS 295 ++ + ++ + + + + + + ++++ H R + +K S Sbjct: 240 E-RIRKSVGVEQTLATDMRLESTAQAYVQDNLLPKLRQRMKITHWREQPIRSQTLKLKFS 298 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F S S + ++P+ + + A R G + G+ Sbjct: 299 DFT----QTTVSRSAQFISPSLFYQLLDEAWQRG------KGKGVRLLGISATLPDPNEQ 348 Query: 356 AQLNL 360 QL L Sbjct: 349 LQLEL 353 >UniRef50_B4WAK0 ImpB/MucB/SamB family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WAK0_9CAUL Length = 433 Score = 223 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 92/405 (22%), Positives = 156/405 (38%), Gaps = 24/405 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAF+AS E PD G+PV+V + IA + E+KA GV G + + Sbjct: 13 WLFVDLNAFFASVEQQMNPDWQGRPVIVRPAMSEYTGAIAASYESKAWGVHTGMRVSEAR 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L G++ + +LY + ++M+ ++ P ++ SIDE C+L G + Sbjct: 73 KLCP--GLIVAEARPDLYVAVHKKIMAEIDRHVPVWKVGSIDECSCELLGPERQEANAVA 130 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 R I+A +L+ L +G+A ++ LAK A K + + + Sbjct: 131 LARRIQAGILENVGDCLRSSIGLAPSRFLAKTACGMKKPAG------LTILRANELPGPL 184 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCL 235 LP+ GIG R+ +L+A G+ L R R +N + ER R L G Sbjct: 185 LDLPLSKYPGIGPRMRLRLEAAGVADTAGLWTMSARQARAVWNSIEGERIWRGLHGLDSE 244 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 E P I S + + R + +LR ++ + Sbjct: 245 PTPEKPPA--SISHSHVLAQAMRTPDKARALARRLVVKCGARLRRMGLTGASLTLHLDMG 302 Query: 296 PFALNEPYYGNSASVKLLT---PTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDF 350 P A + + PTQD+ ++ A + R GV + Sbjct: 303 PKATPRSDRRGWETAAMSCPVAPTQDTFALLTALDVLWRKVEPELEAGRLSYVGVGVHGL 362 Query: 351 FSQGVAQLNLFDDNAPRPGSE---QLMTVMDTLNAKEGRGTLYFA 392 S+ + +LFD + G +L +D LN + G+ T+ Sbjct: 363 KSRDAFETDLFDTGPDQGGEAPSLRLSQALDALNRRYGKDTVSIG 407 >UniRef50_A3GH67 DNA repair protein n=2 Tax=Pichia stipitis RepID=A3GH67_PICST Length = 1118 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 67/388 (17%), Positives = 122/388 (31%), Gaps = 44/388 (11%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + RP+L P+ V V + N A+ GVK G + Sbjct: 406 VIFHVDFDCFFATASCLNRPELDINKDPIAVTHGGKSSDVASCNYVARNFGVKNGMWVSQ 465 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCRD 115 K L ++ +Y+ Y S+ + + SIDE D + + Sbjct: 466 AKKLCP--NLIMLDYDYKRYESYSSEFYNYFLSYDIFDSIFPVSIDEVLIDASSHFAQNE 523 Query: 116 ------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + IR + + T +V VG+++ LAKLA AK + Sbjct: 524 ENLVDMVNALSTRIRDDIFKFTKCSVSVGVSRNVMLAKLALRKAKPNGQFFLY------- 576 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKL-------DAMGIKTVLDLADTDIRFIRKHF-NVV 221 E + + ++ V + GIGR I ++L M I + DL + + Sbjct: 577 EGVDEFLDSISVKSLPGIGRSIQERLADVLNQPKTMDIY-IRDLKAFSKTKLISILGDKT 635 Query: 222 LERTVRELRGEPCLQL------EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + RG L E ++ + +FG R + + A Sbjct: 636 GVKLYEYARGIDDTSLVIDTSNPEALLGRKSVSVDVNFGIRFDTVSELDDFLIRIAKELY 695 Query: 276 EKLRSEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 +L S ++ + + + + S L PT D I + Sbjct: 696 SRLISLGVCGSNLTLKLAKRAPGAAVNPAKYLGMGYCDFVNKSSHLGVPTNDWGIIGSEL 755 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + + L Sbjct: 756 KALYRMVNVPVKELRGISISLTKLRDVE 783 >UniRef50_A8PXZ2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PXZ2_MALGO Length = 525 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 75/378 (19%), Positives = 133/378 (35%), Gaps = 25/378 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 CD++ FYA+ E RP+L G V ++ + EA+ GV+ F + + Sbjct: 42 ILHCDMDMFYAAVELQRRPELAGACFAVGHG---VLLTASYEARQFGVRSAMAEFVARAI 98 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD---LTD 118 ++ ++ ++Y S VM+ L + ++ S+DEA+ D+T D Sbjct: 99 CP--NLIVVPAHMDVYKRSSEAVMAVLAKYDAQLYQRSLDEAYLDITSYCAEHGHAHPRD 156 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++RA VL T LTV VGIA + LAK+A+ K + M Sbjct: 157 VAAQLRADVLAATGLTVSVGIAPNRLLAKIASDRCKPNGLWYVAP----TRQDALAFMHD 212 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L V V GIG+ + + L AM I T DL + I + G + Sbjct: 213 LSVRKVPGIGQVMERMLQAMSIHTCHDLWERRIEL--SLCIDSYRMLLASALGIGDAHVT 270 Query: 239 -EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F +D + + + + L + R +S K F Sbjct: 271 LPARTARRSVGRELTFA-PTSDPTHLHAKLRATCEQLERDLATLEYRGRTVSLVGKHDTF 329 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFSQG 354 + + D+ L+ + + GV + Sbjct: 330 E------RFTRARACPQGVSSFDDLYGVVHALLEQERASFPVPLCLRLIGVRVSSLIDLQ 383 Query: 355 VAQLNLFDDNAPRPGSEQ 372 VA+ + P + + Sbjct: 384 VARNGVLAQWLRMPAAAR 401 >UniRef50_Q0FDK2 UMUC-like DNA-repair protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FDK2_9RHOB Length = 401 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 85/411 (20%), Positives = 157/411 (38%), Gaps = 27/411 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKD 60 D+N+F+AS E P L GKPV + + C++A + EAK GVK + K Sbjct: 7 IYIDMNSFFASVEQHEEPYLRGKPVGITAMEGDVGCLVAASYEAKYFGVKTTMSIKEAKI 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDF 119 L + ++ S + LY + R+ ++ + + S+DE L G N + Sbjct: 67 LCPK--IILRPSRHRLYVRYNQRIARIFDQYAELEYVRSVDEFQIALGGTTSNLNVASKL 124 Query: 120 GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + ++ + L GI LAK+A K Q + + + +S Sbjct: 125 VKTMKDALKYEIGENLKFSAGIGSNHLLAKIAGKLEKPDGMQ------WLSPDNMPQRLS 178 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQ 236 +P+ D+ GIGR + KL++ GI + + D R RK + +++ ER +R L+GE Sbjct: 179 NIPLGDLPGIGRGVLFKLNSAGIHNCEQMYNLDPRHARKIWGSIIGERFIRLLQGED--- 235 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + S+ + ++ +LR ++ S F++ Sbjct: 236 IPLETTKRGGYGNSKMLAPENRTLKNAYLVSRWLIEKSVARLRRDNYTASQFSLFLR--- 292 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR--YQKAGVMLGDFFSQG 354 + P SVK +QD+ ++ R ++ H V LG+ Sbjct: 293 --IQNPRNRWGHSVK-THYSQDTAHFLDINRRLWRMMYSQKHPYLISSISVHLGNILPLN 349 Query: 355 VAQLNLFDDNAPRPG--SEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 + E+L +DT+N + G T+ + + + Sbjct: 350 KRSGEMLLPMEMAKKNDRERLSRTLDTINKRFGASTITYGINKAHNGFFER 400 >UniRef50_Q4D5I0 DNA polymerase kappa, putative n=4 Tax=Trypanosoma cruzi RepID=Q4D5I0_TRYCR Length = 604 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 76/367 (20%), Positives = 127/367 (34%), Gaps = 25/367 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ E P L P+ V + + N A+ GV+ G P + L Sbjct: 159 YVHVDMDMFYAAVEMKKNPSLVDVPLGVGTF--DMLSTTNYVARRYGVRSGMPGYIGVKL 216 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT---D 118 +V ++ + Y + V P +DE ++T D Sbjct: 217 CP--SLVIVPTDLDAYHAEAAVVRGIAAAYDPNFTSVGLDELTMEVTAYLQQHPGMTAGD 274 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E RA V T LT GI T TLAK+A++ K + + L + + M Sbjct: 275 VASEFRARVFAETQLTASAGIGPTATLAKIASNYEKPNGQHE---LRLRTRQDVMEFMKD 331 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV V GIGR L +GI + ++ D + + G Sbjct: 332 LPVRTVPGIGRSTESILHGLGINLLGEIYDRRVELCYILTEKTFCFLLGSSMGVVRWMDA 391 Query: 239 EFAP--------TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + ++ I R+F ++ ++Q S A +L +CR I Sbjct: 392 DTNDGSERTTEAERKSIGMERTF-RNLSSRLELQQIAHSALQTAHRRLEENELFCRQIVL 450 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 K + F +++ S L + D + L I + GV L D Sbjct: 451 KTKRASFQVHQY------SKNLPQHSDDLETLRRGVDELLLRIADQYAFLRLVGVRLADI 504 Query: 351 FSQGVAQ 357 ++ + Sbjct: 505 ITKSEYE 511 >UniRef50_B3PM57 Pol_IV_kappa DNA polymerase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM57_MYCA5 Length = 416 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 157/372 (42%), Gaps = 24/372 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ +CE P L +PV + + + + E K LG++ GDP K K Sbjct: 8 IFHIDMDAFFINCERAIDPRLDNQPVAIGKVHKRSIATSVSYELKKLGLRPGDPSLKVKH 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLE-ELSPRVEIYSIDEAFCDLTGVR--NCRDLT 117 L V+ +Y+LY+ S R+ LE + +EIYSIDE + ++T + Sbjct: 68 LCP--NVIFVEPHYQLYSSYSKRIFDYLETHYTHTIEIYSIDECYLEVTTILNNRKISAQ 125 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 EI+ +L + L +GI+ TK LAK++ + AK + + + K Sbjct: 126 ALAFEIQKNILDKFQLPCSIGISFTKFLAKMSTNKAKPFGILE------TKKQDIEKHFY 179 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLAD-TDIRFIRKHFNVVLERTVRELRGEPCLQ 236 L + +++G+G+ + KL GI T DL + + +F+R F + EL+G L Sbjct: 180 DLDIQEIFGVGKASTAKLKEYGINTYRDLVNEKNTQFLRSVFGKRFYSLILELKG-DNLH 238 Query: 237 LEEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + I S SF I D+ + + A +E+ + + I+ I+ + Sbjct: 239 DHVQNEEAKGISNSMSFIENNIADFNEISNCLYELAENVSERAKITNVEGSTITVMIRWA 298 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--Q 353 +S ++ T + DI N L+++W + G+ + + S Sbjct: 299 N------KNWSSKQKRIHFYTNEVNDIYNFGKDLLESLWDQS-AIRGIGIAISNLRSIFN 351 Query: 354 GVAQLNLFDDNA 365 +LF D Sbjct: 352 RDNAFDLFCDFK 363 >UniRef50_Q0IJ37 DNA polymerase iota n=5 Tax=Eukaryota RepID=Q0IJ37_XENTR Length = 742 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 78/406 (19%), Positives = 141/406 (34%), Gaps = 58/406 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P+L KP+ + V+ N EA+ GV ++ Sbjct: 51 VIVHIDMDCFYAQVEMIRNPELRNKPLGI--QQKYIVVTCNYEARKFGVTKLMLIKDARE 108 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-- 118 + +V + Y +MS R LEE SP+VE DE + D+T + + + + Sbjct: 109 KCPQLVLVSGE-DLTPYREMSYRATELLEEFSPQVERLGFDENYIDVTELVDKKLQEERG 167 Query: 119 --------------------------------FGREIRATVLQRTHLTVGVGIAQTKTLA 146 EIRA + R LT G A K LA Sbjct: 168 NGRNPGVCGHVYSDQKMNVNDWAHVRIAAGSHIASEIRAALYNRLGLTGCAGTASNKLLA 227 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLDAMGIKTVLD 205 KL + K Q+ E L+++L V + GIG + SK+L+++G+ + D Sbjct: 228 KLVSGTHKPNQQTALL------HESHSHLINSLDHVKRIPGIGYKTSKRLESLGLSRISD 281 Query: 206 LADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 L I + K F R RGE + P Q I SF ++ + ++ Sbjct: 282 LQACPITLLEKEFGSSVAHRIQMLSRGEDDSAVVPSGPP-QSISDEDSF-KKCSTVSEVK 339 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT-------- 316 + ++ + + + I+ N+ + S + Sbjct: 340 IKMEERLRNLLVRISKDGRIPHTLRLTIRQFS-PSNKWFNRESRQCPIPAHISQNIGAEC 398 Query: 317 QDSRDIINAATRSLDAI--WQAGHRYQKAGVMLGDFFSQGVAQLNL 360 Q ++ R + + + V + + + ++ Sbjct: 399 QAVPALMELLMRLFEKMIDVKMQFHLTLLNVCFSNLKASNSTRSSI 444 >UniRef50_A5DN15 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DN15_PICGU Length = 1098 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 127/387 (32%), Gaps = 42/387 (10%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D ++F+ + + P+L +P+ V V + N A++ G++ G+ + Sbjct: 406 VILHVDFDSFFVTASCLSHPNLDIKKQPIAVSHGTKTSDVASCNYVARSFGIRNGEWVGR 465 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRN--- 112 ++ +++ Y S + + L ++ V SIDE D T + Sbjct: 466 AMKKCPE--LIVIEYDFDAYERCSKELYNFLIDSKIFDSVFPVSIDEVLLDATTYCSNSF 523 Query: 113 -----CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + + D + IR V + T V VG + LAKLA AK + Sbjct: 524 SDSTFEQRVHDLSKMIRERVYELTSCPVSVGASYNVLLAKLALRKAKPDGQFQLF----- 578 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAM----GIKTVLDLADTDIRFIRKHF-NVVL 222 + + ++ + V+D+ G+G S+KL + I T ++ + + Sbjct: 579 --DNVEQFLTDIKVNDLPGVGYSHSEKLQEIMNTSSIPTAGEVRQLSLTKLINVLGEKTG 636 Query: 223 ERTVRELRGEPCLQL------EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 ++ RG + +E ++ + ++G R + A + Sbjct: 637 QKLYNYARGIDSTSINIDLTNKEAVLGRKSVSVDVNYGIRFDTVLQLDDFFMRLAKELYK 696 Query: 277 KLRSEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAAT 327 +L S ++ + + S S +L PT D + + Sbjct: 697 RLISLGICGSQVTLKLAKRAAGAPVNPPKYLGMGRCDFVSKSSRLGIPTNDWGVVGSELK 756 Query: 328 RSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + V + Sbjct: 757 SLYRMSQVPVQDLRGIAVTMTRLEDVD 783 >UniRef50_C5SGU5 DNA-directed DNA polymerase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SGU5_9CAUL Length = 425 Score = 221 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 86/402 (21%), Positives = 151/402 (37%), Gaps = 30/402 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+N+F+ASCE P L G+P++V+ + C IA + EAK LG+K G K Sbjct: 17 WLYLDMNSFFASCEQQADPCLRGRPLIVVPVDSEYTCAIAASQEAKRLGIKTGTQVKIAK 76 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TD 118 + + + + Y + +R++ ++ + P +I SIDE C L G Sbjct: 77 QICPD--LKVVQARPDEYVRIHHRILEEVDHVIPVEKICSIDEVACRLMGPETVEAAARA 134 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 G I+ +L LT +G+A ++ LAK A K + ++ + Sbjct: 135 LGHRIQRRILSNIGECLTASIGLAPSRMLAKTAADMQKPLGM------TVLRRDQLPGPL 188 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCL 235 + + D GIG +L GI L +R+ + + ++ LRG Sbjct: 189 LDIDIGDFPGIGPATKARLFRAGISDPRQLWHLSPSRMRQLWGGIGGDQFWYALRGVDPP 248 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++E + I S + + R A+ +LR C + I+ Sbjct: 249 EIET---ERGSISHSHVLAVELRPVEAARAVARRLTAKCGSRLRRMGYKCGGLHLSIR-- 303 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQ 353 G + + +L T DS ++ AA D + +K V Sbjct: 304 -----GTQEGRAQAERLFMATADSFRMLEAADALWDVCVRTLNQTSIKKVSVTCMRLVPA 358 Query: 354 GVAQLNLFD---DNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 A +LF P +L+ +D LN + G+ + Sbjct: 359 DTA-PDLFGYSPAADEDPRHMRLLEAIDALNQRFGKDRISIG 399 >UniRef50_B5X367 DNA polymerase iota n=1 Tax=Salmo salar RepID=B5X367_SALSA Length = 757 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 71/402 (17%), Positives = 134/402 (33%), Gaps = 58/402 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P L P+ + ++ N A+ LGV K+ Sbjct: 46 VILHFDLDCFYAQVEMIRNPALRNVPLGI--QQKYIIVTCNYVARDLGVTKLMLVTDAKE 103 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-------- 112 + +V + Y + S +V L P VE DE F D+T + Sbjct: 104 KCPQLVLVKGE-DLTHYRETSYKVTELLMSFCPLVERLGFDENFMDITEMVERRMEQTPE 162 Query: 113 -------------------------CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + E+RA + + LT GIA +K LAK Sbjct: 163 SAHYSYEGHVYSLDTSDAKVMVHPLLAVGSHIAAELRAEIHSKLGLTGCAGIATSKLLAK 222 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALP-VDDVWGIGRRISKKLDAMGIKTVLDL 206 L K Q+ T E + +M +L + V G+G + +K+L A+G+ V DL Sbjct: 223 LVAGTFKPNQQTTLL------PESVKDIMGSLNGLRKVPGVGHQTAKRLQALGLVGVQDL 276 Query: 207 ADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + + + F V +R G + Q + SF ++++ + Q Sbjct: 277 QLFPLADLVREFGVSTAQRLQNLALGIDDTPVTPTGAP-QSLSDEDSF-KKMSSTNEVWQ 334 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT--------- 316 + + +++ + + + I+ A N+ + S + Sbjct: 335 KVKDLLSSLLDRMHKDGRQPFTLRLTIRRYS-ATNKWFSRESRQCPIPNHIGQKITSGSC 393 Query: 317 QDSRDIINAATRSLDAIW--QAGHRYQKAGVMLGDFFSQGVA 356 ++ A + + V + ++ A Sbjct: 394 DALAQLVTMAMKLFHKMVATNTAFHLTLLNVCFSNLQAKCAA 435 >UniRef50_Q0F3E1 ImpB/MucB/SamB family protein n=2 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3E1_9PROT Length = 366 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 91/361 (25%), Positives = 156/361 (43%), Gaps = 16/361 (4%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 +IA+ +AKA G+K G P + K L S+++ Y +S ++ S L SP +E Sbjct: 1 MIAKTYDAKAAGIKTGMPIWDAKKLMPHATY--LSADFRFYGLISEKMFSILRRYSPDME 58 Query: 97 IYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 +YSIDE F DL G R D +IR V + +TV VG++ T+ LAK+A+ K Sbjct: 59 VYSIDEGFLDLNGTRQLWKKDYKGIAHDIRRAVHREVGITVSVGVSVTRILAKIASEYNK 118 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 V + + + + + DV GIGR L+ I T +D + DI I Sbjct: 119 PNG------VTIVPSSMIQLFLKRVKLSDVCGIGRNRLATLNKFSIHTPMDFVNADIEVI 172 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 ++ E++G + LE A + + + S GE + ++ + + +R Sbjct: 173 KQLLGKAGTDLWHEMKGTMAIGLELHAQLPKSMARTASMGEVTGNRKTIISHLIRHTSRL 232 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 A +L ++ + I+ F++ F+ SA PT + + + + ++ Sbjct: 233 ATELVTKRLLTKRITIFLRLKDFS------SLSAQADFEYPTNNYFRLSRSVQAMMADLY 286 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 Q Y+ G++ + + +LF + MD +N K GRGTL AG Sbjct: 287 QPNELYRACGIIAESITNAEDSMPDLFGVMKTDAKQASIFATMDDINKKYGRGTLRVAGA 346 Query: 395 G 395 Sbjct: 347 H 347 >UniRef50_B9DUB9 ImpB/mucB/samB family n=26 Tax=root RepID=B9DUB9_STRU0 Length = 475 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 82/453 (18%), Positives = 165/453 (36%), Gaps = 55/453 (12%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVV---LSNNDGCVIARNAEAKA----------- 46 A D+ +FYAS E + R + V N++G ++A + K Sbjct: 14 IAFVDMKSFYASIECIDRGLSPLRTSLCVMSRADNSNGLILASSPTFKRVFGKSNVGRSY 73 Query: 47 ---LGVKMGDPWFKQKDL---------------FRRCGVVCFSSNYELYADMSNRVMSTL 88 + ++ + + ++ S + Y + + ++ Sbjct: 74 DLPFNIHTRRFNYRVAQREGWKVTTDFVNYIESWAKHTLI-VSPRMDRYIEKNLQIQHIF 132 Query: 89 EELSP--RVEIYSIDEAFCDLTGVRNCRDLT----------DFGREIRATVLQRTHLTVG 136 E + + YSIDE+F DL+ N + I+ + + T + Sbjct: 133 HEFASPQDILTYSIDESFLDLSSSINYFIPSNELTRKEKLDALADRIQYRIWKETGIIST 192 Query: 137 VGIA-QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 VG++ LAKLA K+ + + S + + K+ + D WGIG R++K+L Sbjct: 193 VGLSNSNPLLAKLALDNDAKYAEKMR--ANWSYEDVEEKVWQIKQLTDFWGIGSRMAKRL 250 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE-EFAPTKQEIICSRSFG 254 +GI T+ LA+++ ++K ++ + G + + P + I S+ Sbjct: 251 QKLGIFTIKTLANSNPDLLKKELGIIGLQLWFHANGVDESNVHQPYIPKARGIGNSQILP 310 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 + + A A +LR + + ++ F+ S +P + Sbjct: 311 RDYILQSDIELVLKEMAEHVARRLRRKQKKATTVALFVGYSKGQSGKPINAQMK----ID 366 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 P ++ I ++ GH ++ GV Q + +LFDD + QL Sbjct: 367 PASSNKIISQTVIMLFRKHYK-GHIVRQIGVRCDGLVDQSLEVFSLFDDYEQKEKENQLE 425 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 +DT+ + G +L A ++ +R+ L Sbjct: 426 ATIDTIRDQFGVLSLQKASSLLEASRVAERSQL 458 >UniRef50_A6DEG1 DNA-directed DNA polymerase n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DEG1_9PROT Length = 404 Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats. Identities = 78/426 (18%), Positives = 153/426 (35%), Gaps = 60/426 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL------------------------------ 30 M D++AF+ S L GKP VV+ Sbjct: 1 MKIHLDLDAFFVSAHRTKDKSLIGKPAVVVKTHDKEIFELKKTKVLNLNKGAFTGDIIVT 60 Query: 31 ----SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 N G ++ + EA+ G+K G + K ++ + +Y LY +S ++ Sbjct: 61 NQELEENRGIIVTASYEAREFGIKTGMTLLEAKKIYP--NLTVIKPDYHLYHLLSYKLKL 118 Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 L + P +E +SIDE F DL G + +++ F ++ + + L + +GIA++K A Sbjct: 119 FLRKKIPLIEQFSIDEFFGDLEGWVDEKNVLKFCYNLKQEIYDKFSLPISIGIAKSKWSA 178 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 KLA AK + + + + + GIG+RI ++L + GI T+ DL Sbjct: 179 KLATSFAKPNGVFKV--------DDVYEFIKNIDIAKFPGIGKRIERRLKSRGILTLGDL 230 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + + + + + + GE ++ E ++ + SR F I D + + Sbjct: 231 VKNKEYIL--SWGKMGDVLYKRVIGEDNEEVFERED-RKSVGISRRFDV-IYDREEIMRR 286 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 I A + + F I+ ++ + + + Sbjct: 287 IKILCRFLAFLVTKKKLNPTFYYLKIRYKNGQKSKAHLKVER-------IFNELLLKEIM 339 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 + + + +++ F NLFD +E+L ++ + K G Sbjct: 340 SFLFLRVDEYDDGIVSISLVVSRF----KRVSNLFD-YEKDIKNEKLNKAINKIREKYGV 394 Query: 387 GTLYFA 392 + Sbjct: 395 DIMVSG 400 >UniRef50_B3RS03 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RS03_TRIAD Length = 653 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 82/413 (19%), Positives = 134/413 (32%), Gaps = 75/413 (18%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P L KP+ V ++ N A+ GV+ P F K L Sbjct: 88 IVHVDMDAFYAAIEIRDNPSLADKPMAVGGTG--MMLTSNYIARRYGVRAAMPGFIGKRL 145 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV-------------------------- 95 +V N YA S V + L E P Sbjct: 146 CPD--LVFVKPNSAKYAQASKEVRAILAEYDPNFASVSLDEAYMDLTEYLEGRKCTFPSS 203 Query: 96 --------------------EIYSIDEAFCD----------LTGVRNCRDLTDFGREIRA 125 E+ D + V + D REIR Sbjct: 204 HVEFTVPQQDLTEDMLKILNEVAPPTVDGVDSYNNCSSNSSIRKVSFGHTIEDVMREIRF 263 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + ++T LT GI K LAK+ + K + ++ + M LP + Sbjct: 264 KINRKTKLTASAGIGPNKMLAKICSDWKKPNGQFK----VEFTRDKIIEFMRQLPTRKIS 319 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ 245 GIG+ + L+ + I +L D NV + + G ++ ++ Sbjct: 320 GIGKVSERLLNEIEISNCKELYDKRDLIYLLFSNVSTKFFLAVAMGIGSNEVSSKNYQRK 379 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYG 305 I C R+FGE I+ M A ++ E+ R ++ +KT F + + Sbjct: 380 SISCERTFGE-ISRLADMLVKCQKLCDNLANHMKKENITGRCLTVKLKTVAFEVKQ---- 434 Query: 306 NSASVKLLTPTQDSRDIINAATRSLD----AIWQAGHRYQKAGVMLGDFFSQG 354 SV L T + ++ N A+ + A R + G+ + Sbjct: 435 --RSVSLKHHTNSTTEMFNIASEVIRSERLACQPERLRLRLMGIKMSTLKRHE 485 >UniRef50_D0L509 DNA-directed DNA polymerase n=2 Tax=Corynebacterineae RepID=D0L509_GORB4 Length = 371 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 85/368 (23%), Positives = 131/368 (35%), Gaps = 24/368 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNN-----DGCVIARNAEAKALGVKMGDPWFK 57 D++ F S E + P+L PV+V N V + EA+ +GV G P Sbjct: 13 LHVDLDQFQVSVERLRSPELVDVPVIVGGNGDPTEARKVVTCASYEARDVGVHAGMPLRA 72 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL- 116 V + Y S VM L VE++ DEA+ + + Sbjct: 73 AYRKLPDA--VYLPLDMGAYDAASAEVMDVLRAHGHPVEVWGWDEAYLGVGPAGSEIAAP 130 Query: 117 -----TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ---RQTGGVVDLSN 168 TD +R + R LT VGI+ K AK+A AK+ G V L + Sbjct: 131 DDAAITDLAIRLREDIRARCGLTSCVGISDNKQRAKMATGFAKRPPEPDPTGGSKVFLLD 190 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVR 227 LM P D+W +G + + KL GI+TV DL + F Sbjct: 191 GRNWLDLMGDRPTRDLWSVGPKTAAKLSGAGIETVRDLIAAPRDDLIAIFGPHQGNWLYV 250 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 RG + + SR+F + + D+ R A+ S +++ E + Sbjct: 251 LCRGGGDATITAEPWLARSHSKSRTFPQDLVDFDEKRSAVGSLLRELLDQVIVEERLPFR 310 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 ++ ++T+ F Y + S KL PT + T L A + GV L Sbjct: 311 VAVTVRTATF------YTRTKSRKLREPTTSFDVLEPEVTGLLAKF-DADRPVRLLGVRL 363 Query: 348 GDFFSQGV 355 + Sbjct: 364 DLVTEEEQ 371 >UniRef50_C4R1P8 Deoxycytidyl transferase, forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p n=1 Tax=Pichia pastoris GS115 RepID=C4R1P8_PICPG Length = 958 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 68/398 (17%), Positives = 133/398 (33%), Gaps = 33/398 (8%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWF 56 + D + F+A+ + PD+ +P+ V G V + N A+ GV G Sbjct: 295 IIMHIDFDCFFAAVSALSHPDIDFANEPIAVSHGGKGSSDVSSCNYAARKFGVSNGMWVN 354 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-VEIYSIDEAFCDLTGVRNCRD 115 + +L + +++LY + S L + P + S+DEA L+ + + Sbjct: 355 RALELCPE--LKILDYDFKLYEEKSKIFYEELTRIEPDCIFPVSVDEALIGLSSIDDEES 412 Query: 116 -LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 L + ++R + T TV +G + LAKL AK G+ Sbjct: 413 TLLNICEKLRNKIYVLTGCTVSIGASYNVLLAKLCLRKAKPN-----GIFFFFQPNNVGN 467 Query: 175 LMSALPVDDVWGIGRRISKKLDAM---GIK---TVLDLADTDIRFIRKHFN-VVLERTVR 227 + +PV + GIGR+I +L G K T+ +L+ + K F + Sbjct: 468 FLKNIPVKQLPGIGRKIEDRLSNHLNKGSKETVTISNLSSVSRDTMVKFFGIKTGTKLFG 527 Query: 228 ELRGEPCLQLE----EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 +G ++ ++ I ++G R + + + A ++L Sbjct: 528 YCQGLDDTDIDISKNPSKFIRKSISIDVNWGIRFEKQTQVDEFLSRVADHICQRLLRLGF 587 Query: 284 YCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 + + + S S L PT++ I I Sbjct: 588 VGARLMLKLARRTKGAPIDPPKYLGMGLCDFLSKSTNLGAPTREVGLIATELKSLYRIIG 647 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 A + V + + + D + +++ Sbjct: 648 VAIADLRGVSVTISELQKCDSDATSAVDQKQLQFEAKK 685 >UniRef50_A8IAM0 DNA polymerase kappa (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8IAM0_CHLRE Length = 429 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 70/355 (19%), Positives = 126/355 (35%), Gaps = 26/355 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ +P+L PV V + N A+ GV+ P F K L Sbjct: 90 WLHVDMDCFYAAVHEREQPELKRLPVAVGGMG--MISTANYVARRFGVRSAMPGFIGKRL 147 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDF 119 + +V ++ Y + + V ++L P E +DEA+ D+TG + Sbjct: 148 CPK--LVFVKPDFAKYTEAAAVVRGAFKQLDPDFESGGLDEAYLDVTGYCTRTATSGEEA 205 Query: 120 GREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+R V + + LT VG+A K LAK+ + K + + + Sbjct: 206 ATELRRLVKEVSGGLTCSVGVACNKMLAKICSDINKPDGQYVLPA----SRAAVMSFLDT 261 Query: 179 LPVDDVWGIGRRISKKLDA-MGIKTVLD-LADTDIRFIRKHFNVVLE-RTVRELRGEPCL 235 LPV + IG+ + L +G+ T LA + F+ + G Sbjct: 262 LPVRKIPCIGKVTEQVLQGVLGVSTCGQLLAPASRCRLPLLFSEAAAGFFLEAALGLAPT 321 Query: 236 QLEE-----FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + P ++ + R+F ++ + E R I+ Sbjct: 322 RHGPKTDTSVDPGRKGLSHERTF-RNMSAPAEQEAMAKQLVEALVADMAEEGIEGRNITL 380 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 +K S F ++ + + + + DI+ A R L A R + Sbjct: 381 KLKLSTFEVH------TRAATMPRHVRTVSDILPAVLRLLRAEMPVTLRLMGVRM 429 >UniRef50_A5EBX2 DNA polymerase IV (Pol IV 3) n=2 Tax=Bradyrhizobiaceae RepID=A5EBX2_BRASB Length = 330 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 73/360 (20%), Positives = 122/360 (33%), Gaps = 62/360 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P L GKPV V + G V A + EA+A GV+ K Sbjct: 28 IIHIDMDAFYASVEQRDNPGLRGKPVAVGGSKERGVVAAASYEARAFGVRSAMRSVTAKR 87 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + V TD Sbjct: 88 NMQDIPV------------------------------------------------ATDIA 99 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IRA +L+ T LT GI+ K LAKLA+ K + + + + LP Sbjct: 100 TAIRAKILRETGLTASAGISYNKFLAKLASDHRKPNGQF------VITPKMGPAFVEQLP 153 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V GIG + K++ +GI T +D+ + F+ HF RG + Sbjct: 154 VGKFHGIGPATNAKMNRLGIFTGMDMRNQTRGFMNAHFGKAGAYYYWVSRGVDERPVR-A 212 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ + +F +T + ++ + + S + R ++ +K S F + Sbjct: 213 NRIRKSVGAENTFSGDLTGFAALVAELEPLIDKVWGHCESTGNFGRTVTLKVKFSDFQI- 271 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S + +P +D+ L+ + GV L ++ + L Sbjct: 272 -----ITRSRSVASPISSRQDLNRLTLGLLECEMPIPKSVRLLGVSLSSLQAEAEGEPQL 326 >UniRef50_C2D8D4 Possible DNA-directed DNA polymerase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8D4_9ACTN Length = 466 Score = 218 bits (554), Expect = 4e-55, Method: Composition-based stats. Identities = 71/427 (16%), Positives = 131/427 (30%), Gaps = 28/427 (6%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + D+ FYAS E R + + +VV + +A KA GV+ ++ Sbjct: 39 YMCIDLKTFYASVECADRGLNPFTTNLVVADPDRGEGTICLAVTPALKAQGVRNRCRVYE 98 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRD 115 + + Y D+S R+ S E+ + YSIDE F + + Sbjct: 99 IPK---DITYLKVKPRMQHYVDVSARIRSIYEQFCAPCDIFPYSIDECFIYIAPYIKRYN 155 Query: 116 L--TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + + + V ++ H+ GI LAK+A K G++ R Sbjct: 156 MSSQQIAQMLIDAVYEQEHICATAGIGSNMFLAKIAMDIIAKHNNAHMGILT--KTLFYR 213 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + P+ D+WGIG ++KL G+ + + + + F + + G Sbjct: 214 DIWHHRPLTDIWGIGSSTAQKLARYGVFDLHGVCGIPNEIMLREFGIGAHTLIHHAWGLD 273 Query: 234 CLQLEE---FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + P Q I + + + +L E C I+ Sbjct: 274 LCTITSIKAYKPQHQSISNGQVLMRD-YSEAEAKSICKEMIYDSCLRLIEERNTCSCITL 332 Query: 291 FIKT-----------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 + L + S L T + D Sbjct: 333 EVMYTNTPLAQINSIDSVYLKNRQHTLHCSHTLSYHTASRSILEQILDTLWDTRVDKDRL 392 Query: 340 YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +K + LG+ Q LF+ + +L + K G+ +L + Sbjct: 393 IRKICITLGNLKPQAQVTPTLFEGDESHTNEYKLAHATLAVKHKYGKNSLLRGTSLLPHA 452 Query: 400 WQMKRAM 406 +R Sbjct: 453 TGRQRNQ 459 >UniRef50_D0A851 DNA polymerase kappa, putative n=17 Tax=Trypanosoma brucei RepID=D0A851_TRYBG Length = 572 Score = 217 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 70/366 (19%), Positives = 131/366 (35%), Gaps = 29/366 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ E P+ P+ + + + N A+ G++ G P F + Sbjct: 135 YIHLDMDMFYAAVEIKKHPEYATIPLAIGTMTR--LQTANYIARGRGIRQGMPGFLALKI 192 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD----LT 117 ++ +++ Y + SN V + E P + +DE +++ + Sbjct: 193 CP--NLLILPPDFDAYNEESNTVRRIVAEYDPNYIVVGLDELALEVSAYIERFEGTKTAE 250 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D E+R V T LT GI T LAK+A++ K + ++L E + Sbjct: 251 DVASELRVRVFGETKLTASAGIGPTAALAKIASNINKPNGQHD---LNLHTREDVMTYVR 307 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L + V G+G+ L +GI T+ D+ + + N + + G Sbjct: 308 DLGLRSVPGVGKVTEALLKGLGITTLSDIYNRRVELCYILHNNLFRFLLGASIGIMQWPD 367 Query: 238 E-----------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 ++ I RS M++ + + A E++R CR Sbjct: 368 AATAANTENCEGATGEQRKAISSERSITTP-RTKEGMQEMVDTVFNGAYEEMRKSEIMCR 426 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 IS I+ + + + + L+ + DS + A + GV Sbjct: 427 RISLTIRWASYRYQQY------TKSLIQHSDDSATLRRAVDELMLPHAAKYSEMCLLGVR 480 Query: 347 LGDFFS 352 L D S Sbjct: 481 LSDLIS 486 >UniRef50_B6K5D4 DNA polymerase IV n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K5D4_SCHJY Length = 1006 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 72/364 (19%), Positives = 123/364 (33%), Gaps = 23/364 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQKDL 61 D + F+AS T RP+L G+PV V + + N A+ GVK G + Sbjct: 342 FHVDFDCFFASVLTRDRPELQGRPVAVAHGTKNSEIASCNYAARDFGVKNGMFVNTARSK 401 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-VEIYSIDEAFCDLTG-VRNCRDLTDF 119 + +++ + ++ L + +++ S+DEA D+T N + Sbjct: 402 CPELEL--VDYDFDAFESVARTFYQILSHIQHTAIKVVSVDEAVLDMTDIFTNDDEAIKT 459 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 I+ +VL++T TV VGI LA+LA AK L N + L Sbjct: 460 AESIQTSVLEQTRCTVSVGIGPNLLLARLALRKAKPRGIY------LLNEAVAGDYLKTL 513 Query: 180 PVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 V ++ G+G +K L +KTV DL + K F RG L Sbjct: 514 TVRELPGVGWAQEQKLLLRYKVKTVSDLRSISRESLMKDFGASFGAHLYSIARGHDETLL 573 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST------- 290 +E + I ++G R + + ++R H + + Sbjct: 574 KEDM-IRSSISVDVNWGVRFIFKQDVVDFLGRLCEELVSRMRDCHSRLQQLQLRVLKRAK 632 Query: 291 --FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 +T + + S PT D+ + A + G+ Sbjct: 633 HASFETLKYLGCGEVDTLTKSAFFNEPTDDTALLTKKCVVLFHACSIDAGEIRGIGLQAL 692 Query: 349 DFFS 352 Sbjct: 693 KLSD 696 >UniRef50_B8P0X5 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R RepID=B8P0X5_POSPM Length = 527 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 68/354 (19%), Positives = 130/354 (36%), Gaps = 40/354 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E + P L GK + EA+ GV+ G P F K L Sbjct: 92 IVHVDMDAFYASVELLDDPSLEGKAFA------------SYEARKYGVRSGMPSFIAKKL 139 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DF 119 ++ +++ Y ++S +VM+ P + DE + ++T + LT + Sbjct: 140 CPD--LILVENHFHRYMELSKKVMNIFRRYDPSMCAAGCDEGYLNITAYCRDQQLTADEC 197 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R++R TV Q T LTV GIA K K + T + M L Sbjct: 198 VRQMRETVYQETKLTVSAGIAPNK---------NKPNGQFTLDF----EPRAIKAFMRNL 244 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + + G+GR + LD++GIKT D+ + L+ ++ G ++ Sbjct: 245 SIRKIPGVGRVNERLLDSIGIKTCGDIYTHRVVVSLMDKEFGLQFLLQTYLGIASNVVQP 304 Query: 240 -FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ I R+F + + ++ + AA + S + ++ K + Sbjct: 305 GQREERKSIGAERTF-HPLGNQDAILCKLEEVAAELESDMTSGGWTGKTVTLKFKLDTYQ 363 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + + + ++ + A + + + G+ + Sbjct: 364 V------FTRAKSFDRWVSTKKEDLYAVKLLMPEM---PLTLRLIGLRVTKLKD 408 >UniRef50_B7GAF1 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GAF1_PHATR Length = 1125 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 75/426 (17%), Positives = 141/426 (33%), Gaps = 69/426 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND------------------GCVIARNAE 43 D++ F+AS P+ KPV + N N E Sbjct: 450 VMHVDMDCFFASVVLRKFPEYRDKPVAISHNGQSDDSSRTNGVLQVSKDSTSECATCNYE 509 Query: 44 AKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR----VEIYS 99 A+ G+K G + K L +V +++ Y +++ +V L E + R VE S Sbjct: 510 ARKYGIKKGMYLGRAKILCPE--LVVLQYDFDGYEEVAEQVTDILFEHASRFDGTVEQVS 567 Query: 100 IDEAFCDL-----TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 DE++ +L V IR + + T T VG+++ K LAKLA K Sbjct: 568 CDESYIELFLSDDPTVTAQEQAASLAEMIRQQIWEATQCTATVGVSKNKLLAKLATDKVK 627 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLAD---TDI 211 + E R+L+ L + + GIG R +KL + T+ D+ + Sbjct: 628 PNRSHLV--------ESHRELLQDLELRCLHGIGYRTDRKLAGEELVTIQDVWNLGDHAE 679 Query: 212 RFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSR----------------SFG 254 + + ++ GE ++ ++ I ++G Sbjct: 680 SELSRILGPGLGKKIFGFCNGEDDRPVQAA--ERKTIGAENRYSLVCSTYPFFVYKCNYG 737 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK--------TSPFALNEPYYGN 306 R + I A ++++ + ++ IK F + + Sbjct: 738 VRFDGPYGVDYMIDGLAKEVSKRMENVGTKGIRVTLKIKQKKAAAPPPPKFLGHGSCHNL 797 Query: 307 SASV--KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 S S+ + PT++ +I + + + G++L L + D N Sbjct: 798 SKSIDTRNSVPTREWAEISHLCQAMFVELQVDLEDVRGMGIVLSKLTPDMGTALKMPDSN 857 Query: 365 APRPGS 370 Sbjct: 858 QCMRKW 863 >UniRef50_Q1Q0T1 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0T1_9BACT Length = 348 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 74/328 (22%), Positives = 136/328 (41%), Gaps = 29/328 (8%) Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFGREIRATVLQRTH-LTVGVGIAQTKTL 145 +P +E+YS+DE F D+ G + ++I+ + + LT +GIA K L Sbjct: 21 YSRYTPAIEVYSVDEVFLDIAGSIPLFNSIEHIAKKIKQDIHKHLGRLTCSIGIAPNKLL 80 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD 205 AKL + K + + + R L+ LPV ++WGIG +++K L A+GI T + Sbjct: 81 AKLGSDMKKPDG------LFIIEEKDIRSLLENLPVQELWGIGPKLAKHLAAIGITTCGE 134 Query: 206 LADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK--QEIICSRSFGERITDYPSM 263 L + ++ F ++ ER V +G + + + S + + I D ++ Sbjct: 135 LGRAQVTQLKHTFGIIGERLVLIAQGIDDSPVIPSEKESDAKSVGHSMTLEKDILDKETI 194 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII 323 + I + ++R R ++ I+ S F+ + S + TP D +I Sbjct: 195 ERMILQLSEMVGRRMRKGGYSGRTVTLTIRYSDFS------TLTKSKTIGTPINDGLNIY 248 Query: 324 NAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 A L+A + H + GV L + Q+ LF ++++ VMD +N + Sbjct: 249 LVACDILNAT-RPCHPIRLLGVCLSNLHK-DYTQIPLFPA---ERTKQKVVRVMDEINNR 303 Query: 384 EGRGTLYFAGQG--------IQQQWQMK 403 G ++ I W+ K Sbjct: 304 YGEFSITSGTLMNRYHHKGVISPAWRPK 331 >UniRef50_A5E4H3 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E4H3_LODEL Length = 1301 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 70/389 (17%), Positives = 130/389 (33%), Gaps = 39/389 (10%) Query: 1 MFALCDVNAFYASCETVFRPDLW--GKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + P+L P+ V + V + N A+ GV+ G + Sbjct: 536 IIMHIDFDCFFATASCLKHPNLDIDRDPIAVGHGGETSDVASCNYVARKYGVRNGMWFRL 595 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCRD 115 + L + +E+Y S+ + L + + SIDE D + + Sbjct: 596 AQALCP--NLTLLDYEFEIYEKCSSEFYNYLVTSDYFDTIFPVSIDEVLVDASSYCFKSE 653 Query: 116 ------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 +T+ IR V Q T +V +G + LAKLA AK + Sbjct: 654 KPIEEAVTELCSLIRKHVFQLTKCSVSIGASFNVLLAKLAIKRAKPNGQFFL-------H 706 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT---VLDLADTDIRFIRKHF-NVVLERT 225 + K + +P+ D+ G G+ I +KL+ KT +LD+ + + + Sbjct: 707 KDIEKELFEVPIKDLPGFGKGILEKLEPEIDKTNPKILDIINLPRSRLILLVGEKTGTKL 766 Query: 226 VRELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 RG +E E ++ I +FG R + + A E++ Sbjct: 767 HEYARGIDNTSIEVDTSNPEAVLGRKSISVDVNFGIRFDTVEELDEFFMRLARELYERMV 826 Query: 280 SEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 + ++ + T+ F + S +L T D I N Sbjct: 827 NLGLCGSILTLKLAKRAPGADVVTAKFLGLGQVEFVNKSSRLGVATNDWGVIGNEIKVLY 886 Query: 331 DAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 I + V + + + Sbjct: 887 RMINIPVKDLRGISVSMTKLKDVDSMKSS 915 >UniRef50_UPI0000D5778B PREDICTED: similar to DNA polymerase eta n=1 Tax=Tribolium castaneum RepID=UPI0000D5778B Length = 679 Score = 214 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 81/435 (18%), Positives = 143/435 (32%), Gaps = 68/435 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY E P L GKP+ V+ G +IA N A+ GV F+ Sbjct: 7 VVVLVDMDCFYCQVEEKLNPALEGKPIAVVQYNAWQGGGIIAVNYPARDEGVTRHMRGFE 66 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K +V ++ Y D RV L +P ++ S+DEA+ D+T + Sbjct: 67 AKKKCPSINLVQVPELRGKADLTKYRDAGKRVADVLLTFTPLLQRASVDEAYLDITEIVE 126 Query: 113 CR---------------------DLTDFGR-----------------------EIRATVL 128 R +L DF EIR V Sbjct: 127 KRIEKGLDDLTLINLSNTFVVGCELEDFLHNAITNKEYSIPNLKLAVGGLVTEEIRREVF 186 Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG 188 + T GIA K LAKL K ++ + E K P++ V +G Sbjct: 187 KVTGYKCSAGIAHNKILAKLVCSLHKPNKQ------TILPQEEVEKFFETTPINKVKNLG 240 Query: 189 RRISKKL-DAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQE 246 + + L + + T+ LA + + + ++ RG + + Sbjct: 241 GKFGQTLSEDFHVTTMGQLAKIPEKLLVQKYDEKTGNWLHNIARGIDMEPVTT-KLIAKS 299 Query: 247 IICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 I C ++F + +++ + AA +E+L + + + FA Sbjct: 300 IACCKNFPGKTALVTEENVQHWLGKLAAEMSERLDKDLKENNRRA-KQIIVSFAQEVNKK 358 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAG---HRYQKAGVMLGDFFSQ-GVAQLNL 360 ++ + + + I AA + + + + G+ F V Q+ Sbjct: 359 DVHSTRTHPLVSYNEQKIAQAAFEVVKRFCRKSDGTYHLKFLGLNASSFDDIKNVRQITS 418 Query: 361 FDDNAPRPGSEQLMT 375 F P + L Sbjct: 419 FFQVGPNQPKKSLEK 433 >UniRef50_C4XZD9 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XZD9_CLAL4 Length = 1124 Score = 213 bits (543), Expect = 7e-54, Method: Composition-based stats. Identities = 64/408 (15%), Positives = 131/408 (32%), Gaps = 43/408 (10%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + P+L P+ V V + N A+A GV G Sbjct: 426 IIMHIDFDCFFATISALAHPNLDINKDPIAVSHGGKSSDVASCNYVARAKGVSNGMWLGT 485 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCRD 115 K ++ Y SN+ + L + + + SIDE D+T N D Sbjct: 486 AKTHCPELN--VLDYDFVAYESASNKFYNYLIGKNVFDTIFPVSIDEVLVDVTSFCNQGD 543 Query: 116 L----TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + EIR+ + + T V +G ++ LAKLA AK + + Sbjct: 544 IVKNVESLSSEIRSDIYKLTKCPVSIGASKNVLLAKLATRKAKPRGQFYLY-------DD 596 Query: 172 QRKLMSALPVDDVWGIGRRISKKL-DAMGIKT---VLDLADTDIRFIRKHF-NVVLERTV 226 + L + D+ G+GR ++ KL + M + + + + + + F + Sbjct: 597 IESFLDDLTLKDLPGVGRGLTAKLAEEMDCGSQVLIRHVKSLPLDKLIRIFGEKTGSKIF 656 Query: 227 RELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG + E ++ + ++G R + + + + + ++L Sbjct: 657 QNCRGIDTTSISLDFSSVESLLGRKSVSVDVNYGIRFDTFEQVETFLMNLSKELYKRLSD 716 Query: 281 EHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 ++ + + S S +L PT D + + Sbjct: 717 LKLCGSSLTLKLAKRHPNAPVNPPKYMGMGLCTFLSKSSRLGIPTNDWGIVGSEIRSLYR 776 Query: 332 AIWQAGHRYQKAGVMLGDFFSQG----VAQLNL-FDDNAPRPGSEQLM 374 + + + + Q L F+ + Sbjct: 777 MLNVPPQELRGIAISMTKLQDIEQMKSHRQRTLEFNRAKNMRRQVKAN 824 >UniRef50_A6QA22 DNA polymerase IV n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA22_SULNB Length = 422 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 83/444 (18%), Positives = 161/444 (36%), Gaps = 71/444 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 MF D+++F+AS E L G P+ V S + Sbjct: 1 MFLHIDIDSFFASAERTVDSSLKGIPMAVGSRSNLEIFNRKRTNIRLMNDNSGAFVTPVF 60 Query: 34 ----------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 G + + EA+A GVK P + L + +V Sbjct: 61 YSDREKTFDSYFVDRVEGKEKIRGIITTASYEARAYGVKTAMPIAQALQLCPQ--MVVVP 118 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 SNY Y S+++ + + + P+VE +SIDE F D++G ++ F +E++A +++R Sbjct: 119 SNYPRYHRFSHQIHAFMMKEMPKVEQFSIDEFFADVSGWIEDENVYAFAQELKAKMIERF 178 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 + V +GI++ K +AKLA +AK + + + +P+ GIGR Sbjct: 179 DIPVSIGISKAKWIAKLATESAKPFGVYEV--------KDIDAYIEDMPIKAFPGIGRGF 230 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 K+L+ IKT+ D+ + + + + + G C + E ++ I SR Sbjct: 231 QKRLEDRYIKTLGDVKR--NKSLFYSWKKPGIQLYHRVTGT-CNEGIESRGERKSIGISR 287 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 +F + D +++ I A + + + + + Sbjct: 288 TFD-PLYDPHEVKRRIMIMARHITYMVMAIEVNPTTFYLKVNYEYGIRAKKSETVNRLF- 345 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 + + + + + G K + + +F L+L D N + Sbjct: 346 ------SEQLFKSELSTMFEEVMLPGKGAVKLTLNVSNFTMHHARTLSLLDLND-DISAH 398 Query: 372 QLMTVMDTLNAKEGRGTLYFAGQG 395 L + +L + G + A + Sbjct: 399 ALTCHIHSLREQFGLDIVKTADEL 422 >UniRef50_C4Q7Z3 Terminal deoxycytidyl transferase rev1, putative n=1 Tax=Schistosoma mansoni RepID=C4Q7Z3_SCHMA Length = 1001 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 66/452 (14%), Positives = 145/452 (32%), Gaps = 95/452 (21%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------VIARNA 42 + D++ F+ S RP+L KP+ + V + + Sbjct: 363 IIFHIDMDCFFVSVSLRNRPELEDKPIAITHAKSSRGSVNDIRSSNKHAESMSEVASCSY 422 Query: 43 EAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE 102 A+ GVK G + K L ++ ++E Y +S + ST+ + ++ S DE Sbjct: 423 TARHAGVKNGMLLGRAKQLCPD--LIVLPYDFEAYKAVSELLYSTISRFTRDIQAVSCDE 480 Query: 103 AFCDLTGVRNCRDLTDFGREIRATVLQRT----------------------HLTVGVGIA 140 + D T + + + ++ + + T T +G Sbjct: 481 LYADCTELLIYSNENEIKPKLHDSNWEATYQIINPLILGGYIRELVRDITGGCTASIGFG 540 Query: 141 QTKTLAKLANHAAKKWQRQT-----GGVVDLSNLE------------------------- 170 +K LA+LA AK + GG + + Sbjct: 541 TSKLLARLATKKAKPNGQYWLLGRSGGACPKLDRQTKNESWRWYSSDENIEQLETHSECE 600 Query: 171 ---RQRKLMSALPVDDVWGIGRRIS-KKLDAMGIKTVLDL-ADTDIRFIRKHF-NVVLER 224 + + + LP+ ++ IGR ++ K A KT L + I R Sbjct: 601 LTGDEYQWLCNLPLTEIPNIGRSLAGKIFQAFDAKTCGQLMSKVSHNQITSLLGKKTGNR 660 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR----- 279 RG+ L+ + + S ++G R++ + + S + ++R Sbjct: 661 VYMACRGKDLDSLQFEK-EYKSVSASMNYGIRLSSRSELEALVQSLCEELSSRMRNIKMS 719 Query: 280 --SEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 +E + ++ + TS + + + ++++ T D+ + A + Sbjct: 720 SMNEGCVGKSLTIKLYLRLPNAPVQTSKYMGHGLCSITNHTIQMTEHTADATVLYRYAVK 779 Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 ++ + + G+ + G + Sbjct: 780 TVYRLCPEPEDLRGIGLQVHQLQQGGSRVNGM 811 >UniRef50_B9WGP7 DNA repair protein, putative (Deoxycytidyl transferase, putative) n=3 Tax=Candida RepID=B9WGP7_CANDC Length = 1119 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 67/390 (17%), Positives = 130/390 (33%), Gaps = 41/390 (10%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + RPDL +P+ V + + N A+ GVK G + + Sbjct: 397 VIMHIDFDCFFATASCLKRPDLDMNKQPIAVSHGGKTSDIASCNYVARKHGVKNGMWFIQ 456 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCRD 115 L ++ +E Y S + L + + SIDE D T + Sbjct: 457 ATKLCPD--LILLPYEFESYEKFSTEFYNYLFTSKFFDSIFPVSIDEVLVDATSYCHSGV 514 Query: 116 L------TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + IR V + T+ V +G + LAKLA AK + Sbjct: 515 GDSVSLVNELATRIRKDVFRLTNCPVSIGASTNVLLAKLALKKAKPNGQFYLF------- 567 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT----VLDLADTDIRFIRKHF-NVVLER 224 + K + ++ + D+ G GR I +KLD+ +++ + D+ + + + + Sbjct: 568 DDTEKFLQSIYIKDLPGFGRGILEKLDSE-VQSSKPRIKDVISIPKQRLVQLLGEKTGTK 626 Query: 225 TVRELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 RG +E E ++ + +FG R + + + + ++L Sbjct: 627 LFEYARGIDQTSIEIDANNPEAVLGRKSVSVDVNFGIRFDTVEELDEFLMRLSRELYQRL 686 Query: 279 RSEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 S ++ + F + S KL PT D I N Sbjct: 687 VSLGICGSSLTLKLAKRAEGARVNPPKFLGMGLCDFVNKSSKLGVPTNDWGIIGNEVKVL 746 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + + + + + Sbjct: 747 YRMVNIPVKELRGIAITISKLVDAESVKSS 776 >UniRef50_A3ZXX8 ImpB/MucB/SamB family protein n=2 Tax=Planctomycetaceae RepID=A3ZXX8_9PLAN Length = 407 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 78/399 (19%), Positives = 153/399 (38%), Gaps = 27/399 (6%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFR 63 D+N+++AS E RP+L +PV V+ + C+IA + +AK GVK+G + + L Sbjct: 10 DMNSYFASVEQQLRPELRKQPVGVVPLDTDSTCIIAASYDAKRSGVKVGTKVYDARRLCP 69 Query: 64 RCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDFGRE 122 ++ + ++Y M +R+++++E+ +P IYSIDE L G Sbjct: 70 GIQLI--KARPDVYVRMHHRLLASVEKCAPIERIYSIDEWTIRLLGADRQLEQARRLAYR 127 Query: 123 IRATVLQRTHLT--VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 I+ V L +GIA T+ LAK+A K + E + + LP Sbjct: 128 IKRHVAHEIGLWMSCSIGIAATRLLAKIAAGLEKPHG------LTALPQEALPERIEHLP 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEE 239 + + G+ I ++L G+ + +L + + + + + ++ R L G + Sbjct: 182 LTKLNGVNVGIERRLHQHGVTNIRELWNLNRDEMTRAWGSISGSRWWAGLHGVDEPEPPT 241 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q + + + + A++LR Y + +K Sbjct: 242 R---RQSMSHGNVLDPQFRTADGAHCILVKLICKLAQRLRRSGYYANVLQLSLKDVRGGR 298 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 E + + QD+ ++ + + + K V + D + Sbjct: 299 FE-------TKTPIPCLQDTPSLLLQFEKLWKSRPLSNTPLLKVDVCVSDLRLASQVTRS 351 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 LF++ L V+D + + G L+F Q Sbjct: 352 LFEELEQPCK---LSAVLDEITDRWGPSALFFGSIHRYQ 387 >UniRef50_Q5JLR9 Os01g0757800 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q5JLR9_ORYSJ Length = 642 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 74/427 (17%), Positives = 140/427 (32%), Gaps = 81/427 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E P+L G+P V+ ND G +IA + EA+ GVK + Sbjct: 13 VIAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K + +V ++ +Y + V++ L + E SIDE + DLT Sbjct: 73 AKMVCPSINLVQVPVARDKADLNVYRSAGSEVVTILSTKG-KCERASIDEVYLDLTDAAK 131 Query: 113 CRDLTD----------------------------------------------------FG 120 L Sbjct: 132 EMLLESPPELLELIFEEATKSNILGLPSDVSNREDSVRAWLCRADADYQDKLLSCGAIIV 191 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++R VL+ T T GIA K LAKL + K Q+ + + + +LP Sbjct: 192 AQLRVKVLEETQFTCSAGIAHNKMLAKLVSGMHKPAQQ------TVVPSSAVQDFLVSLP 245 Query: 181 VDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 + + +G ++ L +G+ TV DL +++++ V + RG ++E Sbjct: 246 IKKMKQLGGKLGSSLQDDLGVNTVGDLLSFTEDKLQEYYGVNTGTWLWKIARGISGEEVE 305 Query: 239 EFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEK----LRSEHQYCRFISTFI 292 + + C ++F + + S++ + +E+ L + + ++ + Sbjct: 306 DRLLP-KSHGCGKTFPGPKALKNNASVKTWLDRLCEELSERIQSDLNQNKRIAQTLTLYA 364 Query: 293 KTSPFAL-NEPYYGNSASVKLLTPT----QDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + + S S L T +D+ + + V Sbjct: 365 RACKKNKSDSIKKFPSKSCPLRYGTVKIQEDAMKLFESGLHDFLGSQNTKWSITSLSVSA 424 Query: 348 GDFFSQG 354 F Sbjct: 425 SKIFDIP 431 >UniRef50_UPI0000E48503 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48503 Length = 642 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 76/413 (18%), Positives = 136/413 (32%), Gaps = 56/413 (13%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++ FYA E + P L KP+ + V+ N A+A GV + Sbjct: 67 IVHIDLDCFYAQVEMLRNPTLRDKPLGI--QQKNIVVTTNYVARARGVSKLSYIKEALIK 124 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR---------- 111 +V + Y + S +V LE+ P VE DE F D+T + Sbjct: 125 CPDLVLVSGE-DLTNYRETSTKVTELLEQFCPLVERLGFDENFMDVTKLVESRLTSTDSK 183 Query: 112 -------------------------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 + +E+R T+ + LT G+A K LA Sbjct: 184 KLVHIGHSYESDAQIATQCQCGCRDRLTMGSHIAKEMRDTLKSKLGLTSCAGVATNKLLA 243 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSA-LPVDDVWGIGRRISKKLDAMGIKTVLD 205 KL K + + E + + + GIG KKL MGI+ + + Sbjct: 244 KLVGAHHKPNDQ------TVLFSEWTDSFIQTFTKLRQIPGIGHSSGKKLKGMGIQNLEE 297 Query: 206 LADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 L T + + F E +R G + P Q + SF +++ P+ + Sbjct: 298 LRPTPVSTLADQFGKQQAETMLRLAHGVDDTPVVSKGPP-QSLSDEDSF-KKVGTLPAAK 355 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIK-TSPFALNEPYYGNSASVKLLTPTQDS---R 320 + + ++L+S+ + + ++ P + + S L D Sbjct: 356 EMMTGLIKNLIKRLQSDGRTPYTMRLTVRKYVPGSWHRESRQTGISPNLFQKHDDPSFLE 415 Query: 321 DIINAATRSLDAIWQAGHRYQ--KAGVMLGDFFSQ--GVAQLNLFDDNAPRPG 369 ++ A L + + + + S+ A + F A +P Sbjct: 416 QLLEVAVGLLQKLIDTNRPFHLTLINICFTNLRSKVTKGAIDSFFSKPAVKPK 468 >UniRef50_UPI0000167505 COG0389: Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Bacillus anthracis str. A2012 RepID=UPI0000167505 Length = 318 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 67/331 (20%), Positives = 129/331 (38%), Gaps = 17/331 (5%) Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + L + +++ SIDE + D+T + + I+ +L L +GIA Sbjct: 1 MFQILSRFTEKIQPVSIDEGYLDITDCYALGSPLEIAKMIQQALLTELQLPCSIGIAPNL 60 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 LAK A+ K + + +++ LPV + GIG + ++KL+ + I+T+ Sbjct: 61 FLAKTASDMKKPLG------ITVLRKRDIPEMIWPLPVGAMHGIGEKTAEKLNDIHIQTI 114 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP-TKQEIICSRSFGERITDYPS 262 LA + IR R +G +++ + + S +F + + + Sbjct: 115 EQLAKGNEHIIRAKIGKHGVDLQRRAKGMDDREVDPSQMGQHKSVGNSMTFSKDMDEEKE 174 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + + + +++L+ I IK + S +L + RDI Sbjct: 175 LLDMLQRLSKSVSKRLQKRTLVSYNIQIMIKYHD------RRTVTRSKQLKNAIWEERDI 228 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV--AQLNLFDDNAPRPGSEQLMTVMDTL 380 AA+R W G + GV + + QL+LF E L+ V+D + Sbjct: 229 FQAASRLWKQHWD-GDSVRLLGVTATEIEWKTESVKQLDLFS-FEEDAKEEPLLAVIDQI 286 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 N K G L Q +++Q + + L ++ Sbjct: 287 NDKYGMPLLQRGSQLLRKQEKSFQQKLESKF 317 >UniRef50_A6X194 DNA-directed DNA polymerase n=5 Tax=Alphaproteobacteria RepID=A6X194_OCHA4 Length = 424 Score = 211 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 86/403 (21%), Positives = 152/403 (37%), Gaps = 27/403 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVL---SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 D + F+AS E L G+P+ V+ + VIA + EAK GVK P + K Sbjct: 10 LYLDFDGFFASVEQQCDRRLRGRPIGVVPFEGTDRTAVIACSKEAKNFGVKNVMPIKEAK 69 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L ++ +LY N ++ +E + SIDE C L RD Sbjct: 70 RLCPD--LILVPQKPDLYRRAHNALLCEIETVIAIDTAKSIDELTCVLDDSGK-RDPELL 126 Query: 120 GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAK---KWQRQTGGVVDLSNLERQRK 174 I++ + +T +G A + LAK+A A K K + G + + Sbjct: 127 AARIKSAISNNIGQFITCSIGFAANRQLAKIACKAGKEETKRRGSYGNGLAIWWPTIMPD 186 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEP 233 + + ++D+ G+G ++K+L G+ T L + +RK +N V ER L G Sbjct: 187 PLLRVELEDIPGVGSNMAKRLYRNGVFTTTQLYALQPKHMRKIWNSVNGERLWYALHGYD 246 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 ++ + + R + +AA +LR E+ Y + ++ Sbjct: 247 ---IQAPSQQRGMFGHGRVLPPDARSITGAYEISRLLLTKAARRLRRENFYAAGLWLWLS 303 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDF 350 + +Y L D + I++A + G + GV L D Sbjct: 304 VRDGSWFGKHY--------LPVVNDDQAILSALRLLWQRVREDHPRGVTIFRVGVTLYDL 355 Query: 351 FSQGVAQLNLF-DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 Q+++ +D+A R E+ +D +N+K + Sbjct: 356 SPADERQMDMLNNDDAERQKWEKANNAVDAINSKYSGTIVSMG 398 >UniRef50_B3QD61 DNA-directed DNA polymerase n=6 Tax=cellular organisms RepID=B3QD61_RHOPT Length = 412 Score = 210 bits (535), Expect = 6e-53, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 10/208 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P L GKPV V + G V A + EA+ GV+ P K Sbjct: 23 IIHVDMDAFYASVEQRDDPALRGKPVAVGGSRERGVVAAASYEARKFGVRSAMPSVTAKR 82 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDF 119 ++ +E+Y +S ++ E + +E S+DEA+ D+T ++N D Sbjct: 83 QCPD--LIFVKPRFEVYKAISQQIREIFAEHTAIIEPLSLDEAYLDVTENLQNIPLARDI 140 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IRA + + T L GI+ K LAKLA+ K + + + E + L Sbjct: 141 ALAIRAKIKEVTGLNASAGISYNKFLAKLASDHRKPNGQY------VISPEMGPSFVEGL 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLA 207 PV GIG + K +A+GI+T D+ Sbjct: 195 PVGKFHGIGPATAAKFNALGIRTGSDIR 222 >UniRef50_D2JWS9 Putative DNA-directed polymerase kappa n=1 Tax=Filobasidiella depauperata RepID=D2JWS9_9TREE Length = 570 Score = 210 bits (535), Expect = 8e-53, Method: Composition-based stats. Identities = 63/316 (19%), Positives = 117/316 (37%), Gaps = 29/316 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E P L K V G + + EA+ GV+ G F K L Sbjct: 101 IIHVDMDAFYASVEVQRDPSLKNKAFGVG---RGVLTTASYEARKFGVRSGMAGFIAKKL 157 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 ++ ++++LY S V LE+ + + S+DE + + Sbjct: 158 CP--NIILTDTHFDLYIAASKSVREILEQYDENLMMASLDEGYL---------------K 200 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKL---ANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +R V + T++T+ GIA + LAK+ + K + + + M Sbjct: 201 HLRNQVEKETNMTISAGIAPNRMLAKMGKICSDKNKPNGQYEMNF----ERSKIVRFMRD 256 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G GR + L+++G+K+ D+ D + + + R G + Sbjct: 257 LPVRKIPGFGRVTERYLESLGVKSCGDIYDKRAELLVMNHWLGFRGLCRTYLGIADNNVT 316 Query: 239 EFAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + R+F + D + + S L + +S F+ ++ Sbjct: 317 PRKREERKSVGVERTFRNKTND-EDIMNTLSSIVDELERDLERLRTRAKSVSKFVSSAKD 375 Query: 298 ALNEPYYGNSASVKLL 313 L + L Sbjct: 376 ILPIAQDLLQRELPLC 391 >UniRef50_A7SBP1 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7SBP1_NEMVE Length = 403 Score = 210 bits (534), Expect = 8e-53, Method: Composition-based stats. Identities = 74/406 (18%), Positives = 134/406 (33%), Gaps = 61/406 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P L +PV V + ++ N A+A+G+K + K Sbjct: 4 VIVHIDIDCFYAQVEMIRNPCLRDRPVGV--SQKHILVTCNYVARAMGLKKLISLAEAKK 61 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--------- 111 ++ + Y + S+RV L + RVE +DE + D++ + Sbjct: 62 KCPDLVIINGE-DLTKYREFSSRVTKLLRRFALRVERLGLDENYVDVSELVQERMKHAPR 120 Query: 112 -----------------------------NCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 + E+R + LT GIA Sbjct: 121 GSYIAVGCIYGDNILKGSSNEVCPCGCHERLTVGSVIASELRKAIFDEIGLTTCAGIAHN 180 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 K LAK+A K ++ L ER LM LPV V GIGR +L ++GI T Sbjct: 181 KLLAKIAGEQNKPNKQ------TLLYTERVEGLMGLLPVRKVPGIGRSTCARLGSLGITT 234 Query: 203 VLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 + +L + + + FN R G Q+ + + I S+ + Sbjct: 235 IAELQECSKKALLNEFNSQEVRILHALSHGADDSQVSTDSMP-KSISEEDSYSN-LCSLE 292 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK------LLTP 315 S++ + ++ + + + + I+ Y S + TP Sbjct: 293 SVKTNLRVLIGNLIPRITEDTGHPQTVRLAIRRG-GQAPGVYKKESRQCPVPDRFAMNTP 351 Query: 316 TQDSR--DIINAATRSLDAIWQAGHR--YQKAGVMLGDFFSQGVAQ 357 + + + + V L +F + + Sbjct: 352 NSSEKINVLFGTVFGLFHKLVDVSKSFQVRVLNVCLSNFQRRPERK 397 >UniRef50_C3DVJ9 DNA-damage repair protein n=5 Tax=Bacillus RepID=C3DVJ9_BACTS Length = 393 Score = 210 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 74/412 (17%), Positives = 143/412 (34%), Gaps = 63/412 (15%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D+ +F+AS V Sbjct: 33 IFCLDLVSFFASVSCVKLG----------------------------------------- 51 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR--DLT 117 + + Y SN + + + P YSIDE F + + + Sbjct: 52 --------YDPQMDTYIRCSNYIAKIILQYVPPEYYFQYSIDECFIQVDNIFSLFADSPR 103 Query: 118 DFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 DF +++ + ++T ++ VGI + +AK+A + K + + + K+ Sbjct: 104 DFALKLQQEIYRKTKGISAAVGIGKNMIMAKVALDISAKNSPDL--IAEWDYNDVPTKIW 161 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 S P+ WGI + KL+ GI T+ DLA +++++K F V+ G + Sbjct: 162 SIRPLSSFWGISAKTEAKLNRKGIHTIGDLAHYPLKYLQKEFGVIGTDLHLHSHGIDFSR 221 Query: 237 L-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + + P I S+ + + ++R +H+ R + + S Sbjct: 222 ITDTYKPKSTSIGKSQILMRD-YKIEEIPVILLEQIEEVCYRMRMKHKLARTVQFSVGYS 280 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 G SV PT + DI + + L + G + + L + ++GV Sbjct: 281 R----SYGGGFRKSVTFERPTCMTMDIYHICLKYLMEL-HTGEPIRSISISLTNLVNEGV 335 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 Q+++FDD R +L +D + + G+ ++ A Q R L Sbjct: 336 EQISIFDDIKKREQQIKLTRALDEIRTRFGKNSILRAVSYTPQSTVRYRNTL 387 >UniRef50_C1E418 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1E418_9CHLO Length = 410 Score = 210 bits (534), Expect = 9e-53, Method: Composition-based stats. Identities = 74/346 (21%), Positives = 136/346 (39%), Gaps = 20/346 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++AF+A+C T+ RP+L P+ V + + N A+ GV+ P F L Sbjct: 83 WIHVDMDAFFAACHTLERPELASVPMAVGGMS--MISTANYVARKAGVRSAMPGFVAVKL 140 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDF 119 +V ++ELY + + + S+DEA+ D+T + D + Sbjct: 141 CP--ALVFVRQDFELYQKYAAMLREVWRVYDKEFDCGSLDEAYLDVTEFMSRTGMDGGEV 198 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++R+ V +T LT G+A T+ LAK+ + K + + E +S L Sbjct: 199 AAKLRSDVETKTRLTCSAGVAPTRRLAKICSDWNKPNGQFVLER----SREAVISFLSDL 254 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV V G+G+ + KL A I+T L + ++ G + Sbjct: 255 PVRKVGGVGKVLEGKLSAFQIRTCGQLRQSLNVIAAVFTPATIDFLFSVALGTG-TEQRP 313 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + R+F +D + + A A++L+ E+ + ++ IK S F + Sbjct: 314 PDAQRKGLGHERTFA-PTSDPRFIEAKLHGLAEDVAKELQKENLKAQTVTLKIKKSNFEV 372 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 + + ++ I AA L G + GV Sbjct: 373 MQRQLTV-------PSSNAAKVIAEAAILLLRKERPYG-ALRLVGV 410 >UniRef50_D1J7R2 DNA-damage repair protein MucB n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7R2_MYCHP Length = 418 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 90/403 (22%), Positives = 176/403 (43%), Gaps = 25/403 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+++F+ SCE +L KPVV+ + A + E K LG ++G + Sbjct: 4 IIFHIDMDSFFVSCERSINTNLIDKPVVIAKRYKRSIISAMSYEVKNLGYRVGSSLYTVL 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLE-ELSPRVEIYSIDEAFCDLTGVR-NCRDLT 117 + ++ +Y+LY+ +S ++ L+ + ++EIYSIDE + D + N + Sbjct: 64 EKVP--NLLIVEPHYDLYSLISKKIFDYLKNKYCTQLEIYSIDECYIDFSNTVSNWEEAK 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + ++I+ +L+ + +GI+ TK LAK++ + AK + ++ E + Sbjct: 122 NLAQQIKDDILKTFMIPCSIGISFTKFLAKMSTNKAKPSG------ILITKKEDIERNFY 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR-FIRKHFNVVLERTVRELRGEPCLQ 236 +LPV+ ++G+G+ IS++L I T DL + + F+RK F + +L+G Sbjct: 176 SLPVEKIFGVGKNISQQLIKNKISTYKDLLECNNEIFLRKLFKKNFFLFIEQLKGINATD 235 Query: 237 LEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + I + +F E D ++ + A A + + + CR + I+ Sbjct: 236 HI-LNLETKGISNTITFMEKDSDDIVFLKNELFKLARNVANRAVNNNYECRCVEVLIRKQ 294 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--Q 353 S K+ T D I A + +W + G+ + D S Q Sbjct: 295 D------KKWMSEQKKIDFFTNDIDIIFKIALKLFLNLWNEKECLRGLGIRICDLRSIFQ 348 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 Q++LF+DN + + ++++ +NAK L Q + Sbjct: 349 ENKQIDLFEDNNQKS---IVNSILNEVNAKFEGKILITGKQYL 388 >UniRef50_A0LGS2 DNA-directed DNA polymerase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGS2_SYNFM Length = 393 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 71/403 (17%), Positives = 141/403 (34%), Gaps = 18/403 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D+ FYA E + RP+L + +V+ + V N+ A G++ G P + Sbjct: 5 IVHLDIPNFYAVLEELRRPELKKRSMVLAEPSARAIVQGINSNAGKEGIREGMPLAHARR 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDF 119 + RR V+ + + Y + +++ SP VE F DLTG + D Sbjct: 65 MCRR--VLAVAPDLRFYREEHQQILKEFGFFSPLVEGAWPGHYFVDLTGTQRLLGPGPDV 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + + + L +G+A K ++++A+ G ++ + ++ L Sbjct: 123 ACRMERHLATQRRLRARIGLAANKLVSQVASTCIVP------GDLNCIFPGGETSFLAPL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + G+G + +L I+ + LA + + F + R RG + Sbjct: 177 PVTSLPGVGAVTASRLADFNIRRIGQLAALSLEALCGVFGKMGSRLFNVARGIDPTPVLP 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + S D + + A LRS +++ I+ + Sbjct: 237 S-RESPRLVVAHSLERDEIDRDRLEALLFQQVEEAGWALRSHNRHPTRFVLEIRYADGIT 295 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 SA R + ++ ++ + L DF Q + Sbjct: 296 -----ARSAHALFSPAIHADRRLFRVILPVFRQLFNRRIALRRIVLELSDFA-MPFRQAS 349 Query: 360 LFD-DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 LF +++P G L +D + + G + + Q Q Sbjct: 350 LFSREDSPPSGERDLQQALDGIRGRFGNRAISWGNAMSGAQRQ 392 >UniRef50_Q98R22 DNA-DAMAGE REPAIR PROTEIN MUCB n=1 Tax=Mycoplasma pulmonis RepID=Q98R22_MYCPU Length = 425 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 85/415 (20%), Positives = 177/415 (42%), Gaps = 24/415 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 + D ++++ S R DL+GK +VV N+ + + + EAKA G+K+G P +K K Sbjct: 13 VIFHLDADSYFVSAIRTIRKDLFGKSMVVAHNHKRAIITSASYEAKAKGIKVGMPLYKAK 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGV-RNCRDLT 117 + VV ++ELY+++S+ + + L E + +++IYSIDE F D + + + Sbjct: 73 LIDP--NVVVADYSFELYSNLSSNIFNFLYENYTKKIQIYSIDEFFIDASDLVVKKGSIL 130 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +E++ ++ + +G+ +AK++ K + + ++ +K + Sbjct: 131 KLAQEMQKAIMDNFSIPFSIGVGPNLWMAKMSTSINKPYG------ITITKRSDLKKNIY 184 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF--IRKHFNVVLERTVRELRGEPCL 235 + + + GIG+ KL + IKT+ D ++ + K + + L+ E +G Sbjct: 185 SQDISEYVGIGKSGLAKLSHLNIKTIGDFCNSVFAQGALEKIYGIKLKTIKEECQGISND 244 Query: 236 QLEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 Q++ Q + SF + + S+ +KL++ Y ++ ++ Sbjct: 245 QIDTSQNDAQSLGSEISFSHDDLDERSSIFNYFKLICELLEKKLKNRGIYANTLTVKLRD 304 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + S +KL S+DI+N + W + G+ L DF Sbjct: 305 QNYKWKTKRKKYS--IKLFE----SQDIMNRVIEIFNQFWDEKK-LRGLGISLSDFGDIY 357 Query: 355 VAQL--NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + L +LFD E++ ++ ++N + R +YF + Q + Sbjct: 358 QSDLSFDLFDQ-KYDSKKEKINALIKSINKDKTRKVIYFLNEYQDSQIHKSKQSK 411 >UniRef50_A3TNV0 Putative uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TNV0_9MICO Length = 347 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 86/358 (24%), Positives = 149/358 (41%), Gaps = 24/358 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AF+AS E P L G+P+VV V + EA+ALGV G P F+ Sbjct: 8 VLIHADADAFFASVEQRDHPHLRGRPMVVGPQ---VVACASYEARALGVHAGMPLFQAVR 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 + ++ + Y S +M+ EL+P VE S++EAF D++ + + + Sbjct: 65 RWPE--LLVAPFRAQAYESASADLMALFRELTPLVEPGSMEEAFLDVSALDGGSVEEAGR 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+RA + L V G+A+ K AKLA+ AK + + + E + ++ Sbjct: 123 LAGELRARAHRELGLPVSCGVARAKLFAKLASRRAKPDG------LVVVDAETEARVRPR 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI--RKHFNVVLERTVRELRGEPCLQ 236 LPV D+WG+G + KL G+ V DLA + + R+ + + + G Sbjct: 177 LPVADLWGVGPMTTDKLHDAGVVLVADLAGWTVDGLVERRVAKAMAKNLIAIRDGVDDAT 236 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 ++ ++ I RS G ++++A+ RA +L + + + ++ Sbjct: 237 IK-LPTARKSISSQRSLGRSTRQRSTVQEALRDNVIRALNRLGDDPRPATRLDVHLRYDD 295 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA--IWQAGHRYQKAGVMLGDFFS 352 L PT+D +I AA +L+ + G GV G Sbjct: 296 DHAVVVPGA------LGEPTRDPATLIGAALAALERTAYEEDGRGVTMVGVTFGLPAP 347 >UniRef50_A8PB46 ImpB/MucB/SamB family protein n=1 Tax=Brugia malayi RepID=A8PB46_BRUMA Length = 500 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 72/369 (19%), Positives = 137/369 (37%), Gaps = 43/369 (11%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVV-----LSNNDGCVIARNAEAKALGVKMGDPW 55 + AL D++ FY E +P L+GKPV V +N G ++A + EA+ G+K G Sbjct: 6 IIALIDMDCFYVQVEQRLQPHLYGKPVAVVQHSSGNNRGGGLLAISYEARPFGIKRGMFP 65 Query: 56 FKQKDLFRRCGVVCFS-------SNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCD 106 + K L + ++ Y D S V L E + R VE S+DEA+ D Sbjct: 66 EQAKTLCSELTLCYVPVGEHVDKADITRYRDASAEVFKVLHEFNSRIIVERASVDEAYLD 125 Query: 107 LTGV-------------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAA 153 LT + D +IR + + T GI +K +AKL Sbjct: 126 LTALVEHIYETTDPSIKLKLIIGADLVEQIRRNIKKSTAFNCSAGIGSSKMIAKLVCSRH 185 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIR 212 K G + E K+ P+++V +G ++ + L + IKT+ +L++ + Sbjct: 186 KP------GQQTVVFNEAIPKVFEYTPINEVRNLGGKLGRALMEKFNIKTMGELSEISMS 239 Query: 213 FIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSY 270 + ++F + G ++ + + S++F + ++ + Sbjct: 240 HLSEYFPAQAKWIYNIAHGIDDEKV-TARDKQSSVAVSKNFPGANALKTDVDVKFWLEGL 298 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 ++L + I+T+ + + T D + + + Sbjct: 299 VKELVKRLIDDQIAN------IRTASTLHIGCTTDIHLTRSMQMKTYDPKALFTSVWAIF 352 Query: 331 DAIWQAGHR 339 I ++G Sbjct: 353 RHINKSGIP 361 >UniRef50_B8BXL1 REV1 protein n=1 Tax=Thalassiosira pseudonana RepID=B8BXL1_THAPS Length = 1148 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 68/394 (17%), Positives = 133/394 (33%), Gaps = 57/394 (14%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC---------------------VIAR 40 L D++ F+AS P +PV V + Sbjct: 456 VLLVDMDCFFASVSLRRYPQYRNQPVAVGHTGTVVLPCNYNNQKIVGTNLKNSSSELSTC 515 Query: 41 NAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTL----EELSPRVE 96 N A+ GV+ G + ++ ++E Y ++S+ V L + +E Sbjct: 516 NYIARKFGVRKGMFLGDAIMVCPD--LIVLPYDFEGYEEVSSIVADELVRYAQRFHGCLE 573 Query: 97 IYSIDEAFCDL---TGVRNCRDLTD----FGREIRATVLQRTHLTVGVGIAQTKTLAKLA 149 S DEA+ +L ++ D +IRA ++ +T T +GI K LAKLA Sbjct: 574 QVSCDEAYLELNLSPDDCEDSNVEDFVKFLAEQIRAYIVNKTECTASIGIGSNKFLAKLA 633 Query: 150 NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT 209 K E + ++ L + D+ GIGR+ KK+ ++TV D+ + Sbjct: 634 ADKVKPDASYLV--------EDWQTFLNGLTLRDLPGIGRKFEKKMTPHHLRTVNDIWEL 685 Query: 210 D---IRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + + + ++ G+ + A + I ++G R + Sbjct: 686 GDSAESILGEIIGRGNALKILQFCGGKDDRAVTPAAR--KSIGAECNYGVRFDGPYGVDY 743 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTS--------PFALNEPYYGNSASVKLLTPTQ 317 + + +++ + + S F + S S+ + T+ Sbjct: 744 MLAGLSKEVEKRMTLAEVRGSKLVLKVMKSRDASKQPGKFLGHGACDSLSKSIDIPL-TR 802 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 S I AA R + + + G+++ Sbjct: 803 KSDAITAAAMRLFEQLSIDECLIRGMGLVVNSLV 836 >UniRef50_B9L8S0 DNA-directed DNA polymerase n=1 Tax=Nautilia profundicola AmH RepID=B9L8S0_NAUPA Length = 412 Score = 208 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 86/436 (19%), Positives = 156/436 (35%), Gaps = 68/436 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 M D+++F+ S + L KPVVV+ N Sbjct: 1 MKIHLDLDSFFVSAHRIEDKTLLNKPVVVVKRNDKEIFKNEKTKLLNLNEGAFTGDLIVG 60 Query: 34 ---------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA 78 G V+ + EA+ LG+K G + ++ + + + NY+LY Sbjct: 61 DEKYDKSYFLENGKVRGIVVTASYEARELGIKTGTTLAEALRIYPK--LTVLTPNYKLYH 118 Query: 79 DMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVG 138 +S ++ LE+ P VE YSIDE F DL G N ++ F + ++ + +R +L V +G Sbjct: 119 ILSYKLKLFLEKKIPLVEQYSIDEFFGDLEGWVNDGEIYGFIKTLKDEIWKRFNLPVSIG 178 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 A++K AKLA AK + + + + +PV+ GIG+RI K++ Sbjct: 179 AAKSKWTAKLATSFAKPDGIKVV--------KNIDEFIENIPVEKFPGIGKRIEKRIKEK 230 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 GI T+ D+ + + + + G ++ ++ I SR F + Sbjct: 231 GILTLGDVKR--EKEYFYSWGKAGVQLYNRVCGTDNEKVI-QKSERKSIGISRRFD-PVY 286 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 D + + I + ++ + F IK ++ + + Sbjct: 287 DRKEIIRRIGILCRYLSFLVKKKKVNPTFYYLSIKYKHSKKSKAHITLDR-------IFN 339 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 + G+ + F NLFD E+L + Sbjct: 340 EMLLKEVMVTLFYRADIEDDYIISLGISVSKFKKVS----NLFD-LEEDRKMEKLNDAIY 394 Query: 379 TLNAKEGRGTLYFAGQ 394 L ++ G L A + Sbjct: 395 KLRSRYGLSALISASE 410 >UniRef50_B3RQD9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RQD9_TRIAD Length = 1014 Score = 208 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 53/330 (16%), Positives = 110/330 (33%), Gaps = 35/330 (10%) Query: 29 VLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTL 88 V + + + N A+ G+ G + L + ++ Y ++S + +TL Sbjct: 390 VEQFSTSEIASCNYVARRYGLHNGMFMGRALQLCPH--LRVVPYEFDKYKEVSKLLYNTL 447 Query: 89 EELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + + S DEA+ D+T + + D IR + +T T GI +A+ Sbjct: 448 ASYTFEIMAISCDEAYIDVTDILQDDYTIQDLASSIRHDIESKTGCTCSAGIGPNLLIAR 507 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 +A AK + + ++ + D+ G+G R+ +KL + ++T DL Sbjct: 508 MATRIAKPNGQHY------VDPANVLTFVANQSLKDLPGVGYRLHRKLKDLNVETCQDLR 561 Query: 208 DTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + +++ F + RG ++ ++ + ++G R M+ Sbjct: 562 KISLPVLQRDFGTKTGLMLYQYCRGIDERPVQ-VDHERKSVSAEINYGIRF---AEMKH- 616 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 R IK + + + S L PT DS I Sbjct: 617 -------------------RSPDASIKPWKYLGHGKCDNYAKSTTLTRPTCDSDIISKEC 657 Query: 327 TRSLDAIW-QAGHRYQKAGVMLGDFFSQGV 355 + + + G+ + Sbjct: 658 MKLFYSFASINVQDVRGMGIQIQRLSPIDE 687 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 16/36 (44%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC 36 + D+++F+ S R DL G PV V + Sbjct: 293 VVMHLDMDSFFVSVAIRDRADLRGLPVAVTHSKGKI 328 >UniRef50_D1I1G6 Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) n=5 Tax=Magnoliophyta RepID=D1I1G6_VITVI Length = 773 Score = 207 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 80/441 (18%), Positives = 140/441 (31%), Gaps = 89/441 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E +PDL G P V+ N G +IA + EA+ GVK + Sbjct: 13 IIAHIDMDCFYVQVEQRKQPDLRGLPTAVVQYNSWKGGGLIAVSYEARKFGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K + + +V ++ +Y + + V+S L R E SIDE + DLT Sbjct: 73 AKQVCPQIQLVQVPVARGKADLNVYRNAGSEVVSILARKG-RCERASIDEVYLDLTDAAE 131 Query: 113 CRDLT----------------------------------------------------DFG 120 Sbjct: 132 AMLAEMPPESLEAIDEEALKSHVLGLNEGGNDIKESVRVWLCRSQADHRDKLLACGALIV 191 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 E+R V + T T GIA K LAKLA+ K Q+ + L R L+ +LP Sbjct: 192 AELRMQVFRETEFTCSAGIAHNKMLAKLASAMNKPAQQ------TIVPLSCVRGLLGSLP 245 Query: 181 VDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 + + +G ++ L + +G+ TV DL +++ + + RG ++E Sbjct: 246 IKKMKQLGGKLGSSLQSDLGVNTVGDLLQFSEEKLQECYGINTGTWLWNIARGISGEEVE 305 Query: 239 EFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEKLR----SEHQYCRFISTFI 292 + ++F + S+ + E+LR + ++ Sbjct: 306 SRLL-SKSHGSGKTFPGPKALKTIASVENWLNELCEELDERLRSDLEQNKRIAHTLTLHA 364 Query: 293 K-TSPFALNEPYYGNSASVKLLTPTQ----DSRDIINAATRSL--------DAIWQAGHR 339 + + S S L D+ ++ A R A +G Sbjct: 365 RAYKSNDSDSHKKFPSKSCPLRYGIAKIQEDALNLFQAGLREYLGSCKVKTRANQCSGWS 424 Query: 340 YQKAGVMLGDFFSQGVAQLNL 360 V + ++ Sbjct: 425 ITALSVSASKIVAIPTGTCSI 445 >UniRef50_A9UXX3 Predicted protein (Fragment) n=2 Tax=Eukaryota RepID=A9UXX3_MONBE Length = 456 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 67/381 (17%), Positives = 120/381 (31%), Gaps = 65/381 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + CD +AFYA+ E +P L GKP+ G + + EA+ GV+ P + Sbjct: 90 VIVHCDADAFYAAVELRDQPHLRGKPI--GIGGIGMLSTASYEARKFGVRSAMPGYIALR 147 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ + Y S ++ + + + P S+DEA+ D+T D Sbjct: 148 LCPE--LILVKPRFHAYEAASRQLQAVMAQYDPNFRSVSLDEAYLDITDYMARLTPGDVA 205 Query: 121 -------------------------------------------------REIRATVLQRT 131 ++R + + T Sbjct: 206 QLPPLTTVADPPLVQEANSADSKPGMATDSAGARNLTTLEGRALAARVVHQMRTRMHETT 265 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 LTV GIA + LAK+ + K + ++ ++ +P + GIG+ Sbjct: 266 QLTVSAGIACNRMLAKIGSDQNKPDGQF----CLPADRAAILAFLANMPTRKIPGIGKVT 321 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 + L + I L + + +R G ++ I Sbjct: 322 EQILRELDITNCQALLQQRALLKLLFTPISFDFFMRSALGIASNN-TRKRSERKSIGHET 380 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 +F + P + + A + + R + +KT F + + SV Sbjct: 381 TF-RELNQVPDLEDKCLHLCHKTALDMERKALLGRSVCLKLKTVDFKVKQ------RSVL 433 Query: 312 LLTPTQDSRDIINAATRSLDA 332 L T D I AA L Sbjct: 434 LPAHTADEPVIKRAALGLLHR 454 >UniRef50_B7AW77 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B7AW77_9BACE Length = 519 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 85/508 (16%), Positives = 151/508 (29%), Gaps = 104/508 (20%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWF 56 ++ D+ +FYAS E R D +VV + +A + KA G+ F Sbjct: 5 IYIAIDLKSFYASVECRERGLDPLTTNLVVADASRTEKTICLAVSPSLKAYGIPGRARLF 64 Query: 57 KQKDLFRRCG-------------------------------VVCFSSNYELYADMSNRVM 85 + R + LY + S R+ Sbjct: 65 EVVQKVREVNAMRRTAAGGHRLSESSSDAAVIAADPDVAVGYITAPPRMALYMEYSTRIY 124 Query: 86 STLEELSP--RVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQ 141 + + V +YSIDE F D + + ++ V ++T +T GI Sbjct: 125 NIYMKYVAPEDVHVYSIDEVFIDASPYLGTYGITARELASKMIRDVYEQTGITATAGIGT 184 Query: 142 TKTLAKLANHAAKKWQR---QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 L K+A K R + L ++KL + P+ D W +GR +KKL+ Sbjct: 185 NLYLCKIAMDIEAKHARPDEHGVRIAFLDEKAYRKKLWNHRPITDFWRVGRGYAKKLEEK 244 Query: 199 GIKTVLDLADT---------DIRFIRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQE 246 GI T+ D+A + + K F V E + G Q++ + P Sbjct: 245 GICTMGDIARCSVGRPGDFYNEELLYKMFGVNAELLIDHAWGYEPCTMAQIKAYRPESNS 304 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS----------- 295 I + DY R + A + A L + + I Sbjct: 305 IGSGQVLHCP-YDYTGTRLVVREMADQLALDLAGKGLVTDQLVLTIGYDIDNLSNADIAR 363 Query: 296 PFALNEPYYGNSASVK--------LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + + L T SR +I++AT+ + I G ++ + Sbjct: 364 NYHGEVTADRYGRRIPKPAHGTGNLPVCTSSSRILIDSATKLYERITNPGLLIRRINITA 423 Query: 348 GDFFSQGVAQ--------------LNLFDDNAPR----------------PGSEQLMTVM 377 L+LFD +++ + Sbjct: 424 NHVVPHSAEPGISAHNNTTEKYEQLSLFDTPGFDGYDERKKQEDKMQDIIEKDDRMQQAV 483 Query: 378 DTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 + + GR + + ++R Sbjct: 484 LDIKKRYGRNAILKGMNYEEGATTIQRN 511 >UniRef50_A4YEC1 DNA polymerase IV n=18 Tax=Sulfolobaceae RepID=DPO4_METS5 Length = 349 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 81/368 (22%), Positives = 137/368 (37%), Gaps = 27/368 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC-----VIARNAEAKALGVKMGDPW 55 + D + F+A E + P L GKPVVV + V N EA+ LG+K G P Sbjct: 2 IVLFVDFDYFFAQVEEILNPSLKGKPVVVCVYSGRTKDSGAVATSNYEARKLGIKAGMPI 61 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 K K++ V E+Y +S RVM+ + ++EI SIDEA+ D+T D Sbjct: 62 IKAKEI--GKDAVFLPMRKEVYQQVSRRVMNIISGYGDKLEIASIDEAYLDITRRVKDFD 119 Query: 116 -LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + R+++A VL++ L V VGI K +AK+ K + + E + Sbjct: 120 EAKELARKLKAEVLEKERLRVTVGIGPNKVVAKIIADMNKPDG------LGIIYPEEVKD 173 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 + L + V G+G+ + L +GI + D+ + + + Sbjct: 174 FLYNLDISKVPGVGKITEEILRKVGINRLGDVINKSGELVNLVGKSKANYLLSLANNTYH 233 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 +E T + + E D + ++ A K+ + Sbjct: 234 DPVESREITHR--GRYVTLPENTRDLNRILPSLKRSIEEAYSKV--DGIPMEIYVV---- 285 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR-YQKAGVMLGDFFSQ 353 A+ E S R + + A L+ I ++ R ++ GV LG Sbjct: 286 ---AIMEDLDIVSKGKSFKFGVSQDRAL-SVAQELLNKILESDKRKLRRVGVRLGKITKS 341 Query: 354 GVAQLNLF 361 + L Sbjct: 342 STLEDFLH 349 >UniRef50_UPI0000DB76DA PREDICTED: similar to Rev1 CG12189-PA n=1 Tax=Apis mellifera RepID=UPI0000DB76DA Length = 844 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 58/369 (15%), Positives = 112/369 (30%), Gaps = 74/369 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-------CVIARNAEAKALGVKMGD 53 + D++ F+ S +P+L G PV V + + + EA+ GVK G Sbjct: 226 VIMHIDMDCFFVSVGLRDKPELKGLPVAVTHAKGNKNSCSLSEIASCSYEARKAGVKNGM 285 Query: 54 PWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC 113 + + + N+E Y +S + T+ + +E S DE + D T + Sbjct: 286 FLGEALKICPDLRTI--PYNFEGYTKVSYILYDTVASYTLDIEAVSCDEMYADCTKILEE 343 Query: 114 RD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 +F IR + ++T V G + K LA+LA AK + E Sbjct: 344 SGLTPMEFATIIRQEIKEKTGCPVSTGFGRNKLLARLATRKAKPNGQFY------IQQEH 397 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 +S+ V D+ D + ++ IR Sbjct: 398 INNCISSFNVQDLP-------------------DNSKLNLEHIR---------------- 422 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + + ++G R + + +L + R I+ Sbjct: 423 -------------KSVSAEVNYGIRFESNEDAIDFLKKLSHEVYNRLNKANAKGRCITLK 469 Query: 292 I---------KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 + +T F + + S + P D I + + + + Sbjct: 470 VLIRAKEAPKETEKFMGHGLCDYVTKSKNFIAPINDVDIITKEVIILWNQMQKIPEDARG 529 Query: 343 AGVMLGDFF 351 G+ + Sbjct: 530 IGIQISRLE 538 >UniRef50_C6HJM8 DNA damage repair protein Mus42 n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HJM8_AJECH Length = 1111 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 54/380 (14%), Positives = 108/380 (28%), Gaps = 88/380 (23%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+L +PV + + + N A++ G+K G Sbjct: 364 ILHVDFDSFFAAVSLQKHPELVDQPVAIAHGTGPGSEIASCNYPARSFGIKNGMWMKGAL 423 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC------ 113 + + ++ Y + S + + + V+ SIDEA D+T + Sbjct: 424 QMCP--NLKVLPYDFAAYEEASRKFYDVILSIDAVVQSVSIDEALVDITNLCQDAVGSRG 481 Query: 114 ------------RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + +++R +V ++T + VGI A++A AK + Sbjct: 482 RDISEDSIWREQEKADEIAQKLRDSVKEQTGCNISVGIGGNVLQARVALRKAKPAGQFQ- 540 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV 221 + + L V D+ +G Sbjct: 541 -----LKPDAVLDFIGTLAVKDLPEVG--------------------------------- 562 Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 F P ++ + S+G R + + + S +L Sbjct: 563 ------------------FHPPRKSVSAEISWGIRFVNQAQAEEFVQSLCDELHRRLVEN 604 Query: 282 HQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 + ++ I + + SV L T S I A L Sbjct: 605 LVKGKQLTMRIMKRSADAPLEPVKHLGHGKCDTFNKSVNLGVATNASDIIGREAISILRG 664 Query: 333 IWQAGHRYQKAGVMLGDFFS 352 + + GV + Sbjct: 665 FKFSPGDLRGLGVQMTKLEP 684 >UniRef50_C5DG10 KLTH0D01518p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DG10_LACTC Length = 994 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 65/396 (16%), Positives = 122/396 (30%), Gaps = 43/396 (10%) Query: 2 FALCDVNAFYASCETVF--RPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQ 58 D + F+A+ + R DL P+ V N+ + + N A++ GVK G Sbjct: 359 IFHVDFDCFFATVSALSDARYDLSRDPLAVAHGNNSSEIASCNYVARSFGVKNGMWVRSA 418 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + L ++C N+E Y S + L + SIDEA C + + D Sbjct: 419 RRLCP--NLICLPYNFEQYEVNSKLLYQILAGSGFFQMILPISIDEAIC-VKYLDGLPDG 475 Query: 117 TDFGREIRATVLQRT---------HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + + ++ TV +G + + LA+LA AK + + Sbjct: 476 DASAHQQCEAITRQIRRDVFDATNGCTVSIGCSNSLVLARLALKKAKPNGQCVMASL--- 532 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK------TVLDLADTDIRFIR--KHFN 219 + + LP+ D+ G+G I K+ + T+ DL + K Sbjct: 533 EQDSIDAFIEELPLRDLPGVGATIVDKVQQHILFEQTAEPTIGDLKRNSSLQLLASKLGT 592 Query: 220 VVLERTVRELRGEPCLQLEEF------APTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 + L G+ + ++ I ++ R + + I Sbjct: 593 KTGHKLHLFLSGKDDEENSRVLRDPLDYFARKSISVDINYAIRFDTIHEIDEFIDRICEH 652 Query: 274 AAEKLRSEHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 KL ++ + + + + S S + PT ++ I Sbjct: 653 LTTKLGELDMVTPQVTLKVTRRCEHAPIEPAKYLGSGECDTFSRSSRFGVPTCEAGLIST 712 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 S + + V L L Sbjct: 713 EVKSSFRMLGCPPKDLRGIAVQLNKLEKVSDRVCQL 748 >UniRef50_A8IYH8 Deoxycytidyl transferase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IYH8_CHLRE Length = 764 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 70/391 (17%), Positives = 118/391 (30%), Gaps = 77/391 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG----CVIARNAEAKALGVKMGDPWF 56 + D++ F+AS V RP+L G+P+ V +N G V + N A++ G++ Sbjct: 287 VVLHVDMDCFFASVAAVGRPELAGRPLAVCHSNSGKGTGEVSSANYVARSYGIRADMFMG 346 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + K L Y D Sbjct: 347 EAKRLCPD----LAQPQPHTYGD-----------------------------------PA 367 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +RA + T T GI +A+LA AK + G L Sbjct: 368 EALAARLRADIAAATGCTASAGIGPNMLVARLATRRAKPNGQFRGCHTGLV--------- 418 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 G+G + KLD MGI +V L + G+ + Sbjct: 419 ---------GVGWSTADKLDKMGITSVRQLQKALGAKL-------GSDLWAHAHGQDERR 462 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT-- 294 +E ++ + ++G R T + + AA A +L++ R ++ K Sbjct: 463 VEP-PKARKSVGAEVNYGIRFTTEEEAERFMGDLAAEVAARLKTAGVKGRSLTLKAKRRL 521 Query: 295 ------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + F + S S+ L T D+ D+ A L A+ + G+ + Sbjct: 522 AGAPEPAKFMGHGACDNISRSMTLGRFTDDAADLRREAVALLRALAVPAAELRGLGLTVS 581 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 S A + A D Sbjct: 582 RLDSDPAAHTSRPSAPAAAKLQAPPRRAFDA 612 >UniRef50_A4HGJ3 DNA polymerase kappa, putative n=4 Tax=Trypanosomatidae RepID=A4HGJ3_LEIBR Length = 754 Score = 203 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 72/391 (18%), Positives = 130/391 (33%), Gaps = 50/391 (12%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++ FYA+ E P P+ V S + N A+ GV+ G P F Sbjct: 232 IYVHVDMDMFYAAVEMKKNPQYAEVPLGVGSM--AMLSTTNYLARQYGVRSGMPGFIGMR 289 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD----- 115 L + +V +++ S + + P ++ +DE L Sbjct: 290 LCPQ--LVIVPTDFAACRVESAKFKGVVRNYDPAAQVLGMDEIMMRLDDYLAQHHMDATT 347 Query: 116 -------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 E R V + T LT GIA T TLAK+A+ K + V L + Sbjct: 348 HAERFDVAERIIEECRRRVAEVTGLTASAGIAPTPTLAKMASDYKKPNGQFA---VRLFS 404 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 E ++++PV V GIG+ L +GI T+ ++ R E + Sbjct: 405 REAVMDYLASIPVRRVPGIGKSRESILAGLGIHTLGEVYQQRHRLFYILTRKTYEFLLAS 464 Query: 229 LRGEP------------------------CLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 G + E ++ + R+F ++ + ++ Sbjct: 465 AMGVGGMYDSLEAAPPSSAGTTTKTVAALDGESNEDDWRRKSVGQERTF-YKLKNRMELQ 523 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 ++ E L +E C + +K F + + S L T D + Sbjct: 524 AIAHMNLRQSHETLVAEDLLCSQVVLKLKHRSFHVKQ------HSKSLNLYTDDYEVLRR 577 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 A L + +++ G+ L + Sbjct: 578 ALDDLLLPVVDDFAKFRLLGIRLEKLRRRPQ 608 >UniRef50_A0RN38 DNA polymerase IV 1, putative n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RN38_CAMFF Length = 380 Score = 203 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 69/406 (16%), Positives = 148/406 (36%), Gaps = 39/406 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG----------CVIARNAEAKALGVK 50 MF D++ F+ S PDL GK V V N +++ + EA+ LG+ Sbjct: 1 MFLHIDLDCFFVSASRTVNPDLNGKVVAVAGGNKTDIFGDFIESGIIVSASYEARRLGIG 60 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 + ++ ++ +N+ LY +SN + L + + +E YSIDE F +L G Sbjct: 61 CTMHSSIARKIYP--NIIILPTNFNLYKTLSNNLFKLLLDYTDEIEKYSIDEFFLNLKGT 118 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + D +F + ++ + L +GI++TK +AK A + AK + + + Sbjct: 119 KFENDPLNFAKILQNRIKNELKLPSSIGISETKFIAKFATNLAKPSKIKIINDISEI--- 175 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 + G+G L + G+ + D+ + + I + Sbjct: 176 ------QNYEIKMFPGVGASAENFLKSHGVIYIKDV--FNAQKIFAKLGKNGLILYSRIC 227 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G+ Q+ ++ + +R+F + I D + + + + ++ Sbjct: 228 GKSRDQIH-KNRPRKSLCIARTF-KEIRDRNIIEKRLMVLCRYVSFEVFMLGVNPTKFEL 285 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLG 348 IK + + + + ++ ++ + + L + V +G Sbjct: 286 KIKYKN--------NRNINASVTKHSIFTQKLLETSIKELFLKHDKTSDFAITYLSVGVG 337 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 AQ++LFD + + + + K G + G+ Sbjct: 338 GL--NEKAQMSLFDIQ--NKKDKAISDTLAKIRLKYGVNAIKSGGE 379 >UniRef50_C5DV83 ZYRO0D04664p n=1 Tax=Zygosaccharomyces rouxii RepID=C5DV83_ZYGRO Length = 817 Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 66/383 (17%), Positives = 134/383 (34%), Gaps = 30/383 (7%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQK 59 D + F+AS + D+ P+VV + + N EA+ G++ G + Sbjct: 228 VFHIDFDCFFASVSAMANGFDIHADPIVVCHGTKNSDIASCNYEARRYGIRNGMWVGTAE 287 Query: 60 DLFRRCG-VVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNCRDLT 117 + +V +++ + MS R L + V SIDEA C + G + + Sbjct: 288 RMMPGGKRLVRLGYDFDQFELMSKRFYQILHDSQFQLVLPISIDEAVC-IAGNLSHMECD 346 Query: 118 DFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + IR V T TV +G A + LA+LA +K + +L Sbjct: 347 SICQRIREHVSSVTNGCTVSIGCANSLVLARLALKWSKPNGYRIVNCDELD-----ATFW 401 Query: 177 SALPVDDVWGIGRRISKKLDAMG---IKTVLDLADTDIRFIRKHF-NVVLERTVRELRGE 232 S L +DD+ G+GR ++ K+ I + +L + +++ + + +RG+ Sbjct: 402 SNLKIDDLPGVGRSLAYKISEYSNPPIGNLCELRQMTLDSLQRCVGEKMGNKIYLAVRGK 461 Query: 233 PCLQ------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 + + ++ + ++G R + Q I +KL+ ++ Sbjct: 462 DDEESGKIIYDPKQFFQRKSLSIDINWGIRFDTIYEIDQFIDRCTQYLIDKLKELNKKTS 521 Query: 287 FISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 ++ I + + S +L PT + I + ++ Sbjct: 522 QLTLKIMKRSKDESIEPPKYLGMGKCDPFARSTRLGVPTDEFGIITTEIKSTFRSLCCPP 581 Query: 338 HRYQKAGVMLGDFFSQGVAQLNL 360 + + + Q L Sbjct: 582 KELRGIAIQFNKLENSVSNQSKL 604 >UniRef50_B7LX10 Protein impB n=4 Tax=Enterobacteriaceae RepID=B7LX10_ECO55 Length = 326 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 149/265 (56%), Positives = 192/265 (72%), Gaps = 2/265 (0%) Query: 151 HAAKKWQRQTGGV-VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT 209 A K+W + +G V + N R KL+ PV +VWG+GRR+++KL+A+GI T L LA Sbjct: 63 WATKQWPQFSGVVALTAENRNRILKLLGLQPVGEVWGVGRRLTEKLNALGINTALQLAQA 122 Query: 210 DIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICS 269 + FIRK+F+V+LERTVREL GE C+ LEE P KQ+I+CSRSFGERITD +M QA+ Sbjct: 123 NTAFIRKNFSVILERTVRELNGESCISLEEAPPAKQQIVCSRSFGERITDKDAMHQAVVQ 182 Query: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 YA RAAEKLR E QYCR ++TF++TSPFA+ EP Y N+A KL PTQDSRDII AA R+ Sbjct: 183 YAERAAEKLRGERQYCRQVTTFVRTSPFAVKEPCYSNAAVEKLSLPTQDSRDIIAAACRA 242 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 L+ +W+ G+RY KAGVML DF G+AQ LFD+ PR SE+LM +D LN G+G + Sbjct: 243 LNHVWREGYRYMKAGVMLADFTPSGIAQPGLFDEIQPRKNSEKLMKTLDELNQS-GKGKV 301 Query: 390 YFAGQGIQQQWQMKRAMLSPRYTTR 414 +FAG+G +WQMK+ MLSP YTT+ Sbjct: 302 WFAGRGTAPEWQMKQEMLSPSYTTQ 326 >UniRef50_A5BB36 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BB36_VITVI Length = 500 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 14/234 (5%) Query: 9 AFYASCETVFRPDLWGKPVVVLSNNDG----CVIARNAEAKALGVKMGDPWFKQKDLFRR 64 AF + P+L KPV V +N+ + + N A+ GVK G K L Sbjct: 257 AFLSPVVIRXNPELQDKPVAVCHSNNPKGTAEISSANYPARDYGVKAGIFVRDAKALCPH 316 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIR 124 +V F N+E Y +++++ + L + +V+ S DEAF ++ + D IR Sbjct: 317 --LVIFPYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEVMDSKX-GDPELLASIIR 373 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 + + T T GIA +A+LA +AK + +++ + LP+ + Sbjct: 374 KEIFETTGCTASAGIAGNLLMARLATRSAKPNGQCY------IPVDKVDDYLHQLPIKAL 427 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQL 237 GIG + +KL + T L +++ F + RG + Sbjct: 428 PGIGHVLEEKLRRRKVHTCGQLRMISKESLQRDFGTKTGDMLWNYCRGVDNRVV 481 >UniRef50_Q7NUT5 UmuC protein n=1 Tax=Chromobacterium violaceum RepID=Q7NUT5_CHRVO Length = 301 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 109/295 (36%), Positives = 158/295 (53%), Gaps = 5/295 (1%) Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL--SNLERQRKLMSALPVDDVWGI 187 + + V VGI +KTLAKLANH AK+ GV D + LM+ LP VWG+ Sbjct: 9 QIGIPVSVGIGPSKTLAKLANHVAKRVAGWDDGVFDWSWLSPAETDALMARLPAGKVWGV 68 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 G R++ L I T L L D R+++++F+V LERT EL G CL LEE A +Q+I Sbjct: 69 GPRLAAGLAEKRIDTALKLKRADPRWLQRNFSVTLERTAAELNGVSCLSLEEAAQPRQQI 128 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 I SRSFGE+ +D + A+ + ARAAEKLR + R + +TSPF + + Sbjct: 129 ISSRSFGEKTSDLAVLSAAVSHHIARAAEKLREQGSAARLVGVSARTSPFGDDPYHGYT- 187 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 V L P+ D+ ++ AA L A+++ G RYQKAGV+L + + Q +LF Sbjct: 188 -VVPLAQPSDDTLELAAAALAGLRAVYRRGLRYQKAGVVLMELSPRERRQADLFAAAP-D 245 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 P ++LM +D +N G + A + + W+M++ SP YTTR L + Sbjct: 246 PRRQRLMRTLDAINRAYGHSCVKLASEALTPNWEMRQDQRSPCYTTRFDQLPTAR 300 >UniRef50_Q6BS95 DEHA2D10560p n=2 Tax=Debaryomyces hansenii RepID=Q6BS95_DEBHA Length = 1175 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 69/387 (17%), Positives = 124/387 (32%), Gaps = 44/387 (11%) Query: 2 FALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQ 58 D + F+A+ + P+L P+ V + + N A+ GV+ G K Sbjct: 458 ILHVDFDCFFATASCLNHPNLDINKDPIAVTHGGRTSDIASCNYVARKFGVRNGMWSGKA 517 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCRD- 115 K L ++ +++ Y S + L + + SIDE D T Sbjct: 518 KQLCPE--LIQLDYDFDAYERCSAKFYDYLISRGIFDHIFPVSIDEVLLDATSFCLESGR 575 Query: 116 -----LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + + + IR + T+ +V VG + LAKLA AK + E Sbjct: 576 LREDIINELSQTIRKGIFSLTNCSVSVGASHNVLLAKLALKKAKPNGQFYL-------HE 628 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKT-------VLDLADTDIRFIRKHF-NVVL 222 + + + +PV D+ GIG I KL I+ + DL + F Sbjct: 629 KVDEFLDNIPVRDLPGIGNSIKYKLIEE-IQDMSSQEPLIKDLKPFTELQLMNIFGKKTG 687 Query: 223 ERTVRELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 + + RG ++ E ++ + +FG R P + + + + Sbjct: 688 TKLYQFARGIDNSSIKLDLNNSESVLGRKSVSVDVNFGIRFDTVPQVEAFLMNLSKEMYS 747 Query: 277 KLRSEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAAT 327 +L S I+ I + S S KL PT D + + Sbjct: 748 RLISLGMCGSSITLRLAKRAHDAPIDPPKYLGMGLCDFVSKSSKLGVPTNDWGIMGSEIK 807 Query: 328 RSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + + + Sbjct: 808 ALFRMVNVPVKELRGIAITMNKLEDVE 834 >UniRef50_D2BP58 ImpB/MucB/SamB family protein n=7 Tax=Firmicutes RepID=D2BP58_LACLK Length = 488 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 85/460 (18%), Positives = 154/460 (33%), Gaps = 61/460 (13%) Query: 2 FALCDVNAFYASCETV-FRPDLWGKPVVV---LSNNDGCVIARNAEAKA-LGVKMGDPWF 56 DV + YAS E V + + V N G +A + K G+K Sbjct: 20 ILFEDVKSNYASIECVQRNLNPLTTSLCVMSRADNTKGLTLASSPTFKKVFGMKNISRAS 79 Query: 57 K-----------------------QKDLFRRCGVV-----------CFSSNYELYADMSN 82 + V +LY D Sbjct: 80 DLPFIIETRKFNFPQWYRTHTDIYGQRTEPTLQYVAFVESWAKRTWLVPPQMQLYVDYKI 139 Query: 83 RVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCRDL---------TDFGREIRATVLQRT 131 +V L + + YSIDE+F D+T N +++ +L + Sbjct: 140 KVTEILTNYTSIEEIHSYSIDESFLDITESLNFFYPDIRNRYEQMNLIALDLQREILDKL 199 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 L V VG+ LAKLA K + + + KL + + D WGIG+R Sbjct: 200 GLYVTVGMGDNPLLAKLAMDNYAKHNQNMR--ALIRYEDVPSKLWTLPKMTDFWGIGKRT 257 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE-FAPTKQEIICS 250 K+L+ +GI ++ +LA+ D +++ + + G + E + P S Sbjct: 258 EKRLNKLGISSIKELANADPLLLKQKLGTIGLQHFFHANGIDESNVREKYIPKSSSFSNS 317 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 + + I A A +LR + +S ++ A + + Sbjct: 318 QILPRDYHKQKEIELVIKEMAENLAIRLRKGGKMASNLSLYV----GAAASSEHSSIKIS 373 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF---DDNAPR 367 + + TQ+++++ + A R + G ++ G+ V QL+LF ++N Sbjct: 374 RNIEATQNTKELQDLAIRLFREKY-QGGAVRQIGISGNQLSDNSVKQLSLFETVEENQSN 432 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 E L +D + K ++ A + + R L Sbjct: 433 EKQESLQKAIDEIREKFDFLSIQKASSLSEGSRVIYRNKL 472 >UniRef50_A8ZS28 DNA-directed DNA polymerase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS28_DESOH Length = 401 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 74/397 (18%), Positives = 127/397 (31%), Gaps = 20/397 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 +V F + E L +PV++ V + EA A G++ G P Sbjct: 10 IIHINVAHFAVTVEQTLDARLRDRPVLIAPAGAARTPVYDMSQEAFASGIRKGMPVAGAL 69 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE-AFCDLTGVRNCRDLT- 117 R C VV Y + +P VE S D F D+TG Sbjct: 70 KACRDCKVVPLYP--ARYERAMQTIAKYAGAYTPVVEQGSGDGHLFLDVTGTSRLFGPPP 127 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D + + + L +A K +AK+A K + + + Sbjct: 128 DIAWRLERQIKKDFGLAPAWSVAANKLVAKVATRLVKPVGEY------IVCPGDEAPFLE 181 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LP+ + G+ R I V L + ++ F+ + +RG + Sbjct: 182 PLPLGILPGVERSDLDAFAMYHIGRVNQLRPWSLAQLQVAFDTRAQFLFDTIRGIDLSAV 241 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + F E M Q + + LR+ ++ R + S Sbjct: 242 TSGREKEPTVAMEHEFSEDTNQRDQMEQVLYGLVEKGGRALRARQRFARIAGVVVDYSDG 301 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + V + PT + + AA R+L R + ++L Q Sbjct: 302 R------RCARQVSIAPPTANDPALFEAARRALSLAVVRRVRVRYIRLVLRRLL-FPPVQ 354 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 L+LFD + +L+T MD + +K G +Y Sbjct: 355 LDLFDH-DRQERQTRLLTAMDNIRSKFGDSAIYPGRM 390 >UniRef50_B5J6A6 ImpB/MucB/SamB family n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J6A6_9RHOB Length = 465 Score = 200 bits (509), Expect = 8e-50, Method: Composition-based stats. Identities = 84/413 (20%), Positives = 148/413 (35%), Gaps = 33/413 (7%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D ++F+AS E P L G+PV V+ + IA + EAKALGVK K ++ Sbjct: 29 LYLDFDSFFASAEQHLNPYLRGRPVGVVPLDSLHTSCIAVSREAKALGVKSRTTIIKARE 88 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + ++ + +++Y + R++ +E P + SIDE C+L V Sbjct: 89 IIPD--MIFVVARHDVYVRLHKRILDVIETCLPVTHVRSIDEVVCNLLRVEAAEG-EALA 145 Query: 121 REIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++ + LT +G+A T+ AK+A K + L ++ Sbjct: 146 LRLKTAIALAFSDVLTCSIGMAPTELRAKIAAELNKPNGFK------LLPAADMPDALAE 199 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQL 237 + + D+ GI + +L A + L + R + +V ER L G Sbjct: 200 VDLCDLPGISEGMQARLKAAQVHNFTALWALAPKQARAIWGSVEGERFWNGLHG----YH 255 Query: 238 EEFAPTKQEI-ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK--- 293 E PTK+ + SR + + +R A +LR + ++ + Sbjct: 256 TERPPTKKSMFGHSRVLPKDWRNPEKVRVCARLLIESAGRRLRRANMRATKLTLSFRGGG 315 Query: 294 -TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 S L D ++ + A + + VM+ Sbjct: 316 YRSAHESRRDDQNWGWEGNFLPARDDYAFLLALSDGLTWAEQHMAFQPRSVSVMIHGLIV 375 Query: 353 QGVAQLNLF----------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 +G +LF + A R E++ +MD + AK G L G Sbjct: 376 EGEFMTDLFAASPDAASGMSEAASRAKWEKVSDLMDNMRAKFGPHALSLGPPG 428 >UniRef50_A9KJA2 UMUC domain protein DNA-repair protein n=25 Tax=Bacteria RepID=A9KJA2_CLOPH Length = 507 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 77/496 (15%), Positives = 146/496 (29%), Gaps = 92/496 (18%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E + R D +VV + +A + KA G+ F+ Sbjct: 6 YISIDLKSFYASVECIERGLDPLTTNLVVADASRTEKTICLAVSPSLKAYGISGRARLFE 65 Query: 58 QKDLFRR-------------------------------CGVVCFSSNYELYADMSNRVMS 86 + Y + S R+ + Sbjct: 66 VVQKVEEVNAVRLHKAPGRAFSGDSFIDTDLKSSPSISLNYIVAPPRMAYYIEYSTRIYN 125 Query: 87 TLEEL--SPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQT 142 + S + +YSIDE F D T N + ++ VL+ T +T GI Sbjct: 126 IYLKYIASEDIHVYSIDEVFIDATDYLNTYNLSARELATKMILDVLKTTGITATAGIGTN 185 Query: 143 KTLAKLANHAAK---KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 L+K+A + +L + +R L S P+ D W +G+ +KKL+ G Sbjct: 186 LYLSKIAMDIQAKHIPDDNNGMRIAELDEMSYRRALWSHQPLTDFWRVGKGYTKKLEEQG 245 Query: 200 IKTVLDLADT---------DIRFIRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQEI 247 + T+ D+A + + K F + E + G ++ + P+ I Sbjct: 246 LFTMGDIARCSLGKPTDYYNEDLLYKLFGINAELLIDHAWGWEPCTIADIKAYKPSTNSI 305 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS------------ 295 + + + + + L + + + Sbjct: 306 GSGQVL-QCAYTFDKTKLIVREMTDLLVLDLVDKRLVTDQLVLTVGYDIENMTNLKIKKS 364 Query: 296 -------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 S L T ++ I++A T + I ++ + Sbjct: 365 YHGAITTDHYGRTVPKSAHGSANLGRQTSSTKLILDAVTELFERIVDKNLLVRRVNITAN 424 Query: 349 DFFS-------QGVAQLNLF-----------DDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 QLNLF D+ A +++ M + K G+ + Sbjct: 425 HVIDETTVQKTDSFEQLNLFTDYVTENVKKEDEEAELVREKRVQKAMLDIKKKYGKNAIL 484 Query: 391 FAGQGIQQQWQMKRAM 406 + + R Sbjct: 485 KGMNLEEGATTVDRNK 500 >UniRef50_Q6KZW2 DNA polymerase IV n=1 Tax=Picrophilus torridus RepID=DPO4_PICTO Length = 344 Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 18/283 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 M L D + F+A E + P L GKPVVV + G V N EA+ALG+K G P Sbjct: 1 MIMLIDFDYFFAQVEEINDPSLKGKPVVVSVYSGRNERSGAVATSNYEARALGIKSGMPL 60 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 ++ ++ + V + Y S+++M + E S ++EI SIDEA+ D+ G Sbjct: 61 YRALEIGKNR-AVFLPIRKDFYQKYSDKIMDIISEYSEKMEIASIDEAYIDIDGNDCKIG 119 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 EI+ +L T + V +GI K +AK+A AK + + + + Sbjct: 120 ---IANEIKNRILNETGIKVSIGIGINKVIAKMAAEMAKPNGIK------CISADETGEF 170 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPC 234 ++ + ++D+ GIG+ +SK L+ +GI+ + D+ + D+ I+ + Sbjct: 171 LNNIKINDIPGIGKVLSKNLNEIGIEYLRDIKNFDVNKIKSILGESKTNYLYELYENKYF 230 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 +E K+ + E D + + A EK Sbjct: 231 SPVEP--RVKKNFGRYLTLPENTRDIDKIVPYLKKSIDAAYEK 271 >UniRef50_UPI0000D56959 PREDICTED: similar to DNA polymerase iota n=1 Tax=Tribolium castaneum RepID=UPI0000D56959 Length = 537 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 72/399 (18%), Positives = 133/399 (33%), Gaps = 50/399 (12%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++ FYA E P L P+ + V+ N A+ G+K + K L Sbjct: 11 IIHIDLDCFYAQVEMNKNPSLRTVPLGI--QQKNIVVTSNYTAREFGIKKCMLIPEAKKL 68 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV----------- 110 +V + Y S +V + L++ +P VE +DE + D+T + Sbjct: 69 CPSLVLVNGE-DLHDYRQTSYKVTNLLQKYTPLVERLGLDENYLDVTTLINEKLNQKSDL 127 Query: 111 -------------------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 T +EIR + +LT GIA K LAK+A Sbjct: 128 KLVGNVFGDTSDKCECGCTERLIIATTVAQEIRDVIKSELNLTSCAGIAHNKLLAKIAGA 187 Query: 152 AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI 211 K Q+ + ++S +D+ GIGR + ++L +G++T+ +L + D+ Sbjct: 188 RHKPNQQT-----VVFPNSALELILSLNAPNDIPGIGRALFEQLKCIGVETIEELQNVDL 242 Query: 212 RFIRKHFNVVLERTVREL-RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 + + + V EL G ++ Q I S I+ ++ + Sbjct: 243 KRLETVLGQDKAKLVHELSLGIDKSGVKPTGKP-QSIGLEDSC-RSISVETEVKIKLEQL 300 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT------QDSRDIIN 324 R + + + + I ++ N+ + + + I+ Sbjct: 301 LNRLLLLVEEDGRVPKTIKLTVRKFN-KDNKMSHRETRQCNVNPSIFSSSQPNKEAKIMT 359 Query: 325 AATRSLDAIWQAGHRYQ--KAGVMLGDFFSQGVAQLNLF 361 + I Y G+ F L F Sbjct: 360 TIMHLFNRIIDVKKPYHITLLGLSFTKFQEPPKNTLASF 398 >UniRef50_Q6KI15 DNA-damage repair protein n=1 Tax=Mycoplasma mobile RepID=Q6KI15_MYCMO Length = 411 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 77/404 (19%), Positives = 167/404 (41%), Gaps = 24/404 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARN-AEAKALGVKMGDPWFKQKD 60 D ++F+ + RP+L GK V V S +++ EAK G K+ + + Sbjct: 7 IFHIDADSFFVNSIITIRPELKGKEVAVSSTKSSSIVSSLSYEAKQKGAKVPMQMREVRK 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 ++ N++L++ +SN++ L + + ++EI SIDE + D+T + + + + Sbjct: 67 YCP--NIITVLPNFKLFSIISNKIFDYLAKNFTKKLEIASIDECYLDVTDILHNYENKYN 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R+++ V + T + + +GI+ K LAK+A+ AK + ++++ Sbjct: 125 LARKMQEGVYKYTKIPISIGISHNKFLAKMASPLAKPNGIAH------LDKNNFKEILFP 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKH-FNVVLERTVRELRGEPCLQL 237 + + +GIG+ +KL+++ + + DL D K F L G ++L Sbjct: 179 MKISKFYGIGKSSIEKLNSIDVNFIKDLLDESKEASFKRIFKNRWIDIKNNLNGNGSIEL 238 Query: 238 EEFAPTKQEIICSRS-FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + +E+ ++ F + I D + + + + + + I IK Sbjct: 239 DLEHNDVKEMGKEKTFFEQSIDDRNIILKELEKLSEIVSHNAKQRFNAGYVIKVKIKYYN 298 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QG 354 ++ S V L D+ +I A D +W + G+ LG + + Sbjct: 299 LSV------VSMQVSLPFAINDADEIFKNAISLFDKLWDE-KAIKLIGIKLGKLVNLFEE 351 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 Q++LF+ + ++ +++ N +Y A ++ Sbjct: 352 KTQISLFE--EKIMNNSKIDNLINDFNTNFNSRLIYKASNFPKK 393 >UniRef50_Q30PG7 DNA-directed DNA polymerase n=2 Tax=Campylobacterales RepID=Q30PG7_SULDN Length = 444 Score = 197 bits (500), Expect = 7e-49, Method: Composition-based stats. Identities = 76/443 (17%), Positives = 143/443 (32%), Gaps = 68/443 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 M D++ F+ S + P L KPV + + Sbjct: 22 MKIHIDIDCFFVSAARIQEPSLEFKPVAIGGRSDTKIFNKDAKKQAVNFENSGSFVPTFY 81 Query: 34 --------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 G + + EA+A GVK + L ++ + + Sbjct: 82 KAYEERDDDIDAFKDEDGRVRGILTTSSYEARAYGVKTAMSIKEALSLCPH--LIIKAPD 139 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 LY +S+ + L+ P VE SIDE + DL+G + D+ +F +R + T L Sbjct: 140 MSLYQKLSHELHEFLQTKIPLVEQASIDEFYGDLSGWVDDSDVPNFIAALRDEIKSVTKL 199 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 V +G A+T+ +AKL+ AK + + + +PV GIG+ +S+ Sbjct: 200 PVSIGAAKTRYIAKLSTTYAKPFG------CRVIFENELESFIEKIPVTKFAGIGKSMSE 253 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 KL I T+ +L+ R + + + + G + ++ I SR+F Sbjct: 254 KLLDAQIHTLGELSK--RRGTIESWGPYAKELYLRVCGLSDDDITTKH-IRKSIGISRTF 310 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 + D +R+ + A + + + + + S Sbjct: 311 D-PLRDRNELRRRVHVLARHLSFAILKLKVIPTVFHLSLNYE--MSQKSHKNISLCEIFT 367 Query: 314 TPTQDSRDIINAATRSLDAI-WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 DS + D + + F + +L+L + Sbjct: 368 EKKFDS-----LCLKLFDEADVHKRLHLIRMSINCSSFTRESRKELSLIG-FEEDQKMYR 421 Query: 373 LMTVMDTLNAKEGRGTLYFAGQG 395 L + K G L + + Sbjct: 422 LTNHSQEIREKYGIDMLKWGSEL 444 >UniRef50_Q54KS3 UMUC-like DNA-repair protein n=1 Tax=Dictyostelium discoideum RepID=Q54KS3_DICDI Length = 517 Score = 197 bits (500), Expect = 8e-49, Method: Composition-based stats. Identities = 58/310 (18%), Positives = 123/310 (39%), Gaps = 18/310 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F D++AFYA+ E + +L G PV V S ++ N A+A GV+ G P L Sbjct: 83 FIHIDMDAFYANVEEMDNKELIGHPVAVGS--IDMLVTSNYAARAYGVRSGLPGLLAMKL 140 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD---LTD 118 ++ S + Y ++S + + L + S+DE D+T + D Sbjct: 141 CPH--LIILPSRMDRYREVSLIIRNILYKFDKNYVSPSLDEGCIDITEYLKDNENLTGID 198 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +++ + ++T LT +GI+ + L+K+++ K + + ++ + Sbjct: 199 VANQLQNDIFEKTTLTCSMGISCSPLLSKISSEINKPNGYFY------LDKQYSQEFIKT 252 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + + + GIG+ + L +G++ V D+ + + E + P + Sbjct: 253 IQIKKLPGIGKVRQELLKTLGLEFVSDIIEH-RYELYYLLPEQRELLFKHALAIPIFPNK 311 Query: 239 EFAPTKQ---EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + I ++ + + D + + S +A E L E++Y + ++ Sbjct: 312 SSFRINKKKTMISKEKNC-KELYDEKDLEDLMKSLFDKAIEMLNIENKYATTLIVKVQDF 370 Query: 296 PFALNEPYYG 305 F + Y Sbjct: 371 SFKVINYSYQ 380 >UniRef50_Q7QBI8 AGAP003157-PA (Fragment) n=3 Tax=Culicidae RepID=Q7QBI8_ANOGA Length = 696 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 72/406 (17%), Positives = 124/406 (30%), Gaps = 66/406 (16%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ +YA E V P L KP V CV+ N A+ G+K P + Sbjct: 17 VIIHIDMDYYYAQVEEVLNPSLKDKPFAV--KQRFCVVTSNYIAREKGIKKLQPVKEALA 74 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL---- 116 ++ + Y MS R+ + +P VE +DE + DL V+ Sbjct: 75 ACPELVLLNGE-DITKYKAMSVRINEIMHRFTPHVEKLGLDENYLDLDFVQGFIHPPRTD 133 Query: 117 ---------------------------------TDFGREIRATVLQRTHLTVGVGIAQTK 143 T +EIR + Q L GIA K Sbjct: 134 ESSALDPPSHRETDRDLFRRCCCCGCDRRLILATHLAQEIRDCIFQELGLRCCAGIAHNK 193 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLD-AMGIK 201 LAKL K+ ++ + +++L V + GIG + ++ L + GI Sbjct: 194 LLAKLVGAVHKQNKQ------TVLLPTHATAFVASLGSVRSLTGIGEKTAQTLADSCGIS 247 Query: 202 TVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 TV DL ++ + KH R + G + + + + S I+ Sbjct: 248 TVTDLQCIELDRLTKHLGYEQAVRLKQLALGRDDTVVRQTGKP-KSVGLEDSCPS-ISVR 305 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT------ 314 R + + + + I ++ A + S KLL Sbjct: 306 ADAEDKFRHLLVRLVKNIADDGRVPIAIKVTVRKYDLA-KRTTHRESKQDKLLPSMFRHV 364 Query: 315 ------PTQDSRDIINAATRSLDAIWQAGHR--YQKAGVMLGDFFS 352 I+ + + + G+ F Sbjct: 365 GGRLVLADGAQEKILTIVMKVFERMVDLRQPFNITLLGLSFFKFQE 410 >UniRef50_Q8EWQ4 DNA-damage repair protein MucB n=1 Tax=Mycoplasma penetrans RepID=Q8EWQ4_MYCPE Length = 386 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 71/403 (17%), Positives = 154/403 (38%), Gaps = 27/403 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D+++F+AS E RP+ P+ V + + N A+ LGVK K + Sbjct: 5 IFHIDMDSFFASVELAERPEYEKLPLAVGHL---VIASANYVARGLGVKSAMNIVDAKKI 61 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFG 120 + ++ N Y MS+++ S L LS +E SIDE + D++ + +F Sbjct: 62 CPQLTIIY--PNKNKYTSMSDKIYSFLSSLSKNIETGSIDEWYLDVSNTQYENWKEIEFA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++ ++ Q+ +L VG + T LAK+A + AK T + + + L Sbjct: 120 SLVKNSIKQKFNLNCTVGNSFTPFLAKMATNLAKPDGFLT------LTKDNFKSYIYDLH 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADT-DIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + + GIG ++++L + + + D+A+ + IRK + + + G C + Sbjct: 174 ISKIIGIGPSLTRQLIELNLHYIKDIANVKNDYLIRKKIGLHWSKLRMNVLGIICDPINP 233 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + S+S ++Y + I L+ + + ++ I+ S Sbjct: 234 DY-KRKNLGRSQSI-RNYSEYQEFLKLIKELTDDINSGLKYQDFMFKSVNIKIRYSDG-- 289 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH--RYQKAGVMLGDF-FSQGVA 356 + S + ++ + I + + + + Sbjct: 290 ----DSATKSFNFVNFQNQIP--LHVVVDLFEQISDFSKYDQVINLSITANNIMENDNNE 343 Query: 357 QLNLFDDNAPRPGSE-QLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 QL +FD + +E +L + +N + +++ + Sbjct: 344 QLTIFDSPTQKISTESKLEKIRKQVNKTLNKKIIHYPSSRSNR 386 >UniRef50_P75241 Uncharacterized protein MG360 homolog n=3 Tax=Mycoplasma RepID=Y537_MYCPN Length = 412 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 76/395 (19%), Positives = 153/395 (38%), Gaps = 28/395 (7%) Query: 13 SCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 S E + P+L +P++V + + V N A++ G+K G P K +L + + + Sbjct: 31 SVEEIENPELKNQPLIVGNRTSRSVVSTCNYLARSYGIKSGMPIAKALELCPQA--IFAT 88 Query: 72 SNYELYADMSNRVMSTLEELSPR-VEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 S++ Y S ++ + + E V SIDE F + + R + I+ V ++ Sbjct: 89 SHFRNYRKYSAKIFAMIAEQFNLEVHTLSIDEGFVCFRDL-SPRKAFSLAKRIQRHVYEQ 147 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 + + +GI+ TLAK+ ++ AK + ++ + ++ + LP+ ++ GIG+R Sbjct: 148 LNFHISIGISNQFTLAKIFSNQAKPFGVKSCFS------KEVKRKLWPLPIVELPGIGKR 201 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKH-FNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 + DLA + K F + E GE Q E + I Sbjct: 202 QLDNAFKNNFHKIGDLAKCKDVTLFKRVFGIAWESLHAVALGETYTQ-SEQDVKSRSIAV 260 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSAS 309 S + ++Q + S +L+ Q C+ + +K++ F +N S S Sbjct: 261 SETLEYLNYSSNQLQQKLTSIFNELYARLQLSFQMCKGVVVQLKSNDFIVN------SHS 314 Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQGVAQLN---LFDDNA 365 + T D + ++ + + + G + GV + + LF + Sbjct: 315 QSIKKYTADYQTLLVIVKKLFNRLLMGVGLNIRLIGVSFFGLKNNPSSSRPEGLLFYEYQ 374 Query: 366 PRPGSEQ-----LMTVMDTLNAKEGRGTLYFAGQG 395 +Q L ++ +N G + A + Sbjct: 375 QAKPKQQTAHFALDQMIYEINQSFGYEIIQRAKKL 409 >UniRef50_Q4PCE3 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PCE3_USTMA Length = 1488 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 66/423 (15%), Positives = 130/423 (30%), Gaps = 73/423 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG----------------------CVI 38 + D ++F+ + RPDL KPVVV + Sbjct: 524 VIMHIDFDSFFVAVGLKKRPDLKDKPVVVCHGTGFGLPAAKAGDENRPADNQSSSTSEIA 583 Query: 39 ARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIY 98 + + +A+ G++ G + K L + ++E Y +S + L E S ++ Sbjct: 584 SCSYKAREFGIRNGMSLGQAKRLCSHVETI--PYDFEAYNSVSLTFYTFLLEHSDALQAV 641 Query: 99 SIDEAFCDLT--------GVRNCRDLT------------------DFGREIRATVLQRTH 132 S+DEA D++ G N L R + R Sbjct: 642 SVDEALVDVSLLLQSMRDGDTNDGSLYQRYRDHLGSQGQVWTAEKQLAEAFRDEIRDRCE 701 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 +GI LA+LA AK + ++ ++AL VDD+ GIG + Sbjct: 702 CEASIGIGSNILLARLATRKAKPGGSFH------LTDDAKQLFLNALDVDDLHGIGWSLR 755 Query: 193 KKLDAM-GIKTVLDLADTD--IRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 ++ + + ++ R + + + + G +L E +Q + Sbjct: 756 DRIRELFQTINIGEILSKTNKRRMMAEFGPKKGKMIWDRMHGIDADRL-EGNKLRQSVGS 814 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS---------PFALN 300 ++G R + +++ ++ R +S + F + Sbjct: 815 HVNYGIRFLTEQEAENFVTGMCQEVSQRAKAVKLRGRQVSVQVMVRAKTAPVEAPKFLGH 874 Query: 301 EPYYGNSASVKLLTP----TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + S + P D I AA + + + + L Sbjct: 875 GVCDTHHRSAPVSGPGGVAIDDEARIRAAAWPLIRDLKADPKELRGIAISLNKLEPADAN 934 Query: 357 QLN 359 L+ Sbjct: 935 VLS 937 >UniRef50_UPI00017E10E6 DNA-directed DNA polymerase eta n=2 Tax=Apocrita RepID=UPI00017E10E6 Length = 753 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 69/388 (17%), Positives = 130/388 (33%), Gaps = 81/388 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + L D++ F+ ET +P+ GKP+ V+ N G +IA N EA+ GV + Sbjct: 8 IVVLIDMDCFFCQVETRLKPEHAGKPLAVVQYNQWKLGGIIAVNYEARDFGVTRHMRGEE 67 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR- 111 K+ + ++ Y V+ L++ VE S+DEA+ D+T + Sbjct: 68 AKEKCPDIVLAIVPSQRGKADTSRYRSAGREVIDVLKKYCNIVERASVDEAYLDITQIVD 127 Query: 112 -----------------------------------NCRDLTDFGREI------------- 123 + L D+ E+ Sbjct: 128 DKLSKEIIDSDSISKQLENSYIVGFSESDINNEEQRSKGLQDWLSELADDIQIQRLAIAG 187 Query: 124 ------RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 R V T GI+ K LAKLA K ++ + +L Sbjct: 188 AFVEHIRKEVYDTTGFRCSAGISFNKILAKLACGLHKPNRQ------TILPASAVPELYG 241 Query: 178 ALPVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCL 235 +LPV V +G ++ +D++ + DL +++++ F+ RG Sbjct: 242 SLPVKKVRNLGGKLGDMVIDSLKCNVMADLLPYSLQYLQNRFDEKTGMWLYNIARGIDSE 301 Query: 236 QLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSE----HQYCRFIS 289 + + I + F + I + ++ I +A E+L + + + Sbjct: 302 PVTPR-LVSKSIGACKRFPGKQAIVELDVLKHWIGELSAEVCERLEQDLEENERKASQLI 360 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + ++ S +V L + Q Sbjct: 361 VSFQYC---QDKKLVSQSRTVALTSYKQ 385 >UniRef50_P34409 DNA polymerase kappa n=6 Tax=Chromadorea RepID=POLK_CAEEL Length = 503 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 81/407 (19%), Positives = 131/407 (32%), Gaps = 76/407 (18%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D++A++A+ E P L P+ V S+ + N A+ GV+ G P F L Sbjct: 86 VCIDMDAYFAAVEMRDNPALRTVPMAVGSS--AMLSTSNYLARRFGVRAGMPGFISNKLC 143 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRV--------------------------- 95 + NY Y +S + E V Sbjct: 144 PS--LTIVPGNYPKYTKVSRQFSQIFMEYDSDVGMMSLDEAFIDLTDYVASNTEKKTFKR 201 Query: 96 ---------------------EIYSIDEAFCD---------LTGVRNCRDLTDFGREIRA 125 E I+E+ C V + REIR Sbjct: 202 HRFGGDCPCWLPRFDENENTLEDLKIEESICPKCEKSRKIYYDHVEFGTGREEAVREIRF 261 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 V Q T LT GIA LAK+ + K + ++ + + LP+ V Sbjct: 262 RVEQLTGLTCSAGIASNFMLAKICSDLNKPNGQYVLE----NDKNAIMEFLKDLPIRKVG 317 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ 245 GIGR +L AM I+TV D+ + + E +R G P E P ++ Sbjct: 318 GIGRVCEAQLKAMDIQTVGDMNLKKNLYPLCFTPLSQESFLRTALGLPGRP-SESDPRRK 376 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH-QYCRFISTFIKTSPFALNEPYY 304 I R+F +D+ + + E +R + ++ +K S F + Sbjct: 377 SISVERTFS-PTSDFNILLEEHQEICRMLEEDVRKSGIVGGKTVTLKLKLSSFDV----- 430 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + S+ + DI + L+ + G + GV L Sbjct: 431 -LTRSLTPSDVVKSLEDIQKFSLELLEK--EKGKEIRLLGVRLSQLI 474 >UniRef50_B3RPL1 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3RPL1_TRIAD Length = 386 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 70/392 (17%), Positives = 123/392 (31%), Gaps = 52/392 (13%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++ FYA E L KPV + ++ N A+ GV P K + Sbjct: 5 IIHLDIDCFYAQVEMAKNSSLRNKPVGI--RQKHIIVTSNYPARERGVGKLIPLTKALEK 62 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD------ 115 V+ + Y ++S +V L++ S +V DE + D+T + CR Sbjct: 63 CPDLIVINGE-DLTEYREVSFKVTDYLKKFSTKVHRLGFDENYIDVTELVQCRLNQFQGR 121 Query: 116 ----------------------------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + E+R + LT GIA K L+K Sbjct: 122 LFVGYLYQNSNTVKAQACDCNCRLRMIIGSQIAAEMRQGLWNVFSLTSSGGIAHNKMLSK 181 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 + + K + E L+ +L + + GIG + KL ++GI TV +L+ Sbjct: 182 IVSGLHKPNLQTA------IYPEDTLDLLHSLELRKIAGIGSATNNKLQSVGITTVKELS 235 Query: 208 DTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + ++ HF + +G + + I SF T S ++ Sbjct: 236 TLPLAVLKTHFPTPQACTLFQWCKGIDDSDVVAATKP-KSIGVEDSFSRCCTMIAS-KKR 293 Query: 267 ICSYAARAAEKLR---SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS-RDI 322 I +L Q + S + ++ T I Sbjct: 294 ISDLIRHLLSRLVDGCEHPQTVKLTIIKHDRSSYKRESKQCSVPSTFYSTKDTDKKCSII 353 Query: 323 INAATRSLDAIWQAGHR--YQKAGVMLGDFFS 352 ++ L + + GV +F Sbjct: 354 LDLMMNLLRKLVDIHKPFRLRLFGVTFTNFKD 385 >UniRef50_Q6CIW8 KLLA0F23375p n=1 Tax=Kluyveromyces lactis RepID=Q6CIW8_KLULA Length = 829 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 65/387 (16%), Positives = 118/387 (30%), Gaps = 36/387 (9%) Query: 1 MFALCDVNAFYASCETVFRP--DLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFK 57 ++ D + F+A D+ P+ + N+ + + N A++ GV G Sbjct: 215 VYFHIDFDCFFAQVSAKIDGKYDIHATPIAISHGINNSDISSCNYVARSFGVYNGMWVSS 274 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEE--LSPRVEIYSIDEA--FCDLTGVRNC 113 L + ++ Y +SN S L++ + V SIDEA +T Sbjct: 275 ALKLCPD--LKILDYEFDEYEAISNLFYSALKDIGIFKMVLPISIDEAIGCMLITPDITS 332 Query: 114 RDLTDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 LT ++R V T +V VG + LA+LA K ++ Sbjct: 333 ELLTQKCMQVRNAVYNVTQGYSVSVGCGPSVLLARLALRKGKPNGFHISWFDTVT---EC 389 Query: 173 RKLMSALPVDDVWGIGRRISKKLDA-----MGIKTVLDLADTD---IRFIRKHFNVVLER 224 + + D+ GIG K+ I + DL + + I+ + ++ Sbjct: 390 HAFIDHFKLKDLPGIGYSTDLKIKEQFGNVQNISDLRDLLERPSNVSKLIKVIGSKNTKK 449 Query: 225 TVRELRGEPCLQ------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 L G+ + K+ + ++ R + + A EKL Sbjct: 450 LQIYLDGKDDDESISMVKDPHTYFQKKSLSVEINYAIRFKTIDDVDIFLERLALHLWEKL 509 Query: 279 RSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 R + R I+ + F S L T TQ I + Sbjct: 510 RDSNLMTRQITLKLMKRAQGAPVDPPKFMGMGKCDALSKVSNLGTNTQKFGTIASECKTL 569 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + + G+ Sbjct: 570 FRILSVPPEEVRGIGIQFHRLTDSNQK 596 >UniRef50_C5KD43 DNA polymerase IV, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5KD43_9ALVE Length = 585 Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats. Identities = 75/411 (18%), Positives = 142/411 (34%), Gaps = 49/411 (11%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 D++ FYA+ E P L P+ V D + N A+ GV+ P F ++L RR Sbjct: 18 IDMDMFYAAVEIRDDPSLHDVPLAVGG--DAMISTANYVARKYGVRAAMPGFIARELCRR 75 Query: 65 C------------------GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCD 106 G+ + Y S T+ P +++ S+DEA+ D Sbjct: 76 QGVELRLEGPSGVVVMMEGGLRFKPVDMPRYQAASKIFKDTVSLYGP-MKMLSLDEAYID 134 Query: 107 LTGVRNC-----------RDLTDFGREIRATVLQR-THLTVGVGIAQTKT-LAKLANHAA 153 +T + +R V ++ + LT GIA+ LAK+A+ Sbjct: 135 ITAKVAEAAMVDESISEVEAASLLVSRMREEVCEKSSGLTCSAGIARGCFRLAKMASDVN 194 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIR 212 K + + + + ++P+ + G+GR ++L A +GI V D+ Sbjct: 195 KPNGQFMVPTTT----QGMLEWLHSMPIRKLHGVGRVSERELSAGLGIHKVGDIIIKAAE 250 Query: 213 FIRKHFNVVLERTVRELRGEPCLQLEEFAPT--KQEIICSRSFGERIT-DYPSMRQAICS 269 + + + G ++ A + I RS + + + + Sbjct: 251 LLHAMSSSGGHWLIDAAMGVTDMEDVTAAAESGPKSISQERSLSTAKSGSAAYLHEVLEE 310 Query: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 ++ E + QY R ++ +KT F + S L + R + AA+ Sbjct: 311 LCSQVMELCAEKEQYGRCVTVKLKT--FEWDVKQ----KSNTLKREVRSGRLLYEAASEL 364 Query: 330 L-DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 + A+ + GV + F + + D + +D Sbjct: 365 MSTALATLKKPIRLLGVRVSSFQTAVPQGQSTLGDFLAAHKASSSRVAVDE 415 >UniRef50_Q9VHV1 DNApol-iota, isoform A n=12 Tax=Drosophila RepID=Q9VHV1_DROME Length = 737 Score = 193 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 70/410 (17%), Positives = 123/410 (30%), Gaps = 71/410 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++ FYA E + P L K + + V+ N A+A GV + + + Sbjct: 17 IIHLDMDYFYAQVEEIRDPTLRSKALGI--QQKNIVVTCNYVARAKGVTKLMLIAEAQRI 74 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL----- 116 +V + Y MS R+ L +P VE DE F D+T + R Sbjct: 75 CPDLVLVNGE-DLAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTALVELRQAHVAEA 133 Query: 117 -------------------------------TDFGREIRATVLQRTHLTVGVGIAQTKTL 145 T +EIR + R +T GIA K L Sbjct: 134 LLRPPVGHTYPADGTPLSNCDCGCAQRLAIGTRIAQEIREELKLRLGITCCAGIAYNKLL 193 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLDAMGIKTVL 204 AKL + + Q+ + + M L + V GIG++ L G+ +V Sbjct: 194 AKLVGSSHEPNQQ------TVLVSTYAEQFMRELGDLKRVTGIGQKTQCLLLEAGMSSVE 247 Query: 205 DLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 L D+ +RK F R G + + I + + I+ + Sbjct: 248 QLQQCDMDVMRKKFGFETATRLRDLAFGRDTSLVRPSGKP-KTIGMEDAC-KPISVRTDV 305 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT--------- 314 + R E++ + + I ++ + + + + +L Sbjct: 306 EERFRMLLKRLVEQVAEDGRVPIAIKVVLRKFD-SQKKSSHRETKQANILPSLFKTSMCP 364 Query: 315 ----------PTQDSRDIINAATRSLDAIWQAGHR--YQKAGVMLGDFFS 352 ++ R + I G+ F Sbjct: 365 GETGVSKVQLADGAQDKLLKIVMRLFERIVDMSKPFNITLLGLAFSKFQE 414 >UniRef50_O48586 DNA-damage-inducible protein P n=6 Tax=Embryophyta RepID=O48586_ARATH Length = 689 Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 77/467 (16%), Positives = 142/467 (30%), Gaps = 107/467 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E +P+L G P V+ G +IA + EA+ GVK + Sbjct: 13 VIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKCGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRV------------MSTLEELSPRVEIYSI 100 K + +V ++ LY + V +S L + + E SI Sbjct: 73 AKAACPQIQLVQVPVARGKADLNLYRSAGSEVDGSGSYYYTVCVVSILAKSG-KCERASI 131 Query: 101 DEAFCDLTGVRNCRDLTD------------------------------------------ 118 DE + DLT Sbjct: 132 DEVYLDLTDAAESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDAD 191 Query: 119 -----------FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 E+R VL+ T T GIA K LAKLA+ K Q+ + Sbjct: 192 RRDKLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQ------TVV 245 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNV-VLERT 225 ++L+S+LP+ + +G ++ L +G+ TV DL +++H+ V Sbjct: 246 PYAAVQELLSSLPIKKMKQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQEHYGVNTGTWL 305 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEK----LR 279 RG +++ + ++F + +++ + + +E+ L Sbjct: 306 WNIARGISGEEVQGRLLP-KSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSDLE 364 Query: 280 SEHQYCRFISTFIKTSPF------ALNEPYYGNSASVKLLTPT----QDSRDIINAATRS 329 + ++ + S S + +D+ ++ AA R Sbjct: 365 QNKRIASTLTLHASAFRVPTSLSKDSDSHKKFPSKSCPMRYGVTKIQEDAFNLFQAALRE 424 Query: 330 L--------DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 R V ++ +P Sbjct: 425 YMGSFGIKPQGNKLETWRITGLSVSASKIVDIPSGTSSIMRYFQSQP 471 >UniRef50_C9KLN2 UV-damage repair protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLN2_9FIRM Length = 499 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 81/487 (16%), Positives = 145/487 (29%), Gaps = 84/487 (17%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 F D+ +FYAS E V R D +VV + +A K+ GV F+ Sbjct: 6 FIAIDLKSFYASVECVERGLDPLTTNLVVADESRTEKTICLAATPAIKSYGVPGRARLFE 65 Query: 58 QKDLFRRCG-------------------------------VVCFSSNYELYADMSNRVMS 86 + + Y D S R+ Sbjct: 66 VIQKVKAANSMRRFYAPGRKLTGTSHDATELANNPNLAIDYIVAPPRMAFYMDYSARIYK 125 Query: 87 TLEELSP--RVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQT 142 + YSIDE F + + D G ++ VL+ T +T GI Sbjct: 126 VYLRYIAPQDIHTYSIDEVFINAAPYLGTYEMTAHDLGMKLMREVLKETDITATAGIGTN 185 Query: 143 KTLAKLANHAAKKWQR---QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 LAK+A K + L + +RKL + P+ D W +G+ ++KL MG Sbjct: 186 LYLAKIAMDIVAKHMPPDPDGVRIAALDEISYRRKLWAHTPLTDFWRVGKGYAEKLANMG 245 Query: 200 IKTVLDLADTDIR-----FIRKHFNVVLERTVRELRGEPCLQLE---EFAPTKQEIICSR 251 + ++ D+A + + + F V E + G +E + P + + Sbjct: 246 LYSMGDIARRSLDAQGEKELYRVFGVNAELLIDHAWGYEPCTMEAIKAYRPASTSVSSGQ 305 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS--------------PF 297 T+ R + A + L ++ I I Sbjct: 306 VLHCPYTN-EQARLIVWEMADQMILDLVAKKLMTSQIVLDIGYDIENIAKGYTGPVHIDH 364 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV-- 355 +V L + ++ +++ D I ++ + +G + Sbjct: 365 YGRRVPKPAHGTVSLKKHSSSTKQLLHETLALYDRIVSPTLMVRRITITMGKLIDEDSAT 424 Query: 356 ------AQLNLFDDNAP-----------RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 Q +LF D + L M + K G+ + A ++ Sbjct: 425 KKNEDIVQFDLFSDTEKEAKESEAAEHAEQKEKSLQHAMIAIKNKFGKNAILKATNLKEE 484 Query: 399 QWQMKRA 405 + R Sbjct: 485 ARTIARN 491 >UniRef50_D1R481 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R481_9CHLA Length = 271 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 106/278 (38%), Gaps = 14/278 (5%) Query: 85 MSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQT 142 M L S VE+ SIDEA+ D++ +++ + +GR+++ VL+ T LT VGIA Sbjct: 1 MDILSRHSSLVEVVSIDEAYMDVSFLKDDPEMTAKQYGRKLKEAVLKNTGLTCSVGIASN 60 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 K +AK+A+ AK + ++ LP+ + GIG + K L + T Sbjct: 61 KLIAKIASSRAKPNGLYE------IPSGEEAAFLATLPIGAIPGIGSKTEKSLIDDRLYT 114 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 + DL D+ + + + G ++ + I +F + D Sbjct: 115 IADLQKIDLDTLIERYGTRGYYFYLAAHGIDKRPVDGEEYFPKSIGAETTFEADLADSTI 174 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + + + +A ++L+ R S ++ S F + S L + TQD + I Sbjct: 175 LLETLSELVQKACKRLKKYQTRTRGFSLKLRYSDFR------TVTRSRLLFSHTQDEQTI 228 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 A + + G+ L Sbjct: 229 WEEARDFFLKVHTKDVPLRLIGISLEKLSDGYWQPTLW 266 >UniRef50_Q3A3S4 Nucleotidyltransferase/DNA polymerase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A3S4_PELCD Length = 393 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 69/400 (17%), Positives = 130/400 (32%), Gaps = 20/400 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 V F + P L +P+ V + + +AEA++ GV+ G + + Sbjct: 5 ILHVAVPDFDVALARAADPGLESRPLAVATGVSERALLRCVSAEARSDGVQPGMSVYVAR 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-D 118 + EL + SP E S F DLTG R T D Sbjct: 65 KCCPALHL--LPPQAELAQRATRVFGELAACCSPLWEPGSPGRFFIDLTGSRRLLGATLD 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + +++R L+ G+A K +A++A G+ D+ + + Sbjct: 123 VAARLERDIVERLRLSATCGMAGNKLVARIAADY-----LHRPGICDVLR-GSESCFIGP 176 Query: 179 LPVDDVWGIGR-RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V + G+G R + L + ++ + +A + + + RG + Sbjct: 177 LTVSTLPGVGSVRTGRLLADLNLRRIEQVAALSVAQLEPVCGPFAALLQQRARGIDPSPV 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 II D ++R A+ A +LR + + ++ Sbjct: 237 CPPRR-SSAIIEETVLPRADNDDMAVRAALGRLAESCGLRLRELGRGTTCLRLQVRYVDG 295 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 E +A ++++AA L WQ R + + Q Sbjct: 296 LSEERTDSFTAPRAFDL------ELMHAADHLLQRTWQRRVRLRALRLGCDRLAPL-TRQ 348 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 L+LF + L T +D L + G ++ + + Sbjct: 349 LDLFAATQQSNDEQALQTALDRLRRQFGHESIQWGRNRGK 388 >UniRef50_B8C7E7 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8C7E7_THAPS Length = 444 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 112/302 (37%), Gaps = 15/302 (4%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 D++ F+ SC + P L P V + + N A+ GV+ P + L + Sbjct: 141 IDMDGFFISCHILSLPHLAHIPACVGGTS--MISTSNYAARKYGVRAAMPGYLGSTLVKE 198 Query: 65 C-----GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLT 117 + S+++LY S V + LEE P + +YS+DEA+ D+ Sbjct: 199 LSGGKETLTFVKSDFDLYKRKSGEVRAVLEEYDPNLSMYSLDEAYMDIGPYLKILLSTAQ 258 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 IR V T LT G+A LAK+A+ K + G + + Sbjct: 259 QLLNSIRQRVKNATGLTCSAGLASNFLLAKVASDVNKPNGQCFVGS----SEAEILAFAN 314 Query: 178 ALPVDDVWGIGRRISKKLDAMG-IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 L + + GIGR K L + ++TV DL D +R G Sbjct: 315 PLSIRKISGIGRVTEKMLRGVCEVETVKDLYDHRAEVYFLFKPASANLMMRASIGYAETG 374 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 A T++ I R+F + + + + + L+ + + I+ +K + Sbjct: 375 KHHEATTRKGISHERTFS-PTSSWSDLCNKLETIVQALVHDLKQRNLKPKTITLKVKLAN 433 Query: 297 FA 298 F Sbjct: 434 FD 435 >UniRef50_P12689 DNA repair protein REV1 n=7 Tax=Saccharomyces cerevisiae RepID=REV1_YEAST Length = 985 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 67/424 (15%), Positives = 136/424 (32%), Gaps = 45/424 (10%) Query: 1 MFALCDVNAFYASCETVFRP------DLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGD 53 + D + F+A+ + R D P+VV + + N A++ G+K G Sbjct: 357 IIFHIDFDCFFATVAYLCRSSSFSACDFKRDPIVVCHGTKNSDIASCNYVARSYGIKNGM 416 Query: 54 PWFKQKDLFR-RCGVVCFSSNYELYADMSNRVMSTLEE--LSPRVEIYSIDEAFCDLTGV 110 + + + ++ +E + S STL+ + + SIDEA C Sbjct: 417 WVSQAEKMLPNGIKLISLPYTFEQFQLKSEAFYSTLKRLNIFNLILPISIDEAVCVRIIP 476 Query: 111 RNCRDLTDFGREIRATVLQRT-----HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 N + + + Q TV +G + + LA+LA AK + Sbjct: 477 DNIHNTNTLNARLCEEIRQEIFQGTNGCTVSIGCSDSLVLARLALKMAKPNGYNITFKSN 536 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDA--MGIKTVLDLA-DTDIRFIRKHF-NVV 221 LS + S+ +DD+ G+G +L++ ++ DL + ++ + + Sbjct: 537 LS-----EEFWSSFKLDDLPGVGHSTLSRLESTFDSPHSLNDLRKRYTLDALKASVGSKL 591 Query: 222 LERTVRELRGEPCLQ------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + L+G+ + + ++ + ++G R + + I Sbjct: 592 GMKIHLALQGQDDEESLKILYDPKEVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLL 651 Query: 276 EKLRSEHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 EKL ++ I+ + + S S +L PT + I Sbjct: 652 EKLNEINKTTSQITLKLMRRCKDAPIEPPKYMGMGRCDSFSRSSRLGIPTNEFGIIATEM 711 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL-----FDDNAPRPGSEQL-MTVMDTL 380 + + + G L F E L V + + Sbjct: 712 KSLYRTLGCPPMELRGLALQFNKLVDVGPDNNQLKLRLPFKTIVTNRAFEALPEDVKNDI 771 Query: 381 NAKE 384 N + Sbjct: 772 NNEF 775 >UniRef50_C0WCL1 DNA-repair protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCL1_9FIRM Length = 495 Score = 191 bits (484), Expect = 5e-47, Method: Composition-based stats. Identities = 78/465 (16%), Positives = 139/465 (29%), Gaps = 63/465 (13%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E V R D +VV ++ +A + K GV F+ Sbjct: 23 YICIDLKSFYASVECVDRGLDPLDTCLVVADKSRSDRTICLAVSPPLKKRGVPSRPRLFE 82 Query: 58 QKDLFRRCG-------------------------------VVCFSSNYELYADMSNRVMS 86 + + Y +MS + Sbjct: 83 VIRKVDEINALRRSKAPQRSFRGMSHFDSQLRHHPEKALSYIVAMPRMQRYIEMSRDIYG 142 Query: 87 TLEELSP--RVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQT 142 + + +YSIDE D T + + V Q+T +T GI Sbjct: 143 IYLQYIAPQDIHVYSIDEVMIDATPYLSTYGMTPYTLAMTMIRDVYQKTGITATGGIGTN 202 Query: 143 KTLAKLANHAAKKW---QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 L+K+A K + L +R L P+ D W IG +++L A G Sbjct: 203 LYLSKVAMDIVAKALMPDPYGVRIAFLDETAYRRTLWGHQPLTDFWRIGPGSARRLSAHG 262 Query: 200 IKTVLDLADTDI---RFIRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQEIICSRSF 253 + T+ D+A + + F + E + G ++ + P + S+ Sbjct: 263 LYTMGDIARLSLSDASLLYDWFGINAELLIDHAWGWESCRMSDIKRYIPKASSLGTSQVL 322 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE------PYYGNS 307 + + R L + ++ I P + Sbjct: 323 PKP-YSPENARLIAWEMTDELILDLARKRLVTDEVAITIGYERTQPQGFSRDLPPSGRSH 381 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG----VAQLNLFDD 363 S +L T + I+ + D + ++ V SQ V Q LF + Sbjct: 382 GSARLAGWTHAGQPIMASMMALYDRLAHPYLWVRRMSVTAVHVRSQDIQDPVRQGFLFAE 441 Query: 364 NAP----RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 P P +L ++ + GR L ++ + R Sbjct: 442 QTPLLDGDPREARLQEAALEVHHRFGRNALVKGRNLCKEAMTITR 486 >UniRef50_A8ND78 ImpB/MucB/SamB family protein n=1 Tax=Brugia malayi RepID=A8ND78_BRUMA Length = 715 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 122/378 (32%), Gaps = 62/378 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG------CVIARNAEAKALGVKMGDPW 55 D++ F+ S P+L GKPV + + + + + EA+ GV+ G Sbjct: 222 ICHIDLDCFFVSVALRTHPELIGKPVAITHSRGTEGAGMSEIASCSYEARXRGVRNGCFI 281 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR---N 112 + + + ++C ++ Y +S + + L + + S DE + DL + + Sbjct: 282 KEARKVCPD--LICLPYQFDDYRHISKEIYAVLSGYTLSIRAVSCDEMYVDLESLCKEMH 339 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 ++ + IR+ +L +T VGI T +A++A AK + + Sbjct: 340 IANVMEIISVIRSEILTKTGCNASVGIGNTMLIARIATRHAKPNGQF------MIKXGDI 393 Query: 173 RKLMSALPVDDVWGIGRRISKKLD-AMG-IKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 +L+ + + GIG I KL A G + DL I ++ Sbjct: 394 DELIKKEKISSLPGIGYNICAKLKNAFGEMNLCEDLQKVPINRLQNVLGEK--------- 444 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 I T + + + + +KL I+ Sbjct: 445 ----------------IG---------TQEDEVMEFLGKMCSELEKKLHIARMTASTITL 479 Query: 291 F---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQ 341 + T + + + + T + + A + + AI + Sbjct: 480 RLLIRASDAPLVTEKYLGCGKCDAITRTAHVNGATANKAVLHAEAKKLMKAINPIISDLR 539 Query: 342 KAGVMLGDFFSQGVAQLN 359 G+ L ++ Sbjct: 540 GIGIQLTHLNEIPNISVD 557 >UniRef50_UPI0001792F1F PREDICTED: similar to polymerase (DNA directed), eta n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792F1F Length = 641 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 80/428 (18%), Positives = 138/428 (32%), Gaps = 86/428 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL---SNNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E L GKPV V+ S G +IA N EA+ GV Sbjct: 9 VIALVDMDCFYCQVEVQHNQSLTGKPVAVVQYNSWRGGGIIAVNYEARDKGVNRHMRGDD 68 Query: 58 QKDLFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 +V ++ Y S +V L + S V+ SIDEA+ DLT V N Sbjct: 69 ALQACPDLNLVRVKELHGKADLSKYRTASQKVFEVLSQFSSCVQRASIDEAYVDLTSVVN 128 Query: 113 CR-------------------------------DLTDFGREIRATVLQ------------ 129 +L + ++ LQ Sbjct: 129 HHISSNHNVITENDLPNTFVEGYSDDNSKDKNKNLKSWLHDVYNNELQDDYLLRLTIGAM 188 Query: 130 -----------RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +T GIA K L+KLA K Q+ + L Sbjct: 189 MVEKLRQSIFEQTGFRCSAGIANNKILSKLACGLHKPNQQ------TMLPPSSVPHLFET 242 Query: 179 LPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 +P+ V +G ++ +++ + + DLA + +++ FN + +G Sbjct: 243 IPIKKVKNLGGKLGERIRQEFNCEFMSDLAAIPLNDLQQKFNDKTCNFLYQISKGIDNEP 302 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL----RSEHQYCRFISTFI 292 +E + I +SF + ++Q + + +KL + + ++ + Sbjct: 303 VESRLIP-KSIGSCKSFPTGLKVKEEIKQWLNTLMNDIVDKLKDDYEANKRKATLMTVSV 361 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI------WQAGHRYQKAGVM 346 + P S T +++ A SL + Q + GV Sbjct: 362 RYLDKKTKLPT-----SQCFEVTTYSHNKLLDTAYSSLCTMTENQKSLQWKNPISFLGVA 416 Query: 347 LGDFFSQG 354 +G F Sbjct: 417 IGRFVEMN 424 >UniRef50_UPI000180D06B PREDICTED: similar to GH15415 n=1 Tax=Ciona intestinalis RepID=UPI000180D06B Length = 593 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 48/242 (19%), Positives = 103/242 (42%), Gaps = 12/242 (4%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + + + EA+A G++ G + + K+L ++ ++E Y D+S ++ + L + +E Sbjct: 361 IASCSYEARAAGLRNGMFYGRAKELCPD--LIAIPYDFEAYKDISQKLYTVLASYTQSLE 418 Query: 97 IYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DEA D+T + + IR +L T GI LA++A K Sbjct: 419 AVSCDEALLDVTQLVEDTSLTPQVIAQNIRGKILDATGCNASAGIGPNIALARMATRLGK 478 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + L++ + + LPV D+ G+GR + +L +G T +L + Sbjct: 479 PNGQHE------VTLQQAEEFIRDLPVKDLPGVGRATASRLRELGASTCGELQKIHPDLL 532 Query: 215 RKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 +K F N ++ +G ++ + ++ + ++G R+ M+ + + + Sbjct: 533 KKEFGNKTGQKLHELSKGIDEREV-CQSKERKSVSADVNYGIRLKTEDEMKTFLNNLSNE 591 Query: 274 AA 275 + Sbjct: 592 VS 593 >UniRef50_A8PR16 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PR16_MALGO Length = 1199 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 64/413 (15%), Positives = 128/413 (30%), Gaps = 70/413 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---------NNDGCVIARNAEAKALGVKMG 52 D ++F+ S +P KPV V ++ V + N A+ GVK G Sbjct: 370 IVHIDFDSFFVSVSLRAKPAWRDKPVAVCHATLTGTDGSSSTSDVASCNYVARRYGVKNG 429 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + + L ++ ++ Y +S + + L ++ +++ S+DEA D T + Sbjct: 430 MSLRQARHLCP--SILPVPYAFDAYYQVSLQFYAVLLHVADVLQVVSVDEALLDATDLLR 487 Query: 113 C------------------------------------RDLTDFGREIRATVLQRTHLTVG 136 + G +R + T Sbjct: 488 ALCEAQASERFAWPTSDAILSRLEAQFRLHLARHAGVQPAHALGEALRDVIRLETQCEAS 547 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 VGI A+LA AK +R + M L V D+WG+G + ++L Sbjct: 548 VGIGANILQARLATRQAKPCGVYVL--------DRVEEHMQMLDVRDIWGVGFSLRERLL 599 Query: 197 A-MGIKTVLDLADTDIR--FIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 A +G + D+ I++ ++ G L+ +Q + ++ Sbjct: 600 AWLGTTCIGDICQRTDEAHMIQQFGPKHGRALWQKFHGHDTHVLQ-ATRERQSVGAHVNW 658 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQ---------YCRFISTFIKTSPFALNEPYY 304 G R+ D +R+ + A + H + ++ F + Sbjct: 659 GVRLHDDTEVRRFLQDVCAEVMRRASHMHVSAATHVQLQVMQRADEAGESPKFLGHGLCR 718 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 S++ + S + AA L + + + + Sbjct: 719 TFHRSIRRRVYDRSS--LYAAAWPLLQKLQIPAVDVRGIALSVSGLERGSTRS 769 >UniRef50_B9KDE6 UV damage repair protein, ImpB/MucB/SamB family n=7 Tax=Bacteria RepID=B9KDE6_CAMLR Length = 488 Score = 188 bits (476), Expect = 5e-46, Method: Composition-based stats. Identities = 76/473 (16%), Positives = 145/473 (30%), Gaps = 75/473 (15%) Query: 1 MFALCDVNAFYASCET-VFRPDLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++A D+ +FYAS E + D ++V ++A + K + F Sbjct: 5 LYASIDLKSFYASVECILRNLDPLTTNLIVADKERTDKTIILAISPALKTYNIPSRLRLF 64 Query: 57 KQKDLFR-------------------------------RCGVVCFSSNYELYADMSNRVM 85 + K + + Y + S ++ Sbjct: 65 EFKQKIHLLNKERLKQSKKHIFKAKSFNINELNKDINLEIDYIIAKPSMATYIEFSAKIY 124 Query: 86 STLEELSP--RVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQ 141 S + + +YSIDE F DL+ + + ++ +L + GI Sbjct: 125 SIYLKYFDPKDIHVYSIDEVFIDLSSYLDKYKLSAYELLTKVLLDILHTCKIIATAGIGT 184 Query: 142 TKTLAKLANHAAKKWQ---RQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 LAK+A K Q + L + K+ + P+ D W IG+ I+ KL+ + Sbjct: 185 NLYLAKIAMDILAKRQKIDENGLLIAFLDEKLYKYKMWAHKPLKDFWRIGKGIALKLENL 244 Query: 199 GIKTVLDLADT---DIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 I T+ DLA + + KHF + E + G +++ + S+ + Sbjct: 245 NIYTMGDLARFSLNNEALLYKHFGINAELLIDHAWGIETCTMKDIKN-YKSQNHSKIMAK 303 Query: 256 RI---TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS----------------P 296 + D+ + + +L + I+ I+ Sbjct: 304 VLPFAYDHNQAIKVLKELIDHLTLELIKHNLKTNHITLDIQYDKSNLENLNSYKGFIIKD 363 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ--- 353 AS+ L T + I + I +K + L + + Sbjct: 364 DYGRNIPKNAHASINLENYTNSLKLINKKSLELFYKIIDKNLSIRKISLSLNNITTNAQE 423 Query: 354 GVAQLNLFDD-------NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +LNLF D E+L + K G+ + A + Sbjct: 424 NFQELNLFSDLNEILQEQHQLAKEEKLQKARLQIMHKFGKNAILKASSLDNET 476 >UniRef50_C2KWD3 ImpB/MucB/SamB family DNA-damage repair protein n=2 Tax=Bacteria RepID=C2KWD3_9FIRM Length = 562 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 84/490 (17%), Positives = 136/490 (27%), Gaps = 86/490 (17%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYASCE R D +VV +A + KA GV F+ Sbjct: 39 YMAIDLKSFYASCECRERGLDPMDAYLVVADGERTEKTICLAVSPALKAYGVPGRARLFE 98 Query: 58 QKDLFRRCGV-------------------------------VCFSSNYELYADMSNRVMS 86 + R+ + LY S RV Sbjct: 99 VVEKVRKINYQRSKLYGGQPLVGKSCFDSDCKAYPFLAVNYITAPPRMALYMAYSRRVYE 158 Query: 87 TLEELS--PRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQT 142 E + +YS+DE F DL EI V + + VG+ + Sbjct: 159 VYLEFVSKEDIHVYSVDEVFMDLKPYERIYQKSSRVLAEEICRRVYEEVGMIATVGLGEN 218 Query: 143 KTLAKLANHAAKKWQRQT---GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 LAK+A K + + + L+ + L P+ D W IGR I +L G Sbjct: 219 LYLAKVAMDIEAKHMQASKEGIRLAMLTEQSYRESLWQHKPLHDFWRIGRGIENRLAHYG 278 Query: 200 IKTVLDLADT---------DIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 I T+ D+A + + K F + E + G ++E+ S Sbjct: 279 IYTMGDIAMAALSGSKEKKNQALLYKLFGIQAELLIDHAFGYETCRIEDIK-AFHSKSNS 337 Query: 251 RSFGERITDY---PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS------------ 295 G+ + R A A L + + F+ ++ Sbjct: 338 LHSGQVLPSPYGFSEGRMVAEEMAEDLALDLLKKGKDSAFVQLYLSFDEENAGESYEGNL 397 Query: 296 --PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 + R A D I R +K + D Sbjct: 398 VQNHYGKRVPKSVHGLYHFPKRSNQGRAFREAVLAIYDRIMDRRLRIRKLSISAEDVRDC 457 Query: 354 GVAQ---LNLF--------------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 L+LF + E+ + K G+ L Q + Sbjct: 458 EALPEGQLDLFQHFLTSAEEEQELTERVQFLEKEEKARGAALAVMEKFGKNALLKGYQYL 517 Query: 397 QQQWQMKRAM 406 + +R Sbjct: 518 EGARGRERNR 527 >UniRef50_C6DZL5 DNA-directed DNA polymerase n=3 Tax=Geobacter RepID=C6DZL5_GEOSM Length = 417 Score = 187 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 71/422 (16%), Positives = 130/422 (30%), Gaps = 34/422 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 V AF + V +L G+PV V + + +AEA A GV G P + + Sbjct: 5 ILHITVPAFAIALARVVDSNLRGRPVAVAPLNSERALLQCISAEAAAEGVHAGTPIYHAR 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 ++ + + L A S ++ E +P VE AF DLT R D Sbjct: 65 KSCP--ALIVIAPDPHLMAKGSQALLDLSAEFTPIVEP-GAGRAFLDLTASRRLFGSARD 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + + R L G K ++++A Q GV D+ +R ++ Sbjct: 122 VAARLEKAIANRMGLEAMAGAGVNKLVSRVAADV-----MQEPGVYDVF-HGAERSFLAP 175 Query: 179 LPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 PV + G+G L + ++ V +A + +R RG + Sbjct: 176 FPVSVLPGVGESRQALLFRDLNLQRVEQVASLSVPQLRLAVGPFAPLLHDRSRGIDRSPV 235 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + EI+ + D + + A +LR + R ++ + + Sbjct: 236 QP-PRLSTEIVEEGLLDQEENDDAILLSELLRLAEACGLRLRRLRKGARKLTLSVMYADG 294 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + L PT ++ A + R + + + Sbjct: 295 VSQQGKKV------LPVPTSLDLPLLAAVEDLFFTTCKRRQRVKGLRLSCDQVAEEAGQM 348 Query: 358 LNLFDD--NAPRPGSEQLMTVMDTLNAKEGRGTLYFA-----------GQGIQQQWQMKR 404 +LF L +D L K G+ + + W ++ Sbjct: 349 -DLFAPVTAQVSQKQADLQETLDLLREKHGQDAVRWGKGLAARREATLASEPPPTWDPEQ 407 Query: 405 AM 406 Sbjct: 408 NK 409 >UniRef50_Q759A8 ADR369Cp n=1 Tax=Eremothecium gossypii RepID=Q759A8_ASHGO Length = 827 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 71/385 (18%), Positives = 121/385 (31%), Gaps = 40/385 (10%) Query: 2 FALCDVNAFYASCETVF--RPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQ 58 D + F+A+ + P P+ V V + N A+ G++ G K Sbjct: 201 VLHVDFDCFFATISGIKAGYPSKAEVPLAVCHGGSSSDVASCNYAARECGIQNGMWVSKA 260 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDLTGVRNCRDL 116 K+L + +VC Y+ Y +SN LE + V S+DEA C + + Sbjct: 261 KNLCPQ--LVCLPYTYDEYETISNAFYEVLEGLKAFDAVYPISVDEAVCVIDMPLDTLSC 318 Query: 117 TDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQT-------GGVVDLSN 168 + IR+ V +RT +V VG A + LA+LA AK GG + + Sbjct: 319 QNLCIRIRSEVAERTGGCSVSVGCAPSLVLARLALKRAKPDGYLVCTKESIKGGDTQVVS 378 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKL------DAMGIKTVLDLADTDIRFIRKHFNVVL 222 L + D+ G+GR I++KL I V L I + ++ Sbjct: 379 P---AHLFETCALRDLPGVGRAIAEKLLLGSTGHEHTIAQVSQLFSRS-ELIARLGSITG 434 Query: 223 ERTVRELRGEPCLQ------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 + +G ++ ++ + ++G R P + + Sbjct: 435 AKLADLFQGLDDVESSRMLCNPRAYFARKSLSVEINWGIRFDAVPEVDAFLDRLVQYLVG 494 Query: 277 KLRSEHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAAT 327 KL I I + S S +L T I Sbjct: 495 KLNELRMTTSHIVLKIARRSRDAPIEPPKYLGMGDCDSYSKSCRLGLATNIPGVISAEIK 554 Query: 328 RSLDAIWQAGHRYQKAGVMLGDFFS 352 + + + V Sbjct: 555 AAFRMLCCPAKELRGIAVQFLKLKE 579 >UniRef50_B7FT83 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FT83_PHATR Length = 460 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 76/377 (20%), Positives = 144/377 (38%), Gaps = 44/377 (11%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 D++ FY +CE + RP+L +P V N ++ N A+ GV+ + L Sbjct: 82 VDMDMFYMACELLERPELASEPACVGEN---MILTSNYLARKYGVRSAMAGWIGDRLVEE 138 Query: 65 C-----GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 ++ S ++LY S++V + L + P + YS+DEA+ DL + ++ Sbjct: 139 LSSGTKKLIHVPSRFDLYRTKSHQVRNVLSQYDPHLRCYSLDEAYMDLAPYLALKLTRNW 198 Query: 120 --------------GREIRATVLQRTH-LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV 164 +++R+ V + T LT G+A L+K+A+ K + + Sbjct: 199 DHERISAVLAGSQVLQDMRSRVTEVTGGLTCSAGLAPNFLLSKIASDRNKPNGQ----CL 254 Query: 165 DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER 224 S+ E + LP V GIGR +K L + GI TV DL + +R F Sbjct: 255 VPSDHESIIGFLHPLPTRKVSGIGRVTAKILSSFGIATVADLYR-ERSLVRFLFQEASAE 313 Query: 225 TVREL----RGEPCLQLEEFA----PTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 + G ++ P ++ I R+F + + ++ + A + Sbjct: 314 FLLRASIGCSGSDERNADDVETDDGPGQKGISRERTFAAK-ESWTAINLKLEEIAELLSS 372 Query: 277 KLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA 336 ++ ++ + ++ +K F S S+ Q + D+ A L + Sbjct: 373 DMKHKNIFAHTVTVKVKLRSFD----CLSRSRSLGRGVFIQAAADLRPIALDLLRELKDE 428 Query: 337 ---GHRYQKAGVMLGDF 350 + G+ F Sbjct: 429 FSGSFAVRLLGIRCSSF 445 >UniRef50_C2JSZ5 Possible DNA-directed DNA polymerase (Fragment) n=3 Tax=Lactobacillus RepID=C2JSZ5_LACRH Length = 366 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 76/359 (21%), Positives = 124/359 (34%), Gaps = 19/359 (5%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVV---LSNNDGCVIARNAEAKA-LGVKMGDPWF 56 D +FYAS E + R + V + G V+A + K V + F Sbjct: 16 IMCIDCKSFYASVEAIRRGIHPLAADIAVLSKGDSPGGLVLAASPNCKKRYHVGLSTRRF 75 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE--IYSIDEAFCDLTGVRNCR 114 + +D + Y + + + + YSIDE+F D+T N Sbjct: 76 QLRD---DMQIELAEPRMADYISKNYGINRIYRQFTDDAHWYPYSIDESFIDVTHSHNLF 132 Query: 115 DL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + +I+ V + + VGI Q LAKLA K + Sbjct: 133 GSNQEIATQIQKRVFDQFGIITTVGIGQNPLLAKLALDNEAKKAAPWQ--ATWTYERVPE 190 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + + D W IG R +K+L+A+GI + DLA TD + + F V+ + G Sbjct: 191 TIWQLHDLADFWSIGSRTAKRLNAIGIHNLYDLAHTDRLLLHQRFGVLGDALYFHSWGID 250 Query: 234 CLQLEEFAPT---KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 L + S+ T + + A + A +LR +S Sbjct: 251 YSDLTRRYLPRAENKGYGNSQVLMRDYTQAREIEVVLSEIADQVAGRLRHHQVQGEVVSV 310 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 I + G A +K+ PT + D+I A + W GH + V + Sbjct: 311 GIGYADAEEAG-TSGFGAQMKI-DPTNRTDDLIRATRYLFHSKWN-GHAVRNVSVRVNR 366 >UniRef50_D0SQN6 Predicted protein n=1 Tax=Acinetobacter junii SH205 RepID=D0SQN6_ACIJU Length = 256 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 80/255 (31%), Positives = 144/255 (56%), Gaps = 2/255 (0%) Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 + L++ + V +VWG+GR+ KKL+ MG+++VLDL + + + I+K F++V+E+TV Sbjct: 2 DPCSTETLLAQVDVSEVWGVGRQNCKKLNTMGVQSVLDLINANPKEIKKQFSIVMEKTVL 61 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 EL+G C+ L + K++II SRS+G + + ++ ++ Y ARA +++R + C+ Sbjct: 62 ELQGLSCIDLSDDTVAKKQIISSRSYGNPVYEMDDIKASVRLYVARAVKRMREDGSICKM 121 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 I +I+TS F E Y V++ T D I AA + +D I++ G +Y+KAG++L Sbjct: 122 IGVYIQTSRFDKTER-YSPYIVVQMHEHTDDLLLITKAAMKGIDQIFKKGFKYKKAGIVL 180 Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA-GQGIQQQWQMKRAM 406 + Q +LF D + + E+L ++ ++ + G+ + + W M + + Sbjct: 181 LEITDQSKFVPDLFTDYSHKQERERLSDAIEAISERFGKNLVTLGIANNKEATWHMNQNL 240 Query: 407 LSPRYTTRSSDLLRV 421 SP Y T+ SDL RV Sbjct: 241 RSPSYLTKWSDLPRV 255 >UniRef50_A8BDY9 DINP protein human, muc B family n=2 Tax=Giardia intestinalis RepID=A8BDY9_GIALA Length = 675 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 62/396 (15%), Positives = 130/396 (32%), Gaps = 72/396 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A+ D + FYAS E P L GKPV++ + V N A+ GV+ P K Sbjct: 89 VIAVLDFDCFYASIEERDNPSLRGKPVIITGGS--IVCTSNYAARKYGVRSAMPTHVAKA 146 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-- 118 L + V+ ++ E Y +S+ ++ +DE +LT Sbjct: 147 LCKD--VIAIPASMEKYMSVSHAAAEVFAGYDTHYSMHGLDECVFNLTAYMKQYAHERYG 204 Query: 119 ------------------------------------------------FGREIRATVLQ- 129 E+ + + + Sbjct: 205 VVDMWSAYAHLDKQCADGALSTDADSIPLPAVQHTNTLFKEKPGFIELLAAEVVSAIRKD 264 Query: 130 ---RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER---QRKLMSALPVDD 183 R +T VG+A + +AK+ K + G + ++ + L + Sbjct: 265 IASRLGITCSVGVAINQQVAKILTELNKPDGQTIGPLHTVTQDNYSTILHSHLKDLHIRK 324 Query: 184 VWGIGRRISKKLDA--MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ--LEE 239 +WG+G ++ L I ++ D+ + + G +Q ++ Sbjct: 325 IWGVGDASAQLLSREPFMITSIGDIFLKRGLLSLLLTPAQAKFYIFASVGLSSVQQLMDP 384 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P + + +F E +D ++ + + A+KL+ ++ ++ ++ + Sbjct: 385 NNPNPKSVGQECTFPE-TSDEDVLKNILRNLCKLIAQKLQEQNLVPTRLNVKVRFAD--- 440 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 + + V L + D + AA +L I + Sbjct: 441 ---WIEKTHVVDLSRHSWDLDVLYLAALEALRYIQK 473 >UniRef50_D2RJB9 UMUC domain protein DNA-repair protein n=4 Tax=Bacteria RepID=D2RJB9_ACIFE Length = 493 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 78/482 (16%), Positives = 141/482 (29%), Gaps = 78/482 (16%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++ D+ +FYAS E V R D +VV + +A + KA G+ F Sbjct: 5 VYGAIDLKSFYASVECVERGLDPLDACLVVADRSRTDRTICLAVSPALKAWGIPGRPRLF 64 Query: 57 KQKDLFRRCG-------------------------------VVCFSSNYELYADMSNRVM 85 + + + + Y + S +V+ Sbjct: 65 EVIRQVEEMNALRRASLRGRSFTGRSYLASRLDRDKSLEVAYITAMPHMQRYMEKSAQVL 124 Query: 86 STLEELSP--RVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQ 141 + + +YS+DE DLT RE+ VL+ T +T GI Sbjct: 125 QIYLQFMAPEDIHVYSVDEVLLDLTPYLKSGGWTPHGLVREMIRQVLRETGITATAGIGT 184 Query: 142 TKTLAKLANHAAKKWQ---RQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 L K+A K + L+ ++ L P+ D W IG I++KL Sbjct: 185 NLYLCKVAMDIVAKHMEPDPDGVRIAALTERTYRQLLWDHCPMTDFWRIGPGITRKLQQY 244 Query: 199 GIKTVLDLADT---DIRFIRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQEIICSRS 252 G+ T+ +A D + F V E + G + + P + + Sbjct: 245 GMYTMGAVARMSLEDPDLLYHLFGVNAELLIDHAWGWEPCTLQDIRTYEPRSSSLGSGQV 304 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI-----------KTSPFALNE 301 + T R + A A L +H+ + + + + Sbjct: 305 LQQPCT-AEKARLLVWEMADLLALDLTKKHRVTDQLVMTLGYDRCNLEDPERRRSYRGKV 363 Query: 302 PYYGNSASVKLLT---------PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 V + T + I D I +K + + Sbjct: 364 TADHYGRPVPVHAHGSRNLPGGYTASGQVIRQETLALFDRIADPHLLIRKISLNAEHVRN 423 Query: 353 QGVAQ-----LNLF----DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 +LF R +QL + ++ ++ G+ L +Q + Sbjct: 424 PESLPVLRGETDLFVREPGPVYVRGREDQLQETILSIQSRYGKNVLLRGSNLLQGAMTRE 483 Query: 404 RA 405 R Sbjct: 484 RN 485 >UniRef50_Q4AAV0 DNA polymerase IV n=5 Tax=Mycoplasma hyopneumoniae RepID=Q4AAV0_MYCHJ Length = 385 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 72/365 (19%), Positives = 144/365 (39%), Gaps = 18/365 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-CVIARNAEAKALGVKMGDPWFKQK 59 + A D++ F+ S E P L G+P+V+ + D ++ + E K+ G K+ D + K Sbjct: 4 IIAHIDIDNFFVSSELKLNPKLKGQPIVISRSEDFAMAVSVSKEVKSKGFKISDKINEIK 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNCR-DLT 117 ++ N Y +S++ + + + S ++E+YSIDE F DLT +T Sbjct: 64 KKIP--NLLVIHPNINYYKFLSDQFFNFISKNFSKKIEVYSIDECFIDLTEYSRKFKSIT 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D I+ +++ L + +G++ K LAK+A + AK G++ +S + + + Sbjct: 122 DMLYFIKNKLVKNFRLPISIGLSYNKLLAKMATNLAK---NSEAGIMQVSTKKDVKAFIY 178 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDL--ADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + +++GIG + ++KL GI T+ D + I + V L Sbjct: 179 PQKIGNLFGIGIQNTEKLKKFGIITIQDFIQKGVNNEKIIEILGVNRYYFFHALTKIGDD 238 Query: 236 QLEEFAPTKQEIICSRSFGERI-TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + + R+ I + + + EKL+ ++ + F K Sbjct: 239 NVCDKLEKFKSVSHFRTLSGDILLTKKQILDGVSEFLLELVEKLKKFNKAANRVEFFFKL 298 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + S P+ D + ++ I G+ L Sbjct: 299 KNKEKDHFFSDIS------FPSNDYDFLYQNLLALVEKIENFSL-IHGFGITLSKISDYD 351 Query: 355 VAQLN 359 + LN Sbjct: 352 KSMLN 356 >UniRef50_C9SBX6 DNA polymerase IV n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SBX6_VERA1 Length = 631 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 72/437 (16%), Positives = 141/437 (32%), Gaps = 74/437 (16%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CE V +P+ V +IA N A++ G+ + + Sbjct: 43 VIAHIDLDAFYAQCEMVRLDTPEDQPLAV--QQWQGLIAINYPARSFGIGRHCTLAEARK 100 Query: 61 LFRRCGVVCF-----------------------SSNYELYADMSNRVMSTLEELSP---- 93 L + + Y S ++++ ++E P Sbjct: 101 LCPDLIAQHVATWREGDDKWAYRDDAAANITSDKVSLDPYRLQSRKILALIKETLPSDLQ 160 Query: 94 RVEIYSIDEAFCDLTGVRNCRD---------------------------LTDFGREIRAT 126 +VE SIDE FC L D ++ R +RA Sbjct: 161 KVEKASIDEVFCYLGPPVVALDWQADALIDLDEDAENQDPDWDDVAILIGSEIIRGVRAR 220 Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 + + H T GIA K L+KL + K Q+ + ++ +S + Sbjct: 221 IHEVLHYTCSAGIANNKMLSKLGSAHKKPNQQ------TVIRNRAVQQFLSDFKFTKIRN 274 Query: 187 IGRRISKKL-DAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTK 244 +G ++ + + TV DL T + ++ + +RG ++ Sbjct: 275 LGGKLGDTIVNTFNTDTVKDLLPTPLDQMKARLGDETGIWVYNTIRGIDQSEVNSRT-QI 333 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 + ++ ++SF I + + + A +L E + + L+ + Sbjct: 334 KSMLSAKSFRPSIHTPDQGNRWLRIFVADIFSRLVEEGV----LENKRRPKTINLHHRHG 389 Query: 305 GNSASVKLLTPTQ---DSRDIINAATRSLDAIWQAGH--RYQKAGVMLGDFFSQGVAQLN 359 G S + P D + + + A L I G + + +G F + Sbjct: 390 GQMKSRQGPIPQGKPIDEQGLFDLARNLLQQIVAEGKVWPCENLSLSVGGFEDGITGNMG 449 Query: 360 LFDDNAPRPGSEQLMTV 376 + ++ L Sbjct: 450 IGAFLVKGAEAQALRQA 466 >UniRef50_O17219 Polh (Dna polymerase eta) homolog protein 1, confirmed by transcript evidence n=3 Tax=Caenorhabditis RepID=O17219_CAEEL Length = 584 Score = 183 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 72/459 (15%), Positives = 140/459 (30%), Gaps = 99/459 (21%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG----CVIARNAEAKALGVKMGDPWF 56 + +L D++ FYA E P LWG+PV+V+ ++ ++A + EA+ GVK G Sbjct: 4 VISLIDMDCFYAQVEQRDNPSLWGQPVIVVQHSRQGIEGGILAVSYEARPFGVKRGMTVA 63 Query: 57 KQKDLFRRCGVVCFS-------SNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDL 107 + K + + ++ + Y D S V L + +E S+DEAF DL Sbjct: 64 EAKLKCPQISICHVPIGEYVDKADIQKYRDASAEVFRVLNNYDSQIIIEKASVDEAFLDL 123 Query: 108 TGVRNC--------RDLTDF---------------------------------------- 119 + N L +F Sbjct: 124 SAYTNQKLQELRENEGLEEFLQAAITYLPTTHLATGEDVKENEHLREDVLLEYIENARNC 183 Query: 120 --------GREIRATVLQRTH----LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + Q+ H G+ K +AKL K Q+ L Sbjct: 184 TENLLLLIAAVTVEQIRQQIHEETQFFCSAGVGNNKMMAKLVCARHKPRQQ------TLI 237 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAM-GIKTVLDLADTDIRFIRKHFNVVLERTV 226 R+++ P+ DV G G ++ ++ M I + +L + DI + + F E Sbjct: 238 PWFYVREILRLTPIGDVRGFGGKMGNRIQEMLNITLMGELLEVDISQLIETFPNQHEYLR 297 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEKLRSEHQY 284 G + I S++F + I +++ + A++L ++ Sbjct: 298 SVAEGHCDEPVRPRK-ESSSIAVSKNFPGKLSIRSVLELKKWLDGLTKELAKRLATDQAE 356 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH------ 338 + + + S + L + + ++ + + Sbjct: 357 NKRTAENLVYSLLTEDGKP-----QKTLKITSYHPDTLFEQIWAAMKGLNKTNATKNEDS 411 Query: 339 -----RYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 + F AQ + + + Sbjct: 412 GPWTPPILNISLSATRFQPGIPAQNRSIHEWLYEKKTRK 450 >UniRef50_D0MYB5 DNA polymerase kappa, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MYB5_PHYIN Length = 601 Score = 183 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 109/296 (36%), Gaps = 44/296 (14%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ E P L P+ V + N A+ GV+ P F K+L Sbjct: 86 IVVVDMDMFYAAVEMRDDPKLRDVPLAVGGLG--MISTTNYAARQFGVRAAMPGFIGKEL 143 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR------- 114 + N + YA ++ + + E P E +S+DEA DLT Sbjct: 144 CPD--LHFVPVNMKKYAGVAAEIRAVFAEYDPDFEAFSLDEACLDLTDYIAENWQKYISD 201 Query: 115 ----------DLTDFG--------------REIRATVLQRTHLTVGVGIAQTKTLAKLAN 150 D ++ RE+R V T LT GIA LAK+ + Sbjct: 202 AMDEIESKESDKEEWASTASGRAAIAAVVVRELRKKVFDCTQLTASAGIAVNSMLAKICS 261 Query: 151 HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADT 209 K + + ER + LPV + GIG+ + K L +A+ ++T DL D Sbjct: 262 DMNKPNGQYVLPF----SRERVMTFIRELPVRKIGGIGKVMEKTLNEALDVQTGGDLFDQ 317 Query: 210 DIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + ++ G + ++ R+F +R++D + + Sbjct: 318 RGKIAHLFSGKTAMWLLQTSLGVQERR---EKQERKSFSRERTF-KRLSDPKQLEE 369 >UniRef50_UPI000180C75E PREDICTED: similar to polymerase (DNA directed), eta n=1 Tax=Ciona intestinalis RepID=UPI000180C75E Length = 785 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 70/433 (16%), Positives = 133/433 (30%), Gaps = 87/433 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY E L GKP V+ N G +IA + EA+ GV Sbjct: 16 VVVLVDMDCFYVQVEQRRDSSLKGKPCAVVQYNQWKGGGIIAVSYEARDEGVTRNMRGDD 75 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K + ++ Y D V+ L + VE S+DEA+ DLT V + Sbjct: 76 AKAKCPEIILCKVPMANGKADLTRYRDAGAEVIQVLLQFGGVVERASVDEAYIDLTSVVD 135 Query: 113 --------CRDLTDFG-------------------------------------------- 120 DL G Sbjct: 136 ASMKEKRILPDLEQMGNTYVVGYPKDSCDDTTNARESGLSAYRDSANSDPDAERLLVAAA 195 Query: 121 --REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++R + Q+T GI+ K L+KL+ K ++ + L Sbjct: 196 IVEKMRLAIYQQTSFRCSAGISHNKMLSKLSCGINKPNKQ------TILPFNMVAGLFQT 249 Query: 179 LPVDDVWGIGRRIS-KKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQ 236 + + + +G ++ + + G++ + L + + + F G Sbjct: 250 IKIGKIRNLGGKLGKEIMFRFGVEKIGHLTNQTKQHLVDGFGEKTGLWLYEVCHGIDHEP 309 Query: 237 LEEFAPTKQEIICSRSF--GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 ++E Q + CS++F + + ++ + E+L + Q +S Sbjct: 310 VKERH-VAQSVGCSKNFTGNDALGSRNKVKHWVRCLTTELVERLNKDKQMNNRVS----H 364 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW--------QAGHRYQKAGVM 346 + S + + D DI +L+ + + G+ Sbjct: 365 ALTIHIGIKKPISRTCPISRY--DVDDITMRCLATLETLNTNQDKESDTWSPKITNIGIS 422 Query: 347 LGDFFSQGVAQLN 359 +F S G + + Sbjct: 423 AKNFQSIGKSSES 435 >UniRef50_C2EU55 UMUC domain protein DNA-repair protein n=3 Tax=Lactobacillus RepID=C2EU55_9LACO Length = 508 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 76/495 (15%), Positives = 139/495 (28%), Gaps = 91/495 (18%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWF 56 ++ D+ +FYAS E + + +VV + +A + K GV + Sbjct: 7 IYMAIDLKSFYASVECIAHHLNPLNANLVVADRSRTNKTICLAVSPALKQFGVPGRPRLY 66 Query: 57 KQKDLFRRCG--------------------------------VVCFSSNYELYADMSNRV 84 + + + R Y + S V Sbjct: 67 EVQQIVDRLNRERAKKATCHHLSKHSSIYRGKLLKSPNLRVGFRIVPPRMHFYMEKSAEV 126 Query: 85 MSTLEELS--PRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIA 140 + YSIDE D+T + ++I + T +T GI Sbjct: 127 YGIYLRFIKPENIHTYSIDEVMMDVTDYLHDHQVSPHTLAKQIIQQIQLETEITATAGIG 186 Query: 141 QTKTLAKLANHAAK---KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA 197 LAK+A R + ++ + +R L + P+ D W IGR +K+L+ Sbjct: 187 TNLYLAKVAMDIVAKRIPADRDGVRIAQMNEYQYRRYLWAHQPLTDFWRIGRGYAKRLEK 246 Query: 198 MGIKTVLDLADT---------DIRFIRKHFNVVLERTVRELRGEPC---LQLEEFAPTKQ 245 +G+ T+ D+A + + + F E + G ++ + + Sbjct: 247 LGLHTMGDIARCSLGKLSDPLNEEILYREFGKNAELLIDHAWGHETATITDIKNYHSEEH 306 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS---------- 295 I S+ Y A A + H I Sbjct: 307 GIYSSQVLMRP-YKYHEGLAAAQGMVDSVALSMVKRHVVSADFGIVINYDPQSLQYAPNY 365 Query: 296 ------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 F + A KL PT ++ + + +K +++ Sbjct: 366 QGPVVEDFYGRRTAKPSHAHQKLDLPTASGSELRQIYKQLYEKCVNPNLLIRKITLIVTH 425 Query: 350 FFS-------QGVAQLNLFDDNAPRPGSE-----------QLMTVMDTLNAKEGR-GTLY 390 Q+NLF+D E +L T + L K G + Sbjct: 426 MIDEDIAAKTPHFKQVNLFEDPQREIKQERVAAIKRQRDQKLQTTILKLQQKLGNKNVVL 485 Query: 391 FAGQGIQQQWQMKRA 405 + +R Sbjct: 486 HLADLKKGSTTKERN 500 >UniRef50_Q4A688 DNA polymerase IV n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A688_MYCS5 Length = 413 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 69/397 (17%), Positives = 153/397 (38%), Gaps = 23/397 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D ++++ S +P L KPV + S+ ++ + E K G K G Sbjct: 9 IFHIDFDSYFVSAVRTIKPYLKNKPVAIARSSYKSLAVSVSYELKVKGAKAGMTRGDILK 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTL-EELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 + + S ++ LY ++S ++ + L E++S ++ I S+DE + D+ + N + Sbjct: 69 IEP--NTIFVSEDFSLYTNLSRKIFAYLQEKISHKILIASVDECYLDVNHLVNDEKKALN 126 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + + +L+ + + +GI+ TK AK+ + K + ++L N + Sbjct: 127 LAKYTQRKILEVFDIPITIGISTTKWYAKMTTNLNKPFGIGLTNKMNLIN-------ILN 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF--IRKHFNVVLERTVRELRGEPCLQ 236 LP+ D +GIG+ + +KL + I + DL +I + + F + + L+ + + Sbjct: 180 LPIIDFYGIGKSLVEKLKTLKIYYIKDLYARNIEDLSLVEVFGTTAYKYLDALKFDKYEE 239 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + I SF + Q + A + +LR I+ + Sbjct: 240 IIPEIKKSKVIGHESSFENINIPQEEVLQRLKEIVALVSNRLRYSSLVSNTINVKAR--- 296 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-- 354 + + + K+ Q+ + A + + G + + S+ Sbjct: 297 ---IQSKKWFNKNKKIPQYCQEFKCFWKYAYEIYQKNY-ENKKLNSIGFSVSNLKSEYDL 352 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 LNLF+ + ++ ++++ TL Sbjct: 353 EINLNLFEKPIENSKAIEIANQINSIIKVNKVTTLGR 389 >UniRef50_A7TRR0 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TRR0_VANPO Length = 880 Score = 181 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 70/413 (16%), Positives = 129/413 (31%), Gaps = 36/413 (8%) Query: 2 FALCDVNAFYASCETVFRPDL-----WGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWF 56 D + F+A+ + D+ +V + + + + N A+ LG+K G Sbjct: 257 IFHVDFDCFFATVAALSVTDMAIDINKDAILVCHGSKNSDIASCNYVARNLGIKNGMWVS 316 Query: 57 KQKDLFRR-CGVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDLTGVRNC 113 + + L + ++C N+E S + L+ EL + SIDEA C ++ Sbjct: 317 RAEKLCPKGMKLICLPYNFEQIELKSKIFYNVLKELELFQLILPISIDEAICVISNPDPF 376 Query: 114 RDLTDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 DL IR V Q T TV +G A++ LA+LA K S++ Sbjct: 377 IDLNGVCETIRNLVHQETGGCTVSIGCAESLILARLALRLGKPDGYYVVNSN--SDIANN 434 Query: 173 RKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLAD-----TDIRFIRKHFNVVLERTV 226 + + D+ G G KL + IK L + + N E+ Sbjct: 435 VEFWKKFKITDLPGFGNATLNKLDEQFNIKDQNSLYNLQQLVINNDLKNILGNKTSEKLN 494 Query: 227 RELRGEPCLQ------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 L+G + + ++ + ++G R + + I A +KL + Sbjct: 495 LALKGLDDNESTKMIYDPDEVFKRKSLSMEINWGIRFENIGQVDVFIDRCAKYLVDKLIN 554 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ I + S + KL PT D I Sbjct: 555 MNSKIDQVTLKISRKAKSAPENPLKYMGMGLCDSFSKNSKLGLPTSDIGIIATEVKSLFR 614 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKE 384 + + + L + + + K Sbjct: 615 MLSCPPTELRGVSIQFNKLIDTNDVDYRL----KLPFKKIIVDDTFNKIPEKL 663 >UniRef50_UPI0001850634 polymerase (DNA directed) iota n=1 Tax=Nasonia vitripennis RepID=UPI0001850634 Length = 635 Score = 181 bits (458), Expect = 6e-44, Method: Composition-based stats. Identities = 78/454 (17%), Positives = 134/454 (29%), Gaps = 89/454 (19%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 DV+ FYA E + P+ GKP+ V V+ N EA+A GVK + L Sbjct: 26 IVHIDVDYFYAQVEMMRHPEFQGKPLGV--QQKNIVVTCNYEARAFGVKKCMLIEEALRL 83 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR------- 114 +V + Y MS +++ L + + VE +DE F D+T V N Sbjct: 84 CPSLILVKGE-DLTPYRRMSAKILELLHQFTSSVEKLGLDENFIDVTSVVNEYTTRIGNN 142 Query: 115 -----DLTDFGREIRATVLQR--------------------THLTVGVGIA--------- 140 + RE V Q + +A Sbjct: 143 SKSSQHDENTTREESTFVQQEDMDHCMPVGKIFSTPEEECPCGCHTRLAVASSIAMDMRS 202 Query: 141 ---------------QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 K LAKL K Q+ + L S V + Sbjct: 203 KILNELGLTCSAGIAHNKLLAKLGGAVNKPNQQT-----VVYPCSAASLLSSLGSVSKIP 257 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPTK 244 G+GRR ++ L A I TV D+ T + ++ L R G ++ Sbjct: 258 GVGRRTAESLTANNILTVDDVRKTPLERLQVKIGKELARKIKDYAEGIDDTPVKPSGRP- 316 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP------FA 298 Q I F ++++ + + + R E + + + ++ A Sbjct: 317 QSIGLEDGF-KKVSLVDEVESRLSALLRRLTELAAEDGRIPICLKLTVRKQDSINKPAAA 375 Query: 299 LNEPYYGNSASVKLLT------------PTQDSRDIINAATRSLDAIWQAGHRYQ--KAG 344 + S + + D I+ + + + G Sbjct: 376 GSSTGKRESRQCAIPSHLVPSSKGAKGTHLYDHTKILALVMKLFHRVVDISKPFHLTLLG 435 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 + F + + N + + +VMD Sbjct: 436 LAFTKFQEEKCSGKN--SIASFLRKQVAVQSVMD 467 >UniRef50_C5J784 DNA polymerase IV n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J784_MYCCR Length = 387 Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 74/394 (18%), Positives = 150/394 (38%), Gaps = 28/394 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-CVIARNAEAKALGVKMGDPWFKQK 59 + A D+N F+ S E +P+L +PV + ++ ++ + + K G K+ D + K Sbjct: 4 IIAHIDINTFFVSAEIRLKPELKKQPVAIARSDKFAMAVSISKQVKEKGFKITDKLSQIK 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMS-TLEELSPRVEIYSIDEAFCDLTGV-RNCRDLT 117 +V N + Y +S + ++ S ++EIYSIDE F DL+ +N R + Sbjct: 64 SAIPD--LVIIKPNLKYYQFLSKKFFQYIVKNFSKKIEIYSIDECFVDLSKFAKNFRTIK 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 I+ + L +GI+ K LAK+A + AK T + + + + Sbjct: 122 SMIYYIKNKIETDLELPCSIGISYNKFLAKMATNLAK----NTRENIFILPRSKIETHIY 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLAD--TDIRFIRKHFNVVLERTVRELRGEPCL 235 LP+ ++GIG+ S+ L+ + T+ D + + + K + L + Sbjct: 178 NLPIQQLFGIGKSTSRLLNEKKVYTIKDFLNLGINNEILIKIMGTTRNYFYQNLLEKGDD 237 Query: 236 QLEEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + + +F D + + + KL+ + I + Sbjct: 238 VILDKESHFKSVSRFNTFLSSETIDAKQIALITKEFCSDLLTKLQMYQKNTARIEIYYHN 297 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + L TP+ D I ++ I + + GV +Q Sbjct: 298 YLGKTIRYWK------NLDTPSNDFNFISTELLFLVEKIDNYNN-IKGFGVRFSKLANQK 350 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 FD + +++ ++ +NA+ G + Sbjct: 351 ------FDSTMTKSKVKKI---INKINAQHGSKS 375 >UniRef50_A4E7R3 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E7R3_9ACTN Length = 523 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 69/321 (21%), Positives = 121/321 (37%), Gaps = 17/321 (5%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + D+ FYAS E V R + +VV + +A K LG+ F+ Sbjct: 30 YICIDLKTFYASVECVDRGLNPLTTNLVVADESRGRTTICLAITQAMKDLGIHNRCRLFE 89 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR- 114 D + + Y ++S ++ E V +YSIDE F D+T + Sbjct: 90 IPD---GIDYIKAVPRMQHYMEVSAQIYGIYLEYVSPQDVHVYSIDECFIDVTPYLDLYH 146 Query: 115 -DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 D +R VL RT +T VGI AK+A K GV L + ++ Sbjct: 147 TDAEGLACTLRDEVLARTGITATVGIGPNLFQAKVALDVTAKHVASRIGV--LDDETFRK 204 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 ++ P+ D+WGIG ++ +L+ G+ ++ +A D + V E + G Sbjct: 205 EIWPHRPITDIWGIGPGVAARLEKYGVYDLMGVAALDENLLYDELGVNAEYLIDHAFGRE 264 Query: 234 CLQLEEFAPTKQEIICSRSFGERITD---YPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + + + S + G+ ++ Y + A L +H C IS Sbjct: 265 PTTIADIQAYRPQ-ATSTTTGQVLSKGYAYEQAYTVLREMVDNAVLDLVDKHVVCDSISL 323 Query: 291 FIKTSPFALNEPYYGNSASVK 311 F+ + + S + + Sbjct: 324 FVGYASERADIRRLDASGTAQ 344 >UniRef50_C3ZXE4 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3ZXE4_BRAFL Length = 488 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 77/415 (18%), Positives = 134/415 (32%), Gaps = 61/415 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPV----VVLSNNDGCVIARNAEAKALGVKMGDPWF 56 + DV+ FYA E + P L KP+ +V C I V Sbjct: 4 VIVHIDVDCFYAQVEMIRDPSLRDKPLDGGKMVSFLQVFCDITCGY----FCVHFIINLQ 59 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV------ 110 + K + + Y +V +TL++ SP VE DE F D+T Sbjct: 60 QSK--VP----ITNDKQTDEYVTYPFQVTNTLQKFSPLVERLGFDENFVDVTETVEARVK 113 Query: 111 ----------------------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 + + EIR + +T GIA K LAKL Sbjct: 114 SAFSPQLNGHIFPEIEIEDERHKRLACGSQIAAEIREALHSDLGITCCAGIAHNKLLAKL 173 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV-DDVWGIGRRISKKLDAMGIKTVLDLA 207 K Q+ + KLM L ++ GIG R K+L +GI TV +L Sbjct: 174 VAGQHKPNQQTSLL------PGGVGKLMGTLKTARNIPGIGSRTFKRLQTLGISTVQELQ 227 Query: 208 DTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 D ++ F + + + RG + P Q I SF ++ + ++ Sbjct: 228 DAPADTLQAEFGSQTAQVMQQLCRGVDPSPVTPTGPP-QTISDEDSF-KKCGSFQDAKKR 285 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP---TQDSRDII 323 + ++L+ + ++ + ++ A N+ S + + TQ I Sbjct: 286 MTGLLQSLMKRLKGDGRFPHVLRVTVRKLS-ASNKWTNRESRQCAIPSHLFGTQAEETIS 344 Query: 324 NAATRS---LDAIWQAGHRYQ--KAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 + H + + ++ ++ + P S Q+ Sbjct: 345 KLLDLCVVLFCKMVDVNHPFHLTLINICFAKLEARSKQSASIKNFFQNEPTSAQI 399 >UniRef50_B7GU73 UMUC domain protein DNA-repair protein n=32 Tax=Bacteria RepID=B7GU73_BIFLI Length = 548 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 84/529 (15%), Positives = 146/529 (27%), Gaps = 125/529 (23%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E R D +VV +A + K G+ F+ Sbjct: 14 YIAIDLKSFYASVECAARGLDPLTTHLVVADETRTDKTICLAVSPSLKNYGIPGRARLFE 73 Query: 58 QKDLFRRCGV-------------------------------VCFSSNYELYADMSNRVMS 86 K + V Y ++S +V Sbjct: 74 VKQRLNGVNIERAVHAPGGRLIGESCDARDLERSPRLKASMVIAKPRMAHYLEVSGQVYG 133 Query: 87 TLEELSP--RVEIYSIDEAFCDLTGVRN--CRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 + + + +YSIDE F D+T R I +L T +T GI Sbjct: 134 IYLKYAAPEHIHVYSIDEVFIDVTPYLRSLGMGPHAMARTIVREILDETGITATAGIGSN 193 Query: 143 KTLAKLANHAAKKWQRQTG---GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 LAK+A K + +L + +R L + P+ D W +GR ++KL+ G Sbjct: 194 MYLAKVAMDIVAKHMPADRDGVRIAELDEMSYRRLLWNHRPLTDFWRVGRGYARKLERAG 253 Query: 200 IKTVLDLADT---------DIRFIRKHFNVVLERTVRELRGEPCLQLEE---FAPTKQEI 247 + T+ D+A + + + F V E + G ++ + + P I Sbjct: 254 LTTMGDIARCSVGRASDYYNEDLLYRMFGVNAELLIDHAWGWEPCEIADIRSYEPGAHSI 313 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS------------ 295 + D+ + R A A L + ++ + Sbjct: 314 SSGQVLTGP-ADWHTARLIAKEMADALALDLVDKGVMTNRLTLAVGYDIGSLDASKLDSC 372 Query: 296 --------------PFALNEPYYGNSA--------SVKLLTPTQDSRDIINAATRSLDAI 333 + S+ L T + I A T + I Sbjct: 373 ADRAMRRAAERAAKTYQGPVTVDRFGRRVPKSAVGSIGLGDFTSSAARIREAMTMLYERI 432 Query: 334 WQAGHRYQKAGVMLGDFFSQG-------VAQLNLFDDNAPRP------------------ 368 A ++ V+ D + QL+LF D+ Sbjct: 433 VDARLLVRRLTVVADDVATPKELAAGKRYEQLDLFGDDGDMRYDCDSTESGGDGSGRMPA 492 Query: 369 -----------GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 + + + K GR + A R Sbjct: 493 CGDDAAAQTLAREHDIQRALLDVKRKFGRNAVIKAMDMEDGATGQDRNR 541 >UniRef50_Q6FV13 Similar to uniprot|P12689 Saccharomyces cerevisiae YOR346w REV1 DNA repair protein n=2 Tax=Eukaryota RepID=Q6FV13_CANGA Length = 887 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 70/451 (15%), Positives = 144/451 (31%), Gaps = 70/451 (15%) Query: 2 FALCDVNAFYASCE-TVFRPDLW---GKPVVVL--SNNDGCVIARNAEAKALGVKMGDPW 55 D + F+A+ P + K V+V+ +N+ + + N A+ G+K G Sbjct: 258 VFHIDFDCFFATVAYLTKDPSIKCDIEKDVIVVCHGSNNSDIASCNYVARGYGIKNGMWV 317 Query: 56 FKQKDLFRR-CGVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDL----- 107 K L + +V N++ S TL +L + SIDEA C + Sbjct: 318 GHAKRLLPQGVNIVTLPYNFDEIQAKSEIFYKTLAAMKLFDMILPISIDEAICVVVNTHP 377 Query: 108 --------TGVRNCRDLTDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQR 158 G +L ++IR ++ T +V +G A + LA+LA K Sbjct: 378 ISQESANTDGGSQSSNLDQLCKDIRLSIFSATNGCSVSIGCADSLLLARLALRKGKPNGY 437 Query: 159 QTGGVVDLSNLERQR-------KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL----- 206 + + E+ + + ++ + D+ G+G I KL + D+ Sbjct: 438 F------IIDREQVQGSKDGSNEFLATFKLKDLPGVGHSIVTKL--LTAFKCKDMNLAEL 489 Query: 207 -ADTDIRFIRKHFN-VVLERTVRELRGEPCLQ------LEEFAPTKQEIICSRSFGERIT 258 + F++ + + L+G+ + E ++ + ++G R Sbjct: 490 KQRASLEFLKNCVGVKLGTKIYLALQGQDDEESTRMLFDPENYFERKSLSIEINWGIRFD 549 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS---------PFALNEPYYGNSAS 309 + + I KL + ++ + + + + Sbjct: 550 NIHEIDDFIDRCCDYLLNKLNELERKTSQLTLKVMRRAANAPVDPPKYMGMGRCDAFNRT 609 Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV----AQLNLFDDNA 365 +L PT + I A ++ + + + NLFD Sbjct: 610 SRLGIPTNEHGTIATEAKAMYRSLACPAKELRGLSIQFNKLSKLDESLSNVRSNLFDLLQ 669 Query: 366 PRPGSEQLMTV-----MDTLNAKEGRGTLYF 391 P + L D++ + +L Sbjct: 670 KTPKMD-LSPTRSPIDFDSIEKRSPPKSLKK 699 >UniRef50_UPI000038E47A DNA polymerase IV n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E47A Length = 350 Score = 177 bits (449), Expect = 6e-43, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 16/283 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D + FYA E + P + KPVVV + N G V N A+++G+K G P Sbjct: 4 IIFIDFDYFYAQVEEIMDPSIKDKPVVVCVYSGRTENSGAVATSNYIARSIGIKSGMPLP 63 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRD 115 + ++ + V + Y + S+RVM+T+ S ++EI SIDEA+ D+TG + +D Sbjct: 64 QAMNIGKD-KAVFIPIRKDFYKEFSDRVMNTISTYSDKMEIASIDEAYLDVTGECSTFQD 122 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 G EI+ + + + V GI+ K +AK+ AK + + + Sbjct: 123 AVKLGEEIKEEIFKEYGMKVSAGISINKAIAKILGDMAKPDGLKY------IDESMVEEF 176 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPC 234 ++ L V + GIG +SKKL+ GIK + D+ + + + + V Sbjct: 177 LNTLEVKKIPGIGSILSKKLNDAGIKYLKDILGANRQAMIEILGNARYNYLVEIAENRYN 236 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 +EE ++ + E D + + A K Sbjct: 237 SPVEE--RIRKNYGRYITLPENTRDTNIIMPLLRKAVDSAFSK 277 >UniRef50_Q6R286 SOS inducible DNA polymerase (Fragment) n=15 Tax=Enterobacteriaceae RepID=Q6R286_ECOLX Length = 395 Score = 177 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD Sbjct: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG Sbjct: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW Sbjct: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 Score = 97.5 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 126/126 (100%), Positives = 126/126 (100%) Query: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS Sbjct: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL Sbjct: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 Query: 390 YFAGQG 395 YFAGQG Sbjct: 390 YFAGQG 395 >UniRef50_C2KQG7 ImpB/MucB/SamB family DNA-damage repair protein n=2 Tax=Mobiluncus mulieris RepID=C2KQG7_9ACTO Length = 545 Score = 177 bits (448), Expect = 8e-43, Method: Composition-based stats. Identities = 83/524 (15%), Positives = 151/524 (28%), Gaps = 119/524 (22%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++ D+ +F+AS E R D +VV +A + K GV F Sbjct: 16 IYMAIDLKSFFASVEARERGLDPMNTNLVVADETRTEKTICLAVSPALKTFGVPGRPRLF 75 Query: 57 KQKDLFRRCG-------------------------------VVCFSSNYELYADMSNRVM 85 + + + +LY + S V+ Sbjct: 76 EVIAQVKAVNRDRARRASQHRLAGSSYYLDELRANPALAVDYLVARPRMKLYMETSATVL 135 Query: 86 -STLEELSP-RVEIYSIDEAFCDLTGVRNCRDLT--DFGREIRATVLQRTHLTVGVGIAQ 141 L +SP V +YSIDE F D TG T +F ++ V T +T GI + Sbjct: 136 SRYLHWVSPADVHVYSIDEVFIDATGYLERYRATPVEFATKLIHDVYAHTGITATAGIGE 195 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSN---LERQRKLMSALPVDDVWGIGRRISKKLDAM 198 LAK+A K V L+ + +L + P+ D W +G ++KL+AM Sbjct: 196 NLYLAKVAMDILAKHAEADEHGVRLAELTMRTYREQLWTHRPLTDFWRVGPATARKLEAM 255 Query: 199 GIKTVLDLA---------DTDIRFIRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQE 246 + T+ D+A + + + F V E + G ++ + P + Sbjct: 256 DLFTMGDVARASLGERYDRANEEALYRIFGVNAELLIDHAWGWEPTTIADIKSYHPQAKS 315 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI-----------KTS 295 + + ++ R + A + L + + + + + Sbjct: 316 VNVGQVLPRA-YEFGEARMIVREMADGLSLDLVDKGLTTDQVVLTVGYDTENLADPARAA 374 Query: 296 PFALNEPYYGNSA--------SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + S L T +R ++ A TR + I G ++ V Sbjct: 375 TYRGEVKRDHYGRLIPKPVHGSENLGRATASTRLLLEAVTRLFERIVDPGLLVRRMYVSA 434 Query: 348 GDF----------------------------------FSQGVAQLNLFDDNAPRP----- 368 QL+LF D Sbjct: 435 SHIRREEALVPRVDVVDVADGSGVVGGTGGFMSGEPKSPGVGEQLDLFTDYEALAAVEAV 494 Query: 369 ------GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 + + + K G+ ++ + R Sbjct: 495 EQAALVAERRNQEALLRIKRKFGKNAVFRGVNLSAGATALDRNR 538 >UniRef50_D2VGP4 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VGP4_NAEGR Length = 485 Score = 177 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 62/408 (15%), Positives = 126/408 (30%), Gaps = 65/408 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAK-ALGVKMGDPWFKQK 59 + D++ FYA E V P P+ + + + N + + + Sbjct: 15 VIIHLDLDCFYAQVEEVENPKYRDLPLGI--QQNQTISTVNYCGRIKYKIPKMTRVKQAL 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELS-------PRVEIYSIDEAFCDLTGVR- 111 ++ ++ + E+Y + S ++ +E+ IDEA+ ++T Sbjct: 73 EMCPE--LIVIPARMEIYREESRKIFDECIGECVNSFHGDCVLEVCGIDEAYINVTDEVN 130 Query: 112 ------------------------------NCRDLTDFGREIRATVLQRTHLTVGVGIAQ 141 + + EIR V T+ GIA Sbjct: 131 WRLENATELGIDVKDHRGRKVSKSVNSQDNHLNIGSQIAEEIRCNVFNSLGYTISAGIAH 190 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG-I 200 +K L+KLA+ K + L E + +++ V + +G +KL + I Sbjct: 191 SKFLSKLASKKQKPNGQA------LIYSESFDEEINSQDVSIIPNVGYTTKQKLAELCQI 244 Query: 201 KTVLDLADTDIRFIRKHFN--VVLERTVRELRGEPCLQLEEFAP--TKQEIICSRSFGER 256 TV L I K FN + + G+ + + + I +F Sbjct: 245 STVKQLRAQTYVNIIKCFNSDKAAIKVLNIANGKFDEEYDRVVSKGPPKSIGSELTFLT- 303 Query: 257 ITDYPSMRQAICSYAARAAEKLRS---EHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 I Y Q + + +++ + ++ + +PY+ S + Sbjct: 304 IQTYEDFEQKLRTITGDLFTRIQRDLKRNSNRYATKLTLRYCHGSYRDPYHSVSCKITSN 363 Query: 314 TPTQ-------DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 D +I + + + Q+ GV + DF Sbjct: 364 IYNNLNNYEEKDESNIHSLVIKMFKQKVSLPFKLQRMGVSVSDFVEPP 411 >UniRef50_A7AX68 ImpB/MucB/SamB family protein n=1 Tax=Babesia bovis RepID=A7AX68_BABBO Length = 1246 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 52/417 (12%), Positives = 134/417 (32%), Gaps = 49/417 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVV----LSNNDGCVIARNAEAKALGVKMGDPWFK 57 D++AF+ S + L P+ + N+ + N A+ GV G Sbjct: 432 IFHIDMDAFFVSVAIKGKQHLKNMPLCISYGTGRNSASEIATCNYAARVYGVSKGMWVRD 491 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 L + ++++ D + +++ E++ ++ S DE + + + D+ Sbjct: 492 AVQLCP--SLQFVKYDFDVINDTAMKILKIASEVTNKIYSASCDELYLEYSIESESNDIV 549 Query: 118 D---FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD-------LS 167 + + + T + +GI LAKLA+ K + + V + Sbjct: 550 EYISMAVNLAHKIETETECPLSIGIGDNMMLAKLASQRCKALKHGSEEVPTGYVLSGNVC 609 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTV 226 ++ ++++ + ++ G+G R L + G D+ D +++ + + Sbjct: 610 AIQDVEAFIASVSLHELPGVGDRTLDILKSCGYVYCSDI--HDKEELKELIGEKLGDTVY 667 Query: 227 RELRGEPCLQLEEFAP-----TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 RG+ + + I + ++G RIT + + + + +++ + Sbjct: 668 HFSRGKDFRNMNTAEARSRILKNKTITSAINYGVRITTTEQVHEYMRELVKQVWDRVEAA 727 Query: 282 -----------------------HQYCRFISTFIKTSPFALNEPYYGNSASVK--LLTPT 316 R ++ + + ++SV L++ Sbjct: 728 LTHLKEESTDNNSLEVPVAQIMLKVRVRSPEASVEPAKYMGCGLCDEFTSSVSGDLMSQK 787 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 R +++ A + + + + N D +L Sbjct: 788 SVFRSLLSCWQNLFAKKPFALEDLRGISLGIYRIKKGDCKERNTMDKFLVAATPSRL 844 >UniRef50_C6VKK8 UV-damage repair protein n=17 Tax=Bacteria RepID=C6VKK8_LACPJ Length = 507 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 69/494 (13%), Positives = 139/494 (28%), Gaps = 91/494 (18%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E V D +VV + +A + K GV F+ Sbjct: 7 YMAIDLKSFYASVECVAHQLDPLNANLVVADTSRTDKTICLAVSPALKQFGVPGRPRLFQ 66 Query: 58 QKD----------------------------LFRRCGV----VCFSSNYELYADMSNRVM 85 + L + + Y S + Sbjct: 67 VEQRVATLNRARGRQTSYQAVRRHRSIYRDQLLKHANLGIDYRVVPPRMSYYMQKSAAIY 126 Query: 86 STLEELS--PRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQ 141 + +YSIDE F D+T + + + + T +T GI Sbjct: 127 DIYLRFIKPEHIHVYSIDEVFMDVTDYLSTFQVSPHALAKTMIHEIQAETGITATAGIGA 186 Query: 142 TKTLAKLANHAAK---KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 LAK+A + + + ++ L + P+ D W +G +K+L A+ Sbjct: 187 NLYLAKVAMDIVAKKIPADADGVRIAQMDEQQYRQYLWAHEPLTDFWRVGHGYAKRLAAL 246 Query: 199 GIKTVLDLADT---------DIRFIRKHFNVVLERTVRELRGEPC---LQLEEFAPTKQE 246 G+ T+ D+A + + + F E + G+ ++ + ++ Sbjct: 247 GLNTMGDIARCSLGTLSDSHNEEQLYREFGKNAELLIDHAWGDESATIADIKNYHASEHG 306 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS----------- 295 I S+ Y + + +L + H + I Sbjct: 307 IYASQVLMRP-YTYTEGQAVLRGMVNNLTLELVARHVVTDQLGIRIDYDANASSVGTHYQ 365 Query: 296 -----PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 + + +V L + ++ A + + ++ VM Sbjct: 366 GAVTEDYYGRQVPKPAHTTVTLAQASASQHELGAAYQQLYQQVVNRQLMVRRVTVMANHL 425 Query: 351 FSQG-------VAQLNLFDDNAPRPGSEQ-----------LMTVMDTLNAKEGR-GTLYF 391 + Q NLF++ E+ L + L + G + Sbjct: 426 VDEQQVRRQPRYQQTNLFENPEVAQAQERDAQRKRERDGQLQRAILKLQRRSGNKNVVIR 485 Query: 392 AGQGIQQQWQMKRA 405 ++R Sbjct: 486 LADLKPSSTTIERN 499 >UniRef50_UPI0000397F7C COG0389: Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Actinobacillus pleuropneumoniae serovar 1 str. 4074 RepID=UPI0000397F7C Length = 278 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 108/297 (36%), Gaps = 27/297 (9%) Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFGREIRATVLQRTH 132 LY +S ++ + VE+ S+DEA+ D+T R C T +EIR + H Sbjct: 1 MPLYKAVSEQIHQIFRRYTDIVELLSLDEAYLDVTDCRQCSGSATWIAQEIRDAIWNELH 60 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 LT GIA K LAK+A+ K + + + E + LP+ + +G+ + Sbjct: 61 LTASAGIAPLKFLAKIASDQNKPNGQF------VISPENMTAFIYDLPLKKIPRVGKVTN 114 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 +KL +G+ T D+ +D FI K F +R ++ E ++ + + Sbjct: 115 EKLAQLGLHTCGDIQHSDKAFIYKTFGKFGQRLWEFSHAIDNRKI-EANRPRKSLAVENT 173 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEH-----QYCRFISTFIKTSPFALNEPYYGNS 307 I Q + + +L+ Q + ++ +K F Sbjct: 174 LPTDIWHLAEAEQIVDELFKKLVFRLQRNWGERSLQEFKKLAIKLKFGDFT--------- 224 Query: 308 ASVKLLTPTQ--DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 L T I + + + G+ + + QLNL++ Sbjct: 225 -QTTLERTTDGLSRERFIELLQQVWQRTNR--RSVRLIGLSVHYPTEKVKKQLNLWE 278 >UniRef50_B2I405 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I405_ACIBC Length = 228 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 90/222 (40%), Positives = 136/222 (61%), Gaps = 5/222 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D+N YAS E F P L KP+++LSNND ++AR+ EAK LG++MG P FK KD Sbjct: 5 IFALIDINNCYASIERFFNPQLIDKPIIILSNNDTSIVARSDEAKLLGIRMGVPVFKIKD 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLTGVRNCRDLTD 118 + +R VV SSNY +Y +MS R S + + +E+YSIDEA+ LT + DLT+ Sbjct: 65 IIKRNNVVMLSSNYTVYGEMSRRFHSIINQFVTDQEMEVYSIDEAWLLLTNYESLFDLTE 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ--RKLM 176 + I+ + + L V VG+ ++KT AKL N AKK + GV DL N++ + Sbjct: 125 YAHTIKKEIFRLIGLPVSVGLGRSKTEAKLGNFLAKKMKHFN-GVCDLVNMDPLIKEDIF 183 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF 218 +P+++VWG+G +I+K+L+ G +V DLA + +I+ + Sbjct: 184 QDIPLNEVWGVGSQIAKQLNNFGFSSVYDLAVANPVWIKNNL 225 >UniRef50_A0DAQ7 Chromosome undetermined scaffold_43, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0DAQ7_PARTE Length = 521 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 64/444 (14%), Positives = 131/444 (29%), Gaps = 82/444 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++A+YA E +P V + +IA N A+ G+K G + Sbjct: 7 VYIHIDMDAYYAQAEQKLLNIPEDQP--VCARQWNSLIAINYPARDAGIKRGMLSEEAIK 64 Query: 61 LFRRCGVVCF---------------------------SSNYELYADMSNRVMSTLEELSP 93 L + + Y S + +T++ Sbjct: 65 LCPNVMLPHVETFKVIDGKMVFSTLKDKYIQHNQYEEKVSLRYYRQESKLIFTTIKRFCN 124 Query: 94 RVEIYSIDEAFCDLT-------------GVRNCRDLTD---------------FGREIRA 125 VE DE + ++ G D + IR Sbjct: 125 CVEKGGTDEGYIQVSEKELEDIEAQQFYGHLMKELPEDYQLTEQDHLLRRASLLCQNIRD 184 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + T GI+ K LAKLA+ K ++ + + +S + ++ + Sbjct: 185 AIYTETKYKCSAGISFNKMLAKLASATNKPNKQ------TIILECMLPECISNIGINKIR 238 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL-EEFAPTK 244 G G ++ + L G+KTV I ++ F + +LRG + +E Sbjct: 239 GFGGKVQEALLESGLKTVGQAQTLSIYELQSLFGDKAQYIYDKLRGYDDEIVKKEVDLKN 298 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKL----RSEHQYCRFISTFIKTSPFALN 300 + I+ ++ ++ + + Q++ ++ + + + Sbjct: 299 KSILSLKNI-KKTSSREVIIQSLELILHDITMRVTDYYEDSNLVPSVLVIHY----HNVE 353 Query: 301 EPYYGNSASVKLLTPTQDSR-DIINAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQGVAQL 358 + + S + L P + R I L+ I G+ F Sbjct: 354 KGSHQKSEPIYLTLPIESFRLTIEERVHSILNQIQDNEMFPLIHIGISCRYFKPMIQGIQ 413 Query: 359 N---LFD----DNAPRPGSEQLMT 375 N +F + +L Sbjct: 414 NPITMFFKKILEQQEYEKQAKLAE 437 >UniRef50_O48585 Similarity to DNA-damage-inducible protein P n=2 Tax=Arabidopsis thaliana RepID=O48585_ARATH Length = 955 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 60/292 (20%), Positives = 99/292 (33%), Gaps = 52/292 (17%) Query: 2 FALCDV---------NAFYASCETVFRPDLWGKPVVVLSN----NDGCVIARNAEAKALG 48 D+ + F+ S R +L KPV V + + + N A+A G Sbjct: 314 IIHIDLLFESVKYFQDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYG 373 Query: 49 VKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT 108 VK G KDL + +V N+E Y E S DEAF D++ Sbjct: 374 VKAGMFVRHAKDLCPQ--LVIVPYNFEAYE-----------------EALSCDEAFLDVS 414 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 + + IR +L+ T + GI T +A+LA AK + + Sbjct: 415 DLSDVE-TEVLASTIRNEILETTGCSASAGIGGTMLMARLATRVAKPAGQLY------IS 467 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 E+ + + LPV + G+G + +KL I+T L I+K E T Sbjct: 468 AEKVEEFLDQLPVGTLPGVGSVLKEKLVKQNIQTCGQLRLISK--IKKRKKDAEEPTKYM 525 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 G+ + S + D +++ ++ Sbjct: 526 GCGDCDN-----------LSRSITVPAATDDIEVLQRISKKLFGSFCLDVKE 566 >UniRef50_B8NVT6 DNA-directed polymerase kappa, putative n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8NVT6_ASPFN Length = 573 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 68/366 (18%), Positives = 137/366 (37%), Gaps = 54/366 (14%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+A+ E + RP+L P Sbjct: 117 IVHVDCDAFFAAVEELDRPELKTVPFA--------------------------------- 143 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTDF 119 ++C N++ Y+ + + + + P E SIDEA+ ++T N D D Sbjct: 144 -----LICLPINHQKYSAKAQEIRAIFAQYDPLFESASIDEAYLNITAYCTENQIDPEDA 198 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +RA VL++T ++V GIA +AK+A++ K + ++ + + M L Sbjct: 199 VNRMRAEVLEQTKISVSAGIAANAKIAKIASNRNKPNGQFR----VPNDRDAILEFMKDL 254 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV V G+GR ++LDA+GIKT D+ + + G +++ Sbjct: 255 PVRKVNGVGRVFERELDAVGIKTCGDIYSQRALLAKLFGEKAFHFLAQCYLGLGRTKIQP 314 Query: 240 -FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F E + ++R+ + + A + L R + +K + F Sbjct: 315 VENYERKSVGTESTFNE-MGGKEALREKLWAIAQELEKDLTRTEFKGRTLVLKVKLATFE 373 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVA 356 + S + ++D+ + L+ + + R + G+ + S Sbjct: 374 V------LSRQCQPPKAVFLAKDLYTFSLPMLEKLEKEIPNMRLRLLGLRCTNLVSTKKG 427 Query: 357 QLNLFD 362 ++ F Sbjct: 428 GIDFFG 433 >UniRef50_B4H4B7 GL20704 n=1 Tax=Drosophila persimilis RepID=B4H4B7_DROPE Length = 811 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 90/270 (33%), Gaps = 58/270 (21%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S P+ G P+ V + G Sbjct: 273 IMHIDMDCFFVSVGLRSHPEWRGLPIAVTHSKGGNAATDVPVHPQADRQAELKLFAERFE 332 Query: 37 ------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+A G++ G + L + Sbjct: 333 HQLHDNIRADKVRSGFDKKMSLSEIASCSYEARAKGIRNGMFVGQALKLCPELKTI--PY 390 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQR 130 ++E Y +++ + T+ + + +E S DE F DLT + D+ F +R V + Sbjct: 391 DFEGYKEVAFALYDTVAQYTLNIEAVSCDEMFVDLTDLVEDLQVDVMSFVAHLREEVRNK 450 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T G+ K LA++A AK + G M+ ++ + G+G Sbjct: 451 TGCPCSAGVGTNKLLARMATKRAKPDGQYLLGPGT-----DVLGYMAPTALETLPGVGSS 505 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNV 220 + KL+ G++ D+ T + V Sbjct: 506 LRHKLEQAGLRNCADVQRTQTGRRLNRWWV 535 >UniRef50_Q5Q9H1 Polymerase kappa isoform 8 n=14 Tax=Eumetazoa RepID=Q5Q9H1_MOUSE Length = 547 Score = 171 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 68/411 (16%), Positives = 117/411 (28%), Gaps = 85/411 (20%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL----------SNNDGCVIARNA--EAKALG- 48 D++AFYA+ E P+L KP+ V V A AK L Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGSMSMLATSNYHARRFGVRAAMPGFIAKRLCP 161 Query: 49 ----VKMGDPWFKQKDLFRRCGVVCFSSNYELY-----------------------ADMS 81 V ++ + + + N+ Sbjct: 162 QLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAXLNITQHLQERQDWPEDKRRYF 221 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL------------------------- 116 ++ + L+ +PR E + E ++ + Sbjct: 222 IKMGNYLKIDTPRQEANELTEYERSISPLLFEDSPPDLQPQGSPFQLNSEEQNNPQIAQN 281 Query: 117 --------TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 + +EIR + Q+T LT GIA LAK+ + K + L + Sbjct: 282 SVVFGTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQ----ILPS 337 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 + LP+ V GIG+ K L A+GI T +L + Sbjct: 338 RSAVMDFIKDLPIRKVSGIGKVTEKMLMALGIVTCTELYQQRALLSLLFSETSWHYFLHI 397 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G L ++ + R+F E I+ A A L+ E R + Sbjct: 398 ALGLGSTDLA-RDGERKSMSVERTFSE-ISKTEEQYSLCQELCAELAHDLQKEGLKGRTV 455 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 + +K F + + + + + +I A L G Sbjct: 456 TIKLKNVNFEVK------TRASTVPAAISTAEEIFAIAKELLRTEVNVGSP 500 >UniRef50_Q6DCL9 Polh-prov protein n=4 Tax=Tetrapoda RepID=Q6DCL9_XENLA Length = 684 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 63/428 (14%), Positives = 124/428 (28%), Gaps = 76/428 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E P L KPVVV+ G +IA + EA+A GV Sbjct: 8 VVALVDMDCFYVQVEQRMNPALKNKPVVVVQYKTWKGGGIIAVSYEARAFGVTRNMFADD 67 Query: 58 QKDLFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-- 110 K L + ++ Y + S VM + + VE SIDEA+ DLT Sbjct: 68 AKKLCADLQLARVREAHGKADLTHYREASVEVMEVMSRFA-VVERASIDEAYIDLTDSVQ 126 Query: 111 --------------------------------------RNCRDLTDFGREIRATVLQRTH 132 L + + Sbjct: 127 KRLREMGVAPISGELLKNTYVQGFPQCGMDRDSLSKEELRRHGLEQWLESLPVGDPHSAD 186 Query: 133 LTVGVG--------IAQTKTLAKLANHAAKKWQRQTGGVVDLSNL--------ERQRKLM 176 + + VG A + + + L+ L Sbjct: 187 VKLAVGAIIVEEMRAAVEEETTFQCSAGIAHNKVLAKLACGLNKPNRQTILCQGSVPGLF 246 Query: 177 SALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPC 234 S LP+ + +G ++ + + ++ + L ++ ++ HF + RG Sbjct: 247 SELPIGKIRHLGGKLGTSIKEILDVEYIGQLTQFTVQHLQNHFGDKTGSWLYSLCRGIED 306 Query: 235 LQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS-TF 291 ++ + I CS++F + ++ ++ + + +L+ + ++ Sbjct: 307 EPVKPRQLP-KSIGCSKNFPGKTSLSTREQVQYWLLQLSLELEGRLQKDRDANNRVAKLL 365 Query: 292 IKTSPFALNEPYYGNSASVKLLTP-----TQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 Y S L + D+ ++ + + + Sbjct: 366 TVGLNQMGKRLYGSMSRCCALTRYDAQKISSDAFVLLKSFNAAGMHQAAWSPPLTLLQLS 425 Query: 347 LGDFFSQG 354 F S Sbjct: 426 ASKFSSTE 433 >UniRef50_D0NYK2 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NYK2_PHYIN Length = 525 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 69/403 (17%), Positives = 118/403 (29%), Gaps = 75/403 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E G+PV V G ++A N +A+ GV+ GD K Sbjct: 9 VIIHLDLDCFYAQVEQRRLHIPDGQPVAV--QQWGSLLAVNYDARKFGVERGDFIDDAKK 66 Query: 61 LFRRCGVVCF------------------SSNYELYADMSNRVMSTLEELSPRVEIYSIDE 102 + + + Y S + + L + P +E SIDE Sbjct: 67 KCPQIHLPHVDTLGKNCKPGQLFDRTHQKAILRRYRIASRDIFAILGSMVPIIEKASIDE 126 Query: 103 AFCDLTGVRNCRDLTD---------------------FGREIRATVLQRTHLTVGVGIAQ 141 AF D+T + R REIR + + T GIA Sbjct: 127 AFMDVTDMAKERIAQTVYFCQDPANHDTKRLLCIGAVISREIRQAIYNKLGYTCSTGIAG 186 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG-- 199 K LAKLA+ K + + + LM +LP+ + G+G ++ K+L+ G Sbjct: 187 NKLLAKLASPLNKPNGQVVVASRFVID------LMKSLPMRKIRGLGGKLGKQLETAGES 240 Query: 200 -----IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 T L I + +G + E + +I Sbjct: 241 FKKLSAHTFLQ-RCGLIELAKHVGQETAAYVHSICQGSDDNEPVEEKKVQVKITG----- 294 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 + + E + + + S KL Sbjct: 295 ------------VRLLCEEVVIRCEDERIENKRFPSQLSIQFIRAKPGEKP--RSYKLGI 340 Query: 315 PTQDS-RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + ++ AA + + + +F Sbjct: 341 GQDTTVDELYTAAMNVMRLHVGSMFPMATLIMNAKNFHELDSQ 383 >UniRef50_Q17IT1 Terminal deoxycytidyl transferase rev1 n=1 Tax=Aedes aegypti RepID=Q17IT1_AEDAE Length = 650 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 101/299 (33%), Gaps = 19/299 (6%) Query: 90 ELSPRVEIYSIDEAFCDLTGVRNCRDL--TDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + +E S DE F DLT + N + DF IR + + T G+ + A+ Sbjct: 32 RYTLNIEAVSCDEMFVDLTDLINDVGVDVMDFVGYIRDQIRESTECPCSAGVGANRLQAR 91 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 +A AK + E + M +P+ D+ GIG + +L + T DL Sbjct: 92 MATKKAKPNGQYYLA------PETVLEYMRDIPISDLPGIGPSTTYRLKQLSWSTCGDLQ 145 Query: 208 DTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 I +++ F + RGE L + ++ + ++G R + + + Sbjct: 146 FVPISVLQREFGKKFGDTIYHACRGEDDRPLV-YDQVRKSVSVDVNYGIRFKEEAEVERF 204 Query: 267 ICSYAARAAEKLRSEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQ 317 + ++L + + I+ ++T+ F + + S T Sbjct: 205 MKQLTEEIHKRLMEIKKRGKVITVKLLVRSPEAPVETAKFMGHGLCDIITKSHPFKDYTC 264 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 D I A + I H + G+ L F + + + + Sbjct: 265 DLAVIEKAVLMLMKQIAAPPHELRGIGLQLSKFDEKKSSVDSKNSLKTMFEKAAAKQEA 323 >UniRef50_B9SQ81 DNA polymerase eta, putative n=1 Tax=Ricinus communis RepID=B9SQ81_RICCO Length = 560 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 70/434 (16%), Positives = 124/434 (28%), Gaps = 115/434 (26%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E +P L G P V+ N G +IA + EA+ GVK + Sbjct: 13 IIAHVDMDCFYVQVEQRKQPQLRGLPTAVVQYNEWKGGGLIAVSYEARKFGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT---- 108 K++ + +V ++ +Y + + V+S L R E SIDE + DLT Sbjct: 73 AKEVCPQILLVQVPVARGKADLNVYRNAGSEVVSILARKG-RCERASIDEVYLDLTDSAE 131 Query: 109 ------------------------------GVRNCRDLTDFG------------------ 120 G D+ ++ Sbjct: 132 AMLKDTPPNSLDVIDDEVLKSHVLGLKNENGNDAKEDVREWLCRNDADHRDKLLACGAII 191 Query: 121 -REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 E+R VL+ T T GIA K + K+ Sbjct: 192 VAELRMQVLKETEFTCSAGIAHNKMDCNILFDCRKQ------------------------ 227 Query: 180 PVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQL 237 +G ++ L +G+ TV DL ++ + + RG ++ Sbjct: 228 -------LGGKLGSSLQNELGVDTVGDLLQFSEEKLQDRYGINTGTWLWNIARGINGEEV 280 Query: 238 EEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEK----LRSEHQYCRFISTF 291 + + +SF + S++ + +E+ L + ++ Sbjct: 281 QGRLLP-KSHGSGKSFPGPQALKTIASVQHWLNQLCEELSERLCSDLEQNKRMAHTLTLH 339 Query: 292 IK-TSPFALNEPYYGNSASVKLLTPTQ----DSRDIINAATRSLDAI--------WQAGH 338 + S S L T D+ ++ A R G Sbjct: 340 ASAYKSSDSDSHKKFPSKSGPLRYGTAKIQEDAFNLFQAGLREYLGAHGVKVLGSHHNGW 399 Query: 339 RYQKAGVMLGDFFS 352 V Sbjct: 400 GITGLSVSANKIID 413 >UniRef50_A4EK23 DNA polymerase IV-AMBIGUITY n=3 Tax=Rhodobacteraceae RepID=A4EK23_9RHOB Length = 452 Score = 167 bits (422), Expect = 9e-40, Method: Composition-based stats. Identities = 89/406 (21%), Positives = 144/406 (35%), Gaps = 26/406 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D ++F+A+ E F P L G+PV V+ + IA + EAKALGVK + Sbjct: 21 LYLDFDSFFATAEQHFNPALRGRPVGVVPLDSPHTGCIAISREAKALGVKSMARIADTRR 80 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + ++ + +++Y + NR++ + + P + SIDE C L Sbjct: 81 IVPD--MIFVVARHDVYVRLHNRIVDVVNTVVPVAHVRSIDEVVCHLLPSEAREG-RALA 137 Query: 121 REIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+A + LT +GIA T+ LAK+ A K L L ++ Sbjct: 138 DRIKAALAAAFSPELTCSIGIAPTELLAKIGAEAHKPDG------FALIELADLPASLAH 191 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQL 237 + +DD+ G+ + K+L A G+ L + R + V ER EL G+ +L Sbjct: 192 IALDDLPGVSDGMEKRLQAAGVTDFQSLWALAPKQARAIWRSVEGERFWNELHGQHAERL 251 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 K+ SR + A AA +LR ++ K + Sbjct: 252 PT---QKRMFGHSRMLPADWRTPQKVTICARQLALGAARRLRRADLRATKLTLGFKGGGY 308 Query: 298 ALNEPYY----GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 L D + A A G + VML + Sbjct: 309 RGRSGSRKDDLRWDWEGHFLPTRDDHTVLATLAQGLDAAQRAVGFPPRSVSVMLHGLIAN 368 Query: 354 GVAQLNLF-----DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 +LF + E + +MDTL + G + GQ Sbjct: 369 EQMTNDLFLTPTAPEQINISRWEAVSDLMDTLRQQHGPEAISLGGQ 414 >UniRef50_B2VTY6 Sister chromatid cohesion protein Eso1 n=8 Tax=Leotiomyceta RepID=B2VTY6_PYRTR Length = 714 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 75/496 (15%), Positives = 151/496 (30%), Gaps = 113/496 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CETV KP+ V +IA N A+A G+ + Sbjct: 45 VIAHVDLDAFYAQCETVRLGIDPSKPLAV--QQWQGLIAINYPARAFGLSRHVTSTEALK 102 Query: 61 LFRRCGVVCF-----------------------SSNYELYADMSNRVMSTLEELSP---- 93 + + + Y S +++ ++E+ P Sbjct: 103 QCPELILQHVATWKEGDETWAYHENSFKDMATHKVSLDPYRQESRKILKCIKEILPDKDQ 162 Query: 94 RVEIYSIDEA---------------FCDLTGVRNCRDLTD-------------------- 118 RVE SIDE + +L G D T+ Sbjct: 163 RVEKASIDEVFMDLSAQVHTILLERYPELRGPAPYDDPTERLPKVPTTVLDWAADALVET 222 Query: 119 ----------------------FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 R++R + T GIA+ K L+KL + K Sbjct: 223 GEEDGEDRDPDWDDVCMVIASEIVRDVRKHIKDTLGYTCSGGIARNKMLSKLGSGYKKPN 282 Query: 157 QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM-GIKTVLDLADTDIRFIR 215 Q+ + + +S + + +G ++ ++ AM G V DL + + ++ Sbjct: 283 QQ------TVIRNRAVKHFLSDMKFTKIRMLGGKLGDEVVAMFGTDKVRDLVEQPLDQLK 336 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + + +RGE ++ + ++ ++SF I + + + + A Sbjct: 337 RLGDDTGTWIHSIIRGEDNSEVNPRT-QIKSMLSAKSFRPAIHSFEQGVRWLRIFVADIF 395 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ---DSRDIINAATRSLDA 332 + E + + L+ + S + P + + A L Sbjct: 396 SRCVEEGV----LENKRRPKSINLHHRQGAQTRSRQAPIPQGKPLSETILFDLAKNLLAQ 451 Query: 333 IWQAGH--RYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT--VMDTLNAKEGRGT 388 + G + +G F + ++ +M+ +M + Sbjct: 452 VVVDGRAWPCSNLSLSVGGFEDGITGNKGIGGFLVRGEEAKAMMSSTMMTAIG------- 504 Query: 389 LYFAGQGIQQQWQMKR 404 A G + + +R Sbjct: 505 -RSASSGGEPPAKKRR 519 >UniRef50_B6VBS6 Putative uncharacterized protein n=1 Tax=Caenorhabditis sp. PS1010 RepID=B6VBS6_9PELO Length = 975 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 61/308 (19%), Positives = 104/308 (33%), Gaps = 75/308 (24%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCV----IARNAEAKALGVKMGDPWF 56 + L D++ FYA E +PDLWGKPV+V+ ++ V +A + EA+ G+K G Sbjct: 674 IIGLIDMDCFYAQVEQRDQPDLWGKPVIVVQHSRQGVLGGILAVSYEARTFGIKRGMTVT 733 Query: 57 KQKDLFRRCGVVCFS-------SNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDL 107 + K V ++ + Y D S V L + VE S+DEAF DL Sbjct: 734 EAKAKCADLNVCHVPIGEYADKADIQKYRDASAEVFEVLNNIDSNIIVEKASVDEAFLDL 793 Query: 108 T----------------------GVRNCRDLTDFGREIRATV------------------ 127 + + D D + Sbjct: 794 SIYIEKILEVEQETELSDIIGALPTTHIADGNDKKETEEERIDRIAKFYEETKSDENQKK 853 Query: 128 ---------------LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 ++T GI K +AKL K Q+ + + Sbjct: 854 LMIAAIAIEDIRAKIREKTQFYCSAGIGNNKMMAKLVCARHKPRQQ------TIIPFQYV 907 Query: 173 RKLMSALPVDDVWGIGRRIS-KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 R ++ P+ D+ G G ++ K ++ + IKT+ ++ + + + F E G Sbjct: 908 RDILKVTPIGDIRGFGGKMGTKIMEMLKIKTMGEILTIEFERVVEAFPEQHEYLKCVAEG 967 Query: 232 EPCLQLEE 239 + Sbjct: 968 YDDEPVHF 975 >UniRef50_A4HNL7 DNA damage repair protein, putative n=3 Tax=Leishmania RepID=A4HNL7_LEIBR Length = 624 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 118/362 (32%), Gaps = 52/362 (14%) Query: 2 FALCDVNAFYASCETVFRPD---LWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 F D++AF+ S + +P+ L KPV + + + + N A++ G+ G Sbjct: 63 FLHVDMDAFFCSV-QLAKPEYAHLRTKPVGIAAGKYNSDISSCNYLARSYGIHAGMYVNS 121 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-----VEIYSIDEAFCDLTGVRN 112 K+ +V + E ++ + + E P +E+YSIDE T + Sbjct: 122 AKERCPE--LVTLGHDLEACERVAKTLYRIIFESFPASVKMSMEVYSIDEVML-ATDTTD 178 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 L F +R + T T GI LA++A K + + + + Sbjct: 179 YGLLQSFCEAVRKELFSTTGCTASCGIGPNIMLARVATDCCKPNG------ILVVHAKDV 232 Query: 173 RKLMSALPVDDVWGIGRRISKKLDA-------------MGIKTVLDLADTDIRFIRKHFN 219 + M++LP+ + G G +K+ G T + +++ Sbjct: 233 PQTMASLPLKYIHGAGESTMEKICRALREQHVIDENTDAGDVTCGSVQRLRREVLQRILG 292 Query: 220 VV-LERTVRELRGEPCLQLEEFAPTKQE----------IICSRSFGERITDYPSMRQAIC 268 E +RGE + ++ + + CS ++ R D + + Sbjct: 293 KRHGETFYHLVRGEDSRVVTRTGDSEDQRHLGKRTPSVVGCSMNYAVRPEDIEDVWGIVR 352 Query: 269 SYAARAAEKLRSEHQYCRFISTFI---------KTSPFALNEPYYGNSASVKLLTPTQDS 319 KL+ + + + + +T + +KL Sbjct: 353 QLLDHVCAKLQRANTVAQGLRITLLERHPLYPKETQKYMGRGKCVEVHLPIKLPHAMAAD 412 Query: 320 RD 321 Sbjct: 413 EV 414 >UniRef50_Q4DBR5 DNA damage repair protein, putative n=4 Tax=Trypanosoma RepID=Q4DBR5_TRYCR Length = 615 Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 61/415 (14%), Positives = 123/415 (29%), Gaps = 46/415 (11%) Query: 1 MFALCDVNAFYASCETV--FRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFK 57 +F D++AF+ S + KPV + + + + N A++ GV+ G Sbjct: 64 LFVHLDMDAFFCSVVLAKEENAHMREKPVCIAAGKGNSDISSSNYIARSFGVRAGMYVNA 123 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-----VEIYSIDEAFCDLTGVRN 112 K+L + S + ++ + L EL P VE+YSIDE + Sbjct: 124 AKELCP--NLQVLSYDLPRCEEVIKCLYRLLFELCPDKVCIAVEVYSIDEVMIAFDTENH 181 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + + + + T+ T GI L+++A AK + + Sbjct: 182 DV-VKSYCANVLRQLELTTNCTASCGIGPNIMLSRIATQYAKPNGVYS------ILPQDV 234 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAM--------GIKT----VLDLADTDIRFIRKHF-N 219 +L+ +P ++ G+G KL + I + + +++ Sbjct: 235 PELVGHMPFVEIHGVGSCTMTKLRPLLRPYLKDADISDDDILCCHVQKLSKQQLQRALGQ 294 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQ----------EIICSRSFGERITDYPSMRQAICS 269 E RG Q+ + + CS ++ R + + Sbjct: 295 KSGENFFHLCRGHDTRQVSRTGDEENQRMLGKKTPTSVSCSMNYAVRPLTLDDVWGILRE 354 Query: 270 YAARAAEKLRSEHQYC---RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII-NA 325 K+ R + + G V+ P + + + Sbjct: 355 LLEVVCGKMDRGGYTSSGLRVTLLERHPLHPKETQKFMGRGRCVEFHVPINFEKPLRSSE 414 Query: 326 ATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 L + + D +L L DD R + + + Sbjct: 415 LELMLSQVKDVVTPLFVLDRQMSDEER--ARELGLEDDAESRVIWTVSLKTVKDI 467 >UniRef50_A8JCD8 DNA polymerase eta/iota n=1 Tax=Chlamydomonas reinhardtii RepID=A8JCD8_CHLRE Length = 873 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 52/306 (16%), Positives = 109/306 (35%), Gaps = 47/306 (15%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D++ FY E +PV V +IA N A+A GV + K L + Sbjct: 28 DLDCFYCQVEQKRLGIPREQPVAV--QQWDGLIAINYAARAAGVTRHMRVREAKKLCPQL 85 Query: 66 GVVCFSSNYELYAD------MSNRVMSTLEEL---------------------------S 92 +V + + S ++M+ L + Sbjct: 86 RLVHVETISAGDGESGSPVKASGQIMALLGSMLRPSAAATAATAAGGGAATATGPVSGGG 145 Query: 93 PRVEIYSIDEAFCDLTGVRNC--RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLAN 150 +E S+DEAF D++ + C + +R V ++ T G++ K LAK+ + Sbjct: 146 CLLEKASVDEAFLDVSPLVACSPCGGGLIAQRLRRAVYEQLGFTCSAGVSVNKLLAKVGS 205 Query: 151 HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADT 209 K ++ L + +++ LP+ + G+G ++ L+ +G T A Sbjct: 206 ARNKPDKQ------TLVLPRGVQDMLTDLPLGKLRGLGGKLGAALEGQLGAATAGQAAAL 259 Query: 210 DIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAIC 268 + +++ + +RG+ + + ++ +SF E + +++ + Sbjct: 260 PLEALQRVLGERSGLWVWQVVRGQCSEPVTPKDKP-KSLLSCKSF-EPTSAPAELQRWLL 317 Query: 269 SYAARA 274 A Sbjct: 318 ILAEEL 323 >UniRef50_D1BE66 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BE66_SANKS Length = 346 Score = 162 bits (409), Expect = 3e-38, Method: Composition-based stats. Identities = 75/360 (20%), Positives = 126/360 (35%), Gaps = 21/360 (5%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D +AF+AS RP+L P+ V++ V + N A+ALGV G Sbjct: 7 LHADADAFFASVVLRSRPELVAVPMAVVA--HVFVASANYPARALGVTGGMLADDALRQH 64 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 +V + + + E + VE S++EAF D+ G + Sbjct: 65 PGLVLVDVPR--AEVEEAGDALFDLFHECARAVEPGSVEEAFLDVGASDWDA-AVAAGHD 121 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +R L V VG+ +TK +AKLA+ A K + ER+ +L +ALP+ Sbjct: 122 LRRRAAAELGLPVSVGVGRTKLMAKLASRATKPDGLH------VIGPEREAELRTALPLG 175 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE-RTVRELRGEPCLQLEEFA 241 +VWG+G +L +G++ + DL D +++ + R R G + Sbjct: 176 EVWGVGAATRDRLANLGVQRLGDLDDVPRALLQQACGTAMARRLWRIRDGTDDATVRTVE 235 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 + G D + + S A RA + + ++ + Sbjct: 236 ARSVISAEGATSGYGRADLSTA-DLVASCAVRACRRAARAGLVAAGLVLTLRAEGGSPVV 294 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 L T D++ A + V L G+ Q LF Sbjct: 295 VK------RSLAEATSSPEDVLPVARDLVATALAD--EVATVRVSLTGLLPAGLVQQTLF 346 >UniRef50_B7QI10 DNA polymerase eta, putative n=2 Tax=Ixodes scapularis RepID=B7QI10_IXOSC Length = 727 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 65/335 (19%), Positives = 99/335 (29%), Gaps = 90/335 (26%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + +L D++ FY E P+ GKP V G +IA N EA+ALGVK G + Sbjct: 9 VISLVDMDCFYVQVEQRLAPEWKGKPCAVAQYNTFQGGGLIAVNYEARALGVKRGMRGEQ 68 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 L + + ++ Y D V+S L + V+ SIDEA+ DLT V Sbjct: 69 ALKLAKDLHLFRVPEQRGKADLTRYRDAGAEVLSVLCQFGAVVQRASIDEAYLDLTPVVT 128 Query: 113 ------------------------------------------------CRDLTDFGREIR 124 IR Sbjct: 129 AQATFPSPDSLPSTHVVGYPEERGVRSREEAVAEWLSTIVDPGGGDSLLARGCALVERIR 188 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW-------------------------QRQ 159 A VL++T G+A K LAKL K Sbjct: 189 AAVLEQTGFDCSAGVAHNKVLAKLVCGLHKPRQQTVLPHSAVPTLFATLPVLAKLVCGLH 248 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF- 218 + L + LPV + +G ++ + + L + F Sbjct: 249 KPRQQTVLPHSAVPTLFATLPVHKLRNLGGKLGEDVREK-------LQVSQDYLCLSVFG 301 Query: 219 NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 + + + RG + Q I C ++F Sbjct: 302 HRTGQWLYKLARGVDDEPVTCRKLP-QSIGCGKNF 335 >UniRef50_C5LMV6 Dna polymerase eta, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LMV6_9ALVE Length = 945 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 81/365 (22%), Positives = 133/365 (36%), Gaps = 40/365 (10%) Query: 2 FALCDVNAFYASCETVFR---PDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWF 56 + LCD ++F+A + P+ KP+ V+S + + N A+ GV Sbjct: 496 YMLCDFDSFFACVAQLQATGVPE-STKPMAVVSGMGRGSEICSANYAARKYGVSGSMWLA 554 Query: 57 KQKDLFRRCGVVCFSSNY-ELYADMSNRVMSTLEELS----PRVEIYSIDEAFCDLTGVR 111 + K L V +S +++ + + RV S+DEA D++G Sbjct: 555 EVKALCPDLEKVPVTSELLTQCNTAWKQMLRLMAVVGGGTLDRVVAKSVDEAIVDVSGEC 614 Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 D + ++ V Q T L VG+A + LAK+A AK + Sbjct: 615 GYSDEAAVAQALQKAVTQATGLPCSVGVADSHVLAKVATTQAKPRGIKVL---------N 665 Query: 172 QRKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIR--KHFNVVLERTVRE 228 + ++ LP+ + +G R KL G+ T+ DL D +I + ER + Sbjct: 666 DKSFLADLPLHMLPQVGYRTLGKLQNEFGLATIGDLLDPNIAPLLADSFGAKTAERMLTN 725 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 RGE + + ++FG R S RQ + + A+ L + Sbjct: 726 ARGEDYR--NDLVTDISTVSADKNFGIRNVTPESARQLVRALVAQVMPLLE--GLVPERV 781 Query: 289 STFIKTSP--------FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRY 340 + +P F Y S S + T DI A LD + HR Sbjct: 782 ILRLYLAPDDWVEPFKFMGIGACYQWSRSCAV---TPSKNDIAALAIGLLDGV--EVHRI 836 Query: 341 QKAGV 345 + AGV Sbjct: 837 RGAGV 841 Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 73/418 (17%), Positives = 130/418 (31%), Gaps = 75/418 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKAL-GVKMGDPWFKQK 59 + AL D++ FYA E P VV + V+A + A+ L GV+ G + Sbjct: 7 VIALFDLDCFYAQVERRRLGIPSSVPFVV--SQWDMVLAVDYSARKLPGVQRGALTSIAE 64 Query: 60 DL-FRRCGVVCFS---------------------SNYELYADMSNRVMSTLEELSPR--- 94 + V + + Y + S VM L P Sbjct: 65 KAGAKSAHVEVVDVVTGETFPDGPPPGEPRDRYRVSLDRYREASEEVMRALRTALPESAP 124 Query: 95 VEIYSIDEAFCDLTGVR----------------------NCRDLTDFGREIRATVLQRTH 132 +E SIDE F DLT + ++ + +R V T Sbjct: 125 LERASIDEVFVDLTSLCEEEQEEQMPAGIKWAAGEVGNSALQEGAIWAERLRKEVESITG 184 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 T+ G+A + LAKLA K V + + M+ + V + G+GR Sbjct: 185 FTMSAGVASNRQLAKLACGVNKPDA------VTALSDNKILDFMAGVKVKSLRGVGRATF 238 Query: 193 KKLDAM-----GIKTVLDLADTDIRFIRKHFNVVLERTVREL-RGEPCLQL-----EEFA 241 ++++ G ++ N L ++ RG ++ + + Sbjct: 239 HDIESLLPCLTGDTKCGEIWPVLDELDPDPANAELVAWLKLASRGRDPVENAKPVKDSES 298 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR-SEHQYCRFISTFIKTSPFALN 300 + S+ F + + M+ I S A +++R Q+ + + + Sbjct: 299 LKAGSVSASKIFRPYLKEAAKMQFWIESLAKDVVDRVRGRAPQFPKSLCVSLGR-----E 353 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S + P D I A + + + R V D Q Sbjct: 354 ATATYATKSRRCPMPALDKVII--TAQQMAAPLIASFGRVGMITVTALDLQDPPAHQP 409 >UniRef50_D1C5S3 DNA-directed DNA polymerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5S3_SPHTD Length = 397 Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats. Identities = 77/414 (18%), Positives = 138/414 (33%), Gaps = 31/414 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 A + F E + RP+L G+P+V+ V EA A G++ G + Sbjct: 5 IACVSIPHFALRVEVLERPELDGRPLVLATPPGGRNLVDDCTLEAIAAGIRPGLSLREVT 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTD 118 L V N A + R+++ LE LSP VE + + DL G+ R+ Sbjct: 65 ALCPDA--VVVQPNPVRDAAVFERIVTRLEGLSPLVEPAAPGCCYVDLRGLDRHYGSPER 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + V L GIA K A++A A G + E ++ Sbjct: 123 AAARLLQAVPPL--LRPRAGIAPGKFAARVAAGQAAP------GGWHIVAPEDVATFLAD 174 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+D + + + ++L+ +G++T+ DLA+ ++ F R +G + Sbjct: 175 KPIDWLP-LPPDMLRRLERLGLRTMRDLAELPAHAVQARFGPEGRRAWELAQGLDSDPVR 233 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + ++ S T ++ A+ RA + + R Sbjct: 234 PRERAE-SVVVELSLPAPATSRDALMIALRQLVTRAFARPALHGRGVRQARLRAHLEGGR 292 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 L P R I A + + L + Q Sbjct: 293 ------SWEHVATLREPAGRERLID--ALGHRLQAVTLPAPLEALTLELTGLTAVAAHQE 344 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW----QMKRAMLS 408 LF + QL+ + L + G +Y + + W + +RA++S Sbjct: 345 TLFG--TRPRRARQLIEAIRQLKQRYGTSPIYRVVEV--EPWSRIPERRRALIS 394 >UniRef50_B9Q7A7 Terminal deoxycytidyl transferase rev1, putative n=3 Tax=Toxoplasma gondii RepID=B9Q7A7_TOXGO Length = 2497 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 54/287 (18%), Positives = 94/287 (32%), Gaps = 48/287 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND---------GCVIARNAEAKALGVKMG 52 D +AF+ + RP L PV V + V + N A+A GV G Sbjct: 768 ILHVDFDAFFVAVALKKRPHLKNFPVAVAHSRGSGGKAASSTSEVASCNYTARASGVYKG 827 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + K+ G++ +++ + S + + + +LS R+ S DE + L Sbjct: 828 QWLGEAKERCP--GLITLPYDFDGIEEASEGLFACVLQLSRRILPVSCDETYVQLLLAPR 885 Query: 113 CRDLTD--------------------FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA 152 + + E+R + +RT V +G AKLA Sbjct: 886 NGESNEETEGLADGSESGEAEKAILDACVELRQRIFERTGCWVSIGAGPNLLAAKLAGLQ 945 Query: 153 AKKWQ-----------RQTGGVVDLSNLERQR-KLMSALPVDDVWGIGRRISKKLDAMG- 199 AK GV + E M +P+ + G+G + +K++ G Sbjct: 946 AKPKASSSSSSSSSSSLSRDGVCVIRPRESFLWAFMDQVPLRKLPGVGSMLGEKVEKAGR 1005 Query: 200 IKTVLDLADTDIRFIR----KHFNVVLERTVRELRGEPCLQLEEFAP 242 ++ + IR +R G L F+P Sbjct: 1006 LRLCGQVMKEGIRSLRVLQNLLGRKRGAMIWWMAHGCDPRPLPPFSP 1052 >UniRef50_Q828V5 Putative uncharacterized protein n=3 Tax=Streptomyces RepID=Q828V5_STRAW Length = 324 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 61/326 (18%), Positives = 109/326 (33%), Gaps = 21/326 (6%) Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRT 131 +Y ++ LEE +P VE D A DL G +F IR L Sbjct: 11 PPMYEAALPGLLGLLEEFTPVVEALPPDGALVDLRGAERYFGRGTVEFASLIRVRALAHY 70 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN--LERQRKLMSALPVDDVWGIGR 189 + +G LA++A A GV + + + ++ PV + G+G Sbjct: 71 GIDCAIGAGPGPMLARMALRDAVP------GVTRVVPEEPDAVAEFLAERPVVALPGVGH 124 Query: 190 RISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEII 248 ++ L G+ T+ +A + +++ + G ++ + + Sbjct: 125 ATARTLCEYGLDTLGKVAAAPLSTLQRLTGARTGRELREKASGIDRGRVVP-NAVSRSLT 183 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 R F D R+A+ S +LR+ Q CR ++ ++ + + Sbjct: 184 AERPFPRDEVDPSRHRRALLSVTEELGTRLRTLEQVCRTLTLTVRYAD------RSSTTR 237 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL-FDDNAPR 367 S L PT S + A R +A+ R + + A L FD Sbjct: 238 SRTLAEPTAHSAALTATAYRMYEALGLQRARVRAIALRAEGLSPAEDAAHQLTFDPV--D 295 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAG 393 ++ V D AK G + Sbjct: 296 EKVRRIEEVADRARAKFGPRAIVPGA 321 >UniRef50_C4VB58 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4VB58_NOSCE Length = 554 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 78/431 (18%), Positives = 128/431 (29%), Gaps = 70/431 (16%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D+++FYASCE++ P+ P+ V S N + N A+ GVK G P + K Sbjct: 86 IYCHVDLDSFYASCESLDHPEYKSIPLAVGSMN--MLTTSNYVARKYGVKAGMPGYIGKQ 143 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC---RDLT 117 L + ++ Y S RVMS L +EIY +DEA + L Sbjct: 144 LCP--TLKIVKCDFAKYNYYSERVMSVLSIFDEDIEIYGVDEACLVFDDSKYKKAVMKLN 201 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL-------- 169 D G I + + + V I N++ K + Q + Sbjct: 202 DIGYNISVLNQEASKVRVSSKIVGFDQHYSSTNNSYKIFTPQNDSIYTPITDTKFSFRNI 261 Query: 170 ----ERQRKL------------------------------------------MSALPVDD 183 + R L + L D Sbjct: 262 RKLVDNIRTLVFISTGLTISSGISVTRGLSKYACGINKPNGSFVIDKNFDSHILDLETDK 321 Query: 184 VWGIGRRISK-KLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEF- 240 + GIG + L A IK + +L D ++ FI G + Sbjct: 322 INGIGLATKELLLKAYNIKYIKELRD-NLHFIYLTLPYKSFINLFNLSYGLSVFDFSDRS 380 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I + TD+ + + KL+S+ C I+ K S F+ Sbjct: 381 NKPVKSIGM-NTSFRPTTDFSDICTVLWCLCTSLCTKLKSKSLVCSTITLHYKFSSFSSR 439 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA--GHRYQKAGVMLGDFFSQGVAQL 358 S + P Q + S + ++ + GV S + Sbjct: 440 TKQSKTSK--LIDDPVQLFNICYDLLLASKVILDTKIVPNKIRLLGVSCSLLTSVNKKGM 497 Query: 359 NLFDDNAPRPG 369 F Sbjct: 498 YSFTSTVYNFK 508 >UniRef50_B4QLD4 GD13564 n=1 Tax=Drosophila simulans RepID=B4QLD4_DROSI Length = 940 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 54/465 (11%), Positives = 116/465 (24%), Gaps = 136/465 (29%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S RP+L G P+ V + G Sbjct: 275 VMHIDMDCFFVSVGLRARPELRGLPIAVTHSKGGNAATDVPVHPQADRKAELELFAQRFE 334 Query: 37 ------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+ G++ G + L Sbjct: 335 HHFHDGDKAEKVRSGFDKKMSLSEIASCSYEAREKGIRNGMFVGQALKL----------- 383 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTH 132 P ++ D + + TV Q T Sbjct: 384 -------------------CPELKTIPYD-----------FEGYKEVAFTLYDTVAQYT- 412 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 L + ++ + +D + G+G +S Sbjct: 413 --------------------------LNIEAFLLDSKNDILAYLAPMSLDLLPGVGSSMS 446 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSR 251 KL G+ D+ T + + + + + RG L + ++ + Sbjct: 447 HKLKQAGLNNCGDVQKTTLWRLERVLGKKLGQNLFQNCRGIDDRPLA-YEQARKTVSAEM 505 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALNEP 302 +FG R T+ Q +C + ++L + R ++ I TS + + Sbjct: 506 NFGIRFTNSAECEQFLCQLSDEVTKRLVEIKRKARSVNLKIMVRAAEAPVETSKYMGHGV 565 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN--- 359 + S + T D I + H + G+ L + Sbjct: 566 CDTINKSSLIKHATDDVNVITTVVLNLMREADIPPHELRGIGIHLTRLEDASAVRKENII 625 Query: 360 --LFDDNAPRPGSEQL-MTVMDTL--NAKEGRGTLYFAGQGIQQQ 399 +F + + + + + + G + + Sbjct: 626 KQMFGKMSEMKKDKPIPQEAVGGIAVSGAVGDDKVKKPSMFENKP 670 >UniRef50_A3VTP3 ImpB/MucB/SamB family protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTP3_9PROT Length = 453 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 87/413 (21%), Positives = 153/413 (37%), Gaps = 27/413 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D NAF+A+ P L G+PVV+ + IA + EA+ G++ G + + Sbjct: 13 YLYIDFNAFFAAAAQHDEPALAGRPVVITPHRSEYSSAIAVSYEARPFGIRRGTKIREAR 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L V + ++ Y + ++ +E + P ++YSIDEA L + D Sbjct: 73 HLCP--AVAVRPARHDRYIRLHKELIGAIETVLPLGKVYSIDEATFRLDRTQASPDRARI 130 Query: 120 -GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +++ + R +GIAQT LAKLA K + + +E + Sbjct: 131 QAEAVKSVIADRIGPSFRNSIGIAQTPLLAKLAAGLQKPDG------LTVLMMEDLPGRL 184 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCL 235 S+L + D+ GIG ++++L+ G+ + L + R + V ER G Sbjct: 185 SSLALSDLPGIGPNMAQRLERSGVTNIDALWALAPKQARAIWRSVQGERFWYAFHGY--- 241 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ E A K + SR + R + +AA +LR+ + ++ +K Sbjct: 242 EVPEPATKKGMVGHSRVLTSGLRTAKGARPVARALLLKAAARLRAMDRLATRLTLTLKDE 301 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF---S 352 S T + + A + + + G R + L Sbjct: 302 QGRKIAFEERFDLSTDSTTFLRALDRLWERALEQVPEL-RRGARLGSVSIFLHGLVGEGD 360 Query: 353 QGVAQLNLF------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 Q +LF D P +L +D LNA E +A Q Sbjct: 361 AEARQGSLFDGPIEADPEEADPKRARLWAAIDRLNADEEGRLARWALPDRQPD 413 >UniRef50_C4Q962 Rab geranylgeranyl transferase alpha subunit, putative n=1 Tax=Schistosoma mansoni RepID=C4Q962_SCHMA Length = 1262 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 69/411 (16%), Positives = 112/411 (27%), Gaps = 119/411 (28%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFYA+ E RP+L PV V SN+ + N A+ GV+ G P F K Sbjct: 712 LIVHVDMDAFYAAVEIRDRPELRHHPVAVGSNS--MLSTSNYIARRFGVRAGLPGFLGKK 769 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELS------------PRV--EIYSIDEAFCD 106 L + ++ ++ Y S V S L E + + S+DEA+ D Sbjct: 770 LCPQLKII--PCDFVKYTAASRVVRSILMEYTVSAGNTQNPCESDNIPFSAVSLDEAYLD 827 Query: 107 LTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL 166 +T V Sbjct: 828 ITDHL---------------------------------------------------VDRC 836 Query: 167 SNLERQRKLMSALPVDD---VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 +R V GIG ++LDA GIKT DL D + Sbjct: 837 DFPIERRTFWPRSAPGAPMLVPGIGHVTERRLDAFGIKTCADLIDKRGLLWHVSTKTSMI 896 Query: 224 RTVRELRGEPCLQLEEFAPTK-------------------------------QEIICSRS 252 +R G + + + R+ Sbjct: 897 YYMRIALGHSDDRWLTNIKNNFDEKSNKSFGFIDNDSENSVPSIQGQVELNRKSMSVERT 956 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 F +D + A + L+ EH + I+ +K F + + S L Sbjct: 957 FS-DTSDENELMHRCEQLAQMLSTDLKEEHVKGQLITLKMKLDTFEIR------TRSQLL 1009 Query: 313 LTPTQDSRDIINAATRSLDAIW---------QAGHRYQKAGVMLGDFFSQG 354 T + I + L + G+ + + Sbjct: 1010 PDYTNHTEIINSFGRELLREEMVAFKSNPAVNKPLTLRLMGLRMSNLLPVE 1060 >UniRef50_C4ZE13 DNA-directed DNA polymerase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZE13_EUBR3 Length = 341 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 53/217 (24%), Positives = 87/217 (40%), Gaps = 13/217 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D+N YAS E + P+L GKP+ V + G V+ + AK GVK G ++ Sbjct: 11 VILHSDINCCYASIEHLHHPELAGKPLAVGGDPEARHGIVLTADYIAKKYGVKTGMALWQ 70 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDL 116 K++ + S +LY S E + R E Y IDE + D+TG + D Sbjct: 71 AKEVCPD--ITFVSPRMDLYLRFSRMAHEIYAEYTDRQEPYGIDECWLDVTGSSSLKGDG 128 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR-KL 175 +EI + +TV VG++ K AKL + + G + L + K Sbjct: 129 LLIAQEISRRMKSELGITVSVGVSFNKIFAKLGSD------YKNGCYLILIQNRCMKQKF 182 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR 212 + + + + I K + ++ D D Sbjct: 183 LDLPEPYKEYDLKKAILKNMKKFLLEFGRDFIFIDEE 219 >UniRef50_Q1RLS3 Zgc:136881 n=6 Tax=Clupeocephala RepID=Q1RLS3_DANRE Length = 743 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 76/431 (17%), Positives = 134/431 (31%), Gaps = 82/431 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E +P+L KP VV G +IA + EA+A GV Sbjct: 8 VVALVDMDCFYVQVEQRLKPELKNKPCVVAQYKTWKGGGIIAVSYEARAHGVGRNMFADD 67 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + L V ++ Y + S V+ + + +E SIDEA+ DLT Sbjct: 68 ARKLCPDLQVARVPEAHGKADLTHYREASVEVIEVMSRFA-VIERASIDEAYMDLTASVQ 126 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ-RQTGGVVDLSNLER 171 R ++I A L+ TH+ + L + A AA Q S+ Sbjct: 127 ERLKNTSVQDITAQQLKNTHIQGFPTQQENTHLDRDAQRAAGLQQWLDLLSSSTESSPAD 186 Query: 172 QRKLMSALPVDDVW-------------GIGR-----RISKKLDAMGIKTVLDLADTD--- 210 + AL V+ + GI +++ L+ +TVL L+ Sbjct: 187 LHLAVGALIVEQMRAAVEEHTGFRCSAGISHNKVLAKLACGLNKPNRQTVLPLSSVPQLF 246 Query: 211 -----------------------------------IRFIRKHF-NVVLERTVRELRGEPC 234 + +HF + RG Sbjct: 247 STLPISKIRNLGGKLGSSITETLSVENMGDLTRFSRAQLEQHFGDKTGPWLYDLCRGIEF 306 Query: 235 LQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSE----HQYCRFI 288 ++ + I CS++F + ++ + A E+L + + R + Sbjct: 307 EPVKPRQLP-KSIGCSKNFAGKTCLRTKQQVQYWLHQLALELEERLNKDRDVNGRVARQL 365 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTP-----TQDSRDIINAATRSLDAIWQAGHRYQKA 343 + ++ + + S L+ T DS II + + Sbjct: 366 TVGVRQA---GGQRSGSFSRCCALVRYDAMKMTNDSLTIIKSLNTAGAHQEAWSPALTLL 422 Query: 344 GVMLGDFFSQG 354 + F Sbjct: 423 HLSASKFSDAP 433 >UniRef50_UPI000192707B PREDICTED: similar to predicted protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI000192707B Length = 850 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 96/258 (37%), Gaps = 18/258 (6%) Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 D+ D +IR + + T T GIA+ LAKLA AK + Sbjct: 1 DVYDLAEKIRKDIFEETKCTASCGIAENILLAKLATKQAKPNGVCYIQKC------DVPE 54 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEP 233 +++ V ++ GIG S+KL ++ I T DL + F++K F + E RGE Sbjct: 55 FIASQKVCNLPGIGAIYSEKLSSLSILTCADLQKFSLFFLKKEFGQKLGEMLYNFCRGED 114 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 L+ + ++ + ++G R + + + I + + +L + + I+ + Sbjct: 115 SRTLKLY-EERKSVSAEINYGMRFSSMKEVEEFIDQLSKQVEVRLTEAEKKGKLITLKMM 173 Query: 294 --------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 + + S S+ + +PT S I + L + G+ Sbjct: 174 IRQKGEGNPLKYMGHGLCDNVSKSIMISSPTNSSELISRYCLQLLHLFTVIAQDIRGIGI 233 Query: 346 MLGDFFSQ--GVAQLNLF 361 + ++LF Sbjct: 234 QVTKLSDNIIQNKAVDLF 251 >UniRef50_Q4SL60 Chromosome 17 SCAF14563, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SL60_TETNG Length = 671 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 71/417 (17%), Positives = 126/417 (30%), Gaps = 81/417 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E P L P VV G +IA + EA+A GV Sbjct: 8 VVALVDMDCFYVQVEQRINPALKNTPCVVAQYKTWKGGGIIAVSYEARAHGVTRNMWVDD 67 Query: 58 QKDLFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K L V ++ LY + S V+ + + +E SIDEA+ DLT Sbjct: 68 AKKLCPDLQVARVRESHGKADLTLYREASVEVIEVMSRFA-VIERASIDEAYMDLTAAVQ 126 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 R +I+A +L+ T++ G A + +R Sbjct: 127 QRLKDLNNWQIQAHLLKATYVQ---GFPPNPPERPAATEDVAHDR----------EEQRA 173 Query: 173 RKLMSALPVDDVWGIGRRISKKLD-----------------------AMGIKTVLDLADT 209 R L L + + G + S +L + GI LA Sbjct: 174 RGLQQWLAMLPLPAAGEQSSAELQLAVGALIVEEMRAAVEKDTGFRCSAGISHNKVLAKL 233 Query: 210 ----------------DIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 + + + ++ RG ++ + I CS++ Sbjct: 234 ACGLNKPNRQTLLPLGSVGELFSSLPIGKIQWLYDLCRGVDFEAVKPRQLP-KSIGCSKN 292 Query: 253 FGERIT--DYPSMRQAICSYAARAAEKLRSE----HQYCRFISTFIKTSPFALNEPYYGN 306 F + + ++ + A E+L + + + ++ ++ ++ Sbjct: 293 FPGKTSLATKEQVQYWLNQLALELEERLTKDREANGRVAKMLTVGVRQ---LGDKRPSSF 349 Query: 307 SASVKLLTP------TQDSRDIINAATRS-LDAIWQAGHRYQKAGVMLGDFFSQGVA 356 S L+ T I + T A W + F A Sbjct: 350 SRCCALVRYEATKLATDSFAIIRSLNTAGPHQATWTP--PLTMLHLSATKFSDAPSA 404 >UniRef50_UPI0001926C03 PREDICTED: similar to polymerase (DNA directed), eta, partial n=2 Tax=Hydra magnipapillata RepID=UPI0001926C03 Length = 501 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 56/397 (14%), Positives = 110/397 (27%), Gaps = 101/397 (25%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY P+L GKP V+ N G +IA EA+ GV + Sbjct: 9 VVLLVDMDCFYVQVVQRKNPELVGKPCAVVQYNAWKGGGIIAVGYEARKFGVTRQMRGDE 68 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K+ +V ++ + + V+ L + +E S+DEA+ DLT + N Sbjct: 69 AKEKCPDIHLVPVPENRGKADLTQFREAGAEVIEILAGFADCLERASVDEAYMDLTELIN 128 Query: 113 C----RDLTDFG---------------------------REIRATVLQ------------ 129 D+ + ++ + Sbjct: 129 RDFCNYDIEEVALHTFQNTNIVGIDNMVTGLTNTQDILKCDLYKQWHEVLHRSEENLKLA 188 Query: 130 ---------------RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + T GI Q K LAK+ K Q+ L + + Sbjct: 189 IGATIADKMRKEVKEKLGFTCSAGIGQNKMLAKIVAGFHKPDQQ------TLVLPDNVAE 242 Query: 175 LMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHF--------------- 218 + + + + +G ++ K+L + ++ + DL + KH Sbjct: 243 MFQSTKMRKIRSLGGKLGKQLAETFNVEYMSDLLKISSNDLEKHSVGKPAYNTCSNTILL 302 Query: 219 -----NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAIC--SYA 271 + + +R+ + + S T + Sbjct: 303 KECMGAINEDMFIRQALKRFSIPRSTIHNKIKSKHKCISAPTIFTYDEEQLFSSRIKVMC 362 Query: 272 ARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 + H I + +P + Sbjct: 363 DK------EFHLATFRIMMKLCDNPGNKKVVMKRGTK 393 >UniRef50_A7I053 DNA-directed DNA polymerase n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I053_CAMHC Length = 299 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 62/310 (20%), Positives = 122/310 (39%), Gaps = 20/310 (6%) Query: 83 RVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 ++ L +P +E YSIDE F DL+G+ F ++ +L+ +L V +GI+ Sbjct: 6 KLYKFLYTFTPDIEQYSIDEFFLDLSGINVKNGHLKFAEFLQNEILKIFNLPVSIGISDA 65 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 K +AKLA AK + + + N + + + + G+G+ + K+L+ +GI T Sbjct: 66 KYIAKLATDLAKPFGIK------MINSDELDSTLKNVDIVKFPGVGKSMLKRLNKLGIFT 119 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 + D+ ++FI + F + + G L+ ++ SR+F + + D Sbjct: 120 LGDVKK--VKFIFEKFGKNGIKLYENITGTGDNLLQ-INKKRKSFSHSRTF-KAVFDRNE 175 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 +++ I + Q I+ S S + + +I Sbjct: 176 IKRRILILCRYICFDVYKFGQNPTNYELKIRYSD----RITLSGSITYRNKFYENVLHEI 231 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 +N D V +G+F ++ NLF + + ++ + + Sbjct: 232 MNDLFIKCDKF--ETKSIIYISVCVGEFTNRAEQ--NLFSEMK--QNNTEIDKAVHKIRE 285 Query: 383 KEGRGTLYFA 392 K G +L FA Sbjct: 286 KYGIDSLLFA 295 >UniRef50_Q9Y253 DNA polymerase eta n=14 Tax=Amniota RepID=POLH_HUMAN Length = 713 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 71/391 (18%), Positives = 123/391 (31%), Gaps = 84/391 (21%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL---SNNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ F+ E P L KP V+ S G +IA + EA+A GV Sbjct: 8 VVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADD 67 Query: 58 QKDLFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K L + +N Y + S VM + + +E SIDEA+ DLT Sbjct: 68 AKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDLTSAVQ 126 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 R G+ I A +L T++ G+ Q T A+ +K + G+ + + Sbjct: 127 ERLQKLQGQPISADLLPSTYIE---GLPQGPTTAE---ETVQKEGMRKQGLFQWLDSLQI 180 Query: 173 RKLMSA---LPVDDV-------------------------------WGIGRRISKKLDAM 198 L S L V V G+ + + L + Sbjct: 181 DNLTSPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSH 240 Query: 199 G-------------IKTVL-----------------DLADTDIRFIRKHF-NVVLERTVR 227 G I+++ +L ++ HF Sbjct: 241 GSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYA 300 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 RG ++ + I CS++F + ++ + A E+L + Sbjct: 301 MCRGIEHDPVKPRQLP-KTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDN 359 Query: 286 RFISTFIKTS-PFALNEPYYGNSASVKLLTP 315 ++T + S ++ L Sbjct: 360 DRVATQLVVSIRVQGDKRLSSLRRCCALTRY 390 >UniRef50_A4I3M2 DNA polymerase kappa, putative n=2 Tax=Leishmania RepID=A4I3M2_LEIIN Length = 409 Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats. Identities = 57/395 (14%), Positives = 103/395 (26%), Gaps = 73/395 (18%) Query: 10 FYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 FYA+ E P L +P V S D + + G P F K L + Sbjct: 2 FYAAVEERLDPSLRERPFAVGSYATADHNQLHCS----------GTPGFMAKKLCP--SL 49 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR---DLTDFGREIR 124 +++ + + V + P +DE D+T D E R Sbjct: 50 WTRPPHFDRHRREAANVRAIGALYDPHYVAVGLDELTMDVTDYLRTHQDCSAEDVCAEFR 109 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 V T T GIA T AK+A++ K + ++ L E + +PV DV Sbjct: 110 RRVEAATQPTCSGGIAHTPAFAKVASNVNKPNGQH---ILTLRTREEVLAHVRDMPVRDV 166 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC---------- 234 GIG ++L A+G+ T D + G Sbjct: 167 PGIGFATEQRLHALGVVTCKDFLTHKAELCYLFREKTFAFYLSVGLGLVRANVNRSNAER 226 Query: 235 -------------------------------------LQLEEFAPTKQEIICSRSFGERI 257 + ++ + + Sbjct: 227 EAVTAPPSAAAAMKPSSAAHLKSRLSRALASPSPSALRAVVPDHRAQKSTRKCTTLACGV 286 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + + A + L + + + + + + S + L T Sbjct: 287 PICEAFWYHLRQLTQGAHDVLMKQGAGTKHVCF------YTTSRAFVSRSHAAMLSEATN 340 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + + + ++ GV Sbjct: 341 SFAKLYAGLEKVAEPFAARHREFRLIGVKFSKLQP 375 >UniRef50_C8VB00 DNA polymerase eta (Eurofung) n=19 Tax=Eurotiomycetidae RepID=C8VB00_EMENI Length = 674 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 71/471 (15%), Positives = 129/471 (27%), Gaps = 126/471 (26%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CE V +P+ V +IA N A+ G+ + K Sbjct: 44 VIAHIDLDAFYAQCEMVRLGTPRERPLAV--QQWDSLIAINYPARKFGITRMISAKEAKA 101 Query: 61 LFRRCGVVCF------------------------SSNYELYADMSNRVMSTLEELS---- 92 + + Y S +++ T++ Sbjct: 102 KCADIVLQHVATFREGEGGKWAYREDAWKNIGTDKVCLDPYRAESRKILGTIKRELSKCY 161 Query: 93 --------------------PRVEIYSIDEAFCDLTGV---------------------- 110 VE S+DE F DL+ + Sbjct: 162 SELNGDLSGLGLSSQIKLQEALVEKASVDEVFIDLSPLVFGVLLQRYPEMREKPHGDDRV 221 Query: 111 ----------------------------RNCRDLTDFGREIRATV--------LQRTHLT 134 + D D I A + T Sbjct: 222 ALLPCPPTTALEWDTEDCLVDLDENETEVDDPDWDDVAMLIGAEIVRSVRTAVWNSLSYT 281 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 GIA+ K +AKL + K ++ + + +S + +G ++ + Sbjct: 282 CSAGIAKNKMMAKLGSATNKPNKQ------TVVRNRAIQNFLSGFKFTKIRMLGGKLGDQ 335 Query: 195 LDAM-GIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 + AM G + + +L + R N +RGE ++ + ++ ++S Sbjct: 336 VTAMFGTEQISELLKVSLEQFRAKLNDDTAVWLYGIIRGEDKSEVNPRT-QIKSMLSAKS 394 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 F I + + +AA +L E + + AL+ S +L Sbjct: 395 FRPSINTLDQADKWLHIFAADIYGRLVEEGV----LEHKRRPKTIALHHRQGAQVKSRQL 450 Query: 313 LTP---TQDSRDIINAATRSLDAIWQAG--HRYQKAGVMLGDFFSQGVAQL 358 P T D + L I G + +G F Sbjct: 451 PIPGSATIDEDLLFELGKTLLRQIAADGAAWPCANISMSVGGFEDGTSKNQ 501 >UniRef50_B6HVX2 Pc22g06410 protein n=8 Tax=Trichocomaceae RepID=B6HVX2_PENCW Length = 572 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 113/360 (31%), Gaps = 87/360 (24%) Query: 4 LC-DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D + FYAS V +P+L P+ V V+ N EA+ G+ K + Sbjct: 32 HIQDYDCFYASVFEVEQPELRSLPLAV--QQKQIVVTCNYEARRRGLHKLQLIKDAKRIC 89 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDL-------TGVRNC 113 V+ + + + S + + RVE DE F D+ TGV+N Sbjct: 90 PDV-VIVLGEDLTKFRNASRELYQLVRSFVWGGRVEKLGFDELFLDVTEMIDYNTGVQNQ 148 Query: 114 RDLTD---------------------------------FGRE------------------ 122 DL + R+ Sbjct: 149 NDLENSYFHLDRNDPTVGFSYDATRFQGSTFPAMEAACIARKNSSSSEMRLLVASHLQGH 208 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ---TGGVVDLSNLERQRKLMSAL 179 IR+ + T GI+ +K LAKL + K + +N + + Sbjct: 209 IRSKLEHEIGFTATGGISTSKLLAKLVGNVHKPNGQTTLLPPYTATENNTSNVFQFLDDH 268 Query: 180 PVDDVWGIGRRISKKLDAMGIK---------TVLDLADTD---IRFIRKHF------NVV 221 + + GIG RI++KL + I TV D+ + + + Sbjct: 269 EIRKIPGIGSRIAQKLKSH-ITGQENVDEKITVKDVRQFPGMGPPLLDRILGGPGSVKGI 327 Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 R L G ++ E +I S+G + +R+ + + ++R++ Sbjct: 328 GMRIWSILHGVDNSEVLEGRDVPTQISIEDSYGR-LDTLEGVRRELVVLSRSLIRRVRTD 386 >UniRef50_C0WP28 Possible DNA-directed DNA polymerase n=3 Tax=Lactobacillus RepID=C0WP28_LACBU Length = 327 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 13/240 (5%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNN----DGCVIARNAEAKALGVKMGDPW 55 +F L D +FYASCE V R + P+VVLS G ++A + EAK L + Sbjct: 11 VFFLIDNKSFYASCEAVQRGFNPLKIPLVVLSEQENTNGGLILATSPEAKRL-FHLKANV 69 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNC 113 +Q++L + + LY + ++ E + V YSIDE+ D+T Sbjct: 70 SRQRNLPQDPRLCVVPPRMNLYIKRNLQINQIFTEFASEQDVWPYSIDESIVDMTHSWKL 129 Query: 114 RD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + R I+ TV +R L VGI AK+A K + G ++ Sbjct: 130 FGDTPREVARVIQKTVRKRLGLYTTVGIGDNPVQAKIALDVYAKHTPELIG--EIHYETV 187 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + + DVWGIG+R +K L+ +GI + LA T+ ++K + V+L G Sbjct: 188 PKTIWPINNLTDVWGIGKRTAKHLNRLGIHNMYQLAHTNPYLLKKKW-VLLVNNYLRRHG 246 >UniRef50_A9SDY0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SDY0_PHYPA Length = 680 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 53/359 (14%), Positives = 121/359 (33%), Gaps = 52/359 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA+ E V +P+ V +IA N A+A+G+ + + Sbjct: 9 VVLHADLDCFYAAVEQVRLGIPTEQPLAV--QQWDGLIAVNYAARAVGIVRHERVSEALR 66 Query: 61 LFRRCGVVCF--------------------SSNYELYADMSNRVMSTLEELSPRVEIYSI 100 +V ++ E Y S +V + S E SI Sbjct: 67 KCPDLHLVHVETIGGDKPGTPESLGPRGNAKASLERYRQASAKVFNIFRRYSKLCERASI 126 Query: 101 DEAFCDLTG-----VRNCRDLTDFGREIRATVLQRT---HLTVGVGIAQTKTL------- 145 DEA+ D++ + D + T + V + + + Sbjct: 127 DEAYLDVSEQVEEMLEKDMDWESELHRLLEPTGSETTSKGVPVMLIEGGSLAIYNAYDRR 186 Query: 146 ----AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGI 200 + +A+ + + G + + LM ALP+ + +G ++ +++ G Sbjct: 187 LLAGSIIADRMRASVRNELGYTISVIPPRAVPGLMKALPLKKIKLLGGKLGEEMTKKWGC 246 Query: 201 KTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 T + + F + ++G Q++ + ++ S+SFG I + Sbjct: 247 TTAGEAQQIPHAALVACFGDRLGTYAWKAVQGLKAEQVQ-VKDLVKSMLASKSFG-AINE 304 Query: 260 YPSMRQAICSYAARAAEKLRSE----HQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 +R+ + + A ++ + + + + ++ F + + S S + Sbjct: 305 LAGIRRWLSVLSHDLAIRMSRDFEMNQRQPKVFQLYYRSGKFKNSADH---SRSAPMPR 360 >UniRef50_B2ABI5 Predicted CDS Pa_1_20790 n=4 Tax=Sordariomycetes RepID=B2ABI5_PODAN Length = 696 Score = 151 bits (380), Expect = 6e-35, Method: Composition-based stats. Identities = 70/446 (15%), Positives = 128/446 (28%), Gaps = 104/446 (23%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++ FYA E V KP+ V +IA N A+A + + + Sbjct: 45 VVAHLDLDCFYAQVEMVRLGIPEDKPLAVQQWERQGLIAVNYPARAFKIGRHCTVTEARR 104 Query: 61 LFRRCGVVCF-----------------------SSNYELYADMSNRVMSTLEELSP---- 93 L + + Y S R+M ++E P Sbjct: 105 LCPELIAQHVATWREGDDKWAYREDAAEHIATDKVSLDPYRLESRRIMRVIKEHLPGGGL 164 Query: 94 -RVEIYSIDEAFCDLTGVRNCRDLTDFGREI-----RATVLQRTHLTVGVGIAQTKTLAK 147 +VE SIDE F DLT + L +G E+ V + + V + A Sbjct: 165 QKVEKASIDEVFLDLTAHVHQVMLERYGEELGGPPPYGDVSEELPMPVVTAL---DWKAD 221 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI-----------GRRISKKLD 196 + G D + + L+++ V +V G+ G +K L Sbjct: 222 ALVDLG--EGDRQEGEFDDPDWDDVALLVASEIVRNVRGVIREKLGYSCSAGVSRNKLLS 279 Query: 197 AMG----------------------------IKTVL-----------------DLADTDI 211 +G I+ + DL I Sbjct: 280 KLGSAHKKPDQQTVIRNRAVGHFLSGFKFTKIRNLGGKLGEQVADAFKTEAVSDLLTVPI 339 Query: 212 RFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 +++ + LRG ++ + ++ ++SF IT + + + Sbjct: 340 EQLKQKLGDENGVWIYETLRGIDTSEVNS-GTQIKSMLSAKSFRPDITTVEQATKWLRIF 398 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ--DSRDIINAATR 328 AA +L E + + L+ + + S P + + + A Sbjct: 399 AADIFARLVEEGV----LEHKRRPKTINLHHRHGNQTRSRSGPIPARLLNEESLFELAKN 454 Query: 329 SLDAIWQAG--HRYQKAGVMLGDFFS 352 I G + + F Sbjct: 455 LFHQITLEGNAWPCSNLSLSVAGFEE 480 >UniRef50_B4VAW5 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4VAW5_9ACTO Length = 352 Score = 150 bits (379), Expect = 7e-35, Method: Composition-based stats. Identities = 60/336 (17%), Positives = 114/336 (33%), Gaps = 19/336 (5%) Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDFGRE 122 N + ++++ E ++PRV+ D A D+TG RD Sbjct: 8 HAHWHLPHNDDTDLYA--QLLAIAEGITPRVQAIEPDAAHLDITGALRYWQRDPEGVAAL 65 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +R + + +A + L A G+ + + + PV Sbjct: 66 LRLRTMALHGVQTTCAVAPNRML------ATMAAAATPPGMTTVIYTGDVERWLRPRPVA 119 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFA 241 ++GIG + KL G+ T+ D+A+T + + + F G+ ++ Sbjct: 120 ALYGIGPATAAKLRTYGLHTIGDVAETPLPTLVRLFGASAGRSLQAHAHGQDPRTVQTQ- 178 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 P + + R+F D R+ + A A +LR Q ++ ++ + Sbjct: 179 PIAKSLAADRAFEHDALDPAEHRRTLLDLAEEVAARLRDGQQAAGGLALSVRYAD----- 233 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 ++ L T +R I A D + R + G+ D A L Sbjct: 234 -RSTSTRRRTLAEATAHTRPIATTAYELYDLLALQRARVRAIGLRAHDLRPSSEATQQL- 291 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 +A + + V D A+ G GT+ A + Sbjct: 292 TLDAGDDRALAIEAVTDRARARYGTGTIRPAALAKR 327 >UniRef50_C6VUA5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VUA5_DYAFD Length = 503 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 57/407 (14%), Positives = 115/407 (28%), Gaps = 27/407 (6%) Query: 16 TVFRPDLWGK--PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 RP+L+G + V V A +AEAKALG++ G + + ++ Sbjct: 19 IRVRPELYGLEFALAVPERGRMVVTASSAEAKALGIEAGMVVADARAILP--SLIVLDDE 76 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 E+ + +P V + + D D+TG + L + Sbjct: 77 AEVARQALRSLAEWCLRYTPTVALDTPDGLILDITGCAHLWGGEKAYVHDLIAKLHQAGY 136 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 T +A T A H G + + LP + + + Sbjct: 137 TARAALAGTVGAAWAHAHF--------GVSGTIVAPGEPHNGLLKLPPAALR-LPPETVE 187 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 K+ +G + R +R+ F L + + G +E T Sbjct: 188 KMQKLGFYYIGGFVRIPARMLRRRFGEDLMEKLNKALGYAHEFIEPIRQTTP-YQERLPC 246 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 E I + A+ +L E + R + + Sbjct: 247 LEPIVTATGIEIALQKLLETLCGRLAKEGKGLRKSVLRCYRVDGQVQRIDIVTNR----- 301 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 + + + + I G + + + V Q ++D S + Sbjct: 302 -ASHHVKHLFRLFELKIKTIA-PGFGIELFLLEAPEVEDMSVTQETMWDTTGGFE-SAAI 358 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 ++D + + G ++ + W + L T + + Sbjct: 359 TELLDAVTGRTGTDAVHR-YLPDEHHWPERSVKLV----TSLREQPK 400 >UniRef50_O42917 N-acetyltransferase eso1 n=1 Tax=Schizosaccharomyces pombe RepID=ESO1_SCHPO Length = 872 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 56/438 (12%), Positives = 122/438 (27%), Gaps = 98/438 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D +AFYA E+V P+ V +IA N A+A + + + K Sbjct: 28 VVAHIDQDAFYAQVESVRLGLDHSVPLAV--QQWQGLIAVNYAARAANISRHETVTEAKK 85 Query: 61 LFRRCGVVCFS----------------SNY-----ELYADMSNRVMSTLEELSPRV---- 95 NY + Y S ++++ +++ +P V Sbjct: 86 KCPELCTAHVKTWKAGESEAKYHENPNPNYYKTCLDPYRHESVKILNIIKKHAPVVKKAS 145 Query: 96 -----------------EIYS----------------------------IDEAFCDLT-- 108 E Y I+E D T Sbjct: 146 IDECFIELTSDVKRIVLEEYPYLKIPSEDSNVALPQAPVLLWPAEFGMVIEEEVVDRTKE 205 Query: 109 ------GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 +EIR + + T G++ L+KL + K ++ Sbjct: 206 DYERDWDDVFLFYAAKIVKEIRDDIYLQLKYTCSAGVSFNPMLSKLVSSRNKPNKQ---- 261 Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRI-SKKLDAMGIKTVLDLADTDIRFIRKHF-NV 220 + + + +L + D+ +G + + ++ +G ++ D+ + + F+ Sbjct: 262 --TILTKNAIQDYLVSLKITDIRMLGGKFGEEIINLLGTDSIKDVWNMSMDFLIDKLGQT 319 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK-LR 279 G ++ K + +++ +A+ + L Sbjct: 320 NGPLVWNLCHGIDNTEITTQVQIKSMLSAKNFSQQKVKSEEDAINWFQVFASDLRSRFLE 379 Query: 280 SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ-DSRDIINAATRSLDAIWQA-- 336 E S F S S ++ ++ I+ A ++ L + Q Sbjct: 380 LEGMRRPKTICLTVVSRFL------RKSRSSQIPMNVDISTQFIVEATSKLLRQLQQEFD 433 Query: 337 GHRYQKAGVMLGDFFSQG 354 + + + Sbjct: 434 VYPISNLSISFQNIIEVD 451 >UniRef50_B7FW32 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FW32_PHATR Length = 592 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 75/445 (16%), Positives = 140/445 (31%), Gaps = 82/445 (18%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + L D++ FYA CE V D P+ +L V+A A+ G+K GD W Sbjct: 37 VVLLLDLDCFYAQCECVRLGWDAMEIPLALL--QWDSVLAVTYPARKYGIKRGDSWDTVH 94 Query: 60 DL----FRRCGVVCFSSNYELYADMS-----NRVMSTLEELSPRV--EIYSIDEAFCDLT 108 V ++N ++ + + V E SIDE F D+T Sbjct: 95 QKSQGACYAVHVPILTTNGSRTDRVATLPPGEVLAWVENQFGDNVVLERASIDEFFLDVT 154 Query: 109 GVRNCRD---------------------------------------------LTDFGREI 123 V R I Sbjct: 155 NVCYLESTLDVCDLGSNNSLEGALQETAVVGQSEIMTLVRNGMDVDVEALQRGAHLARCI 214 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 R V T+ GI KT+AKL+ K + ++ + L++ + Sbjct: 215 RDEVRTLLGFTLSAGIGSNKTIAKLSAAYGKPNGQA------ITYPQFVDTLLADTEIRK 268 Query: 184 VWGIGRRISKKLDAM----GIKTVLDLA-DTDIRFIRKHFN-VVLERTVRELRGEPCLQL 237 +G ++ K + A+ TV +A + + +HF R RG + Sbjct: 269 CRNLGGKLGKTVQALLPADAPTTVHSIAKYLSLPTLEQHFEAPTAAWVYRVARGVDTEPV 328 Query: 238 EEFAPT--KQEIICSRSFGERI--TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + + I +S + D+ S+ I A ++ + Sbjct: 329 ASKNESALTKSITAFKSLPFDVQGHDWESLASWIRLLADEIVSRVERDASRNGRYP-KSC 387 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDS------RDIINAATRSLDAIWQAGHRYQKAGVML 347 T +A N + S+++ P + ++ +++ A +G R ++ G+ Sbjct: 388 TIQYAGNGTTGQRNKSIRVPFPAERLSKNKKIDELCGVVPKTVQAKENSGFRLRRIGLCA 447 Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQ 372 DF ++ + ++ F N + Sbjct: 448 IDFRNRPASGIDRFFCNTCTSSQPK 472 >UniRef50_B6K7S5 Sister chromatid cohesion protein Eso1 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K7S5_SCHJY Length = 884 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 57/458 (12%), Positives = 125/458 (27%), Gaps = 94/458 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AFYA ETV P+ V +IA N A+ G+ D K Sbjct: 28 VVVHVDQDAFYAQVETVRLKLDHSVPLAV--QQWDNLIAVNYAARPYGITRFDTAENAKK 85 Query: 61 LFRRCGVVCF---------------------SSNYELYADMSNRVMSTLEELSPRVEIYS 99 + ++Y + S +++ L + S V+ S Sbjct: 86 KCPELNLAHVQTWKVGEREPKYHEKPEWESHKVCLDMYRNESKKILGILSKYSKLVKKAS 145 Query: 100 IDEAFCDLTG-------------------------------------------------V 110 IDE+F DLT Sbjct: 146 IDESFVDLTAEIKKKLIQDYSFLGVPPEDLSLPLPTAPTVLWTEELGRVFGEEEGLLSEA 205 Query: 111 RNCRDLTDFGREIRATVLQR--------THLTVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 +N D + A +++ T GI++ L+K+ + K ++ Sbjct: 206 KNGGDWDEVFLHYGARIVKEIRNEIFNTLGYTCSAGISRNAMLSKILSSKNKPNKQ---- 261 Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHF-NV 220 + ++ + + ++ G + ++L + + + D+ + + + + Sbjct: 262 --TVLLNSMVDHYLADVRLSELRLFGGKYGEELGKKLNAEYIKDIRAIPMDELIRILGDR 319 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + G ++ T+ + ++ + +A+ + Sbjct: 320 DAQVVWNVCNGIDNSEITNVNNTQSMLSAKNFLRSKLKSSEEAMKWFRVFASDLMSRYMD 379 Query: 281 EHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA--TRSLDAIWQAGH 338 Q R + + L G S + + NAA L + + Sbjct: 380 VEQIKRPKTFVLNVVTGNL---RKGRSIPIAPSDAISEEFVYNNAAKLLAQLASAYDI-F 435 Query: 339 RYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 V +F + + + + V Sbjct: 436 PIVHLSVSFRNFEDRDTKLQGIESFMQSLTQPKNIEKV 473 >UniRef50_C0SPA8 DNA repair protein homolog yobH n=15 Tax=root RepID=YOBH_BACSU Length = 217 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 82/217 (37%), Gaps = 6/217 (2%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I++++ + L VGI L+KLA K + G+ + +L Sbjct: 1 MAKAIQSSMWREFGLMCTVGIGDNMLLSKLALDLESK--KTKSGIARWRYEDVPNRLWKV 58 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ +WGIG R+ + L+ MGI TV LA + + K F ++ + G ++ Sbjct: 59 RPLSKMWGIGGRMERNLNRMGISTVGQLAKFPLELLEKKFGIMGNQLYYHAHGIDLSEIG 118 Query: 239 EFAPTKQ-EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 Q S+ T ++ + A + R+ ++ R IS I S Sbjct: 119 APLMQGQISFGKSQILFRDYTKREEIKAVLLEICEEVARRARTYNKVGRTISLGIGYSK- 177 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 +E G S + PT + DI + + Sbjct: 178 --DELGGGFHRSKTIDFPTNITMDIYKCCLMFFNKFY 212 >UniRef50_A2QJ22 Contig An04c0170, complete genome n=2 Tax=Aspergillus RepID=A2QJ22_ASPNC Length = 615 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 63/387 (16%), Positives = 113/387 (29%), Gaps = 76/387 (19%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D + FYAS V +P L P+ V V+ N EA+ G++ + K + Sbjct: 62 DYDCFYASVFEVEQPVLKSLPLAV--QQKQIVVTCNYEARRRGLRKLQLIKEAKQICPDV 119 Query: 66 GVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEA-------------------- 103 V+ + + D S + + +VE DE Sbjct: 120 -VIVLGEDLSRFRDASKDLFHYIRSFVWGEKVERLGFDEVCIASIDSATDLGSLSEMPVE 178 Query: 104 -----FCDLTG-------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 F T + +R + Q+ T VGI+ +K LAKLA Sbjct: 179 MVLHGFLGCTDEDTSAWLYTRLLVASHLAGYLRGQLEQQKGYTATVGISTSKLLAKLAGS 238 Query: 152 AAKKWQRQTG----GVVDLSNLERQRKLMSALPVDDVWGIG----RRISKKLDAMGIK-- 201 K + T L+ + A + + GIG R++S L G Sbjct: 239 THKPNNQTTLLPPYTTPTLAAPSNVLDFLDAHEIRKIPGIGSKLTRKLSHYLADGGAHSA 298 Query: 202 --------------TVLDLADTD---IRFIRKHF------NVVLERTVRELRGEPCLQLE 238 TV D+ + + + R L G ++ Sbjct: 299 PAVTTDDTADSNKVTVRDIRLLPGMGPSLLSRILGGPGAPRDIGVRVWGLLHGVDNTEVV 358 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR-----SEHQYCRFISTFIK 293 + +I S+G + S+R+ + ++R + + + Sbjct: 359 QAGDLPTQISIEDSYGR-LDSLDSVRKELVLLTGSLLRRMRTDLTEKDRETDSIAANQSA 417 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSR 320 S S + + T ++ Sbjct: 418 MSKVRWLAHPRTLRLSTRPRSATDSAQ 444 >UniRef50_C3RLA4 DNA polymerase IV n=4 Tax=Bacteria RepID=C3RLA4_9MOLU Length = 250 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 100/260 (38%), Gaps = 17/260 (6%) Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 +A+ K + + +++M L + D++GIG++ KL A+GI T+ D+A Sbjct: 1 MASDMKKPMG------ITILTRSNLKEIMWPLDIKDMFGIGKKTQPKLKAVGINTIGDIA 54 Query: 208 DTDIR-FIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + D +R+ R+ G ++ + + S + D +R Sbjct: 55 NYDNYNKLRQIIGKNALLLYRKANGIDNSAVDAKQNELKSVGNSTTLPYDTNDEEILRDT 114 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + S A + + + + IS IK + F + + + D I++ A Sbjct: 115 LKSLARQVSARANKRNLISNSISITIKYTRFE------SVTRQTTVNSFINDYETILSTA 168 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFF--SQGVAQLNLFDDNAPRP-GSEQLMTVMDTLNAK 383 DA + +G + G+ L + QLN+F+ + L +++ +N K Sbjct: 169 KMLFDANY-SGRPVRLLGISLNNTINKKNYKEQLNIFEMAQEDETNDDSLEQLLNAINNK 227 Query: 384 EGRGTLYFAGQGIQQQWQMK 403 + + A ++ Q K Sbjct: 228 FDKKLVTKASSFAKKTPQKK 247 >UniRef50_A4RZL9 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZL9_OSTLU Length = 429 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 97/273 (35%), Gaps = 29/273 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AF+A+ E P L PV V G +I + A+ LG K + L Sbjct: 30 VAHVDADAFFAAVEKQRNPRLRDVPVAV--RQHGDIICVDHRARELGATKHMNPDKCRAL 87 Query: 62 FRRCGVVCFSSN--------YELYADMSNRVMSTLEELSPRV---------EIYSIDEAF 104 G + YE Y S + + L R+ + S+DEA+ Sbjct: 88 LTPHGGEVVHVHSTDDHMLSYEPYTRASYELHAKLYAACERLRVDGGTLIYQRASVDEAY 147 Query: 105 CDL-TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV 163 L G + + F IR + + +V VG+A+ K LAK+A+ AK GV Sbjct: 148 VQLENGAKPSQRGKAFAESIRRAIAEECGYSVSVGVARNKMLAKIASKLAKPN-----GV 202 Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRI-SKKLDAMGIKTVLDLADTDIRFIRK---HFN 219 V + + + LP + + + L ++T D+ + + + + Sbjct: 203 VVIEDEADLERCFRQLPSSHLPKCNEPLIRRNLALHNLRTAWDVRELNAKRLEALVGLTR 262 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 + G ++ K + S + Sbjct: 263 ERALALCKAAHGVDDSEVVHKVHEKNTLSSSMT 295 >UniRef50_A7HW56 Nucleotidyltransferase/DNA polymerase n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HW56_PARL1 Length = 548 Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 114/376 (30%), Gaps = 29/376 (7%) Query: 25 KPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRV 84 + + + V ARN A A G++ G L + S++ E R+ Sbjct: 53 RALAMPGVGGLRVTARNELADAAGIRPGQMVSDATALCPGLEL--HSADREGDRKGLVRL 110 Query: 85 MSTLEELSPRVEIYS------IDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVG 138 +P + D D+TG + E LQ LT Sbjct: 111 AGWCGRYTPWTALDPQGIGDEPDGILLDITGCDHLFGGEAKLLEELRRRLQGFGLTTRAA 170 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 IA T+ A + + + + +LPV + + I L + Sbjct: 171 IASTRGAAWALAR-------FGNQPALVLPVNGEVDALRSLPVAALR-LNEAIVNGLMRL 222 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 G+K + DL + F + R + E G + P S +F E +T Sbjct: 223 GLKKIGDLYGKPRAPVTARFGPEVSRRLDEALGFEPEPISPELPPV-FYRASITFSEGLT 281 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 + A+ AA E L EHQ R + + + + D Sbjct: 282 RNAHIEDAVKRIAADLCEVLEREHQGARRLELQLFRVDGEVTR------LQAGTGIASHD 335 Query: 319 SRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 + + L + + G + + AQ ++++ ++ L Sbjct: 336 AFHLSRLFREKLAQLGDDFDTGFGVEALTLSCLAVDELKPAQETFENESS---RAQALEQ 392 Query: 376 VMDTLNAKEGRGTLYF 391 +D L+ + G + Sbjct: 393 FIDRLSNRFGADRVLR 408 >UniRef50_UPI0001B4E7CA hypothetical protein SvirD4_08371 n=2 Tax=Streptomyces RepID=UPI0001B4E7CA Length = 482 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 94/277 (33%), Gaps = 14/277 (5%) Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 LEE +P V+ D A DL G D + IR L + +G L Sbjct: 25 LEEFTPVVQALPPDGALADLRGAERYFRRDAVELASVIRVRSLALHGVDCVIGAGPGPML 84 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD 205 A++A A + + ++ PV + G+G ++ L G+ T+ Sbjct: 85 ARMALRDAAP----GVTRTVPDEPDAIAEFLADQPVAALPGVGTATARTLGDYGLDTLGR 140 Query: 206 LADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 +A + +++ + G ++ + + R FG + R Sbjct: 141 VAAAPLSTLQRLIGAKPGRELREKANGVDRGRVVP-NAVARSLATERPFGRDELNPERHR 199 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSP------FALNEPYYGNSASVKLLTPTQD 318 +A+ S A +LR+ + CR ++ ++ + + + S L PT Sbjct: 200 RALLSAAEEIGARLRALEKVCRTLTLTMRYADLPHSRTGSSGGTPIATTRSRTLTEPTAH 259 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 S + AA +A+ R + + + Sbjct: 260 SPALTRAAYGMYEALGLQRARVRAIALRAEGLDPKKP 296 >UniRef50_D1WSU8 DNA-directed DNA polymerase n=3 Tax=Streptomyces RepID=D1WSU8_9ACTO Length = 335 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 60/348 (17%), Positives = 111/348 (31%), Gaps = 24/348 (6%) Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + + + R + E Y ++ L +L+P V+ D A D+TG D Sbjct: 7 RARSVLRVQLHGLGPAGQERYEQA----LALLRDLTPLVQALPPDAADLDVTGALRFFDR 62 Query: 117 TDFGREIRATVLQRTHL--TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQ 172 G A + HL +G + LA +A A+ G V + + Sbjct: 63 DTGGLAAMAALRLAAHLGLRATIGAGPNRMLAAMAADASAP------GQVTVVAPDPGAV 116 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRG 231 + P+ + G+G ++ L G+ V DL D + +++ + RG Sbjct: 117 AAFLRPKPLGALHGVGPATARTLGEYGLHRVGDLLDVPLLTLQRILGRATALTLSQRARG 176 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + A + S FG D + R+A+ R +LR+ Q ++ Sbjct: 177 LDPRPVTSDAAP-RSTGFSHEFGHDELDPAAHRRALLDLCERLGLRLRTTGQVAVRLALN 235 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 I + A + S L T + + AA R + V Sbjct: 236 ISYADGATTQ------RSRTLEEYTAHTPALSAAAYDLYSRFGLQRARVRTITVRAELTD 289 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 ++ Q L D ++ D + G + ++ Sbjct: 290 ARYAVQQLLLDPA--DGKRRRIEQAADRARTRFGDQAIRPGTLARPRR 335 >UniRef50_A4S4R4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S4R4_OSTLU Length = 534 Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats. Identities = 78/470 (16%), Positives = 146/470 (31%), Gaps = 108/470 (22%) Query: 1 MFALCDVNAFYASCETVF------------RPDLWGKPVVVLSNN--------------- 33 + A D++AFY E R P+VV+ N Sbjct: 11 VVAHLDLDAFYCQVERRDLRAKTAAGRRDGRASAEDVPLVVVQYNPFERGGVRALAPDDD 70 Query: 34 --------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS-----SNYELYADM 80 + +IA + EA+A GVK + + L C VV ++ LY + Sbjct: 71 RELRDGFENHSLIAVSYEARARGVKRNMRGREARALAPACAVVQVPTRRSKADLTLYREA 130 Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGV------------------------------ 110 V + L +E SIDEA+ DLT Sbjct: 131 GREVAAVLAR-GGTIERASIDEAYLDLTESAKKVLEETAWATILEKARTSHAAGASAVSG 189 Query: 111 -------RNCRDLTDFGRE-------------IRATVLQRTHLTVGVGIAQTKTLAKLAN 150 RD +++ E +R + T+ GIA K LAKL + Sbjct: 190 KGYASVAWWNRDESEWREEEKLLAAGAYICFNLRKACVDELGYTLSAGIALNKMLAKLTS 249 Query: 151 HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADT 209 K + + + L+ LP+D + G+G + ++L + +KT+ +LA T Sbjct: 250 GMNKPASQ------TVLCPDHTSTLLDELPIDRIRGLGAKFGRELADGLNVKTIGELART 303 Query: 210 DIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE--RITDYPSMRQA 266 +R + + + + G ++ + I ++F I S + Sbjct: 304 PLRKLEEVCGEEKAQWVRKVSLGLDDDPVKAREMP-KSIGTGKTFRGALAIRSIASAKHW 362 Query: 267 ICSYAARAAEKLRSE----HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + A ++ ++ ++ + ++ + + S L P D Sbjct: 363 LAELTAELNDRCEADEEEWNRVPKLLTLGLSSPD-ERETSSGHCSRRCPL-RPGADEMAQ 420 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 S A + V +F S ++ + + + Sbjct: 421 DALTLLSKWASGRERWSITGMSVSASNFVSLEKDSGDVVEMFKNATKAAK 470 >UniRef50_A0NRW5 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRW5_9RHOB Length = 481 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 54/381 (14%), Positives = 118/381 (30%), Gaps = 27/381 (7%) Query: 13 SCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 + E R P + N + A++ G+ G + G++ Sbjct: 7 AAERSLRARPVDAPFALSLFDRNSERLYDLCPRAESFGLNRGMTLVHARSFCP--GLLTR 64 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 ++ + P V + + F D+TG + + + L R Sbjct: 65 PADPAADQRFLRMLARWATRYCPWVGLDGRNGLFLDITGSAHLLGGEEPLLDDIRARLAR 124 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 LT +G+A T A + A+ ++ + LP+ + + + Sbjct: 125 AGLTARLGLADTPGTAWALSRFAEG----------IAETGETLARIGPLPLSALR-LSDQ 173 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 L+ +GI TV L + + + + + R + + G Q+ Sbjct: 174 TCTSLERLGIATVSQLYNLPRATVARRYEPDVLRRLDQALGALPEQISPLGEE-PGFAVR 232 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 + + I + A A ++L + + R + + + + Sbjct: 233 MTLPDPIGLLDDVMAAARRLTAHLCQRLDTAQKGARSLKLTFRRVD------QENQAVEL 286 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 KL P +D I+ R + A+ AG+ + + G+ QL+ Sbjct: 287 KLARPMRDPERILALFERGVSAV-DAGYGIDMIRLEATEVEPLGMRQLD----RTEGLEK 341 Query: 371 EQLMTVMDTLNAKEGRGTLYF 391 + L ++ L + G + Sbjct: 342 DGLDDLITQLGNRVGLDNILR 362 >UniRef50_C1SJI9 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJI9_9BACT Length = 250 Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 80/247 (32%), Gaps = 14/247 (5%) Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 + + K M + + +WGIGR++ + MGI DL + + F + R Sbjct: 6 TTTDEAVKFMDSFELGKIWGIGRKLDARFRNMGIFNTADLRQLGEERLCEMFGLNGSRIY 65 Query: 227 RELRGEPCLQLEEFA--PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 G + E + I S + I I + + + R Sbjct: 66 EMACGRYPDGVNEQKKEEPVKSIGHSMTIPHDIRSREEAASYILQLSEMVSARARKNGYS 125 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 + + I+ + T + I A D +W + + G Sbjct: 126 GKTLHLTIR------DSEMGTVGKRRTFGFFTSATHHIYEIAMSLFDELWDD-YPIRLLG 178 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 + LG V N+ DD P + +D +N K G+ + +A ++ K Sbjct: 179 ISLGSLVPGCVMLSNIMDDFQGWPD---IYDAIDKINDKYGKQVISYASVLKCKRRGAK- 234 Query: 405 AMLSPRY 411 +SP + Sbjct: 235 -TISPAW 240 >UniRef50_Q2TTW3 UmuC n=8 Tax=Enterobacteriaceae RepID=Q2TTW3_ECOLX Length = 202 Score = 144 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 128/196 (65%), Positives = 151/196 (77%) Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 + L N+ R KL+S PV+++WG+GRRISKKL+ MGI T L LA FIRK+FNVVLE Sbjct: 4 LTLGNIRRTEKLLSLQPVEEIWGVGRRISKKLNTMGITTALQLARATPVFIRKNFNVVLE 63 Query: 224 RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 RTVREL GE C+ LEE P KQ+I+CSRSFGER+T Y +MRQA+C YA RAAEKLR E Q Sbjct: 64 RTVRELTGESCISLEEAPPPKQQIVCSRSFGERVTTYEAMRQAVCQYAERAAEKLRGERQ 123 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 +CR I+ F+KTSPFA+NEPYYGN AS KLL PTQD++DII AA R+LD IW GHRY KA Sbjct: 124 FCRHIAVFVKTSPFAVNEPYYGNMASEKLLIPTQDTQDIIAAAVRALDRIWVDGHRYAKA 183 Query: 344 GVMLGDFFSQGVAQLN 359 G ML DF GV+ LN Sbjct: 184 GCMLNDFAPDGVSLLN 199 >UniRef50_B0NK47 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NK47_EUBSP Length = 290 Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats. Identities = 43/245 (17%), Positives = 84/245 (34%), Gaps = 7/245 (2%) Query: 165 DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER 224 L +R L S P+ D W +G I+++L++ GI T+ D+A D + + F + E Sbjct: 41 ILEEESYKRTLWSHRPLTDFWRVGSGIARRLESAGIYTMEDIAKADEDMLYRMFGIDAEL 100 Query: 225 TVRELRGEPCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 + G ++ + P + I S+ G D+ R A KL + Sbjct: 101 LIDHAWGRETTTIADIKAYRPKENSISSSQVLGCD-YDFEGGRLIAKEMADLLCLKLVEK 159 Query: 282 HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQ 341 IS ++ S ++ + T ++ I+ + I Sbjct: 160 GLVTDPISLYVGYSR---RLQKKSAHGTITMPVTTSSAKKIMGYTQELFEQIVDRNAPIH 216 Query: 342 KAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 + + + Q +LF D A ++ M + K G+ + + Sbjct: 217 RVTLAFNRVVDEMYQQYDLFTDPAEIEREHKIQKTMLEIKEKFGKNAILKGMNLEKGATT 276 Query: 402 MKRAM 406 +R Sbjct: 277 KERNR 281 >UniRef50_B6BEE1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=17 Tax=Rhodobacterales RepID=B6BEE1_9RHOB Length = 492 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 64/379 (16%), Positives = 118/379 (31%), Gaps = 27/379 (7%) Query: 15 ETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 E V R P + N + NA A G+ G + + + ++ Sbjct: 20 ERVLRRCPVDGPFALTLKQQNANRIYCLNAAASEQGLHPGMAYADARAFCPD--LQSGAA 77 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTH 132 E + P V D D+TG + + L R Sbjct: 78 EPEQDQLFLRLLCRWAARYCPWVGAEGTDGLVLDITGAAHLFGGEEAMLADMRMRLMRAG 137 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 L+V G+A T+ A H + ++ + LP+ + I +IS Sbjct: 138 LSVQAGLADTRGAAWALAHYGEG----------IAPTGETLPSLKHLPIAALR-IDEQIS 186 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 L +G++++ DLA + + F L R + + G + AP + Sbjct: 187 VTLQRLGVRSIGDLAGAARAPLNRRFGPALLRRLDQALGTEPEAISPQAPPPH-YAVRMT 245 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 E I + +KL+S + R + ++ ++L Sbjct: 246 LPEPIGLLSDVMTGAERLLLPLCDKLKSHEKGARELHLTLRRVD------QGHQQVELRL 299 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 P +D + I+ R L+ I AG + S V Q + G ++ Sbjct: 300 ARPLRDPQRILPLFERGLNEI-DAGFGIDMLRLEATQVESLPVQQ----SSHVSDGGKDK 354 Query: 373 LMTVMDTLNAKEGRGTLYF 391 L ++ L + G + Sbjct: 355 LDDLISRLGTRIGLENIQR 373 >UniRef50_B2I406 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I406_ACIBC Length = 261 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 2/208 (0%) Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 +K F+VVL RTV ELRG PC+++E P++++II S+SFG+R+T +++AI Y A Sbjct: 3 KKQFSVVLARTVMELRGIPCIEIEHSPPSQKQIISSKSFGQRVTALEDLQEAISRYTQDA 62 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 +LR + C I F ++PF YY S++ + PT + ++ AA + ++ ++ Sbjct: 63 FRRLRKANLLCGCIIVFAHSNPFDNKRKYYYKSSTSGFVVPTDNVLTLVEAAVKLIEKVY 122 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 G Y+K G++L + + +L D E LM +++ K G+ L Sbjct: 123 TEGIEYKKCGLILTGLEPKSLFTYDLLTDMDDIAKQENLMLAFESITNKFGKKKLAVGTC 182 Query: 395 GI-QQQWQMKRAMLSPRYTTRSSDLLRV 421 ++W M R LS Y +LL++ Sbjct: 183 MFPDRKWTMCRNSLSQNYF-SWDELLKL 209 >UniRef50_A8LY61 UMUC domain protein DNA-repair protein n=24 Tax=Actinomycetales RepID=A8LY61_SALAI Length = 528 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 58/399 (14%), Positives = 116/399 (29%), Gaps = 38/399 (9%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 S + PV VL N V+A + +A+A GV+ G + + + VV Sbjct: 16 VSAAELVDGVPATDPVAVLHANR--VVACSEQARAKGVRRGLRRREAQSRCPQLTVVAH- 72 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTDFGREIRATVLQR 130 + V++ +EEL V + G R+ I V Q Sbjct: 73 -DPARDTRAFEPVVAAVEELVAGVAVVRPGVCAIPARGPARHLGGEEAAAERIIEQVAQA 131 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 + VGIA A LA + + ++ PV+ + Sbjct: 132 CAVESQVGIADGAFAAGLAARTGQA-----------VPPGGTPRFLADQPVEALGR--PA 178 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 ++ L +G++T+ D A + F + G L P + + Sbjct: 179 LADLLRRLGVRTLGDFAALPSGDVLARFGADGALAHQLAAGRDHRPLAVRQPPAD-LTVT 237 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 E + + + A R ++L + C + T+ + + + Sbjct: 238 VDQDEPLDRVDAAAFVARALAERLHDRLTAYGLACTRLGIEAVTAHGQELHRTWRHDGLL 297 Query: 311 KLLTPTQDSRDIINAATRSLD----------AIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + I + LD + + ++ + G Q L Sbjct: 298 T-------AAAIADRTRWQLDGWLSGGRSGTESARPTAGIVRLRLVPDGVVASGALQPGL 350 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + + ++ + + G + A G + Sbjct: 351 WGEAG--EERDRAHRALSRIQGVLGPEAVVTAVLGGGRS 387 >UniRef50_B9JES9 Nucleotidyltransferase protein n=14 Tax=Rhizobiales RepID=B9JES9_AGRRK Length = 475 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 62/376 (16%), Positives = 116/376 (30%), Gaps = 27/376 (7%) Query: 35 GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR 94 + A N +A+ +G+K+G + K + V+ + + + + + +P Sbjct: 1 MRLTALNEKAEIIGLKLGLGVAEAKAICPALDVI--EEDPAADRKLLEAIANWCDRYTPL 58 Query: 95 VEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 V I D F D+TG + + E + L V I+ L+ Sbjct: 59 VAIDGKDGLFLDITGCAHLFGGEEALLEDILIRISGLGLDVRGAISSAPGLSWAVARFD- 117 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + + + ++ LPV + +G L +G+K V DL + Sbjct: 118 --------DSRVVPPDAMEEALAPLPVASLR-LGEETVAALQKLGLKQVGDLLVAPRAPL 168 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 + F L + + G + P Q + R E + + Q A Sbjct: 169 TRRFGAQLLLRLDQAIGLTEEPISPRRPVAQ-LSAERRLAEPVQAEADILQLARELAEAL 227 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 L + R + A+ G S P ++ R I T AI Sbjct: 228 KPGLEARGVGGRLFELLLFRVDGAVFRIAAGAS------QPLREPRRIAGLFTERFTAIH 281 Query: 335 QA---GHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 G+ ++ + + Q + L D + A+ G L Sbjct: 282 DDLDVGYGFEIVRLNVLQHAPFDAMQGDF---VEEDRQGTSLAAFADRVAARLGPDCLQ- 337 Query: 392 AGQGIQQQWQMKRAML 407 G ++Q +RA Sbjct: 338 -GFELRQSHIPERAAR 352 >UniRef50_D0CTA7 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=12 Tax=Rhodobacterales RepID=D0CTA7_9RHOB Length = 550 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 60/412 (14%), Positives = 120/412 (29%), Gaps = 53/412 (12%) Query: 22 LWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYAD 79 L P+ V+ +N + + N A+A G+++G P + +V N A Sbjct: 26 LHSGPLAVVAEQSNMQVITSLNTAAQAAGLRVGQPVRDAHAMC--AALVTRPRNAPAEAA 83 Query: 80 MSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGI 139 + + SP V + D DL+G + + ++ T L+V +GI Sbjct: 84 FLTALRRWAGKFSPWVAEEASDGLIVDLSGCAHLFGGEEALLDVIETDCADMGLSVQMGI 143 Query: 140 AQTKTLAKLANHAA-----------------------------------KKWQRQTGGVV 164 A T A A GG Sbjct: 144 ADTLGAAWALARYAGQEATSDRNGDAISQEARATRARAGKRRHWTKGGAAPQVVAVGGGA 203 Query: 165 DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER 224 ++ + ++ LP+ + + + +L+ +G++ + DL + + F L Sbjct: 204 RIAPPGQAYGALAPLPIAALR-LDDQTVAQLNRLGLRRIGDLLGQPRASLARRFGRGLVL 262 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 + + G + P + I + AI +L + + Sbjct: 263 RLDQAMGSAPEPVSPARPPHH-FAVRMTLPNPIGLAEDVMAAIDRMLPTLCARLEEKARG 321 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 R + + A + L P+ D I +D I AG+ Sbjct: 322 ARTLRLEAHRTDQAAEI------IEIGLARPSHDKHRIRPLLEMKIDQI-DAGYGIDMLR 374 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSE-----QLMTVMDTLNAKEGRGTLYF 391 + L + + + L ++ L A+ G + Sbjct: 375 LAAVQTEPVHARTLTGHAEASRAVRNRLEGNTALDDLIGKLGARVGLDAITR 426 >UniRef50_UPI0000D878BE hypothetical protein CIMG_06713 n=1 Tax=Coccidioides immitis RS RepID=UPI0000D878BE Length = 1404 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 62/438 (14%), Positives = 132/438 (30%), Gaps = 81/438 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CE V +P+ V +IA N A+ + + K Sbjct: 55 VVAHIDLDAFYAQCEMVRLNTPRTQPLAV--QQWESLIAVNYAARPFNISRMITAKEAKA 112 Query: 61 LFRRCGVVCF------------------------SSNYELYADMSNRVM--------STL 88 + V + + Y S +++ + Sbjct: 113 RCPQLMTVHVATFREGEGGKWAYREDGDHNVATDKVSLDPYRAESRKILGTIKDGLVAWA 172 Query: 89 EELSP-------------------------RVEIYSIDEAFCDLTGVRNCRDLTDFGREI 123 E++ P R+E IDE F DL+ + L + Sbjct: 173 EKVDPCGLGERRTESGGSVKEKEKDWTNMVRIEKAGIDEVFIDLSALVWATLLERYPMLQ 232 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ--RQTGGVVDLSNLERQRKLMSALPV 181 V + + A K+ + G + + + ++ + Sbjct: 233 EMEVKREMSERL-------PRPPTTALDWGKEDELVDLDEGETEEDDPDW-DDVVMLVGA 284 Query: 182 DDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEE 239 D V +G ++ K++ + + V +L + + + +RG ++ Sbjct: 285 DIVRMLGGKLGKQIASTFETEQVDELLRVPLEQFKAKLDDDTGMWLYELIRGNDWSEVNP 344 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + +I ++SF I + + +AA +L E + + + Sbjct: 345 RT-QIKSMISTKSFRPGINSLEQAEKWLRIFAAEIYGRLVEEGV----LEHKRRPKVLTI 399 Query: 300 NEPYYGNSASVKLLTPTQ---DSRDIINAATRSLDAIWQAGH--RYQKAGVMLGDFFSQG 354 + + G++ S ++ PT D + A L + GH + + F Sbjct: 400 HHRHSGHTKSRQVPIPTGMAIDEEPLFALAKDLLKQVTNEGHMWPCMNLALTVSGFEDGV 459 Query: 355 VAQLNLFDDNAPRPGSEQ 372 +L +E+ Sbjct: 460 SGNQSLDSFFTRATDTER 477 >UniRef50_C8VFX8 DNA polymerase iota, putative (AFU_orthologue; AFUA_4G11140) n=3 Tax=Eurotiomycetidae RepID=C8VFX8_EMENI Length = 573 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 106/361 (29%), Gaps = 86/361 (23%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D + FYAS +P L P+ V V+ N EA+ G++ + K Sbjct: 12 IILHFDYDCFYASVFEAEQPILKTLPLAV--QQKQIVVTCNYEARRRGLRKLQLIKEAKQ 69 Query: 61 LFRRCGVVCFSSNYELYADMSNRVM------------------STLEELSPRV------- 95 + V+ + + D S + +++ + Sbjct: 70 ICPDV-VIILGEDLTKFRDASKDLYLFFRRSIWGERVERLGFDEIFMDVTDMITYNAGLL 128 Query: 96 -------------EIYSIDEAFCDLTGV----------------------RNCRDLTDFG 120 D T V + F Sbjct: 129 NPNDLTHSFFHLDSRDPTVGFAFDATAVYGRTYPNDRSGKPLSEADTQLHLRLLLASHFA 188 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ---TGGVVDLSNLERQRKLMS 177 +R+ + + T GI+ +K LAK+ A K + + + Sbjct: 189 GYLRSQLENQKGYTATAGISTSKLLAKVVGSAHKPNNQTTLLPPYSSTGDCESNVLRFLD 248 Query: 178 ALPVDDVWGIGRRISKKLDAM----------GIKTVLDLADTD---IRFIRKHF------ 218 + + + GIG ++S+KL + T+ D+ + + Sbjct: 249 SREIRAIPGIGSKLSRKLISHITASDQSAVENKVTIRDVRAFPGMGPSLLERILGGPGAP 308 Query: 219 NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 + + L G Q+ E T +I S+G + + ++R+ + S AA ++ Sbjct: 309 RDIGVKIWGLLHGVDGTQVGEARDTPTQISIENSYGH-LDTFEAVRKEMLSLAASLIRRM 367 Query: 279 R 279 R Sbjct: 368 R 368 >UniRef50_Q3SQD1 DNA-directed DNA polymerase n=14 Tax=Bradyrhizobiaceae RepID=Q3SQD1_NITWN Length = 501 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 114/374 (30%), Gaps = 21/374 (5%) Query: 35 GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR 94 + A N A LG+ +G P + + F ++ A N + + +P Sbjct: 1 MVISALNDAAARLGLTIGLPLANARAICPDID--VFDADETADARTLNGIADWCDRFTPL 58 Query: 95 VEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 V + D+TG + + L R V IA T A+ Sbjct: 59 VALDPPHGLLLDITGCAHLFGGEAALMNALCSALTRQGFAVSAAIAGTPACAR------- 111 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + + + ++ LPV + G I++ L G+KT+ D+A I Sbjct: 112 --ALTRHVHGRIVAPGEELEAVAPLPVFTL-GTDDEITRGLRRAGLKTIGDVAVRGRHEI 168 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 F + + G+ + P I + F E I ++ + A Sbjct: 169 AARFGAAFTALLEQTLGQRDAPINPRRPPPDYI-VEKRFAEPIATDSAIAMTLAGLARTL 227 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 + + + R + + A+ V + +L Sbjct: 228 IAAMEKQGKGARHLEAGFFRTDGAVRVITVETGRPVTRGEIVD---RLFRERLDALADPL 284 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 G + + S Q +L +A ++++ ++D + A+ G + Sbjct: 285 DPGFGFDLVRLSAVRTESVVHEQRDL---DARVQDNDEVAALIDRIAARIGSHRVV--VH 339 Query: 395 GIQQQWQMKRAMLS 408 Q +R LS Sbjct: 340 LPQDTHIPERGALS 353 >UniRef50_B5H9Q9 Putative uncharacterized protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H9Q9_STRPR Length = 330 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 59/323 (18%), Positives = 109/323 (33%), Gaps = 19/323 (5%) Query: 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTH 132 +Y +++ E++SP V+ D A D+ G +R L Sbjct: 20 PMYEAALPALLAVAEDISPVVQALPPDAALVDVRGAERYFGRDAAQLASLLRVRALAHCG 79 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 + +G +A++A A G + E + PV + G+G + Sbjct: 80 VDCVIGAGPVPMIARMAAREAVP------GTTLVVTEEETAAFLDGRPVAALDGVGPVTA 133 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSR 251 + L A G+ + +A + I++ RG + A + + R Sbjct: 134 RTLCAYGLDSAGRVAGAPLAVIQRILGARAGREVWERARGIDRTAVVPNAL-SRSMAAER 192 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 SFG D R+A+ S A ++R E Q CR ++ ++ + + Sbjct: 193 SFGLDELDQIEHRRALLSLAEELGSRMRGERQVCRSLTLTVRYADRSTTTRTRTL----- 247 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL-FDDNAPRPGS 370 PT S + + A + + R + + D + A L FD + Sbjct: 248 -REPTAHSAALADTAYALHEVLGLQRARVRGLSLRAEDLTAAERAARQLTFDPA--DERA 304 Query: 371 EQLMTVMDTLNAKEGRGTLYFAG 393 ++ V D AK G G + Sbjct: 305 RRIEEVADRARAKFGPGAVVPGS 327 >UniRef50_C8XBY5 UMUC domain protein DNA-repair protein n=23 Tax=Actinomycetales RepID=C8XBY5_NAKMY Length = 510 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 63/399 (15%), Positives = 113/399 (28%), Gaps = 31/399 (7%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 A+ RP PV VL N V A A A+A GV +G + ++ Sbjct: 16 AAARQANRP--ASDPVAVLHANR--VRACTAAARAQGVHVGQRRRDAQSRCPD--LLITG 69 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 + + A M V + +E L+P VE+ C G E ++ Sbjct: 70 VDQDRDARMFEPVAAAVESLAPGVEVLRCGVVACPARGPARYFGSEAAAAERIVDAVEAL 129 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV---WGIG 188 + +GIA +A LA H + L + LP+ D+ IG Sbjct: 130 DVECCIGIADDLEIAVLAAHRS-----------VLVPPGESAAFCAGLPITDLSRDPAIG 178 Query: 189 R----RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK 244 ++ L +GI T A + F R G P L + Sbjct: 179 PPDRVALTDLLIRLGITTAGAFAALPPEKVATRFGADGVCAHRLALGRPERGLSRRQIPE 238 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 ++ + + + A + A R +L C + T A + Sbjct: 239 D-LVVEQECDPPLDRVDTAAFAARALAERFHARLADAGLACTRLVITAATDRGATLSRTW 297 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 +A + + Q + + + G Q L+ + Sbjct: 298 RCAAPLTAAATADR----LRWQLDGWLTHRQQPGAITRLALEPVEAVGSGHIQYGLWGSD 353 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 ++ + G ++ + + Sbjct: 354 GQDD--QRAGWAFARVQGLLGPDSVLSPVPAGGRSTADR 390 >UniRef50_A5VH01 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=4 Tax=Alphaproteobacteria RepID=A5VH01_SPHWW Length = 519 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 68/413 (16%), Positives = 127/413 (30%), Gaps = 29/413 (7%) Query: 16 TVFRPDLWGKPV--VVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 P +P+ + + V A +A A+ALG+ G K + + Sbjct: 28 RRDTPTP-TRPLVTAIPDHGRRIVAAVDAGARALGIAAGMTITKARSFAPELD--VVDAQ 84 Query: 74 YELYADMSNRVMSTL-EELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTH 132 E + R+ + SP V + D + D+TG + + Sbjct: 85 PEADVEGLRRLALWAGQRYSPIVAPDAPDGLWLDITGCAALFSTEAALLKDLHRRVAAFG 144 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 ++V + +A T A G RK ++ LP+ + + + Sbjct: 145 VSVQIAVADTAGCAHAVAR------HVPAGRPVTIEPSDHRKAIALLPIAALR-LEADVV 197 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 + L +G + V L + K F L R + + G +E P R Sbjct: 198 EGLRKLGFERVEQLIGAPRGPLAKRFGRSLHRRLDQALGAVAEPIEPIFPE-HLPRARRG 256 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 F E I + Q I A ++L + R + + G Sbjct: 257 FMEPIATAEAFGQVIGDLVADIVDQLGRVGKGARRLDCYFHRVDGHTQVIRVGT------ 310 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 TP++D + ++ + + G + +++ Q + Sbjct: 311 ATPSRDQAHLSKLLCAKIETV-EPGLGIESMTLLVSLMEPVAARQGESLERLGKPGP--D 367 Query: 373 LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR----S-SDLLR 420 L ++DTL+ + G L+ + + A SP T DL R Sbjct: 368 LAALVDTLSNRFGSRCLHRMAPHPSE-MPERSATSSPALDTARGAGWDDDLPR 419 >UniRef50_C6XYX1 Cytosolic protein n=4 Tax=Sphingobacteriales RepID=C6XYX1_PEDHD Length = 500 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 54/378 (14%), Positives = 114/378 (30%), Gaps = 22/378 (5%) Query: 16 TVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 + +P+L G P V + + A EA+ G+ +G K + + Sbjct: 19 ALRKPELKGVPFVFATPDHGRMVITATTIEAELQGINVGMVAADAKAIVP--SLQVVDDI 76 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 + + + +P V + D D++G + + T L+ Sbjct: 77 PGKDLKLLSLLGEWCIRYTPFVTVDLPDGLILDISGCTHLWGDERSYLKEVVTRLRSKGF 136 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 V +A T A K V + Q + + +LP + + + RI++ Sbjct: 137 DVRGAMADTVGTAWAIARFGK--------VKPIIEPGEQAEALLSLPPEALR-LDNRITE 187 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 +L +G++ + +R+ F L + + G L+ P + Sbjct: 188 RLQKLGLRNIRSFIHMQRSALRRRFGQQLLLRLDQALGNEQELLQPLQPIE-AYSERLPC 246 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 E I + AI +L+ + + R L + G S Sbjct: 247 LEPIRTAIGIEIAIKQLLEMLCLRLKQDGKGLRTAILKCYRIDGELEQVSIGTS------ 300 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 + T + + I + + + Q L+ + + Sbjct: 301 SATYHISHLFKLFELKIATI-TPALGIELFVMEASKTEDVPLVQEGLWAGSLGLEAR-AV 358 Query: 374 MTVMDTLNAKEGRGTLYF 391 ++D L K G ++ Sbjct: 359 TELIDRLAGKVGANAIHR 376 >UniRef50_A9H958 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=A9H958_GLUDA Length = 494 Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats. Identities = 61/385 (15%), Positives = 115/385 (29%), Gaps = 23/385 (5%) Query: 11 YASCETVFRPD--LWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCG 66 + E + R +P+V S + A +A A+A GV G P + + L G Sbjct: 11 FLPVERLRRQHGVPPDQPLVTRSHDGRRQVIAAADAAARARGVTPGQPLAQAQALVP--G 68 Query: 67 VVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRAT 126 ++ + E A ++ ++P D + D TG + Sbjct: 69 LLVMPAAPEQDAAALAGLVRWCLWMAPLTAPDGADGIWIDATGCAHLHGGESAMLARLLD 128 Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 L R L+ IA T A + + + + LPV+ + Sbjct: 129 GLGRRGLSGRAAIADTPGAAHALAR-------HGRARLAVVPPGGHQAALDPLPVEALR- 180 Query: 187 IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQE 246 I R + L +G+ + L + + F L + + G+ + Sbjct: 181 IAPRTADMLHRLGLGRIGALRAAPRAPLARRFGPRLLARLDQASGQVAEPIRPVLAP-DA 239 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 + R F E ++ S R I A LR R + + G Sbjct: 240 MQARRGFVEPLSTPESFRVVIDVLLADLCATLRGRGMGARRLDLICERVDGTACAVRVGT 299 Query: 307 SASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 + D + + + G + +++ AQ ++ Sbjct: 300 AR------AVHDPAHLGRLLVERIGDV-DPGFGVEAMHLLVSAAERMMPAQRGT-GESGD 351 Query: 367 RPGSEQLMTVMDTLNAKEGRGTLYF 391 E L + D L + G G ++ Sbjct: 352 AEREEALSALADRLANRLGPGRVFR 376 >UniRef50_Q5Q9G7 Polymerase kappa isoform 2 n=34 Tax=Deuterostomia RepID=Q5Q9G7_HUMAN Length = 489 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P+L KP+ V S + + N A+ GV+ P F K L Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMS--MLSTSNYHARRFGVRAAMPGFIAKRL 160 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + ++ N++ Y +S V L + P S+DEA+ ++T ++ + ++ Sbjct: 161 CPQ--LIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNIT--KHLEERQNWPE 216 Query: 122 EIRA 125 + R Sbjct: 217 DKRR 220 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 62/187 (33%), Gaps = 6/187 (3%) Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + +EIR + Q+T LT GIA LAK+ + K + L N + Sbjct: 289 SAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQ----ILPNRQAVMD 344 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 + LP+ V GIG+ K L A+GI T +L + G Sbjct: 345 FIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 404 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 L ++ + R+F E I + A+ L+ E F Sbjct: 405 THL-TRDGERKSMSVERTFSE-INKAEEQYSLCQELCSELAQDLQKERLKVFGYLVFPMK 462 Query: 295 SPFALNE 301 N+ Sbjct: 463 RTGNTNK 469 >UniRef50_Q9UBT6 DNA polymerase kappa n=23 Tax=Tetrapoda RepID=POLK_HUMAN Length = 870 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P+L KP+ V S + + N A+ GV+ P F K L Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMS--MLSTSNYHARRFGVRAAMPGFIAKRL 160 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + ++ N++ Y +S V L + P S+DEA+ ++T ++ + ++ Sbjct: 161 CPQ--LIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNIT--KHLEERQNWPE 216 Query: 122 EIRA 125 + R Sbjct: 217 DKRR 220 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 84/248 (33%), Gaps = 16/248 (6%) Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + +EIR + Q+T LT GIA LAK+ + K + L N + Sbjct: 289 SAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQ----ILPNRQAVMD 344 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 + LP+ V GIG+ K L A+GI T +L + G Sbjct: 345 FIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHISLGLGS 404 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 L ++ + R+F E I + A+ L+ E R ++ +K Sbjct: 405 THL-TRDGERKSMSVERTFSE-INKAEEQYSLCQELCSELAQDLQKERLKGRTVTIKLKN 462 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR----YQKAGVMLGDF 350 F + + + + + + +I A L A + GV + F Sbjct: 463 VNFEVK------TRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMGVRISSF 516 Query: 351 FSQGVAQL 358 ++ + Sbjct: 517 PNEEDRKH 524 >UniRef50_B9KR94 DNA repair enzyme n=4 Tax=Rhodobacter sphaeroides RepID=B9KR94_RHOSK Length = 534 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 63/406 (15%), Positives = 116/406 (28%), Gaps = 43/406 (10%) Query: 16 TVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 R D P V+ +++ +AEA+ALG+ G + ++ S + Sbjct: 20 LRRRKDTLPPPFAVVGDRQGAQVLVSVSAEAEALGLGPGQGLRDATAICPH--LMTASED 77 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 A + + SP V DLTG + + + L Sbjct: 78 PASEAAFLAALRRWAGKFSPWVAEEPPAGLMIDLTGCAHLFGGEEKVLGVVEADCAGLGL 137 Query: 134 TVGVGIAQTKTLAKLANHAAKK---------------------------WQRQTGGVVDL 166 TV +A T A A + + +GG + L Sbjct: 138 TVRAAVADTPGAAWALARHAGRALQGNLNGDAIEQEAHATRSRASRRRTFAPPSGGPLGL 197 Query: 167 SN-LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 + R + LPV + + + L +G++ V DL D + + F + R Sbjct: 198 ISAPGALRAALEPLPVAALR-LSEGTVQSLARLGLRRVGDLLDLPRASLARRFGQEVTRR 256 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 + + G + + + I + + ++L+ + + Sbjct: 257 IDQALGLEPEPVSPAGAPLH-FAVRLTLPDPIGLREDVEAGLDRLLGPLCDRLKEKGRGA 315 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 R + S + V L T I +D I AG + Sbjct: 316 RRVRLQAFRSDGQVPAV------EVGLAQTTCAPERIRPLLALKIDQI-DAGFGIDMLRL 368 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 + VA +E L V+ L A+ G + Sbjct: 369 SAVETELLTVASGK--GRGPAGRPAEVLADVVGRLGARLGAEGVTR 412 >UniRef50_C4Q445 DNA polymerase eta, putative n=3 Tax=Schistosoma RepID=C4Q445_SCHMA Length = 400 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 54/346 (15%), Positives = 109/346 (31%), Gaps = 75/346 (21%) Query: 39 ARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSP 93 A + EA+ALG+K G + + + + Y D S+ V+ + E + Sbjct: 6 AVSYEARALGIKRGMFSDEIRVQHPEVIIFKVPEKRGKAELTRYRDASSEVIQCISEFTS 65 Query: 94 RVEIYSID----------------------------------EAFCDLTGV--------- 110 +E SID E+ +LT Sbjct: 66 DIERASIDEAYVDLTVLIQDHNLSSLHPNPESYVLVNSDIAEESKLELTETNCVSLSGVD 125 Query: 111 ------------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR 158 R ++ IR V +T GI K++AKLA K ++ Sbjct: 126 WIKLLDSNFAEGRRLAVASELVYRIRQAVFTKTGFKCSAGIGPNKSIAKLACSLNKPNKQ 185 Query: 159 QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKH 217 + E L+ ++ + +G ++ + + I+T+ L+ + + K Sbjct: 186 ------TIIPQESIPILLENTHINKIRNLGGKLGSTVVKKLKIETLGQLSSIPLSVLTKE 239 Query: 218 F-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARA 274 F + G + + + + CS++F R +T +++ + A Sbjct: 240 FGEKTSKWLHDLSHGIDHEVVTTRSLP-KSVGCSKNFLGRATLTSSEQIKRWLLCLAEEI 298 Query: 275 AEKL----RSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 E+L +Y + + +T+ + LL Sbjct: 299 FERLDVDYHQHQRYPTRLILYARTTNDPGYIGGISRTLPSNLLQFI 344 >UniRef50_UPI00019063AA putative nucleotidyltransferase protein n=2 Tax=Rhizobium etli RepID=UPI00019063AA Length = 380 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 51/345 (14%), Positives = 107/345 (31%), Gaps = 30/345 (8%) Query: 13 SCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVC 69 S + RP+ P +V S NN + A + AK LG+K + + ++ + Sbjct: 18 SWRSKERPE---APPIVCSAKLNNAMRLTALDEWAKRLGLKKDQGVAEARAMYP--TLEV 72 Query: 70 FSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQ 129 + + + + +P V D F D+TG + + + L Sbjct: 73 VEEDPAADRRLLEAIADWCDRYTPLVAFDGKDGLFLDITGCTHLFGGEKALLKDVLSRLF 132 Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR 189 + I+ + L+ + G + E +++ +LP+ + G Sbjct: 133 HMGIDARGAISSSPGLSWAVSRF---------GQSGVIGDEEMERVLMSLPIAALRLQG- 182 Query: 190 RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 + L +G+K + D+ + + + F L + + G + P + Sbjct: 183 QTVDALKKLGLKYIGDVINAPRAPLTRRFGPELLLRLDQALGHEEEPVSPRRPVA-SLSA 241 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSAS 309 E I + A L + R + + S Sbjct: 242 ESRLIEPIGTEEQILAVTRQVAVSLQPSLEARGAGGRVFELVLFRVDGRV------FRIS 295 Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQA-----GHRYQKAGVMLGD 349 V P ++ + I + L A++ G + V+ D Sbjct: 296 VGASQPLREPKFIAGLFSERLQAVYDDLDAGYGFEIVRLNVLQHD 340 >UniRef50_B5HS70 Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HS70_9ACTO Length = 323 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 66/328 (20%), Positives = 101/328 (30%), Gaps = 21/328 (6%) Query: 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTH 132 E Y + L LSP V+ A DL G G +R + R Sbjct: 14 ETYRQVLEE----LAGLSPVVQALPPTAALVDLRGALPYYGVDARRLGEVLRIRTISRLG 69 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 + V VGI T T+A A+ Q G V E + LPVD + GIG R + Sbjct: 70 VDVRVGIGPTITVAATASG-----QIPRPGGVLAITPEEVAGWLGPLPVDALHGIGPRQA 124 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 L G+ V LA +++ RG + P + Sbjct: 125 TVLRDYGVHCVGLLAALPPATVQRLLGGKAGRLAADRARGIARPVVPRALPATASVRYR- 183 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 F E D +R A+ R +LR Q R ++ + + + + Sbjct: 184 -FDEHTLDGAVVRAALLELVVRLGTRLRGRDQAARALTLSLTFAGG------GSWDKTRR 236 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 L P+ D+ A + +DA + D A L + R Sbjct: 237 LTAPSAHEDDLRQLAYQLMDAAGLQRGLLTGLVLKAEDLLDADQAPRQL-SLDDAREARL 295 Query: 372 QLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +D + K G + A + Sbjct: 296 ATEGAVDRIRDKFGTRVIGPAAVFRRAS 323 >UniRef50_Q99QR3 Putative uncharacterized protein SCP1.321 n=4 Tax=Streptomyces RepID=Q99QR3_STRCO Length = 341 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 63/321 (19%), Positives = 106/321 (33%), Gaps = 16/321 (4%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DFGREIRATVLQRTHLTVGVGI 139 +V+ L +LSP V+ A +L G G +R L R + V VGI Sbjct: 34 RQVLELLTDLSPVVQALPPTAALVELKGALRYHGSEVHRLGEVLRVRTLSRLGVDVRVGI 93 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 + T+A A+ GGV+ ++ + ++ LP + + G+G R + L G Sbjct: 94 GPSITIAATASAQV----PLPGGVLTVA-PDDVTDWLAPLPGEALHGLGPRQAGALHEYG 148 Query: 200 IKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 I TV LA +++ RG + A F + Sbjct: 149 IHTVGLLAAVSPETVQRLLGGKAGRLAADRARGRDPRPVVPRALPAAA-TVRMRFDRHVL 207 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 D +R A+ + LR Q R +S ++ + S +L P+ Sbjct: 208 DGADVRAALLDLVVQLGRLLRRRGQAARAVSLTLQFAGG------GSWEKSRRLPEPSAH 261 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 D+ A R +DA R + D + + R +D Sbjct: 262 DEDLRTMAYRLIDAAGLQRGRLTGLFLKADDLVDADRVAQQI-SLDQAREARLVAEATVD 320 Query: 379 TLNAKEGRGTLYFAGQGIQQQ 399 + K G G + A + Sbjct: 321 RVRDKFGPGVIGPAATARRAS 341 >UniRef50_A4XTN1 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=33 Tax=Gammaproteobacteria RepID=A4XTN1_PSEMY Length = 473 Score = 134 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 60/393 (15%), Positives = 121/393 (30%), Gaps = 29/393 (7%) Query: 24 GKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 +P+V+L + A N A+ALG+K G + L R + Sbjct: 26 TEPLVLLGGPPQRRVLQAVNPAARALGLKPGQLLSAAQALTRGFA--SADYDLAAIERWQ 83 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQ 141 + + S +V ++ ++ L + +A Sbjct: 84 QFLAAWAYGFSAQVSLHYPRCLLLEVGSSLGLFGPWPHFEARLRRELGELGFQQRITLAP 143 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK 201 A++ + + + + R + LPVD + G+ R + L MG++ Sbjct: 144 NPVAARMLANVH--------DGLAIGDAAELRAALERLPVDRI-GLSRETASALTRMGLR 194 Query: 202 TVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 ++ L + + F L R + L GE L L+ + P + + + Sbjct: 195 SLQQLLALPRDGLARRFPAELLRHLDSLLGERALALDFYRPPDR-FDTRIELNFEVESHQ 253 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD 321 ++ + A A L + + + + V LL+ +D Sbjct: 254 ALLFPLRRLTADLAAYLAGRDSGVQRFTL------HLEHRNPPASQLVVGLLSAERDPAM 307 Query: 322 IINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD-NAPRPGSEQLMTVMDTL 380 ++ L+ + + + + LFD+ EQL L Sbjct: 308 LLELTRGRLEQLQLP-APVLALRLEARELPAFAPQHRQLFDERPQQSLPWEQLRE---RL 363 Query: 381 NAKEGRGTLY----FAGQGIQQQWQMKRAMLSP 409 A+ G + A +Q WQ + +P Sbjct: 364 RARLGDEAVQGLGVRADHRPEQSWQAESDRRTP 396 >UniRef50_Q0V979 Zgc:136881 n=6 Tax=Eumetazoa RepID=Q0V979_DANRE Length = 294 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 53/289 (18%), Positives = 91/289 (31%), Gaps = 76/289 (26%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E +P+L KP VV G +IA + EA+A GV Sbjct: 8 VVALVDMDCFYVQVEQRLKPELKNKPCVVAQYKTWKGGGIIAVSYEARAHGVGRNMFADD 67 Query: 58 QKDLFRRCGVVCFS----------------------SNYELYADMS--NRVMSTLEELSP 93 + L V S + + S M + Sbjct: 68 ARKLCPDLQVARVPEAHGKADLTHYREASVEVIEVMSRFAVIERASIDEAYMDLTASVQE 127 Query: 94 RVEIYSIDEA----------------------------------FCDLTGVRNCRDLTDF 119 R++ S+ + + DL D Sbjct: 128 RLKNTSVQDITAQQLKNTHIQGFPTQQENTHLDRDAQRAAGLQQWLDLLSSSTESSPADL 187 Query: 120 --------GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 ++RA V + T GI+ K LAKLA K ++ + L Sbjct: 188 RLAVGALIVEQMRAAVEEHTGFRCSAGISHNKVLAKLACGLNKPNRQ------TVLPLSS 241 Query: 172 QRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFN 219 +L S LP+ + +G ++ + + + ++ + DL + +HF Sbjct: 242 VPQLFSTLPISKIRNLGGKLGSSITETLSVENMGDLTRFSRAQLEQHFG 290 >UniRef50_B1LUJ0 Putative uncharacterized protein n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LUJ0_METRJ Length = 562 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 61/387 (15%), Positives = 128/387 (33%), Gaps = 26/387 (6%) Query: 26 PVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P+ V + ++A + EA+ALG+++G+P + + + + ++ E D R Sbjct: 15 PLAVAAEGSGGLRLVALDPEARALGLRVGEPLGRVRARI-GVPLQVYPADPEADRDALLR 73 Query: 84 VMSTLEELSPRVEIYSIDEA----FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGI 139 + +P V + EA + D+ G + R A L R+ + + + Sbjct: 74 LCRWASGYAPLVAPFGPGEAADGLYIDVAGASHLRGGEANLVADLAARLARSSVPAAIAL 133 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A T A GG + + + ALPVD + + L +G Sbjct: 134 ADTPGGAFALAR-------HGGGGRVVVPPGGAPEALRALPVDALR-LDPGTVAGLKRLG 185 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 ++ + +L + + F L + + L +R F + I Sbjct: 186 LRRIGELDALPRGPLARRFGAALLLRLDQALARRPEPLAP-LTEAAAYAAARGFLDPIGR 244 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 + + + A A +L + + + AL G S + Sbjct: 245 QADIVRTVRDLMAETAPRLERDGLGACALRLSLHRVDGALRVLDLGLSRPERCPERV--- 301 Query: 320 RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 +++ L + AG ++ + + Q +L +A + + D Sbjct: 302 AALVSLRLDRLGSALDAGFGFETVALAVTVTGPMPARQTDLGAASAADG----VGVLADA 357 Query: 380 LNAKEGRGTLY---FAGQGIQQQWQMK 403 L + GR L A ++ + + Sbjct: 358 LAQRLGRALLRLEPRASHLPERADRSR 384 >UniRef50_Q0G3S1 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G3S1_9RHIZ Length = 494 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 68/383 (17%), Positives = 128/383 (33%), Gaps = 24/383 (6%) Query: 26 PVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P+ + N N V A A+ G+ +G + + F G+ ++ + Sbjct: 3 PIALYQNAANANRVTAVCEMAERQGLAVGTGLSEARARFP--GLETLMADMAADRRLLAA 60 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-FGREIRATVLQRTHLTVGVGIAQT 142 + + +P V + D++G + ++ + + L Sbjct: 61 IADWCDRYTPLVALDPPFGLILDISGCAHLFGGERGLMDDLLMRLFHQGFLAQAAIAGSA 120 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 L AK +GG +R ++ LP+ + + S L +G+KT Sbjct: 121 GAAIALVGVPAKPAIVASGG---------ERAAVAPLPIKVLR-LDPETSGLLSRLGLKT 170 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 V L D + + F L RT+ E G + P Q I R E I Sbjct: 171 VAALLDQPRAGLARRFGKSLVRTLDEATGLARRPISPRRPVPQLIA-ERRLFEPIALEED 229 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + + + + A+R L R + + +N G + V+ PT +R + Sbjct: 230 VARILFALASRLKGDLEERGLGARTLELSLFRVDGVVNRASVGAARPVR--EPTAVAR-L 286 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 + L + AG Y + + + Q +L + L +D + A Sbjct: 287 FREKLKGLGEEFDAGFGYDLVKLAVYETDRLETIQTDLSGEVETNAAFTHL---VDRIGA 343 Query: 383 KEGRGTLYFAGQGIQQQWQMKRA 405 + G T+ + WQ +RA Sbjct: 344 RLGPKTVL--APCRRDSWQPERA 364 >UniRef50_A0LTK7 Putative uncharacterized protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTK7_ACIC1 Length = 527 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 53/386 (13%), Positives = 115/386 (29%), Gaps = 33/386 (8%) Query: 25 KPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRV 84 P V++ +++ + A+A GV+ G W + + ++ +++ + + V Sbjct: 35 TPCAVIARGR--ILSCSPAARAAGVRRGQRWREAQACCPE--LLGHTADPGRDSRVFEAV 90 Query: 85 MSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKT 144 + + E++ ++ G + R+ ++ V VGIA Sbjct: 91 VRRVAEVAAGPDVVRPGLLVARAGGAARYWGGEEPLRQRIVDGVRSLGFPVRVGIADGTF 150 Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVL 204 A A + + R ++ LPV + G +S+ L G++T+ Sbjct: 151 AAVQAAYED-----------RIVPPGRSVDFLAELPVHRL---GPPLSEILPRFGLRTLG 196 Query: 205 DLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 D R + + R RG P L I R F + + Sbjct: 197 DFTSLPRRTVVTRWGEDAGRAHDMARGVPLRFLVRAHDPPV-IAVHRIFDPPLDRVDTAS 255 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 A E+L C + ++ ++ + V + P I++ Sbjct: 256 FIARVAAEELHEQLTRRGLGCLRLVVEVRDESGRIHARAW---RRVDAVLPVFSVAAIVD 312 Query: 325 AATRSLDAIWQAGH---RYQKAGVMLGDFFSQGVAQLNLFD--------DNAPRPGSEQL 373 L +G+ ++ + + L+D + Sbjct: 313 RVRWQLAGWLDSGNVSGGLAALRLVADEVTRAVGWDVPLWDGGNDVLRGQADSIHRHTDI 372 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQ 399 V+ L G + A + Sbjct: 373 ARVLTRLQGLLGESAVVSAVVDGGRD 398 >UniRef50_B2AJW9 Putative DNA polymerase, Y family n=8 Tax=Burkholderiaceae RepID=B2AJW9_CUPTR Length = 488 Score = 131 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 56/375 (14%), Positives = 105/375 (28%), Gaps = 18/375 (4%) Query: 16 TVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 VFRP + V + V A A GVK G + + + F + Sbjct: 16 EVFRPTWSTTELAVAVLDKERVHLATPLALAAGVKPGMRRGGVQTIAPAA--ILFDRDAG 73 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTV 135 D RV + SP V D++ R +Q + Sbjct: 74 KEEDALARVTMATLQFSPNVAAADEAAVLIDVSTTLRLFGGPRKLRRRIMGTVQTMGFST 133 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 VG A T A L G ++ M+ LP+ + R+ + Sbjct: 134 MVGSAPTAQGAWLLART---------GGGTALTTASLQRRMAGLPIHALP-AARKFADWF 183 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 + +G T+ DL +++ + GE ++ E+ + + Sbjct: 184 EGLGCLTLEDLRRLPRAGLQRRCGADFLDALDRAYGEAP-EIFEWVEAPPAFDATVDLPD 242 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 RI + + + L + H + ++ P + + L P Sbjct: 243 RIENAEQTLAYVRGLLVQMVGWLTARHLAIKRFHVALRHERGRAAIPP--TTIEIALAEP 300 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 +I L + V D +LF + Sbjct: 301 NWHEEHLIRILKERLALVVVE-APMIAVAVSAIDTEPMAPPTESLFPEPGGTHADHA--R 357 Query: 376 VMDTLNAKEGRGTLY 390 +++ L+A+ G + Sbjct: 358 LLELLSARLGADRVR 372 >UniRef50_A4TZ00 UmuC protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZ00_9PROT Length = 200 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 1/189 (0%) Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 +L A KQ CSRSF E +T Y + A+ ++A+RAAEK+R++ + F +T Sbjct: 11 RRLTPTAVAKQTTCCSRSFAEAVTLYDHVHDAVLTFASRAAEKIRADGLVAGALQVFAQT 70 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 F ++P + +A V+L T + +I AA L + W+ G+ Y+KAGV+L D + Sbjct: 71 DRFRRDQPQFSLNAMVRLSPATDSTPRLIAAAISGLHSAWRDGYAYKKAGVILIDLVNPA 130 Query: 355 VAQLNLFDDNAPR-PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTT 413 +LF ++ LM +D LN + G+G + + WQM+ SP YT+ Sbjct: 131 NIARDLFSPPPDTGARAQALMNAVDGLNNRMGKGAVGYGLVAKGAPWQMRCGNRSPSYTS 190 Query: 414 RSSDLLRVK 422 DL K Sbjct: 191 DWMDLPVAK 199 >UniRef50_C1E586 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E586_9CHLO Length = 611 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 81/379 (21%), Positives = 122/379 (32%), Gaps = 64/379 (16%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AF+ E P L G P + VIA +A AK GV P + Sbjct: 14 VILHVDADAFFCQVERRRNPALAGCP-ALAVQQHQDVIAADAGAKKAGVTKRTPPADARA 72 Query: 61 LFRRCGVVCFSSN--------YELYADMSNRVMSTLEE------------LSPRVEIYSI 100 L RR G + Y Y S+ + S L VE SI Sbjct: 73 LLRRVGGALVHVHTTTGQRVSYRPYLAASHELHSLLASADLAREVSRDGFNGVAVEKASI 132 Query: 101 DEAFCDL-TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 DEA+ L TG D IR V R + V VG+A K LAKLA +AK R+ Sbjct: 133 DEAYVQLPTGSDLRVDGARCADVIRDVVKARLGIVVSVGVAHNKLLAKLAGASAKPDGRR 192 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIK-TVLDLADTDIRFIRKH 217 + + E L++ P ++ G G ++ K+ A +G+ TV DLA + Sbjct: 193 -----VIVSREDIADLLATTPAHELPGCGGALAAKIRATLGVTATVADLARLPESALVSA 247 Query: 218 F---NVVLERTVRELRGEPCLQLEEFAPT-KQEIICSRS--------------------- 252 GE + + + S Sbjct: 248 LGANPATARLIHARSAGECDDPVRRGRGILNKSVGVHTSLTLTPRAMYGVPGCGVSASGG 307 Query: 253 ---FGERITDYPS------MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA-LNEP 302 E + + +R A R + +E ++ R ++ + N Sbjct: 308 RPGMFEPLRCRETGRLDSLLRAMASDLAGRVMDLAHAEKRWPRTMTVSLILVLGRSENGD 367 Query: 303 YYGNSASVKLLTPTQDSRD 321 S + P +D R Sbjct: 368 GKEVRCSKRGPFPDRDPRV 386 >UniRef50_D2LKT9 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=2 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKT9_RHOVA Length = 180 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 79/174 (45%), Positives = 103/174 (59%), Gaps = 2/174 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N+FY SCE VF P L +PVVVLSNNDGC+IA E+KALG KMGDP+ ++ Sbjct: 3 VFALADCNSFYCSCERVFEPKLETRPVVVLSNNDGCIIALTTESKALGFKMGDPYHLKRA 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 +R V +SSNY LY DMS RVM+ L +P +E+YSIDEAF +L G R LT + Sbjct: 63 DLQRRKVAVYSSNYTLYGDMSRRVMTVLTRFTPELEVYSIDEAFLNLAGF-EGRGLTGYA 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 R IR+TV Q T + V +G+ + L + Q+ + LS Sbjct: 122 RTIRSTVRQETGIPVSIGVNRDPELPRFDTKNC-PVIDQSFEALVLSQRSSAED 174 >UniRef50_D1SIT0 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=3 Tax=Actinomycetales RepID=D1SIT0_9ACTO Length = 557 Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 60/394 (15%), Positives = 115/394 (29%), Gaps = 40/394 (10%) Query: 19 RPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA 78 PVVVL N VIA + A+A G++ G + + + + Sbjct: 25 DGVPATDPVVVLHANR--VIACSERARAEGIRRGLRRREAQGRCPH--LTVVDHDPGRDV 80 Query: 79 DMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE-IRATVLQRTHLTVGV 137 V++ +EE+ VE+ G + E I V Q + Sbjct: 81 RAFEPVVAAVEEVVAGVEVIRPGACATAARGPSRYLGGEEAAAERIVEHVAQSCAVESQA 140 Query: 138 GIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA 197 GIA A LA + + R+ ++A PV+ + ++ L Sbjct: 141 GIADGVFAAGLAAREGR-----------IVAPGGTREFLAARPVEALGR--PALADLLRR 187 Query: 198 MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 +G++T+ + A + F R G L P + + + E + Sbjct: 188 LGVRTLGEFAALPAGDVLARFGFDGALAHRLAGGRDDRPLAVRQPPAD-LTVTADYDEPV 246 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + A A R E+L C + T+ + + + Sbjct: 247 DRVDAAAFAARMLAERLHERLAGYGLACTRLGIEAVTAHGQELHRVWRHDGLLT------ 300 Query: 318 DSRDIINAATRSLD------------AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNA 365 + I + LD + + ++ +Q Q L+ + Sbjct: 301 -AAAIADRVRWQLDGWLSGSNGRGGTRPARPTAGIVRLRLVPDGVLAQAGLQPGLWGETG 359 Query: 366 PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 E+ + + G + A G + Sbjct: 360 --EERERAHRALSRVQGILGPEAVVTAVLGGGRS 391 >UniRef50_D2Q395 Nucleotidyltransferase/DNA polymerase-like protein involved in DNA repair n=2 Tax=Nocardioidaceae RepID=D2Q395_9ACTO Length = 545 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 60/410 (14%), Positives = 124/410 (30%), Gaps = 30/410 (7%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 AS E V P+ VL V+A +A A+A GV+ G + + +V Sbjct: 36 ASAEGV----PPETPLAVLQKGR--VLATSAAARAEGVRRGLRAREAQSRCPE--LVVLK 87 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 + + A + V+S LE L+P +++ G E L+ Sbjct: 88 YDPVVDARAFDPVISCLEALTPGIQVIRPGMCALKARGPSRYYGSEPAAAEKLLDRLETY 147 Query: 132 HLTVG-VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 + VGIA V + + ++ L +D + Sbjct: 148 DVPGSRVGIADGPFA-----AEQAARAASAQTRVRVVPPGGSAEFLAPLSIDTLER--PA 200 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 ++ L +G++++ A + F + RG+ + E+ + Sbjct: 201 LTDLLRRLGLRSLGAFARLPAAEVLARFGPDGAFAHQLARGDDDRPVV-VRQIPPELTRT 259 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 F + + AI + A +L + C + + T ++E + + Sbjct: 260 LDFEPPVDRVDQVAFAIRTVADELIGRLSALGLVCTTLRVEVGTESGRIHEREWLHPR-- 317 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 + T + S A + + ++ G L+ Sbjct: 318 -WFSATDVVDRVRWQLQGSGTATSELTSPVVRLRLIPEQADPVGAHADALWGGGPD---- 372 Query: 371 EQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 E++ + + + G G + + + +R L P D Sbjct: 373 ERIHRALSRVQSMLGHGAVVTPVISGGRGYA-ERQTLVP-----WGDPPT 416 >UniRef50_C1EEZ5 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299 RepID=C1EEZ5_9CHLO Length = 236 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 54/233 (23%), Positives = 81/233 (34%), Gaps = 48/233 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E P+ V +IA N A+ GVK + K Sbjct: 10 VVIHLDLDCFYAQVEAKRLGIDPSVPLAV--QQWSGLIAVNYPARHRGVKRHLNVTEAKK 67 Query: 61 LFRRCGVVC--FSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT---------- 108 L V + Y S RVMS L + VE SIDEA+ D+T Sbjct: 68 LVPELVCVHQSRKVSLRRYRRASWRVMSALADRCEHVERASIDEAYVDVTREVDAAIDGR 127 Query: 109 ----------------------------GVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 IRA VL +T T+ G+A Sbjct: 128 TNAEIDEMVRDGVNASGAVVPLTPSTSEHDMRLAIGAHICAGIRAAVLHQTGFTMSGGVA 187 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 K LAKLA+ K ++ + ++M +LP+ + G+G ++ + Sbjct: 188 HNKMLAKLASARNKPNKQTA------VSARAVTEMMESLPMRSIKGLGGKLGE 234 >UniRef50_C7YPE8 Putative uncharacterized protein n=2 Tax=Nectriaceae RepID=C7YPE8_NECH7 Length = 564 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 58/403 (14%), Positives = 109/403 (27%), Gaps = 98/403 (24%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D + FYA P L PV V C+ N A+ALG+K + K L Sbjct: 22 DYDCFYAQVFENKNPALKKLPVGV--KQKNCLSTCNYNARALGLKKLMSVSEAKRLCPEL 79 Query: 66 GVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNC---------- 113 ++ + + D S + + + S +VE DE F D+T + Sbjct: 80 VLMDGE-DLTPFRDTSKILFNYFKTFSWNHKVERLGFDEVFMDVTDIVEYNLLCLNKASL 138 Query: 114 ---------RDLTDFGREIRATVLQRTHLTVG---------------------------- 136 +D + ++ T Sbjct: 139 ADSFFCLSKQDPERGFQCDLTSIAGCVQDTASQDLDTESPAYLRLLLGSHFAQFLRLQIE 198 Query: 137 --------VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG 188 GIA K L+KL K + T + + + + + G+G Sbjct: 199 EKFGFTSTCGIATNKMLSKLVGGNNKPRNQTTLLALT---QDEAIAFLDDHKLRKIPGLG 255 Query: 189 RRISKKLDAM-GIK----------------TVLDLADTD---IRFIRKHF------NVVL 222 +I + L G TV + I V Sbjct: 256 FKIVEVLGGHVGADMSAAMPEMPEMRDVPVTVGQVRLHPNISPGIIETLLMGPGAEKGVG 315 Query: 223 ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH 282 R L G +++E + +I ++ + + P + + + + ++R + Sbjct: 316 SRIWGLLHGVDPTEVKEASDMPSQISIEDTY-KGLETVPQITEELHKLSCSLVRRMRVDL 374 Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 S + + L + + +A Sbjct: 375 LVPDQNS--------DVPGSQRWIARPKTLRLSVRSWAQLQSA 409 >UniRef50_C6XNZ3 Putative uncharacterized protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ3_HIRBI Length = 511 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 54/402 (13%), Positives = 116/402 (28%), Gaps = 25/402 (6%) Query: 23 WGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADM 80 P V++ V+A N A++ + G + + +V + + Sbjct: 21 KRIPFVLVEKGRHGIEVVAANEAAQSRNIYSGLAFTDARARTPD--LVFEEIDRVADRNA 78 Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 ++ + SPRV D ++TG+ + E LQ + IA Sbjct: 79 LQKLADWMVRFSPRVSTDGNDAIVMEITGLDHLFGGEAKLMERIRACLQTNGYISQIAIA 138 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 T A R G V +S L +++ ++ L V + + + + L G+ Sbjct: 139 GTFGAANALARY-----RINIGDVFVSQLGHEKQDLADLSVKALR-LSDKTVQLLRKFGL 192 Query: 201 KTVLDLADTDIRFIRKHFNVVLER-----TVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 + L D + + + F + + G ++ E S E Sbjct: 193 TRIDQLYGLDRKALTRRFASREAADAVVLRLDQALGIRHEPIKPVIAE-PEWAMRMSCPE 251 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 + + A+ ++ KL R + + + + Sbjct: 252 PVAAQDGVEYALDHLLSQLCHKLDMHGVGARDFCLYAFGVDGKCSHISASS------ASA 305 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 +D+ I ++ I G + L D E + Sbjct: 306 VRDANHIRRLLKEHVETI-NPGFGIDLFMLSAARIEGLDHDAKPLAADMVGGFDEEAFIR 364 Query: 376 VMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 + D L + G + + +R+ ++ T + Sbjct: 365 LADRLAVRLGEKAVQM--PIFHESHVPERSESFSQFATHLME 404 >UniRef50_C9SAM9 Putative uncharacterized protein n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SAM9_VERA1 Length = 609 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 49/356 (13%), Positives = 99/356 (27%), Gaps = 89/356 (25%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D + FYAS P L P+ V + N A+A GV+ + + Sbjct: 63 DYDCFYASVLESQNPALKSLPLGV--KQKSILATCNYVARARGVRKLMRISAARKICPDL 120 Query: 66 GVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDLTGVRNCR--------- 114 VV + + D+S + + L S +VE +DE F D+T + N Sbjct: 121 VVVEGE-DLTPFRDVSKSLYAFLRGHSWSGKVERLGLDEVFMDVTDMINYNMSCLNKLTL 179 Query: 115 ----------DLTD-FGREIRATVLQRTHLTVGVG------------------------- 138 D F ++ + + G Sbjct: 180 ADSFFCLSKTDPEKGFPCDLTKMAGRVHGVPPPAGEQQLENQAYVRLLLGSHLAWYLRTN 239 Query: 139 ------------IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 +A K L+KL K + T + M + + + G Sbjct: 240 IEEKYGFTSACGVATNKLLSKLVGSKKKPRNQTTLLAL---ENGSAVDFMDSYTIRKIPG 296 Query: 187 IGRRISKKLDA--MGIK------------TVLDLADTD---IRFIRKHF------NVVLE 223 IG + ++ L+ + + + + + Sbjct: 297 IGGKTTQLLEKRLLNFHKEIDSYETESALSAQQVRLHPEIYPETLETLLSGPGSEQGIGV 356 Query: 224 RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 R L G ++++ +I ++ + + + + + A ++R Sbjct: 357 RIWNLLHGVDYTEVKDARDVPSQISIEDTYRQ-LDSLVQIEEELKKLAISLLRRMR 411 >UniRef50_C7DDU4 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=5 Tax=Rhodobacteraceae RepID=C7DDU4_9RHOB Length = 522 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 60/385 (15%), Positives = 114/385 (29%), Gaps = 30/385 (7%) Query: 27 VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 + V + V A N A GV G + L V ++ + ++M Sbjct: 50 LAVDGAHGPVVHAANPAAIEAGVHTGARIVDMRSLIPELRVEY--ADVGGDQILLQQLML 107 Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 P + D D TG + D + LTV + +A T+ A Sbjct: 108 WTRRWCPWTSLDGSDGLILDTTGSDHLHDGEALMLADMQARFAQLGLTVRLAVAPTRGAA 167 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 G + E + ALPV + + + L+ +G+KT+ L Sbjct: 168 WGLAR--------YGPERAICPAEDIELRLGALPVKALR-LSDKTDLLLNRLGLKTIGAL 218 Query: 207 ADTDIRFIRKHFNVV-----LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 D + + F + ++ G + + ++ +R E + D Sbjct: 219 TDVPRVALVRRFARTELIHNPVMRLDQMMGRLAEPVNSPEDPPRFMVRAR-LPEPVQDPT 277 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD 321 A +L S R I + + ++ T ++D Sbjct: 278 PHLPA---LCEALCAELSSAGFGARRIVVSVYKTDGDISHV------EAATATGSRDPAH 328 Query: 322 IINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 ++ ++AI G+ + + Q L +L ++D L Sbjct: 329 LLGLFRDRIEAI-NPGYGFDLITLTAAHVEEMADVQSRLGGGTDEG---TELAQLVDRLT 384 Query: 382 AKEGRGTLYFAGQGIQQQWQMKRAM 406 AK G + G + + A Sbjct: 385 AKFGAAHVTRPIPGNSHIPERREAW 409 >UniRef50_D2LC32 Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LC32_RHOVA Length = 648 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 54/419 (12%), Positives = 118/419 (28%), Gaps = 36/419 (8%) Query: 3 ALCDVNAFYASCETVFRPDL--WGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQ 58 + F + + RP L +P+ +L + A + A G+ + P Sbjct: 17 MYVWLPNFAMTLARLKRPRLAKRREPLALLEKHGTVRRIAALDGPAIEAGLYLHQPLADA 76 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD 118 + + +V ++ AD + + +P + D+TG + D Sbjct: 77 LAVCPK--LVTADADPAAEADARAALALWAQRYTPATAPA-PSGLWLDITGCAHLVGDED 133 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAK--------------LANHAAKKWQRQTGGVV 164 + L+ + IA T A A + Sbjct: 134 ELADDLLGRLEARGIPARAAIAPTFGAAFALAHHAERYVIAGDFAAARDAPPPLSRQATL 193 Query: 165 DLSNLERQRKLMSALP-----VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 S+ +R+ + A V+ + I + L +G+ T+ D+ + + F Sbjct: 194 FESDEDRRVEAGLAALLAPLPVERLR-IAPETASVLRKLGLYTIGDVMPLPRASLARRFP 252 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 +L + + G ++ + F E + + + + +L Sbjct: 253 DLLPQL-DKALGRADEAIDFLREPTPWL-ERLRFAEPLAAPEDIERVTRALLDMLCRRLE 310 Query: 280 SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 E + + +V P +D ++ L + G Sbjct: 311 RERHGGLTFEVSFFRADGGVEGQ------TVTTALPCRDQARVMRLFREKL-PLIDPGFG 363 Query: 340 YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 A + Q N+ E L ++D + ++ G G +Y Sbjct: 364 IDSAMIFASRVEPLEARQSNILRKVQGEASLEDLAALIDGIESRFGEGRVYRFAPRESH 422 >UniRef50_C9SHT7 DNA polymerase IV n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SHT7_VERA1 Length = 563 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 8/162 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+L KPVV+ + + + N ++ GVK G K Sbjct: 25 ILHVDFDSFFCAVSLKKHPELVDKPVVIAHSPGHGSEIASCNYPSRKFGVKNGMWMKKAV 84 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 +L + ++ Y + S + + V+ S+DEA D++ DL Sbjct: 85 ELCPE--LKVLPYDFPAYEEASALFYEAILTVGGIVQSVSVDEALLDVSAALRPGDLRGL 142 Query: 120 GREIRATVLQRTHLTVGVG----IAQTKTLAKLANHAAKKWQ 157 G ++ +T T G +A A A ++ Sbjct: 143 GAQMTKLEPIKTGPTAVDGSQKRLAFPTFSAATAAKKSRTDP 184 >UniRef50_C4DV05 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DV05_9ACTO Length = 505 Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 55/387 (14%), Positives = 103/387 (26%), Gaps = 30/387 (7%) Query: 16 TVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 + PV V+ + V A +A A+ GV++G + ++ + E Sbjct: 17 CRSQGLDETDPVAVVIAHR--VSACSATARRTGVEVGMRRRDAAAVCPDLRLLAADPDAE 74 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE-IRATVLQRTHLT 134 A V++ LEEL P V++ G + E I + Q L Sbjct: 75 --AAGFEPVIAALEELVPAVQVLRPGWCGLPAKGPSGWYGDEEAAAETIVEYIAQLCDLE 132 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 VGIA A +A + + + ++ + + G+ + + Sbjct: 133 ARVGIADGFWPASVAAVSGA-----------IVPTGHNAQFLADRNIGLL-GLPP-LVEL 179 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 L +GI T+ A I + V R RG P + + Sbjct: 180 LRRLGINTLGAFAALPRDAIAERLGTVGLRAHARTRGHDERLPAPRTPPVD-LDVFADYD 238 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 E + + A + A + L + C + T+ +L Sbjct: 239 EPLDRVDTAAFAARTLAEQLRATLAARELACTRLVIEAITAQGTGLR---RVWRHRTVLR 295 Query: 315 PTQDSRDIINAATRSLDAIWQAG--HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 + + LD G + Q L+ Sbjct: 296 ASDVADR----VRWQLDGWLTHGGTGAIVHLRLSPEGIVDASALQDGLWGQMGDGLELAD 351 Query: 373 LMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + G + + Sbjct: 352 GSAT--KVQDLFGPEAVLHPVPQGGRN 376 >UniRef50_D1ZXB0 C-terminus not complete (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZXB0_SORMA Length = 299 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 76/170 (44%), Positives = 105/170 (61%) Query: 14 CETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 VF P L KP++VLSN DGC IAR+ EAKAL +KMG P FK +D+ R G+ SS+ Sbjct: 130 ASRVFDPSLRDKPLIVLSNGDGCAIARSEEAKALHIKMGAPMFKIRDIVREHGIQYRSSS 189 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 YELYADM+ R L E S VE+YSIDE+F L + N + A V + T L Sbjct: 190 YELYADMNRRFNQVLAEHSCTVEVYSIDESFFRLPVLPNGLGDVAAAHRVIAAVKRATGL 249 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 + +G+ T+TL+K+AN AK ++ GVVDL ++E +R+L + PV++ Sbjct: 250 PIRIGLGPTRTLSKVANALAKASEKVWKGVVDLHDIELRRRLFAQWPVEE 299 >UniRef50_C4JRK3 Putative uncharacterized protein n=3 Tax=Onygenales RepID=C4JRK3_UNCRE Length = 599 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 53/356 (14%), Positives = 104/356 (29%), Gaps = 84/356 (23%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D + FYAS P L P+ V V+ N EA+ G++ + K + Sbjct: 19 DYDCFYASVFEAENPALKSLPLAV--QQKQIVVTCNYEARRRGLRKLQLIKEAKRICPDV 76 Query: 66 GVVCFSSNYELYADMSNRVMSTLEE--LSPRVEIYSIDEA-------------------- 103 V+ + + D S + + L++ RVE DE Sbjct: 77 -VIMLGEDLTKFRDASKELHAFLKKNTWGNRVEKLGFDELLNRHDLQNSFFQLDKFDPTV 135 Query: 104 --------FCDLTGVRN--------------------CRDLTDFGREIRATVLQRTHLTV 135 FC T R + +R + Q T T Sbjct: 136 GFAFDASTFCGPTYPAEPCPSVKEDGEQLWFSSLDVGLRLGSHLANYLRHQLEQHTPYTA 195 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE----RQRKLMSALPVDDVWGIGRRI 191 VGI+ +K LAKL + K + T + + + + + GIG ++ Sbjct: 196 TVGISTSKLLAKLVGNLNKPRLQTTLRPPYSATDDGQGGNVASFLGQHEIGKIPGIGFKM 255 Query: 192 SKKLDAM--------------------GIKTVLDLADTDIRFIRKHFN------VVLERT 225 + ++ + V + + F + + Sbjct: 256 AHRIRTHILGREPNLDVYEGLAEEDNVSVDVVRSFPGMGPVKLDEIFRGGGWPKDIGTKV 315 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 L G ++ +I S+ + + + S+R + + ++ ++ Sbjct: 316 WGLLNGVDDTEVAVGKAFPSQISIEDSYSQ-VDNLQSVRNELLPLTRKLLRRMHAD 370 >UniRef50_B4DB63 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB63_9BACT Length = 501 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 62/399 (15%), Positives = 122/399 (30%), Gaps = 26/399 (6%) Query: 10 FYASCETVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 F F + W +PV + G V+ A GV G + + Sbjct: 12 FSLQAALRFHEEAWRQPVAITDGDTEKGRVLETTIPAAHSGVWPGMVVTQALARCPSLRL 71 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATV 127 + S +S ++ T LSP +E + DL ++ C D + R + Sbjct: 72 LQRSR--TQEEVVSALLLETTGTLSPLIEATAEGLCVADLRQMKAC-DWEPWARGVVERF 128 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI 187 R L V VG+A LA LA A+ + + + ++ VD G+ Sbjct: 129 ATR-QLRVQVGLAANPDLAILAARHAEPA-------LVVQHAGAFLAGVAVTAVDAAPGL 180 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 + L GI ++ +LA + + + G +L P + Sbjct: 181 ----LEILRDWGIGSLGELARLPRSELIERLGPEAGALWEQAAGRAHRELRLVRPPEV-F 235 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF--ALNEPYYG 305 + F I + + + +L ++ ++ I P + Sbjct: 236 WEAFEFEHPIETTEPLLFILRRQLEQLMLRLEEAYRVAAQMTLTIPLEPGPSNVTAGTDR 295 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNA 365 + + +PT D+ + L+ + + + +Q LF+ Sbjct: 296 YERTFTIPSPTTDTEVLFRILHTHLENLRLEQQPIGV--RLRVEPVVANRSQFQLFESPL 353 Query: 366 PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 P + + + A G + ++ Q R Sbjct: 354 RDPN--RFGETLGRIAALVGAENV--GVVQLEDTHQPDR 388 >UniRef50_A0Z5A6 Aspartate decarboxylase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z5A6_9GAMM Length = 479 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 55/370 (14%), Positives = 119/370 (32%), Gaps = 17/370 (4%) Query: 20 PDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYAD 79 P P VV+ VIA N EA+ G+K G + L + + Sbjct: 18 PLQQDYPAVVIERQR--VIAVNDEAQLTGLKPGQSTATVRALVDTSQLQLLERDASQEVL 75 Query: 80 MSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGI 139 R+ ++P +E + + ++ + L++ TV G+ Sbjct: 76 ALERLECWAYSITPTLERWQNEGLQLEVGRCLKLYGGLTKLFNNIQSDLEQRGFTVRSGL 135 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A ++ A L +H + + + + E L+ K L+ G Sbjct: 136 APNRSAAWLLSHWDENFLYPSDQNLRQRLDEIPLHLLRKAQAGQFLN----AIKSLEKTG 191 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 I+T+ ++ + + + ++ + ++ ++F P + FG I + Sbjct: 192 IQTLGEILNMPASALGRRCGQAFQKWLGDVTATSDNVTQDFHPPHRFY-DCLWFGFEIRN 250 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 + + A R+ I + L + V+ D Sbjct: 251 QTELHPTMQQLLHALARFCRTTQHQPTHIEWQM------LRMHGDTDLFEVRSSEAHDDP 304 Query: 320 RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 + SL+ + G + + + F +Q +LF ++ E L ++D Sbjct: 305 EIWFELSRLSLEQ-YSLGADIEGLALHVHQFQTQNAIVTDLFGES---HNREPLHNLVDR 360 Query: 380 LNAKEGRGTL 389 L ++ G + Sbjct: 361 LRSRLGLQAI 370 >UniRef50_Q1LFT0 Putative uncharacterized protein n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFT0_RALME Length = 527 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 114/386 (29%), Gaps = 17/386 (4%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 PV V+ + + N A ALGV+ G + L VV + + + Sbjct: 31 PVAVIEHERVVL--ANGPAVALGVRYGMRRGGVQAL--SADVVQLDRDLAAESALMTSAA 86 Query: 86 STLEELSPRVEIYSIDEA---FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 L +P V I + EA D+T +++ +G T Sbjct: 87 LALLHFTPAVAIDAEPEAATVMLDVTASLRLFGGHRALCRAIRARVRQLGTFAQIGSGTT 146 Query: 143 KTLAKLANH--AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 A K + R +L+ LPV+ + + + L+ +G Sbjct: 147 AQGAAWLARQPLRKTSRGIVRPARRAVRAARMTRLLDRLPVECLHTL--ADPEWLEGIGC 204 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 +T+ + + + L + + G+ F R+ Sbjct: 205 RTLGQVRRLPRAGLSRRIGTELLARLDQAYGQISSGFAWFEAP-PAFAQRMELPGRVESA 263 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSR 320 + + L + ++ + L E ++L P++D Sbjct: 264 EGVLAGAQRLLLALSGWLAVQQAGVTRCVLMLEHERYRLGEDTDSTPVPLRLAQPSRDPV 323 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + LD I + + + +LF + P L ++DTL Sbjct: 324 HLSKLLREKLDKI-RFHAPVGGLALRVEAMEICVPQSDSLFPEPGAEPAE--LGRLLDTL 380 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAM 406 A+ GR + Q + +RA Sbjct: 381 VARLGRDNVLQ--PHPQADHRPERAN 404 >UniRef50_A1SHX1 Putative DNA-directed DNA polymerase n=1 Tax=Nocardioides sp. JS614 RepID=A1SHX1_NOCSJ Length = 520 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 59/395 (14%), Positives = 107/395 (27%), Gaps = 26/395 (6%) Query: 18 FRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELY 77 P V S N V A NA A+A GV+ G + V + + Sbjct: 20 DEGLPTHLPAAVFSAN--IVQACNAGARAFGVRRGMRRRDAQGRCPELKVYAAIPDRD-- 75 Query: 78 ADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL-TVG 136 A V++ +EEL P V G + A L + Sbjct: 76 ARAFEPVLAAVEELRPGVAPLRPGLVALRAPG--RFYGGEPAAAALVAERLVGLGVWDCR 133 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI--GRRISKK 194 VG+A A+ A A + + LPV+ + + GR Sbjct: 134 VGVADELFTAEQAARRAAP------QDCFVVEPGESVPFLRGLPVEVIEDLPDGRDAVSL 187 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 L +G++T+ L D +R F + R + G +L E+ C F Sbjct: 188 LKRLGLRTLGQLGDLAAADVRDRFGRQVAWVHRVV-GGDGAELLATRIPPPELACHVDFE 246 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 + ++ ++ A R L +H C + + + Sbjct: 247 PPLDSAETIGFSVRQTADRFVAGLARQHLVCTEVRIEAR-CEGEAEPSCSRVWLHPRWFG 305 Query: 315 PTQDSRDIINAATRSLDAIWQAG----HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 + + + G + V L+ Sbjct: 306 AADLVDRLHWQLQGARSGVPGRGGQVRAPVDRVVFEPVTVVPDAVHADGLWGGTE----- 360 Query: 371 EQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 E++ + + G + + ++A Sbjct: 361 ERVERGIARVQGLLGHEAVVRPVLQGGRCPGDRQA 395 >UniRef50_C7CFB9 Putative DNA-directed DNA polymerase n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CFB9_METED Length = 398 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 80/200 (40%), Positives = 114/200 (57%), Gaps = 1/200 (0%) Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 R++R TV RT ++ VGI TKTLAKLANH AKK GGV DL++ + Sbjct: 14 GPVTLCRDMRETVRARTGISTCVGIGATKTLAKLANHVAKKVPE-LGGVCDLTDPIQYGH 72 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 M+ +P +D+WGIG ++KL+A+G ++V D+ D D R +RK VV ER V+ELRG C Sbjct: 73 WMARIPPEDIWGIGPANARKLEALGCESVADVRDLDTRAVRKAMTVVGERLVQELRGLAC 132 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 L LEE A ++ +RSF + + D +M QA+ ++AA+ EKLR ++ F T Sbjct: 133 LDLEEVASARKGCAVTRSFSDGVEDLATMEQAVATHAAQLGEKLRGGGLATDHVTVFFHT 192 Query: 295 SPFALNEPYYGNSASVKLLT 314 S + P S+ V L Sbjct: 193 SEHERDRPQRSVSSVVTLAR 212 >UniRef50_D0XS46 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=3 Tax=Alphaproteobacteria RepID=D0XS46_9CAUL Length = 476 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 113/371 (30%), Gaps = 29/371 (7%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV 95 + A + A LG+ G + + + + E A + RV+ +P + Sbjct: 10 RLAAVDPAAARLGLSPGMTLADARARTPD--LRTVADDPEADATLLRRVLKDFGRFTPLI 67 Query: 96 EIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 + D+TG + L++ +A T A+ Sbjct: 68 ALDPPHGLMLDITGCAHLFGDEAGLIRSAQRRATGGGLSLRWALADTPQSARALARFG-P 126 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 G R + L V + + + L G+K + DL D + Sbjct: 127 GGLFAGP--------ETRTAVRRLSVAAL-ELAEPDERALRRAGLKRLSDLDDRPRAPMA 177 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 F + + G+ +++ P + R E I + + A A Sbjct: 178 ARFGTDFPARLARVLGDEDVRITPHRPVPACV-VDRILVEPIVTQDDVERVFQDLLADAV 236 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI-- 333 ++L Q R F + S++ P++D + L A+ Sbjct: 237 DQLDQRGQGGRAFEVFFYRLDGHVRRV------SIRTGQPSRDPAALQRLFRERLGALAH 290 Query: 334 -WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY-- 390 G + + + + Q ++ + RPG+E + ++D L A+ G + Sbjct: 291 PLDPGFGFDQMRLAVPWTEPIAPTQDSMEGE---RPGTEHVSHLIDRLAARLGPDAVLCF 347 Query: 391 --FAGQGIQQQ 399 F ++ Sbjct: 348 QPFGSHMPERA 358 >UniRef50_D1UT44 Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UT44_9BURK Length = 599 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 108/368 (29%), Gaps = 13/368 (3%) Query: 44 AKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEA 103 A GV+ G L + +++ + L +P++ + Sbjct: 69 ALRAGVQPGHSRSYALALAPELKL--LTADAGREIQAFEAIALALLTYTPKLSLADTHTL 126 Query: 104 FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV 163 ++ + + T V A T A A A+ + G Sbjct: 127 LLEVGSGLRLFGGLRTLLARVSATVAEFGYTARVACAPT---AWGAWLLAQARANRQGRR 183 Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 + + +++ LPV + + +G T+ +L + + F + Sbjct: 184 WHVVKEDSLARVLDRLPVSLLP-VAPTYRDAFAHLGCATLAELRRLPRAGVVRRFGSGIL 242 Query: 224 RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 + + G E F R+ + ++ A + A L + H Sbjct: 243 DLLAQAYGTRPDPRESFRAPA-SFHAQLELPSRVDNADALLFAARRLIVQLAGWLSAHHA 301 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 + ++ + + P +S V P++D+ +I L+ A + Sbjct: 302 ALSGYTLLLEHELASRHSP-KTSSLRVAWAVPSRDAEHLIWLLREKLNQTVLA-APVIEL 359 Query: 344 GVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 ++ LF E + +++ L+A+ G + + + Sbjct: 360 KLVADQIAEYAGQSDTLFPMPESDG--ESIARLLERLSARLGPENVLQMSVQDDHR--PE 415 Query: 404 RAMLSPRY 411 RAM Y Sbjct: 416 RAMRVEAY 423 >UniRef50_Q9GNC0 DNA polymerase eta n=10 Tax=Drosophila RepID=Q9GNC0_DROME Length = 885 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 72/462 (15%), Positives = 141/462 (30%), Gaps = 99/462 (21%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + L D++ F+ E P+ +P+ V+ G +IA N A+A GV + Sbjct: 17 VVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQYNPWRGGGIIAVNYAARAKGVTRHMRGDE 76 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 KDL + ++ Y D V + L+ + +E S+DEA+ D+T N Sbjct: 77 AKDLCPEIVLCQVPNIREKADTSKYRDAGKEVANVLQRFTQLLERASVDEAYLDITETVN 136 Query: 113 ----CRDLTDFGREIRATVLQ-RTHLTVGVGIAQTKTLAKLAN---HAAKKWQRQTGGVV 164 F + + V +G K + AN + + Sbjct: 137 HRMQQMQSGAFALQPQELVNTFAVGYP-SIGDYVNKITNRFANPYMDDERYQMSYDQNDL 195 Query: 165 DLSNLERQRKLMSALPVDDVW-------------GIGR-----RISKKLDAMGIKTVLDL 206 R L+ A +V GI +++ ++ +T+L L Sbjct: 196 PAVRQSDIRLLIGASVAGEVRAAVKKETGYECSAGIAHNKILAKLAAGMNKPNKQTILPL 255 Query: 207 ADTD------------------------------IRFIRKHFNVVLERTVRELRG----- 231 +T + + K V L+R E G Sbjct: 256 TETASLFDSLPVGKIKGLGGKFGEVVCETLGIKFMGQVVKFSEVDLQRKFDEKNGTWLFN 315 Query: 232 ----EPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEKLRSE---- 281 + + I C + F R IT +++ + ++ ++L + Sbjct: 316 ISRGIDLEAVTPRFY-SKSIGCCKKFPGRNNITGLKTLQHWLGELSSEINDRLEKDFIEN 374 Query: 282 HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA----IWQAG 337 ++ + + ++ +S S L D I+ + + A + G Sbjct: 375 NRRAKHMVVQYVQD---IDGEEVASSRSTALRDY--DQESIVRLSLDLIKANTKTFLRPG 429 Query: 338 HR------YQKAGVMLGDFF---SQGVAQLNLFDDNAPRPGS 370 + G+ +G F S +F + A + Sbjct: 430 SESALNNAIKFLGISVGKFETVSSGQNKLQEMFANQAAKKRR 471 >UniRef50_A2WV83 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2WV83_ORYSI Length = 498 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 15/189 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E P+L G+P V+ ND G +IA + EA+ GVK + Sbjct: 13 VIAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K + +V ++ +Y + V++ L + E SIDE + DLT Sbjct: 73 AKMVCPSINLVQVPVARDKADLNVYRSAGSEVVAILSTKG-KCERASIDEVYLDLTDAAK 131 Query: 113 ---CRDLTDFGREIRATVLQ--RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + I + L + + + L + ++ Sbjct: 132 EMLLESPPELLELIFEEATKSNILGLPSVIFVLHDLIVVSLQFDMNVTNRASYVQD-VIN 190 Query: 168 NLERQRKLM 176 + R + Sbjct: 191 REDSVRAWL 199 Score = 95.6 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 9/140 (6%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++R VL+ T T GIA K LAKL + K Q+ + + + + Sbjct: 217 IVAQLRVKVLEETQFTCSAGIAHNKMLAKLVSGMHKPAQQ------TVVPSSAVQDFLVS 270 Query: 179 LPVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQ 236 LP+ + +G ++ L +G+ TV DL +++++ V + RG + Sbjct: 271 LPIKKMKQLGGKLGSSLQDDLGVNTVGDLLSFTEDKLQEYYGVNTGTWLWKIARGISGEE 330 Query: 237 LEEFAPTKQEIICSRSFGER 256 +E+ + C ++F Sbjct: 331 VEDRLLP-KSHGCGKTFPGP 349 >UniRef50_D1X5H2 DNA-directed DNA polymerase n=1 Tax=Streptomyces sp. ACT-1 RepID=D1X5H2_9ACTO Length = 337 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 53/321 (16%), Positives = 105/321 (32%), Gaps = 16/321 (4%) Query: 83 RVMSTLEELSPRVEIYSIDE-AFCDLTGVRNC--RDLTDFGREIRATVLQRTHLTVGVGI 139 ++++ L+ +S RVE D A+ DLTG RD +R +L + G Sbjct: 29 QLLAVLDSISSRVEPLPADWSAYVDLTGALTYWGRDAEGLVAVLRLRLLALHGVQCSAGA 88 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 T+++A +A G + + P + GIG R ++ L G Sbjct: 89 GPTRSIAAMAADVTPPGAATVVG----HDPYEVSAFLRTRPASALPGIGPRTARTLARYG 144 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERT-VRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 I +V D+ADT + +++ R + A + + S F Sbjct: 145 ITSVGDIADTQLPTLQRILGASAARLAHDRAHNIDERPVVPGAAP-RTVSASHRFDRDEL 203 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 D +A+ +LR+ + R ++ + + + + L PT Sbjct: 204 DTERHHRAVLGLVQDLGSRLRTGREIARALTLTVTYAD------RSQTARTRALAEPTAH 257 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 + + A L + R + + L + ++ +D Sbjct: 258 TPALAATARALLTGLGLQRARVRALALRAERLRPAEDTVHQL-TLDDRDDRLRRIEAALD 316 Query: 379 TLNAKEGRGTLYFAGQGIQQQ 399 + G G A ++ + Sbjct: 317 QAATRYGTGVAGAASTFLRAR 337 >UniRef50_A9CXS2 Putative nucleotidyltransferase protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CXS2_9RHIZ Length = 562 Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats. Identities = 54/390 (13%), Positives = 116/390 (29%), Gaps = 33/390 (8%) Query: 16 TVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 + +P+VV ++A ++ A+A G++ G + L + C ++ Sbjct: 41 RISDAHPETQPLVVTGTVKNAIRILALDSRARAHGIRKGQSLSDARALV--HDLDCHQAD 98 Query: 74 YELYADMSNRVMSTLEELSPRVE------------IYSIDEAFCDLTGVRNCRDLTDFGR 121 + R+ S E +P V + F D+TG + Sbjct: 99 ADADHAALLRIASWCERYTPLVGLGANPDAERETGVGGDHGLFMDITGCAHLMGGEAALV 158 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 L + +A T A G + + + + + L + Sbjct: 159 ADLEARLLAQGFHARLCLADTPGAAWAMAR---------HGAARIISEDSHGEAILPLSL 209 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 + + + L +G+KT+ + + F L + + + G + Sbjct: 210 SGLR-LQPALVASLGRVGLKTIGCITSLPRAPLAARFGAGLMQRLDQALGRETEAISPLM 268 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 P E+ R F + +T + ++ I + AA E L R + + Sbjct: 269 PVA-ELSTERRFADPVTHHDAVTHVISALAAAMIEPLERRGLGIRRCRLRLFRVDGHVAA 327 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 + ++ + L AG + + + AQ ++ Sbjct: 328 LEVQTARPLRDARMI---ERLFAERLAGLHEDLDAGFGFDLIRLDILHADPFEAAQGDMV 384 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 G + L +D L A+ G + Sbjct: 385 AGGRASEGHDAL---VDRLGARLGLDRVQR 411 >UniRef50_B2T2I7 Putative uncharacterized protein n=3 Tax=Burkholderia RepID=B2T2I7_BURPP Length = 593 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 47/368 (12%), Positives = 106/368 (28%), Gaps = 13/368 (3%) Query: 44 AKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEA 103 A GV G L + +++ + L +P+V + Sbjct: 69 ALRAGVHAGHSRSYALALAPGLEL--LAADTARETQAFEAIALALLTYTPKVSLTEAHTL 126 Query: 104 FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV 163 ++ + + T + A T A A A+ + Sbjct: 127 LLEVGSGLRLFGGLRALLSRVSATVAEFGYTARIACAPT---AWGAWLLAQARAVRQKNR 183 Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 + +++ L V + + + L +G T+ DL + + F + Sbjct: 184 WHVIKETSLARVLDGLSVSLLP-VTQAHRDALAHVGCTTLADLRQLPRSGVVRRFGSGIL 242 Query: 224 RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 + + G E F R+ + ++ A + A L + H Sbjct: 243 DLLAQAYGTRPDPRESFRAPA-SFHAQLELPSRVDNADALLFAARRLIVQLAGWLSAHHA 301 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 + ++ + + P +S V P++D+ +I L+ A + Sbjct: 302 ALSGYTLLLEHELASRHAPT-TSSLKVAWAIPSRDAEHLIWLLREKLNQTVLA-APVIEL 359 Query: 344 GVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 ++ LF + + +++ L+A+ G + + + Sbjct: 360 KLVADQIGEYAGQSDTLFPMPESDG--DSIARLLERLSARLGPENVLQMSVQDDHR--PE 415 Query: 404 RAMLSPRY 411 RAM Y Sbjct: 416 RAMRVEAY 423 >UniRef50_Q1N9P2 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9P2_9SPHN Length = 538 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 69/391 (17%), Positives = 119/391 (30%), Gaps = 32/391 (8%) Query: 16 TVFRPDLWGK---PVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 V RPDLW P VV+ + +A+ A+G+ G + + F Sbjct: 28 RVARPDLWAAGEGPAVVVDMVRGAMRLGCIDADGLAIGLMPGMTLADARAREPD--LRVF 85 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 ++ D R+ +P ID D++G + D L+R Sbjct: 86 ETDPHADQDWLERLCDGCARYTPNAAPDGIDGLMLDISGCGHLWGGDDALAADAVERLER 145 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 L V +A + A + + LPV+ + G+ Sbjct: 146 HGLRVRHALASSPEAAHALARFPGP------------PAPDEDAAVRRLPVEAL-GLDPD 192 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 + L G++TV DLA I F + L G L + I Sbjct: 193 SAVALRRAGLRTVGDLAARPAAPIAARFGEEAIDALDALLGRGHRPLAPR-RPRAAIRID 251 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 R F E I + + AA+A ++L + R S S Sbjct: 252 RRFAEPIGSTAYALKILEDMAAQAGDRLAERGEGGRRFEAIFFRSDGLAFPLRVETS--- 308 Query: 311 KLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 P +D+ I+ +DA+ G + + + QL L + Sbjct: 309 ---LPIRDAPAILRLMRERIDALSDPIDPGFGFDMLRLTVPQAEKLAPTQLAL--EGGEA 363 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + + ++D L+ + GR + Sbjct: 364 RREDSVAALVDRLSIRAGRARIQRLAPRDSH 394 >UniRef50_UPI00019102E2 DNA polymerase IV n=4 Tax=cellular organisms RepID=UPI00019102E2 Length = 109 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 4/108 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+A+ E P L P+ + + G + N A+ GV+ P Sbjct: 4 IIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARQFGVRSAMPTAMAL 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 L + ++ Y + S V + +E S+DEA+ D+ Sbjct: 64 KLCPHLTL--LPGRFDAYKEASRHVRDIFSRYTSLIEPLSLDEAWLDV 109 >UniRef50_B8H428 Protein imuB n=6 Tax=Alphaproteobacteria RepID=IMUB_CAUCN Length = 458 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 56/351 (15%), Positives = 100/351 (28%), Gaps = 20/351 (5%) Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 G+ G L +V + + SP V I D F D+ Sbjct: 2 GLFPGQKAADALALVPD--LVTADHDPAADRAALEALCDWCVRFSPAVAIDGDDGLFLDI 59 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 TG + + L R + IA T A G + ++ Sbjct: 60 TGTDHLWGGEAAMLVDLVSRLARWGVPARAAIADTAGAAWALARF--------GPDLAIA 111 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 Q ++ LPV + +G +L +G+ V + + K F + + Sbjct: 112 PPGEQTAAIATLPVAALR-LGDAAEAQLPRLGLHRVGQVLALPRAQLAKRFGLAAVLRLD 170 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 + G L P +F E I+ + + A +L +E + + Sbjct: 171 QALGAASEALTFRRPASPWF-DRLAFFEPISAPEDLARVAADALALICARLEAEGRGAKR 229 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 G + + D++ + LD + G + V Sbjct: 230 FEVVFHRLDGRAFPVRVGLARIGR------DAQRLARLVKPKLD-MVDPGFGIEVVTVHA 282 Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 AQ L D +A E L ++D L + G ++ A Sbjct: 283 FAVEPMAAAQARL-DADAAASADETLAPLIDRLVNRLGENRVWRADPFESH 332 >UniRef50_B9NI90 Predicted protein n=36 Tax=cellular organisms RepID=B9NI90_POPTR Length = 628 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 77/221 (34%), Gaps = 18/221 (8%) Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 LAK+ + K + + + L V GIG + ++KL A+GI+T Sbjct: 1 MLLAKIGSELDKPDG------LTILTPADIPTRIWPLAARKVNGIGPKAAEKLAAIGIET 54 Query: 203 VLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT--- 258 V LA+ DI ++ HF G Q+ + + + +F + Sbjct: 55 VGQLAEADIALLQAHFGRNYASWLAEVANGRDERQVV-VSSEPKSMSRETTFERDLHPRG 113 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 D P + + R AE LR + R + ++ F + + + L T D Sbjct: 114 DRPVLSEQFTRLCMRVAEDLRRKGYVGRTVGIKLRFDDF------HTVTRDLTLTAHTAD 167 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 I + AT L I R + GV + + Sbjct: 168 GATIRHGATECLKRIPLE-RRIRLLGVRVSALIPAADQGDD 207 >UniRef50_A5FTH4 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=31 Tax=Alphaproteobacteria RepID=A5FTH4_ACICJ Length = 522 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 58/378 (15%), Positives = 116/378 (30%), Gaps = 24/378 (6%) Query: 20 PDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELY 77 P P+++ N V A N A+ LG+++G + + L G+ + Sbjct: 40 PPSPETPLILADRDGNRRIVFAANGVAQDLGLRIGMAVAQAQALIP--GLTIRDAEPLAD 97 Query: 78 ADMSNRVMST-LEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVG 136 R+ L +P V D D TG + R L +T Sbjct: 98 VAGLERLALWALHRYAPIVAADPPDGLVIDATGAAHLRGGEAQMLRDMIARLAAAGVTAR 157 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 +A + A V ++ ++ R ++ LP+ + + + L Sbjct: 158 AAMADSWGAAHALAR-------FLANPVFVALADQSRDILLTLPIAALR-LPTEMITGLR 209 Query: 197 AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 +G + + DLAD + F L R + + G +E I ++F E Sbjct: 210 RLGFERIGDLADQPRAPLALRFGPQLHRRLDQALGTLAEAIEAARSP-DLIEVRQNFAEP 268 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 I ++ + L ++ R + + + V P Sbjct: 269 IGAAETIARYTGILVTELCTMLEAKGLGARQLDLVFHRVD------AHSEAIRVGTALPA 322 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 ++++ + ++ I G + + G QL + + Sbjct: 323 RNAKRLTRLLCDKIETI-DPGFGIEIMALCAARSEPFGPKQLT---SLLADEPETDISDL 378 Query: 377 MDTLNAKEGRGTLYFAGQ 394 +DT+ + G LY Sbjct: 379 IDTIANRVGGDRLYRFAP 396 >UniRef50_Q0UKS6 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UKS6_PHANO Length = 635 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 57/384 (14%), Positives = 105/384 (27%), Gaps = 110/384 (28%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AFYAS P L P+ + V+ N EA+ G+ + K L Sbjct: 17 VIHFDYDAFYASVVENEFPHLKSLPLAI--QQKQIVVTCNYEARRRGLYKLQLISEAKRL 74 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDE--------AFCDLTGVR 111 V+ + + + S + + + S R E DE F D++ + Sbjct: 75 CPDV-VIVLGEDLTRFRNASKELYALVRSFSWNARCERLGFDEVRPPILSQVFMDVSDII 133 Query: 112 NC---------------------------RDLTDFG---------REIRATVLQRTHLT- 134 + D T + ++ L Sbjct: 134 DYNTGVLNSSNLSNSFFCLSKTDPTLGFEFDATRLAGYAFPDALEHTLGKRRVETAGLDE 193 Query: 135 --------VGVG--------------------IAQTKTLAKLANHAAKKWQRQTGGVVDL 166 G I+ K LAKL + K + T Sbjct: 194 NETTLLGNASSGCFTKTLMLLEQEKGYTATVGISTNKLLAKLVGNRHKPNAQTTLLPPYT 253 Query: 167 SNL----ERQRKLMSALPVDDVWGIGRRISKKLDAM------GIKT------------VL 204 S+ + M + + GIG +I++KL I T V Sbjct: 254 SDHTDISDNVTLFMDDHEIGKIPGIGFKIAQKLRTHVLQRPAAIDTGLVYGGTKESVLVR 313 Query: 205 DLADTD---IRFIRKHF------NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 D+ + + + + + R L G ++ + +I S+ Sbjct: 314 DVREYPGLGPELLERLLGGNGAPHGIGARIWELLNGCDSAEVGQARQVPTQISIEDSY-I 372 Query: 256 RITDYPSMRQAICSYAARAAEKLR 279 R+ + + + AA ++ Sbjct: 373 RLDTINEVTKELSMLAASLLTRMH 396 >UniRef50_A5V5C0 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=4 Tax=Alphaproteobacteria RepID=A5V5C0_SPHWW Length = 515 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 65/386 (16%), Positives = 120/386 (31%), Gaps = 34/386 (8%) Query: 19 RPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYEL 76 P ++ C+ A + A ALG+ G + G + Sbjct: 32 NGCPPDAPFALVEKRKGAICLAAVDRAALALGMVPGLSLADARARLPDLG--VADHDPPA 89 Query: 77 YADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVG 136 A R+ + +P V + D D++G + R+ A L R L V Sbjct: 90 DARFLERIADGCDRYTPMVALDPPDGLLLDISGCAHLFGGEGALRDDLAARLGRLGLEVL 149 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL-MSALPVDDVWGIGRRISKKL 195 +A T A E + ALPV+ + G+ + L Sbjct: 150 SALADTPDAAHALARY---------------RPEPVAGATLGALPVEAL-GLDGEETVGL 193 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 G + + DL R + F +R + G +++ P ++ R F E Sbjct: 194 RRAGFRRLDDLEARPSRLLAARFGEAAPDRLRRIAGGRDVRITPRRPE-PALMLERRFAE 252 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 I AI +AA ++ + H+ R + + + ++ P Sbjct: 253 PIGRTEGALAAIGELVGQAAVRMEAAHRGGRRFEAQLFRTDGLVRALR------IETGLP 306 Query: 316 TQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 +D+R ++ L A+ G + + + F QL L + Sbjct: 307 VRDARVVMRLFDERLAALADPVDPGFGFDLVRLSVPMFEPLAPLQLPLEGGA---LAQGE 363 Query: 373 LMTVMDTLNAKEGRGTLYFAGQGIQQ 398 L ++D L+ + GR + Sbjct: 364 LAQLLDRLSTRLGRHRVRRLAPRDSH 389 >UniRef50_C0G3K2 Cytoplasmic protein n=39 Tax=Rhizobiales RepID=C0G3K2_9RHIZ Length = 513 Score = 121 bits (303), Expect = 5e-26, Method: Composition-based stats. Identities = 61/382 (15%), Positives = 112/382 (29%), Gaps = 30/382 (7%) Query: 26 PVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P+VV N + A + EA LG+ G + R V + ++ + R Sbjct: 28 PLVVTERTANALRLTAVDGEAAKLGLFPGMALTDARARVERLDVAAAAPEHDT--ALLKR 85 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + E +P V D+TG + R +R L V IA Sbjct: 86 LAQWCERYTPLVAFDEPHGLMLDITGCAHLFGGPAAMRADALCRFERAGLHVQAAIADNS 145 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 A+L K GGV + +L+ LP+ + + + L G+K + Sbjct: 146 FAARLLARGTK------GGVF---SQAEADRLLPRLPLSAL-ELAQAAETGLKRAGLKRI 195 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 D+ + F L + L + R E +T + Sbjct: 196 GDVMALPRSALTARFGTDLATRLDRLARRERAPISP-LRILPLRTVERRLSEPVTAMELV 254 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII 323 + A +L E + + + ++ P +D R + Sbjct: 255 EHILRELAQALFAQLEMEGKGALLLEASFFRVDGEVRHIR------IETGQPLRDDRIFL 308 Query: 324 NAATRSLDAIWQA---GHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 A L A+ G + + + Q L + ++D L Sbjct: 309 RLARERLGALTDPLDAGFGFDMIRLAALRSSTVAQRQTGL---DQHEEDEAGFSQLIDRL 365 Query: 381 NAKEGRGTLYFAGQGIQQQWQM 402 +A+ G+ + + M Sbjct: 366 SARLGQDRVL---VSFPRDTHM 384 >UniRef50_Q2Y5T6 Putative uncharacterized protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y5T6_NITMU Length = 506 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 64/380 (16%), Positives = 123/380 (32%), Gaps = 20/380 (5%) Query: 14 CETVFRPDLWGKP---VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 E F P+ P V V N C+ N A+A GV G P +F +V Sbjct: 16 VERRF-PE-ALIPAIGVTVRKGNQICIQQANKPAQARGVMEGQPLASALAVFPD--LVIM 71 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 + + + +P + I +++G + V+ Sbjct: 72 EQDSHEEGKALQQAVYAALRFTPNIAI-QNSGLIAEVSGSLKLFGGLKKLCQSLNRVVTA 130 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 L + GIA T T A L +A + G V E R L+ ALPV + Sbjct: 131 QGLQLSAGIAPTATGAWLLARSA------SSGTVINGKGEEFRILLDALPVGFLESAQPH 184 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 + + + +G KT+ DL + + F L + G+ + F + Sbjct: 185 L-EVIRGIGCKTLADLQRLPRSGVARRFGQNLPAELDRAYGDAPDPQKWFEAPEDFQQKM 243 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 + G I + + + L H S + ++L +P+ S ++ Sbjct: 244 KMMG-LIENAGLLLVPAQRMVEQMCGWLALRHAAVSAFSFVLHHE-YSLRQPHKFTSINI 301 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 L + D ++ L+ + + + + + L LF + + Sbjct: 302 HLSEQSSDPAHLMLLLREHLERT-KIVAPVCELELTADEIAAGADGNLELF--PTMQSET 358 Query: 371 EQLMTVMDTLNAKEGRGTLY 390 L ++ +++ G + Sbjct: 359 TSLNRFIEKFSSRLGPEAIT 378 >UniRef50_Q47EP4 Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EP4_DECAR Length = 479 Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 52/378 (13%), Positives = 99/378 (26%), Gaps = 24/378 (6%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 L P V+S V + A+ GV G L G++ F + Sbjct: 18 LRQSPSAVVSRGRVLVG--DLAARLAGVCAGQKLSTALGLQP--GLMVFERDEVREIKAL 73 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQ 141 + +P + + S D ++ E + A Sbjct: 74 ESLACWAGRFTPTISVVSPDVLLLEIGSCLRLFGGAPAIIEAVLAGCAEQSYSTNWAAAP 133 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK 201 T A A + + ++ LP G I +L++ G+K Sbjct: 134 TPLGASWLARNA--------CAGIHIEISAMQAALADLPCAIDEWPGEVI-DRLESFGLK 184 Query: 202 TVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 + DL +R+ + G+ + FA + R+ Sbjct: 185 RLGDLRQLPGAGLRRRIGNQPMDDLLRAWGDLPDPQKPFAFPE-SFAIDLELPARVEHAE 243 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD 321 ++ A A A L R + + S P D Sbjct: 244 ALAFAGQRLFAALAGWLHGRQLLLRCCTLHLAHDDGEKTPLALRFS------EPAADEGR 297 Query: 322 IINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 + L + + + + + A +LF+ A G + ++ L Sbjct: 298 FMRLLREHLARLQL-KAPVEALCLQADELLDKPGASAHLFEQAATGEG---ALACLERLR 353 Query: 382 AKEGRGTLYFAGQGIQQQ 399 A+ G G + + Sbjct: 354 ARLGEGAVQALSLMADHR 371 >UniRef50_B4S261 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S261_ALTMD Length = 484 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 65/367 (17%), Positives = 117/367 (31%), Gaps = 22/367 (5%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 PV V S+ +I N AK G+++G + L V N E M Sbjct: 42 PLSTPVAVYSSKASKIIQCNEVAKKEGIEIGHGLAQAAALCPY--VHILPFNEENEKHML 99 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQ 141 ++ L L+ + + + D L + + + + L ++ A Sbjct: 100 TQLAHRLYPLASDIVLDAPDGLAIRLDNLSHYYGGHEALWKTLTQALFEANVRYHFASAW 159 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK 201 T AK+ K L + ++ + A P+ + ++ + L +GI Sbjct: 160 TIEAAKV-LVLHKHNTY-------LHAQQEIKQALGACPLST-TALASKVIESLTRVGIT 210 Query: 202 TVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 V +L ++ + K F+ + LRGE ++ F P + I + Sbjct: 211 RVHELLAMPVQELGKRFDNNTIVYLTALRGEIFPRVTLFRPLEH-FDNFTLLPFDIENTQ 269 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD 321 + + + LR+ + Y IS I F N S + Sbjct: 270 HLTPFVTQQFEHLSHYLRARNLYTSSISVHIH---FREAPVLDINIRSALPQASVKSWLP 326 Query: 322 IINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 + T +L+ GV F + F D +QL + LN Sbjct: 327 LFTLKTENLE----LPEPATAIGVRCQQFEEIDSNNGDFFSDRFNDVAQKQL---IGRLN 379 Query: 382 AKEGRGT 388 AK G + Sbjct: 380 AKLGDHS 386 >UniRef50_UPI0001874386 polymerase involved in DNA repair n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI0001874386 Length = 554 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 96/302 (31%), Gaps = 23/302 (7%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 AS + P PV ++ ++ V A + A+ GV+ G + L + Sbjct: 25 ASVTSQANPL---SPVAIVGDSG--VAACSPSARRAGVRRGQSRRHAEALCPE--LEVVE 77 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 + A V+ LE ++ VE A GV D E Sbjct: 78 ESAVRDAAEFESVLQRLEVVAAGVEALRPGLAVVAARGVMRYYGGQDVALEKLLDAAAVP 137 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW-----G 186 + +G+A A LA GV+ + ++ + + ++ Sbjct: 138 GVDCSLGLADDIVTAILAARR---------GVLVAPGEDEGKRFRQGISLVELRAESALE 188 Query: 187 IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL-RGEPCLQLEEFAPTKQ 245 + ++K +G++T+ D+A R I F R RGE L P Sbjct: 189 MPAELAKSWQELGLRTLGDVAALPKRDIANRFGAQGARWHDLACRGEVRLVAPRSLPPGL 248 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYG 305 + +S+ + A + E+L + C ++ + S + + Sbjct: 249 AVSY-QSWESPLRRVDEASFVARFLAGQLHEQLFNHGYSCYRLAVVAQFSDGSEVRRVWR 307 Query: 306 NS 307 + Sbjct: 308 CT 309 >UniRef50_Q7PXH4 AGAP001404-PA n=4 Tax=Coelomata RepID=Q7PXH4_ANOGA Length = 881 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 8/117 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY E P + GKP+ V+ G +IA N A+A GV + Sbjct: 16 VVVLVDMDCFYCQVEEKLNPAIRGKPIAVVQYNPWQGGGIIAVNYPARAEGVTRHMRGDE 75 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG 109 K + ++ Y + V L+ +P +E SIDEA+ D+T Sbjct: 76 AKQHCPEIELPQVPQVRGKADLTRYREAGKEVADVLKSFTPLLERASIDEAYLDITE 132 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 92/258 (35%), Gaps = 30/258 (11%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 EIRA V +RT GIA K LAKL K ++ + + KL Sbjct: 202 GASIVNEIRAAVKERTGFECSAGIAHNKILAKLTAGFHKPNKQ------TILPINSIPKL 255 Query: 176 MSALPVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEP 233 LP+ V G+G ++ + + + IK + +L +++HF + RG Sbjct: 256 YETLPLKKVKGLGGKLGDQVCEVLKIKFMSELVQFPESVLQQHFEQRMGSWMYLMARGID 315 Query: 234 CLQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSE----HQYCRF 287 + + I C + F IT ++ + A+ E+L + ++ + Sbjct: 316 LEAVTAKFH-SKSIGCCKRFPGKNAITGLATLHHWLNELASEVTERLEKDLDENNRTAKQ 374 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA----------G 337 ++ ++ ++ S+ L+ D+ I A ++ + Sbjct: 375 LTVSY---SQQIDNVDVSSTRSIALVAY--DAERIAADALDAIKRNTERFFASNSTTALH 429 Query: 338 HRYQKAGVMLGDFFSQGV 355 + + G+ G F G Sbjct: 430 NPIKFLGISAGKFEPNGA 447 >UniRef50_B5GWK1 Putative uncharacterized protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GWK1_STRCL Length = 333 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 111/303 (36%), Gaps = 19/303 (6%) Query: 64 RCGVVCFSSNYELYADMSN-RVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLTDFG 120 E + R++ L E++PRV+ +A C++TG D Sbjct: 3 HVHFHFRPPVPEDDGSGAYGRLLDLLREVTPRVQALPPADADCEVTGGPRAFDGDPGALA 62 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN--LERQRKLMSA 178 R IR L + +G A+ +TLA +A AA G L E + Sbjct: 63 RLIRTRALTFHGVVTSIGCAENRTLAAMAADAAGP------GRTVLIPRHPEAVAGFLRP 116 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQL 237 PV + G+G ++ L G++TV +ADT + +R+ +R G + Sbjct: 117 RPVTALPGVGPATARLLVHHGLRTVGAVADTPLPTLRRLLGAAEGQRLSERAHGVDHRPV 176 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 P +F D R+A+ + A R +LRS+ + ++ ++ + Sbjct: 177 SPGEPPA-FRTAGHAFARDELDPGRRRRAVAALAERIGGRLRSDGRIAGRLTLTVRYADG 235 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + + L P+ +++AA +++ R + + G+ + A Sbjct: 236 S------TTARDRALPEPSHSGPVLVSAACSLYESLGLQRARVRGLSLRAGELLPEAYAA 289 Query: 358 LNL 360 L Sbjct: 290 TQL 292 >UniRef50_B2B126 Predicted CDS Pa_3_8130 n=2 Tax=Sordariales RepID=B2B126_PODAN Length = 575 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 44/355 (12%), Positives = 96/355 (27%), Gaps = 84/355 (23%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA C P L P+ + + N A+ GVK + K Sbjct: 23 VILHFDLDCFYAQCIENANPHLKSVPLGI--KQKSILATCNYVARKHGVKKLMGIQEAKR 80 Query: 61 LFRRCGVV-------CFSSNYELYA-----------------DMSNRVMSTLEELSPRVE 96 L + + ++Y+ ++ V + V Sbjct: 81 LCPDLVLADGEDLSPFRDVSKQIYSLLKSYSWNGRVERLGLDEVFLDVTDVVAYNLGLVN 140 Query: 97 IYSIDEAFCDLTGVRNCRDLTDFGREIR-------------------------------- 124 + ++E++ L+ R RE+ Sbjct: 141 HHCLEESWFCLSREDPERGFAFDAREVEGCVWPPDFVSDRENEGTDSLRLRLLFGSHLAF 200 Query: 125 --ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 ++ T GI+ K LAKLA K + L + + LP+ Sbjct: 201 YLRQQMEGLGYTSACGISTNKLLAKLAGDRNKPRNQT-----TLLSSHSPLPFLDPLPLR 255 Query: 183 DVWGIGRRISKKLDA----------MGIKTVLDLADTDIRFIRKHFNVV--------LER 224 + GIG + + + + + + + ++ Sbjct: 256 KIPGIGGKTITAMKSLLKTDDDDDGLTVHNARTNPAVSPFALERLLAGSGSGGEKGIGQK 315 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 L G +++ ++I ++ +T +R + ++ Sbjct: 316 VWLLLHGIDGSEVKPTMDVPRQIGIEDTY-RGLTQLSQVRAGLVQITTSLLRRMH 369 >UniRef50_Q1YPI9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPI9_9GAMM Length = 444 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 60/363 (16%), Positives = 114/363 (31%), Gaps = 20/363 (5%) Query: 35 GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR 94 V+ + AK G++ L ++ E ++ SP Sbjct: 1 MRVLCCSESAKQSGIEPQLSLSTALALCPE--LLTLQRQPEREKTRLQQLALIAYSFSPV 58 Query: 95 VEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 V I + +L+G + T L V +GIA + A+L Sbjct: 59 V-IIDEKGLWLELSGCEKLFHSYRQLLQQLQTKLLHHCTDVAMGIAGSAYAARLLC---- 113 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 Q G +L + ++ + + +R + +G+ + DL + Sbjct: 114 ----QPGFRCELPQSIELEQQFRRTSLNLLR-VTKRQQQSFQQLGLTYLDDLLALPRAEL 168 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 F + ++ L GE QL+ F P + I + + + R Sbjct: 169 ASRFGTAIVEQLQLLLGEKPCQLKLFNPPA-TFHDLLQSPQGILSKQGLLFPMKALLQRL 227 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 + L++ YCR I +S + L +++ + LD I Sbjct: 228 SIYLQARQCYCRKIEWRF------EPLIGDHSSMCITLSGSQNSWSTLLDLSRLQLDRIN 281 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 G + + DF L+LF D + + ++D+L+A+ G L Sbjct: 282 LPG-SIETIILSTDDFAEGLPEGLDLFGDTSAGEERLETNRLIDSLSARLGPEALQQPVM 340 Query: 395 GIQ 397 G Sbjct: 341 GDN 343 >UniRef50_A1BA10 Putative uncharacterized protein n=6 Tax=Rhodobacteraceae RepID=A1BA10_PARDP Length = 506 Score = 119 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 57/397 (14%), Positives = 111/397 (27%), Gaps = 36/397 (9%) Query: 16 TVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 P+ + + + A N A+ G ++G + + + + Sbjct: 25 RRGDAWPEDIPLALAAPGPHGPVIHAANRAAERAGARIGTRAVDSRAICP--ALHIEPAE 82 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 E A R+ P D D TG + R L Sbjct: 83 PERDAARLARLAFWARRWGPYSTPDGDDGIILDTTGAAHLFGGEAAMLAEIQAGFARAGL 142 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 T + +A T+ A + T ++ LPV + + Sbjct: 143 TARLALAPTRGAAWALARFGPERAICT----------DPLPALAPLPVAGLR-LSGETLL 191 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHF-----NVVLERTVRELRGEPCLQLEEFAPTKQEII 248 L +G+KT+ DLA + + F + + G L+ E Sbjct: 192 LLRRLGLKTIGDLAAIPRLSLMRRFARAEPQDNPLVRLDQALGRAAEPLD-APEPAPEFA 250 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 E + D + A ++ + + CR + + + Sbjct: 251 AEARLAEPVMDPSD---WLPGLLADLCAQMAAADRGCRRLCLSVFRVDGERRDIR----- 302 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 V + PT+D ++ L+ + G+ + + AQ L Sbjct: 303 -VAMAAPTRDPGHLLRLFDGRLERL-DPGYGFDLIRLAAEAVEPLAQAQPGLDGAAPTGL 360 Query: 369 GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 L ++D L A+ G T+ ++ +RA Sbjct: 361 ---ALARLVDRLAARFGAQTISR--PLPRESHVPERA 392 >UniRef50_B3R9B4 Required for the error-prone processing of DNA lesions along with dnaE2 and imuA n=25 Tax=Burkholderiaceae RepID=B3R9B4_CUPTR Length = 514 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 113/387 (29%), Gaps = 17/387 (4%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 PV V++ V+ N A LGV+ G + L +V + A + V Sbjct: 34 PVAVMA--REQVVLANGPAMQLGVRYGMRRGGVQAL--SADIVQLERDPAAEAALMEAVA 89 Query: 86 STLEELSPRVEIYSIDEA---FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 L +P V + EA D++ +++ VG T Sbjct: 90 LALLRFTPGVTVDEEPEAATLMLDVSASLRLFGGHRALCRAVRACVRQLGTVAQVGCGPT 149 Query: 143 KTLAKLANH--AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 A + + + R +L+ LPV+ + + LD +G Sbjct: 150 AHGAAWLARQPLRRTRRGVVRPGRRAVGMARLHRLLDRLPVEALHTL--ADPAWLDGIGC 207 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 +T+ ++ + + L + + GE + F RI Sbjct: 208 RTLGEVRRLPRAGLTRRLGPALLARLDQAYGEAPARFIWFVAP-PAFAQRMDLPGRIESA 266 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSR 320 + A L + ++ + G + L P++D Sbjct: 267 EGVLAGAQRLLLALAGWLAVQQAGVTRCVLVLEHERYRRGAATEGTPVPLGLAQPSRDPA 326 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + LD + + + + LF + P E L ++DTL Sbjct: 327 HLSRLLREKLDKL-SFHAPVTGLALRVEAMAACVPQSDALFPEPGGTP--EDLGRLLDTL 383 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAML 407 A+ GR + + +RA Sbjct: 384 MARLGRDNVLQPRPLADHR--PERANR 408 >UniRef50_B7S067 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S067_9GAMM Length = 474 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 53/376 (14%), Positives = 109/376 (28%), Gaps = 22/376 (5%) Query: 23 WGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSN 82 + VVVL+ V+ N A ALG++ + L V + A Sbjct: 21 EEQAVVVLAKQR--VLRANDYAAALGIREDMGATTVRALLADEPVQLLERDTSAEARCLQ 78 Query: 83 RVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 ++ ++P + + D ++ D + + V G+A T Sbjct: 79 QLCCWGYSITPSLHTHGADCLQLEIGSCLALFRGMDLLLAEVSNGIASRGFRVEYGLAPT 138 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 A L + + + L + L + L G+ T Sbjct: 139 PGAAWLLSFSE--NDQANDYQRPLQDRLTPLPLSLLSGFNT-------TVDSLRRAGLHT 189 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 D+ + + ++++ G+ ++ P FG + Sbjct: 190 FGDILSLPPSALGRRCGAEFTGHLQQVLGQRENIHPDYQPPT-NFSDEYWFGYEVRGNEE 248 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + AI LR+ I + +L E +S+S D + Sbjct: 249 LMPAIQLLLQSLCRFLRNTQLQTAEILWQLVGIDHSLEEIRVRSSSSH------SDWENW 302 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 L+ + + ++ S + ++LF R E L +++D L Sbjct: 303 YQLTRIRLERLELKVE-VEGLALICDTLNSGQLENIDLFSP---RKQREPLASLLDRLRN 358 Query: 383 KEGRGTLYFAGQGIQQ 398 + G + G + Sbjct: 359 RLGLQAVKKVGCRNEH 374 >UniRef50_B8KMW0 Putative aspartate decarboxylase n=2 Tax=gamma proteobacterium NOR5-3 RepID=B8KMW0_9GAMM Length = 449 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 51/382 (13%), Positives = 106/382 (27%), Gaps = 23/382 (6%) Query: 34 DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP 93 + A NA A LG++ G + L + + ++ + + ++P Sbjct: 4 RQRIYAVNATASLLGLEPGMDPASARALAGETPLQLLPRDPDMESKALESLCCWAYGITP 63 Query: 94 RVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAA 153 + + D ++ G +D L + + + T A +H + Sbjct: 64 HLYPFRDDCLMLEIGGSLKLFGGSDAILRHCRKGLAGRGYSADMALGITPLAAWSFSHIS 123 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF 213 + G Q + + ++ + L G T+ ++ Sbjct: 124 S-DGNSSKGCC----EREQLEKLPLRTLEPLH----EQFIALQRGGFTTLGEILALPGAS 174 Query: 214 IRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 + + ++ L GE F P S G + ++ + A+ Sbjct: 175 LSRRCGSQFRELLQHLSGEVVPPPVHFEPPS-CFADSYPLGYPVRNHDELGPALEQLLTS 233 Query: 274 AAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI 333 + LR R I Y S SV+ +D L+ Sbjct: 234 LEDYLRQRQLQTRQIIWHF------SGLNNYRESLSVRTSEARAPRQDWYRLTRLRLER- 286 Query: 334 WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 + + S +LF S QL +D L+ + G + Sbjct: 287 QPFAQEVELVQLHADQLESAQPTSGDLFRQAGQSTSSSQL---VDLLSNRLGAQAVN--S 341 Query: 394 QGIQQQWQMKR-AMLSPRYTTR 414 + + + +P TT Sbjct: 342 LHYRDAHLPEHSSTKAPSGTTN 363 >UniRef50_Q2W2X2 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Magnetospirillum RepID=Q2W2X2_MAGSA Length = 493 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 59/393 (15%), Positives = 116/393 (29%), Gaps = 28/393 (7%) Query: 16 TVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNY 74 P P+V S V+A N A+ G++ G V + Sbjct: 19 CRSAPAWRDIPLVTASAGPHRQVMAVNRVAQVQGLRPGMKLASALAQVPH--VQIAPHDP 76 Query: 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLT 134 + A + + +P + + D++G + E L+ LT Sbjct: 77 QGDARLLGALAERCTLFTPWCAVEGTAGLWLDISGCGHLFGGETKLLEQLTGRLKGLGLT 136 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 V A A ++ T ++ ++ LP+ + + + Sbjct: 137 VRAA----LAATPGAAWAWARFGDATTPIL------DSPDQLAPLPLAALR-LPPATVQT 185 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 L +G++ + DL + F + + G + P SF Sbjct: 186 LSDLGLRRLGDLLGLPRAQVSLRFGREAVWRLDQALGAEPEPISPRRPPAP-YRVHASFA 244 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 + I+ + + +L + Q R + + L G Sbjct: 245 DPISRAEDIAATLDHLLEGLCRRLGLDGQGARRLELTLFRVDGTLARAEIGT------GA 298 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 P++D + L I + G + A + G Q AQ +L QL Sbjct: 299 PSRDPVHLARLFRDRLAEI-RPGFGIEAACLEAGVVQPQAAAQTDLGGAAG----EAQLS 353 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 ++D L+ + G G L + +R++ Sbjct: 354 RLLDALDNRLGPGRLMRLAP--RPSHVPERSVR 384 >UniRef50_B0W8N7 DNA polymerase eta n=1 Tax=Culex quinquefasciatus RepID=B0W8N7_CULQU Length = 820 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 8/117 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY E P++ G+P+ V+ G +IA N A+A GV + Sbjct: 16 VVVLVDMDCFYCQVEEKLNPEIKGQPIAVVQYNPWQGGGIIAVNYPARARGVTRHMRGDE 75 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG 109 + + ++ Y D V + L+ +P +E S+DEA+ D+T Sbjct: 76 ARQHCPEIVLPQVPQRGGKADISKYRDAGKEVAAVLQTFTPLLERASVDEAYMDITE 132 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 84/225 (37%), Gaps = 20/225 (8%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 EIRA V ++T GIA K LAKL K ++ + L+ KL Sbjct: 203 GASIVNEIRAAVKEKTGYECSAGIAHNKILAKLTAGFNKPNKQ------TVLPLKSISKL 256 Query: 176 MSALPVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEP 233 L + V G+G ++ ++ + + I+ + L + ++ HF+ + RG Sbjct: 257 YQTLQIKKVKGLGGKLGEQVCELLKIEFMSQLTQFSEKQLQAHFDERMGSWMYLMARGID 316 Query: 234 CLQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSE----HQYCRF 287 + + I C + F IT +++ + A ++L + ++ R Sbjct: 317 LEAVTPKFN-SKSIGCCKRFPGKNAITGLATLQHWLGELANEIQDRLEKDLDENNRTARQ 375 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 ++ + ++ SV L+ ++ I A ++ Sbjct: 376 MTVSYAQQIGDNDV---SSTRSVPLVCY--EAERIAKDALEAIRR 415 >UniRef50_Q0ANL5 Putative uncharacterized protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ANL5_MARMM Length = 449 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 58/347 (16%), Positives = 111/347 (31%), Gaps = 23/347 (6%) Query: 64 RCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYS----IDEAFCDLTGVRNCRDLTDF 119 +V ++ + SP V +D D+TG Sbjct: 1 MPALVTAPADDRGDIRALTALARWSGRWSPVVAPDPAGPGLDGLILDITGCTRLFGGETA 60 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + +V + A T LA A + + + ++AL Sbjct: 61 LLDAMMEGFAELGFSVRLAAAPTIGLAWGAARF----DPDSRNRPLCIDPDTAADRLAAL 116 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV+ + + +S +L A+G+ L + + F + L R + + RG+ L+ Sbjct: 117 PVEALR-LAEGVSSRLRALGLTRAGLLLQQPRAALARRFGLDLPRRLDQARGQESEPLDP 175 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + S F E + ++ A+ ++L + + R + + S Sbjct: 176 -IRPARAFRSSLRFAEPVPGLDPIKTALPHLVGPVCDQLTNAGRGARRLVLSLVGSNGRA 234 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDFFSQGVAQL 358 G +A+ + DS II SLD + G + + + Q Sbjct: 235 VRVAIGTAAAER------DSGHIIRLLGESLDRLEADFGLGVEALHLTAPSTAAFTARQA 288 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 L PG E ++D L + G + A ++ W +RA Sbjct: 289 RL----DGTPGEEATSHLVDRLRLRLGETGVRRAAS--RESWSPERA 329 >UniRef50_B1VF25 Putative DNA polymerase involved in DNA repair n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VF25_CORU7 Length = 556 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 53/412 (12%), Positives = 110/412 (26%), Gaps = 37/412 (8%) Query: 34 DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP 93 D V A NA A+A GV+ G + ++ A + +++ L +++ Sbjct: 53 DYRVQACNAAARAQGVRQGMKQRHALATCPE--LRHAPADPVQEAAIHEDIVAALMDVAA 110 Query: 94 RVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAA 153 VE + N E+ R + G A A A Sbjct: 111 GVETLRPGLVALPTRPLANYYGGEAAAVELLLDSAARLGVECLAGTADDLMPAVWAARRG 170 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF 213 + + L V+ V + L +G++++ D A + Sbjct: 171 VHVPPGRNSSFVPTLP------IGFLAVEAVLSAPAELVSTLQELGVRSLRDFAALGRKH 224 Query: 214 IRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 + F R GEP ++ P + + E I + AAR Sbjct: 225 VAGRFGAEAVYWHRVACGEPGREVSPQRPAQP-VEVLHQVEEPIRSTETAAFVARQAAAR 283 Query: 274 AAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR----- 328 +L + C ++ + +P A + + P + + Sbjct: 284 LHGELFRRGEACLRLTVRVHLNPPAEYTGPTVVERAWRCREPLTEEDTAQRVRWQLDGWI 343 Query: 329 ----------SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL----- 373 + + ++ + G L+ + + Sbjct: 344 TRLRAKVGEPEQEGFEDSAAGVVAIELLPVETVPAGTIAEPLWGGADEGLRAARAAAGRA 403 Query: 374 -----MTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSS-DLL 419 M + + + GR + +S + TT+ +L Sbjct: 404 QALIGMAAVQQVVHRGGRAIGGRVLTLPYGEEVP--EEISAQPTTQWRGELP 453 >UniRef50_A7BC74 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC74_9ACTO Length = 517 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 47/408 (11%), Positives = 112/408 (27%), Gaps = 46/408 (11%) Query: 28 VVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMST 87 V+ + V + A++ GV+ G + + ++C + + A + V+ Sbjct: 24 AVVHSERIEV--ASGAARSAGVRSGMSVREAMYVCPD--LICLPRDPDREARAFSAVVDA 79 Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR-EIRATVLQRTHLTVGVGIAQTKTLA 146 + ++ VE A C G + + + + + + VGIA + Sbjct: 80 FDSVAAGVECVRPGVARCRARGPARWHGSEEAAALALVSAIEEAVGVECFVGIADGPVAS 139 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV-DDVWGIGRRIS-------KKLDAM 198 A + + + +P+ +W + ++ + L + Sbjct: 140 LEAAREG-----------RIVPAGENQLFLGRIPLHRALWAVPVAMTDRAADAIELLTGL 188 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 G+ T D + + F V E+ G L + +I Sbjct: 189 GVHTCADFLALGRGRVCERFGDVGEQLWNLASG-GDSALTPAGRIQPDITMECVIDVGGD 247 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 +M I A +++L + + + + + + Sbjct: 248 SINTMIVPIQRIARDLSQRLGRGGLVSQTLRIDV------EDAGGGQRTRTWSGCDVCVS 301 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN----LFDDNAPRPGSEQLM 374 + R A W +G V + L+ + + Sbjct: 302 DEVALRV--RWTLAGWTSGIEGPSGAVTCIRVTACDPRVGRSASALWGRSD---RERDVS 356 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 + + G +L +Q + + S TR ++ Sbjct: 357 RSVVRIQGMAGPDSLL--IPRVQGGYDPR----SRVVMTRWGSKPLLR 398 >UniRef50_B7FSY6 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FSY6_PHATR Length = 531 Score = 117 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 56/425 (13%), Positives = 112/425 (26%), Gaps = 110/425 (25%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FY CE + R +P + ++ N A+ +GV + Sbjct: 64 VIIHLDIDCFYCQCEKLDRNLADDRPFAIG--QKHIIVTCNYAARKMGVGKLESRESAIR 121 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-------VEIYSIDEAFCDLTGVRNC 113 ++ S+ E Y V + V S+DE DLT V Sbjct: 122 KCPSL-LILEGSDLERYRVYGRNVYMAFRRACQQLGGKKMAVCKGSMDEMMVDLTHVDFL 180 Query: 114 RDLTDFGREIRATVL-------------QRTHLTVGV----------------------- 137 + + G + + +T T V Sbjct: 181 ANTRENGNSLDQVYVYGSRSGEATTLTEDQTGATATVVYDKTASRDTKETRLVRKQYFEA 240 Query: 138 ---------------------GIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 G++ + LAK+A+ K V++ +L+ Sbjct: 241 ASMALAIQNQILEQTGFTTTLGVSNSPMLAKIASGLRKPA------TVNILYPWDATELL 294 Query: 177 SALPVDDVWGIGRRISKKLDA-----MG------------IKTVLDLADTDIRFIRKHF- 218 + +P+ V G GRR+ L G T DL + + Sbjct: 295 AGMPLRKVSGFGRRMMYALHPSLESYYGSLIPTARSKSSPCWTCSDLLRIPVEEVASCLC 354 Query: 219 ---------NVVLERTVRELRGEPCLQLEEFAPT-KQEIICSRSFGER-ITDYPSMRQAI 267 + V + + +G ++ + + + SF + + + Sbjct: 355 TVNGLEEKASHVALELLEKCKGIDSSKVIDDDGGLSKTVSVENSFRRGTVRTLNDLNHEL 414 Query: 268 CSYAARAAEKLRSE--------HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 S R L + R + ++ + +S + T Sbjct: 415 LSLCKRLPRLLDERLNCSPFPKRAFPRTLRVTVRFVSSLRQQDDKAHSHTRSKQTALDGY 474 Query: 320 RDIIN 324 + Sbjct: 475 AFLCK 479 >UniRef50_C1F5L8 Putative uncharacterized protein n=2 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5L8_ACIC5 Length = 508 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 61/404 (15%), Positives = 123/404 (30%), Gaps = 26/404 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQ 58 ++A V F RP L +P VV+ V + +A+ LG+ G + Sbjct: 7 IYACLCVREFPTQALLRLRPQLRNQPCVVMEGEPPLEQVCSLTRKARILGLLPGMTQVEV 66 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFC---DLTGVRNCRD 115 GV + + S ++ SPRVE S +F D+ G + Sbjct: 67 DTF---SGVTVLQRSRKEEITTSEALLECAGSFSPRVEEVSYRHSFVCVVDIAGTQELFG 123 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + + T + + VG++ A +A A V + + Sbjct: 124 PPNKLAQNLLTRVSALGIAACVGVSSN-FHASIAVARA-----PLALSVRVIPPGEEGAA 177 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 ++ALP+ + + + ++ + GI+ + LA R + + + RGE Sbjct: 178 LAALPLTVL-NLSEQQAETFSSWGIRNLGMLAALPERELISRLGQPGKHLRQLARGEAPH 236 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 P + + ++ + + + ++ + Sbjct: 237 LFLPVEPEF-TLHERMELDSPVAVLDALMFVANLMLEQLIVRATARVLALAAVTVALTLE 295 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 A +++ PT D I L+A + + S Sbjct: 296 GGASCL------RTIRPALPTNDRPLWIKLLHLDLEAH-PPQAAVLAIRLEA-EPGSTSQ 347 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 Q+ LF P P +L + + + G + A + Sbjct: 348 VQMGLFSPQLPEP--SRLDVTLARIRSIVGDENVGRAVVADTHR 389 >UniRef50_C6QBZ4 Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QBZ4_9RHIZ Length = 497 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 54/400 (13%), Positives = 117/400 (29%), Gaps = 27/400 (6%) Query: 16 TVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 P V ++ G + A +A A A G++ G + R + +++ Sbjct: 10 QRETGSGTDLPRVFVAKVKGVSQLSAVDARALAAGLRTGMALADARARLPR--LHAVAAD 67 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 + +P V + + D+TG + L + Sbjct: 68 PSADGAFIAHLGDLALAFTPSVALDPPNGLALDITGCSHLFAGEAMLAARLQKALCAAGV 127 Query: 134 TV-GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 +V + +A T +A+ + L+ LPV + + Sbjct: 128 SVVRLAVAPTPDMARALARFSPANPCF----------AEDDALVRGLPVAAL-ECAEDDA 176 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 L G+KT+ ++AD F + + GE ++ + + Sbjct: 177 TALRRAGLKTIAEIADRPSLLFTARFTSAFTAKLARILGEEDNRITPRGRRVR-YRAEQR 235 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 E + + + + + E+L R + + + S Sbjct: 236 CAEPVASHDVIARLLSDLVVSVCEQLGERSVGGRIFTGIFMRADGVVRRIRVETS----- 290 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 PT++ I+ L+A+ V+ + + NA ++ Sbjct: 291 -QPTRNPDVILRLYRDRLEALADPLDPGFGFDVICFEAIRVEPWIESQGTFNAQDDQKDK 349 Query: 373 LMTVMDTLNAKEGRGTLYFA----GQGIQQQWQMKRAMLS 408 + ++D L+ GR + ++ M A LS Sbjct: 350 VAQLVDRLSTMFGRERVMRLHPLDSHVPERAQTMLPAALS 389 >UniRef50_UPI0001AEC5B6 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC5B6 Length = 495 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 56/369 (15%), Positives = 110/369 (29%), Gaps = 24/369 (6%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS--SNYELYADMS 81 PV V + + N AK G+++G + L ++ FS + + ++ Sbjct: 45 NTPVAVYCSKTNKITQCNDIAKKEGIEIGHGLAQAAALCPYVHILPFSEEAEKHMLTQLA 104 Query: 82 NRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGI 139 +R+ ++ + S L + + + L + Sbjct: 105 HRLYPLASDIVLDNHIHSNSFSGLAVRLDNLTHYYGGHKPLWKTLTQALAEADIRYHFAS 164 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A T AK+ K L + +K +S P+ + + ++ L +G Sbjct: 165 AWTIEAAKVLA-LHKFNTH-------LHTPDDIKKALSTCPLS-ITALSPKVIDSLARVG 215 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 + V L ++ + + F+ + LRGE + I + Sbjct: 216 VSCVQQLLAMPVQELGRRFDNNTIMYLTALRGE-TFPRVTLFRPLEHFDNFILLPFDIEN 274 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 + + + LR+ + Y IS I F N S + Q Sbjct: 275 TQHLTPFVTQQFEHLSHYLRARNLYTSSISVHIH---FREAPVMDINIRSALPQSSVQSW 331 Query: 320 RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 + + T +L + F + F D +QL + Sbjct: 332 LPLFSLKTENL----VLPEPATAIALTCQQFEEMDTQNGDFFSDRFNDIAQKQL---IGR 384 Query: 380 LNAKEGRGT 388 LNAK G + Sbjct: 385 LNAKLGDNS 393 >UniRef50_A4AKV5 Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AKV5_9ACTN Length = 494 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 115/396 (29%), Gaps = 22/396 (5%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P V+ G V A +A A+A G+ G + + F G++ + + L + Sbjct: 2 DVPFVL--TEKGLVFAASASARAEGISRGLRLREAQSRFP--GLIDRAYDPALDSRAFEP 57 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR-EIRATVLQRTHLTVGVGIAQT 142 V++ +EEL P V++ + G + V + VG+A Sbjct: 58 VIAGIEELIPGVQLLRPGMCAVRVRGAAQYYGGEKAAALTVIDRVNEIVASDARVGVADA 117 Query: 143 KTLAKLANHAA-KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK 201 A A+ + Q + + ++ L + + +I L +GI Sbjct: 118 LFTAVHASRSTVGVDQVSRSARARIIPAGESAQFLAPLAISVLD--EPQIVTLLIKLGIS 175 Query: 202 TVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 T+ + A +R F + R G P + F + Sbjct: 176 TLGEFAQLAHADVRTRFGDLGARLHALASGRDPQAFIARTPPLD-LDVVIDFEPALDRVD 234 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD 321 + + S A E L I + + + E + + S T Sbjct: 235 QITFGVRSRADDFIEGLVRAQLVVTAIRIELDSESGEIAERVWLHPRS---FAATDVVDR 291 Query: 322 IINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 + S + ++ + G + L+ ++ + + Sbjct: 292 VRWQVQGSNLIEAGLSSGISRVRIVPETVDAIGNHETGLWGSGL----EPRIHHGLARVQ 347 Query: 382 AKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 + G G + + Q ++ T D Sbjct: 348 SMLGHGGVLVPTVQGGRTLQSRQQ------LTAWGD 377 >UniRef50_B7ANI6 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANI6_9BACE Length = 194 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 64/186 (34%), Gaps = 8/186 (4%) Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 + ALPV D+ +GR ++KL IKT+ DL TD F+ + Sbjct: 2 YKSEFKHKAWALPVGDLLYVGRSTNQKLTKFRIKTIGDLTRTDEAFLHSQLGKMGNILWS 61 Query: 228 ELRGEPCLQL--EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 G + E + + S + + + ++ + A A +LR C Sbjct: 62 FSNGYDDSPVKKENTHAPIKSVGNSTTTPRDLENDGDVKIVLYILAESVAARLRENGFRC 121 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 R + ++ + + + K+ T + +I A + + + + GV Sbjct: 122 RVVEISVR------DNELFSFTRQKKIDHATNITGEIAAYAYQIVKENYHWQKPIRSVGV 175 Query: 346 MLGDFF 351 D Sbjct: 176 RGADLV 181 >UniRef50_B1ZZZ2 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZZ2_OPITP Length = 526 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 59/422 (13%), Positives = 115/422 (27%), Gaps = 47/422 (11%) Query: 10 FYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 F +L G+PV +L ++A EA+A GV+ G + G+ Sbjct: 10 FALQAVLRLERELVGRPVGLLDETLRPPAIVACTPEARASGVEAGLTAAQAMARC--AGI 67 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATV 127 ++N + +++ +SP VE + + G+ R + + Sbjct: 68 TLRNANPAAETEARAALLAAAFSISPHVEDTAPGVGTMQVGGLAEERRVPALHAAVTQ-- 125 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL------------ 175 L L G+A T LA A + +S ++L Sbjct: 126 LHGLGLVATAGLAATPLLALYAARFGQYHNSAARVGRGVSPSRELQRLAEDGSPYLLGGS 185 Query: 176 ---MSALPVDDVWGIGR---------------RISKKLDAMGIKTVLDLADTDIRFIRKH 217 + V G R ++ L GI+T+ +L + + Sbjct: 186 GLPLRNEIVHLAPGTERMFLRDLPLAVAEPLPETAEILAGWGIRTLGELTALTKADVTQR 245 Query: 218 FNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 GE L Q + + + + + R A + Sbjct: 246 LGPAGLALWERAAGEVTRPLR-LIAPTQRFAAELTLEHEVETLEPLLFVLRRFIDRLALE 304 Query: 278 LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 LR+ ++ + S + + +L PT + L+ + Sbjct: 305 LRNAGFVAGELTLTLSLSDETAH------ARDFRLPEPTAQEEILFRVLHTHLETL-HTA 357 Query: 338 HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 + + Q LFD P + + A G + Sbjct: 358 ATVRGLRLECRPVRPL-TRQHGLFDSALRDP--HGFAETLGRVAAVVGADRIGTPVVADT 414 Query: 398 QQ 399 + Sbjct: 415 HR 416 >UniRef50_B7ZA36 cDNA, FLJ79050, highly similar to DNA polymerase eta (EC 2.7.7.7) n=9 Tax=Mammalia RepID=B7ZA36_HUMAN Length = 651 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 12/202 (5%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+RA + + T GI+ K LAKLA K ++ L + +L S Sbjct: 134 IVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQ------TLVSHGSVPQLFSQ 187 Query: 179 LPVDDVWGIGRRISK-KLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQ 236 +P+ + +G ++ ++ +GI+ + +L ++ HF RG Sbjct: 188 MPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMCRGIEHDP 247 Query: 237 LEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 ++ + I CS++F + ++ + A E+L + ++T + Sbjct: 248 VKPRQLP-KTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDRVATQLVV 306 Query: 295 S-PFALNEPYYGNSASVKLLTP 315 S ++ L Sbjct: 307 SIRVQGDKRLSSLRRCCALTRY 328 >UniRef50_A9UR36 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UR36_MONBE Length = 265 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 38/197 (19%), Positives = 58/197 (29%), Gaps = 44/197 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA V P+L KP+ V N A+A GV + + Sbjct: 4 VILHFDLDCFYAQVHMVQEPELRLKPLGV--QQKTIFATVNYVARARGVPKMARISEAQR 61 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLTGVRN------ 112 + + + Y + S + + L+E P VE +DE F D T + Sbjct: 62 ICPDIVIRNGE-DLTDYREASEHIFAFLQEQFPHCPVERLGLDEFFVDATTPAHALCSDG 120 Query: 113 ---------------------------------CRDLTDFGREIRATVLQRTHLTVGVGI 139 R R + + T GI Sbjct: 121 FWSPTPHFHLTASPNWCGHPAAHAAANLAQYQALRAGAQLTDWARKELKAKFGYTCSAGI 180 Query: 140 AQTKTLAKLANHAAKKW 156 A K AK+A K Sbjct: 181 AVNKLQAKMAGELHKPD 197 >UniRef50_B6R5I9 Protein ImuB n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5I9_9RHOB Length = 442 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 47/314 (14%), Positives = 97/314 (30%), Gaps = 18/314 (5%) Query: 78 ADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGV 137 + + + +P V + D D++G + + L+ V Sbjct: 12 ESLLAALADWCDRYTPLVAVVGDDTLLLDISGCAHLFGGEKAMLDDCLNRLKLQGFHVSG 71 Query: 138 GIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA 197 +A T A + + QR + L ++ + + I L Sbjct: 72 AVADTVGAAWAVARS----------DGGVIAPREQRDALEPLSIELLR-VEENIVTSLMR 120 Query: 198 MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 +G+ + DL D + F L R + + G + ++ R F E I Sbjct: 121 VGLTVIGDLLDRPRAPLANRFGEDLVRRLDQALGMEGEPISPRLY-TPALVVERRFFEPI 179 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + I S + ++L + R + +N G S ++ Sbjct: 180 AREDDVVAVIQSLSENLQKELEKRQEGGRAFELVLFRVDGVVNRLAVGTSGPIR---APN 236 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVM 377 + +++ AG Y + + + AQLNL ++ + L ++ Sbjct: 237 LVLQLFRERLKTVGDELDAGFGYDLIRLAVLEAQCCSAAQLNLEGNS---HHEDDLAELV 293 Query: 378 DTLNAKEGRGTLYF 391 D L A+ G + Sbjct: 294 DRLGARLGLAQVSR 307 >UniRef50_A8N619 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8N619_COPC7 Length = 484 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 75/202 (37%), Gaps = 16/202 (7%) Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +R V T LTV GIA K LAK+ + K + + + M +L + Sbjct: 1 MRKAVFDETQLTVSAGIAPNKMLAKICSDKNKPNGQFKLEF----EPDSIKAFMHSLSIR 56 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTD--IRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V G+GR + LD++GI+T D+ I + K F L+ +R G + Sbjct: 57 KVPGVGRVNERLLDSIGIRTCGDIYQQRGVIALMDKRFG--LDFLLRVYLGIASNHVAPH 114 Query: 241 -APTKQEIICSRSFGERITDYPSMRQAICSYAAR-------AAEKLRSEHQYCRFISTFI 292 ++ I R+F +++ ++ + A+ E ++ E + ++ Sbjct: 115 AREERKSIGAERTFSTLDSNHADPKKGSVAIVAKLEEVAEELVEDMKREGWVGKTVTLKY 174 Query: 293 KTSPFALNEPYYGNSASVKLLT 314 K + S + Sbjct: 175 KLDTYQTFTRAKQFSKWITTKE 196 >UniRef50_A3JJR9 DinP DNA polymerase-like protein n=3 Tax=Marinobacter RepID=A3JJR9_9ALTE Length = 472 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 51/390 (13%), Positives = 114/390 (29%), Gaps = 24/390 (6%) Query: 16 TVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 + R +V++ + V+ +A + GV+ G L + ++ + Sbjct: 15 HIRRSRKQDAALVIVDASGQKVLQACTQASSQGVQPGMRLKTALSLV--ADLAMVRTDPQ 72 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTV 135 A + L + + + D ++ ++ E L LT Sbjct: 73 QEARVLQDQARWLYRCAAHITLVPPDGLLAEIGSLQKLYGGLPAVWETVEQGLNERRLTA 132 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +GI T A+L K G +L+ LP+ + + +L Sbjct: 133 WLGIGHTPLAARLIARTGKGECSADQG--------HMLRLLEQLPLAEA-EFDTQACTRL 183 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 +G+ T+ +L + + + ++++G + P + F E Sbjct: 184 QRLGLNTLGNLFALPAAELARRLGPKILAHSQKIQGTRPDPQTPWQPPHR-FRQQADFVE 242 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 I + + + E L Q ++ + + S P Sbjct: 243 DIEHSQGLLFPLQRILSELEEDLCWRQQETDSLNLLLCYRYTEPTRLHIRTSG------P 296 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 + +N + ++ + + +L + +E T Sbjct: 297 EHRAEAFLNLIRLRFEQQPLQAPVVSLVLLVKRFIGREAASGQDLLGETQDM--NEAWHT 354 Query: 376 VMDTLNAKEGRGTLY----FAGQGIQQQWQ 401 ++ L A+ G G L A +Q W Sbjct: 355 LISRLQARLGDGALQQLAPHADHRPEQAWA 384 >UniRef50_B8ELP7 Putative uncharacterized protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ELP7_METSB Length = 488 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 43/359 (11%), Positives = 94/359 (26%), Gaps = 23/359 (6%) Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + + ++C ++ E A ++ +P + + D D++G + Sbjct: 1 MNLADARAMHP--ALICAEADPEGEAQTLAHIVDWCRRFTPLAALDAPDGVMLDVSGAAH 58 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 L+R G+A T A L + Sbjct: 59 LFGGEASLLAEIEESLRRQGFCAQGGLASTPEAAFALARYGAADFAARILPPAL-DAVEL 117 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 + + LP+ + + L G++ + D+ I + L + L G Sbjct: 118 ERRLGGLPLAALR-LEPETLSALAEAGLRRIRDVTMRPRAPIAARCGLALYARLDGLLGR 176 Query: 233 PCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + + R F + + + +I A L + R + + Sbjct: 177 VKTPISPRF-EAPAFMTERRFLDGLCRREDVEASIAGLAQDLCALLTRHGEGARRLEASL 235 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI--------WQAGHRYQKAG 344 + G P +D I +A+ + AG + Sbjct: 236 FRVDGEVMHFTVGTMR------PLRDPALIARLFHERFEALSLAQDGEAFDAGFGFDVIR 289 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGS----EQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + + Q + + E L ++D L A+ G + Sbjct: 290 LAALALERKDPEQTGWSGQDRAEDRAQDHVEDLAELIDRLGARLGLRRVTRLAFNGTHA 348 >UniRef50_A4JFF8 Putative uncharacterized protein n=2 Tax=Burkholderia RepID=A4JFF8_BURVG Length = 521 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 48/374 (12%), Positives = 103/374 (27%), Gaps = 16/374 (4%) Query: 28 VVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMST 87 V+ + VIA A+ GV++G + V + + Sbjct: 5 AVVESGQ--VIALTRAAREAGVRLGMRRAGALAIAPD--VQLSGRDPAKEVEALGAAALA 60 Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + +P V D +++ + L +A T A Sbjct: 61 MLRFTPSVARMGDDALVLEVSSSLRLFGGVRAILRQARQAIADLGLNARFSLAPT---AS 117 Query: 148 LANHAAKKWQRQTGGVV--DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD 205 A A+ G ++ L + + LP + +R++ +D +G K++ D Sbjct: 118 GAWLLARPPGSGHVGGFRRRVAKLSTLSRCLDRLPFGLLPE-SQRMAAWIDGIGCKSLGD 176 Query: 206 LADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 L +++ L + GE E +R+ ++ Sbjct: 177 LRRLPRAGLKRRCGPGLLDAMDRAYGEAAESFEWEIAPA-TFDAKVELPDRVEHAEALLF 235 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 A + L ++H + + + L T D + Sbjct: 236 AGRRLIVQLTGWLAAQHLAVSRFALLLDHERGRAAIEPTRLD--IALADATGDPEHLARL 293 Query: 326 ATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEG 385 L + ++ + + +LF D A G +++ L A+ G Sbjct: 294 LKERLGRLALL-APVIAVRLLADETRERPGVSDSLFPDPAAAEG--DFAQLVELLTARLG 350 Query: 386 RGTLYFAGQGIQQQ 399 + + Sbjct: 351 AENVLQPALAPDHR 364 >UniRef50_D0LH57 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH57_HALO1 Length = 468 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 98/320 (30%), Gaps = 37/320 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 A + +F P L G+P+ V+ + N VIA + A G++ G + Sbjct: 3 IACVYLPSFPLQAHVRELPHLLGEPLAVVDSSLNGSTVIACSRAAWEEGIRPGMATATAR 62 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSI-DEAFCDLTGVRN------ 112 + V ++ LY + ++ L E+ V+ + G+ Sbjct: 63 AIVPELSVEV--ADPALYERAAAALVEGLLEICEVVDPDGELGTLGLERGGLHRAIYVQA 120 Query: 113 --CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLAN------------HAAKKWQR 158 G +I T+L R VG+A + A +A + Sbjct: 121 PPRMRGDALGHKII-TMLGRHGFRGRVGVADDRFTAYVAAVTVGRGGKVARIDESDTRPP 179 Query: 159 QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF 218 ++ LP+ + I + L G+KT+ D A + + Sbjct: 180 LFHQSFTTVPRGGSASFLAPLPLSFLP-IDDEVQSMLHTCGVKTLGDFAALPPPSVSRAL 238 Query: 219 NVVLERTVRELRGEPCLQLEEFAPT---KQEIICSRSFG-----ERITDYPSMRQAICSY 270 + RGE + + ++ + + +D A+ + Sbjct: 239 HQ--VDFRALARGEGSRTVRGVVRGAQLQHPVVECITLPAPASAQDESDVVGAGNALRTL 296 Query: 271 AARAAEKLRSEHQYCRFIST 290 R A ++ + + +S Sbjct: 297 CDRVAHRMVARDRAVTGLSL 316 >UniRef50_C7MCU6 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MCU6_BRAFD Length = 589 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 43/374 (11%), Positives = 94/374 (25%), Gaps = 45/374 (12%) Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G + V+ +++E + + V + ++ ++ V++ G Sbjct: 91 PGMKRRAARAACPD--VLVLEADHEHDSALFELVAAAVDTIAAGVDVLRPGVLLMSARGP 148 Query: 111 RNCRDLTD-FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + + I V + T VGIA A LA+ + Sbjct: 149 ARHQGGEEALAERILDAVAELTGWDCAVGIADGPFAALLAS-----------PPGRIVRE 197 Query: 170 ERQRKLMSALPVDDV------WGIGRR----------------ISKKLDAMGIKTVLDLA 207 R + ++ P+ + G G R L +GI T+ DLA Sbjct: 198 GRSAEYLAPHPIAALRHAPVGPGWGHRGQPSATRPERRLDLAETVDLLQRLGITTLGDLA 257 Query: 208 DTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAI 267 + F + RG+ Q + + + Sbjct: 258 ALPSAAVADRFGPDVATLHLLARGQEPAP-PAAHHPTQPLFAETTLETPLVRTDQAAFIA 316 Query: 268 CSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAAT 327 A + L C + +T E + + ++ + I Sbjct: 317 RPLAEQLHTMLLERGLVCTRLRIVARTESGEEMERTWRHDGALSVADVVD---RIRWQCD 373 Query: 328 RSLDAIWQAGH---RYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKE 384 + G + G+ G + L+ +++ Sbjct: 374 GWITRARLGGPATGAITRIGLHPQQLAPAGESAPALWGSAG--EAAQRASRAFARAQGLA 431 Query: 385 GRGTLYFAGQGIQQ 398 G + + + Sbjct: 432 GEEAVQVPARAGGR 445 >UniRef50_Q6NJ12 Putative uncharacterized protein n=1 Tax=Corynebacterium diphtheriae RepID=Q6NJ12_CORDI Length = 508 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 53/354 (14%), Positives = 95/354 (26%), Gaps = 20/354 (5%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 + V+++ V NA A+ G++ G L V+ + E + R Sbjct: 25 HRAVMIVDQRRVMV--CNARARKAGIRRGMLVKHALAL--DENVMMVPYSPERDTRVFER 80 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 ++ +++++ VEI D+ G + E V ++ + VGIA Sbjct: 81 IVRDIDQVAANVEIARPGIVLIDVQGAGAFHGSEEKAAEKIMDVTSKSGMESFVGIADDI 140 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 A +A S L V++ L G+ T+ Sbjct: 141 PTAIIAARRNAVVPLDGSVRYLDSQPTEL------LRVEEALECDPDTVAHLQTCGLTTL 194 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 D+A +R I F + + S + + IT Sbjct: 195 GDIARISLRDITTRFGPRGHHCWTIATAQTQRTMSTPTSEID-HSVSITPEDPITRIDEA 253 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI- 322 A A +L + C I + D Sbjct: 254 FF----LARSLATQLHNAGLTCHR--IKIIAVIGNQAHERTWRTRGDLSDHAISDRVRWQ 307 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 + A S+ + + +Q L+ N SEQ M Sbjct: 308 LEAWLASVPEGIDDSVGIVQLTLRPY--ECMRPSQPQLWGTNKSDEESEQRMIA 359 >UniRef50_A0YAE9 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAE9_9GAMM Length = 481 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 116/380 (30%), Gaps = 23/380 (6%) Query: 33 NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 V+ N A G+K G L + ++ V S Sbjct: 18 ERQIVLQANPPAVEKGIKNGHSMATALSLHPE--LQAVERQINREKELLEHVAVWAYRFS 75 Query: 93 PRVEIY-SIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 P+V I + F ++ G + + +++ L G++ + L ++ Sbjct: 76 PQVSIDEQLSAVFLEIRGSLKLFRGFNRLFHYLSEGIKKRKLHFYCGLSHNPIASYLISY 135 Query: 152 AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI 211 + K + ++ + ++ALPV + + + K L +MG+ + + Sbjct: 136 SDK-DPEYYRQSPTKLDSKKILQNLNALPVALLP-CRKSVKKNLQSMGLTHIHSVFSLPK 193 Query: 212 RFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYA 271 + K F + L+ E F P + SR F + + + I Sbjct: 194 TSLGKRFGREFFDLIAYLKNEEKEHRSLFVPPEH-FNSSRYFLNGLNNKQQLHPYINQLL 252 Query: 272 ARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 LR R ++ + + +S V R + + L+ Sbjct: 253 TELKNHLRFRQLINRQLNWQLNYIDGGSDSLRLNSSLQVFQQ------RSLFDITLLKLE 306 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD------NAPRPGSEQLMTVMDTLNAKE- 384 + + + +F G +LF +E+ VMD L ++ Sbjct: 307 QMKLR-ANIESLSLSCKEFEKIGSYNDSLFQQHDNELLAEDDSKNEKYNVVMDKLLSRLQ 365 Query: 385 GRGTLYFAGQ---GIQQQWQ 401 + + + ++ W+ Sbjct: 366 SKHCIQLSTHNDLLPEKAWR 385 >UniRef50_Q0BZD3 Putative uncharacterized protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZD3_HYPNA Length = 521 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 47/349 (13%), Positives = 91/349 (26%), Gaps = 22/349 (6%) Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 G+ G + + + + E A + + SP V + ID + Sbjct: 49 GIHAGLRFTDARATLPD--LASEEIDRENDARALTALAGWMVRFSPLVGVDGIDGLILET 106 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 TG + + L + IA T A G + Sbjct: 107 TGCDHLFGGESGMAAELSAKLAHAGYGHKIAIAGTVGAAWALT-----HATVEMGKPVIL 161 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV----LE 223 +R ++ LP + + L G+ + L D D + + + FN Sbjct: 162 ANGDERTGLADLPTRALR-LSESSQILLRRFGLTRIRQLYDIDRKALTRRFNSRQSADAV 220 Query: 224 RT-VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH 282 R + + G F P E +TD + + E L + Sbjct: 221 RLRLDQALGIRPEPFTPFRPPPD-YSTRLPCPEPLTDGAGISAGLSRLTEELCEHLSASG 279 Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 + S + + P + ++ DA+ G Sbjct: 280 VGAQSFLLQAFRSDGEIARIRVNAAR------PVRKPEHVMRLFGEKTDAV-DPGFGIDL 332 Query: 343 AGVMLGDFFSQGVAQLNLFDD-NAPRPGSEQLMTVMDTLNAKEGRGTLY 390 + + + + L + D +NA+ G G + Sbjct: 333 LLLEAFRTGEMATGSRLISGGFSQADVDEDALAALADRVNARLGEGVVT 381 >UniRef50_A9VB80 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VB80_MONBE Length = 722 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 59/396 (14%), Positives = 120/396 (30%), Gaps = 83/396 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFY E P+L +P+ V +IA + + KA G+ + + Sbjct: 6 VIIHADLDAFYTQVERQRHPELKDRPLAV--QQWSGLIAIDYKCKAAGIGRHSTVEEARK 63 Query: 61 LFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + V ++ E Y S +M+ +E+ E SIDEA+ D+T R+ Sbjct: 64 ILPDLACVHVDVINQKASLEPYRQASRDIMAVMEQYG-TFERASIDEAYFDVTQEAQQRE 122 Query: 116 LTDFGREIRATVLQRTHLT---------------VGVGIAQTKTLAKLANHAAKKWQRQT 160 ++ T L + V +A T A Sbjct: 123 AQTPATQLCRHYADLTLLQRGAVELRADLTLEDWLRVAMAST-----HVMGYAPDDGPDD 177 Query: 161 GGVVDLSNLERQRKLM----------------------------SALPVDDVWGIGRRIS 192 + L+ + L G + Sbjct: 178 HLGFGWLPKSEEDALLFHGAMIAAEIRFRVFEETGYVCSAGIAHNKLFAKMGSGFNKPSQ 237 Query: 193 KKL---------------DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 + L + + + L L+ ++R + + LRG + Sbjct: 238 QTLYPRASSGDQQYRQAGERLLVADCLGLSLAELRT--EFSSETAAWLHGLLRGHDSRAV 295 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL----RSEHQYCRFISTFIK 293 P + ++ ++S + T + I + A ++ R +++ + K Sbjct: 296 ASKGPP-RSLLEAKSITGQATQLIVVEYWINNLCHGLARRILDDARRHNRWPKNYVLQFK 354 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 + Y+G S S + +RD++ A + Sbjct: 355 R---RADRTYFGASRSCGPVPHI--TRDMVRHAQAN 385 >UniRef50_D2DXS2 Nucleotidyltransferase/DNA polymerase n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXS2_9BACT Length = 493 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 60/392 (15%), Positives = 113/392 (28%), Gaps = 17/392 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 MFA V F C P+L + + ++ N V A+ GV +G + Sbjct: 1 MFAAIYVPDFALQCVLRRDPELRDRLLAIVDGNLPARVRQMTPVARDHGVTVGMTTTQAL 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 ++ ++ S ++ E SP +E + G R + Sbjct: 61 GRSP--TLLFRTAGLLD--AESACLLQCAETFSPWLEATGEGVVTIEWRGDAENRSSVEA 116 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN-LERQRKLMSA 178 E L T +G+A T LA LA H A + V LS +A Sbjct: 117 VAESIVRQLAALAFTARIGLAATPALALLAAHCASPVRIVERAVDFLSPLPLETLSADAA 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + D+V + L G+ T+ + A + G L Sbjct: 177 MCSDEVQAAREEAFRLLHRWGLHTLGEFAALPREQVVARLGGEAAELWDRAAGRAGRPLR 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + + + + + + A +L + ++ + + + A Sbjct: 237 LVRAPEI-FAEAMELEHEVETLEPLLFILRRFLEQLAARLTAAYRVAATLELRLGFAAGA 295 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + + ++ PT D + L+ I + Q Sbjct: 296 PH------AHEFRIPAPTCDVEVLFRIVETHLETIRAE-APIIAVELRA-RPTRAEHKQF 347 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 LF+ P + + L A G + Sbjct: 348 GLFESGLRDPN--KFFETLARLQALLGNDRIG 377 >UniRef50_Q92ZK0 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti RepID=Q92ZK0_RHIME Length = 244 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 7/165 (4%) Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK 201 K LAK+A+ K + + + + LP+ G+G ++K+ +GI+ Sbjct: 80 NKFLAKMASGQNKPDGQF------VITPKNGPAFVEQLPIKKFQGVGPATAEKMHRLGIE 133 Query: 202 TVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 T DL + + F+ +HF RG Q++ ++ + + E I + Sbjct: 134 TRADLKEQTLEFLVEHFGESGPCFYGIARGIDNCQVK-ADRVRKSVGAEDTSSEDIHSFE 192 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 + R+ + + + + + +K + F + G Sbjct: 193 AAREGLQPLIEKVWSYCEANEISAKTVPLKVKYADFPDHPEQDGC 237 >UniRef50_A8B5P1 DNA damage repair protein n=2 Tax=Giardia intestinalis RepID=A8B5P1_GIALA Length = 867 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 100/278 (35%), Gaps = 25/278 (8%) Query: 18 FRPDLWGKPVVVL-------SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 R L G PV++ +N+ ++ AK +G++ G + + Sbjct: 277 ERTRLIGAPVIIANQFDSKEANDGAIILDCTKAAKQMGIESGMTVGEAFERCP--TTQVL 334 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-----RDLTDFGREIRA 125 S + ++Y + L + S + + +EA DL+G + G +++ Sbjct: 335 SYDTKMYNTKGQELFKVLGQFSKAIMPMNYNEAVLDLSGHVSLSAANGNSCLALGLQLQQ 394 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 VLQ T L +G + A++A A + R L+ P+ + Sbjct: 395 RVLQETGLHCSLGFGDSLFAAQIATKLAGSNGIFSATSSTC------RTLLINRPLSFLP 448 Query: 186 GIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQ---LEEF 240 G+ + ++ + +GI ++ I I + +V ++ + L+G Sbjct: 449 GLSSEVEQQFAEQLGITKCGEILSAQIGDICQIISVDQAKQLISMLKGRTDDASKGFFPV 508 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 + + F + +++ + +++A +L Sbjct: 509 RTEGLQPRARKLFLNTLESKQIHKKSTETLSSKALRRL 546 >UniRef50_Q1IJA4 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJA4_ACIBL Length = 495 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 69/392 (17%), Positives = 119/392 (30%), Gaps = 28/392 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQ 58 M+A+ F A RP+L KPV V+ V A N A +GV+ G + Sbjct: 1 MYAVIYAREFPAQALLRLRPELRQKPVAVMEGEPPREFVCAANEFAYRMGVQRGMTRPQM 60 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSID---EAFCDLTGVRNCRD 115 + L V + ++ SPRVE + D++G Sbjct: 61 EVL---EAVETLRRSRAEEDAARAALLECAGRFSPRVEELRFEYTLAVGADISGTEKLLG 117 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 T+ + V V + A AK + + +RK Sbjct: 118 TTEQIVRRMCEHAAVMGMEVSVAASCNFDAALC---WAKAHAGTK-----VISPGEERKT 169 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 ++A+PV DV + S G+ T+ +LA + +R GE Sbjct: 170 LAAVPV-DVLDLTLDQSVTFSLWGVHTLGELAALPQAELIARLGQDGKRLRELACGEHQH 228 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 L+ + F + S+ + + +++S ++ Sbjct: 229 LLKPVGEPFV-LREEIEFEADVESLDSVMFVLAPMLQQLCLRVQSRALALASVTVQCGLD 287 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + + +V+ + PT D + ++ L A G V Sbjct: 288 GGTTH------TRTVRPVLPTIDHQALLKLIHLDLIA-NPPGAAVVALRVFTETNRPSRA 340 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRG 387 L LF P P +L + L A G Sbjct: 341 Q-LGLFSPQFPEP--MRLEVTLARLAAVVGGE 369 >UniRef50_B8K9K1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K9K1_VIBPA Length = 466 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 50/404 (12%), Positives = 126/404 (31%), Gaps = 37/404 (9%) Query: 1 MFAL---CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFK 57 ++ ++A YA E +P++++ V+ RNA AK G+ +G Sbjct: 5 IYLHFPTLQLDALYA--EQSE------QPLIIVEGKRFQVVQRNALAKEQGIDLGMGLGS 56 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 L ++ + + + + L ++ + ++ T + + Sbjct: 57 ASALCQQ--LQVHPYDESVEHKTLLDIAQWLYMVTSDIALFPPQGILLKATDMLSLYGGL 114 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + L LT + A L + G + + + + Sbjct: 115 KAYWQHVFRHLSTLKLTFHFATGFSPFSAMLLAK--------SEGQFICHDKDEIIQRLQ 166 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 P+ + + + L +G+ + L + ++ I + F++ L V L G+ + Sbjct: 167 RYPLIA-TELDPKQVETLSRVGVTHLHQLLELPMQDIARRFDIDLVNYVGRLMGQFKHPM 225 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + P +Q I + + + + L +Q ++ + Sbjct: 226 DFYHPPEQFQSY-LELLFDIEHIQWLEKPLGKLLNKLEIFLTLRNQVGYELALTLHQRDH 284 Query: 298 ALNEPYYGNSASVKLLTPTQD--SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + SV + + D + + +L++I Q + L Sbjct: 285 QDS--------SVTFTSASGDYLAHRWMTLCQLTLESIKLE-APVQGLTLSLIRGGELES 335 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + ++F + + +L + L AK G + + Sbjct: 336 SSKDIFAGHQGQQSELEL---IGLLQAKLGHERVRKVAMSDDPR 376 >UniRef50_D0LTL3 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTL3_HALO1 Length = 527 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 56/439 (12%), Positives = 123/439 (28%), Gaps = 44/439 (10%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQKD 60 A D+ AF P+ G PVV++ + G ++ + A+ + G + Sbjct: 5 ACVDLPAFPLQLLRQRHPEWAGHPVVIVDEDAPQGRILWADERARERRILPGQRYAHALS 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEI--YSIDEAFCDLTGVRNCRDLTD 118 L + A + V L E SP +E + D G+ Sbjct: 65 LAPDLHAGVI--DEREIAAGVDAVCELLREFSPEIEPCADLPGVFWLDGAGLERLFRSLR 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 L+ V + + T+ + + + + + Sbjct: 123 KWARGIERALRERGYEVALAVGFTRFGSYAVAR------GRPRALSIFDDRASEHAAARD 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + ++ + G+ ++ + L +G+ TV + I + F R R GE L Sbjct: 177 VALERL-GVDPQLREHLRRLGVVTVGEFLHLPAGGILERFGAEAHRIHRLAAGESWDPLR 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + F + + + A+ ++L + ++ + Sbjct: 236 PTPAPEP-LEECVLFDDPERNTERLLYALEGALTPLLDRLAKDRCALTRLAVELTLDDAI 294 Query: 299 LNEPYYGNSAS---------------------VKLLTPTQDSRDIINAATRSLDAIWQAG 337 ++ PT + + ++ +A Sbjct: 295 QTRAQPRTRGRNRPSAHVEGRDAHDHPVRVDAIRPAEPTLELQTVMRLVRLRFEA-EPPR 353 Query: 338 HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 ++ + +G + QL LF R + L A+ G + A Sbjct: 354 AAVRELRLRVGAILATR-EQLELFAHAP-RRDLRAANEALARLRAELGDHAVVKASLREG 411 Query: 398 Q------QWQMKRAMLSPR 410 W+ R + P+ Sbjct: 412 HLPEARYAWEPLRELRLPQ 430 >UniRef50_UPI0001745839 nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745839 Length = 525 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 58/376 (15%), Positives = 112/376 (29%), Gaps = 24/376 (6%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 G P+ CV+ NA+A+ L V G + + + Sbjct: 60 GTPLA---REQACVLQVNAQAERLLVHPGMTASMARARC--ATLQFLYRDAGAELAAQEV 114 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 ++ +P E S DL+ + + L R+ LT VG A+ Sbjct: 115 LLQCSSNRTPFYESTSPGLCVLDLSSLPGVKGAELAYGRAICEELARSKLTARVGFARRA 174 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 LA LA H A + + E R + ALP++ + + ++ G+KTV Sbjct: 175 DLAILAAHTAAP-------IRVMLGEEVDRACLGALPLEVL-QPAWQTAEVFALWGVKTV 226 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 DL + + G L+ F I + Sbjct: 227 GDLCKLPRAGVTERLGREGMLLWDLATGGRDRLLKLV-RPVPGYRVEEDFEHSIECLEPL 285 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII 323 + + ++L + + + + + +++ PT+D + Sbjct: 286 LFILRRHLQSLCDRLGATWRVAAAAVVELHFEDGSRHL------RELRIAEPTRDVELLF 339 Query: 324 NAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 +L+ + A + + G L LF+ P + + L A Sbjct: 340 RVIHTALEGV-SAAAPIRGVVLEFRAVTPAGSQSL-LFERTLKDPN--RFAETLAHLEAV 395 Query: 384 EGRGTLYFAGQGIQQQ 399 G G + ++ Sbjct: 396 VGSGNVGRVRLLPSRR 411 >UniRef50_A9IPJ8 Putative uncharacterized protein n=4 Tax=Bordetella RepID=A9IPJ8_BORPD Length = 488 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 91/327 (27%), Gaps = 12/327 (3%) Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTH 132 + + L + +P + + D + + A L+ Sbjct: 69 DVPAEHRILREAALALLQYTPDIALAEPDAVLLQVDASLAYFGGPRALHKRVAATLRAMG 128 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 L +G+A T A L A + + + + ALP + R+ Sbjct: 129 LHASLGLAPTAQGAWLLARQAVPRAPRR-----VLQARTLARRLDALPCALLPSAQARL- 182 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 L +G T+ L +++ L R + G+ P + Sbjct: 183 DWLHDIGCHTLGALRRLPRAGLQRRCGTGLVRALDAAYGDAAECHAWIQPPAR-FRQRLE 241 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 + I ++ + + L + + + ++ ++ P S L Sbjct: 242 LPDYIEHADAVLASARRLLEQLCGWLAARQRAVQHLTLVLEHERGRHARPPTVLPLS--L 299 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 P ++ L + + + Q A LF + P Sbjct: 300 AQPAWQQPHLLGLLREKLGRLQLE-APVISLVLRVTGTVEQPAASTCLFPEPGGTPAEHA 358 Query: 373 LMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 ++D L+A+ GR + A + Sbjct: 359 --RLLDLLSARLGRERVLHARPVADHR 383 >UniRef50_Q5QUT8 Homolog of DinP DNA polymerase involved in DNA repair n=1 Tax=Idiomarina loihiensis RepID=Q5QUT8_IDILO Length = 467 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 52/405 (12%), Positives = 123/405 (30%), Gaps = 34/405 (8%) Query: 17 VFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNY 74 +PD P+ + L N ++ N A+ GVK L + + Sbjct: 17 RLQPDSNTLPLALYQLQGNQSVIVQCNTLAREAGVKPSIQTVMAISLCEQ--LQLVEYIP 74 Query: 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLT 134 E + ++ + L + + ++ +Y +L+ + D + + + Sbjct: 75 EREQQVLQQLATRLYQWAAKLVLYPPKGLAIELSSLAQLYGGMDAVFNTLSREVDALPIK 134 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 + +A A+L N + +L++ LP+ G+G + K Sbjct: 135 AQLAVADNPLAAQLLAEYDCP---------VSLNRKESAQLLAQLPIGAA-GLGTKTQKH 184 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 A G + + +L + + + + + ++G F P + S Sbjct: 185 CKAAGFRQLGELIQLSGDEVGRQLGLETQLYLERIQGRQQQSYNFFTPPE-SFRQSLDLV 243 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 I + + + + L + + +S + + + V L Sbjct: 244 TEIPHWQGLLFPLKRLFGELEDFLYQRQKVTQQVSIELH------HRYEPPSVVPVALAE 297 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 P + ++ +++I + ++ + + F R + QL Sbjct: 298 PGWRGQSFLSLLQLKMESIPLP-EAVIEITLVANELLQSEQHNSHFFGVQQHRHETLQL- 355 Query: 375 TVMDTLNAKEGRGTL---------YFAGQGIQQQWQMKRAMLSPR 410 + L AK G + ++ K +LSP Sbjct: 356 --IGRLQAKLGNNAVFSPAMNDDPRPGNNEFRRPAGEKPQVLSPA 398 >UniRef50_A4AA43 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4AA43_9GAMM Length = 448 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 47/358 (13%), Positives = 99/358 (27%), Gaps = 20/358 (5%) Query: 32 NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL 91 + A NA A LG++ G + L + + E + + Sbjct: 1 MEKQRIYAVNATASLLGLEPGMDPAAARSLAGDSPLQLLPRDPEAETQALESLCCWAYGI 60 Query: 92 SPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 +P + + D ++ G +D L + + + T A ++ Sbjct: 61 TPHLYPFRGDCLMLEIGGSLKLFGGSDAIIRHARQGLAGRGYSADIALGATPLAAWAFSY 120 Query: 152 AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI 211 AA + + + ++ + L G KT+ ++ Sbjct: 121 AASDDDAEKDYS-----QSERLHKLPLQTLEPLH----EQFVALQRSGFKTLGEVLALPA 171 Query: 212 RFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYA 271 + + ++ L GE F P + S G + + + A+ Sbjct: 172 ASLNRRCGAQFRELLQHLSGEVIAPPVHFEPPS-CFVDSYPLGYPVRNQDELGPALEQLL 230 Query: 272 ARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 A + LR R + N + + + TP QD + Sbjct: 231 ASLDDYLRQRQLQTRQLIWHF---SGINNYREVLDVRTSQARTPRQDWYRLTRLRLER-- 285 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 + + S +LF + + QL +D L+ + G + Sbjct: 286 --QPFTEEVELVQLRAEQLESAQPTSGDLFRQASQSESTSQL---VDLLSNRLGARAV 338 >UniRef50_Q2NAX5 Putative uncharacterized protein n=3 Tax=Erythrobacter RepID=Q2NAX5_ERYLH Length = 529 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 51/369 (13%), Positives = 106/369 (28%), Gaps = 33/369 (8%) Query: 50 KMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG 109 + G + L + S+ D ++ + P + D D+T Sbjct: 68 RKGMMLADARTLCPE--LKVAPSDPAGDLDALEKLALWAQRWGPWSALDPPDGVVVDVTA 125 Query: 110 VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 V + + + +T + IA T A H L+ Sbjct: 126 VAHLFGGETKLLADAQALFAKRGITARLAIAPTAGAAWALAHYGPPRS-------ILAAD 178 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTD-----IRFIRKHFNV---- 220 + +S LPV + + + L +G+K + +L + I + F Sbjct: 179 DDMAARLSELPVAALR-LDDDVLTILRRLGLKKLGELGKVESEGGGRDAIMRRFRNRKSP 237 Query: 221 --VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 + +L G+ L ++ R E I + Q + A +L Sbjct: 238 AANPLVRMDQLLGKVPEPLLPVIAQHDPLVQRRLV-EPIRHRALLDQVLRDLAEDMVREL 296 Query: 279 RSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH 338 R + + + ++L T+D+ + + L+ I AG Sbjct: 297 EGRGSGARRLELGLWRVDGEV------VVRRLELAAATRDADHMCRLFSEKLEDI-DAGF 349 Query: 339 RYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + + +AQ ++ + + L +D L + G + Sbjct: 350 GIETVRLRASWAEPLALAQGDI--EASAEEHGTSLAAFVDRLTTRLGPRAVRRPIPF--G 405 Query: 399 QWQMKRAML 407 +RA Sbjct: 406 SHIPERAQR 414 >UniRef50_C4LH03 Putative DNA polymerase involved in DNA repair n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LH03_CORK4 Length = 573 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 43/333 (12%), Positives = 96/333 (28%), Gaps = 33/333 (9%) Query: 11 YASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 YA+ ++ P+ ++ + V + +A+ +GV+ G + + L ++ Sbjct: 40 YAA---RCDNEVPDGPLALVDQHG--VYVCDRQARHVGVRRGMKRRQAQSLCPTMHIM-- 92 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 ++ + A ++ ++ +S +E+ + + + + R Sbjct: 93 PADDDRDARYFEDFVADVDSISAGIELLRPGLIAVKSAPLVKYYGSEERAITMVLDAVAR 152 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW----- 185 + V G A T A A ++ LPV + Sbjct: 153 PGVDVIAGAAGTLPTAVFAARRG-----------MTIPEGHDADFLAGLPVRTLCEDKAL 201 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ 245 G + + L+ MGI + D A R + F RG P +L T Sbjct: 202 GQPQELVDTLEKMGITRMKDWAGLSRRDVSSRFGAEGLWWWSIARGAPSRRLTPQENTSD 261 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYG 305 + + + ++ AA ++L Q C ++ ++ Sbjct: 262 -LAITHHCDSPESRSDTVAFIGRRLAADLHDQLSDRGQICLRVAIRALIRTPDGDQELER 320 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQAGH 338 + + A G Sbjct: 321 VWRC---------TDQLTEHAIAQRVRWQLEGW 344 >UniRef50_Q1N4J7 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N4J7_9GAMM Length = 480 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 54/382 (14%), Positives = 120/382 (31%), Gaps = 21/382 (5%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 + V+++S ++ N+ A +K+G L + + E + R Sbjct: 23 DQAVIMVSEQHHKIVQLNSVALEKELKIGMGLATAASLC--HDIQVLIYDEEKESKHLKR 80 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + L ++ + +Y + + + + L H V + T Sbjct: 81 IARWLYSVTADIGLYPPNGIVLRVDSMLHLYSDLKHYWHAVQQQLAHCHAQVHSAMGVTP 140 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 A+L + + + +Q L +L D+ + KL +G+ TV Sbjct: 141 LAARLLARTQ---TQPRPQISMDTKKLKQIALSKSLSDADIH---AKTRFKLSRLGLNTV 194 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 D+A + K F L +++L GE ++ + P ++ I++ + Sbjct: 195 ADIAKIPRAELAKRFGHELAIYLQKLLGEIQDPIQFYIP-NKQFQEYVELAYEISNSQYL 253 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII 323 + + R L+ + C I+ ++ ++ + L Q I Sbjct: 254 IKPLQRLLLRLQYFLQQNNARCSEITLQLEHREEKATIEQIASAEPITLAEKWQSLCAIK 313 Query: 324 NAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 + H + +Q A+ +LF +L + L K Sbjct: 314 -------FENLKLKHPVIGITLTANKQSTQQSARGDLFSKKQNAMSENEL---ISHLKIK 363 Query: 384 EGRGTLYFAGQGIQQQWQMKRA 405 G + G + + +R Sbjct: 364 LGDDRVL--GIRLNNDERPERE 383 >UniRef50_C3KFQ7 Putative ultraviolet light resistance protein B n=2 Tax=Pseudomonas RepID=C3KFQ7_PSEFL Length = 179 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 59/122 (48%), Positives = 77/122 (63%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +F+L D N FY SCE +FRP+L GKPVVVLSN+DGC++A EAK LG+KMGDP+FK + Sbjct: 9 VFSLVDANKFYCSCERIFRPELRGKPVVVLSNSDGCIVACTNEAKELGLKMGDPYFKIRA 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 R GV FSSNY LY ++S+R+ L VE YSID+A + + R Sbjct: 69 FLERNGVAAFSSNYTLYGELSHRMAMATASLVSAVEQYSIDDALGYVLSLNLYRRQLTVA 128 Query: 121 RE 122 + Sbjct: 129 QR 130 >UniRef50_B9QVQ0 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QVQ0_9RHOB Length = 523 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 58/363 (15%), Positives = 117/363 (32%), Gaps = 23/363 (6%) Query: 32 NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL 91 +++ N A+A G+++G+ + ++C ++ E + V Sbjct: 5 RGARRIVSMNDTARACGLRLGEAEADARARIPH--LLCEDADPEKDTALLGAVADWCARY 62 Query: 92 SPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 +P V + D F D+TG + + + L R V A Sbjct: 63 TPLVALDGKDGLFLDITGCAHLFKGEEALLKDALERLHRQGFCV--------AGAIAGTA 114 Query: 152 AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI 211 A + G L++ + ++ A + L+ +G+KT+ L D Sbjct: 115 GAAWALARYGSGGVLADSQERQA--LAPLPLAALRVSSEAVSGLNQVGLKTIGQLYDRPR 172 Query: 212 RFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYA 271 + L + + G + I R F + I+ ++ S A Sbjct: 173 APLTNRLGADLILRLDQALGWQGEAISPRF-EAPLISAERRFFDPISQLDDVKAVALSLA 231 Query: 272 ARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 +AA+ L + R + A+ + G S +P +D + ++ L Sbjct: 232 GQAAKALERRVEGGRVFELSLFRVDGAVQKFRVGTS------SPLRDPKRVLRLFAEKLK 285 Query: 332 A---IWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 A AG Y + + + A + N + L ++D L A+ G Sbjct: 286 ADEGAIDAGFGYDLVRLDVL-VADKAPAVQSALTANGAVEANASLDDLVDRLGARLGSER 344 Query: 389 LYF 391 + Sbjct: 345 VTR 347 >UniRef50_UPI00003828C5 COG0389: Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003828C5 Length = 208 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 72/215 (33%), Gaps = 11/215 (5%) Query: 198 MGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 GI TV +LADTD+ ++ G ++ + + +F Sbjct: 1 WGIWTVAELADTDVASLQAAVGKVSGAHLHDLAWGRDSRPVQPERSE-RSVGAETTFEHD 59 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 + D +++ + A R A +LR + R +S ++TS F + + L PT Sbjct: 60 LRDLAAVQARVLELADRCAGRLRHQGLVARTVSVKVRTSDFR------TVTRARTLGAPT 113 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV--AQLNLFDD-NAPRPGSEQL 373 +R+I A + + G + GV + Q L + + Sbjct: 114 DVAREIYLVARELVAGVDLRGLAVRLVGVRAEGLEPRAEAVVQPTLEEAVVGTNAVRRRA 173 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 +D + + G ++ + LS Sbjct: 174 EEAVDAVRGRFGVRSIAMGPARARSTTNPGDVELS 208 >UniRef50_C7Q6R5 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q6R5_CATAD Length = 535 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 102/400 (25%), Gaps = 58/400 (14%) Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 GV+ G + L + E V++ L + +PR E+ A L Sbjct: 51 GVRRGQRTRDAQRLAPGLALHARDEAAEA--RAFEPVLAVLADFTPRYEVVRPGLAALPL 108 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 G D + + GVG+A A LA + Sbjct: 109 EGPARYFGGEDLVVRAIRDRVGEAGIGAGVGVADGVFAASLAARSD-----------TQV 157 Query: 168 NLERQRKLMS--ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 R + ++ V D+ + L +G++T+ LA+ + F Sbjct: 158 VPGRTAEFLASFPTSVLDLP----ELVDPLSRLGVRTLGRLAELPADAMTGRFGAAGVAA 213 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 R RG ++ F + A + A L Sbjct: 214 HRLARGLDAQPPAP-LRQGPDLAVEAVFDPPADGSERIVFAAKALADELHAVLAQAGVAG 272 Query: 286 RFISTFIKTS--PFALNEPYYGNSASVKLLTPTQDSRDI------INAATRSLDAIWQAG 337 ++ I + P A E Y LL+ T + + A ++ Sbjct: 273 VRVAVEIHGAAGPGAEPEVSYRLWRHEGLLSSTAVAERVRWQLSGWQTALQADHQNPDNQ 332 Query: 338 HR---------------YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 + + ++ Q L+ N +++ + L A Sbjct: 333 NPDTPGVSPETPTADQGITRLRLIPDHLVPARGVQPGLWGANEAP---DRIARAAERLQA 389 Query: 383 KEGRGTLYFAGQGIQQQWQMKRAMLSPRY---TTRSSDLL 419 G + SP T DL Sbjct: 390 MYGPNAVTLPADAGG---------RSPADQGVRTSYGDLP 420 >UniRef50_D0WMM1 Putative DNA repair polymerase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMM1_9ACTO Length = 516 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 58/390 (14%), Positives = 111/390 (28%), Gaps = 35/390 (8%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 +P VL V+ NA A+ LGV+ G + + VV + S Sbjct: 25 DEPAAVLGVGG--VVCANAWARRLGVRTGMRKREALSICPELVVVQRDVRRDALRFESVL 82 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + F VR + + + VG + Sbjct: 83 QAVDAHVAHVV-VVEPGRVIFPARGAVRAAGSMKALAEALIGQIADVAGCEAHVGCGEGT 141 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD-DVWGI-------GRRISKKL 195 A LA + ++E + + V+ + G+ R + L Sbjct: 142 LAALLAAQSD-----------VFLDVEGSAQFLKRTKVEGTLVGVVPSRRAEARSCLELL 190 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 +G++TV DL D + F + + RG L A T I+C+R F Sbjct: 191 ATLGVRTVGDLTDLGAAAMASRFGEMGSLLWQLARGRDVH-LPAEATTSPGIVCTRVFEP 249 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 + + + A + + + + Sbjct: 250 PLQNVEEAVFSARGLAEELVQVMGVRTAASGRLRIDAVFDDGEELSRSWSVGG------- 302 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 +RD+++ L W G + + L D S A L+ + G+E+ Sbjct: 303 -GGARDVVDRVRWQLGG-WAGGGPLARLELRL-DAASADAAPEPLWGGRS--AGNERAAA 357 Query: 376 VMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 + + G ++ + + + A Sbjct: 358 AVARIQTVLGEESVRVPRKVGGRTAARRHA 387 >UniRef50_D1BHX8 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHX8_SANKS Length = 553 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 53/408 (12%), Positives = 102/408 (25%), Gaps = 42/408 (10%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 +P V V+A +A A+A GV+ G ++ + + Sbjct: 50 PAQQPAAVHDGRR--VVASSAPARAQGVRRGMRLRTAQECCPELEL--LPVDDARDTRDF 105 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDFGREIRATVLQRTHLTVGVGIA 140 V +E L +EI G + R + TV +RT VG+A Sbjct: 106 EPVAVAVETLVAGLEIARPGLLLLPALGATRYHGSEEELARRLVETVAERTGHECQVGVA 165 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG---------RRI 191 L + R+ ++A P+D + R + Sbjct: 166 DGILA-----------SLLAARTALLLPPGQTREFLAAHPLDALLHAATSPDAVTETREL 214 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 +G++T+ DL+ + F R RG I Sbjct: 215 VHLWTRLGLRTLADLSALAEADVHTRFGERGRWAHRMARGADLRPPARRRLEPD-IGVET 273 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 + + + S A + C + T + + Sbjct: 274 ALDPPVERVDTAAFVARSLAEDLYALVLERSVTCSRLRISAHTESGLALSRTW---RTDD 330 Query: 312 LLTPTQDSRDIINAATRSLDAI----------WQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 + I + L+ + + + G Q L+ Sbjct: 331 GALGGLSAARITDRVRWQLEGWLSATGVRGEGDPEPSPLVRLAITAEGVVAAGAQQGRLW 390 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSP 409 + + V + + G + A + + L P Sbjct: 391 GAASGDELRAR--RVTERVQGILGGEGVLSATLQGGRS-AQDQVHLVP 435 >UniRef50_C0W385 DNA-repair protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W385_9ACTO Length = 552 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 46/335 (13%), Positives = 93/335 (27%), Gaps = 25/335 (7%) Query: 41 NAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSI 100 + A++ GV+ G + + L + + E A RVM L + + Sbjct: 54 SPRARSAGVRTGMRLRRARSLCPE--LTVLPAQPEREARSFERVMQALSTVLADPVVARP 111 Query: 101 DEAFCDLTGV-RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 A G R + + V + T + VGIA + LA Sbjct: 112 GLALSGARGPARWLGSEEEVAESLVEAVARETGVECLVGIADSLLACILAARRG------ 165 Query: 160 TGGVVDLSNLERQRKLMSALPVDDV---------WGIGRRISKKLDAMGIKTVLDLADTD 210 + + + +S PV V + + + L +G++ + DLA Sbjct: 166 -----VIVPAGQTAEFLSPWPVSSVLVALATRREREQMKDLIETLTRLGLRRLGDLAQVP 220 Query: 211 IRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 + F + +R R G L + + ++ + + A Sbjct: 221 EADVTARFGPMGQRAHRLASGRA-WILPRSSRPETDVEVVAELDPPVARADAAAFAARHL 279 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 A +L + + ++ S +D + Sbjct: 280 AEELVAQLLRRGMVAGRLRVEAGCEDGSDLSRFWMLE-SAPTSAELRDRVRWQLEGWLAG 338 Query: 331 DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNA 365 A + + + + G AQ L+ Sbjct: 339 RAGQPPASALVRLSLTAMELSAAGSAQTGLWAGPD 373 >UniRef50_A7F1S2 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7F1S2_SCLS1 Length = 465 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 55/305 (18%), Positives = 90/305 (29%), Gaps = 94/305 (30%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D +AFYA CE V +P+ V +IA N A+ G G + + Sbjct: 37 VIALVDYDAFYAQCEMVRLKLDASQPLAV--QQWNAIIALNYAARGFGFSRGASVEEVRR 94 Query: 61 LFRRCGVVCF-------------------------SSNYELYADMSNRVMSTLEELSP-- 93 L + + + Y S + ++ + + P Sbjct: 95 LCPNIIMQHVATWREGETSWAYRSDAADPAMMKKDKAALDPYRIESRKSINIITKHLPPA 154 Query: 94 ---RVEIYSIDEAFCDL------------------------------------------- 107 R+E S+DE F DL Sbjct: 155 PLQRIEKASVDEVFIDLSAHVHSVLVSRYPQLAVDDNVHGSLPLPPRDIVLHWETDNLVD 214 Query: 108 ----TGVRNCRDLTDFG--------REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 T + D + R +R + + H T GIAQ K LAKL K Sbjct: 215 LPTSTDDTHRIDWDEIALNIGAQIVRNLRKEIFESLHYTCSAGIAQNKALAKLGAGFKKP 274 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS-KKLDAMGIKTVLDLADTDIRFI 214 Q+ + +S + + G+ + K +A G ++ DL + I Sbjct: 275 DQQ------TVIRARAVPFFLSTCKMTSIRGLAGVLGVKAKEAFGSNSIPDLLAIPQKEI 328 Query: 215 RKHFN 219 + Sbjct: 329 VAALD 333 >UniRef50_C8NM76 Polymerase involved in DNA repair n=15 Tax=Corynebacterium RepID=C8NM76_COREF Length = 796 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 48/387 (12%), Positives = 118/387 (30%), Gaps = 11/387 (2%) Query: 17 VFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYEL 76 P P+ + ++ + A A+ GV+ G + + + V+ ++ E Sbjct: 33 RDDPAPADDPLAIAEHHR--IRACGLAARRRGVRRGMKVRQARAVCPDLEVI--DADPER 88 Query: 77 YADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVG 136 A M V+++L E++ VE+ + ++ RT + + Sbjct: 89 DARMFEGVIASLGEVASSVEVLRPGLVIIAADAAARYHGSEEVAAQLLIDAASRTGVDII 148 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 G+A T A +A ++G ++ + L ++ G ++ + L Sbjct: 149 AGVADEVTTAVIATRVVGGGVVRSGASTSFL----AQQPLGVLVAEEALGCDGQVVQALQ 204 Query: 197 AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 +GI T+ +LA + + F R ++ S E Sbjct: 205 DLGITTLGELAALPVGSVATRFGQAGLRCHAIATARHGRRVAPPID-GANWEVSHISEEP 263 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 IT + + A + +L C+ + + + + S + Sbjct: 264 ITRVDAAAFRARALAVQLHARLAEAGVVCQVLRVTADFTDGTTSSRVWRTSEPLTEGATA 323 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 R ++ + + + + + +A L+D + V Sbjct: 324 DRVRWQLDGWLTARGVVEETDGGITALWLTPLECVPPEMASEGLWDTGTSHRAVAR--QV 381 Query: 377 MDTLNAKEGRGTLYFAGQGIQQQWQMK 403 ++ + + G + + + Sbjct: 382 VERVQSTLGITAVLQPVPAGGRGVAER 408 >UniRef50_B4SMM0 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=3 Tax=Stenotrophomonas RepID=B4SMM0_STRM5 Length = 469 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 58/403 (14%), Positives = 122/403 (30%), Gaps = 31/403 (7%) Query: 16 TVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 +PD +P+V+ + A + A+A G++ G + L + + + N Sbjct: 17 LRLQPDP-QRPLVLLQGPAQRRVLRAVSPSARAAGLRPGMLLSAAQVLVQDMHLHDYDPN 75 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 E + + S S +V + ++ R + L Sbjct: 76 AEQHTR--QLLASWAYAYSSQVSLDFPHALVMEIGASRALFGDWLTIEKRLRNELHELGF 133 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 + A T A++ + + ++ ++ LP+ G+ Sbjct: 134 RHRLVAAPTAHAARVLANVHDGLG---------IDAQQLPAALAQLPLPRC-GLPSEAVT 183 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 L G++T+ + + + + F+ + + + LRG P L + P + F Sbjct: 184 VLGRSGLRTLGAVLELPRDSLARRFSPEVLQQLDALRGLPTAPLRYYQPPDR-------F 236 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 RI + + L C + ++ + ++ LL Sbjct: 237 DARIEFEYEIESSQALLFPLRRLLLDLAAFLCSRDGGVQRFDLHFEHDLLPASVLTIGLL 296 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD-NAPRPGSEQ 372 P +D + A ++A + + A +LFD A Q Sbjct: 297 APERDPALLFEIARNRMEAFALPAGS-RALRLQAEQLPPFVPAARDLFDTRPAQAMPWNQ 355 Query: 373 LMTVMDTLNAKEGRGTLYF----AGQGIQQQWQMKRAMLSPRY 411 L L A+ G + A ++ + A P Y Sbjct: 356 LRE---RLRARLGDDAVQPLAVQADHRPERASGTQPAAKPPAY 395 >UniRef50_UPI0001C31AE4 hypothetical protein Cwoe_4251 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AE4 Length = 395 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 65/404 (16%), Positives = 114/404 (28%), Gaps = 24/404 (5%) Query: 10 FYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 F + R +L P + + V + A+A GV+ G P + G+ Sbjct: 10 FQLTVAAGDREELLRAPAALAPEAGREARVGEVSLAAEAFGVRPGMPLGEALARCP--GL 67 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATV 127 + AD R++ LE + VE A G+ T + A Sbjct: 68 ALVPPDPAGVADAWERLLVRLESIGAAVEPERPGLACFQAQGLVRLHGGT--LERVLAAA 125 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI 187 +G ++ AA R + L + R ++ LPV + G Sbjct: 126 RTALRHPARIGTGPSRF----CALAAATRARARKPQIVLGDERTARDYLAPLPVALLRGR 181 Query: 188 GR--RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ 245 + + L +G++T+ +LA + F +G P + Sbjct: 182 EETAALPEPLARLGVETLGELAQLPRAAVADRFGAPGLLAWELAQGRDGALRPRELPERI 241 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYG 305 E T + A+ R + + + R + Sbjct: 242 EEELELPEALAGT---QLDHALGLLVDRLLARRERDGRTLRAVVLAATLVEG------GT 292 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNA 365 V D + A T L + R + V G S Q +L D+ Sbjct: 293 WREQVPFREALADPARMRLALTPRLALLPAPAERLRLTAVRFGAVASD---QRSLLDEAE 349 Query: 366 PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSP 409 + V A L + +RA+L+P Sbjct: 350 TARRARLREGVRQARAAAGPDAALRVLAVDPDSRVPERRAVLTP 393 >UniRef50_Q6BM10 DEHA2F09196p n=2 Tax=Debaryomyces hansenii RepID=Q6BM10_DEBHA Length = 770 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 43/135 (31%), Gaps = 24/135 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D+NAF+A E V PVV +IA + A+ G+ D + Sbjct: 44 VVAHVDLNAFFAQVEQVRLNLTADDPVVCA--QWQSLIAVSYAARKFGIGRMDTIQSARQ 101 Query: 61 LFRR----CGVVCFSSN------------------YELYADMSNRVMSTLEELSPRVEIY 98 V + + Y S ++M+ E VE Sbjct: 102 KCPNIIIAHAAVFKKGDSYWSYIRGLPDRSVHKVSLDPYRRESRKIMNIFREYCDLVEKA 161 Query: 99 SIDEAFCDLTGVRNC 113 S+DE F D + Sbjct: 162 SVDECFLDFGRMIYY 176 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 35/282 (12%), Positives = 90/282 (31%), Gaps = 22/282 (7%) Query: 106 DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 D V + E+R V + T G+ + K +AK+A K + Sbjct: 239 DWDDVCMLIG-SQLLYEVRQQVFEELGYTTSGGLGKNKIIAKIAGGFLKPDNQ------T 291 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISK-KLDAM----GIKTVLDLA-DTDIRFIRKHF- 218 + + + D G+G + + + + ++ + + + I+K F Sbjct: 292 IIRTCSMNNFLKNFQLIDFNGMGGKTGDVIMQRLEVPPDVNSISFIRNNFSLEDIQKEFA 351 Query: 219 --NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF--GERITDYPSMRQAICSYAARA 274 + ++T + +RG +L + ++ ++F + + I +A Sbjct: 352 NDPPLAQKTYQMVRGNYRQELS-LRTEIKSMMSRKNFLSKNPVNNIHDAYDWIKVFAGDL 410 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALN-EPYYGNSASVKLLTPTQDSRDIINAATRSLDAI 333 +L +S ++ S + + + S+ + RSL+ + Sbjct: 411 YGRLIELDDESLNLSMSQESRRGKGYIRRPKTISIQISSTSYVKHSKQMQLTIVRSLEKL 470 Query: 334 WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 + + L D L + + + +++ Sbjct: 471 -KENMEVTGLRL-LMDILDNSTNVHKLNNGISLKELDKKIDK 510 >UniRef50_Q6A779 Nucleotidyltransferase/DNA polymerase involved in DNA repair (UmuC) n=3 Tax=Propionibacterium acnes RepID=Q6A779_PROAC Length = 530 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 60/402 (14%), Positives = 113/402 (28%), Gaps = 29/402 (7%) Query: 19 RPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA 78 R P+++ G VI A A GV G + V + Sbjct: 28 RLHPGDAPLMIAD--RGVVIDCCARAAEEGVIPGLRVRAAQLRCPEG--VVVPYDSASEE 83 Query: 79 DMSNRV-MSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL-TVG 136 + + V + ++P V + A GV E VL VG Sbjct: 84 VLFDEVVREIEKSVAPSVHVVRPGVAAVAARGVARFYGDEVAAAERMVNVLTHIGYSHVG 143 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR---ISK 193 V +A A++A + R ++ V + GR + + Sbjct: 144 VSVADGLFAAEVAATD---NSGEGKRAPVFLASGTSRAFLAPYDVSVLARTGRADGELVR 200 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 L +G+ T+ AD D + + + F +R RG L P + F Sbjct: 201 TLRQLGLTTMGAFADLDRQHVVQRFAGAGQRAHDWARGMDVTMLSSRRPQDDD-AMEVVF 259 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 + + + +L + C + ++ + Sbjct: 260 DDPEPSGAQVVAKVRPVVEEFMTRLAETGRVCSQVRILLRATTGFSEH---------TWR 310 Query: 314 TPTQ-DSRDIINAATRSLDAIWQ-----AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 P Q D++ +R L + + + ++GV + Sbjct: 311 QPWQFSGDDLLARLSRQLSDLPRGTDEFGADEFCQSGVQAVRIVPTIHRAGEAAEGLFGA 370 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSP 409 +E L+ V+ L + G + + + R L P Sbjct: 371 RPTEHLVHVISQLQERLGPEGVLVG-EVAGGRMLKDRRRLVP 411 >UniRef50_Q2SJZ5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SJZ5_HAHCH Length = 432 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 49/366 (13%), Positives = 107/366 (29%), Gaps = 25/366 (6%) Query: 40 RNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYAD--MSNRVMSTLEELSPRVEI 97 N A GV G L V+ + Y +R S + + Sbjct: 3 ANTSASRSGVDSGMLLNTAFCLCPALRVL----RIKSYKQTQAIHRTAQVASRFSSWISL 58 Query: 98 YSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ 157 D + ++ ++ R+ +TV A A L Sbjct: 59 DEPDGLYLEVASMKRLYTNPSQLRQAIQQAFSTFKITVLSATAPHPKAAHLLAR------ 112 Query: 158 RQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKH 217 G+ N E + + L +D + + RI KL +G+K++ D+A + Sbjct: 113 ---SGIERDVNAESFWRTLKRLKLDRL-NLESRIEYKLRKVGLKSIYDIAKLPSCDLAYR 168 Query: 218 FNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 +V L + G + F+P + + + + Sbjct: 169 IDVDLALYLDHALGRKPWRPSPFSPPRH-FKKRLDLEQEFESLQPLLFYLAKVVKEFCLF 227 Query: 278 LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 L+ C+ + + ++ +++L + +SL+ I Sbjct: 228 LQERCLTCQSLEVRL------IHRHQTPTQENIRLAQGDNRPESWLYILNKSLERIELT- 280 Query: 338 HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 + F + LF +E+ +++ L A+ G ++F Sbjct: 281 APVIMIELFASHFEAAPQQSEYLFAHFNENIAAEK-TRLLNRLTARLGSDRVHFLNLTTD 339 Query: 398 QQWQMK 403 + +++ Sbjct: 340 HRPELR 345 >UniRef50_A3ZPQ4 Putative uncharacterized protein n=2 Tax=Planctomycetaceae RepID=A3ZPQ4_9PLAN Length = 511 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 56/364 (15%), Positives = 106/364 (29%), Gaps = 22/364 (6%) Query: 33 NDGCVIARNAEAKALGVKMGDPWFKQKDLF-RRCGVVCFSSNYELYADMSNRVMSTLEEL 91 V N A++ GV+ G P + + L R + E ++ E Sbjct: 43 QGELVRYCNRTARSRGVRSGMPISEVRSLARPRDLLQSEPWRAEDDKLALQQIALRCERF 102 Query: 92 SPRV--EIYSIDEAFC-DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 S + E E D+TG+ + E L + L + +A T +A Sbjct: 103 SFCIGLEDAEPPECLLLDVTGIAHFFGDEQTLAEQLGQSLAKRRLDGRIAVADTVGIAWA 162 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLAD 208 H + K + LP++ + + KL +G+ T+ + Sbjct: 163 GAHFLAHAGQPAVI--------ASGKRLEVLPIEALR-LPEATLHKLHRLGVTTIGQVLA 213 Query: 209 TDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAIC 268 D + K L + + G+ + P + + E IT + Q Sbjct: 214 LDRASLAKRCGKSLLMRLDQWSGQLPEMITPCRPLPK-FQVDQRLEEGITQPAPLEQLWQ 272 Query: 269 SYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 R L R + + S++L D R + R Sbjct: 273 LLLKRLLGLLTPRRLGVRQLLCLVNMEN------RQTWETSLRLCEAVADERRLGEL-LR 325 Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 + + + + AQ + + QL ++D L+ + G Sbjct: 326 LKLEKLRLTAPLVRMTLDASEVAPLSAAQQDWLAGRSQDEAR-QLAKLVDRLSCRLGDQA 384 Query: 389 LYFA 392 + A Sbjct: 385 IGVA 388 >UniRef50_C1G404 Putative uncharacterized protein n=3 Tax=Paracoccidioides brasiliensis RepID=C1G404_PARBD Length = 803 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 12/121 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D + FYAS P L P+ V V+ N EA+ G++ + K Sbjct: 21 VILHFDYDCFYASVFEAENPALKSLPLAV--QQKQIVVTCNYEARRRGLRKLQLIKEAKR 78 Query: 61 LFRRCGVVCFSS-NYELYADMSNRVMSTL-------EELSPRVEIYSIDEAFCDLTGVRN 112 + VV + + D S + L RVE DE F D+T + + Sbjct: 79 VCPD--VVIVPGEDLTKFRDASKEIYLFLKGFVGVERGWGGRVERLGFDEVFLDVTSLVD 136 Query: 113 C 113 Sbjct: 137 Y 137 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 36/233 (15%), Positives = 67/233 (28%), Gaps = 64/233 (27%) Query: 110 VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK-WQRQTGGVVDLSN 168 + + IR + Q T VGI+ +K LAKLA + K Q ++N Sbjct: 233 YQRLILGSHLASYIRHKLEQHKSYTATVGISTSKLLAKLAGNFHKPQNQTTLLPPYSVAN 292 Query: 169 LE------------------------RQRKLMSALPVDDVWGIGRRISKKLDAM------ 198 + + + + V GIG +I++KL A Sbjct: 293 NDSNNSKPNTAATDDASEPGQEAQGSNITRFLDDHDISAVPGIGFKIAEKLRAHVLGRKP 352 Query: 199 ---GIK---------TVLDLADTD---IRFIRKHF-----------------NVVLERTV 226 GI TV D+ + + + + Sbjct: 353 LGSGIYDQLPSEDRVTVRDVRLYPNMGPPLLDEILLSSNSSSSGGGGGSSLPRDIGPKIW 412 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGER-ITDYPSMRQAICSYAARAAEKL 278 + G + E +I S+G + +R+ + + A ++ Sbjct: 413 GLINGVDPSPVAEARDVPTQISIEDSYGHGQLAGLDVVRKELLALARSLVRRM 465 >UniRef50_Q14N03 Putative dna polymerase iv c-terminal truncated protein n=1 Tax=Spiroplasma citri RepID=Q14N03_SPICI Length = 90 Score = 104 bits (258), Expect = 8e-21, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 3/88 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-CVIARNAEAKALGVKMGDPWFKQK 59 + D+N+F+ASC V P L GKP+VV +++ V N EA+ LG+ P +K K Sbjct: 3 VIFHIDMNSFFASCHQVANPHLQGKPLVVANSSRQAVVTTANYEARQLGINSPMPLYKAK 62 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMST 87 ++ + ++ LY D + ++ + Sbjct: 63 EIC--HHLEIVKQDFGLYVDFAQKLFNF 88 >UniRef50_C5BVF2 DNA-repair protein n=2 Tax=Micrococcineae RepID=C5BVF2_BEUC1 Length = 562 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 49/378 (12%), Positives = 97/378 (25%), Gaps = 29/378 (7%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 P+ V + + A +A A++ GV+ G + L +V + Sbjct: 43 PAHAPIAVHDSR--VLTAVDARARSQGVRRGMRRRTAQGLCPDLELVAM--DEGRDVRAF 98 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-FGREIRATVLQRTHLTVGVGIA 140 V+ +E + VE+ G + + TV VG+A Sbjct: 99 EPVVQAVEGVVAGVEVSRPGLVVLAAGGPSRYVGTEEALAELLVGTVADEAGTECQVGVA 158 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG---------RRI 191 + + ++ PV D+ + + Sbjct: 159 DGLLA-----------ALLAARDGLIVPPGTSAEYLAGRPVRDLLHVATTRESHARLADL 207 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 S L +GI T+ A + F V + R RG + P + Sbjct: 208 SDLLRRLGIGTLGAFARLRAGDVLARFGDVGTQGYRLARGLDARPVSVRRPEPD-VTVRA 266 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 + A A +L C + +T + + + Sbjct: 267 DLDPPAARLDTAAFAARRLAEDLQNRLLRRGAVCARLRVLARTEGGSELVRTWRIDGAAT 326 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 T R + + + ++ + G AQ L+ + G + Sbjct: 327 ATELTDRVR-WQLEGWLNGRSGQAPSAPLVRLELVAEEVTPAGTAQDGLWGRRS--RGEQ 383 Query: 372 QLMTVMDTLNAKEGRGTL 389 Q + G + Sbjct: 384 QAGRAALRVQGLLGSSQV 401 >UniRef50_B5BUV4 DNA polymerase eta n=4 Tax=Agaricales RepID=B5BUV4_COPCI Length = 641 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 83/265 (31%), Gaps = 17/265 (6%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + R VL++ + G+A+ K LAKLA K + + + Sbjct: 266 AAGMVMKARKGVLEQLGYSTSAGLARNKFLAKLAASYRKPFGQN------ILRNAAIPNY 319 Query: 176 MSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 + + + +G ++ + L TV DL + ++ F LRG Sbjct: 320 LIPMAFQKIRFLGGKLGRALAQEYDAATVGDLLSISLDEMQNKFGEDSIWVYEILRGIDR 379 Query: 235 LQLEEFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE-----HQYCRFI 288 ++++ T + ++ S++ + IT I AA A +L + + + I Sbjct: 380 SEVKDKGTTLTKSMLASKNLPKPITAASEGYHWIRVLAAELALRLNEARQISPNLWPKNI 439 Query: 289 STFIK--TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 + + + + V + T + + + + + G+ Sbjct: 440 VLHARKGYESSRSKQAVFPFTREVTVDTVAAAGDKLWKELVGNATTMKISSVQLSFTGID 499 Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSE 371 + + F P Sbjct: 500 VS--EPGQQSIEGFFKSKPPSKRQR 522 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 49/135 (36%), Gaps = 25/135 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + LCD +AFYA+CE V P+VVL +IA N A+ G+ D Sbjct: 46 VVGLCDSDAFYAACEMVRLGVDKDTPLVVL--QWDSLIAVNYPARKYGISRMDKKKDALK 103 Query: 61 LFRRCGVVCF---------------------SSNYELYADMSNRVMSTLEELSP--RVEI 97 VV + + Y S ++ + EL P VE Sbjct: 104 RCPHLKVVHVATYKEGEKEPGYWDNVDTNTHKVSLDYYRRESMKIAALFRELLPGCEVEK 163 Query: 98 YSIDEAFCDLTGVRN 112 SIDEAF D T Sbjct: 164 ASIDEAFIDFTKPVR 178 >UniRef50_A5DE10 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DE10_PICGU Length = 673 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 24/141 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D+NAF+A E PVV + +IA + A+ G+ D ++ Sbjct: 43 VIALVDMNAFFAQVEQTRLNLSIDDPVVCV--QWSTLIAVSYAARKYGINRMDNVKSARE 100 Query: 61 LFRR----CGVVCFSSNY------------------ELYADMSNRVMSTLEELSPRVEIY 98 V N + Y S +++ +++ VE Sbjct: 101 KCPDVILAHAAVFKKGNPYWSYVDGLPNQAEHKVSLDPYRRESRKIIKIIKQHCDVVEKA 160 Query: 99 SIDEAFCDLTGVRNCRDLTDF 119 S+DE + DL + R L +F Sbjct: 161 SVDECYMDLGREVHKRLLLEF 181 Score = 71.3 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 65/202 (32%), Gaps = 22/202 (10%) Query: 106 DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 D + +IR + T GIA+ K LAKLA K + Sbjct: 239 DWDDICVLIGA-QVLYKIRKLIYDELSYTTSGGIARNKFLAKLAAGFNKPDNQ------T 291 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKK-LDAM----GIKTVLDLA-DTDIRFIRKHFN 219 + ++ +DV G+G + L G+ + L + ++ I+K + Sbjct: 292 IIRSASIPNFLTNFQFNDVSGMGGKTGDTVLARFDTPPGVNSFTHLRENYTLQDIQKEYP 351 Query: 220 VV---LERTVRELRGEPCLQLEEFAPTKQEIICSRSF--GERITDYPSMRQAICSYAARA 274 ++ +RG+ L + ++ ++F + + + YA Sbjct: 352 QDPQFAQKIYDIVRGDDKQPLRLRTDV-KSMMSRKNFIPQRPVKTLFDIFSWLKVYAGDL 410 Query: 275 AEK---LRSEHQYCRFISTFIK 293 + L E+ S K Sbjct: 411 HNRFIDLDDENMNLSMSSVSHK 432 >UniRef50_A2SG06 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=A2SG06_METPP Length = 466 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 59/377 (15%), Positives = 111/377 (29%), Gaps = 25/377 (6%) Query: 33 NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 ++ N A ALGV+ G L + +V F + A + R+ L L+ Sbjct: 3 EQHMLLGANRAAHALGVRAGQSVATALSLLPQ--LVVFPRDRPREAALVERLALALAALT 60 Query: 93 PRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK--LAN 150 P D ++ + + + + V G A T A + Sbjct: 61 PH-LSLIPDGVLLEVQSTLRLFGGIHALLHRAQALARTSGVQVRTGCAPTPGAAWLFATS 119 Query: 151 HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTD 210 A++ Q + L LP S+ L A+GI+T L Sbjct: 120 GLARRHALQARSSAQQLDRLPVASLARLLPPSL------HQSELLQALGIRTFRALRALP 173 Query: 211 IRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 +++ V L R + G+ F P + + R +R + + A+ + Sbjct: 174 RAGLQRRLGVDLGRALDRCYGDAPDPRPWFVPPEHFLAR-RELLQRADEAAVLMAAVEAL 232 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 L+ Q ++ ++ P ++L P++D + L Sbjct: 233 LPALRGWLQLRWQAVTVLALRLRHEHGRE--PCPDTRLRLQLSAPSRDIAQLALLWRERL 290 Query: 331 DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 A + + L G L + G ++D L A+ G + Sbjct: 291 QRHVLA-APVYELALELEAAVPHGGTPGELLPGPGRQDGEHA--ALLDRLTARLGSDHVR 347 Query: 391 FAGQGIQQQWQMKRAML 407 W + Sbjct: 348 R--------WVPRADHR 356 >UniRef50_B9PWD1 DNA polymerase eta, putative n=3 Tax=Toxoplasma gondii RepID=B9PWD1_TOXGO Length = 1091 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 9/115 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FY E +P+VV IA N A+ LG+K GD + Sbjct: 14 VVVHLDLDCFYCQVEHRRLGIPVSEPLVV--RQWNLAIAVNYAARRLGIKRGDLCTVLEK 71 Query: 61 LFRRCGVVCFSSNYE-------LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT 108 F ++ S + Y S+ V+S + E P VE SIDE F DL+ Sbjct: 72 KFPNLHIIHVPSRPDTDKVSLERYRLASDEVLSIIVEQYPCVERASIDEVFIDLS 126 Score = 51.7 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 40/273 (14%), Positives = 83/273 (30%), Gaps = 34/273 (12%) Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 T+ +A++K LAK A+ K ++ L E + L + D+ G + Sbjct: 330 FTMSGAVARSKFLAKTASAKFKPDRQ------VLVPSELAADFLGPLELRDLRGFRGKRG 383 Query: 193 KKLDAMGIK--TVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 +++ A V DL + + E L+G+ + + + ++ Sbjct: 384 RRIAAAFPDKPRVKDLREIPFDHLVTKLGREEAESLSNVLKGDLEGEGVKANLRVKSMLA 443 Query: 250 SRSFGERITDYPS-------MRQAICSYAARAAEKLRSE----HQYCRFISTFIKTSP-- 296 ++F D + + + E + + ++ + +T P Sbjct: 444 FKAFPPGAADPVQLAMNRGGLADWLSGLCLELFRRAEQEFSAYKRAPKTLTVYYRTGPPW 503 Query: 297 FALNEPYYGNS-ASVKLLTPTQDSRDIINAATRSLDAIWQAG----HRYQKAGVMLGDFF 351 F S L PT +I A +L + + K G+ + DF Sbjct: 504 FQQLSRSGPLSPRRKALAAPT--LEEIQRATLAALLRLSRDCGARLPPCVKIGLAVSDFE 561 Query: 352 SQG----VAQLNLFD-DNAPRPGSEQLMTVMDT 379 + F + R + D Sbjct: 562 NAELEATPRITQFFQVGVSERLKHRRGAAAQDA 594 >UniRef50_A1VVG9 DNA-directed DNA polymerase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VVG9_POLNA Length = 150 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 49/144 (34%), Positives = 68/144 (47%), Gaps = 4/144 (2%) Query: 281 EHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRY 340 + +S + T+PF ++ Y S +V L PT DSR I+ AA L I++ G Y Sbjct: 6 RQYWLSRVSWAVHTNPFRQHDTQYSRSLTVPLRWPTSDSRLIVQAALHGLQQIYRPGLNY 65 Query: 341 QKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI---Q 397 KAGVML AQ L P E LM MD +N + G GT+ A G Sbjct: 66 AKAGVMLLGLQHGPAAQHEL-ALGDDAPRLEALMAAMDRINERHGPGTVALASAGHFAEN 124 Query: 398 QQWQMKRAMLSPRYTTRSSDLLRV 421 + W M++A+ +P Y R SD+ Sbjct: 125 RIWSMRQALKTPDYMARWSDIPTA 148 >UniRef50_D1R480 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R480_9CHLA Length = 104 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AF+AS E + P L GKPV+V + G V + EA+A GV F+ Sbjct: 5 IIFHIDMDAFFASIEILRNPSLKGKPVIVGGSPDKRGVVSTCSYEARAYGVHSAMSLFEA 64 Query: 59 KDLFRRCG 66 K Sbjct: 65 KKKMPPRH 72 >UniRef50_Q7MLY1 Uncharacterized protein conserved in bacteria n=18 Tax=Vibrionales RepID=Q7MLY1_VIBVY Length = 467 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 49/389 (12%), Positives = 119/389 (30%), Gaps = 26/389 (6%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+ V+ V+ N A G+ +G L + V+ + +L + Sbjct: 25 PLAVVHPQSHQVVQINDLASNAGLAVGMGLASAATLCSQLQVIV--YDEKLEHRKLKEIA 82 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 L ++ + + + ++ + N D + L ++ + Sbjct: 83 QWLYFMTADLVLDPPSGLWVRVSHMLNLYQGLDNYWHTLSAHLATLAVSYHASTGFSPLS 142 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD 205 AKL A + N + P+ + +KL +GI T Sbjct: 143 AKLLAKAGHP--------LISDNQTELLTKVKKHPLT-FSELKATTIEKLQRIGIHTFDA 193 Query: 206 LADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 L ++ + + F++ L + +L G+ ++ + P + + + + + Sbjct: 194 LLTLPLQELARRFDIELVNYIGKLTGQLKHPVDFYHPPSR-FKQELELLFELDNVQWLEK 252 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS-ASVKLLTPTQDSRDIIN 324 + + L ++ + + F N+ S S + +Q + + Sbjct: 253 PLEKLFRQLESYLTIRNKTAHELQLTL----FQRNDLSKAISFHSAQGEYRSQQWQKLSA 308 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKE 384 S + + + +LF + +L ++ L AK Sbjct: 309 LTLEST----ILQAPVTRLQLEVIREGEPNAHPTDLFSHRTGQLSRLELYSL---LQAKL 361 Query: 385 GRGTLYFAGQGIQQQWQMKRAMLSPRYTT 413 G ++ A G+ + ++A T Sbjct: 362 GADSI--ATLGLNHDPRPEKATRYQSTLT 388 >UniRef50_A9AEV1 Nucleotidyltransferase/DNA polymerase n=45 Tax=cellular organisms RepID=A9AEV1_BURM1 Length = 495 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 51/367 (13%), Positives = 99/367 (26%), Gaps = 13/367 (3%) Query: 33 NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 G V+ +A A+ GV+ G L +V + AD V L S Sbjct: 35 EQGVVLIADAAARRQGVRAGMKRGGVLTLAPDTQLV--ERDPAREADALRAVALALLRFS 92 Query: 93 PRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA 152 P V + D+ L + A T A L A Sbjct: 93 PNVALADEATLVVDVGPSLRLFGGLPSLCRQVRATLAALGYAARMSAAPTAGGAWLLARA 152 Query: 153 AKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR 212 + ++ + + ALP + R + D +G +T+ DL + Sbjct: 153 ----SARVRSRRRVARRASLVRALDALPCVLLPD-ARPYAGWFDGLGCRTLADLRGLPRK 207 Query: 213 FIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAA 272 +++ L + G+ L A ER+ ++ Sbjct: 208 GLQRRCGPALLAALDRAYGDAVEPLAWMAVPPV-FDVRLELAERVDYAEAVLFVARRLVV 266 Query: 273 RAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 + L + ++ ++ P S + P +D + L Sbjct: 267 QLCGWLAARQLSLAAMTFDLEHERGRQAVPP--TSLELAFAAPVRDEAHFMRLLGERLAR 324 Query: 333 IWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 + + S +LF + + +++ L A+ G + A Sbjct: 325 VELP-AAVIAVRLKATRVESVAPPADDLFPEPGGTKETRA--RLLELLVARLGAENVLCA 381 Query: 393 GQGIQQQ 399 + Sbjct: 382 APVADHR 388 >UniRef50_B8CNV0 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CNV0_SHEPW Length = 527 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 62/421 (14%), Positives = 132/421 (31%), Gaps = 55/421 (13%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV 95 V+A ++ ++ GVK+G + L +V F + S+ + E S RV Sbjct: 37 QVLALDSLSEQAGVKLGMSLSTAQSLMPSAMLVEFDATIS--QQASDWLCQWSYEFSARV 94 Query: 96 EIYSI-----------------DEA-----FCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 DE +++ + + D E + L Sbjct: 95 VPLRCSLSNEDQKKTSKIKLDVDEFVSNTLLLEVSSMALIFNGIDKLIEQYRQRAKALGL 154 Query: 134 TVGVGIAQTKTLAKL-ANHAAKKWQRQTGGVVDLSNLERQRK-----LMSALPVDDVWGI 187 V + +A+T A+L A HA+ + Q+ S+ + L++ LP+ + + Sbjct: 155 EVSLALAKTPLAAQLLACHASMENQQAKLATEVFSSNDYLNTDKTLLLLNQLPIALLP-L 213 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 + + L +GIK+ L+ + + + F L + + ++ G L P + Sbjct: 214 SDFLKQSLHDIGIKSFASLSALPDKELGRRFGSKLLQLLAKISGRLPQPLSYVEPEE-SY 272 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 + + + + A L+ + + + + Sbjct: 273 QQKLTLLHEVELMQGIVFPLGRMLKEMASYLQLRQLAIQKLKLSLIYRD--SDRSQLDIV 330 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD--NA 365 DS ++N L+ + + + + F V F A Sbjct: 331 IHYPFAEHRSDS--LLNLCRMQLERVTLY-QPVVEMVIHVDKFVPIAVNHDCWFGQQKAA 387 Query: 366 PRPGSEQLMTVMDTLNAKEGRGTLY----FAGQGIQQQW------------QMKRAMLSP 409 SE+ +M L A+ G+G + + + W +++ LS Sbjct: 388 QGQRSEKTQRLMALLEARLGKGKVKGLQASSAHLPEDSWMATELSVTAKEQSIRQQRLSE 447 Query: 410 R 410 Sbjct: 448 A 448 >UniRef50_B5EJ93 Putative uncharacterized protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJ93_ACIF5 Length = 470 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 55/379 (14%), Positives = 107/379 (28%), Gaps = 29/379 (7%) Query: 14 CETVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 E R + ++ ++ NA A G++ G + + + Sbjct: 13 VELRERVQAEAAALALVDMQGSAGTLLQVNATALQAGLRTGMTTARALAMLPELQLCTR- 71 Query: 72 SNYELYADMSNRVMSTLEELSPRV---EIYSIDEAFCDLTGVRNCRDLTDFGREIRATVL 128 + + L L+PRV E S A D++G R ++ A Sbjct: 72 -DPAAEVQALSHWARLLYSLAPRVVLLEEMSPALA-VDISGNTRLRQDDTLL-QVVAAWA 128 Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG 188 T L+V G+A T A L +WQ L +P+ + Sbjct: 129 AATRLSVRTGVAPTPLGAALLA----QWQGAGSRSGSCLEPTDWALLWPQIPITLLP-CA 183 Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG-EPCLQLEEFAPTKQEI 247 L A+G++ L D + + + L G + P E+ Sbjct: 184 VATRAALLALGVRHCAQLQALDRADLVRRLGPESLHVLDRLSGRIDDPRPALSFPVDPEV 243 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 + I + +R A+ LR++ Q R + S Sbjct: 244 S--IPLYDEIRHWEGLRFALHRALQDLQLLLRTQAQASRSWLLQL-------QGRERQWS 294 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 +++++ PT + ++ L + Q + D Sbjct: 295 STLEVRDPTTNVETLLTLWQWRLQQ-QPLDFAVHTLHLQALAPQHWPGRQATWWQDGVEE 353 Query: 368 PGSEQLMTVMDTLNAKEGR 386 +++ L + G Sbjct: 354 ARW----QLVEQLRQRLGD 368 >UniRef50_B8KRW4 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KRW4_9GAMM Length = 474 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 55/367 (14%), Positives = 114/367 (31%), Gaps = 22/367 (5%) Query: 25 KPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRV 84 +PVVV VI N A GV+ + L + A M ++ Sbjct: 23 QPVVVFDRER--VICANDPALERGVRPQQNTATVRSLLNEEQGHLLERDTTAEATMLKQL 80 Query: 85 MSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKT 144 ++ ++P + IY D ++ G D ++ L + ++ + IA+T+ Sbjct: 81 LAWGYGITPTLMIYRDDCLLLEIGGSLTLFHGLDTLLDLIRQALLQRQVSCAMAIAETQP 140 Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVL 204 A L HA + L + + LP+ + +I+ + GI+ Sbjct: 141 GAWLLTHA--------EPTLALDCRRPLNERIGVLPIALIPDFTHQITG-FERAGIRYFS 191 Query: 205 DLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 +L + + L R + +L G + + P + FG + + Sbjct: 192 ELLALPAAALGRRGGEELLRWLDQLTGRREIPPVDHQPPS-TFRDALWFGFEVRQQQELH 250 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 A+ + L + + + L + +V+ Sbjct: 251 PALKTLLQGFCRFLTHTQLDTQTVDWQL------LRMSGDAQTLTVRSSEAHARWETWFE 304 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKE 384 + LD + A + + + +LF++ E L + D L + Sbjct: 305 LSCLRLDQLTIA-RDIEGVALAVDHLQPNQPLASDLFNNA---RNEEPLNNLTDRLRGRL 360 Query: 385 GRGTLYF 391 G + Sbjct: 361 GLRAVTR 367 >UniRef50_C8RUC9 DNA polymerase involved in DNA repair n=2 Tax=Corynebacterium jeikeium RepID=C8RUC9_CORJE Length = 610 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 88/313 (28%), Gaps = 21/313 (6%) Query: 14 CETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 + R P V+++ V+A NA A+A G+++G + + V + Sbjct: 31 VQAQSRGWDVLAPAAVIADYR--VLACNAAARAQGIRIGMKQRHALAAYPQLNVAA--DD 86 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 A + V++ L+++S VE + + E R H Sbjct: 87 PTRQASVHEDVLAALQDVSAVVETLRPGLLAFPVDALARYYGDEANAVEKLLDAAARLHA 146 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW-----GIG 188 G+A A A K + + ++ LP+ + Sbjct: 147 DCLAGVADDLVSAVWAARLGKS-----------IPVGGGAEFIAGLPISVLSIEPELRAP 195 Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEII 248 +S L +G++T+ D A + F R G + + + Sbjct: 196 AHLSATLQQLGLRTMRDFAGLPRADVAARFGQEAVEWHRIASGHVDRDVAPRRQRED-LE 254 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 E I + A KL + + C ++ P Sbjct: 255 LRYEADEPIARTETAAFIARHVATALHNKLFAAGEACLRLAVRAYLEPPVGYTGPTVIER 314 Query: 309 SVKLLTPTQDSRD 321 + P + Sbjct: 315 LWRCREPLSEQDT 327 >UniRef50_B4VGM9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B4VGM9_9ACTO Length = 380 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 65/198 (32%), Gaps = 9/198 (4%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGI 139 V+ L E SP V+ A + G + IR + R V +G+ Sbjct: 20 RAVLELLREFSPLVQALPPRAALVQVRGAQRYFGVDPERIAEVIRLRAVARLGTDVRIGV 79 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A T +A +A+ G V ER + + LPV++++G+G R ++ L G Sbjct: 80 AGTWAVAAMASAR-----IPGPGGVLAVPGERVAEFLGPLPVEELYGLGSRQAEALRGYG 134 Query: 200 IKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 + TV L + + + V RG + F Sbjct: 135 LHTVGALTEVPPGVVERILGRRAGRVVVERARGIDPRPVTPRDLPS-SAAVRSRFAREEL 193 Query: 259 DYPSMRQAICSYAARAAE 276 D P R + R Sbjct: 194 DGPHARAELLGLVVRLGA 211 >UniRef50_C5BND7 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BND7_TERTT Length = 513 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 47/393 (11%), Positives = 103/393 (26%), Gaps = 51/393 (12%) Query: 33 NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 V+ + A A G++ G P + L ++ L N + L + Sbjct: 35 QKQRVLCASKPAVADGIRAGMPAATAQLL---GQHQQVERDFALETTALNALADRLYMFT 91 Query: 93 PRVEIYSI-----DEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 P + +++ E L T + +G+ T A Sbjct: 92 PHLTPLQPAAHLQAGILAEISRSLALFKGLTTLVEQLKENLADTGYELALGLGHTDLCAW 151 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK------------L 195 L + + Q + ++ L V V +G + L Sbjct: 152 LLSWSPTPQPIQHYTQ---------SQFIAQLDVMPVRQLGECHCAQLPYTQLQNRIDDL 202 Query: 196 DAMGIKTVLDLA----DTDIRFIRKHFNVVLERTVRELRGEPCL--------QLEEFAPT 243 + G T+ DL + + +R+ + + ++ G Sbjct: 203 EKSGFNTIADLTRQIGNQNTSSLRRRWGGEFCGLLSQVLGIEHSLQQTRLFATPLPQYQP 262 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 +Q S F + + Q + L ++ C+ + + Sbjct: 263 EQFFYDSIQFDYPLQTVEQLLQPMEYLLNNLQRYLNNQQLQCQKVEWLLFDIYHNKQTFK 322 Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL-FD 362 +S + D+ ++ + L+ + ++ D F L F Sbjct: 323 VHSSHAQ------NDAALLLELSRIQLETQSLS-FEVDTVELICRDTFKHTPNTDPLGFT 375 Query: 363 DNAPRPGSEQLMTVM--DTLNAKEGRGTLYFAG 393 + + L A+ G L+ Sbjct: 376 QHESNAREMAHDFAIVTAKLKARLGDQALFKVA 408 >UniRef50_C5JEX9 Sister chromatid cohesion protein n=2 Tax=Ajellomyces dermatitidis RepID=C5JEX9_AJEDS Length = 757 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 86/262 (32%), Gaps = 19/262 (7%) Query: 106 DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 D V D R +RAT+ +R T GIA+ K +AKL + K ++ Sbjct: 309 DWDDVCMLIGA-DIVRSVRATIWERLKYTCSAGIARNKMMAKLGSACNKPNKQ------T 361 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHF-NVVLE 223 + ++ + + +G ++ K++ A G V L + +R + Sbjct: 362 IVRNRAVQQFLGGFKFTQIRMLGGKLGKQVAAIFGTDEVGGLLHVPVEQLRLKLGDDTGT 421 Query: 224 RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 LRG ++ + ++ ++SF I + + + A +L E Sbjct: 422 WLYELLRGYEYSEVS-VRTQIKSMLSTKSFRPGIQSSTQAEKWLRIFVADIYGRLLEEGV 480 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD---IINAATRSLDAIWQAG--H 338 + + ++ G + S ++ PT + + A L + G Sbjct: 481 ----LENKRRPKVITIHHRTAGQTRSRQIPIPTGRPITDTFLFDLAKTLLAQVVNEGNIW 536 Query: 339 RYQKAGVMLGDFFSQGVAQLNL 360 + + F L Sbjct: 537 PCANLSLNVSGFEDGVTGNQRL 558 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 2/70 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CE V +P+ V +IA N A+A + + + Sbjct: 85 IIAHIDLDAFYAQCEMVRLNTPRTQPLAV--QQWESLIAVNYAARAFNITRMLTAAEARK 142 Query: 61 LFRRCGVVCF 70 + Sbjct: 143 RCPQLVTQHV 152 >UniRef50_Q38C71 DNA polymerase eta, putative n=4 Tax=Trypanosoma RepID=Q38C71_9TRYP Length = 525 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 67/438 (15%), Positives = 128/438 (29%), Gaps = 102/438 (23%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D++ FYA E V D +P V+ + G +IA N A+ G+ D + Sbjct: 4 IAHIDMDCFYAQVEAVRLGVDCRTEPYVL--SQWGNLIAVNYPARKFGIGRFDTVTDALE 61 Query: 61 LFRRCGVVCF---------------------SSNYELYADMSNRVMSTLEELSPR-VEIY 98 + E Y + S ++ L+ VE Sbjct: 62 KCPHVKISHVATYAAGEVEYRYHENPSKQTHKVALEPYREASRKIFRILDSFDGVEVEKG 121 Query: 99 SIDEAFCDLTGVRNCRDLT-DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ 157 S+DEAF D+T + + L+ + I A++A K+ Sbjct: 122 SVDEAFLDVTKAAHMKQGEMGLLSSQGELRLEDVADPTTIVIPS--RQAEIAAWL-KEHG 178 Query: 158 RQTGGVVDL-SNLERQRKLMSALPV--DDVWGIGRRISKKLD---AMGIKTVLDL----- 206 R+ V D+ + + + MS L VW I ++I +L + GI L Sbjct: 179 REFSDVFDVTLHPQPTAENMSLLAAASRVVWTIRQKIYDELRYDCSAGIAHNKLLAKSIS 238 Query: 207 --------------------ADTDIRFIRKHFNVVLE---------------RTVREL-- 229 D + IR E Sbjct: 239 ARHKPNQQTLLFPDCVASVMWDLPFKSIRGFGGKFGEVVRLACGGKETCREAWLHSLCAM 298 Query: 230 -----------------RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAA 272 RG ++ E + + ++ S++F + +++ + + Sbjct: 299 SKFFESVGDAEYAYRRLRGYDEGKIRERS-ISKSLMASKAFSPPSSTANGVQKWVTVLSG 357 Query: 273 RAAEKLRS----EHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 + + + + L++P + + L + +++AA + Sbjct: 358 ELSARYEDFCNTYGVKGHSFNVKL--GNRGLDQPSSVANKTFPLPELV-TPQTLVSAAMQ 414 Query: 329 SLDAIWQAGHRYQKAGVM 346 + AI VM Sbjct: 415 CVTAIMANRPGVVVNAVM 432 >UniRef50_Q04049 DNA polymerase eta n=8 Tax=Saccharomycetaceae RepID=POLH_YEAST Length = 632 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 42/142 (29%), Gaps = 34/142 (23%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D+NAF+A E + PVV + +IA + A+ G+ D + Sbjct: 26 IAHIDMNAFFAQVEQMRCGLSKEDPVVCV--QWNSIIAVSYAARKYGISRMDTIQEALKK 83 Query: 62 F----RRCGVVC----------------------------FSSNYELYADMSNRVMSTLE 89 V + E Y S + + + Sbjct: 84 CSNLIPIHTAVFKKGEDFWQYHDGCGSWVQDPAKQISVEDHKVSLEPYRRESRKALKIFK 143 Query: 90 ELSPRVEIYSIDEAFCDLTGVR 111 VE SIDE F DL + Sbjct: 144 SACDLVERASIDEVFLDLGRIC 165 Score = 64.0 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 85/300 (28%), Gaps = 53/300 (17%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + + IR ++ T G++ TK + KLA++ K + + + Sbjct: 241 GSQVCKGIRDSIKDILGYTTSCGLSSTKNVCKLASNYKKPDAQ------TIVKNDCLLDF 294 Query: 176 MS--ALPVDDVWGIGRRISKKL-------DAMGIKTVLDLADTDIRFIRKHFNVV----- 221 + + W +G + K+L IK + + + +++ + Sbjct: 295 LDCGKFEITSFWTLGGVLGKELIDVLDLPHENSIKHIRETWPDNAGQLKEFLDAKVKQSD 354 Query: 222 ----------------LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 E+ + RG L L K + G+ Sbjct: 355 YDRSTSNIDPLKTADLAEKLFKLSRGRYGLPLSSRPVVKSMMSNKNLRGKSCNSIVDCIS 414 Query: 266 AICSYAARAAEKLRSEH------QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 + + A +++ R +S +KT + + Y S V S Sbjct: 415 WLEVFCAELTSRIQDLEQEYNKIVIPRTVSISLKTKSYEV----YRKSGPVAYKGINFQS 470 Query: 320 RDIINAATRSLDAIWQAGH-----RYQKAG--VMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 +++ + + + G K + D +++F + S Sbjct: 471 HELLKVGIKFVTDLDIKGKNKSYYPLTKLSMTITNFDIIDLQKTVVDMFGNQVHTFKSSA 530 >UniRef50_C7R3Y5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3Y5_JONDD Length = 549 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 41/361 (11%), Positives = 91/361 (25%), Gaps = 38/361 (10%) Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 GV+ ++ + ++ A R+ L+ + + + Sbjct: 40 GVRTTMALRHAQETLPTLTCLPTPP-TDILAREHERIAQVLDSFLAHLTVLRPGLTLAPI 98 Query: 108 TG-VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL 166 G +R+ D F + + T + GIA A LA + + Sbjct: 99 DGALRHYPDPPTFLAAVTDAITDTTGIDPWAGIANGTLPAILAARRGR-----------I 147 Query: 167 SNLERQRKLMSALPVDDV------WGIGRRISKKLD---AMGIKTVLDLADTDIRFIRKH 217 + + P+ + ++ L +G+ T DLA I Sbjct: 148 LTPDESLPFIQTHPLHTLRYTTTAPTPDPELTDLLALWAKLGLHTYADLASLPPTDIATR 207 Query: 218 FNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 F G L + +I S +F E + + A++ E+ Sbjct: 208 FGARGMWAYHIAIGR-EEPLVSQDRNEPDITVSSTFDEPLHRADTAAFYAKQLASQLREQ 266 Query: 278 LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA----- 332 L + + +T+ + + I D Sbjct: 267 LVKQGLSAYELRVSARTN----ERILTRTWRADPTMVGALSEHAITQRVRWQCDGWLSAS 322 Query: 333 ----IWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 + G L+ + + +++ L++ G Sbjct: 323 AICPHTPKVGPLDMVELTAVRVIPAGHHHPTLWGADNTDNDHTR--RLVERLSSLVGPDG 380 Query: 389 L 389 + Sbjct: 381 V 381 >UniRef50_Q7R724 Putative uncharacterized protein PY07765 (Fragment) n=3 Tax=cellular organisms RepID=Q7R724_PLAYO Length = 707 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 81/288 (28%), Gaps = 18/288 (6%) Query: 16 TVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 P KPV+ S A GV G + + L G+ S + Sbjct: 427 RSRSPSP--KPVMAGSGWHSASAXA----AAQGVAPGMALSEAQALCP--GLTAVSRDPX 478 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTV 135 + + + +P + + ++ G V V Sbjct: 479 AEQRVLSHLAERCLRFTPWISLDFPATLQLEVRGSLRLFGGPARLAGAARQVCAADGHAV 538 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 G+A T A L A + E R ++ L + + GI ++S +L Sbjct: 539 QCGLAPTPMAAWLLARAGFPAP--------VLETEALRSVLGDLSIAAL-GIDDKLSGRL 589 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 G++ + DL + + + L R + E+ G L F + R Sbjct: 590 ARAGLRVLRDLWRMPRDGLARRYGSDLLRRLDEVVGSRPQPLGRFHAPPR-FRAERELAM 648 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 D + + + LRS + ++ A Sbjct: 649 ETEDLTRVFPLVEALLMEFEGFLRSRDAVAAGLELELRXVRAAPTRVC 696 >UniRef50_Q015X2 DNA polymerase iota/DNA damage inducible protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q015X2_OSTTA Length = 492 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 65/437 (14%), Positives = 121/437 (27%), Gaps = 93/437 (21%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+A E + L G P+ V G ++ A+ALG K D + L Sbjct: 23 VLHVDADAFFAQVEALRDERLRGIPIAV--RQHGDIVCVCHRARALGAKKHDDVDACRTL 80 Query: 62 FRRCGVVCFSSN--------YELYADMSNRVMSTLEELSPRV----------EIYSIDEA 103 G N YE Y MS + + L R+ E SIDEA Sbjct: 81 LENNGGKVIHVNTTAEHLVSYEPYTRMSYELHAKLHAACERLRLDGKGIVIYEKASIDEA 140 Query: 104 FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV 163 + + +C+ QR V VG+A+ K LA+ H Sbjct: 141 YVQIEHGSSCQSAARRSPSRFDGRFQRVRTRVSVGVARNKLLARSLPHCK---------- 190 Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF---NV 220 G + KL G+ T ++ + + + Sbjct: 191 ------------------------GELVRPKLTKHGLHTAWNVRSMNAKRLESLIGLAPK 226 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRS------------------------FGER 256 + G ++ + K + + Sbjct: 227 PALELCKAAHGVDDAEVIQRVNEKSSLSTQMTLTIKPRPMPRNVGGEVGVTGGPAGMFNP 286 Query: 257 IT--DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 +T ++ + + + EK++ Y + + ++ + S Sbjct: 287 LTCGEHDRIALTMTALTRELCEKIKVHELYTKRWPITMG-VKIKIHGTSVQYNRSAAFPV 345 Query: 315 PTQDSRD------IINAA--TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 ++ + + A L + Q V +F S + D+ Sbjct: 346 KFDNAMEENVPITMAKKATELAVLAVGQRKTEIIQHITVSASNFKSSTGEKEKTRDEI-I 404 Query: 367 RPGSEQLMTVMDTLNAK 383 ++ L + +N K Sbjct: 405 SAETDPLKKAISRMNEK 421 >UniRef50_C7CNB5 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CNB5_METED Length = 455 Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 67/159 (42%), Positives = 97/159 (61%), Gaps = 1/159 (0%) Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 + TV R + V VGI+ TKTLAK+AN AKK GGV L + Q ++ + + Sbjct: 45 RRQRTVSGRCEIPVCVGISTTKTLAKVANRTAKKDPLS-GGVCYLPDEASQTAALAKMEL 103 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 DVWGIGR ++ L A+ I + L L D + IR+ FNVVL+RTV EL+G PCL LE+ + Sbjct: 104 GDVWGIGRGLAPPLAALSITSPLKLRDANPTRIRERFNVVLQRTVMELQGTPCLDLEQDS 163 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 P + I CSRSF + + + +A+ +Y + AA+K+R+ Sbjct: 164 PDSKTICCSRSFARAVEGFDELAEALTAYTSYAAQKMRA 202 >UniRef50_C5DLU3 KLTH0G03586p n=2 Tax=Saccharomycetaceae RepID=C5DLU3_LACTC Length = 621 Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 53/397 (13%), Positives = 100/397 (25%), Gaps = 78/397 (19%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A DVNAF+A E + PVV + +IA + AK G+ D F Sbjct: 26 VAHIDVNAFFAQVEQIRCQYSRDDPVVCV--QWNSIIAVSYAAKKFGISRMDTVFDAFKK 83 Query: 62 F----RRCGVVC----------------------------FSSNYELYADMSNRVMSTLE 89 V + + Y S +++ Sbjct: 84 CEGLMPVHTAVFKKGEDFWQYHDDCGSWHTDESKKLSPELHKVSLDPYRRESRKILKIFS 143 Query: 90 ELSPRVEIYSIDEAFCDLTG---VRNCRDLTDFGREIRATVLQRTHL---TVGVGIAQTK 143 E VE S+DE F DL D + G E T + G+ + Sbjct: 144 EWCDLVEKASVDEVFLDLGRNVFSLLLIDESQKGFESIRTQFREGSYDLDDYLPGVPKDV 203 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT- 202 + A + + + + + + + +I + L G T Sbjct: 204 EINIEAGDYNPQKRTLY------DDWDDVLFCLGSTITKKIR---DQIEEVL---GYTTS 251 Query: 203 VLDLADTDIRFIRKHFNV-VLERTVRELRGEP-----CLQLEEFAPTKQEIICSRSFGER 256 + + +F + VR E L+L F + Sbjct: 252 CGIARTKTVAKLASNFKKPNAQTIVRNCNIEDFLDNESLELTSFWSMGGIFGKEVTQLLD 311 Query: 257 I---TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 + +R + + +R + + + + A + Sbjct: 312 LPSERSLKYIRDSWPVSSWELGAHMREKIRKLNSGKEKLYSLDDAQVQQM---------- 361 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 + I A + K+ + + Sbjct: 362 -----ADKIFQLARGDFKMPFNP-RPVIKSMMSNKNL 392 Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 89/297 (29%), Gaps = 50/297 (16%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + ++IR + + T GIA+TKT+AKLA++ K + + Sbjct: 231 GSTITKKIRDQIEEVLGYTTSCGIARTKTVAKLASNFKKPNAQ------TIVRNCNIEDF 284 Query: 176 MSA--LPVDDVWGIGRRISKKLDAM-------GIKTVLDLADTDIRFIRKHFNV------ 220 + L + W +G K++ + +K + D + H Sbjct: 285 LDNESLELTSFWSMGGIFGKEVTQLLDLPSERSLKYIRDSWPVSSWELGAHMREKIRKLN 344 Query: 221 ----------------VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 + ++ + RG+ + K + G Y Sbjct: 345 SGKEKLYSLDDAQVQQMADKIFQLARGDFKMPFNPRPVIKSMMSNKNLPGNSCKHYVDCL 404 Query: 265 QAICSYAARAAEKLRSEHQ------YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 + ++ +++ Q + I+ KT + + + +V ++D Sbjct: 405 AWLEVFSGDLIGRIKELEQEYERIIVPKTITVMTKTRNYERHTR--RTTLTVGGQVKSKD 462 Query: 319 SRDIINAATRSLDAIW---QAGHRYQKAGVMLGDFFSQGVAQL--NLFDDNAPRPGS 370 + R L++++ + + L +F + ++F Sbjct: 463 LMEFGTKLIRELESLYGGSDTYYPLTGIAMSLSNFEIHETGRTIVDMFGRQTQVVRK 519 >UniRef50_C1E7T2 Umuc-like DNA repair protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7T2_9CHLO Length = 652 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 4/109 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A DV+AFY+ E + P L G+P+ V ++ N A++ G+K K K Sbjct: 59 IVAHFDVDAFYSQVEELRDPRLRGRPMAV--TQKFLIVTANYAARSAGLKKLMSTTKAKA 116 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG 109 L +V + Y + +V + LE E +DE + DLT Sbjct: 117 LCPEVALVSGE-DLTPYRACAKKVRAALERFG-TCEKLGLDECWVDLTA 163 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 89/291 (30%), Gaps = 40/291 (13%) Query: 93 PRVEIYSIDEAFCDLTGV---RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLA 149 PR E + +A D++ R R E R V T L + GIA K LAKL Sbjct: 222 PRCEDGADPDANPDVSDPARERRLRVGAAIAAEARDAVRSATGLRMSAGIAHNKMLAKLV 281 Query: 150 NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT 209 + K + T KL+S LPV + G+G + L G++T DL Sbjct: 282 SGLHKPDDQTT------LPAGVAAKLVSPLPVRALPGVGHGAERTLVHRGVRTAADLRRV 335 Query: 210 DIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAIC 268 + + + G ++ + T + S+ + Sbjct: 336 TRSEVCEWLGPRVGRKVHDAAWGVDREEVAPKPAPN--FVTCEDSFRSCTTWSSVDAVLA 393 Query: 269 SYAARAAEKLRSE-----------------HQYCRFISTFIKTSPFALNEPYYGNSASVK 311 A ++ E + R ++ + + S S Sbjct: 394 VIAPDLLARMDEEYEDEVERTVGAGALIPAGRAARTLTVKWRDVGPGGKGTGWSRS-SAS 452 Query: 312 LLTPT----------QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 PT + + + AATR L + G + V G+F Sbjct: 453 TTMPTLANDRSIDAKRRADALREAATRVLRSELTRGFDLRALNVGAGNFEP 503 >UniRef50_Q5KGG8 Eta DNA polymerase, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KGG8_CRYNE Length = 690 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 50/133 (37%), Gaps = 25/133 (18%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A CD++A YA E V P++ +IA N A+ G+K K + Sbjct: 37 IAHCDIDAAYAQFEQVRLGLPDDIPLICA--QWQSIIAVNYPARKYGIKRFTSIEDAKKM 94 Query: 62 FRRCGVVCF---------------------SSNYELYADMSNRVMSTLEELSPR--VEIY 98 + + ++Y S ++++ +E PR +E Sbjct: 95 CPHLRIQHVATYRNGESEAGYWDDVDPRTHKVSLDVYRRESLKILAIFKEKIPRGEIEKA 154 Query: 99 SIDEAFCDLTGVR 111 SIDEAF DLT + Sbjct: 155 SIDEAFLDLTPMV 167 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 25/223 (11%), Positives = 62/223 (27%), Gaps = 24/223 (10%) Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKT 202 ++ L + K + + ++ D+ +G ++ + G KT Sbjct: 260 LMSNLCSAWKKPNNQ------TILRTAAVPAFLNGRDFTDIRSLGGKLGAAIAQQFGAKT 313 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 V D+ + +++ F LRG ++ + + ++ S+S +T Sbjct: 314 VGDMLTVSLDEMQRKFGEESIWVYNILRGIDHSEVTDRV-ATKSMLASKSIRPAVTSPQQ 372 Query: 263 MRQAICSYAARAAEKLRSE-----HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 Q + A +LR + + + + S + Sbjct: 373 GHQWLSILAGELNVRLRQSREIMPGLWPKTLVLSYR------QGIEPTRSRQIPFPFTRN 426 Query: 318 -DSRDIINAATRSLDAIWQA----GHRYQKAGVMLGDFFSQGV 355 + I+ A + D Q + + Sbjct: 427 LSTDYIMKYAKKLWDEATQPMLKGNMKLNVIALSFTGLEKLEE 469 >UniRef50_A3LN71 DNA polymerase eta subunit n=1 Tax=Pichia stipitis RepID=A3LN71_PICST Length = 733 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 24/133 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + +L D+NAF+A E + PVV + +IA + A+ G+ D K Sbjct: 45 VISLIDLNAFFAQVEQLRLGLPVETPVVCV--QWSTLIAVSYAARKFGIGRLDTLQSAKQ 102 Query: 61 LFRR----CGVVC------------------FSSNYELYADMSNRVMSTLEELSPRVEIY 98 V + + Y S +++ ++ VE Sbjct: 103 KCPNLVCAHAAVFKKGESHWAYTKGLPNQATHKVSLDPYRRESRKIVKIFQQHCDLVEKA 162 Query: 99 SIDEAFCDLTGVR 111 S+DE++ DL + Sbjct: 163 SVDESYLDLGRLV 175 Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 33/256 (12%), Positives = 73/256 (28%), Gaps = 36/256 (14%) Query: 106 DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 D V +IR + T GIA K +AKLA K + Sbjct: 243 DWDDVCMLIGSM-IVLDIRKALYDEMGYTTSAGIASNKQVAKLAGGFKKPDNQC------ 295 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKK-LDAM------GIKTVLDLADTDIRFIRKHF 218 + ++ ++DV +G + L + GI + + + + I + F Sbjct: 296 VIRNRSTYSFLNNFELNDVTSMGGKTGDFVLQKLRVPPDKGISYIRE--NFTLEAIEEEF 353 Query: 219 N---VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF--GERITDYPSMRQAICSYAAR 273 N + ++ +RG +L + ++ ++F + I +A Sbjct: 354 NDDIPLAKKIYEIVRGNHRRELVNRMDV-KSMMSRKNFLAKHPVETLSDADSWIKVFAGD 412 Query: 274 AAEKLRSEHQYCRFISTFIKTSPFALNEPYY-------------GNSASVKLLTPTQDSR 320 ++ + +S ++ S +L+ Sbjct: 413 LYNRMIELDEENLRLSMSQVSNKEKGVIKRPKTLSINLGTSSGIRRSKQAQLMQY-SSLD 471 Query: 321 DIINAATRSLDAIWQA 336 + + I + Sbjct: 472 RLWEHFEQIGYRILRD 487 >UniRef50_UPI0001BC2B48 hypothetical protein BlinB_00220 n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2B48 Length = 568 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 73/435 (16%), Positives = 127/435 (29%), Gaps = 70/435 (16%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 A+ E F P PV VLS A A G+ +G+ VV Sbjct: 35 AATEHEFSPR---TPVAVLSGGKVVAANAPAR--AAGIALGNNKRAVGYRCPEAQVVA-- 87 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFGREIRATVLQR 130 N E + + LEEL R + S L +++ D + + ++ Sbjct: 88 WNEETDNRHFSAGVGALEELVARFTLLSPGTLAIPLDSLKHGYADEPSAVEALISALVAA 147 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR- 189 T GIA T A LA A++ + ++A P+ + G Sbjct: 148 TGWEFFPGIADTVFAAVLAAGQARR-----------VEPGETAEFLAAQPISTLEYAGAG 196 Query: 190 --RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 + +G++T+ DLA D+R + F + + G L + ++ + Sbjct: 197 ATELIDTFTQLGLRTLGDLAGIDVRAVNSRFGTLGKHAHDLATGVEWAPLNDHVREEK-L 255 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST------------FIKTS 295 E T ++ AA +R C I+ + Sbjct: 256 TVELGLDEPTTRSDTLGFLTRQLAADLLTTVRRRGLVCTQITIELIAVSGQSSKRTWRIE 315 Query: 296 PFALNEPYYGNSAS----------------VKLLTPTQDSRDIINAATRSLDAIWQAG-- 337 N + TP++ S + S D A Sbjct: 316 DMNENTIADRLRWQAEGWLAGSTRKGPASPQQGSTPSRTSSKNRKDSRHSKDRETPAPDE 375 Query: 338 ----------HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRG 387 G++ + + A +LFD+N Q+ ++ L G Sbjct: 376 PGPDPEDFSEEGIIALGLVAAELTTPIGATRSLFDENTG-----QVTHTLERLQGLFGPD 430 Query: 388 TLYFAGQGIQQQWQM 402 + G+Q W Sbjct: 431 AVL--VPGLQGGWDP 443 >UniRef50_Q6CDC9 YALI0C01573p n=1 Tax=Yarrowia lipolytica RepID=Q6CDC9_YARLI Length = 640 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 23/129 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+A E V G PV +IA A+A G+ + + L Sbjct: 26 IVHLDMDAFFAQVEQVRLGLPPGTPVAC--RQWDGLIAVGYAARASGITRHMRAPEAQKL 83 Query: 62 FRRCGVVC---------------------FSSNYELYADMSNRVMSTLEELSPRVEIYSI 100 + + + + Y +V++ +++ S VE S+ Sbjct: 84 CPNLVMAHAASFKRGEDMWEYHANPSADDYKISLDPYRQAGKKVLNIVKQYSSVVEKASV 143 Query: 101 DEAFCDLTG 109 DE++ DL Sbjct: 144 DESYLDLGP 152 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 39/306 (12%), Positives = 95/306 (31%), Gaps = 33/306 (10%) Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + P + D D + + +R V + T GIA+ +++AK Sbjct: 204 VSRFDPDI-RVHDDTMVTDWDDLVLMFGA-RISKRMREQVYEELKYTCSAGIARCRSVAK 261 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI-SKKLDAMGI-----K 201 LA+ K + + + + D+ G+G ++ + L+ +G+ Sbjct: 262 LASAQNKPNNQ------TVVRAGALNNYLKKKSLTDIGGMGGKLGEEVLEKLGLDKESKD 315 Query: 202 TVLDLADTDIRFIRKHFNVV--LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE-RIT 258 + + + +++ E+ RG L+ + ++ +++F + Sbjct: 316 NITQVQALSKQQLQQKLQNASLTEKVFNLARGNLYRGLKTRI-ELKSMLSAKNFARVPLK 374 Query: 259 DYPSMRQAICSYAARAAEKLRSE----HQYCRFISTFIKTSPFALNEPYYGNSASVKLL- 313 D + +A A ++ R + ++ + F +P S L Sbjct: 375 DRKEAELWLVVFAGELAMRIVEHEKELGTCRRPRTVSLQHARF---KPMVKRSRQQDLPL 431 Query: 314 TPTQ-DSRDIINAATRSLDAIWQAG----HRYQKAGVMLGDFF--SQGVAQLNLFDDNAP 366 T ++ A + L I + + + F G + + F Sbjct: 432 VHTNKLKEELFAAGVKLLKLIENEPEHDAYPISMLSLSVTGFVELPAGASIGHFFKTITT 491 Query: 367 RPGSEQ 372 + Sbjct: 492 EAREKA 497 >UniRef50_C4Y9R5 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y9R5_CLAL4 Length = 748 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 41/129 (31%), Gaps = 24/129 (18%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 L D+NAF+A CE + PVV +IA + A+ G+ D ++ Sbjct: 44 IGLIDLNAFFAQCEQIRLGKTIDDPVVCC--QWQSLIAVSYAARKYGIGRMDSLQSAREK 101 Query: 62 FR----RCGVVCFSSNYEL------------------YADMSNRVMSTLEELSPRVEIYS 99 V Y S +++ L+ VE S Sbjct: 102 CPGLIVGHAAVFRKGEAHWQYLDKLPDQSLHKVSLDPYRRESRKIIKVLKRECDLVEKAS 161 Query: 100 IDEAFCDLT 108 +DE + D Sbjct: 162 VDECYLDFG 170 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 32/231 (13%), Positives = 64/231 (27%), Gaps = 17/231 (7%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + + R + T G+ +KT+AKLA K + + Sbjct: 266 ASQLLYKARCAIYSELKYTTSGGVGNSKTVAKLAGGFIKPD------FQTVVPPRSAKAF 319 Query: 176 MSALPVDDVWGIGRRISK-KLDAM-------GIKTVLDLADTDIRFIRKHFNVVLER-TV 226 S + D +G + + L + I+ + + D + L R Sbjct: 320 FSHFHLSDFTMMGGKTGELVLQKLSVPPDCNSIEYIRENWPLDRIEAQFPSEPQLARKVY 379 Query: 227 RELRGEPCLQLEEFAPTKQEIICSR-SFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 +RG +L+ K + + + I + +L Sbjct: 380 ELVRGIHHQELKLRTDVKSMMSRKNFTAKNPVNTLSDAFDWIKVFVGDLYGRLVELDDEN 439 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA 336 +S + + P S V + ++ S+ R LD Sbjct: 440 MNLSASQSQAQGYIYRPR-TASIQVTTTSYSRYSKQTSIVVLRDLDKFRHN 489 >UniRef50_B9BQL7 UmuC protein n=2 Tax=Burkholderia multivorans RepID=B9BQL7_9BURK Length = 133 Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 2/108 (1%) Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 PT D+ ++ AA L I++ G +Y KA ML + +QGV Q +LF A ++LM Sbjct: 28 PTSDTLRLVAAALYGLKRIYKPGFKYAKARFMLTELQAQGVEQGDLFAPEA--SKRDRLM 85 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 +D +N + GR TL Q W M + +P YTT DL + Sbjct: 86 AELDAVNDRFGRNTLRVGNVEGHQAWHMAQNAKTPSYTTDWGDLPVAR 133 >UniRef50_Q08N74 Nucleotidyltransferase/DNA polymerase involved in DNA repair, putative n=2 Tax=Cystobacterineae RepID=Q08N74_STIAU Length = 503 Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 54/386 (13%), Positives = 110/386 (28%), Gaps = 26/386 (6%) Query: 10 FYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 F A + + P L GKP ++ V + A G + G L + Sbjct: 11 FPAQRKVIESPGLAGKPFALVEEVRGQRRVAFASTSALKAGARAGMTLTAANALEP--AL 68 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATV 127 F+ E A + + L ++P ++ + D + D + + + V Sbjct: 69 QHFAYRAEEEARALSSLGEALLCVAPAFQLAAPDGLWFDASAA-HLFGGEEGLCLRALEV 127 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI 187 +A ++ T V ++ E L S + Sbjct: 128 CSGHGYRGRAVVASELFTSQALAR------HGTRPVQVVAPQESAPALASLPLLALA--- 178 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 A+G T+ ++A + R +G + + Sbjct: 179 -EASRAPFTALGFSTLGEVAALPAGAVTARGGAEGLRAHMLCQGRDDTPFVAAVLEEV-L 236 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 + + ++ A+ + R +L + +S ++ P Sbjct: 237 EERMTLEWPAESFEPLQFALKTVLDRICARLAGRRRAAVQLSFVLRLD------PKGQVE 290 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 + L PT S+ +++ A L + + + + QL L D Sbjct: 291 LPLTLARPTARSKLLLDLARHRLSDLKLEN-PVAALSIRVEEHSEDRGQQLALGDAPEGD 349 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAG 393 L V+ L G G+L+ A Sbjct: 350 ---AALEVVLSRLATTLGEGSLFCAA 372 >UniRef50_Q3SEZ7 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SEZ7_THIDA Length = 467 Score = 96.0 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 51/398 (12%), Positives = 104/398 (26%), Gaps = 33/398 (8%) Query: 13 SCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 S E R P+ V+ N VIARN A GV+ G + L +V Sbjct: 12 SLEVFTRGSASALPLAVVEKQGNRTWVIARNDPAAERGVRPGMAASAAQALADE--LVVR 69 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 + + + +P V + + D ++ D R + Sbjct: 70 QRDPGDEQAALTGLAAWAGRFTPSVSLQAPDGLLLEVGTCLTLHRGLDNLRARVREGVDA 129 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 + A T A L G + ++ LPV + + Sbjct: 130 MAYSATSACAPTALGAWLLA---------QAGEETAVDANALEARLARLPVGLL-DLSPD 179 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 + LD +G T+ D + + + L + G FAP + Sbjct: 180 TRESLDLVGAHTLGDCLKLPRAGLARRYGQGLLDQLDRALGRLPEPRAFFAPPPR-FERR 238 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 + ++ L + + + +E + Sbjct: 239 LELPAPVEHAEALLFVARRLLPELEGYLALRQAGVQALEYVCR------HEGRPDTVLKL 292 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF------DDN 364 + P + + ++ +L+ + + +LF D Sbjct: 293 GFVKPVRAASRMLLLLRETLERTVLP-APVYAVRLRARRLQPLHGSSPDLFQRGEEAGDG 351 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 ++ D + G + A ++ W+ Sbjct: 352 DLLLERLRVRLGRDAV---YGVEAV--ADHRPERAWRR 384 >UniRef50_C4QYV7 Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4QYV7_PICPG Length = 614 Score = 95.2 bits (235), Expect = 5e-18, Method: Composition-based stats. Identities = 30/141 (21%), Positives = 48/141 (34%), Gaps = 24/141 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A DVNAF+A E + P+V + +IA + A+ G+ D Sbjct: 32 VVAHIDVNAFFAQVEQLRLGLSKEDPLVCV--QWSSIIAVSYSARKYGINRMDTLESALS 89 Query: 61 LFRRCGVVC----------------------FSSNYELYADMSNRVMSTLEELSPRVEIY 98 V + + Y S ++M + +VE Sbjct: 90 KCEGLKVGHTAVFKKGQSDWSYIDYLPSPKDHKVSLDPYRRESRKIMRIFKLRCSKVEKA 149 Query: 99 SIDEAFCDLTGVRNCRDLTDF 119 S+DE+F DL V + L F Sbjct: 150 SVDESFLDLGNVVFQKLLELF 170 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 40/289 (13%), Positives = 89/289 (30%), Gaps = 31/289 (10%) Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS-A 178 +IR + + T GI + KT+AKLA+ K + + ++ Sbjct: 231 AHDIRKQIEKALDYTTSCGIGRVKTIAKLASGLHKPDNQ------TIIRNCAIDNFLNTH 284 Query: 179 LPVDDVWGIGRRISKKL-------DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 D WGIG + S + + I + + + ++ + R + +RG Sbjct: 285 FKFTDFWGIGPKTSGIIKQRLLVPEEDSIGYIKENFTQEELELKLKDPQLATRLYQLVRG 344 Query: 232 EPCLQLEEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + + +++F G+ + + + + ++L + Sbjct: 345 LYQEAINTRIDI-KSMGSNKNFRGKSVNSVKDLIDWLPVFVGDLIQRLTELDEEQPNCIR 403 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQ----------DSRDIINAATRSLDAIWQAGHRY 340 KT L S + ++ +I + D + Sbjct: 404 RPKTVAVHLWSWNGAYSKQCTVPKFMDLFKLKEVISHEAEHLIKTFASTFDNSPVSLFPL 463 Query: 341 QKAGVMLGDFFSQ-GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 + + L F ++ F ++ R E +D+L G T Sbjct: 464 RSFSLNLTSFEVISSKESIDKFVSSSKRNREEH----IDSLFKSLGENT 508 >UniRef50_A9FIX7 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FIX7_SORC5 Length = 621 Score = 94.8 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 63/426 (14%), Positives = 120/426 (28%), Gaps = 60/426 (14%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV 95 + + EA+ GV+ G + L + + RV L Sbjct: 61 VIDVVDDEARRYGVRPGQKVVEAAALV--AHLAIHRVTFAEIDAALGRVAEVALGLGATA 118 Query: 96 EI--------------------------------YSIDEAFCDLTGVRNCRDLTDFGREI 123 I D + D+TG + + Sbjct: 119 AIQLGEQGAPRAGAARASRAPERAASEARSPWGDGPYDTVWLDITGASHLVGGEEALLGE 178 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 + + IA LA+ G ++ + + + LPV Sbjct: 179 LGERVAALGHRARLAIADGPRLAQALARFGAHADGGGGAEAPIAPPGKGAQAIGPLPVQA 238 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 + + R ++ L +G+ V DLA + + L G + L F Sbjct: 239 LP-VEREVASFLVRLGVLRVEDLARLPRAQVAARLGPRTADVMELLAGRDPVPLLPFEVP 297 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP------- 296 + + F E I S+ + +R A +L + + C ++ I Sbjct: 298 -RLLEEEVLFDEPIESAESLLFVLRGMTSRIASRLAARGEACGRLNVAIAYDRSIARLRL 356 Query: 297 -----------FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 + V + P D+ D++ L+ I A V Sbjct: 357 GEREDDGAAALLEDDGRGPSLRFHVDMPVPLSDAGDLLRPLKARLERIELAAPAV-GVHV 415 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK-R 404 + QL+L D + P + L ++ L+A+ G+ + I + + R Sbjct: 416 IASRIARARRVQLDLSRDRSVDP--DSLPALLAELSAEIGQERV--GILEIADAHRPEAR 471 Query: 405 AMLSPR 410 + L P Sbjct: 472 SRLVPA 477 >UniRef50_Q86ZI6 Related to DNA Polymerase iota (POLI) n=3 Tax=Sordariaceae RepID=Q86ZI6_NEUCR Length = 753 Score = 94.0 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 5/110 (4%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D++ FYA P L P+ + + N A+ LGVK + Sbjct: 49 DLDCFYAQVYENKTPSLKSLPLGI--RQKSLLATCNYPARRLGVKKLMSIASALAICPDL 106 Query: 66 GVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNC 113 +V + + D+S R+ + L S RVE +DE + D++ + Sbjct: 107 VIVDGE-DLTPFRDVSKRLYALLRSYSWNDRVERLGLDEVWMDVSDIIEY 155 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 76/262 (29%), Gaps = 49/262 (18%) Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN-LERQRKLMSALPVDDVWGI 187 + T GI+ K LAKL + K + T + + E ++ M + + + GI Sbjct: 235 EEEGYTTACGISTNKLLAKLVGNVNKPRNQTTLLSLGPDDGEETVQRFMGSHQLRKIPGI 294 Query: 188 GRRISKKLDAMGIK---------------TVLDLADTDIRFIRKHFNV------------ 220 G + + L I TV DL K ++ Sbjct: 295 GGKTAAALSDYFISQSKPGSSSPPNPKEITVDDLLSCPGLSPSKLDSLLSSLSSSSSTGT 354 Query: 221 -VLERTVRELRGEPCLQLEEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKL 278 + + L+G ++ +I ++ + +R+ + +++ Sbjct: 355 GTGKHILSLLQGHDPSPVKPARSIPTQISIEDTYFSCPLVTIEQIRRELVKITGSLLKRM 414 Query: 279 R-------SEHQYCRFISTFI----KTSPFALNEPYY-GNSASVKLLTPT-------QDS 319 + + R + + +T P Y S S L D Sbjct: 415 KTDLMDDDKKRWLARPKTLRLTTRPRTDPKEGRGYGYGRVSKSQGLPGYVFNNGNAHGDD 474 Query: 320 RDIINAATRSLDAIWQAGHRYQ 341 + +L +++ + Sbjct: 475 EIVQRLVAETLLPMFRELNPLN 496 >UniRef50_Q7UJH7 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UJH7_RHOBA Length = 552 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 57/400 (14%), Positives = 116/400 (29%), Gaps = 57/400 (14%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDL-------------------FRRCGVVCFSSNYELY 77 + A A A+GV++G P + D+ + + Sbjct: 1 MAASCQRAAAMGVRLGMPIAQAVDITTTLADQHNSGRNVANQSVPPIPTAIIDEHDRVAD 60 Query: 78 ADMSNRVMSTLEEL-SPRVE-------------IYSIDEAFCDLTGVRNCRDLTDFGREI 123 + + + L+ P++ + + ++ GV + D Sbjct: 61 RRALHSLATELQSHLCPQIALETLDRFKWAGRFRHDPEALVAEIDGVTHLFDDEPGLLAA 120 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKK------WQRQTGGVVDLSNLERQRKLMS 177 AT+L+R HL + IA T A A + L+ R R + Sbjct: 121 AATILKRRHLNARLAIASTLGAA-WALATHAPSQTRTKDPAKNHFDFFLAPANRTRDALQ 179 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LP + + + L +GI+T+ L + L + + GE + Sbjct: 180 TLPPSALR-LNPTDVETLQRLGIETIGSLLQLPRSGLATRIGHGLCNRIAQALGEVDEPI 238 Query: 238 EEFA-PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 PT+ + D +R I A LR + + I Sbjct: 239 LAIDIPTEHTASLELEYPTDAVDL--IRDRIIRLIESATASLRPLGRGVLRLRCQI---D 293 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + + L +PT D + N + ++ + + Sbjct: 294 FTESP---SVTLESGLFSPTLDLNHLSNLMIGAFESHACQSK-VSHLRLDVLQDAILAST 349 Query: 357 QLNLFDD------NAPRPGSEQLMTVMDTLNAKEGRGTLY 390 Q ++F + ++D+L+ + G ++ Sbjct: 350 QPSIFGPGFESDTQTDWTRQTDIARLIDSLSGRLGEESVR 389 >UniRef50_Q5P4A3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4A3_AZOSE Length = 475 Score = 93.3 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 48/365 (13%), Positives = 104/365 (28%), Gaps = 29/365 (7%) Query: 45 KALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAF 104 + GV++ + +V + L A + + + V + D Sbjct: 45 RVRGVELRQGVAGALAVVPE--LVLRERDPALEAATLAELATWAGRFTSCVSLDPPDAVL 102 Query: 105 CDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV 164 + + D + A LT + A T A+ Sbjct: 103 LEASASLRLFGGIDGLAQRIADAALPLGLTTTLAAAPTPLAARWLARVR---------PG 153 Query: 165 DLSNLER-QRKLMSALPVDDVWG---IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV 220 L + ALP++ + + + L +G++ + +LA + + Sbjct: 154 TLVRPSNGWAGALDALPIELLADGAPVPPATLELLRGVGVRRIGELARLPRDGLARRDAS 213 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 V+ TV RG F P ++ + +R A + A L + Sbjct: 214 VVTDTVARARGREPDPRPRFVPAER-FASRLVLPASVAHTEPLRFAAGRLFSNLAAWLAA 272 Query: 281 EHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRY 340 ++ + P +D+ + A+ L A+ Sbjct: 273 RQAGLDCCRL------HLEHDCAPATVVEIVTGRPQRDAARFVQLASEHLAALVLP-APV 325 Query: 341 QKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF----AGQGI 396 + + + +LF E + ++D L+A+ GR + A Sbjct: 326 EALRLTADTPVALPAGTPDLFG--GKDDAREAALRLLDRLHARLGRDAVRTVLPVADHRP 383 Query: 397 QQQWQ 401 ++ W+ Sbjct: 384 ERAWR 388 >UniRef50_Q4PF20 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PF20_USTMA Length = 763 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 5/116 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFY S P L G P+ + V + EA+A GV D Sbjct: 60 VIIALDLDAFYVSACRKRDPSLVGIPIGI--QQKALVATISYEARAAGVGKLDSIKDALK 117 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEE--LSPRVEIYSIDEAFCDLTGVRNCR 114 +V + + +S++V + RVE +DE FCD+T + + Sbjct: 118 KCPDMILVNGE-DLTYFRQVSSQVWRLVRSIVWEKRVEKLGMDELFCDVTEMVDHH 172 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 27/195 (13%), Positives = 50/195 (25%), Gaps = 54/195 (27%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG------------- 162 +R + LT GIA +K+LAKL K Q+ Sbjct: 239 AARLAYYMRQRISDEVGLTCSAGIAPSKSLAKLVGALNKPNQQTAFCPPVVGLVSDRCKR 298 Query: 163 --VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM--------------GIKTVLDL 206 ++L+ M L + + G GR + K+ +TV L Sbjct: 299 ANSIELTLERHVTAFMDPLDLRKLPGFGRVVVDKIRDHLNHDSNASAEQSNRNRQTVSSL 358 Query: 207 ------------------------ADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFA 241 + + + F V+ R + G + Sbjct: 359 VEPIGLSDDEEEKVKVKVFVGAARKMLSLEAMVELFGEVIGPRLWALVNGRDAEPVIPAP 418 Query: 242 PTKQEIICSRSFGER 256 ++ ++ Sbjct: 419 DFPLQLSIEDTYPYP 433 >UniRef50_Q4PIG2 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PIG2_USTMA Length = 865 Score = 92.5 bits (228), Expect = 3e-17, Method: Composition-based stats. Identities = 37/222 (16%), Positives = 70/222 (31%), Gaps = 8/222 (3%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + +R VL T GI KTL+KL + K + + Sbjct: 409 GAELMNRVRQNVLDELGYTTSAGIGSNKTLSKLCSSWRKPNGQ------TIMRPCSVANF 462 Query: 176 MSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 S+LP + +G ++ + TV DL + ++ F LRG Sbjct: 463 FSSLPFQKIRFLGGKLGNAMGAEWNSATVSDLWGVGLDEMQAKFGEEARWVYNVLRGIDY 522 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 ++ E Q ++ S+S IT + + A +LR + R + Sbjct: 523 SEVRERVN-NQTMLASKSVRPAITKPEEATHWLDILSTELAIRLREAREERRNLWPKTLV 581 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA 336 + + + T + D+ + +W+ Sbjct: 582 LRYIRAGSVPRSRQTAFPFTNPNNQDDLAKVILKKGQKLWEE 623 Score = 84.8 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 47/132 (35%), Gaps = 26/132 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGK-PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + A CDV+A YA E P+ V +IA N A+ GV + + Sbjct: 115 VVAHCDVDAAYAQFEASRLGLDATVVPIAV--QQWQGLIAVNYPARDAGVSRFESIPEAL 172 Query: 60 DLFRRCGVVCF--------SSNY-------------ELYADMSNRVMSTLEELSPR--VE 96 +V +Y + Y S ++++ + P VE Sbjct: 173 KKCPDLHLVHVATYAHGSNKPDYHPDPKPETHKVSLDHYRRESTKILTIFKRTCPHGAVE 232 Query: 97 IYSIDEAFCDLT 108 SIDE++ DLT Sbjct: 233 KASIDESYFDLT 244 >UniRef50_C7X3F8 UvrA n=3 Tax=Enterococcus faecalis RepID=C7X3F8_ENTFA Length = 158 Score = 92.1 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 50/142 (35%) Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 + + + A +LR +S F+ S ++ + P+ +++ + Sbjct: 2 VLKELSDQVASRLRMASCQTTCVSLFVGYSKGQTDKYGQTGWRRQMKVEPSNNTKVLTEH 61 Query: 326 ATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEG 385 R + + G + GV G QL+LF + + ++D + K G Sbjct: 62 VLRLFEENYAPGVDVRNLGVSYGRLVWNKNLQLDLFSVPEEQIHETDMYFLIDKIRQKFG 121 Query: 386 RGTLYFAGQGIQQQWQMKRAML 407 L A ++ + RA L Sbjct: 122 FKALIHASSLMEGATAISRASL 143 >UniRef50_A6GCV2 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCV2_9DELT Length = 537 Score = 92.1 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 61/390 (15%), Positives = 118/390 (30%), Gaps = 21/390 (5%) Query: 18 FRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 P PV ++ ++ ++ N A+A V G + + L R F++ E Sbjct: 47 EHPAWRELPVAIVESDRPQAKLLWVNEHARARRVLPGMRYAAARSLARDLRATVFTA--E 104 Query: 76 LYADMSNRVMSTLEELSPRVEI--YSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 + + + L + SPR+E + + D G+ + L + L Sbjct: 105 RMEAAVDALFAILFDFSPRIEPEADAPGTVWIDPAGMTLLWGELESWALAVEEALAQRGL 164 Query: 134 TVGVGIAQTKTLA----KLANHAAKKWQRQTGGVVDLSNLERQRKL-MSALPVDDVWGIG 188 V + + A + H A R G +R+ + M+A D GI Sbjct: 165 GAVVVVGFHRFRALAIARAHAHRANPDTRDREGPQAWVLRDRRAEARMAASVPLDRLGIS 224 Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEII 248 R+ +L ++G++++ + +R V E LE ++ Sbjct: 225 PRLRDELASLGVRSLGEFMALPAVELRGRLGVEAEALQARASEGAWAPLEPRRLIDP-LV 283 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 D + I + +L + F L+ Sbjct: 284 QRTELDPPEGDVTRLLFRIEPALSELLSRLADRGAALSALQL-----RFELDHDEPLALR 338 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 PT D+R ++ LDA+ + + L Q+ LF R Sbjct: 339 LEP-AAPTLDARLLLELVRLRLDALDLP-APVELFVLELEG-QRADPRQIALF-RAQTRR 394 Query: 369 GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + + + A G ++ A Sbjct: 395 DLDAANRALARIRAALGPESVTRAALLPAH 424 >UniRef50_B5I0P9 Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I0P9_9ACTO Length = 291 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 9/154 (5%) Query: 91 LSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 +P VE D A DL G D + IR L + +G LA++ Sbjct: 139 FTPVVEALPPDRALADLRGAERYFKRDAVELASVIRVRALALHGVDCAIGAGPGPMLARM 198 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLAD 208 A A+ GV + ++ PV + G+G ++ L G+ T+ +A Sbjct: 199 ALKDARP------GVTRSVPGDAAADFLAGRPVAALPGVGAATARTLCEYGLDTLGRVAA 252 Query: 209 TDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFA 241 + +++ + G ++ + Sbjct: 253 APLSTLQRLVGAKAGRELHEKANGVDRGRVVLYF 286 >UniRef50_A5DV91 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DV91_LODEL Length = 731 Score = 91.7 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 24/130 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D+NAFYA E V PVV +IA + A+ G+ D K Sbjct: 46 VIALVDLNAFYAQVECVRLGLSDEDPVVC--QQWQSIIAVSYAARKYGISRLDTVHSAKL 103 Query: 61 LFRRCGVVCF------------------SSNY----ELYADMSNRVMSTLEELSPRVEIY 98 ++ + Y S +++ ++ V+ Sbjct: 104 KCPHLICAHAGVYKKGDSHWAYYPGSPSPVDHKVSLDTYRRESRKILRIVQSKFDLVDKA 163 Query: 99 SIDEAFCDLT 108 S+DE++ DL Sbjct: 164 SVDESYVDLG 173 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 79/289 (27%), Gaps = 49/289 (16%) Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 R T+ + T G+A+ + +AKL+ K + + + + + D Sbjct: 261 RRTIYEELGYTTSAGLARNRLVAKLSGDFKKPDNQ------TIVRNCALNRFLQNFELTD 314 Query: 184 VWGIGRRISKKL--------DAMGIKTVLDLADTD--IRFIRKHFNVVLERTVRELRGEP 233 + G G ++ K L + I + D +R + + +RG Sbjct: 315 ITGFGAQLGKSLIVKFQCPSNTNSIAFIRDNYTQSMMREELRDD-PELANKLYLIVRGLY 373 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL--------------- 278 L+L K + + + YA + +L Sbjct: 374 PLELTSKVDVKSMMSTKNFRDNSPWCLKDAYEWLTVYAGDLSNRLLDLDNESMDLSLTKI 433 Query: 279 --RSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS---RDIINAATRSLDAI 333 R R + I + + + + + S + I+ + L Sbjct: 434 SKRDRGVLKRPRTITI----GVRSTAFVRQTRQMPIPIHKDISKMKQTILECGCQLLREY 489 Query: 334 WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 + + + G LF + ++ + ++ Sbjct: 490 MEHNTDLTRL--------NNGKTPKELFAGDPKNVKIMKMQNMSLAISN 530 >UniRef50_Q5BYF2 SJCHGC07422 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q5BYF2_SCHJA Length = 179 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E +P+L PV V SN+ + N A+ GV+ G P F K L Sbjct: 113 IVHVDMDAFYAAVEIRDQPELRHHPVAVGSNS--MLSTSNYIARRFGVRAGLPGFLGKKL 170 Query: 62 FRRCGVV 68 + ++ Sbjct: 171 CPQLKII 177 >UniRef50_B5JLQ0 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLQ0_9BACT Length = 523 Score = 91.7 bits (226), Expect = 5e-17, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 117/384 (30%), Gaps = 26/384 (6%) Query: 26 PVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 VVV+ V+ A GV +G + V S E + Sbjct: 47 AVVVVDAEAKKPVVLEMTEMAAKEGVVVGLSIPQALARCEGLVVKHRSDQAERMVEEL-- 104 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + + LSPRVE+ DL G + + G + L LTVG+G+A++ Sbjct: 105 LFAMAYSLSPRVEMDGAGRVLVDLRGAKIEEAIARCGEIVGE--LAAMGLTVGIGVAESW 162 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLE--------RQRKLMSALPVDDVWGIGRRISKKL 195 +A LA A + G L + ++ L + V G + L Sbjct: 163 VVAGLAARAVEGRVLCVGPCFALRASQGSRGARSVEVGAFLAGLALGAVEMSG-ALRDVL 221 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 + GI+++ A + V + G + E + S F Sbjct: 222 EKWGIRSLAVFAGLKRSAVGARLGVEGLALWDRVTGREERVVAVAELPA-EFVESWDFEY 280 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 + + + + ++R+ H+ F ++ + KL P Sbjct: 281 DVDSVEPLLFLLRRFLDTLGARMRAGHKVAAFARVELRLAYGEPVVVE------QKLPEP 334 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 T D+ + L+ + + L + QL LF+ + P + Sbjct: 335 TSDAGALFGLLAARLEEVEAES-PVAAMELRL-EVADFRERQLGLFESSLKNP--YRFTQ 390 Query: 376 VMDTLNAKEGRGTLYFAGQGIQQQ 399 + + G + ++ Sbjct: 391 TLSRVAGIVGEDRVGRPVVIEDER 414 >UniRef50_Q75EE5 AAR136Wp n=1 Tax=Eremothecium gossypii RepID=Q75EE5_ASHGO Length = 617 Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 34/142 (23%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A DVNAF+A E V PVV + VIA + + G+ D + Sbjct: 26 VAHIDVNAFFAQVEQVRCGYGKDDPVVCV--QWSSVIAVSYACRKYGITRLDSVAEAMKK 83 Query: 62 FR--------------------------------RCGVVCFSSNYELYADMSNRVMSTLE 89 + + Y S +++ ++ Sbjct: 84 CPTLIPIHTAVFKKGEDFWQYHDGYGPWNTDPSRQLDPAIHKVALDPYRRESRKLLKMIQ 143 Query: 90 ELSPRVEIYSIDEAFCDLTGVR 111 + P VE SIDE F DL Sbjct: 144 KRCPIVEKASIDEVFVDLGPQC 165 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 40/252 (15%), Positives = 75/252 (29%), Gaps = 39/252 (15%) Query: 103 AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 +F D V C + +R V T G+++TK+++KLA++ K + Sbjct: 220 SFLDWDDVIMCLG-SRLALALRQEVEDALGYTTSCGVSRTKSVSKLASNYRKPNAQ---- 274 Query: 163 VVDLSNLERQRKLMSA--LPVDDVWGIGRRISKK---------------LDAMGIKTVLD 205 + + + W +G I K+ L A+ ++ Sbjct: 275 --TIVRNAAVETFLDQGGFELPSFWTLGGAIGKELLDLLELPPAGSIPALRALCPESPEQ 332 Query: 206 LADTDIRFIRKH---------------FNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 L +R IR + + +RG C+ + Sbjct: 333 LHACLLRRIRDRPLPHDAAPYLIDEQAAEALATKLFYLVRGTHCVPVNPRPTVSSMTSRK 392 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 G + ++A A +L+ HQ I + A + S S Sbjct: 393 NMRGNACKSLADCHPWLEVFSAELAGRLQDLHQEYDRIYLPRTLTVAAQGRAHQRVSRST 452 Query: 311 KLLTPTQDSRDI 322 L PT + + Sbjct: 453 GLHAPTGNVTAL 464 >UniRef50_Q6CYA8 KLLA0A01848p n=1 Tax=Kluyveromyces lactis RepID=Q6CYA8_KLULA Length = 645 Score = 90.6 bits (223), Expect = 9e-17, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 43/149 (28%), Gaps = 34/149 (22%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A DVNAF+A E V PVV + ++A + A+ V + Sbjct: 26 IAHIDVNAFFAQVEQVRCGFSRDDPVVAV--QWTSILAVSYAARKYNVSRMESILDAIKK 83 Query: 62 F----RRCGVVCFSSN----------------------------YELYADMSNRVMSTLE 89 V E Y S +++ + Sbjct: 84 CDKIIPIHTAVFRKGEDYWQYHDGCGSWVEDESKKLSPTNYKVALEPYRRESRKLIKLFQ 143 Query: 90 ELSPRVEIYSIDEAFCDLTGVRNCRDLTD 118 + VE S+DEAF +L L D Sbjct: 144 DEYDLVEKASVDEAFIELGRKLFYELLMD 172 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 87/285 (30%), Gaps = 55/285 (19%) Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS--ALP 180 IR + T GI+ TK L+KLA++ K + + + Sbjct: 238 IRNQIDDMLGYTTSCGISMTKNLSKLASNYKKPNAQ------TIVKNNCIDDFLDCGKFE 291 Query: 181 VDDVWGIGRRISKKL-------DAMGIKTVLDLADTDIRFIRKHF--------------- 218 ++ W +G K+L IK + D IRK Sbjct: 292 INSFWTLGGIRGKELIDLMELPKEHSIKFIRDSWPVSSDDIRKFMLKKIICRDIQRSREY 351 Query: 219 -------NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYA 271 + + + +RG+ L +E K + + + + + Sbjct: 352 NINEADVAKISAKIYQLVRGQFRLPVEPRPLPKSMMSKKNLRNDDCASVIDCIEWLEIFC 411 Query: 272 ARAAEKLRSEHQ------YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 + ++ Q R I IK Y + + + + SR++ Sbjct: 412 SELNYRVHDLEQEYEKVIMPRTIVIMIK----GKAGMKYTQTRRITTASSSITSRELFIN 467 Query: 326 ATRSLDAIWQAG------HRYQKAGVML--GDFFSQGVAQLNLFD 362 AT+ ++ I + + ++ + L D +G L++F Sbjct: 468 ATKLINEIDKQHGKLAGVYPLRELSLTLSNFDIIDKGKTVLDMFG 512 >UniRef50_C5IWL2 UV repair DNA polymerase n=21 Tax=Gammaproteobacteria RepID=C5IWL2_ECOLX Length = 102 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 48/75 (64%), Positives = 57/75 (76%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FYASCE +FRPDL PVVVLSNNDGCV+AR+ EAK LG+KMG P F+ K Sbjct: 16 VFALVDCNNFYASCEKLFRPDLKDTPVVVLSNNDGCVVARSREAKLLGIKMGVPVFQIKA 75 Query: 61 LFRRCGVVCFSSNYE 75 +R G++ FSSNY Sbjct: 76 EMQRHGILAFSSNYA 90 >UniRef50_A7VU61 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU61_9CLOT Length = 150 Score = 90.2 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 7/138 (5%) Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 M+ + A A +LR + R I ++ + + + LL+ T + +I Sbjct: 1 MKMILYVLADSVARRLREQGLKGRTIHISVRDNS------LFSFTRQKTLLSYTNLTGEI 54 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFF-SQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 A ++ + G+ + D +Q LF D R E+L +D L Sbjct: 55 AREALSLFREHYRWKRPVRSIGISVSDLAADTICSQTGLFCDEVKREKMERLDKALDRLK 114 Query: 382 AKEGRGTLYFAGQGIQQQ 399 + G + A ++ Sbjct: 115 VRFGTFAVQPAVLLKDRK 132 >UniRef50_UPI00006CB3A6 hypothetical protein TTHERM_00659050 n=1 Tax=Tetrahymena thermophila RepID=UPI00006CB3A6 Length = 455 Score = 89.4 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 41/367 (11%), Positives = 113/367 (30%), Gaps = 29/367 (7%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D R +P +L N+ + N +A LG+++G + +++ Sbjct: 60 LHLD-------VLLSERQQDKNQP-CILINSSNQICQLNNQAFQLGIRVGMNTSEIENII 111 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIY----SIDEAFCDLTGVRN---CRD 115 + ++ N + ++ N ++ L+++ VE+ +I D+T + Sbjct: 112 QNI-LILKMQNQQSSQEVFNSILRYLQQIDKDVEVDFNNKNIYYFLIDVTNYMTEKGFEN 170 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 D I + + GI L+ LA + Q + + + + Sbjct: 171 PADIASSIANYIHNEFKVESFCGIGANTLLSFLAAQMSFHSILQNSCISRI---QEIKDF 227 Query: 176 MSALP--VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER-TVRELRGE 232 +S L + + + + L+ M I ++ D+ + ++ I + F + ++ G Sbjct: 228 VSHLHLDIKMMTNLSESLLASLEKMRIMSINDI-NNNLIQIYQTFPQNVTNSLLQIYYGV 286 Query: 233 PCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 ++ SR ++ + + ++ + + + Sbjct: 287 SRNYHN-VQVEIDQLKVSRMLKLGEYSIQQLQYLVDQIVEQITLDMKHYKRIAKIAKLQL 345 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 L + + + + L ++ QK + + + Sbjct: 346 TKIDHT-----NIVVKREILRIDSDYFDLLKSECFQMLKSLQIQNLLLQKITIQVFEMIP 400 Query: 353 QGVAQLN 359 + Sbjct: 401 IDSIINS 407 >UniRef50_Q4QCF2 DNA polymerase eta, putative n=3 Tax=Leishmania RepID=Q4QCF2_LEIMA Length = 760 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 50/139 (35%), Gaps = 25/139 (17%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D++ FYA E V D P+V+ + G +IA N A+A GV+ + + Sbjct: 17 IAHMDMDCFYAQVEAVRLGVDCRVTPLVL--SQWGSLIAVNYPARARGVRRFSNVSEAQA 74 Query: 61 LFRRCGVVCFSS---------------------NYELYADMSNRVMSTLEELSPR-VEIY 98 L V S + E Y S ++ S L VE Sbjct: 75 LCPGLIVALSPSYRMGEAVSQYHPHPVQDSYKLSLEPYRHASRQIFSILAATPGVQVEKG 134 Query: 99 SIDEAFCDLTGVRNCRDLT 117 S+DEA+ D+T Sbjct: 135 SVDEAYVDVTEAARRELAE 153 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 76/271 (28%), Gaps = 60/271 (22%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + +R + H GIA + LAK + K Q+ L +R Sbjct: 240 ASRVVHRLRQRIYAELHYDCSAGIAHNRVLAKCISATHKPNQQ------TLLLPDRSASA 293 Query: 176 MSALPVDDVWGIGRRISKKLDAM--GIKTVLDLADTDIRFIRKHF--------------- 218 + LP+ + G G ++ + A+ G+ + + +RK Sbjct: 294 LFELPLSGLRGFGGKLGAAVSAVCGGVTECREAWLVPLAQLRKLDGTCDVGDGEDAEGDR 353 Query: 219 -----------------------------NVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 + LRG + P + II Sbjct: 354 EGRKRRPIARKRGRAASASLERDLQGLVAHTTSLYVFYRLRGLAEDTIL-NRPLSKTIIA 412 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRS----EHQYCRFISTFIKTSPFALNEPYYG 305 S++FG T +R+ I + + R + + F Sbjct: 413 SKNFGRITTSVEMVRRWIIVLTSELCSRYEEFTALYQIRGRSFNIKLGNDGFRSTGGLS- 471 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQA 336 S +V L Q + A R + A+++ Sbjct: 472 -SHTVALPEAMQ-PDILAAVAMREVQAVFRN 500 >UniRef50_Q15ZX1 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15ZX1_PSEA6 Length = 484 Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 114/387 (29%), Gaps = 25/387 (6%) Query: 19 RPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA 78 + P+V+L G V N A+ G++ L G+ N E+ Sbjct: 36 HKSISSIPIVILDTAHGIVQ-LNKCARQAGIQPFMSLGTAAAL--HGGLQVMPFNPEIEK 92 Query: 79 DMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVG 138 + + L + + +S + + + + + L +++ Sbjct: 93 QQLSIIAQRLYMVVSDICFFSEQGLLLRVHNMLRLYSSLNELWSMIKSQLVPLNVSFSYA 152 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 + AKL G + + + + + + + KL+++ Sbjct: 153 TGHSPLAAKLLA--------VKGWNQITDEPAAIQHALKKVDLS-LTELSSKDVTKLNSI 203 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 G+KTV L + K F+ + + +LRG+ + F P I Sbjct: 204 GVKTVEQLLIIPFSDLHKRFDTQMITYLGQLRGDFKHPVIFFHPQA-NFKQYIELLYEIE 262 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 + + I + L + + + + + ++ + + + Sbjct: 263 RTDLLLKPIQKLLSNLENFLLLRDELTQELRIIL----YQRDKSKIEFTVRAQQGEY-RA 317 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 + A + + G F + + +LF QL + Sbjct: 318 KDWLGLLALKL--ENVLLNAPIIALQLSTGKTFVRHPDKQDLFLGKQGVVSRLQL---IS 372 Query: 379 TLNAKEGRGTLYFAGQGIQQQWQMKRA 405 L AK G L+ ++ +RA Sbjct: 373 ALQAKLGDDVLF--SPQTINDYRPERA 397 >UniRef50_B6AK40 DNA polymerase eta, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AK40_9CRYT Length = 717 Score = 88.6 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 20/131 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D++AF+ + KP+VVL VIA N KA G+K G + Sbjct: 75 IIALIDMDAFFTQVQHKICNIPKDKPLVVL--QRNTVIAVNYPGKARGIKRGMKLQEALS 132 Query: 61 LFRRC----------------GVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDE 102 ++ + E+Y + S + + P +++I SIDE Sbjct: 133 IYPDLAVPETTYYNDKIEDNNNYNIKKISLEIYREASREIFDNIANYIPKCKIQISSIDE 192 Query: 103 AFCDLTGVRNC 113 A+ DL+ Sbjct: 193 AYIDLSENIKL 203 Score = 74.8 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 90/281 (32%), Gaps = 30/281 (10%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 +R +LQ + T GI+ K LAKL K + + + Sbjct: 301 GATIIYRVRNRLLQDLNYTCSAGISINKMLAKLVCSLRKPNGQS------VLLSRWINQY 354 Query: 176 MSALPVDDVWGIGRRISKKLDAM--GIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGE 232 M LP+ + +G ++ K + ++ DL + + K F E RG Sbjct: 355 MGILPILKLRLLGGKLGKLVSEKLPMVRMSSDLLQYNKGTLIKLFGEKNGEYLYNTCRGI 414 Query: 233 PCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + E + I+ S++F + + + + + +++ +E+ ++ ++ + T + Sbjct: 415 DLEAVIETQH-YRSILSSKNFYSGLDNLDEIFKWLHIFSSELSERSKNLYKTLKIRPTKV 473 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL-DAIWQAG-------------- 337 + S+ T ++ I A + ++ Sbjct: 474 GVTIRNKLSQNRTRVQSINYSDHTPNTDIIYKTAKFIFLNRFYEPNNSNIQKKESDINIS 533 Query: 338 -----HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 + GV L + L D + + +L Sbjct: 534 YIKDIFPCKYLGVSLHNLIKNDSKFDILQFDISNNKTNNKL 574 >UniRef50_B9WB35 DNA polymerase eta, putative n=3 Tax=Candida RepID=B9WB35_CANDC Length = 642 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 24/130 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D+NAF+A E + PVV VIA + + G+ D K Sbjct: 48 VIALIDLNAFFAQVEQIRLNLTDQDPVVCA--QWNSVIAVSYACRKFGITRMDSIASCKS 105 Query: 61 LFRRCGVVC----------------------FSSNYELYADMSNRVMSTLEELSPRVEIY 98 + + + Y S +++ + + E Sbjct: 106 KCPNVIIAHAAVYKKGESHWAYIEGLPTINNHKVSLDPYRRESRKILRIISKSFDLTEKA 165 Query: 99 SIDEAFCDLT 108 S+DE + DL Sbjct: 166 SVDECYIDLG 175 Score = 67.8 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 62/171 (36%), Gaps = 15/171 (8%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + E+R + T G+A+TK +AKLA K + + Sbjct: 253 GSQILLEVRKDIFAELGYTTSAGLARTKQVAKLAAGFKKPDAQ------TIIRNSAINSF 306 Query: 176 MSALPVDDVWGIGRRISKKLDAM-----GIKTVLDLA-DTDIRFIRKHF-NVVLERTVRE 228 ++ + DV G+G ++ + + I ++ + + I I++ + + Sbjct: 307 LTNFELTDVTGMGGKLGESIINKINVPPQINSISFIRENFSIDSIKEKLGGELGLKVYNI 366 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKL 278 RG ++L+ + + +++F + + + +A +L Sbjct: 367 CRGTNAIELQSLI-EVKSMTSTKNFTSFSVNNLFDAYDWLKVFAGDLHNRL 416 >UniRef50_C1D2K9 Putative Y-family DNA polymerase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D2K9_DEIDV Length = 423 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 61/374 (16%), Positives = 108/374 (28%), Gaps = 44/374 (11%) Query: 16 TVFRPDLWGKPVVV----LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 P G PV V S V+ + A+ GVK+G Sbjct: 23 QRRHP---GVPVAVLSEEGSGGGRRVLHVSPGARDAGVKVGMRDTAALSRCPELHAETM- 78 Query: 72 SNYELYADMSNRVMS-TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 N L A N ++ S RVE + F L+ D Sbjct: 79 -NAPLAAAAWNELLEQMYVRYSDRVEGRTPGLIFLKLS----LGAARDLAAA-------- 125 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN-LERQRKLMSALPVDDV--WGI 187 L VG+A + +A LA AK G V ++ + ++ ++ +P++ + G+ Sbjct: 126 --LQAPVGLAGSLEVAHLAALRAK-----AGEVREVHPGEQAEQAFLNLVPLEHLQVLGL 178 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQE 246 +++L +G+ + DL V + + R L+G QL Q Sbjct: 179 SPAQAERLRFLGVTGLADLCKWSAAQREAFLGVDMGTQVNRFLKGHRTEQL-PRYVPGQI 237 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 + S + + A LR + +++ + Sbjct: 238 LEASLDTDAPLLNSLEADAAFQELLPGLMTGLR--GRTAAYLTVRC-------DTLGGSL 288 Query: 307 SASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 +A+ KL P ++ A +L+ + V Sbjct: 289 TATRKLKWPLDSGG-LMRVAGLALEDTGALAIGIDRLSVQFSGLQQPSRMVGLWAGLADL 347 Query: 367 RPGSEQLMTVMDTL 380 L D L Sbjct: 348 DVTRNVLDRFPDAL 361 >UniRef50_C8Q3E7 Damage inducible protein P (DNA polymerase IV) (Fragment) n=4 Tax=Enterobacteriaceae RepID=C8Q3E7_9ENTR Length = 167 Score = 87.5 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 12/175 (6%) Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 G+ +KKL+ MG+ T D+ TD+ + K F G + ++ + Sbjct: 1 GKVSAKKLEEMGLLTCGDVQQTDLARLLKRFGKFGRVLWERSHGVDERGVV-VERERKSL 59 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH--QYCRFISTFIKTSPFALNEPYYG 305 R+ E I + + I +L + +K + F L + Sbjct: 60 GVERTLMEDIHSWEQCLEIIDYLYEELERRLTRIRPDKLIARQGVKLKFNDFQLTTQEHI 119 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P + D+I A ++ D +AG + G+ + Q QL L Sbjct: 120 W--------PVLNKEDMIAVARKTWDE-RRAGRGVRLVGLHVTLVNPQLERQLLL 165 >UniRef50_B9ZJT1 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJT1_9GAMM Length = 478 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 49/373 (13%), Positives = 110/373 (29%), Gaps = 23/373 (6%) Query: 22 LWGKPV-VVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADM 80 L +P+ V+ CV A N A+ G + G + + + + Sbjct: 23 LTERPLLVIEDGTAPCVHAANRAARRAGARPGMALADALAILDTPEL--VEHDPQAQTAQ 80 Query: 81 SNRVMSTLEELSPRVEIYSI-DEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGI 139 + L + S V ++ R RE L+ +G+ Sbjct: 81 IAMLAGVLLQFSDHVHPEPDARRILLEVGRSRRLFGGLAVLREQARETLEGLGFHPRIGV 140 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A++ A+L + + E R+ +S +P++ + + + L A G Sbjct: 141 ARSPAAARLLATLRNPAIPE--------DAEALRRTLSPVPLEALP-LPAATREGLRATG 191 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 ++ + DL + + L + L + E+ I Sbjct: 192 LRQLGDLLRLSRPELARRHGPELLALLDRLL-GRRTETLPRFNPPPELDLPLRLEHEIHT 250 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 ++ + +A +LR ++ + ++ +K +++ P + Sbjct: 251 TGALAFPLKRLLRQAEAQLRGLNRSLQGMTLELK-------HREVHTRITLERGHPGIRA 303 Query: 320 RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNA-PRPGSEQLMTVMD 378 D + L+ + +L + P QL V+ Sbjct: 304 EDWLPLWQTRLEREALP-APVIGLRLRATQLLDPPAEGASLLAEAPGHPPPESQLPAVLA 362 Query: 379 TLNAKEGRGTLYF 391 L+A+ G + Sbjct: 363 RLSARLGEQAIVR 375 >UniRef50_D2LKG4 DNA-directed DNA polymerase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKG4_RHOVA Length = 109 Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 1/103 (0%) Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +GI TK LA +AN AKK GV +L ++ +++ + V D+WG+GR+ S L Sbjct: 5 TIGIGCTKALATIANRMAKKDPEAK-GVFNLFDVADIDAVLAKIEVGDIWGVGRQWSAWL 63 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + GIKT LDL TD R +R VV ER REL G CL LE Sbjct: 64 EEQGIKTALDLKRTDPRHVRTKMTVVGERIARELNGVSCLPLE 106 >UniRef50_A1WXU5 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXU5_HALHL Length = 432 Score = 85.6 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 90/327 (27%), Gaps = 22/327 (6%) Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLT-VGVGI 139 ++ EL+ + + D F ++ G + ++ L+ + Sbjct: 31 LEQIALWGLELTHQASLEPPDTVFLEVGGSQRLFGGRAAIQQRAQEGLRELGQPRAALAA 90 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A T A+L A + L++ + R+ + LP + L +G Sbjct: 91 APTPQGARLLARA--------SPGIWLTDRQSLRRALMPLPC-HLLDPTPAQQSALSTLG 141 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 + + D +R+ RT+ + GE P Q Sbjct: 142 LTRLGDCLRMPRSGLRRRIGDPPIRTLEQALGERPEP-RRCIPPPQRYRGRLELPAPTAA 200 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 + A+ LR + + ++ G PT+D Sbjct: 201 TQATGFALQRLLRALVGMLRGLDAGIQQAAVALEHPDGPDTRLTLGFLR------PTRDL 254 Query: 320 RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 + + A L+ + +LF+ E + T+ + Sbjct: 255 EHMAHIARHRLERQALPDVA-TAVRLEADQLLPYQGTSGDLFERTGADG--EAVRTLSER 311 Query: 380 LNAKEGRGTLYFAGQGIQQQWQMKRAM 406 L A+ G + + +RA Sbjct: 312 LIARLGADCVQRLATYPDPR--PERAW 336 >UniRef50_A3WNS1 DinP DNA polymerase-like protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WNS1_9GAMM Length = 471 Score = 85.6 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 49/378 (12%), Positives = 118/378 (31%), Gaps = 25/378 (6%) Query: 16 TVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 +P + PV ++ + ++ N A + G+++G L VV + Sbjct: 18 QRLQPQIQPLPVALVYQEHQKEWLLQCNETALSQGLEVGHSTVLAHTLV--NDVVLMPYS 75 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 E + + R+ L + ++ +L + T + L + Sbjct: 76 EEKESRVLTRLAERLYLSVDKQVLFKPQGIAIELDSLLKLYQGTQPLIDHLKEELDTLGV 135 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL-SNLERQRKLMSALPVDDVWGIGRRIS 192 + + + + A+ G+ L ++ + LP+ + + +I Sbjct: 136 SYQMSLGFSARSAQCLA---------CAGIEQLSTDRCVIEHELGHLPIKQLL-LSSQIE 185 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 K+L + GI + L I K F + ++ L+G + F P I Sbjct: 186 KRLLSTGIHQLKQLWSLSAADIGKRFGAGMVDDIQRLKGNESQAFDFFRPRDAFITQ-LD 244 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 I + M + + L + R ++ ++ S +KL Sbjct: 245 LVTEIQHWQGMLFPLKRLLQELEQFLYQRQKVIRQLTIELQHRDMEP------TSVPLKL 298 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 + + + + +N ++ + + + F +L + Sbjct: 299 ASDSWRASEFLNLLQLQMNR-YPLTAPVIAIEMRALELFELTRDSGSLL--TKGVAHQQT 355 Query: 373 LMTVMDTLNAKEGRGTLY 390 + ++ L A+ G +Y Sbjct: 356 VTELVSRLQARLGEKAVY 373 >UniRef50_Q56YN7 Putative uncharacterized protein At1g49980 n=1 Tax=Arabidopsis thaliana RepID=Q56YN7_ARATH Length = 402 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 11/181 (6%) Query: 173 RKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 +S LPV + GIG+ L A+GIKT ++ + + G Sbjct: 1 MTFVSFLPVRKIGGIGKVTEHILKDALGIKTCEEMVQKGSLLYALFSQSSADFFLSVGLG 60 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 +++ I R+F D + + A + ++ E R ++ Sbjct: 61 LGGTN-TPQVRSRKSISSERTFA-ATGDERLLYSKLDELAEMLSHDMKKEGLTARTLTLK 118 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 +KT+ F + S +V L T S DI+ AT+ L A + + G+ + F Sbjct: 119 LKTASFEIR------SRAVSLQRYTCSSDDILKHATKLLKA--ELPVSVRLIGLRMSQFV 170 Query: 352 S 352 Sbjct: 171 E 171 >UniRef50_A8GJ69 UV protection protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GJ69_SERP5 Length = 136 Score = 84.8 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 68/162 (41%), Positives = 92/162 (56%), Gaps = 30/162 (18%) Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 M QA+C Y AAEKLR E QYCR I+ F++TSPFA N+PYY NS SV+L+ TQD D+ Sbjct: 1 MHQAVCQYVEHAAEKLRGERQYCRHITVFLRTSPFASNDPYYANSNSVQLMLATQDKCDV 60 Query: 323 INAA--TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + A ++ +A W+ G+RYQ+AG+ML DF + Sbjct: 61 VAVAGAVKTHEATWRDGYRYQRAGIMLNDFCDINHS------------------------ 96 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 G G ++FAGQGI + W M+R +LSP Y TR SD+ + Sbjct: 97 ----GLGNVWFAGQGINKAWAMRRELLSPSYITRLSDIPNAR 134 >UniRef50_Q67N70 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67N70_SYMTH Length = 539 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 32/236 (13%), Positives = 79/236 (33%), Gaps = 7/236 (2%) Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 + + + + ++ LPV + + + ++L +GI + + A + + + Sbjct: 295 IVSPGAEARFLAPLPVTFLP-LPPEVQRRLQQLGITRIGEAARVSEDEWARQLGLQGRQI 353 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 R RG ++ P ++ + RS + D + + + AA A +L + C Sbjct: 354 SRWSRGIDPEPVKPAWPPRR--LARRSELGGVRDRDPLERELSRSAALLAAQLDRRGEGC 411 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 + + ++ + + P Q ++A L + Sbjct: 412 QQVGLILELADGRVLHAERTLPRLRHTAYPIQQG---LHALLTQLLDGLRESVEVAAVTA 468 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 +G Q+ L+DD R E++ + L+ + + W+ Sbjct: 469 EVGLIGPVDWRQMELWDDRLLRERRERIEGALSLLHQRFPARVIGLG-MHTPTSWR 523 >UniRef50_C5CKZ3 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CKZ3_VARPS Length = 445 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 90/334 (26%), Gaps = 20/334 (5%) Query: 70 FSSNYELYADMSNRVMSTLEELSPRVEIY----SIDEAFCDLTGVRNCRDLTDFGREIRA 125 + + + + + + + +PRV + +L E Sbjct: 11 LPDDPQPRTEALDGLATWCLQFTPRVAVLEALLPCPAVVMELEQSLRLFGGKRRLVERVR 70 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + + A T A A +L+ ALP++ + Sbjct: 71 EECPDLGVR-QLSWAPTSLAALAVARAGLSNGFAKP----------LAQLLDALPIETLT 119 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ 245 + L +G +T+ + + + F+ L T+ + G + Sbjct: 120 QVA-AHQATLARLGCRTLGQVRALPRGGLSRRFDAQLLATLDQAYGLRPETYSWAQLPE- 177 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYG 305 R+ P+M + A L + + G Sbjct: 178 TFHAKLELMARVEHAPAMLFGARRLMLQMAGWLMARRSGVTAFTLRWCHDAMRARTAGDG 237 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNA 365 +V+ T+D+ ++ L + ++ + S L++ + Sbjct: 238 GELTVRTAQATRDTEHLMRLLAEHLGKVELL-APVGDLELLATEVQSLEEKSLSMLPEA- 295 Query: 366 PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 R E L V++ + A+ G + + Sbjct: 296 -RQSGESLALVLERIAARLGPDRVLRPVILEDHR 328 >UniRef50_B6K9Y1 DNA polymerase, putative n=1 Tax=Toxoplasma gondii ME49 RepID=B6K9Y1_TOXGO Length = 1613 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 5/94 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKA--LGVKMGDPWFKQ 58 + D++ FYA E + P + GKPV V ++ N A+ V+ G + Sbjct: 205 VIIHVDMDCFYAQVEELLDPSIVGKPVAV--RQKQLIVTSNLVARQKPWQVRKGIYMPEA 262 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 VV + + Y +S++++ L+E + Sbjct: 263 LRRCPSL-VVKNGEDLDKYRRVSDQILHALQEKT 295 Score = 78.2 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 6/117 (5%) Query: 103 AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 A+ + T IR + LT GI+ K+LAKLA K ++ Sbjct: 606 AYLPCPCLLPLAIATHLASAIRRYIGTHMGLTSTAGISTNKSLAKLAGAFNKPSRQ---- 661 Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 L + +R ++ L + + G+G + + L G++T DL + + Sbjct: 662 --TLLLPQHRRGFLAPLALQKIPGVGSALVRLLSRAGLRTCADLLAVSLPRLAAILE 716 >UniRef50_UPI0001913C3A DNA polymerase V subunit UmuC n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. AG3 RepID=UPI0001913C3A Length = 110 Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 1/110 (0%) Query: 103 AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG- 161 F D+ + +C D DFGR++R V T LT+GVG+ TKTLAK A A+K+W++ G Sbjct: 1 MFLDVRNIDSCIDFEDFGRQLREHVHSGTGLTIGVGMGPTKTLAKSAQWASKEWRQFEGV 60 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI 211 + N +R KL+S PVD++WG+GRRISKKL MGI T L LA + Sbjct: 61 LALTSGNPKRTEKLLSLQPVDEIWGVGRRISKKLHTMGITTALQLARANP 110 >UniRef50_B4UDR0 Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. K RepID=B4UDR0_ANASK Length = 569 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 56/379 (14%), Positives = 95/379 (25%), Gaps = 32/379 (8%) Query: 27 VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 + VL V+ A+A GV+ G + + + + Sbjct: 38 LAVLEEGR--VVCCTPAARAAGVRPGQSAAEALAAC--GRLETVVRDAAADLAALRALAE 93 Query: 87 TLEELSPRVEIYSIDEAFCDLT-------------GVRNCRDLTDFGREIRATVLQRTHL 133 L ++P VE+ + D D + Sbjct: 94 VLLGIAPAVEVVAPDALLLDAGAARLLAAGPGAGAPSAAFGPGEERLARRAVQAAVDMGY 153 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 +A + A R G V ++ A G+ ++ Sbjct: 154 AARAVVATGRGPATALAR----HGRFDGAVHGVAPGGVAAAAALAGLPLAALGLAPAVAG 209 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 +L A+G+ LA + F R R RGE L P S Sbjct: 210 RLAAVGVGDAGALARLPEGTLAHRFGPEGVRAARLARGEDVSPLVPHVPET-LPQESLEL 268 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 + + A R A +L + + P V L Sbjct: 269 EAPAESAEPLLFGLKRLADRVAARLAGRGLGATRLRLVLALDPRGEER------IQVPLS 322 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 P+ + + L A+ G ++ + QL D L Sbjct: 323 QPSASAARWLVPVKEHLFALRLPG-AVTALRLVAAEVAPVAAEQLAFGDRPEAV---AAL 378 Query: 374 MTVMDTLNAKEGRGTLYFA 392 V+ L + G G L+ A Sbjct: 379 EGVLARLAVRLGDGALFAA 397 >UniRef50_B3L3B7 Putative uncharacterized protein n=1 Tax=Plasmodium knowlesi strain H RepID=B3L3B7_PLAKH Length = 1500 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 64/169 (37%), Gaps = 15/169 (8%) Query: 1 MFALCDVNAFY--AS----CETVFRPDLWGKP--VVVLSN-----NDGCVIARNAEAKAL 47 ++ D + ++ AS CE G + V + + V A N K Sbjct: 597 VYLYIDFDNYFLNASVKSACEQCDNNKKIGSNEILCVCHSLKKEDSYSIVSATNYWGKKN 656 Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 + G ++ ++ + + ++ S + L S V + S+DE+ L Sbjct: 657 KIHKGMVKWEVTNMHKD-NIRFVKYDFGNILRCSYLFLLVLINYSKNVRVLSVDESIVQL 715 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 N DL ++I + T+L+V +GI+ ++++ A KK Sbjct: 716 -FYENEEDLFLTAKQIAEDIYNLTNLSVSIGISSNLSMSRKALKFCKKR 763 >UniRef50_C8WVC3 DNA repair nucleotidyltransferase/DNA polymerase-like protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WVC3_ALIAD Length = 402 Score = 83.2 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 100/352 (28%), Gaps = 36/352 (10%) Query: 40 RNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYS 99 + A GV+ G P + L C V S + L +P VE + Sbjct: 31 ASRTAARAGVRPGIPVREALALVPGCHVESASGESTS----WRHLRQVLWSHTPWVETH- 85 Query: 100 IDE--AFCDLTGVR-NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK-- 154 DE + +L+G R +L R+IR + + V + +A+T A++ ++ Sbjct: 86 PDERRFWIELSGPRVPLAELRQMARDIRLGLTEEQ--RVVLALAKTPWQARMLLAWSRQE 143 Query: 155 --------KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 K + V P+ W I +L ++G+ + DL Sbjct: 144 RVPGALYRKLGTEPLVVAPDLLNRDAEAFWIRAPIAASWWIPDDAKAELLSLGVFRLKDL 203 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD--YPSMR 264 A+ + F R R G L P + S S+ + Sbjct: 204 AEIPEDVLCARFGEQA-RIWRM-NGMGKTSLRPDRPPE---AWSASWRGDAEGVPLEQAK 258 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 + L + +S + + ++ PT + Sbjct: 259 MRVRLCLENLCGHLARFGLAVQTLSIALWAEAREIR-------WQKRIAKPTPRPDALW- 310 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 A + R + + Q++L + E + Sbjct: 311 -AQMAWPEEVHRAQRIWSVELCATEVAQLRPVQVSLLEQGEALDALEARDSA 361 >UniRef50_B1XYC2 Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XYC2_LEPCP Length = 547 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 114/389 (29%), Gaps = 36/389 (9%) Query: 30 LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLE 89 V+ NA A+ALGV+ G + L + + + + A + R+ L Sbjct: 37 AGGRTRTVLIANAAAQALGVQAGQRLGSAQALAPQA--LVLARDPAREAALLERLALGLG 94 Query: 90 ELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLA 149 LSP+ I D D+ +++ + +A T A+L Sbjct: 95 SLSPQRVIEPPD-LLLDIHASLRLFGGLRPLLRRADRLVRAQAVQPRWSLASTPLAARLL 153 Query: 150 NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR-------------------- 189 H A QRQ V S R L AL G Sbjct: 154 AH-APPAQRQRRCVQLRSTRRRVLALPLALLGAWGLPCGATDTERRAADGPADAAGVAAR 212 Query: 190 -------RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 + L A+G + + DL +R+ + G+ P Sbjct: 213 RVAAAHIATLEMLHALGARCLADLQRLPRAGLRRRGAQDWVDALDRALGDQPDPRRCHEP 272 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 + + R P++ A L + + +S ++ ++ Sbjct: 273 PE-AFALALELPWRADAVPAIEAAAAPLVQALCGWLALRWRAAQGLSLILRH-DYSSRRS 330 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 + L TP++++R + L + A + L + L+ Sbjct: 331 LPDQVLRLDLATPSREARHLQTLLREHLQHLVLA-APVDAITLQLDTSLPEAGRPTTLWP 389 Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 D + + ++D L A+ G + Sbjct: 390 DAHQQAQAHT--NLVDRLQARLGAAQVRR 416 >UniRef50_C4ZK47 Putative uncharacterized protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZK47_THASP Length = 505 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 49/348 (14%), Positives = 95/348 (27%), Gaps = 18/348 (5%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+ +L + G V+A +A A A G++ G L + A+ + Sbjct: 25 PLAIL-SPRGRVLAASAAASAAGIEPGQRAASALALLPELRLQ--PHEPAREAEALAEIA 81 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + SPR+ + + D +++ T L T + A T Sbjct: 82 TWAGRFSPRISLSAADAVLLEISSCLRLFGGTAQIESALREGLAELGFTALLACAPTPLA 141 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLE----RQRKLMSALPVDDVW---GIGRRISKKLDAM 198 A+ AA + R + LP++ + + L + Sbjct: 142 ARWLARAAAPSALSCPPTDAALPTDAAGQDWRAALDPLPLELLSEEDACDAATLELLAGL 201 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 G++T+ +L + + R + RGE F + + Sbjct: 202 GLRTLGELRRLPPAGLARRGAQAAARALARARGELADPRPWFEAPLR-FHHGIALPAPEL 260 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 ++ A A A L + H + L P++D Sbjct: 261 HAEALLFAARRLFASLAAWLDARHAAVDRFRLRF------GHGSRPPTELEFALGRPSRD 314 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 L + + + + +LF D A Sbjct: 315 EGHFALIVRERLAMLELS-AEVDSITLCAESPVAADPRARDLFGDPAQ 361 >UniRef50_Q3BNM7 ImpB/MucB/SamB family protein (N-terminal) n=8 Tax=Bacteria RepID=Q3BNM7_XANC5 Length = 98 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 1/84 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D + FYASCE VF+PDL +P+VVLSNNDGC IAR+ EAKALGV MG P K Sbjct: 1 MFALIDGSNFYASCELVFQPDLRDRPLVVLSNNDGCAIARSDEAKALGVTMGQPIHKVPS 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRV 84 RR + S+N+ LY D+++R+ Sbjct: 61 QIRRR-LTLRSANFGLYGDIASRI 83 >UniRef50_Q4HDP3 Putative uncharacterized protein n=1 Tax=Campylobacter coli RM2228 RepID=Q4HDP3_CAMCO Length = 269 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 71/226 (31%), Gaps = 27/226 (11%) Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT---DIRFIRKHFNVVL 222 L + +RKL P++D W IG+ + KL ++GI + DLA + + + F V Sbjct: 45 LDEMLYRRKLWQHTPINDFWRIGKGYATKLKSIGINNMGDLARYSLNNKDKLYQIFGVNA 104 Query: 223 ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI---TDYPSMRQAICSYAARAAEKLR 279 E + G ++ + S+ + + + R + +L Sbjct: 105 ELLIDHAWGFESCTMQ-AIKEYKSKHISKVMAKVLPEPYSFKKARDMLKEIVDHMVLELI 163 Query: 280 SEHQYCRFISTFIKTSP--------FALNEPYYGNSASVK--------LLTPTQDSRDII 323 ++ C I ++ + S+ L T I Sbjct: 164 EQNLTCNQIVLDVQYDKESLEKVQSYNGPMSKDSYGRSIPKNAHSTINLDYHTSSLEAIC 223 Query: 324 NAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA----QLNLFDDNA 365 N D I A +K + L + + +LF D Sbjct: 224 NKGLELFDLIVNADFLIRKISLTLNNVVKNDTIKKIKEPSLFTDLE 269 >UniRef50_C7RN50 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN50_9PROT Length = 497 Score = 81.7 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 41/377 (10%), Positives = 102/377 (27%), Gaps = 20/377 (5%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P ++S V A + + G + + + R+ Sbjct: 22 PSAIVSRERVVVADAAAVSAGV--LPGLRVAEAWAFLPALAIQ--ERDAGRERAALTRLA 77 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + + + ++ G E T + T +A T Sbjct: 78 CWAGGFTSEICVLPPQTLLLEVAGSLRLFGGVAPLFERIVTGCREQGFTSWAALAPTPLA 137 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD 205 A+ G + ++ + + LP+ + + + +L + G+++V D Sbjct: 138 AQWLA--------FAGDREPCLDADQLPQRLGRLPLAVL-DLSAQSRARLASFGVRSVAD 188 Query: 206 LADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 L + + + GE F ++ R+ + ++ Sbjct: 189 LLRLPRAGLARRLGADFAADLARALGELPDPRARFVFPER-FSEQLELPMRVENATALGF 247 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 A L + + + ++ T+D+ I Sbjct: 248 AGRRLITSLCGWLAAR--RGGISECLFEFAHERGARQRSATVLVLRFAGATRDAERIARV 305 Query: 326 ATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN---APRPGSEQLMTVMDTLNA 382 L + + + + +NL + A G E L +++ L A Sbjct: 306 LGEHLQRLELPAAA-ELISLRAEAPEALPGHTVNLLGEYGGGAGGAGGESLAALVERLQA 364 Query: 383 KEGRGTLYFAGQGIQQQ 399 + G G+++ + + Sbjct: 365 RLGSGSVHALSAVAEHR 381 >UniRef50_C2FQ53 UvrA family protein n=1 Tax=Lactobacillus plantarum subsp. plantarum ATCC 14917 RepID=C2FQ53_LACPL Length = 184 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 1/160 (0%) Query: 158 RQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKH 217 T G+ ++ K+ + D+WGIG R++K L+ + I + +L T+ F++++ Sbjct: 24 YTTVGIGEIHYETVPDKIWPITELTDIWGIGPRMAKHLNRLQIHNMYELVHTNPHFLKQN 83 Query: 218 FNVVLERTVRELRGEPCLQL-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 V+ + G QL E + + S+ + I + A Sbjct: 84 LGVISSQIFATSWGVDHSQLTEPIKTKEASLGNSQVLPRDYLAQGELETVIKEIDEQVAA 143 Query: 277 KLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 +LR H+ +S I S A + PT Sbjct: 144 RLRHHHKLAGCLSLSIGFSYTAAEADGRDGFHHAIRIGPT 183 >UniRef50_A9UX99 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UX99_MONBE Length = 381 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 50/267 (18%), Positives = 89/267 (33%), Gaps = 47/267 (17%) Query: 53 DPWFKQKDLFR---RCGVVCF----------SSNYELYADMSNRVMSTLEEL---SPRVE 96 + + L + + F +Y Y S +++ + S +E Sbjct: 1 MKPAEARKLLQPVAGHLLHVFAAPLCAETSGRVSYRPYRLKSRELVAVIRAQLAPSDVLE 60 Query: 97 IYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 + SIDE + L + E+R V T L V GIA K LAK+A+ AK Sbjct: 61 VASIDEVYIARPHTSPLH-LKAWADELRHLVHLHTGLHVSTGIAHNKFLAKIASSLAKP- 118 Query: 157 QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRK 216 G V ++ E + + LP + G+G + L + G+ T Sbjct: 119 ----AGTVVIAGPEEAHRALQTLPAKKLPGLGAK-GPPL-SYGVHT-------------- 158 Query: 217 HFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 F+ L G P + T Q I D ++ + A E Sbjct: 159 SFSPWSIPQFDSLTGLPTGKARLVKKTIQPIKG--------NDLSPIQPMLDDMAHELLE 210 Query: 277 KLRSE-HQYCRFISTFIKTSPFALNEP 302 ++ ++ R ++ ++ A + Sbjct: 211 RIAEHPRRHPRTLTVVVRRPDGAESSH 237 >UniRef50_Q2W1Y7 Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W1Y7_MAGSA Length = 78 Score = 80.9 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Query: 347 LGDFFSQGVAQLNLFDD-NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 + D +LF + LM +D LN+K G+G + + WQM+ Sbjct: 1 MLDLVRPEDIPRDLFSPTPETGEKPKALMAAVDGLNSKLGKGAVGYGLAPKGAPWQMRCD 60 Query: 406 MLSPRYTTRSSDLLRVK 422 +P YTT +L VK Sbjct: 61 NRTPSYTTSWEELPVVK 77 >UniRef50_C1MYC1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MYC1_9CHLO Length = 681 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 3/72 (4%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++ FYA E D P+ V +IA N A+A GVK + K Sbjct: 30 VVIHLDLDCFYAQVEARRLGVDGTSIPMAV--QQWSGLIAVNYPARACGVKRHHTVAEAK 87 Query: 60 DLFRRCGVVCFS 71 L +V Sbjct: 88 KLCPEIVLVHVE 99 Score = 59.4 bits (142), Expect = 3e-07, Method: Composition-based stats. Identities = 42/254 (16%), Positives = 75/254 (29%), Gaps = 35/254 (13%) Query: 70 FSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR---DLTDFGREIRAT 126 + Y S +M L PRVE SIDEA+ D+T + I Sbjct: 160 RKVSLRRYRAASASIMRVLASACPRVEKASIDEAYLDVTAEVDEITRVGGDALTSAIERG 219 Query: 127 VLQRTHLTVGVGIAQT--KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 V + + +A + LA A+ V KL + Sbjct: 220 VAESGVVEPPDVLASDVDRRLAVGAS------------VCADVRRAVFEKLGYTVSGGVA 267 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE-FAPT 243 G + L + T L + R RGE + Sbjct: 268 HNKGGFTAATLSKL---THEALTSAGFE------PKTVAWLTRVSRGEDAEPVTPNACDG 318 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS----EHQYCRFISTFIKTSPFAL 299 + I +SF + +TD + + + ++ +L + + R + + + F Sbjct: 319 VKSINAFKSF-QPLTDRRRVHSWLSALSSELTARLIEDRATQRRTPRSLKLEYRANHFRE 377 Query: 300 NEPYYGNSASVKLL 313 + S S++ Sbjct: 378 S---DMQSKSLRFP 388 >UniRef50_C9Y7V7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7V7_9BURK Length = 488 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 44/369 (11%), Positives = 94/369 (25%), Gaps = 27/369 (7%) Query: 46 ALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFC 105 LG+ L + L D S + +P V D Sbjct: 2 RLGLWKRRRAMHWIALRPSPDAAAAPTEPAL-VDASTALAWWALRFTPLVARVG-DALVL 59 Query: 106 DLTGVRNCRDL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV 164 +++ T +++ + Q HL G T +A A Q V Sbjct: 60 EVSASERLFGGRTALLQQLLESNRQLAHLEYAQGA--TSLIALAALQVHACRVGQAAPVR 117 Query: 165 DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER 224 + ++A + L +G++T L + + F + Sbjct: 118 AVLPDALPVHTLAA---------AQPHLPTLARLGMRTWGQLRALPRGGVVRRFGAEVVD 168 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 + G+ ++ + + P++ A+ LR+ Sbjct: 169 ALDRAYGQRP-EVYPWLTLPDVFDAPLELAASVDSAPALLFGARRLLAQLLVWLRARQSG 227 Query: 285 CRFISTFIKTSPFALNEPYYGNSAS--------VKLLTPTQDSRDIINAATRSLDAIWQA 336 + + N + ++ TQD + L + Sbjct: 228 VLALELLWELDARRANTRHVDAHHQGGQQGRLELRTAEATQDMSHLKRILGEQLARVTLP 287 Query: 337 GHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 + G +L + L ++ L A+ G ++ A Sbjct: 288 -APVLYLRLRSLQTQPLGGESHSLL--PEDVRKGDSLHQTLERLAARLGAHSVQCATPQA 344 Query: 397 Q-QQWQMKR 404 + +M+R Sbjct: 345 DHRPERMQR 353 >UniRef50_A5K6H4 Putative uncharacterized protein n=1 Tax=Plasmodium vivax RepID=A5K6H4_PLAVI Length = 1619 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 60/169 (35%), Gaps = 15/169 (8%) Query: 1 MFALCDVNAFY--ASCETVFRPDLWGKP------VVVLSNNDG-----CVIARNAEAKAL 47 ++ D + ++ AS + P K + V + + A N K Sbjct: 630 VYLYIDFDNYFLNASVKGASEPYGKSKKIDNHEILCVCHSLKKEESYGIISATNYWGKKN 689 Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 + G + + R + ++ S + L S V + S+DE+ L Sbjct: 690 KILKGMVKGEVTKMHRD-NIRFVKYDFSNILRCSYLFLLVLINYSKNVRVLSVDESILQL 748 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 ++ ++I + T+L+V +GI+ ++++ A KK Sbjct: 749 -FYETEEEIFSAAKQIAEDIYTLTNLSVSIGISSNLSMSRKALKFCKKR 796 >UniRef50_A4BIT4 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIT4_9GAMM Length = 463 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 50/385 (12%), Positives = 103/385 (26%), Gaps = 31/385 (8%) Query: 16 TVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 P L +P V+ N A+ GV+ G L C + + Sbjct: 21 QRPLPQLLLQP------GQHTVLQCNDYARDAGVREGMNKKTAFCLLADCAL--AEYDPH 72 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTV 135 ++ + ++ + + + E T LQ + T Sbjct: 73 SEQQALQQLALQCYRHAAQISLQPPSGLLLEAGSMLGVFGGLQPYWESTRTHLQYSGFTW 132 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR-KLMSALPVDDVWGIGRRISKK 194 + T +A+L G+ + + + L V+ + + + I K Sbjct: 133 SMSCGATPAMARLLA---------QAGIELCTQNRTIMLQALDTLTVEQL-DLDKTIQTK 182 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 L AMGI+T L + + F L + L E Q E + Sbjct: 183 LMAMGIQTYPQLKALPRQELGFRFGAALVTQLDRL--EQDNQPPEQFVLPPRFQQTIHLN 240 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 + + L+S C + ++ + +V + Sbjct: 241 YEAEHARGLLFPLKRMLLTLESYLQSRQLLCEKLLIKLEHRDGRASLM------TVPSVQ 294 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 + D + L+ + + DF ++ + D R Sbjct: 295 GSDRQSDWLALLDTYLEQMTLID-PVTAVTLRAKDFRTRQHDSHDFLGD---RFPQADAN 350 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQQ 399 ++ L A+ G + + Sbjct: 351 RMLSLLLARLGEPNVRKLSVQHDPR 375 >UniRef50_C5NXP3 DNA-damage repair protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXP3_9BACL Length = 148 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 52/141 (36%), Gaps = 5/141 (3%) Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + A + A +LR + + + I S + +AS K+ PTQ ++ + + Sbjct: 1 MSEMAEQVAIRLRRVKKKAKSVHIHISYSRIESKK---SINASKKIN-PTQSTKQLTDHV 56 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 + + G + V + + LFDD ++ +DT+ K G Sbjct: 57 LSLFRSKYD-GGAVRSIAVRYDNLIDDNLTIYTLFDDIETIEKQRKIDKTLDTIRDKYGF 115 Query: 387 GTLYFAGQGIQQQWQMKRAML 407 ++ ++ +R+ L Sbjct: 116 LSVQNGSMLMEGSRVKERSKL 136 >UniRef50_A1KCL6 Putative uncharacterized protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCL6_AZOSB Length = 473 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 50/394 (12%), Positives = 115/394 (29%), Gaps = 27/394 (6%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P +++ V + A+A G++ G L + E + Sbjct: 7 PAAAVAHQRIVVG--DGAAEAAGIQPGMRVSSALGLAPGLTLHARDPAREA--AALEALA 62 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 SP++ + DE ++ G + T+ G+A + Sbjct: 63 CWAGRFSPQLSVAGEDELVLEIQGCLRLFGGLAALLGQVREEGEAQGFTLQCGLAPSVLG 122 Query: 146 AKLA--------NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA 197 A+ + ++ L++ LPV+ + + ++LD Sbjct: 123 AQWLARAGIAPAAAMPHAGPPAAADAAQAATVDGLHALLAPLPVEVLR-LPPADQRRLDT 181 Query: 198 MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 +G++ + L + + F L + G FA ++ F R+ Sbjct: 182 LGLRHLGHLLALPPATLARRFGPQLTLQLERALGTVPDPRPPFAFPQR-------FATRL 234 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + A A + + + ++E + T T+ Sbjct: 235 ELPARVDHAAMLLFAARRLAMALAGWLAARAAGVQEYLLVLIHEDAPPTRLVLGFATATR 294 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVM 377 D+ ++ LD A + ++ LF + + V+ Sbjct: 295 DAGRLLRVLRERLDRTTLA-APVVELQLLAETPLPLPGHSAGLFGEAGG----AAIAPVV 349 Query: 378 DTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 + L A+ G+ ++ + + + A SP + Sbjct: 350 ERLRARLGQTAVHALAVVGEHR--PECATRSPDW 381 >UniRef50_Q5CPV1 DinB/family X-type DNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II RepID=Q5CPV1_CRYPV Length = 358 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 27/137 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + +L D++AF+A V KP+ V++NN V+A N ++ GV + Sbjct: 36 IISLIDMDAFFAQVCHVEYNIPRDKPLAVINNN--VVLAVNYPSREKGVNRKMSKEEILS 93 Query: 61 LFRRCGV---VCFSSN--------------------YELYADMSNRVMSTLEELSPRV-- 95 + + V + +++ S V + L+ P Sbjct: 94 ICPEIIIPQNVFLDARGQYLELFNDDNLNMTYQKLSLDIFRKASKMVFTKLKSYLPTCNA 153 Query: 96 EIYSIDEAFCDLTGVRN 112 +I SIDE + DLT + Sbjct: 154 QIASIDEIYFDLTNIIQ 170 Score = 50.9 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 8/92 (8%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R + + T T GI K +K+ + K + + + Sbjct: 273 LIYRARKRLQEETTYTCSSGIFINKIYSKMISSLKKPNGQ------TVLLHRWFESYIKD 326 Query: 179 LPVDDVWGIGRRISKKLDAM--GIKTVLDLAD 208 + + +G ++ K L I+++ DL + Sbjct: 327 THILKLRFLGGKLGKCLIEKFPEIQSIKDLQN 358 >UniRef50_Q0A9P1 Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9P1_ALHEH Length = 437 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 46/327 (14%), Positives = 94/327 (28%), Gaps = 20/327 (6%) Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 + + + S RV + ++ N T L+R T +A Sbjct: 38 LENLAAWAYQYSSRVCPWPPATLVLEIGASLNLFGGLQALLSRIDTGLRRLDRTARRAVA 97 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 T A G L + E R+ + LP+ + + R + L +G+ Sbjct: 98 PTPRGACWLARC--------GQQRILQSPEALRQALDPLPLAVL-DLEPRQHQALHGLGL 148 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 + + D R + + L + + + G L E+ P + R + Sbjct: 149 RRLGDCLALPRRELARRLGPALHQQLDQALGHRPEPLPEWRPPARYRGR-RELVRETDNL 207 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSR 320 + + LR + + + +V L P +D Sbjct: 208 TPLLPLLERLLHELQGLLRGLDAGVPRFELVL------EHLHRPASRLTVGLTEPDRDPE 261 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 ++ A L Q ++ D L A + +++ L Sbjct: 262 RLLRVAGERLAR-EPLAAPVQAITLLAEDIQPLRPEPEALPGTRAAH-DHHPMRVLLERL 319 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAML 407 A+ G + G + + + +RA Sbjct: 320 TARLGETRAH--GLAVHPEHRPERAWR 344 >UniRef50_A4RD58 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4RD58_MAGGR Length = 617 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 21/186 (11%) Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + + IR + Q T GI+ K LAK+ K + T + + Sbjct: 221 KRLLLASHLAYRIRLRIEQE-GYTSACGISVNKLLAKMVGSRNKPRNQTTLLAL---SKA 276 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD---------LAD-TDIRFIRKHFNV 220 + + + GIG ++ ++ T D L + K Sbjct: 277 DTLSFVDQHSLRSLPGIGGSMAAVMEQHTRSTAPDKPLKAGQVRLQHDVSPHLLEKLLQP 336 Query: 221 ------VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAAR 273 + ++T R L G +++ +I ++ +++ + Q + +A Sbjct: 337 LGLEKGIGQKTYRLLHGIDTAEVKFACDFPIQIGIEDTYANTGLSNIAQITQQLIKLSAS 396 Query: 274 AAEKLR 279 ++R Sbjct: 397 LIRRIR 402 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 37/115 (32%), Gaps = 13/115 (11%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + P L PV + + N A+ GVK + +D Sbjct: 56 IILHF--------VVENKEPSLKSLPVGI--KQKSILATCNYVARRRGVKKLMRISEARD 105 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNC 113 + +V + + D S + L S R E +DE F D++ + + Sbjct: 106 ICPDLVLVDGE-DLTPFRDTSKILYRVLRSFSWNDRAERLGLDEVFLDVSDMVSY 159 >UniRef50_C9Y1T2 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y1T2_CROTZ Length = 91 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 62/93 (66%), Positives = 74/93 (79%), Gaps = 4/93 (4%) Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 +DA+W+ GHRYQ AGVM+GD F QGVA+ FD+NAPR SE LM++MD LN + GRGTL Sbjct: 1 MDAVWRDGHRYQMAGVMMGDLFRQGVAR---FDENAPRVNSEALMSLMDKLNQQ-GRGTL 56 Query: 390 YFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 YFAGQGIQQ WQMKR MLSP YTTR +D+ V+ Sbjct: 57 YFAGQGIQQAWQMKREMLSPCYTTRLADVPTVR 89 >UniRef50_B9Q2G6 DNA polymerase iota, putative n=2 Tax=Toxoplasma gondii RepID=B9Q2G6_TOXGO Length = 1309 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 66/211 (31%), Gaps = 21/211 (9%) Query: 9 AFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVV 68 +A E P + V + + G ++ P + Sbjct: 380 CGFAQIEKSQHPGERERQVA-------------EKKREKGERLFHPSMGGGEAAPAQHTA 426 Query: 69 CFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVL 128 S S+R + + + A+ + + T IR + Sbjct: 427 SRSPTDGP--QESHRHRENDADEGEKSRDEEQESAYLPCPCLLSLAIATHLASAIRRYIG 484 Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG 188 LT GI+ K+LAKLA K ++ L + +R ++ L + + G+G Sbjct: 485 THMGLTSTAGISTNKSLAKLAGAFNKPSRQ------TLLLPQHRRGFLAPLALQKIPGVG 538 Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 + + L G++T DL + + Sbjct: 539 SALVRLLSRAGLRTCADLLAVSLPRLAAILE 569 Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 30/125 (24%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P + GKPV V ++ N A+ ++ Sbjct: 205 VIIHVDMDCFYAQVEELLDPSIVGKPVAV--RQKQLIVTSNLVARQK-------PWQA-- 253 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 S+ V+ + V+ +D+ F D T + + Sbjct: 254 -------------------ASHAVVKAMVGEELLVQRLGLDDFFIDATALVAAGGPAEGV 294 Query: 121 REIRA 125 Sbjct: 295 EAFSE 299 >UniRef50_A1VWD4 DNA-directed DNA polymerase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VWD4_POLNA Length = 180 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 55/200 (27%), Positives = 84/200 (42%), Gaps = 46/200 (23%) Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 + SRSFG +T + ++ + +R A++L +H + Sbjct: 1 MVSRSFGRWVTQAVDLATSVAEFTSRVADELCCQHSAAGALMV----------------- 43 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL------- 360 L+ P+ D+ ++ AA L I+Q G Y KAGVML + Q + Q L Sbjct: 44 ----LIRPSSDTAVVVKAALVGLRLIYQFGFLYAKAGVMLVELRPQALRQDELDISAGFM 99 Query: 361 ---------------FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ---QQWQM 402 + P +LM +D LN + GRGTL FA G++ Q W M Sbjct: 100 PISQMAGAGRLEEELVAQSPPLRDRAKLMAKLDALNGRYGRGTLRFAAAGLENDQQAWAM 159 Query: 403 KRAMLSPRYTTRSSDLLRVK 422 K+ SP YTT +D+L V+ Sbjct: 160 KQVRRSPGYTTCWADMLIVR 179 >UniRef50_A1S6R3 Putative uncharacterized protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6R3_SHEAM Length = 763 Score = 79.0 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 82/304 (26%), Gaps = 38/304 (12%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+++ V+ +A + GV G L V F + L+ S+ + Sbjct: 27 PLILYDVAKARVLKACPQAASAGVMAGQSMGSAAQLCPE--VQPFPFDLSLHRQGSDWLC 84 Query: 86 STLEELSPRVEIYSI---------DEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVG 136 S R+ D + + + A L+ + + Sbjct: 85 RHGYSFSARLVPPPEPDTLFARCHDVLLLETGSMAKLFGGEAALAKALAAALEGLNCSFA 144 Query: 137 VGIAQTKTLAKLANHA-----AKKWQRQTGGVVDLSN--------------------LER 171 + A T A + A +K Q L + E Sbjct: 145 MAFAATPLAAGVLAKAQPCLVSKTLQPMFAKAATLQSALKVSASKSASKAIAEPKSAAED 204 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + +SALP+ + + + +L+ MG++ + L + F + L G Sbjct: 205 LSRQLSALPISTLP-VPEALLSRLEGMGLEHIGALQALPAAELGIRFGPEFVLLLARLNG 263 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + P + E ++ + A A LR + Sbjct: 264 NQPHPQSFYCPQE-EYCQRIELMYEAESLNALVFVLGRMFAELALFLRQRQLAVSMLELV 322 Query: 292 IKTS 295 + Sbjct: 323 LHYR 326 >UniRef50_B5J847 Putative uncharacterized protein n=2 Tax=Octadecabacter antarcticus 307 RepID=B5J847_9RHOB Length = 150 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 6/130 (4%) Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + QA+ ++A RAAEKLR ++ F T+ L+ P Y S S ++ T + D+ D+ Sbjct: 16 LFQAVTAHATRAAEKLRQHGLVAGTLTVFFHTNRHRLDRPQYSGSRSTRITTMSSDTFDL 75 Query: 323 INAATRSLDAIWQAG----HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 + AA R A W G + + KAG+ML D L LFD +P S LM+ +D Sbjct: 76 VEAARRGAQAAWPKGQGQTYGFTKAGIMLADLIRFEDRPLTLFDV--EKPKSAALMSALD 133 Query: 379 TLNAKEGRGT 388 +N + G+ Sbjct: 134 RVNKRFGKKR 143 >UniRef50_B7AU37 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AU37_9BACE Length = 105 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D N FYAS E + P+L GKPV V + G V+ + AK GVK G ++ Sbjct: 5 ILHSDCNCFYASVELLHHPELRGKPVAVGGDPEARHGIVLTADYTAKRYGVKTGMALWQA 64 Query: 59 KD 60 K+ Sbjct: 65 KE 66 >UniRef50_A3EWL6 Polymerase ATREV1-444 n=1 Tax=Arabidopsis thaliana RepID=A3EWL6_ARATH Length = 444 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 3/127 (2%) Query: 138 GIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA 197 G K++A A + ++ + + + + LPV + G+G + +KL Sbjct: 300 GKNGGKSIATAAGSSTRRHSTLEDPNFVENYF-KVEEFLDQLPVGTLPGVGSVLKEKLVK 358 Query: 198 MGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 I+T L ++K F E RG + + I ++G R Sbjct: 359 QNIQTCGQLRLISKDSLQKDFGVKTGEMLWSYSRGLDLRSVTAVQ-ESKSIGAEVNWGVR 417 Query: 257 ITDYPSM 263 D + Sbjct: 418 FRDQQDV 424 >UniRef50_C1AAH6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAH6_GEMAT Length = 596 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 42/342 (12%), Positives = 89/342 (26%), Gaps = 57/342 (16%) Query: 43 EAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIY--SI 100 A LG++ G + + + + + D +TL SP+V + Sbjct: 2 AAGRLGIRAGMRISEARAHC--ATLDVRLWDNQAITDAVLAGTATLLTASPQVTPVIGTP 59 Query: 101 DEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA-------- 152 + TG D + + Q+ H V IA + A+ A A Sbjct: 60 GMWWIGATGFDAL-GGEDLFAHLLLQIAQQWHPQARVAIADSCVAARAATWAPIVRSTTP 118 Query: 153 ---AKKWQRQTGG---------------------------------------VVDLSNLE 170 A+ + + Sbjct: 119 TSSAQPSHTRQQRRTPGWETTPATLRSATQLMIGATSTDDMTRMSITSDASPYITCIPSG 178 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 R ++ P+ V + + L A+G++TV LA + + + + R + Sbjct: 179 RCAHYLAPAPLGLVPM-ASELREALQALGLRTVGALAALEASDVEERWGHEGLGAWRLAQ 237 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G+ + + + + + + R + + + +S Sbjct: 238 GDDPRRPG-LTRVDMSRSATVELPNAVHSAEPVLFVVRAQLQRLVQDCVRDGRAAAAVSI 296 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 + S +TPT+ R+ S Sbjct: 297 TLVLDAGRQYPIEDIGSEWADDMTPTRSVREHPPETQESWPE 338 >UniRef50_C6MGZ1 DNA-directed DNA polymerase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MGZ1_9PROT Length = 76 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 ML + Q +LF + QLM +D +N + G+GT+ A QGIQQ+W M+R Sbjct: 1 MLSGLVDEQTRQADLFGLSPISNK-TQLMETIDNINDRMGKGTIRLASQGIQQRWLMRRE 59 Query: 406 MLSPRYTTRSSDLLRV 421 S +TT +LL V Sbjct: 60 KKSQNFTTEWEELLTV 75 >UniRef50_C6NX90 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX90_9GAMM Length = 471 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 53/405 (13%), Positives = 111/405 (27%), Gaps = 39/405 (9%) Query: 7 VNAFYASCETVFRPDL---------WGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFK 57 + ++Y + + P+L G VVL++ + R A G+ G K Sbjct: 3 MASYYVAV---YFPELDAGLWEQDEQGMAPVVLADGRHRLQQRGPMAIHCGLAPGMSLAK 59 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL---TGVRNCR 114 + L + + + L P+V I + + R Sbjct: 60 ARALCPALRL--RPERPQRRLEFLRDWAHWLYGWGPQVAILEPWSTALGVEVGSNPRWRA 117 Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 F +RA G A T T A L A G + ++ + Sbjct: 118 GRQAFLEALRAR--AEGGPRWRWGAAPTATGAVLLALGAA------DGAGWTVSRQQWAQ 169 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 + LP+ + R ++G+ T+ DLA D + F ++ + G Sbjct: 170 VWPRLPLSALPAETRVQELW-YSLGLGTLGDLAALDDAARAQRFGPYWGEFLQIVAGLRP 228 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + D+P++R + + L R ++ Sbjct: 229 DP-RPYFAFPEVPRRELELVQPAGDWPALRFPLARLFRELQKMLTRAGLGARRWQLRLQG 287 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + R++ + + + D Sbjct: 288 REGRFEDCLESREIL--------SDRELFLELWQGRLQRRPWTFAAETIVLEALDTCPWQ 339 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 Q + + + E+L ++ A+ G +Y + Sbjct: 340 GQQRDFWRE-DLAERQERL---LEQWQARLGPEAVYILSPWPDHR 380 >UniRef50_A8UAE9 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UAE9_9LACT Length = 149 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 52/130 (40%), Gaps = 3/130 (2%) Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 KLA A K + G+ + + + P++++WGIG+R + + +GI +V L Sbjct: 3 KLALDNAAK--KTPNGIAECHYEMVSETIWNIHPINEMWGIGQRTAANIYRLGIDSVYSL 60 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQL-EEFAPTKQEIICSRSFGERITDYPSMRQ 265 + + +++ ++ E+ G + + + P S+ D + Sbjct: 61 STNSAQSLKRTHRIIGEQLFYYAHGIDQSIIAQNYIPLSNSFSKSQILDRDYIDQYEIEV 120 Query: 266 AICSYAARAA 275 I A + A Sbjct: 121 VIREMADQVA 130 >UniRef50_Q4QCF3 DNA polymerase eta, putative n=3 Tax=Leishmania RepID=Q4QCF3_LEIMA Length = 786 Score = 76.7 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 43/140 (30%), Gaps = 26/140 (18%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKM-GDPWFKQK 59 A D++ FYA E V D P ++ G IA N A+A GV+ + + Sbjct: 36 IAHMDMDCFYAQVEAVRLGVDCRVTPFALV--QWGSFIAVNYPARARGVRRFCLSPDEVR 93 Query: 60 DLFRR---------------------CGVVCFSSNYELYADMSNRVMSTLEELSPRVE-I 97 + + E Y S ++ + L V Sbjct: 94 RELPDVRMSHIATYAMGESEYCYPEAPHINTHKVSLEPYRHASRQIFAILRAEPGVVVGK 153 Query: 98 YSIDEAFCDLTGVRNCRDLT 117 IDEA+ D+T Sbjct: 154 AGIDEAYVDVTEAARRELAE 173 Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 77/276 (27%), Gaps = 62/276 (22%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + +R + H GIA + LAK + K Q+ L +R Sbjct: 260 ASRVVHRLRQRIYAELHYDCSAGIAHNRVLAKCISATHKPNQQ------TLLLPDRSASA 313 Query: 176 MSALPVDDVWGIGRRISKKLDAM--GIKTVLDLADTDIRFIRKHF--------------- 218 + LP+ + G G ++ + A+ G+ + + +RK Sbjct: 314 LFELPLSGLRGFGGKLGAAVSAVCGGVTECREAWLVPLAQLRKLDGTCDAGDGEDAEGDR 373 Query: 219 ------------------------------NVVLERTVRELRGEPCLQLEEFAPTKQEII 248 + LRG + + A + + Sbjct: 374 EGHVDEASAACRGDTKVDNGGGGEDGMVAQSRTGVYAFYRLRGLGSDTVADPALP-RGMK 432 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRS----EHQYCRFISTFIKTSPFALNEPYY 304 S+ F + + + + + A +L H+ R + ++ Sbjct: 433 ASKIFHPACSSWSAAQLWMAPLAGELWHRLSEYESCYHKEGRSLVLVLRAYVTPEQARRG 492 Query: 305 GNSA----SVKLLTPTQDSRDIINAATRSLDAIWQA 336 ++ V L T +D+ +I R + + Sbjct: 493 QHTRSYRAQVPLPTNVRDASEIAGMGLREFVKLMRE 528 >UniRef50_C2QVF5 DNA-damage repair protein n=1 Tax=Bacillus cereus ATCC 4342 RepID=C2QVF5_BACCE Length = 198 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 10/140 (7%) Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEA--FCDLTGVRNCRDLT---DFGREIRAT 126 Y SN + + P +E + + F + + + F + + Sbjct: 3 PIMGTYIKCSNYITKLALQYVP-IEDFINTASMNFLWILPIASIYLPEIQMKFALQFKRE 61 Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHA-AKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + + T + +GIA ++K+A AKK + GV + + KL S P+ W Sbjct: 62 IYEHTRIECTIGIAPNLLMSKVALDIEAKKNKD---GVAYWTYEDIPTKLWSIRPLSKFW 118 Query: 186 GIGRRISKKLDAMGIKTVLD 205 GI +I KL+ G+ ++ + Sbjct: 119 GISHKIETKLNQKGVHSIGE 138 Score = 50.9 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 23/54 (42%) Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 G Q++LFD+ R +LM VMD + K G+ ++ R L Sbjct: 139 GEEQISLFDNIIQREKEIKLMKVMDEIRTKFGKNSILRGISYTNNATARYRNTL 192 >UniRef50_Q21LY8 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21LY8_SACD2 Length = 541 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 52/416 (12%), Positives = 108/416 (25%), Gaps = 38/416 (9%) Query: 14 CETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 C +P ++ V A LG+ P + L + S Sbjct: 31 CRQNEQPIHSHCNQAIVVVEKFRVTHLTQGAAKLGITTNMPIATAQAL---GNITQLEST 87 Query: 74 YELYADMSNRVMSTLEELSPRVE---IYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 + N + +P +E +++ D D L R Sbjct: 88 PQKQQQAINILQDICYRFTPYIETQHSNGHTGLLLEISRCLLLFDGVDSLYNQLTQALNR 147 Query: 131 THLTVGVGIAQTKTLAK--------LANHAAKK----WQRQTGGVVDLSNLERQRK-LMS 177 T + TK A A+++ K ++ ER R + Sbjct: 148 TPFEYKLAFGHTKHAAWLQTFAQSQQADYSQKILDTLNTLYNSKHSTVNTAERCRAFFIE 207 Query: 178 ALPVDDVWGI--GRRISKKLDAMGIKTVLDLADT----DIRFIRKHFNVVLERTVRELRG 231 L + + + + + LD G +T+ D+ + + + K + EL Sbjct: 208 QLNRNAIHLLHDHPKAIESLDKTGFQTLKDIYNHIETNGLASLSKRLGTDFTEYLAELYD 267 Query: 232 EPC--------LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 ++ F I + +RQ + + + + LR+ Q Sbjct: 268 IDQGTKQTSLFKPPARTYQPQEIFCQHIQFDYPIANSEQLRQPMQTLLQQLDDFLRNRQQ 327 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 + + + + + L + ++ + L+ A Sbjct: 328 QIQRLYWHLFDIYQNKDTLVVNGNG---LSGQHHTWQQLLELSIIQLENKSLA-FEVDIL 383 Query: 344 GVMLGDFFSQGVAQLNL-FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + L FD GS + L ++ G +Y Sbjct: 384 ELECQHLQQAQHTSQALAFDGKHNNQGSNAFELTLARLQSRLGEHAIYKVSAHDSH 439 >UniRef50_Q4UFQ5 Putative uncharacterized protein n=2 Tax=Theileria RepID=Q4UFQ5_THEAN Length = 667 Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 32/267 (11%), Positives = 87/267 (32%), Gaps = 44/267 (16%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P V ++ +++ N E G+K G D+ + + +++ + R++ Sbjct: 111 PAAVYNHGR--ILSVNNECLNRGIKKGMYVETSLDICKDMKL--VKYDWDKVNERGLRII 166 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVL--------QRTHLTVGV 137 L++ + R+ +E + ++ L + + V + Sbjct: 167 RLLKKYTDRILSPQYNEFYLQISYTECRNLLETVCSNTDENICNLAIQISREVPGDPV-I 225 Query: 138 GIAQTKTLAKLANHAA---KKWQRQTGGVVDLSNLERQR--------------------K 174 GI + ++KLA+ K +++ DLS + + Sbjct: 226 GIGKNMLVSKLASKRCRNLKINSQESEYDYDLSPVLCITSIYGGCYMVSDKICIVTDGFR 285 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF-IRKHF-NVVLERTVRELRGE 232 ++ + + ++ G+G +S+ L + G+ T D+ ++ + + G Sbjct: 286 FLNNVYLSEIPGVGY-LSQVLKSKGLVTCNDVRKIGTPLCLQSVLGGRIGKLVYNFCFGY 344 Query: 233 PCLQLEEFAPTK-----QEIICSRSFG 254 + + + + G Sbjct: 345 DYRCANLPKKQQDFFLNKSFMSCVTIG 371 >UniRef50_A1WWK8 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WWK8_HALHL Length = 175 Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 44/93 (47%), Positives = 62/93 (66%) Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 + VWG+G+R++ +L +GI+T DLA R IR+HF V L RT ELRG C LE Sbjct: 24 NAVWGVGQRLADRLAELGIQTTEDLARLPPRRIRQHFPVTLARTAEELRGCACHDLESEP 83 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 +Q+I+CSR+FG + D P++R+A+ YAARA Sbjct: 84 APRQQIVCSRTFGTPVRDKPALREAVADYAARA 116 >UniRef50_B8C8E2 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C8E2_THAPS Length = 1538 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 80/258 (31%), Gaps = 13/258 (5%) Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +R V Q+ T+ GI+ +K +AKL K + + K+M Sbjct: 333 ANVRRVVFQKLGFTLSAGISTSKLVAKLGATYGKPNGQA------VIYPVAIPKVMDETQ 386 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDL--ADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + +G ++ KK+ +M I D+ + D + RG +++ Sbjct: 387 IRKARMLGGKLGKKVGSMNID-ADDVIRSYIDKSISFAVGDESGRWVFDACRGICLEEVK 445 Query: 239 EFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + I +S YP + + + A+ ++++ + + Sbjct: 446 PTLNVLPKSITAFKSLRGSAGSYPELDKWVALLASDIMKRVQLDTSRNHRVPKSCTLGYA 505 Query: 298 ALNEPYYGNSASVKLLTPTQ-DSRDIINAATRSLDAIWQA--GHRYQKAGVMLGDFFSQG 354 + S +L PT D + + + + + G DF ++ Sbjct: 506 TKEDGNNWIGKSHRLTFPTDKDFDTRVQKLVDNARRVLLDSGHDSFSRIGFSAIDFVTRA 565 Query: 355 VAQLNLFDDNAPRPGSEQ 372 + F S Sbjct: 566 TKGIYSFFSVGKIESSSA 583 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + L D++ FYA CE V P+V++ +A N A+ G+K GD + + Sbjct: 19 VILLLDMDCFYAQCEVVRLGLERDIPLVLV--QWNSALAVNYPARKFGIKRGDSFQVAIE 76 Query: 61 LFRRCGVVCF 70 R V Sbjct: 77 KSRGKCVAIH 86 >UniRef50_Q384F9 Putative uncharacterized protein n=3 Tax=Trypanosoma brucei RepID=Q384F9_9TRYP Length = 581 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 86/298 (28%), Gaps = 30/298 (10%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQ 141 + E++P +E + G D + + + G++ Sbjct: 213 RWPLELSLEITPIIEHQRKQ--MLECQGECRVSTAEDVMELLSSVFSAELRVGAWCGLSC 270 Query: 142 TKTLAKLANHAAKKWQ------RQTGGVV-----DLSNLERQRKLMSALPVDDVWGIGRR 190 T LAK+A + GGVV D+ + + ++ + L + D+ +G+ Sbjct: 271 TPVLAKMACDECHRKHKLCRQDYSRGGVVGTVRYDIRSHKEAKEFVQNLSLGDIPVVGKP 330 Query: 191 ISKKLDA-MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG------EPCLQLEEFAPT 243 ++ L+ GI +AD ++R +E + G E L P Sbjct: 331 QARLLEDVYGITKCGGIADQEVRLGFSLSQSTMEFFLSVAYGTVRLPSEATTTLLRKPPR 390 Query: 244 KQE--IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 + I FG ++D + S L + + L Sbjct: 391 CKAAHIRRESQFGRVVSD-EQFINTVMSVFDNVYTDLVEHDFVTGRVMIETRR---TLPR 446 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG----HRYQKAGVMLGDFFSQGV 355 ++ S + T D + R GV GD S Sbjct: 447 THWVVEESEDIAPRTNDRDLLREVTIRLARRFAPRRTEELRDIYSVGVHFGDVRSWSE 504 >UniRef50_A7HCF7 Putative uncharacterized protein n=2 Tax=Anaeromyxobacter RepID=A7HCF7_ANADF Length = 555 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 60/402 (14%), Positives = 104/402 (25%), Gaps = 50/402 (12%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+ V+S+ ++ +A A A GV+ G R V + V Sbjct: 36 PLAVVSDGK--IVHCDAAAAADGVRPGATVSAALAACGRLRTVAL--DPAAERAALRAVA 91 Query: 86 STL-------EELSPRVEIYSIDEAFC-----------------------DLTGVRNCRD 115 + E ++P V + A +TG RD Sbjct: 92 EAVLLLAPAVEPVTPDVVLLDASSAHLLAGAVQGARAEATAAGGTAPSAPVITGTMAARD 151 Query: 116 -----LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + IA + A + Sbjct: 152 RALVAGERVLAQRAIAAAAEMGYVAQAAIATGRAAAGALARHGAFPAHDGVTARIVQVPR 211 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 ++ A + G+ ++ +L +G+ LA + F R R Sbjct: 212 QETGRALAALPLEALGLAPAVAARLRGLGVADAGALARLPAGTLAHRFGPDGVAAARLAR 271 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 GE L +AP + + + A+ A R A +L + Sbjct: 272 GEDDTPLSPYAPETLPV-EALELDAPAESAEPLLFAVKRLADRVAARLAGRGLGATRLKI 330 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 +K P V L PT + + A + A+ G + + Sbjct: 331 VLKLDPRGEERVI------VPLAQPTAAAARWLVPAKEHVFALRLPG-AVTSVQLAAIEV 383 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 QL + L V+ L + G G L+ A Sbjct: 384 APLAAEQL---AIDDRPEALAALENVLARLTGRLGDGALFAA 422 >UniRef50_A6SZA5 Uncharacterized conserved protein n=3 Tax=Oxalobacteraceae RepID=A6SZA5_JANMA Length = 504 Score = 74.8 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 48/413 (11%), Positives = 111/413 (26%), Gaps = 45/413 (10%) Query: 13 SCETVFRPDL-WGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 SCE PD P+V+ N A+ G++ G + L G+ Sbjct: 25 SCE----PDPFADAPIVIC--ERQVAGWCNQLAEDAGIRAGMSEASARALA--AGLQTLQ 76 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 + +P V + D ++ L Sbjct: 77 RDTGQETKALQEAALWCLHFTPHV-VLKPDGLLLEVGASLRLFGGHQRIATQLLGGLLEL 135 Query: 132 HLTVGVGI----------AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 L + AQ+ ++K+ H + + + + + + Sbjct: 136 GLQARLASAATAGAAWLRAQSDGISKVFAHDGDINEALDPLPLHVL--DSAQAHL----- 188 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 LD +G + + +L + + F L + G F Sbjct: 189 -----------DTLDGIGCRRLGELRQLPRAGVARRFGQALLSELDRAYGTEAEAHLWFE 237 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 R+ + ++ A + L + H I+ + + Sbjct: 238 APVI-FDVKLELPARVENTEALLFAARRLLLQLTGWLSARHAAVAGITLCLHHES-SRQR 295 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 + + ++ L P++D + L + + + +Q LF Sbjct: 296 DHRRTNVNIMLGMPSRDIDHLALLLRERLAQLELI-APVIEISLKAEQITAQAAPNTELF 354 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 + E +++ L ++ G + + +++++S TR Sbjct: 355 PTPSSDA--ENTGRLVERLQSRLGHEAVRQLSVFADHR--PEKSVMSSVLNTR 403 >UniRef50_A5LXS6 DNA-damage inducible protein P n=2 Tax=Streptococcus RepID=A5LXS6_STRPN Length = 145 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 18/129 (13%), Positives = 48/129 (37%), Gaps = 7/129 (5%) Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 R+ RG ++ ++ I +++G+ + +++ + + + A L + Sbjct: 24 GYDLYRKARGIHNSPVKS-NRIRKSIGKEKTYGKILRAEEDIKKELTLLSEKVALNLHQQ 82 Query: 282 HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQ 341 + + + I+ F+ + L TQD+ I A + + + + + Sbjct: 83 EKAGKIVILKIRYEDFS------TLTKRKSLAQKTQDASQISQIALQLYEELSEKERGVR 136 Query: 342 KAGVMLGDF 350 G+ L F Sbjct: 137 LLGITLTGF 145 >UniRef50_Q6MQS5 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQS5_BDEBA Length = 420 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 36/320 (11%), Positives = 98/320 (30%), Gaps = 24/320 (7%) Query: 91 LSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLAN 150 LSPRV+ F D+ ++ E + + IA T A++ Sbjct: 3 LSPRVQYRFPHYIFVDIGSTQHLMGGEIGCLEKALQIAAKFAPDASAAIADTPAGAQMLA 62 Query: 151 HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR--------ISKKLDAMGIKT 202 G + K + + D+ G+ + +G+ Sbjct: 63 KWRPSHISLRG------KEQESFKGLGLDALKDLEGLSPWAQKKPVEHMIAFFHTLGVYG 116 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 + + + + +R+ + L + + P + + + P Sbjct: 117 LEGVLNFRLNSLRERWGDFGVLLWNRLHSQDSQVISPLVPRDPLVGYGY-LDDPLGSAPL 175 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + + + +L+ ++ + + + + S++ ++PT+D Sbjct: 176 LMNRLKVHLDILFARLQGLARHAQRLDVVLH-----CEYSDKRYNLSIEPVSPTRDQELF 230 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP-GSEQLMTVMDTLN 381 + + L+ ++ + L D + + QL+ F+ +L++ Sbjct: 231 EDLLFKKLEQQVLEN-PIREFEITLFD-VPEKIQQLDFFEPRDNTEDRWRRLISFAKQSQ 288 Query: 382 AKEGRGTLYFAGQGIQQQWQ 401 + G + A +Q ++ Sbjct: 289 CEMGFLQME-ASHFPEQSFR 307 >UniRef50_C7I5M5 Putative uncharacterized protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I5M5_THIIN Length = 458 Score = 72.5 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 30/237 (12%), Positives = 72/237 (30%), Gaps = 11/237 (4%) Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + LP+ + + ++ L +G +T+ +L + + F L + + G Sbjct: 112 LAERLDPLPLTVLT-VTAPLADTLAQLGCRTLGELRALPRGGLTRRFGPALVEALDQAYG 170 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + + Q R+ + ++ A + L + + + Sbjct: 171 L-RSPVFSWVTLPQTFCARLDLMARVENAMALVFAAKRLLLQLQGWLVARNAGVTAFTLR 229 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + G++ ++ P +D + L + A + + + Sbjct: 230 WQHDGLRHQPGEEGDALVIRTAQPMRDMAHLSRLLAEQLARVQLA-APVETLILEVDSVC 288 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF------AGQGIQQQWQM 402 +L D A + L V++ L A+ G + A QQW Sbjct: 289 DYRPPTASLLPDAA--EDRDTLNRVLERLAARLGAQRVVRPVLREDARPEWAQQWVP 343 >UniRef50_A3WZ00 DNA polymerase IV n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZ00_9BRAD Length = 155 Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 12/160 (7%) Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 + + +F I D+ ++ + + + R + +L++ I+ +KT+ F Sbjct: 8 KTVSSETTFESDIRDFATLERLLWRLSERVSSRLKASELAGSTITLKLKTADFR------ 61 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 + S + TQ + I L G ++ G+ + S A + + Sbjct: 62 QRTRSQSISISTQLASKIFATCREILAREID-GTAFRLMGIGVSALRSGSQAD----EAD 116 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 S MD L K G + + ++ Sbjct: 117 MLDFRSAHAERAMDDLRKKFGSVAVIRGIAY-DGPEKPRQ 155 >UniRef50_B9L412 Putative uncharacterized protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L412_THERP Length = 324 Score = 71.7 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 69/204 (33%), Gaps = 13/204 (6%) Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEII 248 R+ +L A+GI T+ AD ++ +R+ F + R G+ + Sbjct: 23 SRVQDRLRALGIVTIGQFADLPLQSLRRRFGADIVLAHRLAHGDDPTPFR-GWTPLVPLR 81 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 R+ I + ++ + S A+ L + R I + + E + Sbjct: 82 AERALEPPIATHDALEPVLRSLCREIADGLAALAHAARSIQLEL------VEEADRTVAR 135 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR- 367 +L P + + ++ A L + H + + + +Q LFD+ R Sbjct: 136 FRRLPQPLRTTPELFAVAWSLLAGMTV-VHPIVLLRLTVEEHAPVHASQPALFDETPART 194 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYF 391 E+L + RG + Sbjct: 195 AERERLWQA----AQRFARGRVVR 214 >UniRef50_Q8I347 Putative uncharacterized protein n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8I347_PLAF7 Length = 1697 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 23/173 (13%), Positives = 57/173 (32%), Gaps = 15/173 (8%) Query: 1 MFALCDVNAFYASCETV-------FRPDLWGKPVVVLSNNDG-----CVIARNAEAKALG 48 ++ D + ++ + + + + V + + + N K Sbjct: 666 VYLYIDFDNYFLNASIRNKICMYEKKKSMNNEIFCVCHSLKKEDSYGIISSTNYWGKKNK 725 Query: 49 VKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT 108 + G + + + ++ S + L S V + S+DE+ L Sbjct: 726 ILKGMVKGEATKM--NKNINFVKYDFSNILKCSYLFLLVLINYSKNVRVLSVDESILQL- 782 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 D+ ++I + + T+L+V +GI+ + ++ A KK Sbjct: 783 FYEKEEDIFIISKKISDDIYRLTNLSVSIGISHDLSTSRKALKFCKKRFMFFD 835 >UniRef50_Q1NNX6 Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNX6_9DELT Length = 139 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 36/52 (69%), Positives = 43/52 (82%) Query: 4 LCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPW 55 L D N+FY SCE +F P L G+PVVVLSNNDG VIAR+ EAKALG+KMG+P+ Sbjct: 23 LLDCNSFYVSCERLFDPGLEGQPVVVLSNNDGGVIARSNEAKALGLKMGEPF 74 >UniRef50_B5JUJ6 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUJ6_9GAMM Length = 312 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 25/206 (12%), Positives = 61/206 (29%), Gaps = 10/206 (4%) Query: 92 SPRVEIYSIDEAFCDLTGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLAN 150 EI E DL+ + ++ + + G+A A A Sbjct: 49 FENYEILGNGEVLFDLSRQQREFCSPVQMAEQLTMQLQGYLGGELSTGLAADALTAIYAA 108 Query: 151 HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTD 210 + + L ++++S P++ + + +S L +G ++V L Sbjct: 109 RQS-------SSGLSLVPAWDAQRVLSGAPIECLDSVLSGVSTLLKGLGYQSVGQLGQQR 161 Query: 211 IRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 + + + + RG+ Q + + R D I + Sbjct: 162 DQVLTYRYGELGRAIQLLARGQSVPQQYWYKSPPLSVSVKGRLSRR--DGEQASHRINAL 219 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSP 296 + +++ + + F + S Sbjct: 220 KEKVSQRYARLGFSAKRWTLFFRRST 245 >UniRef50_Q6F8Z6 Fragment of component of DNA polymerase V (UmuC) (Part 1) pseudogene n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F8Z6_ACIAD Length = 115 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 2/114 (1%) Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPG 369 + L T + +I A L I+++GH Y+KA + L D + +LF ++ R Sbjct: 1 MHLKDYTDNLLEINQAVQSGLKIIFKSGHIYKKARITLLDIIPKHHYAPDLFVNSDQRVK 60 Query: 370 SEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ--WQMKRAMLSPRYTTRSSDLLRV 421 +++L+ + +N G+ + A Q W+M + SP Y +S LLRV Sbjct: 61 NQKLLDTLIKINTNHGKNRIVLASLIHHQPRCWEMNQLYKSPSYLMQSKALLRV 114 >UniRef50_A1VWD1 Putative uncharacterized protein n=5 Tax=Burkholderiales RepID=A1VWD1_POLNA Length = 443 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 36/313 (11%), Positives = 77/313 (24%), Gaps = 17/313 (5%) Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 + +PRV + + E + G+A T Sbjct: 28 WALQFTPRVARLE-EAVVLEAAQSIRLFGGELPLHEQVEQGARAL------GVAFTAWAP 80 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 A G +L+ LP + + + L +G +T+ D+ Sbjct: 81 TSLAALALARAGVADGFARPLT-----QLLDPLPFAVLSAVN-VHAATLARLGCRTLADV 134 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 I + F+ L + + G + A R+ + Sbjct: 135 RRLPRGGIGRRFDAALLAALDQAYGLRPEVYDWVALPV-TFAARLELPGRVETTAGLLFG 193 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + L + H + + G ++ PTQ + Sbjct: 194 ARRLLLQLGGWLAARHAGVTAFTFRWRHDTLRAQSAGEGCELLIRTAEPTQSVERLGRLL 253 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 L + + ++ +L D A E L ++ + A+ G+ Sbjct: 254 AEHLAHVQLLAPA-LELELLATGVSPMAENNHSLLFDAA--RQGESLGQALERVEARLGK 310 Query: 387 GTLYFAGQGIQQQ 399 + + Sbjct: 311 RRVLRPRLVADHR 323 >UniRef50_A7VEX4 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VEX4_9CLOT Length = 127 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 1/95 (1%) Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-FSQGVAQLNLFD 362 Y + +K+ T + +I A R + + GV D + Q++LFD Sbjct: 12 YSFTRQMKIDHATNITSEITEYAYRLFKENYNWSKTIRSIGVRGADLVTDKYWEQIDLFD 71 Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 D + R + +D + + G ++ + Sbjct: 72 DISRREKMMKADAAVDDIRRRFGYYSVQRGLMYMD 106 >UniRef50_Q2Y7D7 DNA polymerase V n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y7D7_NITMU Length = 79 Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 36/76 (47%) Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 ML + Q +L ++ S++LM MD LN + GR T+ + W M R Sbjct: 1 MLMGINDAQIIQESLLHEHGAGERSQRLMKAMDALNLRYGRNTVSVFTPASPKSWAMGRE 60 Query: 406 MLSPRYTTRSSDLLRV 421 +SP YTTR SD+ Sbjct: 61 AMSPCYTTRWSDVPVA 76 >UniRef50_C7M0M6 Putative DNA-directed DNA polymerase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0M6_ACIFD Length = 517 Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 65/375 (17%), Positives = 116/375 (30%), Gaps = 31/375 (8%) Query: 44 AKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV-EIYSIDE 102 A+A G+ +G + VV + A RV L +SP V ++ + Sbjct: 56 ARAAGIPLGARAPMVRARLGDGRVVAV--DPIAEARWLARVHRALWSVSPGVGQVAGVRG 113 Query: 103 AF-CDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 AF + R E L T + V + + A +A A G Sbjct: 114 AFAIEARAARRFYGTEYALVERVRAALDGT-VPTRVALGASIAGALIATVAGA---TTDG 169 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV 221 G ++ + R +A PV+ + R ++ L +G++ V D + F Sbjct: 170 GGAEVGS----RAWFAAQPVELLP---RWLAGPLRDVGVRRVGGFQRIDTAAVAARFGDR 222 Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 R R +R E L L P + + + + + L Sbjct: 223 GLRWHRLVRLEADLPLVRTPPLEP-----DAVAIDVEEGEDAQSVRFRLRGALDLVLAEH 277 Query: 282 HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQ 341 + F E V+ + +I+ + D A R Sbjct: 278 ADVAP-----ARWRSFVDLEGAVALERVVERPVG-GTAAEILESVRALSDRAEGARGRPV 331 Query: 342 KAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI-QQQW 400 + GV + + QL+L D P + + L + G + AG G + + Sbjct: 332 RVGVEILAWSVPQPPQLSL--DGVPGARRQAVRQAFHVLQQRYGPEAVRVAGPGPVGRGF 389 Query: 401 QMKRAMLSPRYTTRS 415 +R +S +T Sbjct: 390 ADRRPWVS--WTGVW 402 >UniRef50_C5CQX8 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CQX8_VARPS Length = 449 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 36/329 (10%), Positives = 83/329 (25%), Gaps = 22/329 (6%) Query: 82 NRVMSTLEELSPRVEIYSIDEA-FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 + +P V DEA +++ A + Sbjct: 24 EALGWWALRYTPHV--AWQDEALMLEVSACERLWGGRSSLMRQLAHENPAPGAVMRGAQG 81 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 T +A ++ + + + L+ L + L +G Sbjct: 82 ATSPIALARLRLFERNENRPKDIPAGLPLDTLTAAHPHLDL-------------LARLGC 128 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 +T ++A + + F L + + G + Sbjct: 129 RTWGEVAALPRGGLTRRFGAELRKALDTAWGLSPESHDWLTLPDV-FEQKLELPALAETA 187 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS--PFALNEPYYGNSASVKLLTPTQD 318 P + + A LR+ + R + F +V+ PTQD Sbjct: 188 PELMWSANRLLAALQIWLRARQRGARALELQWTLDLKRFNGVNLPPHQQVTVRTAEPTQD 247 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 + + L A+ + + A + ++L +++ Sbjct: 248 MAHLRRLLSEKL-ALTTLAAPASWLRLRTLETDPWAGASTSFL--PEDNRKGDKLHEMVE 304 Query: 379 TLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 L+ + G + + + K+A Sbjct: 305 RLSVRLGAHQVVVPAAQADHRPERKQAWR 333 >UniRef50_Q4D5H7 Putative uncharacterized protein n=2 Tax=Trypanosoma cruzi RepID=Q4D5H7_TRYCR Length = 547 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 40/317 (12%), Positives = 94/317 (29%), Gaps = 38/317 (11%) Query: 69 CFSSNYELYADMSNRVMS--TLEELSPR---VEIYSIDEAFCDLTGVRNCRDLTDFGREI 123 +++ D + +++ P VE+ I E L D + Sbjct: 186 ITPEDFQRVKDKLRMLTRFIIVDKRWPLEVSVEVTPIIE-----RAPSENNSLVDVANML 240 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAA------KKWQRQTGGVV-----DLSNLERQ 172 T+ + GI+ T LAK+A A+ + +GG++ DL E Sbjct: 241 SRTLADELRIGAWCGISSTPVLAKMACEASRNQPPLRPAALASGGILSLKHYDLPTHESL 300 Query: 173 RKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 ++ ++ +P+ D+ +G+ + L + GIK D++ + R ++ + G Sbjct: 301 KEFLADVPLSDIPVLGKAQVELLKSVYGIKKCGDISAQEDRMGFSLAPATMDFFLSIAYG 360 Query: 232 --EPCLQLEEFAPTK------QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 ++ K +I +G I + + + L Sbjct: 361 AIRLENEIGITLRQKGTRCKAAQIRRESQYGR-IVSEEQFINTVLTIFDSVHKDLLLHDF 419 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG----HR 339 +S + + ++ ++ T + + R Sbjct: 420 VTGRVSIDTRR---TVPRVFWVTEEYEEITPRTNNREILRETTLRLAKRFAPRRTKEFLD 476 Query: 340 YQKAGVMLGDFFSQGVA 356 + + + Sbjct: 477 VYIVSIHFSEIRTWDEE 493 >UniRef50_Q14N04 Putative dna polymerase iv n-terminal and c-terminal truncated protein n=1 Tax=Spiroplasma citri RepID=Q14N04_SPICI Length = 95 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 7/88 (7%) Query: 100 IDEAFCDLTG-VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR 158 ID+ + D+T +++ V Q+ L +GI+ K+LAK+A+ K Sbjct: 12 IDKCYIDVTDIYLKYGSAMRLALDMQQNVFQQIGLPNSIGISYNKSLAKIASDMKKPMG- 70 Query: 159 QTGGVVDLSNLERQRKLMSALPVDDVWG 186 + L E +L+ LPV+ ++G Sbjct: 71 -----ITLIRPEDVAQLVQPLPVNKIFG 93 >UniRef50_C5T314 UMUC-like DNA-repair protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T314_ACIDE Length = 72 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG---IQQQWQMKRAMLSPRYTT 413 Q L ++ +LM +D LN + G+GT++ G + W MK+ +P+YTT Sbjct: 3 QGELDLEDEDHRDRTRLMVALDALNQRYGKGTVHSGATGGTNRGKDWGMKQERRTPQYTT 62 Query: 414 RSSDLLRVK 422 R D+ + Sbjct: 63 RWEDVPVAR 71 >UniRef50_Q55931 UmuC protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55931_SYNY3 Length = 116 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 41/78 (52%), Positives = 53/78 (67%) Query: 32 NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL 91 + + A KALGVKMG P+FK DL +R + FSSNY LY D+S+R+M++L+ Sbjct: 20 GSHAGIPAVRLRVKALGVKMGVPFFKIPDLVKRHNIQVFSSNYCLYGDLSHRIMTSLQLF 79 Query: 92 SPRVEIYSIDEAFCDLTG 109 SP VEIYSIDEAF +LT Sbjct: 80 SPVVEIYSIDEAFLELTP 97 >UniRef50_UPI0001BC9B94 impB/mucB/samB family protein n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC9B94 Length = 143 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 52/160 (32%) Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 +++A+ +Y ARAAEKLR++ C+ + ++T F +E Y N ++L T D+ Sbjct: 34 IKEAVATYTARAAEKLRAQGSVCKKMRLSVRTGMFNPDEAKYANGVVIELPYATNDT--- 90 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 +LM+VMD++N+ Sbjct: 91 -------------------------------------------------RLMSVMDSINS 101 Query: 383 KEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 + GRGTL A + +R ++S YTTR +L K Sbjct: 102 RWGRGTLRTATVPTTPECAKRRDLMSQSYTTRVDELWIAK 141 >UniRef50_A8J5N9 DNA polymerase eta/iota (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J5N9_CHLRE Length = 384 Score = 68.6 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 22/73 (30%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN----------------------DGCVI 38 + A D++AFYA E P L G+PV V+ N +G +I Sbjct: 29 VVAHIDLDAFYAQVEVGRNPSLRGRPVAVVQYNPWDTEALKTALRPDDPRIFNDSNGSII 88 Query: 39 ARNAEAKALGVKM 51 A + EA+ GVK Sbjct: 89 AVSYEARKFGVKR 101 >UniRef50_C5GUZ9 DNA polymerase iota n=4 Tax=Ajellomyces RepID=C5GUZ9_AJEDR Length = 731 Score = 67.4 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 7/96 (7%) Query: 23 WGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS-NYELYADMS 81 ++L V+ N EA+ G++ + K + VV + + D S Sbjct: 16 RDDSRIILHFQKQIVVTCNYEARRRGLRKLQLIKEAKKVCPD--VVIVPGEDLTKFRDAS 73 Query: 82 NRVMSTLEELSP----RVEIYSIDEAFCDLTGVRNC 113 + S L RVE DE F D+T + + Sbjct: 74 KEIYSFLRGFVSGWGGRVERLGFDEVFLDVTSLVDY 109 Score = 58.6 bits (140), Expect = 5e-07, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 62/238 (26%), Gaps = 76/238 (31%) Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL-- 169 + IR + + T VGI+ +K LAKLA + K + L Sbjct: 192 RLILGSHLASYIRHQLEEHKSYTATVGISTSKLLAKLAGNVHKPRNQT-----TLLPPYN 246 Query: 170 ----------------------------ERQRKLMSALPVDDVWGIGRRISKKLDAM--- 198 + + A + + GIG +I++K+ Sbjct: 247 STNDDDDAYFDHDDGDDDDYDEKHAQQQSNIIRFLDAHDISAIPGIGFKIAQKIRRHVLG 306 Query: 199 -----GIK---------TVLDLADTDIRFIRKHFNVV----------------------- 221 GI TV D+ ++ Sbjct: 307 RELSSGIYEQLSKADYVTVKDVRLHPNMGPLTLNELLLLSSSTSSGSGGGVGSGALPKDI 366 Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKL 278 + L G + +I S+G+ R+ +R + + A ++ Sbjct: 367 GMKIWGLLHGIDPSPVAGARAVPTQISIEDSYGDGRLEGLDVVRGELVALAGSLLRRM 424 >UniRef50_Q01QX1 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01QX1_SOLUE Length = 395 Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 45/296 (15%), Positives = 85/296 (28%), Gaps = 20/296 (6%) Query: 95 VEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 +E S D D+ G+ L A + + LA AN A Sbjct: 1 MEATSADTVTFDVGGLDRLFGLPQDVAAAIARRARECGIK--------ANLALAANADAA 52 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + V L + K + L + + + + L+ GI++ + I Sbjct: 53 ICAARGFSGVSLIPYGDEGKFLGTLSLAVL-APSADLVETLERWGIRSFHQMGALPPLGI 111 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 + R RGE +L + + + Sbjct: 112 AERLGAEGMRLRELARGEAERKLLPIPEPL-TFEDELELEYPVELLEPLAFLLARLINGL 170 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 A +L + + +K L+E +++L P+ D++ + L+A Sbjct: 171 ATRLATRALATDELRLRLKLENRGLHE------RTLRLPVPSLDTKAFLKLLQLDLEAH- 223 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 + + Q LF AP P +L + + A G G + Sbjct: 224 PPAAPIVHLWMGVNPVKPQSAQTG-LFIPVAPEP--VKLELTLARIQAFVGEGRVG 276 >UniRef50_B5J622 Putative uncharacterized protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J622_9RHOB Length = 70 Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 35/56 (62%) Query: 367 RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 +P S LM+ +D N + G+ TL FA +G++Q WQ++ S RYTTR DL V+ Sbjct: 6 KPKSAALMSALDQANDRFGKKTLVFASEGMKQPWQLRSNHRSSRYTTRLVDLPVVR 61 >UniRef50_A9VZM8 DNA-directed DNA polymerase n=4 Tax=Methylobacterium RepID=A9VZM8_METEP Length = 127 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 8/126 (6%) Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ----AGHRYQKAGVMLGDFFSQGVAQL 358 S V L T D+ +I AA S+ W+ RY KAGV+ D +Q Sbjct: 1 MRSISTVVTLPEATNDTLALIPAALHSVTRTWREQGCPPWRYSKAGVVTVDLVPLAASQR 60 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY--FAGQGIQQQ-WQMKRAMLSPRYTTRS 415 L R S ++M MD N + RG++ A Q++ W K M + YTT+ Sbjct: 61 ALIGRFD-RERSTRVMGAMDACNVRFVRGSVVPERARLAQQRRTWTTKFEMRTQCYTTQV 119 Query: 416 SDLLRV 421 +L Sbjct: 120 DELPVA 125 >UniRef50_O31841 DNA repair protein homolog yozK n=173 Tax=Bacillales RepID=YOZK_BACSU Length = 115 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 10/107 (9%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSN---NDGCVIARNAEAKA-LGVKMGDPWF 56 D+ +FYAS V + + V+ N V+A + K G+K G F Sbjct: 12 ILCVDMKSFYASVSAVAMGLNPLTCYLAVVGNTDRQGSVVLAASPALKKDFGIKTGSRLF 71 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSID 101 + + + + +L+ +S + P V YSID Sbjct: 72 E---IPEDPRIYIVNPQMKLFIRVSTEITKLFYRFVPEKCVHTYSID 115 >UniRef50_UPI00016987CF DNA-directed DNA polymerase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016987CF Length = 143 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 50/150 (33%), Gaps = 11/150 (7%) Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 F E + +R + +A R + + ++ ++ + F + + +L Sbjct: 1 FAEDVRQQSLLRSRLQRLSAEVGRLARYKGLSGQVVTLKLRLAGFETH------TRQRRL 54 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP----RP 368 + P I A + G + GV L DF G +LF+ R Sbjct: 55 VIPVDTDDLIFATAWQLYQESQLVGRPVRLIGVGLSDFE-HGPQSEDLFEATPERQMVRQ 113 Query: 369 GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 +Q+ +D + AK L G + Sbjct: 114 RRKQVFKTLDEVAAKFDSTLLTRGFYGKGK 143 >UniRef50_Q12AY4 Putative uncharacterized protein n=1 Tax=Polaromonas sp. JS666 RepID=Q12AY4_POLSJ Length = 476 Score = 65.9 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 50/341 (14%), Positives = 94/341 (27%), Gaps = 30/341 (8%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFC-DLTGVRNCRDL----TDFGREIRATVLQRTHLTVG 136 V S +PRV + DEA D+TG + A + L Sbjct: 19 RAVASMALGFTPRVALV--DEAVLMDVTGSLRLFGGLAQLMQLLEQRLAAFFEENGLQAQ 76 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 V A+ A + + + + +K ++ LP+ + R L+ Sbjct: 77 VK------RAQGATSLIALGRLRLQDGQTQTQTDTVKKRVAELPMHTLT-AARPHLGVLE 129 Query: 197 AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 +G + DL + + F L + RG E + Sbjct: 130 RIGCRNWGDLLRLPRDGVARRFGAELLEALDRARGSAPDNYEWQVLPEH-FEEKLELNAL 188 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 +T P++ + L + + I + ++ P Sbjct: 189 VTHAPALMAGVERLLVHLHAWL--LGRQSGLCALKIIWHLDKRRDVAPTGELEIRTAQPA 246 Query: 317 QDSRDIINAATRSL--DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 QD R + L + H + A +L R + ++ Sbjct: 247 QDLRHVARLVAEHLAQQKLPAPVHSLTLQSLATELLADSAAATGSLL--MEAREQGDSVV 304 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRS 415 +++ L+A+ G + Q WQ P R Sbjct: 305 ELVERLSARLGDAQV--------QAWQPCADHR-PELMQRW 336 >UniRef50_B9MJ85 Putative uncharacterized protein n=2 Tax=Comamonadaceae RepID=B9MJ85_DIAST Length = 469 Score = 65.5 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 91/330 (27%), Gaps = 20/330 (6%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFC-DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 +PRV + DEA +++G + G Sbjct: 28 AAQGWWALRFTPRVALV--DEALLLEVSGTERLWGGRA-ALQSLLRDHAPPGPETLEG-- 82 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 + A+ + R+L LPV + + R ++ L +G Sbjct: 83 ----GSLWASAPTALQALALLRLQRQGRP-VPRRLPHDLPVATLSAL-RPHAQALQQLGC 136 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 +T + + + F + G+ L+ +Q Sbjct: 137 RTWGAVRALPRAGVARRFGAEPLAALDRAWGDAPHGLDWITLPEQ-FALELELPALAESA 195 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP--YYGNSASVKLLTPTQD 318 P++ A LR+ HQ + + + ++ S +++ P Q Sbjct: 196 PALLWAGQRLLDALQGWLRARHQGVQALELAWRHDLRRIDGVDLPPWQSLTLRTAEPLQG 255 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM---T 375 + L A + + + A +L G+ Q Sbjct: 256 MAHLRRLLAERL-AHQRLAAPVSRLALRSLQTAPMPQASADLLPPQPGDAGAGQGEPWHQ 314 Query: 376 VMDTLNAKEGRGTLYFA-GQGIQQQWQMKR 404 ++ L+A+ G +L Q + M++ Sbjct: 315 FVERLSARLGADSLRVPRSQADHRPECMQQ 344 >UniRef50_A7F9S4 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7F9S4_SCLS1 Length = 594 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 31/318 (9%), Positives = 83/318 (26%), Gaps = 65/318 (20%) Query: 106 DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT-GGVV 164 D + + + +R ++ + T VGI+ K L+KL + K + T Sbjct: 170 DAELLTRLILGSHLAQYLRLSLEEEKGYTSTVGISTNKLLSKLVGNLHKPKGQTTLLPPY 229 Query: 165 DLSNLE-----RQRKLMSALPVDDVWGIGRRISKKLDAM--------------------- 198 ++ + + + + + GIG ++S+++ Sbjct: 230 EVLPNDDGLQSNATTFIDSHDIGKIPGIGFKMSQRIRNHVLSRPADFESGLIYGGTKESV 289 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLE------RTVRELRGEPCLQLEEFAPTKQEIICSRS 252 ++ V A + K + + G +++ +I S Sbjct: 290 AVRDVRLFAGMGPDTLEKILGGSGAERGIGGKAWGLINGGDDTDVKDARKVPSQISIEDS 349 Query: 253 FGERITDYPSMRQAICSYAARAAEKL--------RSEHQYCRFISTFIKT---------- 294 + ++ + P + + + ++ H + + KT Sbjct: 350 Y-IKLDNMPRLMEELRMLTTSLLNRMYQDLLEDDEESHVPSKRWIAYPKTIRLSTRPRLP 408 Query: 295 --SPFALNEPYYGNSASVKLLTPTQD---------SRDIINAATRSLDAIWQAGHR--YQ 341 + + S S L + R I + + Sbjct: 409 LNADGTRTRSFNRISRSGPLPNLVFNLKDGIDSIVERLIRDTLIPMFRKLHPQRSDWNLS 468 Query: 342 KAGVMLGDFFSQGVAQLN 359 + + + + Sbjct: 469 LVNIGVTNMVEAASEDGS 486 Score = 58.2 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SP 93 ++ N EA+ G+ + K + V+ + D S + LE+ S Sbjct: 31 IIVTCNYEARLRGLSKLQLISEAKKICPDV-VIVLGEELGRFRDASKMLYKHLEKFSWSG 89 Query: 94 RVEIYSIDEAFCDLTGVRNC 113 +VE DE F D+T + + Sbjct: 90 KVERLGFDEVFMDVTDIVDY 109 >UniRef50_C5B9L5 DNA polymerase IV n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5B9L5_EDWI9 Length = 154 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 42/137 (30%), Gaps = 30/137 (21%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 ++ F+A E G PV + GV+ P + L+R Sbjct: 17 IYMDCFFAEVEI------RGFPV-----------------RRDGVRSAMPTAQVLKLWR- 52 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTDFGREI 123 + +S + SP V+ S+DE + D++ + +I Sbjct: 53 ---TLRPGRMVVCKGVSGEIHRIFHRYSPWVDPLSLDETYLDVSDCPLHQGSAMLMTWQI 109 Query: 124 RATVLQRTHLTVGVGIA 140 A + + G+ Sbjct: 110 CADITAKR--PCSHGVG 124 >UniRef50_B9DP45 Truncated ImpB/MucB/SamB family protein (Fragment 2) n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DP45_STACT Length = 124 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 39/103 (37%) Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 G L PT ++I + D + + Y+ + L F +G+ QL Sbjct: 10 GYRDGGGVHKQFTLQEPTNLDKEIWEMVEKWADKLCEKDMLYRTLSISLTQFVPEGIQQL 69 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 NLF D R SE L +D L K G+G + A + Sbjct: 70 NLFVDEYERKRSEALAKTIDQLQQKYGKGIVSKAVSYTDAGTK 112 >UniRef50_Q8TS33 Predicted protein n=1 Tax=Methanosarcina acetivorans RepID=Q8TS33_METAC Length = 108 Score = 64.4 bits (155), Expect = 9e-09, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 36/88 (40%) Query: 198 MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 MGI V +LA+ DI+ + + F + R + G ++EE + II S +F E Sbjct: 1 MGISKVEELANCDIQRLTERFGKMGLRLKQAAHGLDFSEIEESGEAIKSIIWSSTFKENT 60 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYC 285 D + + A + L Y Sbjct: 61 NDPIKIAGYLEMLAESVHKSLFKHRLYF 88 >UniRef50_C0BD29 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BD29_9FIRM Length = 126 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 37/120 (30%), Gaps = 17/120 (14%) Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 S I+ S F S +L + + I AA D +W G + GV Sbjct: 3 SVEIRYSDFQ------NVSHQKQLGRASGADQVIYEAACSLFDELWN-GEPIRLLGVRTA 55 Query: 349 DFFSQG-VAQLNLFD---------DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + QL+LFD ++L M + K G + Q+ Sbjct: 56 KLVDEDEPEQLSLFDLQFEVKSEKPKKSMEKLKKLSAAMGEIRGKYGADAVIRGSVLEQR 115 >UniRef50_C1RL95 Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RL95_9CELL Length = 445 Score = 60.9 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 20/178 (11%), Positives = 41/178 (23%), Gaps = 21/178 (11%) Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG-------- 188 +G A A LA + ++ V ++ Sbjct: 1 MGTADGLLAAVLAARTGA-----------VVEPGLSPVFLAPHGVTELVHATTTPEQAAE 49 Query: 189 -RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 R+ L +G++T+ A + F + RG P + Sbjct: 50 VMRLVDLLHRLGLRTLGAFAALPAPDVHARFGRLGSWARTLARGLDERPPARRRPEAD-L 108 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYG 305 + + A A +L + C + +T + Sbjct: 109 EVDVELDPPVDRVDTATFAGRRLAEELHAELVARSVTCGRLQITARTDDGTELVRTWR 166 >UniRef50_UPI0001BC93B4 ultraviolet light resistance protein B, interruption-C n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC93B4 Length = 98 Score = 60.9 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%) Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 + +G NLF + P E + V+D ++ + G+GTL A W ++R M+S Sbjct: 5 NLCQKGEYTENLFSISQPVATEEII-GVLDAIDGRWGKGTLRVASVPTNPDWGLRREMMS 63 Query: 409 PRYTTRSSDLLRV 421 R+TTR L V Sbjct: 64 QRFTTRVDQLWTV 76 >UniRef50_Q0PGJ8 AIBO80 (Fragment) n=1 Tax=Bos taurus RepID=Q0PGJ8_BOVIN Length = 285 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 17/32 (53%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN 33 D++ F+ S RPDL GKPV V SN Sbjct: 77 IMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNR 108 >UniRef50_D0SUP5 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SUP5_ACILW Length = 78 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG-IQQQWQMK 403 ++L + ++F D ++ LM ++ ++ + G+ L ++W M Sbjct: 1 MILTCLEPKASYVYDMFTDMKHIELNDTLMDSLERIHVRYGKSKLALGASMIPNRRWNMS 60 Query: 404 RAMLSPRYTTRSSDLLRVK 422 R L+ Y LL VK Sbjct: 61 RDRLTQNYFM-WDQLLVVK 78 >UniRef50_A7MP32 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MP32_ENTS8 Length = 90 Score = 58.6 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 1/74 (1%) Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 DFFSQGVAQLNLFD++APR SE L+++ D N + GRGTLYFAGQGIQQ WQMKR LS Sbjct: 14 DFFSQGVAQLNLFDESAPRANSEALISLRDKFNQQ-GRGTLYFAGQGIQQSWQMKRERLS 72 Query: 409 PRYTTRSSDLLRVK 422 P TT +D+ + Sbjct: 73 PCCTTWLADVQTAR 86 >UniRef50_B3T2L8 Putative uncharacterized protein n=1 Tax=uncultured marine crenarchaeote HF4000_ANIW93E5 RepID=B3T2L8_9ARCH Length = 167 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 46/149 (30%), Gaps = 8/149 (5%) Query: 211 IRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 I +RG + APT Q + + E DY + +++ Sbjct: 2 RALINMFGRKSGTYIYTAIRGIDDEPVTIRAPTLQ-LSKISTLREDSVDYAFVEKSLLEL 60 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 + + E++ R + + + + S L PT ++ N + + L Sbjct: 61 CEKLHLSILEENKIFRSVGIHLTQDDLSTK------TRSRMLRHPTLSLDELKNVSRQLL 114 Query: 331 DA-IWQAGHRYQKAGVMLGDFFSQGVAQL 358 + ++ GV + + + Sbjct: 115 KEVLEDQSTLVRRLGVKVSELSELEGSSD 143 >UniRef50_A7MTX6 Putative uncharacterized protein n=3 Tax=Vibrio RepID=A7MTX6_VIBHB Length = 86 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 27/38 (71%), Positives = 31/38 (81%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVI 38 MFAL D NAFY S E VFRP+ GKP+VVLSNNDGC++ Sbjct: 1 MFALVDANAFYCSAEQVFRPEWRGKPIVVLSNNDGCLV 38 >UniRef50_Q2IIA1 Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IIA1_ANADE Length = 551 Score = 56.3 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 45/354 (12%), Positives = 76/354 (21%), Gaps = 32/354 (9%) Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCD------ 106 + R V + + L ++P VE+ + D D Sbjct: 60 QSAAEALAACGRLETVVR--DPAADLVALRALAEVLLGIAPAVEVAAPDALLLDAGAARL 117 Query: 107 -------LTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR- 158 + + +A + A + Sbjct: 118 LAAGAGAVPPGGAFGPGEERLAHRAVQAAADMGYAARAVVATGRGPAAALARYGRFDGAV 177 Query: 159 QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF 218 + L A GR + + LA + F Sbjct: 178 HGVAPGGAAAAAALAGLPLAALGLAPAVAGRLAAVGVAGA-----GALARLPEGTLAHRF 232 Query: 219 NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 R R RGE L P S + + A R A +L Sbjct: 233 GPEGVRAARLARGEDASPLVPHVPET-LPQESLELEAPAEGAEPLLFGLKRLADRVAARL 291 Query: 279 RSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH 338 + + P V L P+ + + L + G Sbjct: 292 AGRGLGATRLRLVLALDPRGEER------IQVPLSQPSASAARWLVPVKEHLFTLRLPG- 344 Query: 339 RYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 ++ + QL D L V+ L + G G L+ A Sbjct: 345 AVTALRLVAAEVAPVAAEQLAFGDRPEAV---AALDGVLARLAVRLGDGALFAA 395 >UniRef50_B8IIJ8 Putative uncharacterized protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IIJ8_METNO Length = 119 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 9/100 (9%) Query: 324 NAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 + W R D + LF R LM MD N + Sbjct: 12 RLCMEASVGEWLRRRRI------TTDLVRLAESPRALFGSLD-RERGGALMAAMDACNRR 64 Query: 384 EGRGTLYFAGQGIQ--QQWQMKRAMLSPRYTTRSSDLLRV 421 GRGT+ A G++ ++W K + +PRYTTR +++ V Sbjct: 65 FGRGTVVPARAGLEAKRRWATKFELRTPRYTTRLAEVPVV 104 >UniRef50_D1PMK7 UV-damage repair protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PMK7_9FIRM Length = 121 Score = 54.4 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 4/79 (5%) Query: 74 YELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQ 129 Y S R+ + + + +YSIDE D+T + + REI VL Sbjct: 1 MAFYMQYSARIYNIYRKYIAPEDIIVYSIDEVLMDVTEYLHTYHMSAQELAREIIVDVLN 60 Query: 130 RTHLTVGVGIAQTKTLAKL 148 T +T GI K Sbjct: 61 TTGITAAAGIGTNLFCVKW 79 >UniRef50_C1RL94 Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RL94_9CELL Length = 173 Score = 54.4 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 4/92 (4%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 P V + A +A A+A GV+ G + + + +V + + Sbjct: 25 PVDVPAAVHDGRR--ITAVSALARADGVRRGMRRRQAQGVCPE--LVLLPVDDARDVRLF 80 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC 113 V + E + VE+ G Sbjct: 81 EPVAAATETVVAGVEVARPGMLLLPAGGAARF 112 >UniRef50_A2W7A2 Putative uncharacterized protein n=1 Tax=Burkholderia dolosa AUO158 RepID=A2W7A2_9BURK Length = 366 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 23/198 (11%), Positives = 52/198 (26%), Gaps = 6/198 (3%) Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 A L V A T A L + + + + + LP Sbjct: 47 CARTLAALGYAARVSAAPTAGGAWLLARVS----ARARVRRRVIGHASFVRALDGLPCGL 102 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 + R + D +G +T+ DL +++ L + G ++ + P Sbjct: 103 LRD-ARAHAGWFDGLGCRTLADLRRLPRAGLQRRCGPALLAALDRAYG-DAVEPIAWMPV 160 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 ER+ ++ A + L + ++ ++ Sbjct: 161 PPVFDVRLELPERVEYAEAVLFAARRLVVQLCGWLAARQLSLAAMTFGLEHERGRQGRAA 220 Query: 304 YGNSASVKLLTPTQDSRD 321 V+ + + Sbjct: 221 DAARTRVRDARARRSAFH 238 >UniRef50_Q93QE1 Orf5 n=6 Tax=Streptococcus RepID=Q93QE1_STRPN Length = 143 Score = 53.6 bits (127), Expect = 2e-05, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 44/120 (36%), Gaps = 2/120 (1%) Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + ++ E +A K+ P + + + T + + +G ++ GV Sbjct: 13 TTVVSIHIGYSRTEMKKSINAQNKI-EPANLPKTMGESCTCIIPKKYTSG-AVRQIGVSY 70 Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 F + L+LFDD +L T +D + + G + + ++R+ L Sbjct: 71 SGFVDESYTLLSLFDDVEQIEKDNRLQTAIDVVREQFGFLAIQKGTVLTEGSRNIERSKL 130 >UniRef50_C4QSD8 DNA polymerase IV / kappa, putative (Fragment) n=1 Tax=Schistosoma mansoni RepID=C4QSD8_SCHMA Length = 121 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 4/92 (4%) Query: 93 PRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA 152 P +E+ C + RE+R V T LT G+ +AK+A+ Sbjct: 32 PELEVCIECGLLCKSGRRIFGLSAWEAVREMRFRVFCATRLTCSAGLGPNTLIAKIASDW 91 Query: 153 AKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 K + + E K M +PV V Sbjct: 92 IKPCGQHEIA----NTSEAVDKFMQTMPVRKV 119 >UniRef50_A6GQI5 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GQI5_9BURK Length = 428 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 32/323 (9%), Positives = 62/323 (19%), Gaps = 22/323 (6%) Query: 84 VMSTLEELSPRV-----EIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVG 138 + SP V + + ++ + + Sbjct: 1 MFELASHYSPVVCWRQDQHHEYVGWLVEVHSSFRLFGGAQALLSQLWQSADEFPGELQLA 60 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 T T A +A Q + L+ E + +D ++ Sbjct: 61 NHHTATGAWWLGKSA-PAGNQDDFLAMLNFNENSLLALPISVLD----CDAKLQITWRQC 115 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP--TKQEIICSRSFGER 256 G + DL K F + G P + Sbjct: 116 GFGRLGDLWRLPRDGFLKRFGAQALAELDSGFGVQNKLATSTVPHKPADTFEQEKELPFH 175 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 + + L+ + R + + T Sbjct: 176 SDRLDLIEHHAQALLDAVCNWLKQQKHGTRELHWAFIHTHGEEVLHLRS-------AQAT 228 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 L + + V + D A + Sbjct: 229 DCLDTWRRLLHHQLGRMQFED-DIRNLRVQCTHSELLPNVNHSFLPDPAEGARNW--NNT 285 Query: 377 MDTLNAKEGRGTLYFAGQGIQQQ 399 D L A+ G T+ FA + Sbjct: 286 CDILRARLGEQTVLFAATDSDPR 308 >UniRef50_A8UAE8 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UAE8_9LACT Length = 110 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 6/96 (6%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--P 93 + A K G+K G ++ + R + LY ++ + + E Sbjct: 18 VLAASTRVKKEYGIKTGSRRYE---IPRHSFIQIVEPRMTLYLRINEIINAIFLEFVSEN 74 Query: 94 RVEIYSIDEAFCDLTGVRNCRDLT-DFGREIRATVL 128 + +YSIDE+F D+T T + +I+AT+ Sbjct: 75 DLHLYSIDESFLDVTASNTLYGSTKEIALKIQATIW 110 >UniRef50_UPI00016B15B1 hypothetical protein BpseBC_02629 n=8 Tax=pseudomallei group RepID=UPI00016B15B1 Length = 152 Score = 50.9 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 33/126 (26%), Gaps = 4/126 (3%) Query: 27 VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 VL V+ +A A+A GV+ G L + + AD V Sbjct: 28 CAVLEQG--VVLIADAPARANGVRAGMKRGGVLTLAPGTRL--VERDPAREADALRAVAL 83 Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 L SP V + D+ L V A T A Sbjct: 84 ALLRFSPCVALDDEATLVVDVGASLRLFGGLPSLCRQVRATLAALGYAARVAAAPTGRGA 143 Query: 147 KLANHA 152 L A Sbjct: 144 WLLARA 149 >UniRef50_Q21Z43 Putative uncharacterized protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21Z43_RHOFD Length = 431 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 36/337 (10%), Positives = 91/337 (27%), Gaps = 33/337 (9%) Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 ++ D + + +P+V D +++ R + + Sbjct: 5 PEADVDPDAIPALGGWALQYTPKVARLD-DALLLEVSASERLWGG---WRALLRQIYT-- 58 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW----GI 187 K +A + Q G ++ Q K ++ DD+ Sbjct: 59 ---------SNKPVATV--------QYARGATSLIAYARLQDKTLARTSPDDLPLHTLAA 101 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 R L+ +G L + + F L + G +L + Sbjct: 102 ARPHLATLERLGCNHWGQLRALPRGGVARRFGAPLLAALDRAYGLQP-ELYPWLALPDVF 160 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 + + G ++ P++ + L+ H+ + Sbjct: 161 DVTLALGAQVETAPALLFGARRLFQQLQLWLQLRHRGVLALELCWSMDARRNTATQGQL- 219 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 ++ P+ D ++ A L + + + +L D R Sbjct: 220 -PLRSAEPSADMAHLLRLAGEQLARVTLP-APVHALRLRTLETQKLAGETASLLPDA--R 275 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 + L +++ L+A+ G + + + + + Sbjct: 276 RSGDSLQQLLERLSARLGAQQVLQMQPCDEHRPEKMQ 312 >UniRef50_Q6F8Y8 Fragment of component of DNA polymerase V (UmuC) (Part 2) pseudogene n=2 Tax=Acinetobacter RepID=Q6F8Y8_ACIAD Length = 64 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 22/43 (51%), Positives = 29/43 (67%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAE 43 +FAL D+N Y SCE +F P L G+PV+VLS+NDG + E Sbjct: 19 IFALIDINNAYVSCERIFEPKLNGRPVIVLSSNDGQRSPLDYE 61 >UniRef50_D0AI08 UvrA protein (Fragment) n=3 Tax=Enterococcus faecium RepID=D0AI08_ENTFC Length = 133 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 38/118 (32%), Gaps = 12/118 (10%) Query: 34 DGCVIARNAEAKA-LGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 + A + EAK + LF + V LY + RV + + Sbjct: 5 RIDIRASSPEAKKRYDITNVSRPRDLSQLFPKTSYV-VPPRMNLYIKRNMRVNNIFKRYV 63 Query: 93 PR--VEIYSIDEAFCDLTGVRNCRDLT--------DFGREIRATVLQRTHLTVGVGIA 140 + +Y IDE +T N F + I+ + + L VG+A Sbjct: 64 ADEDLLMYPIDEPILKVTRSLNIFTTEGTRSQRRKKFVQMIQERIKEELGLIATVGVA 121 >UniRef50_A9MHU5 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MHU5_SALAR Length = 86 Score = 48.6 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 45/62 (72%), Positives = 48/62 (77%) Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 FFSQGV QLNLFDDNAPR GSE+LM V+D LNAKEGRG L G+GIQQQ MKR M S Sbjct: 9 GFFSQGVVQLNLFDDNAPRAGSEKLMEVLDHLNAKEGRGILISLGEGIQQQLAMKRDMRS 68 Query: 409 PR 410 R Sbjct: 69 SR 70 >UniRef50_B0TUJ6 Putative uncharacterized protein n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TUJ6_SHEHH Length = 50 Score = 48.2 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 22/37 (59%) Query: 386 RGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 + L + I +W M+R ML+P+YTTR D+ +K Sbjct: 13 KRALIKMAKWISLKWGMRREMLTPQYTTRWKDIPLIK 49 >UniRef50_A5UTK6 Putative uncharacterized protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UTK6_ROSS1 Length = 431 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 33/106 (31%) Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 +E + + + GIG I+++L A GI T +A + +H E+ VR Sbjct: 169 PVEPAAERFHQDDLQQIPGIGPAIARRLHAAGISTFAAVAACTPAELARHTGRSAEQIVR 228 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 E L + + + E + Sbjct: 229 MGWIERARDLALSSRAESQPAPETKEREDMVSEEPSILFAAILLDE 274 >UniRef50_Q5JTF2 Polymerase (DNA directed), eta (Fragment) n=5 Tax=Coelomata RepID=Q5JTF2_HUMAN Length = 72 Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 23/65 (35%), Gaps = 6/65 (9%) Query: 53 DPWFKQKDLFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 K L + +N Y + S VM + + +E SIDEA+ DL Sbjct: 1 MWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRFA-VIERASIDEAYVDL 59 Query: 108 TGVRN 112 T Sbjct: 60 TSAVQ 64 >UniRef50_UPI0000D52C0C Hypothetical Cytosolic Protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D52C0C Length = 134 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 4/83 (4%) Query: 15 ETVFRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 E V + P V+ + + A N A+A G+ G + L + Sbjct: 38 EIVMPAEKRDTPFVLAEHQRGTQRLAAVNIAAEACGLHTGMALADARVLVPDMHIEML-- 95 Query: 73 NYELYADMSNRVMSTLEELSPRV 95 + A ++ L +P V Sbjct: 96 DPARGAAALDKCARWLRRYTPWV 118 >UniRef50_B9K728 Nuclease (RecB family)-like protein n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9K728_THENN Length = 400 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVR 227 + ++KL+ + V GIG + L MGI+T+ DL++ D R + K F R + Sbjct: 165 EDCEKKLLERKSLLLVNGIGEETRRILYEMGIETIEDLSNADQRAMEKIFGKEKGRRFIL 224 Query: 228 ELRGEPCLQLEEFAPTKQ 245 R ++ P ++ Sbjct: 225 AARAFLEDRVIVIEPPER 242 >UniRef50_B8IQT5 Putative uncharacterized protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IQT5_METNO Length = 93 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%) Query: 381 NAKEGRGTLYFAGQGI--QQQWQMKRAMLSPRYTTRSSDLLRV 421 NA+ GRG + A G+ ++ W + M +PRYTTR +L V Sbjct: 46 NARFGRGAVVPARAGLVDKRTWSTRFEMRTPRYTTRPDELPVV 88 >UniRef50_Q1CC71 Error-prone repair protein UmuC n=9 Tax=Yersinia pestis RepID=Q1CC71_YERPN Length = 48 Score = 45.5 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 15/29 (51%), Positives = 20/29 (68%) Query: 394 QGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 +G+ +W +KR MLSP YTTR S+L K Sbjct: 19 EGVASEWHIKREMLSPAYTTRWSELPIAK 47 >UniRef50_B8GE44 Putative uncharacterized protein n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GE44_METPE Length = 362 Score = 44.3 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 29/237 (12%), Positives = 56/237 (23%), Gaps = 21/237 (8%) Query: 156 WQRQTGGVVDLSNLE-RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 +Q L + + + + + GIG R + L G +T+ DL Sbjct: 87 YQVTDSVDCRLDRPDPDLLRTLLWEDLTLIPGIGARTAASLQRRGYRTINDL------IW 140 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF--GERIT-------DYPSMRQ 265 + F R R + L + ++ +F G + D ++ Sbjct: 141 NRRFREEASRVQRRIEMTDRNDLLDLVLSRHSRSHRLAFLAGSPLQKSDLLFFDIETLGF 200 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSP----FALNEPYYGNSASVKLLTPTQDSRD 321 +LR A + + + + + D Sbjct: 201 FSRPIILFGLARLRENQLITTQFLLKGVRDEQAALMATLKLFSPGTVLITFNGRSFDLPY 260 Query: 322 I-INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVM 377 + A L L Q L + L + M Sbjct: 261 LQERCAYYRLPEPRLPQIDLLHHSRSLWKNQFQDCKLGTLEAKLCGTVREDDLPSAM 317 >UniRef50_D1REI8 Putative uncharacterized protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1REI8_LEGLO Length = 1277 Score = 43.2 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 7/79 (8%) Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 + PV + G+ + + L+ +GIKT+ DLA + I + GE + Sbjct: 21 SQPVSTLLGVSNQTEQTLNKLGIKTIYDLATCPLFLI-------AQDIASAANGEGHSII 73 Query: 238 EEFAPTKQEIICSRSFGER 256 II S Sbjct: 74 ARSGRISSSIINPDSPQTP 92 >UniRef50_A7NMG2 Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NMG2_ROSCS Length = 437 Score = 42.8 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 3/84 (3%) Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + + GIG I+++L GI T LA + E+ VR E L Sbjct: 109 DLQQIPGIGPAIARRLRTAGITTFAALAACSPSDLAAWTGRSAEQIVRMGWIERARDLTH 168 Query: 240 FAPTKQEIICSRSFGERITDYPSM 263 P + + + + + Sbjct: 169 PTPP---LEATATEPSPVETAAAA 189 >UniRef50_A4X7V6 Putative uncharacterized protein n=2 Tax=Salinispora RepID=A4X7V6_SALTO Length = 251 Score = 42.8 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 11/89 (12%) Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 A + A K +G + + G+G +++ L Sbjct: 141 SAVAADSGPEPDTATAEPKPDTAASGP-----EPDATDDF------RRIQGVGPKMAAAL 189 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLER 224 A GI+T LA+ D+ +R+ R Sbjct: 190 HAAGIRTYRQLAELDVAALRETIRAAGLR 218 >UniRef50_C8WW85 ATP-dependent DNA helicase RecG n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW85_ALIAD Length = 678 Score = 42.4 bits (98), Expect = 0.030, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR----ELRG 231 + +L V + G+G + + L+A+GI+TV DL T + R Sbjct: 3 LRSLSVRALPGVGPQKERALEALGIRTVDDLLHTYPFRYDERAEKPFSEWRDGDRVTARA 62 Query: 232 EPCLQLEEFAPTKQEIICSR 251 ++ + I+ +R Sbjct: 63 VVEGPVQVRWRGSKSIMTAR 82 >UniRef50_B8IBL2 Molybdenum cofactor biosynthesis protein n=2 Tax=Methylobacterium RepID=B8IBL2_METNO Length = 134 Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 32/83 (38%), Gaps = 3/83 (3%) Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 GIA T+ L A R+ + + + + + G+ R +++ L+ Sbjct: 22 AGIATTEALLTRAGD---PDGRRQLAQATGIDAALLLRWVGRCDLFRIHGLARPMTELLE 78 Query: 197 AMGIKTVLDLADTDIRFIRKHFN 219 A GI TV DLA + + Sbjct: 79 AAGICTVADLARQNADSLVDTLT 101 >UniRef50_A4YMQ8 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YMQ8_BRASO Length = 254 Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 23/59 (38%) Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 R L S+ +D++ +G + KL + I+TV +LA +R Sbjct: 182 IKHGFVRSLASSRDIDELRALGPALKAKLRRLNIRTVGELAAQRPDHLRTLLGPPGRLI 240 >UniRef50_C2FQ54 Putative uncharacterized protein n=1 Tax=Lactobacillus plantarum subsp. plantarum ATCC 14917 RepID=C2FQ54_LACPL Length = 56 Score = 40.9 bits (94), Expect = 0.086, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 17/54 (31%), Gaps = 1/54 (1%) Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 W G + V QL+LF + QL V+D ++ Sbjct: 1 MFRKNWD-GQAVRNIAVYSNKLSPDTGQQLDLFSQPTQQIRHNQLNRVIDDIHQ 53 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P04152 Protein umuC n=103 Tax=Gammaproteobacteria RepID... 377 e-103 UniRef50_A4SWQ9 DNA-directed DNA polymerase n=13 Tax=cellular or... 351 3e-95 UniRef50_Q5N669 DNA polymerase V n=9 Tax=Bacteria RepID=Q5N669_S... 348 2e-94 UniRef50_A0L9G4 DNA-directed DNA polymerase n=1 Tax=Magnetococcu... 343 7e-93 UniRef50_B8FBE8 DNA polymerase IV n=1 Tax=Desulfatibacillum alke... 342 1e-92 UniRef50_D2QVG5 DNA-directed DNA polymerase n=1 Tax=Spirosoma li... 337 7e-91 UniRef50_A1U8F5 DNA-directed DNA polymerase n=6 Tax=Gammaproteob... 335 2e-90 UniRef50_Q3ABL2 DNA polymerase IV n=4 Tax=Firmicutes RepID=DPO4_... 335 2e-90 UniRef50_C0GDP3 DNA-directed DNA polymerase n=1 Tax=Dethiobacter... 335 2e-90 UniRef50_Q0AX85 DNA-directed DNA polymerase n=1 Tax=Syntrophomon... 334 5e-90 UniRef50_B7JBK8 UmuC protein n=1 Tax=Acidithiobacillus ferrooxid... 333 8e-90 UniRef50_Q11V03 Nucleotidyltransferase/DNA polymerase involved i... 331 2e-89 UniRef50_B9M459 DNA-directed DNA polymerase n=14 Tax=Bacteria Re... 331 3e-89 UniRef50_B0VH44 Protein umuC n=1 Tax=Candidatus Cloacamonas acid... 330 5e-89 UniRef50_A1BFA1 DNA-directed DNA polymerase n=7 Tax=Chlorobiacea... 330 6e-89 UniRef50_C3X802 DNA-directed DNA polymerase n=1 Tax=Oxalobacter ... 328 2e-88 UniRef50_B2A8L2 DNA-directed DNA polymerase n=1 Tax=Natranaerobi... 328 3e-88 UniRef50_C6BW91 DNA-directed DNA polymerase n=4 Tax=Bacteria Rep... 327 4e-88 UniRef50_A6ET82 Nucleotidyltransferase/DNA polymerase involved i... 324 4e-87 UniRef50_Q39ZU3 Damage-inducible protein DinP n=1 Tax=Pelobacter... 324 5e-87 UniRef50_C6PAP1 DNA-directed DNA polymerase n=1 Tax=Thermoanaero... 323 7e-87 UniRef50_C6BX75 DNA-directed DNA polymerase n=1 Tax=Desulfovibri... 322 1e-86 UniRef50_C8X3R0 DNA-directed DNA polymerase n=1 Tax=Desulfohalob... 322 2e-86 UniRef50_A9E9W4 Nucleotidyltransferase/DNA polymerase involved i... 322 2e-86 UniRef50_Q0VP68 DNA-damage-inducible protein n=4 Tax=Proteobacte... 321 3e-86 UniRef50_A0LG84 DNA-directed DNA polymerase n=4 Tax=Deltaproteob... 321 3e-86 UniRef50_Q11QJ9 Nucleotidyltransferase/DNA polymerase involved i... 321 4e-86 UniRef50_C7RB82 DNA-directed DNA polymerase n=1 Tax=Kangiella ko... 320 5e-86 UniRef50_C0QCD0 UmuC1 n=3 Tax=Desulfobacterium autotrophicum HRM... 320 5e-86 UniRef50_B8CWI6 DNA-directed DNA polymerase n=1 Tax=Halothermoth... 320 6e-86 UniRef50_C6M791 Protein UmuC n=2 Tax=Neisseria RepID=C6M791_NEISI 320 6e-86 UniRef50_C6CYA7 DNA-directed DNA polymerase n=3 Tax=Bacillales R... 320 7e-86 UniRef50_Q2W5K5 Nucleotidyltransferase/DNA polymerase involved i... 320 9e-86 UniRef50_A5Y0S5 UmuC-like protein n=9 Tax=Proteobacteria RepID=A... 319 1e-85 UniRef50_P07375 Protein mucB n=137 Tax=root RepID=MUCB_ECOLX 319 2e-85 UniRef50_C0VGI8 Nucleotidyltransferase/DNA polymerase n=4 Tax=Ac... 318 2e-85 UniRef50_C6XDV2 DNA-directed DNA polymerase n=2 Tax=Methylovorus... 317 5e-85 UniRef50_A5FIG7 DNA-directed DNA polymerase n=10 Tax=cellular or... 316 1e-84 UniRef50_A8ZLK7 DNA polymerase V, putative n=4 Tax=Cyanobacteria... 316 1e-84 UniRef50_Q48B37 RulB protein n=30 Tax=Pseudomonas RepID=Q48B37_P... 315 2e-84 UniRef50_B4YK21 TumC n=1 Tax=Tetrathiobacter kashmirensis RepID=... 315 2e-84 UniRef50_Q818U9 DNA polymerase IV n=137 Tax=Bacillaceae RepID=DP... 315 2e-84 UniRef50_A8ZS21 DNA-directed DNA polymerase n=1 Tax=Desulfococcu... 314 3e-84 UniRef50_B5JVF1 UmuC protein n=1 Tax=gamma proteobacterium HTCC5... 314 4e-84 UniRef50_C7LWM3 DNA-directed DNA polymerase n=1 Tax=Desulfomicro... 313 5e-84 UniRef50_C8X192 DNA-directed DNA polymerase n=2 Tax=Deltaproteob... 313 5e-84 UniRef50_Q15TC7 DNA-directed DNA polymerase n=25 Tax=Proteobacte... 312 1e-83 UniRef50_A6CAV0 DNA-damage-inducible protein P n=2 Tax=Planctomy... 311 3e-83 UniRef50_P58965 DNA polymerase IV n=29 Tax=Clostridia RepID=DPO4... 310 5e-83 UniRef50_Q5ZUT9 SOS mutagenesis and repair UmuC protein n=12 Tax... 310 6e-83 UniRef50_B2FJL0 Putative UV protection and mutation protein n=1 ... 310 6e-83 UniRef50_Q0ACU7 DNA-directed DNA polymerase n=3 Tax=Nitrosomonas... 310 8e-83 UniRef50_A3DH61 DNA polymerase IV n=9 Tax=Clostridiales RepID=DP... 309 1e-82 UniRef50_C9LED2 UmuC protein n=1 Tax=Prevotella tannerae ATCC 51... 309 1e-82 UniRef50_C0WCT4 DNA-directed DNA polymerase n=1 Tax=Acidaminococ... 308 3e-82 UniRef50_C0QJE1 DinP n=1 Tax=Desulfobacterium autotrophicum HRM2... 307 4e-82 UniRef50_B4WV07 ImpB/MucB/SamB family n=6 Tax=Synechococcus sp. ... 307 5e-82 UniRef50_D0Z2K2 Error-prone repair protein UmuC n=5 Tax=Photobac... 307 6e-82 UniRef50_A5CQW8 DNA polymerase IV n=18 Tax=Actinobacteria (class... 307 7e-82 UniRef50_C7I5S1 DNA-directed DNA polymerase n=2 Tax=Proteobacter... 306 9e-82 UniRef50_C6XEM8 DNA-directed DNA polymerase n=1 Tax=Methylovorus... 305 1e-81 UniRef50_Q1QXT4 DNA-directed DNA polymerase n=1 Tax=Chromohaloba... 305 2e-81 UniRef50_B0PEH3 Putative uncharacterized protein n=2 Tax=Clostri... 305 2e-81 UniRef50_C9KLE5 DNA polymerase IV n=2 Tax=Veillonellaceae RepID=... 305 2e-81 UniRef50_UPI0000E87FBE DNA repair protein n=1 Tax=Methylophilale... 305 3e-81 UniRef50_D0J481 DNA-directed DNA polymerase n=4 Tax=cellular org... 305 3e-81 UniRef50_D0RPK3 Protein UmuC n=1 Tax=alpha proteobacterium HIMB1... 305 3e-81 UniRef50_D1R5W7 Putative uncharacterized protein n=1 Tax=Parachl... 304 4e-81 UniRef50_B9JZV6 DNA-damage-inducible protein n=17 Tax=Bacteria R... 304 4e-81 UniRef50_D1PR84 DNA-directed DNA polymerase n=1 Tax=Subdoligranu... 304 4e-81 UniRef50_P54560 DNA polymerase IV 2 n=8 Tax=Bacillales RepID=DPO... 303 7e-81 UniRef50_C4G590 Putative uncharacterized protein n=3 Tax=Firmicu... 303 7e-81 UniRef50_C7H2N6 DNA polymerase IV n=8 Tax=Bacteria RepID=C7H2N6_... 303 1e-80 UniRef50_C5D272 DNA-directed DNA polymerase n=5 Tax=Geobacillus ... 303 1e-80 UniRef50_B8DIF6 DNA-directed DNA polymerase n=6 Tax=Desulfovibri... 302 2e-80 UniRef50_C9LBG3 DNA polymerase IV n=6 Tax=Clostridiales RepID=C9... 302 2e-80 UniRef50_A4CII2 DNA polymerase IV n=20 Tax=cellular organisms Re... 302 2e-80 UniRef50_C8NE97 DNA-directed DNA polymerase n=2 Tax=Granulicatel... 302 2e-80 UniRef50_Q4FMY4 UmuC n=6 Tax=Bacteria RepID=Q4FMY4_PELUB 300 5e-80 UniRef50_B9MMT7 DNA-directed DNA polymerase n=2 Tax=Clostridia R... 300 5e-80 UniRef50_D0KZ56 DNA-directed DNA polymerase n=12 Tax=root RepID=... 300 7e-80 UniRef50_D1PC12 UmuC protein n=2 Tax=Bacteria RepID=D1PC12_9BACT 300 8e-80 UniRef50_Q7USY7 DNA polymerase IV n=1 Tax=Rhodopirellula baltica... 300 9e-80 UniRef50_C6VYA9 DNA-directed DNA polymerase n=15 Tax=Bacteroidet... 299 1e-79 UniRef50_Q1IRF1 DNA-directed DNA polymerase n=2 Tax=Acidobacteri... 299 1e-79 UniRef50_Q30X29 DNA-directed DNA polymerase n=8 Tax=Proteobacter... 299 1e-79 UniRef50_A5N2U5 DNA polymerase IV n=5 Tax=Clostridiaceae RepID=D... 299 2e-79 UniRef50_C9LNT4 ATP-NAD kinase n=1 Tax=Dialister invisus DSM 154... 299 2e-79 UniRef50_Q19NE6 UV protection and repair protein n=9 Tax=Enterob... 298 3e-79 UniRef50_B6BWB3 DNA-directed DNA polymerase n=1 Tax=beta proteob... 298 4e-79 UniRef50_D1C0B2 DNA-directed DNA polymerase n=2 Tax=Actinomyceta... 296 1e-78 UniRef50_Q2YI99 Nucleotidyltransferase/DNA polymerase n=3 Tax=Ba... 296 1e-78 UniRef50_A6WU94 DNA-directed DNA polymerase n=28 Tax=Gammaproteo... 296 1e-78 UniRef50_A4ECH9 Putative uncharacterized protein n=1 Tax=Collins... 296 1e-78 UniRef50_A5D243 DNA polymerase IV n=4 Tax=Clostridia RepID=DPO4_... 296 1e-78 UniRef50_B2I3H3 Nucleotidyltransferase/DNA polymerase n=12 Tax=A... 295 1e-78 UniRef50_C0FVJ8 Putative uncharacterized protein n=1 Tax=Rosebur... 295 2e-78 UniRef50_B3E0C4 Nucleotidyltransferase/DNA polymerase UmuC n=1 T... 295 2e-78 UniRef50_A5FSS1 DNA polymerase IV n=5 Tax=Dehalococcoides RepID=... 295 2e-78 UniRef50_UPI0001982DE6 PREDICTED: hypothetical protein n=1 Tax=V... 295 2e-78 UniRef50_Q31B23 DNA-directed DNA polymerase n=7 Tax=Prochlorococ... 295 2e-78 UniRef50_C0YV48 Probable RumB/ImpB like DNA repair protein n=1 T... 295 3e-78 UniRef50_B9Z6P1 DNA-directed DNA polymerase n=2 Tax=Proteobacter... 295 3e-78 UniRef50_A6EED8 Nucleotidyltransferase/DNA polymerase involved i... 295 3e-78 UniRef50_Q0AWD6 DNA-directed DNA polymerase n=7 Tax=Bacteria Rep... 294 4e-78 UniRef50_Q3AKE9 DNA-directed DNA polymerase n=7 Tax=Bacteria Rep... 294 4e-78 UniRef50_Q18A91 DNA polymerase IV n=46 Tax=Bacteria RepID=DPO4_C... 294 4e-78 UniRef50_D0WQX0 DNA polymerase IV n=1 Tax=Actinomyces sp. oral t... 294 4e-78 UniRef50_A5GPY7 Bacterial UmuC protein homolog (SOS-regulated pr... 294 5e-78 UniRef50_C9RDA6 DNA-directed DNA polymerase n=1 Tax=Ammonifex de... 293 1e-77 UniRef50_A5FU54 UMUC domain protein DNA-repair protein n=2 Tax=A... 292 1e-77 UniRef50_Q97MB3 DNA polymerase IV n=1 Tax=Clostridium acetobutyl... 292 2e-77 UniRef50_C0ZFX0 DNA polymerase IV n=6 Tax=Bacillales RepID=C0ZFX... 292 2e-77 UniRef50_A9KLV9 DNA-directed DNA polymerase n=8 Tax=Clostridiale... 290 5e-77 UniRef50_Q3B3L9 DNA-directed DNA polymerase n=2 Tax=Chlorobium/P... 290 6e-77 UniRef50_B8G1R4 DNA-directed DNA polymerase n=2 Tax=Desulfitobac... 290 6e-77 UniRef50_A0M5X6 DNA polymerase IV n=19 Tax=Bacteroidetes RepID=A... 290 7e-77 UniRef50_D1VXB9 Putative DNA polymerase V subunit UmuC n=1 Tax=P... 290 7e-77 UniRef50_C4L3M4 DNA-directed DNA polymerase n=1 Tax=Exiguobacter... 290 8e-77 UniRef50_Q4L7K8 DNA polymerase IV n=65 Tax=Staphylococcaceae Rep... 290 8e-77 UniRef50_Q67QM6 DNA polymerase IV n=1 Tax=Symbiobacterium thermo... 290 8e-77 UniRef50_A9W7Y3 DNA-directed DNA polymerase n=10 Tax=Rhizobiales... 290 9e-77 UniRef50_C5BW73 DNA-directed DNA polymerase n=4 Tax=Actinomyceta... 290 9e-77 UniRef50_B7AQS7 Putative uncharacterized protein n=1 Tax=Bactero... 290 9e-77 UniRef50_D1PGW5 DNA-directed DNA polymerase n=1 Tax=Prevotella c... 289 1e-76 UniRef50_A7REV5 Predicted protein (Fragment) n=1 Tax=Nematostell... 289 1e-76 UniRef50_Q2RYM0 UmuC protein n=2 Tax=Salinibacter ruber DSM 1385... 289 1e-76 UniRef50_B8DRU5 DNA-directed DNA polymerase n=13 Tax=Proteobacte... 289 2e-76 UniRef50_D2MQ51 Putative DNA polymerase IV n=1 Tax=Bulleidia ext... 288 2e-76 UniRef50_C7R3I3 DNA-directed DNA polymerase n=1 Tax=Jonesia deni... 288 2e-76 UniRef50_C8P3H3 DNA polymerase IV (Pol IV) n=1 Tax=Erysipelothri... 288 2e-76 UniRef50_A9KNH1 DNA-directed DNA polymerase n=4 Tax=Clostridiale... 288 3e-76 UniRef50_Q1QAG3 DNA-directed DNA polymerase n=2 Tax=Psychrobacte... 288 3e-76 UniRef50_C0D1Q6 Putative uncharacterized protein n=2 Tax=Clostri... 288 3e-76 UniRef50_C6WDG0 DNA-directed DNA polymerase n=8 Tax=Actinomyceta... 288 3e-76 UniRef50_C7NIB1 Nucleotidyltransferase/DNA polymerase involved i... 287 4e-76 UniRef50_A6NU31 Putative uncharacterized protein n=4 Tax=Bacteri... 287 4e-76 UniRef50_Q73P36 DNA polymerase IV n=2 Tax=Treponema RepID=DPO4_T... 287 4e-76 UniRef50_B5EN92 DNA-directed DNA polymerase n=2 Tax=Acidithiobac... 287 5e-76 UniRef50_D1VVF6 DNA polymerase IV n=1 Tax=Peptoniphilus lacrimal... 287 5e-76 UniRef50_B9YCM9 Putative uncharacterized protein n=1 Tax=Holdema... 287 6e-76 UniRef50_C1A1E2 DNA polymerase IV n=28 Tax=Actinobacteria (class... 287 7e-76 UniRef50_B1CA62 Putative uncharacterized protein n=1 Tax=Anaerof... 287 7e-76 UniRef50_A8RF31 Putative uncharacterized protein n=1 Tax=Eubacte... 287 8e-76 UniRef50_C6XT23 DNA-directed DNA polymerase n=1 Tax=Pedobacter h... 286 1e-75 UniRef50_C8WAH8 DNA-directed DNA polymerase n=3 Tax=Coriobacteri... 285 1e-75 UniRef50_A3CSG3 DNA polymerase IV n=4 Tax=Methanomicrobia RepID=... 285 2e-75 UniRef50_Q2P505 Polymerase V subunit n=4 Tax=Xanthomonadaceae Re... 285 2e-75 UniRef50_C6NY09 DNA polymerase IV n=2 Tax=Bacteria RepID=C6NY09_... 285 2e-75 UniRef50_C4GAM5 Putative uncharacterized protein n=1 Tax=Shuttle... 285 2e-75 UniRef50_B1YK83 DNA polymerase IV n=1 Tax=Exiguobacterium sibiri... 285 2e-75 UniRef50_A0L3I2 DNA-directed DNA polymerase n=1 Tax=Shewanella s... 285 2e-75 UniRef50_A6DHJ1 Putative uncharacterized protein n=1 Tax=Lentisp... 285 3e-75 UniRef50_Q31HB8 ImpB/mucB/samB family protein n=1 Tax=Thiomicros... 285 3e-75 UniRef50_B9HS71 Predicted protein n=1 Tax=Populus trichocarpa Re... 284 4e-75 UniRef50_C6NU08 Error-prone repair protein UmuC n=1 Tax=Acidithi... 284 4e-75 UniRef50_A6GF38 DNA-directed DNA polymerase n=1 Tax=Plesiocystis... 284 5e-75 UniRef50_C7RFL5 DNA-directed DNA polymerase n=3 Tax=Anaerococcus... 283 6e-75 UniRef50_C7MN57 Nucleotidyltransferase/DNA polymerase involved i... 283 6e-75 UniRef50_A0K1P6 DNA-directed DNA polymerase n=7 Tax=Bacteria Rep... 283 6e-75 UniRef50_Q8UJK7 DNA polymerase IV 2 n=3 Tax=Bacteria RepID=DPO42... 283 6e-75 UniRef50_Q2KZS3 DNA polymerase IV n=2 Tax=Proteobacteria RepID=Q... 283 7e-75 UniRef50_Q2LU75 DNA polymerase IV n=1 Tax=Syntrophus aciditrophi... 283 9e-75 UniRef50_Q6AL48 DNA polymerase IV n=1 Tax=Desulfotalea psychroph... 283 9e-75 UniRef50_B2GJQ9 DNA polymerase IV n=1 Tax=Kocuria rhizophila DC2... 282 2e-74 UniRef50_Q8UFV3 DNA polymerase IV 1 n=118 Tax=Alphaproteobacteri... 282 2e-74 UniRef50_C8WRW0 DNA-directed DNA polymerase n=2 Tax=Alicyclobaci... 281 4e-74 UniRef50_C2BWE4 DNA-directed DNA polymerase n=1 Tax=Mobiluncus c... 280 5e-74 UniRef50_B0VP90 DNA polymerase IV, devoid of proofreading, damag... 280 5e-74 UniRef50_B3T119 Putative impB/mucB/samB family protein n=1 Tax=u... 280 6e-74 UniRef50_Q2S2C0 Putative DNA polymerase IV n=2 Tax=Bacteria RepI... 280 7e-74 UniRef50_B4WH69 ImpB/MucB/SamB family n=1 Tax=Synechococcus sp. ... 280 7e-74 UniRef50_C8WGA6 DNA-directed DNA polymerase n=3 Tax=Bacteria Rep... 280 7e-74 UniRef50_B0MAH2 Putative uncharacterized protein n=1 Tax=Anaeros... 280 8e-74 UniRef50_Q1QXW8 DNA-directed DNA polymerase n=1 Tax=Chromohaloba... 280 8e-74 UniRef50_Q04M21 DNA polymerase IV n=98 Tax=Bacilli RepID=DPO4_STRP2 280 8e-74 UniRef50_C6W6Q9 DNA-directed DNA polymerase n=3 Tax=Bacteroidete... 280 1e-73 UniRef50_A3VP13 DNA polymerase IV n=5 Tax=Alphaproteobacteria Re... 279 1e-73 UniRef50_B6WBQ9 Putative uncharacterized protein n=1 Tax=Anaeroc... 278 2e-73 UniRef50_Q38YP4 DNA-damage-inducible protein P n=30 Tax=Bacilli ... 278 3e-73 UniRef50_B9JVH1 DNA-damage inducible protein n=18 Tax=Alphaprote... 278 3e-73 UniRef50_C4F8L3 Putative uncharacterized protein n=2 Tax=Collins... 278 4e-73 UniRef50_Q72MY7 DNA polymerase IV n=18 Tax=Bacteria RepID=DPO4_L... 278 4e-73 UniRef50_Q654Y6 Os06g0691000 protein n=7 Tax=Poaceae RepID=Q654Y... 277 4e-73 UniRef50_Q2FKS4 DNA-directed DNA polymerase n=1 Tax=Methanospiri... 277 5e-73 UniRef50_C0LIJ7 Putative DNA polymerase V subunit UmuC n=1 Tax=A... 277 8e-73 UniRef50_A5Z8E0 Putative uncharacterized protein n=10 Tax=Clostr... 276 9e-73 UniRef50_B1KD33 DNA polymerase IV n=55 Tax=Proteobacteria RepID=... 276 1e-72 UniRef50_B3WC63 DNA-damage-inducible protein P n=8 Tax=Lactobaci... 276 1e-72 UniRef50_D2NU69 Nucleotidyltransferase/DNA polymerase involved i... 276 1e-72 UniRef50_C7H0B0 Putative DNA polymerase IV n=1 Tax=Eubacterium s... 275 2e-72 UniRef50_B9YDA2 Putative uncharacterized protein n=1 Tax=Holdema... 275 2e-72 UniRef50_UPI000050FCD1 DNA-directed DNA polymerase n=1 Tax=Brevi... 275 2e-72 UniRef50_A1WY69 DNA polymerase IV n=47 Tax=Bacteria RepID=DPO4_H... 275 3e-72 UniRef50_B3E013 Nucleotidyltransferase/DNA polymerase involved i... 275 3e-72 UniRef50_Q5WYY8 DNA polymerase IV n=64 Tax=Bacteria RepID=DPO4_L... 275 3e-72 UniRef50_A8RBK8 Putative uncharacterized protein n=2 Tax=unclass... 274 4e-72 UniRef50_D0LIK9 DNA-directed DNA polymerase n=1 Tax=Haliangium o... 274 5e-72 UniRef50_C5RD20 DNA-directed DNA polymerase n=1 Tax=Weissella pa... 274 5e-72 UniRef50_B0BPX9 DNA polymerase IV n=222 Tax=cellular organisms R... 273 8e-72 UniRef50_D2A3T9 Putative uncharacterized protein GLEAN_14950 n=1... 273 9e-72 UniRef50_Q2IM85 DNA-directed DNA polymerase n=7 Tax=Myxococcales... 273 1e-71 UniRef50_C2FXW7 Possible DNA-directed DNA polymerase n=2 Tax=Sph... 272 1e-71 UniRef50_A8YTI5 DNA-damage-inducible protein n=29 Tax=Lactobacil... 272 2e-71 UniRef50_A3EWL3 Polymerase ATREV1-1105 n=8 Tax=rosids RepID=A3EW... 271 3e-71 UniRef50_B2A4V8 DNA-directed DNA polymerase n=5 Tax=Clostridia R... 271 4e-71 UniRef50_B0TQD1 DNA polymerase IV n=7 Tax=Bacteria RepID=DPO4_SHEHH 271 4e-71 UniRef50_C5NXH9 DNA polymerase IV 1 n=1 Tax=Gemella haemolysans ... 271 4e-71 UniRef50_A1KUQ3 DNA polymerase IV n=34 Tax=Proteobacteria RepID=... 270 5e-71 UniRef50_B5Y6A2 DNA-directed DNA polymerase n=1 Tax=Coprothermob... 270 6e-71 UniRef50_C1F962 Putative DNA polymerase IV n=2 Tax=Bacteria RepI... 270 8e-71 UniRef50_UPI00016E76F4 UPI00016E76F4 related cluster n=1 Tax=Tak... 270 8e-71 UniRef50_Q2P7M9 DNA polymerase IV n=22 Tax=Proteobacteria RepID=... 270 9e-71 UniRef50_Q8VMP6 RuvB protein n=4 Tax=Pseudomonas RepID=Q8VMP6_PSEPU 270 1e-70 UniRef50_Q0KKM4 Putative UV protection protein n=1 Tax=Plasmid p... 269 1e-70 UniRef50_A4BJD8 DNA polymerase IV n=1 Tax=Reinekea blandensis ME... 269 1e-70 UniRef50_Q4ZWM4 DNA polymerase IV n=61 Tax=Bacteria RepID=DPO4_P... 269 1e-70 UniRef50_C5JS23 DNA damage repair protein Mus42 n=2 Tax=Ajellomy... 269 1e-70 UniRef50_C7RGQ0 DNA-directed DNA polymerase n=5 Tax=Anaerococcus... 269 2e-70 UniRef50_B5JKI6 ImpB/MucB/SamB family n=1 Tax=Verrucomicrobiae b... 268 2e-70 UniRef50_A9NFA5 DNA-damage repair protein n=5 Tax=Bacteria RepID... 268 2e-70 UniRef50_Q0FEJ5 DNA polymerase IV n=3 Tax=Rhodobacterales RepID=... 268 2e-70 UniRef50_A5G2F2 DNA-directed DNA polymerase n=1 Tax=Acidiphilium... 268 3e-70 UniRef50_A3M2E2 DNA-directed DNA polymerase n=8 Tax=Acinetobacte... 268 3e-70 UniRef50_B6J224 DNA polymerase IV n=5 Tax=Coxiella burnetii RepI... 267 5e-70 UniRef50_C8NZM9 DNA polymerase IV n=1 Tax=Erysipelothrix rhusiop... 267 6e-70 UniRef50_C4FTM8 Putative uncharacterized protein n=1 Tax=Catonel... 267 8e-70 UniRef50_C5CA41 DNA polymerase IV involved in DNA repair n=3 Tax... 266 9e-70 UniRef50_B1ZN03 DNA polymerase IV n=2 Tax=Opitutaceae RepID=DPO4... 266 1e-69 UniRef50_A8UAY3 ImpB/MucB/SamB family protein n=5 Tax=Bacilli Re... 266 1e-69 UniRef50_D1BPW6 UMUC domain protein DNA-repair protein n=2 Tax=V... 266 1e-69 UniRef50_A7I5X9 DNA-directed DNA polymerase n=1 Tax=Candidatus M... 266 1e-69 UniRef50_C2KZY4 DNA polymerase IV n=2 Tax=Clostridiales RepID=C2... 265 3e-69 UniRef50_B0S0R3 DNA polymerase IV n=4 Tax=Clostridiales RepID=B0... 264 4e-69 UniRef50_Q2L7B2 REV1 n=7 Tax=Sordariomycetes RepID=Q2L7B2_NEUCR 264 4e-69 UniRef50_C9M6E1 UmuC protein n=1 Tax=Jonquetella anthropi E3_33 ... 264 5e-69 UniRef50_B0TAW2 DNA polymerase iv n=1 Tax=Heliobacterium modesti... 264 5e-69 UniRef50_C7QBJ0 DNA-directed DNA polymerase n=3 Tax=Actinomyceta... 263 7e-69 UniRef50_C3Y6K1 Putative uncharacterized protein (Fragment) n=1 ... 263 7e-69 UniRef50_B0TZS5 DNA polymerase IV n=14 Tax=Francisella RepID=DPO... 263 8e-69 UniRef50_Q2LSC9 Nucleotidyltransferase/DNA polymerase protein n=... 263 9e-69 UniRef50_B7S1R7 ImpB/MucB/SamB family protein n=1 Tax=marine gam... 263 9e-69 UniRef50_Q0EYF1 Putative uncharacterized protein n=1 Tax=Maripro... 263 1e-68 UniRef50_Q2RNH1 DNA-directed DNA polymerase n=5 Tax=Alphaproteob... 263 1e-68 UniRef50_Q2SS65 ImpB/MucB/SamB family protein n=3 Tax=Mycoplasma... 263 1e-68 UniRef50_C8V695 Deoxycytidyl transferase (Eurofung) n=2 Tax=Emer... 262 1e-68 UniRef50_D1YPB9 Putative DNA polymerase IV n=1 Tax=Veillonella p... 261 2e-68 UniRef50_A2QTI4 Contig An09c0050, complete genome n=9 Tax=Euroti... 261 3e-68 UniRef50_C0S277 DNA polymerase IV n=5 Tax=Onygenales RepID=C0S27... 261 4e-68 UniRef50_D0NDK9 DNA repair protein REV1 n=1 Tax=Phytophthora inf... 261 4e-68 UniRef50_UPI0001C34BBE DNA-directed DNA polymerase n=3 Tax=Neiss... 261 4e-68 UniRef50_B2VS10 DNA polymerase IV n=3 Tax=Pleosporineae RepID=B2... 260 5e-68 UniRef50_Q46L62 DNA-directed DNA polymerase n=2 Tax=Prochlorococ... 260 6e-68 UniRef50_UPI000186DDA3 terminal deoxycytidyl transferase rev1, p... 260 8e-68 UniRef50_B8GPZ5 DNA-directed DNA polymerase n=2 Tax=Gammaproteob... 260 8e-68 UniRef50_B1MZW7 Nucleotidyltransferase/DNA polymerase involved i... 260 9e-68 UniRef50_B9XRF0 DNA polymerase III, alpha subunit n=1 Tax=bacter... 260 1e-67 UniRef50_Q9AK82 DNA polymerase IV n=34 Tax=Bacteria RepID=DPO4_S... 259 1e-67 UniRef50_B9X9L4 DNA-directed DNA polymerase n=3 Tax=Verrucomicro... 258 2e-67 UniRef50_B8M4C5 DNA-directed polymerase kappa, putative n=14 Tax... 258 3e-67 UniRef50_Q6MCK0 Putative SOS mutagenesis and repair protein UmuC... 258 4e-67 UniRef50_Q1N612 DNA polymerase IV n=1 Tax=Bermanella marisrubri ... 258 4e-67 UniRef50_B4MLB6 GK17515 n=1 Tax=Drosophila willistoni RepID=B4ML... 257 5e-67 UniRef50_D1C5S0 DNA-directed DNA polymerase n=1 Tax=Sphaerobacte... 257 5e-67 UniRef50_A0YE03 DNA polymerase IV n=2 Tax=Gammaproteobacteria Re... 257 7e-67 UniRef50_Q98JM5 DNA polymerase IV 2 n=4 Tax=Bacteria RepID=DPO42... 256 1e-66 UniRef50_C0ZB00 DNA polymerase IV n=1 Tax=Brevibacillus brevis N... 256 1e-66 UniRef50_A7E7M1 Putative uncharacterized protein n=2 Tax=Sclerot... 256 1e-66 UniRef50_B5TTR9 RumB n=6 Tax=Bacteria RepID=B5TTR9_9BACT 256 1e-66 UniRef50_C5BNY2 DNA polymerase IV n=1 Tax=Teredinibacter turnera... 256 1e-66 UniRef50_B1YIX5 DNA-directed DNA polymerase n=2 Tax=Exiguobacter... 255 2e-66 UniRef50_C7MBE5 Nucleotidyltransferase/DNA polymerase involved i... 255 2e-66 UniRef50_A3NBC4 DNA polymerase IV n=15 Tax=pseudomallei group Re... 255 2e-66 UniRef50_D1JEL0 DNA polymerase IV n=1 Tax=uncultured archaeon Re... 255 3e-66 UniRef50_D2R9L6 ImpB/MucB/SamB family protein n=1 Tax=Gardnerell... 255 3e-66 UniRef50_C5CJ42 DNA-directed DNA polymerase n=1 Tax=Kosmotoga ol... 255 3e-66 UniRef50_C3PHE2 DNA polymerase IV n=10 Tax=Corynebacterineae Rep... 255 3e-66 UniRef50_B1VHB3 DNA polymerase IV n=1 Tax=Corynebacterium urealy... 253 8e-66 UniRef50_Q29DW0 GA11465 n=3 Tax=Drosophila RepID=Q29DW0_DROPS 253 8e-66 UniRef50_Q9UBZ9 DNA repair protein REV1 n=27 Tax=Tetrapoda RepID... 253 9e-66 UniRef50_A6DIV6 DNA polymerase IV n=1 Tax=Lentisphaera araneosa ... 252 1e-65 UniRef50_C1I721 DNA-damage repair protein n=1 Tax=Clostridium sp... 252 1e-65 UniRef50_D2P394 DNA polymerase V n=7 Tax=Listeria RepID=D2P394_L... 252 2e-65 UniRef50_A7HFE4 DNA-directed DNA polymerase n=1 Tax=Anaeromyxoba... 251 2e-65 UniRef50_B6Q7Y5 DNA-directed polymerase kappa, putative n=2 Tax=... 251 3e-65 UniRef50_A9UNE7 GH11153p (Fragment) n=8 Tax=Drosophila RepID=A9U... 251 3e-65 UniRef50_Q7NAR2 UmuC/DinP-like n=1 Tax=Mycoplasma gallisepticum ... 251 3e-65 UniRef50_Q3II35 DNA polymerase IV n=3 Tax=Alteromonadales RepID=... 251 4e-65 UniRef50_A4VCZ3 DNA polymerase IV / kappa n=1 Tax=Tetrahymena th... 251 4e-65 UniRef50_B6K5W3 DNA polymerase kappa n=2 Tax=cellular organisms ... 251 4e-65 UniRef50_B7GNF3 Transcriptional regulator, Fis family n=9 Tax=Bi... 251 4e-65 UniRef50_A1A051 DNA-damage-inducible protein P n=10 Tax=Bifidoba... 251 5e-65 UniRef50_Q6F1D8 DNA polymerase IV (PolIV) n=1 Tax=Mesoplasma flo... 250 6e-65 UniRef50_D1HMR5 Whole genome shotgun sequence of line PN40024, s... 250 9e-65 UniRef50_Q2HFL9 Putative uncharacterized protein n=1 Tax=Chaetom... 250 1e-64 UniRef50_B6Q3Z2 DNA damage repair protein Mus42, putative n=5 Ta... 249 1e-64 UniRef50_Q03X78 Nucleotidyltransferase/DNA polymerase for DNA re... 249 2e-64 UniRef50_UPI0000D862D7 hypothetical protein CIMG_01093 n=1 Tax=C... 249 2e-64 UniRef50_B7QCT1 Terminal deoxycytidyl transferase rev1, putative... 248 2e-64 UniRef50_UPI000180C22E PREDICTED: similar to polymerase (DNA dir... 248 2e-64 UniRef50_A4QFK8 DNA polymerase IV n=28 Tax=Actinomycetales RepID... 248 3e-64 UniRef50_Q5Q9H0 Polymerase kappa isoform 9 n=3 Tax=Murinae RepID... 248 3e-64 UniRef50_Q8TIW3 DNA polymerase IV n=4 Tax=Methanosarcinaceae Rep... 247 5e-64 UniRef50_D2VFM3 Predicted protein n=1 Tax=Naegleria gruberi RepI... 247 5e-64 UniRef50_B2AY86 Predicted CDS Pa_1_10240 n=3 Tax=Sordariomycetes... 247 5e-64 UniRef50_B7CAT7 Putative uncharacterized protein n=2 Tax=Erysipe... 247 6e-64 UniRef50_A0QHM7 DNA polymerase IV 1 n=8 Tax=Corynebacterineae Re... 246 8e-64 UniRef50_C4G2M8 Putative uncharacterized protein n=1 Tax=Abiotro... 246 1e-63 UniRef50_B0D2Y9 Predicted protein n=3 Tax=Agaricales RepID=B0D2Y... 246 1e-63 UniRef50_O94623 DNA repair protein rev1 n=1 Tax=Schizosaccharomy... 246 1e-63 UniRef50_Q7Q6B2 AGAP005939-PA n=2 Tax=Culicidae RepID=Q7Q6B2_ANOGA 245 2e-63 UniRef50_A0D236 Chromosome undetermined scaffold_35, whole genom... 245 3e-63 UniRef50_A9V4K7 Predicted protein n=1 Tax=Monosiga brevicollis R... 245 3e-63 UniRef50_C2HDM1 Possible DNA-directed DNA polymerase n=83 Tax=Fi... 244 4e-63 UniRef50_UPI0001C32444 DNA-directed DNA polymerase n=1 Tax=Conex... 243 7e-63 UniRef50_C4LI62 DNA polymerase IV n=1 Tax=Corynebacterium kroppe... 243 8e-63 UniRef50_A4RF27 Putative uncharacterized protein n=1 Tax=Magnapo... 243 9e-63 UniRef50_Q47E66 UMUC-like DNA-repair protein n=2 Tax=Betaproteob... 243 9e-63 UniRef50_D2LRT2 DNA-directed DNA polymerase n=3 Tax=Bacillus Rep... 242 1e-62 UniRef50_UPI0001B7B957 DinB1 protein n=3 Tax=Euteleostomi RepID=... 242 2e-62 UniRef50_D1BHR1 Nucleotidyltransferase/DNA polymerase involved i... 241 4e-62 UniRef50_B9LT67 UMUC domain protein DNA-repair protein n=3 Tax=H... 241 5e-62 UniRef50_B0R4P0 DNA polymerase IV n=7 Tax=Halobacteriaceae RepID... 241 5e-62 UniRef50_O74944 DNA polymerase kappa n=1 Tax=Schizosaccharomyces... 240 8e-62 UniRef50_A6UXE7 Ultraviolet light resistance protein B n=1 Tax=P... 240 1e-61 UniRef50_C1A0W3 DNA polymerase IV n=9 Tax=Corynebacterineae RepI... 240 1e-61 UniRef50_C1A9Y5 DNA polymerase IV n=1 Tax=Gemmatimonas aurantiac... 239 1e-61 UniRef50_C7DHN7 DNA-directed DNA polymerase n=1 Tax=Candidatus M... 238 3e-61 UniRef50_A4RZX2 Predicted protein (Fragment) n=2 Tax=Ostreococcu... 238 4e-61 UniRef50_D1Y4D1 DNA polymerase IV n=1 Tax=Pyramidobacter piscole... 238 4e-61 UniRef50_Q03R40 Nucleotidyltransferase/DNA polymerase for DNA re... 237 6e-61 UniRef50_A9NFG9 DNA polymerase IV n=1 Tax=Acholeplasma laidlawii... 236 1e-60 UniRef50_Q4KWZ7 REV1 protein n=9 Tax=Euteleostomi RepID=Q4KWZ7_C... 236 1e-60 UniRef50_C6WX69 DNA-directed DNA polymerase n=1 Tax=Methylotener... 236 2e-60 UniRef50_D2R017 DNA-directed DNA polymerase n=2 Tax=Planctomycet... 236 2e-60 UniRef50_A2FMN4 ImpB/MucB/SamB family protein n=1 Tax=Trichomona... 235 2e-60 UniRef50_C8W7V4 UMUC domain protein DNA-repair protein n=12 Tax=... 235 2e-60 UniRef50_C1XFZ1 Nucleotidyltransferase/DNA polymerase involved i... 235 2e-60 UniRef50_A5IXL3 DNA damage repair protein MucB n=1 Tax=Mycoplasm... 235 2e-60 UniRef50_Q4S0P1 Chromosome 2 SCAF14781, whole genome shotgun seq... 235 3e-60 UniRef50_A0AM11 Complete genome n=24 Tax=Listeria RepID=A0AM11_L... 235 3e-60 UniRef50_C8WYD4 DNA-directed DNA polymerase n=4 Tax=Alicyclobaci... 234 5e-60 UniRef50_A1SN18 DNA-directed DNA polymerase n=13 Tax=Actinomycet... 234 6e-60 UniRef50_A8Z6F4 Umuc domain protein dna-repair protein n=2 Tax=C... 233 7e-60 UniRef50_D1WCN2 Nucleotidyltransferase/DNA polymerase for DNA re... 233 7e-60 UniRef50_C9AAQ9 DNA directed DNA polymerase n=4 Tax=Enterococcus... 233 8e-60 UniRef50_A9A3A9 DNA polymerase IV n=6 Tax=Thaumarchaeota RepID=D... 233 9e-60 UniRef50_C3WGR0 DNA polymerase IV n=6 Tax=Fusobacterium RepID=C3... 233 1e-59 UniRef50_A2DLM9 ImpB/MucB/SamB family protein n=1 Tax=Trichomona... 233 1e-59 UniRef50_A9BNM1 DNA-directed DNA polymerase n=34 Tax=Betaproteob... 233 1e-59 UniRef50_C4M8P4 Deoxycytidyl transferase, putative n=2 Tax=Entam... 232 2e-59 UniRef50_C4Z6F8 DNA polymerase V n=1 Tax=Eubacterium eligens ATC... 232 2e-59 UniRef50_Q5K8U2 Putative uncharacterized protein n=3 Tax=Agarico... 231 3e-59 UniRef50_C1XR91 Nucleotidyltransferase/DNA polymerase involved i... 231 4e-59 UniRef50_C1F7T1 ImpB/MucB/SamB family protein n=1 Tax=Acidobacte... 230 6e-59 UniRef50_A4S3F0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 230 8e-59 UniRef50_C4FT17 Putative uncharacterized protein n=3 Tax=Firmicu... 230 1e-58 UniRef50_C1DYT2 Predicted protein (Fragment) n=2 Tax=Micromonas ... 230 1e-58 UniRef50_C8WH43 UMUC domain protein DNA-repair protein n=3 Tax=B... 229 1e-58 UniRef50_A6C5Y5 UMUC-like DNA-repair protein n=1 Tax=Planctomyce... 229 1e-58 UniRef50_A5EBX2 DNA polymerase IV (Pol IV 3) n=2 Tax=Bradyrhizob... 229 2e-58 UniRef50_D1BPP8 UMUC domain protein DNA-repair protein n=3 Tax=V... 229 2e-58 UniRef50_B5BUV5 DNA polymerase kappa n=2 Tax=Agaricales RepID=B5... 228 3e-58 UniRef50_A8VWB3 DNA-directed DNA polymerase n=1 Tax=Bacillus sel... 228 4e-58 UniRef50_Q4Q8C4 DNA polymerase kappa, putative (Dna polymerase i... 228 4e-58 UniRef50_P63988 DNA polymerase IV 2 n=20 Tax=Corynebacterineae R... 227 6e-58 UniRef50_B6HNR2 Pc21g13870 protein n=17 Tax=Leotiomyceta RepID=B... 227 7e-58 UniRef50_B0UY97 Novel protein similar to vertebrate REV1 homolog... 226 9e-58 UniRef50_A6Q1N4 DNA polymerase IV n=1 Tax=Nitratiruptor sp. SB15... 226 9e-58 UniRef50_Q041Q9 Nucleotidyltransferase/DNA polymerase for DNA re... 226 1e-57 UniRef50_D1AVL7 DNA-directed DNA polymerase n=1 Tax=Streptobacil... 226 1e-57 UniRef50_Q4P422 Putative uncharacterized protein n=1 Tax=Ustilag... 226 1e-57 UniRef50_B0D0P7 Predicted protein n=1 Tax=Laccaria bicolor S238N... 225 2e-57 UniRef50_C5MCF2 Putative uncharacterized protein n=1 Tax=Candida... 225 2e-57 UniRef50_Q03AC9 Nucleotidyltransferase/DNA polymerase for DNA re... 225 3e-57 UniRef50_UPI00006A0370 DNA repair protein REV1 (EC 2.7.7.-) (Rev... 225 3e-57 UniRef50_A3GH67 DNA repair protein n=2 Tax=Pichia stipitis RepID... 225 4e-57 UniRef50_D2RTA3 DNA-directed DNA polymerase n=1 Tax=Haloterrigen... 224 4e-57 UniRef50_Q8REB0 DNA polymerase IV n=8 Tax=Fusobacterium RepID=DP... 224 7e-57 UniRef50_Q8RNE6 UmuC protein (Fragment) n=6 Tax=Proteobacteria R... 223 9e-57 UniRef50_Q09615 Protein ZK675.2, partially confirmed by transcri... 223 1e-56 UniRef50_C8PJM6 DNA polymerase IV n=1 Tax=Campylobacter gracilis... 222 2e-56 UniRef50_C4XEA8 Putative uncharacterized protein n=1 Tax=Mycopla... 222 2e-56 UniRef50_A5DN15 Putative uncharacterized protein n=2 Tax=Pichia ... 222 2e-56 UniRef50_Q1Q0T1 Putative uncharacterized protein n=1 Tax=Candida... 221 4e-56 UniRef50_B7P2Q3 DNA polymerase IV / kappa, putative n=1 Tax=Ixod... 221 4e-56 UniRef50_UPI0001745AF1 DNA-directed DNA polymerase n=1 Tax=Verru... 221 5e-56 UniRef50_B1AJ79 DNA polymerase IV n=15 Tax=Ureaplasma RepID=DPO4... 221 6e-56 UniRef50_C3AWZ9 DNA-damage repair protein n=3 Tax=Bacillus cereu... 220 6e-56 UniRef50_C4XZD9 Putative uncharacterized protein n=1 Tax=Clavisp... 220 6e-56 UniRef50_D2QRX3 DNA-directed DNA polymerase n=1 Tax=Spirosoma li... 220 7e-56 UniRef50_A8EUX3 DNA polymerase IV n=1 Tax=Arcobacter butzleri RM... 220 7e-56 UniRef50_Q6C2B9 YALI0F09141p n=1 Tax=Yarrowia lipolytica RepID=Q... 220 8e-56 UniRef50_C9RQ99 UMUC domain protein DNA-repair protein n=1 Tax=F... 220 9e-56 UniRef50_B3PM57 Pol_IV_kappa DNA polymerase n=1 Tax=Mycoplasma a... 219 1e-55 UniRef50_C7I020 DNA-directed DNA polymerase n=1 Tax=Thiomonas in... 219 1e-55 UniRef50_C4R1P8 Deoxycytidyl transferase, forms a complex with t... 219 2e-55 UniRef50_UPI0000DB6FEF PREDICTED: similar to DNApol- CG7602-PA, ... 219 2e-55 UniRef50_B8P0X5 Predicted protein (Fragment) n=1 Tax=Postia plac... 218 2e-55 UniRef50_Q0F3E1 ImpB/MucB/SamB family protein n=2 Tax=Mariprofun... 218 3e-55 UniRef50_Q4D5I0 DNA polymerase kappa, putative n=4 Tax=Trypanoso... 218 3e-55 UniRef50_C7N9E0 DNA-directed DNA polymerase n=5 Tax=Fusobacteria... 217 6e-55 UniRef50_B3RS03 Putative uncharacterized protein n=1 Tax=Trichop... 217 7e-55 UniRef50_A5E4H3 Putative uncharacterized protein n=1 Tax=Loddero... 217 7e-55 UniRef50_A6DEG1 DNA-directed DNA polymerase n=1 Tax=Caminibacter... 217 7e-55 UniRef50_Q9UNA4 DNA polymerase iota n=24 Tax=Chordata RepID=POLI... 217 8e-55 UniRef50_A8IAM0 DNA polymerase kappa (Fragment) n=1 Tax=Chlamydo... 216 8e-55 UniRef50_Q0FDK2 UMUC-like DNA-repair protein n=1 Tax=Rhodobacter... 216 8e-55 UniRef50_C2D8D4 Possible DNA-directed DNA polymerase n=1 Tax=Ato... 216 9e-55 UniRef50_A8PXZ2 Putative uncharacterized protein n=1 Tax=Malasse... 216 1e-54 UniRef50_UPI0000167505 COG0389: Nucleotidyltransferase/DNA polym... 216 1e-54 UniRef50_UPI0000F2F527 DNA-directed DNA polymerase n=1 Tax=Acine... 216 1e-54 UniRef50_A6QA22 DNA polymerase IV n=1 Tax=Sulfurovum sp. NBC37-1... 215 2e-54 UniRef50_UPI00017B5397 UPI00017B5397 related cluster n=1 Tax=Tet... 215 2e-54 UniRef50_Q2BYP9 Nucleotidyltransferase/DNA polymerase involved i... 215 2e-54 UniRef50_Q568P0 Zgc:110185 n=3 Tax=Clupeocephala RepID=Q568P0_DANRE 215 3e-54 UniRef50_B7AW77 Putative uncharacterized protein n=3 Tax=Bacteri... 214 4e-54 UniRef50_D0A851 DNA polymerase kappa, putative n=17 Tax=Trypanos... 214 5e-54 UniRef50_B4WAK0 ImpB/MucB/SamB family n=1 Tax=Brevundimonas sp. ... 214 7e-54 UniRef50_A3ZXX8 ImpB/MucB/SamB family protein n=2 Tax=Planctomyc... 213 8e-54 UniRef50_Q5QZ82 DinP n=2 Tax=Idiomarina RepID=Q5QZ82_IDILO 213 9e-54 UniRef50_B5X367 DNA polymerase iota n=1 Tax=Salmo salar RepID=B5... 213 9e-54 UniRef50_C5SGU5 DNA-directed DNA polymerase n=1 Tax=Asticcacauli... 213 1e-53 UniRef50_D0L509 DNA-directed DNA polymerase n=2 Tax=Corynebacter... 213 1e-53 UniRef50_C4Q7Z3 Terminal deoxycytidyl transferase rev1, putative... 213 1e-53 UniRef50_B6K5D4 DNA polymerase IV n=1 Tax=Schizosaccharomyces ja... 212 2e-53 UniRef50_B9DUB9 ImpB/mucB/samB family n=26 Tax=root RepID=B9DUB9... 211 4e-53 UniRef50_Q0IJ37 DNA polymerase iota n=5 Tax=Eukaryota RepID=Q0IJ... 211 4e-53 UniRef50_C1E418 Predicted protein (Fragment) n=2 Tax=Micromonas ... 211 5e-53 UniRef50_B9L8S0 DNA-directed DNA polymerase n=1 Tax=Nautilia pro... 209 1e-52 UniRef50_B9WGP7 DNA repair protein, putative (Deoxycytidyl trans... 209 2e-52 UniRef50_C3DVJ9 DNA-damage repair protein n=5 Tax=Bacillus RepID... 209 2e-52 UniRef50_D1J7R2 DNA-damage repair protein MucB n=1 Tax=Mycoplasm... 208 2e-52 UniRef50_D2JWS9 Putative DNA-directed polymerase kappa n=1 Tax=F... 208 2e-52 UniRef50_B7GAF1 Predicted protein n=1 Tax=Phaeodactylum tricornu... 208 3e-52 UniRef50_UPI0000D5778B PREDICTED: similar to DNA polymerase eta ... 208 3e-52 UniRef50_B3RQD9 Putative uncharacterized protein n=1 Tax=Trichop... 207 7e-52 UniRef50_A8PB46 ImpB/MucB/SamB family protein n=1 Tax=Brugia mal... 207 8e-52 UniRef50_Q5JLR9 Os01g0757800 protein n=3 Tax=Oryza sativa Japoni... 206 1e-51 UniRef50_A6X194 DNA-directed DNA polymerase n=5 Tax=Alphaproteob... 206 2e-51 UniRef50_Q30PG7 DNA-directed DNA polymerase n=2 Tax=Campylobacte... 204 4e-51 UniRef50_UPI0000E48503 PREDICTED: hypothetical protein n=1 Tax=S... 204 4e-51 UniRef50_P75241 Uncharacterized protein MG360 homolog n=3 Tax=My... 204 4e-51 UniRef50_A0LGS2 DNA-directed DNA polymerase n=1 Tax=Syntrophobac... 204 6e-51 UniRef50_UPI0000DB76DA PREDICTED: similar to Rev1 CG12189-PA n=1... 204 7e-51 UniRef50_D2BP58 ImpB/MucB/SamB family protein n=7 Tax=Firmicutes... 203 7e-51 UniRef50_D1I1G6 Whole genome shotgun sequence of line PN40024, s... 203 8e-51 UniRef50_A7SBP1 Predicted protein (Fragment) n=1 Tax=Nematostell... 203 1e-50 UniRef50_Q98R22 DNA-DAMAGE REPAIR PROTEIN MUCB n=1 Tax=Mycoplasm... 203 1e-50 UniRef50_A0RN38 DNA polymerase IV 1, putative n=1 Tax=Campylobac... 203 1e-50 UniRef50_Q6BS95 DEHA2D10560p n=2 Tax=Debaryomyces hansenii RepID... 203 1e-50 UniRef50_B8BXL1 REV1 protein n=1 Tax=Thalassiosira pseudonana Re... 203 1e-50 UniRef50_A8IYH8 Deoxycytidyl transferase n=1 Tax=Chlamydomonas r... 203 2e-50 UniRef50_C5DG10 KLTH0D01518p n=1 Tax=Lachancea thermotolerans CB... 201 3e-50 UniRef50_A4HGJ3 DNA polymerase kappa, putative n=4 Tax=Trypanoso... 201 4e-50 UniRef50_C5KD43 DNA polymerase IV, putative n=3 Tax=Perkinsus ma... 201 5e-50 UniRef50_A9KJA2 UMUC domain protein DNA-repair protein n=25 Tax=... 201 6e-50 UniRef50_Q8EWQ4 DNA-damage repair protein MucB n=1 Tax=Mycoplasm... 200 9e-50 UniRef50_A3TNV0 Putative uncharacterized protein n=1 Tax=Janibac... 199 1e-49 UniRef50_A4YEC1 DNA polymerase IV n=18 Tax=Sulfolobaceae RepID=D... 199 2e-49 UniRef50_Q6KI15 DNA-damage repair protein n=1 Tax=Mycoplasma mob... 199 2e-49 UniRef50_Q6CIW8 KLLA0F23375p n=1 Tax=Kluyveromyces lactis RepID=... 198 3e-49 UniRef50_B3QD61 DNA-directed DNA polymerase n=6 Tax=cellular org... 198 4e-49 UniRef50_A5BB36 Putative uncharacterized protein n=1 Tax=Vitis v... 198 4e-49 UniRef50_B3RPL1 Putative uncharacterized protein (Fragment) n=1 ... 196 1e-48 UniRef50_C9KLN2 UV-damage repair protein n=1 Tax=Mitsuokella mul... 195 2e-48 UniRef50_B5J6A6 ImpB/MucB/SamB family n=1 Tax=Octadecabacter ant... 195 2e-48 UniRef50_P34409 DNA polymerase kappa n=6 Tax=Chromadorea RepID=P... 195 2e-48 UniRef50_B7LX10 Protein impB n=4 Tax=Enterobacteriaceae RepID=B7... 195 3e-48 UniRef50_A9UXX3 Predicted protein (Fragment) n=2 Tax=Eukaryota R... 194 5e-48 UniRef50_C5DV83 ZYRO0D04664p n=1 Tax=Zygosaccharomyces rouxii Re... 194 6e-48 UniRef50_O48586 DNA-damage-inducible protein P n=6 Tax=Embryophy... 193 8e-48 UniRef50_Q6KZW2 DNA polymerase IV n=1 Tax=Picrophilus torridus R... 193 8e-48 UniRef50_Q4PCE3 Putative uncharacterized protein n=1 Tax=Ustilag... 193 1e-47 UniRef50_D1R481 Putative uncharacterized protein n=1 Tax=Parachl... 193 2e-47 UniRef50_Q7NUT5 UmuC protein n=1 Tax=Chromobacterium violaceum R... 193 2e-47 UniRef50_A8ND78 ImpB/MucB/SamB family protein n=1 Tax=Brugia mal... 192 2e-47 UniRef50_A8ZS28 DNA-directed DNA polymerase n=1 Tax=Desulfococcu... 191 4e-47 UniRef50_Q5Q9H1 Polymerase kappa isoform 8 n=14 Tax=Eumetazoa Re... 190 8e-47 UniRef50_C6HJM8 DNA damage repair protein Mus42 n=1 Tax=Ajellomy... 190 9e-47 UniRef50_UPI00017E10E6 DNA-directed DNA polymerase eta n=2 Tax=A... 189 1e-46 UniRef50_P12689 DNA repair protein REV1 n=7 Tax=Saccharomyces ce... 189 2e-46 UniRef50_UPI0000D56959 PREDICTED: similar to DNA polymerase iota... 189 2e-46 UniRef50_B7FT83 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 188 2e-46 UniRef50_B8C7E7 Predicted protein (Fragment) n=1 Tax=Thalassiosi... 188 3e-46 UniRef50_Q7QBI8 AGAP003157-PA (Fragment) n=3 Tax=Culicidae RepID... 187 6e-46 UniRef50_C0WCL1 DNA-repair protein n=1 Tax=Acidaminococcus sp. D... 187 8e-46 UniRef50_UPI000180D06B PREDICTED: similar to GH15415 n=1 Tax=Cio... 185 2e-45 UniRef50_Q9VHV1 DNApol-iota, isoform A n=12 Tax=Drosophila RepID... 185 2e-45 UniRef50_O17219 Polh (Dna polymerase eta) homolog protein 1, con... 184 7e-45 UniRef50_D2RJB9 UMUC domain protein DNA-repair protein n=4 Tax=B... 183 9e-45 UniRef50_B9KDE6 UV damage repair protein, ImpB/MucB/SamB family ... 183 9e-45 UniRef50_C2KWD3 ImpB/MucB/SamB family DNA-damage repair protein ... 183 9e-45 UniRef50_B8NVT6 DNA-directed polymerase kappa, putative n=1 Tax=... 183 1e-44 UniRef50_A8PR16 Putative uncharacterized protein n=1 Tax=Malasse... 183 1e-44 UniRef50_Q3A3S4 Nucleotidyltransferase/DNA polymerase n=1 Tax=Pe... 183 2e-44 UniRef50_Q9UBT6 DNA polymerase kappa n=23 Tax=Tetrapoda RepID=PO... 182 2e-44 UniRef50_C6DZL5 DNA-directed DNA polymerase n=3 Tax=Geobacter Re... 182 2e-44 UniRef50_UPI0000397F7C COG0389: Nucleotidyltransferase/DNA polym... 182 3e-44 UniRef50_Q4AAV0 DNA polymerase IV n=5 Tax=Mycoplasma hyopneumoni... 181 4e-44 UniRef50_C2JSZ5 Possible DNA-directed DNA polymerase (Fragment) ... 181 5e-44 UniRef50_A8BDY9 DINP protein human, muc B family n=2 Tax=Giardia... 180 7e-44 UniRef50_UPI000180C75E PREDICTED: similar to polymerase (DNA dir... 180 9e-44 UniRef50_Q54KS3 UMUC-like DNA-repair protein n=1 Tax=Dictyosteli... 180 1e-43 UniRef50_C9SBX6 DNA polymerase IV n=1 Tax=Verticillium albo-atru... 180 1e-43 UniRef50_C3ZXE4 Putative uncharacterized protein (Fragment) n=1 ... 179 1e-43 UniRef50_UPI0001792F1F PREDICTED: similar to polymerase (DNA dir... 179 1e-43 UniRef50_A7TRR0 Putative uncharacterized protein n=1 Tax=Vanderw... 179 2e-43 UniRef50_C2EU55 UMUC domain protein DNA-repair protein n=3 Tax=L... 178 2e-43 UniRef50_B7GU73 UMUC domain protein DNA-repair protein n=32 Tax=... 178 3e-43 UniRef50_A4E7R3 Putative uncharacterized protein n=2 Tax=Collins... 178 4e-43 UniRef50_D0MYB5 DNA polymerase kappa, putative n=1 Tax=Phytophth... 178 5e-43 UniRef50_Q759A8 ADR369Cp n=1 Tax=Eremothecium gossypii RepID=Q75... 177 7e-43 UniRef50_Q4A688 DNA polymerase IV n=2 Tax=Mycoplasma synoviae 53... 176 1e-42 UniRef50_D0SQN6 Predicted protein n=1 Tax=Acinetobacter junii SH... 176 1e-42 UniRef50_C6VKK8 UV-damage repair protein n=17 Tax=Bacteria RepID... 176 2e-42 UniRef50_D2VGP4 Predicted protein n=1 Tax=Naegleria gruberi RepI... 175 2e-42 UniRef50_Q6FV13 Similar to uniprot|P12689 Saccharomyces cerevisi... 175 3e-42 UniRef50_Q17IT1 Terminal deoxycytidyl transferase rev1 n=1 Tax=A... 174 4e-42 UniRef50_C5J784 DNA polymerase IV n=1 Tax=Mycoplasma conjunctiva... 174 6e-42 UniRef50_C2KQG7 ImpB/MucB/SamB family DNA-damage repair protein ... 173 9e-42 UniRef50_A0DAQ7 Chromosome undetermined scaffold_43, whole genom... 173 1e-41 UniRef50_Q1RLS3 Zgc:136881 n=6 Tax=Clupeocephala RepID=Q1RLS3_DANRE 173 1e-41 UniRef50_O48585 Similarity to DNA-damage-inducible protein P n=2... 172 2e-41 UniRef50_B4H4B7 GL20704 n=1 Tax=Drosophila persimilis RepID=B4H4... 170 7e-41 UniRef50_D0NYK2 Putative uncharacterized protein n=1 Tax=Phytoph... 169 2e-40 UniRef50_Q6R286 SOS inducible DNA polymerase (Fragment) n=15 Tax... 169 2e-40 UniRef50_UPI000038E47A DNA polymerase IV n=1 Tax=Ferroplasma aci... 168 3e-40 UniRef50_Q4DBR5 DNA damage repair protein, putative n=4 Tax=Tryp... 167 6e-40 UniRef50_B4QLD4 GD13564 n=1 Tax=Drosophila simulans RepID=B4QLD4... 167 7e-40 UniRef50_B2VTY6 Sister chromatid cohesion protein Eso1 n=8 Tax=L... 167 7e-40 UniRef50_A4HNL7 DNA damage repair protein, putative n=3 Tax=Leis... 167 1e-39 UniRef50_UPI0001850634 polymerase (DNA directed) iota n=1 Tax=Na... 166 1e-39 UniRef50_B9SQ81 DNA polymerase eta, putative n=1 Tax=Ricinus com... 166 2e-39 UniRef50_B2I405 Nucleotidyltransferase/DNA polymerase involved i... 165 2e-39 UniRef50_A7AX68 ImpB/MucB/SamB family protein n=1 Tax=Babesia bo... 164 4e-39 UniRef50_C5LMV6 Dna polymerase eta, putative n=1 Tax=Perkinsus m... 164 7e-39 UniRef50_A4EK23 DNA polymerase IV-AMBIGUITY n=3 Tax=Rhodobactera... 162 2e-38 UniRef50_Q828V5 Putative uncharacterized protein n=3 Tax=Strepto... 162 2e-38 UniRef50_UPI000192707B PREDICTED: similar to predicted protein, ... 161 4e-38 UniRef50_B6VBS6 Putative uncharacterized protein n=1 Tax=Caenorh... 159 2e-37 UniRef50_C4Q962 Rab geranylgeranyl transferase alpha subunit, pu... 158 3e-37 UniRef50_B7QI10 DNA polymerase eta, putative n=2 Tax=Ixodes scap... 158 4e-37 UniRef50_A7I053 DNA-directed DNA polymerase n=1 Tax=Campylobacte... 158 4e-37 UniRef50_D1BE66 Nucleotidyltransferase/DNA polymerase involved i... 157 6e-37 UniRef50_C3RLA4 DNA polymerase IV n=4 Tax=Bacteria RepID=C3RLA4_... 157 1e-36 UniRef50_B4VAW5 Putative uncharacterized protein n=1 Tax=Strepto... 156 1e-36 UniRef50_C6VUA5 Nucleotidyltransferase/DNA polymerase involved i... 156 1e-36 UniRef50_Q4SL60 Chromosome 17 SCAF14563, whole genome shotgun se... 156 2e-36 UniRef50_A9SDY0 Predicted protein n=1 Tax=Physcomitrella patens ... 155 3e-36 UniRef50_A8JCD8 DNA polymerase eta/iota n=1 Tax=Chlamydomonas re... 155 4e-36 UniRef50_Q3SQD1 DNA-directed DNA polymerase n=14 Tax=Bradyrhizob... 154 5e-36 UniRef50_Q5Q9G7 Polymerase kappa isoform 2 n=34 Tax=Deuterostomi... 154 6e-36 UniRef50_C1SJI9 Nucleotidyltransferase/DNA polymerase involved i... 154 6e-36 UniRef50_A8LY61 UMUC domain protein DNA-repair protein n=24 Tax=... 153 9e-36 UniRef50_B9Q7A7 Terminal deoxycytidyl transferase rev1, putative... 153 1e-35 UniRef50_C4ZE13 DNA-directed DNA polymerase n=1 Tax=Eubacterium ... 152 3e-35 UniRef50_A7HW56 Nucleotidyltransferase/DNA polymerase n=1 Tax=Pa... 151 3e-35 UniRef50_D1C5S3 DNA-directed DNA polymerase n=1 Tax=Sphaerobacte... 151 5e-35 UniRef50_A5VH01 Nucleotidyltransferase/DNA polymerase involved i... 151 5e-35 UniRef50_Q9Y253 DNA polymerase eta n=14 Tax=Amniota RepID=POLH_H... 150 8e-35 UniRef50_A4I3M2 DNA polymerase kappa, putative n=2 Tax=Leishmani... 150 9e-35 UniRef50_D0CTA7 Nucleotidyltransferase/DNA polymerase involved i... 150 1e-34 UniRef50_A0NRW5 Putative uncharacterized protein n=1 Tax=Labrenz... 149 2e-34 UniRef50_B0NK47 Putative uncharacterized protein n=1 Tax=Clostri... 149 3e-34 UniRef50_Q0G3S1 Putative uncharacterized protein n=1 Tax=Fulvima... 148 3e-34 UniRef50_B9KR94 DNA repair enzyme n=4 Tax=Rhodobacter sphaeroide... 148 3e-34 UniRef50_A3VTP3 ImpB/MucB/SamB family protein n=1 Tax=Parvularcu... 148 4e-34 UniRef50_D1WSU8 DNA-directed DNA polymerase n=3 Tax=Streptomyces... 148 4e-34 UniRef50_UPI0001B4E7CA hypothetical protein SvirD4_08371 n=2 Tax... 147 5e-34 UniRef50_B2ABI5 Predicted CDS Pa_1_20790 n=4 Tax=Sordariomycetes... 147 5e-34 UniRef50_B6BEE1 Nucleotidyltransferase/DNA polymerase involved i... 147 6e-34 UniRef50_B5H9Q9 Putative uncharacterized protein n=1 Tax=Strepto... 147 7e-34 UniRef50_O42917 N-acetyltransferase eso1 n=1 Tax=Schizosaccharom... 147 7e-34 UniRef50_A4S4R4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 146 1e-33 UniRef50_B9JES9 Nucleotidyltransferase protein n=14 Tax=Rhizobia... 146 2e-33 UniRef50_A9H958 Putative uncharacterized protein n=3 Tax=Alphapr... 146 2e-33 UniRef50_Q6DCL9 Polh-prov protein n=4 Tax=Tetrapoda RepID=Q6DCL9... 146 2e-33 UniRef50_C8XBY5 UMUC domain protein DNA-repair protein n=23 Tax=... 145 2e-33 UniRef50_A4RZL9 Predicted protein n=1 Tax=Ostreococcus lucimarin... 145 3e-33 UniRef50_C6XYX1 Cytosolic protein n=4 Tax=Sphingobacteriales Rep... 144 4e-33 UniRef50_UPI0001926C03 PREDICTED: similar to polymerase (DNA dir... 144 5e-33 UniRef50_C7DDU4 Nucleotidyltransferase/DNA polymerase involved i... 143 1e-32 UniRef50_C4VB58 Putative uncharacterized protein n=1 Tax=Nosema ... 142 2e-32 UniRef50_B2AJW9 Putative DNA polymerase, Y family n=8 Tax=Burkho... 142 2e-32 UniRef50_Q99QR3 Putative uncharacterized protein SCP1.321 n=4 Ta... 142 3e-32 UniRef50_B7FW32 Predicted protein n=1 Tax=Phaeodactylum tricornu... 141 3e-32 UniRef50_B1LUJ0 Putative uncharacterized protein n=1 Tax=Methylo... 141 4e-32 UniRef50_C0SPA8 DNA repair protein homolog yobH n=15 Tax=root Re... 141 4e-32 UniRef50_A2QJ22 Contig An04c0170, complete genome n=2 Tax=Asperg... 141 4e-32 UniRef50_A5V5C0 Nucleotidyltransferase/DNA polymerase involved i... 141 4e-32 UniRef50_Q2TTW3 UmuC n=8 Tax=Enterobacteriaceae RepID=Q2TTW3_ECOLX 141 5e-32 UniRef50_C8VB00 DNA polymerase eta (Eurofung) n=19 Tax=Eurotiomy... 141 7e-32 UniRef50_A4XTN1 Nucleotidyltransferase/DNA polymerase involved i... 140 8e-32 UniRef50_B2T2I7 Putative uncharacterized protein n=3 Tax=Burkhol... 140 1e-31 UniRef50_D1SIT0 Nucleotidyltransferase/DNA polymerase involved i... 140 1e-31 UniRef50_D1UT44 Putative uncharacterized protein n=1 Tax=Burkhol... 139 1e-31 UniRef50_A0LTK7 Putative uncharacterized protein n=1 Tax=Acidoth... 139 2e-31 UniRef50_B5HS70 Putative uncharacterized protein n=1 Tax=Strepto... 138 4e-31 UniRef50_A1BA10 Putative uncharacterized protein n=6 Tax=Rhodoba... 138 4e-31 UniRef50_A1SHX1 Putative DNA-directed DNA polymerase n=1 Tax=Noc... 138 5e-31 UniRef50_B6K7S5 Sister chromatid cohesion protein Eso1 n=1 Tax=S... 138 5e-31 UniRef50_D2Q395 Nucleotidyltransferase/DNA polymerase-like prote... 137 5e-31 UniRef50_B2I406 Nucleotidyltransferase/DNA polymerase involved i... 137 7e-31 UniRef50_C0WP28 Possible DNA-directed DNA polymerase n=3 Tax=Lac... 135 2e-30 UniRef50_Q1N9P2 Putative uncharacterized protein n=1 Tax=Sphingo... 135 3e-30 UniRef50_Q47EP4 Putative uncharacterized protein n=1 Tax=Dechlor... 135 3e-30 UniRef50_B8H428 Protein imuB n=6 Tax=Alphaproteobacteria RepID=I... 135 3e-30 UniRef50_A9CXS2 Putative nucleotidyltransferase protein n=1 Tax=... 135 3e-30 UniRef50_B8K9K1 Nucleotidyltransferase/DNA polymerase involved i... 135 4e-30 UniRef50_C1E586 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 134 6e-30 UniRef50_B4DB63 Nucleotidyltransferase/DNA polymerase involved i... 134 8e-30 UniRef50_UPI00019063AA putative nucleotidyltransferase protein n... 133 9e-30 UniRef50_Q1LFT0 Putative uncharacterized protein n=1 Tax=Cupriav... 133 9e-30 UniRef50_C4Q445 DNA polymerase eta, putative n=3 Tax=Schistosoma... 133 1e-29 UniRef50_C6XNZ3 Putative uncharacterized protein n=1 Tax=Hirschi... 133 1e-29 UniRef50_Q0ANL5 Putative uncharacterized protein n=1 Tax=Maricau... 133 1e-29 UniRef50_B8KMW0 Putative aspartate decarboxylase n=2 Tax=gamma p... 132 2e-29 UniRef50_A3JJR9 DinP DNA polymerase-like protein n=3 Tax=Marinob... 131 5e-29 UniRef50_C8VFX8 DNA polymerase iota, putative (AFU_orthologue; A... 131 6e-29 UniRef50_Q2Y5T6 Putative uncharacterized protein n=1 Tax=Nitroso... 130 8e-29 UniRef50_C4DV05 Nucleotidyltransferase/DNA polymerase involved i... 130 8e-29 UniRef50_Q9GNC0 DNA polymerase eta n=10 Tax=Drosophila RepID=Q9G... 130 1e-28 UniRef50_B4S261 Nucleotidyltransferase/DNA polymerase involved i... 130 1e-28 UniRef50_Q2W2X2 Nucleotidyltransferase/DNA polymerase involved i... 130 1e-28 UniRef50_C1F5L8 Putative uncharacterized protein n=2 Tax=Acidoba... 130 1e-28 UniRef50_B7S067 Putative uncharacterized protein n=1 Tax=marine ... 129 2e-28 UniRef50_A4AA43 Putative uncharacterized protein n=1 Tax=Congreg... 129 2e-28 UniRef50_B1VF25 Putative DNA polymerase involved in DNA repair n... 129 2e-28 UniRef50_A9IPJ8 Putative uncharacterized protein n=4 Tax=Bordete... 129 2e-28 UniRef50_B3R9B4 Required for the error-prone processing of DNA l... 129 3e-28 UniRef50_Q2SJZ5 Nucleotidyltransferase/DNA polymerase involved i... 128 4e-28 UniRef50_B9NI90 Predicted protein n=36 Tax=cellular organisms Re... 127 5e-28 UniRef50_C1EEZ5 Predicted protein (Fragment) n=1 Tax=Micromonas ... 127 5e-28 UniRef50_D1X5H2 DNA-directed DNA polymerase n=1 Tax=Streptomyces... 127 6e-28 UniRef50_D2LKT9 Nucleotidyltransferase/DNA polymerase involved i... 127 6e-28 UniRef50_UPI0001745839 nucleotidyltransferase/DNA polymerase inv... 127 7e-28 UniRef50_D0XS46 Nucleotidyltransferase/DNA polymerase involved i... 127 7e-28 UniRef50_UPI0000D878BE hypothetical protein CIMG_06713 n=1 Tax=C... 127 7e-28 UniRef50_A0Z5A6 Aspartate decarboxylase n=1 Tax=marine gamma pro... 127 7e-28 UniRef50_Q38C71 DNA polymerase eta, putative n=4 Tax=Trypanosoma... 127 8e-28 UniRef50_C7YPE8 Putative uncharacterized protein n=2 Tax=Nectria... 127 8e-28 UniRef50_A4JFF8 Putative uncharacterized protein n=2 Tax=Burkhol... 127 8e-28 UniRef50_C8NM76 Polymerase involved in DNA repair n=15 Tax=Coryn... 127 1e-27 UniRef50_A7BC74 Putative uncharacterized protein n=1 Tax=Actinom... 127 1e-27 UniRef50_C0G3K2 Cytoplasmic protein n=39 Tax=Rhizobiales RepID=C... 126 2e-27 UniRef50_Q0V979 Zgc:136881 n=6 Tax=Eumetazoa RepID=Q0V979_DANRE 126 2e-27 UniRef50_C6QBZ4 Putative uncharacterized protein n=1 Tax=Hyphomi... 126 2e-27 UniRef50_C7CFB9 Putative DNA-directed DNA polymerase n=1 Tax=Met... 125 4e-27 UniRef50_A4AKV5 Putative uncharacterized protein n=1 Tax=marine ... 125 4e-27 UniRef50_B6R5I9 Protein ImuB n=1 Tax=Pseudovibrio sp. JE062 RepI... 125 4e-27 UniRef50_D2DXS2 Nucleotidyltransferase/DNA polymerase n=1 Tax=un... 125 4e-27 UniRef50_UPI0001AEC5B6 Nucleotidyltransferase/DNA polymerase inv... 124 5e-27 UniRef50_Q5QUT8 Homolog of DinP DNA polymerase involved in DNA r... 124 5e-27 UniRef50_B1ZZZ2 Nucleotidyltransferase/DNA polymerase involved i... 124 5e-27 UniRef50_D2LC32 Putative uncharacterized protein n=1 Tax=Rhodomi... 124 8e-27 UniRef50_B6HVX2 Pc22g06410 protein n=8 Tax=Trichocomaceae RepID=... 124 8e-27 UniRef50_Q0BZD3 Putative uncharacterized protein n=1 Tax=Hyphomo... 124 8e-27 UniRef50_D0LTL3 Nucleotidyltransferase/DNA polymerase involved i... 124 9e-27 UniRef50_A9AEV1 Nucleotidyltransferase/DNA polymerase n=45 Tax=c... 123 1e-26 UniRef50_B0W8N7 DNA polymerase eta n=1 Tax=Culex quinquefasciatu... 123 1e-26 UniRef50_A2WV83 Putative uncharacterized protein n=1 Tax=Oryza s... 123 1e-26 UniRef50_A5FTH4 Nucleotidyltransferase/DNA polymerase involved i... 122 2e-26 UniRef50_B7ANI6 Putative uncharacterized protein n=1 Tax=Bactero... 122 2e-26 UniRef50_A0YAE9 Putative uncharacterized protein n=1 Tax=marine ... 122 2e-26 UniRef50_B9QVQ0 Putative uncharacterized protein n=1 Tax=Labrenz... 122 3e-26 UniRef50_B5GWK1 Putative uncharacterized protein n=1 Tax=Strepto... 122 4e-26 UniRef50_Q2NAX5 Putative uncharacterized protein n=3 Tax=Erythro... 121 4e-26 UniRef50_A4TZ00 UmuC protein n=1 Tax=Magnetospirillum gryphiswal... 121 4e-26 UniRef50_C4LH03 Putative DNA polymerase involved in DNA repair n... 121 4e-26 UniRef50_Q7MLY1 Uncharacterized protein conserved in bacteria n=... 121 7e-26 UniRef50_B8ELP7 Putative uncharacterized protein n=1 Tax=Methylo... 121 8e-26 UniRef50_UPI0001874386 polymerase involved in DNA repair n=1 Tax... 120 9e-26 UniRef50_Q92ZK0 Putative uncharacterized protein n=1 Tax=Sinorhi... 120 9e-26 UniRef50_Q1IJA4 Nucleotidyltransferase/DNA polymerase involved i... 120 1e-25 UniRef50_C5BVF2 DNA-repair protein n=2 Tax=Micrococcineae RepID=... 120 1e-25 UniRef50_D1BHX8 Nucleotidyltransferase/DNA polymerase involved i... 120 1e-25 UniRef50_B7ZA36 cDNA, FLJ79050, highly similar to DNA polymerase... 120 1e-25 UniRef50_D1ZXB0 C-terminus not complete (Fragment) n=1 Tax=Sorda... 119 2e-25 UniRef50_A2SG06 Putative uncharacterized protein n=2 Tax=Burkhol... 119 3e-25 UniRef50_C7MCU6 Nucleotidyltransferase/DNA polymerase involved i... 119 3e-25 UniRef50_B4SMM0 Nucleotidyltransferase/DNA polymerase involved i... 118 4e-25 UniRef50_C0W385 DNA-repair protein n=1 Tax=Actinomyces urogenita... 118 4e-25 UniRef50_C9SHT7 DNA polymerase IV n=1 Tax=Verticillium albo-atru... 117 6e-25 UniRef50_Q1N4J7 Putative uncharacterized protein n=1 Tax=Bermane... 117 6e-25 UniRef50_UPI00003828C5 COG0389: Nucleotidyltransferase/DNA polym... 117 6e-25 UniRef50_C4JRK3 Putative uncharacterized protein n=3 Tax=Onygena... 117 8e-25 UniRef50_C7Q6R5 Putative uncharacterized protein n=1 Tax=Catenul... 117 9e-25 UniRef50_D0LH57 Putative uncharacterized protein n=1 Tax=Haliang... 115 3e-24 UniRef50_A8N619 Putative uncharacterized protein n=1 Tax=Coprino... 114 4e-24 UniRef50_Q1YPI9 Putative uncharacterized protein n=1 Tax=gamma p... 114 7e-24 UniRef50_B8CNV0 Nucleotidyltransferase/DNA polymerase involved i... 114 8e-24 UniRef50_UPI00019102E2 DNA polymerase IV n=4 Tax=cellular organi... 114 8e-24 UniRef50_D0WMM1 Putative DNA repair polymerase n=1 Tax=Actinomyc... 114 9e-24 UniRef50_Q3SEZ7 Putative uncharacterized protein n=1 Tax=Thiobac... 113 2e-23 UniRef50_Q7PXH4 AGAP001404-PA n=4 Tax=Coelomata RepID=Q7PXH4_ANOGA 112 2e-23 UniRef50_B8KRW4 Putative uncharacterized protein n=1 Tax=gamma p... 112 4e-23 UniRef50_A3WNS1 DinP DNA polymerase-like protein n=1 Tax=Idiomar... 112 4e-23 UniRef50_A9VB80 Predicted protein n=1 Tax=Monosiga brevicollis R... 111 5e-23 UniRef50_Q7R724 Putative uncharacterized protein PY07765 (Fragme... 110 7e-23 UniRef50_A3ZPQ4 Putative uncharacterized protein n=2 Tax=Plancto... 110 7e-23 UniRef50_B2B126 Predicted CDS Pa_3_8130 n=2 Tax=Sordariales RepI... 110 7e-23 UniRef50_C8RUC9 DNA polymerase involved in DNA repair n=2 Tax=Co... 110 1e-22 UniRef50_UPI0001C31AE4 hypothetical protein Cwoe_4251 n=1 Tax=Co... 110 1e-22 UniRef50_A9UR36 Predicted protein n=1 Tax=Monosiga brevicollis R... 109 2e-22 UniRef50_B5EJ93 Putative uncharacterized protein n=2 Tax=Acidith... 109 2e-22 UniRef50_Q7UJH7 Putative uncharacterized protein n=1 Tax=Rhodopi... 109 2e-22 UniRef50_Q6NJ12 Putative uncharacterized protein n=1 Tax=Coryneb... 109 2e-22 UniRef50_UPI0001BC2B48 hypothetical protein BlinB_00220 n=1 Tax=... 109 3e-22 UniRef50_Q15ZX1 Putative uncharacterized protein n=1 Tax=Pseudoa... 108 4e-22 UniRef50_Q6A779 Nucleotidyltransferase/DNA polymerase involved i... 108 5e-22 UniRef50_Q5P4A3 Putative uncharacterized protein n=1 Tax=Aromato... 108 5e-22 UniRef50_C7R3Y5 Nucleotidyltransferase/DNA polymerase involved i... 107 7e-22 UniRef50_C5BND7 Putative uncharacterized protein n=1 Tax=Teredin... 107 7e-22 UniRef50_A8B5P1 DNA damage repair protein n=2 Tax=Giardia intest... 107 8e-22 UniRef50_C7RN50 Putative uncharacterized protein n=1 Tax=Candida... 106 2e-21 UniRef50_A9FIX7 Putative uncharacterized protein n=1 Tax=Sorangi... 106 2e-21 UniRef50_A6SZA5 Uncharacterized conserved protein n=3 Tax=Oxalob... 106 2e-21 UniRef50_B7FSY6 Predicted protein n=1 Tax=Phaeodactylum tricornu... 106 2e-21 UniRef50_C5CKZ3 Putative uncharacterized protein n=1 Tax=Variovo... 105 3e-21 UniRef50_C3KFQ7 Putative ultraviolet light resistance protein B ... 105 4e-21 UniRef50_C5JEX9 Sister chromatid cohesion protein n=2 Tax=Ajello... 105 4e-21 UniRef50_B5BUV4 DNA polymerase eta n=4 Tax=Agaricales RepID=B5BU... 104 5e-21 UniRef50_Q4PIG2 Putative uncharacterized protein n=1 Tax=Ustilag... 104 5e-21 UniRef50_C1E7T2 Umuc-like DNA repair protein n=1 Tax=Micromonas ... 103 1e-20 UniRef50_A7HCF7 Putative uncharacterized protein n=2 Tax=Anaerom... 102 2e-20 UniRef50_A4BIT4 Putative uncharacterized protein n=1 Tax=Reineke... 102 3e-20 UniRef50_A4RD58 Putative uncharacterized protein n=1 Tax=Magnapo... 102 4e-20 UniRef50_A7F1S2 Putative uncharacterized protein n=1 Tax=Sclerot... 101 5e-20 UniRef50_C4QYV7 Putative uncharacterized protein n=1 Tax=Pichia ... 100 7e-20 UniRef50_Q015X2 DNA polymerase iota/DNA damage inducible protein... 100 7e-20 UniRef50_Q21LY8 Putative uncharacterized protein n=1 Tax=Sacchar... 100 8e-20 UniRef50_B4VGM9 Putative uncharacterized protein n=2 Tax=Bacteri... 100 8e-20 UniRef50_B1XYC2 Putative uncharacterized protein n=1 Tax=Leptoth... 100 9e-20 UniRef50_C4ZK47 Putative uncharacterized protein n=1 Tax=Thauera... 100 2e-19 UniRef50_C9Y7V7 Putative uncharacterized protein n=1 Tax=Curviba... 99 2e-19 UniRef50_Q08N74 Nucleotidyltransferase/DNA polymerase involved i... 99 3e-19 UniRef50_A1WXU5 Putative uncharacterized protein n=1 Tax=Halorho... 99 4e-19 UniRef50_C6NX90 Putative uncharacterized protein n=1 Tax=Acidith... 98 4e-19 UniRef50_A1S6R3 Putative uncharacterized protein n=1 Tax=Shewane... 98 9e-19 UniRef50_Q6BM10 DEHA2F09196p n=2 Tax=Debaryomyces hansenii RepID... 98 9e-19 UniRef50_B9ZJT1 Putative uncharacterized protein n=1 Tax=Thioalk... 97 1e-18 UniRef50_A1KCL6 Putative uncharacterized protein n=1 Tax=Azoarcu... 97 1e-18 UniRef50_Q14N03 Putative dna polymerase iv c-terminal truncated ... 97 1e-18 UniRef50_B5JLQ0 Putative uncharacterized protein n=1 Tax=Verruco... 97 1e-18 UniRef50_A6GCV2 Putative uncharacterized protein n=1 Tax=Plesioc... 97 1e-18 UniRef50_D1R480 Putative uncharacterized protein n=1 Tax=Parachl... 97 2e-18 UniRef50_Q0A9P1 Putative uncharacterized protein n=1 Tax=Alkalil... 96 2e-18 UniRef50_C8Q3E7 Damage inducible protein P (DNA polymerase IV) (... 95 4e-18 UniRef50_C7X3F8 UvrA n=3 Tax=Enterococcus faecalis RepID=C7X3F8_... 95 4e-18 UniRef50_C1G404 Putative uncharacterized protein n=3 Tax=Paracoc... 94 6e-18 UniRef50_Q56YN7 Putative uncharacterized protein At1g49980 n=1 T... 94 8e-18 UniRef50_B5I0P9 Putative uncharacterized protein n=1 Tax=Strepto... 94 8e-18 UniRef50_Q5KGG8 Eta DNA polymerase, putative n=2 Tax=Filobasidie... 94 8e-18 UniRef50_A5DE10 Putative uncharacterized protein n=2 Tax=Pichia ... 94 1e-17 UniRef50_Q67N70 Putative uncharacterized protein n=1 Tax=Symbiob... 94 1e-17 UniRef50_A7VU61 Putative uncharacterized protein n=1 Tax=Clostri... 93 1e-17 UniRef50_B9PWD1 DNA polymerase eta, putative n=3 Tax=Toxoplasma ... 93 2e-17 UniRef50_B9Q2G6 DNA polymerase iota, putative n=2 Tax=Toxoplasma... 92 4e-17 UniRef50_A1VVG9 DNA-directed DNA polymerase n=1 Tax=Polaromonas ... 92 4e-17 UniRef50_B9BQL7 UmuC protein n=2 Tax=Burkholderia multivorans Re... 92 4e-17 UniRef50_C9SAM9 Putative uncharacterized protein n=1 Tax=Vertici... 91 6e-17 UniRef50_Q5BYF2 SJCHGC07422 protein (Fragment) n=1 Tax=Schistoso... 91 7e-17 UniRef50_B4UDR0 Putative uncharacterized protein n=1 Tax=Anaerom... 91 8e-17 UniRef50_C5DLU3 KLTH0G03586p n=2 Tax=Saccharomycetaceae RepID=C5... 91 8e-17 UniRef50_C7CNB5 Putative uncharacterized protein n=1 Tax=Methylo... 90 1e-16 UniRef50_UPI00006CB3A6 hypothetical protein TTHERM_00659050 n=1 ... 90 2e-16 UniRef50_Q6CDC9 YALI0C01573p n=1 Tax=Yarrowia lipolytica RepID=Q... 90 2e-16 UniRef50_Q04049 DNA polymerase eta n=8 Tax=Saccharomycetaceae Re... 89 3e-16 UniRef50_A3LN71 DNA polymerase eta subunit n=1 Tax=Pichia stipit... 89 3e-16 UniRef50_C5CQX8 Putative uncharacterized protein n=1 Tax=Variovo... 88 5e-16 UniRef50_Q4HDP3 Putative uncharacterized protein n=1 Tax=Campylo... 88 6e-16 UniRef50_C4Y9R5 Putative uncharacterized protein n=1 Tax=Clavisp... 88 6e-16 UniRef50_B6K9Y1 DNA polymerase, putative n=1 Tax=Toxoplasma gond... 88 6e-16 UniRef50_Q86ZI6 Related to DNA Polymerase iota (POLI) n=3 Tax=So... 88 7e-16 UniRef50_B6AK40 DNA polymerase eta, putative n=1 Tax=Cryptospori... 87 8e-16 UniRef50_A6GQI5 Putative uncharacterized protein n=1 Tax=Limnoba... 87 1e-15 UniRef50_C7I5M5 Putative uncharacterized protein n=1 Tax=Thiomon... 87 1e-15 UniRef50_C5NXP3 DNA-damage repair protein n=1 Tax=Gemella haemol... 86 3e-15 UniRef50_Q12AY4 Putative uncharacterized protein n=1 Tax=Polarom... 85 4e-15 UniRef50_C8WVC3 DNA repair nucleotidyltransferase/DNA polymerase... 85 5e-15 UniRef50_A9UX99 Predicted protein n=1 Tax=Monosiga brevicollis R... 85 5e-15 UniRef50_A1VWD1 Putative uncharacterized protein n=5 Tax=Burkhol... 85 5e-15 UniRef50_C7M0M6 Putative DNA-directed DNA polymerase n=1 Tax=Aci... 85 6e-15 UniRef50_C1D2K9 Putative Y-family DNA polymerase n=1 Tax=Deinoco... 85 6e-15 UniRef50_Q75EE5 AAR136Wp n=1 Tax=Eremothecium gossypii RepID=Q75... 84 7e-15 UniRef50_B9MJ85 Putative uncharacterized protein n=2 Tax=Comamon... 84 7e-15 UniRef50_Q4QCF2 DNA polymerase eta, putative n=3 Tax=Leishmania ... 84 9e-15 UniRef50_C5IWL2 UV repair DNA polymerase n=21 Tax=Gammaproteobac... 83 2e-14 UniRef50_A5LXS6 DNA-damage inducible protein P n=2 Tax=Streptoco... 83 2e-14 UniRef50_A5DV91 Putative uncharacterized protein n=1 Tax=Loddero... 83 2e-14 UniRef50_UPI0001913C3A DNA polymerase V subunit UmuC n=1 Tax=Sal... 82 3e-14 UniRef50_Q01QX1 Nucleotidyltransferase/DNA polymerase involved i... 82 3e-14 UniRef50_Q4PF20 Putative uncharacterized protein n=1 Tax=Ustilag... 82 4e-14 UniRef50_B8C8E2 Predicted protein n=1 Tax=Thalassiosira pseudona... 82 4e-14 UniRef50_A3WZ00 DNA polymerase IV n=1 Tax=Nitrobacter sp. Nb-311... 82 4e-14 UniRef50_A3EWL6 Polymerase ATREV1-444 n=1 Tax=Arabidopsis thalia... 81 6e-14 UniRef50_Q6CYA8 KLLA0A01848p n=1 Tax=Kluyveromyces lactis RepID=... 80 1e-13 UniRef50_A8GJ69 UV protection protein n=1 Tax=Serratia proteamac... 80 2e-13 UniRef50_B9WB35 DNA polymerase eta, putative n=3 Tax=Candida Rep... 80 2e-13 UniRef50_Q0UKS6 Putative uncharacterized protein n=1 Tax=Phaeosp... 79 2e-13 UniRef50_Q4QCF3 DNA polymerase eta, putative n=3 Tax=Leishmania ... 78 5e-13 UniRef50_Q2W1Y7 Putative uncharacterized protein n=1 Tax=Magneto... 78 6e-13 UniRef50_C1AAH6 Putative uncharacterized protein n=1 Tax=Gemmati... 78 6e-13 UniRef50_B9L412 Putative uncharacterized protein n=1 Tax=Thermom... 78 6e-13 UniRef50_D2LKG4 DNA-directed DNA polymerase n=1 Tax=Rhodomicrobi... 77 1e-12 UniRef50_B3L3B7 Putative uncharacterized protein n=1 Tax=Plasmod... 77 1e-12 UniRef50_Q3BNM7 ImpB/MucB/SamB family protein (N-terminal) n=8 T... 77 1e-12 UniRef50_C6MGZ1 DNA-directed DNA polymerase n=1 Tax=Nitrosomonas... 77 1e-12 UniRef50_B7AU37 Putative uncharacterized protein n=1 Tax=Bactero... 77 2e-12 UniRef50_C2FQ53 UvrA family protein n=1 Tax=Lactobacillus planta... 77 2e-12 UniRef50_A1WWK8 Putative uncharacterized protein n=1 Tax=Halorho... 76 2e-12 UniRef50_A5K6H4 Putative uncharacterized protein n=1 Tax=Plasmod... 76 2e-12 UniRef50_B5JUJ6 Putative uncharacterized protein n=1 Tax=gamma p... 76 3e-12 UniRef50_C1MYC1 Predicted protein n=1 Tax=Micromonas pusilla CCM... 76 3e-12 UniRef50_Q5CPV1 DinB/family X-type DNA polymerase n=1 Tax=Crypto... 75 5e-12 UniRef50_B5J847 Putative uncharacterized protein n=2 Tax=Octadec... 74 8e-12 UniRef50_Q6MQS5 Putative uncharacterized protein n=1 Tax=Bdellov... 74 1e-11 UniRef50_A7F9S4 Putative uncharacterized protein n=1 Tax=Sclerot... 74 1e-11 UniRef50_C9Y1T2 Putative uncharacterized protein n=1 Tax=Cronoba... 73 1e-11 UniRef50_A1VWD4 DNA-directed DNA polymerase n=1 Tax=Polaromonas ... 73 2e-11 UniRef50_C5T314 UMUC-like DNA-repair protein n=1 Tax=Acidovorax ... 72 5e-11 UniRef50_Q2Y7D7 DNA polymerase V n=1 Tax=Nitrosospira multiformi... 72 5e-11 UniRef50_A8UAE9 Putative uncharacterized protein n=1 Tax=Carnoba... 71 6e-11 UniRef50_C2QVF5 DNA-damage repair protein n=1 Tax=Bacillus cereu... 71 7e-11 UniRef50_A7VEX4 Putative uncharacterized protein n=1 Tax=Clostri... 71 8e-11 UniRef50_Q55931 UmuC protein n=1 Tax=Synechocystis sp. PCC 6803 ... 70 2e-10 UniRef50_Q8I347 Putative uncharacterized protein n=1 Tax=Plasmod... 69 2e-10 UniRef50_C1RL95 Putative uncharacterized protein n=1 Tax=Cellulo... 69 4e-10 UniRef50_Q4D5H7 Putative uncharacterized protein n=2 Tax=Trypano... 68 6e-10 UniRef50_Q384F9 Putative uncharacterized protein n=3 Tax=Trypano... 68 7e-10 UniRef50_Q4UFQ5 Putative uncharacterized protein n=2 Tax=Theiler... 67 1e-09 UniRef50_B5J622 Putative uncharacterized protein n=1 Tax=Octadec... 67 1e-09 UniRef50_UPI00016987CF DNA-directed DNA polymerase n=1 Tax=Endor... 67 1e-09 UniRef50_Q14N04 Putative dna polymerase iv n-terminal and c-term... 67 1e-09 UniRef50_Q1NNX6 Putative uncharacterized protein n=1 Tax=delta p... 66 2e-09 UniRef50_Q2IIA1 Putative uncharacterized protein n=1 Tax=Anaerom... 66 3e-09 UniRef50_C0BD29 Putative uncharacterized protein n=1 Tax=Coproco... 65 7e-09 UniRef50_A2W7A2 Putative uncharacterized protein n=1 Tax=Burkhol... 64 7e-09 UniRef50_Q21Z43 Putative uncharacterized protein n=1 Tax=Rhodofe... 64 8e-09 UniRef50_UPI0001BC9B94 impB/mucB/samB family protein n=1 Tax=Pse... 64 1e-08 UniRef50_Q6F8Z6 Fragment of component of DNA polymerase V (UmuC)... 63 2e-08 UniRef50_Q8TS33 Predicted protein n=1 Tax=Methanosarcina acetivo... 62 3e-08 UniRef50_O31841 DNA repair protein homolog yozK n=173 Tax=Bacill... 62 3e-08 UniRef50_B9DP45 Truncated ImpB/MucB/SamB family protein (Fragmen... 62 4e-08 UniRef50_A8J5N9 DNA polymerase eta/iota (Fragment) n=1 Tax=Chlam... 62 4e-08 UniRef50_C5GUZ9 DNA polymerase iota n=4 Tax=Ajellomyces RepID=C5... 61 7e-08 UniRef50_Q0PGJ8 AIBO80 (Fragment) n=1 Tax=Bos taurus RepID=Q0PGJ... 61 1e-07 UniRef50_A9VZM8 DNA-directed DNA polymerase n=4 Tax=Methylobacte... 59 2e-07 UniRef50_UPI00016B15B1 hypothetical protein BpseBC_02629 n=8 Tax... 58 6e-07 UniRef50_C5B9L5 DNA polymerase IV n=1 Tax=Edwardsiella ictaluri ... 58 8e-07 UniRef50_D0SUP5 Predicted protein n=1 Tax=Acinetobacter lwoffii ... 57 1e-06 UniRef50_A7MTX6 Putative uncharacterized protein n=3 Tax=Vibrio ... 57 1e-06 UniRef50_C4QSD8 DNA polymerase IV / kappa, putative (Fragment) n... 57 1e-06 UniRef50_UPI0001BC93B4 ultraviolet light resistance protein B, i... 57 2e-06 UniRef50_Q93QE1 Orf5 n=6 Tax=Streptococcus RepID=Q93QE1_STRPN 56 3e-06 UniRef50_A7MP32 Putative uncharacterized protein n=1 Tax=Cronoba... 55 5e-06 UniRef50_B8IIJ8 Putative uncharacterized protein n=1 Tax=Methylo... 52 4e-05 UniRef50_C1RL94 Putative uncharacterized protein n=1 Tax=Cellulo... 52 6e-05 UniRef50_A5UTK6 Putative uncharacterized protein n=1 Tax=Roseifl... 51 1e-04 UniRef50_Q6F8Y8 Fragment of component of DNA polymerase V (UmuC)... 50 2e-04 UniRef50_A8UAE8 Putative uncharacterized protein n=1 Tax=Carnoba... 49 3e-04 UniRef50_A9MHU5 Putative uncharacterized protein n=1 Tax=Salmone... 47 0.001 Sequences not found previously or not previously below threshold: UniRef50_B9K728 Nuclease (RecB family)-like protein n=1 Tax=Ther... 47 0.001 UniRef50_A3QER9 Putative uncharacterized protein n=1 Tax=Shewane... 47 0.001 UniRef50_D1REI8 Putative uncharacterized protein n=1 Tax=Legione... 47 0.001 UniRef50_UPI000187C717 hypothetical protein MPER_04090 n=1 Tax=M... 46 0.003 UniRef50_A7NMG2 Putative uncharacterized protein n=1 Tax=Roseifl... 46 0.003 UniRef50_B0TUJ6 Putative uncharacterized protein n=1 Tax=Shewane... 45 0.006 UniRef50_B8IQT5 Putative uncharacterized protein n=1 Tax=Methylo... 45 0.007 UniRef50_B0KIZ4 Putative uncharacterized protein n=1 Tax=Pseudom... 44 0.009 UniRef50_Q1CC71 Error-prone repair protein UmuC n=9 Tax=Yersinia... 44 0.009 UniRef50_C6QRJ6 Putative uncharacterized protein n=1 Tax=Geobaci... 44 0.009 UniRef50_A4YMQ8 Putative uncharacterized protein n=1 Tax=Bradyrh... 43 0.019 UniRef50_A1RYZ3 Rad51-like protein n=1 Tax=Thermofilum pendens H... 43 0.020 UniRef50_UPI0000D52C0C Hypothetical Cytosolic Protein n=1 Tax=Ps... 43 0.021 UniRef50_D2C795 RecB family nuclease, putative n=5 Tax=Thermotog... 42 0.041 UniRef50_Q5JTF2 Polymerase (DNA directed), eta (Fragment) n=5 Ta... 42 0.050 UniRef50_A8LST4 Putative uncharacterized protein n=1 Tax=Dinoros... 41 0.062 UniRef50_B9NM42 Adenylate/guanylate cyclase n=2 Tax=Rhodobactera... 41 0.077 UniRef50_UPI0001693F66 DNA polymerase IV n=2 Tax=Paenibacillus l... 41 0.078 UniRef50_A3DL12 DEAD/DEAH box helicase domain protein n=1 Tax=St... 41 0.084 UniRef50_UPI0001903B53 DNA polymerase III alpha subunit protein ... 41 0.084 UniRef50_UPI000180D06C PREDICTED: similar to REV1-like n=1 Tax=C... 41 0.084 UniRef50_C1ZKU0 Putative uncharacterized protein n=1 Tax=Plancto... 41 0.087 >UniRef50_P04152 Protein umuC n=103 Tax=Gammaproteobacteria RepID=UMUC_ECOLI Length = 422 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 422/422 (100%), Positives = 422/422 (100%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD Sbjct: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG Sbjct: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP Sbjct: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF Sbjct: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN Sbjct: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL Sbjct: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR Sbjct: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 Query: 421 VK 422 VK Sbjct: 421 VK 422 >UniRef50_A4SWQ9 DNA-directed DNA polymerase n=13 Tax=cellular organisms RepID=A4SWQ9_POLSQ Length = 450 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 189/424 (44%), Positives = 270/424 (63%), Gaps = 4/424 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 FAL DVN FY SCE VF+P L P+VVLSNNDGC +AR+AE KALG+K G PWF+ ++L Sbjct: 28 FALVDVNNFYVSCERVFQPKLEDVPMVVLSNNDGCAVARSAEVKALGIKTGTPWFQMQEL 87 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL-TGVRNCRDLTDFG 120 ++ G+ +SSNY LY DMS+RV+ L +P +E+YSIDE+F + T ++ +D + G Sbjct: 88 AKKHGIQAYSSNYTLYGDMSSRVVEVLRAFTPNLEVYSIDESFLQIETVLKQYQDTVELG 147 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMSA 178 R ++ V T L V VGI +KTLAK ANH AKK Q+ GV D++ E + MS Sbjct: 148 RSMKEKVRDTTGLPVCVGIGASKTLAKFANHLAKKHQQF-AGVCDVNAMPKEEFYQWMSE 206 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 V +VWGIGR+++KKL A I +V DL + +R+ + VV+ER ELRG CL+LE Sbjct: 207 TSVAEVWGIGRQLAKKLKAQNIHSVFDLLQASPQAMRQQYGVVMERLCYELRGVSCLKLE 266 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E AP KQ+II SRSFG+ +T + +++ +AARAAEKLRS++ ++ FI+T+PF Sbjct: 267 EVAPAKQQIIASRSFGKLVTKLEELAESVAMHAARAAEKLRSQNGTTGALTVFIQTNPFK 326 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 NEP + S ++ L P+ ++ + NAA + L I+Q+G RY+KAGV+L + AQ Sbjct: 327 QNEPQHHQSITIPLSDPSDNTLTLTNAALKGLKQIYQSGFRYKKAGVILNLISDKPTAQQ 386 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 +LF+D + S LM +D +N++ G + A G +Q+WQM+ SP YTTR +L Sbjct: 387 SLFEDIETKGKSAHLMKAVDEINSRFGNAAIRSAAMGTKQEWQMRSGNRSPNYTTRWDEL 446 Query: 419 LRVK 422 + Sbjct: 447 PVAR 450 >UniRef50_Q5N669 DNA polymerase V n=9 Tax=Bacteria RepID=Q5N669_SYNP6 Length = 418 Score = 348 bits (893), Expect = 2e-94, Method: Composition-based stats. Identities = 193/421 (45%), Positives = 262/421 (62%), Gaps = 10/421 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE VF P L G+PVVVLSNNDGCVIAR+AEAKALG+ MG P+FK KD Sbjct: 1 MFALIDCNNFYVSCERVFDPKLQGQPVVVLSNNDGCVIARSAEAKALGIPMGIPFFKVKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + FSSNY LY DMS RVM TL L P +E+YSIDEAF D +G + G Sbjct: 61 LISQHQIQVFSSNYALYGDMSQRVMQTLATLCPDLEVYSIDEAFLDFSGFQAQ--PLQQG 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + IR TV Q T + V +GIA TK LAK+AN AK+ G V + + + + ++ LP Sbjct: 119 QLIRQTVGQWTGIPVSIGIAATKVLAKVANKLAKQN-----GGVFVLSPSKVQAVLMTLP 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V++VWGI R ++L A+ I T +L T++ +R+ FN+VLER VRELRGE CL LE Sbjct: 174 VEEVWGISSRWGQRLRALNISTAAELQATNLNLMRQQFNIVLERIVRELRGESCLPLESI 233 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +Q ++ SRSFG+ IT P ++QA+ +Y +RAAE+LRS +++ F++T+ F N Sbjct: 234 VNPQQSLVVSRSFGQPITTLPELKQAVATYVSRAAEELRSRQLTTSYLTVFVRTNRFQEN 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 Y +AS LLTPT + ++ A R ++++Q G Y+KAGV+ S Q +L Sbjct: 294 --YEAPNASQGLLTPTNHTGKLLEIALRCTESLYQPGRAYKKAGVLFQGLGSAQSIQQSL 351 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F+++ LM MD LN + GR +L++ G +Q W M+ SP+YTTR DL Sbjct: 352 FEESDS-EKGAALMVTMDRLNRRYGRQSLHYGATGTRQPWAMRSDQRSPQYTTRWQDLPE 410 Query: 421 V 421 V Sbjct: 411 V 411 >UniRef50_A0L9G4 DNA-directed DNA polymerase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9G4_MAGSM Length = 421 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 197/421 (46%), Positives = 259/421 (61%), Gaps = 3/421 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 +AL D N FYASCE +F+P L GKPVVVLSNNDGC IAR+ EAK LG+ MG P + + L Sbjct: 3 YALVDCNNFYASCERLFQPHLEGKPVVVLSNNDGCAIARSNEAKQLGIAMGAPLHQIQAL 62 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 ++ V FSSNY LY D+S RVM TLE+L+PRVEIYSIDEAF DL G+ + GR Sbjct: 63 IKQHQVALFSSNYPLYGDLSARVMRTLEQLAPRVEIYSIDEAFLDLQGMPAPQR-QILGR 121 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 I V + T + V VGI TKTLAK+AN AKK + GV+DLS+ + RK + LPV Sbjct: 122 TIHQQVKRWTGIPVSVGIGPTKTLAKVANRFAKKSPKT-EGVLDLSDPQWCRKALHQLPV 180 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +VWG+G R +K+L+ GI T L L+ R+ FNVVLERTVRELRGE + Sbjct: 181 GEVWGVGPRWAKRLNQAGIDTALQLSRMPPPLARQQFNVVLERTVRELRGESVIPFAALP 240 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 +Q I +R+FG++I + +++AI S+ RAAEKLR + + FI T+ F+ + Sbjct: 241 AARQSIATTRTFGQKIHTHDEIKEAISSFTVRAAEKLRKQGLLAAALHLFITTNRFSEQD 300 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 Y NS + P D+ ++ A +LDAI++ G+RYQKAGV+L S Q +LF Sbjct: 301 LQYKNSLTWSFQQPQDDTLTLLTGAHAALDAIYRPGYRYQKAGVILLGLVSAQHFQPSLF 360 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG-IQQQWQMKRAMLSPRYTTRSSDLLR 420 P S LM +D LN K GRGT+ F +G + W M++ SP YTTR SDL + Sbjct: 361 APPPRLPNSRALMRTLDGLNQKMGRGTVRFGAEGPPKPSWGMRQLQRSPAYTTRWSDLPQ 420 Query: 421 V 421 V Sbjct: 421 V 421 >UniRef50_B8FBE8 DNA polymerase IV n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=DPO4_DESAA Length = 396 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 97/400 (24%), Positives = 164/400 (41%), Gaps = 18/400 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AFYAS E + P+L G+ V+V +N G V + + EA+ALGV+ P + Sbjct: 5 LIIHVDMDAFYASVELLDNPELRGQCVIVGGASNRGVVCSASYEARALGVRSAMPIVTAR 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L R V Y ++S +V + +P VE S+DEAF D+T + Sbjct: 65 KLCPRG--VFLPVRRARYQEISRKVFEIFHQYTPLVEPISLDEAFMDVTSSTRLFGSGEE 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 IR + +T GIA+ K +AK+A+ K + + ++ ++ + Sbjct: 123 IAANIRRQIESSLGITASAGIAKNKLVAKIASDLCKPNG------LLVVPADQTQEFLDP 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ +WG+G KL ++G+KT+ D+ + +F E RG +E Sbjct: 177 LPISRLWGVGPASRNKLISLGVKTIRDVRKLTQEMLSANFGRNGEVIYAFARGMDDRPVE 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I +F + + + + R A ++R E R ++ +K + F Sbjct: 237 P-PGAAKSIGREITFDRNVYTLEEAYKWMLFLSERVARRMRKEEATGRTVNIKVKYADF- 294 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-SQGVAQ 357 + SV L +PT D +I A + L + GV L Q Sbjct: 295 -----IQVTRSVTLESPTDDPGEIYTHAKKLLQKTLVGSKAVRLLGVTLSQLVTPGQAWQ 349 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 LFDD +L +D + + G GT+ A Sbjct: 350 PGLFDDPTASERKRKLNQALDGIWDRFGSGTVEPAALVTD 389 >UniRef50_D2QVG5 DNA-directed DNA polymerase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVG5_9SPHI Length = 422 Score = 337 bits (863), Expect = 7e-91, Method: Composition-based stats. Identities = 174/423 (41%), Positives = 247/423 (58%), Gaps = 3/423 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M AL D N FY SCE F P L G+PVVVLSNNDG ++AR+ E K L V MG P+F+ + Sbjct: 1 MIALADCNNFYVSCERSFNPSLNGQPVVVLSNNDGSIVARSNEVKKLNVGMGQPFFEIER 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDF 119 L + G+ FSSNY LY MS RVM+ VE+YSIDEAF DL G + DLT F Sbjct: 61 LRQEHGIHVFSSNYVLYGSMSARVMAIFGRFVEDVEVYSIDEAFFDLNGYESIYPDLTTF 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +R+TV+Q T + + +GIA TKTLAK+AN AK Q GV LS E+ R+ + L Sbjct: 121 AHNLRSTVMQWTRIPISIGIAPTKTLAKVANWYAK-RQPDASGVCMLSTPEQIRQALEQL 179 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 VD++WGIGRR + L GIKT L+ + +++KHF + R V ELRGE C +E Sbjct: 180 SVDELWGIGRRYASFLKQNGIKTALEFSQCHDVWVQKHFTINGLRLVYELRGEVCRTVET 239 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + + SFGE + D P++ +A+ +Y ARA+EKLR + ++ F+ T+ F Sbjct: 240 QPSARKSVCVAPSFGELVGDRPTLYEALTNYVARASEKLRKQRLAAGAMTVFLHTNRFRA 299 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 Y NS S L PT ++ + A ++LD+I+++G+ YQK G++L + Sbjct: 300 AVGQYSNSRSFTLPVPTNLIPELSHYAIKALDSIYKSGYAYQKVGLILSALQPDTHQTPD 359 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 +F + P +L+ ++ LN+K GR + FA QG W+MK+ LSP YTT D++ Sbjct: 360 VF-EGELDPRLLKLLPTVERLNSKLGRDKVRFAAQGFNHLWKMKQRWLSPCYTTHWKDII 418 Query: 420 RVK 422 K Sbjct: 419 ITK 421 >UniRef50_A1U8F5 DNA-directed DNA polymerase n=6 Tax=Gammaproteobacteria RepID=A1U8F5_MARAV Length = 430 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 210/423 (49%), Positives = 283/423 (66%), Gaps = 4/423 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FALCD+N+FYASCE +F P G+PVVV SNNDGC +AR+ EAKALG+KMG P F+ ++ Sbjct: 8 VFALCDMNSFYASCEQLFNPAFRGRPVVVASNNDGCAVARSPEAKALGIKMGQPIFELRE 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + G++ SSNY LY DMS+R M L E +PRV YSIDEAF DLTG+ + DFG Sbjct: 68 YVEKHGLIVCSSNYALYGDMSHRFMLALAECAPRVMPYSIDEAFLDLTGIDSVVSYLDFG 127 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++ V T L + VGIA + TLAKLANHAAK + T GVVDL++ +RQR+LM P Sbjct: 128 HHVKELVRIWTGLPICVGIAPSPTLAKLANHAAKHYP-ATRGVVDLTDRDRQRRLMHLTP 186 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL-QLEE 239 V++VWGIGR++SK+LDA+GIKT LDLAD+D ++IR HF+VV+ERTVREL G PC L E Sbjct: 187 VEEVWGIGRKLSKRLDALGIKTALDLADSDPKWIRDHFSVVVERTVRELNGIPCHSDLLE 246 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 AP KQ+I+CS+SFG +TD SM AI ++A+RA+EKLR E++ C +++ F+ TS F Sbjct: 247 VAPAKQQILCSKSFGAPVTDLNSMLAAITAHASRASEKLRRENRDCGYLAAFMSTSRFRT 306 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 Y + L PT D+R+I+ A ++W+ G+RY KAG++L DF G Q + Sbjct: 307 GSHYANQQG-ITLPFPTSDTREIVRHAVSIARSLWREGYRYNKAGIVLTDFRVPGACQSD 365 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ-GIQQQWQMKRAMLSPRYTTRSSDL 418 F + +LM +D +N+ G+ T+ F Q Q WQM+R LSP YTTR +D+ Sbjct: 366 FFSQVEDDERNRKLMRTLDKINSIAGKNTIQFGRQIHKNQSWQMRRENLSPAYTTRWADI 425 Query: 419 LRV 421 Sbjct: 426 PVA 428 >UniRef50_Q3ABL2 DNA polymerase IV n=4 Tax=Firmicutes RepID=DPO4_CARHZ Length = 391 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 99/400 (24%), Positives = 168/400 (42%), Gaps = 22/400 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AF+A+ E P+L GKPV+V G V A + EA+ GV+ ++ Sbjct: 5 VIIHVDMDAFFAAVEQRDNPELKGKPVIVGGVPGERGVVAAASYEARKFGVRSAMSLWEA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-T 117 L + N++ Y ++S ++ E +P VE S+DEA+ D+TG + Sbjct: 65 ARLCPHG--IFIPGNHKKYQEVSEKIFRIFREYTPLVEPVSLDEAYLDVTGSQKLFGPGA 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + G++I+ + + T LT VG+A K LAKLA+ K + ++ Sbjct: 123 EIGKKIKKRIFEETELTASVGVAPNKFLAKLASEVNKPDGFCE------VREDNVLDFLA 176 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV+ +WG+G ++ ++L+ MGIKTV D + F+RK F V+ + RG ++ Sbjct: 177 PLPVEMLWGVGEKMKERLNDMGIKTVQDFWELPEFFLRKKFGVLGQNLYYLSRGIDFREV 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + + + +D + + LR E Y IS I+ S F Sbjct: 237 IPERVP-KSLGKEITLQKDSSDVDYLLGKLLGLTMAVGRGLRREGFYAGGISVKIRLSSF 295 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-QGVA 356 + + PT + A R + + GV G Sbjct: 296 ------ITYTRHSRFFEPTWMDDVLYREAKRLFLENYHGELPVRLVGVTATPLVPVGGGR 349 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 Q++LF ++ E L ++D LN K G T+ A Sbjct: 350 QISLFGED---LRRENLYPIIDRLNHKYGNKTVTRAKILK 386 >UniRef50_C0GDP3 DNA-directed DNA polymerase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDP3_9FIRM Length = 395 Score = 335 bits (858), Expect = 2e-90, Method: Composition-based stats. Identities = 97/408 (23%), Positives = 176/408 (43%), Gaps = 22/408 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFKQ 58 D+NAF+ASC P GKP++V + G ++ + EA+ GVK ++ Sbjct: 4 IIHVDMNAFFASCHQAQNPQWQGKPLLVAGDPQKRHGIILTASYEARKFGVKTAMAVWQA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-T 117 K L + + S +++LY+ S R+M+ +E+ +P VE +SIDEA+ D+TG Sbjct: 64 KKLCPQGIYI--SPDHKLYSAYSKRIMAIMEDYTPLVEPFSIDEAWLDVTGSARLFGTTE 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + GR ++ +L T + VGI+ K LAK+A+ K + +++ Sbjct: 122 EIGRLLQQRILDETGIPCSVGISGNKFLAKMASERQKPQG------FTILWPRDVPEVLW 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV+++ G+GR+++ L MGI+T+ +LA +R + F V E G + Sbjct: 176 PLPVEEMVGVGRKMAPALHEMGIETIGELAAMPLRLLVSRFGVAGESLHHLANGRDDSPV 235 Query: 238 EEFA-PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + T + + S + I D + + + + + +LR R ++ +K Sbjct: 236 DPTVFDTVKSVGNSLTLPRDINDPEDVARVLLKLSEKVGRRLRQSGNVARTVTLTVKDQN 295 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-V 355 F + S L PT + I A ++ + + GV + + Sbjct: 296 F------VSVTRSRTLHEPTGFTDVIYKTAVDIHQKQFEPWRKVRLLGVSVSNLLPADGG 349 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 QL+LF + E L V D + + G + A +++ K Sbjct: 350 VQLSLFGASE--ERMENLTRVTDRIRDRYGDTVIGRARLCKEKETPPK 395 >UniRef50_Q0AX85 DNA-directed DNA polymerase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AX85_SYNWW Length = 393 Score = 334 bits (855), Expect = 5e-90, Method: Composition-based stats. Identities = 100/401 (24%), Positives = 163/401 (40%), Gaps = 19/401 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 CD++AF+AS E + P L GKPVVV + + G V + EA+ G++ P + Sbjct: 7 ILHCDLDAFFASVEQLDNPSLRGKPVVVGGSMHSRGVVSTCSYEARKFGIRSAMPIAQAY 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + V N Y ++S +V S L SP EI SIDEAF D++G + Sbjct: 67 RLCPQ--AVFLPVNMPRYLEISKQVFSILSRYSPIKEIISIDEAFLDISGCSSLYGSPEK 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 G I V LT+ VGI+ K LAKLA+ K + + +L+ Sbjct: 125 IGCLINEQVYSELGLTISVGISYNKFLAKLASDMDKPNG------LRIITESEALELLRP 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV +WGIG++ + LD +GIKT+ D+ D+ ++ G +E Sbjct: 179 LPVSRIWGIGQKTEQSLDKLGIKTIGDIQDSPPEWLEDKIGSAGRLFWELAHGIDRRAVE 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F E I D + + I +AA KLR E + I+ ++ S F Sbjct: 239 PEH-ERKSLGREETFPEDINDTAYLEKLIVQFAAELCRKLRQEALFAATITIKLRYSNFK 297 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S + D + A+ L + + G+ LG + Sbjct: 298 ------TITRSKTINPCNSD-IIVTQIASELLHHSYNNKQPLRLFGLSLGQLSPAASLEQ 350 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + + + +MD + + G G + A + Sbjct: 351 GSLFEPQSNADYKSIDRLMDEIRDRFGPGAIKRANLLPNKD 391 >UniRef50_B7JBK8 UmuC protein n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7JBK8_ACIF2 Length = 427 Score = 333 bits (854), Expect = 8e-90, Method: Composition-based stats. Identities = 203/423 (47%), Positives = 258/423 (60%), Gaps = 4/423 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FY SCE VFRPDL G+PVVVLSNNDGCV+AR+AE KALGV MG PWF+ + L Sbjct: 3 IALVDANNFYVSCERVFRPDLEGRPVVVLSNNDGCVVARSAEVKALGVAMGTPWFQLQKL 62 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 RR G++ SSNY LYADMSNR+M L SP E+YSIDE F DL+G R L+ G+ Sbjct: 63 ARREGIIALSSNYSLYADMSNRMMGILSTFSPIQEVYSIDECFLDLSGFAQDR-LSQLGQ 121 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG-GVVDLSNLERQRKLMSALP 180 R V Q L VGVGIA TKTLAKLANH AKK G V D QR L+ LP Sbjct: 122 AARQRVRQWVGLPVGVGIAATKTLAKLANHVAKKRPEYAGVCVWDDLPEGDQRHLLQQLP 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWG+GR+ + +L GI+TV DL D +RK F++++ER++RELRGEPC+ + E Sbjct: 182 VSEVWGVGRQWTTRLQETGIQTVWDLRQADPALMRKRFSILMERSIRELRGEPCIAMVEI 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P +QEI SRSFG +T + +AI Y RA KLR + + FI TSPF Sbjct: 242 PPPRQEIQSSRSFGRPVTSAEELGEAISLYTVRAVYKLRRQGSVAGALRVFIHTSPFQAR 301 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y + +V L P+QD+R + A +L ++++G Y KAGV L + S Q +L Sbjct: 302 LPSYHATRTVALNRPSQDTRVFLQAGRIALADMYRSGFAYAKAGVHLLEITSADALQADL 361 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ--WQMKRAMLSPRYTTRSSDL 418 F + +LMT +D +NA+ G GTL G+Q+ W MKR SP YTTR ++L Sbjct: 362 FLSAEEEARAHRLMTTLDRVNARFGTGTLQPGVAGLQEPRGWAMKRGNKSPAYTTRWAEL 421 Query: 419 LRV 421 R Sbjct: 422 ARA 424 >UniRef50_Q11V03 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=5 Tax=Bacteroidetes RepID=Q11V03_CYTH3 Length = 420 Score = 331 bits (849), Expect = 2e-89, Method: Composition-based stats. Identities = 173/422 (40%), Positives = 247/422 (58%), Gaps = 2/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL D N FYASCE VF P L GKP+VVLSNNDGCVIAR+ EAKALG+ MG +F ++ Sbjct: 1 MYALIDCNNFYASCERVFNPSLNGKPIVVLSNNDGCVIARSNEAKALGIDMGGAYFMIEE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 ++ V FSSNY LY DMS RVM+TL E +P +E+YSIDE+F + G DL +G Sbjct: 61 ALKKHNVFVFSSNYTLYGDMSQRVMNTLAEFTPEIEVYSIDESFLNFEGFELLGDLKIYG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR TV + T + V +GIA TK LAKL+N AKK + V L + E+ + Sbjct: 121 TTIRNTVFRNTGIPVSIGIAPTKALAKLSNRIAKKNKEYNH-VCVLDSQEKIMAALKITT 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 VD++WGIGR L GI+T D ++RK+ +VV R +EL+GE CL+LE Sbjct: 180 VDNIWGIGRAYHNFLLNHGIQTTYDFVQQPEEWVRKNMSVVGLRLHKELKGEKCLELELV 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A KQ I SRSFG +TD +++A+ ++A+R A KLR + C + + T+ + Sbjct: 240 AMAKQNICTSRSFGRYLTDIDPIKEAMSNFASRCALKLRKDKSVCTLVQILLHTNKHKPD 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 +P Y + + L PT + ++I A+ R+LD +++ G+RY K GV++ + Q NL Sbjct: 300 QPQYFVNKVITLPVPTNSTIELIQASLRALDLVYKPGYRYMKCGVIVSGIVPEDRVQQNL 359 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 FD ++ T+MD LN G + G+ +QW +K LS Y+TR +++ Sbjct: 360 FDTVDRS-KHNKVTTIMDKLNKSLGADFVKVGSLGVTKQWHLKAEKLSQCYSTRWDEIIV 418 Query: 421 VK 422 +K Sbjct: 419 IK 420 >UniRef50_B9M459 DNA-directed DNA polymerase n=14 Tax=Bacteria RepID=B9M459_GEOSF Length = 420 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 94/417 (22%), Positives = 166/417 (39%), Gaps = 32/417 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVV-LSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAF+AS E P L GKPV V S+ V + EA+A GVK G ++ K Sbjct: 14 IIMHVDMNAFFASVEQQNDPRLRGKPVAVVGSSKRTIVTTCSYEARAFGVKTGMALWEAK 73 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 +V + Y +S+ +M + + +P VE +SIDEAF D++G + + Sbjct: 74 SCCPNLILVVGKNR--EYTRISSLIMKLMYDFTPLVETFSIDEAFLDISGSLSLFGTPEN 131 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++A + + LT +GIA K LAKLA+ K + + M Sbjct: 132 IASLLKARIGDQFGLTCSIGIAPNKLLAKLASDMQKPDG------LTVIKPAEVALTMDR 185 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ D+ GIG++ K L +GI+T DL ++ +R+ F +V E G + Sbjct: 186 TPIRDMCGIGKKTEKSLTMLGIRTCGDLGRFPVKLLRQKFGIVGEALHLMGLGVDDSPVV 245 Query: 239 EFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + S + + + + + + A ++R + + ++ + Sbjct: 246 PQEESDLVKSVGHSMTLEKDLEKREDILRYLLQLAEMVGRRMRRYGVAGKTVCLSVRYAD 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + S + L T S +I A LD++ + GV L + Q Sbjct: 306 F-----FTNFSRQLTLPEYTNLSAEIYRGAVTLLDSVELT-QPVRLLGVKLSNLRHQDEQ 359 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI----------QQQWQMK 403 LF L MD +N++ G ++ + W+ + Sbjct: 360 LP-LF---EGERKKAHLAKAMDEVNSRFGEFSVTYGTLLTVEGKKGSFVISPAWRPQ 412 >UniRef50_B0VH44 Protein umuC n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH44_9BACT Length = 429 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 192/422 (45%), Positives = 257/422 (60%), Gaps = 3/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D N FY SCE VF P L KPV VLSNNDGC+++R+ E K L + MG P FK + Sbjct: 11 IVALVDCNNFYVSCERVFNPKLNNKPVAVLSNNDGCIVSRSQEIKDLKIPMGAPGFKYEG 70 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ G SSNY LYADMS+RVM L SP VEIYSIDEAF L G +N RDL +FG Sbjct: 71 LIKKHGGTLLSSNYALYADMSSRVMEVLALFSPEVEIYSIDEAFLGLNGFKN-RDLENFG 129 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++I+ TV Q T + V VGI+QTKTLAK+ANH AK++ G + L + ER K ++ P Sbjct: 130 KKIKRTVFQWTGIPVSVGISQTKTLAKVANHFAKRYSAFQ-GSLCLLDDERITKALAKTP 188 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWGIGR+ K L I+T L L D + +FI + V +TV ELRG C+ L+E Sbjct: 189 VSEVWGIGRQYDKFLRQHKIETALQLRDAEDKFIEHYLTSVGLKTVLELRGYACIDLDEA 248 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I+ SRSFG++++ +++AI Y RAAEKLR + + F+ T+ F Sbjct: 249 PANKKSIVTSRSFGKQVSSLNDLQEAISEYVTRAAEKLRKQKSVAGLLMVFLSTNRFK-E 307 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y NS S L PT + ++I A LD ++ G ++KAGVML D + L+ Sbjct: 308 GPQYNNSLSTTLFPPTAYTPELIKTALNLLDDLYLPGFEFKKAGVMLADIIPEKDVPLSF 367 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 D N ++LM MD LN G+ TL++A GI++ W+MKRA LSP YTT +DL + Sbjct: 368 MDTNYLDDKRKKLMEAMDKLNRTYGQDTLFYASSGIKKDWKMKRAKLSPHYTTHWNDLPK 427 Query: 421 VK 422 VK Sbjct: 428 VK 429 >UniRef50_A1BFA1 DNA-directed DNA polymerase n=7 Tax=Chlorobiaceae RepID=A1BFA1_CHLPD Length = 426 Score = 330 bits (846), Expect = 6e-89, Method: Composition-based stats. Identities = 173/427 (40%), Positives = 247/427 (57%), Gaps = 9/427 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE VF P L +PVVVLSNNDGC IAR+ EAKA+G+ MGDP +K ++ Sbjct: 1 MFALVDCNNFYVSCERVFNPGLQNRPVVVLSNNDGCFIARSEEAKAIGLAMGDPAYKNRE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L R+ V +S+N+ LY DMS RVM TLE L+P +EIYSIDE F DL G +L D+ Sbjct: 61 LLRQHNVAVYSANFPLYGDMSARVMKTLETLAPDLEIYSIDECFLDLGGFGK-FNLADYA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R TV + T + V +GI TKT+AK AN AKK GGV LS R+ + A+ Sbjct: 120 AATRKTVHRNTGIPVSIGIGATKTIAKAANRMAKKN-LSLGGVCILSTAAATREALGAMA 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ +WGIG + + L I T LD AD +++KH ++ R +EL G CL LE Sbjct: 179 VEHIWGIGSQYAALLHKQHIHTALDFADAPTHWVQKHLHITGARVQQELNGHSCLPLELV 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 KQ I SRSFG ++ Y + AI + + A KLR E ++ F+ TSPF Sbjct: 239 RSRKQSICTSRSFGSLVSSYEEIGYAIAHFTSTCAFKLRREGSRASLLTVFLYTSPFIEK 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL-- 358 E Y + + L P+ ++ ++ AA L +I+++G+ Y+KAGV++ + A + Sbjct: 299 ENRYRGTRTFALPFPSNNTLELQKAAQLLLASIYRSGYGYKKAGVLVSGITDEKGAAMTT 358 Query: 359 -NLFDDNAPRPGSE---QLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 +LFD++ + +LM +D +N++ G+GTL A W+ ++ LSP YTTR Sbjct: 359 LSLFDNDPLPRNQKRDMKLMETLDAINSRFGQGTLRTASD-TNSGWKQRQEKLSPHYTTR 417 Query: 415 SSDLLRV 421 +D++ + Sbjct: 418 WNDIIEI 424 >UniRef50_C3X802 DNA-directed DNA polymerase n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X802_OXAFO Length = 420 Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats. Identities = 174/418 (41%), Positives = 257/418 (61%), Gaps = 9/418 (2%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N F+ SCE VFRPDL GKPV+VLS+NDGC IAR+ EAKALG++MG+PWFK KDL Sbjct: 6 ALVDCNNFFVSCERVFRPDLEGKPVIVLSSNDGCAIARSNEAKALGIRMGEPWFKVKDLP 65 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 + VV FSSN+ LY+D+SNRV L + SP E+YS+DE+F DLTG D+ + Sbjct: 66 KYRDVVVFSSNFPLYSDLSNRVKYLLADFSPVQEVYSVDESFLDLTGFD---DVKERMVA 122 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV-DLSNLERQRKLMSALPV 181 IR TV +R + V VG+ TKTLAKLAN+ AKK R G ++ +++ L+ +P+ Sbjct: 123 IRETVAKRIGIPVCVGVGPTKTLAKLANYVAKKHPRSKGVFHYNVLTEQQKSGLLKQIPI 182 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 D+VWG+GRR+++ L + GI+TV L + DIR +R + VV+ER + ELRG C+ + + + Sbjct: 183 DEVWGVGRRLNRSLISRGIETVYQLREADIRTMRSRYGVVMERLISELRGISCIDMVDVS 242 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 P K++I+ SRSFG IT+ + AI +A + ++LR +H + F+ T F ++ Sbjct: 243 PPKKQILSSRSFGGVITEIDDLENAIAFHATKIGKQLRRQHSIAGMVHVFLMTDRFRKDK 302 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 P Y S+ L+ T + +I A L I++ G+ Y+KAG + + + V ++F Sbjct: 303 PQYHPHVSLPLIDATNSTIEINRYAMMGLHRIFRPGYEYRKAGACVSELSPESVFSPDMF 362 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA-GQGIQQQWQMKRAMLSPRYTTRSSDL 418 D ++M VMD +N + G GTL + + ++W+ K +SPRYTT +L Sbjct: 363 TDP----KRRKIMQVMDEINDRFGNGTLRLSQDDMMHRRWRPKVDRVSPRYTTSWDEL 416 >UniRef50_B2A8L2 DNA-directed DNA polymerase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A8L2_NATTJ Length = 408 Score = 328 bits (840), Expect = 3e-88, Method: Composition-based stats. Identities = 91/408 (22%), Positives = 171/408 (41%), Gaps = 27/408 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E P+L KPV++ + G V +A+ G+ P ++ + L Sbjct: 16 ILHIDMDAFYASVEKRDNPELEDKPVIIGGSRRGVVSTCCYKARKYGLHSAMPMYRAQRL 75 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFG 120 V + + Y +S + E +P VE S+DEAF D+TG N D + Sbjct: 76 CPHG--VYLRPDMDKYRRVSQEIKKIFLEFTPLVEPLSLDEAFLDVTGSLNLFGDAVNIA 133 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +I+ + + LT +G+A K +AK+A+ K + +++ ++ LP Sbjct: 134 EKIQTQISDQLQLTCSIGVATNKFIAKVASDLKKPAG------LTHVPTGKEQDFLAPLP 187 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADT-----DIRFIRKHFNVVLERTVRELRGEPCL 235 VD +WG+G + + ++ + G T+ +L +I + K FN+ E T+ +G Sbjct: 188 VDKLWGVGEKTTARIKSRGYHTIGELQQMLAKAQNINSLAKSFNIT-EDTLLLAKGYDDR 246 Query: 236 QLEEFAPTKQEIICSRSFGERIT---DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 ++ P + I ++F + +T Y + + ++ + +LR + ++ I Sbjct: 247 EVVPEEPP-KSIGQEKTFAQDLTAGSQYNQLIPHLLKFSEQVGARLRKAGYKGKTVTVKI 305 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGDFF 351 + S F + + QD ++I A L + + GV + + Sbjct: 306 RDSRFK------TWTKQKTVPETDQD-KEIYAHAQELLQNMNLKPSDEIRLLGVTVSNLV 358 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 S QL+L N +QL +D + K G + A Q+ Sbjct: 359 SSTQQQLSLDMSNEQYEKEQQLQWTLDEMREKFGDDAIRRARLIFPQE 406 >UniRef50_C6BW91 DNA-directed DNA polymerase n=4 Tax=Bacteria RepID=C6BW91_DESAD Length = 389 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 104/401 (25%), Positives = 168/401 (41%), Gaps = 20/401 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + P+L GKPV V S + + A + EA+ GV+ P + Sbjct: 5 IMHIDMDAFFASVEQLDNPELRGKPVGVGSMHERSVLSAASYEARKFGVRSAMPVRQALK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L + VV S + Y ++S +VM+ L SP VE SIDEA+ D+TG Sbjct: 65 LCPQLQVVSGSRH--RYKEISRKVMAALSNYSPIVEQASIDEAYIDITGTEKLFGTPLQI 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R I+A + + T LT VGIA K LAK+A+ K + E+ + + L Sbjct: 123 ARSIKADIRKATGLTASVGIAPVKFLAKIASDLNKPDGIS------IITAEQVQDFLKTL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV+ + G+G++ +L + GI DL F ++ F + G + E Sbjct: 177 PVEKIPGVGKKALPRLRSYGITYAADLRRYPPEFWKERFGERGLVLYEKGAGIDPTPVTE 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + +FGE ++D +++ + + R A +R R ++ +K F Sbjct: 237 GGAM-KSSSAENTFGEDVSDIHTLKTLLLKQSERIAADIRKHGVKGRTVTLKVKFPDFRQ 295 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S L + T + I A LDA G + GV + +F + Sbjct: 296 ------ITRSRTLDSRTSHAGTIYKTACSLLDAELPIG-PIRLIGVGISNFEERNRQLSL 348 Query: 360 LFDDNAPRP--GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 L D P+ EQL +D + K G+ L + Sbjct: 349 LDDPEKPKESKRLEQLDKAVDQVRLKFGKDILTRGRLLEDE 389 >UniRef50_A6ET82 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=4 Tax=Bacteroidetes RepID=A6ET82_9BACT Length = 421 Score = 324 bits (830), Expect = 4e-87, Method: Composition-based stats. Identities = 178/424 (41%), Positives = 258/424 (60%), Gaps = 5/424 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKAL-GVKMGDPWFKQK 59 M AL D N+FYASCE VFRPDLWGKPVVVLSNNDGC+IA N EAKAL + M +P FK K Sbjct: 1 MIALVDCNSFYASCEQVFRPDLWGKPVVVLSNNDGCIIAANREAKALTDIAMFEPVFKIK 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 V FSSNY LY ++S RVM+TL SPRVE+YSIDE+F DL G + +L + Sbjct: 61 KQLIAHNVTLFSSNYTLYGELSQRVMNTLYLFSPRVEVYSIDESFVDLHGFGHK-NLKHY 119 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G I+ T+ + T + GVGIA TK LAKLAN AKK + V + + ++ +++ Sbjct: 120 GNFIKETIFRNTGIPTGVGIAPTKVLAKLANKIAKK-GPEHDHVFVIDSDAKRIEILKTT 178 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + +WGIGR+ +KKL +GI T + + ++RK VV ER RELRGEPC+ + E Sbjct: 179 EIKSIWGIGRQQTKKLKEVGIHTAYQFTEMPLAWVRKEMTVVGERLWRELRGEPCMDMIE 238 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 K+ I ++SFG ++ + +A Y + AE LR++ ++ F+ TS F++ Sbjct: 239 IPKPKKGIGTAKSFGRKLERLDLIEEACAYYISEVAEVLRAQKSCAMYLQVFLNTSSFSV 298 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 N+ Y N +V L PT ++ ++ A + L AI++ G+RY+K GV L + Q N Sbjct: 299 NDKQYRNKQTVTLAIPTNNTFTLVTEARKILKAIYKPGYRYKKVGVNLTGIIPEAYVQGN 358 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ-QQWQMKRAMLSPRYTTRSSDL 418 LF ++ ++LM + DTLN K G+G ++ G + ++W++ +A SPR+TT+ S++ Sbjct: 359 LF-ESPKTEKHKELMQLFDTLNYKYGKGKVFSGLTGTRMKEWELVKADRSPRFTTQWSEI 417 Query: 419 LRVK 422 L VK Sbjct: 418 LEVK 421 >UniRef50_Q39ZU3 Damage-inducible protein DinP n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q39ZU3_PELCD Length = 399 Score = 324 bits (829), Expect = 5e-87, Method: Composition-based stats. Identities = 104/407 (25%), Positives = 168/407 (41%), Gaps = 19/407 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AFYAS E + P+L G+PVVV + G V A + EA+ G+ P + Sbjct: 10 IILHLDMDAFYASVEQLDSPELKGQPVVVGGHRSRGVVCACSYEARTFGIHSAMPMSRAL 69 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + + Y ++S +V + VE S+DEAF D+T R D Sbjct: 70 RLCPQ--AIVQPVRMARYQEISRQVFDIFGRYTDLVEPLSVDEAFLDVTASRRLFGEGWD 127 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +IR V L + GIA K LAKLA+ AK ER + + Sbjct: 128 IAEKIRRDVRDELGLPISAGIAPNKFLAKLASEQAKPDGVFQV-------PERVDDFLLS 180 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ +WG+G + K L MG++TV DL D + + F ER ++ GE +E Sbjct: 181 LPLKRLWGVGPVLLKSLQKMGLRTVADLRHMDRADMERCFGQAGERLIQLAHGEDERPVE 240 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I +F + I + +M A+ R A +LR ++ +K + F+ Sbjct: 241 PQRS-LKSIGHEDTFDQDIFERETMHVALLDLVERVAARLRKHGLIGTTLTLKVKYADFS 299 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S + +RD+++ A + L+ + GV L + Q Sbjct: 300 ------TVTRSRSVADGICHARDMLHLAKQLLEKTEAGKKPVRLLGVSLANLMDADSGQG 353 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 LFD+ R + L MD + + G L A ++ + R Sbjct: 354 LLFDE-DRRNQLKGLEQAMDHVRERYGEKGLCRATLVGHRRRSLTRE 399 >UniRef50_C6PAP1 DNA-directed DNA polymerase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PAP1_CLOTS Length = 414 Score = 323 bits (828), Expect = 7e-87, Method: Composition-based stats. Identities = 94/402 (23%), Positives = 174/402 (43%), Gaps = 19/402 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFKQ 58 D+NAFYASCE L GKPVVV + G V+ + EA+ G+K G P ++ Sbjct: 4 ILHIDMNAFYASCEQSKDKSLKGKPVVVAGDPSKRHGIVLTASYEARKYGIKTGMPNWQA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 + L + +++ Y S ++++ L+E SP VE +SIDEA+ D+TG + Sbjct: 64 RTLCND--AIFLKPDFDSYIQYSIKMINILKEFSPLVEQFSIDEAWVDVTGCEDLFGSPI 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + +I++ + L +GI++ K +AK+A+ K LE+ + ++ Sbjct: 122 EIAHKIQSRIKDSLDLPCSIGISENKLVAKMASELKKPLGI------TELPLEKIKDMIW 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V+++ IG SKKL + GI T+ DLA+T + F+ F + G + Sbjct: 176 PLDVENLIWIGSARSKKLKSFGINTIGDLANTPMTFLINLFGKPGKDIYYFANGIDLSPV 235 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 +A T + + + TD +++ S + ++R ++ + +S +K + F Sbjct: 236 RPYAITAKSFGNTITLPRDYTDIEDIKRGFLSLSEMVGSRMRKQNFMGKTVSITVKDNNF 295 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S + T + DI NAA + + + + GV + + Sbjct: 296 K------SITRSRTI-DYTVLTEDIFNAAMKLFKENYDTNFKIRMLGVSVSNLVKIDENI 348 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 NA ++L +D + K G ++ ++ Sbjct: 349 QLCLFQNAKYENLKKLNYAIDMIRDKYGFDSISRGLILTGEK 390 >UniRef50_C6BX75 DNA-directed DNA polymerase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BX75_DESAD Length = 423 Score = 322 bits (825), Expect = 1e-86, Method: Composition-based stats. Identities = 173/423 (40%), Positives = 247/423 (58%), Gaps = 5/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FY SCE +FRP++ +PVVVLSNNDGCVI+R+ EAK +GV MG P +K + Sbjct: 3 IFALVDCNNFYVSCERLFRPEIKHRPVVVLSNNDGCVISRSQEAKDIGVPMGAPAYKYQS 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 F + V FSSNY LY D+S RV +TL L+P +E+YSIDE+F + R+L G Sbjct: 63 FFLQNNVEIFSSNYALYGDLSQRVTATLASLTPDLEVYSIDESFLEF-PPCMLRELPSIG 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +EIR +L+ T + V VG TKTLAK+A+ AKK+ + G L +L+ +P Sbjct: 122 KEIRTRILKWTGIPVSVGFGSTKTLAKVASRFAKKYPQT-EGTFSLCGRNDLDRLLDKVP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V DVWGIGRR K+L A G+ T D +++K+ +V T ELRG PC +L+ Sbjct: 181 VTDVWGIGRRHGKRLIARGVSTARTFKDLPNLWLKKNMSVTGLHTALELRGTPCFELDNS 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I SRSFG +T + +++ +Y ARA EKLR + + ++ T+ F N Sbjct: 241 PKPKKTISSSRSFGRPVTALSDLEESVAAYVARAGEKLREQQSLTNGVMVYLTTNRFN-N 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y NSA+ L T + ++IN + + +I++ G Y+K GV+L D + Q NL Sbjct: 300 LPQYSNSATRMLPIATDYTPELINTGLQCIRSIYKEGFSYKKTGVVLLDLCGKYNRQCNL 359 Query: 361 --FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 D A E +M ++D+ N + GR TL +A +G++Q WQM R SP YTT DL Sbjct: 360 LELDHKAESAKKEAIMNLLDSANTRFGRRTLSYASEGLEQPWQMNRKYKSPSYTTSWDDL 419 Query: 419 LRV 421 ++ Sbjct: 420 PKI 422 >UniRef50_C8X3R0 DNA-directed DNA polymerase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X3R0_DESRD Length = 397 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 92/399 (23%), Positives = 162/399 (40%), Gaps = 17/399 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E P+L G+PV+V G V A + EA+ GV+ P + + L Sbjct: 5 ILHVDMDAFFASIEQQDYPELQGRPVIVGGGERGVVSAASYEARRFGVRSAMPISQARKL 64 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-DFG 120 ++ Y ++S +VM+ L+ SP VE SIDEA+ D+TG + G Sbjct: 65 CPNGN--FCHGRHKRYKELSRQVMTVLDGFSPCVEQASIDEAYLDITGTERLLGPPGEVG 122 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R ++ + RT L+ +GIA K +AK+A+ K G + E+ + + LP Sbjct: 123 RALQQAIRVRTGLSASIGIAPNKFVAKIASDWDKP------GGLTWIRAEQLQTFLDKLP 176 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V + G+G R S L+ +G+++V + F ++ G +++ + Sbjct: 177 VRKLPGVGPRTSALLERLGVESVGAVRRFSEAFWTDRLGEGGKQLWARAHGIDDSEVQPY 236 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + + D + + A R +LR E ++ I+ F Sbjct: 237 HAP-KSCGAEHTLPQDTEDEAILISWLLHEAERIGRELRREVMEAGTVTLKIRYDDFT-- 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + KL PTQ ++D+ +A L + G+ G+ G + L Sbjct: 294 ----TFTRCRKLSPPTQSTQDLYSAGVTLLRQQQLQ-RPVRLVGLSAGNLAPMGSGRRQL 348 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 A L MD + + G ++ A Q+ Sbjct: 349 SFFEADSARRNSLDAAMDAVRERFGGTSVRRAEILRAQE 387 >UniRef50_A9E9W4 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Kordia algicida OT-1 RepID=A9E9W4_9FLAO Length = 421 Score = 322 bits (824), Expect = 2e-86, Method: Composition-based stats. Identities = 177/421 (42%), Positives = 256/421 (60%), Gaps = 4/421 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL DVN Y SCE VF P L GKPVVVLSNNDGCVI+R+ EAK LG+ MG + Sbjct: 1 MYALVDVNNMYCSCERVFNPKLIGKPVVVLSNNDGCVISRSNEAKKLGIPMGAVTHLFEK 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 +F+ V +SSNYELY D+S+R+M L + +P +E+YSIDEAF G + DL D G Sbjct: 61 IFKDHHVQVYSSNYELYGDLSDRLMHVLSKFTPDIEVYSIDEAFLQFKGFEH-FDLNDLG 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 EI+ T+LQ L + +GIA TK LAK+AN AKK+ ++TGGV + + +++K ++ L Sbjct: 120 IEIKETILQYIGLPISIGIAPTKALAKVANRIAKKFDKKTGGVYVMDSEHKRKKALNWLS 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++DVWGIGRR + KL+ GI + AD ++RK F+VV R ++L+G P L LEE Sbjct: 180 IEDVWGIGRRNASKLNRYGITKAIQFADAPDNWVRKEFSVVGLRLKKDLQGIPTLSLEEV 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I +RSF + + +++ I SY A+EKLR + C I F+ ++ F + Sbjct: 240 ES-KKSIAVTRSFAKTKNNLQDLKEIIASYGCVASEKLRVQKSCCNLIMVFVHSNRFRKD 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y NS VKL T S I A +++ +I++ G+ ++KAG+M+ QLN+ Sbjct: 299 LPQYNNSLVVKLPYSTNSSLIIAKYAKKAIQSIFKKGYEFKKAGIMVMGLVPDNAQQLNM 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F+ A +QLM+ +D LN+K G+ TL A Q + W M++ LS YTT +D+L Sbjct: 359 FE--ACNSDHKQLMSTIDRLNSKYGKNTLNIASQKLDSSWAMRQNNLSQNYTTDFNDILV 416 Query: 421 V 421 + Sbjct: 417 L 417 >UniRef50_Q0VP68 DNA-damage-inducible protein n=4 Tax=Proteobacteria RepID=Q0VP68_ALCBS Length = 428 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 206/431 (47%), Positives = 276/431 (64%), Gaps = 12/431 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N+FYA+CE +FRPDL G+PVVVLSNNDGC++A +AEAKALGVK G P F+ D Sbjct: 1 MFALVDCNSFYAACERLFRPDLQGRPVVVLSNNDGCIVAGSAEAKALGVKTGMPLFQAHD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L R V FSSNY LY D+S RVM+TLE L+PRVE YSIDEAF D++ + +L Sbjct: 61 LIRGHKVAVFSSNYALYGDISQRVMATLETLAPRVEAYSIDEAFLDVS-LMKTAELQPLA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +IRA + + + V VG+A TK LAKLANHAAK++ TGGVV LS+ R+ KL+S P Sbjct: 120 LQIRARIDRWVGVPVCVGVAPTKVLAKLANHAAKRYP-ATGGVVVLSDPLRRDKLLSLTP 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + VWG+GRR+ + +A+GI T LDLA D+ IR+ F+VV ER VREL GEPCL L+ Sbjct: 179 ISQVWGVGRRLRGRFEALGINTALDLARADVGMIRQRFSVVQERLVRELNGEPCLSLDTQ 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +Q++I SRSFGE + P +RQA+ + +RA E LR E Y ++ +++T+P Sbjct: 239 PSPRQQVIYSRSFGEPVAALPPLRQALSDFVSRAMESLRKEGLYAGRVTVYLRTAPMGKP 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + + ++ S L T D+R ++ A L +W G+RY KAGV+L D + Q L Sbjct: 299 QQLFPDTLSAVLSPATADTRLVVRQAQALLAQLWWPGYRYGKAGVILTDLRGRDQVQCGL 358 Query: 361 FDDNAPRPGS-----EQLMTVMDTLNAKEGRGTLYFAGQGIQQ----QWQMKRAMLSPRY 411 F + P E LM VMD++N G G ++ AG+G+Q W M+RA LSP Y Sbjct: 359 FAEQKPAEQETGRRGEALMAVMDSINQS-GVGKVWLAGRGMQGNQHSTWAMRRAHLSPAY 417 Query: 412 TTRSSDLLRVK 422 T+R SDL V+ Sbjct: 418 TSRWSDLPVVR 428 >UniRef50_A0LG84 DNA-directed DNA polymerase n=4 Tax=Deltaproteobacteria RepID=A0LG84_SYNFM Length = 425 Score = 321 bits (822), Expect = 3e-86, Method: Composition-based stats. Identities = 96/396 (24%), Positives = 167/396 (42%), Gaps = 19/396 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E RP+ GKPV+V G V A + EA+ GV P F+ K L Sbjct: 37 IMHVDMDAFYASVEQADRPEFKGKPVIVGGARRGVVSAASYEARRFGVHSAMPVFQAKRL 96 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFG 120 + Y ++S VM L +SP VE SIDEAF D+TG G Sbjct: 97 CPGG--IFLPVRMGRYKEVSKVVMDILCGISPLVEQISIDEAFVDITGTEALHGSPESLG 154 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R +++ + T +T VGIA K +AK+A+ K + + +R ++ LP Sbjct: 155 RRVKSQIRAATRVTCSVGIAPGKFVAKIASDIHKPDG------LTIVEDDRVEAFLAPLP 208 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ + GIG++ S+ L ++G++ + D+ F K + RG + + Sbjct: 209 VERIPGIGKKTSEALRSLGVRAIGDVLRFPASFWVKRLGAWGVKLHERARGVDPAPVIAY 268 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + +F E + D ++ + + + ++LR E R ++ +K + F+ Sbjct: 269 S-QAKSCSAEDTFPEDVDDVETLEKWLFVQSEEVGKELRRESFRGRTVTLKVKFADFS-- 325 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S L T ++ I A+R L A+ + GV + + + + Sbjct: 326 ----SITRSHTLREATDCTQLIFGTASRLLRALKLNRK-VRLVGVGVSNLSAMPEQKP-- 378 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 ++ +L MD ++ + G G L Sbjct: 379 VFSDSMLVRQRKLDRAMDRIHERFGHGALRRGRVLG 414 >UniRef50_Q11QJ9 Nucleotidyltransferase/DNA polymerase involved in DNA repair/SOS mutagenesis and repair n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11QJ9_CYTH3 Length = 419 Score = 321 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 179/422 (42%), Positives = 248/422 (58%), Gaps = 9/422 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL D N FY SCE VFRPDL +PVVVLSNNDGCVI+R+ EAKA+GVKMG+P+FK K+ Sbjct: 1 MYALIDCNCFYVSCERVFRPDLRQQPVVVLSNNDGCVISRSDEAKAIGVKMGEPFFKMKE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L R V FSSNY LY D+S+RVM TL + P +E+YSIDEAF L DL G Sbjct: 61 LVRNGKVTAFSSNYTLYGDLSDRVMKTLASIVPDIEVYSIDEAFLHLNESHT--DLETLG 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR TV Q T + VGVGIA TKTLAKLAN +KK G V + + ++ ++A Sbjct: 119 HTIRNTVKQHTGIPVGVGIAPTKTLAKLANRLSKK-----TGGVHIIYPDNIQEKLNACA 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + DVWGIGRR +K+L A + T+ + ++R+HF+V+ RT +EL+G PC+ +E+ Sbjct: 174 LQDVWGIGRRNAKRLQANYVDTIEQFVNQREEWVRQHFSVIGLRTYKELKGIPCIDMEDE 233 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I SRSFGE + S+++AI ++AA AEKLR + + + S F Sbjct: 234 LTEKKSICTSRSFGELQNTFASIQEAIATHAASCAEKLRKQKCAAAGMYVSLSKSRFTDQ 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E +KL T ++ +I A++ L+ +++ Y+K GV + D + QLNL Sbjct: 294 EGDKYFGTYIKLPQATNNTATLIQYASKGLELLFKKDVYYKKCGVTVIDIVPEEKIQLNL 353 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ-QQWQMKRAMLSPRYTTRSSDLL 419 F + L +D LN K G+ L A QG W+++ +SP YTTR ++L Sbjct: 354 F-EPQKNARLHALEDTIDKLNQKLGKNVLRQAIQGNDNNTWKLRCENMSPNYTTRIGEIL 412 Query: 420 RV 421 V Sbjct: 413 VV 414 >UniRef50_C7RB82 DNA-directed DNA polymerase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB82_KANKD Length = 422 Score = 320 bits (821), Expect = 5e-86, Method: Composition-based stats. Identities = 168/420 (40%), Positives = 252/420 (60%), Gaps = 6/420 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 +ALCDVN+FY SCE +FRPDL+GKPV+VLSNNDGC+IA + EAKALG+ M P+ + + + Sbjct: 8 YALCDVNSFYVSCERMFRPDLYGKPVIVLSNNDGCIIALSDEAKALGIPMAAPYHEARPI 67 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 ++ V CFSSNY LY D+S R LE+ +V YS+DE+F G +N DLT + Sbjct: 68 IQKHKVTCFSSNYGLYGDISKRFNWILEQHCDQVAPYSVDESFMRFEGFQN--DLTQRAQ 125 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 IR+ + + L V +G+ TKTLAK+ANH AKK + T GVVDLSN ++ + + V Sbjct: 126 AIRSELWRCLSLPVCIGLGPTKTLAKVANHFAKKHKTTTHGVVDLSNPATRKWALKQIAV 185 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +WGIGR++SKKL I T DL + D + +++ F+V +ERT+ ELRG+PCL+ E Sbjct: 186 AKIWGIGRQLSKKLILQDIHTAWDLHNADYKTLQRMFSVNMERTILELRGQPCLKFSELP 245 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 K+ I+ SRSFG+ ++ Y +++A+ + +R EKLR++ I+ F+ Sbjct: 246 EPKKSILNSRSFGKPLSIYSDLKEAVAHHTSRCCEKLRNQSSLASSITVFL-YGQRKELV 304 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 + S +++L PT D+ + A + L I +AG Y+KAG+ML Q ++F Sbjct: 305 YHNRPSVTLQLPEPTDDTSIFLQAVEQGLRHIVKAGESYKKAGIMLNGIVDSHGYQPDIF 364 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 P +LM +D +N + G+ T+ F G + W M+ SP YT+R D+L++ Sbjct: 365 ---EGVPQRPELMESLDKINRRYGQDTVKFGSLGFAKNWAMRANSCSPHYTSRWQDILKL 421 >UniRef50_C0QCD0 UmuC1 n=3 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCD0_DESAH Length = 422 Score = 320 bits (820), Expect = 5e-86, Method: Composition-based stats. Identities = 175/423 (41%), Positives = 238/423 (56%), Gaps = 6/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FY SCE VF P L GKPV+VLSNNDGC +AR+ EAKALG+ MG P+F+ K Sbjct: 3 VFALVDCNNFYVSCERVFNPQLVGKPVIVLSNNDGCAVARSNEAKALGIAMGAPFFQIKA 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + GV FSSNY LY DMSNRVM TL +P +EIYSIDEAF DLT DL ++ Sbjct: 63 IVEGNGVRVFSSNYPLYGDMSNRVMQTLAPFTPAMEIYSIDEAFLDLTNFA-FTDLVNYA 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R++R TV + T + V +GIA TKTLAK+AN AKK + GV+DL+ + + P Sbjct: 122 RKMRNTVQRNTGIPVSIGIAPTKTLAKIANRIAKK-SSKADGVLDLTPTSYRDLALEMTP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + DVWGIGRR++ GI+T LD IR + R REL GE C LE+ Sbjct: 181 IGDVWGIGRRLTPFFKYRGIRTALDFKSAAPSLIRGKMGINGIRMQRELAGESCYPLEDC 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ + SRSF T + + QA+ Y +R AEKLR + + ++ ++ T+ F+ Sbjct: 241 PARRKSVAVSRSFKTPATTFDELSQAVSLYISRGAEKLRHQGSFTETLTVYVMTNRFSPQ 300 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 YY S + L T + + ++I L I+Q+G Y KAG++ G QL+L Sbjct: 301 SYYYN-SKTAVLPTASNSTPELIKQGKGLLKQIFQSGKYYTKAGIVFSSLTRDGQVQLDL 359 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG--IQQQWQMKRAMLSPRYTTRSSDL 418 FD S+ LM MD +NA+ G + +A G W+ + SP YTT + L Sbjct: 360 FDTTDRS-RSDNLMQAMDKINARMGSHAVRYAAMGLSGHPSWKGACSHRSPAYTTEWNQL 418 Query: 419 LRV 421 L + Sbjct: 419 LNI 421 >UniRef50_B8CWI6 DNA-directed DNA polymerase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWI6_HALOH Length = 385 Score = 320 bits (820), Expect = 6e-86, Method: Composition-based stats. Identities = 84/399 (21%), Positives = 158/399 (39%), Gaps = 22/399 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFKQ 58 D++AF+AS E + P+ KPV+V N G V + EA+ GVK + Sbjct: 5 IMHVDMDAFFASVEQLDNPEFRRKPVIVGGIDLENRGVVSTASYEARKYGVKSAMSVVEA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT- 117 + L + + Y ++S ++ +P VE SIDEAF DLTG + Sbjct: 65 RRLCPEG--IFVKGRHSRYREISEKIFRIFNTYTPLVEKVSIDEAFLDLTGCHRLFGSSV 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + G++I+ + ++ LT +G++ K LAKLA+ K + + K+++ Sbjct: 123 EIGKKIKNKIKEQLGLTASIGLSYNKFLAKLASGMDKPDG------FFIIDDNNVDKILN 176 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V +VWGIG++ + L + GIKTV L ++ + RG + Sbjct: 177 KLCVGEVWGIGKKTEQLLLSKGIKTVGMLRHLSKSDLKGILGKQGLQLYYLARGIDDRHV 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E + + I +F + + D + + + + R A +LR + ++ + Sbjct: 237 EPGSDI-KSISHEETFSDDLIDPDEVMSHLMNMSERVARRLRKNCLKGSTVFIKVRYNN- 294 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + + D+ I + + G+ + + Q Sbjct: 295 -----RVTLTRRTTIKEYVDDTDSIYRTGLLLIKKHNLLSKPIRLLGIGMANLTDNNGIQ 349 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 L+LF D R ++L + +D + + G ++ Sbjct: 350 LSLFTD---RVRKKRLTSTIDKIKDRYGEKSITRGRNLT 385 >UniRef50_C6M791 Protein UmuC n=2 Tax=Neisseria RepID=C6M791_NEISI Length = 423 Score = 320 bits (820), Expect = 6e-86, Method: Composition-based stats. Identities = 180/423 (42%), Positives = 246/423 (58%), Gaps = 9/423 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N+FY SCE VFRP+L PVVVLSNNDGCV+AR+AEAKALG+KMG+P+F+ K Sbjct: 8 MFALIDGNSFYCSCERVFRPELKNVPVVVLSNNDGCVVARSAEAKALGIKMGEPYFRVKH 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + FSSNYELYAD+S R+M T+ P VEIYSIDE F + N D G Sbjct: 68 LVSQGRLKAFSSNYELYADLSRRMMETIAGCVPAVEIYSIDECF---ATMANIGDHAGLG 124 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER--QRKLMSA 178 REIR VLQ + VGIA TKTLAK N+ AKK+ GGVV ++ + + + + Sbjct: 125 REIRRRVLQWVGIPTCVGIAPTKTLAKFCNYLAKKYPSHFGGVVVWTDWTESIRLRALRS 184 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 V ++WGIG +I+ KL A GI T LD D +R + V +ERT RE++G C L Sbjct: 185 EAVSEIWGIGNKIAAKLAAQGIFTALDFVLADTATLRLRYGVTIERTQREMQGIVCDGLH 244 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 KQ ++ SRSFG RI +++ AI + + AE LR + +S F+ T F Sbjct: 245 PKPAPKQNLVRSRSFGVRIDTLDALQAAITHHISSGAETLRKDKLTASSVSVFLHTDFFK 304 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 +EP Y NS ++ L+ PT D+ + +AA + L I+++G+ Y+K G+ L Q Sbjct: 305 ESEPQYHNSQTISLIVPTSDTVLLNHAAQKILATIFRSGYLYKKCGIELHGLKPAEQIQA 364 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 +L+ P +M D +N + G+G L A + + W+M R LS YTTR +DL Sbjct: 365 DLWQSVTNNP----VMEAWDKINRQYGKGRLKLASELLANNWEMNRDRLSQCYTTRFTDL 420 Query: 419 LRV 421 V Sbjct: 421 PIV 423 >UniRef50_C6CYA7 DNA-directed DNA polymerase n=3 Tax=Bacillales RepID=C6CYA7_PAESJ Length = 422 Score = 320 bits (819), Expect = 7e-86, Method: Composition-based stats. Identities = 91/424 (21%), Positives = 163/424 (38%), Gaps = 21/424 (4%) Query: 1 MFALCDVNAFYASCETVFRPD-LWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWF 56 + D+NAFY S P+ GKP V + G ++ + A++ G+K G Sbjct: 14 VILHLDMNAFYCSVHEAEEPEKYKGKPTAVAGSVELRKGIIVTCSYAARSKGIKTGMTVR 73 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + + ++ ++ELY S M E +P VE SIDE + D+TG + Sbjct: 74 QAMRMCP--NLIIIQPDFELYRKYSRGFMKIAREYTPLVEPISIDECYMDITGSKIFGSP 131 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + ++ + + L +G+A K LAK+A+ K + + L ++ Sbjct: 132 LEIAEALQKRIAEEWTLPCSIGVAPNKLLAKMASDMKKPNG------LTVLRLRDVPTIL 185 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 P D + G+G++ + KL+ + I+T+ LA D + + F + G + Sbjct: 186 WDKPCDVLHGLGKKTADKLERLRIRTIGQLAAADEELLIRQFGIYGSWMKSAAHGIDHSE 245 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + I + + +TD + + + A + A +LR + + I+ Sbjct: 246 VRADREQSKSIGHTTTLPYDVTDREDAHRILLNLADQTARRLRRQKLMASTVQITIRKPD 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF--FSQG 354 + S L PT + I + A R D W+ + GV L + + Sbjct: 306 ------MATITRSSTLRAPTHSTDMIYHEACRLFDEHWKGSEPARLLGVTLQNLTAEEET 359 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 QL+LFD E L MD L K G + AG + R + + Sbjct: 360 AVQLDLFDYKEQPRK-EALTKTMDVLRDKFGENAVLTAGMLGDDPSVLIRNKRLRGTSLQ 418 Query: 415 SSDL 418 +L Sbjct: 419 KDEL 422 >UniRef50_Q2W5K5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=6 Tax=Proteobacteria RepID=Q2W5K5_MAGSA Length = 425 Score = 320 bits (819), Expect = 9e-86, Method: Composition-based stats. Identities = 171/423 (40%), Positives = 237/423 (56%), Gaps = 2/423 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D N FY SCE F P L GKPV+V+SNNDGC +AR+AEAKA+GV MG+P FK + Sbjct: 3 VYALVDCNNFYVSCERAFNPALEGKPVIVMSNNDGCAVARSAEAKAIGVGMGEPAFKLRH 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L G++ SSNY LY DMS RVMS L SP EIYSIDE F DL G+ +LT + Sbjct: 63 LVDSHGLIMLSSNYALYGDMSERVMSVLATFSPGAEIYSIDECFLDLDGMPVD-NLTAWS 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +++RATV + T + V VGI TKTLAKLAN AKK ++ G + + + P Sbjct: 122 QQVRATVRRWTGIPVSVGIGTTKTLAKLANRLAKKSKKANGVLDLSRDARWIEAALKQTP 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V DVWGIGR+ + GI+T DL +I+K V RTV ELRG P L+ Sbjct: 182 VGDVWGIGRQYAALCGVNGIRTAFDLTLQPDGWIKKTMGAVGLRTVMELRGTPVHTLDTA 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K CSRSFG +T++ + A+ ++A+RAAEK+R E + F T F + Sbjct: 242 PSDKHTTCCSRSFGASVTEFEQVHDAVMTFASRAAEKIRGEGLVSGAVQVFAYTDRFRPD 301 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 +P + ++ ++L PT + II AA + L + W+ G+ Y+KAGV++ D +L Sbjct: 302 QPQFSLNSMIRLSPPTSSTPHIIGAALKGLKSAWRDGYEYKKAGVIMLDLVRPEDIPRDL 361 Query: 361 FDDNAPR-PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 F LM +D +N K G+G + F W+M+ + +P +TT D+ Sbjct: 362 FSPPPESGARPTALMAAVDGINGKMGKGAVGFGLVPDDAPWKMRCSNRTPSFTTSWDDIP 421 Query: 420 RVK 422 VK Sbjct: 422 VVK 424 >UniRef50_A5Y0S5 UmuC-like protein n=9 Tax=Proteobacteria RepID=A5Y0S5_ACIBA Length = 425 Score = 319 bits (817), Expect = 1e-85, Method: Composition-based stats. Identities = 186/425 (43%), Positives = 245/425 (57%), Gaps = 10/425 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FY SCE VF+P L GKPV++LSNNDGC +AR+ EAKALG+KMG P FK ++L Sbjct: 5 IALIDGNNFYVSCERVFQPHLLGKPVIILSNNDGCAVARSEEAKALGIKMGAPLFKIREL 64 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + GV SSNY LY DMS RV+ + + SP EIYSIDE F DL+G + Sbjct: 65 VKEHGVKVLSSNYTLYGDMSRRVVDAVSQFSPHYEIYSIDENFVDLSGFGDRY--EAIAV 122 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 ++RATV Q T + VGIA+TKTLAKLAN AAKK GGV D + + +PV Sbjct: 123 DMRATVRQVTGIPNCVGIAETKTLAKLANFAAKKNPIF-GGVCDFTQPAVLAWCLDRIPV 181 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +VWGIGR+ KL + GI T L D R+ VVLERTV EL+G CL++E+ A Sbjct: 182 AEVWGIGRQTQIKLASQGIATAAQLRDMPRTLARQLGTVVLERTVAELQGIRCLEIEDIA 241 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 P ++ + +RS G + D ++ QA+ ++A+RAAEKLR I+ F T+ F+ N Sbjct: 242 PQRKGMAVTRSAGAPMRDLEAVMQALTAHASRAAEKLRLHGLVAGQITAFFHTNSFSKNA 301 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA-----GHRYQKAGVMLGDFFSQGVA 356 + S +VKL T ++ D++ A R A W G+ Y KAGVML D A Sbjct: 302 AQHSVSRTVKLKPMTNNTFDLVQAVNRCARAGWHPKAHEHGYSYTKAGVMLDDLLKAEDA 361 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSS 416 LFD P +LM MD +N + G+ + QG Q + + K M SPR+TTR S Sbjct: 362 PKMLFDIVQ--PRDARLMEAMDAINDRYGKRKVVIGAQGFQNKHEAKADMRSPRFTTRLS 419 Query: 417 DLLRV 421 DL + Sbjct: 420 DLPVI 424 >UniRef50_P07375 Protein mucB n=137 Tax=root RepID=MUCB_ECOLX Length = 420 Score = 319 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 234/421 (55%), Positives = 278/421 (66%), Gaps = 4/421 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL DVN YASCE FRPDL + V VLSNNDG ++ARN AK G+KMGDP+FK + Sbjct: 1 MFALIDVNGMYASCEQAFRPDLANRAVAVLSNNDGNIVARNYLAKKAGLKMGDPYFKVRP 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + R + FSSNY LYA MS R + +E L+ VE YSIDE F D G+ L FG Sbjct: 61 IIERHNIAIFSSNYTLYASMSARFAAVVESLASHVEQYSIDELFVDCKGITAAMSLDAFG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R++R V + T L GVGIA+TKTLAKL NHAAK W TGGVV L + R +KLMS LP Sbjct: 121 RQLREEVRRHTTLVCGVGIARTKTLAKLCNHAAKTWP-ATGGVVALDDGARLKKLMSILP 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWG+G R K L MGIKTVLDLA D R IRK F VVLERTVRELRGE C LEE Sbjct: 180 VAEVWGVGHRTEKALATMGIKTVLDLARADTRLIRKTFGVVLERTVRELRGEACFSLEEN 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P KQ+I+ SRSFG+R+ M+QA+ +AARAAEKLR+E QYCR IS FI+TSP+++ Sbjct: 240 PPAKQQIVVSRSFGQRVETLTDMQQAVTGFAARAAEKLRNERQYCRVISVFIRTSPYSVR 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + Y N A+ KL TQDSR II AA IW+ Y KAGVML DF S AQL+L Sbjct: 300 DTQYANQATEKLTVATQDSRTIIQAAQAL-ARIWREDIAYAKAGVMLADF-SGKEAQLDL 357 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 FD P GSE LM V+D +N + G+ L+FAGQGI + M+R MLSP YTT + Sbjct: 358 FDSATPSAGSEALMAVLDGINRR-GKNQLFFAGQGIDNSFAMRRQMLSPDYTTDWRSIPI 416 Query: 421 V 421 Sbjct: 417 A 417 >UniRef50_C0VGI8 Nucleotidyltransferase/DNA polymerase n=4 Tax=Acinetobacter RepID=C0VGI8_9GAMM Length = 432 Score = 318 bits (815), Expect = 2e-85, Method: Composition-based stats. Identities = 169/426 (39%), Positives = 247/426 (57%), Gaps = 6/426 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL DVN Y SCE VF P L +PVVVLSNNDGCV++R+ EAK LG++M P+F+ ++ Sbjct: 7 IFALVDVNNAYVSCERVFNPKLENRPVVVLSNNDGCVVSRSYEAKQLGIRMAVPFFQIEE 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRDLTD 118 + R+ V FSSNY LYA+MS R M+ L E+YSIDE F +LT ++ DL+ Sbjct: 67 IIRQHHVAVFSSNYALYAEMSRRFMNILASFVDPCEQEVYSIDECFLELTAYQHHYDLSK 126 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS-NLERQRKLMS 177 + +I +TV + L +GI +KT AKLANH AK G + + L+ Sbjct: 127 YAFQILSTVKKWLGLPCCIGIGYSKTQAKLANHLAKTHASFNGVCNFVDEDPCIIEDLLM 186 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 PV +VWG+GR+I ++L+ M I +V+DL TD + + KHF+VVLE TV+EL+G CL++ Sbjct: 187 HTPVGEVWGVGRKIRQRLEKMNIYSVMDLLQTDPKRMGKHFSVVLENTVKELQGVACLEI 246 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E+ +Q+I+ SRSFG+ I D S+ A+ +A RA E+LR + C+ + I+T+ F Sbjct: 247 EDVISDRQQILSSRSFGQPIEDKNSLSGALTEFALRAVERLRKQKLLCKAVGISIRTNRF 306 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + Y + V L+ + D I+ A + LD I+Q GHRY+KA V+L D Q Sbjct: 307 NKDAYYRPFTV-VYLVDYSDDRLVIMKAVQQGLDRIYQVGHRYKKAEVILLDIIPQHRHA 365 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI--QQQWQMKRAMLSPRYTTRS 415 ++LF + + L D +N + GR + F + W M + SP Y T+ Sbjct: 366 VDLFYNTEEMLTRQNLSVAFDEINERFGRDVMTFGRLIGPQGRAWGMTQNHKSPSYLTKW 425 Query: 416 SDLLRV 421 D+LRV Sbjct: 426 EDVLRV 431 >UniRef50_C6XDV2 DNA-directed DNA polymerase n=2 Tax=Methylovorus sp. SIP3-4 RepID=C6XDV2_METSD Length = 430 Score = 317 bits (812), Expect = 5e-85, Method: Composition-based stats. Identities = 196/424 (46%), Positives = 266/424 (62%), Gaps = 5/424 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKAL-GVKMGDPWFKQK 59 +FAL D N+FYASCE VFRPDL GKPVVVLSNNDGCV+A++ EAKAL + M PWF+ + Sbjct: 10 VFALADANSFYASCEKVFRPDLEGKPVVVLSNNDGCVVAQSKEAKALLKLWMCRPWFEIE 69 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 + R GVV FSSNYELYA+MSNR M+TL + SPR E+YSIDE+F ++TG+ +LTD+ Sbjct: 70 EEALRLGVVPFSSNYELYANMSNRFMTTLRQFSPRQEVYSIDESFLEMTGINR--NLTDY 127 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG-GVVDLSNLERQRKLMSA 178 G+EI+ TV T L + VG +KTLAKLANH AKK + G + + ++ Sbjct: 128 GQEIKRTVKDWTGLPICVGFGHSKTLAKLANHCAKKQPQWEGVCDLTALSERELEAILEQ 187 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPVD VWG+GRR+ L +G++ VL L D + +R F VVLERTVREL GE +++E Sbjct: 188 LPVDTVWGVGRRLQASLATVGVENVLRLKRADPKRVRDKFGVVLERTVRELNGEVLIEME 247 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E P ++++ SRSFG R+ + +AI +A+ A+++LRS+ Y + FI+ SPF Sbjct: 248 EMVPEAKQVMSSRSFGARVHQLKDLEEAISYHASNASQRLRSKGLYANAVYIFIQNSPFD 307 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 E YYG S +V L PT ++ I AA L I++ G YQKAGVML + Q Sbjct: 308 KAE-YYGPSCTVALPCPTDNTLQINKAALWLLKRIYRPGIYYQKAGVMLMGLVPKEGQQQ 366 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 L + P S+ LM +D +N K +G L A +G+ + W M+R SP YT +L Sbjct: 367 ELLGYSEATPKSQALMETLDRINHKYSKGALKVASEGMAKLWAMRRNFKSPNYTGDWEEL 426 Query: 419 LRVK 422 +VK Sbjct: 427 GKVK 430 >UniRef50_A5FIG7 DNA-directed DNA polymerase n=10 Tax=cellular organisms RepID=A5FIG7_FLAJ1 Length = 446 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 172/422 (40%), Positives = 254/422 (60%), Gaps = 4/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FYASC+ VF P L KP+V+LSNNDGCVI+R+ EAKALG+ M P FK + Sbjct: 28 MFALVDCNNFYASCQRVFEPHLREKPIVILSNNDGCVISRSDEAKALGIPMAIPAFKYES 87 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 +F+ + +SSNY LY DMSNRVM+ L +P +EIYSIDEAF +G D+ G Sbjct: 88 VFKEKNIFVYSSNYPLYGDMSNRVMNLLRTYTPEIEIYSIDEAFLKFSGYD-LFDMNTLG 146 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++R V Q T + V +G A TK LAK+AN A+K+ +T V + + E++ K + Sbjct: 147 LKMRKEVTQGTGIPVSIGFASTKALAKMANKIARKFADRTQNVHCIDSEEKRVKALKWSK 206 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++DVWGIGR+ +K+L A I T + ++RK +VV R EL G+P L+LEE Sbjct: 207 IEDVWGIGRKHAKRLKAKKINTAYEFTQLPDAWVRKEMSVVGLRLKHELEGKPTLELEEA 266 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A ++ I +RSF +R T Y + + I ++ A AEKLR ++ +C ++ FI+TS Sbjct: 267 AD-RKMIATTRSFEKRYTSYEEISERISTFTASCAEKLRRQNCHCNMVTVFIQTSFIKNE 325 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E +Y S ++ PT + ++ AA + AI++ G+RY+KAGV++ QLNL Sbjct: 326 ESHYSRSITITTDFPTNSTIELNAAAQKGFKAIFKKGYRYKKAGVIVMGLTPNSETQLNL 385 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F+ P + LM+V+D +N G + F Q + +QW+MK+ LSP+++T D++ Sbjct: 386 FE--TSNPKHQPLMSVIDKMNQNYGNNKIKFGVQSLGRQWKMKQNRLSPKFSTSLKDVIT 443 Query: 421 VK 422 VK Sbjct: 444 VK 445 >UniRef50_A8ZLK7 DNA polymerase V, putative n=4 Tax=Cyanobacteria RepID=A8ZLK7_ACAM1 Length = 421 Score = 316 bits (809), Expect = 1e-84, Method: Composition-based stats. Identities = 176/421 (41%), Positives = 257/421 (61%), Gaps = 6/421 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + LCD N+FYASCE+ P L KPVV+ SNNDG V+ NA+ KALG+ MG P FK + Sbjct: 5 LIGLCDCNSFYASCESALNPSLQHKPVVIASNNDGVVVTANAKGKALGLVMGVPLFKVQA 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ V FSSNY LY D+S+RVM+ LE +P EIYSIDE F + + T + Sbjct: 65 LIKKHDVRVFSSNYALYGDLSSRVMTILETFTPEQEIYSIDECFMRMP---EFAEATTYS 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++R TVLQ T + V +GI+ +KTLAK+ANH AKK ++ GGV D+S +++ P Sbjct: 122 HKVRKTVLQWTGIPVSIGISTSKTLAKIANHVAKKQKQY-GGVFDISAARNAEGILATFP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V D+WGIGR+ +K L + GI++ +L D + IRK VV R + ELRG CL LE Sbjct: 181 VADIWGIGRQYNKWLLSQGIESAKELRDANEGLIRKKMGVVGVRMIHELRGISCLPLELV 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A K+E SRSFG+ +T+ +++AI +YA+RAAEKLR + Q + F +TSPF Sbjct: 241 AKPKKETCVSRSFGQPVTELADLQEAIAAYASRAAEKLRHQEQVAEAMVVFARTSPFKS- 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 Y+ SA+V+ T + I+ +A ++ I++ G +QKAGV++ + Q +L Sbjct: 300 -GYFRQSATVQFPIATNYTPTIVESARNAMARIYEPGREFQKAGVLMVGLCPETTIQGHL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 ++ + ++LM++MD +N + GRGTL A G++Q W+M+ SPRYTT ++L Sbjct: 359 WEKDEGWEKRKRLMSIMDEVNDRFGRGTLEIAASGLRQTWRMQSKWRSPRYTTCWAELPV 418 Query: 421 V 421 Sbjct: 419 A 419 >UniRef50_Q48B37 RulB protein n=30 Tax=Pseudomonas RepID=Q48B37_PSE14 Length = 427 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 202/422 (47%), Positives = 273/422 (64%), Gaps = 4/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +F L D N+FYASCE VFRPDL P+VVLSNNDGCVIAR+ +AK VKMG P+F+ KD Sbjct: 8 VFGLVDCNSFYASCERVFRPDLAKVPIVVLSNNDGCVIARSYDAKPY-VKMGAPYFQIKD 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + RR G+ FSSN+ LY D+S RVM+ +E + P VE+YSIDEAF DL+G+ +LT+ G Sbjct: 67 VLRRHGIQSFSSNFALYGDLSQRVMAIIESMVPAVEVYSIDEAFADLSGMP--GNLTELG 124 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R IR+ V + T + VGVGIA TKTLAKLANH AK+ Q TGGVVD+ + ++ ++ Sbjct: 125 RSIRSKVYRCTGIPVGVGIAPTKTLAKLANHTAKRLQAHTGGVVDICDPVKRDWVLRNTS 184 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWGIGR++ L+ M I + DLA D +RK F+VV+E+T REL G CL+L+E Sbjct: 185 VGEVWGIGRKMKAHLEGMQILSAKDLAMADPWMLRKTFSVVIEKTARELAGTACLELDEV 244 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P +QEI CSR FG+R+T+ +++A+ +Y RA+EKLR++ C+ I I+T F + Sbjct: 245 EPPRQEICCSRMFGKRLTELGPIKEAVATYMMRASEKLRAQGSVCKKIRVSIRTGMFNPD 304 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E Y N A V+L PT D R + AT ++ I++ G RY KA V+L D G +L Sbjct: 305 EAKYANGALVQLPYPTNDVRLMTQYATEAVSRIFRPGFRYSKAEVLLMDICQPGEFTDDL 364 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F N P S++LM +D++N K GRGTL + W M+R +S YTTR L Sbjct: 365 FAVNQPV-SSDRLMAALDSINGKWGRGTLRTGSVPVTPDWGMRREQMSQSYTTRLDQLWV 423 Query: 421 VK 422 VK Sbjct: 424 VK 425 >UniRef50_B4YK21 TumC n=1 Tax=Tetrathiobacter kashmirensis RepID=B4YK21_9BURK Length = 438 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 185/424 (43%), Positives = 252/424 (59%), Gaps = 7/424 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + L D N FY SCE VFRP L GK ++ LSNNDGCVI+R EAKA+G+KMG PWF+ K L Sbjct: 18 YGLIDGNCFYCSCERVFRPFLKGKALISLSNNDGCVISRTDEAKAMGIKMGQPWFEIKHL 77 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 G++ SSN+ LY DMS+R+MS + SPR EIYSIDE+F D +G+ DL+ + + Sbjct: 78 -EEKGLMALSSNFALYGDMSDRMMSVISRFSPRQEIYSIDESFADFSGIT--EDLSAYSQ 134 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG-GVVDLSNLERQRKLMSALP 180 +IRA VL+ T + VGI TKTLAKLANH AKK +G + + + +M + Sbjct: 135 KIRAAVLRETGIPTCVGIGATKTLAKLANHIAKKQPSWSGVCDLTQLDRYQLADIMKNIE 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWGIGRRI+K+L+ +GI TV DLA R F++V+ +TV+ELRG + LEE Sbjct: 195 VGEVWGIGRRIAKRLNELGIYTVFDLARMKPEAARAEFSIVVGKTVQELRGISRIDLEEV 254 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A K++II SRSFG +TD ++ A+ + A A KLR ++ + FI+TSPF Sbjct: 255 ADPKKQIISSRSFGLPMTDLAGLQSALSEFVAIACNKLRGQNSVAASMQIFIRTSPFDK- 313 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 YGNS V PT D+ A ++LDAIW+ G +Y+KAGVML D Q L Sbjct: 314 GKQYGNSRLVTPPYPTADNLVFTKHALKALDAIWRPGFKYKKAGVMLMDISPADAVQGEL 373 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ--WQMKRAMLSPRYTTRSSDL 418 F QLM +D +NA+ GRG++ G + W M++ S YTT ++ Sbjct: 374 FPVEPEHGKRAQLMVALDGINARYGRGSVKTGSIGFHDREHWYMRQERKSQGYTTNWDEV 433 Query: 419 LRVK 422 L + Sbjct: 434 LIAR 437 >UniRef50_Q818U9 DNA polymerase IV n=137 Tax=Bacillaceae RepID=DPO4_BACCR Length = 415 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 89/417 (21%), Positives = 166/417 (39%), Gaps = 20/417 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D+N F+AS E P L GKP+ V N G +I + EA+ G++ P ++ Sbjct: 14 VILHVDMNCFFASVEIAHDPSLQGKPLAVAGNEKERKGIIITCSYEAREYGIRTTMPLWE 73 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K L + +V N+ LY + S ++ L + +++ SIDE + D+T Sbjct: 74 AKRLCPQ--LVVRRPNFTLYREASFQMFQVLSRFTEKIQPVSIDEGYLDITDCYALGSPL 131 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + + I+ +L L +GIA LAK A+ K + +++ Sbjct: 132 EIAKMIQQALLTELQLPCSIGIAPNLFLAKTASDMKKPLGI------TVLRKRDIPEMIW 185 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V+ + GIG + ++KL+ + I T+ LA D IR + +G ++ Sbjct: 186 PLSVEAMHGIGEKTAEKLNEIHIHTIEQLAKGDEHIIRAKIGKHGIDLQKRAKGTDDREV 245 Query: 238 EEFAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + S +F + + + + + + +++L+ I IK Sbjct: 246 DPSQMGQHKSVGNSMTFSKDMDEEKELLDMLERLSKSVSKRLQKRTLVSYNIQIMIKYHD 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + S +L + RDI AA+R W G + GV + + + Sbjct: 306 RR------TVTRSKQLKNAIWEERDIFQAASRLWKQHWD-GDSVRLLGVTATEIEWKTES 358 Query: 357 QLNL-FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYT 412 L E L+ V+D +N K G L Q +++Q + + L ++ Sbjct: 359 VKQLDLFSFEEDAKKEPLLAVIDQINDKYGTPILQRGSQLLRKQEKSFQQKLENKFM 415 >UniRef50_A8ZS21 DNA-directed DNA polymerase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS21_DESOH Length = 384 Score = 314 bits (805), Expect = 3e-84, Method: Composition-based stats. Identities = 97/398 (24%), Positives = 160/398 (40%), Gaps = 20/398 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 M D++AF+AS E + P+ G+ VVV S+ G V A + EA+ GV P + Sbjct: 1 MILHVDMDAFFASVEQLDHPEWRGRAVVVGRSSGRGVVAAASYEARVFGVHSAMPMSRAL 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + E Y ++S RVM L+ +SP VE SIDEA+ D++G Sbjct: 61 KLCPD--AIVAPPRMERYKEVSARVMEILDAVSPLVEQVSIDEAYLDISGCERLHGTPET 118 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 G+ I+ V +T VG+A K LAK+A+ K + + E + + Sbjct: 119 IGKNIKKQVFDTLGITCSVGVAPIKFLAKIASDMNKPDG------LMVILPEAADRFIET 172 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV V G+G K+L MGI+T+ D+ + K R RG ++ Sbjct: 173 LPVHKVPGVGSVTKKQLALMGIETLGDVVRLPDGVLSKKLGKFGRRLKELSRGIDDSRVV 232 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + + + + +R + A L+ + R + IK + F+ Sbjct: 233 PWH-PAKSVSEETTLSRDTAEKQELRHHLLRQAGDVCRHLQKLNARARVVFIKIKYADFS 291 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-FSQGVAQ 357 + L P Q S I A+ L+ A + GV + + + G Q Sbjct: 292 Q------TTRQTTLDAPVQSSDTIYRQASALLEKQTLAQK-VRLIGVGVTELVVTSGGVQ 344 Query: 358 LNLFD-DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 + LFD + EQ+ + ++ K G+ + Sbjct: 345 MELFDGEARRDSRWEQVDRSVSAISEKFGKTMVKRGSL 382 >UniRef50_B5JVF1 UmuC protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JVF1_9GAMM Length = 420 Score = 314 bits (804), Expect = 4e-84, Method: Composition-based stats. Identities = 171/422 (40%), Positives = 252/422 (59%), Gaps = 5/422 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M AL D N FYASCE VFRP L G+P+ VLSNNDGC+IAR+ E KALGV MG P F+ Sbjct: 1 MLALVDCNNFYASCERVFRPKLEGRPIAVLSNNDGCIIARSQETKALGVPMGAPLFQWLP 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + G FS+N+ LY D+SNRVM+ L++ PR+E+YSIDEAF DL+ + +L+DF Sbjct: 61 VLEENGAHIFSANFALYGDLSNRVMAVLKDECPRLEVYSIDEAFLDLS-MVPLCELSDFC 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R +R V + T + V +G+A +KTLAKLANH AKK G ++ MS+LP Sbjct: 120 RALREKVRRWTGVPVSIGVAPSKTLAKLANHVAKKHPSSDG---IWLMRGTEKNRMSSLP 176 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWG+GRR+ + + GI TV L + + + RK +V +ERTVRELRGE C ++ Sbjct: 177 VSEVWGVGRRLGARFEGFGINTVWQLRNAETAWARKVASVNMERTVRELRGERCFDIDST 236 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +Q+I+ SRSFG+ +T + A+ ++A RA EKLR + + I F T+PF + Sbjct: 237 EEPRQQILVSRSFGQMVTSKDELASALSNFAWRAGEKLRRQGARTQSIRLFAHTNPFRKD 296 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y ++ T + A + LD +++ G+ Y+KAGV+L + +G+ Q +L Sbjct: 297 MPRYCGRVRIQFHQATDSPPVLAKAVAQGLDQVYRHGYHYKKAGVVLDELLPRGIVQWSL 356 Query: 361 FD-DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 ++ + VMD +N K G G + A QG+ + W+M+++ SP +TT ++L Sbjct: 357 LSEESERCEKKSHIGGVMDAINDKMGTGKIRMASQGLGENWKMQQSRQSPSWTTDWANLK 416 Query: 420 RV 421 + Sbjct: 417 TI 418 >UniRef50_C7LWM3 DNA-directed DNA polymerase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LWM3_DESBD Length = 412 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 93/415 (22%), Positives = 165/415 (39%), Gaps = 20/415 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AF+ S E P L GKPVV+ + G A + EA+ G++ P + K Sbjct: 14 VILHLDMDAFFTSVEQADDPLLQGKPVVIGQSLRGVASAASYEARKYGIRSAMPIVQAKK 73 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-F 119 L V Y ++S ++M+ + L P VE S+DEA+ D++G R + Sbjct: 74 LCPH--AVFLPGRMSRYREISVKIMNIMRALCPLVEQASVDEAYADISGTRRIFGPPENI 131 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R ++A +L T+LT VGIA K LAK+A+ K G + + L Sbjct: 132 ARRLKAEILAATNLTCSVGIAPNKFLAKIASDWNKP------GGLTFIPPADVPAFLRDL 185 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G++ ++L +G+ T+ + + + G + Sbjct: 186 PLGRIPGVGKQFQEELRRIGVTTIPHVLAHPRTYWNELMGKRGAFLHDRACGIDDSPVVP 245 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + + D + + + A R +LR + ++ IK F+ Sbjct: 246 GSDP-KSCSAENTLDRDTLDRTLLERWLLIQAERIGRELRGLGKKGLTVTLKIKFQDFS- 303 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S L PT + +I AA L A + G + +F Sbjct: 304 -----SITRSRTLARPTDITTEIFEAARMLLTAEKLP-RPVRLIGTGVSNFRFVQAELPL 357 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 + +A R S+QL MD + K G ++ A I++ + +LS + T Sbjct: 358 M--PDAGRKRSQQLDQAMDRIRDKFGNKSILRAEAAIRESDAVN-DLLSQKNRTS 409 >UniRef50_C8X192 DNA-directed DNA polymerase n=2 Tax=Deltaproteobacteria RepID=C8X192_DESRD Length = 437 Score = 313 bits (803), Expect = 5e-84, Method: Composition-based stats. Identities = 177/423 (41%), Positives = 235/423 (55%), Gaps = 5/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D N FY SCE VF P L G+PVVVLSNNDGC+IAR+ EAK LG+ MG+P+ K++ Sbjct: 17 VYALVDCNNFYVSCERVFAPRLQGRPVVVLSNNDGCIIARSEEAKTLGIAMGEPFHKREP 76 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 RR GV FSSNY LY DMS RVM L +P EIYSIDE F DL Sbjct: 77 FLRREGVNVFSSNYPLYGDMSARVMEALSRFTPHQEIYSIDECFLGFVPAP-DADLLCTA 135 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R IR TV Q T + V VG+A TKTLAK+AN AKK + V L + + ++ Sbjct: 136 RHIRETVRQWTGIPVSVGLAPTKTLAKIANRCAKKDP-ASKNVCLLGDTTTIEQTLARTD 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+D+WGIGRR ++ L G+ T LDL ++R H VV +TV EL +PC LE Sbjct: 195 VEDIWGIGRRYARFLHTRGVDTGLDLVRMPRDWVRNHLTVVGLQTVLELDRQPCFVLETT 254 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I+CSRSFG RI D ++ +A+ + RAAE+LR++ + ++T+ F Sbjct: 255 PAPAKSIVCSRSFGRRIRDKQALGEALARHIQRAAERLRAKGLLAHTVRVALETNRFQP- 313 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y LL PT + + AA LD ++++G YQK GV L + Q +L Sbjct: 314 GPQYAARRCQTLLHPTDATPALHKAAQGLLDVLYRSGFAYQKIGVTLLELVPHNHRQASL 373 Query: 361 FDD-NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ-QWQMKRAMLSPRYTTRSSDL 418 F A LM +D LN GR T+ +A G+ QW M++ +SPRYTT +L Sbjct: 374 FPPAAAETGRQRDLMRTVDHLNTVYGRDTVTWAASGLGPQQWHMRQNHVSPRYTTAWDEL 433 Query: 419 LRV 421 V Sbjct: 434 PCV 436 >UniRef50_Q15TC7 DNA-directed DNA polymerase n=25 Tax=Proteobacteria RepID=Q15TC7_PSEA6 Length = 421 Score = 312 bits (800), Expect = 1e-83, Method: Composition-based stats. Identities = 175/425 (41%), Positives = 244/425 (57%), Gaps = 8/425 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGV-KMGDPWFKQK 59 MFALCD N+ YASCE VF P + KPVVVL+NNDGC+ A AK +GV K P+F+ K Sbjct: 1 MFALCDANSMYASCEKVFDPSIRNKPVVVLTNNDGCICAACGIAKRMGVGKKFVPYFQVK 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL--TGVRNCRDLT 117 GVV SSNYELYAD+S R+M T +P + +YSIDE F Sbjct: 61 KELEAAGVVIRSSNYELYADLSQRMMDTCARFAPDINVYSIDECFLYYGKDATAPQDGWN 120 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + IR TV + L + VGI T TLAK+ANHAAK GV L N + ++ ++ Sbjct: 121 NLANSIRKTVWREVRLPICVGIGPTPTLAKVANHAAK-NVSGFIGVAVLDNEDARKHVLK 179 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V DVWGIG+R+ KL+A+GI T +LA+ D IRK F++++E TVREL GE Sbjct: 180 QLAVTDVWGIGKRLGVKLNALGIHTAWELANRDPSHIRKAFSIIVENTVRELNGEIRHCW 239 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E K+EI +RSFG R+TDY +R A+ +A + KLR + ++ F SP Sbjct: 240 ETVRGAKKEIYSTRSFGSRVTDYDELRAALAGHAETVSVKLRKQKSVTSSMTLFATNSPH 299 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 N Y S + PT D+R+I++ ++ ++Q G Y K GV L D Q + Q Sbjct: 300 D-NGGYVRRSFFHRFTVPTNDTRNILHVIDSAMSQLFQPGVHYYKCGVGLMDLHEQDLYQ 358 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 +LF+ + + +LM MD +N++ GR T+ A +G +Q++ MKRA LSP+YTT+ D Sbjct: 359 YDLFNPS---NDNSRLMACMDNINSRYGRSTVQMAAKGFEQRFSMKRAFLSPQYTTQWRD 415 Query: 418 LLRVK 422 + ++K Sbjct: 416 IPKIK 420 >UniRef50_A6CAV0 DNA-damage-inducible protein P n=2 Tax=Planctomycetales RepID=A6CAV0_9PLAN Length = 388 Score = 311 bits (797), Expect = 3e-83, Method: Composition-based stats. Identities = 89/390 (22%), Positives = 164/390 (42%), Gaps = 20/390 (5%) Query: 7 VNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 ++AFYAS E P+L G+P++V + G V A N A+ GV P + L + Sbjct: 1 MDAFYASIEERDHPELQGQPIIVGGRAEHRGVVSAANYPARKFGVHSAMPMKTARQLCPQ 60 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFGREI 123 F YA++S + + +P VE S+DEAF D++G + + I Sbjct: 61 AH--FFPVRMSDYAEVSQSLQKIFRKYTPLVEPLSLDEAFLDVSGSQLLFGNGREIAASI 118 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 + V L VG+A K LAK+A+ A K + + ++ ++ + LPV Sbjct: 119 KQEVRHSLQLIASVGVAPNKFLAKIASDADKPDG------LVVVEPDKIQEFLDPLPVSR 172 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 VWGIG+ +++ + +GI+T+ + + + + + F +G + Sbjct: 173 VWGIGKMATQRFNRLGIQTISQVRVLEPKILTELFGEQGLHLWNLSQGLDERAVIPE-RQ 231 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 + I +F + D +R + + +LR + I I+ F+ Sbjct: 232 AKSISRETTFSSDVNDLEILRIILMDLVEDVSRRLRKNKLRGKTIQLKIRYDDFS----- 286 Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDA-IWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 + S+ + PT +R+I +A LD + + + GV + F S Q +LFD Sbjct: 287 -TFTRSITVSQPTDLTREIEQSALLMLDQKLPERPLSIRLIGVGVTGFQSGSQHQKSLFD 345 Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 + + +L V D + ++ G ++ Sbjct: 346 E-EDQQKFSRLDQVKDQIASRFGSNSIIRG 374 >UniRef50_P58965 DNA polymerase IV n=29 Tax=Clostridia RepID=DPO4_THETN Length = 384 Score = 310 bits (794), Expect = 5e-83, Method: Composition-based stats. Identities = 94/362 (25%), Positives = 162/362 (44%), Gaps = 19/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E P+ GKPV+V + G V + EA+ G+ P + K Sbjct: 5 IIHVDMDAFFASIEQQDNPEYRGKPVIVGGLSGRGVVSTCSYEARKYGIHSAMPMYMAKK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + + Y ++S ++ L +++P VE SIDEA+ D+T V + D Sbjct: 65 LCPQG--IFLPVRRKRYEEVSEQIFRILYDITPFVEPVSIDEAYLDVTHVDK--NPEDIA 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 EI+ V T LTV VGI+ K LAKLA+ K + + + +++ LP Sbjct: 121 LEIKKRVKDATGLTVSVGISYNKFLAKLASDWNKPDG------LMVITEDMVPEILKPLP 174 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V V GIG + ++KL ++GI+TV DL + + F +RG + E Sbjct: 175 VTKVHGIGEKSAEKLRSIGIETVEDLLKLPQENLIELFGKTGVEIYNRIRGIDERPV-ET 233 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I ++ + + + Q + ++ +E+L E YCR ++ IKT+ FA++ Sbjct: 234 MREIKSIGKEKTLEKDTKNKELLIQHLKEFSEIVSEELIKERLYCRTVTVKIKTADFAVH 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S + + S DI A L+ + + G+ + + QL+ Sbjct: 294 ------TKSKTVDKYIRFSEDIYEVAKGILEEWKLEQY-VRLIGLSVSNLSPVKYEQLSF 346 Query: 361 FD 362 D Sbjct: 347 LD 348 >UniRef50_Q5ZUT9 SOS mutagenesis and repair UmuC protein n=12 Tax=Legionellaceae RepID=Q5ZUT9_LEGPH Length = 431 Score = 310 bits (794), Expect = 6e-83, Method: Composition-based stats. Identities = 203/423 (47%), Positives = 265/423 (62%), Gaps = 9/423 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE +F+P L KP++VLSNNDGCVIAR+ E KALGV+MG P+F K Sbjct: 14 MFALVDCNNFYVSCERLFKPALANKPILVLSNNDGCVIARSNEVKALGVQMGVPYFAVKA 73 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ V FSSNY LYADMS RVMS LE+ P +EIYSIDEAF DL + +F Sbjct: 74 LCKQHKVHVFSSNYTLYADMSRRVMSVLEDNWPAIEIYSIDEAFLDLNTLPQSEH-DEFC 132 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R+++ VL+ T + V +GI TKTLAKLANH AKK R + N+E Q ++ + Sbjct: 133 RKLQKIVLRHTGIPVSIGIGATKTLAKLANHIAKKELRTP-----VFNIENQYHWLAKIV 187 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +VWGIGR+ KKL GI T DLA D++ I+K F+VVL+RTV ELRG C L++F Sbjct: 188 VGEVWGIGRQWGKKLVQQGIYTAHDLAGMDLQLIKKLFSVVLQRTVLELRGVSCGSLQDF 247 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K I S+SFG T+Y ++ QAI S+ ARA EKLR + +S FIKT+ F L+ Sbjct: 248 ESRKSI-ISSKSFGSMQTEYSALAQAISSHCARAWEKLRHQKLMACHLSIFIKTNQFRLD 306 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y + KL+ PT D R +I A L I+++G YQK GV LGD + QL+L Sbjct: 307 LPQYQQTIGFKLINPTDDLRHLIRCAKLCLRKIFRSGFHYQKVGVYLGDLIEKNCLQLDL 366 Query: 361 FDDNAPRP--GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 F+ + + +E+LM+V+D +N K GR TL A +G + W M+ SPRYTT S+L Sbjct: 367 FNQVSEKELNQTERLMSVLDEINTKYGRHTLRLAAEGHVKPWAMRAQSRSPRYTTSWSEL 426 Query: 419 LRV 421 V Sbjct: 427 PVV 429 >UniRef50_B2FJL0 Putative UV protection and mutation protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FJL0_STRMK Length = 429 Score = 310 bits (794), Expect = 6e-83, Method: Composition-based stats. Identities = 178/429 (41%), Positives = 239/429 (55%), Gaps = 18/429 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FY S E F P L G+PV V S+ DGCVIAR+A +K LGV MG P + Sbjct: 11 IALQDGNNFYCSVEASFDPRLRGRPVCVASSGDGCVIARDALSKKLGVPMGAPIHQIPPN 70 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 R + S+N+ LY D+S R+ S L +L P +E YSIDE F DL G+ + D Sbjct: 71 VR-WQITFRSANFALYGDISTRIASILRDLFPAIEQYSIDENFIDLAGIPSK-DHERLAA 128 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 E RA +L+ T + VGI TKTLAKL+N AK GVV + + PV Sbjct: 129 EARARILKWTGIPSCVGIGPTKTLAKLSNKRAK---STVEGVVTTMPDD---PALLTYPV 182 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +D WG+GR+++ +L A GI T DLA D+ +R + VV+ RT REL+G C LEE Sbjct: 183 EDDWGVGRKLTARLGADGILTAGDLAAADVDTLRSRYGVVMARTQRELQGISCADLEEHE 242 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++EI+ SR+FG+ IT + QAI ++A RA EKLRS + FI+T+PF N Sbjct: 243 AQRKEIMVSRTFGKDITSQTELMQAIATFAQRACEKLRSRQLQAAGVWVFIQTNPFKQNL 302 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 P Y S S +LL P+ D+R+I+ A A+++ G+ Y+KAGV L D V Q +LF Sbjct: 303 PQYNPSKSFRLLMPSADTREILMVAQGLAKAMFRPGYGYKKAGVSLLDLIHMDVQQGDLF 362 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA--------GQGIQQQWQMKRAMLSPRYTT 413 S+ +M VMD N K GRG++ FA + W +KR MLSP YTT Sbjct: 363 AGIDQ--RSKAIMEVMDRTNQKFGRGSMGFAFTAWRPSGKTLEKPAWSVKRDMLSPAYTT 420 Query: 414 RSSDLLRVK 422 L+RV+ Sbjct: 421 DWKQLIRVR 429 >UniRef50_Q0ACU7 DNA-directed DNA polymerase n=3 Tax=Nitrosomonas eutropha C91 RepID=Q0ACU7_NITEC Length = 431 Score = 310 bits (793), Expect = 8e-83, Method: Composition-based stats. Identities = 175/431 (40%), Positives = 251/431 (58%), Gaps = 14/431 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FY SCE VF+P L KP++VLSNNDGC IAR+ +AKALGVKMG PWF+ K Sbjct: 3 LFALIDGNNFYCSCERVFQPQLQNKPLIVLSNNDGCAIARSEQAKALGVKMGHPWFQVKH 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + G++ S+N+ LY DMSNR+MS EL EIYSIDE F L G+ D+T Sbjct: 63 LEKSAGLISLSANFALYGDMSNRMMSLASELGDSQEIYSIDECFLGLQGIP---DVTQRA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK---------KWQRQTGGVVDLSNLER 171 ++ RA +LQ + +GI +KTLAKLANH AK + + + Sbjct: 120 KDTRAKILQWIGIPTCIGIGASKTLAKLANHIAKDAERKPGSYPPRLAQVCNLVELTERQ 179 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + L + ++WGIGRRI ++L GIKTV D + D +RK F+V LERT REL G Sbjct: 180 RMYLFGITDIGEIWGIGRRIGQQLKDAGIKTVKDFVELDPGTVRKRFSVTLERTWRELHG 239 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + C+ LEE K+EI +R+FG+ + D S+ +A+ + +RAAEKLR + + I F Sbjct: 240 QSCIDLEEIPAPKKEIAYTRTFGQPVRDLVSLTEAVTEFTSRAAEKLRRQQSFASAILVF 299 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 I TS P Y S +V L+ P D+ +++AA R L I++ G+ + KAGV+L D Sbjct: 300 IHTSKHRA-GPQYARSITVPLVRPASDTNSLLSAAIRGLRTIYKPGYDFIKAGVILMDLS 358 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ-WQMKRAMLSPR 410 + V Q+ L ++ ++QLM +D +N++ GRGT+ + G ++ W M + +P Sbjct: 359 TTTVQQIELDFGSSMSNKADQLMQAIDQINSQFGRGTIIYGSTGTGKKTWSMSQQRKTPS 418 Query: 411 YTTRSSDLLRV 421 YT + D+ Sbjct: 419 YTAKIRDIPIA 429 >UniRef50_A3DH61 DNA polymerase IV n=9 Tax=Clostridiales RepID=DPO4_CLOTH Length = 399 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 96/405 (23%), Positives = 161/405 (39%), Gaps = 21/405 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + CD+N FYAS E ++ P+L KPV V + G V+A+N AK VK G+ ++ Sbjct: 4 VILHCDLNNFYASVECLYHPELRDKPVAVCGSIEDRHGIVLAKNYAAKKYKVKTGETVWE 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DL 116 K+ G+V +N+ LY S E + RVE + +DE + D++ D Sbjct: 64 AKNKCP--GLVVVKANHSLYYKFSKYARQIYEYYTDRVESFGLDECWLDVSESTLLFGDG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 T EIR + + +TV VG++ K AKL + K V + ++ + Sbjct: 122 TKIANEIRERIKRELGVTVSVGVSYNKVFAKLGSDMKKPDA------VTVITENDFKEKI 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV+ + +G KKL+ M + T+ DLA+ F+ + G Sbjct: 176 WGLPVEALLYVGDSTKKKLNNMAVFTIGDLANCHSEFLVRQLGKWGYTLWSFANGYDTSP 235 Query: 237 L--EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + I S + +T+ +R I + E+LRS + R + IK Sbjct: 236 VAKNDCEIPIKSIGNSLTAPRDLTNNEDVRILIYVLSESVGERLRSHNLKGRTVQISIK- 294 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-FSQ 353 + L T + +I A W + GV + D S Sbjct: 295 -----DPELQTLERQAGLDIHTSITSEIAQKAYEIFLKSWNWSKNVRALGVRVTDLVESD 349 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 Q++LF D+ R E L +D + + G ++ + Sbjct: 350 TCTQISLFSDDIKRQKLEILDECVDRVRERFGYYSVRRGILLQDR 394 >UniRef50_C9LED2 UmuC protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LED2_9BACT Length = 422 Score = 309 bits (791), Expect = 1e-82, Method: Composition-based stats. Identities = 161/423 (38%), Positives = 238/423 (56%), Gaps = 3/423 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL D N+F+ S E F P L GKPV VLS+NDG ++A EAK +G+K GDP FK +D Sbjct: 1 MWALADCNSFFCSVEKAFHPGLRGKPVCVLSSNDGNIVALTPEAKKIGIKRGDPVFKVRD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L V FS+N +LYA MS RV + L + VE YSIDE+FC L G D+ +F Sbjct: 61 LISCHNVKLFSANMKLYAAMSRRVTNMLRKRIHHVENYSIDESFCCLDGYEQLYDMENFM 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 REI V T + + VGIA +KTLAK+ + AK+++ V + E++RK ++ + Sbjct: 121 REIVENVRLWTAIPMSVGIAPSKTLAKIGSKFAKQYKGYRS-VCLIDTEEKRRKALALVD 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + DVWGIGRR KKL I T L AD ++R F + + T +EL G C+ E Sbjct: 180 LSDVWGIGRRTLKKLAYYNIHTPLAFADKSENWVRSRFTLPMIHTWKELNGVDCIDTTEV 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 KQ I SRSFG +T+ ++ ++ +A+ A KLRS+ CR ++ FI T+ F + Sbjct: 240 IA-KQTICTSRSFGNMVTELEDLKASVAHFASSCANKLRSQSSLCRSVTVFIATNRFRED 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y N + L T D+ +I N A L +++ G +Y+K+GV+LGD S +L Sbjct: 299 LPQYNNMLTYTLPIATADTLEITNTAIAILQELYRPGIQYKKSGVVLGDISSGKAISQDL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG-IQQQWQMKRAMLSPRYTTRSSDLL 419 FD + R QLM +D +N + G+ T+ +G +Q+W K +P Y T ++++ Sbjct: 359 FDHISNRSERHQLMHFIDNINQRYGKKTILLGIEGIGKQKWTAKCEQRTPNYLTDINEIM 418 Query: 420 RVK 422 ++ Sbjct: 419 TIR 421 >UniRef50_C0WCT4 DNA-directed DNA polymerase n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCT4_9FIRM Length = 397 Score = 308 bits (788), Expect = 3e-82, Method: Composition-based stats. Identities = 93/395 (23%), Positives = 161/395 (40%), Gaps = 21/395 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + P+ +PV+V + G V + EA+ GV P + + Sbjct: 12 IMHVDMDAFFASVEQLDHPEYRNRPVIVGGLSGRGVVSTASYEARRFGVHSAMPMKEALE 71 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDF 119 + + Y Y ++S ++ E SP VE SIDEAF DLTG+ D+ Sbjct: 72 RCPKG--IFVEGRYGRYLELSQKIRQIFHEFSPLVEPLSIDEAFLDLTGMERLVGDIPAL 129 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G I+ + + T LT VG+A K LAKLA+ K + + ++ L Sbjct: 130 GLRIKERIKKETGLTASVGLAPNKFLAKLASDLKKPNG------LVIIRQSEAASRIAPL 183 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ ++GIG R + L GI+T+ DLA D F+ F E +R G + Sbjct: 184 PISRIFGIGARSASLLTRFGIRTIGDLAACDASFLSPLFGKNTETILRFAHGLDNRPVIP 243 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q + +F + + D+ + + + + + +LRS ++ +KT F + Sbjct: 244 -DEKRQSLGRELTFEKDLRDHAVILEILWNLSQEVGFRLRSAGLSGYTVTLKMKTQDFKV 302 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + S+ P Q +I+ + GV + Q ++ N Sbjct: 303 H------TRSLSSDLPLQLDEEIMERVKILTRRNPLRD-PVRLLGVTVSHLVPQESSEQN 355 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 LF + + Q +D L + G + Sbjct: 356 LFSKSD---RNTQRSLAVDALKKRFGETIIKKGAP 387 >UniRef50_C0QJE1 DinP n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJE1_DESAH Length = 384 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 92/398 (23%), Positives = 159/398 (39%), Gaps = 20/398 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQK 59 M D++AF+A+ E P+ G+P+VV N V + EA+ G+ P F Sbjct: 1 MILHMDMDAFFAAIEQRDHPETAGRPLVVGGNSKRSVVATASYEARRFGIHSAMPMFMAL 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 D ++ + YA +S ++M+ L E +P VE SIDEAF D+TG + Sbjct: 61 DKC--SHLIVIPPDKSKYAAVSGQIMTLLNEFTPLVEQVSIDEAFLDITGCERLFGSVEK 118 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+ + Q T LT +G + K LAK+A+ K + +++ Sbjct: 119 ICVAIKDRIKQETGLTCSIGASHLKFLAKIASDMNKPDGIH------IIKRTDTPEVIQT 172 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + V G+G R ++ +GI T+ D++ + K F + RG + Sbjct: 173 LAIKKVPGVGERAMDQMKQLGIITLGDISRIPHPILEKKFGKFATDLLNFSRGIDPSIIG 232 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I + D M++ + ++A R +LR+++ I+ +K S F Sbjct: 233 TSG-PIKSISSESTLENDTLDMVVMKKHLLAHAQRVGRQLRAKNLLATNITIKLKFSDFT 291 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-SQGVAQ 357 + KL+ P S I A + + + GV + F Q Sbjct: 292 Q------ITRQTKLMVPICASTAIYREACTLFEQTAKTRK-IRLLGVGVSSFSTPDAPVQ 344 Query: 358 LNLFDD-NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 L LFD+ + L +D ++ + G T+ A Sbjct: 345 LELFDNIDQKDRRWAVLDRAVDRISHRFGAKTITSASL 382 >UniRef50_B4WV07 ImpB/MucB/SamB family n=6 Tax=Synechococcus sp. PCC 7335 RepID=B4WV07_9SYNE Length = 425 Score = 307 bits (786), Expect = 5e-82, Method: Composition-based stats. Identities = 201/427 (47%), Positives = 271/427 (63%), Gaps = 10/427 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FALCD N FY SCE VFRP+L VLSNNDGC IAR+ + K LGV MG PW K + Sbjct: 3 IFALCDCNQFYVSCERVFRPELETHACGVLSNNDGCFIARSPQLKTLGVPMGGPWHKYRS 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + V FSSNY LY DMS RVM+ L +P +E+YSIDE F L G + DLTD+G Sbjct: 63 LCTQNNVAVFSSNYALYGDMSQRVMACLGTFTPDMEVYSIDEVFLQLDGFAHL-DLTDYG 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R+++ V Q T + +GVGI TKTLAK+AN+ AKK T GV +L + Q +++ + Sbjct: 122 RQMQRKVHQWTGIPIGVGIGPTKTLAKVANYVAKKR--TTSGVFNLCDRTLQDQVLPTIA 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+D+WGIGRR + KL+A+GIKT DL + R IR+ FNVV ER V ELRG CL LEE Sbjct: 180 VEDIWGIGRRWALKLNAIGIKTAADLRAAEPRTIRQVFNVVAERIVHELRGTACLGLEEI 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I+CSRSFG+ I++ + +AI +AARAA KLR + C + F++T+ F + Sbjct: 240 Q-PKKNIMCSRSFGQMISEKHLLLEAIADHAARAAGKLRGQGSRCGGLQVFLQTNRFRKH 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E Y NS + P++DSR+II+AA + +++ G Y K GVML D Q NL Sbjct: 299 EAQYSNSCTWSFTVPSRDSREIIHAARACMAQLYRPGFEYHKCGVMLVDLAPATTVQGNL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ-----QQWQMKRAMLSPRYTTRS 415 F S++LM +MD+LNAK GRGT+ FA QG++ + W M++ SPRYTTR Sbjct: 359 FCSTD-HEQSDELMALMDSLNAKMGRGTVRFAAQGLEKGKQRKSWGMRQQWRSPRYTTRL 417 Query: 416 SDLLRVK 422 ++++V+ Sbjct: 418 KEIVKVR 424 >UniRef50_D0Z2K2 Error-prone repair protein UmuC n=5 Tax=Photobacterium RepID=D0Z2K2_LISDA Length = 430 Score = 307 bits (785), Expect = 6e-82, Method: Composition-based stats. Identities = 167/425 (39%), Positives = 239/425 (56%), Gaps = 6/425 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D FY SCE +F P L GKP+VVLSNNDGC +A + +AKALG+ G PWFK + Sbjct: 8 VWALVDAKNFYCSCEQLFDPSLVGKPLVVLSNNDGCCVAISQQAKALGIVRGVPWFKIQR 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + GV SSNY LYADMS R + L SP VE YSIDEAF L G +L D+G Sbjct: 68 EAIQQGVQVRSSNYTLYADMSRRFIEELSRFSPHVEQYSIDEAFIRLDGF-QLNELADYG 126 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 REIR T+L+ L V VGI T TLAKL NHAAK +++Q GV+ + R++ L+ P Sbjct: 127 REIRTTILKNIGLPVRVGIGATPTLAKLGNHAAKVYEKQVRGVIQIDTEHRRQWLLERTP 186 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + D+WGIG + + +L GI+ LA D IR+ +NV L RTV EL+ C+ + Sbjct: 187 IQDIWGIGAKTATRLRTAGIQNGWQLAQQDSIDIRRLWNVTLARTVLELQQISCISPGDV 246 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +++I+ SR+FG+ I + A+ + RA EKLR + + F++T+ Sbjct: 247 EEKRKQILSSRTFGQGINQLDELNAALAFHCQRAGEKLRKQQSQTGVVGVFLRTNKHKSL 306 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS--QGVAQL 358 P + SA + L++ TQD+ I+ A L+ I++ G+ Y K GV+L QL Sbjct: 307 -PQHHRSAVMPLISATQDTYRILEVAQALLNEIYRGGYEYYKVGVILEQLTDVTDDAIQL 365 Query: 359 NLFDDNAPRP-GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 ++FD +A +LM V D +NA+ + + A W M++A S R+TTR + Sbjct: 366 DMFDSSALYESKRRELMAVADRVNARY-KNGIKPASIISSTNWHMRQAHRSNRWTTRLDE 424 Query: 418 LLRVK 422 L + Sbjct: 425 LPIAR 429 >UniRef50_A5CQW8 DNA polymerase IV n=18 Tax=Actinobacteria (class) RepID=A5CQW8_CLAM3 Length = 430 Score = 307 bits (785), Expect = 7e-82, Method: Composition-based stats. Identities = 109/410 (26%), Positives = 177/410 (43%), Gaps = 23/410 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+A+ E + RP+L G PV+V ++ G V + EA+ GV+ P + Sbjct: 23 ILHIDMDAFFAAVELLERPELRGTPVIVGGSSGRGVVTSATYEARRFGVRSAMPMAQALR 82 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L + V+ + E YA S VM +++P VE SIDEAF D+ G R + Sbjct: 83 LCPQATVI--GGHMEKYAHWSRVVMGIFRDVTPLVEPLSIDEAFLDVAGARGLFGSPAEI 140 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G IR V T LT VG A TK +AKLA+ K + + + AL Sbjct: 141 GAMIRRRVHAETGLTCSVGAASTKFVAKLASTRCKPDG------LLVIPAAETLPFLHAL 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 PV +WG+G+ + L G++TV D+ADT + ++ R G ++ Sbjct: 195 PVGALWGVGKTTEEALLRRGLRTVADIADTPLPALQSMLGESAGARLHDLSWGRDPRRVS 254 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F + +TD +R+ + A R AE+LR R +S ++ S F Sbjct: 255 T-HREEKSMGHENTFHDDVTDPEIVRRELLGQATRVAERLRRAGLTARTVSLKLRYSDFR 313 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S L PT +R I + + + + G R + GV + Sbjct: 314 ------TITRSRTLSEPTDVARRIYDEIRDVYEQVARPGDRIRLVGVRAEQLDDADNRAV 367 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 L+D + +E+ +D + GRG + A + KRA +S Sbjct: 368 ALWDADEGWREAER---TVDQAAQRFGRGAIGPASLLRKP--GAKRATVS 412 >UniRef50_C7I5S1 DNA-directed DNA polymerase n=2 Tax=Proteobacteria RepID=C7I5S1_THIIN Length = 431 Score = 306 bits (784), Expect = 9e-82, Method: Composition-based stats. Identities = 183/432 (42%), Positives = 244/432 (56%), Gaps = 14/432 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FYASCE VF+P+L GKP+VVLSNNDGC IAR+ EAKALGVKMG P F+ Sbjct: 1 MFALIDGNNFYASCECVFQPELRGKPLVVLSNNDGCAIARSDEAKALGVKMGQPIFEVPP 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 RR + S+N+ LY DMS RV++ L E +PRVE YSIDE+F DLTG+ F Sbjct: 61 AVRR-QLAIRSANFTLYGDMSARVLAILREAAPRVESYSIDESFLDLTGILKPGSREAFC 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK---------KWQRQTGGVVDLSNLER 171 RE+R V + T + VGI TKTLAKL NH AK + + + + Sbjct: 120 RELRERVHRWTGIPNCVGIGATKTLAKLGNHVAKSAVRKPGSYPAELGRVADLSALSPQG 179 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 +++A PV ++WG+GRR + KL +M I+T L L D I F VVL RT REL Sbjct: 180 LSAVLAATPVGELWGVGRRWAAKLRSMNIETALQLRDAPRALILDSFGVVLSRTQRELAS 239 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 EPCL LEE P +Q+I+ SRSFGER+ D+ S+ +A ++A RA EKLR+ + F Sbjct: 240 EPCLALEEVEPDRQQIMVSRSFGERVEDHQSIGEAFATFAMRACEKLRARGLVASAVGIF 299 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 T F + + L T DSR ++N + + G+ Y+KAGV L D Sbjct: 300 ANTDHFRPELHQHHPQRTTDLPRATSDSRVVLNTIRQMQRGFLKDGYAYKKAGVWLMDLS 359 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ--WQMKRAMLSP 409 Q +LF ++LM +D +N + GRGT+ G +++ W M++A LS Sbjct: 360 RPDQLQPDLFSTITIGD--DKLMQTLDAINRRYGRGTVGLGATGWRERPQWGMRQATLSS 417 Query: 410 RYTTRSSDLLRV 421 R+TT DL R Sbjct: 418 RFTTSLRDLPRA 429 >UniRef50_C6XEM8 DNA-directed DNA polymerase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEM8_METSD Length = 425 Score = 305 bits (782), Expect = 1e-81, Method: Composition-based stats. Identities = 184/423 (43%), Positives = 247/423 (58%), Gaps = 4/423 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL DVNA Y SC VF P L GK +VL+NNDGC ++RN AK LG+KMG+PWF+ K Sbjct: 5 IALVDVNAMYWSCHRVFNPSLEGKAGIVLTNNDGCAVSRNDLAKQLGIKMGEPWFQIKAN 64 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + VV FSS Y LYA MS R + L E SP EIYSIDE F DLTG+R G Sbjct: 65 PKYKDVVAFSSTYALYASMSKRFTNLLAEFSPHQEIYSIDECFLDLTGMR--GRQIQRGL 122 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV-VDLSNLERQRKLMSALP 180 IR + L V VGI TKTLAKLANH AKK+ G V ++ + + + L Sbjct: 123 NIRHRIKNEVGLPVCVGIGSTKTLAKLANHIAKKFPHFEGVVDLNEWEPHQMVAMFTMLD 182 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V VWG+GRR +++L A+ +K+V+DL D FIR+ F+VVLERTVREL GE CL LE Sbjct: 183 VGQVWGVGRRYAERLAALDMKSVMDLKLADPEFIRQQFSVVLERTVRELNGEACLDLEAV 242 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K++II SRSFG +I D P++ A+ S+ +RAAEKLR ++ Y IS ++T+ F + Sbjct: 243 REDKKQIISSRSFGRQIEDLPALVNAVSSFVSRAAEKLRLQNSYAGVISVEVETNRFNPD 302 Query: 301 EPYYGNSA-SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 ++L PT D+ + + A L I++ G RYQ+AG+ML + G Q++ Sbjct: 303 PYSKYGKRACIRLPAPTDDTLKLNHVAQWILKKIYKPGFRYQRAGIMLDEIVPAGGGQVD 362 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 LF + L V+D +N++ G+ + G W MK+ +LSP YTTR DL Sbjct: 363 LFGYQPAIGKRDNLSAVVDEINSRMGKNAVRVGTMGFSMDWDMKQDLLSPFYTTRIEDLP 422 Query: 420 RVK 422 + Sbjct: 423 VAR 425 >UniRef50_Q1QXT4 DNA-directed DNA polymerase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXT4_CHRSD Length = 426 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 180/424 (42%), Positives = 243/424 (57%), Gaps = 4/424 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M L D N FY SCE VF+P L G PV V+SNNDGCVIAR+ E KALGV+MG P F+ ++ Sbjct: 1 MIGLVDCNNFYVSCERVFQPRLEGVPVGVMSNNDGCVIARSNELKALGVEMGTPAFELQE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + + SSNYELY DMS RV LEE S VE YSIDE F G Sbjct: 61 WVNQGRIHLLSSNYELYGDMSARVREVLEEFSAGVEPYSIDEMFVRFDGFDA-ATTQALA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R + V Q T + V VG+A T+TLAKLAN AAKK G V +N + R+L+ Sbjct: 120 RTLYRNVRQFTGIPVCVGVAPTRTLAKLANRAAKKLPEYGGTCVMHANGDDTRRLLEHTA 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + D+WG+G+R+ ++L GIKT DL D + IR+ F+V LERTVREL+G PC++L + Sbjct: 180 LGDIWGVGQRLVERLALQGIKTAWDLRQADPKAIRQRFSVTLERTVRELQGTPCIELHDA 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I+ SRSFG D ++ AI +A R AEKLR + + R + F+KT+ + Sbjct: 240 DRPRDRIMTSRSFGRLTGDLGDLQDAIRQHAQRGAEKLRRQDSHARAVLVFLKTNRHRPD 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y S ++L PT DSR I+ AA + L+ I++ G+R+ K GVML D QL+L Sbjct: 300 LPQYSPSIVIELPEPTDDSRPILAAARQGLETIYRRGYRFMKGGVMLLDLVDANREQLSL 359 Query: 361 FDDNA---PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 D R +LM +D LN K G+GT+ W ++ A +PR+TT+ + Sbjct: 360 LDTPEREAQRERDHKLMAALDALNGKMGKGTVRLGVPRQNAAWHLRCAHRTPRWTTQWRE 419 Query: 418 LLRV 421 L R+ Sbjct: 420 LPRI 423 >UniRef50_B0PEH3 Putative uncharacterized protein n=2 Tax=Clostridiales RepID=B0PEH3_9FIRM Length = 415 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 86/403 (21%), Positives = 158/403 (39%), Gaps = 20/403 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFKQ 58 D +AFYAS E ++ P L G+PV V+ + G V+A++ EAK GV+ GD ++ Sbjct: 8 ILHVDCDAFYASVECLYNPALRGRPVAVVGDPELRHGIVLAKSQEAKLFGVQTGDALWQA 67 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLT 117 + + + +++E Y S E S R E + +DE++ DLTG D Sbjct: 68 RQKCKE--ITFVPAHFEKYLSFSRMTKEIFSEYSDRCESFGLDESWIDLTGCTELFGDGP 125 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +IR + + +T VG++ K AKL + K + + ++ + Sbjct: 126 AVATQIRRRIKEELGITASVGVSFNKVFAKLGSDLNKPDGM------TVIAYDGFKEQVW 179 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV + +GR + KL + GI T+ LA I F+ F + G + Sbjct: 180 PLPVKTLLYVGRATTGKLKSYGITTIGALAQAPITFLEHRFGKIGRMLWMFANGLDTSPV 239 Query: 238 EEFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + I S + + ++ + + + +LR C+ ++ I+ S Sbjct: 240 SNIGAKSLIKSIGNSTTAPRDLITDQEIKITLYALCESISARLREHSFRCKTVALTIRDS 299 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + L P+ ++++ +AA + G + GV + Sbjct: 300 SLT------SFERQLALKRPSCITQELFDAAFSLYKQHHKCGLPVRSLGVRAANLMLIDC 353 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 QL++F D A E+L +D + + G + Sbjct: 354 MQLSIFPDVARAQKQERLEETVDDIRRRFGHFAVQRGVMLTDP 396 >UniRef50_C9KLE5 DNA polymerase IV n=2 Tax=Veillonellaceae RepID=C9KLE5_9FIRM Length = 395 Score = 305 bits (780), Expect = 2e-81, Method: Composition-based stats. Identities = 86/405 (21%), Positives = 165/405 (40%), Gaps = 24/405 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AF+AS E + KP++V + G V + EA+ GV P + + Sbjct: 6 LVMHVDMDAFFASIEQRDHEEYREKPLIVGGLSGRGVVSTCSYEARRFGVHSAMPIVRAR 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L + + +Y Y +S ++ + +P VE SIDEAF DLTG+ Sbjct: 66 RLCPQG--IFVEGDYANYKAVSQQIFAIFARYAPVVEPLSIDEAFLDLTGMELLMESPRA 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + +++A + ++T L VGIA K LAKLA+ K + + + ++ ++ Sbjct: 124 YAEKLKAEIREKTGLVASVGIAPNKFLAKLASDLEKPDG------LVIITEQTKQAVLDP 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE-RTVRELRGEPCLQL 237 LPV +WG+G++ + +L+A+ I+T+ L T + + F + + G + Sbjct: 178 LPVGRIWGVGQKTAARLEALRIRTIGQLRRTPRERLVRAFGAHMADHLLALASGIDTRPV 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + I +F I ++ + + + + + +LR R + ++ F Sbjct: 238 AP-REPAKSIGKEVTFPTDIESAEAVERVLLALSEKVGYRLRRHGCKGRTVQLKLRLGDF 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S L T R+I A A+ + G+ + F + G Sbjct: 297 R------TYTRSRTLAEATCYDREIYETALAFYRALGVK-QGIRLLGISVSGFDTSGAI- 348 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 +LF + A E L +D + + G + A ++ Sbjct: 349 -SLFHEEA---RKENLYAAIDAIKKRFGEQGITKAQLLKKRDEDK 389 >UniRef50_UPI0000E87FBE DNA repair protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87FBE Length = 419 Score = 305 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 163/423 (38%), Positives = 236/423 (55%), Gaps = 8/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M AL DVN FY SCE +F P L KPVVVLSNNDGC+I+R+ EAK LG+KMG+P FK Sbjct: 1 MIALVDVNNFYVSCERLFNPYLINKPVVVLSNNDGCIISRSQEAKNLGIKMGEPLFKASA 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + R+ V SSNY LYAD+S RVMS L + + EIYSIDE F D+ G N +D Sbjct: 61 IIRQHQVQVLSSNYPLYADISARVMSLLSDFTSTQEIYSIDECFLDMEGHENLQD---IA 117 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN--LERQRKLMSA 178 R+I+ + + + V VGI TK LAKLAN AKK + GV +SN +M Sbjct: 118 RKIKRLLWRYLRMPVCVGIGPTKVLAKLANRCAKKQDQ-QSGVFIISNASASELNNMMDD 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L VD +WG+G+ ++ KL I ++LDL ++ ++RK F + +ER + EL G CL ++ Sbjct: 177 LSVDQIWGVGKALAVKLQKKSIYSILDLKQSNPTWVRKFFGINMERIIYELNGVSCLLID 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 K+ I CSRSFGE + DY + +A+ +++ RAA K RS++ ++ F+ T+PF Sbjct: 237 NQYVAKKGIRCSRSFGENVNDYIRLAEAVTTFSGRAALKARSQNTGTNAVTVFLSTNPFN 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 +Y ++ ++ L T + I+ AA L I++ Y K GV+L Sbjct: 297 KEHRHYQDAITMPLEQLTNQTNLIVKAALSGLRKIYKQKVTYSKCGVILNSLEELDKLSY 356 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 L L ++D +N K + +L+ A Q + W M+++ S Y+T S+L Sbjct: 357 PLISPI--HNRQANLTKIIDEINNKFDKNSLHIAFQPLYPSWDMRQSYRSQSYSTSWSEL 414 Query: 419 LRV 421 L V Sbjct: 415 LLV 417 >UniRef50_D0J481 DNA-directed DNA polymerase n=4 Tax=cellular organisms RepID=D0J481_COMTE Length = 432 Score = 305 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 184/435 (42%), Positives = 255/435 (58%), Gaps = 17/435 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE FRP L G PVVVLSNNDGC I+R+ EAKALGVKMG P+F+ +D Sbjct: 1 MFALIDGNNFYVSCERAFRPALQGIPVVVLSNNDGCAISRSDEAKALGVKMGQPFFQLRD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L G+VC S+N+ELY DMS+R+MS L P EIYSIDE+F + RDLT Sbjct: 61 LVEHKGLVCLSANFELYGDMSDRMMSLAAGLGPTQEIYSIDESFI--GDLDGVRDLTRRA 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK---------KWQRQTGGVVDLSNLER 171 IRA +L+ T + VG+A TKTLAKL NH AK + Q + ++ Sbjct: 119 FAIRARILKWTGIPTCVGLAPTKTLAKLCNHVAKDSERKPGSYPAELQRVCNWAELSEQQ 178 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + ++ ++WG+GRRIS +L G+ T LDLA R ++VVLERTVREL+G Sbjct: 179 RTDILGRTAAGEIWGVGRRISVQLAEQGVLTALDLARLPAHAARDGWSVVLERTVRELQG 238 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 C+ LE K++I C+RSFG IT P + +A+ +A RAAEKLR+ + F Sbjct: 239 VSCMSLETAPAAKKQIACTRSFGHPITTLPPLIEAVSEFATRAAEKLRAGGLRAGALHVF 298 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + TSPF +Y +A ++L P+ D++ ++NAA L +I+Q G++ KAGVML D Sbjct: 299 VHTSPFRPGRRFY-ETAVIQLQPPSSDTKALVNAAVHGLRSIYQPGYQLSKAGVMLQDLC 357 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG----IQQQWQMKRAML 407 V Q +L P +LM MD +N + G+GT++ A G + W+M++ Sbjct: 358 PTEVQQGDLLFQ-EPCRDQSKLMEAMDKINKRFGKGTVHVASTGVPEQDESGWRMRQERR 416 Query: 408 SPRYTTRSSDLLRVK 422 +PRYTT+ ++ + Sbjct: 417 TPRYTTKIDEIPIAR 431 >UniRef50_D0RPK3 Protein UmuC n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPK3_9RICK Length = 433 Score = 305 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 168/420 (40%), Positives = 248/420 (59%), Gaps = 3/420 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N+FY SCE +F P + PVVVLSNNDGCVI+R+ EAK +G+KMG+P+FK K L Sbjct: 14 IALVDCNSFYVSCERLFNPRINNLPVVVLSNNDGCVISRSVEAKKIGIKMGEPYFKVKHL 73 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + V FSSNY LY D+S RVM L++ P +EIYSIDEAF DL+ + DL +F Sbjct: 74 IKSHKVQVFSSNYALYGDISRRVMHVLKKFCPTIEIYSIDEAFLDLS-LIKDEDLENFIS 132 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 E+R +L+ T + V +G+A+TKTL+K+ANH AKK + L++ + L+ P+ Sbjct: 133 ELRFIILKWTGIPVSIGVAKTKTLSKVANHIAKKEKI-GIKSFILNDEKEIDDLLKNFPI 191 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +D+WG+GR+ISK + IK+ DL D R+I+K+ NV+ +TV ELRG C+ E + Sbjct: 192 EDIWGVGRKISKLYKSNNIKSAYDLKDASNRWIKKNTNVLGLKTVMELRGINCIGFESNS 251 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++ SRSFG+++ DY ++++++ ++ AAEK+R + Q + + FI+ SPF +E Sbjct: 252 NPRKNCCVSRSFGKKVLDYDTLKESVVAHCLNAAEKIRVDRQVVKSVIVFIRNSPFDKSE 311 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 ++ S V L P+ DS + +SL I+ G RYQKAGV+ +G LF Sbjct: 312 KFFSRSKKVDLPIPSDDSILLTKICIQSLKEIFLKGPRYQKAGVIFSGLSRKGKYDEGLF 371 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 + S+ LM +D N K GR + A G W+M+R S T+ L + Sbjct: 372 S-YEKKEKSQSLMKAIDKTNFKFGRNMITVADTGFCNNWRMRRGHSSKIDTSSYDFLPTI 430 >UniRef50_D1R5W7 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R5W7_9CHLA Length = 421 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 159/421 (37%), Positives = 236/421 (56%), Gaps = 5/421 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F L D N FY SCE + P L KPV+VLS NDGCVI+R+ EAK LG+KMG+P+FK K+ Sbjct: 4 FVLADCNNFYVSCERMLHPKLEEKPVIVLSQNDGCVISRSQEAKQLGIKMGEPFFKVKEY 63 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 R V+ +SSNY+LY D+S RVM++L + +P ++IYSIDEAF + ++ Sbjct: 64 CERAKVIVYSSNYQLYGDISERVMNSLSQFAPEMQIYSIDEAFLKFPITLSDEEMFAECM 123 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 I+ + + + + +GIA TKTLAK+AN AK+ + GV L+ + ++ P+ Sbjct: 124 RIKKLIKKWVGIPISIGIAPTKTLAKVANSLAKQN--RDLGVFSLNEPLSREAILKEYPI 181 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +DVWGIGRR+SK+L +GI TV D F+RK VV ER + EL+G L LEE + Sbjct: 182 EDVWGIGRRLSKRLKGIGILTVWDFIQLTPYFVRKTMGVVGERMLLELQGISALDLEESS 241 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 KQ I SRSFG ++TD + +A+ ++ ++A KLR + QY + +++ Sbjct: 242 -PKQSITFSRSFGRKVTDISELGEALATFVSKACVKLRKQKQYAAALLVYLQFFSQDGES 300 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 + +PT D+ ++I A + L ++ +Y+K GV+L D S +LF Sbjct: 301 LQGNHMI-YSFPSPTDDTIEMIAATKQCLTKLYIDKKKYKKCGVILLDLKSAEQFMPDLF 359 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 P +Q+M MD LN + + T++ G GI Q W+ + SP TT L V Sbjct: 360 -QKGPDIKRQQVMRAMDKLNTRLKKRTVFLGGTGIHQDWKSRSDQRSPYNTTSWDHLPIV 418 Query: 422 K 422 K Sbjct: 419 K 419 >UniRef50_B9JZV6 DNA-damage-inducible protein n=17 Tax=Bacteria RepID=B9JZV6_AGRVS Length = 385 Score = 304 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 89/358 (24%), Positives = 150/358 (41%), Gaps = 17/358 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E +P+L GKPV V + G V A + EA+A GV P K Sbjct: 35 IIHVDMDAFYASVEQRDKPELLGKPVAVGGSAARGVVAAASYEARAFGVHSAMPSVTAKR 94 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 ++ +++Y +S+++ E +P +E S+DEA+ D+T + T+ Sbjct: 95 KCPD--LIFVPPRFDVYRQVSHQIREIFAEYTPLIEPLSLDEAYLDVTENLKGMEIATEI 152 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIRA + T L GI+ K LAK+A+ K + + + + AL Sbjct: 153 ALEIRAKIKAATGLNASAGISYNKFLAKMASDLNKPNGQA------VITPKNGPGFVEAL 206 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV G+G ++++ GI+T LDL ++F++ HF RG Q+ Sbjct: 207 PVKRFHGVGPATAERMQRHGIETGLDLKSKSLQFLQTHFGKSGSYFYGIARGIDERQV-R 265 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + +F E I D R + A + S + I+ IK S F+ Sbjct: 266 ADRIRKSVGAEDTFVEDIDDLDPARAELRPLAEKVWRYCESHDIKGKTITVKIKYSDFSQ 325 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S + D I+ A L +++ H + G+ L ++ Q Sbjct: 326 A------TRSKTVAGYVSDIDMIMGIAEPLLASVFPFKHPVRLLGITLSSLNTEESEQ 377 >UniRef50_D1PR84 DNA-directed DNA polymerase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR84_9FIRM Length = 415 Score = 304 bits (778), Expect = 4e-81, Method: Composition-based stats. Identities = 94/412 (22%), Positives = 158/412 (38%), Gaps = 25/412 (6%) Query: 1 MFALCDVNAFYASCETVFRP------DLWGKPVVVLS---NNDGCVIARNAEAKALGVKM 51 ++ DVN+ + S + + DL P V G V+A+++ AK GV+ Sbjct: 4 VYFHVDVNSAFLSWSALKKLRAGETLDLRTVPSAVGGDEEKRHGVVLAKSSPAKKFGVRT 63 Query: 52 GDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR 111 G+ F + ++ +++ Y S +++ L + +P VE YSIDEAF D+TG Sbjct: 64 GESLFSARLKCPE--LIVTPPDFDFYVQNSKALIAILRDYTPDVEQYSIDEAFLDMTGTE 121 Query: 112 NCRDLT-DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 IR V + TV +G+A + LAK+A+ K + T E Sbjct: 122 ALFGPPLTVAHTIRNRVREELGFTVNIGVASNRLLAKMASDFEKPDKVHT------LFPE 175 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 M LPV ++G+G K+L+ GI T+ DLA T+ R I F + Sbjct: 176 EVPDKMWPLPVGSLFGVGPSAVKRLNQCGIYTIGDLARTERRVIVGIFGTRGDTLWNYAN 235 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G + + S + + +T + + +LR++ + R ++ Sbjct: 236 GREADPVTKQTTRDNTYGNSVTLPQDLTRPEQADATLLALCDSVGRRLRTDGKTARVVTV 295 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 + + F S L PT + + A + + +W G + GV Sbjct: 296 QLVDNAFR------RTSHQRTLPDPTNSTDRLYEVALQLMRQMW-PGRPVRLVGVSAEKT 348 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 + QL+LF D R E+L D L K G + A Sbjct: 349 GTDNFEQLDLFTDTTRRQKQEKLDRTADALRRKFGGAAVTRAKLLTPDTRAP 400 >UniRef50_P54560 DNA polymerase IV 2 n=8 Tax=Bacillales RepID=DPO42_BACSU Length = 412 Score = 303 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 100/414 (24%), Positives = 168/414 (40%), Gaps = 20/414 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + L D+ +FYAS E P L +PV+V + G V+A AK GV ++ Sbjct: 6 VIFLVDMQSFYASVEKAENPHLKNRPVIVSGDPEKRGGVVLAACPLAKQKGVVNASRLWE 65 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 ++ V + Y D+S ++ + LEE + VE YSIDE F D+TG + Sbjct: 66 AQEKCPE--AVVLRPRMQRYIDVSLQITAILEEYTDLVEPYSIDEQFMDITGSQKLFGTP 123 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH-AAKKWQRQTGGVVDLSNLERQRKL 175 + + I+ +++ + VGI K LAK+A AKK + G+ L E + Sbjct: 124 MEIAKSIQGRIMREIGVYARVGIGPNKALAKIACDNFAKKNK---NGIFTL-TKENMKTE 179 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 M LPV ++G+G R+ L+ MGI T+ LA + ++K + + G Sbjct: 180 MWPLPVGSMFGVGSRMKHHLNRMGISTIGGLAAFPLDLLKKKWGINGHVLWMTANGIDYS 239 Query: 236 QLEEFA-PTKQEIICSRSFGERITDYP-SMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + + ++ I + + ++ + + + R+ + +S + Sbjct: 240 PVSTSSLDGQKAIGHGMTLPRDYEHFDKEIKVVLLELSEEVCRRSRNAGVMGQTVSVSCR 299 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 + F G + VKL PT ++D+ A R W G ++ GV L S Sbjct: 300 GADFD---WPTGFNRQVKLAEPTNSTQDVYEAVRRLFLTFWD-GKPVRRLGVNLSQLSSD 355 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + QLNLF L VMD + + G + A +RA Sbjct: 356 DIWQLNLF---QDYAKKMSLGYVMDGIKNRFGDTAIIRAASLTAAGQAFERAAK 406 >UniRef50_C4G590 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=C4G590_ABIDE Length = 447 Score = 303 bits (776), Expect = 7e-81, Method: Composition-based stats. Identities = 86/418 (20%), Positives = 156/418 (37%), Gaps = 36/418 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFKQ 58 D N FYAS E + P+L GKPV V N G V+ + AK GVK G ++ Sbjct: 23 ILHSDCNCFYASVELLHHPELRGKPVAVGGNPEARHGIVLTADYTAKRYGVKTGMALWQA 82 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLT 117 K + ++ +LY S E + ++E + IDE++ D++ D Sbjct: 83 KQVCPD--IIFLPPRMDLYLRFSRMAQEIYSEYTDKIEPFGIDESWLDVSESAGIKGDGY 140 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +EI + + +TV +G++ K AKL + K T G + + Sbjct: 141 AIAKEISERMKKELGITVSIGVSFNKIFAKLGSDYKKPDAITTMG------KDEYKAKAW 194 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV ++ +GR S+K MGIKT+ DLA D + K + G + Sbjct: 195 PLPVANLLYVGRATSRKFADMGIKTIGDLATMDEGILIKKLGKIGSVLHAFANGYDDSPV 254 Query: 238 EEFA--PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + + S + + + ++ + A A +LR CR + ++ Sbjct: 255 KLENTSAPVKSVGNSTTTPKDMKTDEDVKIVLYILAESVAARLRENGFRCRTVEISLR-- 312 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG---------------HRY 340 ++ + S VKL + + +I AA ++ Sbjct: 313 ----DKELFHFSKQVKLKNASNITAEIAEAAYLLYKKNYRLPADEEELKNSIPEFYQKPL 368 Query: 341 QKAGVMLGDFF-SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 + G+ D Q+++F + R ++ +DT+ + G ++ Sbjct: 369 RSIGICGTDLVTDYYWEQMDIFMNPRLREKQMKMDITVDTIRKRFGFYSIQRGLMYRD 426 >UniRef50_C7H2N6 DNA polymerase IV n=8 Tax=Bacteria RepID=C7H2N6_9FIRM Length = 411 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 89/410 (21%), Positives = 155/410 (37%), Gaps = 20/410 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + CD+N FYAS E + P+L KPV V + G V+A+N AKA GV G+ ++ Sbjct: 4 VILHCDMNNFYASVECMLNPELKNKPVAVCGSVEERHGIVLAKNYAAKAFGVSTGEAIWQ 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K + +V +YE Y S + ++E Y +DE + D+TG Sbjct: 64 AKQKCQD--LVIVEPHYEQYMKFSKLAREIYGRYTDQIEPYGMDECWLDVTGSGCMGTGF 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + EIR TV LT+ G++ K AKL + K + R+ + Sbjct: 122 EIADEIRRTVKFELGLTISAGVSFNKIFAKLGSDMKKPDAI------TCIEADSFREKIW 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 P D+ G+GR K L + GI T+ +LA T F++ + G + Sbjct: 176 CHPASDLLGVGRATEKVLSSYGIHTIGELAATSDDFLKCRLGKNGLVIKKYANGLDDSPV 235 Query: 238 --EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ + I + + + + + + KLR+ + I+ I+ Sbjct: 236 MRSDYVSPVKSIGHGITTMQDLENNAEVWCVMLELVQEIGTKLRAHKKKAGGIAISIR-- 293 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF-FSQG 354 N Y ++ PTQ + A +Q H + V + Sbjct: 294 ----NNELYTKEWQCRIGIPTQSPTYLAKTAFALFAKNYQWEHPIRSVTVRAINLFEEDC 349 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 Q +LF D E+L ++ + + G+ + + + +R Sbjct: 350 PIQYDLFTDVKSLDRQERLDAAIEQIRFRFGKDAIKNGVLFQKSKMPTER 399 >UniRef50_C5D272 DNA-directed DNA polymerase n=5 Tax=Geobacillus RepID=C5D272_GEOSW Length = 414 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 90/365 (24%), Positives = 159/365 (43%), Gaps = 20/365 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAK-ALGVKMGDPWF 56 + D N+F+ASCE P L GK VVV + G V+A N AK G+ P + Sbjct: 11 VIFHVDCNSFFASCEIARDPSLKGKAVVVAGDPKERKGVVLAANYIAKQRFGIYTTMPLW 70 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + K + +V ++ LY ++S +V L +P +E SIDE + D+T + Sbjct: 71 EAKKRCPQ--LVVLKPDFHLYREISEKVFQFLATFTPVLERASIDEGYLDITDCYSLGSP 128 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 D +I+ +LQ H+ V +GIA K LAK+A++ K + K++ Sbjct: 129 LDIAEQIQKELLQTLHIPVSIGIAPNKFLAKMASNMKKPLGI------TVLRKRDVPKVL 182 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV ++ GIG + +KKL+++GI T+ +LA + ++ + R G Sbjct: 183 WPLPVQEMHGIGDKTAKKLNSIGIFTIGELAKAEKVTLQNLLGITGVRLKEWANGIDPRP 242 Query: 237 LEEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ + K + I S + +T+ + + + A + +++ + + I+ S Sbjct: 243 VDPESGEKWKSIGSSTTLPRNVTEERILLEVLRDLAQSVSNRMKQKGVVSSTVQIMIRYS 302 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + S P Q++ +I A L W G+ + G+ D F + Sbjct: 303 NFQ------TITRSKTWENPFQEAEEIFQRAVYLLKRHWN-GNPVRLLGITAVDVFDKKE 355 Query: 356 AQLNL 360 A L Sbjct: 356 AVKQL 360 >UniRef50_B8DIF6 DNA-directed DNA polymerase n=6 Tax=Desulfovibrio RepID=B8DIF6_DESVM Length = 481 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 98/361 (27%), Positives = 154/361 (42%), Gaps = 18/361 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E + P L GKPV V ++ G V A + EA+ GV+ P L Sbjct: 6 IMHIDMDAFFASVEQMDDPSLRGKPVAVGGSHRGVVSAASYEARRFGVRSALPMSTALRL 65 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDFG 120 ++ YA++S+R+M L E SP VE S+DEA+ D TG+ + G Sbjct: 66 CPH--LIVVPGRMRRYAEISHRIMDALREFSPLVEPASVDEAYLDATGLERLFGPVENMG 123 Query: 121 REIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++A VL T LT VG A K LAK+A+ K + + E + + L Sbjct: 124 MAVKARVLDVTGGLTCSVGAAPVKFLAKIASDVNKPNG------LFILYPEDVAEFLRTL 177 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + G+G+R L+ +G++ D+ F + F G ++E Sbjct: 178 PVGRIPGVGKRSLDALEQLGVRFAGDVLRYSREFWERRFGKGGVHLHERASGVDPREVEP 237 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + +F E D +R+ + + A R LR + R I+ +K + F Sbjct: 238 YSEP-KSESAENTFSEDTADRAVLRRWLLAQAERVGASLRRQRLAGRTITLKVKYADFR- 295 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 S S L PT + I + A R LDA+ A + GV + +F Sbjct: 296 -----SISRSHSLPEPTASTETIFDEACRLLDALTLADK-VRLIGVGVSNFGPAHHGPRQ 349 Query: 360 L 360 L Sbjct: 350 L 350 >UniRef50_C9LBG3 DNA polymerase IV n=6 Tax=Clostridiales RepID=C9LBG3_RUMHA Length = 426 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 99/410 (24%), Positives = 171/410 (41%), Gaps = 26/410 (6%) Query: 1 MFALCDVNAFYASCETVFRPD------LWGKPVVVLS---NNDGCVIARNAEAKALGVKM 51 + DVN+ + S E V+R + L P V G ++A++ AKA GVK Sbjct: 7 VIFHIDVNSAFLSWEAVYRLEQGGTVDLREIPCAVGGDKTKRRGIILAKSLSAKACGVKT 66 Query: 52 GDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR 111 G+P + ++ S+++ +Y S + ++ L E SP VE YSIDEAF D+TG+ Sbjct: 67 GEPLTEALKKCPS--LIVVSAHHSMYRQYSQKFLNILREYSPSVEQYSIDEAFMDMTGME 124 Query: 112 NCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 F +++ + + TV +GI+ K LAK+A+ K + T Sbjct: 125 KLIGNPVAFAHKLKNRISKELGFTVNIGISGNKYLAKMASDFEKPDKVHT------LFPT 178 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 + M LPV D+ +GR ++ L +GI T+ DLA+TD+ ++ H E Sbjct: 179 EIKTKMWPLPVSDLLFVGRATTQVLKKLGIYTIGDLANTDVEILKCHLKKQGESIWNFAN 238 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G +E + + S + +TD + + + S A +LR + +S Sbjct: 239 GRDTSLVESESQGNKGYGNSTTIAFDVTDEGTAKMVLLSLCETVAARLRKDDVKAEVVSV 298 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 ++ F S + PT + +I + D +W G + GV Sbjct: 299 SVR--DFE----MKTVSHQRVMAAPTNITGEIYDTVCVLFDELWD-GMPIRHLGVHTSRV 351 Query: 351 F-SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + Q++LFD N E++ +D + K G + A ++ Sbjct: 352 SKEERGRQMSLFDLNTNYEKMEKMDMAVDKIRKKFGNNAIMRASFLDNKK 401 >UniRef50_A4CII2 DNA polymerase IV n=20 Tax=cellular organisms RepID=A4CII2_9FLAO Length = 366 Score = 302 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 161/372 (43%), Gaps = 18/372 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E +P+L G+P+ V G V A + EA+ GV+ + + Sbjct: 10 IIHIDMDAFFASVEQRDQPELRGRPIAVGGGAKRGVVAAASYEARTFGVRSAMSGVQARR 69 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDF 119 L +V ++ Y ++S ++ E + VE S+DEA+ D+T R T Sbjct: 70 LCPE--LVFVKPRFDRYREVSRQIRGIFLEYTDLVEPLSLDEAYLDVTANRKGMPSATLI 127 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 REIR +L+ T LT GI+ K +AK+A+ K ++T E ++ + +L Sbjct: 128 AREIRRRILEETGLTASAGISVNKFIAKVASDFNKPNGQKT------VPPEDVQEFLESL 181 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + G+G+ ++K++A+GI T DL F+ HF R +RG ++ Sbjct: 182 EIRKFHGVGKVTAEKMNALGIFTGADLRRQSEHFLTGHFGKSGHHYYRVVRGVHDSPVQP 241 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + R+F E ++ M + + A + +LR+ ++ + I+ I+ S F+L Sbjct: 242 SRVP-KSLGAERTFSENLSSEVFMVEKLTKIAEELSRRLRTRNRSGKTITLKIRYSDFSL 300 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S L I+ AA L + G+ L + ++ + Sbjct: 301 Q------TRSRTLAEYIDSPERILAAARDLLYQQPLEN-SVRLLGISLSNLDTEKEKTES 353 Query: 360 LFDDNAPRPGSE 371 D + + E Sbjct: 354 GEDSVSVQLKFE 365 >UniRef50_C8NE97 DNA-directed DNA polymerase n=2 Tax=Granulicatella RepID=C8NE97_9LACT Length = 352 Score = 302 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 87/362 (24%), Positives = 151/362 (41%), Gaps = 19/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+AS E P+ GKPV+V N G V + EA+A GV+ P K Sbjct: 4 ILHVDMDAFFASVEQREHPEWRGKPVIVGGKPNERGVVSTCSYEARAFGVRSAMPTAKAM 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 L + NY LY ++S++V + + +E SIDEA+ D+T T Sbjct: 64 KLCP--KAILTPGNYSLYKEISSQVREVFKSFTNMIEPLSIDEAYLDVTNNSRGIASATL 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+ V ++T LT VG++ K LAK+A+ K + E ++ + Sbjct: 122 VAHLIQKEVYEKTGLTCSVGVSFNKFLAKMASGYQKPSGI------TVITPENAQEFIRT 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 +P+ D +G+G+ ++KL GI+T DL + F + R ++RG QL Sbjct: 176 IPIGDFYGVGKVSAEKLRRAGIETGEDLLHLSKAELESRFGNLGPRLYAQVRGISNDQLT 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + ++ + R+ + TD+ + + + ++ A L+ R IS ++ S F Sbjct: 236 LY-RERKSMGSERTLIKDTTDHGILSEYLEKFSLEIASMLQKRALASRTISLKLRDSNFN 294 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 S SV L +I+ A + + + + G+ + Sbjct: 295 ------TTSKSVTLRDYFNKKEEILQLALQLFEEMMDE-KPIRLIGLSVSHLEKTDKIYK 347 Query: 359 NL 360 L Sbjct: 348 QL 349 >UniRef50_Q4FMY4 UmuC n=6 Tax=Bacteria RepID=Q4FMY4_PELUB Length = 426 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 173/421 (41%), Positives = 250/421 (59%), Gaps = 6/421 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N+FY SCE +F P + KPVVVLSNNDGC+IAR+ EAK LG+KMG+P+FK K++ Sbjct: 10 IALVDCNSFYVSCERLFNPKIRNKPVVVLSNNDGCIIARSNEAKFLGIKMGEPYFKAKEI 69 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + V FSSNY LY D+S RVM TL+ +P +EIYS+DEAF DL+ + + D G+ Sbjct: 70 ILKNKVYVFSSNYSLYGDLSRRVMRTLKRFNPELEIYSVDEAFLDLSNYPDDE-VEDVGK 128 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 EIR+ +LQ T + +GIA+TKTL+K+ANH AKK + GV +L +E L+ + + Sbjct: 129 EIRSIILQWTGIPTSIGIAKTKTLSKIANHIAKK---KQSGVTNLIGIENIDPLLEKIDI 185 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +DVWG+G++++K GI L + +I+K NV+ RT ELRG PC+ LE Sbjct: 186 NDVWGVGKQMTKFYHQNGIYNAKQLKNMSNTWIKKSSNVLSSRTALELRGIPCIPLETKT 245 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++ + SRSFG R+ + + +A+ SY A+EK+RSE + I+ ++TSPF Sbjct: 246 SKRKSCVVSRSFGTRVEKFQELEEAVASYCLNASEKIRSESLIAKSITVSVRTSPFQNRG 305 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 YY N+ ++ T +S +I+ A +L+ I+ G+RYQKAG+ L S NLF Sbjct: 306 VYYSNAKTIDFPIATNNSIEIVKTALIALNEIFINGYRYQKAGITLTGLVSSSG-SKNLF 364 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 + LM +D+ N K GR TL A G+ ++W M+R S T L + Sbjct: 365 S-TEKDEKIKGLMRSIDSTNYKYGRSTLSLASAGVNKKWNMRRDHSSKIDTANFHSLPII 423 Query: 422 K 422 K Sbjct: 424 K 424 >UniRef50_B9MMT7 DNA-directed DNA polymerase n=2 Tax=Clostridia RepID=B9MMT7_ANATD Length = 411 Score = 300 bits (769), Expect = 5e-80, Method: Composition-based stats. Identities = 92/405 (22%), Positives = 161/405 (39%), Gaps = 21/405 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + CD+N FYAS E +++P+L KPV V G V+A+N AK+ G++ GD ++ Sbjct: 4 VILHCDLNNFYASVECLYQPELRNKPVAVCGESELRHGIVLAKNQIAKSYGIQTGDVIWQ 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDL 116 +V N+ LY S V E + +E + IDE + D++ R Sbjct: 64 ALKKCP--NLVILKPNFPLYIRFSKLVQRIYSEYTDLIEPFGIDECWLDVSQSTGILRSG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 EI+ + LTV VG++ K AKL + K V + E ++++ Sbjct: 122 RKIAYEIKERIKSELGLTVSVGVSFNKVFAKLGSDYKKPDA------VTVITKENFKQIV 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP D+ +G KKL + I T+ D+A + ++++ E G Sbjct: 176 WPLPAKDLLYVGSATEKKLSSRAIYTIGDIAKSSPEYLKRILGKWGEVLWIFANGLDTTP 235 Query: 237 LEEFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + I S + +T Y I + A++LR ++ C + +I+ Sbjct: 236 VTPPLFEDNIKGIGNSITLPRDLTCYEDAEYVIRMLSESVAQRLRQQYLKCYTVQVWIR- 294 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + + KL PT +R+I A W + + GV D Sbjct: 295 -----DSFLFSITRQEKLKNPTFLAREISQKAFEIFKKHWNFKNSIRSLGVRALDLVCAN 349 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + L D+ + EQL +D + + G+ + A + Sbjct: 350 -SFYQLEFDSLKKFKLEQLEKTVDQIRRRFGQSAVLPAILLTKSD 393 >UniRef50_D0KZ56 DNA-directed DNA polymerase n=12 Tax=root RepID=D0KZ56_HALNC Length = 439 Score = 300 bits (767), Expect = 7e-80, Method: Composition-based stats. Identities = 197/423 (46%), Positives = 269/423 (63%), Gaps = 5/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FY SCE VF P L +PVVVLSNNDGC +AR+AEAKALG+ MG PWF+ + Sbjct: 17 VFALVDGNNFYVSCERVFNPALEARPVVVLSNNDGCAVARSAEAKALGIAMGQPWFQIQS 76 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + + G++ SSNYELYADMSNR+M L + SPR E+YSIDE F DL G+ DLT Sbjct: 77 MAQSHGLIALSSNYELYADMSNRMMRILADFSPRQEVYSIDECFLDLRGM--DVDLTLLA 134 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG-GVVDLSNLERQRKLMSAL 179 +R V Q + VG+GI ++KTLAKLANH AKK + G + Q +LM+ + Sbjct: 135 HGMRQRVAQWIGIPVGIGIGESKTLAKLANHLAKKQPQWQGVCDLTTLEESAQDRLMACV 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V DVWG+GRR+ ++L+A GI T LDL D I++ F+VVL RTVREL+G CL LE Sbjct: 195 DVGDVWGVGRRLKEQLNARGIVTALDLKRADPVIIQRQFSVVLARTVRELQGISCLPLES 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q+II SRSFG+ + P +RQAI ++ +RAAEKLR++ + + FI+TSPF+ Sbjct: 255 MVAPRQQIIVSRSFGKPVWYLPELRQAITAHMSRAAEKLRTQASVAQMVQVFIRTSPFSA 314 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ-GVAQL 358 P+Y ++ L + D+R ++ A + L I++AG+ YQK GV+L D + A+ Sbjct: 315 -RPFYSQGITLPLAAASDDTRLLVKIAQQGLTRIYRAGYDYQKVGVLLMDIQPKGQGART 373 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 +LF D ++QLM +D++NA+ G+ TL AG+G Q W MKR +P YTT L Sbjct: 374 DLFHDAQHDRRTDQLMQTLDSINARMGKHTLKLAGEGFVQPWAMKRNRHTPAYTTNIRQL 433 Query: 419 LRV 421 R Sbjct: 434 ARA 436 >UniRef50_D1PC12 UmuC protein n=2 Tax=Bacteria RepID=D1PC12_9BACT Length = 461 Score = 300 bits (767), Expect = 8e-80, Method: Composition-based stats. Identities = 186/462 (40%), Positives = 251/462 (54%), Gaps = 43/462 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M L D N FY SCE VFRPDL GKPVVVLSNNDGCVIAR+ EAKALG KMGDP+++ K+ Sbjct: 1 MIGLADCNNFYCSCERVFRPDLTGKPVVVLSNNDGCVIARSEEAKALGYKMGDPFYQVKE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 GV FSSNY LY +SNRVMS L SPR++ YSIDE+F + + Sbjct: 61 KLEAEGVAIFSSNYTLYGSLSNRVMSMLSHYSPRIDQYSIDESFFEADESMAKVFFREHA 120 Query: 121 RE---------------------------IRATVLQRTHLTVGVGIAQTKTLAKLANHAA 153 + I A VL+ + + VGIA+TKTLAK+ + A Sbjct: 121 EDHPTLFNKMTIDELSEKPDSLLHRYGSKISADVLRAVGIPISVGIAETKTLAKIGSKFA 180 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF 213 KK++ G + ER+ K +S PV+DVWGIGR+I++KLD MGI+T AD + Sbjct: 181 KKYKGFQ-GCCLIDTDERRHKALSLFPVEDVWGIGRQIARKLDYMGIRTAAQFADKKESW 239 Query: 214 IRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG-ERITDYPSMRQAICSYAA 272 +R HFN+ RT +EL GE C+ +EE P K+ I SRSF E ITD + +A+ ++A Sbjct: 240 VRSHFNITTLRTWKELNGESCISIEE-LPQKKSICTSRSFANEGITDKNVIEEAVANFAV 298 Query: 273 RAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 R EKLR + C+ I+ F TS F + P Y S+ L T +I+ AA L A Sbjct: 299 RCTEKLRRQGSVCQGITVFAWTSRFNEHVPEYTIHDSLTLPIATNAQEEIVGAALSILRA 358 Query: 333 IWQAG------------HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + ++KAGV+L Q +LFD ++LM +D + Sbjct: 359 KYPKPMADSRPDRSDMSFHFKKAGVILWQISPDHPRQQDLFDPIDRS-KQKKLMEAIDAI 417 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 N K G GT+ A QG ++ +KR +S ++TT D+L+VK Sbjct: 418 NRKNGYGTIRQAIQGTDCRFDLKREYMSKQFTTNIHDILKVK 459 >UniRef50_Q7USY7 DNA polymerase IV n=1 Tax=Rhodopirellula baltica RepID=DPO4_RHOBA Length = 396 Score = 300 bits (767), Expect = 9e-80, Method: Composition-based stats. Identities = 105/411 (25%), Positives = 171/411 (41%), Gaps = 22/411 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 M D++AFYAS E RP+L G+PVVV + G V A + EA+ G+ P + Sbjct: 1 MILHVDMDAFYASVEQRDRPELRGRPVVVGGSEGRGVVTAASYEAREYGIHSAMPGSRAI 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L V ++ YA + V +P V+ S+DEAF D++G + Sbjct: 61 KLCPHADFVRGRLDH--YASVGRAVREIFHRFTPVVQPLSLDEAFLDVSGTIRLHGSPRE 118 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 G IR T+ + L VGIA K +AK+A+ K + R+ + Sbjct: 119 IGINIRETIRRELDLPASVGIAPLKFVAKIASDIGKPNG------FVEVPADGVREFLDP 172 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV +WG+G+ KL +G +T+ DL D+ ++ E G Q+ Sbjct: 173 LPVSRLWGVGKVGQTKLQRLGYRTIADLRVKDLDALKSQLGRWGEHLWNLANGIDRRQVV 232 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I R+F E ++D S+ + + + A +LR + I+ + F Sbjct: 233 -VDHLAKGIGHERTFAEDLSDIESLNAVVSYLSEQTARRLRRARRLASTITLKYRREDFQ 291 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDFFS-QGVA 356 S + KL TPT + +I+ A L + + + G+ LG Sbjct: 292 ------TFSRARKLSTPTDSTLEILQVAEELLLEMRSREPRSVRLLGISLGGLTDADAPK 345 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QL+LF + S ++ T+ D + K G+ +LY A QW ++ Sbjct: 346 QLHLFGEETGENASSKVDTLSDQIATKLGKHSLYRASS---HQWVDRKNTK 393 >UniRef50_C6VYA9 DNA-directed DNA polymerase n=15 Tax=Bacteroidetes RepID=C6VYA9_DYAFD Length = 372 Score = 299 bits (766), Expect = 1e-79, Method: Composition-based stats. Identities = 75/359 (20%), Positives = 143/359 (39%), Gaps = 18/359 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P+ GKP+ V + G V + EA+ GV+ P + Sbjct: 13 IIHIDMDAFYASVEQRDFPEYRGKPLAVGGSPTGRGVVATASYEARKFGVRSAMPSRQAI 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 L + ++ +E+Y +S + + +E S+DEA+ D+T + + Sbjct: 73 QLCPQ--IIFVHPRFEVYKSVSRSIREIFSRYTDLIEPLSLDEAYLDVTEDKMGIGSAME 130 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++I+ + + HLT G++ K +AK+A+ K + + + M Sbjct: 131 IAKQIKQAIQEELHLTASAGVSVNKFVAKIASDIHKPNG------LTFIGPSKIERFMDQ 184 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV+ G+G+ + K+ M + T DL + HF R +RG +++ Sbjct: 185 LPVEKFHGVGKVTADKMKGMQLFTGSDLKKLTEEELVNHFGKTGHFYYRIVRGIDDREVQ 244 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + +F +T M + + A +L ++ R ++ +K S F Sbjct: 245 T-HRETKSLGAEDTFTYDLTTPDEMNKELDRIGVTVANRLETKKLKGRTVTLKVKFSDFT 303 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + + P D I + A + L+ + G + G+ L +F V Sbjct: 304 Q------ITRNHSFAHPVGDLDTITDTAKQLLEKLDLEGKAVRLLGISLSNFHEPEVKY 356 >UniRef50_Q1IRF1 DNA-directed DNA polymerase n=2 Tax=Acidobacteria RepID=Q1IRF1_ACIBL Length = 425 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 93/413 (22%), Positives = 157/413 (38%), Gaps = 23/413 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AF+ S E +F P L GK VVV + G V A + A+ GV P Sbjct: 17 VIFHVDMDAFFVSVEELFDPSLKGKAVVVGGHRDERGVVSAASYAARKFGVHSAMPLRTA 76 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT- 117 L + + + E Y + S + L++ SP+VE+ SIDEA+ D+TG Sbjct: 77 AKLCPD--AIFVNGHPERYREYSGKAFEVLKKFSPKVEMASIDEAYLDMTGTERLHGPPL 134 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + + T L +GI ++ +AK+ + AK ++ ++ Sbjct: 135 KAAHALHQFMKSETKLNCSIGIGTSRLIAKVCSDQAKPNGVLY------IVPGQEASFLA 188 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC--- 234 L V + G+G+ +KL+ +GIK V DLA D F+R+ F + RG Sbjct: 189 PLSVRKIPGVGKVFEQKLNEIGIKKVGDLAKLDDAFLRERFGEWGLALAGKSRGLDAGGY 248 Query: 235 -LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + + I +F D + I + ++R + R + ++ Sbjct: 249 FDRDVAVDEGPKSISHEHTFNTDTRDQEKLEAMIARLSEMVCRRVREHELHARTVQIKLR 308 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 S F + + L PTQ + A WQ G + GV + F Sbjct: 309 YSDFT------TITRAHSLEQPTQLDTVVAETARTLFRDNWQRGRTIRLIGVHVAGF-DD 361 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 QL+L S+ L +V+D + K G + A + + Sbjct: 362 VPQQLDLLTQTHDDKVSKAL-SVVDRMRDKFGENAVSLATGLKSRFREKTHEN 413 >UniRef50_Q30X29 DNA-directed DNA polymerase n=8 Tax=Proteobacteria RepID=Q30X29_DESDG Length = 492 Score = 299 bits (765), Expect = 1e-79, Method: Composition-based stats. Identities = 182/441 (41%), Positives = 247/441 (56%), Gaps = 20/441 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D N+FY SCE VFRPDL +PVVVLSNNDGC+IAR+AEAKALG+ MG PWFK + Sbjct: 53 LYALVDCNSFYVSCERVFRPDLVRRPVVVLSNNDGCIIARSAEAKALGIPMGAPWFKVRR 112 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTD 118 GV FSSNY LY DMS+RVM LE P V +YSIDEAF L + Sbjct: 113 HAESAGVTVFSSNYALYGDMSSRVMRVLERFCPDVHVYSIDEAFMRLDSLIMPPGMSPER 172 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK----------KWQRQTGGVVD--- 165 + +R V +RT + V VG+ TKTLAKLAN +K + GV + Sbjct: 173 YAACLRREVYRRTGIPVSVGLGCTKTLAKLANRLSKQQNAGARAMVPAAFRYAGVFNFGA 232 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 +++ + L+ L V DVWG+G R + +L GI+T L D +R++ +V T Sbjct: 233 VTDPDVMDALLETLDVTDVWGVGARHAGRLRTWGIRTARALRDAPDDRVRRYMSVTGLHT 292 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 V ELRG CL L++ P+++ ++ SRSFG +T M +A+ +Y RAAEKLR E Sbjct: 293 VLELRGISCLPLDDAPPSRRSVVSSRSFGTLVTHKEHMLEAVTAYMTRAAEKLRREQLEA 352 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 + I T + P Y +SA V+L PT + +I A L++IW+ G+RYQKAGV Sbjct: 353 HCVGVMISTPRH-GDGPRYADSAQVQLAVPTSHTPQLIVRARALLESIWRDGYRYQKAGV 411 Query: 346 MLGDFFSQGVAQLNLFDDNAPR----PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 ML S Q+++ +LM D +NA+ GRGTL +A G+ + W Sbjct: 412 MLSGLESAVSRQVSMLPALQGTGRGLERGRRLMAAADAVNARFGRGTLEYAAAGLGRPWS 471 Query: 402 MKRAMLSPRYTTRSSDLLRVK 422 MK+ LSPRYT+ L V+ Sbjct: 472 MKQEHLSPRYTSDWKKLPLVR 492 >UniRef50_A5N2U5 DNA polymerase IV n=5 Tax=Clostridiaceae RepID=DPO4_CLOK5 Length = 400 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 89/411 (21%), Positives = 163/411 (39%), Gaps = 27/411 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + L D+NAF+ SCE+ P++ GKP V + G ++ N EA+ GVK K Sbjct: 4 VIFLVDMNAFFISCESTRHPEIIGKPAAVAGDPKNRSGIILTANYEARKFGVKTTMVLHK 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 L ++ ++ Y S VM L + +P +E SIDEA+ D+TG Sbjct: 64 VLKLCP--NIIIIPPDHCFYKQKSKEVMGILSKYTPVIEKNSIDEAWLDMTGCERIFGRS 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 I + L +GI++ K LAK+A+ K + + Sbjct: 122 YQTAECIMKHINSELGLDCSIGISENKFLAKMASQMKKPLGITK------LWKKDIELKL 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV+ + GIG++ ++KL M IKT+ +LA+ D R++ K V + G Sbjct: 176 WPLPVEFMNGIGKQTARKLREMKIKTIGELANFDRRYLIKKLGKVGAEIHQFANGIDVSP 235 Query: 237 LEEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + + I S + I+D S + + + + R ++ + IK S Sbjct: 236 VTPHSHKDVKSIGKSITLAHDISDIESAKVILMELSDKVGMTARKYNKKGHTVQINIKYS 295 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + + T ++I +A L+ W + G+ L F Sbjct: 296 NFQ------SITRQRTITE-TYLVKEIYSAGIEMLEKNWNERLPVRLLGISLSGFSKYNE 348 Query: 356 -AQLNLF------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 Q+++F ++ + +++ +D++ K G + + + Sbjct: 349 DEQISMFNMLEIDNEKSSVRKIDKIEAAIDSIRKKYGDSIIKSGSLIKKSK 399 >UniRef50_C9LNT4 ATP-NAD kinase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LNT4_9FIRM Length = 403 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 94/393 (23%), Positives = 161/393 (40%), Gaps = 21/393 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P+ GKPV+V + G V + EA+A GV P K ++ Sbjct: 5 IMHVDMDAFYASVEQRDHPEWRGKPVIVGGSSRRGVVATASYEARAFGVHSAMPAVKARE 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTDF 119 L V +++Y +SN + + + +E S+DEAF D++G+ L Sbjct: 65 LCPD--AVFVLPRFDVYKSVSNEIHEIMLHYAVEIEPLSLDEAFMDISGLCGKYETLGAV 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 GR I+A + ++T L GIA K LAKLA+ K + + +++++++ L Sbjct: 123 GRAIKAEIKEKTGLVASAGIAPNKFLAKLASDLDKPDG------LRIIPYGKEKEILAPL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G +KL G T+ D+ + R G +E Sbjct: 177 PVRRLWGVGHVTERKLRNAGFLTIGDIQKAPFAKLASVLGNQASLIQRLSFGIDDRAVEA 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I ++ + +T+ + + I ++ A++LR R IS ++ + F Sbjct: 237 SRRI-KSIGDESTYEKDLTESADIDRQIAIHSDVVAKRLRRHKLAGRTISLKVRFASFR- 294 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S+ L T +I AA I+ + GV + ++ Sbjct: 295 -----TVTRSLSLEEGTDLQEEIYAAALELKKRIY-MNEGVRLIGVTASNLAPPL-ETVD 347 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 LF R + VMD + K G L Sbjct: 348 LFS--TMREKQVKAAAVMDAIQEKFGEHALRKG 378 >UniRef50_Q19NE6 UV protection and repair protein n=9 Tax=Enterobacteriaceae RepID=Q19NE6_ECOK1 Length = 419 Score = 298 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 197/422 (46%), Positives = 269/422 (63%), Gaps = 4/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+ D+N YA+ E P L KP+++ SNND VIA N AK++G+K G P FK +D Sbjct: 1 MYMHVDINGAYAAFECAMDPKLSKKPLIIASNNDSSVIAMNKLAKSVGIKRGTPIFKCRD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ + SSN+ LY D SNR TLE +P+ YSIDE F L + D D+G Sbjct: 61 LIQQHRIEVRSSNFTLYEDYSNRFHETLESFAPQSSRYSIDENFMLLKNMNKIIDYEDYG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R IR+T+L LT GVG + TKTLAKL +A+K+W TGGVV L++ R RKL+ + Sbjct: 121 RLIRSTLLHNLSLTCGVGCSSTKTLAKLCTYASKRWA-ATGGVVVLTDQARIRKLLGLIS 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++WGIG++IS++L A GI T D ++D+RF+RK F V +ERT REL GEPC +L E Sbjct: 180 TREIWGIGQKISERLSAFGIITAGDFYNSDVRFLRKSFGVEIERTWRELHGEPCFRLHES 239 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P +Q+II SRSFG+R+ + + +A+ + ARAAE+LR + + R I+ FI++S +A Sbjct: 240 PPVRQQIIVSRSFGQRLNEIGKLHEAVSFFTARAAEQLRKDGSWTRQITVFIQSSNYAQG 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 E Y N L TQD+RD+++AA L+ I++ G Y KAGVML L+L Sbjct: 300 ENRYSNCGIEPLTA-TQDTRDLVDAAMTILNRIYKPGIAYAKAGVMLSAMTDGTEQ-LSL 357 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 FD+ RPGS+ LM VMD N KE RG L+ G+GIQQ ++MK+AMLSPRYTTR +LL Sbjct: 358 FDERPARPGSQALMKVMDRFN-KEKRGALFLLGEGIQQDFRMKQAMLSPRYTTRWDELLV 416 Query: 421 VK 422 VK Sbjct: 417 VK 418 >UniRef50_B6BWB3 DNA-directed DNA polymerase n=1 Tax=beta proteobacterium KB13 RepID=B6BWB3_9PROT Length = 414 Score = 298 bits (762), Expect = 4e-79, Method: Composition-based stats. Identities = 165/422 (39%), Positives = 240/422 (56%), Gaps = 10/422 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M AL DVN FY SCE VF L PVVVLSNNDGC+I+R+ EAKALG+KMG P+F+ +D Sbjct: 1 MIALVDVNNFYVSCERVFNRSLEYVPVVVLSNNDGCIISRSNEAKALGIKMGMPFFQAQD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ V +SSNY LYADMSNRVM L LS EIYSIDE+F + N ++ G Sbjct: 61 LIKKNNVHVYSSNYPLYADMSNRVMQLLAHLSQDQEIYSIDESFLKI----NQKNYLLHG 116 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD-LSNLERQRKLMSAL 179 + IRAT+L+ L V VG A+TKTLAKLAN+ AKK+ G V SN + KLM + Sbjct: 117 QHIRATILKNVGLPVCVGFAKTKTLAKLANYMAKKYPMFNGVVCFSESNPKTLTKLMCEI 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V ++WG+G R+ K+L+ +GI TV DL + +++++ F++ +ER V EL C +E Sbjct: 177 SVGELWGVGVRLKKRLNELGILTVHDLKTANAKWMKQMFSINIERMVYELNDIQCYPIES 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P +++I+CSRSFG++I Y M A+ ++ RA+ KLR + + ++ F++ +PF+ Sbjct: 237 IKPDQKQIVCSRSFGQKINRYEDMADAVATFVQRASIKLRKQQLTAKQMTLFMRNNPFSS 296 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 T + ++ A L+ I+ G Y KAG++LGD N Sbjct: 297 KHRMQHVIRLQH-YDYTDSHQQLLRLAMHGLEKIYHQGIDYHKAGIILGDLR----RATN 351 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 L D + +P L +D + K + Q +W M++ S ++TT +LL Sbjct: 352 LNQDYSAKPEGHHLSNTIDAIRDKYHANIIMSGWQSKDGKWHMRQLNKSLKFTTSWLELL 411 Query: 420 RV 421 Sbjct: 412 EA 413 >UniRef50_D1C0B2 DNA-directed DNA polymerase n=2 Tax=Actinomycetales RepID=D1C0B2_XYLCX Length = 430 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 105/406 (25%), Positives = 165/406 (40%), Gaps = 20/406 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+A CE RP+L G PV+V G V+A EA+ GV+ P L Sbjct: 23 IMHVDMDAFFALCELARRPELRGLPVIVGGRGRGVVLAATYEARVFGVRSAMPMVSAMRL 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-FG 120 + +V ++ Y D+S VM+T+ E++P VE SIDEAF D++G R G Sbjct: 83 CPQAVIV--PPDHRRYTDVSRSVMATMAEITPIVEQISIDEAFLDVSGARRRLGPPTVIG 140 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +RA V +T VGIA+ K LAKLA+ AK L E + LP Sbjct: 141 ARLRAHVQAVHGVTCSVGIAKNKFLAKLASTHAKPDGM------LLVPDEASVPFLRTLP 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 V +WG+G + L GI +V LADTD+R ++ V G + Sbjct: 195 VGALWGVGEKTEAVLARWGITSVAQLADTDVRTLQAAVGVVHGAHLHDLAWGRDPRPVVP 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I +FG D ++ + + A + R + R ++ ++T+ F Sbjct: 255 TERER-SIGNETTFGSDQHDLAAVEARLLELCDKVAARCREQGVVTRTVALKVRTNDFR- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S L PT +RD+ A L A+ G + GV + + Sbjct: 313 -----TLTRSRTLDGPTDVARDLYRVARELLAAVDLRGLPVRLVGVRAENLQERAGTAQQ 367 Query: 360 L---FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 L + + +D + + G ++ G+ Q Sbjct: 368 LTLDEAASERPQAHREAELALDAVRERFGTRSIGLGAGGVASARQR 413 >UniRef50_Q2YI99 Nucleotidyltransferase/DNA polymerase n=3 Tax=Bacteroidetes RepID=Q2YI99_9BACT Length = 431 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 153/434 (35%), Positives = 234/434 (53%), Gaps = 15/434 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+ + D + Y SCE VFRPDL GKPVVVLSNNDGCV+AR+ EAK +G+K G P+F+ Sbjct: 1 MYGIIDCDNCYVSCERVFRPDLNGKPVVVLSNNDGCVVARSNEAKKMGIKAGTPYFQLAQ 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + + FSSNYELY +++ RV+ + + +P+ YSIDE F ++L G Sbjct: 61 QYPDAKIAVFSSNYELYGELTGRVVEIIRQEAPKYFRYSIDECFVYFNDFE-DKNLKSGG 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + + + V +G+A TKTLAK+A++ AKK+ + E+ K + P Sbjct: 120 ENLHKRIRKSVGMPVSIGLAPTKTLAKMASYFAKKYAGYRHC-CLIDTDEKWTKALKLFP 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 +++VWGIGRR + KL+A+G+ T D A ++R F+ +V+ RT +EL G + E Sbjct: 179 INEVWGIGRRYAAKLEALGVHTAYDFAQHHGDWVRATFHNIVIYRTWQELNGVDAVP-NE 237 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 K+ I SRSF +TD+ +++ + +YAAR AEKLR + ++ F+ T+ F Sbjct: 238 EMAKKKSICTSRSFNGMVTDFDTLKTHVSNYAARCAEKLRQQGTVASIVAVFLHTNLFRE 297 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + P Y N +L T + DI AA L +I+ G+ Y+KAGV++ QL+ Sbjct: 298 DLPQYWNFQEKRLTVGTNSTIDICKAANEVLQSIYVKGYHYKKAGVIVMGIGPNAPMQLD 357 Query: 360 LFDDN-APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW----------QMKRAMLS 408 LFD N ++L V+D +N G T+ Q Q+ +K S Sbjct: 358 LFDYNAEQFQKMKRLDAVIDRINKVNGTETIVLGSQQYTQKDGKGRAEVFANAIKHDYRS 417 Query: 409 PRYTTRSSDLLRVK 422 TTR SD++ +K Sbjct: 418 KNPTTRWSDIIHLK 431 >UniRef50_A6WU94 DNA-directed DNA polymerase n=28 Tax=Gammaproteobacteria RepID=A6WU94_SHEB8 Length = 418 Score = 296 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 178/423 (42%), Positives = 250/423 (59%), Gaps = 7/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N+FY S E VFRPD GKP++VLSNNDGC++A N +AK GV P+F+ KD Sbjct: 1 MFALVDANSFYCSAEQVFRPDWRGKPMIVLSNNDGCIVAANKQAKERGVPKFAPYFQVKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL-TGVRNCRDLTDF 119 L + GV+ SSNYELYAD+S ++M+ + +P +YSIDE+F + L Sbjct: 61 LCTKLGVIVCSSNYELYADLSAKMMNIIGRFAPEQHVYSIDESFLSFKNSYPAIKCLQAQ 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G+ IR V + T L V VGI T TLAK ANHAAKK GV + N + + ++ ++ Sbjct: 121 GQLIRKAVWKETRLPVCVGIGSTLTLAKAANHAAKKLPGYQ-GVCAIDNEQDRISILQSM 179 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V+DVWGIGRRISKKL+ M ++T DLA RK F++ +ERTVREL G+ C +E Sbjct: 180 SVNDVWGIGRRISKKLELMNVRTAYDLAKIPAGLARKQFSIEIERTVRELNGQACKVWDE 239 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 K++I +RS GERIT+Y + QA+ + A AA K R + C+ + F SP+ Sbjct: 240 ARADKKQIFSTRSVGERITEYEDLLQALSKHVAIAAAKARKQGSSCKTMLLFASNSPYDE 299 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + V T S ++I T++ +++AG RY K GV L D S QL+ Sbjct: 300 RPTGFKT--LVHFACATDCSIELIQGMTQAASQLFRAGVRYYKVGVGLIDLVSTQHGQLD 357 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 LF+ + +P LM +D +N + G TL+ A QGI+Q+W M+R +L+P+YTT+ L Sbjct: 358 LFNVSKAKP---ALMKTLDGINQRYGTDTLFIAAQGIEQKWAMRRDLLTPQYTTKWKCLP 414 Query: 420 RVK 422 +K Sbjct: 415 EIK 417 >UniRef50_A4ECH9 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECH9_9ACTN Length = 417 Score = 296 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 106/402 (26%), Positives = 178/402 (44%), Gaps = 24/402 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 L D++AF+AS E + P+ GKP++V + + G V + EA+ GV P + + Sbjct: 26 VGLMDLDAFFASVEMLDHPEWRGKPLIVGGDADSRGVVSTCSYEARRFGVHSAMPSAEAR 85 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L + + +++ Y ++S +VM+ L + +PRVE SIDEAF D+T G D Sbjct: 86 RLCPQ--AIWTHGHFDRYREVSAQVMAILADETPRVERVSIDEAFIDITPGRFAPEDPLQ 143 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R I V +T +G+ KT+AK+A+ K + + + +++ ++A Sbjct: 144 VARRISDRV-AALGVTCSIGVGCNKTVAKIASERDKPFG------LTIVRPGTEQRFLAA 196 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + GIGR ++L M I T+ +L+ + F V ER + G ++ Sbjct: 197 LPVSAMSGIGRSAEERLRRMRIYTLGELSRAPESTLASIFGVNGERMRQRALGLEISEVT 256 Query: 239 --EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + R+F + +T+ + AI +LR + ++ +K S Sbjct: 257 SLDEEREVKSVSNERTFAKDLTERGDIEAAIALLGESVGRRLRRQGLTGATVTLKLKYSY 316 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + +A +L PT D + A LD IWQ G + AGV + DF QG Sbjct: 317 GSGR------TAQRRLPHPTDDENIFVAVALELLDKIWQKGMHVRLAGVGMSDFDHQGGI 370 Query: 357 QLNLFDDNA----PRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 Q +LF + L +D + K G L F Q Sbjct: 371 QTDLFCEIDGRGAQSSDRRDLSVAIDAVRDKFGDTALSFGRQ 412 >UniRef50_A5D243 DNA polymerase IV n=4 Tax=Clostridia RepID=DPO4_PELTS Length = 402 Score = 296 bits (757), Expect = 1e-78, Method: Composition-based stats. Identities = 93/408 (22%), Positives = 167/408 (40%), Gaps = 22/408 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFKQ 58 L D+N+FYAS P L GKPV+V + G V+A + EAKA GVK G + Sbjct: 5 ILLADMNSFYASVHQAMEPRLKGKPVIVGGDPARRHGIVLAASVEAKACGVKTGMTVREA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT- 117 L + + + Y + S R++ +++ SP VE +SIDEAF D++G + Sbjct: 65 AALCPQG--IFLKPRHSHYINFSARIIRIMKDFSPLVEPFSIDEAFMDVSGCGLLFGSSL 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + +++A + + VG+ K LAK+A K + L + + Sbjct: 123 EIAVKLKARIKNEVGVLCSVGVGPNKLLAKMAAGMQKPDG------LTLLDFPDVPVKIW 176 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV +++G+G R+ K+L + I T+ DLA ++ +++ F +V G + Sbjct: 177 PLPVRELFGVGSRLEKRLRDLNIHTIGDLARYPLQVLKQKFGLVGHILHLSASGIDYSPV 236 Query: 238 EEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + + I + Y ++ I ++R R +S +K + Sbjct: 237 DPCSLERVRSIGHQITLPRDYWGYNEIKVVILELCEIVCRRVRLGGYAGRTVSLTLKDTD 296 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F S + + PT + ++ A + L W + GV L Sbjct: 297 FL------WLSRARTMNYPTASADEVYRVAVQLLHQHWPPWKPVRMVGVSLAGLVKNRAE 350 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 QL+LF + + +L D + + G ++ A +R Sbjct: 351 QLDLFGEA---ERARRLHAACDRIKDRFGEHSILRAVSLTPAGVLRER 395 >UniRef50_B2I3H3 Nucleotidyltransferase/DNA polymerase n=12 Tax=Acinetobacter RepID=B2I3H3_ACIBC Length = 442 Score = 295 bits (756), Expect = 1e-78, Method: Composition-based stats. Identities = 146/424 (34%), Positives = 225/424 (53%), Gaps = 4/424 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++AL D+N Y SCE +F P L KPVVVLSNNDGCV++R+ EAK LG+KMG PWF+ + Sbjct: 9 VYALVDINNCYVSCERLFNPKLNDKPVVVLSNNDGCVVSRSEEAKLLGIKMGVPWFQIEK 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCRDLTD 118 + GV +SSNY LYA+MS R + L E +E YSIDE F LT D++D Sbjct: 69 DALQAGVQVYSSNYTLYAEMSRRFFAVLGEFFSPDDLEAYSIDECFIHLTPYLQSIDISD 128 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL-SNLERQRKLMS 177 + ++R+T+L+ L +GI +KT AKLANH AKK + G + + LM Sbjct: 129 YCNKVRSTLLKWLGLPCCIGIGYSKTQAKLANHYAKKIKSFKGVCNFITLDPLIMEDLMQ 188 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 V +VWGIG ++ K+L + + T LDL + + K F+VV+ RT+REL+G+ C+QL Sbjct: 189 QTSVKEVWGIGYQLVKQLQSYEVYTCLDLTFANEHHMAKAFSVVMARTIRELKGQSCIQL 248 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ A + I+ SRSF + ++ ++QA+ + RA +L + Q C + + Sbjct: 249 DDPAIPTKRILASRSFAQALSSIEIIKQALIFHLNRAHRRLMKQEQLCACVQVML-YEKT 307 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 S ++ L T D + AA + +D +++ Y K GV+ ++ Sbjct: 308 DKPPYKKATSQAIGLHYATDDLCILTKAAMQQIDVLYKENKSYIKIGVLFCALHARQQHI 367 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 +L+ +QLM + T+ + G L WQMK+ S Y TR ++ Sbjct: 368 DDLWQPLELIHQRQQLMETLGTVRKRFGSHYLQVGYHSRNPSWQMKQCHRSKNYLTRWNE 427 Query: 418 LLRV 421 +L + Sbjct: 428 MLTI 431 >UniRef50_C0FVJ8 Putative uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FVJ8_9FIRM Length = 405 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 162/410 (39%), Gaps = 27/410 (6%) Query: 1 MFALCDVNAFYASCE----TVFRPD---LWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 + DVN+ + S E PD L V+ G V+A++ AK G+ Sbjct: 11 LIFHVDVNSAFLSWESAKRLRDNPDALDLRTINAVIGGDEKMRHGVVLAKSPSAKKYGIM 70 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + +V ++ELYA S + + LEE++P +E SIDEAFCD+TG Sbjct: 71 TGEPLSHARQKCPE--LVVVPPDHELYAASSRKFIEILEEVAPVIEQCSIDEAFCDMTGT 128 Query: 111 RNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 D F +++ + + TV +GI+ K LAK+A+ K + T Sbjct: 129 EKLYGDPIAFATKLKDRIYKELGFTVNIGISTNKLLAKMASDFEKPNRVHT------LFP 182 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 E LPV+ ++G G+ +K+L ++GI T+ LA D + + +F + Sbjct: 183 EEMATKFWPLPVESLYGCGKTTAKRLRSLGITTIGALAKADRQMLLSNFKSQGDYLWESA 242 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G + +P + S + +TD + + S ++R + Y + Sbjct: 243 NGISSSAVTAESPANKGYGNSVTLPYDVTDTENAHHILLSLCETVGARIRYDKAYISVVQ 302 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 I + F + + L + T + I AA + D W + GV Sbjct: 303 VQIVDNDF------HHRCKQLSLPSATNVTEKIYEAACNAFDQGWD-HAPIRLLGVSTSK 355 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + Q NLFD +L + +D + K G + A + Sbjct: 356 ATDESYEQYNLFDQ-DKFERLSKLNSAIDKIRDKYGDDAIVRACFADTHK 404 >UniRef50_B3E0C4 Nucleotidyltransferase/DNA polymerase UmuC n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0C4_METI4 Length = 421 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 161/422 (38%), Positives = 238/422 (56%), Gaps = 9/422 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F L D + FY SCE +F P L GKPVVVLSNNDGC+++R+ EAK LG+ MG P+F+ K+ Sbjct: 7 FCLVDCDNFYVSCERLFNPGLEGKPVVVLSNNDGCIVSRSNEAKLLGIPMGAPFFRWKEF 66 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 F++ GVV SSNY LY D+S R+M LEE +P VEIYSIDEA+ DL+ F R Sbjct: 67 FKQQGVVALSSNYALYGDISGRLMQLLEESAPCVEIYSIDEAWIDLSAHP---SPESFAR 123 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 E+R + + T + V +GIA TKTLAK+A+ AKK G+ L E + + L V Sbjct: 124 ELREKIRRWTGIPVTLGIAPTKTLAKVASKIAKK-TTALKGMNLLFGEEEIDQALRTLEV 182 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 D++WGIG R++ KL GI +DL + D IR+ F+V+LERTV ELR C LEE Sbjct: 183 DELWGIGARLAAKLKERGISKAVDLKNADPFKIRRLFSVMLERTVWELRAISCFGLEENV 242 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++I+ S++FG+ + +R A + +A KLR +S F++ PF Sbjct: 243 SPPKQILSSQTFGQTLFSLDELRAATAHFVKESARKLRQFGLAAHQLSVFLRHGPF---- 298 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 P Y SAS + + P D ++ A L A+++ Y K+GV+L D Q Q + + Sbjct: 299 PGYIESASFRFMEPIGDVIGLLEKADSLLQALYKPQRAYTKSGVILFDLLPQSCHQASFW 358 Query: 362 DDNAPRPGSEQ-LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 + L +++ L ++G+ TL + + + W+++ +P YT+R ++ Sbjct: 359 PPEEEKERKYATLSHLLEELPKQKGKPTLRVGTELLGENWRLRFQRKTPSYTSRWEEIPA 418 Query: 421 VK 422 VK Sbjct: 419 VK 420 >UniRef50_A5FSS1 DNA polymerase IV n=5 Tax=Dehalococcoides RepID=DPO4_DEHSB Length = 390 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 81/399 (20%), Positives = 151/399 (37%), Gaps = 23/399 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+ S E RP+ KPV+V G V A + EA+ G+ G P K Sbjct: 6 VMHVDLDAFFVSVEQAVRPEFKDKPVIVGGKPERRGVVAAASYEARKFGIHSGMPLITAK 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + + N++LY + S + M L + SP +E +DEA+ ++TG + + Sbjct: 66 HLCPQ--AIFIEGNHQLYREYSEKFMLILSDFSPFLEPMGLDEAYLEVTGFESLHGSIAQ 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +IR + + +GIA +K AK+A AK + + ++ Sbjct: 124 MASKIRRRITAELGINASIGIANSKVAAKIATEQAKPNGQCE------VPAGEEASFLAP 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + + GIG++ + L ++GI T+ LA F++ G + Sbjct: 178 LDIAVMPGIGKKTEQHLKSLGIDTLGKLAALPASFLKSCLGTYAPYLSNAAMGIDNRPV- 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E + I +F + + + + + LR + R + I+ + F Sbjct: 237 EMPSEAKSISRETTFETDTRNQTFLEAKLSYLSEKITATLRKRGKQTRVVQIKIRFADFT 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDFFSQGVAQ 357 + L P +R+I A ++ I + + GV + DF Sbjct: 297 ------TLTRQKHLGQPASGNREIFQTALSLMNGILDSDRQAVRLLGVGISDFCGPEKQ- 349 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 + + + E+L +D + K G ++ Sbjct: 350 ---LEIDPAKARLEKLDASLDKIRQKYGFSSVQTGRTYR 385 >UniRef50_UPI0001982DE6 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001982DE6 Length = 1137 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 72/372 (19%), Positives = 134/372 (36%), Gaps = 23/372 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALGVKMGDPWF 56 + D++ F+ S P+L KPV V +N+ + + N A+ GVK G Sbjct: 396 VIIHMDMDCFFVSVVIRNNPELQDKPVAVCHSNNPKGTAEISSANYPARDYGVKAGIFVR 455 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 K L +V F N+E Y +++++ + L + +V+ S DEAF ++ D Sbjct: 456 DAKALCPH--LVIFPYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEVMDS-KEGDP 512 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 IR + + T T GIA +A+LA +AK + +++ + Sbjct: 513 ELLASIIRKEIFETTGCTASAGIAGNLLMARLATRSAKPNGQCY------IPVDKVDDYL 566 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCL 235 LP+ + GIG + +KL + T L +++ F + RG Sbjct: 567 HQLPIKALPGIGHVLEEKLRRRKVHTCGQLRMISKESLQRDFGTKTGDMLWNYCRGVDNR 626 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK-- 293 + + I ++G R D R + + +L+ R + +K Sbjct: 627 VVG-VIQESKSIGAEVNWGVRFNDLKDSRHFLVNLCKEVTLRLKGCGVQGRTFTLKMKKR 685 Query: 294 ------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + + S S+ + T D I AT+ + G+ + Sbjct: 686 RKDAGEPAKYMGCGDCENLSHSMTVPLATDDVDVIQRIATQLFGFFHIDVKDIRGIGLQV 745 Query: 348 GDFFSQGVAQLN 359 + A+ Sbjct: 746 SRLENADTAKQG 757 >UniRef50_Q31B23 DNA-directed DNA polymerase n=7 Tax=Prochlorococcus marinus RepID=Q31B23_PROM9 Length = 428 Score = 295 bits (754), Expect = 2e-78, Method: Composition-based stats. Identities = 151/422 (35%), Positives = 230/422 (54%), Gaps = 6/422 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FYASCE P L KPVV+LSNNDGC+IAR+ EA+AL +KMG P+FK K+ Sbjct: 9 IALIDANNFYASCEQTINPHLRNKPVVILSNNDGCIIARSPEARALKIKMGTPYFKVKEK 68 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + V SSNY LY DMS R+M+ L++ ++EIYSIDEAF ++ N ++L + R Sbjct: 69 LNKLDVAVLSSNYSLYGDMSRRLMNLLKKYCEQIEIYSIDEAFVSISRP-NDKNLYPWAR 127 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 IR+ + Q +T+ VGI + K AK+AN AK + G+ DLS + + + V Sbjct: 128 NIRSLIYQNLGITLTVGIGENKVRAKIANKLAK-NIDYSAGIFDLSRTRNENNYLKRISV 186 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 D++WG+G++ S L + GIK +L D + I K +V +R EL+G CL LE+ Sbjct: 187 DNIWGVGKQTSNWLKSKGIKNARELRDMEENEIIKKLGIVGKRLQLELKGYKCLPLEKSK 246 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 +K+EI SRSFG IT + QA+ ++A +A+EK+RS++ I F +TS ++ Sbjct: 247 KSKKEIQVSRSFGTPITKLEDLTQALATHAIKASEKMRSQNLQSSDIRVFARTSKYSSQN 306 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 KL T D+ I+ I+ +++ KAGV++ D + Q ++ Sbjct: 307 YQRSAHR--KLTNATDDTNSILKIVVELSKEIYNPEYKFSKAGVLMQDLTNSEYLQQSVI 364 Query: 362 DDNAPR--PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 + + + S LM +D LN + + +A Q+ W+M + LS TT + Sbjct: 365 NYKSQKDLKKSATLMRTIDLLNKRFNNNAITWAITKTQKSWKMNKNFLSRSSTTDIEQIP 424 Query: 420 RV 421 + Sbjct: 425 TI 426 >UniRef50_C0YV48 Probable RumB/ImpB like DNA repair protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YV48_9FLAO Length = 423 Score = 295 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 145/411 (35%), Positives = 228/411 (55%), Gaps = 5/411 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M+AL D N F+ SCE PDL G+PVVVLSNNDGCV++R+ EAK LG+ M P FK K+ Sbjct: 1 MYALVDCNNFFVSCERTLDPDLEGRPVVVLSNNDGCVVSRSKEAKDLGIPMAAPAFKYKE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 LF++ V FS+ +ELY S +V++ + E+YSIDE F DLTG D+ ++ Sbjct: 61 LFQKHDVKSFSAKFELYNYKSQQVINIAKSYVLDHEVYSIDELFLDLTGF-KYIDIYEYC 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +I+ + + + V +GIA TKTL K+AN K++ GV L E+ K + L Sbjct: 120 LKIKEEIKDKESIPVSIGIAPTKTLCKVANRIVKEFPENFNGVYILDTPEKIEKALKWLN 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + DVWGIGRR++ K++ G+ DL ++RK + R + EL+G L+L + Sbjct: 180 IGDVWGIGRRLAAKMNDSGVYKAWDLLQKPEMWVRKIMGIHGVRMINELKGIRQLEL-DA 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K+ I +RSF + +T+ +R+ + ++ +E+LR ++ C+ I+ F++T+ F + Sbjct: 239 PSPKKSIAVTRSFMQMLTNKEEVRERVETFGMYCSERLRKQNTCCKMITVFVQTNRFRKD 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y N+ + L PT S I +AI++ G Y++AGVM+ DF + Q++L Sbjct: 299 LPEYKNAMTRILSNPTNSSILIGRVVNELFEAIYREGFHYKRAGVMVNDFVPEDQRQISL 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 F+++ +M MD +N K G+ + + RA LSP Y Sbjct: 359 FEEDIQNQHL-PVMKAMDAMNRKFGKDKVRLGSMSGDNTFG--RAKLSPEY 406 >UniRef50_B9Z6P1 DNA-directed DNA polymerase n=2 Tax=Proteobacteria RepID=B9Z6P1_9NEIS Length = 435 Score = 295 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 176/423 (41%), Positives = 245/423 (57%), Gaps = 7/423 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 FA D N FYA+CE VF P L G+PVVVLSNNDGCV++R+AEAK LGV MG P+F K Sbjct: 16 FAQVDCNNFYAACERVFNPALAGRPVVVLSNNDGCVVSRSAEAKRLGVPMGAPYFTLKGQ 75 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 R GV FSSNY LY D+SNR M L + E+YSIDE F DL+G + R Sbjct: 76 LERQGVAVFSSNYALYGDLSNRAMRLLAGYARAQEVYSIDECFLDLSG---EAEPLRLAR 132 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL--SNLERQRKLMSAL 179 +R +LQ L VG+ +KTLAKLANH AK + GV+DL + + + + Sbjct: 133 RLRDALLQGLGLPACVGLGPSKTLAKLANHLAK-QEAALEGVLDLGSLDATALLQRLEPV 191 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V++VWGIGRR+ ++L GI + LA+T+ ++++ F +V R ELRG CL LE Sbjct: 192 AVEEVWGIGRRLGERLRLAGIGSARQLAETERDWLQRRFGLVTARIADELRGVSCLALES 251 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ ++ +RSFG ++T +++A +A+R AE+LR + F+ I+ S Sbjct: 252 LLEPRRSVMSTRSFGRKVTALAELQEAAAMHASRVAERLRRQGSLAHFLRVGIR-SGVPG 310 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 S +V LL P+ DSR + AA +++ +WQ G RY KAGVM + G Q + Sbjct: 311 WGRGGDASETVALLPPSNDSRVLARAAQQAVARLWQRGVRYHKAGVMAFELVDAGQVQAD 370 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 LF + S +LM MD +N + GRGT+ +G +Q W+MK+ LSP YTTR D+ Sbjct: 371 LFAGDPLDAKSARLMQAMDAINQRMGRGTVRLLAEGTKQPWRMKQDHLSPCYTTRWDDIP 430 Query: 420 RVK 422 VK Sbjct: 431 VVK 433 >UniRef50_A6EED8 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Pedobacter sp. BAL39 RepID=A6EED8_9SPHI Length = 417 Score = 295 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 153/422 (36%), Positives = 224/422 (53%), Gaps = 5/422 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFA D+N Y SCE +FRP+L + VVVLSNNDGCVIAR+ EAKA+G+KM D F ++ Sbjct: 1 MFAHVDINNCYVSCERLFRPELERRVVVVLSNNDGCVIARSNEAKAIGIKMADAEFIVRE 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + V FSSNY LYADMS R+M+ L + + +YSIDEAF L G DL+ Sbjct: 61 RLKESNAVIFSSNYALYADMSARLMNNLARYTYTLMVYSIDEAFMAL-GNIKGIDLSQHA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 I V + T L + VG+ T +LAKLAN AAKK R L E+ ++ P Sbjct: 120 ATISNNVFRDTGLPITVGVGPTLSLAKLANKAAKKQGRNFM---VLDTEEKINAMVQTFP 176 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++DVWGIG KL + I+T D F+RK V R +EL G PC +++ Sbjct: 177 IEDVWGIGMAYYNKLREINIQTAHDFRSLKADFVRKQMTVQGWRLHQELWGIPCNVIKDV 236 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 A + I S+SF T + +A+ +A A KLR + ++ +++T+ + Sbjct: 237 AERSKGIESSQSFNTYQTTLEKVEEAVAMHAGTVALKLRQQKSMALNLTVYLRTNKHNVK 296 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 Y S +VK+ ++ ++L AIWQ G+ Y K GV +G Q NL Sbjct: 297 HDQYYPSLTVKIPFAANSVHELTQVCVQALRAIWQPGYNYLKTGVRATGIIPEGEVQNNL 356 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F++ E + ++D +N + GRGTL +G + W+MK+ LS +YTT ++++ Sbjct: 357 FNEYDNSRKQE-ISKLLDQINDRYGRGTLRLGVEGFDKTWKMKQDYLSRQYTTNWAEIIV 415 Query: 421 VK 422 + Sbjct: 416 TR 417 >UniRef50_Q0AWD6 DNA-directed DNA polymerase n=7 Tax=Bacteria RepID=Q0AWD6_SYNWW Length = 419 Score = 294 bits (753), Expect = 4e-78, Method: Composition-based stats. Identities = 89/406 (21%), Positives = 161/406 (39%), Gaps = 21/406 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + D+N FYAS E + RP++ K V V + G V+A+N AK G++ G+ ++ Sbjct: 4 VILHSDLNNFYASVECLHRPEIRNKAVAVCGDPAARHGIVLAKNYLAKESGIQTGEVIWQ 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 + +V NY LY S S + +VE + +DEA+ D+TG + Sbjct: 64 AQQKCPE--LVVVPPNYPLYLKFSRLARSIYASYTDQVEAFGLDEAWLDVTGSIHIFGSG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + EIR + ++ VG++ K AKL + K + + + ++ Sbjct: 122 IEMADEIRERIKLELGVSASVGVSYNKIFAKLGSDMKKPDAT------TIISKDNFKQTA 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP D+ +GR +K GI T+ D+A++D ++ E G Sbjct: 176 WPLPASDLLYVGRATCRKFARWGISTIGDIAESDPLVLKARLGKWGEVLWSFANGYDRSP 235 Query: 237 LEEFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + S + + + + I + + A +LR CR + ++ Sbjct: 236 VVAMGEESIIKSVGNSITTPRDLENNEDVLLIIYALSESVAARLREHGFKCRTVHIHVR- 294 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM-LGDFFSQ 353 ++ + KLL P S DI A + + H + GV + Sbjct: 295 -----DKNLFTFGVQGKLLRPGNISNDIAEKAMALFRSHYSWAHPIRSIGVRGCDLIAAD 349 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 QL+LF D R E++ +DTL + G ++ A ++ Sbjct: 350 SHEQLSLFTDEEKRIKQEKIEATLDTLRCRFGHFSVQRAVLLKDRE 395 >UniRef50_Q3AKE9 DNA-directed DNA polymerase n=7 Tax=Bacteria RepID=Q3AKE9_SYNSC Length = 424 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 174/422 (41%), Positives = 233/422 (55%), Gaps = 6/422 (1%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N FYASCE P L G+PVVVLSNNDGC++AR+AEA+ALG++MG P+FK + Sbjct: 6 ALIDGNNFYASCEQSLDPALIGQPVVVLSNNDGCIVARSAEARALGIRMGTPYFKARREL 65 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 R VV SSNY LYADMS R+MS LE +E+YSIDEAF + DL + R+ Sbjct: 66 ERHNVVVRSSNYALYADMSQRMMSLLEAHCEELEVYSIDEAFGRIRRP-RNGDLQGWARQ 124 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +RA Q L + +G+ +K AKLAN AK G+ DL + + + + ++ Sbjct: 125 LRARARQNLGLPIAIGLGASKAQAKLANRLAK-QAPDHAGMFDLGQCDNPDRWLETIAIE 183 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 DVWGIGR+++ GI L D +R VV R RELRG CL LE Sbjct: 184 DVWGIGRQLAHWCRLRGISNARHLRDMPSGELRAKCGVVGLRLQRELRGHACLPLELAPA 243 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 KQE SRSF IT + QAI +Y RAAEKLR + Q ++ + +TSPFA Sbjct: 244 PKQETCVSRSFSRPITSQEELHQAIATYVVRAAEKLRKQRQRAAALTIYTRTSPFA--PG 301 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 +Y +AS +L P+ D+ ++ AA + I++ + KAGV+ S + Q +L Sbjct: 302 FYSQAASTQLDLPSNDTAVLLQAARPLVARIFRPHRQLAKAGVLTQHLQSHNILQTHLMV 361 Query: 363 DN--APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 + E LM +D +N + GRGTL +AG G+Q W M+R LS TTR DL Sbjct: 362 PMSEEQQQKRECLMQTIDRINRRYGRGTLQWAGCGLQPSWLMRREQLSRAATTRLQDLPV 421 Query: 421 VK 422 VK Sbjct: 422 VK 423 >UniRef50_Q18A91 DNA polymerase IV n=46 Tax=Bacteria RepID=DPO4_CLOD6 Length = 365 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 75/373 (20%), Positives = 145/373 (38%), Gaps = 21/373 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E L G+PV+V N G V + EA+ G+ P Sbjct: 7 IIHIDMDAFYASIEQRDNKKLKGRPVIVGGNPQSRGVVATCSYEARKFGIHSAMPSAVAY 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-D 118 + V +++Y +S ++ + VE S+DEA+ D+T + D + + Sbjct: 67 NRCPY--AVFVRPRFDVYKSVSEKIRDIFYRYTDLVEPLSLDEAYLDVTKNKKNIDSSIE 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++I+ + + LT G++ K LAK+A+ K + + E + + Sbjct: 125 IAKQIKKDIFREVGLTSSAGVSYNKFLAKIASDLRKPNG------LTVITEENAQDFLDK 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV+ +G+G+ S L +GIKT DL ++ + F + RG +E Sbjct: 179 LPVNKFFGVGKVTSNTLKNLGIKTGYDLRCLNLFELENIFKKRGYELYKFARGIDDRPVE 238 Query: 239 EFAPTKQEIICSRSFGERIT-DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + + + D R + +L++ ++ + ++ IK F Sbjct: 239 P-NRVRKSVGAETTLSHNLDIDEEETRNILDELCEEVCHRLKNSEKFGKTLTLKIKYEDF 297 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S+ L + DI + L + G + + GV + + + Sbjct: 298 TK------ITRSLSLEHYIDEYNDIRSGVDNLLRNVEVNGKQIRLLGVTISNLSDKKETY 351 Query: 358 LN--LFDDNAPRP 368 + LF+ Sbjct: 352 KDITLFEYMDSIQ 364 >UniRef50_D0WQX0 DNA polymerase IV n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WQX0_9ACTO Length = 445 Score = 294 bits (752), Expect = 4e-78, Method: Composition-based stats. Identities = 90/428 (21%), Positives = 163/428 (38%), Gaps = 38/428 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+ S E + RP+L GKPV V G V A + EA+ GV P + Sbjct: 23 ILHVDMDAFFVSVELLDRPELAGKPVAVGGAERGVVSAASYEAREFGVNSAMPVARALRA 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-DFG 120 ++ Y+++S ++M L +++P VE S+DEAF D+ G R Sbjct: 83 CPHLTMI--PPRPGRYSEVSRQIMDILHDVTPLVEKLSVDEAFLDVGGARRLMGGPVRIA 140 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++RA + + + VGIA TK +AK+A+ AK + L + LP Sbjct: 141 TDLRARIRREVGVPASVGIAATKHVAKIASAHAKPDG------LLLIPRSATIAFLHGLP 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEE 239 V +WG+G + +L GI+TV +LAD + + R G+ ++ Sbjct: 195 VGALWGVGEKTRARLANQGIETVGELADAGPERLARILGRAHGTHLYRLAMGQDPRPVQT 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ I +F E + D + + + + A A +LR H R ++ ++ + F Sbjct: 255 S-REEKSIGKEETFFEHVADRGKLERILLAQAHATARRLRRAHLTARTVAIKVRFADFT- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S PT + D+ A D++ +G + G+ Q Sbjct: 313 -----TITRSTTFARPTDLAADLYAGAKHLFDSVAVSGEGLRLLGLRAEQIVDQREGVQL 367 Query: 360 LFDDNAPRPGS--------------------EQLMTVMDTLNAKEGRGTLYFAGQ-GIQQ 398 ++ E+ +D + + G G + Sbjct: 368 ALGADSDDEAWAFGDQAGEGMRQAFGVNPRLERAEAALDRIRDRFGPSFAGPGSLIGADK 427 Query: 399 QWQMKRAM 406 + + + Sbjct: 428 ERRPEADR 435 >UniRef50_A5GPY7 Bacterial UmuC protein homolog (SOS-regulated protein) n=14 Tax=Cyanobacteria RepID=A5GPY7_SYNR3 Length = 426 Score = 294 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 174/421 (41%), Positives = 248/421 (58%), Gaps = 6/421 (1%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N FYASCE +F P L G+PVVVLSNNDGC++AR+ EA+ LG+ MG P+F+ D Sbjct: 6 ALIDCNNFYASCEQLFDPALQGRPVVVLSNNDGCIVARSREARQLGIAMGTPYFQVADRL 65 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 R VV SSNY LY DMS RVM+ L++ P +E+YSIDEAF L + +L+ + E Sbjct: 66 RDQQVVVRSSNYALYGDMSQRVMALLKQRVPELEVYSIDEAFARLPALPA-HELSSWAAE 124 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +R V Q+ L + +G+A +K LAKLAN AK+ GV +L + ++ + V+ Sbjct: 125 LRVLVRQQLGLPIALGMAPSKVLAKLANRLAKRDP-ARTGVCNLLLEPQLPDRLAEVAVE 183 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 D+WG+GRR+++ G+ T LDLA D IR+ + VV R +ELRG CL LE Sbjct: 184 DLWGVGRRLARWCRLRGLATALDLAQADSALIRQGWGVVGLRLQQELRGISCLALESEPA 243 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 KQE SRSFG + D S+R+A+ ++ R AEKLR + Q ++ F++TSPFA Sbjct: 244 AKQETCVSRSFGTAVLDRLSLREAVAAHVVRGAEKLRRQGQRASRLTVFVRTSPFAA--G 301 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF- 361 +Y NS SV L T D+ ++ A +D +++ G+ +QKAGV+LG Q Q +L Sbjct: 302 FYANSISVSLPLATADTAVLLQRALPLVDQLFRHGYAFQKAGVLLGQLQPQEHLQHHLLV 361 Query: 362 -DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 +L+ +D LN + G GT+ +A G++ W M+R LS +TT +DL Sbjct: 362 PCSPQQLRRRSRLLQAVDGLNQRFGTGTVQWAAVGVEPDWCMRRQHLSAHFTTSKADLPM 421 Query: 421 V 421 V Sbjct: 422 V 422 >UniRef50_C9RDA6 DNA-directed DNA polymerase n=1 Tax=Ammonifex degensii KC4 RepID=C9RDA6_AMMDK Length = 385 Score = 293 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 86/398 (21%), Positives = 156/398 (39%), Gaps = 25/398 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 LCD++AF+A+ E P+L GKPV+V + G V + EA++ GV+ P K Sbjct: 4 ILLCDLDAFFAAVEQRDHPELRGKPVIVGGSLTGRGVVATCSYEARSFGVRSAMPLKKAL 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L + + N Y +++ V++ +P +E+ SIDEA+ + + Sbjct: 64 RLCPQ--AILLPVNISRYREVAAEVLAIYRRFTPFIEVVSIDEAYLGVPS----GEGLAV 117 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R I+ V + L + +G++ K LAK+A AK + E +++ L Sbjct: 118 ARAIKEAVRKELDLPLSIGVSVNKLLAKVACDLAKPQGLKA------LWPEEVPQVLWPL 171 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + GIG + ++L A GIKTV DLA + ++ R G L Sbjct: 172 PVGVLPGIGPKTERQLQAKGIKTVGDLAAAPLYLLKMLLGSEALRFKEYSHGVDRRGLVL 231 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P +F + + + +R A+ A +LR R ++ ++ + F Sbjct: 232 SRPPL-SFSKETTFPQDVQEPEVVRGALMRLAEDLGYRLRQNGYLARSVTLKLRFADFR- 289 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + L T I A + ++ G+ + + + Sbjct: 290 -----TVTRTRCLAEGTNRDSLIYRTAWELFQKFASSP-PWRLVGIKVAELSNWKQLS-- 341 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 + ++ L V+D L ++ GR + A Sbjct: 342 -WLEDEQEERERMLALVLDALRSRYGRPVVRRASGLKG 378 >UniRef50_A5FU54 UMUC domain protein DNA-repair protein n=2 Tax=Acetobacteraceae RepID=A5FU54_ACICJ Length = 418 Score = 292 bits (748), Expect = 1e-77, Method: Composition-based stats. Identities = 188/420 (44%), Positives = 235/420 (55%), Gaps = 8/420 (1%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F L D N+FY S E F P+L +P+VVLSNNDGC IAR EAKALG+KMG+PW + Sbjct: 4 FGLIDGNSFYCSAEQAFAPELRSRPLVVLSNNDGCAIARTPEAKALGIKMGEPWHLFRKR 63 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 V SSNY LY DMS RV L E P+VE YSIDE F DL G+ DL F R Sbjct: 64 PESRAVEWRSSNYALYGDMSRRVYDVLTERVPQVEPYSIDEMFLDLDGIP---DLDRFCR 120 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 ++R V Q + VGI TKT+AKLAN AKK + GGV DL + E + + LP+ Sbjct: 121 DLRRDVRQIAKIPTCVGIGPTKTIAKLANKIAKK-ETALGGVCDLRDPELRARHYERLPI 179 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +VWGIG ++ KL A GI T+ D D R +R V R ELRG CL L A Sbjct: 180 AEVWGIGGQVGAKLAAAGITTIADFVRADPRAVRDMLTVTGARVQTELRGASCLPLSLMA 239 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 PT++ I SRSFG I +R+AIC++AARAAEKLR+E I+ F T+P + Sbjct: 240 PTRKGIAVSRSFGHMIDRPAELREAICTFAARAAEKLRAEGLEAGQITVFTHTNPHNGD- 298 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 P+Y K+ PT D+ +I A R L A+W G+RY KAGVML D + LF Sbjct: 299 PWYSAQRQGKI-EPTADTGLLIGEAIRLLRAVWHPGYRYFKAGVMLQDLAPARRQAV-LF 356 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 S M MD +NA+ GRGTL A W +R LSPRYTT++ ++L Sbjct: 357 ASFDRDQ-SAAAMKAMDAINARFGRGTLRIASTATSPSWGARRQNLSPRYTTQAGEMLVA 415 >UniRef50_Q97MB3 DNA polymerase IV n=1 Tax=Clostridium acetobutylicum RepID=DPO4_CLOAB Length = 396 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 91/408 (22%), Positives = 172/408 (42%), Gaps = 25/408 (6%) Query: 1 MFALCDVNAFYAS---CETVFRPD---LWGKPVVVLS---NNDGCVIARNAEAKALGVKM 51 + DVN+ + S E + + + P V+ + G V+A++ AK G+ Sbjct: 4 VIFHVDVNSAFLSWTAVEKLKNGEDIDIRKVPSVIGGDEKSRHGVVLAKSTPAKKYGIVT 63 Query: 52 GDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR 111 G+ + + ++ F ++ Y S +M+ L+ +P +E YSIDE F D+T Sbjct: 64 GESLYHARKKCP--NILVFPPRFDTYRKASESMMNLLKRFTPHIEKYSIDECFMDVTNDL 121 Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + +F I+ + TV VGI+ + LAK+A+ K + T Sbjct: 122 RGMESVEFASIIKERIKNELGFTVNVGISTNRLLAKMASELNKPDKINT------LYKHE 175 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + M LPV +++ +G+ + +KL+ + IKT+ +LA D+ ++ F G Sbjct: 176 IKDKMWPLPVGELFMVGKSMKRKLNELHIKTIGELAKYDVNILKAKFKSHGNMVWEYANG 235 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + + + I + +TD + + + + ++LR ++YC IS Sbjct: 236 IDNSDISRYRDEIKCISNETTLSMDLTDTEKIHKILVTLCENLGQRLRDANKYCTSISVN 295 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 I+TS F S KL +RDII A + + +W + GV L Sbjct: 296 IRTSDFR------NYSHQKKLKNAVSSTRDIILYADKIFNEMWGR-EPIRLLGVQLSGLC 348 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 S Q+++FD+ +E L +D++ K G + + +++ Sbjct: 349 SGSSVQISMFDEKTDT-RNEILDKTLDSIRKKYGDNVIMRSVLLEKEE 395 >UniRef50_C0ZFX0 DNA polymerase IV n=6 Tax=Bacillales RepID=C0ZFX0_BREBN Length = 413 Score = 292 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 101/412 (24%), Positives = 167/412 (40%), Gaps = 17/412 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + L D+ +FYAS E P+L KP+VV + G V+A AK+ GV + ++ Sbjct: 8 IVFLIDMQSFYASIEKGANPELRNKPIVVAGDPERRSGVVLAACPIAKSYGVVAAEALWQ 67 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DL 116 + R+ +V E+Y +S ++ E + +VE YSIDE F D+TG + D Sbjct: 68 AQQKCRQ--LVVVRPRMEMYIRISMQITRIFEAFTDKVEPYSIDEQFLDVTGSVHLFGDP 125 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +IR V T + VGI + K LAK+A K + V E + Sbjct: 126 LQMAAQIRQRVWMETGINCRVGIGENKVLAKMACDNFAK---KREEGVFWLKRETLADTL 182 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP++ ++G+G R+ + MG+ + LAD + +H+ V E R G Sbjct: 183 WKLPIEKLFGVGSRMKRHFHRMGVYQIGQLADMRPAILTRHWGVNGEVLWRTAHGIDDSP 242 Query: 237 LE-EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + +++ I + ++ + + R + +S + + Sbjct: 243 VALDSYDSQKGIGHHMTLPRDYHTASEIKVVLLELCEEVCRRARKKELMGSVLSVGCRGA 302 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 A G +KL T D+ + AA D WQ + GV LG V Sbjct: 303 DLAAGT---GFGRQMKLTEQTNDAMTLYEAACFLFDRHWQET-PVRSIGVNLGQLVPDNV 358 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 QLNLF DN L MD + ++ G+ + A ++ +RA Sbjct: 359 VQLNLFTDN---HKRRSLAQAMDDIRSRYGQDAILRAASVLEAGQAKERARK 407 >UniRef50_A9KLV9 DNA-directed DNA polymerase n=8 Tax=Clostridiales RepID=A9KLV9_CLOPH Length = 432 Score = 290 bits (743), Expect = 5e-77, Method: Composition-based stats. Identities = 98/413 (23%), Positives = 160/413 (38%), Gaps = 26/413 (6%) Query: 1 MFALCDVNAFYASCETVFRP-------DLWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 +F DVN+ + S E +R DL P V+ N G V+A++ AK L + Sbjct: 18 IFFHIDVNSAFLSWEAAYRLHVLGESVDLREIPSVIGGDKENRHGIVLAKSTSAKKLKIH 77 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+ +V NY+ Y S +M L SP+VE YSIDEAF D++G Sbjct: 78 TGEALGAAVQKCP--NLVIIPPNYQRYVKASKSLMEILHRFSPKVEQYSIDEAFVDMSGS 135 Query: 111 RNCRDLTDF-GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 ++ + + TV +G++ K LAK+A K T Sbjct: 136 ELLYGGPVIVANNLKDLIEEELKFTVNIGVSSNKLLAKMAGELKKPNLVHTMF------P 189 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 E K M LPV +++ +GR KKL +GIKT+ +LA TD++ ++ HF E + Sbjct: 190 EEIPKKMWPLPVGELFFVGRATEKKLFNLGIKTIGELAQTDVKILKAHFGKYGEVLYQFS 249 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G L + S + I + S + +LR + + +S Sbjct: 250 HGIDESPLFVPLEANKGYGNSVTTPYDIVTMEHANLVLLSLSETVCTRLRMDGVKGQCVS 309 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 + T F S L + + + ++ A R +W ++ GV Sbjct: 310 VSVTTDTFQ------RASHQGMLFSASNTTMEVYRFACRLFKNLWDGRTPIRQMGVHTSR 363 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 + Q NLFD +L +D++ + G ++ A + M Sbjct: 364 ITKESTMQYNLFD-WDRYEKLSKLDETIDSIRKRYGDDSVMRACFLNTSTYHM 415 >UniRef50_Q3B3L9 DNA-directed DNA polymerase n=2 Tax=Chlorobium/Pelodictyon group RepID=Q3B3L9_PELLD Length = 432 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 189/422 (44%), Positives = 254/422 (60%), Gaps = 4/422 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FY SCE VF P L G+PVVVLSNNDGCVIAR+ E+KALG+ MG P F+ +D Sbjct: 1 MFALADCNNFYVSCERVFNPMLCGRPVVVLSNNDGCVIARSEESKALGIAMGTPLFRCRD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + R GV FSSNY LY DMS+RVM+TL ++P E YSIDEAF DL+G R L + Sbjct: 61 VIGRHGVAVFSSNYPLYGDMSSRVMNTLGAMAPEQERYSIDEAFFDLSGFRR-FGLREHA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +R TVL+ T + V +GIA TKTLAKLA AAKK GGV+ L +R R+ +++ Sbjct: 120 ALMRRTVLKHTGIPVSIGIAHTKTLAKLAAKAAKKDPSC-GGVLMLEGADRVRRALASTH 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++DVWGIGR+ S KL GI+T D A +R+ V + EL+G CL LE Sbjct: 179 LEDVWGIGRQWSLKLALQGIQTAADFAGMPPALVRRLLGVTGAKVQAELQGHRCLPLELV 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P KQ I SRSFG + +++A+ S+A+RAA KLR E ++ FI TSPFA + Sbjct: 239 RPMKQTICTSRSFGRNVFSVEELQEAVASFASRAASKLRREGSTASLLTVFISTSPFAAS 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN- 359 S +V L D+ ++ AA+R L+AI+Q GH Y+KAGV+LG + + Sbjct: 299 ALRREASRTVSLPRAADDAMTLVTAASRVLEAIYQGGHPYRKAGVLLGAIAPKNPPGESF 358 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLL 419 L + +E L VM+ +N + G G++ A + + W+ +SPRYTT ++L Sbjct: 359 LLFGDEGEGRAEALQQVMEQVNLRYGNGSIRLAAE-DSRAWEPLCRHISPRYTTSWEEIL 417 Query: 420 RV 421 RV Sbjct: 418 RV 419 >UniRef50_B8G1R4 DNA-directed DNA polymerase n=2 Tax=Desulfitobacterium hafniense RepID=B8G1R4_DESHD Length = 423 Score = 290 bits (742), Expect = 6e-77, Method: Composition-based stats. Identities = 101/420 (24%), Positives = 167/420 (39%), Gaps = 28/420 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFKQ 58 L D N++YASC P+L GKP++V + G ++ + EA+ GVK P F+ Sbjct: 16 IVLFDANSYYASCHQAVNPELQGKPLLVAGDPRNRTGIILTASYEARFYGVKTAMPLFQA 75 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRD- 115 L V S ++ LY D+S ++ +E + +E+ S+DE F D G Sbjct: 76 LKLCPE--AVVLSPDFRLYLDLSRKMWEIVERYTDEDHIEVVSVDECFADFRGSHLLFGS 133 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK--KWQRQTGGVVDLSNLERQR 173 + R ++ +L+ L V VG++ K AKLA+ + K + + + Sbjct: 134 TEEIARRVQKEILEELGLGVSVGVSYCKIFAKLASDYQRDPKTRVKLPRSFTVIAPGELE 193 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + L V ++ GIGR+ K+L +GI+T+ DLA + +RK F V + G Sbjct: 194 SKVWPLGVGELSGIGRQTEKQLADLGIRTIGDLAQASPQALRKGFGVYGAKLYAWANGRD 253 Query: 234 CLQLEEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + K I S + + ITD + + A K+R E + ++ + Sbjct: 254 ERPVTPEDQAKDHSIGRSITLPQDITDPEQGTEVLLFLADSVGRKVRREETKAQTLTVQV 313 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 K + F + S L PT + I + + L W G + G+ Sbjct: 314 KDAEFK------TRTYSTTLFEPTDSTDVIYRESLKLLAK-WPQGKPIRLLGLTASRLQK 366 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ-------GIQQQWQMKRA 405 L+LF +L +D L K G G L Q + + KR Sbjct: 367 GIEQ-LSLF--QEESEEQTELDRTVDELRDKYGSGILMRGTQYLSLSRKLAGRSTKDKRE 423 >UniRef50_A0M5X6 DNA polymerase IV n=19 Tax=Bacteroidetes RepID=A0M5X6_GRAFK Length = 406 Score = 290 bits (742), Expect = 7e-77, Method: Composition-based stats. Identities = 84/395 (21%), Positives = 158/395 (40%), Gaps = 21/395 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++ F+ S E P+L KPV+V + G V A + E + GV G P + Sbjct: 7 IIHLDLDTFFVSAERREHPELNKKPVIVGGLGDRGVVAACSYETRNFGVHSGMPMKVARQ 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L V+ N +Y S+ V + P E S+DE + DLTG+ + F Sbjct: 67 LCPAATVI--KGNASIYTKFSHEVTEVIRSKVPSFEKASVDEFYADLTGMDRFFGINQFA 124 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +E++ ++L+ T L + G++Q K ++K+A K + ++ + + ++ ++ LP Sbjct: 125 KELQQSILKETRLPISFGLSQNKIVSKIATGEGKPYAQK------IIDPGTEKNFLAPLP 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ + +G + +KL +GI+ + + + + + G + F Sbjct: 179 VNKIPMVGNKTFQKLLNLGIRRIETIQKMPVEVLESVLGKNGRTIWKRAHGIDNPPIIPF 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ I R+F D + + + A A +LR ++ +S I+ S F Sbjct: 239 H-ERKSISTERTFNRDTIDMVRLHATLVAMAESLAYQLRRGNKLTSNVSVRIRYSDFQ-- 295 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 S K+ + D +I ++ + GV G Q+NL Sbjct: 296 ----TYSKQAKISYTSAD-HILIPKVEELFKQLYSRRMLIRLIGVRFSGLV-GGHYQINL 349 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 FDD+ L MD + + G ++ A Sbjct: 350 FDDSEEML---SLYNSMDKIKKRFGEHSVMRAVSM 381 >UniRef50_D1VXB9 Putative DNA polymerase V subunit UmuC n=1 Tax=Prevotella timonensis CRIS 5C-B1 RepID=D1VXB9_9BACT Length = 440 Score = 290 bits (742), Expect = 7e-77, Method: Composition-based stats. Identities = 167/432 (38%), Positives = 249/432 (57%), Gaps = 14/432 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 +A+CD ++ Y SCE VFRPDL KPVVVLSNNDGCV+AR+ EAK +G+ G P+++ K+ Sbjct: 12 YAICDCDSCYVSCERVFRPDLKHKPVVVLSNNDGCVVARSKEAKRMGIPAGMPYYQLKEQ 71 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + + FSSNYELY +++ RVM + E SP+ YSIDE FC L + + DL +G Sbjct: 72 YHDNEIAVFSSNYELYGELTARVMQLIREASPQSVRYSIDECFCVLPDM-SFTDLKQWGE 130 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 + +L+ T + + +GIA TKTLAK+A+H AKK++ + E++ K + P+ Sbjct: 131 SLCHRILKYTGMPISIGIAHTKTLAKMASHYAKKYEGYQHC-CIIDTDEKRTKALQQYPI 189 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +VWGIGRR + KL++MGI++ D A D +IR F VV RT +EL GE C+ ++E Sbjct: 190 SEVWGIGRRHATKLESMGIRSAYDFAMHDKSWIRSLFTVVGMRTWQELWGEDCVPIDEMT 249 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 K+ I SRSF + +Y ++R I ++AAR A KLR + +S F+ T+ F + Sbjct: 250 H-KKSICTSRSFTGMLAEYDAVRTHIANFAARCAYKLRQQQSVASVVSVFVHTNRFREDL 308 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN-L 360 Y NS SV+LLTP+ ++ I+ AA + L I+ +G++Y+KAGV++ S Q N L Sbjct: 309 DQYWNSTSVQLLTPSNSTQVIVQAAAQGLQHIFASGYQYKKAGVVVMGLQSDAAIQTNFL 368 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ----------QWQMKRAMLSPR 410 +L V+D LN G T+ Q +Q ++ S Sbjct: 369 DFHATQMEKHIKLDQVVDRLNKLMGTETVKLGAQQYKQKQQNGKAIVFADAIQHVFKSKN 428 Query: 411 YTTRSSDLLRVK 422 TTR SD++ +K Sbjct: 429 PTTRWSDIMELK 440 >UniRef50_C4L3M4 DNA-directed DNA polymerase n=1 Tax=Exiguobacterium sp. AT1b RepID=C4L3M4_EXISA Length = 363 Score = 290 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 88/376 (23%), Positives = 152/376 (40%), Gaps = 21/376 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AFYAS E RP+L GKPV+V ++ G V + EA+ GV + Sbjct: 4 LIIHVDMDAFYASVEQRDRPNLRGKPVIVGGPPHSRGVVATCSYEARKYGVHSAMSSRRA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLT 117 L V ++ Y +S +VM + ++P VE S+DEA+ D+T Sbjct: 64 FALCPHATFV--KPRFQAYRQVSAQVMEIFKSVTPLVEPLSLDEAYLDVTENSLLSTSGP 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 R I + +RT LT G+A +K +AK+A+ K + + L+ ++ Sbjct: 122 FIARYILGEIKRRTGLTASAGVAPSKFVAKIASGFEKPNG------LTVVPLDEVATFLA 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 L ++ + G+G+ ++ L G T+ DL T ++ F ++ G Sbjct: 176 PLSIEAMHGVGKVTAQTLYKSGYHTIGDLQQTRPEQLKGIFGHDRGQQLYELAHGRDTRP 235 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + ++ I +F I D + + + +L C+ ++ IKTS Sbjct: 236 VV-AMRERKSIGSETTFAFDIDDPEEVFERVIPEMEDVLRQLDRRDLSCQTVTIKIKTSE 294 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F S +KL PT D +I A R D + + G+ + D + + Sbjct: 295 FQAR------SHQIKLNHPTHDHDEIRRLARRLFDEMNVT-EPVRLIGLTVSDLIPRTES 347 Query: 357 QLNL-FDDNAPRPGSE 371 L FD+ E Sbjct: 348 TRQLTFDELTKPSLEE 363 >UniRef50_Q4L7K8 DNA polymerase IV n=65 Tax=Staphylococcaceae RepID=DPO4_STAHJ Length = 358 Score = 290 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 78/368 (21%), Positives = 141/368 (38%), Gaps = 18/368 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+A E P L GKPV+V + G V + EA+ GV P + Sbjct: 6 IIHIDMDYFFAQVEMRDNPTLKGKPVIVGGKASTRGVVSTASYEARKYGVHSAMPMSQAH 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 L V + ++ Y + S +MS + + VE S+DEA+ D+T + + Sbjct: 66 KLCPNGYYV--RARFDAYREASAVIMSIFKSYTDIVEPMSLDEAYLDITHLVRPDLSASK 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 IR + ++T LT G++ K LAKLA+ K + + + ++ Sbjct: 124 IATFIRRDIFEQTGLTSSAGVSYNKFLAKLASGMNKPNGMK------VIDYNNVNDILMN 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + D G+G+ K + I T DL D + + F + RG +++ Sbjct: 178 LDIGDFPGVGKASKKVMHNHDIYTGKDLYDKTEFELIRWFGKRGRGLYLKARGIDHSEVK 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F + D + Q I + + AE+L + ++ +KT + Sbjct: 238 -ATRVRKSVGTERTFSTDVNDDEEILQKIWELSGKTAERLSKLQKSGSTVTVKLKTYQYE 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 S L DI N A + + + GV +G+ + Sbjct: 297 ------TFSKQRSLREAVSRDIDIYNVAYDLYNDLKDPDVPIRLIGVTVGNLEQSRYENM 350 Query: 359 NLFDDNAP 366 ++D Sbjct: 351 TIYDFIER 358 >UniRef50_Q67QM6 DNA polymerase IV n=1 Tax=Symbiobacterium thermophilum RepID=DPO4_SYMTH Length = 361 Score = 290 bits (741), Expect = 8e-77, Method: Composition-based stats. Identities = 101/363 (27%), Positives = 159/363 (43%), Gaps = 19/363 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+AS E P L GKPV+V + G V + EA+ GV+ P + Sbjct: 7 VIHLDMDAFFASIEQRDNPRLRGKPVIVGGSPNSRGVVSTCSYEARRFGVRSAMPSREAL 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L + V N+ YA + +V + + + +E SIDEAF D++G +D Sbjct: 67 RLCPQ--AVFIRPNHAKYAAVGRQVRAIMRRFTDVIEPLSIDEAFLDVSG----QDAVRV 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 RE++ + HLT G++ K LAKLA+ K + + ER ++L+ L Sbjct: 121 ARELKEAIRAELHLTGSAGVSYCKFLAKLASDMQKPDG------LTVITWERAQELLPTL 174 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G + L A+GI T DL D +RKHF + + RG + Sbjct: 175 PVRKLWGVGPASEQALHALGIYTCGDLLAYDPDTLRKHFGKRADELILLARGIDPRPVVP 234 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + I +F TD + + + YA AE+LR + Y R ++ IK + F Sbjct: 235 Y-REAKSIGEENTFPVDQTDREYLSRLLERYADNLAEELRRQGLYARTVTVKIKWNVFVE 293 Query: 300 NEPYYG----NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 P G + S L PT D+R I A + G + + G+ + + QG Sbjct: 294 GGPKGGDFLQITRSQTLPMPTNDARTIGRVAREIFARVEWEGRKVRLLGLSVHNLVKQGE 353 Query: 356 AQL 358 Sbjct: 354 QVQ 356 >UniRef50_A9W7Y3 DNA-directed DNA polymerase n=10 Tax=Rhizobiales RepID=A9W7Y3_METEP Length = 478 Score = 290 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 183/426 (42%), Positives = 233/426 (54%), Gaps = 10/426 (2%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N+FY SCE VF L PV+VLSNNDGC IAR EAKALG+KMGDP+FK + L Sbjct: 54 ALIDGNSFYCSCERVFDAKLARVPVIVLSNNDGCAIARTPEAKALGIKMGDPYFKIRGLC 113 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 GV FSSNY LY DMS R+ + + +P VEIYSIDE+F DLT RD R+ Sbjct: 114 EHQGVRVFSSNYTLYGDMSARINAIYRDATPDVEIYSIDESFLDLTAFVR-RDRVALARD 172 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 IRATV T + VGI TKTLAKLANH AK GV DL+ + L V Sbjct: 173 IRATVRAWTGIPTCVGIGPTKTLAKLANHIAKTVPE-LDGVCDLTEPAAYEHWLCRLHVG 231 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 ++WG+GR KL+AMGI TV DL D D R +RK VV ER + ELRG CL L+ Sbjct: 232 ELWGVGRASLPKLEAMGIDTVADLRDIDPRPVRKALTVVGERMIHELRGVSCLGLDLVPA 291 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 ++ +RSF R+T+ + QA+ ++A R EKLR E I+ F TS EP Sbjct: 292 RRKGCAVTRSFSGRVTERAELEQAVAAHAIRLGEKLRREGLGTDHITVFYHTSEHDRGEP 351 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ----AGHRYQKAGVMLGDFFSQGVAQL 358 S V L T D+ +I AA + W+ RY KAGV+ D +Q Sbjct: 352 MRSVSTVVTLPEATNDTLALIPAALHGMARTWREQGNPPWRYSKAGVVTVDLVPLAASQR 411 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI---QQQWQMKRAMLSPRYTTRS 415 L +++LM +D NA+ GRG++ A G+ ++ W K M +PRYTTR+ Sbjct: 412 ALIGRLDR-ERADRLMGALDACNARFGRGSVVPARAGLAQQRRTWTTKFEMRTPRYTTRA 470 Query: 416 SDLLRV 421 +L Sbjct: 471 DELPVA 476 >UniRef50_C5BW73 DNA-directed DNA polymerase n=4 Tax=Actinomycetales RepID=C5BW73_BEUC1 Length = 415 Score = 290 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 101/401 (25%), Positives = 170/401 (42%), Gaps = 18/401 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E + PDL G+PV+V + G V+A EA+A GV P + + L Sbjct: 23 ILHVDMDAFFASVELIRAPDLRGRPVIVGGEHRGVVLAATYEARAFGVHSAMPMTRARAL 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDFG 120 + V ++ Y ++S VM L +++P +E S+DEAF D++G R Sbjct: 83 CPQ--AVVIPPDHARYEEVSRVVMGLLADVTPVLEQVSVDEAFLDVSGARRRLGSPVAIA 140 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR+ + + + VG+A TK LAKLA+ AK + L + +LP Sbjct: 141 TAIRSRIREVAQIPASVGVASTKFLAKLASQTAKPDG------LLLVPEAASVPFLHSLP 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEE 239 V +WG+G R + +L GI++V LA T +++ R + Sbjct: 195 VGALWGVGERTAAQLREWGIESVEQLAHTPPDVLQRRLGRAGGARLYDLAWNRDPRPV-T 253 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 A ++ I +F +TD + + + A R A +LR R ++ ++ S F Sbjct: 254 VARVEKSISSEHTFVTDVTDAAELGRTLLEQAHRCARRLRRGGFLARGVTIKVRMSDFT- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S +L P+ + D+ AA L A+ + GV + + + Sbjct: 313 -----TLTRSRQLDHPSDVAHDVYAAARALLAAVTIPRDGVRLLGVRVDQLTAAAATPVQ 367 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW 400 L D+ P E + MD + + G L A + Sbjct: 368 LALDDDAAPRRE-VEVAMDDVRDRFGADALGAASLLATSAF 407 >UniRef50_B7AQS7 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AQS7_9BACE Length = 413 Score = 290 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 94/419 (22%), Positives = 169/419 (40%), Gaps = 28/419 (6%) Query: 1 MFALCDVNAFYASCETVF-----RPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMG 52 +F DVN+ + S + DL V + G V+A++ A GV+ G Sbjct: 4 VFFHVDVNSAFLSWSALKLLKEGHDDLRLIASCVGGDEKSRHGIVLAKSILAAQAGVRTG 63 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 +P + + G+V ++ Y S +++ ++E +P VE YSIDEAF D+TG++ Sbjct: 64 EPLYMARKKCP--GLVTVKPQFDWYVKNSRAMIAIMQEFTPDVEQYSIDEAFLDMTGMQT 121 Query: 113 CRDLT-DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + ++ + TV +GI+ + LAK+A+ K + T + Sbjct: 122 LMGPPLEAAARLKDRIRDELGFTVNIGISSNRLLAKMASDFEKPDKIHT------LFPDE 175 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 K M LPV ++G+G+ +K L+ MG T+ D+A D + + + G Sbjct: 176 IDKKMWHLPVGSLFGVGKSTAKALNNMGFYTIGDVAAADRGLLVSKLGKMGDMAWNYANG 235 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + + + S + GE ++ I S A A +LR++ + ++ Sbjct: 236 IESVAIVRHEAKENSYGNSVTTGEDVSSIDVALGIIMSLAESVALRLRTDGKKAGVVTVT 295 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + + F + S L PT + I A + L +W+A + G+ G Sbjct: 296 LVDTEFNRH------SHQCSLEYPTNTTDVIYENAQQLLYEMWKADRPVRLIGISAGKAA 349 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPR 410 + Q++LF D ++L MD + K G + A + K LS Sbjct: 350 HEEFEQMSLFAD-ERTDKLKKLDAAMDEIRNKFGEEAVVRARLLGSE----KHERLSKA 403 >UniRef50_D1PGW5 DNA-directed DNA polymerase n=1 Tax=Prevotella copri DSM 18205 RepID=D1PGW5_9BACT Length = 387 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 79/361 (21%), Positives = 151/361 (41%), Gaps = 18/361 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+A+ E P+L GKPV V G V + EA+ GV + K Sbjct: 21 IIHIDMDAFFAAVEQRDNPELRGKPVAVGFDGPRGVVSTASYEARKYGVHSAQSIAQAKQ 80 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDF 119 ++ ++ YA +S+++ +E + +E SIDEAF D+T + D Sbjct: 81 RCP--NLIIVPCRHDYYAKISHQIHQIFQEYTDLIEPISIDEAFLDVTQNKKGIELAVDI 138 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +EI+ + + T LT GI+ K LAK+A+ K T + ++ ++ L Sbjct: 139 AKEIKTRIKEATGLTASAGISYCKFLAKVASDYRKPDGICT------IHPDKAYDFIAQL 192 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P++D WG+G++ +K+ MGI DL + + F RG + Sbjct: 193 PIEDFWGVGKKTLQKMHFMGIFNGADLRKVSEEHLVEVFGKAGHIFYDFARGIDERPVIT 252 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + ++ + C ++F E I ++ + E++ R ++ +K + F Sbjct: 253 Y-RERKSVGCEQTFLEDIYLKTAVIIELYHTVLELLERIAKSGFEGRTLTLKVKFADFTQ 311 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI-WQAGHRYQKAGVMLGDFFSQGVAQL 358 + S+ + DI+ A R L + + + H + G+ + + S+ + Sbjct: 312 ------ITRSISQEKVLKKKDDILPLAKRLLKQVDYSSAHPIRLLGLSVSNASSEEARKQ 365 Query: 359 N 359 + Sbjct: 366 D 366 >UniRef50_A7REV5 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7REV5_NEMVE Length = 870 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 86/413 (20%), Positives = 146/413 (35%), Gaps = 57/413 (13%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------ 36 + D++ F+ S P+L GKPV V N G Sbjct: 285 VIMHIDMDCFFVSVYVRDHPELDGKPVAVSRFNGGGGCELKSSHIVNYEMSFPTGFVADL 344 Query: 37 ---------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 + + + A+ GV+ G + + L V ++ Y +S Sbjct: 345 TSPDKSSAFFNSMSEIASCSYAARECGVRNGMFLGQARKLCPDITCV--PYLFDKYRQVS 402 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIA 140 R+ L S +E S DEAF D+T + + ++IRA + T GI+ Sbjct: 403 QRLYEILVSYSHDIEAVSCDEAFLDVTHSLDAGTEPMALAQQIRAEIRAATRCNASAGIS 462 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 LA++ AK + LS + + M++ D+ G+G +SKKL+ MG+ Sbjct: 463 SNVLLARMCTRIAKPDGQFY-----LSREDDVIQFMASQKAKDLPGVGWALSKKLNDMGV 517 Query: 201 KTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 +T DL ++ ++K F R RG L ++ + ++G R T Sbjct: 518 ETCADLQKLSLQALQKEFGPKTGLSLHRSCRGVDDRPL-RVERERKSVSAEINYGIRFTQ 576 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK--------TSPFALNEPYYGNSASVK 311 + I A ++LR R I+ +K F + S S Sbjct: 577 DYEGVKFIEELAGEVHKRLREVGLKGRCITLKLKVRQEGAPMPRKFMGHGICDNVSRSAT 636 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 L+ PT D+ I L + H ++ G+ + + LFD Sbjct: 637 LVEPTDDNSVIARECLNLLKTLNIPAHDFRGLGIQVSKLTNSSAGSKTLFDFM 689 >UniRef50_Q2RYM0 UmuC protein n=2 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYM0_SALRD Length = 432 Score = 289 bits (740), Expect = 1e-76, Method: Composition-based stats. Identities = 166/430 (38%), Positives = 225/430 (52%), Gaps = 13/430 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D FY SCE VF P L G+PV VLSNNDGCVIAR+ E K GV MG P FK ++ Sbjct: 4 VFALIDCENFYVSCERVFDPSLRGRPVAVLSNNDGCVIARSEEVKEAGVPMGAPLFKWRE 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 SSNY LY DMS RV S +EE + +E YSIDEAF G+ +L+ Sbjct: 64 ELDEIEAEILSSNYTLYGDMSRRVHSIIEEEALALERYSIDEAFARFPGLSRD-NLSRVA 122 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER--QRKLMSA 178 +R + + + V VG+ TKTLAK+A+ K +R G + + +L+ Sbjct: 123 DRLRRRIRRHIGIPVRVGVGPTKTLAKVADLNGKARKRAGWGQGTYVCPDEPKREELLKR 182 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + V D+WGIG K L G+ + +IR VV RT ELRG CL LE Sbjct: 183 VSVGDIWGIGSAYEKTLQEKGVASAAGFRALPGPWIRSEMTVVGLRTAWELRGRSCLDLE 242 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 P ++ ++ SRSFGER+ ++R+A+ +A RAAEKLR E + I FI T F Sbjct: 243 LVRPDRKTMVRSRSFGERVETKANLREALAKHAQRAAEKLREEGLVAKGIKVFITTKRF- 301 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + P+Y N + L T + A+ R L+ I+++GH Y+KAGV L D Q Sbjct: 302 GDPPHYSNGVAGALPEHTARASAFAKASRRLLEPIYRSGHGYKKAGVCLYDIRPSRPHQE 361 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG-------IQQQWQMKRAMLSPRY 411 +LF R E LM +D +N K G+G + A G ++++W MKR SP Y Sbjct: 362 SLFG--QGRKEDEDLMEAVDQINRKHGKGAIGLAAAGLPEGKGHLEREWTMKRQRRSPLY 419 Query: 412 TTRSSDLLRV 421 TTR +L Sbjct: 420 TTRWDELPVA 429 >UniRef50_B8DRU5 DNA-directed DNA polymerase n=13 Tax=Proteobacteria RepID=B8DRU5_DESVM Length = 497 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 178/435 (40%), Positives = 238/435 (54%), Gaps = 17/435 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 +AL D N FYASCE +FRPDL GKP+VVLSNNDGC+I+R+ EAKALGV+MG P FK + Sbjct: 62 WALVDCNNFYASCERLFRPDLRGKPIVVLSNNDGCIISRSDEAKALGVEMGAPAFKVRRE 121 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 R GV FSSNY LY D+S+RVM TL LSP V++YSIDEAF L G D GR Sbjct: 122 LARLGVHVFSSNYALYGDLSSRVMRTLGTLSPEVDVYSIDEAFLPLRGPLA-ADPVAVGR 180 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER-----QRKLM 176 +R V + T + + VGIA T+TLAK+A AK + GV DL+ L+ Sbjct: 181 ALRERVARWTGIPISVGIAPTRTLAKIAGRVAK-RTPRCEGVFDLARSREVLGMSVDDLL 239 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC-- 234 +LPV+ VWG+GRR++ L GI T L D ++R+ +V RTV ELRG PC Sbjct: 240 GSLPVESVWGVGRRLAGMLRGAGIATARALRDAGDDWVRRRMSVTGLRTVLELRGLPCIG 299 Query: 235 -LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + E + ++ SRSF RI D +R+A+ ++AA A KLR ++ ++ Sbjct: 300 AEEQGEPPSPRHTVVSSRSFAGRIADVAMLREALATHAALAGAKLRRAGLVAGGLAVHVR 359 Query: 294 TSPFALNEP-YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 T+ +S ++ L PT DS I A LD +++ G+ Y KAGVML Sbjct: 360 TARHDEQAALRCDDSVALPLPVPTADSAVFIRLAHEGLDRVFRPGYPYAKAGVMLYGLER 419 Query: 353 QGVAQLNLF----DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRAM 406 Q +L E+LM V D +NA+ GRG L A +G+ W M++ Sbjct: 420 ADTRQGSLLALADGTAERDAARERLMAVADRINARYGRGKLRHAAEGLDAEAPWHMRQKH 479 Query: 407 LSPRYTTRSSDLLRV 421 SPR TT +L Sbjct: 480 RSPRRTTAWDELAEA 494 >UniRef50_D2MQ51 Putative DNA polymerase IV n=1 Tax=Bulleidia extructa W1219 RepID=D2MQ51_9FIRM Length = 395 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 100/407 (24%), Positives = 167/407 (41%), Gaps = 22/407 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVV-LSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 ++ D+NAF+AS E + P L GKP+VV V + EA+A G+ K Sbjct: 4 IYFHVDLNAFFASAEILRDPSLKGKPIVVSGQTKRSVVSTASYEARAYGIHSAMSIILAK 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L ++ +Y Y +S+ M+ + SP +E SIDE + D+T V D Sbjct: 64 KLCPDLEII--EGHYSYYRSLSDEFMTIVRSFSPYMEKASIDECYVDVTDVIQQYKHPLD 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++ + Q+T L +GI LAK+A+ K + + + Sbjct: 122 LAVLLQKAIYQKTGLGCSIGIGPNLFLAKMASDMKKPMGI------TVLRIRDVEAKLWP 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLAD-TDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV + GIGR+ K++A+GIKT+ DLA+ I+ + K F + + + RG L Sbjct: 176 LPVHKMRGIGRKTLPKVEALGIKTIGDLANYQPIQDLGKIFKNSTDSLLEKCRGIDRTPL 235 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E ++ + S + E I+DY +R + S + + +L E + R IS I F Sbjct: 236 -ELDWQRKSLGVSETLLEDISDYEELRGLLRSLSKKLHHQLEKEKRIGRAISIRITYYNF 294 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 S S+ + DI + A + D W+ + G+ + DF + A Sbjct: 295 R------NVSRSLSVKQGIYLEPDIFDLALQLFDQYWEYDEPVRLLGITITDFMDEHQAI 348 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 L + ++D +N L Q + +R Sbjct: 349 QQLNLFEE--EKIDPTQQIIDEINRLTSIPLLKRGNQAKTK--GKRR 391 >UniRef50_C7R3I3 DNA-directed DNA polymerase n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3I3_JONDD Length = 413 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 99/398 (24%), Positives = 171/398 (42%), Gaps = 20/398 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E RP+L G+PV+V V+A + EA+ LGV+ P + + L Sbjct: 23 VMHVDMDAFYASVEIAQRPELRGQPVIVAGGERSVVLAASYEARELGVRSAMPTQRARLL 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFG 120 V + + YA +S VM L+ ++P VE SIDEA+ D++G+R + L+ Sbjct: 83 APH--AVWVAPRHHEYARISRSVMDYLDTITPWVEQVSIDEAYLDVSGIRGPQGTLSARA 140 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +E+RA V +T VG+A K LAKL + AK + + ++++ ++ LP Sbjct: 141 QELRAQVKAHHGVTCSVGVAANKFLAKLCSTQAKPDG------LLVLPRGQEQEFLNLLP 194 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEE 239 + + GIG + ++L G+ T+ D+A + ++ R + RG + Sbjct: 195 IGALMGIGDKSERRLKQHGLHTIRDVAALEPSYVVALLGATLGNRLIHLARGIDDRPVTP 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + +F + +R + S A +LRS R IS I+ F Sbjct: 255 T-RVEKSVGAEHTFAQDEGSREVLRATVRSLADTVTSRLRSRGLLARTISVKIRDVNF-- 311 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + V L +P+Q + + A +D G R + GV + L Sbjct: 312 ----HTITRHVTLHSPSQSLHVVFSQAWTLVDRQLLPGQRARLLGVRAEQLVPEEGQPLT 367 Query: 360 L---FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 L + + +D + AK G + Q Sbjct: 368 LTLEESLTDHHDTTRKTEETIDAIRAKFGSRAISLGVQ 405 >UniRef50_C8P3H3 DNA polymerase IV (Pol IV) n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P3H3_ERYRH Length = 406 Score = 288 bits (737), Expect = 2e-76, Method: Composition-based stats. Identities = 88/407 (21%), Positives = 162/407 (39%), Gaps = 24/407 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFKQ 58 CD++ +A E + P L P+ V G V+ARN AKA GVK + + Sbjct: 6 ILHCDIDYCFAQIEIMKNPSLADVPMCVGGDESKRHGIVLARNPIAKAKGVKTAETLNEA 65 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 + G+V +++ Y +SN+V E + +VE + IDEA+ D++ Sbjct: 66 RRKCP--GLVIVPPSFDDYLTISNQVKDIYREYTDKVESFGIDEAWVDISDSLLLFGKPG 123 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D EIR + LTV +G++ K AKL + K + + + ++ Sbjct: 124 DIATEIRKRIKTEIGLTVSIGMSFNKIFAKLGSDLNKPDG------LTILMESHVKSMIW 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV D+ +G K L+ MGI+T+ DLA D + H + G+ ++ Sbjct: 178 PLPVQDLLYVGPSTQKSLNKMGIRTIGDLACADENQLHTHIGKMGSLLKSFANGDDTSEV 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + + + + +R+ + A + + R+ + + I+ Sbjct: 238 NPHTDPAKSVGNGMTTPQDLVSIEEVRRVLFVLAESVSSRCRNIEKKGSVLRICIR---- 293 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-QGVA 356 N S KL PT I+N + ++ W + + L D S Sbjct: 294 --NNQLETLSRQKKLNQPTNTVDQIVNESLFLIERYWDQKQPLRSITITLSDLVSTTQPI 351 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 QL+LFD++ + +D++ + G + A +Q+ + + Sbjct: 352 QLSLFDESV-----SAIDETIDSIRDRFGHHAIKRANVLLQKNLEKR 393 >UniRef50_A9KNH1 DNA-directed DNA polymerase n=4 Tax=Clostridiales RepID=A9KNH1_CLOPH Length = 400 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 98/410 (23%), Positives = 173/410 (42%), Gaps = 28/410 (6%) Query: 1 MFALCDVNAFYASCETVFR----PD---LWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 + DVN+ + S E+V R P+ L P V + G V+A++ +AK+ G+ Sbjct: 7 LIFHVDVNSAFLSWESVHRLAADPESIDLRTIPSAVGGDKQSRHGIVLAKSTQAKSFGIV 66 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P +V N+E+Y S R+M+ L E +P + +SIDEAF D+T Sbjct: 67 TGEPLTHALQKCPS--LVVVPPNFEVYTRYSERLMNLLSEYTPTLNQFSIDEAFLDMTDT 124 Query: 111 RNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + D +IR VL+ TV +GI+ K LAK+A+ K + Sbjct: 125 YHLFGAPMDIANQIRDRVLKELGFTVNIGISTNKLLAKMASDFKKPNLCHS------LFP 178 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT-VRE 228 + M LPV++++ +G+ K +GI+++ DLA T++ ++ H Sbjct: 179 SEIPEKMWPLPVEELFFVGKSAKAKFGILGIRSIYDLAHTNVNILKTHLGNKYSALIHEY 238 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G +E P + S + + + D +Q + + + +LRS + C I Sbjct: 239 ANGIDEEPVEVTDPKAKGCGNSITLSQDVIDNAIAKQVLLALSETVGARLRSSNVSCSCI 298 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + IK + F + L T + I AA R D W + G+ Sbjct: 299 TVEIKYTNFQ------TYTHQTVLPHQTNTTATIYEAACRLFDEFWD-NSPIRLLGIRTT 351 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 +Q++LFD+N ++L + +D++ K G ++ A + Sbjct: 352 KLDDTDFSQISLFDNNQSD-KFKKLDSAIDSIRNKYGIDSVKRASFLKKG 400 >UniRef50_Q1QAG3 DNA-directed DNA polymerase n=2 Tax=Psychrobacter RepID=Q1QAG3_PSYCK Length = 371 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 85/362 (23%), Positives = 141/362 (38%), Gaps = 19/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P+L GKP+VV N G V A + E + GV+ ++ + Sbjct: 22 IIHIDMDAFYASVEQRDFPELRGKPLVVGGDPNGRGVVAAASYEVRKFGVRSAMSCYEAR 81 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTD 118 V+ +++Y +S + + L+P VE S+DEA+ D+TG+ + T Sbjct: 82 KRCPE--VIFVPPRFDVYRAVSVEIRRIMHILTPHVEPLSLDEAYLDVTGLSVHQGSATL 139 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +RA +L +T L G++ K LAK+A+ K + +SA Sbjct: 140 MANWLRAQILGQTGLNASAGVSFNKMLAKIASDINKPNGTA------VITPADADAFISA 193 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++ GIG+ +K+L AMG+ DL T + F + G ++ Sbjct: 194 LPIERFHGIGKATAKRLHAMGVSNGADLRRTPAAILVNEFGKRGQFYHDIAHGRDERAVK 253 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + +F E +TD ++ I A A +L + I+ +K S F Sbjct: 254 SERT-HKSVGSETTFRENLTDDNELKIQIYEQNADAFSQLHKKQLIAYTITLKVKYSDFT 312 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S L T + + I + GV S Sbjct: 313 Q------VTRSHTLSTAFDSAESAHFWLDKLFLDI-PRTLPIRLVGVTFSSLTSATQVTP 365 Query: 359 NL 360 L Sbjct: 366 QL 367 >UniRef50_C0D1Q6 Putative uncharacterized protein n=2 Tax=Clostridium RepID=C0D1Q6_9CLOT Length = 435 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 100/411 (24%), Positives = 168/411 (40%), Gaps = 28/411 (6%) Query: 1 MFALCDVNAFYASCETVFRP-------DLWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 + DVN+ + S E+V+R DL P V + G V+A++ AK GV Sbjct: 22 LIFHIDVNSAFLSWESVYRLSADPQALDLRTIPSAVGGDAKSRHGIVLAKSTLAKQYGVT 81 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + + VV S ++ Y S+R+M LE +P E +SIDE F D+T Sbjct: 82 TGEPLAQALRKCPQLTVV--PSRFDYYIKCSHRMMELLETYTPDHEKFSIDEIFLDMTQT 139 Query: 111 RNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + + IR + TV +G+A K LAK+A+ K + T Sbjct: 140 IHLFGQPLEAANRIRERIRDELGFTVNIGVAPNKLLAKMASDFEKPDKCHT------LFA 193 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR-E 228 + LP+ +++ +G +K++ +GI T+ LA D+ ++ H T+R Sbjct: 194 HEIPSKLWPLPIRELFFVGGAAQRKMENLGIHTIGQLASCDLAVLKAHLGEKYAVTIRGY 253 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G + E P + S + ++DY + Q I S +LR++ CR + Sbjct: 254 ANGVDVDPVAEKDPINKCYGNSVTLSRDVSDYETACQVILSLCETVGARLRADRVLCRNV 313 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 +K F + S + L PT + + A R L W + GV G Sbjct: 314 CVELKDWEF------HTQSHQMILPEPTDSTSALYGYACRLLREFWDRT-PVRLIGVRAG 366 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +QL+LFD + + L +D + +K G ++ A + Sbjct: 367 KIDDDSFSQLSLFDSPSN-RKKKDLEKAVDQIRSKFGVDSIKRASFLKEDS 416 >UniRef50_C6WDG0 DNA-directed DNA polymerase n=8 Tax=Actinomycetales RepID=C6WDG0_ACTMD Length = 430 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 99/401 (24%), Positives = 162/401 (40%), Gaps = 22/401 (5%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E RP+L PVVV + G V + N A+ GV+ P + L Sbjct: 31 LHVDMDAFYASVEIRDRPELARLPVVVGGTAHRGVVASANYLAREFGVRSAMPTAHARRL 90 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DF 119 V ++ Y D+S VM +++P VE S+DEAF D+ G T + Sbjct: 91 APH--AVFLPPDFTKYRDVSRGVMELFRQVTPLVEPLSLDEAFLDVGGALRRLRATPAEI 148 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +R V + +T VG+A TK LAKL++ K + + +R + + L Sbjct: 149 AARVRVDVEREHGITCSVGVASTKFLAKLSSGMCKPDG------LMVVPKDRALEFLHPL 202 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 PV +WG+G+R +++LD +G++TV D+A + +RK V E RG + Sbjct: 203 PVGALWGVGKRTAEQLDRLGLETVGDVAAAPLLRLRKAVGVALAEHLYALARGHDDRPVV 262 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + I +F D ++ + + R A LR++ R +S ++ + F Sbjct: 263 PYTRE-KSIGAEETFEVDHFDRAVLKLELLRLSERTAASLRAKGLRGRTVSIKVRFADFT 321 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S L T +R++ AT LD G + GV + + Sbjct: 322 ------TITRSKTLRVATDVAREVYATATSLLDDHVPPGA-VRLIGVRVEQLSEGAAGEQ 374 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 FD D + G + A Sbjct: 375 LAFDAPERGWREA--EQAADQARTRFGTAAVRPASLLSTAP 413 >UniRef50_C7NIB1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NIB1_KYTSD Length = 407 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 93/407 (22%), Positives = 160/407 (39%), Gaps = 20/407 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS V RP+L G+PV+V + V++ EA+A GV+ P + + L Sbjct: 12 VLHVDMDAFYASVALVDRPELRGQPVIVGGGHRSVVLSATYEARAFGVRSAMPMARARRL 71 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDFG 120 + VV ++E YA +S VM +++ V+ S+DEAF D+TG R Sbjct: 72 CPQATVV--RPDHERYAAVSAAVMEIFRQVTHAVQPTSVDEAFLDVTGTSRRWGSPLQVA 129 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR TV H+T VGI +AK+A+ AK + + L Sbjct: 130 EWIRRTVAAEQHITCSVGIGPNPFVAKVASGQAKPDGTRQ------VTPAEVVSFLHPLD 183 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEE 239 V +WG+G + ++L G+ TV +A T + +++ G ++ Sbjct: 184 VGVLWGVGEKTQEQLARFGLTTVAQVAHTPVVTLQRIVGDHAGAALAERAWGRDPQRVRP 243 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I ++F I D + + + R A + R+ R + ++ + F Sbjct: 244 VVAE-KTIGNGQTFDHDIDDPRQVETRLLLLSDRVAARARTAGVMGRTVQVTVRFADFT- 301 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 S L P+ SR+I A ++ R + V L Sbjct: 302 -----TVQRSRTLQRPSDVSREIHQVAREVFASLGLQRARVRMVRVTLSGLTPTDRTPRQ 356 Query: 360 -LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 + D+ +D +A+ G G + A +++ RA Sbjct: 357 GMLDEPEVGWREA--DAAVDRASARFGAGIVRPASLLPEERGPRGRA 401 >UniRef50_A6NU31 Putative uncharacterized protein n=4 Tax=Bacteria RepID=A6NU31_9BACE Length = 414 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 108/421 (25%), Positives = 170/421 (40%), Gaps = 27/421 (6%) Query: 2 FALCDVNAFYASCETVFRPDLW--GKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWF 56 CD+N+FYAS E + P+L GKPV V + G ++A+N AKA+GVK + + Sbjct: 5 ILHCDLNSFYASVELLSLPELRESGKPVAVCGDPESRHGIILAKNEPAKAMGVKTAETIW 64 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--R 114 + + +V ++ + Y S V + + + VE +SIDE++ D+TG + Sbjct: 65 QARQKCPD--LVLLPAHRDQYRKYSRIVNAIYDRFTDLVEPFSIDESWLDITGSMHLWGG 122 Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 D IR TV T LTV VG++ K AK+ + K + E R+ Sbjct: 123 DGKAIADRIRETVKAETGLTVSVGVSFNKVFAKMGSDYKKPDAT------TVITRENFRQ 176 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 L+ LPV D+ +G +K L G++T+ DLA D + + G Sbjct: 177 LLWPLPVTDLLFVGGAAAKVLRGYGVQTIGDLARFDPQALVTILGKQGAALHSYAAGTEH 236 Query: 235 LQLEEFA--PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + P + + +F + +R + + + A +LR C + I Sbjct: 237 EPVIPARDLPPPKSVGSGLTFRRNLLGLEDVRAGLSALSDEVAARLRRHGLKCTTVQVTI 296 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + F +L PT SRDI +AA L A W + V + Sbjct: 297 RDPNFR------DICRQKRLPAPTYVSRDIADAALELLLASWNLKLPIRALTVTGQNLVD 350 Query: 353 --QGVAQLNLFDDNAPRP--GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 QL+LF NA E+L MD + K G + FA +Q +R Sbjct: 351 EADAGEQLDLFAANAAPHRDKLERLERTMDKIRDKYGGTAITFASAVRGEQGGTQRQDDV 410 Query: 409 P 409 P Sbjct: 411 P 411 >UniRef50_Q73P36 DNA polymerase IV n=2 Tax=Treponema RepID=DPO4_TREDE Length = 395 Score = 287 bits (735), Expect = 4e-76, Method: Composition-based stats. Identities = 85/406 (20%), Positives = 165/406 (40%), Gaps = 19/406 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 +F D++AF+AS E + P+ GKPV+V + G V + EA+ GV P + + Sbjct: 6 VFFHVDIDAFFASVEQLDNPEYMGKPVIVGGQSERGVVSTCSYEARKFGVHSAMPILQAR 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + + Y + S VMS ++ +P ++ S+DEAF ++TG+ + Sbjct: 66 KLCPSG--IFLRGRMDRYHEKSKEVMSIFKDFTPEIKQISVDEAFLNMTGMEKIFGTPKN 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++ T+ + T LTV VG AQ K +AK+A+ +K + + + M + Sbjct: 124 SALLLKKTIKEETGLTVSVGCAQNKYIAKIASGRSKPDG------LFIVKAGEEIDFMKS 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQL 237 LP+ DVWG+G + ++L A G+ +V + ++ ++ + +RGE + Sbjct: 178 LPLKDVWGVGGKTRERLIAAGLTSVPQIFNSSEHLLQSILGNASGSFLFQAVRGEL-YDV 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 I R+F + + + + A+ ++ E + +S I+ + F Sbjct: 237 FSDDVKSHSISTERTFEHDLFSHAEIDDVMFYLASELMYRIFDEKVKGKTVSVKIRYNDF 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 S D++D+ A + + G+ + + S Sbjct: 297 T------TVSVQST-GAVVNDTQDLFERARELFYKKFDNKTPIRLLGLCIMNIESDIPEA 349 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 + ++ M TL KEG+ L A + + ++ Sbjct: 350 QTELFYSEKNVKKRKIEETMYTLTKKEGKNILKPARLLKKDKDGLE 395 >UniRef50_B5EN92 DNA-directed DNA polymerase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EN92_ACIF5 Length = 378 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 85/364 (23%), Positives = 140/364 (38%), Gaps = 22/364 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+A+ E P+L G+PV+V + G V + EA+ G+ + + Sbjct: 15 IIHVDMDAFFAAVEQRDHPELRGQPVIVGGDPAGRGVVATCSYEARRFGIHSAMTAARAR 74 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L + V + Y + S +VM L +P VE S+DEAF D+T Sbjct: 75 SLCPQ--AVFVRPRMDAYREASRQVMGILRCYTPLVEPLSLDEAFLDVTAATADGVLAVR 132 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REIRA + + T LT G++ K LAKLA+ K + + E ++ Sbjct: 133 IAREIRARIERETGLTASAGVSYNKLLAKLASEWRKPNG------LFVVPPEHGLAFLAP 186 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G KKL AMGI TVLDL + + F RG ++ Sbjct: 187 LPVGKLHGVGPATVKKLSAMGIHTVLDLRNASREVLIAQFGKAGLWFYEVARGIDSRPVQ 246 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F + + D M + A + + +L++ R +S + F Sbjct: 247 TS-RQRKSVGYERTFPQNLEDPKVMLSTLRQMAGQVSARLQALGLAGRTVSIKARFPDFE 305 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR----YQKAGVMLGDFFSQG 354 + + + II L A + GV + + Sbjct: 306 ------TVTRAHTDAQAIWRTEAIIACLPGLLAKAIPASLPMHASVRLLGVTVSGLVNVE 359 Query: 355 VAQL 358 Sbjct: 360 AVPP 363 >UniRef50_D1VVF6 DNA polymerase IV n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VVF6_9FIRM Length = 412 Score = 287 bits (734), Expect = 5e-76, Method: Composition-based stats. Identities = 87/405 (21%), Positives = 167/405 (41%), Gaps = 23/405 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFKQ 58 D+N+FY SCE + +P+L +PV V + G ++A+ AK GV G+P ++ Sbjct: 3 ILHVDMNSFYVSCELIDKPNLKSQPVAVGGDEKLRHGIILAKTPMAKKFGVLTGEPIWQA 62 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 K ++ F NYE Y +S + +VE Y +DE F D+TG + Sbjct: 63 KKKCP--NLLIFPPNYEKYIRISKAAQKIYYSYTNQVEPYGMDECFLDITGSKKLFGSPE 120 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 EI+ + +TV VG++ K AKLA+ K E +K++ Sbjct: 121 KIAFEIKERIKTELKVTVSVGLSFNKVFAKLASDMRKPD------YCTFIYKENYKKIVW 174 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V D+ IG + +KKL+ + IKT+ DLA+ D +RK+ + + G ++ Sbjct: 175 PLKVQDMIMIGPQTTKKLNKINIKTLGDLAEADPEILRKNLGINGIKIYNWANGMDNTRV 234 Query: 238 EEFAP--TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 +++ + I S + E + +Y +R I +++L + R ++ + + Sbjct: 235 KDYYQIIPIKSIGRSITCKEDLLNYEEVRAVIQKLCEDISKRLIENNYLARGVNVGYRKN 294 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI--WQAGHRYQKAGVMLGDF-FS 352 + V L P+ + +I A ++ + + + + Sbjct: 295 NLSHESSD------VLLDYPSNSTLEISAKAMDVFLKNFTFKDDEKIRALYIRAIKLIQN 348 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 + Q++LF+D L + + + G+ ++ + Sbjct: 349 REAIQIDLFNDVKKHFKYLSLEKAIYNIRNRYGKNSITYGNLIGD 393 >UniRef50_B9YCM9 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YCM9_9FIRM Length = 409 Score = 287 bits (734), Expect = 6e-76, Method: Composition-based stats. Identities = 97/411 (23%), Positives = 169/411 (41%), Gaps = 22/411 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAF+AS E + P L GKPVVV V + EA+ GV P + Sbjct: 16 VIYHIDLNAFFASAEILLDPSLEGKPVVVSGLTKRSVVSTASYEARQFGVHSAMPINEAL 75 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L + +V ++ Y +S + +S +++ + RVE SIDE + D++ + D Sbjct: 76 KLCPQ--LVVVKGHHGYYEQLSEQFISYVKKYTDRVEQASIDECYADMSQAIHRFPRPLD 133 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +++ +L HL +G+A K LAK+A+ K + + + Sbjct: 134 LAWQLQQELLTDLHLKCSIGVAPNKFLAKMASDMKKPMGI------TVLRKQEVPVKLWP 187 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++D+ GIG++ + ++ A+GIKT+ DLA D +R ++ GE ++ Sbjct: 188 LPIEDMRGIGKKTAPQMKALGIKTIGDLAAADPEQLRPLLGKNTMTYIQRANGEDDREII 247 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + S + + +R A + +E++ E + +S I+ F Sbjct: 248 S-DAEIKSMSQSTTLNYDFSTEEEVRTLFRKLANKLSERMIEEDKMGTIVSISIRYFDFN 306 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-- 356 N S KL P S D+ A D + + G+ +G S Sbjct: 307 TNV------RSRKLDHPVYRSEDLFELAMELFDENY-EDQPMRHLGIGVGSLSSIHDQKI 359 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEG-RGTLYFAGQGIQQQWQMKRAM 406 Q+NLF+ P L ++ LN + G L A I++ K Sbjct: 360 QMNLFEAPPVDPACATLD-LISQLNQQLTLGGKLTTAAALIKKTAADKHKK 409 >UniRef50_C1A1E2 DNA polymerase IV n=28 Tax=Actinobacteria (class) RepID=C1A1E2_RHOE4 Length = 432 Score = 287 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 100/404 (24%), Positives = 163/404 (40%), Gaps = 24/404 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D+++FYAS E P L G+PV+V G V+A + EAKA GV+ + + L Sbjct: 38 ILHADLDSFYASVEQRDDPTLAGRPVIVGG---GVVLAASYEAKAFGVRTAMSGGQARSL 94 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFG 120 + VV Y+ S V + SP VE SIDEAF ++ G+ + G Sbjct: 95 CPQAIVV--PPRMSAYSQASKDVFDVFHDTSPLVEGISIDEAFLEVGGLAKIVGNPLQIG 152 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +R V ++ L + VGIA+TK LAK+A+ AK E + + + LP Sbjct: 153 ANLRRDVAEQVGLPITVGIARTKFLAKVASAFAKPDGLLR------VPPEGETEFLHPLP 206 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEE 239 V+ +WG+G+ + KL I TV D+A D I + Sbjct: 207 VEKLWGVGKITAHKLRNFDIVTVGDIARHDESSIVSILGGGAGRHLYALSHNRDPRPVRA 266 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + + + G + ++ S R + ++RS + R ++ ++ + F Sbjct: 267 Y-RGRSSMGAQHALGRGSHSRAELDASLMSLVDRVSRRMRSAQRTGRTVTLRLRFADFT- 324 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVAQ 357 + S L T D+ +++NA+ LD A GV + + G Q Sbjct: 325 -----RATRSHTLRRSTADTAELLNASMVLLDEAVPMIADKGITLIGVAVSNLDRDGAEQ 379 Query: 358 LNLFDDNAPR--PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 L L D P + L + MD++ K G L + Sbjct: 380 LELPFDGPGFAGPDTVALDSAMDSVRKKFGSAALTRGVLLGRDP 423 >UniRef50_B1CA62 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CA62_9FIRM Length = 413 Score = 287 bits (733), Expect = 7e-76, Method: Composition-based stats. Identities = 91/404 (22%), Positives = 164/404 (40%), Gaps = 28/404 (6%) Query: 1 MFALCDVNAFYASCETVFRP-------DLWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 + DVN+ + S + + DL P V G V+A++ +AK GV+ Sbjct: 8 IIFHIDVNSAFLSWQAAYNKKMGNKEVDLRSIPSAVGGDEAKRKGVVLAKSQKAKKYGVR 67 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+ F+ + +V N+++Y SN++ L E S +E YSIDE F D T Sbjct: 68 TGESLFEARKKCPNLLIV--KPNFKIYRMYSNKLFDLLSEYSDTIERYSIDECFLDYTSS 125 Query: 111 RNCRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + EI+ + + TV +GI+ K LAK+A K + V Sbjct: 126 QKLFGEPIKAAYEIKERIKRELGFTVNIGISNNKLLAKMAGDLKKPDK------VITLFP 179 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRE 228 E + M L +++++ +GR+ +KL+++GIKT+ DL + F+ +F Sbjct: 180 EEIEEKMLPLTINELFMVGRKTKEKLNSLGIKTIGDLNKCSMGFLISNFKKAQGTMLYNY 239 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G ++ E + + I S + TD +++ + + +LR + I Sbjct: 240 SHGIDESEV-EISRQTKSIGNSTTLKNDTTDINEVKKVFLALSDSVGTRLRRKDLKGNTI 298 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + IK + F + S L T + I A + + W + G+ +G Sbjct: 299 TVTIKNNLF------HSYSHQRTLPYFTNSTNTIYEQAFKLFNEFWNNDA-IRLLGISVG 351 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 V QL+L ++ +++ VMD L G+ + Sbjct: 352 GLNKDEVNQLSLIEEKIENEKMKKIEEVMDKLRDNYGQDIIKRG 395 >UniRef50_A8RF31 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RF31_9FIRM Length = 413 Score = 287 bits (733), Expect = 8e-76, Method: Composition-based stats. Identities = 84/416 (20%), Positives = 159/416 (38%), Gaps = 24/416 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + D+N YA E + P L + V + G ++A+N +AK GVK G+ + Sbjct: 4 VILHSDINHCYAQIEEMKFPQLREVCMAVGGSERSRHGIILAKNDKAKECGVKTGESLRE 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 + ++ NYE Y S +V + S +VE + +DEA+ D++ Sbjct: 64 AFVKCPQLCII--PPNYEEYVYYSEKVKEIYQAYSDKVESFGLDEAWIDVSESTKLFGSG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + EI+ V L+V +GI+ K AK+ + K + R ++ Sbjct: 122 YEIATEIQKRVKDELGLSVSIGISYNKVFAKMGSDMKKNMG------LVEITRTNFRDML 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP++ ++ +G+ +KKL I T+ +LA ++++HF + E G+ + Sbjct: 176 WPLPIEHLFYVGKATAKKLRQYSIVTIGELAQLPRVWLKEHFGKMGELVWWFANGQDISE 235 Query: 237 L--EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + I + + + + A A +LR + IS ++ Sbjct: 236 VAFHNQKEEVKSIGNGITTPRDLCTFEEAKIVFYVLAESVASRLREQGLQGNVISISLR- 294 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-SQ 353 N+ + K+ T + +I+ L + + V + + Sbjct: 295 -----NKYLESITRQCKIDKATNLASEIMEHILLLLKENYDFHIPLRSVAVSISGIQYME 349 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ---QWQMKRAM 406 QLNLF D ++L V+D + K G + I Q +Q +R Sbjct: 350 CYRQLNLFVDEKNYQKQQRLEQVVDDIRKKYGFKKIQRCCMLIDQGLSDFQPQRDH 405 >UniRef50_C6XT23 DNA-directed DNA polymerase n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XT23_PEDHD Length = 385 Score = 286 bits (731), Expect = 1e-75, Method: Composition-based stats. Identities = 78/395 (19%), Positives = 148/395 (37%), Gaps = 21/395 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D+++F+ S E L GKPV+V ++ G V + + EA+ GV P + Sbjct: 7 IIHMDLDSFFVSVEIKKNSKLAGKPVIVGGLSDRGVVTSCSYEARKYGVHSAMPSRLARQ 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L V N + Y++ S V L++ P +E SIDE + D+TG+ F Sbjct: 67 LCPHAEFV--RGNMDDYSEHSRMVTEILQQKVPVLEKASIDEHYIDMTGMERFYGCMKFA 124 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 RE++ V + + L V G++ KT++K+A + K + ++ L Sbjct: 125 RELKEQVFKESGLPVSFGLSVNKTVSKIATNECKPNGALQVEQL------EIPSFLNPLS 178 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + + G+G KL MG++ + A + + K ++ G + + Sbjct: 179 IKKIPGLGAATFLKLSEMGVRKIHTFAQIPQQQVYKVLGNNGLSLWQKAHGIDHTPVIPY 238 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ I ++F D+ +RQ I A +LR + + ++ I+ S F Sbjct: 239 -REQKSISKQQTFESDSIDFTQIRQLITGMVIELAYELRKQQKLTACVTIVIRYSNFE-- 295 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + ++ T +I A + + + G+ L + Sbjct: 296 ----TITQQCRIP-YTALDDTLIVKAKELFERAYTRRMLIRLVGIKLSALVNGYEQI--- 347 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 D + L MD + + G + A Sbjct: 348 -DLYSASEEKYNLYQAMDKIRNRYGEKAIALASTL 381 >UniRef50_C8WAH8 DNA-directed DNA polymerase n=3 Tax=Coriobacteriaceae RepID=C8WAH8_ATOPD Length = 444 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 93/418 (22%), Positives = 168/418 (40%), Gaps = 38/418 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 L D++AF+AS E + P+ GKPV+V + G V + EA+ GV Sbjct: 25 IGLLDLDAFFASVEQLDHPEWRGKPVIVGGSPHKRGVVSTASYEARKYGVHSAMASATAV 84 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L + + Y Y++MS+ VM L++ +P VE SIDEAF D+T G + + + Sbjct: 85 KLCPQ--AIWTPGRYNRYSEMSSLVMGFLKDETPLVEQVSIDEAFFDITPGRFSKENPLE 142 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I+ V +T +G+ KT+AK+A+ K + + ++ Sbjct: 143 ICKRIQKKV-AALGITCSIGLGTNKTIAKIASEQEKPRG------LTAVFPGTESHFLAP 195 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++ + GIG ++K L GI+T+ +L+ D ++ + + +G+ ++ Sbjct: 196 LPIEAMSGIGPAMAKTLHQQGIRTLGELSRADSTYLTSFVGNTASKMILRAQGKEVSEVH 255 Query: 239 EFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 E A + + + R+F + D + +AI + +LR + ++ +K Sbjct: 256 EAAHPRDVKSVSNERTFETDLFDKQEIEEAIRHISGVVGRRLRKKQLQGFTVTLKVK--- 312 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG-- 354 ++ ++ PT D A L IW+ G + GV + F + Sbjct: 313 ---ASATESHTVQKRMSIPTDDEHLFAEIAVNLLPTIWKEGQPVRLLGVGISSFTDEDNS 369 Query: 355 -VAQLNLFDDNAPRPG---------------SEQLMTVMDTLNAKEGRGTLYFAGQGI 396 Q +LFD + L V D L K G + + Sbjct: 370 KPVQTSLFDQSEDTFNTGASVPTTKKKPRSDLRHLSEVTDKLKDKFGASVVQYGRDLR 427 >UniRef50_A3CSG3 DNA polymerase IV n=4 Tax=Methanomicrobia RepID=DPO4_METMJ Length = 360 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 91/370 (24%), Positives = 152/370 (41%), Gaps = 21/370 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D+++F+AS E P L G+PV+V G V + EA+ GV G P Sbjct: 7 IVLHVDMDSFFASIEVRRDPSLAGRPVIVGADPKGGAGRGVVSTCSYEARRYGVHSGMPI 66 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + DL V + YA +S +M+ L + R+E SIDEA+ D++ + Sbjct: 67 SRAFDLCPHG--VYLPVDRPFYASVSVEIMALLSRHAGRIEQVSIDEAYLDVSDAGSFPA 124 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 I+ V + T LT VG+A K +AK+A+ K + + + Sbjct: 125 AGALAAAIKREVREETGLTCSVGVAPGKAVAKIASDFQKPDG------LTIVRPDEVAGF 178 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 +++LPV + GIG++ + L GI TV DLA D++ + R RG Sbjct: 179 LASLPVGRIPGIGKKTGEDLRQAGILTVGDLARRDVQEVIARLGRSGVRVHHLARGIDDG 238 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 +++ + I +F D P + + A AE LR+++ CR ++ ++ Sbjct: 239 EVQ-GREGCKSISRETTFEADTADPPVLAGTLAELADDVAETLRADNLRCRTVTVKVRYR 297 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + + S L T D I AA+ L G + GV L Sbjct: 298 GFQTH------TRSRTLPRFTSDPETIRRAASGLLLPF-LNGEPVRLIGVRLSMLEGGCT 350 Query: 356 AQLNLFDDNA 365 Q ++ + + Sbjct: 351 RQASIDEFFS 360 >UniRef50_Q2P505 Polymerase V subunit n=4 Tax=Xanthomonadaceae RepID=Q2P505_XANOM Length = 428 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 174/432 (40%), Positives = 235/432 (54%), Gaps = 17/432 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FYASCE VF+P+L G+P+VVLSNNDGC IAR+ EAKALGV MG P K Sbjct: 1 MFALIDGNNFYASCERVFQPELRGRPLVVLSNNDGCAIARSDEAKALGVTMGQPIHKVPT 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 RR + S+N+ LY D+++R+ L + +PRVE+YSIDE+F DL G RD Sbjct: 61 QIRR-RLALRSANFGLYGDIASRIGVILRQAAPRVEVYSIDESFLDLAG---IRDRRQLA 116 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK---------KWQRQTGGVVDLSNLER 171 ++R V Q T + +GIA TKTLAKLAN AK + + Sbjct: 117 VDLRERVYQWTGIPNCIGIAPTKTLAKLANRVAKDAARKPGSYPADLAGVCDLAALSASE 176 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 ++ A V D+WG+GRR S +L A G+ T DL D + F VV+ R REL+G Sbjct: 177 LDAVLRATSVGDLWGVGRRWSARLQARGVYTAADLRDAAADDLLAEFGVVMARAQRELQG 236 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 CL+LEE P +Q+I+ SRSFG +++ M +A+ ++A RA EKLR+ I F Sbjct: 237 HACLELEEVEPDRQQIMVSRSFGTWVSNPQDMSEALATFAMRATEKLRARGLTSSAIGIF 296 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 T F P + S + L + T DSR ++ R + G Y+KAGV L D Sbjct: 297 ADTDSFKPGVPQHNPSRTAPLASATSDSRIVLTTVRRLFQGFMREGFAYKKAGVCLMDLA 356 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRAMLSP 409 Q +LF R G E+LM+ +D +N + GRGT G Q W ++ +LS Sbjct: 357 KPEDLQGDLFTPA--RIGHEKLMSALDAINRRFGRGTAGLGASGWQNSPSWASRQELLSG 414 Query: 410 RYTTRSSDLLRV 421 R+TT +DL R Sbjct: 415 RFTTSLADLPRA 426 >UniRef50_C6NY09 DNA polymerase IV n=2 Tax=Bacteria RepID=C6NY09_9GAMM Length = 390 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 83/353 (23%), Positives = 142/353 (40%), Gaps = 18/353 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+A+ E RP+L G PV+V N G V + EA+ G++ + + Sbjct: 31 IIHVDMDAFFAAVEQRDRPELRGLPVIVGGDPNVRGVVATCSYEARRFGIRSAMSAARAR 90 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L + + + Y ++S +VM+ L + VE S+DEAF D+T + Sbjct: 91 SLCPQ--AIFVRPRMDAYREVSRQVMTILRSYTALVEPLSLDEAFLDVTAATTDGTLAVE 148 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REI + + T LT G++ K LAKLA+ K + + ER ++ Sbjct: 149 IAREILDRIHRETGLTASAGVSYNKLLAKLASDWRKPHG------LFVIPPERGLAFLAP 202 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G KKL AMG++TVLDL + + F+ HF R ++ Sbjct: 203 LPVGKLHGVGPATVKKLSAMGVETVLDLRNLSLEFLVTHFGKSGGWFYDVARAIDERPVQ 262 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F + + D M + AA+ A +L+ H + + F Sbjct: 263 PS-RQRKSVGTERTFSKNLADRSVMLTTLQEMAAQVAARLQVLHLAGHTVHIKARFPDFT 321 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + + + I LD + G+ + Sbjct: 322 ------TVTRAYTATEGIGSADAIAAWLPELLDRAVPKSTSVRLLGITMSGLV 368 >UniRef50_C4GAM5 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4GAM5_9FIRM Length = 425 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 93/423 (21%), Positives = 160/423 (37%), Gaps = 28/423 (6%) Query: 1 MFALCDVNAFYASCETVFR-------PDLWGKPVVVLSNN---DGCVIARNAEAKALGVK 50 + DVN+ + S R DL P + + G + A++ AK G+ Sbjct: 5 IIFHVDVNSAFLSWTASDRMAKGIDKVDLRDLPSAIGGDPKTRHGIITAKSIPAKRYGIV 64 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + +V +Y LYA S +M L + +P V+ +SIDEAFCD+TG Sbjct: 65 TGEPVSQALRKCPSLILV--PGDYSLYARQSQALMDLLRKYAPAVDPFSIDEAFCDMTGT 122 Query: 111 RNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + D F +++ + + TV VGI+ LAK+A+ K + T Sbjct: 123 ASLYGDPVLFAHKLKDEIRRDLGFTVNVGISSNHLLAKMASDFTKPDRVHT------LWP 176 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 + M LP D+ +G ++KL ++GI T+ DLA T + HF + + Sbjct: 177 REIPRKMWPLPAADLLFVGESTAQKLKSLGILTIGDLAGTPEDLLVSHFGKHGSQMLAYA 236 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G L + + + D R + S A ++R + R + Sbjct: 237 NGTEPSDLTSRHRKSRGFSNEITISHDLVDREEARLILLSLCETLAARIRLQGDKIRLVG 296 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 + K S F S +L + ++ I A L +W G + GV + Sbjct: 297 VYYKDSSF------VSASRQTRLNRSSSSTQTIYETALSLLHELWD-GRPLRLLGVRGSE 349 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW--QMKRAML 407 + D +QL +D + K G ++ A + + +R+ Sbjct: 350 IDKDSGSYQMDLFDAGKNRKLDQLDAAVDQIRDKFGDSSIRRAVFLGADETDLKKRRSNR 409 Query: 408 SPR 410 S + Sbjct: 410 SRK 412 >UniRef50_B1YK83 DNA polymerase IV n=1 Tax=Exiguobacterium sibiricum 255-15 RepID=DPO4_EXIS2 Length = 360 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 84/370 (22%), Positives = 148/370 (40%), Gaps = 20/370 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E RP L G PV+V + G V + EA+ G+ P + Sbjct: 6 IIHVDMDAFYASVEQRDRPHLKGVPVIVGGPPHARGVVATCSYEARKYGIHSAMPSRRAF 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L R V +E+Y +S ++M E++P VE S+DEA+ D+T T Sbjct: 66 QLCPR--AVFVRPRFEVYRAVSAQIMELFLEVTPLVEPLSLDEAYLDVTENNLQMTSATH 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I A + +RT LT G++ +K +AK+A+ K + + + +S Sbjct: 124 IAQYILAEIKRRTGLTASAGVSNSKLVAKIASGHQKPNG------LTVLPPDAVLPFLSG 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQL 237 L + D+ G+G+ + L G TV D+ + I +R GE + Sbjct: 178 LKIGDLHGVGKVTEQTLQKHGFNTVADIQQSPIAELRGLLGRDRGTELYTMAHGEDERMV 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ I +F E D ++ + + A + L + CR ++ KT F Sbjct: 238 RP-HRERKSIGSESTFEEDTEDIDTIFETLKREALSVVKTLNQKELVCRTVTIKWKTEDF 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 S L T D ++ T+ + I +G + G+ + + +++ Sbjct: 297 Q------SRSKRYTFLEETADEDTLLRVTTKLFNEIEFSG-PIRLIGMSVSHLEAPPLSK 349 Query: 358 LNLFDDNAPR 367 + D Sbjct: 350 QLTWQDIDSY 359 >UniRef50_A0L3I2 DNA-directed DNA polymerase n=1 Tax=Shewanella sp. ANA-3 RepID=A0L3I2_SHESA Length = 416 Score = 285 bits (729), Expect = 2e-75, Method: Composition-based stats. Identities = 154/421 (36%), Positives = 237/421 (56%), Gaps = 10/421 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + ALCD N FY+SCE +F P GKP++V+SNNDG + + EA ALG+K P+F+ + Sbjct: 4 IIALCDGNKFYSSCEQIFNPQYRGKPLIVVSNNDGMTVTLSPEAAALGLKKFTPYFQVAE 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 R GVV SSNY LY+++S++ M YSIDE F + ++L+ G Sbjct: 64 FCRANGVVVCSSNYALYSEISSQFMKVASRECFSYFPYSIDEIFAEFGNDDTPQNLSILG 123 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R++R V + L +GVG+ T TLAK ANHAAK+ + + + ++ A+ Sbjct: 124 RKLRHDVWREVRLPIGVGLGDTLTLAKAANHAAKRLGYRGVC---VIKAHNREAILGAML 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 DVWG+G+RI ++L +MGI T L LA + RK F V +ERT+ +L G ++ Sbjct: 181 TTDVWGVGKRIGQRLSSMGIHTALQLAQMKTKTARKMFGVNIERTIFKLNGTKAFNWDDM 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 K++I +RS G+RIT +++A+ +A AA KLR + R + F +TS + + Sbjct: 241 PVNKRQIFSTRSVGQRITTIEGLKEALSFHACEAARKLRGQKSVARCLVFFAQTSAYDKH 300 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 G S ++ L PT DS I T ++++ + A Y + GV L D QL++ Sbjct: 301 GV-SGFSRTIHLPAPTSDSMIISQQITSAVESFYAAV-PYYRVGVGLLDIEP--GLQLDM 356 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F+DN +P LM+VMD LN + G+G ++ A GI+++WQM+RA LSP Y T +++ Sbjct: 357 FNDNLGKP---ALMSVMDRLNEQMGKGAVFVAANGIEKKWQMRRAFLSPSYLTNWNEIPT 413 Query: 421 V 421 + Sbjct: 414 I 414 >UniRef50_A6DHJ1 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHJ1_9BACT Length = 415 Score = 285 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 160/422 (37%), Positives = 217/422 (51%), Gaps = 17/422 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL D N FYASCE F P L G+ +V+LSNNDGCVIAR+AEAKALG++MG P+F+ + L Sbjct: 10 IALADCNNFYASCERCFNPQLIGRAIVILSNNDGCVIARSAEAKALGIQMGVPFFEIRPL 69 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 GV+ +SSN+ LY D+S RVM L + +E YSIDEAF L + Sbjct: 70 VEMHGVLAYSSNFPLYGDLSARVMQLLHVHAQEIEFYSIDEAFFTLPTT---HCPESYCT 126 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 I+ V Q T + + +GIA TKTLAK+A+ AKK L +++++ + Sbjct: 127 SIKEQVQQCTGIPISIGIASTKTLAKIASKLAKK-----SRGTFLIQEANRQQVLENTLI 181 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 +D+WGIGRR+SK+L GI+T LA D +++ K F V + RT ELRG P L LE Sbjct: 182 EDIWGIGRRLSKRLQNCGIRTAWQLAMADEQYLLKRFGVCMLRTSHELRGIPSLALENSP 241 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 KQ I SR+F E + D S+ Q + +A RA +KLR E Q + F Sbjct: 242 EAKQSIRVSRTFPESVHDLDSLLQQLSFFADRACQKLRQEQQKA------LYVDTFIEGP 295 Query: 302 PYYGNSASVKLLTPT-QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 S + + D A +KAGV L F S+ Q + Sbjct: 296 YPTRKHRSTRFYLDSPSDYTPDFIHAVELSGQKLFHHCEIRKAGVTLHHFSSKNAWQQDF 355 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 F LM D++N K G+G+L F G ++ + A LSPRYTT +DL Sbjct: 356 FSLPRDHQKQNTLMQQFDSINQKFGKGSLRFLSSG--KREFSRGARLSPRYTTSWNDLAL 413 Query: 421 VK 422 VK Sbjct: 414 VK 415 >UniRef50_Q31HB8 ImpB/mucB/samB family protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HB8_THICR Length = 450 Score = 285 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 193/449 (42%), Positives = 270/449 (60%), Gaps = 28/449 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIAR-------------------- 40 +FAL D N+FY SC+ F P L +P VVLSNNDGCV+A Sbjct: 3 VFALVDGNSFYVSCQIAFEPALKNRPAVVLSNNDGCVVAANAKAKAIDAFLRQQKTHFGP 62 Query: 41 -NAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYS 99 +A M P+FK K + V FSSNYELYADMS+R+ S L + + EIYS Sbjct: 63 GGYKAARPESIMFQPYFKVKRYLDQINAVVFSSNYELYADMSSRMHSVLSGFAVQQEIYS 122 Query: 100 IDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 IDE+F DL+G+ + D T +G E++ TV+Q L V VG ++TLAKLANH AKK Sbjct: 123 IDESFLDLSGM-SLSDFTAYGEEMKRTVMQWLGLPVAVGFGSSRTLAKLANHLAKKQPDH 181 Query: 160 TGG-VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF 218 + + + L+ + + DVWG+G+ +S KL+ GI + DL +D++FIRK + Sbjct: 182 QDVLDLTVLSEASLNALLKKVAIRDVWGVGKGLSAKLEMQGILSAYDLKVSDLKFIRKRY 241 Query: 219 NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 ++ LER VRELRGE CL L A + ++II SRSFG+ +T+Y M QA+ SY RAAEK+ Sbjct: 242 SITLERIVRELRGESCLSLGALATSDRQIISSRSFGQPVTEYAEMEQAVASYIVRAAEKM 301 Query: 279 RSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH 338 R++H+ C+F++ I+TSPF +Y NS ++ L+ P+ S +I A R+L +IWQ+G+ Sbjct: 302 RAQHKVCQFVTVSIRTSPFQNRSCFYQNSQTLPLIYPSDSSVLLIKLAKRALRSIWQSGY 361 Query: 339 RYQKAGVMLGDFFSQGVAQLNLFDDNAPR---PGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 YQKAGV+L +G Q++ F N P S++LM VMD LN G+GT+ A +G Sbjct: 362 AYQKAGVILSGVTEKGAVQIDCFAPNPQYSANPKSDRLMQVMDFLNHSMGKGTVQLAAEG 421 Query: 396 I--QQQWQMKRAMLSPRYTTRSSDLLRVK 422 Q WQMKR+ +S RYTTR +LL V+ Sbjct: 422 RKNDQAWQMKRSKMSKRYTTRWDELLTVR 450 >UniRef50_B9HS71 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9HS71_POPTR Length = 1191 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 70/372 (18%), Positives = 135/372 (36%), Gaps = 23/372 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALGVKMGDPWFK 57 D++ F+ S P+L KPV V +++ + + N A+ GVK G Sbjct: 441 IIHVDMDCFFVSVVIRNHPELHDKPVAVCHSDNPKGTAEISSANYPARNYGVKAGIFVRD 500 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K L + +V F N++ Y ++++++ + L + +V+ S DEAF D+T ++ D Sbjct: 501 AKALCPQ--LVIFPYNFKAYEEVADQLYNILHKHCHKVQAISCDEAFLDITE-KDMGDPE 557 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 IR + T T GIA +A+LA +AK + + + Sbjct: 558 LLASTIRKEIFDTTGCTASAGIAGNMLMARLATRSAKPNGQCY------IPSVSVDEYLH 611 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 LP+ + GIG + +KL + T L ++K F E RG Sbjct: 612 KLPIKALPGIGHVLEEKLKKQNVWTCGQLRLISKESLQKDFGLKTGEMLWNYSRGVDNRL 671 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK--- 293 + + I ++G R D + + + + +L+ R + IK Sbjct: 672 VGNIQ-ESKTIGAEVNWGVRFKDLQDSQCFLLNLCKEVSFRLQGCRVQGRTFTLKIKKRR 730 Query: 294 -----TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + + S S+ + D + + + + G+ + Sbjct: 731 KDAGEPAKYMGCGDCENLSHSMTVPIAIDDVEALQRITKQLFGSFCLDVKDIRGVGLQVS 790 Query: 349 DFFSQGVAQLNL 360 + ++ L Sbjct: 791 KLENADPSKQVL 802 >UniRef50_C6NU08 Error-prone repair protein UmuC n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NU08_9GAMM Length = 424 Score = 284 bits (727), Expect = 4e-75, Method: Composition-based stats. Identities = 157/423 (37%), Positives = 242/423 (57%), Gaps = 9/423 (2%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 AL D N FY SCE +F+P L GKPVVVLSNNDGC +AR+ EAKALGV MG P+F+ + L Sbjct: 4 ALVDANNFYVSCERLFQPRLEGKPVVVLSNNDGCAVARSNEAKALGVTMGAPYFQWEKLA 63 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 ++ G+V SSNY LY ++S R+M L + EIYSIDE+F ++ + + + Sbjct: 64 KQHGIVVLSSNYALYGELSARLMRLLGNQAVGQEIYSIDESFLEV--PVADAEADSWAQH 121 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL--SNLERQRKLMSALP 180 +R + ++ L V VG+A TKTLAK+ NH AKK +R GV + +++R+ P Sbjct: 122 LRQQIRRQLGLPVCVGVAPTKTLAKVCNHWAKK-ERTAEGVCIWGDLDPQQRRQWFHETP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V D+WG+GRR++ +L+A G+++ DLA TD R++R+H+ V L R +ELRG PCL LEE Sbjct: 181 VGDLWGVGRRLAARLEAQGVQSAGDLARTDSRWLRQHYGVALARMQQELRGVPCLSLEEV 240 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 +P +Q+I CSRSFG +T++ + +++ + R EKL + + + +++SPF Sbjct: 241 SPPRQQIQCSRSFGRAVTEFSDVLESLSLHTQRGIEKLHEQALWAGSVQVMVRSSPFRE- 299 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 +Y +A +L P++D R + A + +Q G YQK+G++L D +Q Sbjct: 300 -GFYSGTAHRRLPEPSRDYRVLWEAVRSAAAEAFQPGVSYQKSGILLFDLQAQARTGDLF 358 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRAMLSPRYTTRSSDL 418 +E+L + + G+ TL G++ + W M+ SP Y + L Sbjct: 359 AVQEGGEERAERLQEALQRAQDRFGKHTLARGVGGLRQGRDWAMRSDRRSPSYLSDWWSL 418 Query: 419 LRV 421 Sbjct: 419 PVA 421 >UniRef50_A6GF38 DNA-directed DNA polymerase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GF38_9DELT Length = 409 Score = 284 bits (726), Expect = 5e-75, Method: Composition-based stats. Identities = 105/423 (24%), Positives = 178/423 (42%), Gaps = 27/423 (6%) Query: 7 VNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 ++AF+AS E P L GKPV+V G V A + EA+ G P + + Sbjct: 1 MDAFFASIEQRDDPRLRGKPVLVGHAGKRGVVAAASYEARRFGCHSAQPMAVARRRCPQA 60 Query: 66 GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG-REIR 124 +V +E+Y +S + LE +P VE SIDEAF D++G + IR Sbjct: 61 VIV--PGRHEVYLGVSAELFEILEGFTPVVEGLSIDEAFLDMSGTQRLHGPPRVAAERIR 118 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 TV +R LT VGIA K +AK+A+ K + + R+R + LPV ++ Sbjct: 119 QTVAERLRLTCSVGIASAKFIAKIASDQDKPDG------LTVVEPGRERAFLHRLPVREL 172 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK 244 WG+G R + L+ G++T+ D+A+ + + + + G + + Sbjct: 173 WGVGPRTQEVLERYGVRTIGDIAELGLETLERDLGEHGRHLHQLSVGVDPRPVSP-GRER 231 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 +++ +FGE + P + + + R A++L ++ + R + ++ + F Sbjct: 232 KQVSHENTFGEDLRSRPEIEDWLLRQSTRVADRLVAKGLHGRKVHLKLRDASFT------ 285 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH----RYQKAGVMLGDFFSQGVAQLNL 360 + L PTQ++R I A LD + G R + GV + DF A+ Sbjct: 286 TWTRQCSLDEPTQEARVIFARARALLDRLEAEGKLRALRIRLTGVGVSDFRRDAPARQLE 345 Query: 361 F------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 + A E + V+ + + G L AG G ++ A P +TR Sbjct: 346 LLPVEGAAEPATDDRGEAVQDVLSEVRRRFGGKALGLAGVGGIRREARDDAGAVPDLSTR 405 Query: 415 SSD 417 D Sbjct: 406 IDD 408 >UniRef50_C7RFL5 DNA-directed DNA polymerase n=3 Tax=Anaerococcus RepID=C7RFL5_ANAPD Length = 413 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 84/404 (20%), Positives = 160/404 (39%), Gaps = 21/404 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + D+NA YAS E P L G P+ V N G ++A++ EAK GVK G+ ++ Sbjct: 4 VILHSDMNACYASIEQKLNPKLKGIPMAVAGNPKNRNGIILAKSQEAKEAGVKTGEALWQ 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 +V +Y+ Y S E + +VE + +DE F D+TG + Sbjct: 64 AFAKCPDLTIV--PPHYDEYLKHSKLARKIYYEYTNQVEPFGLDECFLDVTGSAHLFGTG 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + +IR + + +TV VG++ K AKL + K V + + ++++ Sbjct: 122 EEIANKIRERMKEEVGITVSVGVSFCKIFAKLGSDMKKPDA------VTIIGEDNFKEIV 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV ++ G+GR +KL+ +GI T+ +LA+TD IR + G Sbjct: 176 WPLPVREMVGVGRATERKLNGIGIFTLGELANTDPDLIRNLLGINGVYLWEYANGLDIRP 235 Query: 237 LEEF--APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + I S + + + + + + + +++LR + F++ Sbjct: 236 VHDRDHKEPVKTIGNSSTCRKDLVNNREVFNVLQELSFSVSKRLRQAGLEAFGVEIFVR- 294 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ- 353 N + + +Q S + ++ + G+ + Sbjct: 295 -----NNELQSYNFQKPIKLASQSSIVLAREGFDLFKEKYKWDFPVRAVGIRAIKLRKEG 349 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 G +Q+++F D E T + + K G+ + F G Sbjct: 350 GGSQMDVFSDYKKLIKDENCDTALYKIRQKYGKDAISFLGLMRD 393 >UniRef50_C7MN57 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=3 Tax=Coriobacteriaceae RepID=C7MN57_CRYCD Length = 454 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 93/422 (22%), Positives = 151/422 (35%), Gaps = 43/422 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 L D++AF+AS E + P GKPV+V N G V + EA+ GV P K Sbjct: 29 IMLLDLDAFFASVEQLDHPAWRGKPVIVGGNPEARGVVSTASYEARTYGVHSAMPSSTAK 88 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L + Y ++S +VMS +E+ SP +E SIDEAF D+T R Sbjct: 89 RLCPNAF--WTPGRFSRYREISRQVMSIMEDESPALEQVSIDEAFLDITPSRAQTEHPAA 146 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I+ V +T +G+ ++K +AK A+ A K + + + ++ Sbjct: 147 IAQRIQQRVC-ELGITCSIGLGRSKAVAKTASEAHKPRG------LTIVPPGYEETFLAG 199 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP + GIG + L GI T+ +A D + F RG + Sbjct: 200 LPTKAMSGIGPAAQQALRKFGITTLGQVAQADDVILNHVFGKNASLMRDRCRGCDDSPVM 259 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + SF +T + A+ + AA+ ++R +S ++ F+ Sbjct: 260 H-PAGAKSVSNEMSFAVDLTSREDIEAALSTVAAKVGRRMRMNGLVGSTLSLKLRRGDFS 318 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 ++ SA L P D I LD +W+ G + G L G Sbjct: 319 IH------SAQCHLDIPCDDEYVITPILFDLLDRVWRPGDSVRLVGCALTHIEEVGAPLQ 372 Query: 359 NLFDDNAPRPG------------------------SEQLMTVMDTLNAKEGRGTLYFAGQ 394 D A L D++ + G L + + Sbjct: 373 ETLFDVADEAKPDDSSTTEPNTQAAQRARMKREDVRAGLKAATDSVRNRFGETALQYGSE 432 Query: 395 GI 396 Sbjct: 433 LR 434 >UniRef50_A0K1P6 DNA-directed DNA polymerase n=7 Tax=Bacteria RepID=A0K1P6_ARTS2 Length = 437 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 166/425 (39%), Positives = 229/425 (53%), Gaps = 11/425 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 AL DVN FYAS E F P L G+P+VVLSNNDGC + R+ EAKALG+ +G+PWFK Sbjct: 18 IALVDVNCFYASAERAFDPSLEGRPLVVLSNNDGCAVTRSPEAKALGIPVGEPWFKIAPR 77 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + G+V SSNYELY D+S RVM L S +E+YSIDEAF + G + +L G+ Sbjct: 78 AKEWGLVAKSSNYELYGDISARVMELLGRYSAWLEVYSIDEAFLGVKGTPD--ELLRLGQ 135 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMSAL 179 I+ V + + V VGIA TKTLAKLAN AK GV + LM + Sbjct: 136 TIKTAVRRNVGVPVCVGIANTKTLAKLANKWAK-NNPGLNGVCHWDSMPPPAREALMGRV 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V ++WG+ R++K+L+ MGI ++LDLA D IR F+VVL RTV EL+G C+ +E Sbjct: 195 SVIELWGVAGRLTKRLNNMGIHSILDLARADPVRIRDRFSVVLMRTVLELQGTACIPMEA 254 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + ++I SRSF IT +RQ + Y +A+ +L + ++ F TS + Sbjct: 255 ERIGRDQLIFSRSFSTPITTAADLRQVMSVYGQQASARLAKHSLQAKVLTAFAGTSHYNP 314 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + Y S V L PT D + AA L I G +Y +AG+M+ D G Sbjct: 315 LDTSYP-SVCVTLPMPTADPVLLTRAAHALLPRIQ-EGTKYVRAGIMVTDLRPSGQQSP- 371 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTL--YFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 A + +++ + + GRG++ AG W M+R MLSPRYTT ++ Sbjct: 372 -LPVFANPHEERGIGPLLEDITRRYGRGSVGLGHAGIRGGPDWSMQRTMLSPRYTTHWNE 430 Query: 418 LLRVK 422 L VK Sbjct: 431 LPVVK 435 >UniRef50_Q8UJK7 DNA polymerase IV 2 n=3 Tax=Bacteria RepID=DPO42_AGRT5 Length = 357 Score = 283 bits (725), Expect = 6e-75, Method: Composition-based stats. Identities = 82/378 (21%), Positives = 146/378 (38%), Gaps = 26/378 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIAR-NAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P+L G+PV V S V+A + EA+ GV+ P Sbjct: 4 IIHVDMDAFYASVEQRDNPELRGRPVAVGSAAARGVVAAASYEAREFGVRSAMPSVTAAR 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 ++ +++Y +S ++ + E + +E S+DEA+ D+T + T+ Sbjct: 64 RCPD--LIFVPPRFDVYKAVSQQIRAIFAEYTRLIEPLSLDEAYLDVTENLKGMEIATEI 121 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIR + Q T L GI+ K LAK+A+ K + + + + L Sbjct: 122 ASEIRERIKQITGLNASAGISYNKFLAKMASDLNKPNGQA------VITPKNGPAFVEQL 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V G+G ++K+ GI+T DL ++F+ +HF RG Q+ Sbjct: 176 AVKKFHGVGPATAEKMHRFGIETGADLKSKSLQFLAEHFGKSGAYFYGIARGIDERQVRP 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + +F I D + A + ++ + ++ +K S F Sbjct: 236 -DRIRKSVGAEDTFSVDINDLDLATAELRPLAEKVWHHCEAQRVSGKTVTVKVKYSDFTQ 294 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S P ++I+ AA+ L ++ + GV L + Sbjct: 295 A------TRSRTSALPVNGIQEILEAASALLATVYPFRRSVRLLGVTLSSLTN------- 341 Query: 360 LFDDNAPRPGSEQLMTVM 377 D A QL + Sbjct: 342 --DQEAEDEEQPQLDLAL 357 >UniRef50_Q2KZS3 DNA polymerase IV n=2 Tax=Proteobacteria RepID=Q2KZS3_BORA1 Length = 360 Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats. Identities = 97/366 (26%), Positives = 153/366 (41%), Gaps = 21/366 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E RP+L G+PVVV V A + EA+ GV + + Sbjct: 8 IVHIDMDAFYASVEQRDRPELRGQPVVVAWTGARSVVCAASYEARRFGVHSAMAVSRAQR 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L V ++ Y +S +V + +E S+DEA+ D+T T Sbjct: 68 LCPD--AVYVPPDFNRYRAVSRQVREIFSRHTDLIEPLSLDEAYLDVTVNKLGLPSATAV 125 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IRA + + T LT G+A K LAK+A+ K + + + + + L Sbjct: 126 AEAIRAQIQRETGLTASAGVAPNKFLAKIASDWNKPDG------LFVLRPAKVLEFLQPL 179 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV V G+GR +L+++GI TV DLA + HF R RG +++ Sbjct: 180 PVRKVPGVGRVTQARLESLGIHTVGDLATCAPAELEHHFGRHGLRLHELARGLDEREVQP 239 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 Q++ +F + + +A+ AAR E+ R + Q R +KT F L Sbjct: 240 -DQPLQQVSAENTFERDLR-LADLGEALDRLAARVWEQARKKGQLGRTAVLKLKTDRFRL 297 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDFFSQGV--A 356 + S+ L P + ++ A R + H RY+ AGV + +F Sbjct: 298 ------LTRSLTLSQPPSSAEELAAIARRLCARVDLPAHTRYRLAGVGMSNFTDPAQSAR 351 Query: 357 QLNLFD 362 Q +LF Sbjct: 352 QPDLFG 357 >UniRef50_Q2LU75 DNA polymerase IV n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LU75_SYNAS Length = 362 Score = 283 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 74/356 (20%), Positives = 135/356 (37%), Gaps = 22/356 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS----NNDGCVIARNAEAKALGVKMGDPWFK 57 D++AF+AS E +P+L GKPVV+ + G V N EA+ G+ P Sbjct: 16 ILHIDMDAFFASVEENRKPELKGKPVVIGGMGDPSKRGVVSTANYEARKYGISSAMPLRT 75 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 L R + +Y+ Y +S + L ++ +E IDEA+ D++ N Sbjct: 76 AYKLCPR--AIFLPVDYKAYLAVSRYFKAVLLNITTIMEDVGIDEAYLDIS--ENRDTDE 131 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +I+ + ++T LT +GIA K LAK+A+ K + + + E + Sbjct: 132 KISEKIKTGIYEKTGLTCSIGIAPNKLLAKIASDMNKPDG------LTIFSGEDIENRLW 185 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQ 236 LP+ ++GIG + + L A+ I T+ LA + F RG Sbjct: 186 PLPIRKLYGIGPKTEEHLKALNIATIGQLAALPPEVLVARFGPSYGHYLHEASRGIDESP 245 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + +F ++ ++ + + L + R + I+ S Sbjct: 246 IITSWEP-KSFSREITFQVDEKNWQAIARTLAELTKEVVSDLAEKGYAARNVILKIRYSD 304 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 F + + + +I A L + +G + + GV +G Sbjct: 305 FR------TVTRACSIDQAVGKEEEIRRMAFSCLKRVDLSGKKIRLVGVRVGRLEK 354 >UniRef50_Q6AL48 DNA polymerase IV n=1 Tax=Desulfotalea psychrophila RepID=DPO4_DESPS Length = 376 Score = 283 bits (723), Expect = 9e-75, Method: Composition-based stats. Identities = 84/377 (22%), Positives = 141/377 (37%), Gaps = 18/377 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AF+AS E RP+L KP++V G V EA+ G+ + Sbjct: 6 IIHIDMDAFFASIEQRDRPELRKKPLIVGGLPRGRGVVATCCYEARRYGIHSAMSANRAY 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L V LY ++S ++M+ E + +VE S+DEAF D+T T Sbjct: 66 KLCPH--AVFVKPRMVLYKEVSLQIMAIFREYTKKVEPLSLDEAFLDVTEYLQINGSATL 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REI A + RT L+ G++ K LAK+A+ K T E R+ + Sbjct: 124 LAREICALIKLRTDLSASAGVSYNKFLAKIASDLKKPGGIST------VPPEEARQFIDR 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + +G+G+ K+ ++GI+T DL F+ K F RG + Sbjct: 178 LSIGKFYGVGKITKSKMQSLGIQTGKDLRQYSKDFLMKRFGKAGSFFFYNARGLDERPVC 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + ++ I + + +R + + ++ + L + Q + ++ I+ S F Sbjct: 238 PYQN-RKSIGKETTLVQDTNRPEEIRDILINLSSLLGKALENNSQLAQTLTLKIRYSDFT 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S+ L P DI L + G+ L G A Sbjct: 297 ------TTTRSLSLQKPFSCPADIEECLPSLLTNCNLTHKPIRLLGISLSKLTYIGSAPR 350 Query: 359 NLFDDNAPRPGSEQLMT 375 + S L Sbjct: 351 PIPLPFPKDRRSNCLNR 367 >UniRef50_B2GJQ9 DNA polymerase IV n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GJQ9_KOCRD Length = 412 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 95/394 (24%), Positives = 160/394 (40%), Gaps = 20/394 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVV-LSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++ FY E + P G+PV+V S V++ + EA+ GV P + + Sbjct: 17 ILHVDMDMFYVGVELLDAPQHRGRPVIVAGSGPRSVVLSASYEARRFGVHSAMPVSQARA 76 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-DF 119 V + E YA S VM ++ RVE S+DEAF D++G + Sbjct: 77 RCPS--AVLLEPHREAYAHYSRIVMDIFRSVTDRVEQLSVDEAFVDVSGAIRRCGPPVEI 134 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R +R T+ QRT LT VG+A+ KT+AK+A+ K + + E R ++ L Sbjct: 135 ARGLRRTIQQRTGLTASVGVAENKTVAKIASAHCKPDG------LLVVAPEHTRAFLARL 188 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 PVD +WG+GRR S+ L A G+ TV D+A T + + V + G + Sbjct: 189 PVDRLWGVGRRTSETLRAAGLATVGDIAGTPLPRLHALVGVASGSHLQQLALGHDPRPVT 248 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F +++ +++ + A +LR + ++ + F Sbjct: 249 PT-REEKSLGAERTFQTDLSETAELKRVLLGLCHETAARLRRHGLRAGRVGLKLRYADFT 307 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 S S L P + D+ A LDA+ + + G+ A Sbjct: 308 ------TISRSRTLGHPVTSAHDLYTEAAGLLDALGRRPQAVRLVGIRAEKLVGADHALQ 361 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 + MD ++ + G GT+ A Sbjct: 362 --LSLDGRDAEWGAAEEAMDRVHHRFGPGTVRPA 393 >UniRef50_Q8UFV3 DNA polymerase IV 1 n=118 Tax=Alphaproteobacteria RepID=DPO41_AGRT5 Length = 405 Score = 282 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 89/400 (22%), Positives = 163/400 (40%), Gaps = 19/400 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AFYAS E P+L KPV+V G V A+ GV+ P FK + Sbjct: 23 IAHIDCDAFYASVEKRDNPELADKPVIVGGGKRGVVSTACYIARIHGVRSAMPMFKALEA 82 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 V + E Y+ + + + ++EL+P V+ SIDEAF DL+G Sbjct: 83 CPD--AVVIKPDMEKYSRVGREIRTMMQELTPLVQPLSIDEAFLDLSGTEKLHHDPPARV 140 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + V + ++V G++ K LAK+A+ K + ++A Sbjct: 141 LAKFTGRVEKEVGVSVSAGLSYCKFLAKVASDLQKPRG------FSVVGEAEALSFLAAR 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G+ + L+A GI+ + L + + + + + V+ +R R RG + Sbjct: 195 PVTTIWGVGKAFAATLEADGIRMIAQLQEMEESELMRRYGVMGQRLFRLARGIDERHVH- 253 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + +F I+ + + + S + + A +L+ + + +KT+ F Sbjct: 254 NNDPVKSVSSETTFFHDISRHEDLVPILRSLSEKVAWRLKKSGIAGQTVVLKMKTADFK- 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + +L PTQ + I L+ G +++ G+ + D G+A Sbjct: 313 -----SRTRNRRLDDPTQLADRIFRTGLALLEKETD-GTKFRLIGIGVSDLRDAGLADPP 366 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 D + MD L K G+G++ ++ Sbjct: 367 DLVDRQATRRAAAEAA-MDKLRDKFGKGSVETGYTFRTRK 405 >UniRef50_C8WRW0 DNA-directed DNA polymerase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WRW0_ALIAD Length = 409 Score = 281 bits (718), Expect = 4e-74, Method: Composition-based stats. Identities = 87/404 (21%), Positives = 151/404 (37%), Gaps = 26/404 (6%) Query: 7 VNAFYASCETVFRP-DLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFKQKDLF 62 +NAFYASC P GKP+ V + G V+ + EA+A GVK P + Sbjct: 1 MNAFYASCHAAVDPARYAGKPIAVAGDPSTRHGIVVTASYEARARGVKPPMPVHQALARC 60 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 ++ ++ LY + +V + + E +P VEI SIDE + D+T V R Sbjct: 61 PE--LIVVRPDFHLYRAYARKVFAIVREFTPDVEIVSIDECYADVTHVPGGDRPVHLARA 118 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 I+A +L L +G+A K LAK+A+ K E R L+ L ++ Sbjct: 119 IQARLLDSLGLPSSIGVAPNKFLAKMASDMKKPMGI------TELRSENIRSLLWPLAIE 172 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 + G+G +K+L +GI T+ DLA + + + G LE Sbjct: 173 HMHGVGPSTAKRLRRLGILTIGDLAVQSLDVLARALGPRAAELKARANGIDPRPLETEPQ 232 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 + + S + + + + + R A ++R R ++ ++ + Sbjct: 233 PPKSVGHSMTLAKDAQTFAEVEGVVMDLCDRVASRMRRYGLMGRVVAVAVR------DRR 286 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF- 361 + L T + + ++ AA IW + GV + + + L Sbjct: 287 MRTSRHQDTLATYVRHTGELFQAARALFQRIW-PTEPVRLLGVSVEGLVPRDGQGVQLHL 345 Query: 362 ------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 E+L +D + AK G + Q+ Sbjct: 346 WDAVPTAGEPRDERLEKLERAIDEVRAKFGPSAIRLGRSLSGQR 389 >UniRef50_C2BWE4 DNA-directed DNA polymerase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWE4_9ACTO Length = 456 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 159/427 (37%), Positives = 228/427 (53%), Gaps = 14/427 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 FAL DV++ +ASCE +F P+L+G+PVVVLSNNDGCV+AR+ EAKALG+KMG PWF+ + Sbjct: 38 FALVDVDSCFASCERIFHPELFGRPVVVLSNNDGCVVARSREAKALGIKMGMPWFQIRAR 97 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 CGVV SSNYELY +S R+M L + S VE+YSIDEAF L G R Sbjct: 98 AEACGVVARSSNYELYGSISARIMEILRQFSASVEVYSIDEAFLTLYGRPTEFVG--IAR 155 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLMSAL 179 +R+ +L + V VGIA T+TLAKLA+H AK GGV + +++ Sbjct: 156 SLRSRILHDLGVPVSVGIAPTRTLAKLASHGAK-HTPALGGVASWDAYTPAQHDRILRGT 214 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + D+WGIGRR+ +L+A+GI L L + IR+ FNV L++TV EL G PC+++ E Sbjct: 215 EIADLWGIGRRLKNRLEALGITDALQLQRANPGEIRRRFNVNLQQTVLELNGVPCIEIIE 274 Query: 240 FAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + +++ SRSF + Q + Y+ +LR + + F T+ + Sbjct: 275 RDAVRTHQVMYSRSFSTPVRGVTQAYQVLSIYSQNVTHRLRRQQMTAGALWAFASTAWYK 334 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-SQGVAQ 357 P+ SA L T D ++ AA + L Y +AG+ L D Sbjct: 335 E--PFSRISAMAPLHPRTDDPVTVLKAAAKVLLGQVDPRADYVRAGICLTDLGKPDPQEP 392 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRAMLSPRYTTRS 415 L +F + ++ +D +NA G G++ G++ W MKR MLS R TT Sbjct: 393 LPIFAPDPESRRRGKI---IDRVNAAVGEGSVGLGLAGLKAAPDWTMKREMLSNRGTTHW 449 Query: 416 SDLLRVK 422 S+L V+ Sbjct: 450 SELALVR 456 >UniRef50_B0VP90 DNA polymerase IV, devoid of proofreading, damage-inducible protein P n=12 Tax=Acinetobacter RepID=B0VP90_ACIBS Length = 363 Score = 280 bits (717), Expect = 5e-74, Method: Composition-based stats. Identities = 74/347 (21%), Positives = 143/347 (41%), Gaps = 19/347 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E RPDL PVV+ + + A + A+ G++ + + Sbjct: 4 IIHIDMDAFYASVELRERPDLRHLPVVISSHHPRAVIAAASYPAREFGLRSAMSMSQARK 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L + VV N+E Y +S ++ S ++ + +E S+DEA+ D+T ++ T+ Sbjct: 64 LCPQ--VVIIEPNFEKYRAISAQIHSIFQQYTTLIEPLSLDEAYLDVTENLKQIASATEV 121 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IR + ++T LT G+A K LAK+A+ K + + + + L Sbjct: 122 AMHIREDIFRQTGLTASAGVAPNKFLAKVASDWNKPNG------LFVIKPSQVASFIQDL 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G+ +KL + + T+ DL + + HF ++ +G ++ Sbjct: 176 PLKKIPGVGKVTQEKLQQLELHTLGDLQKIEEAVLVHHFGKYGQQLYLYAQGIDNRPVQ- 234 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q+I +F T + A + + L + R ++ +K F Sbjct: 235 AERARQQISKETTFDSDFT-LAQCQSYWHGLAEKVWQSLEKKQLNARGVNIKLKLKNFQT 293 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA-GHRYQKAGV 345 + S P +D+I L+ + +++ GV Sbjct: 294 LQ------HSKSFKNPIHSQQDLIQVLFLLLNEMHIPENFQFRLIGV 334 >UniRef50_B3T119 Putative impB/mucB/samB family protein n=1 Tax=uncultured marine microorganism HF4000_008B14 RepID=B3T119_9ZZZZ Length = 380 Score = 280 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 81/367 (22%), Positives = 147/367 (40%), Gaps = 18/367 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYA+ E + PDL GK V+V + G V + EA+ G+ P Sbjct: 20 VLHADLDAFYAAVEVLDDPDLAGKAVMVGGDPENRGVVATASYEARVFGIHSAMPMRTAV 79 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L ++ ++ Y +S VM + + VE S+DEA+ D+T + Sbjct: 80 RLCPHGIIIH--PRFDRYRQLSRAVMDVFHDFTELVEPLSMDEAYLDITEAVDAGRLPLA 137 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E++ V + LT+ VG +K++AK+A+ K + + +R+ ++ Sbjct: 138 IALELKNRVHENIGLTLSVGAGTSKSVAKIASDLHKPDG------LVVVAPGEEREFLAP 191 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L V +WGIG + ++L A GI+T+ DLA + ++ F GE + Sbjct: 192 LAVGKLWGIGPKTGQRLRADGIETIGDLASQSTGWFQRRFGKRALDVQSRAMGEDREPVR 251 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + +F ++ ++ + A R A+ L + + ++ + + F Sbjct: 252 TE-REAKSVSAESTFATDLSGEGTLYPHLSRLAGRVAQHLEGKQLKGKTVTVKARLADFT 310 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + L PT I+ A R G ++ GV + F QL Sbjct: 311 ------TFTRQTTLPYPTGSDTVILETAWRLFSRELTPGRSFRLLGVGVSGFTEDEEFQL 364 Query: 359 NLFDDNA 365 LF + Sbjct: 365 PLFGEEQ 371 >UniRef50_Q2S2C0 Putative DNA polymerase IV n=2 Tax=Bacteria RepID=Q2S2C0_SALRD Length = 373 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 82/366 (22%), Positives = 148/366 (40%), Gaps = 18/366 (4%) Query: 2 FALCDVNAFYASCETVFRPD-LWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYA E PD GKP+ V + G V + EA+ GV P + Sbjct: 21 IVHVDMDAFYAQIEQRDFPDRYAGKPIAVGGDPPRGVVQTASYEARPYGVHSAQPAVEAD 80 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 ++ S ++Y + S R+ L + VE S+DEA+ D+T + R T Sbjct: 81 RKCPD--LIFVSPRMDVYQEESKRIRKILRRYTDLVEPLSLDEAYLDVTEPKTGRPSGTL 138 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R +RA + + T LT G+ K +AK+A+ K + + + Q + ++ Sbjct: 139 IARRLRAEIYEETGLTASAGVGPGKFVAKVASDLDKPDG------LTVVRPDEQMEFIAQ 192 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++ GIG + K+ +GI+T DL +T R + HF G ++ Sbjct: 193 LPIEKFHGIGPVTAAKMQELGIQTGADLQETPERTLIHHFGKRGRHFKTLAVGTDDRPVQ 252 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F E I +M + A R A++LR ++ R ++ +K+ Sbjct: 253 PDRD-RKSVGAERTFPEDIARAETMLDRLSPIAERVAQRLRQANRKGRTVTLKLKSHDHQ 311 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 ++ + + P + ++ R L + G+ + + A Sbjct: 312 VS------TRQTTVDRPLRAEDALMTITERLLRRPHPPDEPVRLLGISVSSLTDEERAGG 365 Query: 359 NLFDDN 364 L D Sbjct: 366 QLEFDF 371 >UniRef50_B4WH69 ImpB/MucB/SamB family n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WH69_9SYNE Length = 371 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 78/360 (21%), Positives = 144/360 (40%), Gaps = 19/360 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P+L GKPV V + G V A + EA+ G+ P Sbjct: 23 IIHIDMDAFYASIEQRDNPELRGKPVAVGGLPSQRGAVCAASYEARKYGIHSAMPSRSAI 82 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 + ++ +E Y +S + + + + VE S+DEA+ D++ + Sbjct: 83 TRCQH--LIFVKPRFEHYRAVSAEIRAIFFDYTELVEPLSLDEAYLDVSVDKQGIGSAVA 140 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++IR + LT G++ K LAK+A+ K + E + + Sbjct: 141 IAKQIRDRIRTDLQLTASAGVSINKFLAKIASDLNKPDGLSF------ISPEEAKTFIEQ 194 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L ++D +G+G + K+ ++GI T DL + + F V R R E + Sbjct: 195 LRIEDFYGVGPATATKMKSLGIHTGADLKTWTQAELTQTFGKVGSYYYRVARAEDNRPVN 254 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ I RSF ++ M A+ + A +++L+ + ++ IK + Sbjct: 255 P-NRIRKSIGAERSFFRDLSQIEDMETALANIATEVSQRLQKNKRQGHTLTLKIKYDNYD 313 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S L TP + + I+ ATR L + + G+ + + + Sbjct: 314 ------TITRSRTLETPI-EEKQILQIATRLLSLHVERDRPVRLLGITVSNLIAPQPYHQ 366 >UniRef50_C8WGA6 DNA-directed DNA polymerase n=3 Tax=Bacteria RepID=C8WGA6_EGGLE Length = 448 Score = 280 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 87/413 (21%), Positives = 149/413 (36%), Gaps = 27/413 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D+NAFYAS E RP+L G P+VV + G V+A++A+AKA GVK G+ ++ Sbjct: 29 VIFHSDMNAFYASVEQAERPELRGVPLVVGGHEELRHGIVLAKSAQAKAAGVKTGEALWE 88 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RD 115 + G+V YE+Y S + + VE + +DEA+ DLTG D Sbjct: 89 ARAKCP--GLVVVPPRYEVYQAYSAMARRIYYQYTDLVEPFGLDEAWLDLTGSLPLLGGD 146 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 EI + TV VG++ K AK + K + R Sbjct: 147 PARTAAEISGRIKAELGCTVSVGVSWNKIFAKFGSDFRKPDAI------TFITPQNYRCR 200 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + PV ++ +G KL + GI + +LA +R+ + RGE Sbjct: 201 VWEAPVSELLYVGAATRAKLHSSGIDRIGELACASPELLRRRLGKIGLVLRAFARGEDAT 260 Query: 236 QLEEFAPTK-------QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 ++ + + + + I + + + A++LR + Sbjct: 261 PVKPYDQARNEVDRTVKSFGNGLTAPHDIVSASDAKALVYLLSESVAQRLREARFRASTV 320 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG--HRYQKAGVM 346 S ++++ S L T + + A L A H + V Sbjct: 321 SIGVRSARDLA-----SYSRQTTLRRATNVTGVVARTAWGLLAANEPLDGEHPLRGLHVR 375 Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + Q +A R E L +D L + G + + + + Sbjct: 376 ASNLEPCDAPQQLELAFDARRRMLEDLDETIDDLRRRFGNTCIQRGAELLDES 428 >UniRef50_B0MAH2 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MAH2_9FIRM Length = 402 Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats. Identities = 88/410 (21%), Positives = 157/410 (38%), Gaps = 28/410 (6%) Query: 1 MFALCDVNAFYASCETV-------FRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 + DVN+ Y S E V DL P ++ G V+A + AK G++ Sbjct: 7 VIFHIDVNSAYLSWEAVYGISVRKDEVDLREVPSIIGGDESKRRGIVLAASIPAKKKGIR 66 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 + + + ++ + +Y S + + SP +E +SIDEAF D+T Sbjct: 67 TAETVREALNKCPD--LIIRPPCHGMYDKFSKAFLKEALKFSPVLEKFSIDEAFLDMTET 124 Query: 111 R-NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + + ++ + ++ TV +G+A K LAK+A+ K + T Sbjct: 125 VGQYKSPYEAACLLKDRIYEKLGFTVNIGVAPNKLLAKMASDFEKPNKVHT------LFR 178 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRE 228 E M LPV+++ +G KKL +GI+T+ +LA + ++ H + Sbjct: 179 EEVPNKMWPLPVENLLFVGPATKKKLHNLGIRTIGELAHINPELLKSHIGNKHGIQIYEY 238 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G +E + S + I + S A A +LR++ I Sbjct: 239 ANGIDRAPVEAQQADSKGYGNSITLPSDIDSLEEADTVVLSLAETVASRLRADRVKASCI 298 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + IK F +S KL PT + +I+ AA ++ G + GV Sbjct: 299 TVEIKDCQFR------RSSHQKKLFAPTDITNEIVQAAKELYREKFR-GTSVRLIGVRAS 351 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 D + AQ++ F + + L +D + K G+ + A + Sbjct: 352 DITKEEFAQMD-FLSDKKKEKLRMLDQSIDAIRIKYGKDAVQRARFLGGK 400 >UniRef50_Q1QXW8 DNA-directed DNA polymerase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXW8_CHRSD Length = 419 Score = 280 bits (715), Expect = 8e-74, Method: Composition-based stats. Identities = 168/424 (39%), Positives = 228/424 (53%), Gaps = 9/424 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N FYA+CE +F P L G P+ VLSNNDGCVIAR+ E KAL + MG P K Sbjct: 1 MFALIDCNNFYAACERLFEPRLEGVPLGVLSNNDGCVIARSEEFKALDIPMGIPTHKIAP 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 RR +V SSNY LY D+S RV L + P +E YSIDE F DL G+R D G Sbjct: 61 HLRR-RIVLKSSNYTLYGDLSARVQQVLAQQVPTLEPYSIDECFLDLRGMR--EDWHALG 117 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE--RQRKLMSA 178 + +V ++ L V +GIA T+TLAKLAN AK Q V + + ++ Sbjct: 118 ATLVRSVQRQVGLPVSIGIAPTRTLAKLANRQAKT-QPTRPQVCVWQSADAPELAAHLAR 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L +VWG+G R++ +L MGI T L +T +R+ F+VVL RT EL G+ CL + Sbjct: 177 LSPREVWGVGERLNARLAGMGIVTAAALRETPDSVLRRRFSVVLARTAAELNGQACLSMG 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + ++ I+CSRSFG+ + D S+ A+ + RA EKLR + I +++T+P Sbjct: 237 DLETPRRSILCSRSFGQPLRDRASLAGALRHHCQRAGEKLRRDAMQASAIGVYMRTNPHH 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + + + L P+ D++ + AA R L +WQ YQK GVML + + +Q Sbjct: 297 ADSFHQACEWAA-LPFPSADTQQLNRAAQRLLARLWQP-AAYQKLGVMLTELTPRRQSQT 354 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 LFD P E LM DT+ A+ GR L Q WQM A S YTTR +L Sbjct: 355 TLFDGAEP-ARQEALMHAWDTIRARYGRQALTLGPQPADAPWQMNSAYRSACYTTRWDEL 413 Query: 419 LRVK 422 R + Sbjct: 414 PRAR 417 >UniRef50_Q04M21 DNA polymerase IV n=98 Tax=Bacilli RepID=DPO4_STRP2 Length = 353 Score = 280 bits (715), Expect = 8e-74, Method: Composition-based stats. Identities = 73/355 (20%), Positives = 146/355 (41%), Gaps = 21/355 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-----NNDGCVIARNAEAKALGVKMGDPWF 56 D++AF+A+ E P L GKPV++ S G V + EA+A GV Sbjct: 14 IIHIDMDAFFAAVEIKDNPKLRGKPVIIGSDPRQTGGRGVVSTCSYEARAFGVHSAMSSK 73 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRD 115 + + + V S NYE Y + ++ + + + +E SIDEA+ D+T + Sbjct: 74 EAYERCPQ--AVFISGNYEKYKAVGLQIRAIFKRYTDLIEPMSIDEAYLDVTENKLGIKS 131 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 R I+ + Q HLT GI+ K LAK+A+ K + + E+ Sbjct: 132 AVKIARLIQKDIWQELHLTASAGISYNKFLAKMASDYQKPHG------LTVILPEQAEDF 185 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + + + G+G++ ++L MG+ T DL + + F + R+ RG Sbjct: 186 LKQMDISKFHGVGKKTVERLHQMGVFTGADLLEVPEVTLIDRFGRLGYDLYRKARGIHNS 245 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ ++ I +++G+ + +++ + + + A L + + + + I+ Sbjct: 246 PVKS-NRIRKSIGKEKTYGKILRAEEDIKKELTLLSEKVALNLHQQEKAGKIVILKIRYE 304 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 F+ + + TQD+ I A + + + + + G+ + F Sbjct: 305 DFS------TLTKRKSIAQKTQDASQISQIALQLYEELSEKERGVRLLGITMTGF 353 >UniRef50_C6W6Q9 DNA-directed DNA polymerase n=3 Tax=Bacteroidetes RepID=C6W6Q9_DYAFD Length = 416 Score = 280 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 88/401 (21%), Positives = 157/401 (39%), Gaps = 26/401 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++ F+ S E L KP++V + G V A + E + GV G P + Sbjct: 12 ILHFDLDTFFVSVERKQDSRLQNKPILVGGTGDRGVVAACSYETRQFGVHSGMPMKMARM 71 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L V+ N E Y+ S V + + P E SIDE + DL+G+ + Sbjct: 72 LCPEATVI--RGNGETYSKHSKEVSEIISQHVPVFEKASIDEFYADLSGMDKYFNCYGMA 129 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++R +++ T L + G+A K ++K+A AK + ++ ++ + Sbjct: 130 SDLRQRIIRETGLPISFGLATNKLVSKVATGEAKPNNQLR------VEPGAEKTFLAPME 183 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V + +G ++++ L+ +GI+ V + + + + K F G + F Sbjct: 184 VQKIPMVGDKMNQTLNNLGIRYVKTIQEMPMEMMGKVFGKNGVALWNRANGLDNSPIVPF 243 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ I R+FG+ D MR+ + + A A +LR+ + +S I+ S F Sbjct: 244 H-ERKSISSERTFGKDTGDVRKMREMVRAMAETLAFQLRTGDKLTSCVSVKIRYSDFN-- 300 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 S +K+ + D +I R D ++ + GV D + NL Sbjct: 301 ----TFSKQLKIAYTSAD-HVLIPHIERLFDQLYNRRMMVRLVGVSFSDLVTGNYQI-NL 354 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKE-----GRGTLYFAGQGI 396 FDD L MD + K G L +A Sbjct: 355 FDDTEE---RLNLYQAMDYIKTKYAYNKDGDQILTWASTMG 392 >UniRef50_A3VP13 DNA polymerase IV n=5 Tax=Alphaproteobacteria RepID=A3VP13_9PROT Length = 422 Score = 279 bits (714), Expect = 1e-73, Method: Composition-based stats. Identities = 85/398 (21%), Positives = 151/398 (37%), Gaps = 23/398 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AF+A+ E P L KPV+V + G V A++ G+ P FK K L Sbjct: 35 IAHVDCDAFFAAIEKRDDPSLVDKPVLVGGGHRGVVSTCCYIARSYGIHSAMPMFKAKAL 94 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 + +V Y + + ++ + L+P ++ SIDEA+ DL G Sbjct: 95 CPQAVIV--PPRGAAYREAAAQIRDLMAPLTPLIQPVSIDEAYLDLGGTERLHGAIPAQL 152 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++ V + +T+ +G++ K LAK+A+ K L ++ Sbjct: 153 LAKLAKDVETQIGITLSIGLSVNKLLAKIASDFDKPRG------FTLIGGTEAANFLAPY 206 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P + GIG R S+KL G +T+ DL R + + GE + Sbjct: 207 PPGLLPGIGTRFSEKLMRDGFRTLGDLQHCSTRELVDRYGEHGLTLRARACGEDPRPV-T 265 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + +F I D ++ + + A + + + + + R ++ +KT+ F Sbjct: 266 VDRETKSVSGETTFRADIGDAAALEDHLYAMARKVSSRAKEKGLAGRVVTLKLKTARFR- 324 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH---RYQKAGVMLGDFFSQGVA 356 + L + +R I + A L A Q G Y+ G + D V Sbjct: 325 -----TFTRRQTLPHASNLTRVIFDCARAMLTAELQKGRTPVTYRLIGAGISDLVPAEVM 379 Query: 357 QLN-LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 LF + + +D LNA+ G ++ Sbjct: 380 HDGYLF--AEDLEKTGRREDAIDKLNARFGEDSIGTMR 415 >UniRef50_B6WBQ9 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WBQ9_9FIRM Length = 399 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 82/405 (20%), Positives = 159/405 (39%), Gaps = 21/405 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFKQ 58 D+N+ YAS E P L K + V + G ++A++ EAK +GVK G+ ++ Sbjct: 5 ILHSDMNSCYASIEAKLNPKLKNKAMAVCGDPRNRHGIILAKSQEAKIMGVKTGEAIWQA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 K +V +YE Y + S + + RVE + +DE + D++ Sbjct: 65 KIKCPNLILV--PPHYEKYLEFSRKARKIYYSYTNRVEPFGLDECWLDVSESLKLFGSGE 122 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + +IR + + +TV VG++ K AKL + K L E ++++ Sbjct: 123 EIANQIRERMKKELGITVSVGVSFNKVFAKLGSDLKKPDAT------TLIKKENFKEIVW 176 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L + + GIG+ +KL+ +GI ++ DLA TD IR + + G + Sbjct: 177 PLDISSIIGIGKATKRKLNGIGIYSLGDLAKTDSDAIRGILGINGLYLWQYANGLDDRPV 236 Query: 238 EE--FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ + + I S + E + + + +++LR + ++ F++ + Sbjct: 237 KDYSYREVIKTIGNSSTLVEDLYTNEEVYNIFQILSLNVSKRLREANLSSMGVNIFVRDN 296 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG- 354 + + PTQ S + A ++ + G+ + Sbjct: 297 N------LFSYEFQSPINNPTQSSIILSEKAIDLFKKKYKWNFPIRALGIRAINLVDDKI 350 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 AQ ++F D E L + + K + L FA ++ Sbjct: 351 PAQTDIFSDYKKIIKKENLDKAIYDIRKKYNKDVLTFASLKNNKK 395 >UniRef50_Q38YP4 DNA-damage-inducible protein P n=30 Tax=Bacilli RepID=Q38YP4_LACSS Length = 376 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 78/365 (21%), Positives = 152/365 (41%), Gaps = 19/365 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYAS E +PDL KP+++ + G V N A+ GV Sbjct: 17 IIHIDMDAFYASIEEREQPDLRQKPLIIARDPSDTGGKGVVTTANYVARQYGVHSAMSAQ 76 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRD 115 K +L + V + N+ LY +S ++ ++ ++E + DEA+ D+T Sbjct: 77 KAAELIPKHQAVFKTPNFPLYQSVSAQIHDIFHTVTDKIEPIAFDEAYLDVTENKLGLTH 136 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + ++ +L+ T L GI+ K LAK+A+ K R L E+ Sbjct: 137 TIEVVAYLQKAILEETQLVSSAGISYNKFLAKMASDYRKPAGR------TLVLPEQAIAF 190 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 +S LP++ G+G++ K+ +GI T DL F+ +HF + R +RG Sbjct: 191 LSRLPIEKFRGVGQKTVPKMQDLGIMTGADLLAQSEMFLMQHFGKLGYGLYRHVRGIDNR 250 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + E+ ++ I ++G+ + ++ + S A A++LR ++ + ++ Sbjct: 251 PV-EYQRERKSIGNEHTYGQPLISEEQVQVQLKSLAVELAQRLRKNQKHGLTVVLKVRNR 309 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + + L ++ ++ A + +I QA + G+ + + Q Sbjct: 310 QYE------TITKRKTLGEYVGNAAELEAIANQIWQSIGQAEVGIRLLGITVTNLAPQTF 363 Query: 356 AQLNL 360 + L Sbjct: 364 ENITL 368 >UniRef50_B9JVH1 DNA-damage inducible protein n=18 Tax=Alphaproteobacteria RepID=B9JVH1_AGRVS Length = 428 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 87/392 (22%), Positives = 159/392 (40%), Gaps = 19/392 (4%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 A D +AFYAS E PDL KP+++ G V A+ GV+ P FK + Sbjct: 46 AHIDCDAFYASVEKRDNPDLIDKPLIIGGGKRGVVSTACYVARIHGVRSAMPMFKALEAC 105 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD--FG 120 V N E Y+ + +V + +EEL+P V+ SIDEAF +L G Sbjct: 106 PD--AVVIPPNMEKYSRVGRQVRAMMEELTPLVQPLSIDEAFLELKGTEALHHAPPALVL 163 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + +TV VG++ K LAK+A+ K + ++ P Sbjct: 164 ARLARRIESEIGITVSVGLSYCKFLAKVASDLQKPRG------FSVVGEAEALDFLAPRP 217 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V +WG+G+ + L+ GI+T+ L + + + + + +R R +G + Sbjct: 218 VTTIWGVGKAFASTLEKDGIRTIGQLQTMEESDLIRRYGSMGQRLARLSKGIDDRDVHT- 276 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + +F + I+ + + + + A +L+ + + +K++ F L Sbjct: 277 NDPAKSVSAETTFFDDISRREDLVPHLRKLSEKVAWRLKKQELAGHTVILKLKSADFKLR 336 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + + +L PTQ + I + L+ G +++ G+ + DF +A Sbjct: 337 ------TRNRRLDDPTQLADRIFRTGLQMLEKEAD-GTKFRLIGIGISDFADPSLADPPD 389 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 D ++ MD L K G+G + Sbjct: 390 LVDPDAARRAKAEAA-MDQLRMKFGKGMVETG 420 >UniRef50_C4F8L3 Putative uncharacterized protein n=2 Tax=Collinsella RepID=C4F8L3_9ACTN Length = 432 Score = 278 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 99/403 (24%), Positives = 160/403 (39%), Gaps = 25/403 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 L D++AF+AS E + P+ GKPV+V + G V + EA+ GV+ + K Sbjct: 23 IGLMDLDAFFASVEQLDHPEWRGKPVIVGGSPEKRGVVSTCSYEARVYGVRSAMSSAQAK 82 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL-TGVRNCRDLTD 118 L + +++ Y +MS RVM+ L + +P V+ SIDEAF D+ G Sbjct: 83 RLCPE--AIWTPGHFDRYREMSARVMAILADETPFVDRVSIDEAFFDISPGRFCDEHPIQ 140 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I V +T +G+ + KT+AK+A+ K + + + ++ Sbjct: 141 IAQRISRRV-SELGITCSIGLGRNKTVAKIASERDKPRG------LTIVTPGTEHGFLAP 193 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + GIG L +GI+T+ LA+ + F + E R G ++ Sbjct: 194 LPVRAMSGIGAAAESALARVGIRTLGQLAEASDGLLSPIFGINTELVRRRAAGLEVSEVR 253 Query: 239 EFAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + I R+F +TD ++ AI + +LR R ++ +K S Sbjct: 254 AIDAPDDVKSISNERTFAHDLTDPSDVKAAIQLLSESVGARLRRRGLAGRTVTLKLKYSF 313 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS-QGV 355 + KL T D A L +IW G + AGV + DF Sbjct: 314 GEGR------TIQRKLAHATDDENVFGAVARDLLASIWTEGMHIRLAGVGVSDFGPDPHG 367 Query: 356 AQLNLFDDNAPR----PGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 Q +LF R L +D L + G + F Sbjct: 368 IQTDLFCAVDERGAMASDKRDLAVTLDALRERFGNDAVAFGRS 410 >UniRef50_Q72MY7 DNA polymerase IV n=18 Tax=Bacteria RepID=DPO4_LEPIC Length = 364 Score = 278 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 84/370 (22%), Positives = 155/370 (41%), Gaps = 26/370 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P+ GKP++V N+ V A + EA+ GV+ P K Sbjct: 8 IIHVDMDAFYASVEQRDFPEYKGKPLIVGGPPNSRSVVSAASYEARKFGVRSAMPCSKAA 67 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 L + V +E+Y ++S ++ E + VE+ S+DE + D+T +N Sbjct: 68 QLAPQAIFVF--PRFEVYKEVSKQIREIFLEYTDLVEMLSLDEGYLDVTFNKKNIPFAVT 125 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +EIR + +RT LT G+ +K ++KLA+ K + + + + Sbjct: 126 IAKEIRTEIFKRTELTASAGVGNSKFISKLASEKNKPNG------LTVVLPDDVISFIDP 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV G+G+ ++K+ +GI T DL I + +HF + + RGE ++ Sbjct: 180 LPVSSFHGVGKVTARKMKELGIYTGKDLRTKSIDELVQHFGKMGIYYYKISRGEDERMVQ 239 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F DY + + + A +L + + ++ IK F+ Sbjct: 240 SS-RERKSLGAESTFDRDKLDYDDLLKQLKDVAVVVERRLEKKDFAGKTLTLKIKFYDFS 298 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR-------YQKAGVMLGDFF 351 L + S L P + ++ + A + ++ + + G+ L Sbjct: 299 LK------TRSKTLSEPIFKADELYSTAIELFEEFFEIKYGKKSAIKAIRLLGISLSHPN 352 Query: 352 SQGVAQLNLF 361 S+ NLF Sbjct: 353 SEN-EDPNLF 361 >UniRef50_Q654Y6 Os06g0691000 protein n=7 Tax=Poaceae RepID=Q654Y6_ORYSJ Length = 1125 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 70/426 (16%), Positives = 151/426 (35%), Gaps = 38/426 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALGVKMGDPWFK 57 D++ F+ S +P+L KPV V +++ + + N A+ G+K G + Sbjct: 379 IIHIDMDCFFVSVVIRNKPELHDKPVAVCHSDNPKGTAEISSANYPARNYGIKAGMFVRE 438 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K +V +++ Y +++++ L + +V+ S DEAF D+T + + Sbjct: 439 AKARCPHLMIV--PYDFDAYGEVADQFYGILHKYCSKVQALSCDEAFLDMTECLHD-NPE 495 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + ++IR + T + GI+ +A+LA +AK + + E+ ++ Sbjct: 496 EVTQKIRNEIFGTTKCSASAGISGNMLIARLATRSAKPNGQCF------ISSEKVDGYLN 549 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 L + + GIG +S KL + ++ L + + K F + + RG Sbjct: 550 TLSIKALPGIGHTVSDKLKSKEVEYCGQLRNIPKESLHKDFGKKIGDMLWNYCRGIDHS- 608 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS- 295 + E + + ++G R D + + + +L R I+ +KT Sbjct: 609 VVEAVQETKSVGAEVNWGVRFNDNKDAENFLVNLSKEVCLRLEGCGVQGRTITLKLKTRR 668 Query: 296 -------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 F S S+ + T + + A + + + G+ + Sbjct: 669 KGAGEPIKFMGCGDCETVSRSMTIAGATDNPVTLQRIAKQLFSSFCVDVKEVRGVGLKIS 728 Query: 349 DFF--------SQGVAQLNLFDDNAPRPGSEQLMTVM-------DTLNAKEGRGTLYFAG 393 QG + + + + + G G++ +G Sbjct: 729 RLEHADLARGAPQGNMLESWLASPSDKLKKHSTEKACLLKNRDDAATSERRGFGSIRPSG 788 Query: 394 QGIQQQ 399 G + Sbjct: 789 IGGTSR 794 >UniRef50_Q2FKS4 DNA-directed DNA polymerase n=1 Tax=Methanospirillum hungatei JF-1 RepID=Q2FKS4_METHJ Length = 368 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 88/368 (23%), Positives = 153/368 (41%), Gaps = 21/368 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D+++FYAS E PDL GKPVV+ G V + EA+A G+ P Sbjct: 17 IILHLDMDSFYASVEIRNNPDLSGKPVVIGADPMQGTGRGVVSTCSYEARAFGIHSAMPI 76 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + L + + YA +S +M L ++ +E SIDEA+ DL+ R+ Sbjct: 77 SQAYHLCPH--AIFIPPHMATYAQVSATIMQILRGIAGEIEQVSIDEAYLDLSCDRSYEL 134 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 I+ + + LT VG+A ++ AK+A+ K + + + + Sbjct: 135 AAHHAANIKQVIRNQVGLTCSVGLAPSRIYAKMASEQQKPDG------LTVVSPDTLESF 188 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + LPV + GIG++ ++ L G++T+ D+A DI+ ++ F R + RG+ Sbjct: 189 LKPLPVGKIPGIGKKSAQVLINAGLQTIGDIARCDIQTLQDMFGSHAVRLHQIARGQDRE 248 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 L E ++ I +F T + ++ + +L ++ Y R I I+ + Sbjct: 249 GLRESG-KRRSISREHTFLRDSTSPDEILGSLHTMILSLCHELEEQNIYSRTIGIRIRYT 307 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + SV L+ PT++ R I A +W + GV Sbjct: 308 GF------ITRTKSVTLMQPTREVRVIECAIDGLFTEMWDRS-PVRLIGVRFSGLIHPDP 360 Query: 356 AQLNLFDD 363 Q +L D Sbjct: 361 VQRSLSDF 368 >UniRef50_C0LIJ7 Putative DNA polymerase V subunit UmuC n=1 Tax=Acinetobacter sp. NFM2 RepID=C0LIJ7_9GAMM Length = 429 Score = 277 bits (707), Expect = 8e-73, Method: Composition-based stats. Identities = 148/418 (35%), Positives = 229/418 (54%), Gaps = 6/418 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +F D+N+ Y S E + P L GKP VVLS+NDG +IAR+AEAK L + MG P FK +D Sbjct: 5 VFIHVDINSAYCSMEAFWNPKLKGKPCVVLSSNDGTIIARSAEAKLLKIPMGAPLFKVQD 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRDLTD 118 + + V SSN+ LY +MS R L IYSIDE F + T D T+ Sbjct: 65 IINKHNVHVLSSNFALYGEMSRRFHGILSGFVDPSCYSIYSIDEGFIEFTQFTKNFDATE 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE--RQRKLM 176 REIR V + LT VG+ +T T +K+AN+ AKK G+ +L + Sbjct: 125 MAREIRHQVYKFIGLTTCVGVGRTLTESKMANNLAKKNPE-LNGICNLVTMSLVDVESYY 183 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 ++PVD++WG+GR+ +KKL+ MGI +VLDLA ++ +R+ FNV ++ T+ EL G+PC + Sbjct: 184 QSMPVDEIWGVGRKYAKKLNDMGILSVLDLATSNPNRMRELFNVNMQSTILELLGQPCFE 243 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 E KQ+I+ S+SFG++IT+ +++AI Y A +L +EHQ C + F++++P Sbjct: 244 FESSPKAKQQIVSSKSFGQKITELSILQEAISKYTHNAFNRLVAEHQLCGSLIVFLQSNP 303 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F ++PYY S + PT + ++ AAT +D +++ G ++K GVML + + Sbjct: 304 FDQSKPYYSKSLTYTFTQPTNNLMQLVKAATSLIDKLYKEGIEFKKCGVMLCELIKEEHR 363 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ-GIQQQWQMKRAMLSPRYTT 413 + L D + LMT + +K G+ + + W+ K S Y + Sbjct: 364 TIGLLTDVEQLEKEQALMTAFQNIQSKFGKAKIAAGSCNLKNRDWEPKSERQSRNYFS 421 >UniRef50_A5Z8E0 Putative uncharacterized protein n=10 Tax=Clostridiales RepID=A5Z8E0_9FIRM Length = 428 Score = 276 bits (706), Expect = 9e-73, Method: Composition-based stats. Identities = 83/433 (19%), Positives = 160/433 (36%), Gaps = 44/433 (10%) Query: 1 MFALCDVNAFYASCETVFRP----------DLWGKPVVVLS---NNDGCVIARNAEAKAL 47 + DVN+ Y S V D+ P ++ G V+A++ AK Sbjct: 3 IIFHIDVNSAYLSWTAVKLLKEATKDEKKIDIRNIPAIIGGDREKRHGIVLAKSISAKKF 62 Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 G+ G+P +V + Y + S+++M+ L +P +E S+DE + D Sbjct: 63 GIVTGEPIANALQKCPNILIV--PPEHGYYNEQSHKLMNLLRTFTPDIEQVSVDECYMDF 120 Query: 108 TGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL 166 +G++N +I+ TV ++ TV VGI+ K LAK+A+ K + T Sbjct: 121 SGIQNEYPSPLACAYKIKDTVKEKLGFTVNVGISDVKVLAKMASDFTKPDKVHT------ 174 Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 ++ M LPV++++ G+ L +GI + LA + + H + Sbjct: 175 LYRREIKEKMWQLPVEELYMAGKSSVNTLHKLGIYNIGQLATSPEYILEAHLKKHGKILW 234 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 G + + + S + + + + + + + + A +LR Q + Sbjct: 235 EYANGIDKSVVNTKREELKGVGNSITLPYDLDNMEEIEKILLQLSEKVAGRLRKGKQMAK 294 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA--GHRYQKAG 344 ++ +K + F S L T +I + +W+ + G Sbjct: 295 TVAVEVKYNDFIKA------SRQTTLDRCTDSGTEIYQLSKELFRELWEKDGNKSVRLLG 348 Query: 345 VMLGDFFSQGV-AQLNLFDDNAP-------------RPGSEQLMTVMDTLNAKEGRGTLY 390 + + QG Q+++ D A R ++L +D + K G + Sbjct: 349 IRTANLEEQGALEQMSIMDIMAQTTKKQQNATTNISREKMKKLDKALDAIKNKYGEDKIK 408 Query: 391 FAGQGIQQQWQMK 403 A +Q MK Sbjct: 409 RASLLAEQTVDMK 421 >UniRef50_B1KD33 DNA polymerase IV n=55 Tax=Proteobacteria RepID=DPO4_SHEWM Length = 364 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 63/351 (17%), Positives = 129/351 (36%), Gaps = 24/351 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ ++A+ E P+L GKP+ V G + N EA+A GV+ Sbjct: 8 IIHIDMDCYFAAVEMRDFPELRGKPIAVGGRSDRRGVISTCNYEARAFGVRSAMASGYAL 67 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L +V +Y ++S ++ + +E S+DEA+ D+T + C+ T Sbjct: 68 KLCPDLILV--PGRMSVYKEVSAQIRDIFARYTDLIEPLSLDEAYLDVTECKQCQGSATL 125 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + IR + + T LT GIA K LAK+A+ K + + + ++ Sbjct: 126 IAQAIRQEIFEVTGLTASAGIAPVKFLAKVASDLNKPNGQY------VITPDMISSFITT 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + G+G+ KKL+ +G+ T +L + + F + + +G + Sbjct: 180 LPLTKIPGVGKVTGKKLEDIGLTTCGELQAYPKSELIERFGKFGKILIERAQGIDERAIS 239 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS--EHQYCRFISTFIKTSP 296 ++ + + + I + ++ + + +K + Sbjct: 240 P-HRERKSVGVETTLAKDIYTLEQCHGVMPQLIQELGARMSRSAKGRSINKQVVKLKFND 298 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 F + + + +SL+ G + GV + Sbjct: 299 FKQTTIEHR--------SDEMSVKLFYELLAQSLERQQ--GRGIRLLGVSV 339 >UniRef50_B3WC63 DNA-damage-inducible protein P n=8 Tax=Lactobacillus RepID=B3WC63_LACCB Length = 367 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 70/364 (19%), Positives = 141/364 (38%), Gaps = 19/364 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND-----GCVIARNAEAKALGVKMGDPWF 56 D++AFYAS E P L K +V+ + G V N A+ GV P Sbjct: 16 IIHLDMDAFYASIEMRDNPQLRSKALVIARDPRTTGGKGVVTTANYVARRYGVHSAMPAN 75 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + L R +V S ++ Y +S ++ + +++ +E + DEA+ D+T + Sbjct: 76 EALQLVPRSKLVFKSPDFPKYKAVSAQIHALFHQVTDLIEPVAFDEAYLDVTANKMFPST 135 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 ++ + Q T LT +GI+ K +AK A+ K R L E+ + Sbjct: 136 IALALWLQDQISQATQLTSSIGISYNKFIAKQASDYNKPVGR------TLVLPEQALLFL 189 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LP+ G+G++ KL +G+ L + + F + + RG Sbjct: 190 DRLPIKQFRGVGKKTLPKLTDLGVTDGKSLRALSQDDLLRMFGKMGFVLYQHARGVDNRP 249 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + T + I R++G +TD +++ + + A L + + + + ++ Sbjct: 250 V--AVRTAKSIGKERTYGTPLTDAEAVQTQLHNLAGMVVTSLNQKAMHGKTVVLKVRDVD 307 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + + + + I +AA + ++ + + G+ + + Sbjct: 308 F------ITQTKRLTQDHYFEGEQAIFDAAWQLWGSVAMSNLAIRLLGITVTGLDPKQYE 361 Query: 357 QLNL 360 L+L Sbjct: 362 NLDL 365 >UniRef50_D2NU69 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Rothia mucilaginosa RepID=D2NU69_9MICC Length = 479 Score = 276 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 89/383 (23%), Positives = 160/383 (41%), Gaps = 25/383 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AF+ + E + P L G+P++V V + + EA+A GV+ G P + + Sbjct: 27 VIMHLDMDAFFVNVELLENPALRGEPIIVAPLGPRSVVCSASYEARAHGVRSGMPLSRAR 86 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTD 118 +L V+ + Y S VM+ L +LSP VE S+DEAF DLTG + +D Sbjct: 87 NLSPNATVLPLRGD---YRHYSRAVMAILNDLSPYVEQVSVDEAFVDLTGAYLHGQDPVA 143 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + R + Q L G+A K LAK+A+ +K + + ER ++ + Sbjct: 144 LAQSARDRIAQELSLPSSAGVAPNKLLAKMASTGSKPNG------LWVIPPERVQEFLDP 197 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQL 237 V ++WG+G + +++L GI T+ + + ++++ F E RG + Sbjct: 198 RKVSNLWGVGVKSTEQLSRYGIHTIAQMRSMSLDWLKERFGTAQGEHLWAMARGIDERPV 257 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F TD + AI + + ++LR+ + +S I+ S F Sbjct: 258 VTE-REEKSMGGEHTFETDTTDAQEVSAAIRELSLKLGKRLRAAGKLAGGLSLKIRYSTF 316 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA-----IWQAGHRYQKAGVMLGDFFS 352 + + ++ L P I + A +L A A + GV Sbjct: 317 ETH------TRAIALNVPVDSGMQIASLALEALRADEILVGQAAPRALRLIGVRAEKLAH 370 Query: 353 -QGVAQLNLFDDNAPRPGSEQLM 374 + Q LFD S + Sbjct: 371 AEDGVQQTLFDSIESGANSRSIQ 393 >UniRef50_C7H0B0 Putative DNA polymerase IV n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H0B0_9FIRM Length = 406 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 84/403 (20%), Positives = 171/403 (42%), Gaps = 24/403 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + CD+N+++ S E + P+L PV V N G ++A+N AK G+K G+ + Sbjct: 6 VILHCDMNSYFVSVELLKHPELKDLPVAVAGNPKNRHGIILAKNEIAKKYGIKTGETIWA 65 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-L 116 K+ + + S +Y+ Y S R+E +S+DE++ D+TG Sbjct: 66 AKNKCKDLEL--LSPHYDEYIKYHKLFNDIFYRYSDRIEKFSVDESWIDVTGSIKLFGTG 123 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + +IR V + +T+ G++ K AK+ + K + + + ++++ Sbjct: 124 KEIADKIRGEVREELGITLSAGVSFNKVFAKMGSEYKKPDAT------TVISRDNYKEVL 177 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV + + +G+ +K L++ GI T+ DLA + + ++ V + + G+ + Sbjct: 178 WPLPVSEFFMVGKITAKLLNSYGIYTIKDLAAAEPQILKAELGVKIYELIDSANGKSSDE 237 Query: 237 LEEFAPTKQ--EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 ++ + + I ++F E + +++ + + A++LRS + + + IK Sbjct: 238 VKYYKDNEDPMSIGHGKTFKEDLVTSTQVKKEVWGLSEMVAKRLRSHNLFAAGVKVVIKD 297 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA---GVMLGDFF 351 S F S KL PT + I A + A W + + G+ L Sbjct: 298 SDFK------SYSRQKKLRLPTDVTGHIAEEAFSLIKASWDFSKKLRAMSITGIDLRPDC 351 Query: 352 SQGVAQLNLFDD-NAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 +Q ++F ++ VMD + K G ++ + Sbjct: 352 KDIGSQYSIFSQGEQEGIKEREVDKVMDEIKQKFGDQSIGYGV 394 >UniRef50_B9YDA2 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YDA2_9FIRM Length = 469 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 92/415 (22%), Positives = 172/415 (41%), Gaps = 24/415 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFKQ 58 D+N YA E + P+L +P+ V + G ++A+N AK ++ G+ + Sbjct: 52 IVHSDINHCYAQIEEMLNPELKQRPMAVGGSQEERHGIILAKNLHAKKYKIQTGETLDEA 111 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-T 117 + + ++ +Y Y ++++V + E + RVE Y +DEA+ DLT + + Sbjct: 112 RIKCPQ--LLILPPDYRRYQRITDQVKAIYREYTDRVEEYGLDEAWLDLTQSQRLFGPAS 169 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 R I+ V LT+ +G++ K AK+A+ K ++ + Sbjct: 170 QIARTIQQRVYAELGLTISIGLSFNKIFAKMASDFVKPSG------FVTITRANFQEKIY 223 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V +++ +G KKL+A GI T+ DLA D +F+R++F V E GE ++ Sbjct: 224 PLSVRELFYVGAATQKKLEAWGITTIGDLASRDRQFMRRYFGKVGEMLHWFALGEDISEV 283 Query: 238 EEFAP--TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + + S + + + R + A A +LR + + I+ ++ Sbjct: 284 ALASEAIPVKSVGNSVTAVHDLHTHGEARLVLRVLAESVASRLRDQGLKGKGIALSLR-- 341 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF-SQG 354 + + S K PTQ + +I+ A L WQ + G+ + D Q Sbjct: 342 ----DIHLFRWSLQRKRARPTQLAEEILEDAEILLRQAWQNALPLRSIGISVFDLCLDQT 397 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ---WQMKRAM 406 QL+LF D R QL +D + + G + + + + K+ Sbjct: 398 GEQLDLFVDEQHRQSLLQLEKTVDGIRRRFGFEKIQRCSLLLDKPLTSFNPKQDQ 452 >UniRef50_UPI000050FCD1 DNA-directed DNA polymerase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FCD1 Length = 419 Score = 275 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 85/402 (21%), Positives = 168/402 (41%), Gaps = 19/402 (4%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D+++F+ S E + RP+L G+PV+V + G V++ + EA+ GV P + +L Sbjct: 26 LHLDMDSFFVSVELLSRPELVGRPVIVGGRSGRGVVVSASYEAREFGVHAAMPMGRAMNL 85 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDFG 120 V+ ++ LY+ S +V + +++P + S+DEA+ D++ Sbjct: 86 CPFAEVI--PPSHGLYSSYSQKVFDLVAQVTPDFQQVSVDEAYIDVSAAVRRLGSPVRIT 143 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++RA + +T L+ VGIA ++ +AKLA+ AK + L L R+ + +P Sbjct: 144 SQLRAEIEAQTGLSASVGIAGSRVVAKLASTRAKPHGQ------LLVPLSATREFLDPMP 197 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++ + G+G + + GI+ + DLA D + + F R G ++ Sbjct: 198 IEALPGVGEKTKEGFFRYGIRLIGDLAAVDEAWAGRVFGAHGHHLWRSAHGLDSHGMDRQ 257 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I +F E + D + + A + A ++R++ + + + + F Sbjct: 258 VKDR-SISAEHTFNEDVWDLSQLEHELLRLADKVAHRVRADGKVATTLGLKYRLADFT-- 314 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA-GHRYQKAGVMLGDFFSQGVAQLN 359 S S+ L PT +R+I A ++ + + + GV + Sbjct: 315 ----TLSRSITLDAPTDLAREIYEALRPAMRNLREQKSKGVRLLGVRAAGLMDFSASGRQ 370 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 + D A G E +D + K G + A ++ Sbjct: 371 VRLDEAEDSGREA-EVALDDVRKKFGTAAISQASLLRKRPEH 411 >UniRef50_A1WY69 DNA polymerase IV n=47 Tax=Bacteria RepID=DPO4_HALHL Length = 356 Score = 275 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 81/364 (22%), Positives = 143/364 (39%), Gaps = 19/364 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYAS E P L G+PVVV + G V A + EA+A G++ P + Sbjct: 6 IIHIDMDAFYASVEQRDDPSLRGQPVVVGGSPEGRGVVAAASYEARAFGIRSAQPAAWAR 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 + ++ Y +S ++ + + +E S+DEA+ D+TG + R T Sbjct: 66 RRCPE--AIFLRPRFDRYRAISRQIHGIFADFATTIEPLSLDEAYLDVTGSQRFRGSATH 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + IR + + T LT G++ K LAKLA+ K + E ++A Sbjct: 124 MAQAIRRRIREETGLTASAGVSYNKLLAKLASDEGKPDGLY------VVPPEDGPAYVAA 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ + G+G + +L+ +GI+ V DL D ++ + RG + Sbjct: 178 QPIRRLHGVGPATAARLERLGIRQVGDLLDWELADLHVFLGNRAGTLHDAARGIDHRPVR 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ I R+FG+ D + Q + + A +L R ++ ++ + F Sbjct: 238 PRRS-RKSIGAERTFGDDTRDLGEIHQRLAPLITKVATRLEHHELVARTVTLKLRYADFE 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + V P + DI L + GV L + + Sbjct: 297 ------SITRRVSPPGPVAQAADIEALIPALLAETEAGSRPVRLLGVSLSGLQPK-QREQ 349 Query: 359 NLFD 362 +LF Sbjct: 350 DLFS 353 >UniRef50_B3E013 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E013_METI4 Length = 365 Score = 275 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 80/354 (22%), Positives = 145/354 (40%), Gaps = 21/354 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 +F D++AFY S E + P+ P+ V + + G ++ + EA+ GVK G P + Sbjct: 26 LFFFVDLDAFYVSVERLRHPEYREMPMAVYTGSLNGRGVIMTASYEARKYGVKSGMPIRQ 85 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 +V ++ LY + SN V S L+ S R+E SIDE + D Sbjct: 86 ALYHCPGIMLVA--AHPSLYEEYSNSVYSLLKRFSERIERVSIDENCLVVPSS---IDPE 140 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 I+A + + L +G+ K +AK+A AK + + ++ ++ Sbjct: 141 TTATAIQAAIGAKIGLPSSIGVGSNKLIAKMACDLAKPQGIR------VIPPGYEKAFLA 194 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LPV+ + G+G K AMGI T+ DL+ D + +R+ F +G L Sbjct: 195 PLPVEKIPGVGPATLKIFHAMGIVTIDDLSKVDEQTLREKFGKRGAYFYNAAQGIDKSPL 254 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + + +F I ++ +++ + S + A+ LR E + + ++ S F Sbjct: 255 QLERTPR-SLSREITFDRDIKNFSILQRVLVSLSRDLADSLRKEKLVAKTVFLKLRYSDF 313 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + N L +PT D +I L + + G+ L + Sbjct: 314 STNL------RQFSLSSPTDDPTEIATCGLLLLKRNIKKEKALRLIGLGLRNLT 361 >UniRef50_Q5WYY8 DNA polymerase IV n=64 Tax=Bacteria RepID=DPO4_LEGPL Length = 355 Score = 275 bits (702), Expect = 3e-72, Method: Composition-based stats. Identities = 77/364 (21%), Positives = 142/364 (39%), Gaps = 25/364 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FYA+ E P+L KP+ V + G + N A+ G++ P Sbjct: 7 IIHIDMDCFYAAIEMRDFPELANKPIAVGGDAKHRGVIATCNYAARQFGIRSAMPTAHAL 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L R ++ ++Y S + S L E + +E S+DEA+ D+T C+ T Sbjct: 67 KLCRE--LILRPVRMDVYQKESQYIRSLLTEYTDLIEPLSLDEAYLDVTESTQCQGSATW 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EIRA + Q LT GIA K+LAK+A+ K + + E + Sbjct: 125 IAEEIRARIYQTRQLTASAGIAPNKSLAKIASDWHKPNGQ------MVIRPEDVSAFVLD 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV ++G+G ++ +KL A+ IKT DL I ++ + F + +R RG + Sbjct: 179 LPVRKLFGVGPKMEEKLGALNIKTCADLQRYSIEYLLQKFGTMGQRLYELARGIDNRPVN 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ--YCRFISTFIKTSP 296 ++ I ++ + + + + + AR +++ + + +K + Sbjct: 239 PE-RIRKSISVEETYPKDLPNSEACLAVLPDLMARLEARIQRAGKISGIHNLFVKLKFND 297 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + D D+I + + G + G+ + Sbjct: 298 F-----------QQTTIERVMDKIDLIVLRQLIQEGFARRGMPVRLLGIGIKLKQENTYQ 346 Query: 357 QLNL 360 + L Sbjct: 347 SVQL 350 >UniRef50_A8RBK8 Putative uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=A8RBK8_9FIRM Length = 389 Score = 274 bits (701), Expect = 4e-72, Method: Composition-based stats. Identities = 85/401 (21%), Positives = 161/401 (40%), Gaps = 19/401 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 + D+N+F+AS E + L G+PVVV + V + EA+ GV P Sbjct: 5 VIFHIDLNSFFASAEVLKNSALEGQPVVVAGMHRRSVVSTASYEARNYGVHSAMPLHMAL 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 + + +V +Y Y ++S R + ++ SP +E SIDE + D+T + D Sbjct: 65 EKCPQ--LVVVQGDYAWYEELSRRFFNYVKRFSPYLEPASIDECYIDVTEAIRAYKRPLD 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+ V + L +G+ +K LAK+A+ K + + + + Sbjct: 123 LAWRIQKGVYEDLRLPCSIGVGPSKFLAKMASDMRKPMGI------TVLRRQEIERKLWP 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLAD-TDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L + D++GIG++ L+ GI T+ D A+ + I + ++ RG +L Sbjct: 177 LSIADMFGIGKKTVPLLERQGIYTIGDFANPANEAKIMALMGKHAYQLIQNARGFGSNRL 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + Q I S + I +Y ++ A + +++ + E IS I+ + F Sbjct: 237 -DYNTSVQSISQSTTLDTNIVEYEEVKSVFKRLANKLSQRAKQEDLRGALISISIRYADF 295 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 S + T D+ ++ A D G + G+ LG FS+ Sbjct: 296 TNAV------RSTTISEYTNDADVLLEHALLLFDQHNN-GKEIRHLGIGLGSLFSKTRTV 348 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + + ++ LN + G L A + +++ Sbjct: 349 DQINLFQDVKAEPTDSTDILKQLNKQLSTGKLMKASELLKK 389 >UniRef50_D0LIK9 DNA-directed DNA polymerase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIK9_HALO1 Length = 409 Score = 274 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 101/401 (25%), Positives = 151/401 (37%), Gaps = 24/401 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E P L GKPV+V + G V A + EA+ GV P Sbjct: 8 VLHVDLDAFFASVEQRDDPSLRGKPVLVGGSAERGVVAAASYEARRYGVHSAMPMAVALR 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDF 119 + VV S YA+ S + L+ SP VE S+DEAF DLTG D Sbjct: 68 RCPQAVVVRHS--MGRYAEASRAFFAILDHFSPLVEPLSLDEAFLDLTGSERLLGDARTV 125 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + I+ V L V VG+A TK LAK+A+ K + + +R + L Sbjct: 126 AQTIKDRVRAELSLVVSVGVASTKFLAKIASDIDKPDG------LCVVEPDRVESFLHPL 179 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 PV +WG+G KL MG++T+ D+A + + G +E Sbjct: 180 PVSRLWGVGAVTQDKLHQMGLRTIGDVARYPSSVLSARLGKSMGAHLSALASGYDPRPVE 239 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 I +F + + + A R A +LR R + IK + F Sbjct: 240 RPGKP-VSIGHEETFEVDLGRKSDIAAVLLGQADRVAARLRRADLRARVVQLKIKYADFR 298 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-----AGHRYQKAGVMLGDFFSQ 353 L + L T D I A L + + + GV L + Sbjct: 299 L------LTRRRSLADATVDGGVIGAVAVAMLGELEVAENRGKAYAVRLCGVSLSGLEDR 352 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 + + + EQL +D ++A+ G G + A Sbjct: 353 EGPRQLTLGEP-RQQQGEQLGDALDRIHARFGEGVVKRAVL 392 >UniRef50_C5RD20 DNA-directed DNA polymerase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RD20_WEIPA Length = 372 Score = 274 bits (700), Expect = 5e-72, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 148/365 (40%), Gaps = 20/365 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-----NNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYA E P+ P+++ + G V N A+ LGV Sbjct: 18 ILHIDMDAFYAQIEMRDNPEYKSIPLILANDPRKTGGRGVVATANYLARNLGVHSAMSAA 77 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRD 115 + L + V + N+ Y +S ++ + + +VE + DEA+ D+T + N + Sbjct: 78 EALKLAPQ--AVFVTPNFSKYRGVSQQLHQIFKRYTNKVEPVAFDEAYLDVTENIPNINN 135 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 E++ + + LT VGI+ K LAKLA+ K + + N E R Sbjct: 136 AIQLAHELQQIIYEELELTSSVGISFNKFLAKLASEHNKPSG------LTIINPEDIRSF 189 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + LP++++ G+G + ++K+ ++GI+ DL DT + F +RG Sbjct: 190 LDTLPINEMRGVGAKTAEKMISLGIRNGKDLYDTPQNKLADEFGKSGYIFYERIRGVDDR 249 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + ++ + R++G + ++ + AA+ L + + + I+ + Sbjct: 250 PVVWQ-RERKSMSKERTYGPFLDTEQAIMDELKDLAAKLTASLIKSQLHGKTLVLKIRDN 308 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + +L D +I +AA LD + H + G+ + + + Sbjct: 309 EFQTA-----THRATRLDFFPNDEDEIYHAAQDILDELGGYHHAIRLLGLTMTNLAALSF 363 Query: 356 AQLNL 360 + L Sbjct: 364 ENVVL 368 >UniRef50_B0BPX9 DNA polymerase IV n=222 Tax=cellular organisms RepID=DPO4_ACTPJ Length = 356 Score = 273 bits (698), Expect = 8e-72, Method: Composition-based stats. Identities = 81/371 (21%), Positives = 137/371 (36%), Gaps = 31/371 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FYA+ E P L GKPV V + G + N EA+ G+ P + Sbjct: 7 IIHIDMDCFYAAIEMRENPALIGKPVAVGGSVEGRGVLTTCNYEARKFGLHSAMPTAQAL 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 +V N LY +S ++ + VE S+DEA+ D+T R C T Sbjct: 67 KRCPNLILV--PVNMPLYKAVSEQIHQIFRRYTDIVEPLSLDEAYLDVTDCRQCSGSATW 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +EIR + HLT GIA K LAK+ + K + + + E + Sbjct: 125 IAQEIRDAIWNELHLTASAGIAPLKFLAKIVSDQNKPNGQF------VISPENMTAFIYD 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + G+G+ ++KL +G+ T D+ +D FI K F +R ++ Sbjct: 179 LPLKKIPGVGKVTNEKLAQLGLHTCGDIQHSDKAFIYKTFGKFGQRLWEFSHAIDNRKI- 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH-----QYCRFISTFIK 293 E ++ + + I Q + + +L+ Q + ++ +K Sbjct: 238 EANRPRKSLAVENTLPTDIWHLAEAEQIVDELFKKLVFRLQRNWGERSLQEFKKLAIKLK 297 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA--GHRYQKAGVMLGDFF 351 F L T L +WQ + G+ + Sbjct: 298 FGDFT----------QTTLERTTDGLSR--ERFIELLQQVWQRTNRRSVRLIGLSVHYPT 345 Query: 352 SQGVAQLNLFD 362 + QLNL++ Sbjct: 346 EKVKKQLNLWE 356 >UniRef50_D2A3T9 Putative uncharacterized protein GLEAN_14950 n=1 Tax=Tribolium castaneum RepID=D2A3T9_TRICA Length = 825 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 69/440 (15%), Positives = 138/440 (31%), Gaps = 59/440 (13%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------ 36 + D++ F+ S RP+L G PV V Sbjct: 209 VVMHIDMDCFFVSVGLRTRPELRGLPVAVTHARRAQLNPNKEREETVTLNMDRMPEGVEL 268 Query: 37 -----------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 V + + EA+ GVK G L + + ++E Y ++S + Sbjct: 269 RMIDGRSSMSEVASCSYEARKCGVKNGMFLGAAAKLCPQIKTI--PYDFEGYKEVSMVLY 326 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDL--TDFGREIRATVLQRTHLTVGVGIAQTK 143 TL + +E S DE + +++ + DL D+ IR + T G + Sbjct: 327 KTLASYTLNIEAVSCDEMYVEVSDLLKSYDLSVEDWANHIRDEIKTATGCPCSTGFGSNR 386 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 A+LA AK E ++ + + D+ G+G KL ++G++T Sbjct: 387 LQARLATKKAKPDGSYY------LKPEDVESYLAEIALADLPGVGYATLSKLKSLGLETC 440 Query: 204 LDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 D+ + +++ + E + + +G L + ++ + ++G R Sbjct: 441 GDVQVASLGVLQRELGAKMGETLLEQAKGIDRKPLN-YTHERKSVSAEINYGIRFKTINE 499 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLL 313 + S +L + ++ + T+ F + S S L Sbjct: 500 CYNFLESLGNEVWSRLNEIKMRAKTVTLKLMIRAADAPLETAKFLGHGLCDSVSKSQTLA 559 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 D + + D + + GV L L + ++ Sbjct: 560 HHISDVKILHREVRTLYDKMNVNYAELRGLGVQLTKLEKLAPINPTLSNFLQQESK--KI 617 Query: 374 MTVMDTLNAKEGRGTLYFAG 393 D ++ GR + Sbjct: 618 QPTGDKTASR-GRELVRPPS 636 >UniRef50_Q2IM85 DNA-directed DNA polymerase n=7 Tax=Myxococcales RepID=Q2IM85_ANADE Length = 418 Score = 273 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 97/410 (23%), Positives = 158/410 (38%), Gaps = 25/410 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E + P+L G+PV+V N G V A + EA+ GV+ P + + Sbjct: 13 ILHLDLDAFYASVEQLDHPELRGRPVIVGGTGNRGVVCAASYEARRFGVRSALPTARARR 72 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDF 119 L V + Y+++S RV +P VE S+DEAF D+T R D Sbjct: 73 LCPDG--VFLPPRFGRYSELSRRVFDVYRRYTPLVEPLSLDEAFLDVTASRALHGGGPDI 130 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R I+A V L V G+A K AK+A K + + ++ L Sbjct: 131 ARAIKAAVRGECGLAVSAGVADVKMAAKIATDLGKPDG------LVVVPPGGVAAFLAPL 184 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLE 238 PV +WG+G L +G+ T+ DLA + R GE ++ Sbjct: 185 PVGRLWGVGEVTEAALRRIGVATIGDLARMPESALAAALGPTHARGLRALACGEDPREVV 244 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + +F + + P++ + + + A A +LR+ ++ +K + F Sbjct: 245 P-DEEAKSVGAEDTFDQDLLGRPALERELLAQAGTVARRLRAAGLAGHVVTLKVKYADFT 303 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 L + V L T D R I +AA L + + G+ + F Sbjct: 304 L------VTRRVTLERATDDDRAIFDAACAQLARV-DLRRPVRLTGISVSGFAGDEERGQ 356 Query: 359 -NLFDDNAPRP-----GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 LF P + L +D L + G G + A + + Sbjct: 357 LGLFGGAPAPPPPEASRRKALNAALDALAGRFGEGAVTRADLAGRPPRRR 406 >UniRef50_C2FXW7 Possible DNA-directed DNA polymerase n=2 Tax=Sphingobacterium spiritivorum RepID=C2FXW7_9SPHI Length = 393 Score = 272 bits (696), Expect = 1e-71, Method: Composition-based stats. Identities = 79/403 (19%), Positives = 157/403 (38%), Gaps = 21/403 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D++ F+ S E + GKP++V ++ V A + E + GV P Sbjct: 10 VAHLDLDTFFVSVERLKNTQFVGKPLIVGGMSDRAVVSACSYETRLYGVHSAMPMKLALR 69 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + V+ + + Y+ S V + E P +E SIDE + DLTGV + F Sbjct: 70 LCPQAIVI--RGDMDSYSYYSRMVTDVVREYVPVMEKASIDEFYADLTGVDRFFGCSQFM 127 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 E++ V + L + +A K ++K+A AK ++ ++ ++ L Sbjct: 128 AELKQKVRKEVGLPISYALASNKLISKVATEDAKPDGKRE------VEHGLEKDYLAPLR 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 ++ + GIG + S L MG++T+ L++ + ++ R+ G + + Sbjct: 182 IERMPGIGNKTSGLLHQMGVRTIKVLSEIPVPMMQNLLGKNGVDLSRKANGIDFTPIVPY 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + ++ I +F + D ++ + R +LR + I+ ++ S F Sbjct: 242 S-EQKSIGTEETFEQDTIDIYYLKSELIRMTERMTFQLRQHRRLTGCITIKLRYSNFD-- 298 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 S + + T +++ A ++ + GV QG Q++L Sbjct: 299 ----TVSKQMVIP-YTASDAVLLSKAKELFAKLYDKRLLVRLLGVRFSHLV-QGQYQIDL 352 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 F+D L MD + + G + A + + + Sbjct: 353 FEDTVESVR---LYQAMDYIRQRYGDAVVKRAISVPKPPEKER 392 >UniRef50_A8YTI5 DNA-damage-inducible protein n=29 Tax=Lactobacillus RepID=A8YTI5_LACH4 Length = 406 Score = 272 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 75/369 (20%), Positives = 145/369 (39%), Gaps = 20/369 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND-----GCVIARNAEAKALGVKMGDPWF 56 D++AFYAS ET P+L K +V+ + G V N A+ GV P Sbjct: 49 IIHLDMDAFYASVETQRNPELKNKALVIGQDPRNNGGHGVVATCNYVARKYGVHSAMPAI 108 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD- 115 K L + +V +++ Y +S ++ S + E++ +VE ++DEA+ D+T + ++ Sbjct: 109 KAVKLIPKSELVFVRPDFKKYRSVSAKIHSFMHEITDKVESIALDEAYLDVTHNKLGQNL 168 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 ++ + L G++ K LAK+ + AK + R + ++ Sbjct: 169 AVQVAIGLQRRIRTELGLNSSFGVSYNKFLAKMGSEYAKPFGR------TVILPYEAKQF 222 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + ++ G+G + ++L MGI T DL + K F + + G Sbjct: 223 LGMQKIEKFPGVGPKTQEQLHEMGIYTGADLQKVADFVLIKKFKKMGYFLAQHAHGIDLR 282 Query: 236 QL-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + ++ I R++ I I Y ++L+ + + + + ++ Sbjct: 283 PVIADSDTNRKSIGMERTYEPAIYTRDEALTHIRHYCKHLEDELKKRNFFAQTVVIKVRD 342 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI-WQAGHRYQKAGVMLGDFFSQ 353 + F + KL P+ D ++A D + GV + DF Sbjct: 343 NDFD------TVTKRRKLTKPSNSQYDYYDSARELFDKTSNFLEKGIRLIGVTVTDFKKD 396 Query: 354 GVAQLNLFD 362 +NLFD Sbjct: 397 EYQTINLFD 405 >UniRef50_A3EWL3 Polymerase ATREV1-1105 n=8 Tax=rosids RepID=A3EWL3_ARATH Length = 1105 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 73/375 (19%), Positives = 137/375 (36%), Gaps = 27/375 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALGVKMGDPWFK 57 D++ F+ S R +L KPV V +++ + + N A+A GVK G Sbjct: 375 IIHIDLDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYGVKAGMFVRH 434 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 KDL + +V N+E Y +++++ L +V+ S DEAF D++ + + Sbjct: 435 AKDLCPQ--LVIVPYNFEAYEEVADQFYDILHRHCRKVQALSCDEAFLDVSDLSDVET-E 491 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 IR +L+ T + GI T +A+LA AK + + E+ + + Sbjct: 492 VLASTIRNEILETTGCSASAGIGGTMLMARLATRVAKPAGQLY------ISAEKVEEFLD 545 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 LPV + G+G + +KL I+T L ++K F E RG Sbjct: 546 QLPVGTLPGVGSVLKEKLVKQNIQTCGQLRLISKDSLQKDFGVKTGEMLWSYSRGLDLRS 605 Query: 237 LEEFAPTKQEIICSRSFGERITDYPS----MRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + + I ++G R D ++ + + +L+ R + I Sbjct: 606 V-TAVQESKSIGAEVNWGVRFRDQQDVFILVQHFLQCLCKEVSLRLQGCEMIGRTFTLKI 664 Query: 293 K--------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 K + + S S+ + T D + + + + + G Sbjct: 665 KKRKKDAEEPTKYMGCGDCDNLSRSITVPAATDDIEVLQRISKKLFGSFCLDVKEVRGVG 724 Query: 345 VMLGDFFSQGVAQLN 359 + + S + Sbjct: 725 LQVSKLDSADPSNKG 739 >UniRef50_B2A4V8 DNA-directed DNA polymerase n=5 Tax=Clostridia RepID=B2A4V8_NATTJ Length = 421 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 103/407 (25%), Positives = 161/407 (39%), Gaps = 26/407 (6%) Query: 1 MFALCDVNAFYASCETVFRP------DLWGKPVVVLS---NNDGCVIARNAEAK-ALGVK 50 + DVN+ Y S E +R DL P VV G V+A++ AK ++ Sbjct: 5 IIFHIDVNSAYLSWEAAYRLQKGAQLDLRQVPSVVGGDSQKRRGIVLAKSIPAKSKFKIQ 64 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+ + VV NY+LY SN ++ L E SP ++ YS+DE F D T + Sbjct: 65 TGELLSSARKKCPDLFVV--PPNYDLYLRCSNAMVELLYEYSPFIQRYSVDEVFLDFTNM 122 Query: 111 RNCRDLT-DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 I+A V + TV +GI K LAKLA+ K + T Sbjct: 123 EKQFGDYLTAANTIKARVKEELGFTVNIGIGPNKLLAKLASEFKKPDRVHT------LFP 176 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 E + LPV +++ +GR KKL GI T+ +LA T ++ Sbjct: 177 EEIPTKLWPLPVGELFMVGRATEKKLLDRGITTIGELAKTPRNKLKLWLKSHGLLIWDFA 236 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G + + + S + E + D + R + S + + +LR H Y + ++ Sbjct: 237 NGIEESSVRPEGFPMKGLGNSTTTPENVADKETARLWLLSLTEKVSSRLRDAHCYAQVVN 296 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 IKTS F KLL PT ++ I + L+ +W + G+ L Sbjct: 297 LSIKTSQF------ISYGKQKKLLNPTNSTKVIFETGKKLLNELWDEEEPLRHIGISLSS 350 Query: 350 FFSQGVAQLNLFDDNAPRPG-SEQLMTVMDTLNAKEGRGTLYFAGQG 395 S QL++FD + E +D + AK G +L + Sbjct: 351 LSSSKSYQLSMFDKLSIDTDSEESFYKAIDKIRAKHGETSLIRSCFL 397 >UniRef50_B0TQD1 DNA polymerase IV n=7 Tax=Bacteria RepID=DPO4_SHEHH Length = 358 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 71/352 (20%), Positives = 131/352 (37%), Gaps = 26/352 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FYA+ E P+L GKP+ V G + N EA+ GV+ Sbjct: 4 IIHVDMDCFYAAVEMRDFPELRGKPIAVGGRSDRRGVISTCNYEARQFGVRSAMASGYAL 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L +V ++Y ++SN++ + E + +E S+DEA+ D+T +C+ T Sbjct: 64 KLCPDLILV--PGRMQVYKEVSNQIRAVFERYTDLIEPLSLDEAYLDVTESSHCKGSATL 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 IRA +L T LT GIA K LAK+A+ K + + E + + Sbjct: 122 MAEAIRAEILAETGLTASAGIAPVKFLAKIASDLNKPNGQY------VIRPEMIEEFVKT 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + G+G+ +KKL +G+ T D+ + + F + +G + Sbjct: 176 LPLIKIPGVGKVTAKKLADLGLHTCSDIQAYPEPKLVERFGKFGSVLIERSKGIDKRAIL 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS--EHQYCRFISTFIKTSP 296 ++ + + + I R + ++ + + +K Sbjct: 236 P-NRERKSVGVETTLAKDIHTLEQCRAVMPQLIQELGARVSRSAKDRAINKQVVKLKFED 294 Query: 297 FALNEPYYG-NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 F + + SV L ++ A + GV + Sbjct: 295 FKQTTIEHRSDEISVNLFYQ------LLEQAMERQHE-----RGIRLLGVSV 335 >UniRef50_C5NXH9 DNA polymerase IV 1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXH9_9BACL Length = 402 Score = 271 bits (692), Expect = 4e-71, Method: Composition-based stats. Identities = 78/374 (20%), Positives = 152/374 (40%), Gaps = 21/374 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + A D+N FYAS E + P+L GKP+ + G ++ N EA+ LG+K Sbjct: 4 VIAHIDMNCFYASVEEKYNPELKGKPLAIAGEVKTRHGIIVTSNYEARELGIKTTMRVGD 63 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 + ++ + + Y S + + E + ++EI S+DEA+ DL+ Sbjct: 64 ARKIYP--NIKILRPDMPKYQQESKLIFDLVREYTDKIEIVSVDEAYIDLSDFSE---PI 118 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 I+ + ++ + VG++ K AK+ ++ K + N + + ++ Sbjct: 119 KVIATIQRRIYKQLGMPSSVGVSFNKFFAKMGSNLKKPLG------FSIINKKNYKDILW 172 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L + ++ G G +KKL +GI T+ D+A + + V R + GE +L Sbjct: 173 NLDIGEMHGCGNASTKKLKKIGINTIGDIAVANEVILHSLLGVQGLRLKNKANGEGNSEL 232 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + ++ I S++F + D + + I + + + +++S IS ++ S F Sbjct: 233 KYTVD-RKSIGNSKTFTNDLIDEDDILKEIKKLSEKVSSRVKSRSYVGNNISIMVRFSDF 291 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S K+ D+ DI N A L + + GV L + + Sbjct: 292 K------TITRSKKIPEFICDTNDIFNYAWELLLEHYDFTKGIRLLGVSLNEIKKVKGLK 345 Query: 358 LNLFDDNAPRPGSE 371 + L + E Sbjct: 346 VQLDIFDKKDYKEE 359 >UniRef50_A1KUQ3 DNA polymerase IV n=34 Tax=Proteobacteria RepID=DPO4_NEIMF Length = 352 Score = 270 bits (691), Expect = 5e-71, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 148/362 (40%), Gaps = 19/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E +P L G+PVVV + A + EA+ G+ K Sbjct: 6 IIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICAASYEARQFGLHSAMSVATAKR 65 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L + V +++LY +S ++ + + +E S+DEA+ D+T +N ++ Sbjct: 66 LCPQ--AVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLSLDEAYLDVTRNFKNIPYASEV 123 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +EIRA + T LT GIA K LAK+A+ K + + + + L Sbjct: 124 AKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPNGQF------VLPPHKVMAFLETL 177 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G+ KK+ ++G++T DL + + HF R +RG ++ Sbjct: 178 PLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGRYGYRLYDLVRGTDERPVK- 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + +I + E + + A ++ ++ + ++ +KT F + Sbjct: 237 AERERLQISTEITLPEDLP-LEQAAGHLPHLAEDLWRQITRKNVEAQSVTLKLKTYDFRI 295 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR-YQKAGVMLGDFFSQGVAQL 358 + ++ + D ++ AA + + ++ G+ +G + Q Sbjct: 296 ------ITRTLTYSSVLPDCAALLQAAQMLIARVPPQTEDAFRLIGIGVGHLVPKNQQQD 349 Query: 359 NL 360 Sbjct: 350 LW 351 >UniRef50_B5Y6A2 DNA-directed DNA polymerase n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6A2_COPPD Length = 390 Score = 270 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 90/405 (22%), Positives = 147/405 (36%), Gaps = 30/405 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL------SNNDGCVIARNAEAKALGVKMGDPW 55 D++AF+ASCE P L GKP+ V+ + A + EAK GVK G P Sbjct: 4 IMHVDMDAFFASCEQAINPKLKGKPIGVMADPYGRGKKRSVIAAASYEAKRKGVKAGMPP 63 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + +L +V ++ Y + N+++ +S VE YSIDE F G +D Sbjct: 64 KEAFNLCPDLILVQAHPSF--YGYVHNQMLKYARSISSEVENYSIDEFFMTYYG----KD 117 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 G EIR V ++ +T VGIA K LAK+A K + + + Sbjct: 118 PDKVGEEIRRYVKKQFGITCSVGIAPGKILAKMATEEGKPDG------LTWWKPQAIPSV 171 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 LPV + GIG R L+ GI T+ DLA T I+ ++ E + +G Sbjct: 172 YKYLPVSAIPGIGSRREALLNKNGIYTLEDLALTPKPIIKNLMGILGEYYQKIAQGIDET 231 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 L + I S + + + L + + + F++ Sbjct: 232 PLITQESPLKSITRSVTLDASTLSPLVVEAVGRLLCDSLGKGLEEINSRAKELFIFLRYD 291 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + KL T D I + + + GV + D Sbjct: 292 DMSAESTGM------KLEFYTNDPDVIFHNFKMLNKELRPYKQGVRLVGVGMTDIR--QH 343 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW 400 +LF L V++ + + G ++ A + + + Sbjct: 344 YTPSLFYQ----EKPNPLKPVVEKIRQRYGYDSIIPANLLLAEPY 384 >UniRef50_C1F962 Putative DNA polymerase IV n=2 Tax=Bacteria RepID=C1F962_ACIC5 Length = 374 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 81/357 (22%), Positives = 138/357 (38%), Gaps = 19/357 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P+L GKPVVV V A + EA+ GV+ P + Sbjct: 16 IVHVDMDAFYASVEQRDAPELRGKPVVVAWRGRRSVVCAASYEARQFGVRSAMPAVTAER 75 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDF 119 L + + ++ Y +S V E + +E S+DEA+ D+T + T Sbjct: 76 LCPQ--AIFVPPDFTRYKAVSRAVREIFERHTDLIEPLSLDEAYLDVTHNKTGLPTATKV 133 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IR + + LT G+A K LAK+A+ K + + + + L Sbjct: 134 AITIRRQIREELSLTASAGVAPNKFLAKIASDWRKPDG------LFVIQPQDLATFLPPL 187 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V + G+G+ ++L +GI+T DL D+ + +F R RG + Sbjct: 188 AVGRIPGVGKVTEERLARLGIRTAGDLQHYDLATLESNFGRYGLRLYHLARGVDHSPVTP 247 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + +F I + I + + R E + R + +KT F + Sbjct: 248 -NRPTKSVSAEDTFEADIP-LSATEPVIRRLSEKVWNASRREARIARTVVLKLKTGDFHI 305 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQGV 355 + + S+ TP ++ A + + A Y+ GV L +F Sbjct: 306 H------TRSLTPETPPASCEELTAIALSLRERVDLGADRLYRLIGVGLSNFRDPEP 356 >UniRef50_UPI00016E76F4 UPI00016E76F4 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E76F4 Length = 1200 Score = 270 bits (689), Expect = 8e-71, Method: Composition-based stats. Identities = 78/439 (17%), Positives = 145/439 (33%), Gaps = 76/439 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S RPDL GKPV V SN Sbjct: 408 IFHVDMDCFFVSVAIRNRPDLKGKPVAVTSNRGAGKVLHRPGANPQLERHYYQWKQSHTK 467 Query: 37 ----------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVV 68 + + + EA+ GV+ G + K K L V Sbjct: 468 SGETPSQESPESNTSGAGQETAALSMAEIASCSYEARQAGVRNGMFFGKAKQLCPSLQAV 527 Query: 69 CFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLTDFGREIRAT 126 ++E Y +++ + TL + +E S DE D + + C + + IRA Sbjct: 528 --PYDFEAYKEVALTMYETLAGYTHDIEALSCDELLIDSSALLAELCISPEELAKAIRAD 585 Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 + ++T VG+ LA+LA AK + E + LPV + G Sbjct: 586 IKEKTGCCASVGMGSNILLARLATRKAKPDGQHF------LRSEDVDDFIRDLPVTSLPG 639 Query: 187 IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQ 245 +G +S+KL AMG+++ DL + ++K F + R RG + + ++ Sbjct: 640 VGPVMSRKLVAMGVRSCGDLQQVSLSQLQKKFGPRTGQTLFRFCRGLDDRPV-RYEKERK 698 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSP 296 + ++ R T + + + ++L+ R ++ + + Sbjct: 699 SVSADMNYNIRFTTVNEAECFLTNLSMEVQKRLQEAGLRGRRVTLKVMVRKVGAPQEPAK 758 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + + + +V L T I +A + A+ + G+ + G A Sbjct: 759 YGGHGICDNLARTVMLAQSTDHGEVIASAVIKLFHAMNLQVQDLRGVGIQVQLL--DGNA 816 Query: 357 QLNLFDDNAPRPGSEQLMT 375 + L Sbjct: 817 HQDSVGPRKRSIKEMLLDQ 835 >UniRef50_Q2P7M9 DNA polymerase IV n=22 Tax=Proteobacteria RepID=DPO4_XANOM Length = 359 Score = 270 bits (689), Expect = 9e-71, Method: Composition-based stats. Identities = 92/372 (24%), Positives = 147/372 (39%), Gaps = 21/372 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P L GKPVVV V A + EA+ G++ P + + Sbjct: 4 IVHVDMDAFYASVEQRDDPGLRGKPVVVAWRGARSVVCAASYEARTFGIRSAMPAVRAER 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDF 119 L + ++ Y +S +V + VE S+DEA+ D+T + + T+ Sbjct: 64 LCP--NAIFVPPDFVRYKAVSRQVREIFHRHTDLVEPLSLDEAYLDVTQAKTGMQLATEI 121 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + IR + + T LT GIA K LAK+A+ K + + R + L Sbjct: 122 AQLIRTQIREETELTASAGIAPNKFLAKIASDWRKPDGQF------VIAPSRIDAFLLPL 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V+ + G+G+ + KL A+GI TV DL + ++ HF + R RG +E Sbjct: 176 KVNRIPGVGKVMDGKLAALGIVTVADLRLRPLEELQAHFGSFGQSLYRRARGIDERPVEP 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 Q + +F E + ++ I A + R + R + +KTS F + Sbjct: 236 DQDV-QSVSSEDTFSEDLA-LDALDTHILRLAEKTWLATRRTERIGRTVVLKLKTSNFRI 293 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDF--FSQGVA 356 + S P + A + RY+ GV L F +G Sbjct: 294 ------LTRSCTPEQPPVSQEALAQIALALTRRVELPAQTRYRLVGVGLSGFSNVEEGAV 347 Query: 357 QLNLFDDNAPRP 368 Q LF + Sbjct: 348 QGQLFGEIPQAE 359 >UniRef50_Q8VMP6 RuvB protein n=4 Tax=Pseudomonas RepID=Q8VMP6_PSEPU Length = 402 Score = 270 bits (689), Expect = 1e-70, Method: Composition-based stats. Identities = 177/398 (44%), Positives = 243/398 (61%), Gaps = 4/398 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +F L DVN+FY SCE +FRP+L +PVVVLSN+DGC++AR EAKALG+KMGDP+FK ++ Sbjct: 9 IFGLVDVNSFYCSCERIFRPELRHRPVVVLSNSDGCIVARTNEAKALGLKMGDPYFKVRN 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + GV FSSNY LY ++S+RV + L P E YSIDE F +L G+ + D G Sbjct: 69 FLEQNGVAVFSSNYTLYGELSHRVGVAIASLVPEWEQYSIDELFVNLDGLPEP--IIDVG 126 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R I+A VLQ T L VGVGI TKTLAK A HA+K W+ +TGGVVDL + L+ +P Sbjct: 127 RAIQARVLQWTALPVGVGIGHTKTLAKAAQHASKVWREKTGGVVDLRKPDAVEWLLRRMP 186 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 VD+VWGIG R+ L GI T +L+ D R + + ++VVLERT+REL+GE C+ LE+ Sbjct: 187 VDEVWGIGSRMRDNLARDGITTAWELSQADARAMGRKYSVVLERTIRELQGESCMDLEQT 246 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 KQ I S+ FG+R+ +++A+ +Y RAAEKLR + C + I+TS F + Sbjct: 247 VAPKQTICSSKMFGQRVHTLQGLQEALATYIHRAAEKLRLQRSLCGAMRIGIQTS-FHGD 305 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P Y N+A+ PT D R + A ++ + I++ G Y KA V+L D +G +L Sbjct: 306 GPKYANAATCIPAYPTDDVRQLTKYALQAAEQIYRPGFAYSKAEVLLLDLRKRGEYTQDL 365 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 F + P S+ LM MD +N + G L A Sbjct: 366 FSPSQP-ERSDALMATMDKINRRWGHDCLRTAAGATDP 402 >UniRef50_Q0KKM4 Putative UV protection protein n=1 Tax=Plasmid pLB1 RepID=Q0KKM4_9ZZZZ Length = 420 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 162/419 (38%), Positives = 232/419 (55%), Gaps = 5/419 (1%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 DV FY S E +F P L G PV+VLSNNDGC +AR+ EAKAL V+MG+P FK +D R Sbjct: 6 VDVQNFYVSAERLFDPSLRGVPVLVLSNNDGCAVARSEEAKALHVRMGEPVFKIRDRIER 65 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIR 124 G+ SSNYELY+D++ R + + + S VEIYSIDE+F + + + ++R Sbjct: 66 HGMRLRSSNYELYSDLNRRFNAVIADHSDTVEIYSIDESFYRAPTLPSGLGDVEAAHKLR 125 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 +L++ L +G+ T+TL+K+AN AK ++ GGVVDL + E +R+L PV +V Sbjct: 126 EDILRQVGLPTRIGLGPTRTLSKVANALAKATEKVWGGVVDLHDTELRRRLFEKWPVGEV 185 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK 244 WGIG + +L +GI+T DLA R +VVLER VREL G C+ + Sbjct: 186 WGIGGALEARLRPLGIRTTADLAAMPPAVARDVGSVVLERLVRELNGIECVDFKLEPDAL 245 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 + +R FGE + +R+A+ AARAAEK+R++ + F S + N P Sbjct: 246 KNTAVTRQFGEPVKTLEELREAMARRAARAAEKIRAQGLVASRLIAFAHGSRYRPNPP-- 303 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 S S +L PT D R I+ + +A++Q G Y K GV+L D QG Q +LF Sbjct: 304 SASRSARLSPPTNDPRIILRIVGQMTEAMFQPGGVYTKCGVLLEDLTPQGHGQADLFAVA 363 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ-QWQMKRAMLSPRYTTRSSDLLRVK 422 P + L+ MD LN++ GR T+ A QG + KR+ SP +TTR D+ + Sbjct: 364 D--PRAPALLAAMDGLNSRFGRNTIMLAAQGHGPKAFDTKRSQKSPAWTTRIKDIPIAR 420 >UniRef50_A4BJD8 DNA polymerase IV n=1 Tax=Reinekea blandensis MED297 RepID=A4BJD8_9GAMM Length = 365 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 70/379 (18%), Positives = 143/379 (37%), Gaps = 24/379 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D + +YA+ E P+L G+PV V + N EA+ G+ P + Sbjct: 5 IIHIDCDCYYAALEMRDFPELRGRPVAVGGQGPRSVLSTCNYEARHYGLHSAMPSRRALS 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L G++ +++Y +S ++ + R+E S+DEAF D+T + Sbjct: 65 LCP--GLIIQPHRFDVYRAVSEQIRQIFSRYTDRIEPLSLDEAFLDVTDSTWFGGSASML 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IR ++Q T +TV GIA K LAK+A+ K + + E + +S+L Sbjct: 123 AEHIRQEIVQETGITVSAGIAPNKFLAKVASEWRKPNGLYS------ISPEAVDEFLSSL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G + S+KL G+ T D+ + + ++F + RG + Sbjct: 177 PLKKINGVGSKFSQKLAEHGLHTCGDVLRWSLPRLTQYFGKSGLWLYQRARGIDHRPVG- 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH-QYCRFISTFIKTSPFA 298 ++ + +F + + + +L ++ + + ++ + F+ Sbjct: 236 VRSDRKSLSVEHTFDTDLAGESACLTQLTPLLDTLNRRLAAKDPLPIKGVFVKVRFNDFS 295 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + L ++ AA ++ + G+ + Q QL Sbjct: 296 ------TTTMERGLPCLRASYEQLLKAAC------QKSHRGVRLLGLGVRFEEKQSKDQL 343 Query: 359 NLFDDNAPRPGSEQLMTVM 377 L+ + L + + Sbjct: 344 ELWPVATAQGNRASLESSL 362 >UniRef50_Q4ZWM4 DNA polymerase IV n=61 Tax=Bacteria RepID=DPO4_PSEU2 Length = 354 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 74/369 (20%), Positives = 138/369 (37%), Gaps = 26/369 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D + FYA+ E PDL GKP+ V + G + N EA+A GV+ Sbjct: 6 IIHIDCDCFYAAIEMRDEPDLAGKPLAVGGSAERRGVIATCNYEARAYGVRSAMSSRHAL 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L +V + Y + S + + + + +E S+DEAF D++ + T Sbjct: 66 KLCPDLTIV--KPRMDAYKEASREIHTIFRDYTDLIEPLSLDEAFLDVSEAGHFSGSATR 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++IR V + H+TV G+A K LAK+A+ K + + ++ + +++ Sbjct: 124 IAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNG------LFVITPDQVEEFVAS 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G+ + KL +GI DL + + F ER G ++ Sbjct: 178 LPVTKLHGVGKVTADKLGRLGIVDCADLRSRSKLALVREFGSFGERLWSLAHGIDDRPVQ 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE--HQYCRFISTFIKTSP 296 + +Q + ++ + D + + + + ++ +K Sbjct: 238 NDSR-RQSVSVENTYDTDLPDLAACLEKLPDLLETLSGRMARMEGQYRPGKPFVKVKFHD 296 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG-DFFSQGV 355 F + L + RD+ + A + G + G+ + Sbjct: 297 F-----------TQTTLEQSGAGRDLGSYEQLLAQAFARGGKPVRLLGIGVRLHDLRAAH 345 Query: 356 AQLNLFDDN 364 QL LF Sbjct: 346 EQLELFSRQ 354 >UniRef50_C5JS23 DNA damage repair protein Mus42 n=2 Tax=Ajellomyces dermatitidis RepID=C5JS23_AJEDS Length = 1171 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 63/408 (15%), Positives = 126/408 (30%), Gaps = 39/408 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+L +PV + + + N A++ G+K G Sbjct: 372 ILHVDFDSFFAAVSIRKHPELVDQPVAIAHGTGPGSEIASCNYPARSFGIKNGMWMKAAL 431 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-- 117 + + ++ Y S + + V+ SIDEA D+TGV + Sbjct: 432 QMCP--NLKVLPYDFAAYEQASRAFYEVILSIDGIVQSVSIDEALVDITGVCLDAGGSDG 489 Query: 118 ----------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + + +R +V +RT + VGI A++A AK + Sbjct: 490 RGISEGSIWREQEKADEIAQNLRNSVKERTGCNISVGIGGNVLQARVALRKAKPAGQFQ- 548 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 + + L V D+ G+ + KL+ +G+ V D+ D + Sbjct: 549 -----LKPDAVLDFIGTLAVKDLPGVAHSLGAKLEELGVTFVKDIRDLSREKLTSSLGPK 603 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG ++ ++ + ++G R + + + S +L Sbjct: 604 TGAKLWDFARGIDNTEVG-VQAPRKSVSAEINWGIRFVNQAQAEEFVQSLCDELHRRLVE 662 Query: 281 EHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ I + + SV L T S I A L Sbjct: 663 NLVKGKQLTMRIMKRSADAPLEPVKHLGHGKCDTFNKSVNLGVATNASDIIGREAITILR 722 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 + + GV + D + + + Sbjct: 723 GFKFSPGDLRGLGVQMTKLEPVKQNHARELDSSQKQISFKPASPTRQR 770 >UniRef50_C7RGQ0 DNA-directed DNA polymerase n=5 Tax=Anaerococcus RepID=C7RGQ0_ANAPD Length = 345 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 80/362 (22%), Positives = 158/362 (43%), Gaps = 21/362 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D +AFYASCE + P + P+ V +N + N +A+ G+ P F K+ Sbjct: 4 IFHVDCDAFYASCEELRNPKMKNHPLAVGGLSNKSILTTANYKAREFGLHSAMPVFIAKE 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ +++ Y S V S ++E + +E S+DEA+ + Sbjct: 64 LCP--NLILLPVDHKYYRKKSKEVFSLVKEYAKLMEQVSVDEAYL----LVETDSPKKLA 117 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R+++ VL++T + + +GI+ K LAKLA+ K E + + Sbjct: 118 RKLQEEVLRKTGIGISIGISYNKFLAKLASDWQKPHGITQ------IRKEDLDYFLPNIS 171 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ V GIG++ S++L+ +GI V DL D ++ +F +RG ++ Sbjct: 172 VNKVHGIGKKTSERLNKIGIYKVEDLLKLDYEYLIDNFGKQGAYIYHVIRGVDDRKINPS 231 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ I R+F + D + + + + +++ ++ + ++ IK + F + Sbjct: 232 -RVRKSIGKERTFAQNTNDMAILTSYLKNLSELIEDEMDIKNIQGKTVNLKIKDAKFKNH 290 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S+ L P ++DI N A L+ + + G + G+ L + + + QL+ Sbjct: 291 ------TRSITLQEPIYRAKDIYNEALSLLEDLHK-GEMLRLIGISLSNLQERKLNQLSF 343 Query: 361 FD 362 D Sbjct: 344 LD 345 >UniRef50_B5JKI6 ImpB/MucB/SamB family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JKI6_9BACT Length = 361 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 70/358 (19%), Positives = 133/358 (37%), Gaps = 26/358 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FYA+ E P+L G+PV V + G + N EA+A G+ P ++ Sbjct: 14 IIHIDMDCFYAAIEVRDHPELRGEPVAVGGRSSRRGVLTTCNYEARAFGIHSAMPTYQAM 73 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 ++ +E+Y + S R+ + + + +E S+DEA+ D++ + + Sbjct: 74 QRCPH--LIIKPVRFEVYKNESRRIRAIFADYTSAIEPLSLDEAYLDVSHLDRP--ASAI 129 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIR + Q T L GIA K LAK+A+ K + ++ M L Sbjct: 130 ALEIRKRIRQTTGLNASAGIAPNKMLAKIASDWRKPNGQYE------ITPDQIADFMREL 183 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G++ + +L ++ I T DL ++KHF RG + Sbjct: 184 PVSKIWGVGKKSAARLASLDIATCGDLQQKTRLELQKHFGKFGSELYELSRGIDHRDVVS 243 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE--HQYCRFISTFIKTSPF 297 ++ + C R++ + +Q + L + + K S F Sbjct: 244 -NRIRKSMSCERTYATDLHSLDDRQQHAADIFQELSADLARFKSDRPIHKLFVKCKYSDF 302 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 L +D+ ++ + + G+ + + Sbjct: 303 TRTSIERSG-----LPFTLASFQDL------LAESYHRRSDPIRLLGLGVRFTDPETQ 349 >UniRef50_A9NFA5 DNA-damage repair protein n=5 Tax=Bacteria RepID=A9NFA5_ACHLI Length = 448 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 93/417 (22%), Positives = 156/417 (37%), Gaps = 24/417 (5%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 D+ +FYAS E V R D + P+VV + G V+A + K+LGV F+ Sbjct: 37 ILCIDLKSFYASVECVLRGLDPFKTPLVVADKSRGGGSIVLAVSPYLKSLGVPSRCRIFE 96 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCRD 115 L ++ + Y + S V+ + + +YSIDEAF DLT Sbjct: 97 ---LPEDLNIIYAKPQMQTYLEYSASVIGVYLDFISEADLYVYSIDEAFLDLTSYLAYYK 153 Query: 116 LT--DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA-AKKWQRQTGGVVDLSNLERQ 172 T + EI T+ + LT GI ++KL+ AKK + + + + Sbjct: 154 KTDIELAEEILNTITSKLGLTATCGIGPNMIMSKLSMDIEAKKNP---NNIAKWNYDDIK 210 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 L P+ +WGIG R+ L+ +G+ T+ D+A+ +++ F V+ E G Sbjct: 211 DHLWPVTPLSKMWGIGHRMESHLNKLGLFTIGDIANYPKEKLKRRFGVLGEELWYHTHGI 270 Query: 233 PCLQLEEF---APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 ++++ + + + I +LR + + IS Sbjct: 271 DLSEIKDKYKLRTKPKSFGSGQVLFRD-YSETEIMTIILEMVDDVTRRLRIAKKRAQTIS 329 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 I + G S V L PT I D ++ G+ + GV L Sbjct: 330 LSIGYTK----SVAGGFSRQVTLEQPTSSEATIYQTCQDLFD-MYYEGYPIRTVGVHLSK 384 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 V Q +LF+D QL MD + K G+ ++ + +R Sbjct: 385 LTDSKVYQYSLFEDAHQLEKEYQLHMTMDKIKHKFGKNSVIRLSSEQEHATAKQRNK 441 >UniRef50_Q0FEJ5 DNA polymerase IV n=3 Tax=Rhodobacterales RepID=Q0FEJ5_9RHOB Length = 391 Score = 268 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 78/396 (19%), Positives = 140/396 (35%), Gaps = 18/396 (4%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 A D +AFYAS E P KP+++ G V A+ GVK P FK L Sbjct: 12 AHIDCDAFYASVEKRDNPKFKDKPLIIGGGQRGVVSTACYIARIKGVKSAMPMFKALKLC 71 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 V+ + YA S + + ELSP +E S+DEAF DL G Sbjct: 72 PEAIVIA--PRMDAYAKASKEINEMMSELSPSIEPLSLDEAFIDLRGTEKLHGEPPALSM 129 Query: 123 IR--ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R + ++ ++ VG++ K LAKLA+ K + + + ++ Sbjct: 130 ARLVQRIEKQLKISASVGLSYNKYLAKLASDLDKPRG------FSIIGKYKIEEFLAPKS 183 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + +WG+G+ +L+ GI+ DL + + + + + RG + Sbjct: 184 IGLIWGVGKVAQMRLEQDGIRIFADLQRRSHQELIDKYQNMGDHLWHLCRGIDNRNVI-A 242 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I +F I + + I + + +++ +S++ I+ Sbjct: 243 KNVIKSISKETTFSSDINNIEKLDGYIWRLSEQVSQRAKSKNLLGHVITLK------IKT 296 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + + S PTQ + I A R LD + G ++ GV + + Sbjct: 297 KKFKTISRRKTQREPTQIAEKIYAEARRMLDEVASEG-PFRLIGVGISNLIDADKIDQLN 355 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 D + + G+ + Sbjct: 356 DFLKTDEAKKADAERATDLIKKRFGKNAILKGRSLR 391 >UniRef50_A5G2F2 DNA-directed DNA polymerase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G2F2_ACICJ Length = 411 Score = 268 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 103/394 (26%), Positives = 156/394 (39%), Gaps = 21/394 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AFYAS E RP+L KPV+V G V A A+ GV+ P FK + L Sbjct: 37 IAHVDCDAFYASVEKRDRPELTDKPVIVGGGTRGVVAACCYIARLSGVRSAMPMFKARKL 96 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 V + YA + + + + L+P V+ SIDEA DL+G Sbjct: 97 CPD--AVVIAPEMRKYAAAAAEIRALMATLTPLVQPLSIDEAALDLSGTAALHRAPPAVV 154 Query: 122 EIR--ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R V +TV +G+A + LAKLA K G +++ Sbjct: 155 LSRFARQVEAEVGVTVSIGLAANRLLAKLAAERDKPRGFAVLG-------AEAAAVLAPE 207 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + G+G +++KL MGI V LA + R R RG ++ Sbjct: 208 PVGILPGVGPALARKLAGMGITRVGQLAALNDRAARARLGEDGPMLAARARGIDPRPIDP 267 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I +F E I D S+ + + + A +LR+E + +KT+ F Sbjct: 268 ARA-TKSISAETTFAEDIDDAASLARVLFPLCEKLARRLRAEGFAAAGLVLKLKTARFET 326 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + +V+L PTQ + I AA L + AG RY+ G+ A Sbjct: 327 H------THAVRLTAPTQLAETIFEAAKPVL--MRAAGPRYRLIGIGAARLTDAAEADRG 378 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG 393 D + + ++ L AK G G + G Sbjct: 379 DLVDQETPRRAAR-EDAVERLRAKFGTGIIRRGG 411 >UniRef50_A3M2E2 DNA-directed DNA polymerase n=8 Tax=Acinetobacter RepID=A3M2E2_ACIBT Length = 436 Score = 268 bits (684), Expect = 3e-70, Method: Composition-based stats. Identities = 150/424 (35%), Positives = 226/424 (53%), Gaps = 4/424 (0%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F L DVN Y S ET F P L G+ V+VLS+NDG V+AR+ AK LG+KMG+P F+ DL Sbjct: 13 FFLVDVNNMYTSVETAFDPSLTGRSVIVLSSNDGNVVARSPAAKKLGIKMGEPLFQILDL 72 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 R V+ SSNY +Y +MS R L E EIYS+DEAF +LT R +L Sbjct: 73 VMRNDVIVLSSNYIIYGEMSRRFHKILAEYVSPENHEIYSVDEAFLELTSYRGIYNLNQC 132 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++I+ +L+ L V VGI ++KT AK+ N+ AK + G E + + Sbjct: 133 AQDIKEKLLKLLSLPVCVGIGRSKTEAKIMNYIAKTYPHLNGICNVFDLAEVKDSIFRNT 192 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V +VWG+G + KKL M I TV DL I+ F+VVL+RTV EL G C+ +E Sbjct: 193 DVGEVWGVGSQQKKKLRLMNINTVYDLMTASPSHIQSVFSVVLKRTVLELNGISCIDIEH 252 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 PTK++I+ SR+FG+RITD +++A+ A + R+E I F ++PF Sbjct: 253 TPPTKKQIVSSRTFGQRITDIHDLKEAVIKRTQEAFTRARNEQVLVGCIIVFAYSNPFDK 312 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 +P+Y S PT D R ++ ATR +D ++++G ++KAGV+L + + Sbjct: 313 TKPFYKKEQSSSFAVPTDDLRLLVQTATRLMDQVYKSGIEFKKAGVILTCLEPKHTYTYD 372 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ-WQMKRAMLSPRYTTRSSDL 418 L D+ +EQLM ++ + G+ + F G + + W + + Y + Sbjct: 373 LLTDHQDLEKTEQLMKAIEEVQQIFGKNKIGFGGSMFKNRIWNLTANYQTRNYF-SFDGM 431 Query: 419 LRVK 422 +++K Sbjct: 432 IKIK 435 >UniRef50_B6J224 DNA polymerase IV n=5 Tax=Coxiella burnetii RepID=B6J224_COXB2 Length = 372 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 71/365 (19%), Positives = 135/365 (36%), Gaps = 24/365 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ FY + E P L KPV V ++ G + N A+ GV+ K Sbjct: 27 IIHVDMDCFYVAIEMRDNPKLREKPVAVGGAAHSRGVICTANYIARGYGVQSAISSSYAK 86 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTD 118 L ++ N E Y + +++ +E + VE S+DEA+ D++ + + T Sbjct: 87 KLCPS--LIILPVNMEKYRAIGHQIRGLFQEYTHLVEPLSLDEAYLDVSDCKIHQGSATR 144 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +EIR +++R LT G+A K LAK+A+ K + + + + Sbjct: 145 IAQEIREQIVKRHSLTASAGVASNKLLAKVASAWNKPNGIK------VILPSKADDFVKT 198 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP++ + G+G+ ++K+ AM I T DL + K F RG +E Sbjct: 199 LPIEKIHGVGKITAQKMKAMNIHTCSDLQALSREALSKSFGSFGVTLYELCRGIDPRSVE 258 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE-HQYCRFISTFIKTSPF 297 ++ + +F + I + + ++L + R IK + F Sbjct: 259 P-NRIRKSVSVEHTFSQDIATLSECEIELANLFNDLKQRLLKHTDRCIRKQFVKIKFNDF 317 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + + ++ L D+ + + GV + + Sbjct: 318 KI-TKAETITQTISL--------DLFKHL--LYQIFERQQKPVRLLGVGVSFSEDPLLEL 366 Query: 358 LNLFD 362 F+ Sbjct: 367 QRTFE 371 >UniRef50_C8NZM9 DNA polymerase IV n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZM9_ERYRH Length = 392 Score = 267 bits (682), Expect = 6e-70, Method: Composition-based stats. Identities = 86/388 (22%), Positives = 161/388 (41%), Gaps = 20/388 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-CVIARNAEAKALGVKMGDPWFKQK 59 + D+NAFYAS + L+GKPVVV SN G V + EA++ GV P K Sbjct: 4 VIFHIDINAFYASAHLITDSSLYGKPVVVCSNQRGSVVTTASYEARSFGVNSAMPLAHAK 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTD 118 L V+ +++LY ++S + M+ + S ++ SIDE + D+T ++ D Sbjct: 64 RLCPNLEVI--EVDFDLYQELSVKFMNIIRSYSAVMQPASIDECYVDMTEVIKKYEKPLD 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EI+ + + L + +G+A K LAK+A+ K + + + + Sbjct: 122 LAVEIQKNIWEALRLPISIGVAPNKFLAKMASDMQKPRGI------TVLRIREVSQKLWP 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L ++ ++GIG++ KL +GI+T+ DLA + ++ V + V++ G ++ Sbjct: 176 LSIESMYGIGQKTVPKLKQIGIETIGDLARFNPDHLKSILGVNAQNFVQKANGYDHSVID 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I S++F + +TD +R AI + ++ + + +S I+ + Sbjct: 236 TDVTM-KSIGQSKTFKDAMTDLDEIRNAILNELVEVKRRMERQDVVGKTVSFSIRLDDYK 294 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S T+D + D G V + + + Sbjct: 295 ------TATRSFTFDEYTRDQNLVFERLMSLYDEFEGEG-GVSFISVTMTNLLPKDEIIE 347 Query: 359 NL--FDDNAPRPGSEQLMTVMDTLNAKE 384 L FDD ++ + + LN Sbjct: 348 QLNIFDDLDEITVNDIIQRLNKELNQDL 375 >UniRef50_C4FTM8 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FTM8_9FIRM Length = 381 Score = 267 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 69/368 (18%), Positives = 148/368 (40%), Gaps = 21/368 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYA+ E P + KP+V+ + G V N +A+ G+ Sbjct: 27 ILHVDMDAFYANVEARDNPAIAYKPIVIAKHPKLTGGRGIVSTCNYKAREYGIHSAMTAA 86 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRD 115 + V + ++ Y ++S ++ + + + +E S+DEA+ D+T + Sbjct: 87 EAFKRCPH--AVFIAGDWSHYQEVSQQIRTIFAQYTDLIEPMSLDEAYLDVTHNKLGIQS 144 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 T + I+A + +LT +G++ K LAK+A+ K + + ++ + Sbjct: 145 ATHLAQRIQAQIKAELNLTCSIGVSYNKFLAKIASDYRKPFGI------TVVTPDQALEF 198 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + LP+D +G+GR+ GI T DL ++ + +HF + + ++RG Sbjct: 199 LDDLPIDKFYGVGRQSVPYFHQRGIMTGADLRAIELEDLIEHFGKMGKSLYYKVRGVHDA 258 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ ++ I +F + + + + A+ R E L++++ + + ++ I+ Sbjct: 259 PVQP-HRERKSIGKETTFIQFLAEEEGVLDALTQLTKRVVEILKAKNFHAQTVTLKIRYD 317 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + + L +P+QD I A + + GV Sbjct: 318 DFE------TLTRQLSLGSPSQDVEVISQAVQELWELHGHLHKSVRLLGVSTAGLIQLDK 371 Query: 356 AQLNLFDD 363 L + Sbjct: 372 VHTQLSFE 379 >UniRef50_C5CA41 DNA polymerase IV involved in DNA repair n=3 Tax=Micrococcus luteus NCTC 2665 RepID=C5CA41_MICLC Length = 431 Score = 266 bits (680), Expect = 9e-70, Method: Composition-based stats. Identities = 93/409 (22%), Positives = 158/409 (38%), Gaps = 29/409 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ S E +PDL G+P V + V++ + A+A GV+ P + Sbjct: 15 ILHVDMDAFFLSVELREQPDLEGRPAAVAAPSGRSVVLSASYAARAYGVRSAMPLAHARA 74 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-F 119 L +V +LY +S VM+ L +++P +E S+DEAF D+ G R + Sbjct: 75 LCP--PLVVIPPRQQLYRAVSAEVMAVLADVTPVMEQLSVDEAFLDVAGARRRLGPPEHI 132 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G IR V L VG + K +AK A+ AAK + + +R + L Sbjct: 133 GHLIRERVRSALGLPCTVGGSAVKFVAKTASTAAKPDG------LLIVPPQRTLDFLHPL 186 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV +WG+G + +++L G+ T+ DLA D + F RG + Sbjct: 187 PVGRLWGVGPKAAERLARRGVATIGDLARVDPARLEASFGAAGREWASLARGIDPRPVAP 246 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P + I +F D + + R A +LR+E ++ +K ++ Sbjct: 247 -RPAARSIGADHTFDVDPVDVVGVDPEVLRLCHRVAARLRAEQVTAGAVTVRLKAPDGSV 305 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDF---FSQGV 355 S + +L PT D++ A R + + + H + GV Q Sbjct: 306 R------SRTARLARPTATGHDLLGPARRLVRELHAERPHPVRLVGVRAERLGDEADQPP 359 Query: 356 AQLNLF--------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 AQ LF + + +D + + + A Sbjct: 360 AQEALFGGPAWGTEGEASEAGDWAGAEAALDAVARRFPTAAVRPASLLG 408 >UniRef50_B1ZN03 DNA polymerase IV n=2 Tax=Opitutaceae RepID=DPO4_OPITP Length = 392 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 74/404 (18%), Positives = 138/404 (34%), Gaps = 20/404 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+ SCE +P+L G V G + + + EA+A GV P + + Sbjct: 6 IVHLDADAFFVSCELALKPELRGTKCAVGGRERGIISSASYEARACGVYTPMPTTRALKV 65 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL--TDF 119 ++ LY+ +S ++ E L+P V+ SIDE + DL Sbjct: 66 CPD--LIMLPHTGGLYSRVSRQMFELCETLTPLVQRNSIDEGYLDLGPCGFKTSAEIEQA 123 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++ + Q+ +T G+A K +A++A+ K + + + ++ L Sbjct: 124 VHGLQHKIEQQLQITASFGLAVNKLVAQIASKLRKPKG------FVVVPSGTEAEFLAPL 177 Query: 180 PVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 P+ + G+G + ++L GIK V DL + F G +E Sbjct: 178 PIGKLPGVGPKTEERLVGRHGIKLVRDLLARGEAELEAIFGDGWREMRDGALGIDDRPVE 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + +F E I + + + + K+R + + R ++ ++ F+ Sbjct: 238 TEHEDAKSYSQQETFDEDIASFAEIERVVKRMIDELLPKIREDGKRVRTMTVKVRYPDFS 297 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 S L T T L W + V + Sbjct: 298 QE------SHGRSLSAGTDLEAPFYPLVTPLLRQAWTKKRPLRLVSVRFSGVED---TPV 348 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 L +L V+D LN + G + Q ++ Sbjct: 349 QLEMFAQNEEKRRRLAAVLDHLNRRGGDAVVQHGHQLAKRPPPR 392 >UniRef50_A8UAY3 ImpB/MucB/SamB family protein n=5 Tax=Bacilli RepID=A8UAY3_9LACT Length = 432 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 84/418 (20%), Positives = 169/418 (40%), Gaps = 20/418 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVV----LSNNDGCVIARNAEAKA-LGVKMGDPWF 56 DV +FYAS E V R K ++V G V+A + AK LG++ + Sbjct: 13 IFCIDVKSFYASVECVERGLHPLKALLVVMSNADKPGGIVLAASPMAKKVLGIRNVTRKW 72 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCR 114 + + +V Y + + + + IYSIDE+F + G Sbjct: 73 E---IPYHPDLVIVPPRMSYYIKKNTEINDIFRKYVSDEDLHIYSIDESFISVRGSLKLF 129 Query: 115 ---DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + R I+ + ++T L V +GI +AKLA K+ + + + + Sbjct: 130 KKKSAYELARMIQYHIFKKTGLYVTIGIGDNMLMAKLALDNGAKY--NSELIAEWRYEDV 187 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + + D+WGIG R ++L+++GIKTV DLA + +R ++ E+ G Sbjct: 188 PKTVWKIENMTDMWGIGSRTERRLNSLGIKTVYDLAHANFYQLRDSMGLIGEQLYANAWG 247 Query: 232 EPCLQLEEFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + ++ S+ + ++ I A + A ++R H +S Sbjct: 248 IDRSDIRDSYRPLEKSYGNSQILKKDYFKRQEIKIVIREMAEQVATRIRKHHCQTGCVSL 307 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 + S + + G S +K+ + T +++ ++ + ++ ++ G+ Sbjct: 308 SVSYSKYEEKD---GFSRQLKIPS-TSNTKKLVEYCFEIFNKYYEDDKSVRRIGITYSKL 363 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 QL+LF++ + +E+L ++D + K G +L A + + R+ L Sbjct: 364 SYTSDIQLDLFENPTEQITNEKLDLLVDKIRDKYGFQSLVHASSLMDGATAINRSSLV 421 >UniRef50_D1BPW6 UMUC domain protein DNA-repair protein n=2 Tax=Veillonella RepID=D1BPW6_VEIPT Length = 500 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 92/464 (19%), Positives = 172/464 (37%), Gaps = 76/464 (16%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E + P+ G PV+V ++ G V + EA+ GV P + K L Sbjct: 1 MHVDMDAFFASIEQLDHPEYKGHPVIVGGLSSRGVVATCSYEARKFGVHSAMPILRAKKL 60 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFG 120 V + Y ++SN++ S ++E +P +E SIDEAF +++G+ G Sbjct: 61 CPDGIYVY--PRMDRYKEVSNQIFSIMKEFTPYIEPLSIDEAFLEVSGMSTMYSGPKALG 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + I+ V ++T L + G+A K LAKLA+ K + + R++++++ LP Sbjct: 119 QAIKDRVFEKTGLIISAGLAPNKFLAKLASDLDKPDG------LVVIPYGREKEVLAPLP 172 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIR-FIRKHFNVVLERTVRELRGEPCLQLEE 239 + +WG+G R K L A G + + + +R G + E Sbjct: 173 IKRIWGVGPRTEKILKAGGFHLIGHIQSLPDESTLIPLVGNQAKRIWELANGIDDRPV-E 231 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 Q I ++ E +T+ ++ +A R +++LR Y +S ++ F Sbjct: 232 TDRKIQSIGAEETYEEDLTEGRAIELEFRYFANRLSKRLRRRSLYGHTVSIKVRYDDFT- 290 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA---------GHRYQKAG------ 344 S +L TP+ A + + Q + G Sbjct: 291 -----TVSRQKRLDTPSDHEHVFFETALLLWNKLLQDKTSKNPKGTKKDVEALGATMKVK 345 Query: 345 ----------------------------------------VMLGDFFSQGVAQLNLFDDN 364 + + + Q +LF+ Sbjct: 346 STDFRYSSSKDNRSNHIGSKYSSSSEIAFMDPPGPIRLLGLTVSGLDEEVPMQDSLFESP 405 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAG--QGIQQQWQMKRAM 406 + ++L +V+D+L +K G + Q ++R Sbjct: 406 QDKT-EDKLSSVLDSLESKFGETAVMSGALWQRFHGDNGIRRKR 448 >UniRef50_A7I5X9 DNA-directed DNA polymerase n=1 Tax=Candidatus Methanoregula boonei 6A8 RepID=A7I5X9_METB6 Length = 365 Score = 266 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 87/368 (23%), Positives = 150/368 (40%), Gaps = 21/368 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D++ FYA+ E P++ GK VVV G V + EA+A GV+ P Sbjct: 12 IVLHADMDCFYAAVEMHDHPEIAGKAVVVGADPQGGAGRGVVSTASYEARAFGVRSAMPI 71 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + L G V + YA +S +M +E RV+ SIDEAF D++ VR+ Sbjct: 72 SQAYRLCP--GAVYLRPDMARYAAVSAEIMGIFKETGYRVQQVSIDEAFLDISPVRSFDT 129 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 D ++ T+ R +T +G+A +K +AK+A+ K + + R Sbjct: 130 ARDLAVRLKQTIRDRVGITCSLGVAPSKIVAKIASGHQKPDGM------TVVTPDSARDF 183 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 ++ LP+ + GIG + +++A+GI T+ +LA DI+ + F G Sbjct: 184 LAPLPIRKIPGIGGKTGAQIEALGITTIGNLATCDIQVLVGAFGRSAGLLREAALGHDNS 243 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ E + I +F D + + A+ + E + ++ ++ + Sbjct: 244 EVVERDGV-KSISKETTFANDTEDPKEIAATMELLVREVAQAIADEALQFKTVTIRVRYA 302 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + + LL D I AA L +W G ++ G+ L Q Sbjct: 303 GF------VSKTKARSLLHYHNDEAAIRAAAGELLRELWD-GKPIRRLGLRLSTLRHQDS 355 Query: 356 AQLNLFDD 363 Q LF Sbjct: 356 RQQTLFGS 363 >UniRef50_C2KZY4 DNA polymerase IV n=2 Tax=Clostridiales RepID=C2KZY4_9FIRM Length = 418 Score = 265 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 87/366 (23%), Positives = 144/366 (39%), Gaps = 20/366 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AFYAS E P L KP+++ + G V N EA+ GV+ + Sbjct: 14 IILHVDMDAFYASVEMRDNPTLKDKPLIIGAKPTERGVVATCNYEARKYGVRSAMNSKEA 73 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 L V ++E Y +S + LE + +VE ++DE + DLT V Sbjct: 74 FRLCP--KAVFLYPDFEKYKAVSEELHEILESYTKQVEYIALDEGYLDLTEVAKDFSEAE 131 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 GREI+ V + LT VGIA KT AK A+ K + E +L+ Sbjct: 132 KIGREIQRRVAEELRLTCSVGIAYGKTAAKTASEEKKPNGFF-----MIQRREDYVELLR 186 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 V ++ +G + +++L + GI TV DL + + +R + + G ++ Sbjct: 187 DRDVRALFTVGAKTAERLYSFGIYTVKDLQEKEKEVLR-LLGNQGKMLLELSYGIDHRKV 245 Query: 238 EEFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + P Q I +F E +TDY + + + R + + Y R +S I + Sbjct: 246 VPYRPEDTQSISKEMTFQEDVTDYSFLDDVLFLLSFRVENRAKRYGLYARGVSLKITFAD 305 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + S + TQ + + A+ L I R + G Sbjct: 306 ------MKTITRSALISESTQSAFSLYKNASALLQQI--PRRRVRLIGEGFYHLEENEGR 357 Query: 357 QLNLFD 362 QL+ D Sbjct: 358 QLSFSD 363 >UniRef50_B0S0R3 DNA polymerase IV n=4 Tax=Clostridiales RepID=B0S0R3_FINM2 Length = 347 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 86/361 (23%), Positives = 153/361 (42%), Gaps = 19/361 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 F D++AF+ASCE + P L P+VV + G + N EA+ G+ P F+ K Sbjct: 5 FLHFDLDAFFASCEILDNPKLKHVPMVVGGRSQRGIITTANYEARKYGLHSAMPIFQAKK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + +V + ++E Y S +V L S +++ SIDE D++ +R D + Sbjct: 65 IVP--NLVIVAPDFEKYRRNSEKVFKVLSSFSNKIQKMSIDEGCMDISHIR--MDRLELA 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 I+ V +T L++ +GI+ +LAKLA+ K + + + ++ L Sbjct: 121 NLIQENVRIKTGLSISIGISYNMSLAKLASDWNKPHGIK------IITQDDIPNILLDLK 174 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V + GIGR+ +KL+ +GIK V DL D +R+ F E +RG QL+ Sbjct: 175 VGKIQGIGRKSEEKLNKIGIKKVSDLYDLSRNNLRELFGKFGEVIYDRIRGIDERQLDLS 234 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ I +F + +Y + ++ ++ L ++ + I IK + F++ Sbjct: 235 -RIRKSIGVEYTFERDLKNYNELLNKASEFSEELSDDLHKKNIKAKTIRIKIKLNDFSV- 292 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S+ L DS DI + + G+ + QL Sbjct: 293 -----ITKSMTLEEYISDSSDIFRIVKYLVVNTKIE-KSVRLFGITAANLSDTTFEQLKF 346 Query: 361 F 361 Sbjct: 347 L 347 >UniRef50_Q2L7B2 REV1 n=7 Tax=Sordariomycetes RepID=Q2L7B2_NEUCR Length = 1343 Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats. Identities = 77/446 (17%), Positives = 145/446 (32%), Gaps = 49/446 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+ KP VV N + + N A+ GVK G Sbjct: 368 IMHVDFDSFFCAVSLKKAPEYRDKPAVVAHGNGKGSEIASCNYPARKFGVKNGMWMKHAL 427 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-------- 111 +L + ++ Y + S + + + V+ SIDEA D+T + Sbjct: 428 ELCPDLKI--LPYDFPGYEEASRQFYDAILGIGGVVQSVSIDEALIDVTDIVMAEAGSSG 485 Query: 112 ----------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + ++R + ++T V VGI LAK+A AK + Sbjct: 486 IGISEGSIWREQEKVDQMASKLRDRIKEQTDCHVSVGIGANILLAKVALRKAKPAGQYQ- 544 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 E L+ L V+D+ G+ I KL+ +GIK V D+ T + Sbjct: 545 -----IKPEEALDLLGELNVEDLPGVAHSIGAKLEELGIKFVKDIRQTSKERLISALGPK 599 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 E+ RG ++ E P ++ + ++G R + + + S + +L S Sbjct: 600 TGEKLWEYSRGIDRTEVGEQ-PIRKSVSAEVNWGIRFVNQEEAEEFVRSLSQELERRLLS 658 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 E + ++ I + + SV T I A L Sbjct: 659 EGVKGKHLTMKIMRRAADAPLDPPKHLGHGKCDTFNKSVSFGVGTNSGEVIGKEAVAILR 718 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGV-------AQLNLFDDNAPRPGSEQLMTVMDTLNAKE 384 + + + G+ + + F A ++ +D Sbjct: 719 SYKFSPGDLRGLGIQMTKLEPLKPSAAQQGSQKKLSFGAAATSSAKKRKAEAIDDEPQ-- 776 Query: 385 GRGTLYFAGQGIQQQWQMKRAMLSPR 410 + + ++ + L+PR Sbjct: 777 -SPAAHRSSTERDEKDPITADPLTPR 801 >UniRef50_C9M6E1 UmuC protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M6E1_9BACT Length = 429 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 134/408 (32%), Positives = 206/408 (50%), Gaps = 7/408 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + LCD + F+ SCE VFRP+L G+PVVVLS+NDGCVI+R+ EAK LG+ M P+FK Sbjct: 7 LIGLCDGDNFFVSCERVFRPELNGRPVVVLSSNDGCVISRSNEAKRLGIPMCAPFFKIAP 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L RR G+ S N E+Y +MS+R+M+ + + S +VE YS+DEAF +L+ + + D Sbjct: 67 LVRRHGMTALSGNMEMYREMSDRMMAVIAQFSDQVEQYSVDEAFFNLS-IASLTDPAAHC 125 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +R T+ +R L V +G A +KTLAK A+ K V L E ++++P Sbjct: 126 LALRRTIARRIGLPVSIGAAPSKTLAKAASEMTK----GKEPGVRLIRPEETACAVASMP 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V+ VWGIG+R ++K+ + GI+ V L +++ HF++ + ELRG L Sbjct: 182 VERVWGIGKRTARKMLSFGIRLVPQLTARPNGWLKGHFSIREVQIADELRGLKRFPLSSQ 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 T Q I +R+ + + + + +LR H + FI+TS F+ Sbjct: 242 EETPQSIQVTRTSAGPLRTEDELWDGLIRHILGGTARLRRHHLAAGRMELFIRTSYFSSQ 301 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + + AS T D + A + L ++Q G Y+ +GV D QL Sbjct: 302 SRFASSRASFSPP--TDDDLACLRAGRQILSRVFQPGWNYRASGVRFSDLSPSQPRQLTF 359 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 D +LM +D LNA G GT+ A + + + +M S Sbjct: 360 ADQLPGTRKRHRLMEAVDALNADLGAGTVLPAALLSKNRSAAQHSMTS 407 >UniRef50_B0TAW2 DNA polymerase iv n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TAW2_HELMI Length = 409 Score = 264 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 85/411 (20%), Positives = 150/411 (36%), Gaps = 19/411 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFKQ 58 L D+N+FYAS E P L G+PV+V + G ++A + EAK GVK + Sbjct: 7 VLLADMNSFYASVEMAHNPTLRGQPVLVCGDPERRHGIILAASREAKRRGVKTAMTVGEA 66 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLT 117 + + VC LY ++S ++ LSP VE YS+DE F D+ G + D Sbjct: 67 RAICPD--AVCVRPRMSLYLEVSWQIQQIARTLSPLVEPYSVDELFIDVRGAEHIWGDAV 124 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + R V + + VG+ K L+K+A K + + + + Sbjct: 125 EAAGIFRQRVWEAVKVPCSVGVGPNKFLSKMACDVEAKKSPSGVALWRV---DDVEAKLH 181 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LP+ ++ +G R+ + MG+ T+ DLA + ++ + F + G + Sbjct: 182 PLPIGKMFMVGSRMERHFRNMGLLTIGDLAHYPVDYLMRRFGLRGAVYHNLAWGRDGSPV 241 Query: 238 EEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + + S + + + + R + R +S ++ Sbjct: 242 RPDSLEQTKSVGHSVTLPRDYHHSDDIELVLLELTDEVCRRARKLGKAGRTVSVGLRAYD 301 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 G L +P+ S + A W G + V L G Sbjct: 302 -----LTRGFYRQTTLPSPSNLSGPVFEKAQLLFRRHWD-GRPVRTVTVDLSGLEEDGTL 355 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 Q LF D +++ MD + G + A + RA+ Sbjct: 356 QQELFRDMD---RQDRVSRTMDRIRDAMGTTAIVRASSLLPAGQARDRAVK 403 >UniRef50_C7QBJ0 DNA-directed DNA polymerase n=3 Tax=Actinomycetales RepID=C7QBJ0_CATAD Length = 834 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 94/393 (23%), Positives = 152/393 (38%), Gaps = 39/393 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E + +P L GKPVVV N G V + EA+A GV + Sbjct: 12 IFHVDLDAFYASVEQLHKPSLRGKPVVVGGIGNRGVVSTASYEARAFGVHSALATGIARR 71 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD----- 115 + + Y S RVM+ + ELSP VE S+DEAF D++ + D Sbjct: 72 RAPNAAYLI--PRFGAYQAYSERVMALMHELSPLVEPLSLDEAFIDISHLFGSLDTTTPH 129 Query: 116 -----LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 ++R + T LT VG +K +AK+A+ A K + + Sbjct: 130 NATLEARRIAEDLRTRIKNETGLTASVGAGTSKLIAKIASDAEKPDG------LVVIEPG 183 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVREL 229 ++ + LPV +WG+G +++L +G TV DL + + Sbjct: 184 TEQTWLDPLPVRALWGVGPATAERLRKIGATTVADLRTLSLTELTTVVGASYGTTLYAIA 243 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 RG+ + + + ++ E + D ++ + R + ++R + R I+ Sbjct: 244 RGQDDRDVST-DREMKSVSVEDTYAEDLLDPATITAHMDDLVTRLSTRIRKAGRSGRTIT 302 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL----DAIWQAGHRYQKAGV 345 ++ F S S PT D I A R L A Q+ + GV Sbjct: 303 IKVRGHDFT------TVSRSETTPNPTDDLTTIRAATHRMLPGAVAAATQSVPGIRLLGV 356 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 L AQ++LF E L ++ Sbjct: 357 GLTGLAE--WAQVDLFTAA------EDLDAALE 381 >UniRef50_C3Y6K1 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3Y6K1_BRAFL Length = 1191 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 75/414 (18%), Positives = 138/414 (33%), Gaps = 72/414 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-------------------------- 34 + D++ F+ S P+L GKPV V + Sbjct: 380 VVMHLDMDCFFVSVGLRNHPNLRGKPVAVTHSKGKGHEQKIRPGMDPEYERAYWEKRAPH 439 Query: 35 -------------------------GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVC 69 + + + EA+ GVK G L + Sbjct: 440 RHSITDKTEDNATRGNAQRDTYMSFSEIASCSYEARKAGVKNGMFMGPALKLCPDLKTI- 498 Query: 70 FSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DFGREIRATV 127 ++E Y +++ + L + +E S DEAF D+T + T D +R + Sbjct: 499 -PYDFEGYKEVAQEMYGILASYTHEIEAVSCDEAFVDVTDILADTGATPDDLATVLRKEI 557 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI 187 L++T VG+A + LA++A AK + E +S V ++ G+ Sbjct: 558 LEKTQCPASVGLASSVLLARMATKRAKPNGQFY------LPPEEVLDFVSPQTVRELPGV 611 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQE 246 GR + +L MG+ T DL + +++ F + R RG+ QL+ ++ Sbjct: 612 GRSLESRLKVMGVVTCGDLQKVTLPTLQREFGPKTGQALYRSCRGQDDRQLK-VERERKS 670 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPF 297 + ++G R T + + A +L+ + ++ + S F Sbjct: 671 VSAEINYGIRFTKDTEAETFMYNLAEEVQRRLQKAGLKGKTVTLKVMARKADAPVEPSKF 730 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + S S L T D + I A L + + G+ + Sbjct: 731 MGHGICDSLSKSSTLGLATDDHKVIGKEAWNILCQMKLLPSDNRGLGIQITRLV 784 >UniRef50_B0TZS5 DNA polymerase IV n=14 Tax=Francisella RepID=DPO4_FRAP2 Length = 350 Score = 263 bits (672), Expect = 8e-69, Method: Composition-based stats. Identities = 67/347 (19%), Positives = 131/347 (37%), Gaps = 22/347 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+A E P L KP V N G + N A+ GV+ P Sbjct: 7 IIHIDMDYFFAQVEEKANPSLKDKPFAVGGTNPKRGVISTCNYIAREYGVRSAMPTAIAM 66 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 ++ ++++ Y S + + +VE S+DEA+ D+T V+ T Sbjct: 67 QKCP--NLILLNTDFAKYKATSAVIRDIFYSFTDKVEPLSLDEAYLDVTDVKEYKNSATL 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I+ + +T LT G+A K LAK+A+ K + E+ + Sbjct: 125 IAQAIKQEIFNKTGLTGSAGVAPNKLLAKIASDINKPNGLY------VITPEQVDSFVKD 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV ++G+G+ +KL M ++T LDL + + F RG ++ Sbjct: 179 LPVKKLFGVGKVSQEKLKNMNVETCLDLQQLSLATLVDKFGKFGSSLYNYARGIDNREVN 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + ++ E + + + + + + ++ EH I +K + Sbjct: 239 PV-RIRKSVSVENTYLEDLKTLEACLEKLPNLYNKLTSRMTEEHYK-SIIGIVVKFTDTK 296 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 N+ S+ + T D + + N + + + G+ Sbjct: 297 FNKT------SLTRVAKTLDKKVLKNLIIEL---HQKQNYHIRLIGI 334 >UniRef50_Q2LSC9 Nucleotidyltransferase/DNA polymerase protein n=2 Tax=Syntrophus aciditrophicus SB RepID=Q2LSC9_SYNAS Length = 435 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 103/397 (25%), Positives = 168/397 (42%), Gaps = 18/397 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+ SCE P+L GKP ++ G V + AK GV G P + + + Sbjct: 15 ILHIDGDAFFTSCEEAIHPELRGKP-IIAGGERGIVACASYAAKKQGVMRGVPLHQARKM 73 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL--TDF 119 G+V S+YE Y+ S R+ + + +P+VE YSIDEAF D+TG+R Sbjct: 74 CP--GLVILPSDYETYSLFSRRMFNVMRRFTPQVEEYSIDEAFADITGMRRPLRASYETI 131 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 I+ + + +TV VG++ TK LAK+A+ K + + L Sbjct: 132 AVNIKNEIARELGITVSVGLSITKVLAKVASKHRKPNG------FTCIPGKSIAIYLEHL 185 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL-E 238 PV+ +WGIG + L MG++T L+ A ++K F RELRG+ + Sbjct: 186 PVEKIWGIGHATASYLHKMGVRTALEFARLPEVLVKKRFTKPGVEIWRELRGDSVYPVCA 245 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E I +++F D + + A K R H I+ F+K + F+ Sbjct: 246 EEKSLYASISKTKTFSPASGDADYLFAHLMRNLESACIKARRYHLAASRIAAFLKRNDFS 305 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 ++L P+ ++ A +++ G Y+ G++L + Q Sbjct: 306 YAG------REIRLNRPSVYPLELSIALRNLFIDVYRPGTLYRSTGIVLLELSGDSGTQY 359 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 LFDD + V D + AK G+ +L+ Sbjct: 360 TLFDDVVRADRVRDIYRVTDEVGAKYGKHSLHLGASH 396 >UniRef50_B7S1R7 ImpB/MucB/SamB family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S1R7_9GAMM Length = 359 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 79/372 (21%), Positives = 136/372 (36%), Gaps = 28/372 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D ++FYAS E P L +PV V + G + N EA+ GV+ P + Sbjct: 6 IIHVDADSFYASVEMREDPSLAARPVAVGGSAQRRGVIATCNYEARKFGVRSAMPSSRAL 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L G++ S+ ++LY ++S + ++ + ++E S+DEA+ D++ T Sbjct: 66 QLCP--GLIILSARFDLYREVSQQFHQIFKDYTDKIEPLSLDEAYLDVSDCEQFHGSATL 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++IR + Q +LTV G+A K LAK+ + K E + + Sbjct: 124 IAQDIRRRIKQELNLTVSAGVAPNKFLAKVGSDWDKPDG------CFTITPEDVAEFVVD 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G + KL+ +G T +L + + K F R + G ++ Sbjct: 178 LPVSRINGVGAVTAAKLEKLGATTCGELQSIPLEVLVKRFGKYGSRLAKVAHGLDDRDVQ 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS--EHQYCRFISTFIKTSP 296 ++ I ++ I M QA+ + E +K Sbjct: 238 TSRT-RKSISVENTYHSDIEQLQQMDQALTRLLDELEGRFHKIEERYRPHKRFVKVKFDN 296 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIIN--AATRSLDAIWQAG-HRYQKA--GVMLGDFF 351 F +N A L + WQ G + G+ L Sbjct: 297 FEQTTIEEII---------PDSGEHWLNEKAYHALLHSAWQRGSRPVRLLGAGLRLEPLH 347 Query: 352 SQGVAQLNLFDD 363 + QL LF Sbjct: 348 KEMEMQLVLFSQ 359 >UniRef50_Q0EYF1 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYF1_9PROT Length = 410 Score = 263 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 107/393 (27%), Positives = 175/393 (44%), Gaps = 16/393 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AFYASCE P L G+P+ VLSN++ VIA++ +A+ALG++ G P ++ + + Sbjct: 10 IAHVDCDAFYASCEAARHPKLRGRPICVLSNHNAMVIAKSYDARALGIRTGTPVWEARRM 69 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDF 119 + ++ Y +S ++ S L SP VE+YSIDE F D G+R + Sbjct: 70 APH--AAFLTPDFRYYGQISQQMFSILRRYSPVVEVYSIDEGFIDFNGIRQLWKKTYREL 127 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIR V +TV VG++ ++TLAK+A+ K V + ++ ++ L Sbjct: 128 ADEIRHAVWHELGITVSVGVSVSRTLAKMASEHHKPNG------VTVVPVQAIATFLAEL 181 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V ++ GIGR + L I+T L A D R +++ + EL G L LE Sbjct: 182 GVGEIPGIGRSRAALLCRKDIRTALQFARADERLLQRLIGRHGQMLRHELNGRAILTLEC 241 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P + + + S G + + +A R L ++ + F+ F Sbjct: 242 EPPLPKSMAKTASMGRISEKRRVIAAYLGYHALRLVADLVAKQLLVSRLYLFLTLESFEC 301 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 G L PT + I A +L ++ G RY+ GV+ + AQ + Sbjct: 302 RGLEVG------LDLPTNSLKRINGAVHHALGRLFIEGERYRGCGVVATQLQREAHAQPD 355 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 LF +QLM ++ +N + G + A Sbjct: 356 LFGLMREDLRQQQLMQAVNAINRRFGEQAISTA 388 >UniRef50_Q2RNH1 DNA-directed DNA polymerase n=5 Tax=Alphaproteobacteria RepID=Q2RNH1_RHORT Length = 421 Score = 263 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 142/372 (38%), Gaps = 20/372 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D +AFYAS E P L +P++V G A+ G + P FK + Sbjct: 38 IAHIDCDAFYASVEKRDNPSLRDRPLIVGHPGGRGVATTACYIARRFGARSAMPMFKCLE 97 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L V + Y +S +V + + E + R+E S+DEA+ DL+ G Sbjct: 98 LCPE--AVVIPPDMAKYKAVSAQVRAIMLEATHRLEPLSLDEAYLDLSEGEHRFARPPAV 155 Query: 120 -GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I V + +TV +G++ + LAKLA+ K + + L++ Sbjct: 156 SLATIARRVEREIGITVSIGLSSNRFLAKLASDMNKPQG------FTVIDEAEAPALLAP 209 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 +PV + G+G ++L +G+ T+ DL + F + G + Sbjct: 210 MPVKRLHGVGAATERRLAELGLHTIGDLQGRPEADLLARFGKIGRALHAHAWGRGGRTIS 269 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + I +F ++ P + +A+ + R A L + +KT F Sbjct: 270 P-DRETKSISAETTFERDLSRLPDLARALGPLSERVARALTRNALAGATVVLKLKTHDFR 328 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-Q 357 + + +L PT + I AA R L+ G R++ GV + D A Sbjct: 329 I------LTRHARLGDPTARAEVIAGAARRLLERETD-GRRFRLIGVGMADLRPGSEADP 381 Query: 358 LNLFDDNAPRPG 369 +LF + P Sbjct: 382 PDLFARSPPTAR 393 >UniRef50_Q2SS65 ImpB/MucB/SamB family protein n=3 Tax=Mycoplasma mycoides group RepID=Q2SS65_MYCCT Length = 408 Score = 263 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 79/410 (19%), Positives = 160/410 (39%), Gaps = 20/410 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ASC + P+L KP+V+ S + + A + EA+ +K P FK K Sbjct: 6 IIHIDMDAFFASCMQLKHPELKNKPIVISNSFDKSIISAASYEARKYNIKAAMPLFKAKK 65 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L+ ++ ++ +++S+++ ++ + ++EI SIDEA+ D++ + D+ Sbjct: 66 LYP--KIISIRADMNFISNISSQIWEFIKTNYTNKIEIASIDEAYLDVSDLILNIDVLQL 123 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + I+ + +LT +GI + AK++ K L+ + + + + Sbjct: 124 AKNIQKDIYNHFNLTCSLGIGFNRFSAKMSTSLNKPNGI------TLTTITNFKHNIWPI 177 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P++ ++G+G K L+ IKT+ DLA I + N E G + Sbjct: 178 PINKMYGVGESSIKILNHTKIKTIKDLALLSDAQIYELLNKKGLVLKNEALGLGSDYINY 237 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT----S 295 + + I + I Y + I + + KL C+ I I+ Sbjct: 238 LSSEYKSISKETTLNTPIYQYDEIETIILNLSKFITNKLVKNQLLCKTIEIKIRYKIDEK 297 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F + + L T D I N+A +++ GV + + Sbjct: 298 IFDKQKHLTSKHKQITLKNHTNDLEKIYNSAIDCFYNLYEQNKGILLIGVGVSKLIHKNQ 357 Query: 356 AQLNLFDDNAPRPGSEQLMTVMD------TLNAKEGRGTLYFAGQGIQQQ 399 + L +N +Q+ + +N K + ++ A + Sbjct: 358 NWVQLDINNQINIDKKQIDNALKIENMIFNINKKFKKPVIWKAKDLKKSS 407 >UniRef50_C8V695 Deoxycytidyl transferase (Eurofung) n=2 Tax=Emericella nidulans RepID=C8V695_EMENI Length = 1139 Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats. Identities = 67/395 (16%), Positives = 127/395 (32%), Gaps = 39/395 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D + F+A+ T+ P+L GKPV + + + N A+A GVK G Sbjct: 342 IMHVDFDCFFAAVSTLKHPELEGKPVAIAHGTGTGSEIASCNYVARASGVKNGMWMKGAL 401 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-- 117 V ++ Y + S + + + V+ SIDEA D+T + + Sbjct: 402 QACPDLRV--LPYDFPAYEEASRKFYRAILGIDGLVQSVSIDEALVDITTICLEAGGSEG 459 Query: 118 ----------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + ++RA + + T V VGI AK+A AK + Sbjct: 460 KGVSEGSIYREQAKADEVAEQLRAAIKRETGCAVSVGIGGNILQAKVALRKAKPAGQFQ- 518 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 + + LPV ++ G+G +S KL+ +G+K V D+ D + Sbjct: 519 -----LKPDAVLDFIGELPVQNLPGVGYSLSAKLEDLGVKIVKDIRDLSREKLSSSLGPK 573 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG ++ ++ + ++G R + S +L Sbjct: 574 TGAKLADYARGIDRTEVGNEVT-RKSVSAEVNWGIRFVTQDQAEDFMRSLCEELHRRLVE 632 Query: 281 EHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ + + + SV L T + + A L Sbjct: 633 NLMKGQQLTLKVMRRALDAPLEAVKHLGHGKCDVFNKSVILGIATNAADVLGKEAIAMLR 692 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 ++ + + GV + Sbjct: 693 SLAISPGDLRGLGVQMTKLEPLKSTSEKSDGSQQQ 727 >UniRef50_D1YPB9 Putative DNA polymerase IV n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YPB9_9FIRM Length = 510 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 93/469 (19%), Positives = 168/469 (35%), Gaps = 79/469 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + P+ G PV+V ++ G V + EA+ GV P + K Sbjct: 5 IMHVDMDAFFASIEQLDHPEYKGHPVIVGGLSSRGVVATCSYEARKFGVHSAMPISRAKK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDF 119 L V + Y ++SN++ S ++E +P +E SIDEAF +++G+ Sbjct: 65 LCPDGIYVY--PRMDRYKEVSNQIFSIMKEFTPYIEPLSIDEAFLEVSGMSTMYSGPKAL 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 GR I+ V ++T L + G+A K LAKLA+ K + + R+RK+++ L Sbjct: 123 GRAIKDRVFEQTGLIISAGLAPNKFLAKLASDLDKPDG------LVVIPYGRERKVLAPL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR-FIRKHFNVVLERTVRELRGEPCLQLE 238 P+ +WG+G R K L A G + + + +R G + Sbjct: 177 PIKRIWGVGPRTEKILKAGGFHLMRHIQSLPDESTLIPLVGNQAKRIWELANGIDDRPV- 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E Q I ++ E +T+ ++ +A R +++LR Y +S ++ F Sbjct: 236 ETDRKTQSIGAEETYEEDLTEGRAIELEFRYFANRLSKRLRRRSLYGHTVSIKVRYDDFT 295 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA---------GHRYQKAGVML-- 347 S +L TP+ A + + Q + G + Sbjct: 296 ------TVSRQKRLDTPSDHEHVFFETALLLWNKLMQDKMSKNPKGTKKDVEALGATMKV 349 Query: 348 ---------------------------------GDFFSQGVA---------------QLN 359 G + Sbjct: 350 KSTDFRYSSSKDNRSNHIGSKYSTSKYSSSSEITFMDPPGPIRLLGLTVSGLDEEVPMQD 409 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG--QGIQQQWQMKRAM 406 ++ ++L +V+D+L +K G + Q ++R Sbjct: 410 SLFESPQDKTEDKLSSVLDSLESKFGETAVMSGALWQRFHGDNGIRRKR 458 >UniRef50_A2QTI4 Contig An09c0050, complete genome n=9 Tax=Eurotiomycetidae RepID=A2QTI4_ASPNC Length = 1165 Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats. Identities = 75/408 (18%), Positives = 137/408 (33%), Gaps = 39/408 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D + F+A+ T+ RP+L GKPV V + + N EA+A G+K G Sbjct: 374 IMHVDFDCFFAAVSTLKRPELQGKPVAVAHGTGSGSEIASCNYEARAHGIKNGMWMKGAL 433 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG---------- 109 VV ++ Y + S + S + + V+ SIDEA D+T Sbjct: 434 QTCPELKVV--PYDFPAYEEASRKFYSAILSVDGIVQSVSIDEALVDITTQCLEAGGSDG 491 Query: 110 --------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + E+RATV + T V VGI LAK+A AK + Sbjct: 492 RGISEGSLYREQARADEIADELRATVKKETGCAVSVGIGGNILLAKVALRKAKPAGQFQ- 550 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 + + L V D+ G+G + KL+ +G+K V D+ D + Sbjct: 551 -----LKPDAVLDFIGNLTVQDLPGVGYSLGTKLEDLGVKLVKDVRDLTRDRLTTSLGPK 605 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG ++ ++ + ++G R + + S +L Sbjct: 606 TGVKIWEYARGIDRTEVGNEVL-RKSVSAEVNWGIRFVNQTQAEDFVRSLCQELHRRLVE 664 Query: 281 EHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ + + + SV L T + + A L Sbjct: 665 NLVKGQQLTLKVMRRALDAPLEPVKHLGHGKCDVFNKSVVLGVATDAADILGKEAVAMLR 724 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 ++ + + GV + + + + + ++ Sbjct: 725 SMNLSPGDLRGLGVQMTKLQHLQTSSPSKSGQRQLNFKASPVRKSIER 772 >UniRef50_C0S277 DNA polymerase IV n=5 Tax=Onygenales RepID=C0S277_PARBP Length = 1161 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 59/381 (15%), Positives = 123/381 (32%), Gaps = 39/381 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+L +PV + + + N A++ G+K G Sbjct: 368 IMHVDFDSFFAAVSIRKHPELADQPVAIAHGTGPGSEIASCNYPARSFGIKNGMWMKGAL 427 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-- 117 + + ++ Y + S + + V+ SIDEA D+T + + Sbjct: 428 QMCP--NLKVLPYDFAAYEEASRNFYEVILAIDGIVQSVSIDEALVDITNICLDAGGSDG 485 Query: 118 ----------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + +++R +V ++T + VGI A++A AK + Sbjct: 486 IGISEGSIYREQAKADEIAQKLRDSVKEQTGCNISVGIGGNVLQARVALRKAKPAGQFQ- 544 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 + + + L V D+ G+ + KL+ +G+ V D+ + + Sbjct: 545 -----LKPDAVQDFIGELTVKDLPGVAHSLGGKLEELGVVFVKDIRELSKEKLTSSLGPK 599 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG ++ ++ + S+G R + + S +L Sbjct: 600 TGAKLWNYARGIDNTEVG-IQVPRKSVSAEISWGIRFVSQTQAEEFVQSLCDELHRRLVE 658 Query: 281 EHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ I + + SV L T S I A L Sbjct: 659 NLVKGKQLTMRIMKRSADAPLEPVKHLGHGKCDTFNKSVALGVATNASDIIGREAISILR 718 Query: 332 AIWQAGHRYQKAGVMLGDFFS 352 + + GV + Sbjct: 719 GFKFSPGDLRGLGVQMTKLEP 739 >UniRef50_D0NDK9 DNA repair protein REV1 n=1 Tax=Phytophthora infestans T30-4 RepID=D0NDK9_PHYIN Length = 943 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 74/389 (19%), Positives = 136/389 (34%), Gaps = 27/389 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + D++ F+ + +P+L PV V +++ + + N A+A GV G Sbjct: 256 VILHVDMDCFFVAVAVRDKPELQDVPVAVAHSSNAGSSEISSCNYSARAKGVGAGMFMQT 315 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 K+L ++ ++ +S ++ +P V+ S DEAF + Sbjct: 316 AKELCPE--LIVLPYQFDDIQRVSFQIYDIFFSHTPYVQAVSCDEAFLEF---EKGTKGM 370 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + IR + ++T VG++ LAKL++ AK +S+ + ++ M Sbjct: 371 EKANAIRQEIFEQTGCPASVGVSFNILLAKLSSKKAKPDGVYA-----ISDPSQAKEFML 425 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQ 236 L V D+ G G + KL+A+G++ L + + ER RG Sbjct: 426 QLKVRDLPGAGHMTAAKLEALGVEDARQLVSMTRTELVQSLGKAAGERLFNYARGVDMRP 485 Query: 237 LE-EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK-- 293 L E ++ + +FG R + + + + +LR+ + ++ IK Sbjct: 486 LSMESNMMRKSVSAVVNFGIRFDKWEDATVFLMALGEELSHRLRNLKVRTKCLTLLIKKR 545 Query: 294 -------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 S F + S S L PT D I A L + + GV Sbjct: 546 AEGAPIEPSKFMGHGVCDNFSKSQILAQPTDDEVVIGKACIELLRQLNFPSEDLRGVGVQ 605 Query: 347 LGDF---FSQGVAQLNLFDDNAPRPGSEQ 372 LF + Sbjct: 606 ATKLISDAPSKKKSGQLFKAWLEDSAQQS 634 >UniRef50_UPI0001C34BBE DNA-directed DNA polymerase n=3 Tax=Neisseria subflava NJ9703 RepID=UPI0001C34BBE Length = 344 Score = 261 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 151/346 (43%), Positives = 212/346 (61%), Gaps = 5/346 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D N+FY SCE VFRP+L P+VVLSNNDGCV+AR+ EAKALG+KMG+P+F+ K Sbjct: 1 MFALIDGNSFYCSCERVFRPELKNVPIVVLSNNDGCVVARSTEAKALGIKMGEPYFRVKH 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + +SSNYELYAD+S R+M T+ P VE+YSIDE F D++G+ N T+ G Sbjct: 61 LVSQGRLKAYSSNYELYADLSRRMMETIAGCVPAVEVYSIDECFADMSGIENL---TELG 117 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER--QRKLMSA 178 +IR VLQ + VGIA TKTLAK NH AK++ GVV + + + + + Sbjct: 118 CQIRQRVLQWVGIPTCVGIAPTKTLAKFCNHLAKRYPDHFRGVVVWGDWNETIRLRALRS 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 VD++WGIGRR + KL GI+T LD + D IR+ + V +ERT RE++G C L Sbjct: 178 QGVDEIWGIGRRTADKLSEQGIRTALDFVEADTATIRRRYGVTVERTQREMQGIVCDGLH 237 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 A +Q ++ SRSFG RI +++ A+ + + AE LR + +S F+ T F Sbjct: 238 PNAQPRQNLVRSRSFGTRIETLEALQAAVTHHVSLGAEALRKDGLTASAVSVFLHTDFFR 297 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 +EP Y NS + L+ T D+ + A R L I+++G+ Y+K Sbjct: 298 EDEPQYHNSLAQNLIVSTADTVHLNRIAQRLLADIYRSGYLYKKMR 343 >UniRef50_B2VS10 DNA polymerase IV n=3 Tax=Pleosporineae RepID=B2VS10_PYRTR Length = 878 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 69/395 (17%), Positives = 127/395 (32%), Gaps = 39/395 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+ KP VV + + N A+ GVK G + + Sbjct: 390 ILHVDFDSFFAAVSLKKHPEYKDKPAVVAHGQGSGSEIASCNYPARTYGVKNGMWMKRAQ 449 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-------- 111 +L + ++ Y + S + V+ SIDEA D++ + Sbjct: 450 ELCPDLKI--LPYDFPAYEETSRAFYDVILSTGGLVQSVSIDEALVDVSNLCISVGGSDG 507 Query: 112 ----------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + +R V RT V VGI LAK+ AK + Sbjct: 508 KAHSEGSVYREQAKANEIALNLRDEVRSRTGCNVSVGIGGNILLAKVGLRRAKPAGQYQ- 566 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 E + L V D+ G+ I KL+ +GIK V D+ + + + Sbjct: 567 -----IKPEEALDFIGQLQVQDLPGVAWSIGGKLEGLGIKLVKDIRELTKEKLIQTLGPK 621 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 E+ RG ++ E ++ + ++G R + + I S ++LR Sbjct: 622 TGEKLYEYSRGIDRQEVGEQV-VRKSVSAEVNWGVRFENQEQADEFIASLCGELQKRLRK 680 Query: 281 EHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 E + + + S + ++ S+ L T S + A + Sbjct: 681 EKVKGKQFTMKVMRRSPDAPLDPSKHLGHGKCDTHNKSILLGVATNSSEVLTKEALAIVR 740 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 + G+ + D + Sbjct: 741 GFAFTPGELRGIGIQMTKLELMKSPTDGSLDGSQR 775 >UniRef50_Q46L62 DNA-directed DNA polymerase n=2 Tax=Prochlorococcus marinus RepID=Q46L62_PROMT Length = 425 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 146/423 (34%), Positives = 231/423 (54%), Gaps = 6/423 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D N FYASCE + P + GK +VVLSNNDGC+IAR++EA+ +G+ MG P+FK K+ Sbjct: 4 VILQIDGNNFYASCEQMIDPSIKGKGLVVLSNNDGCIIARSSEARRMGIPMGQPYFKLKN 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + + SSNYELY D+SNR+M L + +EIYSIDEAF + + L +G Sbjct: 64 KLNQLNINVRSSNYELYGDISNRLMQLLRKNCEELEIYSIDEAFGTIKRP-KEKCLYKWG 122 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +++RA V Q + + +GI +TK L+K++NH AKK + G+ D+ +E + + + Sbjct: 123 KDLRALVYQNIGIPISIGIGETKVLSKISNHLAKK-IQTNSGIFDIGRVENKDHYLDLIN 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 VD VWGIG+R+SK L GI +L D I+ + VV R EL+G C+ ++E Sbjct: 182 VDKVWGIGKRMSKWLKDRGITNARELRDMSSDQIKGKYGVVGLRIQNELKGNLCIPIKEN 241 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + ++EI SRSF I + QAI Y A+ KLR +Q I+ F T+ + + Sbjct: 242 SSDRKEICVSRSFAHPIDSLDDLSQAIIKYVLIASAKLRKYNQLSSAITVFTNTNTHSKD 301 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 ++ + A+ K+ PT +S+ +I + I++ + KAGV+L S Q + Sbjct: 302 --FFRSEATEKISVPTSNSKIMIEKSLSLTKEIFKPYKNFIKAGVILHKLQSNQYKQNLI 359 Query: 361 FDDNAPRPG--SEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 FD + ++L V+D +N+K G T+ + + +W +R LS TT ++ Sbjct: 360 FDAQNIKEELYLQRLDNVIDNINSKNGIDTINWGSSMMDTEWSPRRKNLSSIKTTNIENI 419 Query: 419 LRV 421 + Sbjct: 420 PTI 422 >UniRef50_UPI000186DDA3 terminal deoxycytidyl transferase rev1, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186DDA3 Length = 752 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 73/432 (16%), Positives = 146/432 (33%), Gaps = 63/432 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 ++ D++ F+ S P L G+PV V + Sbjct: 212 IYMHIDMDCFFVSVALRNYPHLKGQPVAVTHSKINFGANNSLIETKLNLAVENLDSLKLK 271 Query: 34 -------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADM 80 + + + EA+ GV G L + S +++ Y ++ Sbjct: 272 SDEGVNQESKAFSMSEIASCSYEARKAGVCNGMYLGSALKLCPNLKTI--SYDFKGYKEV 329 Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVG 138 S + +T+ E + +E S DE + D T V + + F +R + ++T T VG Sbjct: 330 SFMLYNTVAEYTLDIEPVSCDELYIDCTSVLSQIKINPIKFANILRQEIEEKTKCTSSVG 389 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 I++ K LA+LA AK E+ + + + + DV GIGR I L + Sbjct: 390 ISENKLLARLATKKAKPNGVFF------LTPEKVEEFIKKVSIYDVPGIGRNIGGILKKL 443 Query: 199 GIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 ++T DL + + F+ K + + RG ++ ++ + ++G R Sbjct: 444 SVETCEDLQNFSLSFLMKTLGSKIGKNLYDHCRGIDDRKINC-NFERKSVSAEINYGIRF 502 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT---------SPFALNEPYYGNSA 308 D + + +++L + + I+ I + + + S Sbjct: 503 NDNEETEIFLKELSQEVSKRLVNIKMAGKNITLKIMFRAKDAPIEAAKYLGHGLCDVISR 562 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 SV L + D I N + + + G+ + S + Sbjct: 563 SVTLPQASNDENIIANNVINLYHLLNIPPNELRGIGIHVNKLDSINKLSRKIQSYFEIGK 622 Query: 369 GSEQLMTVMDTL 380 ++ D + Sbjct: 623 NLKKCD--CDRI 632 >UniRef50_B8GPZ5 DNA-directed DNA polymerase n=2 Tax=Gammaproteobacteria RepID=B8GPZ5_THISH Length = 414 Score = 260 bits (663), Expect = 8e-68, Method: Composition-based stats. Identities = 88/405 (21%), Positives = 159/405 (39%), Gaps = 24/405 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 L D+NAF+AS E + P+L G+PV + C+I + EA+A GV+ G + + Sbjct: 9 IVLVDMNAFFASIEQLDHPELRGRPVGITNGQTGTCIITSSYEARAHGVRTGMRLKEARQ 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-F 119 L ++ + E YA +S +M+ LE ++P +E++S+DEAF D+T + + Sbjct: 69 LCPD--ILQIPARPERYARVSTDIMTALESVTPDLEVFSVDEAFLDVTHCQRLLGPPEVI 126 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R ++ TV + + L VG++ KT AK A K + + ++ + Sbjct: 127 ARRVKDTVREASGLPCSVGMSGDKTTAKWAAKQHKPDG------LTVIPPWEAAARLAPV 180 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV ++ GI I L+ G+ T D+A + + + F + R +G +E Sbjct: 181 PVTELCGIAGGIGGYLEQRGVYTCGDMAQLPVSELARRFGNLGRRIWLMAQGRDPTPVET 240 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + + + + + A + +LR ++ Sbjct: 241 RIAPPRSLGHGKVMPPGTRERAVILTYLEHMAFKVGTRLRRHDLLALRFFIGLRADYG-- 298 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + T DSR + R L+ W +G + + + L Sbjct: 299 -----WIGGTYRTAVATDDSRQLNALCRRMLNEHW-SGEGVSQVQITALEPCPAAGQ-LE 351 Query: 360 LFDD-----NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 LFD A + VMD +N + G TL A + Sbjct: 352 LFDAGQAPGAADQARVRAAHGVMDAINRRYGEFTLAPARLLSRSD 396 >UniRef50_B1MZW7 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=3 Tax=Leuconostoc RepID=B1MZW7_LEUCK Length = 361 Score = 260 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 75/365 (20%), Positives = 138/365 (37%), Gaps = 21/365 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYA E P+L +P+++ + G V N A+ALGV Sbjct: 13 ILHVDIDAFYAQVEMRDNPELRNRPLIISRDPAETGGRGVVATANYVARALGVHSAMSAV 72 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + + L V S N++ Y +S + + ++E ++DEA+ D+T Sbjct: 73 EARQLAPEG--VFLSPNFKKYRQVSKTIHHIFHTFTEKIEPVALDEAYLDMTDSH--LSG 128 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +IR +L+ T LT +GI+ K LAKL + K V + + + Sbjct: 129 ASIAAQIRHQILKETGLTSSIGISHNKLLAKLGSEFNKPNG------VTVITHDNMLSFL 182 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 + LP+ D G+G + K A+ ++ L L +R F + E + RG + Sbjct: 183 AELPIGDFRGVGAKTKAKFSALKVENGLQLRQLPKETLRGLFGKMGENLYWQTRGVHFGE 242 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 ++ +Q + +F I + + +A A L+ + R ++ I+ Sbjct: 243 VQWQ-RQQQSVGKEATFRYFIHNEIDVHKAFKQLANEMIAALKVKQLTGRTLNIKIRDDA 301 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F L I A + + Q + G+ + + S Sbjct: 302 FNTITRAITRETPWPL-----SETLITQTAQSVFEEVIQTPFSVRLLGLSISNLQSSTFE 356 Query: 357 QLNLF 361 ++ LF Sbjct: 357 EMTLF 361 >UniRef50_B9XRF0 DNA polymerase III, alpha subunit n=1 Tax=bacterium Ellin514 RepID=B9XRF0_9BACT Length = 1420 Score = 260 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 84/411 (20%), Positives = 156/411 (37%), Gaps = 24/411 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+AS E L GK + V G + + + EA+ GV P + + L Sbjct: 13 IVHLDADAFFASVEQAADARLRGKAMAVGGEKRGIIASASYEARKFGVYTPMPTVRARKL 72 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 ++ ++E Y S + S + +P VEI SIDE + DLTG R + Sbjct: 73 CP--KLIIVPGDFEKYERFSRWMFSYAYDFTPEVEISSIDEGYFDLTGARK--SPLEIAE 128 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 IR + +TV GIA K ++++A+ K + + + LP Sbjct: 129 IIRGAIRGALKITVSEGIACNKLVSQIASKLNKPAAFKQVPLGGEIP------FLHPLPN 182 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 + G+G + KL+A G+ + +A T + ++ + G L + + Sbjct: 183 KWLPGVGPTTATKLNAAGLIRIGHIAKTPLDLLQLLMGNMARSLKEFADGIDERPLIQES 242 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 + +FG TD + + A ++R++ + R ++ ++ + A ++ Sbjct: 243 EPAKSYGHQETFGVDQTDEEFIEATLKRMADSLMAQVRADDKTIRTLTVKVRYNDMAEDQ 302 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA-QLNL 360 LL PT DI + W+ + + L + +S +L L Sbjct: 303 AGES------LLEPTDLETDIYGRIRVLMKQAWRRRVSLRMVSLRLSNVYSGIFRAELAL 356 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 +L + +D L G+ + +Q++ A SP Y Sbjct: 357 ERSAEQHEAKRRLASAVDQLRQSRGKQVILRG-----HDFQLREA--SPDY 400 >UniRef50_Q9AK82 DNA polymerase IV n=34 Tax=Bacteria RepID=DPO4_STRCO Length = 479 Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats. Identities = 97/379 (25%), Positives = 148/379 (39%), Gaps = 23/379 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E +P L GK VVV G V + EA+ GV P + + Sbjct: 7 ILHLDMDAFFASVEQASKPSLRGKAVVVGGLGPRGVVATCSYEARVFGVHSAMPMGQARR 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF- 119 L + +ELY +S +VM L ELSP VE S+DEAF DL RD Sbjct: 67 LAPHAAYLV--PRFELYRSISEQVMRLLRELSPLVEPLSLDEAFVDLDAGGAARDAETAR 124 Query: 120 --GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 G ++R + T LT VG+A +K LAK+A+ AAK + L +R ++ Sbjct: 125 LAGTKLRTDIRTVTGLTGSVGLAASKMLAKIASEAAKPDG------LVLIPPGTERAMLE 178 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQ 236 + V + G+G L GI TV ++A+ + + Sbjct: 179 PMTVRTLPGVGPATGDHLRRAGITTVGEIAEAGEDELVRLLGKAHGHALYAMALARDERP 238 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + + ++ I D + + A R +LR+ R I ++ Sbjct: 239 VV-AERETKSVSVEDTYDVDIHDRVRVGVEVGRLADRCVRRLRASGLSGRTIVLKVRRYD 297 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F+ + S L PT D + AA R LD++ G + GV + Sbjct: 298 FS------TLTRSETLRGPTDDPAVVREAAARLLDSVDTTG-GVRLLGVGVSGLAD--YT 348 Query: 357 QLNLFDDNAPRPGSEQLMT 375 Q +LF A E Sbjct: 349 QEDLFAQAAGDRAEEPAEE 367 >UniRef50_B9X9L4 DNA-directed DNA polymerase n=3 Tax=Verrucomicrobia RepID=B9X9L4_9BACT Length = 368 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 78/348 (22%), Positives = 130/348 (37%), Gaps = 25/348 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AFYAS E P+L GKP++V G V A + EA+ GV+ P Sbjct: 4 VIFHLDMDAFYASVEQRDNPELRGKPLIVGAPPTQRGVVCAASYEARKFGVRSAMPSVVA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN------ 112 K L + Y SN++M + +E SIDEA+ DL+ V Sbjct: 64 KRLCPDGF--FIRPRMDHYRAESNQIMQIVAASGAIIEQVSIDEAYLDLSPVCQRSDLDS 121 Query: 113 -CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 +++ + LT +GIA K LAK+A+ K + L Sbjct: 122 SLLSAVPLAAQLKDKIFSERGLTTSIGIASNKLLAKIASDFNKPNG------LTLIPERD 175 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + +P+ + G+GR + L G++T+ DL D +R R G Sbjct: 176 KVLFLRPMPIRAIPGVGRVTEEMLKKSGVETIGDLQDFPGD-LRSMVGSFGPTLKRFSFG 234 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 E QL+ + I +F + D ++ + A A KL+ + + I Sbjct: 235 EDNRQLDT-GDVIKSISSENTFLKDTEDRKILKTCLREQAEEIAAKLKRKQIGAQTIQVK 293 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 ++ S F + + + P ++ DI L Sbjct: 294 LRYSDFT------TLTRQLSVEEPITEAADIYRLGCYLLAREKLVSRP 335 >UniRef50_B8M4C5 DNA-directed polymerase kappa, putative n=14 Tax=Leotiomyceta RepID=B8M4C5_TALSN Length = 654 Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats. Identities = 81/369 (21%), Positives = 144/369 (39%), Gaps = 21/369 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+A+ E + RP+L P V G + N A+ G + G F K L Sbjct: 119 VVHVDCDAFFAAVEELDRPELKHLPFAVG---KGVLTTCNYVARKFGCRSGMAGFVAKKL 175 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTDF 119 ++C NYE Y+ + + + + P E SIDEA+ ++T N D + Sbjct: 176 CPD--LICIPQNYEKYSAKAEEIRAIFAQYDPCFESASIDEAYLNITAYCDENNMDPQEA 233 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +++RA + + T +TV GIA LAK+A++ K + E + L Sbjct: 234 VQQMRARIAEETKITVSAGIATNTKLAKIASNQNKPNGQYFIPS----EREAIMSFVKDL 289 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV V GIGR ++L A+GI+T + R + ++ G +++ Sbjct: 290 PVRKVNGIGRVFERELRAVGIETCGQIYPQRALLKRLFGGKAFQFLMQCYLGLGRTKIQP 349 Query: 240 FAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F E I+D ++R + A A+ L R + +K F Sbjct: 350 AEDYERKSVGTESTFAE-ISDPDAIRVKLRWAADELAKDLARTQFKGRTLVLKVKLHTFE 408 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVA 356 + + V + D+ + L + + R + G+ S Sbjct: 409 V------YTRQVAPPKAVWLADDLYTYSLPILAKLQKEIPNMRLRLLGLRCTHLVSTKKV 462 Query: 357 QLNLFDDNA 365 L+ F + Sbjct: 463 GLDFFGFQS 471 >UniRef50_Q6MCK0 Putative SOS mutagenesis and repair protein UmuC n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MCK0_PARUW Length = 393 Score = 258 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 146/395 (36%), Positives = 218/395 (55%), Gaps = 5/395 (1%) Query: 27 VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 +VVLSNNDGCVI+R+ EAK LGVKMG+P+F+ K L + FSSNY LY D+S R+M+ Sbjct: 1 MVVLSNNDGCVISRSQEAKLLGVKMGEPYFQIKALCEFRNIQVFSSNYALYGDISERIMN 60 Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 L E +P ++IYSIDEAF DL E++ V + + + +G+A TKTLA Sbjct: 61 LLFEHAPDLDIYSIDEAFLKYPSSVAPSDLVSLCHELQKKVKKWVGMPISLGLANTKTLA 120 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 K+AN AKK Q V N ++K++ + DVWGIGR + +KL+ M I T + Sbjct: 121 KMANDLAKKIQNFY---VFDLNSSVRQKVLQNYLIGDVWGIGRNLKEKLNGMNIHTAWEY 177 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 A D IRK V+ ER + ELRG CL+ +E K+ ++ SRSFG +++ + +A Sbjct: 178 AQMDPSIIRKRLGVIGERILWELRGVSCLESDEKVS-KKSLLYSRSFGHVLSEITPLSEA 236 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + +Y AEKLR++ + + F++ + +S + PT+D+ ++I AA Sbjct: 237 LSTYVYTVAEKLRAQGSLAKALYIFLEYQIQPGKKMRCYDSITEIFPAPTKDTGEMIKAA 296 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 R L+ I++ RY+K GV+L D + + +LF N P QLM MD LNA+ G+ Sbjct: 297 KRGLNKIFRREERYKKCGVILLDLLPESSSNSDLF-LNPVDPKRTQLMNTMDALNARFGK 355 Query: 387 GTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 L+F G W+ ++ S + L V Sbjct: 356 KKLFFGAMGTDVSWKSRKDCSSKHNPSNWQQLPIV 390 >UniRef50_Q1N612 DNA polymerase IV n=1 Tax=Bermanella marisrubri RepID=Q1N612_9GAMM Length = 366 Score = 258 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 77/369 (20%), Positives = 140/369 (37%), Gaps = 29/369 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D + F+A+ E P P+ + + G + N A+A GV+ P + Sbjct: 5 VLHVDCDCFFAAVEMRDSPQYRDIPLAIGGSSDRRGVISTCNYVARAYGVRSAMPSGQAL 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L ++ + E Y +S VMS +E E SIDEA+ +++ Sbjct: 65 KLCPDLMLI--RGDMEKYRRVSREVMSIVESYGLAFEQVSIDEAYIEISPHSP---GKII 119 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++IR V +TV VGIA K LAK+A+ K + + + + + L Sbjct: 120 AQQIRQQVEAEIGITVSVGIAPNKYLAKVASDWNKPNGQF------VVEPQALNEFVRTL 173 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + G+G + ++KL MGI + D+ ++ + K F ++ RG L Sbjct: 174 PVGKIPGVGPKSAEKLANMGIHSCADVQAIELADLLKRFGQFGKKLYDRSRGIDDRTLS- 232 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS--TFIKTSPF 297 ++ + R+F I ++Q R ++ + R ++ +K + F Sbjct: 233 NGRERKSLSVERTFANDIESEEELQQVAQDLWLRFQSRIEANAIRLRDVTPFVKVKFADF 292 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + +V L ++I A R + + G+ Q + Q Sbjct: 293 QVTTLANHQ-KTVDL----DSFIELIQQARRRQE------KSIRLIGIGAR--LKQNLTQ 339 Query: 358 LNLFDDNAP 366 + LFD Sbjct: 340 MELFDQATA 348 >UniRef50_B4MLB6 GK17515 n=1 Tax=Drosophila willistoni RepID=B4MLB6_DROWI Length = 1022 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 69/441 (15%), Positives = 146/441 (33%), Gaps = 74/441 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S P+L G+PV V + G Sbjct: 275 VMHIDMDCFFVSVGLRLHPELRGQPVAVTHSKGGNAATDVPVHPQADRQAEQELFAQRFE 334 Query: 37 ------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+A G++ G + +L + Sbjct: 335 HLLHDNIRADKVRTGFEKKMSLSEIASCSYEARAKGIRNGMFVGRALELCPELKTI--PY 392 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQR 130 +++ Y +++N + T+ + + +E S DE F +LT + + D+ +F +R V + Sbjct: 393 DFDGYREVANALYDTVAQYTLNIEAVSCDEMFVELTDLVSELQVDVMEFVGHLREEVRSK 452 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T G+ K L+++A AK + L+ M+ ++ + G+G Sbjct: 453 TGCPCSAGVGANKLLSRMATKEAKPNGQFL-----LNPDGDILSYMAPTALESLPGVGSS 507 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPTKQEIIC 249 IS KL G+ D+ + + + + + RG L + ++ + Sbjct: 508 ISHKLKQAGLNNCGDVQKISVEQLETVLGKKMAQTLHQNCRGIDPRPLA-YEQQRKSLSA 566 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALN 300 ++G R T + + + +L+ + + I+ + TS F + Sbjct: 567 EVNYGIRFTKTSECEKFLRQLSIEVHTRLKEVKRTTKSITLKLMVRAAEAPIETSKFMGH 626 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ--- 357 + S L T T D I + L + + G+ L + Sbjct: 627 GVCDVWTKSALLRTGTADVNIITDQVLSLLKQSNLPSNELRGVGIHLNKLEDPTEMKGEN 686 Query: 358 --LNLFDDNAPRPGSEQLMTV 376 +F + + Q + Sbjct: 687 VLKQMFSKISEKKKDNQAEKL 707 >UniRef50_D1C5S0 DNA-directed DNA polymerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5S0_SPHTD Length = 394 Score = 257 bits (657), Expect = 5e-67, Method: Composition-based stats. Identities = 93/387 (24%), Positives = 159/387 (41%), Gaps = 21/387 (5%) Query: 15 ETVFRPDLWGKPVVVLSNNDGCV--IARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 E + RP+L GKPV+V G A + EA+A GV+ P + L V Sbjct: 24 EILRRPELRGKPVIVGGRPGGRGVVAAASYEARAYGVRSAMPIAQAVRLCPHG--VFLPG 81 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-DFGREIRATVLQRT 131 ++ Y ++S R + LE SP VE+ S+DEA+ DL+ + R I+ V + Sbjct: 82 DHAYYRELSGRFRAILERFSPLVEMVSVDEAYLDLSHSERSVGPPLEAARAIKRQVREEL 141 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 LTV +G+A ++ +AK+A+ K + L + ++ LPV+ + GIG + Sbjct: 142 GLTVSLGVATSRLVAKIASDLDKPDG------LRLIEPGAEAVTLAPLPVERMPGIGPKS 195 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 ++L +G+ T+ LA +R F + + RG + + I R Sbjct: 196 VERLQRIGVTTLGGLARMPAAALRPIFGRRADEVIARARGIDPRPVNPEREPAKSIGRER 255 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 +FG+ +TD + +A+ A R LR E R ++ ++ S F + Sbjct: 256 TFGQDLTDRHEIERALYHLAERTGRDLRREGLQGRVVAVKLRYSDFE------TVGRQRR 309 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAG-HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 L PT D ++I A + + + + GV + + DD Sbjct: 310 LPRPTDDHQEIAEVAMDLVARLLEERQAPVRLLGVRVAGLGPAAIQLTMFGDDP---LRR 366 Query: 371 EQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 +L +D L A+ G + A Sbjct: 367 HRLNHALDDLAARYHAGLVIPARVARH 393 >UniRef50_A0YE03 DNA polymerase IV n=2 Tax=Gammaproteobacteria RepID=A0YE03_9GAMM Length = 388 Score = 257 bits (656), Expect = 7e-67, Method: Composition-based stats. Identities = 75/371 (20%), Positives = 139/371 (37%), Gaps = 32/371 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 CD + F+ + E P L+G+PV V + G + N EA+A GV + Sbjct: 31 IIHCDADCFFVAVEMRDDPSLFGRPVAVGGSADRRGVISTCNYEARAYGVGSAMATATAR 90 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L ++ S N E Y ++++ + E S VE S+DEA+ D+TG C T Sbjct: 91 RLCPD--LIVLSGNMEKYKLAASQMRTIFCEYSTLVEPLSLDEAYIDVTGSDACHGSATL 148 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EIR V + +T+ G+A K LAK+ + K + + R + A Sbjct: 149 IAEEIRQRVKESVGITLSAGVAPNKFLAKIGSDWNKPNG------LCVIPPARVDAFVQA 202 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 +PVD ++G+G+ +++L MGI+T DL I + + F R RG ++ Sbjct: 203 MPVDRLFGVGKVTAERLHRMGIQTCGDLRAFSIFQLSERFGSFGSRLYDLSRGIDDRAVK 262 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH-------QYCRFISTF 291 ++ + +F ++ S + + + +L++ + Sbjct: 263 T-GRIRKSLSVEHTFPSDLSAIDSCLEQLPDLFDQLTTRLQTLNDQSKGAAYRVNKQFIK 321 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA--IWQAGHRYQKAGVMLGD 349 IK + F + + ++ + G + G+ + Sbjct: 322 IKFNNFQSTTMECIVAGAPRIA-----------IFRELCRESILRGDGLAVRLMGLGVRF 370 Query: 350 FFSQGVAQLNL 360 + L Sbjct: 371 QDPACDGAVQL 381 >UniRef50_Q98JM5 DNA polymerase IV 2 n=4 Tax=Bacteria RepID=DPO42_RHILO Length = 415 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 91/413 (22%), Positives = 169/413 (40%), Gaps = 32/413 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E + P L GKP+ V G V+A + EA+A GV+ G P K ++L Sbjct: 7 ILHADLDAFYASVEQLLDPSLRGKPIAVGG---GVVLAASYEARAFGVRGGMPGRKAREL 63 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFG 120 + ++ N+ Y + + + L++ +P VE SIDEAF D+ G + D Sbjct: 64 CPQ--LIFVGGNFSHYQRLGDAAIKVLDDFTPVVERISIDEAFADVAGCTHLFGQPRDIA 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IR V L + +G+A+TK LAK+A+ AK + + + + + LP Sbjct: 122 TAIRHRVRAELGLPISIGVARTKHLAKIASQVAKPDG------LVVVDPGTELDFLHDLP 175 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEE 239 V +WG+G +L +GI+T+ +LA T + + E+ +LE Sbjct: 176 VSLMWGVGPATKSRLAEIGIQTIGELARTHSGALTRLLGPAAGEKLAALAWNRDPRKLET 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + G++ + + A R A +LR++ + R ++ ++ + + Sbjct: 236 RRR-AHSAGAQSALGQKPAVARVIVPTLLHLADRVASRLRAKARPGRTVTVRVRFADLSA 294 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFSQGVA 356 + S+ L P + + A + + + + Sbjct: 295 ------VTRSITLDQPISATTMLAEIAGDLVRGVLADHPREKTISLLAISVSHLEESAEL 348 Query: 357 QLNL---FDDNAPRPGSEQ------LMTVMDTLNAKEGRGTLYFAGQGIQQQW 400 QL+L D RPGS++ +D + + G+ + + ++ Sbjct: 349 QLDLPLGLADEKRRPGSKKGLARFGADRAIDKIRERFGKQAVGYGTVALEAAR 401 >UniRef50_C0ZB00 DNA polymerase IV n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZB00_BREBN Length = 350 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 73/358 (20%), Positives = 131/358 (36%), Gaps = 24/358 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + RP+L GKPV+V N G V + EA+ GV+ P + Sbjct: 4 ILHLDIDAFFASVEQLDRPELRGKPVIVGGTGNRGVVSTCSYEARKYGVRSAMPVAMARK 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + Y Y + S V + R + +DEA+ D++ + + Sbjct: 64 KCPQG--YYLPVRYSRYIEKSAEVRQIFTSYTERYQTVGLDEAYLDVS---HYENAVPIA 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R+I+ + + T LT +G++ +LAK+A+ K + E+ ++ LP Sbjct: 119 RDIKRRIKRETGLTCSIGLSYNMSLAKIASDLKKPDA------FVIIRPEQALDVLRPLP 172 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 + + G+G++ + L GI+TV D + F RGE ++ E Sbjct: 173 IGTLHGVGKKSQELLAKKGIETVEDFWRLSLDEATTLFGKFGRSLYYRARGEDNREI-EM 231 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + + + D ++ S E +R E + I+ IK + F Sbjct: 232 DRAPKSSSRETTLPFDLFDRDAIAPIATSLLREVEEDIREEGVEPQTITLKIKYADFTQR 291 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + A D + + GV +F Q + Sbjct: 292 TKQHKAVAGANWQELLDDL-----------LDAFDYTAGVRLVGVGFSNFAEQQGERY 338 >UniRef50_A7E7M1 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A7E7M1_SCLS1 Length = 1255 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 70/395 (17%), Positives = 130/395 (32%), Gaps = 39/395 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+ + KP VV N + + N A+ GVK G Sbjct: 437 IMHVDFDSFFCAVSLKSAPEYFDKPAVVAHGNGTGSEIASCNYPARVFGVKNGMWMKNAI 496 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-------- 111 L V ++ Y + S + ++ + S+DEAF D+T + Sbjct: 497 KLCPDIKV--LPYDFPAYEEASKAFYEAILDVGGIFQSVSVDEAFVDITSLCLAAGGTDG 554 Query: 112 ----------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + G +R + ++T V VGI LAK+A AK + Sbjct: 555 VGIREGSIWREQERAEEIGNALRKVIREKTGCNVSVGIGGNILLAKVALRKAKPAGQYQ- 613 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 E + L V ++ G+ I KL+ +G+K V D+ + Sbjct: 614 -----IKPEEVLDFVGELDVQNLPGVAYSIGGKLEEIGVKFVKDVRQLSKDRLMTVLGPK 668 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 E+ RG ++ E ++ + ++G R + + + +L Sbjct: 669 TGEKIWDYSRGIDRAEVGEQV-VRKSVSAEVNWGIRFISQVEAEEFVQNLCIELQRRLID 727 Query: 281 EHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + R ++ I F + + S+ L T D+ I A L Sbjct: 728 QRVKGRQMTMKIMRKAADAPLDPPKFLGHGNCDTFNKSIVLGVATNDATIIGREAVSILR 787 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 + + + GV + + FD + Sbjct: 788 SYGFSPGELRGLGVQMTKLEPVKSSNGTPFDGSQR 822 >UniRef50_B5TTR9 RumB n=6 Tax=Bacteria RepID=B5TTR9_9BACT Length = 375 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 135/377 (35%), Positives = 204/377 (54%), Gaps = 7/377 (1%) Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLT 108 MG P F+ K+L + + SSNY LYA+MS R + L E EIYSIDE F DLT Sbjct: 1 MGVPLFQLKELVEQHNITVLSSNYALYAEMSRRFIKVLAEFVTPQEQEIYSIDECFLDLT 60 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 + DLT + I + + L +GI +TKT AK+ANH AKK GV +L + Sbjct: 61 AYASNYDLTAYAHLILDRLSRWLGLPACIGIGRTKTEAKMANHIAKKN-SYLKGVCNLVS 119 Query: 169 LER--QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 ++ L ++ V +VWGIGR+ +KKL+++ I TVLD IR F+VV+ RT+ Sbjct: 120 MDYCSIEGLYQSIEVSEVWGIGRKHTKKLNSLSINTVLDFVCASPLMIRDQFSVVMHRTL 179 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 EL+G C+++E+ K++II SRSFG+++ +++AI Y A +LRSE+ C Sbjct: 180 LELQGISCIEIEQSPKAKKQIIASRSFGQKVYSCEDLKEAITLYVQDAVSRLRSENLLCG 239 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 I +F++++PF +EP+Y S S L P+ +S + AT +D ++Q ++K GV+ Sbjct: 240 CIISFVQSNPFDTSEPFYNKSLSYALPDPSDNSLLLSKIATSMVDQLYQKNIGFKKCGVI 299 Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF-AGQGIQQQWQMKRA 405 L + +LF D S +LM +D + K G+ + A + W M R Sbjct: 300 LTCLEPKATHIYDLFTDMNKIESSNKLMDSLDDIQNKFGKRKIGLGASMLPDRNWNMSRN 359 Query: 406 MLSPRYTTRSSDLLRVK 422 LSP Y + L+ VK Sbjct: 360 KLSPNYF-KWDQLMSVK 375 >UniRef50_C5BNY2 DNA polymerase IV n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BNY2_TERTT Length = 360 Score = 256 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 74/368 (20%), Positives = 125/368 (33%), Gaps = 21/368 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D + F+A+ E PDL P+ V G + N A+ GV P K Sbjct: 8 IIHLDADCFFAALEIRENPDLADFPLAVGGDPGRRGVISTCNYLARQYGVHSAMPSAHAK 67 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 L +V SSN+ LY +S ++ S ++E S+DEAF D++ + T Sbjct: 68 RLCPE--LVIRSSNFPLYKQVSAQMFEIFTRFSEKIEPLSLDEAFLDVSDCQQFHGSATL 125 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REIR V +TV G+A K LAK+A+ +K T ++ + + Sbjct: 126 IAREIRRQVETELGITVSAGVAPIKFLAKIASDWSKPNGLFT------VTPDKVTEFVKD 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + G+G+ +KL G+ DL + + F R G +++ Sbjct: 180 LPLQKLPGVGKVTREKLAREGLLYCRDLESYSEHELVQRFGRFGANLKRMSVGIDEREVK 239 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY--CRFISTFIKTSP 296 ++ + +F I+ + I E+ + +K Sbjct: 240 SS-RERKSLSIETTFARDISSPGEIADQIDQLVVGLEERYNKLQRKVAVSKKFVKLKFDD 298 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F S K+ S++ + + GV L Sbjct: 299 FTQTTLESSVSRCGKI----FSSQEFERMCYAAWAR---QKRPLRLLGVGLSFAERSHPQ 351 Query: 357 QLNLFDDN 364 F Sbjct: 352 AQLSFPFA 359 >UniRef50_B1YIX5 DNA-directed DNA polymerase n=2 Tax=Exiguobacterium RepID=B1YIX5_EXIS2 Length = 441 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 99/422 (23%), Positives = 166/422 (39%), Gaps = 28/422 (6%) Query: 2 FALCDVNAFYASCETVFR--PDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFK 57 D +FYASCE +R P L K VV ++A + K LG+K ++ Sbjct: 12 IFCVDSVSFYASCECRYRNLPPLTTKLAVVSDLTRSGSVILAASPALKQLGIKTASRLYQ 71 Query: 58 QKDLF--RRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNC 113 + L R +V Y S V+ L + +P + IYSIDE F D++G Sbjct: 72 IEQLPYRERKQIVLVEPRMLAYMKTSIEVLDVLHQFAPPDAIRIYSIDENFVDMSGTERL 131 Query: 114 RDL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA-AKKWQRQTGGVVDLSNLER 171 T+ +I+ + Q+T + V +GI +AKL K+ G Sbjct: 132 FGSDTETAWKIQTAIWQQTGIPVRIGIGPNNVIAKLVLDLRGKREGIAQCGYA------D 185 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 +L+ PV +WG+GR + + L MGI T+ DLA + + + F V+ G Sbjct: 186 VSRLLHDFPVRKMWGVGRMMEQHLSVMGIHTIGDLAAAPVEDLHERFGVIGAELWHHAWG 245 Query: 232 EPCLQ--------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 TK+ I + Y +R + A+ A ++R +Q Sbjct: 246 IDGSPTIIDPMTLFRTAPDTKRTIGHGVTLMRDYYQYEQIRLVLAELASDVAARVRFSNQ 305 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 + ++ S + G S ++L PT D R ++ + + W G + Sbjct: 306 VGWTVHLGVRYSRHVARD---GFSKQLRLPYPTADERLLLRHILQLFEPNWLDGEPVRFL 362 Query: 344 GVMLGDFFSQGVAQL-NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 V LG +LF+DN ++L+ +D +N + G+GT+ A + Sbjct: 363 SVALGQLTPDQGTLQLSLFEDNTKVWRRKRLLKAIDHVNLRYGKGTIRLAVSFLDTSVAK 422 Query: 403 KR 404 +R Sbjct: 423 RR 424 >UniRef50_C7MBE5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MBE5_BRAFD Length = 422 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 86/405 (21%), Positives = 153/405 (37%), Gaps = 18/405 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIAR-NAEAKALGVKMGDPWFKQKD 60 D++AF+AS E P L G PVVV V+A + A+ G++ P + Sbjct: 16 ILHLDMDAFFASIEVRDDPGLEGLPVVVGGAGARGVVAAASYPARTRGIRSAMPMASARR 75 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDF 119 L +V + Y +S +VM L ++ E S+DEAF D+ G R Sbjct: 76 LAPD--LVIVPPRIDHYRQVSAQVMQLLGDVVAETEQISVDEAFLDVRGARRLFGPPEQI 133 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + +R + + L VG + ++ +AK+A+ AK + ER + ++ L Sbjct: 134 AQLLRRRIREELGLPSSVGGSVSRAVAKIASAQAKPDGM------LIVPAERTAEFLAPL 187 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V + G+G + + L +G++T+ L + + + G L Sbjct: 188 SVAVISGVGPKAQEALARIGVRTIGQLREIPRSTLARALGPRAPEIAALADGSDRTGLGH 247 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 A + + R++ E +TD +R+ I + A A +LR R + ++ Sbjct: 248 RARDR-SLGTERTWDEDLTDPDEVRRRITTMADDVARQLRRSGFVARTVVLKLRAPDGT- 305 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S + PT + + + A R + AGV + A + Sbjct: 306 -----TLTRSSTMDQPTASGERLRSQVIPLWERERPAMPRLRLAGVRVSHLEPGEGAFMQ 360 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 + A G + L T MD + G +L Q +R Sbjct: 361 S-ELTARSAGWQDLETAMDRALERFGSASLGRGSTLSSATDQARR 404 >UniRef50_A3NBC4 DNA polymerase IV n=15 Tax=pseudomallei group RepID=A3NBC4_BURP6 Length = 403 Score = 255 bits (651), Expect = 2e-66, Method: Composition-based stats. Identities = 74/371 (19%), Positives = 132/371 (35%), Gaps = 27/371 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 CD + FYAS E P L G+P+ V G + N +A+ GV Sbjct: 21 IIHCDCDCFYASVEMRDDPSLRGRPLAVGGRPDQRGVIATCNYDARRYGVHSAMSSALAM 80 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 ++ + Y S +M+ + +P VE S+DEA+ D++ C+ T Sbjct: 81 RKCPD--LLILPPAMDKYRAASRLIMAIYRDYTPDVEPLSLDEAYLDVSRATRCQGSGTL 138 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 REIR V +TV G+A K +AK+A+ K + + ++A Sbjct: 139 IAREIRERVRDTVGVTVSAGVAPNKFIAKIASDWNKPDG------LFVVRPHEVDAFVAA 192 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G+G+ + +LD +GI+T L D + + + F R RG + Sbjct: 193 LPVRKLHGVGKVTAARLDKLGIRTCAQLRDWSLFDLHRTFGAFGRRLHELARGIDERPV- 251 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH--QYCRFISTFIKTSP 296 ++ + ++ + + + I ++ + R + I+ + Sbjct: 252 RADQARKSVSVETTYVQDLAALDACAAEIRRLTGLLDARIERAGAARSIRKLYVKIRFAD 311 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 F + D+ D A + + + GV + Sbjct: 312 F-----------QRTTVECVADATDAETAVALLAKGLARRRQAVRLLGVGVRIDEDTAER 360 Query: 357 QLN--LFDDNA 365 LFDD Sbjct: 361 HGQIALFDDED 371 >UniRef50_D1JEL0 DNA polymerase IV n=1 Tax=uncultured archaeon RepID=D1JEL0_9ARCH Length = 363 Score = 255 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 76/363 (20%), Positives = 142/363 (39%), Gaps = 30/363 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-----------DGCVIARNAEAKALGV 49 + D+++F++S E +P L G PV+V G V + EA+ G+ Sbjct: 7 VILHVDMDSFFSSVEEREKPKLKGLPVIVGGKITPEWEKEDSKIRGVVSTCSYEARKYGI 66 Query: 50 KMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL-T 108 K L N LY +S +M+ L + + ++E SIDEAF D+ T Sbjct: 67 HSAMALSKAYKLCPDAT--FLPVNMPLYKHVSGEIMNILRKYADKMEQVSIDEAFLDVST 124 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 V + D + + I+ + LT +GIA KT+AK+A+ K + + Sbjct: 125 KVEDWNDAREHAKRIKKAIQVEEGLTCSIGIAPNKTIAKIASDFVKPDG------LTVV- 177 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 E + ++ L V ++ G+G + K L MGI + LA D++ + +R Sbjct: 178 -EEAKAFLAPLDVKNIPGVGPKTDKILRMMGIDQIGQLASGDVQKLVAAIGQSGKRLHLV 236 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G ++EE ++ + R+F D + + + + A + + + Sbjct: 237 ANGIDKSEVEE-KWVRKSLSRERTFVNDTRDASVLTKCVDALAEEVYNAMTDAGFVFKTV 295 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAGVML 347 S +K F + + + L T D + A + + + + GV + Sbjct: 296 SIKVKFEDFTIA------TRAKTLKTYHCDLSTLKRTANELMTELNNAKSKKKRLIGVRI 349 Query: 348 GDF 350 + Sbjct: 350 SNL 352 >UniRef50_D2R9L6 ImpB/MucB/SamB family protein n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2R9L6_GARVA Length = 409 Score = 255 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 79/423 (18%), Positives = 153/423 (36%), Gaps = 52/423 (12%) Query: 7 VNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCG 66 ++AFYAS E P+L GKP+++ + N V A + EA+A GV P K ++L + Sbjct: 1 MDAFYASLEVARHPELKGKPLIIGTGNRAVVSAASYEARAYGVNSAMPVVKARNLCPQG- 59 Query: 67 VVCFSSNYELYADMSNRVMST-LEELSPRVEIYSIDEAFCDL-TGVRNCRDLTDFGREIR 124 + + Y+ +S + ++ +VE S+DE + ++ + + + + G +R Sbjct: 60 -IFLPVDIPYYSSVSKSIFENIFLHITNQVEKVSVDECYMNVKSALLQWKSPVNIGTWVR 118 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 V ++ H+T VGIA K +AK+A+ AK L + +S +P+ + Sbjct: 119 KEVFEKYHITCSVGIASNKLIAKMASTNAKPNGM------LLIPQKCNEDFVSIMPLRAI 172 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV--LERTVRELRGEPCLQLEEFAP 242 GIG + KL+ G+ TV L + D + + + +RG + Sbjct: 173 PGIGSSLIHKLEDWGLSTVASLKNVDEATLTRITGSQILARMIYQSVRGIDERTV-TAHA 231 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 ++ I R+ T+ +++Q + + ++LR+ R I+ ++ Sbjct: 232 PEKSIGTERTLDTDTTNENAVKQLLQQCCSEVTQQLRNRKLMARTITLKLRFGD------ 285 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-------------RYQKAGVMLGD 349 + + S L T + + L H + AGV + Sbjct: 286 LHYVTRSSTLQNATDSTHEFYEHVVVLLSRANPTVHNYILGGNNTKLLSPVRLAGVTANN 345 Query: 350 FFSQGVA--------------------QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 N+ +D + K G Sbjct: 346 LVPANKVSLQPSLNDILEENTRESKNPTQNIMSTMNKNTRLRHAEHALDAVRKKYGNNAA 405 Query: 390 YFA 392 + Sbjct: 406 HIG 408 >UniRef50_C5CJ42 DNA-directed DNA polymerase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CJ42_KOSOT Length = 424 Score = 255 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 86/397 (21%), Positives = 151/397 (38%), Gaps = 22/397 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 A D++AF+AS E P L GKP++V V++ + EAK GVK G P FK Sbjct: 42 IAHVDMDAFFASVEQASNPYLKGKPIIVTGKDTRHSVVVSASYEAKKYGVKAGMPAFKAL 101 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 ++ + V + Y +S +M LE +SPR + SIDEAF DL+ + D + Sbjct: 102 EICPKALFV--PVDSGKYTYVSEEIMKRLEFISPRYSVASIDEAFIDLSVYHSLSDSINA 159 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + R ++ + ++ +G+A +AK+A+ K + ++ + + Sbjct: 160 LKLFRTSIEKTFGISFSIGVAVNPLIAKIASDFNKPRG------FVVVKEGSEKAFLQNV 213 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR-GEPCLQLE 238 + V GIG KL+ G K +L + D F+ +F V+ L +L Sbjct: 214 DISQVPGIGPHTLMKLENFGFKKASELLEADEFFLYHNFGNSFLGLVKSLTVKNYPKELF 273 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + S + + + + A+A ++R R S F+K S F+ Sbjct: 274 FKKEPPKSVGHSMTLNHDVNSIELIERVASFLGAKAVYRMRKYGYQARGTSLFLKYSDFS 333 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + + L + N + IW G + GV L Sbjct: 334 VARI------TRSLSFYISRPEHLNNVLYWLIREIWN-GEAVRAVGVSLYKLKPVNKNVY 386 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 + + V+ L G +++ A Sbjct: 387 Q----ENLFKKEKDTVEVVLNLQNHFGEYSIFPASIL 419 >UniRef50_C3PHE2 DNA polymerase IV n=10 Tax=Corynebacterineae RepID=C3PHE2_CORA7 Length = 492 Score = 255 bits (650), Expect = 3e-66, Method: Composition-based stats. Identities = 83/375 (22%), Positives = 148/375 (39%), Gaps = 21/375 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + RP L G+PV+V + G V + EA+A G P F+ + Sbjct: 16 VLHIDMDAFFASVEQLTRPTLRGRPVLVGGTSGRGVVAGASYEARAYGAHSAMPMFRAQQ 75 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 L VV +Y+ S RV + + + +E SIDEAF + + ++ + Sbjct: 76 LVGYRAVVVQPRR-AVYSAASRRVFGIIAQHAGVIEQLSIDEAFMEPAALLGATPAEVRE 134 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + +R + T L +G K AK+A+ AK + ER ++L+ Sbjct: 135 WSENLRRVIRTETGLPSSIGAGAGKQSAKIASGEAKPDGTF------VVPQERFKELIHP 188 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI-RKHFNVVLERTVRELRGEPCLQL 237 LPV +WG G +KL A+G++T+ LA + + VV + +G + Sbjct: 189 LPVGKLWGAGPVTQQKLAAIGVETIGQLAAMSRKEVEISLGGVVGVQLWELAQGIDERPV 248 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++I ++ + + A+ A A +L + + R ++ ++ + F Sbjct: 249 AP-RAIAKQISTEFTYPTDLRTAAEVDAALIRAAHGAHSRLLKDGRGARTVTVKLRMADF 307 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S S L T D + + A + G + GV Q Sbjct: 308 HIE------SRSATLSYATDDLKVLEAKALSLARYPEELG-PIRLVGVSYSGLEEA--RQ 358 Query: 358 LNLFDDNAPRPGSEQ 372 LF + + Sbjct: 359 DVLFPELDREIVRQA 373 >UniRef50_B1VHB3 DNA polymerase IV n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VHB3_CORU7 Length = 477 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 99/421 (23%), Positives = 165/421 (39%), Gaps = 30/421 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D++AFYAS E + RP L +PV+V + G V + EA+A G + P + Sbjct: 4 VAHIDMDAFYASVEQLTRPTLRDRPVLVGGMSGRGVVAGASYEARAYGARSAMPMHQAIR 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L R +V LY +S R+ + E + VE S+DE F + G+ + + Sbjct: 64 LCRNRAIVIQP-RSVLYKMISRRIFQVIAEHAGVVEQLSVDEGFAEPQGLVDAAAARRWA 122 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +++ V + T L +G+A TK AK+A+ AK E + P Sbjct: 123 EDLQRAVEEATELPCSIGMASTKLDAKMASDLAKPHGIFVV--------EDRMATFGPRP 174 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V D+WGIGR KL +G+ T+ D D ++ V G+ + Sbjct: 175 VGDLWGIGRVAQAKLADIGVHTIQQFVDMDPTDVKSLLGKVGLEVQVMAGGDDPRPVAP- 233 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++I ++ Y + + A +A +LR + + R I+ I+TS FAL+ Sbjct: 234 RAEAKQISAEQTLPVDARTYRDVLNIMELSARQAYRRLRKDGRAARTITVKIRTSDFALH 293 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S L PT D ++ AA L +G + GV L Sbjct: 294 ------TRSTTLPAPTDDFEQLLRAARAVLPRPEDSGA-VRLVGVGFSGLSHDRQEM--L 344 Query: 361 FDDNAPRP-GSEQLMTVMDTLNAKE---------GRGTLYFAGQGIQQQWQMKRAMLSPR 410 F + + + + T+ + G A + + +WQ + + P Sbjct: 345 FPELSHPAVPHQSVTQSATTVAGRGEVPAGAEAAGESHPGGAAERKESRWQQTQDVWHPD 404 Query: 411 Y 411 Y Sbjct: 405 Y 405 >UniRef50_Q29DW0 GA11465 n=3 Tax=Drosophila RepID=Q29DW0_DROPS Length = 954 Score = 253 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 67/440 (15%), Positives = 136/440 (30%), Gaps = 71/440 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S P+ G P+ V + G Sbjct: 273 IMHIDMDCFFVSVGLRSHPEWRGLPIAVTHSKGGNAATDVPVHPQADRQAELKLFAERFE 332 Query: 37 ------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+A G++ G + L + Sbjct: 333 HQLHDNIRADKVRSGFDKKMSLSEIASCSYEARAKGIRNGMFVGQALKLCPELKTI--PY 390 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQR 130 ++E Y +++ + T+ + + +E S DE F DLT + D+ F +R V + Sbjct: 391 DFEGYKEVAFALYDTVAQYTLNIEAVSCDEMFVDLTDLVEDLQVDVMSFVAHLREEVRNK 450 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T G+ K LA++A AK + G M+ ++ + G+G Sbjct: 451 TGCPCSAGVGTNKLLARMATKRAKPDGQYLLGPGT-----DVLGYMAPTALETLPGVGSS 505 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIIC 249 + KL+ G++ D+ T ++ + RG L + ++ + Sbjct: 506 LRHKLEQAGLRNCADVQRTSLQTLESVVGKKLALTLYENCRGIDTRPLV-YEQKRKTVSA 564 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT---------SPFALN 300 ++G R T+ + +A +L + + I + S F + Sbjct: 565 EVNYGIRFTNTTECETFLRQLSAEVTTRLTDIKRKAKSIGLKVMVRAAEAPIEASKFMGH 624 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN- 359 + S L T D I + R + H + G+ L + + Sbjct: 625 GVCDTINKSFILTHATDDVNVITSHVLRLMKESGLPPHELRGIGIHLSKLSEATEVKKDN 684 Query: 360 -LFDDNAPRPGSEQLMTVMD 378 L + ++ Sbjct: 685 VLLQMFEKMSEKRKGEPTVE 704 >UniRef50_Q9UBZ9 DNA repair protein REV1 n=27 Tax=Tetrapoda RepID=REV1_HUMAN Length = 1251 Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 70/417 (16%), Positives = 134/417 (32%), Gaps = 75/417 (17%) Query: 2 FALCDVNAFYASCETVFRPDL------------------------------------WGK 25 D++ F+ S RPDL GK Sbjct: 419 IMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTGRAPLRPGANPQLEWQYYQNKILKGK 478 Query: 26 PVVVLSNN------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 + ++ + + + EA+ LG+K G + K L Sbjct: 479 AADIPDSSLWENPDSAQANGIDSVLSRAEIASCSYEARQLGIKNGMFFGHAKQLCPNLQA 538 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRA 125 V ++ Y +++ + TL + +E S DEA D+T + +F +R Sbjct: 539 V--PYDFHAYKEVAQTLYETLASYTHNIEAVSCDEALVDITEILAETKLTPDEFANAVRM 596 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + +T VGI LA++A AK + E + V ++ Sbjct: 597 EIKDQTKCAASVGIGSNILLARMATRKAKPDGQYH------LKPEEVDDFIRGQLVTNLP 650 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTK 244 G+G + KL ++GIKT DL + ++K F + R RG + + Sbjct: 651 GVGHSMESKLASLGIKTCGDLQYMTMAKLQKEFGPKTGQMLYRFCRGLDDRPVRTEK-ER 709 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TS 295 + + ++G R T + S + +L + + ++ I T+ Sbjct: 710 KSVSAEINYGIRFTQPKEAEAFLLSLSEEIQRRLEATGMKGKRLTLKIMVRKPGAPVETA 769 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 F + + +V L T +++ I A + + G+ + Sbjct: 770 KFGGHGICDNIARTVTLDQATDNAKIIGKAMLNMFHTMKLNISDMRGVGIHVNQLVP 826 >UniRef50_A6DIV6 DNA polymerase IV n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DIV6_9BACT Length = 354 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 78/369 (21%), Positives = 139/369 (37%), Gaps = 31/369 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+A+ E +P+L GK V V G + A N EA+ GV Sbjct: 8 IIHVDMDCFFAAVEVRDQPELKGKAVAVGGAAKRRGVIAAANYEARNFGVHSALSTAIAL 67 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTD 118 ++ N Y ++S V + + VE S+DEAF D++ + T Sbjct: 68 RRCPE--LIIVRPNMSKYKEVSTEVFKIFRKYTHLVEAISLDEAFLDVSECPLHHGSGTL 125 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+ + +T L GIA K LAK+A+ K T E K + Sbjct: 126 IAEAIKKDIYAKTGLRASAGIAPNKYLAKIASDWMKPDGIYT------IPPENIEKFVQQ 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 LPV +WG+G+ ++L G++T DL ++ + K E + +G ++ Sbjct: 180 LPVKKIWGVGKETLRELRKFGLETCADLQKISVKNLAKLIGTNRAEELLELAKGIDNREV 239 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE-----HQYCRFISTFI 292 + ++ R+F + + A+ +KL++ + + Sbjct: 240 K-ANRERKSYTRERTFDSDL-SHGECSDALKVIFDECKKKLKAYLEEKPQYKIKTSVLKV 297 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 K + F S +V+ + I + T++L+ R + G + F Sbjct: 298 KFADF--------TSTTVECGDLNFEWSVIESLLTKALERNQL---RVRLMGCGV-KFTK 345 Query: 353 QGVAQLNLF 361 AQ +LF Sbjct: 346 HDSAQPDLF 354 >UniRef50_C1I721 DNA-damage repair protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I721_9CLOT Length = 415 Score = 252 bits (644), Expect = 1e-65, Method: Composition-based stats. Identities = 93/409 (22%), Positives = 159/409 (38%), Gaps = 29/409 (7%) Query: 1 MFALCDVNAFYASCETVFRPDL-------WGKPVVVLSN---NDGCVIARNAEAKALGVK 50 + DVN+ Y S V L P +V N G V+A++ AK +K Sbjct: 5 VIFHIDVNSAYLSWTAVRMLQLGETTEDIREIPSIVGGNTDERHGIVLAKSILAKRYNIK 64 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + F NY L+ D SN + + L E SP+++ YS+DE F D++ Sbjct: 65 TGEPVVDALKKCP--NLKIFKPNYRLFMDCSNAMYNLLYEYSPKIQRYSVDEVFIDMSHF 122 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + + EI+ + V +GI+ K LAK+A+ K T E Sbjct: 123 KENY--MEKAIEIQNRIRSELGFNVNIGISTNKLLAKMASDLEPKNAIHT------LFKE 174 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 + M LPVD+++ +GR KLD + I T+ +LA+ DI + F + Sbjct: 175 EIQNKMWTLPVDNLFMVGRATKSKLDKLNINTIGELANFDIGILESIFKSHGKVIHNYAN 234 Query: 231 GEPCLQLEEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G + ++ + I S + +T + I S +LR+ + CR IS Sbjct: 235 GIEESSVRKYNYVNVKGIGNSTTIAWDVTSKDEALKIILSLTESVCIRLRNNNSLCRVIS 294 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 IK F L + +I ++ + W+ G ++ GV + + Sbjct: 295 ISIKGFNFE------RYIHQRTLSNYIDCTEEIYKEMVKAFNEAWR-GETIRQLGVRVSE 347 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + Q +LFD L +D++ + G ++ + Sbjct: 348 LCNNEFFQSSLFDS-KKLEKQRALDKTIDSIRERYGNYSVIRSTFLHSG 395 >UniRef50_D2P394 DNA polymerase V n=7 Tax=Listeria RepID=D2P394_LISMO Length = 426 Score = 252 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 98/416 (23%), Positives = 166/416 (39%), Gaps = 18/416 (4%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVV---LSNNDGCVIARNAEAKA-LGVKMGDPWF 56 DV +F+AS E V R D +VV G V+A + + K +K G F Sbjct: 15 ILCVDVKSFFASVECVKRGLDPLQAFLVVMSNADRAGGLVLAASPQMKKVFRIKTGSRKF 74 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCR 114 + + R +V +LY ++ + +YSIDEAF D+T + Sbjct: 75 EVPEDDPR--IVIAPPRMKLYLHVNELIQKIFLRYVSREDFHVYSIDEAFLDVTHSKKLF 132 Query: 115 D-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 ++I+A +L+ L V VGI LAKLA A K Q+ G+ + + Sbjct: 133 GSAEVIAKKIQADILKELRLYVTVGIGDNPLLAKLALDNAAKHQK--SGIAEWRYKDVPE 190 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + PV D WGIG+R + +L+ MGI ++ L+ +++K V+ E+ G Sbjct: 191 TVWKIRPVTDFWGIGKRTAFQLERMGIYSIYGLSQMPPSYLKKRLGVIGEQLYYHSHGID 250 Query: 234 CLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 +L E + P ++ S+ + D + I A +LR+ H I Sbjct: 251 YSRLSEKYKPIERSYGKSQILEKDYHDPNQIAIIIQEMVEEVAMRLRNHHVDTSVIHLSA 310 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 S ++ G S K++ T S++++ +Q + V Sbjct: 311 GYSRYSTR---NGFSHQKKIMA-TDSSKELVPYFLEMFWK-YQENDAVRSVAVSCAGIKR 365 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 + QL++F+D +QL +D + + G L A I +KR+ L Sbjct: 366 KTSMQLSVFEDYTKTLQQQQLERTIDKIRDRYGFNALMHANSLIDGATGLKRSALV 421 >UniRef50_A7HFE4 DNA-directed DNA polymerase n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HFE4_ANADF Length = 459 Score = 251 bits (642), Expect = 2e-65, Method: Composition-based stats. Identities = 89/431 (20%), Positives = 153/431 (35%), Gaps = 53/431 (12%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+ S E + P L GKPVVV + G V A + E + LGVK G F+ Sbjct: 18 ICCLDLDTFFVSVERLLDPTLEGKPVVVGGKPGSRGVVTAASYEVRRLGVKSGMSLFEAG 77 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 + + +++Y + RV +P V + SIDE + D +G Sbjct: 78 KRAP--NAIYLPTRHDVYGTYAERVREIARRFAPTVRVASIDEMYLDFSGCERLYRSAGA 135 Query: 120 GR------------------EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R ++ + L G+A +K +AK+A+ AK Sbjct: 136 ARENGAEDRAGDAIIEGAVLQLTTAIFDELGLPSSAGVATSKVVAKVASALAKPRG---- 191 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV 221 V L +R +++ LPV GIG KL A G +T+ +A+ + ++ F Sbjct: 192 --VMLVPAGVERAVLAPLPVRSFPGIGPVAEAKLHAAGYQTLGAVAEASLADLQTIFGAW 249 Query: 222 LERTVRELRGEPCLQLEEFAPTKQ----------EIICSRSFGERITDYPSMRQAICSYA 271 R ++G L P I R+F E +TD S+ +C Sbjct: 250 AASISRGVQGLGSGDLCRERPAFAEHDPEGETVGSISNERTFREDVTDPASIEAVLCGLC 309 Query: 272 ARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 R + R H R ++ ++ + F + + S T ++ Sbjct: 310 ERVCWRARRRHVKARTVTLKLRYADF------HTLTRSHT-TMATNSELELYPIVKEMFA 362 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 A + GV L + F+ +E++ V+D + A+ G + Sbjct: 363 AARTRSLPIRLLGVQLSSLGT--------FEQLPLFDRNERVGAVVDGIRARFGFAAVSL 414 Query: 392 AGQGIQQQWQM 402 A + Sbjct: 415 ATGRGRPDEAR 425 >UniRef50_B6Q7Y5 DNA-directed polymerase kappa, putative n=2 Tax=Leotiomyceta RepID=B6Q7Y5_PENMQ Length = 647 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 84/370 (22%), Positives = 143/370 (38%), Gaps = 21/370 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AF+A+ E + RP+L P+ V G + N A+ G + G F K Sbjct: 116 IVVHVDCDAFFAAVEELDRPELKHLPMAVG---KGVLTTCNYVARKFGCRSGMAGFVAKK 172 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 L ++C NYE Y + + + E P E SIDEA+ ++T N D + Sbjct: 173 LCPD--LICIPQNYEKYTAKAEEIRAIFVEYDPCFESASIDEAYLNITAYCDENDMDPQE 230 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +++R+ + T +TV GIA LAK+A++ K + E + Sbjct: 231 AVQQMRSRIADETKITVSAGIAANTKLAKIASNQNKPNGQFYIPS----EREAIMAFVKD 286 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV V GIGR ++L A+GI+T + R ++ G +++ Sbjct: 287 LPVRKVNGIGRVFERELRAIGIETCGQIYPHRASLKRLFGEKAFHFLMQCHLGLGRTKIQ 346 Query: 239 EFAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F E I+D ++R + A A L R + IK F Sbjct: 347 PAVDYERKSVGTESTFSE-ISDPDAIRAKLRWAADELARDLSRTQFKGRTLVLKIKLHTF 405 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGV 355 + + V + D+ + L + + R + G+ S Sbjct: 406 EV------YTRQVAPPKAVWLADDLYTYSLPILAKLQKEIPNMRLRLLGLRCTHLVSTKK 459 Query: 356 AQLNLFDDNA 365 A L+ F A Sbjct: 460 AGLDFFGFQA 469 >UniRef50_A9UNE7 GH11153p (Fragment) n=8 Tax=Drosophila RepID=A9UNE7_DROME Length = 1012 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 73/438 (16%), Positives = 144/438 (32%), Gaps = 74/438 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S RP+L G P+ V + G Sbjct: 292 VMHIDMDCFFVSVGLRTRPELRGLPIAVTHSKGGNAATDVPVHPQADRKAELELFAQRFE 351 Query: 37 ------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+ G++ G + L + Sbjct: 352 HHFHDGDKAEKVRSGFDKKMSLSEIASCSYEAREKGIRNGMFVGQALKLCPELKTI--PY 409 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQR 130 ++E Y +++ + T+ + + +E S DE F +LT + + D+ F +R V + Sbjct: 410 DFEGYKEVAFTLYDTVAQYTLNIEAVSCDEMFVELTDLAHELNVDVMAFVSHLRQEVYSK 469 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T G+A K LA++A AK + L + M+ + +D + G+G Sbjct: 470 TGCPCSAGVAGNKLLARMATKEAKPNGQFL-----LDSSNDILAYMAPMSLDLLPGVGSS 524 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIIC 249 IS KL G+ D+ +T + + K + + RG L + ++ + Sbjct: 525 ISHKLKQAGLNNCGDVQNTTLEKMEKVLGKKLGQNLFQNCRGIDDRPLA-YEQIRKTVSA 583 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALN 300 +FG R T+ Q +C + ++L + R I+ I TS + + Sbjct: 584 EMNFGIRFTNSVECEQFLCQLSEEVTKRLVEIRRKARSINLKIMVRAAEAPVETSKYMGH 643 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ--- 357 + S + T D I + + G+ L + Sbjct: 644 GVCDIINKSSLIKYATDDVNVITTVVLDLMKDADIPPDELRGLGIHLTRLEDANEVRKEN 703 Query: 358 --LNLFDDNAPRPGSEQL 373 +F + + + Sbjct: 704 NIKEMFGKMSEMRKDKPI 721 >UniRef50_Q7NAR2 UmuC/DinP-like n=1 Tax=Mycoplasma gallisepticum RepID=Q7NAR2_MYCGA Length = 405 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 77/400 (19%), Positives = 155/400 (38%), Gaps = 26/400 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D +AF+AS E F P+ KP+VV S +N V + N A+ GV+ P F+ K Sbjct: 13 IFHIDFDAFFASVEENFNPEYNNKPLVVGSKSNGSIVSSANYIARKFGVRSAMPIFQAKK 72 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-VEIYSIDEAFCDLTGVRN---CRDL 116 L ++ +Y Y +S V S L + +E+ SIDE + D+T + Sbjct: 73 LCPS--LIIAEVDYPKYERVSAYVFSYLRDFVSNKMEVASIDECYMDVTDILEKNSEISA 130 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +D ++I+ + + T LTV +GI+ LAK+A+ K + + + Sbjct: 131 SDLAKKIQKQIYELTQLTVSIGISSNLFLAKMASDQNKPNGVYE------IWPDEIEEKL 184 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADT-DIRFIRKHFNVVLERTVRELRGEPCL 235 L + ++ IG + L+ + IK + + A + + F + G+ Sbjct: 185 WPLEIKKMYLIGSKKIPLLNQLNIKNIGNFAQFENKELLIDIFKNMYWDHYNHAHGKGSD 244 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ +++ I S++ +++DY S+ + +L++ + + IS I+T Sbjct: 245 FVDYERNSRKSISVSKNIRHKVSDYESLLKLFNDLFDDVYSRLKNHNLLAKNISVSIRTE 304 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 S S + N A + + + G+ ++ Sbjct: 305 KVR--------SLSFSFKQYSDKKTLFYNKAIDLFERLHN-NQLVANISISFGNITNKYK 355 Query: 356 AQLNLFDDNAPRPGSEQLM---TVMDTLNAKEGRGTLYFA 392 N+ + M +++ +N + + + A Sbjct: 356 FMPNINIYEELSKEQKDTMLLKKIVNQINKEYNKELVNIA 395 >UniRef50_Q3II35 DNA polymerase IV n=3 Tax=Alteromonadales RepID=DPO4_PSEHT Length = 351 Score = 251 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 67/350 (19%), Positives = 135/350 (38%), Gaps = 23/350 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 F D++ FYA+ E P L P+ + N G + N A+ GV+ + K Sbjct: 4 FIHIDMDCFYAAVEMRDNPKLANVPLAIGGNSRRGVLSTANYIAREYGVRSAMSNYHAKQ 63 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L +V +Y D+S ++ + + +E S+DEA+ D+T C+ T Sbjct: 64 LCPD--LVIVPGRMAVYKDVSTQIRAVFSRYTDLIEPLSLDEAYLDVTHSEQCKGSATLI 121 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++IRA + T LT GIA K +AK+A+ K + + ++ ++ L Sbjct: 122 AQQIRADIYNATGLTASAGIAPIKFIAKIASDENKPNGQF------VVLPDQVDAFLAQL 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + G+G+ +KL+ G+ T D+ + ++++H ++ GE ++ Sbjct: 176 PLGKIPGVGKVTLEKLNLKGLYTGQDVRKKGVNWMQQHVGNFGVSLYQKCAGEHIGRVST 235 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + ++ + + S +L + + +K FA Sbjct: 236 E-RVRKSLSVEHTYEYNKNSLQECLEQLPSLLEELTTRLNKQQLQNQVNKLSVK-VKFAN 293 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG--HRYQKAGVML 347 + A +L + L +Q G + G+ + Sbjct: 294 FVVTSADQAHQQLNSDIFS---------ELLAKAYQRGLQQPVRLLGIGV 334 >UniRef50_A4VCZ3 DNA polymerase IV / kappa n=1 Tax=Tetrahymena thermophila SB210 RepID=A4VCZ3_TETTH Length = 950 Score = 251 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 79/366 (21%), Positives = 139/366 (37%), Gaps = 24/366 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++ FY +CE RP L PV V + N A+ GV+ P F K Sbjct: 105 IWVHFDMDMFYVACELKDRPQLKDLPVAVGGM--SMISTANYVARKFGVRSAMPGFIAKK 162 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD----- 115 L + ++ N+E Y S++ L + P +E +DEA D+T + Sbjct: 163 LCPQLILI--PCNFEKYRKASDQFKKVLYQYDPNLESMGLDEANLDITDYLQQNNINSDA 220 Query: 116 -LTDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + D IR V + T LT GI K LAK+ + K + +++ E+ + Sbjct: 221 QIYDLCHSIRNQVFESTGGLTCSCGIGPNKMLAKICSDMNKPNGQFQL----INDEEKIK 276 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 M LP+ + GIG + L +GI+ + + I ++ + V G Sbjct: 277 DFMKDLPIRKIPGIGNVTEQILKGIGIEKCSQILERVIDIKICFKDLSFDHLVSSALGIG 336 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 E K+ + SR+F + I+ + + I + AE ++E + + ++ K Sbjct: 337 -RSWHEEETEKKSLSVSRTF-QAISTIEEINEKIHQISQLLAEDAKAEQKIGKHLAVSFK 394 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 F S + L QDS I A + + + G+ L + Sbjct: 395 NVKFQ------MRSKNRMLDKYIQDSEQIEKVAKELVKEL-LPTEPLRLIGIRLSQLADE 447 Query: 354 GVAQLN 359 + Sbjct: 448 NELKNQ 453 >UniRef50_B6K5W3 DNA polymerase kappa n=2 Tax=cellular organisms RepID=B6K5W3_SCHJY Length = 532 Score = 251 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 72/380 (18%), Positives = 140/380 (36%), Gaps = 30/380 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AFYAS E + +P KP+ V G + N A+ GV+ P F + Sbjct: 116 IIVHVDCDAFYASVEELEKPAYKTKPMAVGQ---GVLCTANYCARKFGVRSAMPEFIARQ 172 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD----L 116 L ++ Y + S + L+E P + S+DEA+ DLT + + Sbjct: 173 LCP--NLIVLPLRMMKYQEKSAEIAKILQEYDPNMCKASVDEAYLDLTDYLTKHNEEETV 230 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +R TV ++T +TV GI LAK+A++ K + + G E + M Sbjct: 231 EAVVEHLRQTVAEKTGITVSCGIGANLMLAKIASNMRKPNDQFSIGR----TREAILEFM 286 Query: 177 SALPVDDVW--------GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 LP V+ GIGR + ++L ++ + D+ + + Sbjct: 287 DTLPCRKVYLELNHNVNGIGRVLEQELSSLNVHNCGDILRRKGYLYYVFQEKSFQNLLSY 346 Query: 229 LRGEPCLQLEEFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 G ++ + ++ I +F + ++ Q + +E ++ + Sbjct: 347 ALGISNNVVKPTDASNRKSIGNEMTFSIPMGSEKTISQKLKQLCFSVSETMKQRNLVGNS 406 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + +KT+ F + + L T T +S I + L ++ + + GV + Sbjct: 407 VVLKLKTTSFEVR------TRQTNLNTYTNESDIIYKYVLQLLS--YELPVQVRLLGVRM 458 Query: 348 GDFFSQGVAQLNLFDDNAPR 367 + + + Sbjct: 459 TKLQDASIYEESKLSFTKEN 478 >UniRef50_B7GNF3 Transcriptional regulator, Fis family n=9 Tax=Bifidobacteriaceae RepID=B7GNF3_BIFLI Length = 448 Score = 251 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 86/417 (20%), Positives = 151/417 (36%), Gaps = 40/417 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E P L GKPV++ + V A + EA+ G+ P + L Sbjct: 47 VLHIDMDAFYASLEVARNPGLKGKPVIIGTGPRAVVSAASYEARRYGINSAMPAARAHQL 106 Query: 62 FRRCGVVCFSSNYELYADMSNRVM-STLEELSPRVEIYSIDEAFCDL-TGVRNCRDLTDF 119 V + Y MS+R+M ++ R E S+DE + D+ T + + Sbjct: 107 CPNG--VFLPVDMAYYRMMSHRIMHEVFLTVTDRFEQVSVDEGYMDVSTALLEWGRPSAI 164 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G IRA V +R H+T VGIA K +AK+A+ AK L R + + + Sbjct: 165 GAWIRAQVAERFHVTCSVGIACNKLVAKMASTNAKPDGM------LLIPAARSAEFVQMM 218 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER--TVRELRGEPCLQL 237 P+ + GIG + K+L+A G+ +V +LA D + + G ++ Sbjct: 219 PLRGIPGIGPSLEKRLNAWGVHSVAELAQLDETALTRATGSPAAARGLWAASHGLDSRKI 278 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ I + E D + + S A LR + R ++ ++ + Sbjct: 279 TTV-REEKSIGSEETLAEDTRDMRVVCGLLRSACDEVASTLRRKGLVARTLTVKLRFADL 337 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW----------QAGHRYQKAGVML 347 + + S + PT + + R L + + AG+ Sbjct: 338 S------YQTRSFTMERPTDTAGVLYPECVRQLKVMLGLPASAESATPLPKTIRLAGMST 391 Query: 348 GDFFSQ-----GVAQLNLFDDNAPRP------GSEQLMTVMDTLNAKEGRGTLYFAG 393 + ++ ++ A +D + K G F Sbjct: 392 SSLSEAAATAVQPSLDDMLEEAANARGQTSQARLHDAEAALDAVRRKFGSKAAQFGA 448 >UniRef50_A1A051 DNA-damage-inducible protein P n=10 Tax=Bifidobacterium RepID=A1A051_BIFAA Length = 471 Score = 251 bits (640), Expect = 5e-65, Method: Composition-based stats. Identities = 83/431 (19%), Positives = 151/431 (35%), Gaps = 48/431 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E P+ KPV++ N V A N EA+ G+ + + L Sbjct: 51 VLHIDMDAFFASLEVARHPEYADKPVIIGIGNRSVVSAANYEARKYGINSAMASSRARKL 110 Query: 62 FRRCGVVCFSSNYELYADMSNRVM-STLEELSPRVEIYSIDEAFCDLTG-VRNCRDLTDF 119 V + Y +MS R+ ++ R+E S+DE + D++G + + Sbjct: 111 CP--NGVFLPVDIHYYREMSRRIFTEVFSRVTDRIEQVSVDECYMDVSGALLRWKSPRAI 168 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G IR V +R H+T VGIA K +AK+A+ AK + + R + + + Sbjct: 169 GAWIRDQVARRYHITCSVGIAANKLVAKMASTNAKPDGM------LMIPVARHAEFVQMM 222 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN--VVLERTVRELRGEPCLQL 237 P+ + GIG + K+L+A G+ +V DLA + + + + RG + Sbjct: 223 PLRGIPGIGPSLEKRLNAWGVDSVADLAKMSMESLEQATGSAISARGLYMAARGLDDRPV 282 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + R+F + D + + A LR R + ++ Sbjct: 283 AP-RAQGKSVGAERTFDKDTQDMRQVTSMLRWCCDDVAGTLRRRGLMARKVMVKLRFPDL 341 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG----------HRYQKAGVML 347 + + L PT + + L A+ + AG+ Sbjct: 342 S------YATKGHTLDCPTDAASMLYPQCVALLLAMMGMPESSIDAISLTRPVRLAGMSA 395 Query: 348 GDFFSQGVAQLNLF-------------------DDNAPRPGSEQLMTVMDTLNAKEGRGT 388 G A + L + + +D + K G+G+ Sbjct: 396 GGLVEAADAAVQLSLDDMLEEQNEAQRGRGTDTEPSTQSERLRGAEAALDAVRLKYGKGS 455 Query: 389 LYFAGQGIQQQ 399 + Sbjct: 456 VRLGIWRTGPS 466 >UniRef50_Q6F1D8 DNA polymerase IV (PolIV) n=1 Tax=Mesoplasma florum RepID=Q6F1D8_MESFL Length = 370 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 78/366 (21%), Positives = 158/366 (43%), Gaps = 15/366 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++AF+ASCE L KPVVV +N+ ++A + +A+ G+K G P F+ K Sbjct: 5 VILHLDMDAFFASCEQAHDKTLKNKPVVVARNNDRSIIVAASYDARKYGIKAGTPIFEAK 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGV-RNCRDLT 117 L ++ N +LY + S R+ + ++E + +VE+ IDE F D T + ++ Sbjct: 65 QLA-YGELIIKEGNRDLYEEYSERIFNLIKEQFTYKVEVLGIDECFIDATNIWEKYGNVQ 123 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + I+A V Q T LT +G + T+ +K+ + K + E + L+ Sbjct: 124 NLCLAIQAAVYQETGLTCSIGASFTRLFSKMGSDMKKPNGI------TIITKENFKTLIW 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 + DV G+G +K++ + +KTV D D + I F + ++ ++L G ++ Sbjct: 178 NKSIKDVIGVGSSSLEKMELLNVKTVNDFVKLDEKIIADSFGLSGQKMYQKLHGIKNDEI 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT--- 294 + + + I ++F ++ + + + + A + +++ + + ++ IK Sbjct: 238 AYWETSVKSISKEKTFDKKNMAIEDIEEILFNLAEKVVLRMQKNNILAKTVTLSIKFYNQ 297 Query: 295 -SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 F E + S T + + LD I+ G G+ + + + Sbjct: 298 EINFDKKEQKKRRTYSETFNEYTDSLEKLYSRVKVILDDIYD-GESISLIGIGVTNLIEK 356 Query: 354 GVAQLN 359 Sbjct: 357 DKLVKQ 362 >UniRef50_D1HMR5 Whole genome shotgun sequence of line PN40024, scaffold_91.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1HMR5_VITVI Length = 704 Score = 250 bits (637), Expect = 9e-65, Method: Composition-based stats. Identities = 79/362 (21%), Positives = 145/362 (40%), Gaps = 21/362 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++AFYA+ ET+ P L G+P+ V + N EA+ GV+ P F + Sbjct: 106 IWLHVDMDAFYAAVETLDNPSLRGRPMAVGGM--SMISTANYEARKFGVRAAMPGFIARK 163 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--D 118 L ++ ++++ Y S+ ++ P S+DEA+ D+T V N RDLT + Sbjct: 164 LCPE--LIFVPTDFKKYTYYSDLTRKVFQKYDPNFMAASLDEAYLDITEVCNERDLTSGE 221 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+R +V + T LT G+A + LAK+ + K + + +S+ Sbjct: 222 IAEELRTSVHEVTGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPSNRM----AVMTFISS 277 Query: 179 LPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LP+ + GIG+ L GI T ++ + + G Sbjct: 278 LPIRKIGGIGKVTEHILSGVFGINTCEEMLQKGGFLCALFSRSSADFFLSVGLGLGKTD- 336 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ I R+F D + Q + + + ++ E R ++ +KT+ F Sbjct: 337 TPQVRFRKSISNERTFS-ATDDTALLYQKLAELSEMLSIDMQKEGLSGRTLTLKLKTASF 395 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S +V + DI+N A + L+A + G+ + F Sbjct: 396 EVR------SRAVTMQKYICSREDILNHALKLLNAE--LPLSLRLIGLRISHFNEDKDGH 447 Query: 358 LN 359 L+ Sbjct: 448 LS 449 >UniRef50_Q2HFL9 Putative uncharacterized protein n=1 Tax=Chaetomium globosum RepID=Q2HFL9_CHAGB Length = 1141 Score = 250 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 78/416 (18%), Positives = 142/416 (34%), Gaps = 47/416 (11%) Query: 2 FALCDVNAFYASCETVFR-PDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 D ++F+ + PD KP VV + + + N A+ GVK G + Sbjct: 313 IMHVDFDSFFCAVSLNRHAPDHRDKPTVVAHSTGSGSEIASCNYPARKFGVKNGMWMKRA 372 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-------- 110 ++L+ VV ++ Y + S + ++ V+ SIDEA D+T + Sbjct: 373 QELYPDIKVV--PYDFPAYEEASKLFYDAILDVGGVVQSVSIDEALVDITDIILSAAGSS 430 Query: 111 ----------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 + + +RA + ++T V VGI LAK+A AK + Sbjct: 431 GVGISEGSIWQEQEKADEIATNLRAEIKRKTDCHVSVGIGGNILLAKVALRKAKPAGQYQ 490 Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN- 219 E +++ L V+D+ G+ I KL+ + +K V DL T + Sbjct: 491 ------VRPEEVLDILAPLKVEDLPGVAYSIGGKLEEIDVKFVSDLRQTSKERLVSILGP 544 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 E+ RG ++ E P ++ + ++G R + + + +L Sbjct: 545 KTGEKLWEYARGIDRAEVGEQ-PIRKSVSADVNWGIRFVSQAEAEEFVHNLCKELERRLL 603 Query: 280 SEHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 +E + ++ I + + + SV T DS I + L Sbjct: 604 NEGVKGKNLTMKIMRRALDTPLDPAKHLGHGKCDTFTKSVTFGVATNDSGVIAKESVAIL 663 Query: 331 DAIWQAGHRYQKAGVMLGDFFSQGV-------AQLNLFDDNAPRPGSEQLMTVMDT 379 + + + GV + + F AP Q V D Sbjct: 664 RSYKFSPGDLRGLGVQMTKLEPIKPSSVPEGSQKKLNFSAAAPPTKRPQTEPVHDE 719 >UniRef50_B6Q3Z2 DNA damage repair protein Mus42, putative n=5 Tax=Eurotiomycetidae RepID=B6Q3Z2_PENMQ Length = 1167 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 66/411 (16%), Positives = 132/411 (32%), Gaps = 40/411 (9%) Query: 2 FALCDVNAFYASCETVFR-PDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQ 58 D ++F+A+ P+L KPV + + + N A+A G+K G Sbjct: 368 ILHVDFDSFFAAVSINKHHPELVDKPVAIAHGTGSGSEIASCNYPARAFGLKNGMWMKGA 427 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT- 117 D V ++ Y + S + + + V+ SIDEA D+T + Sbjct: 428 LDRCPELKV--LPYDFPAYEEASRQFYDCILAVDGVVQSVSIDEALIDVTMQCLQAGGSD 485 Query: 118 -----------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 + +R + ++T + VG+ AK+A AK + Sbjct: 486 GRGISEGSIYREQAKADEIATSLRHAIKKKTGCAISVGVGGNILQAKVALRKAKPAGQYQ 545 Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN- 219 + + L V D+ G+ + KL+ +G+K V D+ D + H Sbjct: 546 ------LKPDEVLDFIGNLTVQDLPGVAYSLGGKLEEIGVKFVKDMRDLTRERLVSHLGP 599 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 + RG ++ ++ + ++G R T+ + + S + +L Sbjct: 600 KTGAKLYDYARGIDKAEVG-VQTMRKSVSAEINWGIRFTNQTQAEEFVQSLSEELHRRLV 658 Query: 280 SEHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 + ++ + + + SV L T S I A L Sbjct: 659 ENLVKGKQLTIRVMRRSADAPLEPVKHLGHGKCDIFNKSVLLGIATNASDIISKEAIAML 718 Query: 331 DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 + + GV + A + + + + ++N Sbjct: 719 RSFGFTPGDLRGLGVQMTKLEPVKSATGGRLESSQQQLNFKASPVAQRSIN 769 >UniRef50_Q03X78 Nucleotidyltransferase/DNA polymerase for DNA repair n=19 Tax=Lactobacillales RepID=Q03X78_LEUMM Length = 440 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 101/419 (24%), Positives = 160/419 (38%), Gaps = 17/419 (4%) Query: 1 MFALCDVNAFYASCETVFRPD--LWGKPVVV---LSNNDGCVIARNAEAKA-LGVKMGDP 54 +F L D +FYAS E V R L G VV+ + N G V+A + AK LG+ Sbjct: 18 VFFLIDSKSFYASVENVERGFNPLKGDLVVMSEQANTNGGLVLAASPTAKKDLGISNVMR 77 Query: 55 WFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE--IYSIDEAFCDLTGVRN 112 +DL G+ Y + ++ + + + + YSIDE+ D+T Sbjct: 78 Q---RDLPDVHGLFIAHPRMNNYIAENLKINNIYRQYTDDINLLPYSIDESILDVTHSWR 134 Query: 113 CRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + +I+ V T + + VGI T LAK+A K R GV + Sbjct: 135 LFGKTPEEVAFKIQKQVRAETGVYLTVGIGDTPVLAKIALDIEAKHTRNLMGV--WHYED 192 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 KL +DDVW IG R + KL+ MGI ++ DLA D R +V E+ Sbjct: 193 VPTKLWPITKLDDVWSIGSRTAHKLEVMGIHSMYDLAHQDPYQYRAKMGLVGEQLFALSW 252 Query: 231 GEPCLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 G + E P + S+ + + A + A ++RS + +S Sbjct: 253 GIDRTDMAEVVVPKSKSYSNSQVLPRDYKRKEEIEIVVREMADQVATRIRSHKKQTCLVS 312 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 FI S + + PT D+R ++ + W G + G+ G Sbjct: 313 LFIGYSFAESERQGSHGFRKQQRIDPTNDTRKLMAIMVALFERHWH-GEVIRNIGIDYGG 371 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 QL+LF+ ++ V+D + + G L A + + RA L Sbjct: 372 LIEDTGVQLDLFEQPEKSIKFNKIDQVVDEIRKRFGTTALMRAMSKEKGGTAINRASLV 430 >UniRef50_UPI0000D862D7 hypothetical protein CIMG_01093 n=1 Tax=Coccidioides immitis RS RepID=UPI0000D862D7 Length = 1021 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 61/352 (17%), Positives = 120/352 (34%), Gaps = 39/352 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+L KPV + + + N A+A G++ G Sbjct: 350 ILHVDFDSFFAAVSIRKNPELADKPVAIAHGTGAGSEIASCNYPARAFGIQNGMWMQGAL 409 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-- 117 + V ++ Y D S + + ++ V+ SIDEA D+T + + Sbjct: 410 QMCPDLKV--LPYDFAAYEDASRKFYEAILDIDGIVQSVSIDEALVDITKLCLEAGGSEG 467 Query: 118 ----------------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + + +R +V Q+T V VGI AKLA AK + Sbjct: 468 KGISEGSIWKEQAKADEIAQTLRDSVKQKTGCDVSVGIGGNILQAKLALRKAKPAGQFQ- 526 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 E + + L V + G+ + KL+ +G+K V D+ + + + Sbjct: 527 -----LKPEVVLEFIGELTVQQLPGVAYSLGAKLEELGVKFVKDIRELSRERLTSNLGPK 581 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG + + ++ + ++G R + + + S +L Sbjct: 582 TGAKLWDYARGIDNADVGDV-APRKSVSAEINWGIRFVTQAQVEEFVQSLCDELHRRLME 640 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDII 323 + ++ I + + SV L T S ++ Sbjct: 641 NGVKGKQLTMRIMRRALDAPLGPPKHLGHGKCDMFNKSVLLGVATNSSEVLV 692 >UniRef50_B7QCT1 Terminal deoxycytidyl transferase rev1, putative n=1 Tax=Ixodes scapularis RepID=B7QCT1_IXOSC Length = 904 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 79/400 (19%), Positives = 145/400 (36%), Gaps = 52/400 (13%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------ 36 + D++ F+ S RP L GKPV V +G Sbjct: 258 VLMHIDMDCFFVSVGLRSRPHLKGKPVAVCHGKNGGIQPSSSHSRASDVPGTSGSGADGK 317 Query: 37 -------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLE 89 V + + EA+ GV+ G + K L +V +E Y+++S + T+ Sbjct: 318 GLMSMSEVASCSYEARDAGVRSGMFLGRAKQLCP--NLVAIPYEFESYSEVSKILYDTVA 375 Query: 90 ELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + +E S DE + D+T V + DF +R + ++T T VG+ A+ Sbjct: 376 SYTLDIEAVSCDELYADVTKVLQEAECTPNDFASFLRKEIEEKTCCTASVGLGPNMLAAR 435 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 +AN +AK + + + A+ V + G+G R+ +L MGI+T L Sbjct: 436 VANRSAKPNGHRF------VSTSELLEFFKAVAVKHLPGVGYRLQSQLTDMGIETCEQLQ 489 Query: 208 DTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + ++ F + RG L+ F ++ + ++G R + M + Sbjct: 490 AVSMETLKSKFGVKTGTLLFQHARGSDDKVLQ-FNKVRKSVSAEVNYGIRFKEANDMNKF 548 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQ 317 I + ++LR R +S +K + F + + SV+LL T Sbjct: 549 IGQLSEEVEKRLREAGVQGRAVSLKLKVRQKDAPLNPTKFMGHGMCDNITKSVQLLAATS 608 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + I + + G+ +G + Q Sbjct: 609 SAAAISRECCNLAAQLHLVPSDIRGVGIQVGRLEPRPGVQ 648 >UniRef50_UPI000180C22E PREDICTED: similar to polymerase (DNA directed), kappa n=1 Tax=Ciona intestinalis RepID=UPI000180C22E Length = 706 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 79/418 (18%), Positives = 140/418 (33%), Gaps = 56/418 (13%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E RP+L KP+ V + + N A+ GV+ P F K L Sbjct: 108 IIHIDMDAFYAAVEERDRPELKQKPMAVGGMD--MLSTSNYVARKYGVRAAMPGFIAKKL 165 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-------- 113 ++ +N++ Y ++S E S+DEAF D+T Sbjct: 166 CP--NLIIVPTNFDKYREVSKETQEIFSEYDENFCGMSLDEAFLDITDHLQKRLIYDQEE 223 Query: 114 ----------------------------RDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + +EIR + Q+T LT GIA L Sbjct: 224 RTFHYHPTLAPTTTSEDTDDKKSSETFGFSAEEVAKEIRFRIQQKTLLTASAGIAPNTML 283 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD 205 AK+ + K + N + K + PV V GIG+ + L ++G++ D Sbjct: 284 AKIGSDLNKPNGQTFFAP----NRDEIMKFIKDFPVRKVNGIGKVTEQLLSSLGVQKCGD 339 Query: 206 LADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + + + R G LE ++ I R+F I++ + Sbjct: 340 IYEMRAELMLLFSATSCSFFFRMCLGCSSNILEP-DGERKSISTERTFST-ISNRDELFA 397 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 + A ++ ++ + ++ K F L+ + S + P + + I Sbjct: 398 KLDELCHSLAADMKKQNVQGKTLTLKTKNVDFQLH------TRSKTINVPMTNYQTIFPV 451 Query: 326 ATRSLDAI---WQAGHRYQKAGVMLGDFFSQGV-AQLNLFDDNAPRPGSEQLMTVMDT 379 A L + GV L + AQ ++ A + + Sbjct: 452 AQELLKQEILNANNKLSLRLMGVGLSKLETGTTSAQTSILKFFAGNTKPQSCDKTLSA 509 >UniRef50_A4QFK8 DNA polymerase IV n=28 Tax=Actinomycetales RepID=DPO4_CORGB Length = 467 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 86/370 (23%), Positives = 148/370 (40%), Gaps = 21/370 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKP-VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ASCE + RP L G+P +V + G V + EA+ G + P + K Sbjct: 5 VLHIDMDAFFASCEQLTRPTLRGRPVLVGGVSGRGVVAGASYEARKFGARSAMPMHQAKA 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV--RNCRDLTD 118 G V + + +Y+ S RV +E+ + VE SIDE F + + ++ Sbjct: 65 RV-GFGAVVVTPRHIVYSAASRRVFQIVEKRAGIVERLSIDEGFMEPEALVGATPEEVKQ 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + E+RA + + T L VG K +AK+ + AK + +++Q L+ Sbjct: 124 WAEELRAEIKEVTGLPSSVGAGSGKQIAKIGSGEAKPDGVF------VVPVDKQHDLLDP 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 LPV +WG+G KL +MG++T+ DLA + + RG + Sbjct: 178 LPVGALWGVGPVTGSKLASMGVETIGDLAALTQKEVEISLGATIGISLWNLARGIDDRPV 237 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 E ++I ++ + + + AI A A +L + + R +S ++ + F Sbjct: 238 EP-RAEAKQISQEHTYEKDLLTRQQVDAAIIRSAEGAHRRLLKDGRGARTVSVKLRMADF 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S S L T D + A R + GV Q Sbjct: 297 RIE------SRSYTLSYATDDYATLEATAFRL-ARYPGEVGPIRLVGVSFSGLEES--RQ 347 Query: 358 LNLFDDNAPR 367 LF + + Sbjct: 348 DILFPELDQQ 357 >UniRef50_Q5Q9H0 Polymerase kappa isoform 9 n=3 Tax=Murinae RepID=Q5Q9H0_MOUSE Length = 467 Score = 248 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 71/343 (20%), Positives = 126/343 (36%), Gaps = 21/343 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P+L KP+ V S + N A+ GV+ P F K L Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGSM--SMLATSNYHARRFGVRAAMPGFIAKRL 159 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 + ++ N++ Y +S V L E P S+DEA+ ++T ++ ++ D+ Sbjct: 160 CPQ--LIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNIT--QHLQERQDWPE 215 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 + + + + +GIA LAK+ + K + L + + LP+ Sbjct: 216 D-KRRYFIKMGNYLKIGIAPNTMLAKVCSDKNKPNGQYQ----ILPSRSAVMDFIKDLPI 270 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 V GIG+ K L A+GI T +L + G L Sbjct: 271 RKVSGIGKVTEKMLMALGIVTCTELYQQRALLSLLFSETSWHYFLHIALGLGSTDLA-RD 329 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 ++ + R+F E I+ A A L+ E R ++ +K F + Sbjct: 330 GERKSMSVERTFSE-ISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVNFEVK- 387 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQK 342 + + + + +I A L + H + Sbjct: 388 -----TRASTVPAAISTAEEIFAIAKELLRTEVNVGSPHPLRL 425 >UniRef50_Q8TIW3 DNA polymerase IV n=4 Tax=Methanosarcinaceae RepID=DPO4_METAC Length = 366 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 93/377 (24%), Positives = 150/377 (39%), Gaps = 31/377 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-----GCVIARNAEAKALGVKMGDPW 55 + D++ FYA+ E +P+L GK VVV + G V N A+ G++ G P Sbjct: 5 VIIHVDMDYFYAAIEEREKPELLGKAVVVCMLSGRSELSGSVSTCNYIAREFGIRSGMPC 64 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP------RVEIYSIDEAFCDLTG 109 + K L V E Y +S+R+M L + E S+DEAF ++T Sbjct: 65 SRAKKLNPE--AVFLPVRKEFYTSVSDRIMEILRSYADPGENGDSFEQISVDEAFLEITY 122 Query: 110 VR--NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + + G +I+ + ++ +LT +GI K +AK+A+ A K + Sbjct: 123 RAGGDFNLAFELGMQIKKEIKEKENLTCSIGIGPNKLIAKMASSAKKPDGI------TVV 176 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTV 226 + E Q + L V +WGIG +KKL M I TV DLA+ D+ + F Sbjct: 177 SPENQEAFLWPLKVSKLWGIGDVTAKKLQEMDIVTVKDLAEHDVIELISTFGKSRGTWLK 236 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 + G L+E ++I + E D + + A EKL S R Sbjct: 237 QAASGIDDSPLKE-REGSEQIGRIATLPEDTLDQELILSLLEKLAGDVIEKLDSRELSFR 295 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGV 345 ++ + S F + S L P ++ AA L +++ GV Sbjct: 296 VVTVTVINSNFR------TYTKSRTLNHPVSSKETLLEAAREILSEFLSESKTEFRRVGV 349 Query: 346 MLGDFFSQGVAQLNLFD 362 +G + +LFD Sbjct: 350 RVGGLQKKKGQ-TSLFD 365 >UniRef50_D2VFM3 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VFM3_NAEGR Length = 888 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 67/396 (16%), Positives = 144/396 (36%), Gaps = 23/396 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D++ F+AS P L KP+ V + DG + + N A+ GV+ G + + Sbjct: 271 VVHIDMDCFFASIAMRDNPSLKNKPIAVSYSTDGTGDISSANYCARDFGVRAGMWMKQAR 330 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC---RDL 116 +L ++ +E Y + ++++ L RV+I SIDEAF ++T +L Sbjct: 331 ELCPD--LIVVPYEFEKYNEAASKIDEILNSHCERVKIISIDEAFIEITNELKNNTVEEL 388 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + +IR + + T T G++ + LA++A AK + + + + Sbjct: 389 NELVSKIRNEIERETKCTASAGMSTNQLLARIATKKAKPNGQFY------LDAKEAVSFI 442 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCL 235 L ++++ +G + K + M I L +++ E LRG Sbjct: 443 ENLNIEEIPSVGWKTKKFFNQMSITKCSQLLSYSKTELKELVGEKKGETLYNFLRGIDKR 502 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + ++ + ++G R T + + I + +L++E+ + I +K Sbjct: 503 PFFD-DTGRKSVGVEVNYGIRFTKMAQVSEFIDKLSIEVTSRLKNENVKGKAIVLKVKKR 561 Query: 296 --------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + + S S + T DS I + + + + + Sbjct: 562 KDEAPEAKKYLGHGICDNFSKSCTVPYFTDDSDLISRKVKDLYNQLSIEAEDLRGIAIQI 621 Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 + + + ++ LN++ Sbjct: 622 QKLNVTRNNNNSSLTKYLKKDAQQLEEQQIEVLNSQ 657 >UniRef50_B2AY86 Predicted CDS Pa_1_10240 n=3 Tax=Sordariomycetes RepID=B2AY86_PODAN Length = 1122 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 74/384 (19%), Positives = 128/384 (33%), Gaps = 39/384 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+ KP VV + + + N A+ GVK G + Sbjct: 344 ILHVDFDSFFCAISLQKCPEYADKPTVVAHGSGTGSEIASCNYPARKFGVKNGMWMKRAL 403 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG---------- 109 +L G+ ++ Y S L + V+ SIDEA D+T Sbjct: 404 ELCP--GLKVLPYDFAGYEKASEVFYQVLLGVGGVVQSVSIDEALVDVTDVVLRGVGSTG 461 Query: 110 --------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 R + R +R V +RT V VGI LAK+A AK + Sbjct: 462 VGVGEGSVCREQEKAEEIARGLRGEVRRRTGCEVSVGIGGNVLLAKVALRRAKPAGQHQ- 520 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 E + L V+ + G+ I +L+ MGI+ V D+ T + Sbjct: 521 -----IRPEEVLDSIGELGVEGLPGVAGSIGGRLEEMGIRFVKDIRGTTRERLVSVLGPK 575 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 ER RG +L E P ++ + ++G R + + + ++L + Sbjct: 576 TGERLWDYARGVDRSELGEQ-PVRKSVSADVNWGIRFVSQEEAEEFVRNLCGELEKRLLA 634 Query: 281 EHQYCRFISTFIKT---------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 E + ++ I + + + S T D+ I A L Sbjct: 635 EGVKGKLLTVKIMRRSLDAPLDPAKHLGHGKCDTFNKSASFGVATCDAEVIGKEAVGILR 694 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGV 355 + + + GV + Sbjct: 695 SYKFSPGDLRGIGVQMTKLDHIKP 718 >UniRef50_B7CAT7 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B7CAT7_9FIRM Length = 419 Score = 247 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 83/418 (19%), Positives = 149/418 (35%), Gaps = 22/418 (5%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E V + D + +VV G +A K LGV F+ Sbjct: 5 YLCIDLKSFYASVECVEQGLDPFEVNLVVADPTRGGGAITLAATPAIKKLGVSSRGRIFE 64 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR- 114 + + LY + S RV E + +YSIDE+F D+T Sbjct: 65 ID---PKIEYMITPPRMHLYMEYSCRVYKIFLEFIAKEDIHVYSIDESFLDITNYLKLYQ 121 Query: 115 -DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + + ++I + ++T L VGI LAK+A + K + L+ ++ Sbjct: 122 VNAKELAKKILDRIYEKTGLIATVGIGTNLYLAKIAMDISAKH--NADRIACLNEDLYRQ 179 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 L P+ D W +G ++L +GI + DL I + K F V E + G+ Sbjct: 180 TLWHHTPMTDFWMLGNGTERRLHKLGIYDMYDLCQFPIEILYKEFGVNAEYIIDHAWGKE 239 Query: 234 CLQLEE---FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 +++ + + I S+ E Y + + + L +H + IS Sbjct: 240 PTTIQDIKNYKSKQHSISNSQILFED-YSYKNAFVVMKEMVDQNVLTLTEKHLVTKQISL 298 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 I S + S K+ T ++ R I + ++ + D Sbjct: 299 MIGYSKDCIKPSCG----SCKITNCTNSYSILLEEFKRLYIRIVNPNYPIRQIAISFQDV 354 Query: 351 FSQ-GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + +LF D ++L + + + G+ + + KR L Sbjct: 355 KDEYYYENYDLFTDVEKVEREKKLQETLVQIKHRYGKNAILKGMNALDFATAKKRNTL 412 >UniRef50_A0QHM7 DNA polymerase IV 1 n=8 Tax=Corynebacterineae RepID=A0QHM7_MYCA1 Length = 458 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 98/389 (25%), Positives = 154/389 (39%), Gaps = 21/389 (5%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQKDL 61 D++AF+AS E + RP L G+PV+V V+A + EA+ G + P + K L Sbjct: 2 LHLDMDAFFASVEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQAKRL 61 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTDF 119 V +Y S RV T+ + P VE S DE F + + D+ F Sbjct: 62 V-GVSAVVLPPRGVVYGVASRRVFDTIRAVVPVVEQLSFDEGFGEPAQLAGAPAEDVEAF 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++R V ++T L VG K +AK+A+ AK V + +R+L+ L Sbjct: 121 CEQLRRRVREQTGLIASVGAGSGKQIAKIASGLAKPDG------VRVVRRAEERELLGGL 174 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLE 238 PV +WGIG +KL +GI+T+ +LA R RG + Sbjct: 175 PVRRLWGIGPVAEEKLHRLGIETIGELAALTDAEAANILGATIGPALHRLARGIDDRPVA 234 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E ++I +F +T +R+AI A A +L + + R ++ +K S Sbjct: 235 E-RAEAKQISSESTFAADLTTLEQLREAIEPIAEHAHHRLLRDGRGARTVTVKLKKSD-- 291 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S L T ++ ++ A R L + G + GV Q Sbjct: 292 ----MSTLTRSATLPYATTEAAALVGVARRLLLDPREIG-PIRLLGVGFSGLSEV--RQE 344 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRG 387 +LF D +V A G G Sbjct: 345 SLFPDLEMPAPQSDSQSVETAAEAMFGPG 373 >UniRef50_C4G2M8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2M8_ABIDE Length = 414 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 86/428 (20%), Positives = 164/428 (38%), Gaps = 52/428 (12%) Query: 1 MFALCDVNAFYASCETVFR----PD---LWGKPVVVLS---NNDGCVIARNAEAKALGVK 50 + DVN+ + S V + P+ L P + G + A + AK GV+ Sbjct: 4 LIFHVDVNSAFLSWTAVKKLKEEPESVDLRTIPSAIGGDVSKRHGVITACSIPAKKQGVR 63 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G+P + + + F S+++ Y + S + + L++ + VE SIDEA+ D+TG Sbjct: 64 TGEPVMRALEKCPELQL--FPSDFKTYREYSAKFIEILKKYALVVEQVSIDEAYLDMTGT 121 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 +I+A + + TV +GI+ K LAK+A+ K ++ T + Sbjct: 122 DE---PVSMAEKIKAEIYESLGFTVNIGISTVKLLAKMASDFEKPYKVHT------LFPK 172 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVREL 229 ++ M LP++ + G G R S+KL +G+KT+ D A D + + E Sbjct: 173 EIKEKMWKLPIEKLHGCGYRTSEKLRNIGVKTIGDAAALDKKLLCSLLGEKSGEYIHESS 232 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERI---TDYPSMRQAICSYAARAAEKLRSEHQYCR 286 G + + + I T M + I + +++L+ + Sbjct: 233 NGRGSDIVSGEREAAKSYSNETTLPYDIRVSTYDKEMPEVIKWLSESVSKRLKKDGAEGY 292 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA-------IWQAGHR 339 IS KTS F S L+ ++++I + + +++ Sbjct: 293 TISVSAKTSSFK------RRSKQTTLVESINNAKEIEKVSISLMKELCFGEKGLFEGDEG 346 Query: 340 YQKAGVMLGDFFSQGVAQLNLFDDNAP--------------RPGSEQLMTVMDTLNAKEG 385 + GV + Q+++F + ++L T++ +N K G Sbjct: 347 IRLVGVGVSHLAEHECKQMDIFSYMKEKSVQDEIKLKETKIKEKEDKLSTMLKKINEKFG 406 Query: 386 RGTLYFAG 393 G + G Sbjct: 407 EGKIKKGG 414 >UniRef50_B0D2Y9 Predicted protein n=3 Tax=Agaricales RepID=B0D2Y9_LACBS Length = 1152 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 78/406 (19%), Positives = 137/406 (33%), Gaps = 44/406 (10%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARN--------AEAKALGVKMG 52 + CD + F+ S V RP+ GKPVVV + A + EA+ G+K G Sbjct: 382 VIMHCDFDCFFVSAGLVSRPEHKGKPVVVCHSQGTQGGASSTSEIASSSYEARKFGIKNG 441 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + + L G++ +E Y S + L + ++ S+DEA D+T Sbjct: 442 MSLQQARKLCP--GIITIPYEFERYKQFSLLFYTVLMSHADDLQAVSVDEALIDVTSTVT 499 Query: 113 CRD------------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 DF IRA + + T + +GI+ LA+LA AK Sbjct: 500 QLRSHVGLEGSPHDPAKDFAETIRAQIRKATSCEISIGISHNILLARLATRRAKPGGSFH 559 Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFN 219 ++ L + D+ G GR +K + +G+ T+ +LA + Sbjct: 560 LV------PLDVPDFLAPLDIADLHGFGRSTKQKAQEKLGVTTLGELAKKSKGVLIDALG 613 Query: 220 V-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 E +RG +L E ++ + C ++G R + + AA ++L Sbjct: 614 KATGETLYDAVRGIDDKKL-ESDKPRKSVSCEINYGIRFENNEQAEAFVHQMAAEVKKRL 672 Query: 279 RSEHQYCRFISTFIKTSP---------FALNEPYYGNSASVKL----LTPTQDSRDIINA 325 + R I+ + F + + + L T D + I Sbjct: 673 DAIDMVGRSITMKVMKRDPTAPVEPPKFLGHGSCDLFNKQIPLIGPGGRATSDEQIIGEH 732 Query: 326 ATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 A R L + + G+ + S + Sbjct: 733 AWRLLKSFNFDPKELRGLGIQVQKLESASSTAHAPPGQAMLPFKRK 778 >UniRef50_O94623 DNA repair protein rev1 n=1 Tax=Schizosaccharomyces pombe RepID=REV1_SCHPO Length = 935 Score = 246 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 74/366 (20%), Positives = 126/366 (34%), Gaps = 23/366 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQKDL 61 D + F+AS T F +L KPV V + + N EA+ G+K G K+L Sbjct: 280 LHVDFDCFFASVSTRFSHELRLKPVAVAHGIKNSEIASCNYEARKFGIKNGMYVGTAKNL 339 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTL-EELSPRVEIYSIDEAFCDLTGVRNCR-DLTDF 119 VV ++ Y +S + L L +++ SIDEA D+T + D + Sbjct: 340 CPSLRVV--DYDFGAYESVSREFYTILVNTLHDYIKVISIDEALLDITSSVSSFQDCFEI 397 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IR+ V ++T+ V VGI LA+LA AK + + E ++S L Sbjct: 398 AESIRSQVREKTNCEVSVGIGPNVLLARLALRKAKPHNVYSLSI------ENVFDVLSPL 451 Query: 180 PVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 V D+ G+G ++KL + G++T+ L + +++ F V RG + Sbjct: 452 SVQDLPGVGSSQAQKLFNLYGVRTIGQLQRIEKFNLQETFGVNYGLHLYNISRGID-TDI 510 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI----- 292 ++ I ++G R + ++ I I Sbjct: 511 INNETPRRSISVDVNWGVRFVFQEDGIDFLKRLLHELLSRMGKCQVLLHQIQLRILKRAD 570 Query: 293 ----KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + + S + T I T I + G+ Sbjct: 571 GAPFSPPKYLGAGEVTSFTKSSTFTSATNSFDLIWKKVTSMYKTINVDPGDVRGIGLQAL 630 Query: 349 DFFSQG 354 Sbjct: 631 KIIKDN 636 >UniRef50_Q7Q6B2 AGAP005939-PA n=2 Tax=Culicidae RepID=Q7Q6B2_ANOGA Length = 1055 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 67/436 (15%), Positives = 133/436 (30%), Gaps = 77/436 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S P L G PV V + Sbjct: 290 IMHIDMDCFFVSVGLRKYPHLRGLPVAVTHSRGSEARVPSHPGQNRALEIELYHKRLEER 349 Query: 37 -----------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 + + + EA+ GVK G L + + Sbjct: 350 YKAPDIPIESRLAAIDEHNSLSEIASCSYEARQCGVKNGMFVGAALKLCPELKTI--PYD 407 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL--TDFGREIRATVLQRT 131 ++ Y ++++++ T+ + +E S DE F DLT + + +F +R + T Sbjct: 408 FDGYREVAHQLYDTIARYTLDIEAVSCDEMFVDLTELLQSTGVGVMEFVTYVRNEISTAT 467 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 GI + A++A AK + + M +P+ ++ G+G Sbjct: 468 GCDCSAGIGANRLQARMATKRAKPNGQYHLV------PGAVEEYMKVIPIAELPGVGPST 521 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICS 250 S +L M T DL ++ F E RG L + ++ + Sbjct: 522 SHRLRKMTYVTCADLQTIPKNVLQTEFGKKFGETLYNACRGIDERPLV-YDRGRKSVSVD 580 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI---------KTSPFALNE 301 ++G R + + + + +L Q + ++ + +T+ F + Sbjct: 581 VNYGIRFSTEQEVERFMRQLTQEIHRRLVELRQRGKLVTVKLLVRSPEAPVETAKFMGHG 640 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF--------SQ 353 + S L T D I A + + A + G+ + F Sbjct: 641 LCDVVTKSQPLRQHTDDRGMIEGAVLGLMRMLAIAPSELRGIGIQISKFEGTKHAANSEA 700 Query: 354 GVAQLNLFDDNAPRPG 369 G ++F + Sbjct: 701 GNRLKSMFQKVEDKRK 716 >UniRef50_A0D236 Chromosome undetermined scaffold_35, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0D236_PARTE Length = 591 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 86/361 (23%), Positives = 139/361 (38%), Gaps = 20/361 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++A D++ FY +CE + +P+L KPV V V N A+ GV+ P F K Sbjct: 87 IWAHFDMDMFYVACELLDKPELKDKPVAVGQ---TIVSTANYVARKFGVRSAMPGFVAKK 143 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLTD 118 L ++ ++E Y +SN M+ L++ +E +DEA DLT N D Sbjct: 144 LCPE--IIFIPCHFEKYKSVSNIFMTILKKYDDNLESMGLDEANLDLTEYINNSQEDPAI 201 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 IR +L T LT G+ K +AKLA+ K V + + Sbjct: 202 LCENIRKDILLATQLTASCGVGPNKMIAKLASEINKPNGLH----VVEQSATAVLNFLEK 257 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + GIG + L + T D+ D E G Sbjct: 258 LPIRKIPGIGNITEQILSGLNFNTCKDVRDRADELYVIFTPKTFEYIFYSCWGVARNYHV 317 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 EF I C R+F I+ + A + AE+++SE + ++ IKTS F Sbjct: 318 EFEDQ-HSISCQRTFSS-ISTQREFEDKVDYIAEKLAEEMQSEEKVGNHLTLIIKTSKFE 375 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + S S++L T ++ I + L + + G+ + ++ Q Sbjct: 376 IR------SKSLQLNQYTNQAKQIAIYGKQLLKIMQLD-EPIRLLGLKMSSLANEKQIQK 428 Query: 359 N 359 Sbjct: 429 Q 429 >UniRef50_A9V4K7 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9V4K7_MONBE Length = 1412 Score = 245 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 63/388 (16%), Positives = 124/388 (31%), Gaps = 56/388 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + D++AF+ S R +L +PV + + + + N A+ G++ G + Sbjct: 322 VIVHIDLDAFFVSIALRERQELQDQPVAIAHSGREGSSEISSCNYPARQFGIRNGMSMRR 381 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC---- 113 + ++ Y S L + R++ S+DEA+ DLTG+ Sbjct: 382 ALAACPH--LQTLPYEFDKYKLASQAFYRLLTARTLRIQAVSMDEAYLDLTGLVRPDYSP 439 Query: 114 -------------------------------RDLTDFGREIRATVLQRTHLTVGVGIAQT 142 + T+F E+R + + + GI Sbjct: 440 HLWQAVQQRQHEGHPPLSPAPLQEASLPVPTQSATEFVAELRTAIAEELGIAASAGIGPN 499 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 LA+L AK + + + + D+ G+G + +L MGI + Sbjct: 500 VLLARLCTRLAKPNGLYSYA------EANVERFIDQTALKDLPGVGWCTAGRLTTMGIAS 553 Query: 203 VLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 DL + ++ F + RG L++ AP + + ++G R Sbjct: 554 CADLRALPLDRLQADFGHKNGQALYNACRGIDPSPLKDNAPP-KSVSVEITWGVRFDKDA 612 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIK--------TSPFALNEPYYGNSASVKLL 313 + + + +L + Q ++ IK + P + S L Sbjct: 613 QVDTFVSNLCREVCSRLEAVGQLATRVTLKIKQRKPDAGDPHKRLGHGPCDDRNRSTALP 672 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQ 341 +PT D I + + Sbjct: 673 SPTDDLATITATCLELTHLLAVPVLDVR 700 >UniRef50_C2HDM1 Possible DNA-directed DNA polymerase n=83 Tax=Firmicutes RepID=C2HDM1_ENTFC Length = 471 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 91/425 (21%), Positives = 166/425 (39%), Gaps = 24/425 (5%) Query: 2 FALCDVNAFYASCETVF-RPDLWGKPVVVLSNND--------GCVIARNAEAKA-LGVKM 51 D +FYAS E V D +VV+S G ++A + AK G+ Sbjct: 30 ILCIDCKSFYASVECVEKDLDPLTTKLVVMSYPSDSTETRGSGLILASSPAAKKAYGI-- 87 Query: 52 GDPWFKQKDLF-RR-CGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDL 107 + +DL + + Y + + + + ++ + +YS+DE+F D+ Sbjct: 88 -TNISRARDLPFPYPSDLYIVAPRMAYYMEKNREINTIYKKYADEANHHVYSVDESFLDV 146 Query: 108 TGVRNCRD---LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV 164 T D + I V ++T + +GI LAKLA K +Q + Sbjct: 147 TNSMALFGKTNAYDMAKLIHKDVFEQTGIYTTIGIGDNPLLAKLALDNGSKDGKQM--IA 204 Query: 165 DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER 224 + + KL + + D WGIG+R +K+L MGI +V DLA D ++ ++ + Sbjct: 205 EWRYEDVPEKLWTISDITDFWGIGKRTAKRLKQMGIHSVYDLAHADYYHLKSTLGIIGTQ 264 Query: 225 TVRELRGEPCLQL-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 G L +E+ P + I S+ T + I A + +LR Sbjct: 265 LYAHAWGIDRSFLGQEYIPKSRSIGNSQILDRDYTRQEEIEIVIKEMADQVGTRLRRSAA 324 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 + +S ++ S L+ + T SR++ +A ++ ++ Sbjct: 325 KAQVVSLWVGYSLGYLDPNGKTGFHQQTKIEATNASRNLADALLTIFHQHYR-CQDIRRI 383 Query: 344 GVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 GV + QLNLF++ + ++ V+DT+ K G ++ A +Q + Sbjct: 384 GVNCSNLVYATGLQLNLFENPEKQINEAKVDFVVDTIRKKYGFKSIIHAHSLLQGGRAIA 443 Query: 404 RAMLS 408 R+ L Sbjct: 444 RSSLV 448 >UniRef50_UPI0001C32444 DNA-directed DNA polymerase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32444 Length = 370 Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats. Identities = 79/358 (22%), Positives = 138/358 (38%), Gaps = 21/358 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + A D +AFYAS E + RPDL K V+V V + A+ GV P + K Sbjct: 14 VIAHLDCDAFYASVELLRRPDLRDKAVIVAHDGPRSVVTTASYAARRYGVGSAMPLSRAK 73 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L + ++E Y +S + + R++ +DEA+ DLTGV Sbjct: 74 RLCPH--AILLPPDFESYRRVSRALWEIVGGRLGRLQHLGLDEAYADLTGVEK---PVRV 128 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 RE+ V T +TV VG+ ++ +AK+ + K G E + + Sbjct: 129 LRELVEQVRAETGITVSVGLGPSRLIAKICSDLGKPAGFVAMG------REEAAQRFAGH 182 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLE 238 + GIG + ++L MGI+T+ L T + + F +R ++E Sbjct: 183 SPKLLPGIGPKSVERLREMGIETIGQLQATPEERLTERFGARHGRDLLRRAHFHDSSEVE 242 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + R+F E +T + + + A E L+ + R I+ ++ Sbjct: 243 TS-RVLKSRSNERTFDEDVTSLTQLEEILRRLAQGLCEGLQRREKRGRTIAIKVRLDD-- 299 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + + + + T D+ + + A L A + + GV L F + A Sbjct: 300 ----WTTVTRARTVDAHTNDTALVTDVALELLRA-YAPPRPVRLLGVRLASFEDEEGA 352 >UniRef50_C4LI62 DNA polymerase IV n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LI62_CORK4 Length = 512 Score = 243 bits (621), Expect = 8e-63, Method: Composition-based stats. Identities = 81/379 (21%), Positives = 145/379 (38%), Gaps = 19/379 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKP-VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ASCE + RP L G+P +V + G V + EA+ GV P + + Sbjct: 27 VLHIDMDAFFASCEQLTRPTLRGRPVLVGGVSGRGVVAGASYEARVFGVHSAMPMMRARR 86 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV--RNCRDLTD 118 L G+ +++Y S RVM L E + +E S+DEAF + + + Sbjct: 87 LVGYAGITVRP-RFDVYKTASRRVMEILREEAGLIEQLSVDEAFMEPDELSGATPDGVRK 145 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + +R + + T L VG K AK+ + AK + ++ Q ++ Sbjct: 146 WAGHLRKRIREETGLPSSVGAGAGKQFAKIGSGLAKPDGTF------VIPVQDQHAILDP 199 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 LPV +WGIG KL +G++T+ A + +G + Sbjct: 200 LPVRKLWGIGPVAEAKLADIGVRTIEQFARMSRTDVEMALGKTNGPALWLLAQGHDPRPV 259 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 +++ +F + +T + + I + +A +L ++ + R ++ +K + F Sbjct: 260 AP-RAEAKQVSSESTFSDDVTTLDGVDEGIRAALTKAHRRLMNDGRGARTVTVKLKRADF 318 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + + S L T D + A+R G + GV L S Sbjct: 319 ERH------TRSETLPFSTTDWDVLYRVASRLAADPAVFGA-VRLVGVSLSGLESARQEA 371 Query: 358 LNLFDDNAPRPGSEQLMTV 376 L D + L Sbjct: 372 LFPDLDPSQGADYRALTEA 390 >UniRef50_A4RF27 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4RF27_MAGGR Length = 1201 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 72/381 (18%), Positives = 132/381 (34%), Gaps = 39/381 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+ KP VV N + + N A+ GVK G + Sbjct: 386 IMHVDFDSFFCAVSLKTAPEYIDKPAVVAHGNGTGSEIASCNYPAREFGVKNGMWMKRAL 445 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-------- 111 +L V ++ Y D S + E+ V+ S+DEA D+T + Sbjct: 446 ELCPTIKV--LPYDFPAYEDASRLFYGAILEIGGIVQSVSVDEALIDITTLVLEASSSSG 503 Query: 112 ----------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + ++RA + +RT V +G+ +AK+A AK + Sbjct: 504 VGVDEGSVWREQEKANELAADLRAEIKRRTGCNVSIGMGPNILMAKVALRKAKPAGQYQ- 562 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 E ++S L V+D+ G+ I KL+ +G++ V D+ + + Sbjct: 563 -----VKPEEILDILSGLKVEDLPGVAYSIKNKLEEVGVRLVKDVRELSRGRLTTILGPK 617 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 ER RG ++ + P ++ + ++G R P + + + ++L S Sbjct: 618 TGERLWEYSRGIDKAEVGDQ-PMRKSVSAEVNWGIRFVSQPEAEEFVMNLCKELEKRLLS 676 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 E + + I + + SV T + I A L Sbjct: 677 EGVKGKGFTMKIMRRSLDSPLDPPKHLGHGKCDVFNKSVAFGIATYSADFIGKEAVSILR 736 Query: 332 AIWQAGHRYQKAGVMLGDFFS 352 + A + GV L Sbjct: 737 SYNFAPGDLRGLGVHLSRLEP 757 >UniRef50_Q47E66 UMUC-like DNA-repair protein n=2 Tax=Betaproteobacteria RepID=Q47E66_DECAR Length = 387 Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats. Identities = 82/378 (21%), Positives = 141/378 (37%), Gaps = 44/378 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN----------------------DGCVIA 39 A D++AF+AS E + P+L G+PVVV N G V Sbjct: 14 IAHLDMDAFFASVELLNYPELRGQPVVVGGRNVNQPISQPDGTKRFGRLREYVGRGVVTT 73 Query: 40 RNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYS 99 EA+A GV G K ++ G + +N++ Y + S R + + ++P +E Sbjct: 74 STYEARAFGVFSGMGLMKSAEMAP--GTILLPANFDAYLNYSRRFKAAVATIAPLIEDRG 131 Query: 100 IDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 IDE + DL+ + R I+ V T LT +GI K L+K+ + K Sbjct: 132 IDEIYIDLSDIDEESLP--LARRIKQAVFDATGLTCSIGITPNKLLSKICSDLQKPDGIT 189 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 G+ + L + GIG + +++L+ +GI+T+ LA T + + HF Sbjct: 190 ILGIA------DIESRIWPLAAKKINGIGPKANERLEKLGIQTIGQLAATPVELLLNHFG 243 Query: 220 V-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT---DYPSMRQAICSYAARAA 275 + + G ++ + I +F + D + + R A Sbjct: 244 RSTGQWMHQVAHGRDDRPVKTS-RETKSISRESTFQRDLHAKQDRSELSEIFTGICLRVA 302 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 + L+ + + I ++ + F + L T D I AA L + Sbjct: 303 DDLKRKGLVAKTIGIKVRYADFQA------VTRDFTLDLATDDGMTIRRAAGECLKRVPL 356 Query: 336 AGHRYQKAGVMLGDFFSQ 353 R + GV S Sbjct: 357 E-KRIRLLGVRASALASA 373 >UniRef50_D2LRT2 DNA-directed DNA polymerase n=3 Tax=Bacillus RepID=D2LRT2_BACS4 Length = 424 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 88/416 (21%), Positives = 163/416 (39%), Gaps = 18/416 (4%) Query: 2 FALCDVNAFYASCETVFRPD-LWGKPVVVLS---NNDGCVIARNAEAKA-LGVKMGDPWF 56 D+ +FYASC + + + V+ ++A K G+K G+ F Sbjct: 13 ILCIDMKSFYASCAAIALGEDPLTSHLAVVGDTAREGSVILAATPALKRDFGIKTGNRLF 72 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR 114 + + +++ Y +S +V + ++ P + YS+DE+F D+ G Sbjct: 73 EVPK---DSKIKLVNASMATYLSISVQVTALFQQYVPPEAIHTYSVDESFLDICGTEKIW 129 Query: 115 D-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + +IR + +R L+ +GI ++K+ K Q G+ + + + Sbjct: 130 GNDRELALKIRDDLFKRFGLSCAIGIGPNMLMSKVCLDIEAKNQP--SGIAKWTYADVKT 187 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 KL P+ +WGIG +I +L +GI ++ LA+ + + K F V+ + G Sbjct: 188 KLWQISPLQKMWGIGSKIEARLHRLGIFSIGHLANYRLDKLEKVFGVMGNQLYYHAWGID 247 Query: 234 CLQL-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 ++ + S+ TD +++ I A + R E++ + IS I Sbjct: 248 FSEVGAPILNGQISYGKSQILMRDYTDKLEIKRVILEMCEEVAARARRENKAGQTISLGI 307 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 S A G + ++ PT + ++ A + D + G ++ + L + Sbjct: 308 GYSKVARER---GFHRQLTVVEPTNITMELYEACLKIFDKHYN-GSIVRQVSISLANICG 363 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 V QLNLFD + RP L VMD + K G + A R L Sbjct: 364 DDVIQLNLFDQDQLRPKKRDLGYVMDAIRKKHGPNAVLRAVSYANGGTARHRNTLV 419 >UniRef50_UPI0001B7B957 DinB1 protein n=3 Tax=Euteleostomi RepID=UPI0001B7B957 Length = 793 Score = 242 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 74/381 (19%), Positives = 125/381 (32%), Gaps = 39/381 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P+L KP+ V S + N A+ GV+ P F K L Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKEKPIAVGSM--SMLATSNYHARRFGVRAAMPGFIAKRL 159 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT---D 118 + ++ N++ Y +S V L E P S+DEA+ ++T R Sbjct: 160 CPQ--LIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQERQGWPEDK 217 Query: 119 FGREIRATVLQRTHL----------------TVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 I+ ++ + IA LAK+ + K + Sbjct: 218 RRYFIKMGNCRKIGILTLAMTTGNFHLLRLAQPQGCIAPNTMLAKVCSDKNKPNGQYQ-- 275 Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVL 222 + + + LP+ V GIG+ K L A+GI T +L Sbjct: 276 --IVPSRSAVMDFIKDLPIRKVSGIGKVTEKMLLALGIVTCTELYQQRALLSLLFSESSW 333 Query: 223 ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH 282 + G L ++ + R+F E I A L+ E Sbjct: 334 HYFLHVALGLGSTDLA-RDGERKSMSVERTFSE-INKTEEQYSLCQELCTELAHDLQKEG 391 Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR--- 339 R ++ +K F + + + + + + DI A L AG Sbjct: 392 LKGRTVTIKLKNVDFEVK------TRASTVPSAISTAEDIFAVAKELLRTEVTAGSPQPL 445 Query: 340 -YQKAGVMLGDFFSQGVAQLN 359 + GV + F + + Sbjct: 446 RLRLMGVRMSTFSNDDDRKHQ 466 >UniRef50_D1BHR1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=3 Tax=Actinomycetales RepID=D1BHR1_SANKS Length = 489 Score = 241 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 96/368 (26%), Positives = 159/368 (43%), Gaps = 19/368 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQKD 60 A D +AF+AS E RP L G+PV+V V+A + EA+A G + P + + Sbjct: 7 IAHLDADAFFASVEQHQRPSLRGRPVLVGGVGPRGVVATASYEARAYGARSAMPMEQARR 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTDF 119 + VV ++ Y+ S ++M L E+S +VE SIDEAF +L + + DL Sbjct: 67 MCPTATVVV--PRFDAYSAYSAQIMEVLREVSEQVEAISIDEAFAELDHLPGSSADLEAL 124 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 E R +RT L+V +G+ ++K +AKLA+ AAK G V + + + + AL Sbjct: 125 ALEFRRRAHERTGLSVSLGLGRSKLVAKLASEAAKP------GGVKVVDPADEDAFLLAL 178 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 PV +WG+G + +LD +G++TV DL + + R RG + Sbjct: 179 PVRALWGVGPVSAARLDQLGVRTVEDLRAQPMDTLVMATGEAAGTNLYRIARGWDDRPVT 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ +F + + ++ A+ A +L R + ++ + F Sbjct: 239 TV-RERKSAGAEHTFDDDLHGRRAIAAALDGVTDSALRRLDRHGVAARTVVVKVRVASFT 297 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + SV L PT D + AA R+LD + + + GV + L Sbjct: 298 ------TITRSVTLSRPTSDVDALREAARRALD-LAEVVEPVRLLGVSFHGLSAHSQLML 350 Query: 359 NLFDDNAP 366 L D Sbjct: 351 PLGGDGTE 358 >UniRef50_B9LT67 UMUC domain protein DNA-repair protein n=3 Tax=Halobacteriaceae RepID=B9LT67_HALLT Length = 476 Score = 241 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 85/401 (21%), Positives = 148/401 (36%), Gaps = 52/401 (12%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-----GCVIARNAEAKALGVKMGDPW 55 + D++ FYASCE + RP+L +P+VV + G V + EA+A GV+ P Sbjct: 20 IVFHVDMDCFYASCERLRRPELADEPLVVGMGYEAGEAIGAVATASYEARAFGVESAMPI 79 Query: 56 FKQKDLFRRC---------------GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSI 100 + DL R + + Y ++++ V + L + + + S+ Sbjct: 80 SEALDLLPRRVNADPDDPDAPDPDEAGRYLPVDLDFYKEVASDVKTVLRDCADVLREVSV 139 Query: 101 DEAFCDLTGVRNC----------------RDLTDFGREIRATVLQRTHLTVGVGIAQTKT 144 DEA+ D+T + R I+ + + + VG+A + Sbjct: 140 DEAYLDVTDRTAWDAAGGESTATGPAETRTLAEGYARHIKERIEREAGVPASVGVAPNMS 199 Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVL 204 AK+A+ A K + + +++LP ++ G+G + L +GI+T Sbjct: 200 TAKIASDADKPDG------LVVVPPGEVESFLASLPTAEIHGVGPVTERTLAELGIETAG 253 Query: 205 DLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 DLA D + R RG+ ++ + + S D R Sbjct: 254 DLAAADPDRLADELGDRGRELYRRARGDDDREVTPTGLP-KSLSRESSLS-ATADEERKR 311 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 + + + AA A + R R I A+ PY N+ + L P D + + Sbjct: 312 ETVRALAADVARRARERGCLYRTIGIK------AVEPPYEVNTRARSLPGPVDDPDLVES 365 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNA 365 A L AG R +K GV + Q L +A Sbjct: 366 VALDLLGEF--AGDRVRKLGVRVSKLDFAESDQATLGGFDA 404 >UniRef50_B0R4P0 DNA polymerase IV n=7 Tax=Halobacteriaceae RepID=DPO4_HALS3 Length = 411 Score = 241 bits (614), Expect = 5e-62, Method: Composition-based stats. Identities = 86/373 (23%), Positives = 137/373 (36%), Gaps = 28/373 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-----GCVIARNAEAKALGVKMGDPW 55 + D++ FYASCE P L G PVVV + G V + EA+ GV+ Sbjct: 17 IVVHVDMDCFYASCERRREPALRGAPVVVGMGYEPDQTVGAVATASYEAREYGVESAQAI 76 Query: 56 FKQKDLFRR--------CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 + R + Y +S V L L V SIDEA+ D+ Sbjct: 77 SAALERLPRKADAPDASAAGYYRPVDMAYYESVSESVSEILHGLGDPVREVSIDEAYLDV 136 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 T FGR I+ + + + VGIA + AKLA+ K + + Sbjct: 137 TDRTAWDVAAGFGRHIKQRIARSVGVPASVGIAPDMSTAKLASDHEKPDG------LVVV 190 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 E + ++ L V D+ G+G ++ L GI+TV +LAD D + F R Sbjct: 191 PPESVQSFLAPLDVADLHGVGPVHARALRERGIETVGELADADPYVLEAAFGERGREFHR 250 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 RG +E + + SF + +R+ + + A++ + R Sbjct: 251 RARGADSRPVEPRGKP-KSLSRESSFDGATESFDRVREQAAALSGAVADRASRTNASYRT 309 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 I + T P+ + + + L P D + + LD G +K GV + Sbjct: 310 IGVKVVTPPYDVQ------TRAESLPGPVDDPALLEAVSQSLLDEF--EGAAVRKVGVRV 361 Query: 348 GDFFSQGVAQLNL 360 + Q L Sbjct: 362 SNLVFSEREQATL 374 >UniRef50_O74944 DNA polymerase kappa n=1 Tax=Schizosaccharomyces pombe RepID=POLK_SCHPO Length = 547 Score = 240 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 79/361 (21%), Positives = 138/361 (38%), Gaps = 25/361 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AFYAS E + P L P+ V + N A+ GV+ P F + Sbjct: 131 IIVHVDCDAFYASIEELKNPKLKSLPMAVG---KSVLCTANYVARKFGVRSAMPEFIARK 187 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC------- 113 + +V N YA S + + L + + SIDE + +LT Sbjct: 188 ICPD--LVVIPLNLSEYAIKSKEIQNVLAQYDSNLCPASIDEFYMNLTSHLRLQELAFTV 245 Query: 114 RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 ++T +IR V + T +TV GIA K LAK+A++ K + ++ Sbjct: 246 ENITMVVEKIRKQVHEETGVTVSCGIAANKLLAKIASNKRKPNNQFFIPFDEI----GIS 301 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 K M+ LPV +V GIGR + ++L + IKT D+ + + +R G Sbjct: 302 KFMNDLPVREVSGIGRVLEQQLLGLEIKTCGDIQRNLVILSYIFLPKSFQNLLRCSYGFG 361 Query: 234 CLQLEEF-APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 L+E+ ++ I +F ++ + + +E L+ I+ Sbjct: 362 TTILDEYGESKRKTIGSEATFSSNLSSPSIIEYKLRLLVQNVSENLQKRGLVTNSIAIKY 421 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 KTS F ++ + + D++ A + L + + GV S Sbjct: 422 KTSEFQVH------TKQKSIGQFIHSESDLLKPALQLLRQSY--PMTIRLLGVRATKLVS 473 Query: 353 Q 353 + Sbjct: 474 K 474 >UniRef50_A6UXE7 Ultraviolet light resistance protein B n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6UXE7_PSEA7 Length = 360 Score = 240 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 162/358 (45%), Positives = 218/358 (60%), Gaps = 5/358 (1%) Query: 64 RCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREI 123 G V + D+S RV+ L EL+PR+E+YSIDE+F DL G+ L +GR I Sbjct: 7 EHGPVLIDFLLHINGDVSARVVRVLRELAPRLEVYSIDESFLDLAGLGRP--LAGYGRHI 64 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 RA V + T + VGVGI+ TKTLAKLAN AAK+ + V E+Q L+ P+ + Sbjct: 65 RAEVQRLTGMPVGVGISTTKTLAKLANWAAKRRSQSGVVVAT--RPEQQAALLKDAPLGE 122 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 VWG+GR++ L A+G+KT DLA D +RK F+VVLE+T+RELRGE C L+E Sbjct: 123 VWGVGRKLQAHLGALGVKTAWDLAQQDAWTMRKQFSVVLEKTIRELRGEACFALDEGPEP 182 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 KQ I CSRSF R+T+ +R+A+ SYA RAAEKLR++ C+ + +I+T F +EP Sbjct: 183 KQMITCSRSFSRRVTELAPLREAVASYACRAAEKLRAQGDVCQLLQVYIRTGVFNPDEPR 242 Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD 363 Y +ASV L TP+ DSRD++ AA L+ I++ G+RYQKAGVML + S G Q +LF Sbjct: 243 YARTASVPLHTPSNDSRDLVQAALAGLEGIYRPGYRYQKAGVMLMNLASPGQVQADLFAP 302 Query: 364 NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 P S LM +D +N GRGT+ A W MK+ + SP YT R +L RV Sbjct: 303 APR-PRSAALMATVDRINTNMGRGTVRLARVPALGGWSMKQELRSPGYTCRWDELPRV 359 >UniRef50_C1A0W3 DNA polymerase IV n=9 Tax=Corynebacterineae RepID=C1A0W3_RHOE4 Length = 454 Score = 240 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 101/418 (24%), Positives = 163/418 (38%), Gaps = 31/418 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQKD 60 D++AF+AS E + RP L G+PV+V V+A + EA+ G + P + + Sbjct: 13 VLHLDMDAFFASAEQLTRPTLRGRPVLVGGLGGRGVVAGASYEARVFGARSAMPMHQARR 72 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAF---CDLTGVRNCRDLT 117 + G V LY+ +S R L P +E S+DEAF +L GV + Sbjct: 73 MV-GGGAVVLPPRMSLYSVLSKRTFDALRLRMPILEQLSVDEAFGEPVELAGVGADE-VR 130 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 F ++RA + T L +G K +AK+A+ AK V + Q +L+ Sbjct: 131 AFCEDLRALIKAETGLVASIGAGAGKQVAKIASGLAKPDG------VAVIPPGMQHELLD 184 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQ 236 LPV +WGIG +KL +GI+T+ A T I + R +G Sbjct: 185 PLPVRKLWGIGPVAEEKLKRLGIETIGGFARTPIAEVASILGTTVGPGLHRLAQGIDDRP 244 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + E ++I +F I +R A+ S A +L + + R + +K S Sbjct: 245 VAE-RAESKQISAESTFAADIVTMAQLRAAVESSGRAAFSRLEKDGRAARTVVLKLKKSD 303 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + SV L T D + ++ A + + + G + GV V Sbjct: 304 ------MSILTRSVTLPFATIDRQILVATAQKQVIDPQELG-PIRLVGVGFAGLS--TVR 354 Query: 357 QLNLFDDNAPRPGS---EQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 Q +LF + E L +D + A + Q+ W + P Y Sbjct: 355 QGSLFPELDQDVPGYPVETLTGALDEA-----ELDVPVAARVPQRYWHPGLDVKHPEY 407 >UniRef50_C1A9Y5 DNA polymerase IV n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9Y5_GEMAT Length = 441 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 83/436 (19%), Positives = 156/436 (35%), Gaps = 43/436 (9%) Query: 2 FALCDVNAFYASCETVFRPDLWGKP--VVVLS--NNDGCVIARNAEAKALGVKMGDPWFK 57 L D +AF+ + P+ GK ++V + G V + + E +A GV+ P + Sbjct: 12 ILLVDADAFFVAVARQEDPEGAGKATLLIVGGRPGSRGVVCSASYECRAYGVRSAMPISR 71 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-- 115 L + V + S + + L + +P V+ SIDE +CDL G Sbjct: 72 ALKLCPQAMCVPVPRHVCGTR--SREIQAVLAQFAPVVQPSSIDEWYCDLGGTEALYGHE 129 Query: 116 -LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 L + R +R V T L V +G ++ +AK+A AK V + + Sbjct: 130 PLEETARRMREAVFAATGLRVSIGGGTSRLVAKMAVEVAKPKPGTGATGVRCVPPGTEAE 189 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEP 233 +S + D+ +G R + KL+ MG++T+ + + R +RG+ Sbjct: 190 FLSRFKLADLPMVGPRFATKLERMGLETIAQAQQWTEDTLVHRLGDRAGQWLSRRIRGQD 249 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + +++ +FG + + + + + A R + LR + R I+ ++ Sbjct: 250 ESIVRPRDRQ-KQVSRETTFGRNLHEDDVVERELLRLAVRVSADLRRQALRARTITVKLR 308 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGDF-- 350 F SA L + ++ AA L + + + G+ L F Sbjct: 309 DGDFR------TRSAQRTLSGFIESEHSVVRAAKPLLRQMRKTRRAPVRLLGIALSHFED 362 Query: 351 --FSQGVAQLNLF--------------------DDNAPRPGSEQLMTVMDTLNAKEGRGT 388 + QL LF D+ P L+ +D + + G Sbjct: 363 DEEPRPAVQLGLFPSAFKGPGASPPDADGSALSDEPTETPRDRALVQALDRIRGRFGADA 422 Query: 389 LYFAGQG-IQQQWQMK 403 + A + + Sbjct: 423 IIPARLVDPSRDTGPR 438 >UniRef50_C7DHN7 DNA-directed DNA polymerase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHN7_9EURY Length = 350 Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 70/363 (19%), Positives = 131/363 (36%), Gaps = 22/363 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D++ F+A+CE P+L G+P+ V G V N EA+ G++ G P Sbjct: 3 LVIYIDMDYFFAACEEKRHPELKGRPLAVGTSDSADKLRGVVQTCNYEARKYGIRSGMPT 62 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 K L++ V ++ Y ++SN +M L L +E SIDEA D+ G Sbjct: 63 LKAFQLYKDLQYV--KADDAYYEEVSNAIMEYLSSLGFPLEKMSIDEAAIDV-GDLGYGK 119 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + I+ + QR L +GI+ K AK+A AK + + + Sbjct: 120 ANELAERIKEEIKQRLGLPCTIGISIGKVFAKMACDKAKPDG------LLTLDEVHLHEF 173 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + + V + G+G + +KL AMG+K++ D+ + D + F G Sbjct: 174 LKSTDVKKLPGVGSKSYEKLSAMGVKSIADIRNIDPLRLVDEFGSFGRELYALAGGIDES 233 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ I R+ + + + +L + ++ Sbjct: 234 KVVSEERVL-SISRERTLRGLEDQQKEIDSMLEVLSKEVIAELNKRKMEFGGVGVKVRYV 292 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F+ L + + + A + + +A +K GV + Sbjct: 293 DFSEKV------RDRSLSYYSNSYDVLYSNAVSMIRELSRANK-VRKIGVKAYRLGNMSG 345 Query: 356 AQL 358 + Sbjct: 346 QKK 348 >UniRef50_A4RZX2 Predicted protein (Fragment) n=2 Tax=Ostreococcus RepID=A4RZX2_OSTLU Length = 427 Score = 238 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 78/353 (22%), Positives = 138/353 (39%), Gaps = 22/353 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + + D++ FYA+CE ++ P L PV V + + N A+ GV+ P F K L Sbjct: 88 WLVVDMDGFYAACEELYDPALKSVPVGVAAGPSSVLTTANYVARKYGVRAAMPGFIAKKL 147 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 +V +++ Y SN + +P S+DEA+ ++T D + Sbjct: 148 CPD--LVFVKPDFKKYVKASNESRGVFAQYNPDYIAGSLDEAYIEVTEYCEKHDTTMEAI 205 Query: 120 GREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 EIR+ V + T LT VG ++ LAK+ + K + G + K + Sbjct: 206 AEEIRSKVKEATGGLTCSVGGGCSRRLAKVCSDFNKPNGQYILGT----TRDDILKFLRD 261 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV ++GIG+ + + L+ IKT DL + + + G Sbjct: 262 LPVRKMYGIGKTLERILNEFDIKTCGDLLAKRATMLALFTPKAFDFLLGIALGIGTECHP 321 Query: 239 EFAPT----KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 P ++ + S +F + D + + A A + + + R ++ +K Sbjct: 322 RETPEGSGGRKGVSKSETF-KATADKAYLDAKMTELATEVALECQRLNLKGRMVAVKLKR 380 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH--RYQKAGV 345 S F + + L PT D + I+N+A R + G + G Sbjct: 381 STFDVIQ------RQTTLAGPTNDVKTIVNSALRLMRNENSIGANMTLRLVGA 427 >UniRef50_D1Y4D1 DNA polymerase IV n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4D1_9BACT Length = 412 Score = 238 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 74/389 (19%), Positives = 131/389 (33%), Gaps = 22/389 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 D++AFYA+ E P L G+P+++ + G V + EA+ GV + Sbjct: 5 VIHVDMDAFYAAVEIRDNPALKGRPLIIGALPDERGVVATCSYEARKFGVHSAMNIKEAY 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTD 118 R + N E Y S+R+ + E ++DE + D+T Sbjct: 65 RRCPRG--IFMHPNREKYRQASDRLHGIWSSYADVAEYVALDEGYLDVTRSALRFGGARR 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R I+ T LT VG+ +KT AKLA+ K + L+ Sbjct: 123 VARLIKERTRAETGLTCSVGVGYSKTSAKLASEEKKPDGYFE-----ILTPRDFIGLIID 177 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + ++G+G R ++KL GI TV D+ + R G + Sbjct: 178 RDITVLYGVGARTAEKLYHAGIHTVRDVQNNRERLAALLGGKTGRHLAELSLGIDDRPVI 237 Query: 239 EFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + I +F + + + +R I + ++L + R ++ Sbjct: 238 PADEADAKSISREVTFQKDTSHFGYLRDVILLLSLNLGDRLAALGLNGRTVTLKATYWN- 296 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S +I A + L I ++ + GV L + Q Sbjct: 297 -----MKTITRSHS-GESVDHPYEIYQAGSALLAGIEKS--PVRLIGVGLQNLSETYARQ 348 Query: 358 LNLFDDNAPRPGS--EQLMTVMDTLNAKE 384 L + R E+L + L + Sbjct: 349 LTFDTLDGERERRHAERLRARLLDLQRRY 377 >UniRef50_Q03R40 Nucleotidyltransferase/DNA polymerase for DNA repair n=1 Tax=Lactobacillus brevis ATCC 367 RepID=Q03R40_LACBA Length = 371 Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats. Identities = 69/365 (18%), Positives = 137/365 (37%), Gaps = 19/365 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-----NNDGCVIARNAEAKALGVKMGDPWF 56 D++AFYAS E P P+++ G V N A+ LGV Sbjct: 11 IIHVDMDAFYASIEERDHPAFKQHPLIIAQDPRKTGGRGVVATANYAARQLGVHSAMNAN 70 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRD 115 + L + + N+ LY +S+++ E + ++E + DEA+ D+T + Sbjct: 71 EALKLAPQ--AIFQPPNFPLYRQISDQIHEIFHEYTDKIEPVAFDEAYLDVTENKHHLHS 128 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 EI+ + ++THLT GI+ +K LAK A+ K V + E Sbjct: 129 AVQVAHEIQVEIFEKTHLTCSTGISYSKFLAKEASDFRKPVG------VSVILPEDAHDF 182 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 + ALP++ G+G++ K+ +G + + V L E Sbjct: 183 LMALPIERFRGVGKKTVPKMHELGNSYLEPTCIIGQSWPSFMSLVNLAMFCISGSEELTS 242 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + ++ I R++G +T + + A A ++ + ++ + + ++TS Sbjct: 243 GRLPYQRERKSIGKERTYGPPLTTLGEVENQLQRLAEMVAATVQEKQRHGKTLVLKLRTS 302 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F Y + D++ + A ++ + + G+ + +Q Sbjct: 303 AFKTLTKRYTQA-----DFIANDAQTYYDLALDLYQSVAGENEQVRLLGITITGLAAQTF 357 Query: 356 AQLNL 360 + L Sbjct: 358 ENVRL 362 >UniRef50_A9NFG9 DNA polymerase IV n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NFG9_ACHLI Length = 383 Score = 236 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 87/377 (23%), Positives = 144/377 (38%), Gaps = 23/377 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + D+NAFYA+C + P L + VV G V + +A+ G+ G Sbjct: 21 VIFHIDLNAFYATCAMIKEPHLKHRVFVVGGQSSQPRGVVSTASYKARKYGIHAGMSMLD 80 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 + F R +V +++ Y +MSN+ M L+ S V SIDEAF D+T Sbjct: 81 ALNKFPRLLIV--PVDFKFYREMSNKFMEVLDAYSDLVLQASIDEAFLDMTKASEEIHPI 138 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 ++I+ ++ + L +GIA T LAK+A+ K + KL+ Sbjct: 139 KLAKKIQKELVDKYQLPTSIGIAPTLFLAKMASDMKKPLGI------TVLRKRDVEKLLY 192 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTD--IRFIRKHFNVVLERTVRELRGEPCL 235 L V D++GIG++ KL A+GI T+ D D + R + G Sbjct: 193 PLSVTDIYGIGKQTYPKLMALGINTIKDFMDLSNLPKITRVMKEETYYSFREYILGNSSN 252 Query: 236 QLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 ++ + I +F + + + I S + +L+ + + + +K+ Sbjct: 253 VVDPDKYRLPKSISAETTFNTNMDEPSVILDIIMSQLDESLVRLKKYNMLTKTVGFKLKS 312 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD--FFS 352 S F + S L T D I T + + G Y+ AG L + S Sbjct: 313 SDFK------SITRSKTLEDYTNDPEIIKYELTSLFENEF-EGGIYRLAGASLSNLILHS 365 Query: 353 QGVAQLNLFDDNAPRPG 369 NLF Sbjct: 366 DNEIPFNLFTYEKFITK 382 >UniRef50_Q4KWZ7 REV1 protein n=9 Tax=Euteleostomi RepID=Q4KWZ7_CHICK Length = 1255 Score = 236 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 58/328 (17%), Positives = 117/328 (35%), Gaps = 21/328 (6%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + + + EA+ G+K G + + K L V S ++ Y +++ V L + +E Sbjct: 519 IASCSYEARQAGIKNGMFFGQAKKLCPNLQAV--SYDFNAYKEVAQTVYEILASYTHNIE 576 Query: 97 IYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DEA D+T + + IR + +T T VG+ LA++A AK Sbjct: 577 AVSCDEALVDITEILTETRLTPDELANAIRDEIKAQTKCTASVGMGSNILLARMATRKAK 636 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + E + V ++ G+GR + KL ++GI+T DL + + Sbjct: 637 PDGQYH------LKPEEVDDFIRGQLVTNLPGVGRSMESKLASLGIRTCGDLQCASMSKL 690 Query: 215 RKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 +K F + R RG + ++ + ++G R T + S + Sbjct: 691 QKEFGPKTGQMLYRFCRGLDDRPVRTEK-ERKSVSAEINYGIRFTQPKEAEAFLLSLSEE 749 Query: 274 AAEKLRSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 +L + + ++ I + + + + +V L T ++ I Sbjct: 750 IQRRLEAAGMKGKRLTLKIMVRKAGAPVEPAKYGGHGICDNIARTVTLDHATDSAKVIGK 809 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + + G+ + Sbjct: 810 ETLNMFHTMKLNISDMRGVGIQVQQLVP 837 >UniRef50_C6WX69 DNA-directed DNA polymerase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WX69_METML Length = 409 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 89/408 (21%), Positives = 162/408 (39%), Gaps = 25/408 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D N+++AS E P+L GKP+ V + C IA + EAKA G+K G + + Sbjct: 6 LYVDFNSYFASVEQQLVPELRGKPIGVLAVMAETTCCIAASYEAKAFGIKTGTLVSEARK 65 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDF 119 L ++ + +Y + ++ +E + ++ SIDE C LTG + D Sbjct: 66 LCPD--IIFVEARPPVYVQYHHFLIDIVESCTHVEKVLSIDEMVCKLTGSQQQPDNALKL 123 Query: 120 GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +I++ + ++ + +GIA LAK+A++ K L + + Sbjct: 124 AAKIKSVLAEKAGSFIRCSIGIAPNTYLAKVASNMQKPDG------CVLIVFNELPQRLY 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 L + D+ GIG+++ +L+ I TV L + + ++ + V ER +LRG Sbjct: 178 GLKLRDLNGIGKQMEARLNRYKITTVEQLYAANRQQLQVAWGSVEGERMYDKLRGIEPYY 237 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 ++ + + S + +R + +A ++RS IS +K Sbjct: 238 VKNA---RSSLGHSHVMPPEQRNEVGVRAVLHRLLQKACMRMRSYDLLASRISVKVKFRN 294 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + S PT ++ +I A + GV + Sbjct: 295 KPSWQKESALS-------PTDNTLRLIEALEAFMQHYPVTDAEPYAVGVSFSGLVTADEV 347 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 +LF AP +L +D+LN+K G+ T+YF G + R Sbjct: 348 ARDLF-QVAPLENERKLNQAIDSLNSKFGKNTIYFGGAHEALKDAPMR 394 >UniRef50_D2R017 DNA-directed DNA polymerase n=2 Tax=Planctomycetaceae RepID=D2R017_9PLAN Length = 398 Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats. Identities = 109/396 (27%), Positives = 167/396 (42%), Gaps = 22/396 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D + FY S E V L KPV VL N CVIA++ E K GVK G+P ++ Sbjct: 2 LIAHLDADCFYVSAERVRDRFLADKPVGVLGNQGACVIAKSYEMKKAGVKTGEPIWEALT 61 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 V ++ Y +S ++ + E SP+VE YSIDE F + + F Sbjct: 62 KCPDGIYV--KRDFRWYEVLSRAMLDVVREFSPQVEYYSIDEFFLSVD-----QSPASFA 114 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 E++ +L R + V +G+A+T+TLAKL + AK + G + L E + +L+++ P Sbjct: 115 HELQQAILDRVGVPVTIGVARTRTLAKLVSDLAKPF-----GALALIGREAEEQLLASRP 169 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 DV GI R + KL + GI T LDLA D +R V ER ELRGE C+ ++ Sbjct: 170 ASDVTGIAERSAAKLRSFGIVTCLDLARADPTQVRSVLTVTGERLCYELRGEKCVPIQSK 229 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 P + + S G +D R E L S ++ + + Sbjct: 230 RPLHKIVSRGGSIGAPSSDPAIQWAWCVRNLERLIEALESYGLCAGKLAFAV---DYKHG 286 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 ++ L PT ++ AA + G + + G QL L Sbjct: 287 PTCAADTR---LTFPTTRFDMLVEAARHLWKQVQMQGLLLYRMHYFASELQYPGPRQLGL 343 Query: 361 FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 F+ + L + +N++ GR L A Sbjct: 344 FEPT----IRDGLHALKSEINSRHGRFALRSAATLP 375 >UniRef50_A2FMN4 ImpB/MucB/SamB family protein n=1 Tax=Trichomonas vaginalis RepID=A2FMN4_TRIVA Length = 519 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 81/361 (22%), Positives = 144/361 (39%), Gaps = 17/361 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 + CD+++F+AS E + P L G V + G + + EA+ GV+ G F Sbjct: 91 YMHCDLDSFFASVEALLDPSLKGTAFAVGGSVKRGIISTSSYEARKYGVRSGMAVFVAMK 150 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDF 119 L VV + ++ + Y + S +V ++ P + DEA D+T + N Sbjct: 151 LCPHLNVVHY-NHGDKYMNFSKQVQEVFKKYDPEFVSFGCDEATLDITPLLNDNLHSDQL 209 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++I+ V +T LTV +G+A T L+K+A+ K D + + + L Sbjct: 210 AKQIQQEVFDKTKLTVSIGVAHTPQLSKIASDINKPNGIFIVPKND----DDLKSFLHTL 265 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + GIG + L +GI+T D+ + G + E Sbjct: 266 PVRKIPGIGGVNEQILKGIGIETCGDILLKKAEIWLTMSHKFCRFVFSAAVGVQPREYES 325 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q I R+ D ++ + S A + ++K++ CR ++ K F + Sbjct: 326 G--PQQSISKDRTID-ATDDKCTLIDLVESLARKISKKMKKMRIACRNVAVKFKDINFKV 382 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDFFSQGVAQL 358 S S T D D++NA+ + L Q + + GV + S G + Sbjct: 383 ------ISKSYTFDYDTSDESDLVNASLKLLLEERQERSIKLRLVGVKATNLTSPGDKKQ 436 Query: 359 N 359 + Sbjct: 437 S 437 >UniRef50_C8W7V4 UMUC domain protein DNA-repair protein n=12 Tax=Bacteria RepID=C8W7V4_ATOPD Length = 447 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 93/431 (21%), Positives = 156/431 (36%), Gaps = 33/431 (7%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + + D+ +FYAS E V R D +VV +A + +ALGV F+ Sbjct: 8 YLVIDLKSFYASVECVERGLDPMKAKLVVADLTRTEKTICLAVSPALRALGVPGRCRVFE 67 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRD 115 + + LY + S V S + + +YSIDEAF D+T + Sbjct: 68 ---IPKNLTYEVAPPRMALYIERSADVYSVYLKYIAPEDIHVYSIDEAFIDVTPYLSLYG 124 Query: 116 --LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + G +IRA V + T + G+ LAK+A K G +L + Sbjct: 125 CTARELGEKIRADVAKTTGIPATCGLGPNLYLAKIALDITAKHSPNFFG--ELDEESYKL 182 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 KL + P+ D W IG I K+L+AM I T+ LA I + K F V E + G Sbjct: 183 KLWNHKPLTDFWHIGTGIQKRLEAMNIHTMGQLAMAPIEPLYKEFGVDAEILIDHAWGIE 242 Query: 234 CL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 ++ + + ++ F D R +L ++ C I Sbjct: 243 PTTIADIKNYKSQSHSVSTAQVFDHN-RDTEGARFIFKEMVEALTLELVTQKLVCSSIGI 301 Query: 291 FIKTS-------------PFALNEPY-YGNSASVKLLTPTQDSRDIINAATRSLDAIWQA 336 +I S + + +S + KL+ PT +++ D Sbjct: 302 YIGYSATESQMEELRKTGDYRSWRRHIPSSSGTKKLIYPTNSRDELMAEVLSFFDERVLP 361 Query: 337 GHRYQKAGVMLGDFFSQG--VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 + G+ G+ + Q +LF D Q ++ + K G+ +L A Sbjct: 362 SESVHRVGLTFGNTQEETNSGIQTSLFQDTYGLEKERQRQDTINAIKKKFGKNSLLKAMD 421 Query: 395 GIQQQWQMKRA 405 + + +R Sbjct: 422 LLSEATARQRN 432 >UniRef50_C1XFZ1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XFZ1_MEIRU Length = 419 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 160/410 (39%), Gaps = 27/410 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAF+AS E RP+L GKPV V+ C IA + EAK G+K G + Sbjct: 16 YLFLDMNAFFASVEQQLRPELRGKPVAVVPMLAETTCCIATSYEAKRYGIKTGTLVQDAR 75 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTD 118 L +V + Y + ++++ ++ + P + SIDE C L G + Sbjct: 76 LLCPGLELV--EARPREYIRVHHQILQAVDSVLPVEAVLSIDELVCKLMGREREPENALQ 133 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 GR+++ + +R L VG+ + LAK+A K + L + Sbjct: 134 LGRQVKEAIYRRVGGQLRCSVGLGPNRFLAKVAAEMHKPDG------LTLLQPSDLPHRL 187 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN--VVLERTVRELRGEPC 234 +L + D+ GIG + ++L G+ TV L + + + V LRG Sbjct: 188 YSLQLRDLPGIGPGMERRLFKHGVTTVEGLYRLSALQLAQVWGSRVHGLAWWHRLRGAD- 246 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 L E ++ + S + R + RAA +LR E + ++ F++ Sbjct: 247 --LPETPTRRRSLGHSHVLPPALRSEAGARAVLTRLVHRAAARLRHEGYWAGSLALFLRF 304 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + P+QD+ ++ + G + K G+ LG Sbjct: 305 LDGGEQRKWEAQIR----IQPSQDTLTLLRVSLGLWQQ-KPEGTPF-KVGIALGHLTPAL 358 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 LF+ +L MD N+K G LYFAG +Q + R Sbjct: 359 ELSEPLFESEQ---KLVRLAQAMDKANSKYGPQALYFAGMHRTEQSAVTR 405 >UniRef50_A5IXL3 DNA damage repair protein MucB n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IXL3_MYCAP Length = 415 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 75/406 (18%), Positives = 163/406 (40%), Gaps = 21/406 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQK 59 + D ++++ S L KPV V + + + + E K G+K+G P F + Sbjct: 6 IIFHIDFDSYFVSAHRSKDHRLKNKPVAVSNGLSRSICSSISYELKNAGIKVGWPRFMIE 65 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNCRDLTD 118 + N++LY SN + + + +E+ SIDE + D+T + ++ Sbjct: 66 KKAPET--IFVEPNFDLYYTTSNNIFDYIASNYTANIEVGSIDECWVDVTAIAEGKNPVA 123 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R+++ + + + + +GI+ +K AK+A+ AK + GV + N + Sbjct: 124 LARKLQEDINEIFDIPISIGISYSKWAAKIASDLAKPF-----GVKFIENHNDLETQIWP 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTD--IRFIRKHFNVVLERTVRELRGEPCLQ 236 L + +GIG + + KL +KT+ LA + + F L + E G + Sbjct: 179 LNIQKYYGIGEKTADKLIKADVKTIGQLARSSELNSDLYMIFRNRLSAFINEANGNGNDK 238 Query: 237 LEEFAPTKQEIICSRSFG-ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 L + I +F + + + I + A + + + ++ + ++ I++ Sbjct: 239 LTYEHNNLKGIGNELTFPLYDFYERSEIYKVIKNIAYKVSHRAQNRNVVGFTLTVIIRSV 298 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 +KL+ PT D+ I A + +W+ + G+ L + ++ Sbjct: 299 S------KVWKGKQMKLVEPTNDAEQIYKNAIILFEKLWKE-QPIRGVGLRLTNLINEFE 351 Query: 356 AQLNL--FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 L FD ++ +++ +N K G+ L + +++ Sbjct: 352 HFKQLTIFDTYDDYKQESKVNNIINDINKKVGKVVLKTGYRVSKEK 397 >UniRef50_Q4S0P1 Chromosome 2 SCAF14781, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4S0P1_TETNG Length = 1313 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 64/355 (18%), Positives = 130/355 (36%), Gaps = 27/355 (7%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + + + EA+ GV+ G + K K L V ++E Y +++ + TL + +E Sbjct: 627 IASCSYEARQAGVRNGMFFGKAKQLCPSLQAV--PYDFEAYKEVALTMYDTLAGYTHDIE 684 Query: 97 IYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DE D + + + + + IRA + ++T VG+ LA+LA AK Sbjct: 685 ALSCDELLMDTSALLAELCVNPEELAKAIRADIKEKTGCCASVGMGSNILLARLATRKAK 744 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + E + LPV + G+G +S+KL AMG+++ DL + + Sbjct: 745 PDGQYF------LRSEDVDDFIRDLPVTSLPGVGPVMSRKLAAMGVRSCGDLQQVSMSQL 798 Query: 215 RKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 +K F + R RG + + ++ + ++ R T + + + Sbjct: 799 QKKFGPRTGQTLFRFSRGLDDRPV-RYEKERKSVSADMNYNIRFTTVDEAECFLTNLSME 857 Query: 274 AAEKLRSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 ++L+ R ++ + + + + + +V L T D R I Sbjct: 858 VQKRLQEAGLRGRRVTLKVMVRKVGAPQEPAKYGGHGICDNLARTVMLAASTDDGRLIAA 917 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 A + A+ + G+ + +A ++D Sbjct: 918 AVIKLFHAMKLQVQDLRGVGIQVQLLDGNAHQ------ASAGPRKRSIKDMLLDQ 966 >UniRef50_A0AM11 Complete genome n=24 Tax=Listeria RepID=A0AM11_LISW6 Length = 418 Score = 235 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 96/418 (22%), Positives = 163/418 (38%), Gaps = 19/418 (4%) Query: 1 MFALC-DVNAFYASCETV-FRPDLWGKPVVVLSNN---DGCVIARNAEAKA-LGVKMGDP 54 + +N F+AS E V R + +VV+SN G V+A + K +K G Sbjct: 5 VIFYVLILNRFFASVECVKRRLNPLDAYLVVMSNAERAGGLVLAATPKMKQDHHIKTGSR 64 Query: 55 WFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLTGVRN 112 ++ ++ +LY ++ + + + P + +YSIDE F D+TG Sbjct: 65 MYELPTW--DKRIIIAPPRMKLYLKVNAMIQAIFKRYVPAEFIHVYSIDECFLDITGSHL 122 Query: 113 CRD-LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + R+I+ +L+ L V VGI LAKLA K + G+ + + Sbjct: 123 LFGSTEEIVRKIQRDILEELRLYVTVGIGDNPLLAKLALDNVAKN--RDDGIAEWRYADV 180 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + +DDV GIGRR +L MGI + L+ T ++K V+ E+ G Sbjct: 181 PETIWKIRHLDDVCGIGRRTVVRLQKMGIFNMYQLSQTPPPVLKKAMGVIGEQLYYHAHG 240 Query: 232 EPCLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 L E + P + S+ + I A +LR H I Sbjct: 241 IDYSLLNEKYVPVSKSYGKSQILERDYHASAEVEIVIREMVEEVAMRLRQNHVDTAVIHL 300 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 I S +++ + G S K+ + T S +I + + + + G Sbjct: 301 SIGYSKYSIKK---GFSHQAKIPS-TSSSHALIPYFLQLFRR-YDEREPVRSIAISCGKI 355 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 + QLNLF+D + EQL +D + + G +L A + +KR+ + Sbjct: 356 TLKTGLQLNLFEDTSHTLNQEQLEITVDKIRTRYGFKSLMHASSLLNGATGLKRSEMV 413 >UniRef50_C8WYD4 DNA-directed DNA polymerase n=4 Tax=Alicyclobacillus acidocaldarius RepID=C8WYD4_ALIAD Length = 418 Score = 234 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 86/423 (20%), Positives = 157/423 (37%), Gaps = 31/423 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLW----------GKPVVVLSNN---DGCVIARNAEAKAL 47 ++ L D+ +FYASCE R + P+VV + G ++A AK Sbjct: 5 IYGLVDMQSFYASCEVASREEYAARRKEFDDSTDPPLVVSGDPARRSGIILAATPTAKRY 64 Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 GV+ + L+ R ++ + Y +S R+ +++ P E +S+DE F Sbjct: 65 GVENAMRLGEALRLYPR--LIVVRPHMAFYLHVSVRIQMLMQQCFPFQEQFSVDEGFIAF 122 Query: 108 TGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL 166 N D R ++A + + + +G+A K LAK+AN A ++T G + Sbjct: 123 PYPSNLFPDPIAAARNLQARIWDQFRIRARIGLAPNKWLAKMANKA----AKKTPGGIVW 178 Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 E ++ LPV+++WG+ RR +T+ D+A + ++ F V E Sbjct: 179 WREEDIPSVLHPLPVEEMWGLKRRAEVLRRKFKCETIGDVARLPVGVLKAEFGVWGEVIH 238 Query: 227 RELRGEPCLQLEE--FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 R G + + + + + + I +LR HQ Sbjct: 239 RWANGIDVSDINPDSYHAPHKGFSHRTTLPRDFYERSEIAVVILELLDEVCHRLRQAHQA 298 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 R + + G + L T D ++ LD W G + Sbjct: 299 GRRVGLGLTY-----EGLTGGFYRARTLPRATNDPAELYPVLLALLDEHWD-GSGVRAVS 352 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 V + + QL+LF P +L +D + A+ G ++ A + +R Sbjct: 353 VAVDMLQFRETLQLSLF---ENVPARTRLYETVDEIRARFGETSIMRAVSLTRAGQLRER 409 Query: 405 AML 407 ++ Sbjct: 410 SLR 412 >UniRef50_A1SN18 DNA-directed DNA polymerase n=13 Tax=Actinomycetales RepID=A1SN18_NOCSJ Length = 362 Score = 234 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 93/365 (25%), Positives = 141/365 (38%), Gaps = 26/365 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN----NDGCVIARNAEAKALGVKMGDPWFK 57 D++ F A+ E + RP+L G+PVVV G V + EA+A GV G P Sbjct: 10 VLHVDLDQFIAAVEVLRRPELAGRPVVVGGRGDPTERGVVATASYEARAFGVGSGMPLRV 69 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS----PRV-EIYSIDEAFCDLT-GVR 111 V + E Y S +VM+TL L P V E+ DEAF Sbjct: 70 AARKCPD--AVFLPVDKEAYDAASAQVMTTLRGLEWGGVPVVLEVLGWDEAFLAAGEDHG 127 Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + +F +RA VL T L VGI K AK+A K D Sbjct: 128 ELGNPREFAEHLRAEVLAETRLHCSVGIGDNKLRAKIATDFGKPRGVWQLTEADWFP--- 184 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELR 230 +M P +WGIG R +KKL A+GI TV LA +D R + R R Sbjct: 185 ---VMGERPTTALWGIGARTAKKLSALGIDTVEQLARSDARVLAAELGPTMGPWFHRLGR 241 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G ++ + ++ E + D+ + + + + R + + E + + Sbjct: 242 GVDTSPVDATPWVPRAHGREETYQEDLEDWDRVTEEVRALTRRVVDDIDREGRPAARVGI 301 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 ++ PF+ S S+ L P+ D + +AA L+ + + G + GV L Sbjct: 302 KVRYRPFS------TVSRSLTLPEPSNDPAVLEDAAVSLLERVER-GRPVRLLGVRLEMV 354 Query: 351 FSQGV 355 Sbjct: 355 DPPEG 359 >UniRef50_A8Z6F4 Umuc domain protein dna-repair protein n=2 Tax=Campylobacter RepID=A8Z6F4_CAMC1 Length = 422 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 88/418 (21%), Positives = 173/418 (41%), Gaps = 24/418 (5%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++A+ D+ +FYAS E V R D + +VV + G +A + +A GVK F Sbjct: 10 IYAVIDLKSFYASVECVERGLDPFKADLVVADASRGSGGICLAVSPALRAKGVKNRCRLF 69 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCR 114 + + R + + Y D + R+ + + +YSIDE F DLT Sbjct: 70 E---IPRDVKFIIAPPRMQFYIDYAARIYEIYLKYVSKEDIYVYSIDECFIDLTSYLKFY 126 Query: 115 --DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + + + +L+ T +T G+ LAK+A K Q G+ L + Sbjct: 127 ALGAKEMAKMMMDEILKTTGVTATCGMGTNLYLAKIALDILAKHQ--DDGIAYLDEELYK 184 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 ++L + P+ D W IG++ KL+ GI + D+A+ + K F V T+ G Sbjct: 185 KQLWTHQPLSDFWRIGKQTRLKLEKCGIFCMKDIANAPKSLLEKIFGVDAYITIDHANGI 244 Query: 233 PCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 +++ + P+ + S ++ + A R A +L ++ ++ Sbjct: 245 EPTTIAEIKAYKPSTKSYFSSEILPRDYERCEAVI-VLKEMADRLALRLINKDVRASGLT 303 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 ++ + + ASV+ TPT S +++AA L + ++ G+ D Sbjct: 304 INVRFAD----KLEPQQRASVRFKTPTNISSVLMSAAEELLLNKIKNVGLIRQIGISAND 359 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + +A+ +LF+D+A + ++ ++ + K G+ ++ A + + R Sbjct: 360 VVKENLAEFSLFEDDA---KEKAVLKSLNLIKEKFGKNSILRAIDLLPEATGQDRNKK 414 >UniRef50_D1WCN2 Nucleotidyltransferase/DNA polymerase for DNA repair n=4 Tax=Lactobacillus jensenii RepID=D1WCN2_9LACO Length = 443 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 87/421 (20%), Positives = 162/421 (38%), Gaps = 18/421 (4%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNN------DGCVIARNAEAKA-LGVKMG 52 + + D +FYASCE + + + LS+ ++A + AK G+ Sbjct: 18 LIFMIDNKSFYASCECLRLGLNPMTTALAALSHQPDSDEQSSLIMAASPLAKKKYGLTNV 77 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGV 110 +R ++ + LY + S V+ + + + YSIDE+ D+T Sbjct: 78 MRARDLPPKSQREDLLLVEPHMNLYIEKSMEVLDIFRKYAAEEDIHTYSIDESMIDMTES 137 Query: 111 RNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 + D GR+I+ + ++ L GI + LAKLA K ++ + Sbjct: 138 WHLFGTDPYLVGRKIQKEIKEKLGLYTTCGIGENPLLAKLAMDIDAK--KRWSMIAFWHY 195 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 ++ + ++DVWGI + +++L +GI + +LA + ++ F ++ E+ Sbjct: 196 IDVPDTIWQIKNLEDVWGINKSTAQRLKKLGINDMNELAHCNPEKLKSEFGIIGEQLFAI 255 Query: 229 LRGEPCLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 G + + P ++ S+ + I A + A ++R Sbjct: 256 SWGVDRSIIRYKYKPKRKSFGNSQILMRDYLGQREIEIVIREIAEQVAARIRKHKLLTSC 315 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 IS I S N+ G +AS K+ T D+ + W G + + Sbjct: 316 ISLHIGFSKLKNNKR-NGINASKKITA-TNDNIALTTELRSLFRKYWN-GEAVRTISISY 372 Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 D QL+LF D A + + V+D+L K G +L A + ++RA L Sbjct: 373 SDLLPDIEQQLDLFSDPAKQIKRKNFDYVIDSLREKYGPTSLVKASSLLPGATAIRRANL 432 Query: 408 S 408 Sbjct: 433 V 433 >UniRef50_C9AAQ9 DNA directed DNA polymerase n=4 Tax=Enterococcus RepID=C9AAQ9_ENTCA Length = 464 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 94/427 (22%), Positives = 167/427 (39%), Gaps = 30/427 (7%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNND----GCVIARNAEAKA-LGVKMGDPW 55 DV +FYAS E + R D +VV+S++D G V+A + +AK+ LG+ Sbjct: 14 ILFIDVKSFYASVECISRGLDPIQAMLVVMSHSDNTGNGLVLAASPKAKSVLGISN---V 70 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNC 113 + +L + S Y + +V + + + +YSIDE DLT + Sbjct: 71 TRNDNLPTHPDLYKASPRMSFYIKENTKVNNVFRKYVGQDDLLLYSIDETMMDLTRTLDL 130 Query: 114 RDL----------TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV 163 ++I+ + + T L V +GI LAKLA K R + Sbjct: 131 FIPDKTISREEKRWLIAQQIQKDIYETTKLYVTIGIGDNPLLAKLALDNESKHNRSL--I 188 Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 + + + K+ P+ + WGIGRR K+L MGI+T+ LA +R ++ E Sbjct: 189 AEWTYDDVPTKVWQIAPMTEFWGIGRRTEKRLHLMGIETIEQLAHASPDLLRSRMGIIGE 248 Query: 224 RTVRELRGEPCLQLEEFAPT--KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 + G L E P ++ S+ + I A + A ++R Sbjct: 249 QLYHHAHGIDRTILSEPTPQVMEKSYGNSQVLHRNYYLQEEIEIVIKEMAEQVAARIRRH 308 Query: 282 HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQ 341 H I+ +I + G S +K+ PT ++R ++ + G + Sbjct: 309 HCQTACINVYIGVAFGETAS---GFSRQMKIP-PTDNTRKLVAHCLFLFRKFY-TGQVVR 363 Query: 342 KAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 G+ QL+LF+ + +L ++D + K G ++ A ++ Sbjct: 364 HIGITYSKLVYTENVQLDLFEQAEAQLRQRKLDLIIDKIREKYGFTSIVHATSRMEGARA 423 Query: 402 MKRAMLS 408 + R+ L Sbjct: 424 IARSKLV 430 >UniRef50_A9A3A9 DNA polymerase IV n=6 Tax=Thaumarchaeota RepID=DPO4_NITMS Length = 364 Score = 233 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 70/368 (19%), Positives = 144/368 (39%), Gaps = 23/368 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL-----SNNDGCVIARNAEAKALGVKMGDPW 55 + D + FYA CE + P+L KPV V + G + N A+ G K G P Sbjct: 5 IVFHIDFDYFYAQCEEIRSPELKSKPVCVCVFSDRGGDSGAIATANYTARKYGAKSGIPI 64 Query: 56 FKQKDLFRR-CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-- 112 K V +++ Y++MS + M +EE S E DEA+ D+T Sbjct: 65 VFAKKRLEERKDAVFLPVDFDYYSEMSEKAMKIMEEFSDVFEYVGRDEAYLDVTKRTEGD 124 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + ++I+ ++ ++T L+ +GI+ K ++K+A+ K + + + E+ Sbjct: 125 FHKASHLAQQIKNSIREKTKLSCSIGISPNKLISKIASDFQKPDG------LTIVSPEKV 178 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRG 231 + +L + D+ GIG++ ++ M ++T+ D+ D+ + K F +RG Sbjct: 179 EGFLESLKIRDIPGIGKKTEQRFTEMNLETIGDVKRLDVFTLNKEFGRKSGTYIYNAVRG 238 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 ++E + + + DY + + E ++ ++Q + + Sbjct: 239 IDDELVKE-REPSIQHGKIVTLKKDSKDYEFLLENTLELCKEVHEIIQKKNQMFKSVGIS 297 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA-IWQAGHRYQKAGVMLGDF 350 S + + S L PT ++ + L + ++ GV + + Sbjct: 298 FVQSDLSNK------TKSKMLRNPTMSLEELEKTVEQLLREALENQTATIRRLGVKVSEL 351 Query: 351 FSQGVAQL 358 + Sbjct: 352 SESQGQRD 359 >UniRef50_C3WGR0 DNA polymerase IV n=6 Tax=Fusobacterium RepID=C3WGR0_9FUSO Length = 352 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 70/348 (20%), Positives = 139/348 (39%), Gaps = 19/348 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFYAS E P L KP+VV N V + EA+ G+ K Sbjct: 4 IIMHYDMDAFYASIEINRNPKLKNKPLVVGEN---IVTTASYEARKYGIHSAMKVSDAKL 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ + + Y +SN + + + +++ +VE + DE + DLTG+ + F Sbjct: 61 LCP--KLIAIPVDKKEYIRISNEIHNLILKITNKVEFIATDEGYIDLTGIVKPENKKQFA 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + + + T+LT VGI K AK+A+ K + N + + +S Sbjct: 119 LKFKERIKELTNLTCSVGIGFNKLSAKIASDINKPFGIYIFE-----NEKDFVEYISDKK 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEE 239 + + G+G++ + L I V D+ + ++ K + E +RG ++ E Sbjct: 174 IKIIPGVGKKFFEILKHDKIFLVKDVFKYSLDYLVKKYGKSRGENLYCSVRGINHDEV-E 232 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I ++ + + + S ++L + + + ++ I+ S F Sbjct: 233 YEREIHSIGNEETYSIPLQTNSELEREFNSLFEYTYQRLLKNNVFSQSVTVKIRYSSFK- 291 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + S KL T+D + N L++ + G+ Sbjct: 292 -----TYTKSKKLKFATKDKDFLYNEMLELLNSFELED-EIRLLGIYF 333 >UniRef50_A2DLM9 ImpB/MucB/SamB family protein n=1 Tax=Trichomonas vaginalis RepID=A2DLM9_TRIVA Length = 592 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 85/375 (22%), Positives = 141/375 (37%), Gaps = 19/375 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D+++F+ASCE + P L G V G + + EA+ GV+ G F Sbjct: 88 YLHADLDSFFASCEALRDPSLVGTAFAVGGEIKHGVLSTTSYEARKFGVRSGMAVFIALQ 147 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTD 118 L +V S+YELY S+ V E+ + +DEA DL+ D Sbjct: 148 LCPHLKIV--ESHYELYKHYSSIVRKIFEKYDSHYISFGLDEASLDLSEHVKLDYEKAMD 205 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I+ V ++T LT+ GIA T LAK+A+ K + E +S Sbjct: 206 IAKNIQKEVFEQTKLTISCGIAITPQLAKIASDVNKPNGIFEIK----HDRESTLDFISK 261 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ + GIG + L +GI T+ D+ D + + G Q Sbjct: 262 LPIRKIPGIGGVAEQLLHGIGITTMKDVMDKKTDLWICMRPLFCQFIFSACLGI-NRQTF 320 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 +Q I R+F D M + I + L+ + CR ++ K S F Sbjct: 321 GVTRHQQSISKERTFDN-TNDRVFMEEIIEKLCMEVCKLLQEMNVLCRNVTVKFKDSSFQ 379 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH-RYQKAGVMLGDFF-SQGVA 356 + + T DI A + L+ ++ + +Y+ GV G + Sbjct: 380 ------TITRCLSFDHDTNKIFDIFCACVKILNDELRSRYVKYRLLGVRCGQLSTPRAKR 433 Query: 357 QLNLFDDNAPRPGSE 371 Q+++ + Sbjct: 434 QISIQTMFKKCEKKQ 448 >UniRef50_A9BNM1 DNA-directed DNA polymerase n=34 Tax=Betaproteobacteria RepID=A9BNM1_DELAS Length = 437 Score = 233 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 74/404 (18%), Positives = 132/404 (32%), Gaps = 53/404 (13%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND--------------------------- 34 A D++AFYAS E + P L G PVV+ Sbjct: 30 IAHLDMDAFYASVELLRYPQLKGLPVVIGGGRRAHDEALDARYAGRLHEIPVDEFSRLKD 89 Query: 35 ----GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEE 90 G + A+ GV K L + + ++ S + Sbjct: 90 YVGRGVITTATYPARQFGVGSAMGMMKAARLCPQ--AILLPVDFAEVRRFSRMFKEIIVS 147 Query: 91 LSPRVEIYSIDEAFCDLTGVR--NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 ++P +E +DE + D T V R I+ T+ T LT +G+A K LAK+ Sbjct: 148 IAPLMEDRGVDEVYIDFTDVPGGQREGGRVLARLIQKTITDATGLTCSIGVAPNKLLAKM 207 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLAD 208 A+ K + + + ++ L + GIG + KL ++GI+T+ +LA Sbjct: 208 ASEFNKPNGIS------IVQPDDLQAVIWPLACRKINGIGPKADAKLQSLGIQTIGELAK 261 Query: 209 TDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER---ITDYPSMR 264 + + + F G + + + +F + D + Sbjct: 262 QSLPQLVQWFGRAYGNWLHGVSWGRDERPVVTHSEP-VSMSRETTFERDLHAVRDRAELS 320 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 R A+ L+ + R + ++ F + L P D+ + Sbjct: 321 AIFTDLCERLAQDLQRKGYMGRTVGIKLRYDDFK------TATRDHTLELPMADAATLRR 374 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 AA + L + R + GV +G+ + D A Sbjct: 375 AAGQCLKRV-PLAKRLRLLGVRVGNLVRTADWEATAHDPLAREQ 417 >UniRef50_C4M8P4 Deoxycytidyl transferase, putative n=2 Tax=Entamoeba RepID=C4M8P4_ENTHI Length = 708 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 66/366 (18%), Positives = 140/366 (38%), Gaps = 23/366 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQKD 60 D+++F+AS +L GKPVVV + V + N EA+ G+K G + + Sbjct: 172 IMHVDIDSFFASVTISKHTELQGKPVVVSHGGNNADVSSCNYEARKYGIKNGMWLKQAYN 231 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + ++ +++ Y ++ ++ L + +E+ S DE D++ V D+ F Sbjct: 232 LCPQ--LIVVGYDFDEYEKVALKMYEILTKYFHNIEVLSCDECIIDISSVPEPIDI--FL 287 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 +++R + + H + GI A+LA AK + +S + Sbjct: 288 QQVRIEIKETIHCGISFGIGINPLTARLAMKKAKPDGIYYLL-------SNIEEFISTIK 340 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 + ++ G G +S++ +G+ T D++ + K + + +G Q E Sbjct: 341 IAELPGFGYSLSEQCKIIGVYTCGDISLISKEVLEKQIGEKNTLKLIEMSKGIDNTQF-E 399 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS---- 295 K+ + S ++G R + ++Q I ++L + ++ I T Sbjct: 400 NKKEKKSVGISINWGIRFENDDDVKQFIFRMCCEVEKRLHKSNVMGTLMTMQIMTRKEGS 459 Query: 296 ----PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 + + S S+ + TQ+S + +A + + + + Sbjct: 460 GEAIKYKGHGIVNMQSKSITICE-TQNSAILNKSAIILWNQFQIPIKDLRGISIQISKVH 518 Query: 352 SQGVAQ 357 S Q Sbjct: 519 SIQPVQ 524 >UniRef50_C4Z6F8 DNA polymerase V n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z6F8_EUBE2 Length = 455 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 84/445 (18%), Positives = 155/445 (34%), Gaps = 41/445 (9%) Query: 1 MFALCDVNAFYASCETVFR-PDLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++ D+ +FYAS E V R D +VV + +A K G+ F Sbjct: 4 VYIAIDLKSFYASVECVERESDPLTTNLVVADESRTAKTICLAVTPSLKKYGLSGRSRLF 63 Query: 57 KQKDLFRR--------CGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCD 106 + + + + LY + S+++ S + + +YSIDE F D Sbjct: 64 EVEQKAKEIEKRTGKKLEYIVAVPRMGLYIEYSSKIYSIYLKYFSKDDITVYSIDEVFID 123 Query: 107 LTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV 164 T + ++ V T +T GIA L K+A K + V Sbjct: 124 ATDYMKLYNMTARQLTAKVIEDVYDTTGITATAGIAPNLYLCKIAMDIVAKHIQADSKGV 183 Query: 165 DLSN---LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR---FIRKHF 218 ++ + ++ L P+ D W +G IS++L+ GIKT+ D+A + ++ K F Sbjct: 184 RIAELSVNDYRKMLWGHTPLTDFWRVGPGISRQLEKHGIKTMGDIARMSLEDEDWLYKQF 243 Query: 219 NVVLERTVRELRGEPCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 V E + G ++++ P + + E + R + A A Sbjct: 244 GVDAEILIDHAWGYEPCTIADIKKYKPKASSLCSGQVLKEP-YTFEDARIVVGEMADELA 302 Query: 276 EKLRSEHQYCRFISTFIKTS---------------PFALNEPYYGNSASVKLLTPTQDSR 320 L + I+ + E G + SV L T T S+ Sbjct: 303 LDLVDKGFVTDSIALNVTYDRVNVDKGTYKGEIHVDRYGREVPQGLNKSVSLTTCTSSSK 362 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + A D +K + + + + G Q ++F D +++ M + Sbjct: 363 QLREAFLDIYDKYTDRKLYIRKLNLTVANLTNDGFQQFDMFTDQTQLEREKKMQHAMLDI 422 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRA 405 K G+ + A + ++R Sbjct: 423 KKKYGKNAVMKANNLQSKATAIERN 447 >UniRef50_Q5K8U2 Putative uncharacterized protein n=3 Tax=Agaricomycotina RepID=Q5K8U2_CRYNE Length = 658 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 75/384 (19%), Positives = 137/384 (35%), Gaps = 30/384 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E P L GK V G + + EA+ GV+ F K L Sbjct: 221 IIHVDMDAFYASVEVQRDPSLKGKAFGVG---KGVLCTASYEARKFGVRSAMAGFIAKKL 277 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDF 119 ++ +++LY S V L + + + S+DE + ++T + + ++ Sbjct: 278 CPH--IILTDLHFDLYTKASKAVKEVLVQYDENLMMASLDEGYLNITPYMSTHNMTASEV 335 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 EIRA V ++T LT+ GIA + LAK+ + K + + M L Sbjct: 336 VTEIRAQVEEKTSLTISAGIAANRMLAKICSDKNKPNGHFELAF----DRATIVRFMRDL 391 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV ++ G GR + L+ +GI+T D+ + + + R G + Sbjct: 392 PVRNIPGFGRVTERCLEGLGIQTCGDIYEKRVDLLLMDHWFGFRGLCRAYLGIADNTVAP 451 Query: 240 -FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + R+F TD + + + L + ++ KT Sbjct: 452 GRREERRSVGVERTF-RDKTDDEDIMATLIDIVEELGKDLDRLQYAGKTVTVKYKT---- 506 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + + + DI+ A L R + GV L + Sbjct: 507 ---------RAKSIPKYISSATDILPIAQELLKKE--LPLRIRLLGVRLSTLKDLTIPDK 555 Query: 359 NLFDDNAPRPG--SEQLMTVMDTL 380 + + +M ++ L Sbjct: 556 GIKGLPQRSERALLQHVMPLLQQL 579 >UniRef50_C1XR91 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Bacteria RepID=C1XR91_9DEIN Length = 396 Score = 231 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 97/400 (24%), Positives = 154/400 (38%), Gaps = 30/400 (7%) Query: 7 VNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 +NA++AS E RP+L GKPV V+ C IA + EAK GVK G + L Sbjct: 1 MNAYFASVEQQMRPELRGKPVGVVPVMAESTCCIAVSYEAKRYGVKTGTRVADARLLCPH 60 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDFGREI 123 +V + +LY + ++ ++ + P + SIDE C L GV + Sbjct: 61 IAIV--EARPQLYIQVHREILKAIDTVLPIQAVLSIDEVVCKLIGVERKPHQAIRLAEAV 118 Query: 124 RATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 + + + L VG+ K LAK+A+ K + L + + + L + Sbjct: 119 KQAIKTQVGPYLRCSVGLGPNKLLAKVASDMKKPDG------LTLLEPQTLPQALFGLRL 172 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV--LERTVRELRGEPCLQLEE 239 D GIG R+ + + GI TV +L + + + R LRGE L E Sbjct: 173 CDFPGIGPRMEARFHSFGITTVEELYQLSPHQLSRIWGSSQIGTSWWRRLRGED---LPE 229 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I SR + + + + +AA +LR E+ + I F+ Sbjct: 230 APTRRHSISHSRVLPPQERNDERAKAVLMRLVYKAAARLRHENYWTGSIRVFVAY----- 284 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 +L + I AT L G K GV+LG+ Sbjct: 285 -LGRPLWHEECRLPSCQDTLTLIR--ATDRLWKHKPLGTPL-KVGVILGNLEPDPSISWP 340 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 LF ++ +L +D N K G +LYFAG + + Sbjct: 341 LFSEDQ---KLIRLSQAIDQANRKFGAYSLYFAGMDMGKP 377 >UniRef50_C1F7T1 ImpB/MucB/SamB family protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7T1_ACIC5 Length = 441 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 101/419 (24%), Positives = 170/419 (40%), Gaps = 27/419 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+N+++AS E RP+L +P+ V+ C IA + EAKA GV+ G + + Sbjct: 24 WLFLDLNSYFASVEQQLRPELRNRPIAVVPVKAETTCAIAASYEAKAYGVRTGTQVAEAR 83 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 L G+V + +E Y D R++ +E+ P + SIDE C L G R D Sbjct: 84 RLCP--GIVFVEARHEAYVDYHKRIVEAVEQCVPVAAVCSIDEMACRLLGREQPLRHALD 141 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 RE++ ++ +R L VG+A + L+K+A+ K + + + Sbjct: 142 LAREVKGSIRRRVGETLRCSVGLAPNRYLSKVASDMDKPDG------LVALTPDILDTAL 195 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCL 235 L D+ G+G R+ K+L GI T+ +L D +R+ + V E+ LRGE Sbjct: 196 RRLVPRDLPGVGARMEKRLHEAGIHTMDELLALDRDGMRRAWGSVNGEKLWHWLRGEDFH 255 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 E + I S + +AA +LR+ + +S +K + Sbjct: 256 DAELEHN--KSISQSHVLPPELRSVEGAYAVAHKLLHKAAMRLRTARLWTTHVSLTLKFA 313 Query: 296 PFALNEPYYGNSA-------SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK---AGV 345 S + QD++ ++ A + + + G +QK GV Sbjct: 314 VPKSEAHRKHYSGIPQLGWAQGTTVIECQDNQTLVEALRKLWE-LRPTGPAHQKPFFVGV 372 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 LG+ + L+LF L T +D +N K G TL A + + R Sbjct: 373 WLGNLVPDHLHTLSLFSSLETEARRTSLTTTIDRVNLKYGLDTLAPASMLLAKAAAPTR 431 >UniRef50_A4S3F0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S3F0_OSTLU Length = 618 Score = 230 bits (586), Expect = 8e-59, Method: Composition-based stats. Identities = 72/377 (19%), Positives = 128/377 (33%), Gaps = 28/377 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWG-KPVVVLSN----NDGCVIARNAEAKALGVKMGDPWF 56 D++ F+AS RP+L P+ V G V + N A+A GVK G Sbjct: 59 IFHVDMDCFFASVAMRARPELSTETPLAVSWGTSASKRGEVSSANYAARAFGVKAGMWLD 118 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEI-YSIDEAFCDLTGVRNCRD 115 + L +V ++ Y ++ V L E S + S DEAF D+T D Sbjct: 119 EALRLCPE--LVLAPYDFAEYEKVALEVYEILFEASRGECVGISCDEAFIDVTSRCESED 176 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 +IR V +T +GI LA+LA AK + +R+ Sbjct: 177 AVAVAEQIRRDVYAKTKCACSIGIGSNMLLARLATRRAKPDGAFR------VEPKDEREF 230 Query: 176 MSALPVDDVWGIGRRISKKLDA-MGIK---TVLDLADTDIRFIRKHFNVV-LERTVRELR 230 ++ + D+ G GR +KL I+ T L + ++ E+ + R Sbjct: 231 IAKTRLADLPGFGRHAGEKLQKSTKIRVTDTCETLLKVPVATLKSALGAQKTEKLLEAAR 290 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G P ++ I S+G R + A +++ R ++ Sbjct: 291 GIDKTPW-CVRPQRKSIGAQMSWGVRCASNEVAMDYVKQLVREVAYRMQRLKIRGRALNL 349 Query: 291 FIKTS--------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 + + + + + + + + D+ II+ A L + + Sbjct: 350 KLWRAIPDVNTMRDYQGHGACDVLTRTKAMRELSNDTELIISEALTILRELNVEATSIRG 409 Query: 343 AGVMLGDFFSQGVAQLN 359 GV + + Sbjct: 410 LGVSITKLEHGAETATS 426 >UniRef50_C4FT17 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=C4FT17_9FIRM Length = 423 Score = 230 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 91/415 (21%), Positives = 150/415 (36%), Gaps = 18/415 (4%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAK-ALGVKMGDPWF 56 D +F+AS E V R D + V+S G V+A + K G+ G + Sbjct: 14 ILCIDCKSFFASIECVERGLDPLTAKLCVVSRPHLKGGLVLASSPRMKSEYGIGTGSRVY 73 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCR 114 R +V + LY ++ + + + +YSIDEAF D+ Sbjct: 74 DLPK--RDSDIVLAPARMNLYVQRNHDINQIFLQYVAWEDLHVYSIDEAFLDVGRSHALF 131 Query: 115 DL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 +I+ + +R L VGI LAKL K++ S Sbjct: 132 GSNYQIAWQIQHEIYKRYGLPTCVGIGDNLLLAKLCLDNVAKYRSPYL--AYWSYARIPE 189 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + + D WGIGRR L++MGI +V DLA D+ ++ F V G Sbjct: 190 TVWKIEKLSDFWGIGRRTQTSLESMGIYSVKDLAHADLGKLKARFGVKGAELYYHANGLD 249 Query: 234 CLQLEE-FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + E ++P Q S+ DY + + A A +LR E + + I Sbjct: 250 ASVIREAYSPQSQVYSASQILERNYLDYRQVALVVREMADNLASRLRREGRMTSCLGLGI 309 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 + S T S+ ++ + L + + + + + Sbjct: 310 GY----GKDIVPKRSGGQMTFELTSSSKQLMAHSQTLLKRHYFR-LPVKSLHLTVSHLQA 364 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 G QL+LF D E+ V+D + + G G+L A + ++RA L Sbjct: 365 AGSIQLSLFQDPEQSAQEERAERVVDAVRERYGYGSLVRASSLLPGATAIQRADL 419 >UniRef50_C1DYT2 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1DYT2_9CHLO Length = 306 Score = 230 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 70/312 (22%), Positives = 127/312 (40%), Gaps = 29/312 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQ 58 + D++ F+AS + RP+L G PV V ++ G + + N A+ G + G + Sbjct: 4 VILHVDMDCFFASVAALGRPELAGLPVAVSWSSAGGGELSSCNYLARNAGCRAGMRIARA 63 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--L 116 K+L ++ +E Y+ ++ V TL ELSP V S+DEA+ D+TG+ C Sbjct: 64 KELCP--NLIVMPYEFERYSAVAIDVYRTLHELSPHVMGVSVDEAYVDVTGLAACGRKTP 121 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + ++RA + +T VG + +A+LA AK + Sbjct: 122 REIAEDVRAKIFAKTGCVASVGSGPNRLIARLATKRAKPDGSHH------VPASNASSFL 175 Query: 177 SALPVDDVWGIGRRISKKLDAMGIK---------------TVLDLADTDIRFIRKHFN-V 220 +++PV ++ G+GR +KL GI T D+A + +R+ Sbjct: 176 ASMPVAELPGVGRGTLEKLRREGIGSMVGAVGPMGTAGNPTCADVAAAPLSVLRRALGPK 235 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG E P ++ + ++G R + + A +E++R Sbjct: 236 AGAQLRDASRGIDARAW-EARPPRKSVGAQVTWGVRFEEAAEAVAFVEKLCAEVSERMRR 294 Query: 281 EHQYCRFISTFI 292 R ++ I Sbjct: 295 LRVKGRTLTLKI 306 >UniRef50_C8WH43 UMUC domain protein DNA-repair protein n=3 Tax=Bacteria RepID=C8WH43_EGGLE Length = 443 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 73/437 (16%), Positives = 140/437 (32%), Gaps = 39/437 (8%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E V R D +VV + +A KALG+ F+ Sbjct: 5 YVCIDLKSFYASVECVDRGLDPLTANLVVADPDRTEKTICLAITPSMKALGLSSRCRVFE 64 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCR- 114 + V + Y + S + S V YSIDE F D T + Sbjct: 65 ---IPENVDYVMAKPRMQRYMEASADIYSIYLRFVSPEDVHPYSIDECFIDATPYLSLYR 121 Query: 115 -DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 +F + VL T + G+ LAK+A K R G L E +R Sbjct: 122 TSAREFAVMLMEAVLAETGVRATAGVGPNLFLAKVALDITAKHARDCIG--FLDQAEFER 179 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + + P+ D+W IG I+++L + + + + + + F V E + G Sbjct: 180 TIQTHRPITDIWNIGPGIARRLAKYAVYDLRGVCEMSEATLYREFGVNAEYLIDHAHGVE 239 Query: 234 CL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + P+ + + + R + + L + IS Sbjct: 240 PCTIADIHAYEPSGHSLGNGQVLPCD-YSFEEARDVLREMVDQLVLDLVEKRLVAGSISL 298 Query: 291 FIKTSPF----------------------ALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 ++ + + + ++ + T ++ Sbjct: 299 YVGYAKGPGERAGESDGAFFDGGHGRRPASGRRGFSHTGSTRRQADRTNLYSKLMPRFLD 358 Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 D + ++ V +G + A ++LF D +L + + + G+ Sbjct: 359 LFDETTRKDAPIRRINVGVGGVLPEEFATMDLFSDVEAEAEEHRLQQAVLAVKGRFGKNA 418 Query: 389 LYFAGQGIQQQWQMKRA 405 L ++ +R Sbjct: 419 LLRGTSLKEKATARERN 435 >UniRef50_A6C5Y5 UMUC-like DNA-repair protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C5Y5_9PLAN Length = 405 Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats. Identities = 109/398 (27%), Positives = 163/398 (40%), Gaps = 22/398 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D + FY SCE + L G P VL N CVIA++ E KA GVK G P ++ K Sbjct: 5 LIGHIDSDCFYVSCERIRSYSLRGVPCGVLGNQGACVIAKSYELKAYGVKTGHPIWEAKK 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTD 118 L V ++ Y +S R++ L+ +SP VE YSIDE F D + ++ L Sbjct: 65 LCPH--AVFVKRDFRWYEVISRRLLDLLKTVSPLVEYYSIDEMFFDASELQRYFRLPLEA 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R ++ V + + V +GIA +++LAKL + AAK + Q + + + Sbjct: 123 ATRALQTLVQEEIGVPVSIGIAPSRSLAKLGSDAAKPFGIQVI-------ERDCERFLRS 175 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 PV ++ GIG R +KL I T D D IR + E ELRG+ ++ Sbjct: 176 QPVGELCGIGSRSERKLRDRNIHTCWDYRQADRLLIRNLLTIKGEALWWELRGDAVNPIQ 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 P + I S G + D +R R E L Y R IS I Sbjct: 236 TTRPPHKAIARGGSCGGKTMDADRIRAWAVRNIERLIEALDHHRVYARHISLQI-----D 290 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 N+ + L P+ R I +A L H ++ + + Q Sbjct: 291 ANKTALWLGRT-PLAVPSASFRMIYDAVMPMLAT-APTTHPVSHMHIIAENLTWRDRIQK 348 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 +LF ++A P L + +N K GR + A Sbjct: 349 SLFFEDAQSP----LDQIKRDINQKLGRFAIRSAETLP 382 >UniRef50_A5EBX2 DNA polymerase IV (Pol IV 3) n=2 Tax=Bradyrhizobiaceae RepID=A5EBX2_BRASB Length = 330 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 73/360 (20%), Positives = 122/360 (33%), Gaps = 62/360 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P L GKPV V + G V A + EA+A GV+ K Sbjct: 28 IIHIDMDAFYASVEQRDNPGLRGKPVAVGGSKERGVVAAASYEARAFGVRSAMRSVTAKR 87 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + V TD Sbjct: 88 NMQDIPV------------------------------------------------ATDIA 99 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 IRA +L+ T LT GI+ K LAKLA+ K + + + + LP Sbjct: 100 TAIRAKILRETGLTASAGISYNKFLAKLASDHRKPNGQF------VITPKMGPAFVEQLP 153 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V GIG + K++ +GI T +D+ + F+ HF RG + Sbjct: 154 VGKFHGIGPATNAKMNRLGIFTGMDMRNQTRGFMNAHFGKAGAYYYWVSRGVDERPV-RA 212 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 ++ + +F +T + ++ + + S + R ++ +K S F + Sbjct: 213 NRIRKSVGAENTFSGDLTGFAALVAELEPLIDKVWGHCESTGNFGRTVTLKVKFSDFQI- 271 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 + S + +P +D+ L+ + GV L ++ + L Sbjct: 272 -----ITRSRSVASPISSRQDLNRLTLGLLECEMPIPKSVRLLGVSLSSLQAEAEGEPQL 326 >UniRef50_D1BPP8 UMUC domain protein DNA-repair protein n=3 Tax=Veillonella RepID=D1BPP8_VEIPT Length = 427 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 84/423 (19%), Positives = 143/423 (33%), Gaps = 25/423 (5%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++ D+ FYAS E D + P+VV + G +A + K LGVK F Sbjct: 9 LYMCIDLKCFYASVECADLGLDPFTTPLVVADGSRGKGAITLAISPALKKLGVKNRSRLF 68 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR 114 + + + + + Y +S + TL + V +YSIDE F D+T Sbjct: 69 Q---IPPHIEYLTVKPHMKRYMQVSAEIYGTLLKYVAPEDVHVYSIDEYFIDITPYLPLY 125 Query: 115 --DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + + VL T + VGI LAK+A K G +D S + Sbjct: 126 KKTPRQLAQMLLDAVLVATKIYATVGIGTNLFLAKIALDILAKHASDFIGYLDESLFKE- 184 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 + P+ D+W IG+ I+ +L G + + + K F + E + G Sbjct: 185 -TIWYHQPLTDIWQIGKGIANRLHKYGAYDLHGITMIPEAKLYKEFGINAELIIDHAWGR 243 Query: 233 PCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 + + P K I S+ Y + +L I Sbjct: 244 EPCTIADIHAYRPIKHSISHSQILLRN-YTYEEACVPMREMVESLVLELLQIKGVTNHIY 302 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 I + NE S KL T + + A + + ++ GV D Sbjct: 303 VHIGYA----NEMMRSTGGSKKLKQYTDSLQTLTTAVIKLYEQHCHKNELIRRIGVSFED 358 Query: 350 FF--SQGVAQLNLFD--DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 S + +LF+ Q+ M ++ + G+ ++ A ++ R Sbjct: 359 LVNRSAIPQEEDLFNILATDTEEKERQVQEAMLSIKEQFGKNSILRASSLQEEGTMRFRN 418 Query: 406 MLS 408 L Sbjct: 419 TLV 421 >UniRef50_B5BUV5 DNA polymerase kappa n=2 Tax=Agaricales RepID=B5BUV5_COPCI Length = 707 Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats. Identities = 74/341 (21%), Positives = 137/341 (40%), Gaps = 29/341 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E + P L GKP V G + + EA+ GV+ G F K L Sbjct: 106 IVHVDMDAFYANVEILRDPSLKGKPFAVG---RGVMSTASYEARKYGVRSGMAGFIGKKL 162 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DF 119 + ++ ++++LY+ S ++MS P + +DEA+ ++T T + Sbjct: 163 CPQ--LIFVPAHFDLYSKTSAQIMSIFRRYDPTMCPAGVDEAYLNVTAYCKQHGKTVDEV 220 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 E+R V T LTV GIA K LAK+ + K + + + M +L Sbjct: 221 VSEMRKAVFDETQLTVSAGIAPNKMLAKICSDKNKPNGQFKLEF----EPDSIKAFMHSL 276 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTD--IRFIRKHFNVVLERTVRELRGEPCLQL 237 + V G+GR + LD++GI+T D+ I + K F L+ +R G + Sbjct: 277 SIRKVPGVGRVNERLLDSIGIRTCGDIYQQRGVIALMDKRFG--LDFLLRVYLGIASNHV 334 Query: 238 EEF-APTKQEIICSRSFGERITDYPSMRQAICSYAAR-------AAEKLRSEHQYCRFIS 289 ++ I R+F +++ ++ + A+ E ++ E + ++ Sbjct: 335 APHAREERKSIGAERTFSTLDSNHADPKKGSVAIVAKLEEVAEELVEDMKREGWVGKTVT 394 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 K + + + + ++ N L Sbjct: 395 LKYKLDTYQ------TFTRAKQFSKWITTKEELFNTGKELL 429 >UniRef50_A8VWB3 DNA-directed DNA polymerase n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VWB3_9BACI Length = 421 Score = 228 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 86/416 (20%), Positives = 146/416 (35%), Gaps = 21/416 (5%) Query: 3 ALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEA-KALGVKMGDPWFK 57 D+ +FYAS D V V+ D V+A + E + +K G+ F+ Sbjct: 12 FCIDMKSFYASIACRKHGLDPLKACVAVVGAEDFDGSIVLAASPEMKRRFQIKTGNRRFE 71 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVR-NCR 114 + + + + Y D+S + + L + +YS+DE F T V + Sbjct: 72 ---IPKHPDIRIIDAEMMNYLDVSVAITALLRRYFAPKDIFVYSVDEVFISFTPVHRHWH 128 Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + I+ +++ T + +GI L+KL + K G E + Sbjct: 129 SPEEAACYIQRKIMRETGVPSVIGIGDNMLLSKLCLDLSAKKTSSGIGRW---RYEDVEE 185 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEP 233 + D+WGIG R K+L MG++TV D++ + + F + G Sbjct: 186 KLWPHAARDMWGIGSRTGKRLRHMGVRTVGDISRAGEERLIREFGPAIGSQLYWHSLGVD 245 Query: 234 CLQLEEFAPTKQ-EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 +L AP I + Y ++ I + + R R + + Sbjct: 246 LTRLAPEAPKGDISISNGQILMRD-YSYEDVKVIILEMSEEVGRRTRQTGLMGRTVGLSV 304 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 E G + SV L + T + + AA LD ++ V LG+ Sbjct: 305 GY----GRETGGGFNRSVSLPSATNATTVLYRAALDLLDRHMLCDLPARQVTVSLGNLEP 360 Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 QL L D+ QL +MD + K G L A + R L+ Sbjct: 361 DRYVQLTLLDEERISEKERQLGYIMDCIREKHGSNALLRAVSLTEAGTARHRNELT 416 >UniRef50_Q4Q8C4 DNA polymerase kappa, putative (Dna polymerase iv, putative) n=3 Tax=Leishmania RepID=Q4Q8C4_LEIMA Length = 598 Score = 228 bits (580), Expect = 4e-58, Method: Composition-based stats. Identities = 75/362 (20%), Positives = 125/362 (34%), Gaps = 16/362 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ E P L GKP V S + N A+ GV+ G P F K L Sbjct: 145 YIHIDMDMFYAAVEEKKTPSLRGKPFGVGSQQ--MLSTTNYIARQYGVRSGMPGFIGKKL 202 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR---DLTD 118 ++ +++ Y + RV S + +DE D+T +D Sbjct: 203 CPE--LIIVPNDFPAYQREAARVHSIASRYDAQFVSVGLDELTMDVTKYLQEFPAVSASD 260 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + R V +T LT GI T LAK+A++ K + L E + Sbjct: 261 IAHDFRDEVFLKTQLTSSGGIGPTSILAKIASNVNKPNGQHEI---TLLTREEVINYVRD 317 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 +P+ + GIG L A+ I T L + L + G Sbjct: 318 IPLRKIPGIGYAQEMTLGALHIHTCGGLLEHKYLLAYLFREKTLAHYLSVGLGLAETFSL 377 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 +Q + SF E + + + + + +H R ++ +K + Sbjct: 378 RKHQARQSVGKETSFSEPLPSPEAFTRLFRKLLEQCHVRCVRDHLQPRKMTLVLKYRTYD 437 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + SV L + T D + + A+ + L+ + GV L F Sbjct: 438 TEQF------SVTLPSHTNDLKVWLEASQKLLEPHLLHYAELRLIGVRLQRFTDIDDDHA 491 Query: 359 NL 360 L Sbjct: 492 GL 493 >UniRef50_P63988 DNA polymerase IV 2 n=20 Tax=Corynebacterineae RepID=DPO42_MYCBO Length = 346 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 86/351 (24%), Positives = 141/351 (40%), Gaps = 21/351 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-----NDGCVIARNAEAKALGVKMGDPWF 56 D++ F AS E + P+L G PV+V N V + EA+A GV+ G P Sbjct: 9 ILHVDLDQFLASVELLRHPELAGLPVIVGGNGDPTEPRKVVTCASYEARAYGVRAGMPLR 68 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 SN Y S V++ L +L VE++ DEA+ + D Sbjct: 69 TAARRCPEAT--FLPSNPAAYNAASEEVVALLRDLGYPVEVWGWDEAYLAVAPGTPD-DP 125 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + EIR +L +T L+ +GI+ K AK+A AK +M Sbjct: 126 IEVAEEIRKVILSQTGLSCSIGISDNKQRAKIATGLAKPAGIYQ------LTDANWMAIM 179 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 V+ +WG+G + +K+L +GI TV LA TD + F + +G + Sbjct: 180 GDRTVEALWGVGPKTTKRLAKLGINTVYQLAHTDSGLLMSTFGPRTALWLLLAKGGGDTE 239 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + A + + +F +T M A+ A R ++ + + ++ ++T+ Sbjct: 240 VSAQAWVPRSRSHAVTFPRDLTCRSEMESAVTELAQRTLNEVVASSRTVTRVAVTVRTAT 299 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 F Y + KL P+ D I AA LD +++ + GV L Sbjct: 300 F------YTRTKIRKLQAPSTDPDVITAAARHVLD-LFELDRPVRLLGVRL 343 >UniRef50_B6HNR2 Pc21g13870 protein n=17 Tax=Leotiomyceta RepID=B6HNR2_PENCW Length = 611 Score = 227 bits (578), Expect = 7e-58, Method: Composition-based stats. Identities = 80/371 (21%), Positives = 146/371 (39%), Gaps = 21/371 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+A+ E + RP+L P+ V G + N A+ GV+ G F K L Sbjct: 114 VIHVDCDAFFAAVEELDRPELKRVPMAVG---KGVLTTCNYLARKFGVRSGMASFVAKKL 170 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DF 119 + +V NYE Y + + + + E P E SIDEA+ ++T N L + Sbjct: 171 CPQ--LVLLPQNYEKYTAKAKEIRAIMAEYDPLFESASIDEAYLNITAYCNENHLEPDEV 228 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R +RA +L+ T ++V GIA +AK+A++ K + + + + M L Sbjct: 229 VRRMRAEILETTKVSVSAGIAANAKIAKIASNINKPNGQFQVPN----DRDAIMEFMRDL 284 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 V V GIGR ++L+++G+K D+ + + + G ++E Sbjct: 285 SVRKVNGIGRVFERELESIGVKKCGDIFPHRALLTKLFGEKAFQFLAQCYLGLGRTKMEP 344 Query: 240 FAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F E I D +R + A + L R + +K F Sbjct: 345 VETHERKSVSTETTFHE-IGDKEELRAKLWWAAQELEKDLARTQFKGRTLVLKVKLHTFE 403 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVA 356 + + ++D+ + A L + + + + G+ + S Sbjct: 404 V------LTRQTAPPRAVSLAKDLYSFALPMLAKLERDIPDMKLRLLGLRCSNLVSTQKV 457 Query: 357 QLNLFDDNAPR 367 +N F A Sbjct: 458 GINFFGVAAQP 468 >UniRef50_B0UY97 Novel protein similar to vertebrate REV1 homolog (S. cerevisiae) (REV1) n=3 Tax=Danio rerio RepID=B0UY97_DANRE Length = 1268 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 59/327 (18%), Positives = 121/327 (37%), Gaps = 21/327 (6%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + + + EA+ GV+ G + + K L + ++ Y +++ + L + +E Sbjct: 547 IASCSYEARQAGVRNGMFFGRAKQLCPD--LQSVPYDFHAYKEVALAMYEILASYTHNIE 604 Query: 97 IYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DEA D T + + R IR + ++T VG++ LA++A AK Sbjct: 605 ALSCDEALVDATALLVELGVSPDELARSIREDIKEKTGCCASVGMSSNILLARMATRKAK 664 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + L E + PV + G+GR +S KL ++G+ T DL + + Sbjct: 665 PKGQY------LLRSEEVDDFIRDQPVSSLPGVGRSMSSKLTSLGVSTCGDLQQLSLSQL 718 Query: 215 RKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 ++ F + R RG + ++ + ++ R T + + + Sbjct: 719 QREFGPRTGQTLFRFCRGLDDRPVRSEK-ERKSVSAEMNYNIRFTQVEEAESFLNNLSME 777 Query: 274 AAEKLRSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 ++L R ++ + + + + + SV L PT R I + Sbjct: 778 VQKRLEGAGLRGRRVTLKVMMRKPGAPVEPAKYGGHGICDNFARSVLLAQPTDSGRVIAS 837 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFF 351 A + A+ + G+ + Sbjct: 838 EAIKLFHAMKLNVKDMRGVGLQVQQLD 864 >UniRef50_A6Q1N4 DNA polymerase IV n=1 Tax=Nitratiruptor sp. SB155-2 RepID=A6Q1N4_NITSB Length = 418 Score = 226 bits (577), Expect = 9e-58, Method: Composition-based stats. Identities = 77/442 (17%), Positives = 141/442 (31%), Gaps = 70/442 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 M D++AF+ S E + +P L P V Sbjct: 1 MKIHIDIDAFFISAERLKKPSLRNIPAAVGGRGDPFIFDSKNQHKMDLLQKHQGAFVPSI 60 Query: 34 ------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 G +I + EA+ GVK G + L VV N+ Sbjct: 61 FYDADMEFDEYFKDGGKIRGIIITSSYEARRYGVKTGMSVKEALQLCPHLKVV--PPNHL 118 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTV 135 Y +S + + L++ P VE +SIDE F DL G F ++ + + L V Sbjct: 119 YYHKLSKALHNLLQKEIPVVEQFSIDEFFGDLDGYIEDEYTETFIHHLQILIKDKLGLPV 178 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +G A++K AKLA AK + E + +P++ GIGR K+L Sbjct: 179 SIGAAKSKWTAKLATSYAKPHGIKVV--------EDVEGFIQNIPLEKFPGIGRGYFKRL 230 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 GI+T+ + + I + + + GE L ++ + SR+ Sbjct: 231 KRYGIQTLGETKYI--KDIFYSWKKPGITLYKRIWGEDNESLHPKI-PRKSVGISRTI-N 286 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 I+D +++ + A ++ + E +K S + + Sbjct: 287 PISDRKELKRRVIVLARHLSDSVAKERFNPTQYFLSLKYDTGYK-------SKAHIIDET 339 Query: 316 TQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 T A + + + + F + + +L+ Sbjct: 340 TFSEAKCKRIALELFEQADKYPTASVTRIALRCLRFKKFSSYE---LLNWKKDKKFTKLL 396 Query: 375 TVMDTLNAKEGRGTLYFAGQGI 396 + K G + + + + Sbjct: 397 QQSRKVRQKYGMDLIKWGVELM 418 >UniRef50_Q041Q9 Nucleotidyltransferase/DNA polymerase for DNA repair n=13 Tax=Lactobacillus RepID=Q041Q9_LACGA Length = 439 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 82/423 (19%), Positives = 162/423 (38%), Gaps = 19/423 (4%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLS------NNDGCVIARNAEAKA-LGVKMG 52 + + D +F+ASCE + + + V+S G ++A + AK G+ Sbjct: 11 LIFMIDNKSFFASCEALRLGLNPMETCLAVVSRQPDSCWGSGLIMAASPLAKKKYGLHNV 70 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGV 110 + ++ + + LY S +V+ + + + +YSIDE D+T Sbjct: 71 MRVRQLPPKWKAPDLKLVEPHMNLYIKRSVQVLDIFRKYAANEDIHMYSIDEGMIDMTDS 130 Query: 111 RNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 R+I+ + L GI + LAKLA + K ++ Sbjct: 131 WKLFGNGPYYVARKIQKDIHDALGLYTTCGIGENPLLAKLAMDNSAKHKKSML--AFWHY 188 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 L+ + ++DVWGI R + +L +GI + DLA + ++K F ++ E+ + E Sbjct: 189 LDVPDTIWKIEKLEDVWGINTRTANRLRKIGINNMYDLAHSSPYLLKKEFGIIGEQLLAE 248 Query: 229 LRGEPCLQL-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 G + +++ P + S+ + + I + A ++R+ + Sbjct: 249 SWGVDRSIIRQKYHPKSKSYGNSQVLTRDYFNQREIELVIREIGEQVAARIRAHNLRAGK 308 Query: 288 ISTFIKTSPFA--LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 +S +I S F G K+ PT + D++ W + V Sbjct: 309 VSLYIGFSLFQLTETTKRGGFGVQRKIT-PTNVNHDLVKELIALFRENWHR-ESVRTISV 366 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 D G QLN+ +D + +L ++D + + G +L A ++ ++R+ Sbjct: 367 SYTDLSPDGTQQLNMLEDFDLQIKRYKLDHIVDKIRKEHGFTSLVKASSLLKGATAIERS 426 Query: 406 MLS 408 L Sbjct: 427 NLV 429 >UniRef50_D1AVL7 DNA-directed DNA polymerase n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AVL7_STRM9 Length = 421 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 75/418 (17%), Positives = 147/418 (35%), Gaps = 21/418 (5%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++A D +FYAS E R D + +VV G +A K GVK F Sbjct: 8 VYACIDFKSFYASVECAERNLDPFTTNLVVADETRGNGAVTLAITPYMKKQGVKNRCRIF 67 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR 114 + + + +LY S + + + IYSIDE F +LT Sbjct: 68 Q---IPEDIEYIKAMPRMKLYMKYSAEIYAIYLRYIAPEDIYIYSIDECFIELTPYLKLY 124 Query: 115 D--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + D I+ + + + GI LAK+A K + G++DL+ + Sbjct: 125 NMRAKDIVIMIKNAIFEEMKIPSSAGIGTNLFLAKVALDVVAKKVKDEIGMLDLNRFK-- 182 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 + + P+ D+W IG+ I+K+L+ G+ + L+ D + F + G Sbjct: 183 KYIWKHRPITDIWNIGKGIAKRLEKYGVYDLYSLSLMDEEILYNEFGENALFLIEHSHGI 242 Query: 233 PCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 +++ + + I S+ + ++ + + +L + + I Sbjct: 243 EPCTIAEIKAYKSKTKSISNSQILFDD-YNFEDAKMIMLEMLDNLVLELVAFNYTIDNIY 301 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 ++ S S S K+ T R + T + + ++ + L + Sbjct: 302 LGVRYSGIDKK----RVSGSKKIGIRTNSFRKLSKIYTEFFNEKVDKSLKIKQITLSLNN 357 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 Q +FD+ +E+ + + K G+ + ++ R L Sbjct: 358 VLEDAWIQKEIFDETHLDEKNEKAQKAILEIKEKFGKNAILKGRSINEKSTAKARNKL 415 >UniRef50_Q4P422 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P422_USTMA Length = 682 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 76/381 (19%), Positives = 142/381 (37%), Gaps = 30/381 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKA-LGVKMGDPWFKQKD 60 D++ FYA+ E P L GK V S G ++ + EA+ GV+ G F K Sbjct: 148 ILHTDIDMFYAAVELARDPSLKGKCFGVGS---GVLVTASYEARRGYGVRSGMAVFVAKA 204 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTD 118 L ++ ++ + Y S +VM+ E+ + S+DEA+ D+T + Sbjct: 205 LCPH--LIVVKNDMQSYVQASQKVMAIFEQYDENLAKASLDEAYLDITEYVEQNASSIDQ 262 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +++R V T LTV VGIA LAK+++ K + + + M Sbjct: 263 VVQQLRNQVRSHTQLTVSVGIAPNTMLAKISSDRNKPDGQFRIQP----DRKVIVDFMRN 318 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP + GIGR + L+++G+ T ++ D + + E ++ G +E Sbjct: 319 LPCRKIPGIGRVNERILESLGVTTCGEIWDKRVELWLSFDGKI-EWLIKAHLGIGNTVVE 377 Query: 239 EFAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F +D ++ + A R + L + I+ K F Sbjct: 378 PSKREERKSVGREHTFS-PTSDTKALLDLLKESAQRVEQDLARLDFKAKTITLVAKRDNF 436 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSL-DAIWQAGH-RYQKAGVMLGDFFSQGV 355 S + + ++ + + L I + G + GV + Sbjct: 437 Q------RFSRARTSTRLVHRAEELYDITSSLLMQEIEREGAISLRLIGVRVTQLV---- 486 Query: 356 AQLNLFDDNAPRPGSEQLMTV 376 +L A +L+ Sbjct: 487 ---DLRGAAAGEERLRKLLQA 504 >UniRef50_B0D0P7 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D0P7_LACBS Length = 420 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 74/326 (22%), Positives = 127/326 (38%), Gaps = 28/326 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AF+AS E ++ P+L GKP V G + + EA+ GV+ G P F K Sbjct: 106 IIVHVDMDAFFASVELLYNPELAGKPFGVG---RGVLTTASYEARKYGVRSGMPGFIAKK 162 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-- 118 L +V S+N+ Y++MS +VM P + DEA+ ++T LT Sbjct: 163 LCPDLILV--SNNFSRYSEMSAKVMDIFRRYDPNMCPAGSDEAYLNITEYSVRHGLTAEV 220 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +E+R V T LTV GIA K K + + + M Sbjct: 221 CVQEMRKAVHAITQLTVSAGIAPNK---------NKPNGQFQIPF----DSASIKAFMHH 267 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L + V GIGR + L+++GIKT D+ + L+ ++ G +E Sbjct: 268 LSIRKVPGIGRVNERLLESIGIKTCGDIYMHRVVISVMDKRFGLKFLLQTHLGIASNIVE 327 Query: 239 EF-APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ I R+F + D + Q + AA + + R ++ K + Sbjct: 328 PHLREERKSIGAERTFSS-LGDKEKILQKLQEIAAELEKDMSRNGWTGRTVTLKYKLDTY 386 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDII 323 + + + ++ Sbjct: 387 QV------FTRAKTFDRYVFTKEELY 406 >UniRef50_C5MCF2 Putative uncharacterized protein n=1 Tax=Candida tropicalis MYA-3404 RepID=C5MCF2_CANTT Length = 1121 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 67/404 (16%), Positives = 128/404 (31%), Gaps = 39/404 (9%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFK 57 + D + F+A+ + RPDL P+ V IA N A++ G+K G Sbjct: 398 VIMHIDFDCFFATASCLLRPDLDINKHPIAVTHGGRTSDIASCNYVARSFGLKNGMWLGS 457 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCRD 115 K + ++ +++ Y S+ + L + + SIDE D T N + Sbjct: 458 AKKMCP--NLITLPYDFDSYEKYSSEFYNYLLSSKYFDSIFPVSIDEVLVDATTYCNSQI 515 Query: 116 L------TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + IR V T +V VG + LAKLA AK + Sbjct: 516 GGIHTVVEELSSRIRQDVFTLTKCSVSVGASTNVLLAKLALRKAKPNGQFQLF------- 568 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT---VLDLADTDIRFIRKHFN-VVLERT 225 + + + + D+ G GR I +KL T + D+ + + + Sbjct: 569 DNVESFLQTISIRDLPGFGRGIMEKLQNHTSATNPEIKDILHLSKAALIESLGEKTGCKL 628 Query: 226 VRELRGEPCL--QLEEFAPT----KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 RG +++ P ++ + +FG R + + + ++L Sbjct: 629 YEYCRGIDETKIEIDTKNPEAMLGRKSVSVDVNFGIRFDTVEELDDFLVRLSKELYQRLV 688 Query: 280 SEHQYCRFISTFI---------KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 + +S + F + S +L PT D I N Sbjct: 689 TLGICGSSLSLRLAKRAAGAPVNPPKFLGMGYCDYVNKSSRLGVPTNDWGIIGNEVKSLY 748 Query: 331 DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 ++ + + + + + ++L Sbjct: 749 RSVNIQVSELRGVSITMAKLKDTESVKNSRQMRLPFAKAKDKLQ 792 >UniRef50_Q03AC9 Nucleotidyltransferase/DNA polymerase for DNA repair n=19 Tax=Bacilli RepID=Q03AC9_LACC3 Length = 435 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 94/418 (22%), Positives = 154/418 (36%), Gaps = 16/418 (3%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLS----NNDGCVIARNAEAKA-LGVKMGDPW 55 L D +FYAS E++ R + +VV+S N G ++A + AK G+K Sbjct: 13 VFLIDNKSFYASVESIERGLNPLRTLLVVMSEQENTNGGLILATSPMAKKIYGLKS--NV 70 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNC 113 +Q+DL ++ LY + + E + YSIDE+ DLT Sbjct: 71 SRQRDLPVDKHLIVVPPRMNLYIKKNLAINDIFREFVANEDLWPYSIDESILDLTHTWRL 130 Query: 114 RD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + I+ T+ R L VGI AK+A K G +S Sbjct: 131 FGKTPRAVAQLIQHTIRHRLGLYTTVGIGDNPLQAKIALDVYAKHDPNLIGQ--ISYQTV 188 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + DVW IG+R + L MGI T+ LA + +++ ++ + G Sbjct: 189 PDTIWQITNMTDVWSIGQRTAAHLARMGITTMKQLAHANPYALKQELGIIGTQLFALAWG 248 Query: 232 EPCLQLEEFAPTK-QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 ++ E T+ I S+ ++ + I + A +LR H+ IS Sbjct: 249 IDRTKISERVITREPSIGNSQVLPRDYSNQVEIEIVIKEIGEQVAARLRHHHKRAGEISL 308 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 I S + G K + PT D++ W G + V G Sbjct: 309 GIGFSYAESEKDGRGGFHQTKRILPTNRDGDLVATLQLIFRQNWH-GEVIRNVAVYTGRL 367 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 QLN F+ + + L +DT+ + G L +A + ++RA L Sbjct: 368 APDTGEQLNFFEPVDQQIKATNLERTLDTIRDRFGFKGLIYAKSAMHGGTAIQRASLV 425 >UniRef50_UPI00006A0370 DNA repair protein REV1 (EC 2.7.7.-) (Rev1-like terminal deoxycytidyl transferase) (Alpha integrin-binding protein 80) (AIBP80). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A0370 Length = 1225 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 69/420 (16%), Positives = 124/420 (29%), Gaps = 77/420 (18%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S RPDL GKPV V SN Sbjct: 405 IIHVDMDCFFVSVAIRNRPDLKGKPVAVTSNRGAGTTTTREGANPQLEFQYYQNRILKGK 464 Query: 37 ----------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVV 68 + + + EA+ + K R+ Sbjct: 465 ADQPTSISSDSAQQNGLDLDISHLSMAEIASCSYEARYCIKRNRSKISKIYYCCRKA--- 521 Query: 69 CFSSNYELYADMSNRVMS-TLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRA 125 S Y + +E S DEA D+TG+ + IR Sbjct: 522 -VSCGIIFYFSQIQLKKKIFFAFYTHDIEAVSCDEALADITGILTETRLTPDEASNAIRT 580 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 V ++T VGI LA++A AK + E + V+++ Sbjct: 581 EVKEKTGCAASVGIGSNILLARMATRRAKPDGQYH------LKPEEVDDFIRGQLVNNLP 634 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTK 244 G+GR I KL +G+KT DL + + ++K F + R RG + + Sbjct: 635 GVGRTIEYKLSCLGVKTCGDLQNITMAKLQKEFGPKTGQMLYRFCRGLDDRPI-RKEKER 693 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TS 295 + + ++G R T + + + +L + ++ I + Sbjct: 694 KSVSAEINYGIRFTQTSEAEAFLINLSEEIQRRLEVVGMKGKKLTLKIMVRKAGAPIEPA 753 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + + + +V L T ++ I A + + G+ + Sbjct: 754 KYGGHGICDNVARTVTLHQATASAKVIGKEAVDMFHTMKLNISDIRGVGLQMHQLVPVHG 813 >UniRef50_A3GH67 DNA repair protein n=2 Tax=Pichia stipitis RepID=A3GH67_PICST Length = 1118 Score = 225 bits (572), Expect = 4e-57, Method: Composition-based stats. Identities = 67/386 (17%), Positives = 121/386 (31%), Gaps = 44/386 (11%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + RP+L P+ V V + N A+ GVK G + Sbjct: 406 VIFHVDFDCFFATASCLNRPELDINKDPIAVTHGGKSSDVASCNYVARNFGVKNGMWVSQ 465 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCRD 115 K L ++ +Y+ Y S+ + + SIDE D + + Sbjct: 466 AKKLCP--NLIMLDYDYKRYESYSSEFYNYFLSYDIFDSIFPVSIDEVLIDASSHFAQNE 523 Query: 116 ------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + IR + + T +V VG+++ LAKLA AK + Sbjct: 524 ENLVDMVNALSTRIRDDIFKFTKCSVSVGVSRNVMLAKLALRKAKPNGQFFLY------- 576 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKL-------DAMGIKTVLDLADTDIRFIRKHFN-VV 221 E + + ++ V + GIGR I ++L M I + DL + Sbjct: 577 EGVDEFLDSISVKSLPGIGRSIQERLADVLNQPKTMDIY-IRDLKAFSKTKLISILGDKT 635 Query: 222 LERTVRELRGEPCLQL------EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + RG L E ++ + +FG R + + A Sbjct: 636 GVKLYEYARGIDDTSLVIDTSNPEALLGRKSVSVDVNFGIRFDTVSELDDFLIRIAKELY 695 Query: 276 EKLRSEHQYCRFISTFI---------KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 +L S ++ + + + + S L PT D I + Sbjct: 696 SRLISLGVCGSNLTLKLAKRAPGAAVNPAKYLGMGYCDFVNKSSHLGVPTNDWGIIGSEL 755 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFS 352 + + + L Sbjct: 756 KALYRMVNVPVKELRGISISLTKLRD 781 >UniRef50_D2RTA3 DNA-directed DNA polymerase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RTA3_9EURY Length = 443 Score = 224 bits (571), Expect = 4e-57, Method: Composition-based stats. Identities = 79/385 (20%), Positives = 144/385 (37%), Gaps = 38/385 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-----GCVIARNAEAKALGVKMGDPW 55 + D + FYASCE + P L G+PVVV + G V + EA+ GV+ Sbjct: 20 IVCHVDADCFYASCERLREPALRGEPVVVGMGYEPGETVGAVATASYEAREFGVESAQAI 79 Query: 56 FKQKDLFRRCGVV------------------CFSSNYELYADMSNRVMSTLEELSPRVEI 97 + R + + + Y +++ V L + + V Sbjct: 80 STALEHLPRRAALDPDADDHDPELTREETGFYRPVDMDYYESVASEVRDILHDCADVVRE 139 Query: 98 YSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ 157 SIDEA+ D+T F R I + + +TV VG+A T + AK+A+ K Sbjct: 140 VSIDEAYLDVTERTAWEVADGFARHITDRIRREVGVTVSVGVAPTMSAAKIASDFDKPDG 199 Query: 158 RQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKH 217 + + R+ ++ L VD + G+G +++L MG++T D+A D + + Sbjct: 200 ------LTVVRPGEVREFLAPLEVDLLHGVGPVTARELREMGLETAADVAAADPEPLVEA 253 Query: 218 FNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 F RG+ ++E + + + +++ + I + A+ A++ Sbjct: 254 FGERGRELYDRARGDDDRRVEPKGEP-KSFSRESASADPVSEPEPKYEQIETLASAVADR 312 Query: 278 LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 R E R + P+ +N + + L P D + A Sbjct: 313 ARREGALYRTVGVKAVLPPYDVN------TRARSLSGPVDDPDLVERIARDLFTEFETD- 365 Query: 338 HRYQKAGVMLGDFFSQGVAQLNLFD 362 +K GV + + Q +L Sbjct: 366 -PVRKVGVRVANLEFAAADQASLDG 389 >UniRef50_Q8REB0 DNA polymerase IV n=8 Tax=Fusobacterium RepID=DPO4_FUSNN Length = 350 Score = 224 bits (570), Expect = 7e-57, Method: Composition-based stats. Identities = 74/361 (20%), Positives = 142/361 (39%), Gaps = 19/361 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFYAS E P L KP+VV N V + EA+ + K Sbjct: 4 IIMHYDMDAFYASIEINRNPKLKNKPLVVGEN---IVTTASYEARKYDIHSAMKVSDAKL 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L ++ + Y +SN + + + +++ +VE + DE + DLT V + F Sbjct: 61 LCP--KLIVLPVDKTEYIRISNEIHNLILKITNKVEFVATDEGYIDLTDVIKPENKKAFV 118 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + + + + T+LT VGI K AK+A+ K + + K +S Sbjct: 119 IKFKQRIKELTNLTCSVGIGFNKLSAKIASDINKPFGFFIFENEE-----EFIKHISDKK 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEE 239 + + G+G++ + L I V D+ + ++ K + E +RG ++ E Sbjct: 174 IKIIPGVGKKFFEILKNDKIFYVKDIFKYPLDYLVKKYGKSRGENLYCSVRGIDFDEV-E 232 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + I +F + + + + S E+L + + + I+ ++ + F Sbjct: 233 YQREIYSIGNEETFLIPLQNNSEIIREFNSLFEYTFERLLKNNVFTQSITIKMRYTSFK- 291 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S KL T+ + N +++ + + GV GD + QL Sbjct: 292 -----TYTKSKKLKFSTRSKDFLYNEMFELINSFEKED-EVRLLGVYFGDIKKSNLVQLA 345 Query: 360 L 360 L Sbjct: 346 L 346 >UniRef50_Q8RNE6 UmuC protein (Fragment) n=6 Tax=Proteobacteria RepID=Q8RNE6_ECOLX Length = 225 Score = 223 bits (568), Expect = 9e-57, Method: Composition-based stats. Identities = 221/225 (98%), Positives = 224/225 (99%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD Sbjct: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV NCRDLTDFG Sbjct: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVHNCRDLTDFG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 REIRATVLQRTHLTVGVGIAQTKTLAKLAN+AAKKWQRQTGGVVDLSNLERQRKLMSALP Sbjct: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANYAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 VD+VWGIGRRISKKLDAMGIKTVLDLAD+DIRFIRKHFNVVLERT Sbjct: 181 VDEVWGIGRRISKKLDAMGIKTVLDLADSDIRFIRKHFNVVLERT 225 >UniRef50_Q09615 Protein ZK675.2, partially confirmed by transcript evidence n=2 Tax=Caenorhabditis RepID=Q09615_CAEEL Length = 1027 Score = 223 bits (567), Expect = 1e-56, Method: Composition-based stats. Identities = 72/406 (17%), Positives = 134/406 (33%), Gaps = 35/406 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------VIARNAEAKALGVKMGDPW 55 D++ F+ S R DL K V + + V + + A+ GVK G Sbjct: 440 VFHVDLDCFFVSVAVRNRIDLKHKEVAITHSKGTISNSMSEVASCSYAARDCGVKNGMLV 499 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR- 114 + + +E Y +S ++ L + V S DE + +++ Sbjct: 500 RDALQKCPQLTL--LPYQFEDYVQVSRKIYEILASYTLEVRAVSCDEMYINMSSFCEKYE 557 Query: 115 --DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 D T IR + ++T VGI T LA+LA AK N ++ Sbjct: 558 INDPTILAEHIRKVIREKTQCPASVGIGSTSLLARLATRHAKPDGVF------WVNAHKK 611 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAM--GIKTVLDLADTDIRFIRKHFN-VVLERTVREL 229 + +S V D+ G G + +L + I +L R + F + + +R+ Sbjct: 612 NEFISEEKVKDLPGFGYEMMNRLTSFFGDITKCRELQLKTERELVPVFGPKLASKILRQC 671 Query: 230 RGEPCLQLE-EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 RG + ++ + C ++G R T + Q + + A KL I Sbjct: 672 RGIEEDPDDFWATHVRKSVSCDINYGIRFTKRGEVIQLMTAIGAELERKLIDSKLTAGSI 731 Query: 289 STFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 + + TS F + + + L PT + + A + + Sbjct: 732 TLKLMVRSANAPIQTSKFMGHGICDTFTKTCNLNVPTTRGESLTSEAMKLYAKVSPKVED 791 Query: 340 YQKAGVMLGDF-----FSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + GV G A +F + + ++ + Sbjct: 792 LRGVGVTCGKLKSKLKKDAATAVQEMFGKTSRVGNMARTDEQLNII 837 >UniRef50_C8PJM6 DNA polymerase IV n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PJM6_9PROT Length = 385 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 81/405 (20%), Positives = 150/405 (37%), Gaps = 32/405 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-----------GCVIARNAEAKALGV 49 M A D+++F+ S + P L GK + V+ D +++ + EA+A GV Sbjct: 1 MIAHIDLDSFFVSVARLADPVLVGKKIAVVGGGDEEIFGGKSELGSVILSASYEARADGV 60 Query: 50 KMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG 109 P L + +V + + Y S + L +P +E +SIDE F +L G Sbjct: 61 HSAQPVKIALGLCPQLILV--RARHGEYRKASREIYEFLLSFTPEIEKFSIDEFFLNLRG 118 Query: 110 VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 D F +++ +++R L VG+++ K +AKLA K + + Sbjct: 119 TPYDADALGFAAFLQSEIMRRFSLPCSVGLSEAKLIAKLATSLTKPFGVRQ------ILK 172 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 + + +S++PV GIG+ K L GI + D R I + + L Sbjct: 173 SQIARELSSVPVAKFPGIGKAAQKTLGKYGIVSFGD--ALGHREIFEKMGANGRKIFAAL 230 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 GE ++ ++ I RSF D +R+ I A A ++ + Sbjct: 231 SGEDEGRVVS-KRERKSIGFGRSFA-PCADRDELRRKILILARHLAGEVLARGLKPATYD 288 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 I+ + L ++ + ++ + G + + L + Sbjct: 289 LKIRYKSREEFSHQISQDRAFSLSLLSETALELFKLCD------VKKGAQIIHVALNLSN 342 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 F + + L LF + + L + + K G L A + Sbjct: 343 FSGKSGSSL-LFCEIDK--KQQSLDRSLSRIWEKFGIEKLKKASE 384 >UniRef50_C4XEA8 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XEA8_MYCFE Length = 416 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 84/406 (20%), Positives = 167/406 (41%), Gaps = 23/406 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFKQKD 60 D ++++ S P+L GK V + V + + E K G K+G P K + Sbjct: 7 IFHMDFDSYFVSAHRSINPELKGKSVAIGRRLKRSIVSSISYELKRKGAKVGWPKNKILE 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTL-EELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 + V N++LY +SN++ + E+ + +E++SIDE + D+T + RD D Sbjct: 67 IDP--LTVFIEPNFDLYLSLSNKIFEFISEKYTKNIEVFSIDECWLDVTDIIKNRDPKDL 124 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + I++ +L + +GI+ K LAKL+ + K + + E K + L Sbjct: 125 AKSIQSDILNTFDIPATIGISYNKFLAKLSTNLGKPFGILE------TKEEDIEKRIWPL 178 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR--FIRKHFNVVLERTVRELRGEPCLQL 237 P+ + +GIG +++L M I T+ LA + I+K F V + + E +G QL Sbjct: 179 PIIEFFGIGAPTAERLIRMHIDTIGKLAKCNWENFKIQKIFGVKTKGIILEAQGNGNDQL 238 Query: 238 EEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + I +F I D + + S + +++ ++ + IS I+ Sbjct: 239 NYEHNDLKNIGNELTFLTYDIDDRKEILLILRSLCVKVSKRAKNRNTLPEVISCSIR--- 295 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + +S + + D I A++ + +W + GV L ++ Sbjct: 296 ---DTNKTWHSKQKTMSVVSNDEDIIFKEASKLFEILWNE-EPIRGIGVRLHKLVNEFDY 351 Query: 357 QLNL--FDDNAPRPGSE-QLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 L F ++ +++ +N + L A + +++ Sbjct: 352 GKQLSIFTTPEDESSQTIKIKNIINDVNYQLRDKKLKLASEYSKEK 397 >UniRef50_A5DN15 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DN15_PICGU Length = 1098 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 60/385 (15%), Positives = 126/385 (32%), Gaps = 42/385 (10%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D ++F+ + + P+L +P+ V V + N A++ G++ G+ + Sbjct: 406 VILHVDFDSFFVTASCLSHPNLDIKKQPIAVSHGTKTSDVASCNYVARSFGIRNGEWVGR 465 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRN--- 112 ++ +++ Y S + + L ++ V SIDE D T + Sbjct: 466 AMKKCPE--LIVIEYDFDAYERCSKELYNFLIDSKIFDSVFPVSIDEVLLDATTYCSNSF 523 Query: 113 -----CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + + D + IR V + T V VG + LAKLA AK + Sbjct: 524 SDSTFEQRVHDLSKMIRERVYELTSCPVSVGASYNVLLAKLALRKAKPDGQFQLF----- 578 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMG----IKTVLDLADTDIRFIRKHFN-VVL 222 + + ++ + V+D+ G+G S+KL + I T ++ + + Sbjct: 579 --DNVEQFLTDIKVNDLPGVGYSHSEKLQEIMNTSSIPTAGEVRQLSLTKLINVLGEKTG 636 Query: 223 ERTVRELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 ++ RG + E ++ + ++G R + A + Sbjct: 637 QKLYNYARGIDSTSINIDLTNKEAVLGRKSVSVDVNYGIRFDTVLQLDDFFMRLAKELYK 696 Query: 277 KLRSEHQYCRFISTFI---------KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAAT 327 +L S ++ + + S S +L PT D + + Sbjct: 697 RLISLGICGSQVTLKLAKRAAGAPVNPPKYLGMGRCDFVSKSSRLGIPTNDWGVVGSELK 756 Query: 328 RSLDAIWQAGHRYQKAGVMLGDFFS 352 + V + Sbjct: 757 SLYRMSQVPVQDLRGIAVTMTRLED 781 >UniRef50_Q1Q0T1 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q0T1_9BACT Length = 348 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 72/328 (21%), Positives = 135/328 (41%), Gaps = 29/328 (8%) Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCRD-LTDFGREIRATVLQRTH-LTVGVGIAQTKTL 145 +P +E+YS+DE F D+ G + + ++I+ + + LT +GIA K L Sbjct: 21 YSRYTPAIEVYSVDEVFLDIAGSIPLFNSIEHIAKKIKQDIHKHLGRLTCSIGIAPNKLL 80 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD 205 AKL + K + + + R L+ LPV ++WGIG +++K L A+GI T + Sbjct: 81 AKLGSDMKKPDG------LFIIEEKDIRSLLENLPVQELWGIGPKLAKHLAAIGITTCGE 134 Query: 206 LADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK--QEIICSRSFGERITDYPSM 263 L + ++ F ++ ER V +G + + + S + + I D ++ Sbjct: 135 LGRAQVTQLKHTFGIIGERLVLIAQGIDDSPVIPSEKESDAKSVGHSMTLEKDILDKETI 194 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII 323 + I + ++R R ++ I+ S F+ + S + TP D +I Sbjct: 195 ERMILQLSEMVGRRMRKGGYSGRTVTLTIRYSDFS------TLTKSKTIGTPINDGLNIY 248 Query: 324 NAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 A L+A + H + GV L + LF ++++ VMD +N + Sbjct: 249 LVACDILNA-TRPCHPIRLLGVCLSNLHKDYTQIP-LF---PAERTKQKVVRVMDEINNR 303 Query: 384 EGRGTLYFAGQGIQ--------QQWQMK 403 G ++ + W+ K Sbjct: 304 YGEFSITSGTLMNRYHHKGVISPAWRPK 331 >UniRef50_B7P2Q3 DNA polymerase IV / kappa, putative n=1 Tax=Ixodes scapularis RepID=B7P2Q3_IXOSC Length = 487 Score = 221 bits (562), Expect = 4e-56, Method: Composition-based stats. Identities = 78/359 (21%), Positives = 132/359 (36%), Gaps = 24/359 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++A++A+ E P L KP+ + N EA+ GV+ P F K Sbjct: 87 IVVHVDMDAYFAAVEMRDDPSLKDKPMAQAPFS-FLASTSNYEARKFGVRAAMPGFIGKK 145 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLTD 118 L +V N+ Y+ +S V + +DEA+ D+T N D D Sbjct: 146 LCPSLLIV--RPNFNKYSSVSAEVRKVMARYDEDFMPVGLDEAYLDITDHVNATDADPED 203 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 RE+R + + T LT + A LAK+ + K + ++ R+ + + Sbjct: 204 IVREMRKKIFEATQLTARI--APNMFLAKVCSDIRKPNNQFRLPN----DINAVREFVRS 257 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP+ V GIG + L A+G +T DL +R G C +++ Sbjct: 258 LPIRKVPGIGAVQEQLLRALGAQTCHDLWVKRAAIGHLFGMTSARFYLRAALGLGCTEVK 317 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + +F E ++ ++ + E++ + R ++ IKT F Sbjct: 318 C-DSACKSKSVEETFSE-LSSPEALVSKCEELCEQLCEQVEDDGITGRVVTLKIKTVAFD 375 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR-----YQKAGVMLGDFFS 352 + + SV L + T I AA R L A + GV L Sbjct: 376 VM------TRSVTLDSATNRIEPIKKAALRLLRQEIAAAKPDCPLRLRLMGVRLSGLND 428 >UniRef50_UPI0001745AF1 DNA-directed DNA polymerase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745AF1 Length = 405 Score = 221 bits (562), Expect = 5e-56, Method: Composition-based stats. Identities = 98/407 (24%), Positives = 156/407 (38%), Gaps = 28/407 (6%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D+++F+AS E P L G+PV V+ + IA + EA+ GVK G + L Sbjct: 7 LDLDSFFASVEQQLDPRLRGRPVGVVPVKSESTSCIAASKEARRFGVKTGTRVRDARQLC 66 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDFGR 121 +V S LY + R ++ LE E+ SIDEA+C L V N F R Sbjct: 67 PE--IVFVESRPRLYTEFHQRFVTALESRIQVAEVMSIDEAWCLLPKSVTNRTQAEAFAR 124 Query: 122 EIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++AT+ + LT +GIA + LAKLA+ K + + + L Sbjct: 125 SLKATLTSQVGDWLTYSIGIAPNRFLAKLASDMGKPDG------LFMIEQADLPHCLHQL 178 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLE 238 + D GIG+++ +L A GI+TV L + + + LRGE Sbjct: 179 KLRDFCGIGQKMETRLVAHGIRTVAQLTSATRETLHHVWGGIGGVHLWHWLRGEVTEPPP 238 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 I S R+ + C +AA +LR + + FIK + Sbjct: 239 TQRRV---IGHSHVLPTRLRNDLGTHAVSCRLLQKAAMRLRKMDHFTCRLELFIKYTNSP 295 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSL-DAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 TQD+ ++ A +AG + GV L Sbjct: 296 SWSSDISFC-------DTQDTFRLLEAFEVLWDRRPRRAGLEPKATGVNLSGLAPATKVT 348 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 +L + + +QL +MD +N + G+ + F G ++ R Sbjct: 349 PSLLEFDK---RQQQLCGLMDAINKRYGQNAVCFGGALGALEYTPMR 392 >UniRef50_B1AJ79 DNA polymerase IV n=15 Tax=Ureaplasma RepID=DPO4_UREP2 Length = 360 Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 75/366 (20%), Positives = 153/366 (41%), Gaps = 21/366 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AFYA+ + P+ P+ V S + G + + N A++ GVK P F Sbjct: 8 IIMHLDIDAFYATVSELLHPEYKNFPIAVGSLNSRTGIISSPNYLARSYGVKAAMPIFLA 67 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DL 116 K+L ++ S + +Y S + + + ++EI SIDE F D T + ++ Sbjct: 68 KELCP--NLIILPSEHNIYQSYSKHFFQIINKYTNKIEITSIDECFIDATDLVKKYHNNI 125 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +I+ + + +L++ +GI+ KT+AK+A K + + + L+ Sbjct: 126 RLLATKIQKEIKNKLNLSISIGISYNKTIAKMATELNKPSGIS------IIDENKIINLI 179 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADT-DIRFIRKHFNVVLERTVRELRGEPCL 235 L ++ + IG S++L A+ I + +L T + + I + + V +L+G + Sbjct: 180 YELNINKIPYIGEIKSQELYAINIFKIKELIATENKQKISLVLGSIYQNLVNDLKGLSKI 239 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ + + I S++F E + D+ + + +L+ + IS +IK Sbjct: 240 KIIDED-IYKTISHSKTFNEDLNDFYEISNEMNDLILTVTNRLKKCNLMTNNISIYIKYP 298 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F +L T D + I A +++ + G+ L + Sbjct: 299 SFKTKI------KQKQLTYYTDDYQTIFLAIKNLFKIMYKD-ETIRLIGISLNKLVKKEN 351 Query: 356 AQLNLF 361 + LF Sbjct: 352 VKKQLF 357 >UniRef50_C3AWZ9 DNA-damage repair protein n=3 Tax=Bacillus cereus group RepID=C3AWZ9_BACMY Length = 396 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 82/394 (20%), Positives = 156/394 (39%), Gaps = 18/394 (4%) Query: 22 LWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYAD 79 L K VV N V+A E K LG+ ++ + + ++ ++ + + Sbjct: 7 LKVKLAVVGDVNRKGSIVLACTPELKKLGISTATRLYE---IPKDPNIIIVNATMGRFVE 63 Query: 80 MSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTV 135 +SN++ + + ++SIDE F D+ + D I+ + T +T Sbjct: 64 ISNQITEIYTKYVALEDLHVFSIDECFLDMEQTAHLFGRDPIVIAERIQKEIYDTTGITA 123 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +GI L+K+A K +V + + +KL + P+ DV GIG L Sbjct: 124 SIGIGPNLFLSKVALDVESKH--SRSRIVLWTYEDVPKKLWNIKPLKDVCGIGSATQDAL 181 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL-EEFAPTKQEIICSRSF 253 MG+ ++ D+A+T + K F V E R G ++ ++ P I + Sbjct: 182 HGMGLFSLQDVANTPKERLIKRFGKVKGEELHRFSFGIDESRIANKYIPKSTSITKGQIL 241 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 E ++ I +LRS + CR + I S + ++ L Sbjct: 242 LEDCYSLNKLKLLILEQIEETCFRLRSMDKCCRTVELAIGYSKYIGGGFK----RAITLD 297 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 PT + D+ A+ + L +GH ++ + L + Q++LF+D + + +L Sbjct: 298 QPTCLTEDVYEASLQLLRRFH-SGHPVRQIHITLKNLTRDDAIQMSLFEDTSRKDTQRKL 356 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 MD++ + G+ ++ IQ Q +R Sbjct: 357 AKTMDSIRNRYGKNSIMRGISYIQGATQRERNNK 390 >UniRef50_C4XZD9 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4XZD9_CLAL4 Length = 1124 Score = 220 bits (561), Expect = 6e-56, Method: Composition-based stats. Identities = 69/468 (14%), Positives = 143/468 (30%), Gaps = 67/468 (14%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + P+L P+ V V + N A+A GV G Sbjct: 426 IIMHIDFDCFFATISALAHPNLDINKDPIAVSHGGKSSDVASCNYVARAKGVSNGMWLGT 485 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCRD 115 K V ++ Y SN+ + L + + + SIDE D+T N D Sbjct: 486 AKTHCPELNV--LDYDFVAYESASNKFYNYLIGKNVFDTIFPVSIDEVLVDVTSFCNQGD 543 Query: 116 L----TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + EIR+ + + T V +G ++ LAKLA AK + + Sbjct: 544 IVKNVESLSSEIRSDIYKLTKCPVSIGASKNVLLAKLATRKAKPRGQFYLY-------DD 596 Query: 172 QRKLMSALPVDDVWGIGRRISKKL-DAMGIKT---VLDLADTDIRFIRKHFN-VVLERTV 226 + L + D+ G+GR ++ KL + M + + + + + + F + Sbjct: 597 IESFLDDLTLKDLPGVGRGLTAKLAEEMDCGSQVLIRHVKSLPLDKLIRIFGEKTGSKIF 656 Query: 227 RELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + RG + E ++ + ++G R + + + + + ++L Sbjct: 657 QNCRGIDTTSISLDFSSVESLLGRKSVSVDVNYGIRFDTFEQVETFLMNLSKELYKRLSD 716 Query: 281 EHQYCRFISTFI---------KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 ++ + + S S +L PT D + + Sbjct: 717 LKLCGSSLTLKLAKRHPNAPVNPPKYMGMGLCTFLSKSSRLGIPTNDWGIVGSEIRSLYR 776 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVA----------------------QLNLFDDNAPRPG 369 + + + + F P Sbjct: 777 MLNVPPQELRGIAISMTKLQDIEQMKSHRQRTLEFNRAKNMRRQVKANSQEFPFAEPVSN 836 Query: 370 SEQLMTVM-----DTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYT 412 ++ + + D + + + L ++ SP T Sbjct: 837 AQSIDWAVFNQLPDAIRNELKKELLRRGIPVSAREKSPT--KRSPVKT 882 >UniRef50_D2QRX3 DNA-directed DNA polymerase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QRX3_9SPHI Length = 421 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 86/411 (20%), Positives = 153/411 (37%), Gaps = 30/411 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 D+N+F+ASCE L G+PV V + +GCVIA + EAK GVK G + Sbjct: 14 VLFVDMNSFFASCEQQDNYWLRGRPVGVCVYTGRNGCVIAPSVEAKLRGVKTGMRLDQAI 73 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 L +V ++ Y + +++ L S V SIDEA DLT + +D++ Sbjct: 74 VLCPE--LVPIETHPGRYREYHVKIIDVLRTFSDDVVPKSIDEAVVDLTNYQLVYKDMSQ 131 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 I+ + Q+ L +GIA LAKLA++ K + + E ++ Sbjct: 132 TAVAIKQAIRQKVGDWLRCSIGIAPNVFLAKLASNVQKPDG------LTIITPETIDSVL 185 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 + + D+ GIG R++ +L+A G++T L+L +R ++ Sbjct: 186 QTMTLTDLPGIGHRMAARLEAGGVRTPLELRYATPDHLRAVCKSIIGWHWHIRLNFGGEV 245 Query: 237 LEEFAPTKQEIICSRSFGERIT-DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + P + + R+ + + + + S ++ +C+ +S + Sbjct: 246 DLDTNPDNKSMSAMRTISQEQRSTPERLDELLQSLCLTLERRMVQRGVFCQDMSFSCRYH 305 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA-------GHRYQKAGVMLG 348 + P QD ++ L+ A + V + Sbjct: 306 NGKTYNYE------ARFNEPKQDGLELYGIIRERLEKFQLAHRCEPVLNEHLRSMCVAVF 359 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 F V L+LF + + + L AK G L A + Sbjct: 360 RFIPAEVVPLSLFGNEDRKGKFR---QTLYDLKAKFGTDKLIRATELRDNP 407 >UniRef50_A8EUX3 DNA polymerase IV n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EUX3_ARCB4 Length = 421 Score = 220 bits (561), Expect = 7e-56, Method: Composition-based stats. Identities = 82/438 (18%), Positives = 150/438 (34%), Gaps = 66/438 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 MF D++ F+ S E L PV V + Sbjct: 1 MFIHLDIDCFFVSAERTLNKSLLDIPVAVGGRSSNDIFSSKKVQRTIATNRAAFSSKILS 60 Query: 34 ------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 G + + EA+ GVK + L + ++ NY Sbjct: 61 NDTHKSFKEYFIDENGRIRGIITTCSYEARKFGVKTAMSVNEALRLCPKLKMI--PPNYS 118 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTV 135 LY ++SN++ LE+ P +E YSIDE FCD++G ++ +F ++ +L L + Sbjct: 119 LYDELSNKLKDLLEKEVPLIEQYSIDEFFCDVSGYIKEDEILEFAHFLKKKILDELDLPI 178 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +GIA TK L+KL AK + + + + +P+++ GIG+ + +KL Sbjct: 179 SIGIASTKYLSKLMTEYAKPNGIKY------VSSQDMPEFTKDIPIENFSGIGKALCEKL 232 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 I T+ D+ + + + + G +L ++ + RSF Sbjct: 233 KGYNINTLGDIRK--NQKLFYSWQKSGIDLYNRVCGIRDNKL-TIQRERKSLGIGRSFDV 289 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 + D +R+ + + + ++ E S I+ Y + Sbjct: 290 -VFDRNEVRRRVMILSRYLSFIIKKEKVNPLSYSILIRYEYGIKVRDYINVNR------- 341 Query: 316 TQDSRDIINAATRSLDAIW-QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 + D + + + H + + + +F NLFD L Sbjct: 342 LFNEVDFKAEMIKLFEVVDSHKTHGVIQLYITVFNFAKSNDFTANLFDYEEEIKKQ-ALT 400 Query: 375 TVMDTLNAKEGRGTLYFA 392 M L K G + A Sbjct: 401 NQMQKLRLKYGVDIVKSA 418 >UniRef50_Q6C2B9 YALI0F09141p n=1 Tax=Yarrowia lipolytica RepID=Q6C2B9_YARLI Length = 1219 Score = 220 bits (560), Expect = 8e-56, Method: Composition-based stats. Identities = 75/398 (18%), Positives = 140/398 (35%), Gaps = 31/398 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQ 58 + D ++F+ + T+ RPDL KPV V + + + + N EA+ GVK G + Sbjct: 518 IIMHLDFDSFFVAVSTLDRPDLTRKPVAVGSGGSRNADIASCNYEARKYGVKNGMWMSRA 577 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRN----- 112 L + N+ Y ++S + L E + S+DEA D T + Sbjct: 578 LKLCPD--LQTVDYNFPKYEEVSEAFYTILRESQLDYIRPVSVDEALVDATTLIEANATE 635 Query: 113 ---CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + I V T + VG ++ LAKLA AK GV + + Sbjct: 636 CSLSEAAETVAKAIATKVRATTGCNISVGCSRNILLAKLALREAKPN-----GVHVMFDQ 690 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADTD---IRFIRKHFNVVLERT 225 + +L+ + ++ GIGR I+ ++ + + T LA + Sbjct: 691 KAISQLLDKTKISEIPGIGRSIAGQIREKLHVSTAGKLARLKDVIPNMSALLGPKRGPQI 750 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 V G+ Q+ ++ I S+G R + + + +A A ++ Sbjct: 751 VDFCLGKDDSQIA-VQDERKSISVEISYGVRFENKKQFDGFVFNMSAELASRMEEISVEG 809 Query: 286 RFISTFI-------KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH 338 ++ + +T + + + SV L + +I AA A+ Sbjct: 810 SQLTCKLYVRKNEHETPKYMGHGQCDIYNKSVSLGCSVSSTSEINLAARGQFAAMGYDPV 869 Query: 339 RYQKAGVMLGDFFSQGVA-QLNLFDDNAPRPGSEQLMT 375 + G+ + + ++ D N R L Sbjct: 870 LVRGVGIQITKLTRDKGKGKQSMLDFNRGRTTRPDLRA 907 >UniRef50_C9RQ99 UMUC domain protein DNA-repair protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RQ99_FIBSS Length = 466 Score = 220 bits (560), Expect = 9e-56, Method: Composition-based stats. Identities = 80/451 (17%), Positives = 150/451 (33%), Gaps = 47/451 (10%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +F+AS E V R D +VV + +A + KA G+ F+ Sbjct: 10 YVAIDLKSFFASVECVLRGLDPLSTNLVVADASRTEKTICLAVSPSLKAYGIPGRARLFE 69 Query: 58 QKDLFR--------RCGVVCFSSNYELYADMSNRVMSTLEELS--PRVEIYSIDEAFCDL 107 R + Y + S RV + + + +YSIDE F DL Sbjct: 70 VIQKVREVKRQTGKDVEYIVAPPQMAKYVEYSTRVFNVYLKYVSADDIHVYSIDECFIDL 129 Query: 108 TGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH-AAKKWQRQTGGV- 163 T + + +E+ VL+ T +T GI L K+A AK GV Sbjct: 130 THYLSMYKKSARELAKEMIRDVLETTGITATAGIGTNLYLCKIAMDVMAKHVAPDADGVR 189 Query: 164 -VDLSNLERQRKLMSALPVDDVWGIGRRISKKL------DAMGIKTVLDLADTD---IRF 213 +L + +++L P+ W +GR I+++L + GI T+ DLA Sbjct: 190 IAELDEMTYRKELWGHRPITSFWQLGRGIAERLAHCYLNNGRGIFTMGDLARASVKHPDA 249 Query: 214 IRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 + K F V E + G +++++ I + D + I Sbjct: 250 LYKMFGVNAEILIDHAWGYEPCGIAEIKQYKSKTHSIGGGQVLSCA-YDCAKAKIVIREM 308 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYG---------------NSASVKLLTP 315 A L + ++ + +++ Y + L+ Sbjct: 309 VDTLALDLVEKGLVTNGLTLHVGYDRENVDKGIYHGETVIDNYGREIPKPAHGTAPLMNY 368 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 T + I A + D I ++ + + +LF D +++M Sbjct: 369 TSSASTIAEAVMKLADRIMNPLLTVKRLNLTANNVLEATQESYDLFTDVKKIEREKKMMQ 428 Query: 376 VMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 + + G+ ++ + +R Sbjct: 429 AQIAIKKRFGKNAIFKGMDMQEGATTRERNQ 459 >UniRef50_B3PM57 Pol_IV_kappa DNA polymerase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PM57_MYCA5 Length = 416 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 88/372 (23%), Positives = 157/372 (42%), Gaps = 24/372 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AF+ +CE P L +PV + + + + E K LG++ GDP K K Sbjct: 8 IFHIDMDAFFINCERAIDPRLDNQPVAIGKVHKRSIATSVSYELKKLGLRPGDPSLKVKH 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLE-ELSPRVEIYSIDEAFCDLTGVR--NCRDLT 117 L V+ +Y+LY+ S R+ LE + +EIYSIDE + ++T + Sbjct: 68 LCP--NVIFVEPHYQLYSSYSKRIFDYLETHYTHTIEIYSIDECYLEVTTILNNRKISAQ 125 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 EI+ +L + L +GI+ TK LAK++ + AK + + + K Sbjct: 126 ALAFEIQKNILDKFQLPCSIGISFTKFLAKMSTNKAKPFGILE------TKKQDIEKHFY 179 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLAD-TDIRFIRKHFNVVLERTVRELRGEPCLQ 236 L + +++G+G+ + KL GI T DL + + +F+R F + EL+G L Sbjct: 180 DLDIQEIFGVGKASTAKLKEYGINTYRDLVNEKNTQFLRSVFGKRFYSLILELKG-DNLH 238 Query: 237 LEEFAPTKQEIICSRSF-GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + I S SF I D+ + + A +E+ + + I+ I+ + Sbjct: 239 DHVQNEEAKGISNSMSFIENNIADFNEISNCLYELAENVSERAKITNVEGSTITVMIRWA 298 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 +S ++ T + DI N L+++W + G+ + + S Sbjct: 299 N------KNWSSKQKRIHFYTNEVNDIYNFGKDLLESLWDQSA-IRGIGIAISNLRSIFN 351 Query: 356 AQL--NLFDDNA 365 +LF D Sbjct: 352 RDNAFDLFCDFK 363 >UniRef50_C7I020 DNA-directed DNA polymerase n=1 Tax=Thiomonas intermedia K12 RepID=C7I020_THIIN Length = 415 Score = 219 bits (558), Expect = 1e-55, Method: Composition-based stats. Identities = 95/410 (23%), Positives = 164/410 (40%), Gaps = 21/410 (5%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKD 60 L D N+++AS E P+L G+PV V+ + C IA + EAKA GVK G + + Sbjct: 6 LLVDFNSYFASVEQQLCPELRGRPVGVVPMLADTTCCIAASYEAKAFGVKTGTQVAEARR 65 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L G+V + + Y + +R ++ ++ ++P ++ SIDE C L G + T Sbjct: 66 LCP--GIVFVVARHAEYVQIHHRAVAVVDTIAPVEQVLSIDEMACSLPMGWTSRERATQL 123 Query: 120 GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 ++A + + L V VGIA LAK A++ K + + + + Sbjct: 124 ALRLKAALREALGECLRVSVGIAPNVFLAKQASNLQKPDG------LVVIDAGDLPGPLL 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQ 236 + + D+ GI R+ +L A GI +V L +R + + E L G Sbjct: 178 RMQLTDLTGINVRMLARLQAQGIHSVEHLWRARREQLRVVWGGMAGEAFYDRLHGLASG- 236 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + A ++ + S + + +AA +LR EH ++ +K + Sbjct: 237 -VQAANPRRSLGHSHVLPPEMRSAEGALAVLDRLTQKAAMRLRREHLLAGAMTVMLKLTR 295 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 A PT D+R +++ + AG K ++L D G Sbjct: 296 RHGERLRPERGARF---APTADTRALLHTLRELWPGMVPAGWAPMKVAMLLHDLRQPGQT 352 Query: 357 QLNLF--DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 +LF D L + +D LN + GR T+Y ++ R Sbjct: 353 SASLFEGDVPGTEAEQAALWSAVDALNVRYGRHTIYCGSGHQGREEAPMR 402 >UniRef50_C4R1P8 Deoxycytidyl transferase, forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p n=1 Tax=Pichia pastoris GS115 RepID=C4R1P8_PICPG Length = 958 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 68/398 (17%), Positives = 133/398 (33%), Gaps = 33/398 (8%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWF 56 + D + F+A+ + PD+ +P+ V G V + N A+ GV G Sbjct: 295 IIMHIDFDCFFAAVSALSHPDIDFANEPIAVSHGGKGSSDVSSCNYAARKFGVSNGMWVN 354 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-VEIYSIDEAFCDLTGVRNCRD 115 + +L + +++LY + S L + P + S+DEA L+ + + Sbjct: 355 RALELCPELKI--LDYDFKLYEEKSKIFYEELTRIEPDCIFPVSVDEALIGLSSIDDEES 412 Query: 116 -LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 L + ++R + T TV +G + LAKL AK G+ Sbjct: 413 TLLNICEKLRNKIYVLTGCTVSIGASYNVLLAKLCLRKAKPN-----GIFFFFQPNNVGN 467 Query: 175 LMSALPVDDVWGIGRRISKKLDAM---GIK---TVLDLADTDIRFIRKHFN-VVLERTVR 227 + +PV + GIGR+I +L G K T+ +L+ + K F + Sbjct: 468 FLKNIPVKQLPGIGRKIEDRLSNHLNKGSKETVTISNLSSVSRDTMVKFFGIKTGTKLFG 527 Query: 228 ELRGEPCLQLE----EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 +G ++ ++ I ++G R + + + A ++L Sbjct: 528 YCQGLDDTDIDISKNPSKFIRKSISIDVNWGIRFEKQTQVDEFLSRVADHICQRLLRLGF 587 Query: 284 YCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 + + + S S L PT++ I I Sbjct: 588 VGARLMLKLARRTKGAPIDPPKYLGMGLCDFLSKSTNLGAPTREVGLIATELKSLYRIIG 647 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 A + V + + + D + +++ Sbjct: 648 VAIADLRGVSVTISELQKCDSDATSAVDQKQLQFEAKK 685 >UniRef50_UPI0000DB6FEF PREDICTED: similar to DNApol- CG7602-PA, isoform A n=1 Tax=Apis mellifera RepID=UPI0000DB6FEF Length = 540 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 76/447 (17%), Positives = 143/447 (31%), Gaps = 68/447 (15%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 DV+ FYA E + P+L KP+ V V+ N A+ G+K + L Sbjct: 16 IIHIDVDCFYAQVEMLRHPELENKPLGV--QQKNMVVTSNYIAREYGIKKCMSVQEALRL 73 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV----------- 110 +V + Y S +++ L + +P VE D+ F D+T + Sbjct: 74 CPGLALVNGE-DLTNYRHFSTKILEILHQFTPLVERLGFDDNFMDVTSIVQKYMNSGNNS 132 Query: 111 ------------------------------RNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 + EIR + + H+T GIA Sbjct: 133 ELNINISMEDENPVGEIFGASEEECPCGCHARLIIASKIAAEIRERIYKDLHVTCSAGIA 192 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLDAMG 199 K LAKL K Q+ L L+S + V + G+G++ ++ L + Sbjct: 193 HNKLLAKLVGSLHKPNQQ------TLIFPCSAPMLLSNIGSVSKIPGVGQKTTQLLMSNN 246 Query: 200 IKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 IKT+ DL T + + + L R G ++ KQ I F + ++ Sbjct: 247 IKTIDDLRKTSLETLEMKIGIDLARKLKDNAEGIDETVVKPTG-KKQSIGLEDGF-KSVS 304 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP--- 315 + + + R E + + + ++ F + + L Sbjct: 305 LVAEVESRLGALLRRLTELAMEDGRIPVAMRLTVRKHDFNKSSSGKRETRQCALPKHLLP 364 Query: 316 -----TQDSRDIINAATRSLDAIWQAGHR--YQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 D ++ A + GV F + + ++ + Sbjct: 365 SSKSGVYDHAKMLTLAMKLFHRTVDVSKPFHLTLLGVAFTKFEERSSGKNSI---TSFLR 421 Query: 369 GSEQLMTVMDTLNAKEGRGTLYFAGQG 395 + +V+D ++++EG + Sbjct: 422 KQVAVQSVLD-ISSEEGISDINLGSPM 447 >UniRef50_B8P0X5 Predicted protein (Fragment) n=1 Tax=Postia placenta Mad-698-R RepID=B8P0X5_POSPM Length = 527 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 68/358 (18%), Positives = 129/358 (36%), Gaps = 40/358 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E + P L GK + EA+ GV+ G P F K L Sbjct: 92 IVHVDMDAFYASVELLDDPSLEGKAFA------------SYEARKYGVRSGMPSFIAKKL 139 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDF 119 +V +++ Y ++S +VM+ P + DE + ++T + + Sbjct: 140 CPDLILV--ENHFHRYMELSKKVMNIFRRYDPSMCAAGCDEGYLNITAYCRDQQLTADEC 197 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 R++R TV Q T LTV GIA K K + T + M L Sbjct: 198 VRQMRETVYQETKLTVSAGIAPNK---------NKPNGQFTLDF----EPRAIKAFMRNL 244 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + + G+GR + LD++GIKT D+ + L+ ++ G ++ Sbjct: 245 SIRKIPGVGRVNERLLDSIGIKTCGDIYTHRVVVSLMDKEFGLQFLLQTYLGIASNVVQP 304 Query: 240 -FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ I R+F + + ++ + AA + S + ++ K + Sbjct: 305 GQREERKSIGAERTF-HPLGNQDAILCKLEEVAAELESDMTSGGWTGKTVTLKFKLDTYQ 363 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + + + ++ + A + + + G+ + V Sbjct: 364 V------FTRAKSFDRWVSTKKEDLYAVKLLMPEM---PLTLRLIGLRVTKLKDLRVE 412 >UniRef50_Q0F3E1 ImpB/MucB/SamB family protein n=2 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3E1_9PROT Length = 366 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 91/361 (25%), Positives = 156/361 (43%), Gaps = 16/361 (4%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 +IA+ +AKA G+K G P + K L S+++ Y +S ++ S L SP +E Sbjct: 1 MIAKTYDAKAAGIKTGMPIWDAKKLMPHATY--LSADFRFYGLISEKMFSILRRYSPDME 58 Query: 97 IYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 +YSIDE F DL G R D +IR V + +TV VG++ T+ LAK+A+ K Sbjct: 59 VYSIDEGFLDLNGTRQLWKKDYKGIAHDIRRAVHREVGITVSVGVSVTRILAKIASEYNK 118 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 V + + + + + DV GIGR L+ I T +D + DI I Sbjct: 119 PNG------VTIVPSSMIQLFLKRVKLSDVCGIGRNRLATLNKFSIHTPMDFVNADIEVI 172 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 ++ E++G + LE A + + + S GE + ++ + + +R Sbjct: 173 KQLLGKAGTDLWHEMKGTMAIGLELHAQLPKSMARTASMGEVTGNRKTIISHLIRHTSRL 232 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 A +L ++ + I+ F++ F+ SA PT + + + + ++ Sbjct: 233 ATELVTKRLLTKRITIFLRLKDFS------SLSAQADFEYPTNNYFRLSRSVQAMMADLY 286 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 Q Y+ G++ + + +LF + MD +N K GRGTL AG Sbjct: 287 QPNELYRACGIIAESITNAEDSMPDLFGVMKTDAKQASIFATMDDINKKYGRGTLRVAGA 346 Query: 395 G 395 Sbjct: 347 H 347 >UniRef50_Q4D5I0 DNA polymerase kappa, putative n=4 Tax=Trypanosoma cruzi RepID=Q4D5I0_TRYCR Length = 604 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 75/357 (21%), Positives = 124/357 (34%), Gaps = 25/357 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ E P L P+ V + + + N A+ GV+ G P + L Sbjct: 159 YVHVDMDMFYAAVEMKKNPSLVDVPLGVGTFD--MLSTTNYVARRYGVRSGMPGYIGVKL 216 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT---D 118 +V ++ + Y + V P +DE ++T D Sbjct: 217 CPS--LVIVPTDLDAYHAEAAVVRGIAAAYDPNFTSVGLDELTMEVTAYLQQHPGMTAGD 274 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E RA V T LT GI T TLAK+A++ K + + L + + M Sbjct: 275 VASEFRARVFAETQLTASAGIGPTATLAKIASNYEKPNGQHE---LRLRTRQDVMEFMKD 331 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV V GIGR L +GI + ++ D + + G Sbjct: 332 LPVRTVPGIGRSTESILHGLGINLLGEIYDRRVELCYILTEKTFCFLLGSSMGVVRWMDA 391 Query: 239 E--------FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + ++ I R+F ++ ++Q S A +L +CR I Sbjct: 392 DTNDGSERTTEAERKSIGMERTF-RNLSSRLELQQIAHSALQTAHRRLEENELFCRQIVL 450 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 K + F +++ S L + D + L I + GV L Sbjct: 451 KTKRASFQVHQY------SKNLPQHSDDLETLRRGVDELLLRIADQYAFLRLVGVRL 501 >UniRef50_C7N9E0 DNA-directed DNA polymerase n=5 Tax=Fusobacteriaceae RepID=C7N9E0_LEPBD Length = 363 Score = 217 bits (553), Expect = 6e-55, Method: Composition-based stats. Identities = 72/374 (19%), Positives = 147/374 (39%), Gaps = 30/374 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++AF+A+ E +L GKP+ + G V + EA+ G+K P + K Sbjct: 6 IYLHYDMDAFFAAIEQRDNKELRGKPIAIGH---GVVTTASYEARKFGIKSAMPTVQAKR 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD----- 115 L ++ S ++Y + R+ ++ + + E S+DE + D+T ++ Sbjct: 63 LCPS--LIVVSLRKDIYFEEGRRIQGLIKNILKKCEFTSVDEGYIDITEFIQNKNIKLDK 120 Query: 116 ------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + F ++ + + + LT VGI +K AK+A+ K N Sbjct: 121 RDEILKIERFIKKFKQYIYDNSKLTCSVGIGFSKISAKIASDINKPNGYFIFK-----NR 175 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRE 228 E + + + + GIG++ + L TV L + + + + F E Sbjct: 176 EHFLEYIYDKNLAIIPGIGKKTREVLKLFNTTTVFQLYEIEKNELIRRFGMSKGEYLYNT 235 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 +RG ++ +Q +F D + + + + + KL ++++ + + Sbjct: 236 VRGLHFTEINT-DRKRQSYGHEITFNREENDISIIYDELKKQSNKLSRKLIEKNEFAKTV 294 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + I+ S F + + S L T + I A +L+ ++ + GV L Sbjct: 295 TVKIRYSNFVTH------TRSRTLENATNNENKIYEATLENLN-FFEKKDEIRLIGVQLS 347 Query: 349 DFFSQGVAQLNLFD 362 V QL+ D Sbjct: 348 SILKSNVVQLSFND 361 >UniRef50_B3RS03 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RS03_TRIAD Length = 653 Score = 217 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 84/429 (19%), Positives = 139/429 (32%), Gaps = 75/429 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E P L KP+ V G ++ N A+ GV+ P F K L Sbjct: 88 IVHVDMDAFYAAIEIRDNPSLADKPMAVGGT--GMMLTSNYIARRYGVRAAMPGFIGKRL 145 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV-------------------------- 95 +V N YA S V + L E P Sbjct: 146 CPD--LVFVKPNSAKYAQASKEVRAILAEYDPNFASVSLDEAYMDLTEYLEGRKCTFPSS 203 Query: 96 --------------------EIYSIDEAFCD----------LTGVRNCRDLTDFGREIRA 125 E+ D + V + D REIR Sbjct: 204 HVEFTVPQQDLTEDMLKILNEVAPPTVDGVDSYNNCSSNSSIRKVSFGHTIEDVMREIRF 263 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + ++T LT GI K LAK+ + K + ++ + M LP + Sbjct: 264 KINRKTKLTASAGIGPNKMLAKICSDWKKPNGQFKVEF----TRDKIIEFMRQLPTRKIS 319 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ 245 GIG+ + L+ + I +L D NV + + G ++ ++ Sbjct: 320 GIGKVSERLLNEIEISNCKELYDKRDLIYLLFSNVSTKFFLAVAMGIGSNEVSSKNYQRK 379 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYG 305 I C R+FGE I+ M A ++ E+ R ++ +KT F + + Sbjct: 380 SISCERTFGE-ISRLADMLVKCQKLCDNLANHMKKENITGRCLTVKLKTVAFEVKQ---- 434 Query: 306 NSASVKLLTPTQDSRDIINAATRSLD----AIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 SV L T + ++ N A+ + A R + G+ + + ++ Sbjct: 435 --RSVSLKHHTNSTTEMFNIASEVIRSERLACQPERLRLRLMGIKMSTLKRHESDEKSIQ 492 Query: 362 DDNAPRPGS 370 D Sbjct: 493 DTLTRYFNK 501 >UniRef50_A5E4H3 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5E4H3_LODEL Length = 1301 Score = 217 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 69/389 (17%), Positives = 130/389 (33%), Gaps = 39/389 (10%) Query: 1 MFALCDVNAFYASCETVFRPDLW--GKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 + D + F+A+ + P+L P+ V + V + N A+ GV+ G + Sbjct: 536 IIMHIDFDCFFATASCLKHPNLDIDRDPIAVGHGGETSDVASCNYVARKYGVRNGMWFRL 595 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRN--- 112 + L + +E+Y S+ + L + + SIDE D + Sbjct: 596 AQALCPNLTL--LDYEFEIYEKCSSEFYNYLVTSDYFDTIFPVSIDEVLVDASSYCFKSE 653 Query: 113 ---CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 +T+ IR V Q T +V +G + LAKLA AK + Sbjct: 654 KPIEEAVTELCSLIRKHVFQLTKCSVSIGASFNVLLAKLAIKRAKPNGQFFL-------H 706 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT---VLDLADTDIRFIRKHFN-VVLERT 225 + K + +P+ D+ G G+ I +KL+ KT +LD+ + + + Sbjct: 707 KDIEKELFEVPIKDLPGFGKGILEKLEPEIDKTNPKILDIINLPRSRLILLVGEKTGTKL 766 Query: 226 VRELRGEPCL--QLEEFAPT----KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 RG +++ P ++ I +FG R + + A E++ Sbjct: 767 HEYARGIDNTSIEVDTSNPEAVLGRKSISVDVNFGIRFDTVEELDEFFMRLARELYERMV 826 Query: 280 SEHQYCRFISTFI---------KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 + ++ + T+ F + S +L T D I N Sbjct: 827 NLGLCGSILTLKLAKRAPGADVVTAKFLGLGQVEFVNKSSRLGVATNDWGVIGNEIKVLY 886 Query: 331 DAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 I + V + + + Sbjct: 887 RMINIPVKDLRGISVSMTKLKDVDSMKSS 915 >UniRef50_A6DEG1 DNA-directed DNA polymerase n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DEG1_9PROT Length = 404 Score = 217 bits (552), Expect = 7e-55, Method: Composition-based stats. Identities = 78/426 (18%), Positives = 154/426 (36%), Gaps = 60/426 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 M D++AF+ S L GKP VV+ + Sbjct: 1 MKIHLDLDAFFVSAHRTKDKSLIGKPAVVVKTHDKEIFELKKTKVLNLNKGAFTGDIIVT 60 Query: 34 -------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 G ++ + EA+ G+K G + K ++ V+ +Y LY +S ++ Sbjct: 61 NQELEENRGIIVTASYEAREFGIKTGMTLLEAKKIYPNLTVI--KPDYHLYHLLSYKLKL 118 Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 L + P +E +SIDE F DL G + +++ F ++ + + L + +GIA++K A Sbjct: 119 FLRKKIPLIEQFSIDEFFGDLEGWVDEKNVLKFCYNLKQEIYDKFSLPISIGIAKSKWSA 178 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 KLA AK + + + + + GIG+RI ++L + GI T+ DL Sbjct: 179 KLATSFAKPNGVFKV--------DDVYEFIKNIDIAKFPGIGKRIERRLKSRGILTLGDL 230 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + + + + + + GE ++ E ++ + SR F I D + + Sbjct: 231 VK--NKEYILSWGKMGDVLYKRVIGEDNEEVFERED-RKSVGISRRFDV-IYDREEIMRR 286 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 I A + + F I+ ++ + + + Sbjct: 287 IKILCRFLAFLVTKKKLNPTFYYLKIRYKNGQKSKAHLKVER-------IFNELLLKEIM 339 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 + + + +++ F NLFD +E+L ++ + K G Sbjct: 340 SFLFLRVDEYDDGIVSISLVVSRF----KRVSNLFD-YEKDIKNEKLNKAINKIREKYGV 394 Query: 387 GTLYFA 392 + Sbjct: 395 DIMVSG 400 >UniRef50_Q9UNA4 DNA polymerase iota n=24 Tax=Chordata RepID=POLI_HUMAN Length = 715 Score = 217 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 81/410 (19%), Positives = 144/410 (35%), Gaps = 61/410 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P+L KP+ V V+ N EA+ LGVK K+ Sbjct: 29 VIVHVDLDCFYAQVEMISNPELKDKPLGV--QQKYLVVTCNYEARKLGVKKLMNVRDAKE 86 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--------- 111 + +V + Y +MS +V LEE SP VE DE F DLT + Sbjct: 87 KCPQLVLVNGE-DLTRYREMSYKVTELLEEFSPVVERLGFDENFVDLTEMVEKRLQQLQS 145 Query: 112 --------------------------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + E+R + + LT G+A K L Sbjct: 146 DELSAVTVSGHVYNNQSINLLDVLHIRLLVGSQIAAEMREAMYNQLGLTGCAGVASNKLL 205 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLDAMGIKTVL 204 AKL + K Q+ + E + L+ +L + ++ GIG + +K L+A+GI +V Sbjct: 206 AKLVSGVFKPNQQ------TVLLPESCQHLIHSLNHIKEIPGIGYKTAKCLEALGINSVR 259 Query: 205 DLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 DL + + K + +R + GE + P Q SF + + Sbjct: 260 DLQTFSPKILEKELGISVAQRIQKLSFGEDNSPVILSGPP-QSFSEEDSFKK-CSSEVEA 317 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT------- 316 + I A ++ + + + I+ ++ + Y S + + Sbjct: 318 KNKIEELLASLLNRVCQDGRKPHTVRLIIR--RYSSEKHYGRESRQCPIPSHVIQKLGTG 375 Query: 317 --QDSRDIINAATRSLDAI--WQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 +++ + + + V + + A+ L D Sbjct: 376 NYDVMTPMVDILMKLFRNMVNVKMPFHLTLLSVCFCNLKALNTAKKGLID 425 >UniRef50_A8IAM0 DNA polymerase kappa (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8IAM0_CHLRE Length = 429 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 70/355 (19%), Positives = 124/355 (34%), Gaps = 26/355 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ +P+L PV V G + N A+ GV+ P F K L Sbjct: 90 WLHVDMDCFYAAVHEREQPELKRLPVAVGGM--GMISTANYVARRFGVRSAMPGFIGKRL 147 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDF 119 +V ++ Y + + V ++L P E +DEA+ D+TG + Sbjct: 148 CP--KLVFVKPDFAKYTEAAAVVRGAFKQLDPDFESGGLDEAYLDVTGYCTRTATSGEEA 205 Query: 120 GREIRATVLQ-RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+R V + LT VG+A K LAK+ + K + + + Sbjct: 206 ATELRRLVKEVSGGLTCSVGVACNKMLAKICSDINKPDGQYVLPA----SRAAVMSFLDT 261 Query: 179 LPVDDVWGIGRRISKKLDA-MGIKTVLDLAD-TDIRFIRKHFNVVLE-RTVRELRGEPCL 235 LPV + IG+ + L +G+ T L + F+ + G Sbjct: 262 LPVRKIPCIGKVTEQVLQGVLGVSTCGQLLAPASRCRLPLLFSEAAAGFFLEAALGLAPT 321 Query: 236 QLEE-----FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + P ++ + R+F ++ + E R I+ Sbjct: 322 RHGPKTDTSVDPGRKGLSHERTF-RNMSAPAEQEAMAKQLVEALVADMAEEGIEGRNITL 380 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 +K S F ++ + + + + DI+ A R L A R + Sbjct: 381 KLKLSTFEVH------TRAATMPRHVRTVSDILPAVLRLLRAEMPVTLRLMGVRM 429 >UniRef50_Q0FDK2 UMUC-like DNA-repair protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FDK2_9RHOB Length = 401 Score = 216 bits (551), Expect = 8e-55, Method: Composition-based stats. Identities = 86/400 (21%), Positives = 154/400 (38%), Gaps = 27/400 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQKD 60 D+N+F+AS E P L GKPV + + GC++A + EAK GVK + K Sbjct: 7 IYIDMNSFFASVEQHEEPYLRGKPVGITAMEGDVGCLVAASYEAKYFGVKTTMSIKEAKI 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTDF 119 L ++ S + LY + R+ ++ + + S+DE L G N + Sbjct: 67 LCP--KIILRPSRHRLYVRYNQRIARIFDQYAELEYVRSVDEFQIALGGTTSNLNVASKL 124 Query: 120 GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + ++ + L GI LAK+A K Q + + + +S Sbjct: 125 VKTMKDALKYEIGENLKFSAGIGSNHLLAKIAGKLEKPDGMQ------WLSPDNMPQRLS 178 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 +P+ D+ GIGR + KL++ GI + + D R RK + ++ ER +R L+GE Sbjct: 179 NIPLGDLPGIGRGVLFKLNSAGIHNCEQMYNLDPRHARKIWGSIIGERFIRLLQGED--- 235 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + S+ + ++ +LR ++ S F++ Sbjct: 236 IPLETTKRGGYGNSKMLAPENRTLKNAYLVSRWLIEKSVARLRRDNYTASQFSLFLR--- 292 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR--YQKAGVMLGDFFSQG 354 + P SVK +QD+ ++ R ++ H V LG+ Sbjct: 293 --IQNPRNRWGHSVK-THYSQDTAHFLDINRRLWRMMYSQKHPYLISSISVHLGNILPLN 349 Query: 355 VAQLNLFDDNAPRPG--SEQLMTVMDTLNAKEGRGTLYFA 392 + E+L +DT+N + G T+ + Sbjct: 350 KRSGEMLLPMEMAKKNDRERLSRTLDTINKRFGASTITYG 389 >UniRef50_C2D8D4 Possible DNA-directed DNA polymerase n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8D4_9ACTN Length = 466 Score = 216 bits (551), Expect = 9e-55, Method: Composition-based stats. Identities = 72/427 (16%), Positives = 135/427 (31%), Gaps = 28/427 (6%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ FYAS E R + + +VV + G +A KA GV+ ++ Sbjct: 39 YMCIDLKTFYASVECADRGLNPFTTNLVVADPDRGEGTICLAVTPALKAQGVRNRCRVYE 98 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCRD 115 + + + + Y D+S R+ S E+ + YSIDE F + + Sbjct: 99 ---IPKDITYLKVKPRMQHYVDVSARIRSIYEQFCAPCDIFPYSIDECFIYIAPYIKRYN 155 Query: 116 L--TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 + + + V ++ H+ GI LAK+A K G++ R Sbjct: 156 MSSQQIAQMLIDAVYEQEHICATAGIGSNMFLAKIAMDIIAKHNNAHMGILT--KTLFYR 213 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 + P+ D+WGIG ++KL G+ + + + + F + + G Sbjct: 214 DIWHHRPLTDIWGIGSSTAQKLARYGVFDLHGVCGIPNEIMLREFGIGAHTLIHHAWGLD 273 Query: 234 C---LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 ++ + P Q I + + + +L E C I+ Sbjct: 274 LCTITSIKAYKPQHQSISNGQVLMRD-YSEAEAKSICKEMIYDSCLRLIEERNTCSCITL 332 Query: 291 FIKT-----------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 + L + S L T + D Sbjct: 333 EVMYTNTPLAQINSIDSVYLKNRQHTLHCSHTLSYHTASRSILEQILDTLWDTRVDKDRL 392 Query: 340 YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +K + LG+ Q LF+ + +L + K G+ +L + Sbjct: 393 IRKICITLGNLKPQAQVTPTLFEGDESHTNEYKLAHATLAVKHKYGKNSLLRGTSLLPHA 452 Query: 400 WQMKRAM 406 +R Sbjct: 453 TGRQRNQ 459 >UniRef50_A8PXZ2 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PXZ2_MALGO Length = 525 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 76/378 (20%), Positives = 134/378 (35%), Gaps = 25/378 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 CD++ FYA+ E RP+L G V G ++ + EA+ GV+ F + + Sbjct: 42 ILHCDMDMFYAAVELQRRPELAGACFAVGH---GVLLTASYEARQFGVRSAMAEFVARAI 98 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD---LTD 118 ++ ++ ++Y S VM+ L + ++ S+DEA+ D+T D Sbjct: 99 CP--NLIVVPAHMDVYKRSSEAVMAVLAKYDAQLYQRSLDEAYLDITSYCAEHGHAHPRD 156 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++RA VL T LTV VGIA + LAK+A+ K + M Sbjct: 157 VAAQLRADVLAATGLTVSVGIAPNRLLAKIASDRCKPNGLWYVAP----TRQDALAFMHD 212 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 L V V GIG+ + + L AM I T DL + I + G + Sbjct: 213 LSVRKVPGIGQVMERMLQAMSIHTCHDLWERRIEL--SLCIDSYRMLLASALGIGDAHVT 270 Query: 239 -EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + +F +D + + + + L + R +S K F Sbjct: 271 LPARTARRSVGRELTFA-PTSDPTHLHAKLRATCEQLERDLATLEYRGRTVSLVGKHDTF 329 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFSQG 354 + + D+ L+ + + GV + Sbjct: 330 E------RFTRARACPQGVSSFDDLYGVVHALLEQERASFPVPLCLRLIGVRVSSLIDLQ 383 Query: 355 VAQLNLFDDNAPRPGSEQ 372 VA+ + P + + Sbjct: 384 VARNGVLAQWLRMPAAAR 401 >UniRef50_UPI0000167505 COG0389: Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Bacillus anthracis str. A2012 RepID=UPI0000167505 Length = 318 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 64/331 (19%), Positives = 125/331 (37%), Gaps = 15/331 (4%) Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + L + +++ SIDE + D+T + + I+ +L L +GIA Sbjct: 1 MFQILSRFTEKIQPVSIDEGYLDITDCYALGSPLEIAKMIQQALLTELQLPCSIGIAPNL 60 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 LAK A+ K + +++ LPV + GIG + ++KL+ + I+T+ Sbjct: 61 FLAKTASDMKKPLGI------TVLRKRDIPEMIWPLPVGAMHGIGEKTAEKLNDIHIQTI 114 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP-TKQEIICSRSFGERITDYPS 262 LA + IR R +G +++ + + S +F + + + Sbjct: 115 EQLAKGNEHIIRAKIGKHGVDLQRRAKGMDDREVDPSQMGQHKSVGNSMTFSKDMDEEKE 174 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + + + +++L+ I IK + S +L + RDI Sbjct: 175 LLDMLQRLSKSVSKRLQKRTLVSYNIQIMIKYHDRR------TVTRSKQLKNAIWEERDI 228 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL-FDDNAPRPGSEQLMTVMDTLN 381 AA+R W G + GV + + + L E L+ V+D +N Sbjct: 229 FQAASRLWKQHWD-GDSVRLLGVTATEIEWKTESVKQLDLFSFEEDAKEEPLLAVIDQIN 287 Query: 382 AKEGRGTLYFAGQGIQQQWQMKRAMLSPRYT 412 K G L Q +++Q + + L ++ Sbjct: 288 DKYGMPLLQRGSQLLRKQEKSFQQKLESKFM 318 >UniRef50_UPI0000F2F527 DNA-directed DNA polymerase n=1 Tax=Acinetobacter baumannii ATCC 17978 RepID=UPI0000F2F527 Length = 375 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 122/375 (32%), Positives = 192/375 (51%), Gaps = 4/375 (1%) Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLT 108 MG+P F+ DL R V+ SSNY +Y +MS R L E EIYS+DEAF +LT Sbjct: 1 MGEPLFQILDLVMRNDVIVLSSNYIIYGEMSRRFHKILAEYVSPENHEIYSVDEAFLELT 60 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 R +L ++I+ +L+ L V VGI ++KT AK+ N+ AK + G Sbjct: 61 SYRGIYNLNQCAQDIKEKLLKLLSLPVCVGIGRSKTEAKIMNYIAKTYPHLNGICNVFDL 120 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 E + + V +VWG+G + KKL M I TV DL I+ F+VVL+RTV E Sbjct: 121 AEVKDSIFRNTDVGEVWGVGSQQKKKLRLMNINTVYDLMTASPSHIQSVFSVVLKRTVLE 180 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 L G C+ +E PTK++I+ SR+FG+RITD +++A+ A + R+E I Sbjct: 181 LNGISCIDIEHTPPTKKQIVSSRTFGQRITDIHDLKEAVIKRTQEAFTRARNEQVLVGCI 240 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 F ++PF +P+Y S PT D R ++ ATR +D ++++G ++KAGV+L Sbjct: 241 IVFAYSNPFDKTKPFYKKEQSSSFAVPTDDLRLLVQTATRLMDQVYKSGIEFKKAGVILT 300 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ-WQMKRAML 407 + +L D+ +EQLM ++ + G+ + F G + + W + Sbjct: 301 CLEPKHTYTYDLLTDHQDLEKTEQLMKAIEEVQQIFGKNKIGFGGSMFKNRIWNLTANYQ 360 Query: 408 SPRYTTRSSDLLRVK 422 + Y ++++K Sbjct: 361 TRNYF-SFDGMIKIK 374 >UniRef50_A6QA22 DNA polymerase IV n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QA22_SULNB Length = 422 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 83/444 (18%), Positives = 160/444 (36%), Gaps = 71/444 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 MF D+++F+AS E L G P+ V S + Sbjct: 1 MFLHIDIDSFFASAERTVDSSLKGIPMAVGSRSNLEIFNRKRTNIRLMNDNSGAFVTPVF 60 Query: 34 ----------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 G + + EA+A GVK P + L + V Sbjct: 61 YSDREKTFDSYFVDRVEGKEKIRGIITTASYEARAYGVKTAMPIAQALQLCPQM--VVVP 118 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 SNY Y S+++ + + + P+VE +SIDE F D++G ++ F +E++A +++R Sbjct: 119 SNYPRYHRFSHQIHAFMMKEMPKVEQFSIDEFFADVSGWIEDENVYAFAQELKAKMIERF 178 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 + V +GI++ K +AKLA +AK + + + +P+ GIGR Sbjct: 179 DIPVSIGISKAKWIAKLATESAKPFGVYEV--------KDIDAYIEDMPIKAFPGIGRGF 230 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 K+L+ IKT+ D+ + + + + + G C + E ++ I SR Sbjct: 231 QKRLEDRYIKTLGDVKR--NKSLFYSWKKPGIQLYHRVTGT-CNEGIESRGERKSIGISR 287 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 +F + D +++ I A + + + + + Sbjct: 288 TFD-PLYDPHEVKRRIMIMARHITYMVMAIEVNPTTFYLKVNYEYGIRAKKSETVNR--- 343 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 + + + + + G K + + +F L+L D N + Sbjct: 344 ----LFSEQLFKSELSTMFEEVMLPGKGAVKLTLNVSNFTMHHARTLSLLDLNDDI-SAH 398 Query: 372 QLMTVMDTLNAKEGRGTLYFAGQG 395 L + +L + G + A + Sbjct: 399 ALTCHIHSLREQFGLDIVKTADEL 422 >UniRef50_UPI00017B5397 UPI00017B5397 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B5397 Length = 711 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 68/397 (17%), Positives = 126/397 (31%), Gaps = 59/397 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P L P+ + ++ N A+ +GV K+ Sbjct: 39 IILHFDLDCFYAQVEMIRNPALREVPLGI--QQKYIIVTCNYVAREMGVTKLMSVANAKE 96 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV---------- 110 + +V + Y ++S +V L P VE DE F D+T + Sbjct: 97 KCPQLVLVKGE-DLTHYREVSYKVTELLMSYCPLVERLGFDENFMDVTEMVERRLAETSE 155 Query: 111 ----------------------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 + E+R + + LT GIA K LAKL Sbjct: 156 LDISFKGHVYGHVSAEVKATDHARLALGSHIAAELREAIHCKLGLTGCAGIATNKLLAKL 215 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSALP-VDDVWGIGRRISKKLDAMGIKTVLDLA 207 + K Q+ E ++ L + V G+G + +KKL +GI TV +L Sbjct: 216 VSGTFKPNQQ------TSLLPENISDIVGCLSSLRKVPGVGHQTAKKLQDLGIFTVKELQ 269 Query: 208 DTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAI 267 + + F +R + G + Q + SF + ++ + I Sbjct: 270 HFPVNHLVGEFGRTAQRLKSLVLGVDDSPVTPTGAP-QSLSDEDSFKK-MSSTKECLEKI 327 Query: 268 CSYAARAAE--KLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT--------- 316 E ++R +++ + I+ A N+ + S + Sbjct: 328 EELLRSLVERTRMRKDNRQPQTFRLTIRRYS-ATNKWFNRESRQAPIPNHVGQKITSGSK 386 Query: 317 -QDSRDIINAATRSLDAIWQAG--HRYQKAGVMLGDF 350 ++ A + + V + Sbjct: 387 EDAVAQLVPLAMKLFHKMVDTSAFFHLTLINVCFSNL 423 >UniRef50_Q2BYP9 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Photobacterium RepID=Q2BYP9_9GAMM Length = 426 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 105/432 (24%), Positives = 190/432 (43%), Gaps = 18/432 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 M L D FYA ++P L P++V + G IA N + +G+ P +++ D Sbjct: 1 MICLLDGTRFYAESCITYKPALRNTPLLVTTGQ-GISIAANRASTNIGISKFTPIWEEID 59 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCR-DLT 117 R + + +N+ ++ S+R M+ LE+ R YS+DE F D++ + DL Sbjct: 60 RLRVHKGIVYKANFNTFSHHSDRFMTALEKHIQDARSMRYSVDEVFYDVSHLYRINVDLN 119 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + + +R + + T + G G+ +T TLAK+A+ AAK + G L + + ++ Sbjct: 120 EHVQALRKAIYKETGVPTGAGVGKTLTLAKVASWAAK-NCQPYQGQCVLISEKETDTVLK 178 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 +PV +W IGR+++K L GI T L D + K +++ + + EL G CL + Sbjct: 179 QMPVGKLWNIGRQLNKHLTQEGILTAYQLKQCDTKTYHKRYSINVANVISELNGIACLDI 238 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 K++I + S+ +R+ + + + A K+R + + +S F+ TS + Sbjct: 239 SVEREKKKQIWSTASYRDRLHHRDDLFAELAHHCAEVMRKIRDQKSEMKTLSVFVCTSKY 298 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFSQG 354 P+Y + L D+ + D + A K GV Sbjct: 299 DRCPPFYRRG-ELTLENGLTDTSFALQQLRALFDDLIPNNLAKQPIYKVGVGAPSLIDAE 357 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS----PR 410 V Q LF+ + L +D L+ + G+G + FA Q Q+ + ++ + Sbjct: 358 VKQFELFNRFD---NKDTLNNTLDQLSDRFGKGVIGFACQ--QRSYHERQGEIEMLELEN 412 Query: 411 YTTRSSDLLRVK 422 Y T D++ VK Sbjct: 413 YYTDIKDIVVVK 424 >UniRef50_Q568P0 Zgc:110185 n=3 Tax=Clupeocephala RepID=Q568P0_DANRE Length = 710 Score = 215 bits (547), Expect = 3e-54, Method: Composition-based stats. Identities = 69/394 (17%), Positives = 124/394 (31%), Gaps = 54/394 (13%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P L KP+ + ++ N A+ LGV + Sbjct: 38 VILHFDLDCFYAQVEMIRNPALRTKPLGI--QQKYIIVTSNYVARELGVNKLMSVTDAVE 95 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--------- 111 + +V + Y +MS +V L P VE DE F D+T + Sbjct: 96 KCPQLVLVKGE-DLTHYREMSYKVTELLMSYCPLVERLGFDENFMDVTEMVEKRIKETRI 154 Query: 112 ----------------------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLA 149 + E+R + LT G+A K LAKL Sbjct: 155 SDLSFNGHVYNHESVVVDEENIRLAVGSVIAAEMRQAIFSTLGLTGCAGVASNKLLAKLV 214 Query: 150 NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT 209 + + K Q+ L + S + V GIG + +KL A+G+ V DL Sbjct: 215 SGSFKPNQQT-----TLLPHSNAELMSSLTGLIKVPGIGYKTREKLKALGLVNVRDLQLY 269 Query: 210 DIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAIC 268 + + K F +R G + P Q + SF + ++ + + I Sbjct: 270 PLSDLVKEFGEMNAKRVQNLACGIDDSPVTPAGPP-QSLSDEDSFKK-MSTLEEVLKKIE 327 Query: 269 SYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT-------QDSRD 321 E++ + + + I+ N + S + T Sbjct: 328 ELLINLTERMHKDGRQPHTLRLTIRKYTVT-NRWFNRESRQCPIPNHTGLKITGGSSEAV 386 Query: 322 --IINAATRSLDAIWQAGHR--YQKAGVMLGDFF 351 +++ + + + V + Sbjct: 387 PQLLSLSMKLFHKMVDPHQPFHLTLLNVCFSNLQ 420 >UniRef50_B7AW77 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B7AW77_9BACE Length = 519 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 88/508 (17%), Positives = 155/508 (30%), Gaps = 104/508 (20%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWF 56 ++ D+ +FYAS E R D +VV + +A + KA G+ F Sbjct: 5 IYIAIDLKSFYASVECRERGLDPLTTNLVVADASRTEKTICLAVSPSLKAYGIPGRARLF 64 Query: 57 KQKDLFRR-------------------------------CGVVCFSSNYELYADMSNRVM 85 + R G + LY + S R+ Sbjct: 65 EVVQKVREVNAMRRTAAGGHRLSESSSDAAVIAADPDVAVGYITAPPRMALYMEYSTRIY 124 Query: 86 STLEELSP--RVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQ 141 + + V +YSIDE F D + + ++ V ++T +T GI Sbjct: 125 NIYMKYVAPEDVHVYSIDEVFIDASPYLGTYGITARELASKMIRDVYEQTGITATAGIGT 184 Query: 142 TKTLAKLANHAAKKWQR---QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 L K+A K R + L ++KL + P+ D W +GR +KKL+ Sbjct: 185 NLYLCKIAMDIEAKHARPDEHGVRIAFLDEKAYRKKLWNHRPITDFWRVGRGYAKKLEEK 244 Query: 199 GIKTVLDLADTD---------IRFIRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQE 246 GI T+ D+A + K F V E + G Q++ + P Sbjct: 245 GICTMGDIARCSVGRPGDFYNEELLYKMFGVNAELLIDHAWGYEPCTMAQIKAYRPESNS 304 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS----------- 295 I + DY R + A + A L + + I Sbjct: 305 IGSGQVLHCP-YDYTGTRLVVREMADQLALDLAGKGLVTDQLVLTIGYDIDNLSNADIAR 363 Query: 296 --------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA---- 343 + L T SR +I++AT+ + I G ++ Sbjct: 364 NYHGEVTADRYGRRIPKPAHGTGNLPVCTSSSRILIDSATKLYERITNPGLLIRRINITA 423 Query: 344 ----------GVMLGDFFSQGVAQLNLFDDN----------------APRPGSEQLMTVM 377 G+ + ++ QL+LFD +++ + Sbjct: 424 NHVVPHSAEPGISAHNNTTEKYEQLSLFDTPGFDGYDERKKQEDKMQDIIEKDDRMQQAV 483 Query: 378 DTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 + + GR + + ++R Sbjct: 484 LDIKKRYGRNAILKGMNYEEGATTIQRN 511 >UniRef50_D0A851 DNA polymerase kappa, putative n=17 Tax=Trypanosoma brucei RepID=D0A851_TRYBG Length = 572 Score = 214 bits (545), Expect = 5e-54, Method: Composition-based stats. Identities = 71/372 (19%), Positives = 133/372 (35%), Gaps = 29/372 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ E P+ P+ + + + N A+ G++ G P F + Sbjct: 135 YIHLDMDMFYAAVEIKKHPEYATIPLAIGTMTR--LQTANYIARGRGIRQGMPGFLALKI 192 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL----T 117 ++ +++ Y + SN V + E P + +DE +++ + Sbjct: 193 CP--NLLILPPDFDAYNEESNTVRRIVAEYDPNYIVVGLDELALEVSAYIERFEGTKTAE 250 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D E+R V T LT GI T LAK+A++ K + ++L E + Sbjct: 251 DVASELRVRVFGETKLTASAGIGPTAALAKIASNINKPNGQH---DLNLHTREDVMTYVR 307 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L + V G+G+ L +GI T+ D+ + + N + + G Sbjct: 308 DLGLRSVPGVGKVTEALLKGLGITTLSDIYNRRVELCYILHNNLFRFLLGASIGIMQWPD 367 Query: 238 EEFAP-----------TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 A ++ I RS M++ + + A E++R CR Sbjct: 368 AATAANTENCEGATGEQRKAISSERSITTP-RTKEGMQEMVDTVFNGAYEEMRKSEIMCR 426 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 IS I+ + + + + L+ + DS + A + GV Sbjct: 427 RISLTIRWASYRYQQY------TKSLIQHSDDSATLRRAVDELMLPHAAKYSEMCLLGVR 480 Query: 347 LGDFFSQGVAQL 358 L D S + Sbjct: 481 LSDLISAKDFHM 492 >UniRef50_B4WAK0 ImpB/MucB/SamB family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WAK0_9CAUL Length = 433 Score = 214 bits (544), Expect = 7e-54, Method: Composition-based stats. Identities = 91/405 (22%), Positives = 156/405 (38%), Gaps = 24/405 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+NAF+AS E PD G+PV+V + IA + E+KA GV G + + Sbjct: 13 WLFVDLNAFFASVEQQMNPDWQGRPVIVRPAMSEYTGAIAASYESKAWGVHTGMRVSEAR 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 L G++ + +LY + ++M+ ++ P ++ SIDE C+L G + Sbjct: 73 KLCP--GLIVAEARPDLYVAVHKKIMAEIDRHVPVWKVGSIDECSCELLGPERQEANAVA 130 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 R I+A +L+ L +G+A ++ LAK A K + + + Sbjct: 131 LARRIQAGILENVGDCLRSSIGLAPSRFLAKTACGMKKPAG------LTILRANELPGPL 184 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCL 235 LP+ GIG R+ +L+A G+ L R R + ++ ER R L G Sbjct: 185 LDLPLSKYPGIGPRMRLRLEAAGVADTAGLWTMSARQARAVWNSIEGERIWRGLHGLDSE 244 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 E P I S + + R + +LR ++ + Sbjct: 245 PTPEKPPA--SISHSHVLAQAMRTPDKARALARRLVVKCGARLRRMGLTGASLTLHLDMG 302 Query: 296 PFALNEPYYGNSASVKLLT---PTQDSRDIINAATRSLDAIWQAGHRYQK--AGVMLGDF 350 P A + + PTQD+ ++ A + + GV + Sbjct: 303 PKATPRSDRRGWETAAMSCPVAPTQDTFALLTALDVLWRKVEPELEAGRLSYVGVGVHGL 362 Query: 351 FSQGVAQLNLFD---DNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 S+ + +LFD D S +L +D LN + G+ T+ Sbjct: 363 KSRDAFETDLFDTGPDQGGEAPSLRLSQALDALNRRYGKDTVSIG 407 >UniRef50_A3ZXX8 ImpB/MucB/SamB family protein n=2 Tax=Planctomycetaceae RepID=A3ZXX8_9PLAN Length = 407 Score = 213 bits (543), Expect = 8e-54, Method: Composition-based stats. Identities = 79/404 (19%), Positives = 155/404 (38%), Gaps = 28/404 (6%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFR 63 D+N+++AS E RP+L +PV V+ + C+IA + +AK GVK+G + + L Sbjct: 10 DMNSYFASVEQQLRPELRKQPVGVVPLDTDSTCIIAASYDAKRSGVKVGTKVYDARRLCP 69 Query: 64 RCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDFGRE 122 ++ + ++Y M +R+++++E+ +P IYSIDE L G Sbjct: 70 GIQLI--KARPDVYVRMHHRLLASVEKCAPIERIYSIDEWTIRLLGADRQLEQARRLAYR 127 Query: 123 IRATVLQRTHL--TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 I+ V L + +GIA T+ LAK+A K + E + + LP Sbjct: 128 IKRHVAHEIGLWMSCSIGIAATRLLAKIAAGLEKPHG------LTALPQEALPERIEHLP 181 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 + + G+ I ++L G+ + +L + + + + + + R L G + Sbjct: 182 LTKLNGVNVGIERRLHQHGVTNIRELWNLNRDEMTRAWGSISGSRWWAGLHGVDEPEPPT 241 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 +Q + + + + A++LR Y + +K Sbjct: 242 R---RQSMSHGNVLDPQFRTADGAHCILVKLICKLAQRLRRSGYYANVLQLSLKDVRG-- 296 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 G + + QD+ ++ + + + K V + D + Sbjct: 297 -----GRFETKTPIPCLQDTPSLLLQFEKLWKSRPLSNTPLLKVDVCVSDLRLASQVTRS 351 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 LF++ L V+D + + G L+F Q M+ Sbjct: 352 LFEELEQPCK---LSAVLDEITDRWGPSALFFGSIHRYQ-HAME 391 >UniRef50_Q5QZ82 DinP n=2 Tax=Idiomarina RepID=Q5QZ82_IDILO Length = 356 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 66/365 (18%), Positives = 137/365 (37%), Gaps = 25/365 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQKD 60 AL D++AF+AS E + P L +P V + V+A N A+ GVK P + Sbjct: 8 IALLDLDAFFASAEELRDPSLKTRPFAVGGGGERGVVATANYLARQFGVKSAMPGSHARR 67 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + + + Y ++S++V+ L EL+PR+E SIDE + DLT + + Sbjct: 68 LCPQ--LTFIRPDGNYYRELSDKVLDILRELTPRIEPASIDEFYLDLTHLEGFKGSATLA 125 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 + ++ +T GI+ K +AK+A+ K + + ++AL Sbjct: 126 MDFVREQIKTLGITGSAGISNQKMVAKIASEERKPDGQF------VVRPAEVMDYIAALN 179 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEE 239 + + G+G + + L G+ T D+ + +++ ++ G ++ Sbjct: 180 LKQIPGVGPKSQQVLTNYGLTTGKDIQNIELQQLQAILGDKAGYVLFERCHGRDRREVVT 239 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAIC-SYAARAAEKLRSEHQY---CRFISTFIKTS 295 ++ + ++ + + + + + + ++++ H R + +K S Sbjct: 240 E-RIRKSVGVEQTLATDMRLESTAQAYVQDNLLPKLRQRMKITHWREQPIRSQTLKLKFS 298 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 F S S + + + G + G+ Sbjct: 299 DFT----QTTVSRSAQFI----SPSLFYQLLDEAWQR--GKGKGVRLLGISATLPDPNEQ 348 Query: 356 AQLNL 360 QL L Sbjct: 349 LQLEL 353 >UniRef50_B5X367 DNA polymerase iota n=1 Tax=Salmo salar RepID=B5X367_SALSA Length = 757 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 75/470 (15%), Positives = 147/470 (31%), Gaps = 68/470 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P L P+ + ++ N A+ LGV K+ Sbjct: 46 VILHFDLDCFYAQVEMIRNPALRNVPLGI--QQKYIIVTCNYVARDLGVTKLMLVTDAKE 103 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-------- 112 + +V + Y + S +V L P VE DE F D+T + Sbjct: 104 KCPQLVLVKGE-DLTHYRETSYKVTELLMSFCPLVERLGFDENFMDITEMVERRMEQTPE 162 Query: 113 -------------------------CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + E+RA + + LT GIA +K LAK Sbjct: 163 SAHYSYEGHVYSLDTSDAKVMVHPLLAVGSHIAAELRAEIHSKLGLTGCAGIATSKLLAK 222 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALP-VDDVWGIGRRISKKLDAMGIKTVLDL 206 L K Q+ E + +M +L + V G+G + +K+L A+G+ V DL Sbjct: 223 LVAGTFKPNQQ------TTLLPESVKDIMGSLNGLRKVPGVGHQTAKRLQALGLVGVQDL 276 Query: 207 ADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + + + F V +R G + Q + SF + ++ + Q Sbjct: 277 QLFPLADLVREFGVSTAQRLQNLALGIDDTPVTPTGAP-QSLSDEDSFKK-MSSTNEVWQ 334 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP---------T 316 + + +++ + + + I+ A N+ + S + Sbjct: 335 KVKDLLSSLLDRMHKDGRQPFTLRLTIRRYS-ATNKWFSRESRQCPIPNHIGQKITSGSC 393 Query: 317 QDSRDIINAATRSLDAIWQAG--HRYQKAGVMLGDFFSQGVA----QLNLFDDNAPRPGS 370 ++ A + + V + ++ A + F + + Sbjct: 394 DALAQLVTMAMKLFHKMVATNTAFHLTLLNVCFSNLQAKCAAVSKGSIASFFTHRSPEKT 453 Query: 371 EQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRS-SDLL 419 + D + G + L+ + + D+ Sbjct: 454 QASSRCQDLSQSVLGNLRGQAGSDVEGKT-----EELTGQDASHWIPDIP 498 >UniRef50_C5SGU5 DNA-directed DNA polymerase n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SGU5_9CAUL Length = 425 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 88/402 (21%), Positives = 151/402 (37%), Gaps = 30/402 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D+N+F+ASCE P L G+P++V + + C IA + EAK LG+K G K Sbjct: 17 WLYLDMNSFFASCEQQADPCLRGRPLIVVPVDSEYTCAIAASQEAKRLGIKTGTQVKIAK 76 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 + VV + Y + +R++ ++ + P +I SIDE C L G Sbjct: 77 QICPDLKVVQARPD--EYVRIHHRILEEVDHVIPVEKICSIDEVACRLMGPETVEAAARA 134 Query: 119 FGREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 G I+ +L LT +G+A ++ LAK A K + ++ + Sbjct: 135 LGHRIQRRILSNIGECLTASIGLAPSRMLAKTAADMQKPLGM------TVLRRDQLPGPL 188 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCL 235 + + D GIG +L GI L +R+ + + ++ LRG Sbjct: 189 LDIDIGDFPGIGPATKARLFRAGISDPRQLWHLSPSRMRQLWGGIGGDQFWYALRGVDPP 248 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++E + I S + + R A+ +LR C + I+ Sbjct: 249 EIET---ERGSISHSHVLAVELRPVEAARAVARRLTAKCGSRLRRMGYKCGGLHLSIR-- 303 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQ 353 G + + +L T DS ++ AA D + +K V Sbjct: 304 -----GTQEGRAQAERLFMATADSFRMLEAADALWDVCVRTLNQTSIKKVSVTCMRLVPA 358 Query: 354 GVAQLNLFD---DNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 A +LF P +L+ +D LN + G+ + Sbjct: 359 DTA-PDLFGYSPAADEDPRHMRLLEAIDALNQRFGKDRISIG 399 >UniRef50_D0L509 DNA-directed DNA polymerase n=2 Tax=Corynebacterineae RepID=D0L509_GORB4 Length = 371 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 85/368 (23%), Positives = 131/368 (35%), Gaps = 24/368 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNN-----DGCVIARNAEAKALGVKMGDPWFK 57 D++ F S E + P+L PV+V N V + EA+ +GV G P Sbjct: 13 LHVDLDQFQVSVERLRSPELVDVPVIVGGNGDPTEARKVVTCASYEARDVGVHAGMPLRA 72 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL- 116 V + Y S VM L VE++ DEA+ + + Sbjct: 73 AYRKLPD--AVYLPLDMGAYDAASAEVMDVLRAHGHPVEVWGWDEAYLGVGPAGSEIAAP 130 Query: 117 -----TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ---RQTGGVVDLSN 168 TD +R + R LT VGI+ K AK+A AK+ G V L + Sbjct: 131 DDAAITDLAIRLREDIRARCGLTSCVGISDNKQRAKMATGFAKRPPEPDPTGGSKVFLLD 190 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVR 227 LM P D+W +G + + KL GI+TV DL + F Sbjct: 191 GRNWLDLMGDRPTRDLWSVGPKTAAKLSGAGIETVRDLIAAPRDDLIAIFGPHQGNWLYV 250 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 RG + + SR+F + + D+ R A+ S +++ E + Sbjct: 251 LCRGGGDATITAEPWLARSHSKSRTFPQDLVDFDEKRSAVGSLLRELLDQVIVEERLPFR 310 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 ++ ++T+ F Y + S KL PT + T L A + GV L Sbjct: 311 VAVTVRTATF------YTRTKSRKLREPTTSFDVLEPEVTGLLAKF-DADRPVRLLGVRL 363 Query: 348 GDFFSQGV 355 + Sbjct: 364 DLVTEEEQ 371 >UniRef50_C4Q7Z3 Terminal deoxycytidyl transferase rev1, putative n=1 Tax=Schistosoma mansoni RepID=C4Q7Z3_SCHMA Length = 1001 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 71/452 (15%), Positives = 145/452 (32%), Gaps = 95/452 (21%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------VIARNA 42 + D++ F+ S RP+L KP+ + V + + Sbjct: 363 IIFHIDMDCFFVSVSLRNRPELEDKPIAITHAKSSRGSVNDIRSSNKHAESMSEVASCSY 422 Query: 43 EAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE 102 A+ GVK G + K L ++ ++E Y +S + ST+ + ++ S DE Sbjct: 423 TARHAGVKNGMLLGRAKQLCPD--LIVLPYDFEAYKAVSELLYSTISRFTRDIQAVSCDE 480 Query: 103 AFCDLTGVR---------------------NCRDLTDFGREIRATVLQRT-HLTVGVGIA 140 + D T + + G IR V T T +G Sbjct: 481 LYADCTELLIYSNENEIKPKLHDSNWEATYQIINPLILGGYIRELVRDITGGCTASIGFG 540 Query: 141 QTKTLAKLANHAAKKWQRQT-----GGVVDLSNL-------------------------- 169 +K LA+LA AK + GG + Sbjct: 541 TSKLLARLATKKAKPNGQYWLLGRSGGACPKLDRQTKNESWRWYSSDENIEQLETHSECE 600 Query: 170 --ERQRKLMSALPVDDVWGIGRRISKK-LDAMGIKTVLDL-ADTDIRFIRKHFN-VVLER 224 + + + LP+ ++ IGR ++ K A KT L + I R Sbjct: 601 LTGDEYQWLCNLPLTEIPNIGRSLAGKIFQAFDAKTCGQLMSKVSHNQITSLLGKKTGNR 660 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR----- 279 RG+ L+ F + + S ++G R++ + + S + ++R Sbjct: 661 VYMACRGKDLDSLQ-FEKEYKSVSASMNYGIRLSSRSELEALVQSLCEELSSRMRNIKMS 719 Query: 280 --SEHQYCRFISTFI---------KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 +E + ++ + +TS + + + ++++ T D+ + A + Sbjct: 720 SMNEGCVGKSLTIKLYLRLPNAPVQTSKYMGHGLCSITNHTIQMTEHTADATVLYRYAVK 779 Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 ++ + + G+ + G + Sbjct: 780 TVYRLCPEPEDLRGIGLQVHQLQQGGSRVNGM 811 >UniRef50_B6K5D4 DNA polymerase IV n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K5D4_SCHJY Length = 1006 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 74/382 (19%), Positives = 127/382 (33%), Gaps = 23/382 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQKDL 61 D + F+AS T RP+L G+PV V + + N A+ GVK G + Sbjct: 342 FHVDFDCFFASVLTRDRPELQGRPVAVAHGTKNSEIASCNYAARDFGVKNGMFVNTARSK 401 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-VEIYSIDEAFCDLTG-VRNCRDLTDF 119 +V +++ + ++ L + +++ S+DEA D+T N + Sbjct: 402 CPELELV--DYDFDAFESVARTFYQILSHIQHTAIKVVSVDEAVLDMTDIFTNDDEAIKT 459 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 I+ +VL++T TV VGI LA+LA AK L N + L Sbjct: 460 AESIQTSVLEQTRCTVSVGIGPNLLLARLALRKAKPRGIY------LLNEAVAGDYLKTL 513 Query: 180 PVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQL 237 V ++ G+G +K L +KTV DL + K F RG L Sbjct: 514 TVRELPGVGWAQEQKLLLRYKVKTVSDLRSISRESLMKDFGASFGAHLYSIARGHDETLL 573 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI----- 292 +E + I ++G R + + ++R H + + + Sbjct: 574 KE-DMIRSSISVDVNWGVRFIFKQDVVDFLGRLCEELVSRMRDCHSRLQQLQLRVLKRAK 632 Query: 293 ----KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 +T + + S PT D+ + A + G+ Sbjct: 633 HASFETLKYLGCGEVDTLTKSAFFNEPTDDTALLTKKCVVLFHACSIDAGEIRGIGLQAL 692 Query: 349 DFFSQGVAQLNLFDDNAPRPGS 370 G + Sbjct: 693 KLSDSGTSSKQSLLKLPLLNKR 714 >UniRef50_B9DUB9 ImpB/mucB/samB family n=26 Tax=root RepID=B9DUB9_STRU0 Length = 475 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 82/452 (18%), Positives = 162/452 (35%), Gaps = 53/452 (11%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVV---LSNNDGCVIARNAEAKA----------- 46 A D+ +FYAS E + R + V N++G ++A + K Sbjct: 14 IAFVDMKSFYASIECIDRGLSPLRTSLCVMSRADNSNGLILASSPTFKRVFGKSNVGRSY 73 Query: 47 ---LGVKMGDPWFKQKDLFR--------------RCGVVCFSSNYELYADMSNRVMSTLE 89 + ++ + S + Y + + ++ Sbjct: 74 DLPFNIHTRRFNYRVAQREGWKVTTDFVNYIESWAKHTLIVSPRMDRYIEKNLQIQHIFH 133 Query: 90 ELSP--RVEIYSIDEAFCDLTGVRNCRDLT----------DFGREIRATVLQRTHLTVGV 137 E + + YSIDE+F DL+ N + I+ + + T + V Sbjct: 134 EFASPQDILTYSIDESFLDLSSSINYFIPSNELTRKEKLDALADRIQYRIWKETGIISTV 193 Query: 138 GIA-QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 G++ LAKLA K+ + + S + + K+ + D WGIG R++K+L Sbjct: 194 GLSNSNPLLAKLALDNDAKYAEKMR--ANWSYEDVEEKVWQIKQLTDFWGIGSRMAKRLQ 251 Query: 197 AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE-EFAPTKQEIICSRSFGE 255 +GI T+ LA+++ ++K ++ + G + + P + I S+ Sbjct: 252 KLGIFTIKTLANSNPDLLKKELGIIGLQLWFHANGVDESNVHQPYIPKARGIGNSQILPR 311 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 + + A A +LR + + ++ F+ S +P + P Sbjct: 312 DYILQSDIELVLKEMAEHVARRLRRKQKKATTVALFVGYSKGQSGKPINAQMK----IDP 367 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 ++ I ++ GH ++ GV Q + +LFDD + QL Sbjct: 368 ASSNKIISQTVIMLFRKHYK-GHIVRQIGVRCDGLVDQSLEVFSLFDDYEQKEKENQLEA 426 Query: 376 VMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 +DT+ + G +L A ++ +R+ L Sbjct: 427 TIDTIRDQFGVLSLQKASSLLEASRVAERSQL 458 >UniRef50_Q0IJ37 DNA polymerase iota n=5 Tax=Eukaryota RepID=Q0IJ37_XENTR Length = 742 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 78/396 (19%), Positives = 134/396 (33%), Gaps = 58/396 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P+L KP+ + V+ N EA+ GV ++ Sbjct: 51 VIVHIDMDCFYAQVEMIRNPELRNKPLGI--QQKYIVVTCNYEARKFGVTKLMLIKDARE 108 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--------- 111 + +V + Y +MS R LEE SP+VE DE + D+T + Sbjct: 109 KCPQLVLVSGE-DLTPYREMSYRATELLEEFSPQVERLGFDENYIDVTELVDKKLQEERG 167 Query: 112 -------------------------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 + EIRA + R LT G A K LA Sbjct: 168 NGRNPGVCGHVYSDQKMNVNDWAHVRIAAGSHIASEIRAALYNRLGLTGCAGTASNKLLA 227 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP-VDDVWGIGRRISKKLDAMGIKTVLD 205 KL + K Q+ E L+++L V + GIG + SK+L+++G+ + D Sbjct: 228 KLVSGTHKPNQQ------TALLHESHSHLINSLDHVKRIPGIGYKTSKRLESLGLSRISD 281 Query: 206 LADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 L I + K F R RGE + P Q I SF + + ++ Sbjct: 282 LQACPITLLEKEFGSSVAHRIQMLSRGEDDSAVVPSGPP-QSISDEDSFKK-CSTVSEVK 339 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP--------T 316 + ++ + + + I+ N+ + S + Sbjct: 340 IKMEERLRNLLVRISKDGRIPHTLRLTIRQFS-PSNKWFNRESRQCPIPAHISQNIGAEC 398 Query: 317 QDSRDIINAATRSLDAI--WQAGHRYQKAGVMLGDF 350 Q ++ R + + + V + Sbjct: 399 QAVPALMELLMRLFEKMIDVKMQFHLTLLNVCFSNL 434 >UniRef50_C1E418 Predicted protein (Fragment) n=2 Tax=Micromonas RepID=C1E418_9CHLO Length = 410 Score = 211 bits (536), Expect = 5e-53, Method: Composition-based stats. Identities = 75/346 (21%), Positives = 136/346 (39%), Gaps = 20/346 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++AF+A+C T+ RP+L P+ V + N A+ GV+ P F L Sbjct: 83 WIHVDMDAFFAACHTLERPELASVPMAVGGM--SMISTANYVARKAGVRSAMPGFVAVKL 140 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDF 119 +V ++ELY + + + S+DEA+ D+T + D + Sbjct: 141 CP--ALVFVRQDFELYQKYAAMLREVWRVYDKEFDCGSLDEAYLDVTEFMSRTGMDGGEV 198 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 ++R+ V +T LT G+A T+ LAK+ + K + + E +S L Sbjct: 199 AAKLRSDVETKTRLTCSAGVAPTRRLAKICSDWNKPNGQFVLER----SREAVISFLSDL 254 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV V G+G+ + KL A I+T L + ++ G + Sbjct: 255 PVRKVGGVGKVLEGKLSAFQIRTCGQLRQSLNVIAAVFTPATIDFLFSVALGTG-TEQRP 313 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + R+F +D + + A A++L+ E+ + ++ IK S F + Sbjct: 314 PDAQRKGLGHERTFA-PTSDPRFIEAKLHGLAEDVAKELQKENLKAQTVTLKIKKSNFEV 372 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 + +S ++ I AA L G + GV Sbjct: 373 MQRQLTVPSS-------NAAKVIAEAAILLLRKERPYGA-LRLVGV 410 >UniRef50_B9L8S0 DNA-directed DNA polymerase n=1 Tax=Nautilia profundicola AmH RepID=B9L8S0_NAUPA Length = 412 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 85/436 (19%), Positives = 154/436 (35%), Gaps = 68/436 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL------------------------------ 30 M D+++F+ S + L KPVVV+ Sbjct: 1 MKIHLDLDSFFVSAHRIEDKTLLNKPVVVVKRNDKEIFKNEKTKLLNLNEGAFTGDLIVG 60 Query: 31 ------------SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA 78 G V+ + EA+ LG+K G + ++ + + NY+LY Sbjct: 61 DEKYDKSYFLENGKVRGIVVTASYEARELGIKTGTTLAEALRIYP--KLTVLTPNYKLYH 118 Query: 79 DMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVG 138 +S ++ LE+ P VE YSIDE F DL G N ++ F + ++ + +R +L V +G Sbjct: 119 ILSYKLKLFLEKKIPLVEQYSIDEFFGDLEGWVNDGEIYGFIKTLKDEIWKRFNLPVSIG 178 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 A++K AKLA AK + + + + +PV+ GIG+RI K++ Sbjct: 179 AAKSKWTAKLATSFAKPDGIKVV--------KNIDEFIENIPVEKFPGIGKRIEKRIKEK 230 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 GI T+ D+ + + + + G ++ ++ I SR F + Sbjct: 231 GILTLGDVKR--EKEYFYSWGKAGVQLYNRVCGTDNEKVI-QKSERKSIGISRRFD-PVY 286 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 D + + I + ++ + F IK ++ + + Sbjct: 287 DRKEIIRRIGILCRYLSFLVKKKKVNPTFYYLSIKYKHSKKSKAHITLDR-------IFN 339 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 + G+ + F NLFD E+L + Sbjct: 340 EMLLKEVMVTLFYRADIEDDYIISLGISVSKFKKVS----NLFD-LEEDRKMEKLNDAIY 394 Query: 379 TLNAKEGRGTLYFAGQ 394 L ++ G L A + Sbjct: 395 KLRSRYGLSALISASE 410 >UniRef50_B9WGP7 DNA repair protein, putative (Deoxycytidyl transferase, putative) n=3 Tax=Candida RepID=B9WGP7_CANDC Length = 1119 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 69/390 (17%), Positives = 130/390 (33%), Gaps = 41/390 (10%) Query: 1 MFALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFK 57 + D + F+A+ + RPDL +P+ V IA N A+ GVK G + + Sbjct: 397 VIMHIDFDCFFATASCLKRPDLDMNKQPIAVSHGGKTSDIASCNYVARKHGVKNGMWFIQ 456 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCRD 115 L ++ +E Y S + L + + SIDE D T + Sbjct: 457 ATKLCPD--LILLPYEFESYEKFSTEFYNYLFTSKFFDSIFPVSIDEVLVDATSYCHSGV 514 Query: 116 LT------DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + IR V + T+ V +G + LAKLA AK + Sbjct: 515 GDSVSLVNELATRIRKDVFRLTNCPVSIGASTNVLLAKLALKKAKPNGQFYLF------- 567 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT----VLDLADTDIRFIRKHFN-VVLER 224 + K + ++ + D+ G GR I +KLD+ +++ + D+ + + + + Sbjct: 568 DDTEKFLQSIYIKDLPGFGRGILEKLDSE-VQSSKPRIKDVISIPKQRLVQLLGEKTGTK 626 Query: 225 TVRELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 RG +E E ++ + +FG R + + + + ++L Sbjct: 627 LFEYARGIDQTSIEIDANNPEAVLGRKSVSVDVNFGIRFDTVEELDEFLMRLSRELYQRL 686 Query: 279 RSEHQYCRFISTFI---------KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 S ++ + F + S KL PT D I N Sbjct: 687 VSLGICGSSLTLKLAKRAEGARVNPPKFLGMGLCDFVNKSSKLGVPTNDWGIIGNEVKVL 746 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + + + + + Sbjct: 747 YRMVNIPVKELRGIAITISKLVDAESVKSS 776 >UniRef50_C3DVJ9 DNA-damage repair protein n=5 Tax=Bacillus RepID=C3DVJ9_BACTS Length = 393 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 74/412 (17%), Positives = 143/412 (34%), Gaps = 63/412 (15%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D+ +F+AS V Sbjct: 33 IFCLDLVSFFASVSCVKLG----------------------------------------- 51 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR--DLT 117 + + Y SN + + + P YSIDE F + + + Sbjct: 52 --------YDPQMDTYIRCSNYIAKIILQYVPPEYYFQYSIDECFIQVDNIFSLFADSPR 103 Query: 118 DFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 DF +++ + ++T ++ VGI + +AK+A + K + + + K+ Sbjct: 104 DFALKLQQEIYRKTKGISAAVGIGKNMIMAKVALDISAKNSPDL--IAEWDYNDVPTKIW 161 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 S P+ WGI + KL+ GI T+ DLA +++++K F V+ G + Sbjct: 162 SIRPLSSFWGISAKTEAKLNRKGIHTIGDLAHYPLKYLQKEFGVIGTDLHLHSHGIDFSR 221 Query: 237 L-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + + + P I S+ + + ++R +H+ R + + S Sbjct: 222 ITDTYKPKSTSIGKSQILMRD-YKIEEIPVILLEQIEEVCYRMRMKHKLARTVQFSVGYS 280 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 G SV PT + DI + + L + G + + L + ++GV Sbjct: 281 R----SYGGGFRKSVTFERPTCMTMDIYHICLKYLMELH-TGEPIRSISISLTNLVNEGV 335 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 Q+++FDD R +L +D + + G+ ++ A Q R L Sbjct: 336 EQISIFDDIKKREQQIKLTRALDEIRTRFGKNSILRAVSYTPQSTVRYRNTL 387 >UniRef50_D1J7R2 DNA-damage repair protein MucB n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J7R2_MYCHP Length = 418 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 86/401 (21%), Positives = 167/401 (41%), Gaps = 21/401 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 + D+++F+ SCE +L KPVV+ + A + E K LG ++G + Sbjct: 4 IIFHIDMDSFFVSCERSINTNLIDKPVVIAKRYKRSIISAMSYEVKNLGYRVGSSLYTVL 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLE-ELSPRVEIYSIDEAFCDLTGVR-NCRDLT 117 + +V +Y+LY+ +S ++ L+ + ++EIYSIDE + D + N + Sbjct: 64 EKVPNLLIV--EPHYDLYSLISKKIFDYLKNKYCTQLEIYSIDECYIDFSNTVSNWEEAK 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + ++I+ +L+ + +GI+ TK LAK++ + AK ++ E + Sbjct: 122 NLAQQIKDDILKTFMIPCSIGISFTKFLAKMSTNKAKPSGI------LITKKEDIERNFY 175 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR-FIRKHFNVVLERTVRELRGEPCLQ 236 +LPV+ ++G+G+ IS++L I T DL + + F+RK F + +L+G Sbjct: 176 SLPVEKIFGVGKNISQQLIKNKISTYKDLLECNNEIFLRKLFKKNFFLFIEQLKGINATD 235 Query: 237 LEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + I + +F E D ++ + A A + + + CR + I+ Sbjct: 236 HI-LNLETKGISNTITFMEKDSDDIVFLKNELFKLARNVANRAVNNNYECRCVEVLIRKQ 294 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 S K+ T D I A + +W + G+ + D S Sbjct: 295 D------KKWMSEQKKIDFFTNDIDIIFKIALKLFLNLWNEKECLRGLGIRICDLRSIFQ 348 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 + D + ++++ +NAK L Q + Sbjct: 349 ENKQI-DLFEDNNQKSIVNSILNEVNAKFEGKILITGKQYL 388 >UniRef50_D2JWS9 Putative DNA-directed polymerase kappa n=1 Tax=Filobasidiella depauperata RepID=D2JWS9_9TREE Length = 570 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 67/350 (19%), Positives = 121/350 (34%), Gaps = 55/350 (15%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYAS E P L K V G + + EA+ GV+ G F K L Sbjct: 101 IIHVDMDAFYASVEVQRDPSLKNKAFGVG---RGVLTTASYEARKFGVRSGMAGFIAKKL 157 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 ++ ++++LY S V LE+ + + S+DE + Sbjct: 158 CP--NIILTDTHFDLYIAASKSVREILEQYDENLMMASLDEGYLK--------------- 200 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKL---ANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +R V + T++T+ GIA + LAK+ + K + + + M Sbjct: 201 HLRNQVEKETNMTISAGIAPNRMLAKMGKICSDKNKPNGQYEMNF----ERSKIVRFMRD 256 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LPV + G GR + L+++G+K+ D+ D + + + R G + Sbjct: 257 LPVRKIPGFGRVTERYLESLGVKSCGDIYDKRAELLVMNHWLGFRGLCRTYLGIADNNVT 316 Query: 239 EFAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 ++ + R+F + D + + S L + +S F+ Sbjct: 317 PRKREERKSVGVERTFRNKTND-EDIMNTLSSIVDELERDLERLRTRAKSVSKFV----- 370 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 ++DI+ A L + G L Sbjct: 371 -------------------SSAKDILPIAQDLLQRELPLC--IRLLGFFL 399 >UniRef50_B7GAF1 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7GAF1_PHATR Length = 1125 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 76/426 (17%), Positives = 142/426 (33%), Gaps = 69/426 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND------------------GCVIARNAE 43 D++ F+AS P+ KPV + N N E Sbjct: 450 VMHVDMDCFFASVVLRKFPEYRDKPVAISHNGQSDDSSRTNGVLQVSKDSTSECATCNYE 509 Query: 44 AKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR----VEIYS 99 A+ G+K G + K L +V +++ Y +++ +V L E + R VE S Sbjct: 510 ARKYGIKKGMYLGRAKILCPE--LVVLQYDFDGYEEVAEQVTDILFEHASRFDGTVEQVS 567 Query: 100 IDEAFCDL-----TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 DE++ +L V IR + + T T VG+++ K LAKLA K Sbjct: 568 CDESYIELFLSDDPTVTAQEQAASLAEMIRQQIWEATQCTATVGVSKNKLLAKLATDKVK 627 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR-- 212 + E R+L+ L + + GIG R +KL + T+ D+ + Sbjct: 628 PNRSHLV--------ESHRELLQDLELRCLHGIGYRTDRKLAGEELVTIQDVWNLGDHAE 679 Query: 213 -FIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSR----------------SFG 254 + + ++ GE ++ A ++ I ++G Sbjct: 680 SELSRILGPGLGKKIFGFCNGEDDRPVQ--AAERKTIGAENRYSLVCSTYPFFVYKCNYG 737 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK--------TSPFALNEPYYGN 306 R + I A ++++ + ++ IK F + + Sbjct: 738 VRFDGPYGVDYMIDGLAKEVSKRMENVGTKGIRVTLKIKQKKAAAPPPPKFLGHGSCHNL 797 Query: 307 SASV--KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 S S+ + PT++ +I + + + G++L L + D N Sbjct: 798 SKSIDTRNSVPTREWAEISHLCQAMFVELQVDLEDVRGMGIVLSKLTPDMGTALKMPDSN 857 Query: 365 APRPGS 370 Sbjct: 858 QCMRKW 863 >UniRef50_UPI0000D5778B PREDICTED: similar to DNA polymerase eta n=1 Tax=Tribolium castaneum RepID=UPI0000D5778B Length = 679 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 79/435 (18%), Positives = 140/435 (32%), Gaps = 68/435 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY E P L GKP+ V+ G +IA N A+ GV F+ Sbjct: 7 VVVLVDMDCFYCQVEEKLNPALEGKPIAVVQYNAWQGGGIIAVNYPARDEGVTRHMRGFE 66 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-- 110 K +V ++ Y D RV L +P ++ S+DEA+ D+T + Sbjct: 67 AKKKCPSINLVQVPELRGKADLTKYRDAGKRVADVLLTFTPLLQRASVDEAYLDITEIVE 126 Query: 111 ----------------------RNCRDLTDFG--------------------REIRATVL 128 D EIR V Sbjct: 127 KRIEKGLDDLTLINLSNTFVVGCELEDFLHNAITNKEYSIPNLKLAVGGLVTEEIRREVF 186 Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG 188 + T GIA K LAKL K ++ + E K P++ V +G Sbjct: 187 KVTGYKCSAGIAHNKILAKLVCSLHKPNKQ------TILPQEEVEKFFETTPINKVKNLG 240 Query: 189 RRISKKL-DAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQE 246 + + L + + T+ LA + + + + RG + + Sbjct: 241 GKFGQTLSEDFHVTTMGQLAKIPEKLLVQKYDEKTGNWLHNIARGIDMEPVTT-KLIAKS 299 Query: 247 IICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 I C ++F + +++ + AA +E+L + + + I FA Sbjct: 300 IACCKNFPGKTALVTEENVQHWLGKLAAEMSERLDKDLKENNRRAKQII-VSFAQEVNKK 358 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAG---HRYQKAGVMLGDFFS-QGVAQLNL 360 ++ + + + I AA + + + + G+ F + V Q+ Sbjct: 359 DVHSTRTHPLVSYNEQKIAQAAFEVVKRFCRKSDGTYHLKFLGLNASSFDDIKNVRQITS 418 Query: 361 FDDNAPRPGSEQLMT 375 F P + L Sbjct: 419 FFQVGPNQPKKSLEK 433 >UniRef50_B3RQD9 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RQD9_TRIAD Length = 1014 Score = 207 bits (526), Expect = 7e-52, Method: Composition-based stats. Identities = 55/330 (16%), Positives = 111/330 (33%), Gaps = 35/330 (10%) Query: 29 VLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTL 88 V + + + N A+ G+ G + L VV ++ Y ++S + +TL Sbjct: 390 VEQFSTSEIASCNYVARRYGLHNGMFMGRALQLCPHLRVV--PYEFDKYKEVSKLLYNTL 447 Query: 89 EELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + + S DEA+ D+T + + D IR + +T T GI +A+ Sbjct: 448 ASYTFEIMAISCDEAYIDVTDILQDDYTIQDLASSIRHDIESKTGCTCSAGIGPNLLIAR 507 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 +A AK + + ++ + D+ G+G R+ +KL + ++T DL Sbjct: 508 MATRIAKPNGQHY------VDPANVLTFVANQSLKDLPGVGYRLHRKLKDLNVETCQDLR 561 Query: 208 DTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + +++ F + RG ++ ++ + ++G R M+ Sbjct: 562 KISLPVLQRDFGTKTGLMLYQYCRGIDERPVQ-VDHERKSVSAEINYGIRF---AEMKH- 616 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 R IK + + + S L PT DS I Sbjct: 617 -------------------RSPDASIKPWKYLGHGKCDNYAKSTTLTRPTCDSDIISKEC 657 Query: 327 TRSLDAIW-QAGHRYQKAGVMLGDFFSQGV 355 + + + G+ + Sbjct: 658 MKLFYSFASINVQDVRGMGIQIQRLSPIDE 687 Score = 57.5 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 19/47 (40%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKAL 47 + D+++F+ S R DL G PV V + A A L Sbjct: 293 VVMHLDMDSFFVSVAIRDRADLRGLPVAVTHSKGKIKPANLQNADKL 339 >UniRef50_A8PB46 ImpB/MucB/SamB family protein n=1 Tax=Brugia malayi RepID=A8PB46_BRUMA Length = 500 Score = 207 bits (526), Expect = 8e-52, Method: Composition-based stats. Identities = 72/369 (19%), Positives = 137/369 (37%), Gaps = 43/369 (11%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS-----NNDGCVIARNAEAKALGVKMGDPW 55 + AL D++ FY E +P L+GKPV V+ N G ++A + EA+ G+K G Sbjct: 6 IIALIDMDCFYVQVEQRLQPHLYGKPVAVVQHSSGNNRGGGLLAISYEARPFGIKRGMFP 65 Query: 56 FKQKDLFRRCGVVCFS-------SNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCD 106 + K L + ++ Y D S V L E + R VE S+DEA+ D Sbjct: 66 EQAKTLCSELTLCYVPVGEHVDKADITRYRDASAEVFKVLHEFNSRIIVERASVDEAYLD 125 Query: 107 LTGV-------------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAA 153 LT + D +IR + + T GI +K +AKL Sbjct: 126 LTALVEHIYETTDPSIKLKLIIGADLVEQIRRNIKKSTAFNCSAGIGSSKMIAKLVCSRH 185 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIR 212 K G + E K+ P+++V +G ++ + L + IKT+ +L++ + Sbjct: 186 KP------GQQTVVFNEAIPKVFEYTPINEVRNLGGKLGRALMEKFNIKTMGELSEISMS 239 Query: 213 FIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSY 270 + ++F + G ++ + + S++F + ++ + Sbjct: 240 HLSEYFPAQAKWIYNIAHGIDDEKV-TARDKQSSVAVSKNFPGANALKTDVDVKFWLEGL 298 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 ++L + I+T+ + + T D + + + Sbjct: 299 VKELVKRLIDDQIAN------IRTASTLHIGCTTDIHLTRSMQMKTYDPKALFTSVWAIF 352 Query: 331 DAIWQAGHR 339 I ++G Sbjct: 353 RHINKSGIP 361 >UniRef50_Q5JLR9 Os01g0757800 protein n=3 Tax=Oryza sativa Japonica Group RepID=Q5JLR9_ORYSJ Length = 642 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 72/427 (16%), Positives = 138/427 (32%), Gaps = 81/427 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL---SNNDGCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E P+L G+P V+ G +IA + EA+ GVK + Sbjct: 13 VIAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K + +V ++ +Y + V++ L + E SIDE + DLT Sbjct: 73 AKMVCPSINLVQVPVARDKADLNVYRSAGSEVVTILSTKG-KCERASIDEVYLDLTDAAK 131 Query: 113 ---CRDLTDFGREI---------------------------------------------- 123 + I Sbjct: 132 EMLLESPPELLELIFEEATKSNILGLPSDVSNREDSVRAWLCRADADYQDKLLSCGAIIV 191 Query: 124 ---RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 R VL+ T T GIA K LAKL + K Q+ + + + +LP Sbjct: 192 AQLRVKVLEETQFTCSAGIAHNKMLAKLVSGMHKPAQQ------TVVPSSAVQDFLVSLP 245 Query: 181 VDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 + + +G ++ L +G+ TV DL +++++ V + RG ++E Sbjct: 246 IKKMKQLGGKLGSSLQDDLGVNTVGDLLSFTEDKLQEYYGVNTGTWLWKIARGISGEEVE 305 Query: 239 EFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEK----LRSEHQYCRFISTFI 292 + + C ++F + + S++ + +E+ L + + ++ + Sbjct: 306 DRLLP-KSHGCGKTFPGPKALKNNASVKTWLDRLCEELSERIQSDLNQNKRIAQTLTLYA 364 Query: 293 KTSPFALNEPYYGN-SASVKLLTPT----QDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + ++ S S L T +D+ + + V Sbjct: 365 RACKKNKSDSIKKFPSKSCPLRYGTVKIQEDAMKLFESGLHDFLGSQNTKWSITSLSVSA 424 Query: 348 GDFFSQG 354 F Sbjct: 425 SKIFDIP 431 >UniRef50_A6X194 DNA-directed DNA polymerase n=5 Tax=Alphaproteobacteria RepID=A6X194_OCHA4 Length = 424 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 87/403 (21%), Positives = 152/403 (37%), Gaps = 27/403 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVL---SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 D + F+AS E L G+P+ V+ + VIA + EAK GVK P + K Sbjct: 10 LYLDFDGFFASVEQQCDRRLRGRPIGVVPFEGTDRTAVIACSKEAKNFGVKNVMPIKEAK 69 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L +V + LY N ++ +E + SIDE C L RD Sbjct: 70 RLCPDLILVPQKPD--LYRRAHNALLCEIETVIAIDTAKSIDELTCVLDDSGK-RDPELL 126 Query: 120 GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAK---KWQRQTGGVVDLSNLERQRK 174 I++ + +T +G A + LAK+A A K K + G + + Sbjct: 127 AARIKSAISNNIGQFITCSIGFAANRQLAKIACKAGKEETKRRGSYGNGLAIWWPTIMPD 186 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEP 233 + + ++D+ G+G ++K+L G+ T L + +RK + +V ER L G Sbjct: 187 PLLRVELEDIPGVGSNMAKRLYRNGVFTTTQLYALQPKHMRKIWNSVNGERLWYALHGYD 246 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 ++ + + R + +AA +LR E+ Y + ++ Sbjct: 247 ---IQAPSQQRGMFGHGRVLPPDARSITGAYEISRLLLTKAARRLRRENFYAAGLWLWLS 303 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDF 350 + +Y L D + I++A + G + GV L D Sbjct: 304 VRDGSWFGKHY--------LPVVNDDQAILSALRLLWQRVREDHPRGVTIFRVGVTLYDL 355 Query: 351 FSQGVAQLN-LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 Q++ L +D+A R E+ +D +N+K + Sbjct: 356 SPADERQMDMLNNDDAERQKWEKANNAVDAINSKYSGTIVSMG 398 >UniRef50_Q30PG7 DNA-directed DNA polymerase n=2 Tax=Campylobacterales RepID=Q30PG7_SULDN Length = 444 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 75/443 (16%), Positives = 142/443 (32%), Gaps = 68/443 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--------------------------- 33 M D++ F+ S + P L KPV + + Sbjct: 22 MKIHIDIDCFFVSAARIQEPSLEFKPVAIGGRSDTKIFNKDAKKQAVNFENSGSFVPTFY 81 Query: 34 --------------------DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 G + + EA+A GVK + L ++ + + Sbjct: 82 KAYEERDDDIDAFKDEDGRVRGILTTSSYEARAYGVKTAMSIKEALSLCPH--LIIKAPD 139 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 LY +S+ + L+ P VE SIDE + DL+G + D+ +F +R + T L Sbjct: 140 MSLYQKLSHELHEFLQTKIPLVEQASIDEFYGDLSGWVDDSDVPNFIAALRDEIKSVTKL 199 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 V +G A+T+ +AKL+ AK + + + +PV GIG+ +S+ Sbjct: 200 PVSIGAAKTRYIAKLSTTYAKPFG------CRVIFENELESFIEKIPVTKFAGIGKSMSE 253 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 KL I T+ +L+ + + + + G + ++ I SR+F Sbjct: 254 KLLDAQIHTLGELSKRRGT--IESWGPYAKELYLRVCGLSDDDITTKH-IRKSIGISRTF 310 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 + D +R+ + A + + + + + S Sbjct: 311 D-PLRDRNELRRRVHVLARHLSFAILKLKVIPTVFHLSLNYE--MSQKSHKNISLCEIFT 367 Query: 314 TPTQDSRDIINAATRSLDAI-WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 DS + D + + F + +L+L + Sbjct: 368 EKKFDS-----LCLKLFDEADVHKRLHLIRMSINCSSFTRESRKELSLIG-FEEDQKMYR 421 Query: 373 LMTVMDTLNAKEGRGTLYFAGQG 395 L + K G L + + Sbjct: 422 LTNHSQEIREKYGIDMLKWGSEL 444 >UniRef50_UPI0000E48503 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E48503 Length = 642 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 76/413 (18%), Positives = 134/413 (32%), Gaps = 56/413 (13%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++ FYA E + P L KP+ + V+ N A+A GV + Sbjct: 67 IVHIDLDCFYAQVEMLRNPTLRDKPLGI--QQKNIVVTTNYVARARGVSKLSYIKEALIK 124 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR---------- 111 +V + Y + S +V LE+ P VE DE F D+T + Sbjct: 125 CPDLVLVSGE-DLTNYRETSTKVTELLEQFCPLVERLGFDENFMDVTKLVESRLTSTDSK 183 Query: 112 -------------------------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 + +E+R T+ + LT G+A K LA Sbjct: 184 KLVHIGHSYESDAQIATQCQCGCRDRLTMGSHIAKEMRDTLKSKLGLTSCAGVATNKLLA 243 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSA-LPVDDVWGIGRRISKKLDAMGIKTVLD 205 KL K + + E + + + GIG KKL MGI+ + + Sbjct: 244 KLVGAHHKPNDQ------TVLFSEWTDSFIQTFTKLRQIPGIGHSSGKKLKGMGIQNLEE 297 Query: 206 LADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 L T + + F E +R G + P Q + SF + + P+ + Sbjct: 298 LRPTPVSTLADQFGKQQAETMLRLAHGVDDTPVVSKGPP-QSLSDEDSFKK-VGTLPAAK 355 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIK-TSPFALNEPYYGNSASVKLLTPTQDS---R 320 + + ++L+S+ + + ++ P + + S L D Sbjct: 356 EMMTGLIKNLIKRLQSDGRTPYTMRLTVRKYVPGSWHRESRQTGISPNLFQKHDDPSFLE 415 Query: 321 DIINAATRSLDAIWQAGHR--YQKAGVMLGDFFSQ--GVAQLNLFDDNAPRPG 369 ++ A L + + + S+ A + F A +P Sbjct: 416 QLLEVAVGLLQKLIDTNRPFHLTLINICFTNLRSKVTKGAIDSFFSKPAVKPK 468 >UniRef50_P75241 Uncharacterized protein MG360 homolog n=3 Tax=Mycoplasma RepID=Y537_MYCPN Length = 412 Score = 204 bits (519), Expect = 4e-51, Method: Composition-based stats. Identities = 75/395 (18%), Positives = 149/395 (37%), Gaps = 28/395 (7%) Query: 13 SCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 S E + P+L +P++V + V N A++ G+K G P K +L + + + Sbjct: 31 SVEEIENPELKNQPLIVGNRTSRSVVSTCNYLARSYGIKSGMPIAKALELCPQ--AIFAT 88 Query: 72 SNYELYADMSNRVMSTLEELSPR-VEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 S++ Y S ++ + + E V SIDE F + + R + I+ V ++ Sbjct: 89 SHFRNYRKYSAKIFAMIAEQFNLEVHTLSIDEGFVCFRDL-SPRKAFSLAKRIQRHVYEQ 147 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 + + +GI+ TLAK+ ++ AK + ++ + ++ + LP+ ++ GIG+R Sbjct: 148 LNFHISIGISNQFTLAKIFSNQAKPFGVKSCFS------KEVKRKLWPLPIVELPGIGKR 201 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKH-FNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 + DLA + K F + E GE Q E + I Sbjct: 202 QLDNAFKNNFHKIGDLAKCKDVTLFKRVFGIAWESLHAVALGETYTQ-SEQDVKSRSIAV 260 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSAS 309 S + ++Q + S +L+ Q C+ + +K++ F +N S S Sbjct: 261 SETLEYLNYSSNQLQQKLTSIFNELYARLQLSFQMCKGVVVQLKSNDFIVN------SHS 314 Query: 310 VKLLTPTQDSRDIINAATRSLDA-IWQAGHRYQKAGVMLGDFF--SQGVAQLNLFDDNAP 366 + T D + ++ + + + G + GV L Sbjct: 315 QSIKKYTADYQTLLVIVKKLFNRLLMGVGLNIRLIGVSFFGLKNNPSSSRPEGLLFYEYQ 374 Query: 367 RPGSEQ------LMTVMDTLNAKEGRGTLYFAGQG 395 + +Q L ++ +N G + A + Sbjct: 375 QAKPKQQTAHFALDQMIYEINQSFGYEIIQRAKKL 409 >UniRef50_A0LGS2 DNA-directed DNA polymerase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGS2_SYNFM Length = 393 Score = 204 bits (518), Expect = 6e-51, Method: Composition-based stats. Identities = 68/402 (16%), Positives = 135/402 (33%), Gaps = 16/402 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D+ FYA E + RP+L + +V+ + V N+ A G++ G P + Sbjct: 5 IVHLDIPNFYAVLEELRRPELKKRSMVLAEPSARAIVQGINSNAGKEGIREGMPLAHARR 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL-TDF 119 + RR V + Y + +++ SP VE F DLTG + D Sbjct: 65 MCRRVLAVA--PDLRFYREEHQQILKEFGFFSPLVEGAWPGHYFVDLTGTQRLLGPGPDV 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + + + L +G+A K ++++A+ G ++ + ++ L Sbjct: 123 ACRMERHLATQRRLRARIGLAANKLVSQVASTCIVP------GDLNCIFPGGETSFLAPL 176 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV + G+G + +L I+ + LA + + F + R RG + Sbjct: 177 PVTSLPGVGAVTASRLADFNIRRIGQLAALSLEALCGVFGKMGSRLFNVARGIDPTPVLP 236 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + S D + + A LRS +++ I+ + Sbjct: 237 S-RESPRLVVAHSLERDEIDRDRLEALLFQQVEEAGWALRSHNRHPTRFVLEIRYADGIT 295 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 SA R + ++ ++ + L DF Sbjct: 296 AR-----SAHALFSPAIHADRRLFRVILPVFRQLFNRRIALRRIVLELSDFAMPFRQASL 350 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 +++P G L +D + + G + + Q Q Sbjct: 351 FSREDSPPSGERDLQQALDGIRGRFGNRAISWGNAMSGAQRQ 392 >UniRef50_UPI0000DB76DA PREDICTED: similar to Rev1 CG12189-PA n=1 Tax=Apis mellifera RepID=UPI0000DB76DA Length = 844 Score = 204 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 57/369 (15%), Positives = 112/369 (30%), Gaps = 74/369 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-------CVIARNAEAKALGVKMGD 53 + D++ F+ S +P+L G PV V + + + EA+ GVK G Sbjct: 226 VIMHIDMDCFFVSVGLRDKPELKGLPVAVTHAKGNKNSCSLSEIASCSYEARKAGVKNGM 285 Query: 54 PWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC 113 + + + N+E Y +S + T+ + +E S DE + D T + Sbjct: 286 FLGEALKICPDLRTI--PYNFEGYTKVSYILYDTVASYTLDIEAVSCDEMYADCTKILEE 343 Query: 114 RD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 +F IR + ++T V G + K LA+LA AK + E Sbjct: 344 SGLTPMEFATIIRQEIKEKTGCPVSTGFGRNKLLARLATRKAKPNGQFY------IQQEH 397 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 +S+ V D+ D + ++ I Sbjct: 398 INNCISSFNVQDLP-------------------DNSKLNLEHI----------------- 421 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 ++ + ++G R + + +L + R I+ Sbjct: 422 ------------RKSVSAEVNYGIRFESNEDAIDFLKKLSHEVYNRLNKANAKGRCITLK 469 Query: 292 I---------KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 + +T F + + S + P D I + + + + Sbjct: 470 VLIRAKEAPKETEKFMGHGLCDYVTKSKNFIAPINDVDIITKEVIILWNQMQKIPEDARG 529 Query: 343 AGVMLGDFF 351 G+ + Sbjct: 530 IGIQISRLE 538 >UniRef50_D2BP58 ImpB/MucB/SamB family protein n=7 Tax=Firmicutes RepID=D2BP58_LACLK Length = 488 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 87/461 (18%), Positives = 154/461 (33%), Gaps = 63/461 (13%) Query: 2 FALCDVNAFYASCETV-FRPDLWGKPVVV---LSNNDGCVIARNAEAKA-LGVKMGDPWF 56 DV + YAS E V + + V N G +A + K G+K Sbjct: 20 ILFEDVKSNYASIECVQRNLNPLTTSLCVMSRADNTKGLTLASSPTFKKVFGMKNISRAS 79 Query: 57 K-----------------------QKDLFRRCGVV-----------CFSSNYELYADMSN 82 + V +LY D Sbjct: 80 DLPFIIETRKFNFPQWYRTHTDIYGQRTEPTLQYVAFVESWAKRTWLVPPQMQLYVDYKI 139 Query: 83 RVMSTLEELS--PRVEIYSIDEAFCDLTGVRNCRDLT---------DFGREIRATVLQRT 131 +V L + + YSIDE+F D+T N +++ +L + Sbjct: 140 KVTEILTNYTSIEEIHSYSIDESFLDITESLNFFYPDIRNRYEQMNLIALDLQREILDKL 199 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP-VDDVWGIGRR 190 L V VG+ LAKLA K + L E + LP + D WGIG+R Sbjct: 200 GLYVTVGMGDNPLLAKLAMDNYAKHNQNMRA---LIRYEDVPSKLWTLPKMTDFWGIGKR 256 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE-FAPTKQEIIC 249 K+L+ +GI ++ +LA+ D +++ + + G + E + P Sbjct: 257 TEKRLNKLGISSIKELANADPLLLKQKLGTIGLQHFFHANGIDESNVREKYIPKSSSFSN 316 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSAS 309 S+ + I A A +LR + +S ++ A + + Sbjct: 317 SQILPRDYHKQKEIELVIKEMAENLAIRLRKGGKMASNLSLYV----GAAASSEHSSIKI 372 Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF---DDNAP 366 + + TQ+++++ + A R + G ++ G+ V QL+LF ++N Sbjct: 373 SRNIEATQNTKELQDLAIRLFREKY-QGGAVRQIGISGNQLSDNSVKQLSLFETVEENQS 431 Query: 367 RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 E L +D + K ++ A + + R L Sbjct: 432 NEKQESLQKAIDEIREKFDFLSIQKASSLSEGSRVIYRNKL 472 >UniRef50_D1I1G6 Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) n=5 Tax=Magnoliophyta RepID=D1I1G6_VITVI Length = 773 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 76/401 (18%), Positives = 129/401 (32%), Gaps = 80/401 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E +PDL G P V+ G +IA + EA+ GVK + Sbjct: 13 IIAHIDMDCFYVQVEQRKQPDLRGLPTAVVQYNSWKGGGLIAVSYEARKFGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K + + +V ++ +Y + + V+S L R E SIDE + DLT Sbjct: 73 AKQVCPQIQLVQVPVARGKADLNVYRNAGSEVVSILARKG-RCERASIDEVYLDLTDAAE 131 Query: 113 ----------------------------------------------------CRDLTDFG 120 Sbjct: 132 AMLAEMPPESLEAIDEEALKSHVLGLNEGGNDIKESVRVWLCRSQADHRDKLLACGALIV 191 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 E+R V + T T GIA K LAKLA+ K Q+ + L R L+ +LP Sbjct: 192 AELRMQVFRETEFTCSAGIAHNKMLAKLASAMNKPAQQ------TIVPLSCVRGLLGSLP 245 Query: 181 VDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLE 238 + + +G ++ L + +G+ TV DL +++ + + RG ++ Sbjct: 246 IKKMKQLGGKLGSSLQSDLGVNTVGDLLQFSEEKLQECYGINTGTWLWNIARGISGEEV- 304 Query: 239 EFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEKLR----SEHQYCRFISTFI 292 E + ++F + S+ + E+LR + ++ Sbjct: 305 ESRLLSKSHGSGKTFPGPKALKTIASVENWLNELCEELDERLRSDLEQNKRIAHTLTLHA 364 Query: 293 K-TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 + + S S L I A A Sbjct: 365 RAYKSNDSDSHKKFPSKSCPLRYGI---AKIQEDALNLFQA 402 >UniRef50_A7SBP1 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7SBP1_NEMVE Length = 403 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 73/405 (18%), Positives = 132/405 (32%), Gaps = 61/405 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P L +PV V + ++ N A+A+G+K + K Sbjct: 4 VIVHIDIDCFYAQVEMIRNPCLRDRPVGV--SQKHILVTCNYVARAMGLKKLISLAEAKK 61 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV---------- 110 ++ + Y + S+RV L + RVE +DE + D++ + Sbjct: 62 KCPDLVIINGE-DLTKYREFSSRVTKLLRRFALRVERLGLDENYVDVSELVQERMKHAPR 120 Query: 111 ----------------------------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 + E+R + LT GIA Sbjct: 121 GSYIAVGCIYGDNILKGSSNEVCPCGCHERLTVGSVIASELRKAIFDEIGLTTCAGIAHN 180 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 K LAK+A K ++ L ER LM LPV V GIGR +L ++GI T Sbjct: 181 KLLAKIAGEQNKPNKQ------TLLYTERVEGLMGLLPVRKVPGIGRSTCARLGSLGITT 234 Query: 203 VLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 + +L + + + FN R G Q+ + + I S+ + Sbjct: 235 IAELQECSKKALLNEFNSQEVRILHALSHGADDSQVSTDSMP-KSISEEDSYSN-LCSLE 292 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT----- 316 S++ + ++ + + + + I+ Y S + Sbjct: 293 SVKTNLRVLIGNLIPRITEDTGHPQTVRLAIRRG-GQAPGVYKKESRQCPVPDRFAMNTP 351 Query: 317 QDSR---DIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVA 356 S + + + + V L +F + Sbjct: 352 NSSEKINVLFGTVFGLFHKLVDVSKSFQVRVLNVCLSNFQRRPER 396 >UniRef50_Q98R22 DNA-DAMAGE REPAIR PROTEIN MUCB n=1 Tax=Mycoplasma pulmonis RepID=Q98R22_MYCPU Length = 425 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 77/389 (19%), Positives = 164/389 (42%), Gaps = 22/389 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 + D ++++ S R DL+GK +VV N+ + + + EAKA G+K+G P +K K Sbjct: 13 VIFHLDADSYFVSAIRTIRKDLFGKSMVVAHNHKRAIITSASYEAKAKGIKVGMPLYKAK 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGV-RNCRDLT 117 + VV ++ELY+++S+ + + L E + +++IYSIDE F D + + + Sbjct: 73 LIDP--NVVVADYSFELYSNLSSNIFNFLYENYTKKIQIYSIDEFFIDASDLVVKKGSIL 130 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 +E++ ++ + +G+ +AK++ K + ++ +K + Sbjct: 131 KLAQEMQKAIMDNFSIPFSIGVGPNLWMAKMSTSINKPYGI------TITKRSDLKKNIY 184 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLAD--TDIRFIRKHFNVVLERTVRELRGEPCL 235 + + + GIG+ KL + IKT+ D + + K + + L+ E +G Sbjct: 185 SQDISEYVGIGKSGLAKLSHLNIKTIGDFCNSVFAQGALEKIYGIKLKTIKEECQGISND 244 Query: 236 QLEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 Q++ Q + SF + + S+ +KL++ Y ++ ++ Sbjct: 245 QIDTSQNDAQSLGSEISFSHDDLDERSSIFNYFKLICELLEKKLKNRGIYANTLTVKLRD 304 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + K +S+DI+N + W + G+ L DF Sbjct: 305 QNYK------WKTKRKKYSIKLFESQDIMNRVIEIFNQFWDEKK-LRGLGISLSDFGDIY 357 Query: 355 VAQLNL-FDDNAPRPGSEQLMTVMDTLNA 382 + L+ D E++ ++ ++N Sbjct: 358 QSDLSFDLFDQKYDSKKEKINALIKSINK 386 >UniRef50_A0RN38 DNA polymerase IV 1, putative n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RN38_CAMFF Length = 380 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 70/405 (17%), Positives = 144/405 (35%), Gaps = 37/405 (9%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND----------GCVIARNAEAKALGVK 50 MF D++ F+ S PDL GK V V N G +++ + EA+ LG+ Sbjct: 1 MFLHIDLDCFFVSASRTVNPDLNGKVVAVAGGNKTDIFGDFIESGIIVSASYEARRLGIG 60 Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 + ++ ++ +N+ LY +SN + L + + +E YSIDE F +L G Sbjct: 61 CTMHSSIARKIYP--NIIILPTNFNLYKTLSNNLFKLLLDYTDEIEKYSIDEFFLNLKGT 118 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + D +F + ++ + L +GI++TK +AK A + AK + + + Sbjct: 119 KFENDPLNFAKILQNRIKNELKLPSSIGISETKFIAKFATNLAKPSKIKIINDISEI--- 175 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 + G+G L + G+ + D+ + + I + Sbjct: 176 ------QNYEIKMFPGVGASAENFLKSHGVIYIKDV--FNAQKIFAKLGKNGLILYSRIC 227 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 G+ Q+ ++ + +R+F E I D + + + + ++ Sbjct: 228 GKSRDQIH-KNRPRKSLCIARTFKE-IRDRNIIEKRLMVLCRYVSFEVFMLGVNPTKFEL 285 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAGVMLGD 349 IK + + + + + + V +G Sbjct: 286 KIKYK--NNRNINASVTKHSIFTQ-----KLLETSIKELFLKHDKTSDFAITYLSVGVGG 338 Query: 350 FFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 + AQ++LFD + + + + K G + G+ Sbjct: 339 LNEK--AQMSLFDI--QNKKDKAISDTLAKIRLKYGVNAIKSGGE 379 >UniRef50_Q6BS95 DEHA2D10560p n=2 Tax=Debaryomyces hansenii RepID=Q6BS95_DEBHA Length = 1175 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 71/385 (18%), Positives = 124/385 (32%), Gaps = 44/385 (11%) Query: 2 FALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQ 58 D + F+A+ + P+L P+ V IA N A+ GV+ G K Sbjct: 458 ILHVDFDCFFATASCLNHPNLDINKDPIAVTHGGRTSDIASCNYVARKFGVRNGMWSGKA 517 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTL--EELSPRVEIYSIDEAFCDLTGVRNCRD- 115 K L ++ +++ Y S + L + + SIDE D T Sbjct: 518 KQLCPE--LIQLDYDFDAYERCSAKFYDYLISRGIFDHIFPVSIDEVLLDATSFCLESGR 575 Query: 116 -----LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + + + IR + T+ +V VG + LAKLA AK + E Sbjct: 576 LREDIINELSQTIRKGIFSLTNCSVSVGASHNVLLAKLALKKAKPNGQFYL-------HE 628 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKT-------VLDLADTDIRFIRKHFN-VVL 222 + + + +PV D+ GIG I KL I+ + DL + F Sbjct: 629 KVDEFLDNIPVRDLPGIGNSIKYKLIEE-IQDMSSQEPLIKDLKPFTELQLMNIFGKKTG 687 Query: 223 ERTVRELRGEPCLQLE------EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 + + RG ++ E ++ + +FG R P + + + + Sbjct: 688 TKLYQFARGIDNSSIKLDLNNSESVLGRKSVSVDVNFGIRFDTVPQVEAFLMNLSKEMYS 747 Query: 277 KLRSEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAAT 327 +L S I+ I + S S KL PT D + + Sbjct: 748 RLISLGMCGSSITLRLAKRAHDAPIDPPKYLGMGLCDFVSKSSKLGVPTNDWGIMGSEIK 807 Query: 328 RSLDAIWQAGHRYQKAGVMLGDFFS 352 + + + + Sbjct: 808 ALFRMVNVPVKELRGIAITMNKLED 832 >UniRef50_B8BXL1 REV1 protein n=1 Tax=Thalassiosira pseudonana RepID=B8BXL1_THAPS Length = 1148 Score = 203 bits (515), Expect = 1e-50, Method: Composition-based stats. Identities = 68/394 (17%), Positives = 135/394 (34%), Gaps = 57/394 (14%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---------------------NNDGCVIAR 40 L D++ F+AS P +PV V N+ + Sbjct: 456 VLLVDMDCFFASVSLRRYPQYRNQPVAVGHTGTVVLPCNYNNQKIVGTNLKNSSSELSTC 515 Query: 41 NAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTL----EELSPRVE 96 N A+ GV+ G + ++ ++E Y ++S+ V L + +E Sbjct: 516 NYIARKFGVRKGMFLGDAIMVCPD--LIVLPYDFEGYEEVSSIVADELVRYAQRFHGCLE 573 Query: 97 IYSIDEAFCDL---TGVRNCRDLTD----FGREIRATVLQRTHLTVGVGIAQTKTLAKLA 149 S DEA+ +L ++ D +IRA ++ +T T +GI K LAKLA Sbjct: 574 QVSCDEAYLELNLSPDDCEDSNVEDFVKFLAEQIRAYIVNKTECTASIGIGSNKFLAKLA 633 Query: 150 NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT 209 K E + ++ L + D+ GIGR+ KK+ ++TV D+ + Sbjct: 634 ADKVKPDASYLV--------EDWQTFLNGLTLRDLPGIGRKFEKKMTPHHLRTVNDIWEL 685 Query: 210 DI---RFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + + + ++ G+ + ++ I ++G R + Sbjct: 686 GDSAESILGEIIGRGNALKILQFCGGKDDRAVTP--AARKSIGAECNYGVRFDGPYGVDY 743 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTS--------PFALNEPYYGNSASVKLLTPTQ 317 + + +++ + + S F + S S+ + T+ Sbjct: 744 MLAGLSKEVEKRMTLAEVRGSKLVLKVMKSRDASKQPGKFLGHGACDSLSKSIDIPL-TR 802 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 S I AA R + + + G+++ Sbjct: 803 KSDAITAAAMRLFEQLSIDECLIRGMGLVVNSLV 836 >UniRef50_A8IYH8 Deoxycytidyl transferase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IYH8_CHLRE Length = 764 Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 70/391 (17%), Positives = 118/391 (30%), Gaps = 77/391 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG----CVIARNAEAKALGVKMGDPWF 56 + D++ F+AS V RP+L G+P+ V +N G V + N A++ G++ Sbjct: 287 VVLHVDMDCFFASVAAVGRPELAGRPLAVCHSNSGKGTGEVSSANYVARSYGIRADMFMG 346 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + K L Y D Sbjct: 347 EAKRLCPDLA----QPQPHTYGD-----------------------------------PA 367 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +RA + T T GI +A+LA AK + G L Sbjct: 368 EALAARLRADIAAATGCTASAGIGPNMLVARLATRRAKPNGQFRGCHTGLV--------- 418 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 G+G + KLD MGI +V L + G+ + Sbjct: 419 ---------GVGWSTADKLDKMGITSVRQLQKALGAKL-------GSDLWAHAHGQDERR 462 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT-- 294 +E ++ + ++G R T + + AA A +L++ R ++ K Sbjct: 463 VEP-PKARKSVGAEVNYGIRFTTEEEAERFMGDLAAEVAARLKTAGVKGRSLTLKAKRRL 521 Query: 295 ------SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 + F + S S+ L T D+ D+ A L A+ + G+ + Sbjct: 522 AGAPEPAKFMGHGACDNISRSMTLGRFTDDAADLRREAVALLRALAVPAAELRGLGLTVS 581 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 S A + A D Sbjct: 582 RLDSDPAAHTSRPSAPAAAKLQAPPRRAFDA 612 >UniRef50_C5DG10 KLTH0D01518p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DG10_LACTC Length = 994 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 70/396 (17%), Positives = 127/396 (32%), Gaps = 43/396 (10%) Query: 2 FALCDVNAFYASCETVF--RPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQ 58 D + F+A+ + R DL P+ V N+ + + N A++ GVK G Sbjct: 359 IFHVDFDCFFATVSALSDARYDLSRDPLAVAHGNNSSEIASCNYVARSFGVKNGMWVRSA 418 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFC--------DLT 108 + L ++C N+E Y S + L + SIDEA C D Sbjct: 419 RRLCP--NLICLPYNFEQYEVNSKLLYQILAGSGFFQMILPISIDEAICVKYLDGLPDGD 476 Query: 109 GVRNCRDLTDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + + R+IR V T TV +G + + LA+LA AK + Sbjct: 477 ASAHQQ-CEAITRQIRRDVFDATNGCTVSIGCSNSLVLARLALKKAKPNGQCVMAS---L 532 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK------TVLDL-ADTDIRFIRKHFN- 219 + + LP+ D+ G+G I K+ + T+ DL ++ ++ + Sbjct: 533 EQDSIDAFIEELPLRDLPGVGATIVDKVQQHILFEQTAEPTIGDLKRNSSLQLLASKLGT 592 Query: 220 VVLERTVRELRGEPCLQLEEFAP------TKQEIICSRSFGERITDYPSMRQAICSYAAR 273 + L G+ + ++ I ++ R + + I Sbjct: 593 KTGHKLHLFLSGKDDEENSRVLRDPLDYFARKSISVDINYAIRFDTIHEIDEFIDRICEH 652 Query: 274 AAEKLRSEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 KL ++ I+ + + + S S + PT ++ I Sbjct: 653 LTTKLGELDMVTPQVTLKVTRRCEHAPIEPAKYLGSGECDTFSRSSRFGVPTCEAGLIST 712 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 S + + V L L Sbjct: 713 EVKSSFRMLGCPPKDLRGIAVQLNKLEKVSDRVCQL 748 >UniRef50_A4HGJ3 DNA polymerase kappa, putative n=4 Tax=Trypanosomatidae RepID=A4HGJ3_LEIBR Length = 754 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 72/391 (18%), Positives = 130/391 (33%), Gaps = 50/391 (12%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++ FYA+ E P P+ V S + N A+ GV+ G P F Sbjct: 232 IYVHVDMDMFYAAVEMKKNPQYAEVPLGVGSM--AMLSTTNYLARQYGVRSGMPGFIGMR 289 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD----- 115 L + +V +++ S + + P ++ +DE L Sbjct: 290 LCPQ--LVIVPTDFAACRVESAKFKGVVRNYDPAAQVLGMDEIMMRLDDYLAQHHMDATT 347 Query: 116 -------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 E R V + T LT GIA T TLAK+A+ K + V L + Sbjct: 348 HAERFDVAERIIEECRRRVAEVTGLTASAGIAPTPTLAKMASDYKKPNGQF---AVRLFS 404 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 E ++++PV V GIG+ L +GI T+ ++ R E + Sbjct: 405 REAVMDYLASIPVRRVPGIGKSRESILAGLGIHTLGEVYQQRHRLFYILTRKTYEFLLAS 464 Query: 229 LRGEP------------------------CLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 G + E ++ + R+F + + + ++ Sbjct: 465 AMGVGGMYDSLEAAPPSSAGTTTKTVAALDGESNEDDWRRKSVGQERTFYK-LKNRMELQ 523 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 ++ E L +E C + +K F + + S L T D + Sbjct: 524 AIAHMNLRQSHETLVAEDLLCSQVVLKLKHRSFHVKQ------HSKSLNLYTDDYEVLRR 577 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 A L + +++ G+ L + Sbjct: 578 ALDDLLLPVVDDFAKFRLLGIRLEKLRRRPQ 608 >UniRef50_C5KD43 DNA polymerase IV, putative n=3 Tax=Perkinsus marinus ATCC 50983 RepID=C5KD43_9ALVE Length = 585 Score = 201 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 75/411 (18%), Positives = 143/411 (34%), Gaps = 49/411 (11%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 D++ FYA+ E P L P+ V D + N A+ GV+ P F ++L RR Sbjct: 18 IDMDMFYAAVEIRDDPSLHDVPLAVGG--DAMISTANYVARKYGVRAAMPGFIARELCRR 75 Query: 65 C------------------GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCD 106 G+ + Y S T+ P +++ S+DEA+ D Sbjct: 76 QGVELRLEGPSGVVVMMEGGLRFKPVDMPRYQAASKIFKDTVSLYGP-MKMLSLDEAYID 134 Query: 107 LT-----------GVRNCRDLTDFGREIRATVLQR-THLTVGVGIAQTKT-LAKLANHAA 153 +T + + +R V ++ + LT GIA+ LAK+A+ Sbjct: 135 ITAKVAEAAMVDESISEVEAASLLVSRMREEVCEKSSGLTCSAGIARGCFRLAKMASDVN 194 Query: 154 KKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIR 212 K + + + + ++P+ + G+GR ++L A +GI V D+ Sbjct: 195 KPNGQFMVPTTT----QGMLEWLHSMPIRKLHGVGRVSERELSAGLGIHKVGDIIIKAAE 250 Query: 213 FIRKHFNVVLERTVRELRGEPCLQLEEFAPT--KQEIICSRSFGERIT-DYPSMRQAICS 269 + + + G ++ A + I RS + + + + Sbjct: 251 LLHAMSSSGGHWLIDAAMGVTDMEDVTAAAESGPKSISQERSLSTAKSGSAAYLHEVLEE 310 Query: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 ++ E + QY R ++ +KT F + S L + R + AA+ Sbjct: 311 LCSQVMELCAEKEQYGRCVTVKLKT--FEWDVKQ----KSNTLKREVRSGRLLYEAASEL 364 Query: 330 LD-AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 + A+ + GV + F + + D + +D Sbjct: 365 MSTALATLKKPIRLLGVRVSSFQTAVPQGQSTLGDFLAAHKASSSRVAVDE 415 >UniRef50_A9KJA2 UMUC domain protein DNA-repair protein n=25 Tax=Bacteria RepID=A9KJA2_CLOPH Length = 507 Score = 201 bits (510), Expect = 6e-50, Method: Composition-based stats. Identities = 76/496 (15%), Positives = 146/496 (29%), Gaps = 92/496 (18%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E + R D +VV + +A + KA G+ F+ Sbjct: 6 YISIDLKSFYASVECIERGLDPLTTNLVVADASRTEKTICLAVSPSLKAYGISGRARLFE 65 Query: 58 QKDLFRR-------------------------------CGVVCFSSNYELYADMSNRVMS 86 + Y + S R+ + Sbjct: 66 VVQKVEEVNAVRLHKAPGRAFSGDSFIDTDLKSSPSISLNYIVAPPRMAYYIEYSTRIYN 125 Query: 87 TLEELSP--RVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQT 142 + + +YSIDE F D T N + + ++ VL+ T +T GI Sbjct: 126 IYLKYIASEDIHVYSIDEVFIDATDYLNTYNLSARELATKMILDVLKTTGITATAGIGTN 185 Query: 143 KTLAKLANHAAK---KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 L+K+A + +L + +R L S P+ D W +G+ +KKL+ G Sbjct: 186 LYLSKIAMDIQAKHIPDDNNGMRIAELDEMSYRRALWSHQPLTDFWRVGKGYTKKLEEQG 245 Query: 200 IKTVLDLADTD---------IRFIRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQEI 247 + T+ D+A + K F + E + G ++ + P+ I Sbjct: 246 LFTMGDIARCSLGKPTDYYNEDLLYKLFGINAELLIDHAWGWEPCTIADIKAYKPSTNSI 305 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS------------ 295 + + + + + L + + + Sbjct: 306 GSGQ-VLQCAYTFDKTKLIVREMTDLLVLDLVDKRLVTDQLVLTVGYDIENMTNLKIKKS 364 Query: 296 -------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 S L T ++ I++A T + I ++ + Sbjct: 365 YHGAITTDHYGRTVPKSAHGSANLGRQTSSTKLILDAVTELFERIVDKNLLVRRVNITAN 424 Query: 349 DFFSQGV-------AQLNLF-----------DDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 + QLNLF D+ A +++ M + K G+ + Sbjct: 425 HVIDETTVQKTDSFEQLNLFTDYVTENVKKEDEEAELVREKRVQKAMLDIKKKYGKNAIL 484 Query: 391 FAGQGIQQQWQMKRAM 406 + + R Sbjct: 485 KGMNLEEGATTVDRNK 500 >UniRef50_Q8EWQ4 DNA-damage repair protein MucB n=1 Tax=Mycoplasma penetrans RepID=Q8EWQ4_MYCPE Length = 386 Score = 200 bits (508), Expect = 9e-50, Method: Composition-based stats. Identities = 69/403 (17%), Positives = 150/403 (37%), Gaps = 27/403 (6%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D+++F+AS E RP+ P+ V + + N A+ LGVK K + Sbjct: 5 IFHIDMDSFFASVELAERPEYEKLPLAVGHL---VIASANYVARGLGVKSAMNIVDAKKI 61 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTDFG 120 + ++ N Y MS+++ S L LS +E SIDE + D++ + +F Sbjct: 62 CPQLTIIY--PNKNKYTSMSDKIYSFLSSLSKNIETGSIDEWYLDVSNTQYENWKEIEFA 119 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP 180 ++ ++ Q+ +L VG + T LAK+A + AK + + + L Sbjct: 120 SLVKNSIKQKFNLNCTVGNSFTPFLAKMATNLAKPDG------FLTLTKDNFKSYIYDLH 173 Query: 181 VDDVWGIGRRISKKLDAMGIKTVLDLADT-DIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + + GIG ++++L + + + D+A+ + IRK + + + G C + Sbjct: 174 ISKIIGIGPSLTRQLIELNLHYIKDIANVKNDYLIRKKIGLHWSKLRMNVLGIICDPINP 233 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 ++ + S+S ++Y + I L+ + + ++ I+ S Sbjct: 234 DY-KRKNLGRSQSI-RNYSEYQEFLKLIKELTDDINSGLKYQDFMFKSVNIKIRYSDGD- 290 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH--RYQKAGVMLGD-FFSQGVA 356 + S + ++ + I + + + + Sbjct: 291 -----SATKSFNFVNFQNQIP--LHVVVDLFEQISDFSKYDQVINLSITANNIMENDNNE 343 Query: 357 QLNLFDDN-APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 QL +FD +L + +N + +++ + Sbjct: 344 QLTIFDSPTQKISTESKLEKIRKQVNKTLNKKIIHYPSSRSNR 386 >UniRef50_A3TNV0 Putative uncharacterized protein n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TNV0_9MICO Length = 347 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 86/358 (24%), Positives = 150/358 (41%), Gaps = 24/358 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AF+AS E P L G+P+VV V + EA+ALGV G P F+ Sbjct: 8 VLIHADADAFFASVEQRDHPHLRGRPMVVGPQ---VVACASYEARALGVHAGMPLFQAVR 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTD 118 + ++ + Y S +M+ EL+P VE S++EAF D++ + + + Sbjct: 65 RWPE--LLVAPFRAQAYESASADLMALFRELTPLVEPGSMEEAFLDVSALDGGSVEEAGR 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 E+RA + L V G+A+ K AKLA+ AK + + + E + ++ Sbjct: 123 LAGELRARAHRELGLPVSCGVARAKLFAKLASRRAKPDG------LVVVDAETEARVRPR 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI--RKHFNVVLERTVRELRGEPCLQ 236 LPV D+WG+G + KL G+ V DLA + + R+ + + + G Sbjct: 177 LPVADLWGVGPMTTDKLHDAGVVLVADLAGWTVDGLVERRVAKAMAKNLIAIRDGVDDAT 236 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 ++ ++ I RS G ++++A+ RA +L + + + ++ Sbjct: 237 IK-LPTARKSISSQRSLGRSTRQRSTVQEALRDNVIRALNRLGDDPRPATRLDVHLRYDD 295 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA--IWQAGHRYQKAGVMLGDFFS 352 + L PT+D +I AA +L+ + G GV G Sbjct: 296 ------DHAVVVPGALGEPTRDPATLIGAALAALERTAYEEDGRGVTMVGVTFGLPAP 347 >UniRef50_A4YEC1 DNA polymerase IV n=18 Tax=Sulfolobaceae RepID=DPO4_METS5 Length = 349 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 79/368 (21%), Positives = 134/368 (36%), Gaps = 27/368 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-----GCVIARNAEAKALGVKMGDPW 55 + D + F+A E + P L GKPVVV + G V N EA+ LG+K G P Sbjct: 2 IVLFVDFDYFFAQVEEILNPSLKGKPVVVCVYSGRTKDSGAVATSNYEARKLGIKAGMPI 61 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 K K++ V E+Y +S RVM+ + ++EI SIDEA+ D+T D Sbjct: 62 IKAKEI--GKDAVFLPMRKEVYQQVSRRVMNIISGYGDKLEIASIDEAYLDITRRVKDFD 119 Query: 116 -LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 + R+++A VL++ L V VGI K +AK+ K + + E + Sbjct: 120 EAKELARKLKAEVLEKERLRVTVGIGPNKVVAKIIADMNKPDG------LGIIYPEEVKD 173 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 + L + V G+G+ + L +GI + D+ + + + Sbjct: 174 FLYNLDISKVPGVGKITEEILRKVGINRLGDVINKSGELVNLVGKSKANYLLSLANNTYH 233 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 +E + R P + + + + I I Sbjct: 234 DPVE---------SREITHRGRYVTLPENTRDLNRILPSLKRSIEEAYSKVDGIPMEIYV 284 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR-YQKAGVMLGDFFSQ 353 + S K + ++ A L+ I ++ R ++ GV LG Sbjct: 285 VAIMEDLDIVSKGKSFKFGVSQDRA---LSVAQELLNKILESDKRKLRRVGVRLGKITKS 341 Query: 354 GVAQLNLF 361 + L Sbjct: 342 STLEDFLH 349 >UniRef50_Q6KI15 DNA-damage repair protein n=1 Tax=Mycoplasma mobile RepID=Q6KI15_MYCMO Length = 411 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 74/403 (18%), Positives = 163/403 (40%), Gaps = 20/403 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARN-AEAKALGVKMGDPWFKQKD 60 D ++F+ + RP+L GK V V S +++ EAK G K+ + + Sbjct: 7 IFHIDADSFFVNSIITIRPELKGKEVAVSSTKSSSIVSSLSYEAKQKGAKVPMQMREVRK 66 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRN-CRDLTD 118 ++ N++L++ +SN++ L + + ++EI SIDE + D+T + + + + Sbjct: 67 YCP--NIITVLPNFKLFSIISNKIFDYLAKNFTKKLEIASIDECYLDVTDILHNYENKYN 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 R+++ V + T + + +GI+ K LAK+A+ AK + ++++ Sbjct: 125 LARKMQEGVYKYTKIPISIGISHNKFLAKMASPLAKPNGIAH------LDKNNFKEILFP 178 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKH-FNVVLERTVRELRGEPCLQL 237 + + +GIG+ +KL+++ + + DL D K F L G ++L Sbjct: 179 MKISKFYGIGKSSIEKLNSIDVNFIKDLLDESKEASFKRIFKNRWIDIKNNLNGNGSIEL 238 Query: 238 EEFAPTKQEIICSRS-FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + +E+ ++ F + I D + + + + + + I IK Sbjct: 239 DLEHNDVKEMGKEKTFFEQSIDDRNIILKELEKLSEIVSHNAKQRFNAGYVIKVKIKYYN 298 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 ++ S V L D+ +I A D +W + G+ LG + Sbjct: 299 LSV------VSMQVSLPFAINDADEIFKNAISLFDKLWDE-KAIKLIGIKLGKLVNLFEE 351 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + + + ++ +++ N +Y A +++ Sbjct: 352 KTQISLFEEKIMNNSKIDNLINDFNTNFNSRLIYKASNFPKKE 394 >UniRef50_Q6CIW8 KLLA0F23375p n=1 Tax=Kluyveromyces lactis RepID=Q6CIW8_KLULA Length = 829 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 69/414 (16%), Positives = 123/414 (29%), Gaps = 45/414 (10%) Query: 1 MFALCDVNAFYASCETVFRP--DLWGKPVVVLSN-NDGCVIARNAEAKALGVKMGDPWFK 57 ++ D + F+A D+ P+ + N+ + + N A++ GV G Sbjct: 215 VYFHIDFDCFFAQVSAKIDGKYDIHATPIAISHGINNSDISSCNYVARSFGVYNGMWVSS 274 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEE--LSPRVEIYSIDEA--FCDLTGVRNC 113 L + ++ Y +SN S L++ + V SIDEA +T Sbjct: 275 ALKLCPDLKI--LDYEFDEYEAISNLFYSALKDIGIFKMVLPISIDEAIGCMLITPDITS 332 Query: 114 RDLTDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 LT ++R V T +V VG + LA+LA K ++ Sbjct: 333 ELLTQKCMQVRNAVYNVTQGYSVSVGCGPSVLLARLALRKGKPNGFHISWFDTVT---EC 389 Query: 173 RKLMSALPVDDVWGIGRRISKKLDA-----MGIKTVLDLADTD---IRFIRKHFNVVLER 224 + + D+ GIG K+ I + DL + + I+ + ++ Sbjct: 390 HAFIDHFKLKDLPGIGYSTDLKIKEQFGNVQNISDLRDLLERPSNVSKLIKVIGSKNTKK 449 Query: 225 TVRELRGEPCLQ------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 L G+ + K+ + ++ R + + A EKL Sbjct: 450 LQIYLDGKDDDESISMVKDPHTYFQKKSLSVEINYAIRFKTIDDVDIFLERLALHLWEKL 509 Query: 279 RSEHQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 R + R I+ + F S L T TQ I + Sbjct: 510 RDSNLMTRQITLKLMKRAQGAPVDPPKFMGMGKCDALSKVSNLGTNTQKFGTIASECKTL 569 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 + + G+ SEQ D + Sbjct: 570 FRILSVPPEEVRGIGIQFHRLTDSNQKVGQ---------KSEQREITTDLFRKR 614 >UniRef50_B3QD61 DNA-directed DNA polymerase n=6 Tax=cellular organisms RepID=B3QD61_RHOPT Length = 412 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 10/208 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQKD 60 D++AFYAS E P L GKPV V + G V A + EA+ GV+ P K Sbjct: 23 IIHVDMDAFYASVEQRDDPALRGKPVAVGGSRERGVVAAASYEARKFGVRSAMPSVTAKR 82 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 ++ +E+Y +S ++ E + +E S+DEA+ D+T ++N D Sbjct: 83 QCPD--LIFVKPRFEVYKAISQQIREIFAEHTAIIEPLSLDEAYLDVTENLQNIPLARDI 140 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 IRA + + T L GI+ K LAKLA+ K + + + E + L Sbjct: 141 ALAIRAKIKEVTGLNASAGISYNKFLAKLASDHRKPNGQY------VISPEMGPSFVEGL 194 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLA 207 PV GIG + K +A+GI+T D+ Sbjct: 195 PVGKFHGIGPATAAKFNALGIRTGSDIR 222 >UniRef50_A5BB36 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5BB36_VITVI Length = 500 Score = 198 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 95/245 (38%), Gaps = 14/245 (5%) Query: 9 AFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 AF + P+L KPV V +N+ + + N A+ GVK G K L Sbjct: 257 AFLSPVVIRXNPELQDKPVAVCHSNNPKGTAEISSANYPARDYGVKAGIFVRDAKALCPH 316 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIR 124 +V F N+E Y +++++ + L + +V+ S DEAF ++ D IR Sbjct: 317 --LVIFPYNFEAYEEVADQFYNILHKHCNKVQAVSCDEAFLEVMDS-KXGDPELLASIIR 373 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 + + T T GIA +A+LA +AK + +++ + LP+ + Sbjct: 374 KEIFETTGCTASAGIAGNLLMARLATRSAKPNGQCY------IPVDKVDDYLHQLPIKAL 427 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPT 243 GIG + +KL + T L +++ F + RG + Sbjct: 428 PGIGHVLEEKLRRRKVHTCGQLRMISKESLQRDFGTKTGDMLWNYCRGVDNRVVGVIQVI 487 Query: 244 KQEII 248 K Sbjct: 488 KDWFC 492 >UniRef50_B3RPL1 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3RPL1_TRIAD Length = 386 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 70/396 (17%), Positives = 128/396 (32%), Gaps = 58/396 (14%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++ FYA E L KPV + ++ N A+ GV P K + Sbjct: 5 IIHLDIDCFYAQVEMAKNSSLRNKPVGI--RQKHIIVTSNYPARERGVGKLIPLTKALEK 62 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD------ 115 +V + Y ++S +V L++ S +V DE + D+T + CR Sbjct: 63 CPDL-IVINGEDLTEYREVSFKVTDYLKKFSTKVHRLGFDENYIDVTELVQCRLNQFQGR 121 Query: 116 ----------------------------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + E+R + LT GIA K L+K Sbjct: 122 LFVGYLYQNSNTVKAQACDCNCRLRMIIGSQIAAEMRQGLWNVFSLTSSGGIAHNKMLSK 181 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 + + K + E L+ +L + + GIG + KL ++GI TV +L+ Sbjct: 182 IVSGLHKPNLQ------TAIYPEDTLDLLHSLELRKIAGIGSATNNKLQSVGITTVKELS 235 Query: 208 DTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + ++ HF + +G + + I SF T ++ Sbjct: 236 TLPLAVLKTHFPTPQACTLFQWCKGIDDSDVVAATKP-KSIGVEDSFSRCCTMIA-SKKR 293 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD----- 321 I +L ++ + + I Y S + + ++D Sbjct: 294 ISDLIRHLLSRLVDGCEHPQTVKLTIIKHD---RSSYKRESKQCSVPSTFYSTKDTDKKC 350 Query: 322 --IINAATRSLDAIWQAGHR--YQKAGVMLGDFFSQ 353 I++ L + + GV +F + Sbjct: 351 SIILDLMMNLLRKLVDIHKPFRLRLFGVTFTNFKDK 386 >UniRef50_C9KLN2 UV-damage repair protein n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KLN2_9FIRM Length = 499 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 80/487 (16%), Positives = 145/487 (29%), Gaps = 84/487 (17%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 F D+ +FYAS E V R D +VV + +A K+ GV F+ Sbjct: 6 FIAIDLKSFYASVECVERGLDPLTTNLVVADESRTEKTICLAATPAIKSYGVPGRARLFE 65 Query: 58 QKDLFRR-------------------------------CGVVCFSSNYELYADMSNRVMS 86 + + Y D S R+ Sbjct: 66 VIQKVKAANSMRRFYAPGRKLTGTSHDATELANNPNLAIDYIVAPPRMAFYMDYSARIYK 125 Query: 87 TLEELSP--RVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQT 142 + YSIDE F + + D G ++ VL+ T +T GI Sbjct: 126 VYLRYIAPQDIHTYSIDEVFINAAPYLGTYEMTAHDLGMKLMREVLKETDITATAGIGTN 185 Query: 143 KTLAKLANHAAKKWQR---QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 LAK+A K + L + +RKL + P+ D W +G+ ++KL MG Sbjct: 186 LYLAKIAMDIVAKHMPPDPDGVRIAALDEISYRRKLWAHTPLTDFWRVGKGYAEKLANMG 245 Query: 200 IKTVLDLADTD-----IRFIRKHFNVVLERTVRELRGEPC---LQLEEFAPTKQEIICSR 251 + ++ D+A + + + F V E + G ++ + P + + Sbjct: 246 LYSMGDIARRSLDAQGEKELYRVFGVNAELLIDHAWGYEPCTMEAIKAYRPASTSVSSGQ 305 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS--------------PF 297 T+ R + A + L ++ I I Sbjct: 306 VLHCPYTN-EQARLIVWEMADQMILDLVAKKLMTSQIVLDIGYDIENIAKGYTGPVHIDH 364 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 +V L + ++ +++ D I ++ + +G + A Sbjct: 365 YGRRVPKPAHGTVSLKKHSSSTKQLLHETLALYDRIVSPTLMVRRITITMGKLIDEDSAT 424 Query: 358 L--------NLFDDNAP-----------RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 +LF D + L M + K G+ + A ++ Sbjct: 425 KKNEDIVQFDLFSDTEKEAKESEAAEHAEQKEKSLQHAMIAIKNKFGKNAILKATNLKEE 484 Query: 399 QWQMKRA 405 + R Sbjct: 485 ARTIARN 491 >UniRef50_B5J6A6 ImpB/MucB/SamB family n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J6A6_9RHOB Length = 465 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 85/413 (20%), Positives = 145/413 (35%), Gaps = 33/413 (7%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D ++F+AS E P L G+PV V+ + IA + EAKALGVK K ++ Sbjct: 29 LYLDFDSFFASAEQHLNPYLRGRPVGVVPLDSLHTSCIAVSREAKALGVKSRTTIIKARE 88 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + V + +++Y + R++ +E P + SIDE C+L V Sbjct: 89 IIPDMIFVV--ARHDVYVRLHKRILDVIETCLPVTHVRSIDEVVCNLLRVEAAEG-EALA 145 Query: 121 REIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++ + LT +G+A T+ AK+A K + L ++ Sbjct: 146 LRLKTAIALAFSDVLTCSIGMAPTELRAKIAAELNKPNGFK------LLPAADMPDALAE 199 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQL 237 + + D+ GI + +L A + L + R + V ER L G Sbjct: 200 VDLCDLPGISEGMQARLKAAQVHNFTALWALAPKQARAIWGSVEGERFWNGLHGY----H 255 Query: 238 EEFAPTKQE-IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK--- 293 E PTK+ SR + + +R A +LR + ++ + Sbjct: 256 TERPPTKKSMFGHSRVLPKDWRNPEKVRVCARLLIESAGRRLRRANMRATKLTLSFRGGG 315 Query: 294 -TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS 352 S L D ++ + A + + VM+ Sbjct: 316 YRSAHESRRDDQNWGWEGNFLPARDDYAFLLALSDGLTWAEQHMAFQPRSVSVMIHGLIV 375 Query: 353 QGVAQLNLF----------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 +G +LF + A R E++ +MD + AK G L G Sbjct: 376 EGEFMTDLFAASPDAASGMSEAASRAKWEKVSDLMDNMRAKFGPHALSLGPPG 428 >UniRef50_P34409 DNA polymerase kappa n=6 Tax=Chromadorea RepID=POLK_CAEEL Length = 503 Score = 195 bits (496), Expect = 2e-48, Method: Composition-based stats. Identities = 82/406 (20%), Positives = 133/406 (32%), Gaps = 76/406 (18%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D++A++A+ E P L P+ V S+ + N A+ GV+ G P F L Sbjct: 86 VCIDMDAYFAAVEMRDNPALRTVPMAVGSS--AMLSTSNYLARRFGVRAGMPGFISNKLC 143 Query: 63 RRCGVVCFSSNYELYADMSN---------------------------------------- 82 +V NY Y +S Sbjct: 144 PSLTIV--PGNYPKYTKVSRQFSQIFMEYDSDVGMMSLDEAFIDLTDYVASNTEKKTFKR 201 Query: 83 --------RVMSTLEELSPRVEIYSIDEAFCD---------LTGVRNCRDLTDFGREIRA 125 + +E +E I+E+ C V + REIR Sbjct: 202 HRFGGDCPCWLPRFDENENTLEDLKIEESICPKCEKSRKIYYDHVEFGTGREEAVREIRF 261 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 V Q T LT GIA LAK+ + K + V ++ + + LP+ V Sbjct: 262 RVEQLTGLTCSAGIASNFMLAKICSDLNKPNGQY----VLENDKNAIMEFLKDLPIRKVG 317 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ 245 GIGR +L AM I+TV D+ + + E +R G P E P ++ Sbjct: 318 GIGRVCEAQLKAMDIQTVGDMNLKKNLYPLCFTPLSQESFLRTALGLPGRP-SESDPRRK 376 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH-QYCRFISTFIKTSPFALNEPYY 304 I R+F +D+ + + E +R + ++ +K S F + Sbjct: 377 SISVERTFS-PTSDFNILLEEHQEICRMLEEDVRKSGIVGGKTVTLKLKLSSFDV----- 430 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 + S+ + DI + L+ G + GV L Sbjct: 431 -LTRSLTPSDVVKSLEDIQKFSLELLEKE--KGKEIRLLGVRLSQL 473 >UniRef50_B7LX10 Protein impB n=4 Tax=Enterobacteriaceae RepID=B7LX10_ECO55 Length = 326 Score = 195 bits (495), Expect = 3e-48, Method: Composition-based stats. Identities = 149/265 (56%), Positives = 192/265 (72%), Gaps = 2/265 (0%) Query: 151 HAAKKWQRQTGGV-VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT 209 A K+W + +G V + N R KL+ PV +VWG+GRR+++KL+A+GI T L LA Sbjct: 63 WATKQWPQFSGVVALTAENRNRILKLLGLQPVGEVWGVGRRLTEKLNALGINTALQLAQA 122 Query: 210 DIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICS 269 + FIRK+F+V+LERTVREL GE C+ LEE P KQ+I+CSRSFGERITD +M QA+ Sbjct: 123 NTAFIRKNFSVILERTVRELNGESCISLEEAPPAKQQIVCSRSFGERITDKDAMHQAVVQ 182 Query: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 YA RAAEKLR E QYCR ++TF++TSPFA+ EP Y N+A KL PTQDSRDII AA R+ Sbjct: 183 YAERAAEKLRGERQYCRQVTTFVRTSPFAVKEPCYSNAAVEKLSLPTQDSRDIIAAACRA 242 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 L+ +W+ G+RY KAGVML DF G+AQ LFD+ PR SE+LM +D LN G+G + Sbjct: 243 LNHVWREGYRYMKAGVMLADFTPSGIAQPGLFDEIQPRKNSEKLMKTLDELNQS-GKGKV 301 Query: 390 YFAGQGIQQQWQMKRAMLSPRYTTR 414 +FAG+G +WQMK+ MLSP YTT+ Sbjct: 302 WFAGRGTAPEWQMKQEMLSPSYTTQ 326 >UniRef50_A9UXX3 Predicted protein (Fragment) n=2 Tax=Eukaryota RepID=A9UXX3_MONBE Length = 456 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 69/382 (18%), Positives = 120/382 (31%), Gaps = 65/382 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + CD +AFYA+ E +P L GKP+ G + + EA+ GV+ P + Sbjct: 90 VIVHCDADAFYAAVELRDQPHLRGKPI--GIGGIGMLSTASYEARKFGVRSAMPGYIALR 147 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L +V + Y S ++ + + + P S+DEA+ D+T D Sbjct: 148 LCPELILV--KPRFHAYEAASRQLQAVMAQYDPNFRSVSLDEAYLDITDYMARLTPGDVA 205 Query: 121 -------------------------------------------------REIRATVLQRT 131 ++R + + T Sbjct: 206 QLPPLTTVADPPLVQEANSADSKPGMATDSAGARNLTTLEGRALAARVVHQMRTRMHETT 265 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 LTV GIA + LAK+ + K + + ++ +P + GIG+ Sbjct: 266 QLTVSAGIACNRMLAKIGSDQNKPDGQFCLPA----DRAAILAFLANMPTRKIPGIGKVT 321 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 + L + I L + + +R G ++ I Sbjct: 322 EQILRELDITNCQALLQQRALLKLLFTPISFDFFMRSALGIASNN-TRKRSERKSIGHET 380 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 +F E + P + + A + + R + +KT F + + SV Sbjct: 381 TFRE-LNQVPDLEDKCLHLCHKTALDMERKALLGRSVCLKLKTVDFKVKQ------RSVL 433 Query: 312 LLTPTQDSRDIINAATRSLDAI 333 L T D I AA L Sbjct: 434 LPAHTADEPVIKRAALGLLHRE 455 >UniRef50_C5DV83 ZYRO0D04664p n=1 Tax=Zygosaccharomyces rouxii RepID=C5DV83_ZYGRO Length = 817 Score = 194 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 68/383 (17%), Positives = 134/383 (34%), Gaps = 30/383 (7%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGDPWFKQK 59 D + F+AS + D+ P+VV IA N EA+ G++ G + Sbjct: 228 VFHIDFDCFFASVSAMANGFDIHADPIVVCHGTKNSDIASCNYEARRYGIRNGMWVGTAE 287 Query: 60 DLFR-RCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNCRDLT 117 + +V +++ + MS R L + V SIDEA C + G + + Sbjct: 288 RMMPGGKRLVRLGYDFDQFELMSKRFYQILHDSQFQLVLPISIDEAVC-IAGNLSHMECD 346 Query: 118 DFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 + IR V T TV +G A + LA+LA +K + +L Sbjct: 347 SICQRIREHVSSVTNGCTVSIGCANSLVLARLALKWSKPNGYRIVNCDELD-----ATFW 401 Query: 177 SALPVDDVWGIGRRISKKLDAMG---IKTVLDLADTDIRFIRKHFN-VVLERTVRELRGE 232 S L +DD+ G+GR ++ K+ I + +L + +++ + + +RG+ Sbjct: 402 SNLKIDDLPGVGRSLAYKISEYSNPPIGNLCELRQMTLDSLQRCVGEKMGNKIYLAVRGK 461 Query: 233 PCLQ------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 + + ++ + ++G R + Q I +KL+ ++ Sbjct: 462 DDEESGKIIYDPKQFFQRKSLSIDINWGIRFDTIYEIDQFIDRCTQYLIDKLKELNKKTS 521 Query: 287 FISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 ++ I + + S +L PT + I + ++ Sbjct: 522 QLTLKIMKRSKDESIEPPKYLGMGKCDPFARSTRLGVPTDEFGIITTEIKSTFRSLCCPP 581 Query: 338 HRYQKAGVMLGDFFSQGVAQLNL 360 + + + Q L Sbjct: 582 KELRGIAIQFNKLENSVSNQSKL 604 >UniRef50_O48586 DNA-damage-inducible protein P n=6 Tax=Embryophyta RepID=O48586_ARATH Length = 689 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 75/466 (16%), Positives = 139/466 (29%), Gaps = 105/466 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E +P+L G P V+ G +IA + EA+ GVK + Sbjct: 13 VIAHVDMDCFYVQVEQRKQPELRGLPSAVVQYNEWQGGGLIAVSYEARKCGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADM--------SNRVMSTLEELSPR---VEIYSID 101 K + +V ++ LY S + + + E SID Sbjct: 73 AKAACPQIQLVQVPVARGKADLNLYRSAGSEVDGSGSYYYTVCVVSILAKSGKCERASID 132 Query: 102 EAFCDLTGVRNCRDLTD------------------------------------------- 118 E + DLT Sbjct: 133 EVYLDLTDAAESMLADAPPESLELIDEEVLKSHILGMNREDGDDFKESVRNWICREDADR 192 Query: 119 ----------FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 E+R VL+ T T GIA K LAKLA+ K Q+ + Sbjct: 193 RDKLLSCGIIIVAELRKQVLKETEFTCSAGIAHNKMLAKLASGMNKPAQQ------TVVP 246 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNV-VLERTV 226 ++L+S+LP+ + +G ++ L +G+ TV DL +++H+ V Sbjct: 247 YAAVQELLSSLPIKKMKQLGGKLGTSLQTDLGVDTVGDLLQFSETKLQEHYGVNTGTWLW 306 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEK----LRS 280 RG +++ + ++F + +++ + + +E+ L Sbjct: 307 NIARGISGEEVQGRLLP-KSHGSGKTFPGPRALKSLSTVQHWLNQLSEELSERLGSDLEQ 365 Query: 281 EHQYCRFISTFIKTSPF------ALNEPYYGNSASVKLLTPT----QDSRDIINAATRSL 330 + ++ + S S + +D+ ++ AA R Sbjct: 366 NKRIASTLTLHASAFRVPTSLSKDSDSHKKFPSKSCPMRYGVTKIQEDAFNLFQAALREY 425 Query: 331 --------DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 R V ++ +P Sbjct: 426 MGSFGIKPQGNKLETWRITGLSVSASKIVDIPSGTSSIMRYFQSQP 471 >UniRef50_Q6KZW2 DNA polymerase IV n=1 Tax=Picrophilus torridus RepID=DPO4_PICTO Length = 344 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 83/360 (23%), Positives = 141/360 (39%), Gaps = 28/360 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-----GCVIARNAEAKALGVKMGDPW 55 M L D + F+A E + P L GKPVVV + G V N EA+ALG+K G P Sbjct: 1 MIMLIDFDYFFAQVEEINDPSLKGKPVVVSVYSGRNERSGAVATSNYEARALGIKSGMPL 60 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 ++ ++ + V + Y S+++M + E S ++EI SIDEA+ D+ G Sbjct: 61 YRALEIGKN-RAVFLPIRKDFYQKYSDKIMDIISEYSEKMEIASIDEAYIDIDGNDCKIG 119 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 EI+ +L T + V +GI K +AK+A AK + + + + Sbjct: 120 ---IANEIKNRILNETGIKVSIGIGINKVIAKMAAEMAKPNGIK------CISADETGEF 170 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPC 234 ++ + ++D+ GIG+ +SK L+ +GI+ + D+ + D+ I+ + Sbjct: 171 LNNIKINDIPGIGKVLSKNLNEIGIEYLRDIKNFDVNKIKSILGESKTNYLYELYENKYF 230 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 +E K+ + E D + + A EK Q ++ Sbjct: 231 SPVEP--RVKKNFGRYLTLPENTRDIDKIVPYLKKSIDAAYEKAPGIPQEISVVAI---- 284 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 E S S +D I A I + ++ GV L Sbjct: 285 -----MEDLDIVSRSYTGNAIKRD-DSINIALNLLNKIISEDNRNIRRIGVRLSKISKNN 338 >UniRef50_Q4PCE3 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PCE3_USTMA Length = 1488 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 68/419 (16%), Positives = 129/419 (30%), Gaps = 73/419 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND----------------------GCVI 38 + D ++F+ + RPDL KPVVV + Sbjct: 524 VIMHIDFDSFFVAVGLKKRPDLKDKPVVVCHGTGFGLPAAKAGDENRPADNQSSSTSEIA 583 Query: 39 ARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIY 98 + + +A+ G++ G + K L V ++E Y +S + L E S ++ Sbjct: 584 SCSYKAREFGIRNGMSLGQAKRLC--SHVETIPYDFEAYNSVSLTFYTFLLEHSDALQAV 641 Query: 99 SIDEAFCDL---------------TGVRNCRDLT-----------DFGREIRATVLQRTH 132 S+DEA D+ + + RD R + R Sbjct: 642 SVDEALVDVSLLLQSMRDGDTNDGSLYQRYRDHLGSQGQVWTAEKQLAEAFRDEIRDRCE 701 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 +GI LA+LA AK + ++ ++AL VDD+ GIG + Sbjct: 702 CEASIGIGSNILLARLATRKAKPGGSFH------LTDDAKQLFLNALDVDDLHGIGWSLR 755 Query: 193 KKLDAM--GIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 ++ + I L+ T+ R + F + + G +L E +Q + Sbjct: 756 DRIRELFQTINIGEILSKTNKRRMMAEFGPKKGKMIWDRMHGIDADRL-EGNKLRQSVGS 814 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS---------PFALN 300 ++G R + +++ ++ R +S + F + Sbjct: 815 HVNYGIRFLTEQEAENFVTGMCQEVSQRAKAVKLRGRQVSVQVMVRAKTAPVEAPKFLGH 874 Query: 301 EPYYGNSASVKL----LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + S + D I AA + + + + L Sbjct: 875 GVCDTHHRSAPVSGPGGVAIDDEARIRAAAWPLIRDLKADPKELRGIAISLNKLEPADA 933 >UniRef50_D1R481 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R481_9CHLA Length = 271 Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 105/278 (37%), Gaps = 14/278 (5%) Query: 85 MSTLEELSPRVEIYSIDEAFCDLTGVRNC--RDLTDFGREIRATVLQRTHLTVGVGIAQT 142 M L S VE+ SIDEA+ D++ +++ +GR+++ VL+ T LT VGIA Sbjct: 1 MDILSRHSSLVEVVSIDEAYMDVSFLKDDPEMTAKQYGRKLKEAVLKNTGLTCSVGIASN 60 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 K +AK+A+ AK + ++ LP+ + GIG + K L + T Sbjct: 61 KLIAKIASSRAKPNGLYE------IPSGEEAAFLATLPIGAIPGIGSKTEKSLIDDRLYT 114 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 + DL D+ + + + G ++ + I +F + D Sbjct: 115 IADLQKIDLDTLIERYGTRGYYFYLAAHGIDKRPVDGEEYFPKSIGAETTFEADLADSTI 174 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + + + +A ++L+ R S ++ S F + S L + TQD + I Sbjct: 175 LLETLSELVQKACKRLKKYQTRTRGFSLKLRYSDFR------TVTRSRLLFSHTQDEQTI 228 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 A + + G+ L Sbjct: 229 WEEARDFFLKVHTKDVPLRLIGISLEKLSDGYWQPTLW 266 >UniRef50_Q7NUT5 UmuC protein n=1 Tax=Chromobacterium violaceum RepID=Q7NUT5_CHRVO Length = 301 Score = 193 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 111/295 (37%), Positives = 160/295 (54%), Gaps = 5/295 (1%) Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL--SNLERQRKLMSALPVDDVWGI 187 + + V VGI +KTLAKLANH AK+ GV D + LM+ LP VWG+ Sbjct: 9 QIGIPVSVGIGPSKTLAKLANHVAKRVAGWDDGVFDWSWLSPAETDALMARLPAGKVWGV 68 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 G R++ L I T L L D R+++++F+V LERT EL G CL LEE A +Q+I Sbjct: 69 GPRLAAGLAEKRIDTALKLKRADPRWLQRNFSVTLERTAAELNGVSCLSLEEAAQPRQQI 128 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 I SRSFGE+ +D + A+ + ARAAEKLR + R + +TSPF + + Sbjct: 129 ISSRSFGEKTSDLAVLSAAVSHHIARAAEKLREQGSAARLVGVSARTSPFGDDPYHGYT- 187 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 V L P+ D+ ++ AA L A+++ G RYQKAGV+L + + Q +LF AP Sbjct: 188 -VVPLAQPSDDTLELAAAALAGLRAVYRRGLRYQKAGVVLMELSPRERRQADLFA-AAPD 245 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 P ++LM +D +N G + A + + W+M++ SP YTTR L + Sbjct: 246 PRRQRLMRTLDAINRAYGHSCVKLASEALTPNWEMRQDQRSPCYTTRFDQLPTAR 300 >UniRef50_A8ND78 ImpB/MucB/SamB family protein n=1 Tax=Brugia malayi RepID=A8ND78_BRUMA Length = 715 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 59/378 (15%), Positives = 122/378 (32%), Gaps = 62/378 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG------CVIARNAEAKALGVKMGDPW 55 D++ F+ S P+L GKPV + + + + + EA+ GV+ G Sbjct: 222 ICHIDLDCFFVSVALRTHPELIGKPVAITHSRGTEGAGMSEIASCSYEARXRGVRNGCFI 281 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR---N 112 + + + ++C ++ Y +S + + L + + S DE + DL + + Sbjct: 282 KEARKVCPD--LICLPYQFDDYRHISKEIYAVLSGYTLSIRAVSCDEMYVDLESLCKEMH 339 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 ++ + IR+ +L +T VGI T +A++A AK + + Sbjct: 340 IANVMEIISVIRSEILTKTGCNASVGIGNTMLIARIATRHAKPNGQF------MIKXGDI 393 Query: 173 RKLMSALPVDDVWGIGRRISKKLD-AMG-IKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 +L+ + + GIG I KL A G + DL I ++ Sbjct: 394 DELIKKEKISSLPGIGYNICAKLKNAFGEMNLCEDLQKVPINRLQNVLGEK--------- 444 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 I T + + + + +KL I+ Sbjct: 445 ----------------IG---------TQEDEVMEFLGKMCSELEKKLHIARMTASTITL 479 Query: 291 F---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQ 341 + T + + + + T + + A + + AI + Sbjct: 480 RLLIRASDAPLVTEKYLGCGKCDAITRTAHVNGATANKAVLHAEAKKLMKAINPIISDLR 539 Query: 342 KAGVMLGDFFSQGVAQLN 359 G+ L ++ Sbjct: 540 GIGIQLTHLNEIPNISVD 557 >UniRef50_A8ZS28 DNA-directed DNA polymerase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS28_DESOH Length = 401 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 74/397 (18%), Positives = 127/397 (31%), Gaps = 20/397 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 +V F + E L +PV++ V + EA A G++ G P Sbjct: 10 IIHINVAHFAVTVEQTLDARLRDRPVLIAPAGAARTPVYDMSQEAFASGIRKGMPVAGAL 69 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE-AFCDLTGVRNCRDLT- 117 R C VV Y + +P VE S D F D+TG Sbjct: 70 KACRDCKVVPLYP--ARYERAMQTIAKYAGAYTPVVEQGSGDGHLFLDVTGTSRLFGPPP 127 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D + + + L +A K +AK+A K + + + Sbjct: 128 DIAWRLERQIKKDFGLAPAWSVAANKLVAKVATRLVKPVGEY------IVCPGDEAPFLE 181 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 LP+ + G+ R I V L + ++ F+ + +RG + Sbjct: 182 PLPLGILPGVERSDLDAFAMYHIGRVNQLRPWSLAQLQVAFDTRAQFLFDTIRGIDLSAV 241 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + F E M Q + + LR+ ++ R + S Sbjct: 242 TSGREKEPTVAMEHEFSEDTNQRDQMEQVLYGLVEKGGRALRARQRFARIAGVVVDYSDG 301 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + V + PT + + AA R+L R + ++L Q Sbjct: 302 R------RCARQVSIAPPTANDPALFEAARRALSLAVVRRVRVRYIRLVLRRLL-FPPVQ 354 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 L+LFD + +L+T MD + +K G +Y Sbjct: 355 LDLFDH-DRQERQTRLLTAMDNIRSKFGDSAIYPGRM 390 >UniRef50_Q5Q9H1 Polymerase kappa isoform 8 n=14 Tax=Eumetazoa RepID=Q5Q9H1_MOUSE Length = 547 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 67/418 (16%), Positives = 120/418 (28%), Gaps = 91/418 (21%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALG------------- 48 D++AFYA+ E P+L KP+ V S + N A+ G Sbjct: 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGSM--SMLATSNYHARRFGVRAAMPGFIAKRL 159 Query: 49 ------VKMGDPWFKQKDLFRRCGVVCFSSNYELY-----------------------AD 79 V ++ + + + N+ Sbjct: 160 CPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAXLNITQHLQERQDWPEDKRR 219 Query: 80 MSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL----------------------- 116 ++ + L+ +PR E + E ++ + Sbjct: 220 YFIKMGNYLKIDTPRQEANELTEYERSISPLLFEDSPPDLQPQGSPFQLNSEEQNNPQIA 279 Query: 117 ----------TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL 166 + +EIR + Q+T LT GIA LAK+ + K + L Sbjct: 280 QNSVVFGTSAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQ----IL 335 Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 + + LP+ V GIG+ K L A+GI T +L + Sbjct: 336 PSRSAVMDFIKDLPIRKVSGIGKVTEKMLMALGIVTCTELYQQRALLSLLFSETSWHYFL 395 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 G L ++ + R+F E I+ A A L+ E R Sbjct: 396 HIALGLGSTDLA-RDGERKSMSVERTFSE-ISKTEEQYSLCQELCAELAHDLQKEGLKGR 453 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQK 342 ++ +K F + + + + + +I A L + H + Sbjct: 454 TVTIKLKNVNFEVK------TRASTVPAAISTAEEIFAIAKELLRTEVNVGSPHPLRL 505 >UniRef50_C6HJM8 DNA damage repair protein Mus42 n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HJM8_AJECH Length = 1111 Score = 190 bits (482), Expect = 9e-47, Method: Composition-based stats. Identities = 53/380 (13%), Positives = 104/380 (27%), Gaps = 88/380 (23%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+A+ P+L +PV + + + N A++ G+K G Sbjct: 364 ILHVDFDSFFAAVSLQKHPELVDQPVAIAHGTGPGSEIASCNYPARSFGIKNGMWMKGAL 423 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC------ 113 + + ++ Y + S + + + V+ SIDEA D+T + Sbjct: 424 QMCP--NLKVLPYDFAAYEEASRKFYDVILSIDAVVQSVSIDEALVDITNLCQDAVGSRG 481 Query: 114 ------------RDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTG 161 + +++R +V ++T + VGI A++A AK + Sbjct: 482 RDISEDSIWREQEKADEIAQKLRDSVKEQTGCNISVGIGGNVLQARVALRKAKPAGQFQ- 540 Query: 162 GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV 221 + + L V D+ +G Sbjct: 541 -----LKPDAVLDFIGTLAVKDLPEVG--------------------------------- 562 Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 EI +G R + + + S +L Sbjct: 563 --------------FHPPRKSVSAEIS----WGIRFVNQAQAEEFVQSLCDELHRRLVEN 604 Query: 282 HQYCRFISTFIK---------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 + ++ I + + SV L T S I A L Sbjct: 605 LVKGKQLTMRIMKRSADAPLEPVKHLGHGKCDTFNKSVNLGVATNASDIIGREAISILRG 664 Query: 333 IWQAGHRYQKAGVMLGDFFS 352 + + GV + Sbjct: 665 FKFSPGDLRGLGVQMTKLEP 684 >UniRef50_UPI00017E10E6 DNA-directed DNA polymerase eta n=2 Tax=Apocrita RepID=UPI00017E10E6 Length = 753 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 67/388 (17%), Positives = 127/388 (32%), Gaps = 81/388 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND---GCVIARNAEAKALGVKMGDPWFK 57 + L D++ F+ ET +P+ GKP+ V+ N G +IA N EA+ GV + Sbjct: 8 IVVLIDMDCFFCQVETRLKPEHAGKPLAVVQYNQWKLGGIIAVNYEARDFGVTRHMRGEE 67 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR- 111 K+ + ++ Y V+ L++ VE S+DEA+ D+T + Sbjct: 68 AKEKCPDIVLAIVPSQRGKADTSRYRSAGREVIDVLKKYCNIVERASVDEAYLDITQIVD 127 Query: 112 -----------------------------------NCRDLTDFGREIRATV--------- 127 + L D+ E+ + Sbjct: 128 DKLSKEIIDSDSISKQLENSYIVGFSESDINNEEQRSKGLQDWLSELADDIQIQRLAIAG 187 Query: 128 ----------LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 T GI+ K LAKLA K ++ + +L Sbjct: 188 AFVEHIRKEVYDTTGFRCSAGISFNKILAKLACGLHKPNRQ------TILPASAVPELYG 241 Query: 178 ALPVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCL 235 +LPV V +G ++ +D++ + DL +++++ F RG Sbjct: 242 SLPVKKVRNLGGKLGDMVIDSLKCNVMADLLPYSLQYLQNRFDEKTGMWLYNIARGIDSE 301 Query: 236 QLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEK----LRSEHQYCRFIS 289 + + I + F + I + ++ I +A E+ L + + Sbjct: 302 PVTP-RLVSKSIGACKRFPGKQAIVELDVLKHWIGELSAEVCERLEQDLEENERKASQLI 360 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + ++ S +V L + Q Sbjct: 361 VSFQYC---QDKKLVSQSRTVALTSYKQ 385 >UniRef50_P12689 DNA repair protein REV1 n=7 Tax=Saccharomyces cerevisiae RepID=REV1_YEAST Length = 985 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 73/424 (17%), Positives = 137/424 (32%), Gaps = 45/424 (10%) Query: 1 MFALCDVNAFYASCETVFRP------DLWGKPVVVLSNNDGCVIA-RNAEAKALGVKMGD 53 + D + F+A+ + R D P+VV IA N A++ G+K G Sbjct: 357 IIFHIDFDCFFATVAYLCRSSSFSACDFKRDPIVVCHGTKNSDIASCNYVARSYGIKNGM 416 Query: 54 PWFKQKDLFR-RCGVVCFSSNYELYADMSNRVMSTLEE--LSPRVEIYSIDEAFCDLTGV 110 + + + ++ +E + S STL+ + + SIDEA C Sbjct: 417 WVSQAEKMLPNGIKLISLPYTFEQFQLKSEAFYSTLKRLNIFNLILPISIDEAVCVRIIP 476 Query: 111 RNCRDLT----DFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 N + EIR + Q T TV +G + + LA+LA AK + Sbjct: 477 DNIHNTNTLNARLCEEIRQEIFQGTNGCTVSIGCSDSLVLARLALKMAKPNGYNITFKSN 536 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDA--MGIKTVLDLA-DTDIRFIRKHFN-VV 221 LS S+ +DD+ G+G +L++ ++ DL + ++ + Sbjct: 537 LSEE-----FWSSFKLDDLPGVGHSTLSRLESTFDSPHSLNDLRKRYTLDALKASVGSKL 591 Query: 222 LERTVRELRGEPCLQ------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + L+G+ + + ++ + ++G R + + I Sbjct: 592 GMKIHLALQGQDDEESLKILYDPKEVLQRKSLSIDINWGIRFKNITQVDLFIERGCQYLL 651 Query: 276 EKLRSEHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 EKL ++ I+ + + S S +L PT + I Sbjct: 652 EKLNEINKTTSQITLKLMRRCKDAPIEPPKYMGMGRCDSFSRSSRLGIPTNEFGIIATEM 711 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL-----FDDNAPRPGSEQL-MTVMDTL 380 + + + G L F E L V + + Sbjct: 712 KSLYRTLGCPPMELRGLALQFNKLVDVGPDNNQLKLRLPFKTIVTNRAFEALPEDVKNDI 771 Query: 381 NAKE 384 N + Sbjct: 772 NNEF 775 >UniRef50_UPI0000D56959 PREDICTED: similar to DNA polymerase iota n=1 Tax=Tribolium castaneum RepID=UPI0000D56959 Length = 537 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 72/401 (17%), Positives = 133/401 (33%), Gaps = 54/401 (13%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++ FYA E P L P+ + V+ N A+ G+K + K L Sbjct: 11 IIHIDLDCFYAQVEMNKNPSLRTVPLGI--QQKNIVVTSNYTAREFGIKKCMLIPEAKKL 68 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT------------- 108 +V + Y S +V + L++ +P VE +DE + D+T Sbjct: 69 CPSLVLVNGE-DLHDYRQTSYKVTNLLQKYTPLVERLGLDENYLDVTTLINEKLNQKSDL 127 Query: 109 -----------------GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 T +EIR + +LT GIA K LAK+A Sbjct: 128 KLVGNVFGDTSDKCECGCTERLIIATTVAQEIRDVIKSELNLTSCAGIAHNKLLAKIAGA 187 Query: 152 AAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLDAMGIKTVLDLADTD 210 K Q+ + +L+ +L +D+ GIGR + ++L +G++T+ +L + D Sbjct: 188 RHKPNQQ------TVVFPNSALELILSLNAPNDIPGIGRALFEQLKCIGVETIEELQNVD 241 Query: 211 IRFIRKHFNVVLERTVREL-RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICS 269 ++ + + V EL G ++ Q I S I+ ++ + Sbjct: 242 LKRLETVLGQDKAKLVHELSLGIDKSGVKPTGKP-QSIGLEDSC-RSISVETEVKIKLEQ 299 Query: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY-YGNSASVKLLTPTQD------SRDI 322 R + + + + I ++ F + + + + I Sbjct: 300 LLNRLLLLVEEDGRVPKTIKLTVR--KFNKDNKMSHRETRQCNVNPSIFSSSQPNKEAKI 357 Query: 323 INAATRSLDAIWQAGHR--YQKAGVMLGDFFSQGVAQLNLF 361 + + I G+ F L F Sbjct: 358 MTTIMHLFNRIIDVKKPYHITLLGLSFTKFQEPPKNTLASF 398 >UniRef50_B7FT83 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FT83_PHATR Length = 460 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 75/376 (19%), Positives = 139/376 (36%), Gaps = 42/376 (11%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 D++ FY +CE + RP+L +P V N ++ N A+ GV+ + L Sbjct: 82 VDMDMFYMACELLERPELASEPACVGEN---MILTSNYLARKYGVRSAMAGWIGDRLVEE 138 Query: 65 C-----GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD---- 115 ++ S ++LY S++V + L + P + YS+DEA+ DL + Sbjct: 139 LSSGTKKLIHVPSRFDLYRTKSHQVRNVLSQYDPHLRCYSLDEAYMDLAPYLALKLTRNW 198 Query: 116 ----------LTDFGREIRATVLQRTH-LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV 164 + +++R+ V + T LT G+A L+K+A+ K + Sbjct: 199 DHERISAVLAGSQVLQDMRSRVTEVTGGLTCSAGLAPNFLLSKIASDRNKPNGQCLVPS- 257 Query: 165 DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER 224 + E + LP V GIGR +K L + GI TV DL E Sbjct: 258 ---DHESIIGFLHPLPTRKVSGIGRVTAKILSSFGIATVADLYRERSLVRFLFQEASAEF 314 Query: 225 TVRE---LRGEPCLQLEEFA----PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 +R G ++ P ++ I R+F + + ++ + A + Sbjct: 315 LLRASIGCSGSDERNADDVETDDGPGQKGISRERTFAAK-ESWTAINLKLEEIAELLSSD 373 Query: 278 LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA- 336 ++ ++ + ++ +K F S S+ Q + D+ A L + Sbjct: 374 MKHKNIFAHTVTVKVKLRSFD----CLSRSRSLGRGVFIQAAADLRPIALDLLRELKDEF 429 Query: 337 --GHRYQKAGVMLGDF 350 + G+ F Sbjct: 430 SGSFAVRLLGIRCSSF 445 >UniRef50_B8C7E7 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana RepID=B8C7E7_THAPS Length = 444 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 66/302 (21%), Positives = 111/302 (36%), Gaps = 15/302 (4%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 D++ F+ SC + P L P V + N A+ GV+ P + L + Sbjct: 141 IDMDGFFISCHILSLPHLAHIPACVGGT--SMISTSNYAARKYGVRAAMPGYLGSTLVKE 198 Query: 65 C-----GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN--CRDLT 117 + S+++LY S V + LEE P + +YS+DEA+ D+ Sbjct: 199 LSGGKETLTFVKSDFDLYKRKSGEVRAVLEEYDPNLSMYSLDEAYMDIGPYLKILLSTAQ 258 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 IR V T LT G+A LAK+A+ K + G + + Sbjct: 259 QLLNSIRQRVKNATGLTCSAGLASNFLLAKVASDVNKPNGQCFVGS----SEAEILAFAN 314 Query: 178 ALPVDDVWGIGRRISKKLDAMG-IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 L + + GIGR K L + ++TV DL D +R G Sbjct: 315 PLSIRKISGIGRVTEKMLRGVCEVETVKDLYDHRAEVYFLFKPASANLMMRASIGYAETG 374 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 A T++ I R+F + + + + + L+ + + I+ +K + Sbjct: 375 KHHEATTRKGISHERTFS-PTSSWSDLCNKLETIVQALVHDLKQRNLKPKTITLKVKLAN 433 Query: 297 FA 298 F Sbjct: 434 FD 435 >UniRef50_Q7QBI8 AGAP003157-PA (Fragment) n=3 Tax=Culicidae RepID=Q7QBI8_ANOGA Length = 696 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 71/406 (17%), Positives = 122/406 (30%), Gaps = 66/406 (16%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ +YA E V P L KP V CV+ N A+ G+K P + Sbjct: 17 VIIHIDMDYYYAQVEEVLNPSLKDKPFAV--KQRFCVVTSNYIAREKGIKKLQPVKEALA 74 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT------------ 108 ++ + Y MS R+ + +P VE +DE + DL Sbjct: 75 ACPELVLLNGE-DITKYKAMSVRINEIMHRFTPHVEKLGLDENYLDLDFVQGFIHPPRTD 133 Query: 109 -------------------------GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 R T +EIR + Q L GIA K Sbjct: 134 ESSALDPPSHRETDRDLFRRCCCCGCDRRLILATHLAQEIRDCIFQELGLRCCAGIAHNK 193 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLD-AMGIK 201 LAKL K+ ++ + +++L V + GIG + ++ L + GI Sbjct: 194 LLAKLVGAVHKQNKQ------TVLLPTHATAFVASLGSVRSLTGIGEKTAQTLADSCGIS 247 Query: 202 TVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 TV DL ++ + KH R + G + + + + S I+ Sbjct: 248 TVTDLQCIELDRLTKHLGYEQAVRLKQLALGRDDTVVRQTGKP-KSVGLEDSCPS-ISVR 305 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS- 319 R + + + + I ++ + S KLL Sbjct: 306 ADAEDKFRHLLVRLVKNIADDGRVPIAIKVTVRKYD-LAKRTTHRESKQDKLLPSMFRHV 364 Query: 320 -----------RDIINAATRSLDAIWQAGHR--YQKAGVMLGDFFS 352 I+ + + + G+ F Sbjct: 365 GGRLVLADGAQEKILTIVMKVFERMVDLRQPFNITLLGLSFFKFQE 410 >UniRef50_C0WCL1 DNA-repair protein n=1 Tax=Acidaminococcus sp. D21 RepID=C0WCL1_9FIRM Length = 495 Score = 187 bits (474), Expect = 8e-46, Method: Composition-based stats. Identities = 80/465 (17%), Positives = 141/465 (30%), Gaps = 63/465 (13%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E V R D +VV ++ +A + K GV F+ Sbjct: 23 YICIDLKSFYASVECVDRGLDPLDTCLVVADKSRSDRTICLAVSPPLKKRGVPSRPRLFE 82 Query: 58 QKDLFRRCG-------------------------------VVCFSSNYELYADMSNRVMS 86 + + Y +MS + Sbjct: 83 VIRKVDEINALRRSKAPQRSFRGMSHFDSQLRHHPEKALSYIVAMPRMQRYIEMSRDIYG 142 Query: 87 TLEELSP--RVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQT 142 + + +YSIDE D T + + V Q+T +T GI Sbjct: 143 IYLQYIAPQDIHVYSIDEVMIDATPYLSTYGMTPYTLAMTMIRDVYQKTGITATGGIGTN 202 Query: 143 KTLAKLANHAAKKW---QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 L+K+A K + L +R L P+ D W IG +++L A G Sbjct: 203 LYLSKVAMDIVAKALMPDPYGVRIAFLDETAYRRTLWGHQPLTDFWRIGPGSARRLSAHG 262 Query: 200 IKTVLDLADTD---IRFIRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQEIICSRSF 253 + T+ D+A + F + E + G ++ + P + S+ Sbjct: 263 LYTMGDIARLSLSDASLLYDWFGINAELLIDHAWGWESCRMSDIKRYIPKASSLGTSQVL 322 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP-----FALNEPYYGNSA 308 + + R L + ++ I F+ + P G S Sbjct: 323 PKP-YSPENARLIAWEMTDELILDLARKRLVTDEVAITIGYERTQPQGFSRDLPPSGRSH 381 Query: 309 -SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ----GVAQLNLFDD 363 S +L T + I+ + D + ++ V SQ V Q LF + Sbjct: 382 GSARLAGWTHAGQPIMASMMALYDRLAHPYLWVRRMSVTAVHVRSQDIQDPVRQGFLFAE 441 Query: 364 N----APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 P +L ++ + GR L ++ + R Sbjct: 442 QTPLLDGDPREARLQEAALEVHHRFGRNALVKGRNLCKEAMTITR 486 >UniRef50_UPI000180D06B PREDICTED: similar to GH15415 n=1 Tax=Ciona intestinalis RepID=UPI000180D06B Length = 593 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 47/242 (19%), Positives = 102/242 (42%), Gaps = 12/242 (4%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE 96 + + + EA+A G++ G + + K+L ++ ++E Y D+S ++ + L + +E Sbjct: 361 IASCSYEARAAGLRNGMFYGRAKELCPD--LIAIPYDFEAYKDISQKLYTVLASYTQSLE 418 Query: 97 IYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 S DEA D+T + + IR +L T GI LA++A K Sbjct: 419 AVSCDEALLDVTQLVEDTSLTPQVIAQNIRGKILDATGCNASAGIGPNIALARMATRLGK 478 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + L++ + + LPV D+ G+GR + +L +G T +L + Sbjct: 479 PNGQHE------VTLQQAEEFIRDLPVKDLPGVGRATASRLRELGASTCGELQKIHPDLL 532 Query: 215 RKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 +K F ++ +G ++ + ++ + ++G R+ M+ + + + Sbjct: 533 KKEFGNKTGQKLHELSKGIDEREV-CQSKERKSVSADVNYGIRLKTEDEMKTFLNNLSNE 591 Query: 274 AA 275 + Sbjct: 592 VS 593 >UniRef50_Q9VHV1 DNApol-iota, isoform A n=12 Tax=Drosophila RepID=Q9VHV1_DROME Length = 737 Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats. Identities = 69/410 (16%), Positives = 123/410 (30%), Gaps = 71/410 (17%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++ FYA E + P L K + + V+ N A+A GV + + + Sbjct: 17 IIHLDMDYFYAQVEEIRDPTLRSKALGI--QQKNIVVTCNYVARAKGVTKLMLIAEAQRI 74 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR---------- 111 +V + Y MS R+ L +P VE DE F D+T + Sbjct: 75 CPDLVLVNGE-DLAPYRQMSQRIFDLLLNYTPLVEKLGFDENFMDVTALVELRQAHVAEA 133 Query: 112 --------------------------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 T +EIR + R +T GIA K L Sbjct: 134 LLRPPVGHTYPADGTPLSNCDCGCAQRLAIGTRIAQEIREELKLRLGITCCAGIAYNKLL 193 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL-PVDDVWGIGRRISKKLDAMGIKTVL 204 AKL + + Q+ + + M L + V GIG++ L G+ +V Sbjct: 194 AKLVGSSHEPNQQ------TVLVSTYAEQFMRELGDLKRVTGIGQKTQCLLLEAGMSSVE 247 Query: 205 DLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 L D+ +RK F R G + + I + + I+ + Sbjct: 248 QLQQCDMDVMRKKFGFETATRLRDLAFGRDTSLVRPSGKP-KTIGMEDAC-KPISVRTDV 305 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS---- 319 + R E++ + + I ++ + + + + +L + Sbjct: 306 EERFRMLLKRLVEQVAEDGRVPIAIKVVLRKFD-SQKKSSHRETKQANILPSLFKTSMCP 364 Query: 320 ---------------RDIINAATRSLDAIWQAGHR--YQKAGVMLGDFFS 352 ++ R + I G+ F Sbjct: 365 GETGVSKVQLADGAQDKLLKIVMRLFERIVDMSKPFNITLLGLAFSKFQE 414 >UniRef50_O17219 Polh (Dna polymerase eta) homolog protein 1, confirmed by transcript evidence n=3 Tax=Caenorhabditis RepID=O17219_CAEEL Length = 584 Score = 184 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 75/459 (16%), Positives = 143/459 (31%), Gaps = 99/459 (21%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALGVKMGDPWF 56 + +L D++ FYA E P LWG+PV+V+ ++ G ++A + EA+ GVK G Sbjct: 4 VISLIDMDCFYAQVEQRDNPSLWGQPVIVVQHSRQGIEGGILAVSYEARPFGVKRGMTVA 63 Query: 57 KQKDLFRRCGVVCFS-------SNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDL 107 + K + + ++ + Y D S V L + +E S+DEAF DL Sbjct: 64 EAKLKCPQISICHVPIGEYVDKADIQKYRDASAEVFRVLNNYDSQIIIEKASVDEAFLDL 123 Query: 108 TGVRNC--------RDLTDFGR---------------------EIRATVL---------- 128 + N L +F + +R VL Sbjct: 124 SAYTNQKLQELRENEGLEEFLQAAITYLPTTHLATGEDVKENEHLREDVLLEYIENARNC 183 Query: 129 ---------------------QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + T G+ K +AKL K Q+ L Sbjct: 184 TENLLLLIAAVTVEQIRQQIHEETQFFCSAGVGNNKMMAKLVCARHKPRQQ------TLI 237 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAM-GIKTVLDLADTDIRFIRKHFNVVLERTV 226 R+++ P+ DV G G ++ ++ M I + +L + DI + + F E Sbjct: 238 PWFYVREILRLTPIGDVRGFGGKMGNRIQEMLNITLMGELLEVDISQLIETFPNQHEYLR 297 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEKLRSEHQY 284 G + I S++F + I +++ + A++L ++ Sbjct: 298 SVAEGHCDEPVRPRK-ESSSIAVSKNFPGKLSIRSVLELKKWLDGLTKELAKRLATDQAE 356 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW---------- 334 + + + S + L + + ++ + Sbjct: 357 NKRTAENLVYSLLTEDGKP-----QKTLKITSYHPDTLFEQIWAAMKGLNKTNATKNEDS 411 Query: 335 -QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 + F AQ + + + Sbjct: 412 GPWTPPILNISLSATRFQPGIPAQNRSIHEWLYEKKTRK 450 >UniRef50_D2RJB9 UMUC domain protein DNA-repair protein n=4 Tax=Bacteria RepID=D2RJB9_ACIFE Length = 493 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 78/482 (16%), Positives = 138/482 (28%), Gaps = 78/482 (16%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWF 56 ++ D+ +FYAS E V R D +VV + +A + KA G+ F Sbjct: 5 VYGAIDLKSFYASVECVERGLDPLDACLVVADRSRTDRTICLAVSPALKAWGIPGRPRLF 64 Query: 57 KQKDLFRRCG-------------------------------VVCFSSNYELYADMSNRVM 85 + + + + Y + S +V+ Sbjct: 65 EVIRQVEEMNALRRASLRGRSFTGRSYLASRLDRDKSLEVAYITAMPHMQRYMEKSAQVL 124 Query: 86 STLEELSP--RVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRTHLTVGVGIAQ 141 + + +YS+DE DLT RE+ VL+ T +T GI Sbjct: 125 QIYLQFMAPEDIHVYSVDEVLLDLTPYLKSGGWTPHGLVREMIRQVLRETGITATAGIGT 184 Query: 142 TKTLAKLANHAAKKWQ---RQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 L K+A K + L+ ++ L P+ D W IG I++KL Sbjct: 185 NLYLCKVAMDIVAKHMEPDPDGVRIAALTERTYRQLLWDHCPMTDFWRIGPGITRKLQQY 244 Query: 199 GIKTVLDLADTD---IRFIRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQEIICSRS 252 G+ T+ +A + F V E + G + + P + + Sbjct: 245 GMYTMGAVARMSLEDPDLLYHLFGVNAELLIDHAWGWEPCTLQDIRTYEPRSSSLGSGQV 304 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS----------------- 295 + T R + A A L +H+ + + Sbjct: 305 LQQPCT-AEKARLLVWEMADLLALDLTKKHRVTDQLVMTLGYDRCNLEDPERRRSYRGKV 363 Query: 296 --PFALNEPYYGNSASVKLL-TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF- 351 S L T + I D I +K + Sbjct: 364 TADHYGRPVPVHAHGSRNLPGGYTASGQVIRQETLALFDRIADPHLLIRKISLNAEHVRN 423 Query: 352 ----SQGVAQLNLF----DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 + +LF R +QL + ++ ++ G+ L +Q + Sbjct: 424 PESLPVLRGETDLFVREPGPVYVRGREDQLQETILSIQSRYGKNVLLRGSNLLQGAMTRE 483 Query: 404 RA 405 R Sbjct: 484 RN 485 >UniRef50_B9KDE6 UV damage repair protein, ImpB/MucB/SamB family n=7 Tax=Bacteria RepID=B9KDE6_CAMLR Length = 488 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 77/473 (16%), Positives = 148/473 (31%), Gaps = 75/473 (15%) Query: 1 MFALCDVNAFYASCET-VFRPDLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++A D+ +FYAS E + D ++V ++A + K + F Sbjct: 5 LYASIDLKSFYASVECILRNLDPLTTNLIVADKERTDKTIILAISPALKTYNIPSRLRLF 64 Query: 57 KQKDLFR-------------------------------RCGVVCFSSNYELYADMSNRVM 85 + K + + Y + S ++ Sbjct: 65 EFKQKIHLLNKERLKQSKKHIFKAKSFNINELNKDINLEIDYIIAKPSMATYIEFSAKIY 124 Query: 86 STLEELSP--RVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQ 141 S + + +YSIDE F DL+ + + ++ +L + GI Sbjct: 125 SIYLKYFDPKDIHVYSIDEVFIDLSSYLDKYKLSAYELLTKVLLDILHTCKIIATAGIGT 184 Query: 142 TKTLAKLANH-AAKKWQRQTGG--VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 LAK+A AK+ + G + L + K+ + P+ D W IG+ I+ KL+ + Sbjct: 185 NLYLAKIAMDILAKRQKIDENGLLIAFLDEKLYKYKMWAHKPLKDFWRIGKGIALKLENL 244 Query: 199 GIKTVLDLADTD---IRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 I T+ DLA + KHF + E + G +++ + S+ + Sbjct: 245 NIYTMGDLARFSLNNEALLYKHFGINAELLIDHAWGIETCTMKDIKN-YKSQNHSKIMAK 303 Query: 256 RI---TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS----------------P 296 + D+ + + +L + I+ I+ Sbjct: 304 VLPFAYDHNQAIKVLKELIDHLTLELIKHNLKTNHITLDIQYDKSNLENLNSYKGFIIKD 363 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFS---Q 353 AS+ L T + I + I +K + L + + + Sbjct: 364 DYGRNIPKNAHASINLENYTNSLKLINKKSLELFYKIIDKNLSIRKISLSLNNITTNAQE 423 Query: 354 GVAQLNLFDD-------NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +LNLF D E+L + K G+ + A + Sbjct: 424 NFQELNLFSDLNEILQEQHQLAKEEKLQKARLQIMHKFGKNAILKASSLDNET 476 >UniRef50_C2KWD3 ImpB/MucB/SamB family DNA-damage repair protein n=2 Tax=Bacteria RepID=C2KWD3_9FIRM Length = 562 Score = 183 bits (465), Expect = 9e-45, Method: Composition-based stats. Identities = 82/490 (16%), Positives = 133/490 (27%), Gaps = 86/490 (17%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYASCE R D +VV +A + KA GV F+ Sbjct: 39 YMAIDLKSFYASCECRERGLDPMDAYLVVADGERTEKTICLAVSPALKAYGVPGRARLFE 98 Query: 58 QKDLFRRCGV-------------------------------VCFSSNYELYADMSNRVMS 86 + R+ + LY S RV Sbjct: 99 VVEKVRKINYQRSKLYGGQPLVGKSCFDSDCKAYPFLAVNYITAPPRMALYMAYSRRVYE 158 Query: 87 TLEELS--PRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQT 142 E + +YS+DE F DL EI V + + VG+ + Sbjct: 159 VYLEFVSKEDIHVYSVDEVFMDLKPYERIYQKSSRVLAEEICRRVYEEVGMIATVGLGEN 218 Query: 143 KTLAKLANHAAKKWQRQ---TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 LAK+A K + + L+ + L P+ D W IGR I +L G Sbjct: 219 LYLAKVAMDIEAKHMQASKEGIRLAMLTEQSYRESLWQHKPLHDFWRIGRGIENRLAHYG 278 Query: 200 IKTVLDLA---------DTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 I T+ D+A + + K F + E + G ++E+ S Sbjct: 279 IYTMGDIAMAALSGSKEKKNQALLYKLFGIQAELLIDHAFGYETCRIEDIKA-FHSKSNS 337 Query: 251 RSFGERITDY---PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS------------ 295 G+ + R A A L + + F+ ++ Sbjct: 338 LHSGQVLPSPYGFSEGRMVAEEMAEDLALDLLKKGKDSAFVQLYLSFDEENAGESYEGNL 397 Query: 296 --PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 + R A D I R +K + D Sbjct: 398 VQNHYGKRVPKSVHGLYHFPKRSNQGRAFREAVLAIYDRIMDRRLRIRKLSISAEDVRDC 457 Query: 354 G-----------------VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 + L + E+ + K G+ L Q + Sbjct: 458 EALPEGQLDLFQHFLTSAEEEQELTERVQFLEKEEKARGAALAVMEKFGKNALLKGYQYL 517 Query: 397 QQQWQMKRAM 406 + +R Sbjct: 518 EGARGRERNR 527 >UniRef50_B8NVT6 DNA-directed polymerase kappa, putative n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8NVT6_ASPFN Length = 573 Score = 183 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 68/366 (18%), Positives = 136/366 (37%), Gaps = 54/366 (14%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+A+ E + RP+L P Sbjct: 117 IVHVDCDAFFAAVEELDRPELKTVPFA--------------------------------- 143 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--NCRDLTDF 119 ++C N++ Y+ + + + + P E SIDEA+ ++T N D D Sbjct: 144 -----LICLPINHQKYSAKAQEIRAIFAQYDPLFESASIDEAYLNITAYCTENQIDPEDA 198 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 +RA VL++T ++V GIA +AK+A++ K + + + + M L Sbjct: 199 VNRMRAEVLEQTKISVSAGIAANAKIAKIASNRNKPNGQFRVPN----DRDAILEFMKDL 254 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 PV V G+GR ++LDA+GIKT D+ + + G +++ Sbjct: 255 PVRKVNGVGRVFERELDAVGIKTCGDIYSQRALLAKLFGEKAFHFLAQCYLGLGRTKIQP 314 Query: 240 FAP-TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 ++ + +F E + ++R+ + + A + L R + +K + F Sbjct: 315 VENYERKSVGTESTFNE-MGGKEALREKLWAIAQELEKDLTRTEFKGRTLVLKVKLATFE 373 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVA 356 + S + ++D+ + L+ + + R + G+ + S Sbjct: 374 V------LSRQCQPPKAVFLAKDLYTFSLPMLEKLEKEIPNMRLRLLGLRCTNLVSTKKG 427 Query: 357 QLNLFD 362 ++ F Sbjct: 428 GIDFFG 433 >UniRef50_A8PR16 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PR16_MALGO Length = 1199 Score = 183 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 65/424 (15%), Positives = 127/424 (29%), Gaps = 70/424 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS---------NNDGCVIARNAEAKALGVKMG 52 D ++F+ S +P KPV V ++ V + N A+ GVK G Sbjct: 370 IVHIDFDSFFVSVSLRAKPAWRDKPVAVCHATLTGTDGSSSTSDVASCNYVARRYGVKNG 429 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + + L V ++ Y +S + + L ++ +++ S+DEA D T + Sbjct: 430 MSLRQARHLCPSILPV--PYAFDAYYQVSLQFYAVLLHVADVLQVVSVDEALLDATDLLR 487 Query: 113 CRD------------------------------------LTDFGREIRATVLQRTHLTVG 136 G +R + T Sbjct: 488 ALCEAQASERFAWPTSDAILSRLEAQFRLHLARHAGVQPAHALGEALRDVIRLETQCEAS 547 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 VGI A+LA AK +R + M L V D+WG+G + ++L Sbjct: 548 VGIGANILQARLATRQAKPCGVYVL--------DRVEEHMQMLDVRDIWGVGFSLRERLL 599 Query: 197 A-MGIKTVLDLADTDIR--FIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 A +G + D+ I++ ++ G L+ +Q + ++ Sbjct: 600 AWLGTTCIGDICQRTDEAHMIQQFGPKHGRALWQKFHGHDTHVLQ-ATRERQSVGAHVNW 658 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRF-ISTFIK--------TSPFALNEPYY 304 G R+ D +R+ + A + H + + + F + Sbjct: 659 GVRLHDDTEVRRFLQDVCAEVMRRASHMHVSAATHVQLQVMQRADEAGESPKFLGHGLCR 718 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 S++ D + AA L + + + + ++ Sbjct: 719 TFHRSIR--RRVYDRSSLYAAAWPLLQKLQIPAVDVRGIALSVSGLERGSTRSSWPWESR 776 Query: 365 APRP 368 Sbjct: 777 EKHR 780 >UniRef50_Q3A3S4 Nucleotidyltransferase/DNA polymerase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A3S4_PELCD Length = 393 Score = 183 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 69/400 (17%), Positives = 130/400 (32%), Gaps = 20/400 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 V F + P L +P+ V + + +AEA++ GV+ G + + Sbjct: 5 ILHVAVPDFDVALARAADPGLESRPLAVATGVSERALLRCVSAEARSDGVQPGMSVYVAR 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-D 118 + EL + SP E S F DLTG R T D Sbjct: 65 KCCPALHL--LPPQAELAQRATRVFGELAACCSPLWEPGSPGRFFIDLTGSRRLLGATLD 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + +++R L+ G+A K +A++A G+ D+ + + Sbjct: 123 VAARLERDIVERLRLSATCGMAGNKLVARIAADY-----LHRPGICDVLR-GSESCFIGP 176 Query: 179 LPVDDVWGIGR-RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 L V + G+G R + L + ++ + +A + + + RG + Sbjct: 177 LTVSTLPGVGSVRTGRLLADLNLRRIEQVAALSVAQLEPVCGPFAALLQQRARGIDPSPV 236 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 II D ++R A+ A +LR + + ++ Sbjct: 237 CPPRR-SSAIIEETVLPRADNDDMAVRAALGRLAESCGLRLRELGRGTTCLRLQVRYVDG 295 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 E +A ++++AA L WQ R + + Q Sbjct: 296 LSEERTDSFTAPRAFDL------ELMHAADHLLQRTWQRRVRLRALRLGCDRLAPLT-RQ 348 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 L+LF + L T +D L + G ++ + + Sbjct: 349 LDLFAATQQSNDEQALQTALDRLRRQFGHESIQWGRNRGK 388 >UniRef50_Q9UBT6 DNA polymerase kappa n=23 Tax=Tetrapoda RepID=POLK_HUMAN Length = 870 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 71/435 (16%), Positives = 128/435 (29%), Gaps = 89/435 (20%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL----------SNNDGCVIARNA--EAKALG- 48 D++AFYA+ E P+L KP+ V V A AK L Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCP 162 Query: 49 ----VKMGDPWFKQKDLFRRCGVVCFSSNYELY-----------------------ADMS 81 V ++ + + + N+ Sbjct: 163 QLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYF 222 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL------------------------- 116 ++ S++E +P E+ + E ++ + Sbjct: 223 IKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNPQILQN 282 Query: 117 --------TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 + +EIR + Q+T LT GIA LAK+ + K + L N Sbjct: 283 SVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQ----ILPN 338 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 + + LP+ V GIG+ K L A+GI T +L + Sbjct: 339 RQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHI 398 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G L ++ + R+F E I + A+ L+ E R + Sbjct: 399 SLGLGSTHL-TRDGERKSMSVERTFSE-INKAEEQYSLCQELCSELAQDLQKERLKGRTV 456 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR----YQKAG 344 + +K F + + + + + + +I A L A + G Sbjct: 457 TIKLKNVNFEVK------TRASTVSSVVSTAEEIFAIAKELLKTEIDADFPHPLRLRLMG 510 Query: 345 VMLGDFFSQGVAQLN 359 V + F ++ + Sbjct: 511 VRISSFPNEEDRKHQ 525 >UniRef50_C6DZL5 DNA-directed DNA polymerase n=3 Tax=Geobacter RepID=C6DZL5_GEOSM Length = 417 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 70/429 (16%), Positives = 129/429 (30%), Gaps = 38/429 (8%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 V AF + V +L G+PV V ++ + +AEA A GV G P + + Sbjct: 5 ILHITVPAFAIALARVVDSNLRGRPVAVAPLNSERALLQCISAEAAAEGVHAGTPIYHAR 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD-LTD 118 ++ + + L A S ++ E +P VE AF DLT R D Sbjct: 65 KSCP--ALIVIAPDPHLMAKGSQALLDLSAEFTPIVEP-GAGRAFLDLTASRRLFGSARD 121 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + + R L G K ++++A V +R ++ Sbjct: 122 VAARLEKAIANRMGLEAMAGAGVNKLVSRVAADV------MQEPGVYDVFHGAERSFLAP 175 Query: 179 LPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 PV + G+G L + ++ V +A + +R RG + Sbjct: 176 FPVSVLPGVGESRQALLFRDLNLQRVEQVASLSVPQLRLAVGPFAPLLHDRSRGIDRSPV 235 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + EI+ + D + + A +LR + R ++ + + Sbjct: 236 QP-PRLSTEIVEEGLLDQEENDDAILLSELLRLAEACGLRLRRLRKGARKLTLSVMYADG 294 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + L PT ++ A + R + + + Sbjct: 295 VSQQGKKV------LPVPTSLDLPLLAAVEDLFFTTCKRRQRVKGLRLSCDQVAEEAGQM 348 Query: 358 LNLFDD--NAPRPGSEQLMTVMDTLNAKEGRGTLYFA-----------GQGIQQQWQMKR 404 +LF L +D L K G+ + + W ++ Sbjct: 349 -DLFAPVTAQVSQKQADLQETLDLLREKHGQDAVRWGKGLAARREATLASEPPPTWDPEQ 407 Query: 405 AMLSPRYTT 413 Y T Sbjct: 408 NK----YMT 412 >UniRef50_UPI0000397F7C COG0389: Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Actinobacillus pleuropneumoniae serovar 1 str. 4074 RepID=UPI0000397F7C Length = 278 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 109/297 (36%), Gaps = 27/297 (9%) Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDLTDFGREIRATVLQRTH 132 LY +S ++ + VE+ S+DEA+ D+T R C T +EIR + H Sbjct: 1 MPLYKAVSEQIHQIFRRYTDIVELLSLDEAYLDVTDCRQCSGSATWIAQEIRDAIWNELH 60 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 LT GIA K LAK+A+ K + + + E + LP+ + +G+ + Sbjct: 61 LTASAGIAPLKFLAKIASDQNKPNGQF------VISPENMTAFIYDLPLKKIPRVGKVTN 114 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 +KL +G+ T D+ +D FI K F +R ++ E ++ + + Sbjct: 115 EKLAQLGLHTCGDIQHSDKAFIYKTFGKFGQRLWEFSHAIDNRKI-EANRPRKSLAVENT 173 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEH-----QYCRFISTFIKTSPFALNEPYYGNS 307 I Q + + +L+ Q + ++ +K F Sbjct: 174 LPTDIWHLAEAEQIVDELFKKLVFRLQRNWGERSLQEFKKLAIKLKFGDFT--------- 224 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQA--GHRYQKAGVMLGDFFSQGVAQLNLFD 362 L T L +WQ + G+ + + QLNL++ Sbjct: 225 -QTTLERTTDGLSR--ERFIELLQQVWQRTNRRSVRLIGLSVHYPTEKVKKQLNLWE 278 >UniRef50_Q4AAV0 DNA polymerase IV n=5 Tax=Mycoplasma hyopneumoniae RepID=Q4AAV0_MYCHJ Length = 385 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 77/395 (19%), Positives = 154/395 (38%), Gaps = 27/395 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-GCVIARNAEAKALGVKMGDPWFKQK 59 + A D++ F+ S E P L G+P+V+ + D ++ + E K+ G K+ D + K Sbjct: 4 IIAHIDIDNFFVSSELKLNPKLKGQPIVISRSEDFAMAVSVSKEVKSKGFKISDKINEIK 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNCR-DLT 117 V+ N Y +S++ + + + S ++E+YSIDE F DLT +T Sbjct: 64 KKIPNLLVIH--PNINYYKFLSDQFFNFISKNFSKKIEVYSIDECFIDLTEYSRKFKSIT 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 D I+ +++ L + +G++ K LAK+A + AK G++ +S + + + Sbjct: 122 DMLYFIKNKLVKNFRLPISIGLSYNKLLAKMATNLAK---NSEAGIMQVSTKKDVKAFIY 178 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLAD--TDIRFIRKHFNVVLERTVRELRGEPCL 235 + +++GIG + ++KL GI T+ D + I + V L Sbjct: 179 PQKIGNLFGIGIQNTEKLKKFGIITIQDFIQKGVNNEKIIEILGVNRYYFFHALTKIGDD 238 Query: 236 QLEEFAPTKQEIICSRSFGERI-TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + + R+ I + + + EKL+ ++ + F K Sbjct: 239 NVCDKLEKFKSVSHFRTLSGDILLTKKQILDGVSEFLLELVEKLKKFNKAANRVEFFFKL 298 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + S P+ D + ++ I G+ L Sbjct: 299 KNKEKDHFFSDIS------FPSNDYDFLYQNLLALVEKIENFSL-IHGFGITLSKISDYD 351 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 + LN + ++ ++ +N K G L Sbjct: 352 KSMLN---------TNPKVKNIVAKVNKKIGLKKL 377 >UniRef50_C2JSZ5 Possible DNA-directed DNA polymerase (Fragment) n=3 Tax=Lactobacillus RepID=C2JSZ5_LACRH Length = 366 Score = 181 bits (458), Expect = 5e-44, Method: Composition-based stats. Identities = 78/358 (21%), Positives = 127/358 (35%), Gaps = 21/358 (5%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVV---LSNNDGCVIARNA-EAKALGVKMGDPWF 56 D +FYAS E + R + V + G V+A + K V + F Sbjct: 16 IMCIDCKSFYASVEAIRRGIHPLAADIAVLSKGDSPGGLVLAASPNCKKRYHVGLSTRRF 75 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVE--IYSIDEAFCDLTGVRNCR 114 + +D + Y + + + + YSIDE+F D+T N Sbjct: 76 QLRD---DMQIELAEPRMADYISKNYGINRIYRQFTDDAHWYPYSIDESFIDVTHSHNLF 132 Query: 115 DL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA-AKKWQRQTGGVVDLSNLERQ 172 + +I+ V + + VGI Q LAKLA AKK + Sbjct: 133 GSNQEIATQIQKRVFDQFGIITTVGIGQNPLLAKLALDNEAKKAAPWQ---ATWTYERVP 189 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 + + D W IG R +K+L+A+GI + DLA TD + + F V+ + G Sbjct: 190 ETIWQLHDLADFWSIGSRTAKRLNAIGIHNLYDLAHTDRLLLHQRFGVLGDALYFHSWGI 249 Query: 233 PCLQLEEFAPTK---QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 L + + S+ T + + A + A +LR +S Sbjct: 250 DYSDLTRRYLPRAENKGYGNSQVLMRDYTQAREIEVVLSEIADQVAGRLRHHQVQGEVVS 309 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 I + G A +K+ PT + D+I A + W GH + V + Sbjct: 310 VGIGYADAEEAGT-SGFGAQMKI-DPTNRTDDLIRATRYLFHSKWN-GHAVRNVSVRV 364 >UniRef50_A8BDY9 DINP protein human, muc B family n=2 Tax=Giardia intestinalis RepID=A8BDY9_GIALA Length = 675 Score = 180 bits (457), Expect = 7e-44, Method: Composition-based stats. Identities = 62/396 (15%), Positives = 129/396 (32%), Gaps = 72/396 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A+ D + FYAS E P L GKPV++ V N A+ GV+ P K Sbjct: 89 VIAVLDFDCFYASIEERDNPSLRGKPVIITGG--SIVCTSNYAARKYGVRSAMPTHVAKA 146 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-- 118 L + V+ ++ E Y +S+ ++ +DE +LT Sbjct: 147 LCKD--VIAIPASMEKYMSVSHAAAEVFAGYDTHYSMHGLDECVFNLTAYMKQYAHERYG 204 Query: 119 ------------------------------------------------FGREIRATVLQ- 129 E+ + + + Sbjct: 205 VVDMWSAYAHLDKQCADGALSTDADSIPLPAVQHTNTLFKEKPGFIELLAAEVVSAIRKD 264 Query: 130 ---RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER---QRKLMSALPVDD 183 R +T VG+A + +AK+ K + G + ++ + L + Sbjct: 265 IASRLGITCSVGVAINQQVAKILTELNKPDGQTIGPLHTVTQDNYSTILHSHLKDLHIRK 324 Query: 184 VWGIGRRISKKLDA--MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ--LEE 239 +WG+G ++ L I ++ D+ + + G +Q ++ Sbjct: 325 IWGVGDASAQLLSREPFMITSIGDIFLKRGLLSLLLTPAQAKFYIFASVGLSSVQQLMDP 384 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 P + + +F E +D ++ + + A+KL+ ++ ++ ++ + Sbjct: 385 NNPNPKSVGQECTFPE-TSDEDVLKNILRNLCKLIAQKLQEQNLVPTRLNVKVRFAD--- 440 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 + + V L + D + AA +L I + Sbjct: 441 ---WIEKTHVVDLSRHSWDLDVLYLAALEALRYIQK 473 >UniRef50_UPI000180C75E PREDICTED: similar to polymerase (DNA directed), eta n=1 Tax=Ciona intestinalis RepID=UPI000180C75E Length = 785 Score = 180 bits (456), Expect = 9e-44, Method: Composition-based stats. Identities = 63/400 (15%), Positives = 121/400 (30%), Gaps = 79/400 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL---SNNDGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY E L GKP V+ G +IA + EA+ GV Sbjct: 16 VVVLVDMDCFYVQVEQRRDSSLKGKPCAVVQYNQWKGGGIIAVSYEARDEGVTRNMRGDD 75 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR- 111 K + ++ Y D V+ L + VE S+DEA+ DLT V Sbjct: 76 AKAKCPEIILCKVPMANGKADLTRYRDAGAEVIQVLLQFGGVVERASVDEAYIDLTSVVD 135 Query: 112 -----------------------------------------------NCRDLTDFG---- 120 + D Sbjct: 136 ASMKEKRILPDLEQMGNTYVVGYPKDSCDDTTNARESGLSAYRDSANSDPDAERLLVAAA 195 Query: 121 --REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++R + Q+T GI+ K L+KL+ K ++ + L Sbjct: 196 IVEKMRLAIYQQTSFRCSAGISHNKMLSKLSCGINKPNKQ------TILPFNMVAGLFQT 249 Query: 179 LPVDDVWGIGRRIS-KKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 + + + +G ++ + + G++ + L + + + F G Sbjct: 250 IKIGKIRNLGGKLGKEIMFRFGVEKIGHLTNQTKQHLVDGFGEKTGLWLYEVCHGIDHEP 309 Query: 237 LEEFAPTKQEIICSRSF--GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 ++E Q + CS++F + + ++ + E+L + Q +S + Sbjct: 310 VKERH-VAQSVGCSKNFTGNDALGSRNKVKHWVRCLTTELVERLNKDKQMNNRVSHALTI 368 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 S + + D DI +L+ + Sbjct: 369 HIGIKKP----ISRTCPISRY--DVDDITMRCLATLETLN 402 >UniRef50_Q54KS3 UMUC-like DNA-repair protein n=1 Tax=Dictyostelium discoideum RepID=Q54KS3_DICDI Length = 517 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 58/303 (19%), Positives = 122/303 (40%), Gaps = 18/303 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 F D++AFYA+ E + +L G PV V S + ++ N A+A GV+ G P L Sbjct: 83 FIHIDMDAFYANVEEMDNKELIGHPVAVGSID--MLVTSNYAARAYGVRSGLPGLLAMKL 140 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD---LTD 118 ++ S + Y ++S + + L + S+DE D+T + D Sbjct: 141 CPH--LIILPSRMDRYREVSLIIRNILYKFDKNYVSPSLDEGCIDITEYLKDNENLTGID 198 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 +++ + ++T LT +GI+ + L+K+++ K + + ++ + Sbjct: 199 VANQLQNDIFEKTTLTCSMGISCSPLLSKISSEINKPNGYFY------LDKQYSQEFIKT 252 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + + + GIG+ + L +G++ V D+ + + E + P + Sbjct: 253 IQIKKLPGIGKVRQELLKTLGLEFVSDIIEHRYE-LYYLLPEQRELLFKHALAIPIFPNK 311 Query: 239 EFAPTKQ---EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + I ++ E + D + + S +A E L E++Y + ++ Sbjct: 312 SSFRINKKKTMISKEKNCKE-LYDEKDLEDLMKSLFDKAIEMLNIENKYATTLIVKVQDF 370 Query: 296 PFA 298 F Sbjct: 371 SFK 373 >UniRef50_C9SBX6 DNA polymerase IV n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SBX6_VERA1 Length = 631 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 72/437 (16%), Positives = 140/437 (32%), Gaps = 74/437 (16%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CE V +P+ V +IA N A++ G+ + + Sbjct: 43 VIAHIDLDAFYAQCEMVRLDTPEDQPLAV--QQWQGLIAINYPARSFGIGRHCTLAEARK 100 Query: 61 LFRRCGVVC-----------------------FSSNYELYADMSNRVMSTLEELSP---- 93 L + + Y S ++++ ++E P Sbjct: 101 LCPDLIAQHVATWREGDDKWAYRDDAAANITSDKVSLDPYRLQSRKILALIKETLPSDLQ 160 Query: 94 RVEIYSIDEAFCDLTGVRNCRD---------------------------LTDFGREIRAT 126 +VE SIDE FC L D ++ R +RA Sbjct: 161 KVEKASIDEVFCYLGPPVVALDWQADALIDLDEDAENQDPDWDDVAILIGSEIIRGVRAR 220 Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 + + H T GIA K L+KL + K Q+ + ++ +S + Sbjct: 221 IHEVLHYTCSAGIANNKMLSKLGSAHKKPNQQ------TVIRNRAVQQFLSDFKFTKIRN 274 Query: 187 IGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTK 244 +G ++ + + TV DL T + ++ +RG ++ Sbjct: 275 LGGKLGDTIVNTFNTDTVKDLLPTPLDQMKARLGDETGIWVYNTIRGIDQSEVNS-RTQI 333 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 + ++ ++SF I + + + A +L E + + L+ + Sbjct: 334 KSMLSAKSFRPSIHTPDQGNRWLRIFVADIFSRLVEEGV----LENKRRPKTINLHHRHG 389 Query: 305 GNSASVKLLTPTQ---DSRDIINAATRSLDAIWQAGH--RYQKAGVMLGDFFSQGVAQLN 359 G S + P D + + + A L I G + + +G F + Sbjct: 390 GQMKSRQGPIPQGKPIDEQGLFDLARNLLQQIVAEGKVWPCENLSLSVGGFEDGITGNMG 449 Query: 360 LFDDNAPRPGSEQLMTV 376 + ++ L Sbjct: 450 IGAFLVKGAEAQALRQA 466 >UniRef50_C3ZXE4 Putative uncharacterized protein (Fragment) n=1 Tax=Branchiostoma floridae RepID=C3ZXE4_BRAFL Length = 488 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 70/411 (17%), Positives = 128/411 (31%), Gaps = 53/411 (12%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + DV+ FYA E + P L KP+ + + V + Sbjct: 4 VIVHIDVDCFYAQVEMIRDPSLRDKPLDGGKMVSFLQVFCDITCGYFCVHFIINLQQ--S 61 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR--------- 111 + + Y +V +TL++ SP VE DE F D+T Sbjct: 62 KVP----ITNDKQTDEYVTYPFQVTNTLQKFSPLVERLGFDENFVDVTETVEARVKSAFS 117 Query: 112 -------------------NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA 152 + EIR + +T GIA K LAKL Sbjct: 118 PQLNGHIFPEIEIEDERHKRLACGSQIAAEIREALHSDLGITCCAGIAHNKLLAKLVAGQ 177 Query: 153 AKKWQRQTGGVVDLSNLERQRKLMSALP-VDDVWGIGRRISKKLDAMGIKTVLDLADTDI 211 K Q+ KLM L ++ GIG R K+L +GI TV +L D Sbjct: 178 HKPNQQ------TSLLPGGVGKLMGTLKTARNIPGIGSRTFKRLQTLGISTVQELQDAPA 231 Query: 212 RFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 ++ F + + RG + P Q I SF + + ++ + Sbjct: 232 DTLQAEFGSQTAQVMQQLCRGVDPSPVTPTGPP-QTISDEDSFKK-CGSFQDAKKRMTGL 289 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD------IIN 324 ++L+ + ++ + ++ A N+ S + + ++ +++ Sbjct: 290 LQSLMKRLKGDGRFPHVLRVTVRKLS-ASNKWTNRESRQCAIPSHLFGTQAEETISKLLD 348 Query: 325 AATRSLDAIWQAGHR--YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 + H + ++ ++ + P S Q+ Sbjct: 349 LCVVLFCKMVDVNHPFHLTLINICFAKLEARSKQSASIKNFFQNEPTSAQI 399 >UniRef50_UPI0001792F1F PREDICTED: similar to polymerase (DNA directed), eta n=1 Tax=Acyrthosiphon pisum RepID=UPI0001792F1F Length = 641 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 70/428 (16%), Positives = 130/428 (30%), Gaps = 86/428 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E L GKPV V+ G +IA N EA+ GV Sbjct: 9 VIALVDMDCFYCQVEVQHNQSLTGKPVAVVQYNSWRGGGIIAVNYEARDKGVNRHMRGDD 68 Query: 58 QKDLFRRCGVV-----CFSSNYELYADMSNRVMSTLEELSPR------------------ 94 +V ++ Y S +V L + S Sbjct: 69 ALQACPDLNLVRVKELHGKADLSKYRTASQKVFEVLSQFSSCVQRASIDEAYVDLTSVVN 128 Query: 95 -------------------VEIYSIDEA-----------------FCDLTGVRNCRDLTD 118 VE YS D + + Sbjct: 129 HHISSNHNVITENDLPNTFVEGYSDDNSKDKNKNLKSWLHDVYNNELQDDYLLRLTIGAM 188 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++R ++ ++T GIA K L+KLA K Q+ + L Sbjct: 189 MVEKLRQSIFEQTGFRCSAGIANNKILSKLACGLHKPNQQ------TMLPPSSVPHLFET 242 Query: 179 LPVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQ 236 +P+ V +G ++ +++ + + DLA + +++ F + + +G Sbjct: 243 IPIKKVKNLGGKLGERIRQEFNCEFMSDLAAIPLNDLQQKFNDKTCNFLYQISKGIDNEP 302 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL----RSEHQYCRFISTFI 292 +E + I +SF + ++Q + + +KL + + ++ + Sbjct: 303 VESRLIP-KSIGSCKSFPTGLKVKEEIKQWLNTLMNDIVDKLKDDYEANKRKATLMTVSV 361 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI------WQAGHRYQKAGVM 346 + P S T +++ A SL + Q + GV Sbjct: 362 RYLDKKTKLPT-----SQCFEVTTYSHNKLLDTAYSSLCTMTENQKSLQWKNPISFLGVA 416 Query: 347 LGDFFSQG 354 +G F Sbjct: 417 IGRFVEMN 424 >UniRef50_A7TRR0 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TRR0_VANPO Length = 880 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 68/413 (16%), Positives = 125/413 (30%), Gaps = 36/413 (8%) Query: 2 FALCDVNAFYASCETVFRPDL-----WGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWF 56 D + F+A+ + D+ +V + + + + N A+ LG+K G Sbjct: 257 IFHVDFDCFFATVAALSVTDMAIDINKDAILVCHGSKNSDIASCNYVARNLGIKNGMWVS 316 Query: 57 KQKDLFR-RCGVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDLTGVRNC 113 + + L ++C N+E S + L+ EL + SIDEA C ++ Sbjct: 317 RAEKLCPKGMKLICLPYNFEQIELKSKIFYNVLKELELFQLILPISIDEAICVISNPDPF 376 Query: 114 RDLTDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 DL IR V Q T TV +G A++ LA+LA K Sbjct: 377 IDLNGVCETIRNLVHQETGGCTVSIGCAESLILARLALRLGKPDGYYVVNSNSDI--ANN 434 Query: 173 RKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDI----RFIRKHFN-VVLERTV 226 + + D+ G G KL + IK L + ++ E+ Sbjct: 435 VEFWKKFKITDLPGFGNATLNKLDEQFNIKDQNSLYNLQQLVINNDLKNILGNKTSEKLN 494 Query: 227 RELRGEPCLQ------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 L+G + + ++ + ++G R + + I A +KL + Sbjct: 495 LALKGLDDNESTKMIYDPDEVFKRKSLSMEINWGIRFENIGQVDVFIDRCAKYLVDKLIN 554 Query: 281 EHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + ++ I + S + KL PT D I Sbjct: 555 MNSKIDQVTLKISRKAKSAPENPLKYMGMGLCDSFSKNSKLGLPTSDIGIIATEVKSLFR 614 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKE 384 + + + L + + + K Sbjct: 615 MLSCPPTELRGVSIQFNKLIDTNDVDYRL----KLPFKKIIVDDTFNKIPEKL 663 >UniRef50_C2EU55 UMUC domain protein DNA-repair protein n=3 Tax=Lactobacillus RepID=C2EU55_9LACO Length = 508 Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats. Identities = 78/495 (15%), Positives = 139/495 (28%), Gaps = 91/495 (18%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++ D+ +FYAS E + + +VV + +A + K GV + Sbjct: 7 IYMAIDLKSFYASVECIAHHLNPLNANLVVADRSRTNKTICLAVSPALKQFGVPGRPRLY 66 Query: 57 KQKDLFRRC--------------------------------GVVCFSSNYELYADMSNRV 84 + + + R G Y + S V Sbjct: 67 EVQQIVDRLNRERAKKATCHHLSKHSSIYRGKLLKSPNLRVGFRIVPPRMHFYMEKSAEV 126 Query: 85 MSTLEEL--SPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIA 140 + YSIDE D+T + ++I + T +T GI Sbjct: 127 YGIYLRFIKPENIHTYSIDEVMMDVTDYLHDHQVSPHTLAKQIIQQIQLETEITATAGIG 186 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDL---SNLERQRKLMSALPVDDVWGIGRRISKKLDA 197 LAK+A K V + + + +R L + P+ D W IGR +K+L+ Sbjct: 187 TNLYLAKVAMDIVAKRIPADRDGVRIAQMNEYQYRRYLWAHQPLTDFWRIGRGYAKRLEK 246 Query: 198 MGIKTVLDLADTD---------IRFIRKHFNVVLERTVRELRGEPC---LQLEEFAPTKQ 245 +G+ T+ D+A + + F E + G ++ + + Sbjct: 247 LGLHTMGDIARCSLGKLSDPLNEEILYREFGKNAELLIDHAWGHETATITDIKNYHSEEH 306 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS---------- 295 I S+ Y A A + H I Sbjct: 307 GIYSSQVLMRP-YKYHEGLAAAQGMVDSVALSMVKRHVVSADFGIVINYDPQSLQYAPNY 365 Query: 296 ------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGD 349 F + A KL PT ++ + + +K +++ Sbjct: 366 QGPVVEDFYGRRTAKPSHAHQKLDLPTASGSELRQIYKQLYEKCVNPNLLIRKITLIVTH 425 Query: 350 FFS-------QGVAQLNLFDDNAPRPGSE-----------QLMTVMDTLNAKEGR-GTLY 390 Q+NLF+D E +L T + L K G + Sbjct: 426 MIDEDIAAKTPHFKQVNLFEDPQREIKQERVAAIKRQRDQKLQTTILKLQQKLGNKNVVL 485 Query: 391 FAGQGIQQQWQMKRA 405 + +R Sbjct: 486 HLADLKKGSTTKERN 500 >UniRef50_B7GU73 UMUC domain protein DNA-repair protein n=32 Tax=Bacteria RepID=B7GU73_BIFLI Length = 548 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 84/529 (15%), Positives = 144/529 (27%), Gaps = 125/529 (23%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E R D +VV +A + K G+ F+ Sbjct: 14 YIAIDLKSFYASVECAARGLDPLTTHLVVADETRTDKTICLAVSPSLKNYGIPGRARLFE 73 Query: 58 QKDLFRRCGV-------------------------------VCFSSNYELYADMSNRVMS 86 K + V Y ++S +V Sbjct: 74 VKQRLNGVNIERAVHAPGGRLIGESCDARDLERSPRLKASMVIAKPRMAHYLEVSGQVYG 133 Query: 87 TLEELSP--RVEIYSIDEAFCDLTGVRNC--RDLTDFGREIRATVLQRTHLTVGVGIAQT 142 + + + +YSIDE F D+T R I +L T +T GI Sbjct: 134 IYLKYAAPEHIHVYSIDEVFIDVTPYLRSLGMGPHAMARTIVREILDETGITATAGIGSN 193 Query: 143 KTLAKLANHAAKKWQRQ---TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 LAK+A K + +L + +R L + P+ D W +GR ++KL+ G Sbjct: 194 MYLAKVAMDIVAKHMPADRDGVRIAELDEMSYRRLLWNHRPLTDFWRVGRGYARKLERAG 253 Query: 200 IKTVLDLADTD---------IRFIRKHFNVVLERTVRELRGEPCLQLEE---FAPTKQEI 247 + T+ D+A + + F V E + G ++ + + P I Sbjct: 254 LTTMGDIARCSVGRASDYYNEDLLYRMFGVNAELLIDHAWGWEPCEIADIRSYEPGAHSI 313 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS------------ 295 + D+ + R A A L + ++ + Sbjct: 314 SSGQVLTGP-ADWHTARLIAKEMADALALDLVDKGVMTNRLTLAVGYDIGSLDASKLDSC 372 Query: 296 ----------------------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAI 333 S+ L T + I A T + I Sbjct: 373 ADRAMRRAAERAAKTYQGPVTVDRFGRRVPKSAVGSIGLGDFTSSAARIREAMTMLYERI 432 Query: 334 WQAGHRYQKAGVMLGDFFSQ-------GVAQLNLFDDNAPRP------------------ 368 A ++ V+ D + QL+LF D+ Sbjct: 433 VDARLLVRRLTVVADDVATPKELAAGKRYEQLDLFGDDGDMRYDCDSTESGGDGSGRMPA 492 Query: 369 -----------GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 + + + K GR + A R Sbjct: 493 CGDDAAAQTLAREHDIQRALLDVKRKFGRNAVIKAMDMEDGATGQDRNR 541 >UniRef50_A4E7R3 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E7R3_9ACTN Length = 523 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 70/321 (21%), Positives = 122/321 (38%), Gaps = 17/321 (5%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ FYAS E V R + +VV + G +A K LG+ F+ Sbjct: 30 YICIDLKTFYASVECVDRGLNPLTTNLVVADESRGRTTICLAITQAMKDLGIHNRCRLFE 89 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNCR- 114 D + + Y ++S ++ E V +YSIDE F D+T + Sbjct: 90 IPD---GIDYIKAVPRMQHYMEVSAQIYGIYLEYVSPQDVHVYSIDECFIDVTPYLDLYH 146 Query: 115 -DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQR 173 D +R VL RT +T VGI AK+A K GV L + ++ Sbjct: 147 TDAEGLACTLRDEVLARTGITATVGIGPNLFQAKVALDVTAKHVASRIGV--LDDETFRK 204 Query: 174 KLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEP 233 ++ P+ D+WGIG ++ +L+ G+ ++ +A D + V E + G Sbjct: 205 EIWPHRPITDIWGIGPGVAARLEKYGVYDLMGVAALDENLLYDELGVNAEYLIDHAFGRE 264 Query: 234 CLQLEEFAPTKQEIICSRSFGERITD---YPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 + + + + S + G+ ++ Y + A L +H C IS Sbjct: 265 PTTIADIQAYRPQ-ATSTTTGQVLSKGYAYEQAYTVLREMVDNAVLDLVDKHVVCDSISL 323 Query: 291 FIKTSPFALNEPYYGNSASVK 311 F+ + + S + + Sbjct: 324 FVGYASERADIRRLDASGTAQ 344 >UniRef50_D0MYB5 DNA polymerase kappa, putative n=1 Tax=Phytophthora infestans T30-4 RepID=D0MYB5_PHYIN Length = 601 Score = 178 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 66/296 (22%), Positives = 109/296 (36%), Gaps = 44/296 (14%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 + D++ FYA+ E P L P+ V G + N A+ GV+ P F K+L Sbjct: 86 IVVVDMDMFYAAVEMRDDPKLRDVPLAVGGL--GMISTTNYAARQFGVRAAMPGFIGKEL 143 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR------- 114 + N + YA ++ + + E P E +S+DEA DLT Sbjct: 144 CPD--LHFVPVNMKKYAGVAAEIRAVFAEYDPDFEAFSLDEACLDLTDYIAENWQKYISD 201 Query: 115 ----------DLTDFG--------------REIRATVLQRTHLTVGVGIAQTKTLAKLAN 150 D ++ RE+R V T LT GIA LAK+ + Sbjct: 202 AMDEIESKESDKEEWASTASGRAAIAAVVVRELRKKVFDCTQLTASAGIAVNSMLAKICS 261 Query: 151 HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADT 209 K + + ER + LPV + GIG+ + K L +A+ ++T DL D Sbjct: 262 DMNKPNGQYVLPF----SRERVMTFIRELPVRKIGGIGKVMEKTLNEALDVQTGGDLFDQ 317 Query: 210 DIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 + ++ G ++ R+F +R++D + + Sbjct: 318 RGKIAHLFSGKTAMWLLQTSLGVQER---REKQERKSFSRERTF-KRLSDPKQLEE 369 >UniRef50_Q759A8 ADR369Cp n=1 Tax=Eremothecium gossypii RepID=Q759A8_ASHGO Length = 827 Score = 177 bits (448), Expect = 7e-43, Method: Composition-based stats. Identities = 76/449 (16%), Positives = 133/449 (29%), Gaps = 44/449 (9%) Query: 2 FALCDVNAFYASCETVF--RPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFKQ 58 D + F+A+ + P P+ V V + N A+ G++ G K Sbjct: 201 VLHVDFDCFFATISGIKAGYPSKAEVPLAVCHGGSSSDVASCNYAARECGIQNGMWVSKA 260 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDLTGVRNCRDL 116 K+L + +VC Y+ Y +SN LE + V S+DEA C + + Sbjct: 261 KNLCPQ--LVCLPYTYDEYETISNAFYEVLEGLKAFDAVYPISVDEAVCVIDMPLDTLSC 318 Query: 117 TDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQRQ-------TGGVVDLSN 168 + IR+ V +RT +V VG A + LA+LA AK GG + + Sbjct: 319 QNLCIRIRSEVAERTGGCSVSVGCAPSLVLARLALKRAKPDGYLVCTKESIKGGDTQVVS 378 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKL------DAMGIKTVLDLADTDIRFIRKHFNVVL 222 L + D+ G+GR I++KL I V L I + ++ Sbjct: 379 P---AHLFETCALRDLPGVGRAIAEKLLLGSTGHEHTIAQVSQLFSRS-ELIARLGSITG 434 Query: 223 ERTVRELRGEPCLQ------LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 + +G ++ ++ + ++G R P + + Sbjct: 435 AKLADLFQGLDDVESSRMLCNPRAYFARKSLSVEINWGIRFDAVPEVDAFLDRLVQYLVG 494 Query: 277 KLRSEHQYCRFISTF---------IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAAT 327 KL I I+ + S S +L T I Sbjct: 495 KLNELRMTTSHIVLKIARRSRDAPIEPPKYLGMGDCDSYSKSCRLGLATNIPGVISAEIK 554 Query: 328 RSLDAIWQAGHRYQKAGVMLGDFFSQ--GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEG 385 + + + V L + + Sbjct: 555 AAFRMLCCPAKELRGIAVQFLKLKEASISQMPRQLRFPFGTIRPLTTPKNRITASVTELP 614 Query: 386 RGTLYFAGQGIQ--QQWQMKRAMLSPRYT 412 A + + + SP +T Sbjct: 615 PVVYKRATPIKDFFDRHKRTSSSPSPDFT 643 >UniRef50_Q4A688 DNA polymerase IV n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A688_MYCS5 Length = 413 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 68/386 (17%), Positives = 151/386 (39%), Gaps = 22/386 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D ++++ S +P L KPV + S+ ++ + E K G K G Sbjct: 9 IFHIDFDSYFVSAVRTIKPYLKNKPVAIARSSYKSLAVSVSYELKVKGAKAGMTRGDILK 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNCR-DLTD 118 + + S ++ LY ++S ++ + L+E +S ++ I S+DE + D+ + N + Sbjct: 69 IEP--NTIFVSEDFSLYTNLSRKIFAYLQEKISHKILIASVDECYLDVNHLVNDEKKALN 126 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + + +L+ + + +GI+ TK AK+ + K + ++L N + Sbjct: 127 LAKYTQRKILEVFDIPITIGISTTKWYAKMTTNLNKPFGIGLTNKMNLIN-------ILN 179 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRF--IRKHFNVVLERTVRELRGEPCLQ 236 LP+ D +GIG+ + +KL + I + DL +I + + F + + L+ + + Sbjct: 180 LPIIDFYGIGKSLVEKLKTLKIYYIKDLYARNIEDLSLVEVFGTTAYKYLDALKFDKYEE 239 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + + I SF + Q + A + +LR I+ + Sbjct: 240 IIPEIKKSKVIGHESSFENINIPQEEVLQRLKEIVALVSNRLRYSSLVSNTINVKAR--- 296 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 + + + K+ Q+ + A + + G + + S+ Sbjct: 297 ---IQSKKWFNKNKKIPQYCQEFKCFWKYAYEIYQKNY-ENKKLNSIGFSVSNLKSEYDL 352 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNA 382 ++NL P S+ + + +N+ Sbjct: 353 EINLNLFEKPIENSKAIEIA-NQINS 377 >UniRef50_D0SQN6 Predicted protein n=1 Tax=Acinetobacter junii SH205 RepID=D0SQN6_ACIJU Length = 256 Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats. Identities = 80/255 (31%), Positives = 144/255 (56%), Gaps = 2/255 (0%) Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 + L++ + V +VWG+GR+ KKL+ MG+++VLDL + + + I+K F++V+E+TV Sbjct: 2 DPCSTETLLAQVDVSEVWGVGRQNCKKLNTMGVQSVLDLINANPKEIKKQFSIVMEKTVL 61 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 EL+G C+ L + K++II SRS+G + + ++ ++ Y ARA +++R + C+ Sbjct: 62 ELQGLSCIDLSDDTVAKKQIISSRSYGNPVYEMDDIKASVRLYVARAVKRMREDGSICKM 121 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 I +I+TS F E Y V++ T D I AA + +D I++ G +Y+KAG++L Sbjct: 122 IGVYIQTSRFDKTERYSPY-IVVQMHEHTDDLLLITKAAMKGIDQIFKKGFKYKKAGIVL 180 Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA-GQGIQQQWQMKRAM 406 + Q +LF D + + E+L ++ ++ + G+ + + W M + + Sbjct: 181 LEITDQSKFVPDLFTDYSHKQERERLSDAIEAISERFGKNLVTLGIANNKEATWHMNQNL 240 Query: 407 LSPRYTTRSSDLLRV 421 SP Y T+ SDL RV Sbjct: 241 RSPSYLTKWSDLPRV 255 >UniRef50_C6VKK8 UV-damage repair protein n=17 Tax=Bacteria RepID=C6VKK8_LACPJ Length = 507 Score = 176 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 68/494 (13%), Positives = 134/494 (27%), Gaps = 91/494 (18%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWFK 57 + D+ +FYAS E V D +VV + +A + K GV F+ Sbjct: 7 YMAIDLKSFYASVECVAHQLDPLNANLVVADTSRTDKTICLAVSPALKQFGVPGRPRLFQ 66 Query: 58 QKDLFR--------------------------------RCGVVCFSSNYELYADMSNRVM 85 + Y S + Sbjct: 67 VEQRVATLNRARGRQTSYQAVRRHRSIYRDQLLKHANLGIDYRVVPPRMSYYMQKSAAIY 126 Query: 86 STLEEL--SPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQ 141 + +YSIDE F D+T + + + + T +T GI Sbjct: 127 DIYLRFIKPEHIHVYSIDEVFMDVTDYLSTFQVSPHALAKTMIHEIQAETGITATAGIGA 186 Query: 142 TKTLAKLANHAAK---KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 LAK+A + + + ++ L + P+ D W +G +K+L A+ Sbjct: 187 NLYLAKVAMDIVAKKIPADADGVRIAQMDEQQYRQYLWAHEPLTDFWRVGHGYAKRLAAL 246 Query: 199 GIKTVLDLADTD---------IRFIRKHFNVVLERTVRELRGEPC---LQLEEFAPTKQE 246 G+ T+ D+A + + F E + G+ ++ + ++ Sbjct: 247 GLNTMGDIARCSLGTLSDSHNEEQLYREFGKNAELLIDHAWGDESATIADIKNYHASEHG 306 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS----------- 295 I S+ Y + + +L + H + I Sbjct: 307 IYASQVLMRP-YTYTEGQAVLRGMVNNLTLELVARHVVTDQLGIRIDYDANASSVGTHYQ 365 Query: 296 -----PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 + + +V L + ++ A + + ++ VM Sbjct: 366 GAVTEDYYGRQVPKPAHTTVTLAQASASQHELGAAYQQLYQQVVNRQLMVRRVTVMANHL 425 Query: 351 FS-------QGVAQLNLFDDNAPRPGSEQ-----------LMTVMDTLNAKEGR-GTLYF 391 Q NLF++ E+ L + L + G + Sbjct: 426 VDEQQVRRQPRYQQTNLFENPEVAQAQERDAQRKRERDGQLQRAILKLQRRSGNKNVVIR 485 Query: 392 AGQGIQQQWQMKRA 405 ++R Sbjct: 486 LADLKPSSTTIERN 499 >UniRef50_D2VGP4 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VGP4_NAEGR Length = 485 Score = 175 bits (444), Expect = 2e-42, Method: Composition-based stats. Identities = 62/408 (15%), Positives = 127/408 (31%), Gaps = 65/408 (15%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAK-ALGVKMGDPWFKQK 59 + D++ FYA E V P P+ + N + N + + + Sbjct: 15 VIIHLDLDCFYAQVEEVENPKYRDLPLGIQQNQ--TISTVNYCGRIKYKIPKMTRVKQAL 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELS-------PRVEIYSIDEAFCDLTGVR- 111 ++ ++ + E+Y + S ++ +E+ IDEA+ ++T Sbjct: 73 EMCPE--LIVIPARMEIYREESRKIFDECIGECVNSFHGDCVLEVCGIDEAYINVTDEVN 130 Query: 112 ------------------------------NCRDLTDFGREIRATVLQRTHLTVGVGIAQ 141 + + EIR V T+ GIA Sbjct: 131 WRLENATELGIDVKDHRGRKVSKSVNSQDNHLNIGSQIAEEIRCNVFNSLGYTISAGIAH 190 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG-I 200 +K L+KLA+ K + L E + +++ V + +G +KL + I Sbjct: 191 SKFLSKLASKKQKPNGQA------LIYSESFDEEINSQDVSIIPNVGYTTKQKLAELCQI 244 Query: 201 KTVLDLADTDIRFIRKHF--NVVLERTVRELRGEPCLQLEEFAP--TKQEIICSRSFGER 256 TV L I K F + + + G+ + + + I +F Sbjct: 245 STVKQLRAQTYVNIIKCFNSDKAAIKVLNIANGKFDEEYDRVVSKGPPKSIGSELTFLT- 303 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS---TFIKTSPFALNEPYYGNSASVKLL 313 I Y Q + + +++ + + ++ + +PY+ S + Sbjct: 304 IQTYEDFEQKLRTITGDLFTRIQRDLKRNSNRYATKLTLRYCHGSYRDPYHSVSCKITSN 363 Query: 314 TPTQ-------DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 D +I + + + Q+ GV + DF Sbjct: 364 IYNNLNNYEEKDESNIHSLVIKMFKQKVSLPFKLQRMGVSVSDFVEPP 411 >UniRef50_Q6FV13 Similar to uniprot|P12689 Saccharomyces cerevisiae YOR346w REV1 DNA repair protein n=2 Tax=Eukaryota RepID=Q6FV13_CANGA Length = 887 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 66/420 (15%), Positives = 133/420 (31%), Gaps = 52/420 (12%) Query: 2 FALCDVNAFYASCE-TVFRPDLW-----GKPVVVLSNNDGCVIARNAEAKALGVKMGDPW 55 D + F+A+ P + VV +N+ + + N A+ G+K G Sbjct: 258 VFHIDFDCFFATVAYLTKDPSIKCDIEKDVIVVCHGSNNSDIASCNYVARGYGIKNGMWV 317 Query: 56 FKQKDLFRR-CGVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDL----- 107 K L + +V N++ S TL +L + SIDEA C + Sbjct: 318 GHAKRLLPQGVNIVTLPYNFDEIQAKSEIFYKTLAAMKLFDMILPISIDEAICVVVNTHP 377 Query: 108 --------TGVRNCRDLTDFGREIRATVLQRT-HLTVGVGIAQTKTLAKLANHAAKKWQR 158 G +L ++IR ++ T +V +G A + LA+LA K Sbjct: 378 ISQESANTDGGSQSSNLDQLCKDIRLSIFSATNGCSVSIGCADSLLLARLALRKGKPNGY 437 Query: 159 QTGGVVDLS-NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL------ADTDI 211 + + + + ++ + D+ G+G I KL + D+ + Sbjct: 438 FIIDREQVQGSKDGSNEFLATFKLKDLPGVGHSIVTKL--LTAFKCKDMNLAELKQRASL 495 Query: 212 RFIRKHFN-VVLERTVRELRGEPCLQ------LEEFAPTKQEIICSRSFGERITDYPSMR 264 F++ + + L+G+ + E ++ + ++G R + + Sbjct: 496 EFLKNCVGVKLGTKIYLALQGQDDEESTRMLFDPENYFERKSLSIEINWGIRFDNIHEID 555 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTS---------PFALNEPYYGNSASVKLLTP 315 I KL + ++ + + + + +L P Sbjct: 556 DFIDRCCDYLLNKLNELERKTSQLTLKVMRRAANAPVDPPKYMGMGRCDAFNRTSRLGIP 615 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF----FSQGVAQLNLFDDNAPRPGSE 371 T + I A ++ + + S + NLFD P + Sbjct: 616 TNEHGTIATEAKAMYRSLACPAKELRGLSIQFNKLSKLDESLSNVRSNLFDLLQKTPKMD 675 >UniRef50_Q17IT1 Terminal deoxycytidyl transferase rev1 n=1 Tax=Aedes aegypti RepID=Q17IT1_AEDAE Length = 650 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 102/302 (33%), Gaps = 19/302 (6%) Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKT 144 + +E S DE F DLT + N D+ DF IR + + T G+ + Sbjct: 29 HANRYTLNIEAVSCDEMFVDLTDLINDVGVDVMDFVGYIRDQIRESTECPCSAGVGANRL 88 Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVL 204 A++A AK + E + M +P+ D+ GIG + +L + T Sbjct: 89 QARMATKKAKPNGQYYLA------PETVLEYMRDIPISDLPGIGPSTTYRLKQLSWSTCG 142 Query: 205 DLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 DL I +++ F + RGE L + ++ + ++G R + + Sbjct: 143 DLQFVPISVLQREFGKKFGDTIYHACRGEDDRPLV-YDQVRKSVSVDVNYGIRFKEEAEV 201 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFI---------KTSPFALNEPYYGNSASVKLLT 314 + + ++L + + I+ + +T+ F + + S Sbjct: 202 ERFMKQLTEEIHKRLMEIKKRGKVITVKLLVRSPEAPVETAKFMGHGLCDIITKSHPFKD 261 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 T D I A + I H + G+ L F + + + + Sbjct: 262 YTCDLAVIEKAVLMLMKQIAAPPHELRGIGLQLSKFDEKKSSVDSKNSLKTMFEKAAAKQ 321 Query: 375 TV 376 Sbjct: 322 EA 323 >UniRef50_C5J784 DNA polymerase IV n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J784_MYCCR Length = 387 Score = 174 bits (440), Expect = 6e-42, Method: Composition-based stats. Identities = 73/394 (18%), Positives = 148/394 (37%), Gaps = 28/394 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND-GCVIARNAEAKALGVKMGDPWFKQK 59 + A D+N F+ S E +P+L +PV + ++ ++ + + K G K+ D + K Sbjct: 4 IIAHIDINTFFVSAEIRLKPELKKQPVAIARSDKFAMAVSISKQVKEKGFKITDKLSQIK 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTL-EELSPRVEIYSIDEAFCDLTGVRNCRD-LT 117 +V N + Y +S + + + S ++EIYSIDE F DL+ + Sbjct: 64 SAIPD--LVIIKPNLKYYQFLSKKFFQYIVKNFSKKIEIYSIDECFVDLSKFAKNFRTIK 121 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 I+ + L +GI+ K LAK+A + AK T + + + + Sbjct: 122 SMIYYIKNKIETDLELPCSIGISYNKFLAKMATNLAK----NTRENIFILPRSKIETHIY 177 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADT--DIRFIRKHFNVVLERTVRELRGEPCL 235 LP+ ++GIG+ S+ L+ + T+ D + + + K + L + Sbjct: 178 NLPIQQLFGIGKSTSRLLNEKKVYTIKDFLNLGINNEILIKIMGTTRNYFYQNLLEKGDD 237 Query: 236 QLEEFAPTKQEIICSRSFGERIT-DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 + + + + +F T D + + + KL+ + I + Sbjct: 238 VILDKESHFKSVSRFNTFLSSETIDAKQIALITKEFCSDLLTKLQMYQKNTARIEIYYHN 297 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + L TP+ D I ++ I + + GV +Q Sbjct: 298 YLGKTIRYWKN------LDTPSNDFNFISTELLFLVEKIDNYNN-IKGFGVRFSKLANQK 350 Query: 355 VAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 FD + +++ ++ +NA+ G + Sbjct: 351 ------FDSTMTKSKVKKI---INKINAQHGSKS 375 >UniRef50_C2KQG7 ImpB/MucB/SamB family DNA-damage repair protein n=2 Tax=Mobiluncus mulieris RepID=C2KQG7_9ACTO Length = 545 Score = 173 bits (439), Expect = 9e-42, Method: Composition-based stats. Identities = 80/524 (15%), Positives = 144/524 (27%), Gaps = 119/524 (22%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDG---CVIARNAEAKALGVKMGDPWF 56 ++ D+ +F+AS E R D +VV +A + K GV F Sbjct: 16 IYMAIDLKSFFASVEARERGLDPMNTNLVVADETRTEKTICLAVSPALKTFGVPGRPRLF 75 Query: 57 KQKDLFRRCG-------------------------------VVCFSSNYELYADMSNRVM 85 + + + +LY + S V+ Sbjct: 76 EVIAQVKAVNRDRARRASQHRLAGSSYYLDELRANPALAVDYLVARPRMKLYMETSATVL 135 Query: 86 STLEEL--SPRVEIYSIDEAFCDLTGVRNCRDLT--DFGREIRATVLQRTHLTVGVGIAQ 141 S V +YSIDE F D TG T +F ++ V T +T GI + Sbjct: 136 SRYLHWVSPADVHVYSIDEVFIDATGYLERYRATPVEFATKLIHDVYAHTGITATAGIGE 195 Query: 142 TKTLAKLANHAAKKWQR---QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 LAK+A K + +L+ + +L + P+ D W +G ++KL+AM Sbjct: 196 NLYLAKVAMDILAKHAEADEHGVRLAELTMRTYREQLWTHRPLTDFWRVGPATARKLEAM 255 Query: 199 GIKTVLDLADTD---------IRFIRKHFNVVLERTVRELRGEPCL---QLEEFAPTKQE 246 + T+ D+A + + F V E + G ++ + P + Sbjct: 256 DLFTMGDVARASLGERYDRANEEALYRIFGVNAELLIDHAWGWEPTTIADIKSYHPQAKS 315 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS----------- 295 + + + R + A + L + + + Sbjct: 316 VNVGQVLPRAYE-FGEARMIVREMADGLSLDLVDKGLTTDQVVLTVGYDTENLADPARAA 374 Query: 296 --------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 S L T +R ++ A TR + I G ++ V Sbjct: 375 TYRGEVKRDHYGRLIPKPVHGSENLGRATASTRLLLEAVTRLFERIVDPGLLVRRMYVSA 434 Query: 348 GDF----------------------------------FSQGVAQLNLFDDNAPRP----- 368 QL+LF D Sbjct: 435 SHIRREEALVPRVDVVDVADGSGVVGGTGGFMSGEPKSPGVGEQLDLFTDYEALAAVEAV 494 Query: 369 ------GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 + + + K G+ ++ + R Sbjct: 495 EQAALVAERRNQEALLRIKRKFGKNAVFRGVNLSAGATALDRNR 538 >UniRef50_A0DAQ7 Chromosome undetermined scaffold_43, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0DAQ7_PARTE Length = 521 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 63/440 (14%), Positives = 133/440 (30%), Gaps = 74/440 (16%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D++A+YA E +P V + +IA N A+ G+K G + Sbjct: 7 VYIHIDMDAYYAQAEQKLLNIPEDQP--VCARQWNSLIAINYPARDAGIKRGMLSEEAIK 64 Query: 61 LFRRCGVVC---------------------------FSSNYELYADMSNRVMSTLEELSP 93 L + + Y S + +T++ Sbjct: 65 LCPNVMLPHVETFKVIDGKMVFSTLKDKYIQHNQYEEKVSLRYYRQESKLIFTTIKRFCN 124 Query: 94 RVEIYSIDEAFCDLTG----------------------------VRNCRDLTDFGREIRA 125 VE DE + ++ R + + IR Sbjct: 125 CVEKGGTDEGYIQVSEKELEDIEAQQFYGHLMKELPEDYQLTEQDHLLRRASLLCQNIRD 184 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + T GI+ K LAKLA+ K ++ + + +S + ++ + Sbjct: 185 AIYTETKYKCSAGISFNKMLAKLASATNKPNKQ------TIILECMLPECISNIGINKIR 238 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL-EEFAPTK 244 G G ++ + L G+KTV I ++ F + +LRG + +E Sbjct: 239 GFGGKVQEALLESGLKTVGQAQTLSIYELQSLFGDKAQYIYDKLRGYDDEIVKKEVDLKN 298 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 + I+ ++ + + + Q++ ++ ++ + + + + + + Sbjct: 299 KSILSLKNIKK-TSSREVIIQSLELILHDITMRVTDYYEDSNLVPSVLVIHYHNVEKGSH 357 Query: 305 GNSASVKLLTPTQDSR-DIINAATRSLDAIWQ-AGHRYQKAGVMLGDFFSQGVAQLN--- 359 S + L P + R I L+ I G+ F N Sbjct: 358 QKSEPIYLTLPIESFRLTIEERVHSILNQIQDNEMFPLIHIGISCRYFKPMIQGIQNPIT 417 Query: 360 LFD----DNAPRPGSEQLMT 375 +F + +L Sbjct: 418 MFFKKILEQQEYEKQAKLAE 437 >UniRef50_Q1RLS3 Zgc:136881 n=6 Tax=Clupeocephala RepID=Q1RLS3_DANRE Length = 743 Score = 173 bits (437), Expect = 1e-41, Method: Composition-based stats. Identities = 76/431 (17%), Positives = 131/431 (30%), Gaps = 82/431 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E +P+L KP VV G +IA + EA+A GV Sbjct: 8 VVALVDMDCFYVQVEQRLKPELKNKPCVVAQYKTWKGGGIIAVSYEARAHGVGRNMFADD 67 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + L V ++ Y + S V+ + +E SIDEA+ DLT Sbjct: 68 ARKLCPDLQVARVPEAHGKADLTHYREASVEVIEVMSRF-AVIERASIDEAYMDLTASVQ 126 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ-RQTGGVVDLSNLER 171 R ++I A L+ TH+ + L + A AA Q S+ Sbjct: 127 ERLKNTSVQDITAQQLKNTHIQGFPTQQENTHLDRDAQRAAGLQQWLDLLSSSTESSPAD 186 Query: 172 QRKLMSALPVDDVW-------------GIGR-RISKKLD--------------------- 196 + AL V+ + GI ++ KL Sbjct: 187 LHLAVGALIVEQMRAAVEEHTGFRCSAGISHNKVLAKLACGLNKPNRQTVLPLSSVPQLF 246 Query: 197 -------------AMG--------IKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPC 234 +G ++ + DL + +HF RG Sbjct: 247 STLPISKIRNLGGKLGSSITETLSVENMGDLTRFSRAQLEQHFGDKTGPWLYDLCRGIEF 306 Query: 235 LQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRS----EHQYCRFI 288 ++ + I CS++F + ++ + A E+L + R + Sbjct: 307 EPVKPRQLP-KSIGCSKNFAGKTCLRTKQQVQYWLHQLALELEERLNKDRDVNGRVARQL 365 Query: 289 STFIKTSPFALNEPYYGNSASVKLLT-----PTQDSRDIINAATRSLDAIWQAGHRYQKA 343 + ++ + + S L+ T DS II + + Sbjct: 366 TVGVRQAGGQRSG---SFSRCCALVRYDAMKMTNDSLTIIKSLNTAGAHQEAWSPALTLL 422 Query: 344 GVMLGDFFSQG 354 + F Sbjct: 423 HLSASKFSDAP 433 >UniRef50_O48585 Similarity to DNA-damage-inducible protein P n=2 Tax=Arabidopsis thaliana RepID=O48585_ARATH Length = 955 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 72/423 (17%), Positives = 130/423 (30%), Gaps = 64/423 (15%) Query: 2 FALCDV---------NAFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALG 48 D+ + F+ S R +L KPV V +++ + + N A+A G Sbjct: 314 IIHIDLLFESVKYFQDCFFVSVVIKNRLELHDKPVAVCHSDNPKGTAEISSANYPARAYG 373 Query: 49 VKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT 108 VK G KDL + +V N+E Y + S DEAF D++ Sbjct: 374 VKAGMFVRHAKDLCPQ--LVIVPYNFEAYEEAL-----------------SCDEAFLDVS 414 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 + + IR +L+ T + GI T +A+LA AK + + Sbjct: 415 DLSDVET-EVLASTIRNEILETTGCSASAGIGGTMLMARLATRVAKPAGQLY------IS 467 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 E+ + + LPV + G+G + +KL I+T L I+K E T Sbjct: 468 AEKVEEFLDQLPVGTLPGVGSVLKEKLVKQNIQTCGQLRLIS--KIKKRKKDAEEPTKYM 525 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G+ + S + D +++ ++ + Sbjct: 526 GCGDCDN-----------LSRSITVPAATDDIEVLQRISKKLFGSFCLDVKEVRGVGLQV 574 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPT---QDSRDIINAATRSLDAIWQAGHRYQKAGV 345 S + ++ + S QD + D + Sbjct: 575 S-KLDSADPSNKGSRTLKSWLSSAPAVVQIEQDDNVFAAKVRENSDCNRPVTGGVSRLRE 633 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLM----TVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 + S N E L ++ L+ G + I+++ Sbjct: 634 SNSEESSIQSGDTNSSLPPMCYLDMEVLENLPPELLSELDGTYG----GKLFELIEKKRG 689 Query: 402 MKR 404 +R Sbjct: 690 KRR 692 >UniRef50_B4H4B7 GL20704 n=1 Tax=Drosophila persimilis RepID=B4H4B7_DROPE Length = 811 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 47/270 (17%), Positives = 90/270 (33%), Gaps = 58/270 (21%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S P+ G P+ V + G Sbjct: 273 IMHIDMDCFFVSVGLRSHPEWRGLPIAVTHSKGGNAATDVPVHPQADRQAELKLFAERFE 332 Query: 37 ------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+A G++ G + L + Sbjct: 333 HQLHDNIRADKVRSGFDKKMSLSEIASCSYEARAKGIRNGMFVGQALKLCPELKTI--PY 390 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQR 130 ++E Y +++ + T+ + + +E S DE F DLT + D+ F +R V + Sbjct: 391 DFEGYKEVAFALYDTVAQYTLNIEAVSCDEMFVDLTDLVEDLQVDVMSFVAHLREEVRNK 450 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T G+ K LA++A AK + G M+ ++ + G+G Sbjct: 451 TGCPCSAGVGTNKLLARMATKRAKPDGQYLLGPGT-----DVLGYMAPTALETLPGVGSS 505 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNV 220 + KL+ G++ D+ T + V Sbjct: 506 LRHKLEQAGLRNCADVQRTQTGRRLNRWWV 535 >UniRef50_D0NYK2 Putative uncharacterized protein n=1 Tax=Phytophthora infestans T30-4 RepID=D0NYK2_PHYIN Length = 525 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 73/452 (16%), Positives = 129/452 (28%), Gaps = 80/452 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E G+PV V G ++A N +A+ GV+ GD K Sbjct: 9 VIIHLDLDCFYAQVEQRRLHIPDGQPVAV--QQWGSLLAVNYDARKFGVERGDFIDDAKK 66 Query: 61 LFRRCGV------------------VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDE 102 + + + Y S + + L + P +E SIDE Sbjct: 67 KCPQIHLPHVDTLGKNCKPGQLFDRTHQKAILRRYRIASRDIFAILGSMVPIIEKASIDE 126 Query: 103 AFCDLTGVRNCRDLTD---------------------FGREIRATVLQRTHLTVGVGIAQ 141 AF D+T + R REIR + + T GIA Sbjct: 127 AFMDVTDMAKERIAQTVYFCQDPANHDTKRLLCIGAVISREIRQAIYNKLGYTCSTGIAG 186 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG-- 199 K LAKLA+ K + + + LM +LP+ + G+G ++ K+L+ G Sbjct: 187 NKLLAKLASPLNKPNGQVVVASRFVID------LMKSLPMRKIRGLGGKLGKQLETAGES 240 Query: 200 -----IKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 T L + + KH +G + E + +I Sbjct: 241 FKKLSAHTF--LQRCGLIELAKHVGQETAAYVHSICQGSDDNEPVEEKKVQVKIT----- 293 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 + + E + + + S KL Sbjct: 294 ------------GVRLLCEEVVIRCEDERIENKRFPSQLSIQFIRAKPGEKP--RSYKLG 339 Query: 314 TPTQDS-RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 + ++ AA + + + +F + + + Sbjct: 340 IGQDTTVDELYTAAMNVMRLHVGSMFPMATLIMNAKNFHELDSQAV---ATISSFFTRDA 396 Query: 373 LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 L A+ + + R Sbjct: 397 GQAAPADLAAQRMEEEIKQFATKRDRDRSPTR 428 >UniRef50_Q6R286 SOS inducible DNA polymerase (Fragment) n=15 Tax=Enterobacteriaceae RepID=Q6R286_ECOLX Length = 395 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 156/156 (100%), Positives = 156/156 (100%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD Sbjct: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG Sbjct: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW Sbjct: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 126/126 (100%), Positives = 126/126 (100%) Query: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS Sbjct: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL Sbjct: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 Query: 390 YFAGQG 395 YFAGQG Sbjct: 390 YFAGQG 395 >UniRef50_UPI000038E47A DNA polymerase IV n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E47A Length = 350 Score = 168 bits (426), Expect = 3e-40, Method: Composition-based stats. Identities = 82/359 (22%), Positives = 138/359 (38%), Gaps = 28/359 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND-----GCVIARNAEAKALGVKMGDPWF 56 D + FYA E + P + KPVVV + G V N A+++G+K G P Sbjct: 4 IIFIDFDYFYAQVEEIMDPSIKDKPVVVCVYSGRTENSGAVATSNYIARSIGIKSGMPLP 63 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-D 115 + ++ + V + Y + S+RVM+T+ S ++EI SIDEA+ D+TG + D Sbjct: 64 QAMNIGKD-KAVFIPIRKDFYKEFSDRVMNTISTYSDKMEIASIDEAYLDVTGECSTFQD 122 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 G EI+ + + + V GI+ K +AK+ AK + + + Sbjct: 123 AVKLGEEIKEEIFKEYGMKVSAGISINKAIAKILGDMAKPDGLKY------IDESMVEEF 176 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPC 234 ++ L V + GIG +SKKL+ GIK + D+ + + + + V Sbjct: 177 LNTLEVKKIPGIGSILSKKLNDAGIKYLKDILGANRQAMIEILGNARYNYLVEIAENRYN 236 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 +EE ++ + E D + + A K + + I Sbjct: 237 SPVEE--RIRKNYGRYITLPENTRDTNIIMPLLRKAVDSAFSK--APGLPGEISAIGIM- 291 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR-YQKAGVMLGDFFS 352 E S S AT + I +A R ++ GV +G S Sbjct: 292 ------EDLNIVSRSYTGGRI--SLESAYGIATGLMGKILEADSRKLRRIGVRIGKMSS 342 >UniRef50_Q4DBR5 DNA damage repair protein, putative n=4 Tax=Trypanosoma RepID=Q4DBR5_TRYCR Length = 615 Score = 167 bits (423), Expect = 6e-40, Method: Composition-based stats. Identities = 61/415 (14%), Positives = 125/415 (30%), Gaps = 46/415 (11%) Query: 1 MFALCDVNAFYASCETV--FRPDLWGKPVVVLSNNDGC-VIARNAEAKALGVKMGDPWFK 57 +F D++AF+ S + KPV + + + + N A++ GV+ G Sbjct: 64 LFVHLDMDAFFCSVVLAKEENAHMREKPVCIAAGKGNSDISSSNYIARSFGVRAGMYVNA 123 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-----VEIYSIDEAFCDLTGVRN 112 K+L + S + ++ + L EL P VE+YSIDE + Sbjct: 124 AKELCP--NLQVLSYDLPRCEEVIKCLYRLLFELCPDKVCIAVEVYSIDEVMIAFDTENH 181 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + +R L T+ T GI L+++A AK + + Sbjct: 182 DVVKSYCANVLRQLELT-TNCTASCGIGPNIMLSRIATQYAKPNGVYS------ILPQDV 234 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD------------LADTDIRFIRKHFN- 219 +L+ +P ++ G+G KL + + D + + +++ Sbjct: 235 PELVGHMPFVEIHGVGSCTMTKLRPLLRPYLKDADISDDDILCCHVQKLSKQQLQRALGQ 294 Query: 220 VVLERTVRELRGEPCLQLEEFAPT----------KQEIICSRSFGERITDYPSMRQAICS 269 E RG Q+ + CS ++ R + + Sbjct: 295 KSGENFFHLCRGHDTRQVSRTGDEENQRMLGKKTPTSVSCSMNYAVRPLTLDDVWGILRE 354 Query: 270 YAARAAEKLRSEHQYCRFISTFI---KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 K+ + + + + G V+ P + + ++ Sbjct: 355 LLEVVCGKMDRGGYTSSGLRVTLLERHPLHPKETQKFMGRGRCVEFHVPINFEKPLRSSE 414 Query: 327 TRS-LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 L + + + +L L DD R + + + Sbjct: 415 LELMLSQVKDVVTPLFVLDRQMS--DEERARELGLEDDAESRVIWTVSLKTVKDI 467 >UniRef50_B4QLD4 GD13564 n=1 Tax=Drosophila simulans RepID=B4QLD4_DROSI Length = 940 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 54/465 (11%), Positives = 116/465 (24%), Gaps = 136/465 (29%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC------------------------- 36 D++ F+ S RP+L G P+ V + G Sbjct: 275 VMHIDMDCFFVSVGLRARPELRGLPIAVTHSKGGNAATDVPVHPQADRKAELELFAQRFE 334 Query: 37 ------------------------VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 + + + EA+ G++ G + L Sbjct: 335 HHFHDGDKAEKVRSGFDKKMSLSEIASCSYEAREKGIRNGMFVGQALKL----------- 383 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTH 132 P ++ D + + TV Q T Sbjct: 384 -------------------CPELKTIPYD-----------FEGYKEVAFTLYDTVAQYT- 412 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 L + ++ + +D + G+G +S Sbjct: 413 --------------------------LNIEAFLLDSKNDILAYLAPMSLDLLPGVGSSMS 446 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSR 251 KL G+ D+ T + + + + + RG L + ++ + Sbjct: 447 HKLKQAGLNNCGDVQKTTLWRLERVLGKKLGQNLFQNCRGIDDRPLA-YEQARKTVSAEM 505 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK---------TSPFALNEP 302 +FG R T+ Q +C + ++L + R ++ I TS + + Sbjct: 506 NFGIRFTNSAECEQFLCQLSDEVTKRLVEIKRKARSVNLKIMVRAAEAPVETSKYMGHGV 565 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ----- 357 + S + T D I + H + G+ L + Sbjct: 566 CDTINKSSLIKHATDDVNVITTVVLNLMREADIPPHELRGIGIHLTRLEDASAVRKENII 625 Query: 358 LNLFDDNAPRPGSEQL-MTVMD--TLNAKEGRGTLYFAGQGIQQQ 399 +F + + + + ++ G + + Sbjct: 626 KQMFGKMSEMKKDKPIPQEAVGGIAVSGAVGDDKVKKPSMFENKP 670 >UniRef50_B2VTY6 Sister chromatid cohesion protein Eso1 n=8 Tax=Leotiomyceta RepID=B2VTY6_PYRTR Length = 714 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 76/496 (15%), Positives = 151/496 (30%), Gaps = 113/496 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CETV KP+ V +IA N A+A G+ + Sbjct: 45 VIAHVDLDAFYAQCETVRLGIDPSKPLAV--QQWQGLIAINYPARAFGLSRHVTSTEALK 102 Query: 61 LFRRCGVVC-----------------------FSSNYELYADMSNRVMSTLEELSP---- 93 + + + Y S +++ ++E+ P Sbjct: 103 QCPELILQHVATWKEGDETWAYHENSFKDMATHKVSLDPYRQESRKILKCIKEILPDKDQ 162 Query: 94 RVEIYSIDEAFC---------------DLTGVRNCRDLTD-------------------- 118 RVE SIDE F +L G D T+ Sbjct: 163 RVEKASIDEVFMDLSAQVHTILLERYPELRGPAPYDDPTERLPKVPTTVLDWAADALVET 222 Query: 119 ----------------------FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 R++R + T GIA+ K L+KL + K Sbjct: 223 GEEDGEDRDPDWDDVCMVIASEIVRDVRKHIKDTLGYTCSGGIARNKMLSKLGSGYKKPN 282 Query: 157 QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM-GIKTVLDLADTDIRFIR 215 Q+ + + +S + + +G ++ ++ AM G V DL + + ++ Sbjct: 283 QQ------TVIRNRAVKHFLSDMKFTKIRMLGGKLGDEVVAMFGTDKVRDLVEQPLDQLK 336 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + + +RGE ++ + ++ ++SF I + + + + A Sbjct: 337 RLGDDTGTWIHSIIRGEDNSEVNP-RTQIKSMLSAKSFRPAIHSFEQGVRWLRIFVADIF 395 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ---DSRDIINAATRSLDA 332 + E + + L+ + S + P + + A L Sbjct: 396 SRCVEEGV----LENKRRPKSINLHHRQGAQTRSRQAPIPQGKPLSETILFDLAKNLLAQ 451 Query: 333 IWQAG--HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT--VMDTLNAKEGRGT 388 + G + +G F + ++ +M+ +M + Sbjct: 452 VVVDGRAWPCSNLSLSVGGFEDGITGNKGIGGFLVRGEEAKAMMSSTMMTAI-------- 503 Query: 389 LYFAGQGIQQQWQMKR 404 A G + + +R Sbjct: 504 GRSASSGGEPPAKKRR 519 >UniRef50_A4HNL7 DNA damage repair protein, putative n=3 Tax=Leishmania RepID=A4HNL7_LEIBR Length = 624 Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats. Identities = 58/362 (16%), Positives = 117/362 (32%), Gaps = 52/362 (14%) Query: 2 FALCDVNAFYASCETVFRPD---LWGKPVVVL-SNNDGCVIARNAEAKALGVKMGDPWFK 57 F D++AF+ S + +P+ L KPV + + + + N A++ G+ G Sbjct: 63 FLHVDMDAFFCSV-QLAKPEYAHLRTKPVGIAAGKYNSDISSCNYLARSYGIHAGMYVNS 121 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-----VEIYSIDEAFCDLTGVRN 112 K+ +V + E ++ + + E P +E+YSIDE T + Sbjct: 122 AKERCPE--LVTLGHDLEACERVAKTLYRIIFESFPASVKMSMEVYSIDEVML-ATDTTD 178 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 L F +R + T T GI LA++A K + + + Sbjct: 179 YGLLQSFCEAVRKELFSTTGCTASCGIGPNIMLARVATDCCKPNGI------LVVHAKDV 232 Query: 173 RKLMSALPVDDVWGIGRRISKKLDA-------------MGIKTVLDLADTDIRFIRKHFN 219 + M++LP+ + G G +K+ G T + +++ Sbjct: 233 PQTMASLPLKYIHGAGESTMEKICRALREQHVIDENTDAGDVTCGSVQRLRREVLQRILG 292 Query: 220 V-VLERTVRELRGEPCLQLEEFAPTKQE----------IICSRSFGERITDYPSMRQAIC 268 E +RGE + ++ + + CS ++ R D + + Sbjct: 293 KRHGETFYHLVRGEDSRVVTRTGDSEDQRHLGKRTPSVVGCSMNYAVRPEDIEDVWGIVR 352 Query: 269 SYAARAAEKLRSEHQYCRFISTFI---------KTSPFALNEPYYGNSASVKLLTPTQDS 319 KL+ + + + + +T + +KL Sbjct: 353 QLLDHVCAKLQRANTVAQGLRITLLERHPLYPKETQKYMGRGKCVEVHLPIKLPHAMAAD 412 Query: 320 RD 321 Sbjct: 413 EV 414 >UniRef50_UPI0001850634 polymerase (DNA directed) iota n=1 Tax=Nasonia vitripennis RepID=UPI0001850634 Length = 635 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 76/455 (16%), Positives = 133/455 (29%), Gaps = 91/455 (20%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 DV+ FYA E + P+ GKP+ V V+ N EA+A GVK + L Sbjct: 26 IVHIDVDYFYAQVEMMRHPEFQGKPLGV--QQKNIVVTCNYEARAFGVKKCMLIEEALRL 83 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR 121 +V + Y MS +++ L + + VE +DE F D+T V N T G Sbjct: 84 CPSLILVKGE-DLTPYRRMSAKILELLHQFTSSVEKLGLDENFIDVTSVVNEYT-TRIGN 141 Query: 122 EIRATVLQR---------------------------------THLTVGVGIAQT------ 142 +++ + +A + Sbjct: 142 NSKSSQHDENTTREESTFVQQEDMDHCMPVGKIFSTPEEECPCGCHTRLAVASSIAMDMR 201 Query: 143 ------------------KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 K LAKL K Q+ ++L V + Sbjct: 202 SKILNELGLTCSAGIAHNKLLAKLGGAVNKPNQQTVVYPCSAASLLSSLG-----SVSKI 256 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPCLQLEEFAPT 243 G+GRR ++ L A I TV D+ T + ++ L R G ++ Sbjct: 257 PGVGRRTAESLTANNILTVDDVRKTPLERLQVKIGKELARKIKDYAEGIDDTPVKPSGRP 316 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP------F 297 Q I F + ++ + + + R E + + + ++ Sbjct: 317 -QSIGLEDGFKK-VSLVDEVESRLSALLRRLTELAAEDGRIPICLKLTVRKQDSINKPAA 374 Query: 298 ALNEPYYGNSASVKLL------------TPTQDSRDIINAATRSLDAIWQAGHR--YQKA 343 A + S + T D I+ + + Sbjct: 375 AGSSTGKRESRQCAIPSHLVPSSKGAKGTHLYDHTKILALVMKLFHRVVDISKPFHLTLL 434 Query: 344 GVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 G+ F + + N + + +VMD Sbjct: 435 GLAFTKFQEEKCSGKN--SIASFLRKQVAVQSVMD 467 >UniRef50_B9SQ81 DNA polymerase eta, putative n=1 Tax=Ricinus communis RepID=B9SQ81_RICCO Length = 560 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 123/389 (31%), Gaps = 41/389 (10%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E +P L G P V+ G +IA + EA+ GVK + Sbjct: 13 IIAHVDMDCFYVQVEQRKQPQLRGLPTAVVQYNEWKGGGLIAVSYEARKFGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K++ + +V ++ +Y + + V+S L R E SIDE + DLT Sbjct: 73 AKEVCPQILLVQVPVARGKADLNVYRNAGSEVVSILARKG-RCERASIDEVYLDLTDSAE 131 Query: 113 CR---DLTDFGREIRATVLQR--THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + I VL+ L G + + + + + + Sbjct: 132 AMLKDTPPNSLDVIDDEVLKSHVLGLKNENGNDAKEDVREWLCRNDADHRDKLLACGAII 191 Query: 168 NLERQRKLMSALPVDDVWGI-----------------GRRISKKLD-AMGIKTVLDLADT 209 E + +++ GI G ++ L +G+ TV DL Sbjct: 192 VAELRMQVLKETEFTCSAGIAHNKMDCNILFDCRKQLGGKLGSSLQNELGVDTVGDLLQF 251 Query: 210 DIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQA 266 ++ + + RG +++ + +SF + S++ Sbjct: 252 SEEKLQDRYGINTGTWLWNIARGINGEEVQGRLLP-KSHGSGKSFPGPQALKTIASVQHW 310 Query: 267 ICSYAARAAEK----LRSEHQYCRFISTFIK-TSPFALNEPYYGNSASVKLLTPTQDSRD 321 + +E+ L + ++ + S S L T ++ Sbjct: 311 LNQLCEELSERLCSDLEQNKRMAHTLTLHASAYKSSDSDSHKKFPSKSGPLRYGTAKIQE 370 Query: 322 IINAATRSLDAIWQAGHRYQKAGVMLGDF 350 ++ + H + G + Sbjct: 371 DAFNLFQAGLREYLGAHGVKVLGSHHNGW 399 >UniRef50_B2I405 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I405_ACIBC Length = 228 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 89/219 (40%), Positives = 134/219 (61%), Gaps = 5/219 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D+N YAS E F P L KP+++LSNND ++AR+ EAK LG++MG P FK KD Sbjct: 5 IFALIDINNCYASIERFFNPQLIDKPIIILSNNDTSIVARSDEAKLLGIRMGVPVFKIKD 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEEL--SPRVEIYSIDEAFCDLTGVRNCRDLTD 118 + +R VV SSNY +Y +MS R S + + +E+YSIDEA+ LT + DLT+ Sbjct: 65 IIKRNNVVMLSSNYTVYGEMSRRFHSIINQFVTDQEMEVYSIDEAWLLLTNYESLFDLTE 124 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS--NLERQRKLM 176 + I+ + + L V VG+ ++KT AKL N AKK + GV DL + + + Sbjct: 125 YAHTIKKEIFRLIGLPVSVGLGRSKTEAKLGNFLAKKMKHFN-GVCDLVNMDPLIKEDIF 183 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 +P+++VWG+G +I+K+L+ G +V DLA + +I+ Sbjct: 184 QDIPLNEVWGVGSQIAKQLNNFGFSSVYDLAVANPVWIK 222 >UniRef50_A7AX68 ImpB/MucB/SamB family protein n=1 Tax=Babesia bovis RepID=A7AX68_BABBO Length = 1246 Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats. Identities = 51/449 (11%), Positives = 137/449 (30%), Gaps = 60/449 (13%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALGVKMGDPWFK 57 D++AF+ S + L P+ + + N A+ GV G Sbjct: 432 IFHIDMDAFFVSVAIKGKQHLKNMPLCISYGTGRNSASEIATCNYAARVYGVSKGMWVRD 491 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 L + ++++ D + +++ E++ ++ S DE + + + D+ Sbjct: 492 AVQLCPS--LQFVKYDFDVINDTAMKILKIASEVTNKIYSASCDELYLEYSIESESNDIV 549 Query: 118 D---FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK--KWQRQTGGVVDLSN---- 168 + + + T + +GI LAKLA+ K K + + + Sbjct: 550 EYISMAVNLAHKIETETECPLSIGIGDNMMLAKLASQRCKALKHGSEEVPTGYVLSGNVC 609 Query: 169 -LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTV 226 ++ ++++ + ++ G+G R L + G D+ D +++ + + Sbjct: 610 AIQDVEAFIASVSLHELPGVGDRTLDILKSCGYVYCSDI--HDKEELKELIGEKLGDTVY 667 Query: 227 RELRGEPCLQLEEFAP-----TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE 281 RG+ + + I + ++G RIT + + + + +++ + Sbjct: 668 HFSRGKDFRNMNTAEARSRILKNKTITSAINYGVRITTTEQVHEYMRELVKQVWDRVEAA 727 Query: 282 -----------------------HQYCRFISTFIKTSPFALNEPY--YGNSASVKLLTPT 316 R ++ + + + +S S L++ Sbjct: 728 LTHLKEESTDNNSLEVPVAQIMLKVRVRSPEASVEPAKYMGCGLCDEFTSSVSGDLMSQK 787 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 R +++ A + + + + N D + Sbjct: 788 SVFRSLLSCWQNLFAKKPFALEDLRGISLGIYRIKKGDCKERNTMDKF-----------L 836 Query: 377 MDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 + ++ + +R Sbjct: 837 VAATPSRLPDDIYPICRTMPLESATPRRN 865 >UniRef50_C5LMV6 Dna polymerase eta, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LMV6_9ALVE Length = 945 Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 83/386 (21%), Positives = 131/386 (33%), Gaps = 40/386 (10%) Query: 2 FALCDVNAFYASCETVFR---PDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWF 56 + LCD ++F+A + P+ KP+ V + + N A+ GV Sbjct: 496 YMLCDFDSFFACVAQLQATGVPE-STKPMAVVSGMGRGSEICSANYAARKYGVSGSMWLA 554 Query: 57 KQKDLFRRCGVVCFSSNY-----ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR 111 + K L V +S + M + RV S+DEA D++G Sbjct: 555 EVKALCPDLEKVPVTSELLTQCNTAWKQMLRLMAVVGGGTLDRVVAKSVDEAIVDVSGEC 614 Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 D + ++ V Q T L VG+A + LAK+A AK + Sbjct: 615 GYSDEAAVAQALQKAVTQATGLPCSVGVADSHVLAKVATTQAKPRGIKVLND-------- 666 Query: 172 QRKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIR-FIRKHFN-VVLERTVRE 228 + ++ LP+ + +G R KL G+ T+ DL D +I + F ER + Sbjct: 667 -KSFLADLPLHMLPQVGYRTLGKLQNEFGLATIGDLLDPNIAPLLADSFGAKTAERMLTN 725 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 RGE + + ++FG R S RQ + + A+ L + Sbjct: 726 ARGEDYR--NDLVTDISTVSADKNFGIRNVTPESARQLVRALVAQVMPLLE--GLVPERV 781 Query: 289 STFIKTS--------PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRY 340 + + F Y S S T DI A LD + HR Sbjct: 782 ILRLYLAPDDWVEPFKFMGIGACYQWSRSC---AVTPSKNDIAALAIGLLDGV--EVHRI 836 Query: 341 QKAGVMLGDFFSQGVAQLNLFDDNAP 366 + AGV + D N Sbjct: 837 RGAGVAVRVHPKDQSHNAATGDKNQR 862 Score = 124 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 72/419 (17%), Positives = 128/419 (30%), Gaps = 75/419 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKAL-GVKMGDPWFKQK 59 + AL D++ FYA E P VV + V+A + A+ L GV+ G + Sbjct: 7 VIALFDLDCFYAQVERRRLGIPSSVPFVV--SQWDMVLAVDYSARKLPGVQRGALTSIAE 64 Query: 60 DL-----------------FRRCGVVCFSSN-----YELYADMSNRVMSTLEELSPR--- 94 F + + Y + S VM L P Sbjct: 65 KAGAKSAHVEVVDVVTGETFPDGPPPGEPRDRYRVSLDRYREASEEVMRALRTALPESAP 124 Query: 95 VEIYSIDEAFCDLTGVRN----------------------CRDLTDFGREIRATVLQRTH 132 +E SIDE F DLT + ++ + +R V T Sbjct: 125 LERASIDEVFVDLTSLCEEEQEEQMPAGIKWAAGEVGNSALQEGAIWAERLRKEVESITG 184 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 T+ G+A + LAKLA K V + + M+ + V + G+GR Sbjct: 185 FTMSAGVASNRQLAKLACGVNKPDA------VTALSDNKILDFMAGVKVKSLRGVGRATF 238 Query: 193 KKLDAM-----GIKTVLDLAD-TDIRFIRKHFNVVLERTVRELRGEPCLQL-----EEFA 241 ++++ G ++ D ++ RG ++ + + Sbjct: 239 HDIESLLPCLTGDTKCGEIWPVLDELDPDPANAELVAWLKLASRGRDPVENAKPVKDSES 298 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR-SEHQYCRFISTFIKTSPFALN 300 + S+ F + + M+ I S A +++R Q+ + + + Sbjct: 299 LKAGSVSASKIFRPYLKEAAKMQFWIESLAKDVVDRVRGRAPQFPKSLCVSLGR-----E 353 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S + P D I A + + + R V D Q Sbjct: 354 ATATYATKSRRCPMPALDKVII--TAQQMAAPLIASFGRVGMITVTALDLQDPPAHQPG 410 >UniRef50_A4EK23 DNA polymerase IV-AMBIGUITY n=3 Tax=Rhodobacteraceae RepID=A4EK23_9RHOB Length = 452 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 90/406 (22%), Positives = 143/406 (35%), Gaps = 26/406 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 D ++F+A+ E F P L G+PV V+ + IA + EAKALGVK + Sbjct: 21 LYLDFDSFFATAEQHFNPALRGRPVGVVPLDSPHTGCIAISREAKALGVKSMARIADTRR 80 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 + V + +++Y + NR++ + + P + SIDE C L Sbjct: 81 IVPDMIFVV--ARHDVYVRLHNRIVDVVNTVVPVAHVRSIDEVVCHLLPSEAREG-RALA 137 Query: 121 REIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 I+A + LT +GIA T+ LAK+ A K L L ++ Sbjct: 138 DRIKAALAAAFSPELTCSIGIAPTELLAKIGAEAHKPDG------FALIELADLPASLAH 191 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQL 237 + +DD+ G+ + K+L A G+ L + R + +V ER EL G+ +L Sbjct: 192 IALDDLPGVSDGMEKRLQAAGVTDFQSLWALAPKQARAIWRSVEGERFWNELHGQHAERL 251 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 K+ SR + A AA +LR ++ K + Sbjct: 252 PT---QKRMFGHSRMLPADWRTPQKVTICARQLALGAARRLRRADLRATKLTLGFKGGGY 308 Query: 298 ALNEPYY----GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 L D + A A G + VML + Sbjct: 309 RGRSGSRKDDLRWDWEGHFLPTRDDHTVLATLAQGLDAAQRAVGFPPRSVSVMLHGLIAN 368 Query: 354 GVAQLNLFDDNAPRP-----GSEQLMTVMDTLNAKEGRGTLYFAGQ 394 +LF E + +MDTL + G + GQ Sbjct: 369 EQMTNDLFLTPTAPEQINISRWEAVSDLMDTLRQQHGPEAISLGGQ 414 >UniRef50_Q828V5 Putative uncharacterized protein n=3 Tax=Streptomyces RepID=Q828V5_STRAW Length = 324 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 59/326 (18%), Positives = 108/326 (33%), Gaps = 19/326 (5%) Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD--LTDFGREIRATVLQRT 131 +Y ++ LEE +P VE D A DL G +F IR L Sbjct: 11 PPMYEAALPGLLGLLEEFTPVVEALPPDGALVDLRGAERYFGRGTVEFASLIRVRALAHY 70 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN--LERQRKLMSALPVDDVWGIGR 189 + +G LA++A A GV + + + ++ PV + G+G Sbjct: 71 GIDCAIGAGPGPMLARMALRDAVP------GVTRVVPEEPDAVAEFLAERPVVALPGVGH 124 Query: 190 RISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEII 248 ++ L G+ T+ +A + +++ + G ++ + + Sbjct: 125 ATARTLCEYGLDTLGKVAAAPLSTLQRLTGARTGRELREKASGIDRGRVVP-NAVSRSLT 183 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 R F D R+A+ S +LR+ Q CR ++ ++ + + Sbjct: 184 AERPFPRDEVDPSRHRRALLSVTEELGTRLRTLEQVCRTLTLTVRYAD------RSSTTR 237 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 S L PT S + A R +A+ R + + A L + Sbjct: 238 SRTLAEPTAHSAALTATAYRMYEALGLQRARVRAIALRAEGLSPAEDAAHQL-TFDPVDE 296 Query: 369 GSEQLMTVMDTLNAKEGRGTLYFAGQ 394 ++ V D AK G + Sbjct: 297 KVRRIEEVADRARAKFGPRAIVPGAL 322 >UniRef50_UPI000192707B PREDICTED: similar to predicted protein, partial n=1 Tax=Hydra magnipapillata RepID=UPI000192707B Length = 850 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 50/258 (19%), Positives = 96/258 (37%), Gaps = 18/258 (6%) Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 D+ D +IR + + T T GIA+ LAKLA AK + Sbjct: 1 DVYDLAEKIRKDIFEETKCTASCGIAENILLAKLATKQAKPNGVCY------IQKCDVPE 54 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEP 233 +++ V ++ GIG S+KL ++ I T DL + F++K F + E RGE Sbjct: 55 FIASQKVCNLPGIGAIYSEKLSSLSILTCADLQKFSLFFLKKEFGQKLGEMLYNFCRGED 114 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 L+ + ++ + ++G R + + + I + + +L + + I+ + Sbjct: 115 SRTLKLYE-ERKSVSAEINYGMRFSSMKEVEEFIDQLSKQVEVRLTEAEKKGKLITLKMM 173 Query: 294 --------TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 + + S S+ + +PT S I + L + G+ Sbjct: 174 IRQKGEGNPLKYMGHGLCDNVSKSIMISSPTNSSELISRYCLQLLHLFTVIAQDIRGIGI 233 Query: 346 MLGDFFSQGVAQL--NLF 361 + + +LF Sbjct: 234 QVTKLSDNIIQNKAVDLF 251 >UniRef50_B6VBS6 Putative uncharacterized protein n=1 Tax=Caenorhabditis sp. PS1010 RepID=B6VBS6_9PELO Length = 975 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 61/307 (19%), Positives = 105/307 (34%), Gaps = 75/307 (24%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNND----GCVIARNAEAKALGVKMGDPWF 56 + L D++ FYA E +PDLWGKPV+V+ ++ G ++A + EA+ G+K G Sbjct: 674 IIGLIDMDCFYAQVEQRDQPDLWGKPVIVVQHSRQGVLGGILAVSYEARTFGIKRGMTVT 733 Query: 57 KQKDLFRRCGVVCFS-------SNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDL 107 + K V ++ + Y D S V L + VE S+DEAF DL Sbjct: 734 EAKAKCADLNVCHVPIGEYADKADIQKYRDASAEVFEVLNNIDSNIIVEKASVDEAFLDL 793 Query: 108 T----------------------GVRNCRDLTDFGREIRATV------------------ 127 + + D D + Sbjct: 794 SIYIEKILEVEQETELSDIIGALPTTHIADGNDKKETEEERIDRIAKFYEETKSDENQKK 853 Query: 128 ---------------LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 ++T GI K +AKL K Q+ + + Sbjct: 854 LMIAAIAIEDIRAKIREKTQFYCSAGIGNNKMMAKLVCARHKPRQQ------TIIPFQYV 907 Query: 173 RKLMSALPVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 R ++ P+ D+ G G ++ K ++ + IKT+ ++ + + + F E G Sbjct: 908 RDILKVTPIGDIRGFGGKMGTKIMEMLKIKTMGEILTIEFERVVEAFPEQHEYLKCVAEG 967 Query: 232 EPCLQLE 238 + Sbjct: 968 YDDEPVH 974 >UniRef50_C4Q962 Rab geranylgeranyl transferase alpha subunit, putative n=1 Tax=Schistosoma mansoni RepID=C4Q962_SCHMA Length = 1262 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 66/401 (16%), Positives = 111/401 (27%), Gaps = 91/401 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFYA+ E RP+L PV V SN + N A+ GV+ G P F K Sbjct: 712 LIVHVDMDAFYAAVEIRDRPELRHHPVAVGSN--SMLSTSNYIARRFGVRAGLPGFLGKK 769 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 L + ++ ++ Y S V S L E + V Sbjct: 770 LCPQLKII--PCDFVKYTAASRVVRSILMEYT--VSA----------------------- 802 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM---S 177 T + + ++ A V +R + Sbjct: 803 -----------GNTQNPCESDNIPFSAVSLDEA-YLDITDHLVDRCDFPIERRTFWPRSA 850 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 V GIG ++LDA GIKT DL D + +R G + Sbjct: 851 PGAPMLVPGIGHVTERRLDAFGIKTCADLIDKRGLLWHVSTKTSMIYYMRIALGHSDDRW 910 Query: 238 EE-------------------------------FAPTKQEIICSRSFGERITDYPSMRQA 266 ++ + R+F +D + Sbjct: 911 LTNIKNNFDEKSNKSFGFIDNDSENSVPSIQGQVELNRKSMSVERTFS-DTSDENELMHR 969 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 A + L+ EH + I+ +K F + + S L T + I + Sbjct: 970 CEQLAQMLSTDLKEEHVKGQLITLKMKLDTFEIR------TRSQLLPDYTNHTEIINSFG 1023 Query: 327 TRSLDAIW---------QAGHRYQKAGVMLGDFFSQGVAQL 358 L + G+ + + + Sbjct: 1024 RELLREEMVAFKSNPAVNKPLTLRLMGLRMSNLLPVEMCPQ 1064 >UniRef50_B7QI10 DNA polymerase eta, putative n=2 Tax=Ixodes scapularis RepID=B7QI10_IXOSC Length = 727 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 66/335 (19%), Positives = 100/335 (29%), Gaps = 90/335 (26%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSN---NDGCVIARNAEAKALGVKMGDPWFK 57 + +L D++ FY E P+ GKP V G +IA N EA+ALGVK G + Sbjct: 9 VISLVDMDCFYVQVEQRLAPEWKGKPCAVAQYNTFQGGGLIAVNYEARALGVKRGMRGEQ 68 Query: 58 QKDLFRRCGV-----VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 L + + ++ Y D V+S L + V+ SIDEA+ DLT V Sbjct: 69 ALKLAKDLHLFRVPEQRGKADLTRYRDAGAEVLSVLCQFGAVVQRASIDEAYLDLTPVVT 128 Query: 113 ------------------------------------------------CRDLTDFGREIR 124 IR Sbjct: 129 AQATFPSPDSLPSTHVVGYPEERGVRSREEAVAEWLSTIVDPGGGDSLLARGCALVERIR 188 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR-------------------------Q 159 A VL++T G+A K LAKL K Q+ Sbjct: 189 AAVLEQTGFDCSAGVAHNKVLAKLVCGLHKPRQQTVLPHSAVPTLFATLPVLAKLVCGLH 248 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 + L + LPV + +G ++ + + L + F Sbjct: 249 KPRQQTVLPHSAVPTLFATLPVHKLRNLGGKLGEDVREK-------LQVSQDYLCLSVFG 301 Query: 220 -VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 + + RG + Q I C ++F Sbjct: 302 HRTGQWLYKLARGVDDEPVTCRKLP-QSIGCGKNF 335 >UniRef50_A7I053 DNA-directed DNA polymerase n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I053_CAMHC Length = 299 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 63/310 (20%), Positives = 121/310 (39%), Gaps = 20/310 (6%) Query: 83 RVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 ++ L +P +E YSIDE F DL+G+ F ++ +L+ +L V +GI+ Sbjct: 6 KLYKFLYTFTPDIEQYSIDEFFLDLSGINVKNGHLKFAEFLQNEILKIFNLPVSIGISDA 65 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 K +AKLA AK + + + N + + + + G+G+ + K+L+ +GI T Sbjct: 66 KYIAKLATDLAKPFGIK------MINSDELDSTLKNVDIVKFPGVGKSMLKRLNKLGIFT 119 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 + D+ +FI + F + + G L+ ++ SR+F + + D Sbjct: 120 LGDVKKV--KFIFEKFGKNGIKLYENITGTGDNLLQ-INKKRKSFSHSRTF-KAVFDRNE 175 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 +++ I + Q I+ S S + + +I Sbjct: 176 IKRRILILCRYICFDVYKFGQNPTNYELKIRYSD----RITLSGSITYRNKFYENVLHEI 231 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 +N D V +G+F A+ NLF + + ++ + + Sbjct: 232 MNDLFIKCDKF--ETKSIIYISVCVGEFT--NRAEQNLFSEMKQ--NNTEIDKAVHKIRE 285 Query: 383 KEGRGTLYFA 392 K G +L FA Sbjct: 286 KYGIDSLLFA 295 >UniRef50_D1BE66 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BE66_SANKS Length = 346 Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats. Identities = 72/361 (19%), Positives = 122/361 (33%), Gaps = 23/361 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D +AF+AS RP+L P+ V+ V + N A+ALGV G Sbjct: 7 LHADADAFFASVVLRSRPELVAVPMAVV--AHVFVASANYPARALGVTGGMLADDALRQH 64 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGRE 122 +V + + + E + VE S++EAF D+ G + Sbjct: 65 PGLVLVDVPRAEV--EEAGDALFDLFHECARAVEPGSVEEAFLDVGASDWDA-AVAAGHD 121 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +R L V VG+ +TK +AKLA+ A K + ER+ +L +ALP+ Sbjct: 122 LRRRAAAELGLPVSVGVGRTKLMAKLASRATKPDGLH------VIGPEREAELRTALPLG 175 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFA 241 +VWG+G +L +G++ + DL D +++ + R R G + Sbjct: 176 EVWGVGAATRDRLANLGVQRLGDLDDVPRALLQQACGTAMARRLWRIRDGTDDATVRTVE 235 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 + G D + + ++ + Sbjct: 236 ARSVISAEGATSGYGRADLSTADLVASCAVRACRRA-ARAGLVAAGLVLTLRAEGGSPVV 294 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLD-AIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 L T D++ A + A+ + V L G+ Q L Sbjct: 295 VK------RSLAEATSSPEDVLPVARDLVATALADEVATVR---VSLTGLLPAGLVQQTL 345 Query: 361 F 361 F Sbjct: 346 F 346 >UniRef50_C3RLA4 DNA polymerase IV n=4 Tax=Bacteria RepID=C3RLA4_9MOLU Length = 250 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 98/260 (37%), Gaps = 17/260 (6%) Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 +A+ K + +++M L + D++GIG++ KL A+GI T+ D+A Sbjct: 1 MASDMKKPMGI------TILTRSNLKEIMWPLDIKDMFGIGKKTQPKLKAVGINTIGDIA 54 Query: 208 DTD-IRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + D +R+ R+ G ++ + + S + D +R Sbjct: 55 NYDNYNKLRQIIGKNALLLYRKANGIDNSAVDAKQNELKSVGNSTTLPYDTNDEEILRDT 114 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + S A + + + + IS IK + F + + + D I++ A Sbjct: 115 LKSLARQVSARANKRNLISNSISITIKYTRFE------SVTRQTTVNSFINDYETILSTA 168 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS---EQLMTVMDTLNAK 383 DA + +G + G+ L + ++ + L + + L +++ +N K Sbjct: 169 KMLFDANY-SGRPVRLLGISLNNTINKKNYKEQLNIFEMAQEDETNDDSLEQLLNAINNK 227 Query: 384 EGRGTLYFAGQGIQQQWQMK 403 + + A ++ Q K Sbjct: 228 FDKKLVTKASSFAKKTPQKK 247 >UniRef50_B4VAW5 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4VAW5_9ACTO Length = 352 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 64/346 (18%), Positives = 122/346 (35%), Gaps = 22/346 (6%) Query: 55 WFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR 114 +++ L + + +LYA + + E ++PRV+ D A D+TG Sbjct: 1 MAERRILHAHWHLPHND-DTDLYAQLL----AIAEGITPRVQAIEPDAAHLDITGALRYW 55 Query: 115 --DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 D +R + + +A + LA +A A G+ + Sbjct: 56 QRDPEGVAALLRLRTMALHGVQTTCAVAPNRMLATMAAAA------TPPGMTTVIYTGDV 109 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRG 231 + + PV ++GIG + KL G+ T+ D+A+T + + + F G Sbjct: 110 ERWLRPRPVAALYGIGPATAAKLRTYGLHTIGDVAETPLPTLVRLFGASAGRSLQAHAHG 169 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + ++ P + + R+F D R+ + A A +LR Q ++ Sbjct: 170 QDPRTVQTQ-PIAKSLAADRAFEHDALDPAEHRRTLLDLAEEVAARLRDGQQAAGGLALS 228 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 ++ + ++ L T +R I A D + R + G+ D Sbjct: 229 VRYAD------RSTSTRRRTLAEATAHTRPIATTAYELYDLLALQRARVRAIGLRAHDLR 282 Query: 352 SQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 A L +A + + V D A+ G GT+ A + Sbjct: 283 PSSEATQQL-TLDAGDDRALAIEAVTDRARARYGTGTIRPAALAKR 327 >UniRef50_C6VUA5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VUA5_DYAFD Length = 503 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 56/407 (13%), Positives = 113/407 (27%), Gaps = 27/407 (6%) Query: 16 TVFRPDLWGK--PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 RP+L+G + V V A +AEAKALG++ G + + ++ Sbjct: 19 IRVRPELYGLEFALAVPERGRMVVTASSAEAKALGIEAGMVVADARAILPS--LIVLDDE 76 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 E+ + +P V + + D D+TG + L + Sbjct: 77 AEVARQALRSLAEWCLRYTPTVALDTPDGLILDITGCAHLWGGEKAYVHDLIAKLHQAGY 136 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 T +A T A H G + + LP + + + Sbjct: 137 TARAALAGTVGAAWAHAH--------FGVSGTIVAPGEPHNGLLKLPPAALR-LPPETVE 187 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 K+ +G + R +R+ F L + + G +E T Sbjct: 188 KMQKLGFYYIGGFVRIPARMLRRRFGEDLMEKLNKALGYAHEFIEPIRQTTP-YQERLPC 246 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 E I + A+ +L E + R + + + + Sbjct: 247 LEPIVTATGIEIALQKLLETLCGRLAKEGKGLRKSVLRCYRVDGQVQRIDIVTNRASHHV 306 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 + G + + + V Q ++D S + Sbjct: 307 KH-------LFRLFELKIKTIAPGFGIELFLLEAPEVEDMSVTQETMWDTTGGFE-SAAI 358 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 ++D + + G ++ + W + L T + + Sbjct: 359 TELLDAVTGRTGTDAVHR-YLPDEHHWPERSVKLV----TSLREQPK 400 >UniRef50_Q4SL60 Chromosome 17 SCAF14563, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SL60_TETNG Length = 671 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 70/410 (17%), Positives = 120/410 (29%), Gaps = 71/410 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E P L P VV G +IA + EA+A GV Sbjct: 8 VVALVDMDCFYVQVEQRINPALKNTPCVVAQYKTWKGGGIIAVSYEARAHGVTRNMWVDD 67 Query: 58 QKDLFRRCGVV-----CFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K L V ++ LY + S V+ + +E SIDEA+ DLT Sbjct: 68 AKKLCPDLQVARVRESHGKADLTLYREASVEVIEVMSRF-AVIERASIDEAYMDLTAAVQ 126 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 R +I+A +L+ T++ G A + + Sbjct: 127 QRLKDLNNWQIQAHLLKATYVQ---GFPPNPPERPAATEDVAHDREEQ-------RARGL 176 Query: 173 RKLMSALPVDDVWGIGRRISKKLD-----------------------AMGIKTVLDLADT 209 ++ ++ LP + G + S +L + GI LA Sbjct: 177 QQWLAMLP---LPAAGEQSSAELQLAVGALIVEEMRAAVEKDTGFRCSAGISHNKVLAKL 233 Query: 210 ------DIRFIRKHFNVVLE-----------RTVRELRGEPCLQLEEFAPTKQEIICSRS 252 R V E RG ++ + I CS++ Sbjct: 234 ACGLNKPNRQTLLPLGSVGELFSSLPIGKIQWLYDLCRGVDFEAVKPRQLP-KSIGCSKN 292 Query: 253 FG--ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT-SPFALNEPYYGNSAS 309 F + ++ + A E+L + + ++ + ++ S Sbjct: 293 FPGKTSLATKEQVQYWLNQLALELEERLTKDREANGRVAKMLTVGVRQLGDKRPSSFSRC 352 Query: 310 VKLLTPTQ-----DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 L+ DS II + + + F Sbjct: 353 CALVRYEATKLATDSFAIIRSLNTAGPHQATWTPPLTMLHLSATKFSDAP 402 >UniRef50_A9SDY0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SDY0_PHYPA Length = 680 Score = 155 bits (391), Expect = 3e-36, Method: Composition-based stats. Identities = 53/361 (14%), Positives = 120/361 (33%), Gaps = 52/361 (14%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA+ E V +P+ V +IA N A+A+G+ + + Sbjct: 9 VVLHADLDCFYAAVEQVRLGIPTEQPLAV--QQWDGLIAVNYAARAVGIVRHERVSEALR 66 Query: 61 LFRRCGVVCFS--------------------SNYELYADMSNRVMSTLEELSPRVEIYSI 100 +V ++ E Y S +V + S E SI Sbjct: 67 KCPDLHLVHVETIGGDKPGTPESLGPRGNAKASLERYRQASAKVFNIFRRYSKLCERASI 126 Query: 101 DEAFCDLTG-----VRNCRDLTDFGREIRATVLQRT---HLTVGVGIAQTKTL------- 145 DEA+ D++ + D + T + V + + + Sbjct: 127 DEAYLDVSEQVEEMLEKDMDWESELHRLLEPTGSETTSKGVPVMLIEGGSLAIYNAYDRR 186 Query: 146 ----AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGI 200 + +A+ + + G + + LM ALP+ + +G ++ +++ G Sbjct: 187 LLAGSIIADRMRASVRNELGYTISVIPPRAVPGLMKALPLKKIKLLGGKLGEEMTKKWGC 246 Query: 201 KTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 T + + F + ++G Q++ + ++ S+SFG I + Sbjct: 247 TTAGEAQQIPHAALVACFGDRLGTYAWKAVQGLKAEQVQ-VKDLVKSMLASKSFG-AINE 304 Query: 260 YPSMRQAICSYAARAAEKLRS----EHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 +R+ + + A ++ + + + ++ F + + S S + Sbjct: 305 LAGIRRWLSVLSHDLAIRMSRDFEMNQRQPKVFQLYYRSGKFKNSADH---SRSAPMPRS 361 Query: 316 T 316 Sbjct: 362 V 362 >UniRef50_A8JCD8 DNA polymerase eta/iota n=1 Tax=Chlamydomonas reinhardtii RepID=A8JCD8_CHLRE Length = 873 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 109/307 (35%), Gaps = 47/307 (15%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D++ FY E +PV V +IA N A+A GV + K L + Sbjct: 28 DLDCFYCQVEQKRLGIPREQPVAV--QQWDGLIAINYAARAAGVTRHMRVREAKKLCPQL 85 Query: 66 GVVCFSSNYELYAD------MSNRVMSTLEEL---------------------------S 92 +V + + S ++M+ L + Sbjct: 86 RLVHVETISAGDGESGSPVKASGQIMALLGSMLRPSAAATAATAAGGGAATATGPVSGGG 145 Query: 93 PRVEIYSIDEAFCDLTGV--RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLAN 150 +E S+DEAF D++ + + + +R V ++ T G++ K LAK+ + Sbjct: 146 CLLEKASVDEAFLDVSPLVACSPCGGGLIAQRLRRAVYEQLGFTCSAGVSVNKLLAKVGS 205 Query: 151 HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADT 209 K ++ L + +++ LP+ + G+G ++ L+ +G T A Sbjct: 206 ARNKPDKQ------TLVLPRGVQDMLTDLPLGKLRGLGGKLGAALEGQLGAATAGQAAAL 259 Query: 210 DIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAIC 268 + +++ + +RG+ + + ++ +SF E + +++ + Sbjct: 260 PLEALQRVLGERSGLWVWQVVRGQCSEPVTPKDKP-KSLLSCKSF-EPTSAPAELQRWLL 317 Query: 269 SYAARAA 275 A Sbjct: 318 ILAEELG 324 >UniRef50_Q3SQD1 DNA-directed DNA polymerase n=14 Tax=Bradyrhizobiaceae RepID=Q3SQD1_NITWN Length = 501 Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats. Identities = 59/373 (15%), Positives = 115/373 (30%), Gaps = 21/373 (5%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV 95 + A N A LG+ +G P + + V F ++ A N + + +P V Sbjct: 2 VISALNDAAARLGLTIGLPLANARAICPDIDV--FDADETADARTLNGIADWCDRFTPLV 59 Query: 96 EIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 + D+TG + + L R V IA T A+ Sbjct: 60 ALDPPHGLLLDITGCAHLFGGEAALMNALCSALTRQGFAVSAAIAGTPACARALTRH--- 116 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 + + + ++ LPV + G I++ L G+KT+ D+A I Sbjct: 117 ------VHGRIVAPGEELEAVAPLPVFTL-GTDDEITRGLRRAGLKTIGDVAVRGRHEIA 169 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 F + + G+ + P I + F E I ++ + A Sbjct: 170 ARFGAAFTALLEQTLGQRDAPINPRRPPPDYI-VEKRFAEPIATDSAIAMTLAGLARTLI 228 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 + + + R + + A+ V + +L Sbjct: 229 AAMEKQGKGARHLEAGFFRTDGAVRVITVETGRPVTRGEIVD---RLFRERLDALADPLD 285 Query: 336 AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 G + + S Q +L +A ++++ ++D + A+ G + Sbjct: 286 PGFGFDLVRLSAVRTESVVHEQRDL---DARVQDNDEVAALIDRIAARIGSHRV--VVHL 340 Query: 396 IQQQWQMKRAMLS 408 Q +R LS Sbjct: 341 PQDTHIPERGALS 353 >UniRef50_Q5Q9G7 Polymerase kappa isoform 2 n=34 Tax=Deuterostomia RepID=Q5Q9G7_HUMAN Length = 489 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 63/373 (16%), Positives = 106/373 (28%), Gaps = 79/373 (21%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL----------SNNDGCVIARNA--EAKALG- 48 D++AFYA+ E P+L KP+ V V A AK L Sbjct: 103 IVHIDMDAFYAAVEMRDNPELKDKPIAVGSMSMLSTSNYHARRFGVRAAMPGFIAKRLCP 162 Query: 49 ----VKMGDPWFKQKDLFRRCGVVCFSSNYELY-----------------------ADMS 81 V ++ + + + N+ Sbjct: 163 QLIIVPPNFDKYRAVSKEVKEILADYDPNFMAMSLDEAYLNITKHLEERQNWPEDKRRYF 222 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL------------------------- 116 ++ S++E +P E+ + E ++ + Sbjct: 223 IKMGSSVENDNPGKEVNKLSEHERSISPLLFEESPSDVQPPGDPFQVNFEEQNNPQILQN 282 Query: 117 --------TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN 168 + +EIR + Q+T LT GIA LAK+ + K + L N Sbjct: 283 SVVFGTSAQEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQ----ILPN 338 Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRE 228 + + LP+ V GIG+ K L A+GI T +L + Sbjct: 339 RQAVMDFIKDLPIRKVSGIGKVTEKMLKALGIITCTELYQQRALLSLLFSETSWHYFLHI 398 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G L ++ + R+F E I + A+ L+ E Sbjct: 399 SLGLGSTHL-TRDGERKSMSVERTFSE-INKAEEQYSLCQELCSELAQDLQKERLKVFGY 456 Query: 289 STFIKTSPFALNE 301 F N+ Sbjct: 457 LVFPMKRTGNTNK 469 >UniRef50_C1SJI9 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJI9_9BACT Length = 250 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 43/244 (17%), Positives = 79/244 (32%), Gaps = 14/244 (5%) Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 + K M + + +WGIGR++ + MGI DL + + F + R Sbjct: 9 DEAVKFMDSFELGKIWGIGRKLDARFRNMGIFNTADLRQLGEERLCEMFGLNGSRIYEMA 68 Query: 230 RGEPCLQLEEF--APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 G + E + I S + I I + + + R + Sbjct: 69 CGRYPDGVNEQKKEEPVKSIGHSMTIPHDIRSREEAASYILQLSEMVSARARKNGYSGKT 128 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 + I+ + T + I A D +W + + G+ L Sbjct: 129 LHLTIR------DSEMGTVGKRRTFGFFTSATHHIYEIAMSLFDELWDD-YPIRLLGISL 181 Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 G V N+ DD P + +D +N K G+ + +A ++ K + Sbjct: 182 GSLVPGCVMLSNIMDDFQGWP---DIYDAIDKINDKYGKQVISYASVLKCKRRGAK--TI 236 Query: 408 SPRY 411 SP + Sbjct: 237 SPAW 240 >UniRef50_A8LY61 UMUC domain protein DNA-repair protein n=24 Tax=Actinomycetales RepID=A8LY61_SALAI Length = 528 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 58/410 (14%), Positives = 118/410 (28%), Gaps = 30/410 (7%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 S + PV VL N V+A + +A+A GV+ G + + + VV Sbjct: 16 VSAAELVDGVPATDPVAVLHANR--VVACSEQARAKGVRRGLRRREAQSRCPQLTVVAH- 72 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVR-NCRDLTDFGREIRATVLQR 130 + V++ +EEL V + G + I V Q Sbjct: 73 -DPARDTRAFEPVVAAVEELVAGVAVVRPGVCAIPARGPARHLGGEEAAAERIIEQVAQA 131 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 + VGIA A LA + + ++ PV+ + Sbjct: 132 CAVESQVGIADGAFAAGLAARTGQA-----------VPPGGTPRFLADQPVEALGR--PA 178 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 ++ L +G++T+ D A + F + G L P + + Sbjct: 179 LADLLRRLGVRTLGDFAALPSGDVLARFGADGALAHQLAAGRDHRPLAVRQPPAD-LTVT 237 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 E + + + A R ++L + C + T+ + + + Sbjct: 238 VDQDEPLDRVDAAAFVARALAERLHDRLTAYGLACTRLGIEAVTAHGQELHRTWRHDGLL 297 Query: 311 KLLTPTQDSRDIINAATRSLD---AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 +R ++ + + ++ + G Q L+ + Sbjct: 298 TAAAIADRTRWQLDGWLSGGRSGTESARPTAGIVRLRLVPDGVVASGALQPGLWGEAG-- 355 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 ++ + + G + A G + + L P D Sbjct: 356 EERDRAHRALSRIQGVLGPEAVVTAVLGGGRSPA-DQVRLVP-----WGD 399 >UniRef50_B9Q7A7 Terminal deoxycytidyl transferase rev1, putative n=3 Tax=Toxoplasma gondii RepID=B9Q7A7_TOXGO Length = 2497 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 53/287 (18%), Positives = 95/287 (33%), Gaps = 48/287 (16%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGC---------VIARNAEAKALGVKMG 52 D +AF+ + RP L PV V + V + N A+A GV G Sbjct: 768 ILHVDFDAFFVAVALKKRPHLKNFPVAVAHSRGSGGKAASSTSEVASCNYTARASGVYKG 827 Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + K+ G++ +++ + S + + + +LS R+ S DE + L Sbjct: 828 QWLGEAKERCP--GLITLPYDFDGIEEASEGLFACVLQLSRRILPVSCDETYVQLLLAPR 885 Query: 113 CRD--------------------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA 152 + + D E+R + +RT V +G AKLA Sbjct: 886 NGESNEETEGLADGSESGEAEKAILDACVELRQRIFERTGCWVSIGAGPNLLAAKLAGLQ 945 Query: 153 AKKWQ-----------RQTGGVVDLSNLERQ-RKLMSALPVDDVWGIGRRISKKLDAMG- 199 AK GV + E M +P+ + G+G + +K++ G Sbjct: 946 AKPKASSSSSSSSSSSLSRDGVCVIRPRESFLWAFMDQVPLRKLPGVGSMLGEKVEKAGR 1005 Query: 200 IKTVLDLAD---TDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAP 242 ++ + +R ++ G L F+P Sbjct: 1006 LRLCGQVMKEGIRSLRVLQNLLGRKRGAMIWWMAHGCDPRPLPPFSP 1052 >UniRef50_C4ZE13 DNA-directed DNA polymerase n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4ZE13_EUBR3 Length = 341 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 65/317 (20%), Positives = 113/317 (35%), Gaps = 26/317 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFK 57 + D+N YAS E + P+L GKP+ V + G V+ + AK GVK G ++ Sbjct: 11 VILHSDINCCYASIEHLHHPELAGKPLAVGGDPEARHGIVLTADYIAKKYGVKTGMALWQ 70 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-RDL 116 K++ + S +LY S E + R E Y IDE + D+TG + D Sbjct: 71 AKEVCPD--ITFVSPRMDLYLRFSRMAHEIYAEYTDRQEPYGIDECWLDVTGSSSLKGDG 128 Query: 117 TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +EI + +TV VG++ K AKL + + G + L ++ Sbjct: 129 LLIAQEISRRMKSELGITVSVGVSFNKIFAKLGSDY------KNGCYLILIQNRCMKQKF 182 Query: 177 SALP-VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 LP + + + I K + ++ D D E V+ + + Sbjct: 183 LDLPEPYKEYDLKKAILKNMKKFLLEFGRDFIFIDE-----------EYHVQVGNNDYYV 231 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 L + Q ++ + P + Y ++ H+ K + Sbjct: 232 DLLFYHRELQCLVAIDLKIDDF--KPEYMGKMDFYLEALDRDIKKPHENPSVGMILCKNA 289 Query: 296 PFALNEPYYGNSASVKL 312 + E S S + Sbjct: 290 DTDVVEYSLSRSLSQTM 306 >UniRef50_A7HW56 Nucleotidyltransferase/DNA polymerase n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HW56_PARL1 Length = 548 Score = 151 bits (382), Expect = 3e-35, Method: Composition-based stats. Identities = 64/392 (16%), Positives = 118/392 (30%), Gaps = 31/392 (7%) Query: 23 WGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSN 82 + + + V ARN A A G++ G L + S++ E Sbjct: 51 KPRALAMPGVGGLRVTARNELADAAGIRPGQMVSDATALCPGLEL--HSADREGDRKGLV 108 Query: 83 RVMSTLEELSPRVEIYS------IDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVG 136 R+ +P + D D+TG + E LQ LT Sbjct: 109 RLAGWCGRYTPWTALDPQGIGDEPDGILLDITGCDHLFGGEAKLLEELRRRLQGFGLTTR 168 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 IA T+ A + + + + +LPV + + I L Sbjct: 169 AAIASTRGAAWALAR-------FGNQPALVLPVNGEVDALRSLPVAALR-LNEAIVNGLM 220 Query: 197 AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 +G+K + DL + F + R + E G + P S +F E Sbjct: 221 RLGLKKIGDLYGKPRAPVTARFGPEVSRRLDEALGFEPEPISPELPP-VFYRASITFSEG 279 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 +T + A+ AA E L EHQ R + + + + Sbjct: 280 LTRNAHIEDAVKRIAADLCEVLEREHQGARRLELQLFRVDGEVTR------LQAGTGIAS 333 Query: 317 QDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 D+ + L + + G + + AQ ++++ ++ L Sbjct: 334 HDAFHLSRLFREKLAQLGDDFDTGFGVEALTLSCLAVDELKPAQETFENESS---RAQAL 390 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 +D L+ + G + + +RA Sbjct: 391 EQFIDRLSNRFGADRVLR--LEPRASHIPERA 420 >UniRef50_D1C5S3 DNA-directed DNA polymerase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C5S3_SPHTD Length = 397 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 72/407 (17%), Positives = 129/407 (31%), Gaps = 23/407 (5%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQK 59 A + F E + RP+L G+P+V+ V EA A G++ G + Sbjct: 5 IACVSIPHFALRVEVLERPELDGRPLVLATPPGGRNLVDDCTLEAIAAGIRPGLSLREVT 64 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L V N A + R+++ LE LSP VE + + DL G+ + Sbjct: 65 ALCPD--AVVVQPNPVRDAAVFERIVTRLEGLSPLVEPAAPGCCYVDLRGLDRHYGSPER 122 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + L GIA K A++A A G + E ++ Sbjct: 123 AAARLLQAVPPL-LRPRAGIAPGKFAARVAAGQAAP------GGWHIVAPEDVATFLADK 175 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+D + + + ++L+ +G++T+ DLA+ ++ F R +G + Sbjct: 176 PIDWLP-LPPDMLRRLERLGLRTMRDLAELPAHAVQARFGPEGRRAWELAQGLDSDPVRP 234 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + ++ S T ++ A+ RA + + R Sbjct: 235 RERAE-SVVVELSLPAPATSRDALMIALRQLVTRAFARPALHGRGVRQARLRAHLEGGR- 292 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 L P R I A + + L + Q Sbjct: 293 -----SWEHVATLREPAGRERLI--DALGHRLQAVTLPAPLEALTLELTGLTAVAAHQET 345 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 LF + QL+ + L + G +Y + +R Sbjct: 346 LFG--TRPRRARQLIEAIRQLKQRYGTSPIYRVVEVEPWSRIPERRR 390 >UniRef50_A5VH01 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=4 Tax=Alphaproteobacteria RepID=A5VH01_SPHWW Length = 519 Score = 151 bits (381), Expect = 5e-35, Method: Composition-based stats. Identities = 70/413 (16%), Positives = 129/413 (31%), Gaps = 29/413 (7%) Query: 16 TVFRPDLWGKPV--VVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 P +P+ + + V A +A A+ALG+ G K + VV + Sbjct: 28 RRDTPTP-TRPLVTAIPDHGRRIVAAVDAGARALGIAAGMTITKARSFAPELDVV--DAQ 84 Query: 74 YELYADMSNRVMSTL-EELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTH 132 E + R+ + SP V + D + D+TG + + Sbjct: 85 PEADVEGLRRLALWAGQRYSPIVAPDAPDGLWLDITGCAALFSTEAALLKDLHRRVAAFG 144 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 ++V + +A T A G RK ++ LP+ + + + Sbjct: 145 VSVQIAVADTAGCAHAVARH------VPAGRPVTIEPSDHRKAIALLPIAALR-LEADVV 197 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 + L +G + V L + K F L R + + G +E P R Sbjct: 198 EGLRKLGFERVEQLIGAPRGPLAKRFGRSLHRRLDQALGAVAEPIEPIFPE-HLPRARRG 256 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 F E I + Q I A ++L + R + + G Sbjct: 257 FMEPIATAEAFGQVIGDLVADIVDQLGRVGKGARRLDCYFHRVDGHTQVIRVGT------ 310 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 TP++D + ++ + + G + +++ Q + Sbjct: 311 ATPSRDQAHLSKLLCAKIETV-EPGLGIESMTLLVSLMEPVAARQGESLERLGKPGP--D 367 Query: 373 LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR----S-SDLLR 420 L ++DTL+ + G L+ + + A SP T DL R Sbjct: 368 LAALVDTLSNRFGSRCLHRMAPHPSE-MPERSATSSPALDTARGAGWDDDLPR 419 >UniRef50_Q9Y253 DNA polymerase eta n=14 Tax=Amniota RepID=POLH_HUMAN Length = 713 Score = 150 bits (379), Expect = 8e-35, Method: Composition-based stats. Identities = 67/389 (17%), Positives = 116/389 (29%), Gaps = 80/389 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ F+ E P L KP V+ G +IA + EA+A GV Sbjct: 8 VVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGIIAVSYEARAFGVTRSMWADD 67 Query: 58 QKDLFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K L + +N Y + S VM + +E SIDEA+ DLT Sbjct: 68 AKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRF-AVIERASIDEAYVDLTSAVQ 126 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK-----------------K 155 R G+ I A +L T++ T K Sbjct: 127 ERLQKLQGQPISADLLPSTYIEGLPQGPTTAEETVQKEGMRKQGLFQWLDSLQIDNLTSP 186 Query: 156 WQRQTGGVVDL------SNLE---------RQRKLMSALPVDDVWGIGRRISKKLDAMG- 199 + T G V + E K+++ L G+ + + L + G Sbjct: 187 DLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLAC----GLNKPNRQTLVSHGS 242 Query: 200 ------------IKTVL-----------------DLADTDIRFIRKHFN-VVLERTVREL 229 I+++ +L ++ HF Sbjct: 243 VPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMC 302 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 RG ++ + I CS++F + ++ + A E+L + Sbjct: 303 RGIEHDPVKPRQLP-KTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRNDNDR 361 Query: 288 ISTFIKTS-PFALNEPYYGNSASVKLLTP 315 ++T + S ++ L Sbjct: 362 VATQLVVSIRVQGDKRLSSLRRCCALTRY 390 >UniRef50_A4I3M2 DNA polymerase kappa, putative n=2 Tax=Leishmania RepID=A4I3M2_LEIIN Length = 409 Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats. Identities = 57/397 (14%), Positives = 103/397 (25%), Gaps = 73/397 (18%) Query: 10 FYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 FYA+ E P L +P V S D + + G P F K L + Sbjct: 2 FYAAVEERLDPSLRERPFAVGSYATADHNQLHCS----------GTPGFMAKKLCPS--L 49 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR---DLTDFGREIR 124 +++ + + V + P +DE D+T D E R Sbjct: 50 WTRPPHFDRHRREAANVRAIGALYDPHYVAVGLDELTMDVTDYLRTHQDCSAEDVCAEFR 109 Query: 125 ATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 V T T GIA T AK+A++ K + ++ L E + +PV DV Sbjct: 110 RRVEAATQPTCSGGIAHTPAFAKVASNVNKPNGQH---ILTLRTREEVLAHVRDMPVRDV 166 Query: 185 WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC---------- 234 GIG ++L A+G+ T D + G Sbjct: 167 PGIGFATEQRLHALGVVTCKDFLTHKAELCYLFREKTFAFYLSVGLGLVRANVNRSNAER 226 Query: 235 -------------------------------------LQLEEFAPTKQEIICSRSFGERI 257 + ++ + + Sbjct: 227 EAVTAPPSAAAAMKPSSAAHLKSRLSRALASPSPSALRAVVPDHRAQKSTRKCTTLACGV 286 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + + A + L + + + + + + S + L T Sbjct: 287 PICEAFWYHLRQLTQGAHDVLMKQGAGTKHVCF------YTTSRAFVSRSHAAMLSEATN 340 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 + + + ++ GV Sbjct: 341 SFAKLYAGLEKVAEPFAARHREFRLIGVKFSKLQPLP 377 >UniRef50_D0CTA7 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=12 Tax=Rhodobacterales RepID=D0CTA7_9RHOB Length = 550 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 62/433 (14%), Positives = 125/433 (28%), Gaps = 53/433 (12%) Query: 22 LWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYAD 79 L P+ V+ +N + + N A+A G+++G P + +V N A Sbjct: 26 LHSGPLAVVAEQSNMQVITSLNTAAQAAGLRVGQPVRDAHAMC--AALVTRPRNAPAEAA 83 Query: 80 MSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGI 139 + + SP V + D DL+G + + ++ T L+V +GI Sbjct: 84 FLTALRRWAGKFSPWVAEEASDGLIVDLSGCAHLFGGEEALLDVIETDCADMGLSVQMGI 143 Query: 140 AQTKTLAKLANHAA-----------------------------------KKWQRQTGGVV 164 A T A A GG Sbjct: 144 ADTLGAAWALARYAGQEATSDRNGDAISQEARATRARAGKRRHWTKGGAAPQVVAVGGGA 203 Query: 165 DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER 224 ++ + ++ LP+ + + + +L+ +G++ + DL + + F L Sbjct: 204 RIAPPGQAYGALAPLPIAALR-LDDQTVAQLNRLGLRRIGDLLGQPRASLARRFGRGLVL 262 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 + + G + P + I + AI +L + + Sbjct: 263 RLDQAMGSAPEPVSPARPPHH-FAVRMTLPNPIGLAEDVMAAIDRMLPTLCARLEEKARG 321 Query: 285 CRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAG 344 R + + A G L P+ D I +D I AG+ Sbjct: 322 ARTLRLEAHRTDQAAEIIEIG------LARPSHDKHRIRPLLEMKIDQI-DAGYGIDMLR 374 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSE-----QLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + L + + + L ++ L A+ G + Sbjct: 375 LAAVQTEPVHARTLTGHAEASRAVRNRLEGNTALDDLIGKLGARVGLDAITRQHPAASHI 434 Query: 400 WQMKRAMLSPRYT 412 + L+ ++ Sbjct: 435 PEKTAQTLAAAWS 447 >UniRef50_A0NRW5 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRW5_9RHOB Length = 481 Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 53/388 (13%), Positives = 116/388 (29%), Gaps = 27/388 (6%) Query: 13 SCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 + E R P + N + A++ G+ G + G++ Sbjct: 7 AAERSLRARPVDAPFALSLFDRNSERLYDLCPRAESFGLNRGMTLVHARSFCP--GLLTR 64 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 ++ + P V + + F D+TG + + + L R Sbjct: 65 PADPAADQRFLRMLARWATRYCPWVGLDGRNGLFLDITGSAHLLGGEEPLLDDIRARLAR 124 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 LT +G+A T A + A ++ + LP+ + + + Sbjct: 125 AGLTARLGLADTPGTAWALSRFA----------EGIAETGETLARIGPLPLSALR-LSDQ 173 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 L+ +GI TV L + + + + + R + + G Q+ + Sbjct: 174 TCTSLERLGIATVSQLYNLPRATVARRYEPDVLRRLDQALGALPEQISPLG-EEPGFAVR 232 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 + + I + A A ++L + + R + + + + Sbjct: 233 MTLPDPIGLLDDVMAAARRLTAHLCQRLDTAQKGARSLKLTFRRVD------QENQAVEL 286 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 KL P +D I+ A + AG+ + + G+ QL+ Sbjct: 287 KLARPMRDPERIL-ALFERGVSAVDAGYGIDMIRLEATEVEPLGMRQLD----RTEGLEK 341 Query: 371 EQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + L ++ L + G + Sbjct: 342 DGLDDLITQLGNRVGLDNILRFQPVDSH 369 >UniRef50_B0NK47 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NK47_EUBSP Length = 290 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 44/247 (17%), Positives = 88/247 (35%), Gaps = 7/247 (2%) Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVL 222 + L +R L S P+ D W +G I+++L++ GI T+ D+A D + + F + Sbjct: 39 IGILEEESYKRTLWSHRPLTDFWRVGSGIARRLESAGIYTMEDIAKADEDMLYRMFGIDA 98 Query: 223 ERTVRELRGEPCL---QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 E + G ++ + P + I S+ G D+ R A KL Sbjct: 99 ELLIDHAWGRETTTIADIKAYRPKENSISSSQVLGCD-YDFEGGRLIAKEMADLLCLKLV 157 Query: 280 SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 + IS ++ S + +G ++ + T ++ I+ + I Sbjct: 158 EKGLVTDPISLYVGYSRRLQKKSAHG---TITMPVTTSSAKKIMGYTQELFEQIVDRNAP 214 Query: 340 YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + + + Q +LF D A ++ M + K G+ + + Sbjct: 215 IHRVTLAFNRVVDEMYQQYDLFTDPAEIEREHKIQKTMLEIKEKFGKNAILKGMNLEKGA 274 Query: 400 WQMKRAM 406 +R Sbjct: 275 TTKERNR 281 Score = 41.7 bits (96), Expect = 0.052, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 1/34 (2%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNND 34 + D+ +FYAS E R D +VV + Sbjct: 7 YICIDLKSFYASVECRERGLDPLMTNLVVADHIG 40 >UniRef50_Q0G3S1 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G3S1_9RHIZ Length = 494 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 66/383 (17%), Positives = 125/383 (32%), Gaps = 24/383 (6%) Query: 26 PVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P+ + N N V A A+ G+ +G + + F G+ ++ + Sbjct: 3 PIALYQNAANANRVTAVCEMAERQGLAVGTGLSEARARFP--GLETLMADMAADRRLLAA 60 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-FGREIRATVLQRTHLTVGVGIAQT 142 + + +P V + D++G + ++ + + L Sbjct: 61 IADWCDRYTPLVALDPPFGLILDISGCAHLFGGERGLMDDLLMRLFHQGFLAQAAIAGSA 120 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 L AK +GG +R ++ LP+ + + S L +G+KT Sbjct: 121 GAAIALVGVPAKPAIVASGG---------ERAAVAPLPIKVLR-LDPETSGLLSRLGLKT 170 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 V L D + + F L RT+ E G + P Q I R E I Sbjct: 171 VAALLDQPRAGLARRFGKSLVRTLDEATGLARRPISPRRPVPQLI-AERRLFEPIALEED 229 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + + + + A+R L R + + +N G + V+ T + Sbjct: 230 VARILFALASRLKGDLEERGLGARTLELSLFRVDGVVNRASVGAARPVREPTAV---ARL 286 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 + L + AG Y + + + Q +L + L +D + A Sbjct: 287 FREKLKGLGEEFDAGFGYDLVKLAVYETDRLETIQTDLSGEVETNAAFTHL---VDRIGA 343 Query: 383 KEGRGTLYFAGQGIQQQWQMKRA 405 + G T+ + WQ +RA Sbjct: 344 RLGPKTVL--APCRRDSWQPERA 364 >UniRef50_B9KR94 DNA repair enzyme n=4 Tax=Rhodobacter sphaeroides RepID=B9KR94_RHOSK Length = 534 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 61/412 (14%), Positives = 112/412 (27%), Gaps = 43/412 (10%) Query: 17 VFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNY 74 R D P V+ + G +++ +AEA+ALG+ G + ++ S + Sbjct: 21 RRRKDTLPPPFAVVGDRQGAQVLVSVSAEAEALGLGPGQGLRDATAICPH--LMTASEDP 78 Query: 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLT 134 A + + SP V DLTG + + + LT Sbjct: 79 ASEAAFLAALRRWAGKFSPWVAEEPPAGLMIDLTGCAHLFGGEEKVLGVVEADCAGLGLT 138 Query: 135 VGVGIAQTKTLAKLANHAAKK----------------------------WQRQTGGVVDL 166 V +A T A A + G + + Sbjct: 139 VRAAVADTPGAAWALARHAGRALQGNLNGDAIEQEAHATRSRASRRRTFAPPSGGPLGLI 198 Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTV 226 S R + LPV + + + L +G++ V DL D + + F + R + Sbjct: 199 SAPGALRAALEPLPVAALR-LSEGTVQSLARLGLRRVGDLLDLPRASLARRFGQEVTRRI 257 Query: 227 RELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCR 286 + G + + + I + + ++L+ + + R Sbjct: 258 DQALGLEPEPVSPAGAPLH-FAVRLTLPDPIGLREDVEAGLDRLLGPLCDRLKEKGRGAR 316 Query: 287 FISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 + S + G L T I AG + Sbjct: 317 RVRLQAFRSDGQVPAVEVG------LAQTTCAPERIRP-LLALKIDQIDAGFGIDMLRLS 369 Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + VA +E L V+ L A+ G + Sbjct: 370 AVETELLTVASGK--GRGPAGRPAEVLADVVGRLGARLGAEGVTRLHPAESH 419 >UniRef50_A3VTP3 ImpB/MucB/SamB family protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTP3_9PROT Length = 453 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 89/425 (20%), Positives = 158/425 (37%), Gaps = 31/425 (7%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQK 59 + D NAF+A+ P L G+PVV+ + IA + EA+ G++ G + + Sbjct: 13 YLYIDFNAFFAAAAQHDEPALAGRPVVITPHRSEYSSAIAVSYEARPFGIRRGTKIREAR 72 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L V + ++ Y + ++ +E + P ++YSIDEA L + D Sbjct: 73 HLCP--AVAVRPARHDRYIRLHKELIGAIETVLPLGKVYSIDEATFRLDRTQASPDRARI 130 Query: 120 -GREIRATVLQRTH--LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 +++ + R +GIAQT LAKLA K + + +E + Sbjct: 131 QAEAVKSVIADRIGPSFRNSIGIAQTPLLAKLAAGLQKPDG------LTVLMMEDLPGRL 184 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCL 235 S+L + D+ GIG ++++L+ G+ + L + R + +V ER G Sbjct: 185 SSLALSDLPGIGPNMAQRLERSGVTNIDALWALAPKQARAIWRSVQGERFWYAFHGY--- 241 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 ++ E A K + SR + R + +AA +LR+ + ++ +K Sbjct: 242 EVPEPATKKGMVGHSRVLTSGLRTAKGARPVARALLLKAAARLRAMDRLATRLTLTLKDE 301 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF---S 352 S T + + A + + + G R + L Sbjct: 302 QGRKIAFEERFDLSTDSTTFLRALDRLWERALEQVPEL-RRGARLGSVSIFLHGLVGEGD 360 Query: 353 QGVAQLNLFDDN------APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ----WQM 402 Q +LFD P +L +D LNA E +A Q + Sbjct: 361 AEARQGSLFDGPIEADPEEADPKRARLWAAIDRLNADEEGRLARWALPDRQPDRPGQTRP 420 Query: 403 KRAML 407 + ML Sbjct: 421 RHVML 425 >UniRef50_D1WSU8 DNA-directed DNA polymerase n=3 Tax=Streptomyces RepID=D1WSU8_9ACTO Length = 335 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 59/346 (17%), Positives = 107/346 (30%), Gaps = 20/346 (5%) Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDL 116 + + + R + E Y L +L+P V+ D A D+TG D Sbjct: 7 RARSVLRVQLHGLGPAGQERYEQALAL----LRDLTPLVQALPPDAADLDVTGALRFFDR 62 Query: 117 TDFGREIRATVLQRTHL--TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 G A + HL +G + LA +A A+ Q + Sbjct: 63 DTGGLAAMAALRLAAHLGLRATIGAGPNRMLAAMAADASAPGQVTVVAP----DPGAVAA 118 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEP 233 + P+ + G+G ++ L G+ V DL D + +++ + RG Sbjct: 119 FLRPKPLGALHGVGPATARTLGEYGLHRVGDLLDVPLLTLQRILGRATALTLSQRARGLD 178 Query: 234 CLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 + A + S FG D + R+A+ R +LR+ Q ++ I Sbjct: 179 PRPVTSDAAPR-STGFSHEFGHDELDPAAHRRALLDLCERLGLRLRTTGQVAVRLALNIS 237 Query: 294 TSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 + A + S L T + + AA R + V ++ Sbjct: 238 YADGATTQ------RSRTLEEYTAHTPALSAAAYDLYSRFGLQRARVRTITVRAELTDAR 291 Query: 354 GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 Q L D ++ D + G + ++ Sbjct: 292 YAVQQLLLDPADG--KRRRIEQAADRARTRFGDQAIRPGTLARPRR 335 >UniRef50_UPI0001B4E7CA hypothetical protein SvirD4_08371 n=2 Tax=Streptomyces RepID=UPI0001B4E7CA Length = 482 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 49/282 (17%), Positives = 98/282 (34%), Gaps = 14/282 (4%) Query: 83 RVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIA 140 ++ LEE +P V+ D A DL G D + IR L + +G Sbjct: 20 HLLGMLEEFTPVVQALPPDGALADLRGAERYFRRDAVELASVIRVRSLALHGVDCVIGAG 79 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 LA++A A +T + + ++ PV + G+G ++ L G+ Sbjct: 80 PGPMLARMALRDAAPGVTRTVP----DEPDAIAEFLADQPVAALPGVGTATARTLGDYGL 135 Query: 201 KTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 T+ +A + +++ + G ++ + + R FG + Sbjct: 136 DTLGRVAAAPLSTLQRLIGAKPGRELREKANGVDRGRVVP-NAVARSLATERPFGRDELN 194 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP------FALNEPYYGNSASVKLL 313 R+A+ S A +LR+ + CR ++ ++ + + + S L Sbjct: 195 PERHRRALLSAAEEIGARLRALEKVCRTLTLTMRYADLPHSRTGSSGGTPIATTRSRTLT 254 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 PT S + AA +A+ R + + + Sbjct: 255 EPTAHSPALTRAAYGMYEALGLQRARVRAIALRAEGLDPKKP 296 >UniRef50_B2ABI5 Predicted CDS Pa_1_20790 n=4 Tax=Sordariomycetes RepID=B2ABI5_PODAN Length = 696 Score = 147 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 67/470 (14%), Positives = 125/470 (26%), Gaps = 110/470 (23%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++ FYA E V KP+ V +IA N A+A + + + Sbjct: 45 VVAHLDLDCFYAQVEMVRLGIPEDKPLAVQQWERQGLIAVNYPARAFKIGRHCTVTEARR 104 Query: 61 LFRRC-----------------------GVVCFSSNYELYADMSNRVMSTLEELSP---- 93 L + + + Y S R+M ++E P Sbjct: 105 LCPELIAQHVATWREGDDKWAYREDAAEHIATDKVSLDPYRLESRRIMRVIKEHLPGGGL 164 Query: 94 -RVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQT--KTLAKLAN 150 +VE SIDE F DLT + + + + G A Sbjct: 165 QKVEKASIDEVFLDLTAHVH--------QVMLERYGEELGGPPPYGDVSEELPMPVVTAL 216 Query: 151 HAAKKW------QRQTGGVVDLSNLERQRKLMSALPVDDVWGI-----------GRRISK 193 + G D + + L+++ V +V G+ G +K Sbjct: 217 DWKADALVDLGEGDRQEGEFDDPDWDDVALLVASEIVRNVRGVIREKLGYSCSAGVSRNK 276 Query: 194 KLDAMG----------------------------IKTVL-----------------DLAD 208 L +G I+ + DL Sbjct: 277 LLSKLGSAHKKPDQQTVIRNRAVGHFLSGFKFTKIRNLGGKLGEQVADAFKTEAVSDLLT 336 Query: 209 TDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAI 267 I +++ LRG ++ + ++ ++SF IT + + Sbjct: 337 VPIEQLKQKLGDENGVWIYETLRGIDTSEVNS-GTQIKSMLSAKSFRPDITTVEQATKWL 395 Query: 268 CSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY--YGNSASVKLLTPTQDSRDIINA 325 +AA +L E + + L+ + S S + + + Sbjct: 396 RIFAADIFARLVEEGV----LEHKRRPKTINLHHRHGNQTRSRSGPIPARLLNEESLFEL 451 Query: 326 ATRSLDAIWQAG--HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 A I G + + F + + + L Sbjct: 452 AKNLFHQITLEGNAWPCSNLSLSVAGFEEGVSGNMGIDSFLVKGDEARAL 501 >UniRef50_B6BEE1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=17 Tax=Rhodobacterales RepID=B6BEE1_9RHOB Length = 492 Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats. Identities = 65/393 (16%), Positives = 120/393 (30%), Gaps = 29/393 (7%) Query: 15 ETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 E V R P + N + NA A G+ G + + + ++ Sbjct: 20 ERVLRRCPVDGPFALTLKQQNANRIYCLNAAASEQGLHPGMAYADARAFCPD--LQSGAA 77 Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTH 132 E + P V D D+TG + + L R Sbjct: 78 EPEQDQLFLRLLCRWAARYCPWVGAEGTDGLVLDITGAAHLFGGEEAMLADMRMRLMRAG 137 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 L+V G+A T+ A H ++ + LP+ + I +IS Sbjct: 138 LSVQAGLADTRGAAWALAHYG----------EGIAPTGETLPSLKHLPIAALR-IDEQIS 186 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 L +G++++ DLA + + F L R + + G + AP + Sbjct: 187 VTLQRLGVRSIGDLAGAARAPLNRRFGPALLRRLDQALGTEPEAISPQAPPPH-YAVRMT 245 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 E I + +KL+S + R + ++ ++L Sbjct: 246 LPEPIGLLSDVMTGAERLLLPLCDKLKSHEKGARELHLTLRRVD------QGHQQVELRL 299 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 P +D + I+ R L+ I AG + S V Q + G ++ Sbjct: 300 ARPLRDPQRILPLFERGLNEI-DAGFGIDMLRLEATQVESLPVQQ----SSHVSDGGKDK 354 Query: 373 LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 L ++ L + G + +R+ Sbjct: 355 LDDLISRLGTRIGLENIQR--FLPADSHIPERS 385 >UniRef50_B5H9Q9 Putative uncharacterized protein n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H9Q9_STRPR Length = 330 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 59/323 (18%), Positives = 109/323 (33%), Gaps = 17/323 (5%) Query: 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTH 132 +Y +++ E++SP V+ D A D+ G D +R L Sbjct: 20 PMYEAALPALLAVAEDISPVVQALPPDAALVDVRGAERYFGRDAAQLASLLRVRALAHCG 79 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 + +G +A++A A G + E + PV + G+G + Sbjct: 80 VDCVIGAGPVPMIARMAAREAVP------GTTLVVTEEETAAFLDGRPVAALDGVGPVTA 133 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSR 251 + L A G+ + +A + I++ RG + + + R Sbjct: 134 RTLCAYGLDSAGRVAGAPLAVIQRILGARAGREVWERARGIDRTAVVP-NALSRSMAAER 192 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 SFG D R+A+ S A ++R E Q CR ++ ++ + + Sbjct: 193 SFGLDELDQIEHRRALLSLAEELGSRMRGERQVCRSLTLTVRYADRSTTTRTRTL----- 247 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 PT S + + A + + R + + D + A L D A + Sbjct: 248 -REPTAHSAALADTAYALHEVLGLQRARVRGLSLRAEDLTAAERAARQLTFDPAD-ERAR 305 Query: 372 QLMTVMDTLNAKEGRGTLYFAGQ 394 ++ V D AK G G + Sbjct: 306 RIEEVADRARAKFGPGAVVPGSL 328 >UniRef50_O42917 N-acetyltransferase eso1 n=1 Tax=Schizosaccharomyces pombe RepID=ESO1_SCHPO Length = 872 Score = 147 bits (371), Expect = 7e-34, Method: Composition-based stats. Identities = 54/436 (12%), Positives = 125/436 (28%), Gaps = 98/436 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D +AFYA E+V P+ V +IA N A+A + + + K Sbjct: 28 VVAHIDQDAFYAQVESVRLGLDHSVPLAV--QQWQGLIAVNYAARAANISRHETVTEAKK 85 Query: 61 LFRRCGVVC---------------------FSSNYELYADMSNRVMSTLEELSPRVEIYS 99 + + + Y S ++++ +++ +P V+ S Sbjct: 86 KCPELCTAHVKTWKAGESEAKYHENPNPNYYKTCLDPYRHESVKILNIIKKHAPVVKKAS 145 Query: 100 IDEAFCDLTGVRNCRDLTD----------------------------------------- 118 IDE F +LT L + Sbjct: 146 IDECFIELTSDVKRIVLEEYPYLKIPSEDSNVALPQAPVLLWPAEFGMVIEEEVVDRTKE 205 Query: 119 ------------FGREIRATVLQ----RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 + +I + + T G++ L+KL + K ++ Sbjct: 206 DYERDWDDVFLFYAAKIVKEIRDDIYLQLKYTCSAGVSFNPMLSKLVSSRNKPNKQ---- 261 Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRI-SKKLDAMGIKTVLDLADTDIRFIRKHFN-V 220 + + + +L + D+ +G + + ++ +G ++ D+ + + F+ Sbjct: 262 --TILTKNAIQDYLVSLKITDIRMLGGKFGEEIINLLGTDSIKDVWNMSMDFLIDKLGQT 319 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK-LR 279 G ++ K + +++ +A+ + L Sbjct: 320 NGPLVWNLCHGIDNTEITTQVQIKSMLSAKNFSQQKVKSEEDAINWFQVFASDLRSRFLE 379 Query: 280 SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ-DSRDIINAATRSLDAIWQA-- 336 E S F S S ++ ++ I+ A ++ L + Q Sbjct: 380 LEGMRRPKTICLTVVSRFL------RKSRSSQIPMNVDISTQFIVEATSKLLRQLQQEFD 433 Query: 337 GHRYQKAGVMLGDFFS 352 + + + Sbjct: 434 VYPISNLSISFQNIIE 449 >UniRef50_A4S4R4 Predicted protein n=2 Tax=Ostreococcus RepID=A4S4R4_OSTLU Length = 534 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 72/472 (15%), Positives = 140/472 (29%), Gaps = 112/472 (23%) Query: 1 MFALCDVNAFYASCETVF------------RPDLWGKPVVVL------------------ 30 + A D++AFY E R P+VV+ Sbjct: 11 VVAHLDLDAFYCQVERRDLRAKTAAGRRDGRASAEDVPLVVVQYNPFERGGVRALAPDDD 70 Query: 31 -----SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS-----SNYELYADM 80 + +IA + EA+A GVK + + L C VV ++ LY + Sbjct: 71 RELRDGFENHSLIAVSYEARARGVKRNMRGREARALAPACAVVQVPTRRSKADLTLYREA 130 Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN---------------------------- 112 V + L +E SIDEA+ DLT Sbjct: 131 GREVAAVLAR-GGTIERASIDEAYLDLTESAKKVLEETAWATILEKARTSHAAGASAVSG 189 Query: 113 ----------------------CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLAN 150 +R + T+ GIA K LAKL + Sbjct: 190 KGYASVAWWNRDESEWREEEKLLAAGAYICFNLRKACVDELGYTLSAGIALNKMLAKLTS 249 Query: 151 HAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADT 209 K + + + L+ LP+D + G+G + ++L + +KT+ +LA T Sbjct: 250 GMNKPASQ------TVLCPDHTSTLLDELPIDRIRGLGAKFGRELADGLNVKTIGELART 303 Query: 210 DIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE--RITDYPSMRQA 266 +R + + + + G ++ + I ++F I S + Sbjct: 304 PLRKLEEVCGEEKAQWVRKVSLGLDDDPVKAREMP-KSIGTGKTFRGALAIRSIASAKHW 362 Query: 267 ICSYAARAAEKLRSE----HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + A ++ ++ ++ + ++ + + S L + ++ Sbjct: 363 LAELTAELNDRCEADEEEWNRVPKLLTLGLSSPD-ERETSSGHCSRRCPLRPG---ADEM 418 Query: 323 INAATRSLDAIW--QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 A L + V +F S ++ + + + Sbjct: 419 AQDALTLLSKWASGRERWSITGMSVSASNFVSLEKDSGDVVEMFKNATKAAK 470 >UniRef50_B9JES9 Nucleotidyltransferase protein n=14 Tax=Rhizobiales RepID=B9JES9_AGRRK Length = 475 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 62/375 (16%), Positives = 116/375 (30%), Gaps = 27/375 (7%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV 95 + A N +A+ +G+K+G + K + V+ + + + + + +P V Sbjct: 2 RLTALNEKAEIIGLKLGLGVAEAKAICPALDVI--EEDPAADRKLLEAIANWCDRYTPLV 59 Query: 96 EIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 I D F D+TG + + E + L V I+ L+ Sbjct: 60 AIDGKDGLFLDITGCAHLFGGEEALLEDILIRISGLGLDVRGAISSAPGLSWAVARFD-- 117 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 + + + ++ LPV + +G L +G+K V DL + Sbjct: 118 -------DSRVVPPDAMEEALAPLPVASLR-LGEETVAALQKLGLKQVGDLLVAPRAPLT 169 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 + F L + + G + P Q + R E + + Q A Sbjct: 170 RRFGAQLLLRLDQAIGLTEEPISPRRPVAQ-LSAERRLAEPVQAEADILQLARELAEALK 228 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 L + R + A+ G S P ++ R I T AI Sbjct: 229 PGLEARGVGGRLFELLLFRVDGAVFRIAAGAS------QPLREPRRIAGLFTERFTAIHD 282 Query: 336 A---GHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 G+ ++ + + Q + L D + A+ G L Sbjct: 283 DLDVGYGFEIVRLNVLQHAPFDAMQGDF---VEEDRQGTSLAAFADRVAARLGPDCLQ-- 337 Query: 393 GQGIQQQWQMKRAML 407 G ++Q +RA Sbjct: 338 GFELRQSHIPERAAR 352 >UniRef50_A9H958 Putative uncharacterized protein n=3 Tax=Alphaproteobacteria RepID=A9H958_GLUDA Length = 494 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 60/401 (14%), Positives = 117/401 (29%), Gaps = 23/401 (5%) Query: 11 YASCETVFRPD--LWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCG 66 + E + R +P+V + A +A A+A GV G P + + L G Sbjct: 11 FLPVERLRRQHGVPPDQPLVTRSHDGRRQVIAAADAAARARGVTPGQPLAQAQALVP--G 68 Query: 67 VVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRAT 126 ++ + E A ++ ++P D + D TG + Sbjct: 69 LLVMPAAPEQDAAALAGLVRWCLWMAPLTAPDGADGIWIDATGCAHLHGGESAMLARLLD 128 Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 L R L+ IA T A + + + + LPV+ + Sbjct: 129 GLGRRGLSGRAAIADTPGAAHALAR-------HGRARLAVVPPGGHQAALDPLPVEALR- 180 Query: 187 IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQE 246 I R + L +G+ + L + + F L + + G+ + Sbjct: 181 IAPRTADMLHRLGLGRIGALRAAPRAPLARRFGPRLLARLDQASGQVAEPIRPVLAP-DA 239 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 + R F E ++ S R I A LR R + + G Sbjct: 240 MQARRGFVEPLSTPESFRVVIDVLLADLCATLRGRGMGARRLDLICERVDGTACAVRVGT 299 Query: 307 SASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 + D + + + G + +++ AQ ++ Sbjct: 300 AR------AVHDPAHLGRLLVERIGDV-DPGFGVEAMHLLVSAAERMMPAQRGT-GESGD 351 Query: 367 RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 E L + D L + G G ++ + + + Sbjct: 352 AEREEALSALADRLANRLGPGRVFRLDAVATHIPERGQRRM 392 >UniRef50_Q6DCL9 Polh-prov protein n=4 Tax=Tetrapoda RepID=Q6DCL9_XENLA Length = 684 Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 72/434 (16%), Positives = 131/434 (30%), Gaps = 92/434 (21%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPV--------------VVLSNNDGCVIARN---AE 43 + AL D++ FY E P L KPV V + RN + Sbjct: 8 VVALVDMDCFYVQVEQRMNPALKNKPVVVVQYKTWKGGGIIAVSYEARAFGVTRNMFADD 67 Query: 44 AKALGV-----------------KMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 AK L + + ++ R VV +S E Y D+++ V Sbjct: 68 AKKLCADLQLARVREAHGKADLTHYREASVEVMEVMSRFAVVERASIDEAYIDLTDSVQK 127 Query: 87 TLEELSPRVEIYSID------------------------------EAFCDLTGVRNCRD- 115 L E+ V S + E + + V + Sbjct: 128 RLREMG--VAPISGELLKNTYVQGFPQCGMDRDSLSKEELRRHGLEQWLESLPVGDPHSA 185 Query: 116 ------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 E+RA V + T GIA K LAKLA K ++ + Sbjct: 186 DVKLAVGAIIVEEMRAAVEEETTFQCSAGIAHNKVLAKLACGLNKPNRQ------TILCQ 239 Query: 170 ERQRKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFN-VVLERTVR 227 L S LP+ + +G ++ + + ++ + L ++ ++ HF Sbjct: 240 GSVPGLFSELPIGKIRHLGGKLGTSIKEILDVEYIGQLTQFTVQHLQNHFGDKTGSWLYS 299 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 RG ++ + I CS++F ++ ++ + + +L+ + Sbjct: 300 LCRGIEDEPVKPRQLP-KSIGCSKNFPGKTSLSTREQVQYWLLQLSLELEGRLQKDRDAN 358 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH------- 338 ++ + T S S D++ I + A L + AG Sbjct: 359 NRVA-KLLTVGLNQMGKRLYGSMSRCCALTRYDAQKISSDAFVLLKSFNAAGMHQAAWSP 417 Query: 339 RYQKAGVMLGDFFS 352 + F S Sbjct: 418 PLTLLQLSASKFSS 431 >UniRef50_C8XBY5 UMUC domain protein DNA-repair protein n=23 Tax=Actinomycetales RepID=C8XBY5_NAKMY Length = 510 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 66/399 (16%), Positives = 115/399 (28%), Gaps = 31/399 (7%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 A+ RP PV VL N V A A A+A GV +G + ++ Sbjct: 16 AAARQANRP--ASDPVAVLHANR--VRACTAAARAQGVHVGQRRRDAQSRCPD--LLITG 69 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 + + A M V + +E L+P VE+ C G E ++ Sbjct: 70 VDQDRDARMFEPVAAAVESLAPGVEVLRCGVVACPARGPARYFGSEAAAAERIVDAVEAL 129 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV---WGIG 188 + +GIA +A LA H + L + LP+ D+ IG Sbjct: 130 DVECCIGIADDLEIAVLAAHRS-----------VLVPPGESAAFCAGLPITDLSRDPAIG 178 Query: 189 R----RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTK 244 ++ L +GI T A + F R G P L + Sbjct: 179 PPDRVALTDLLIRLGITTAGAFAALPPEKVATRFGADGVCAHRLALGRPERGLSRRQIPE 238 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYY 304 ++ + + + A + A R +L C + T A + Sbjct: 239 D-LVVEQECDPPLDRVDTAAFAARALAERFHARLADAGLACTRLVITAATDRGATLSRTW 297 Query: 305 GNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 LT + + L Q G + + + G Q L+ + Sbjct: 298 ---RCAAPLTAAATADRLRWQLDGWLTHRQQPGA-ITRLALEPVEAVGSGHIQYGLWGSD 353 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 ++ + G ++ + + Sbjct: 354 GQ--DDQRAGWAFARVQGLLGPDSVLSPVPAGGRSTADR 390 >UniRef50_A4RZL9 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RZL9_OSTLU Length = 429 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 104/273 (38%), Gaps = 29/273 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D +AF+A+ E P L PV V G +I + A+ LG K + L Sbjct: 30 VAHVDADAFFAAVEKQRNPRLRDVPVAV--RQHGDIICVDHRARELGATKHMNPDKCRAL 87 Query: 62 FRRCG---VVCFSSN-----YELYADMSNRVMSTLEELSPRVEIY---------SIDEAF 104 G V S++ YE Y S + + L R+ + S+DEA+ Sbjct: 88 LTPHGGEVVHVHSTDDHMLSYEPYTRASYELHAKLYAACERLRVDGGTLIYQRASVDEAY 147 Query: 105 CDL-TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV 163 L G + + F IR + + +V VG+A+ K LAK+A+ AK GV Sbjct: 148 VQLENGAKPSQRGKAFAESIRRAIAEECGYSVSVGVARNKMLAKIASKLAKPN-----GV 202 Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKK-LDAMGIKTVLDLADTDIRFIRKHFNVVL 222 V + + + LP + + ++ L ++T D+ + + + + + Sbjct: 203 VVIEDEADLERCFRQLPSSHLPKCNEPLIRRNLALHNLRTAWDVRELNAKRLEALVGLTR 262 Query: 223 ER---TVRELRGEPCLQLEEFAPTKQEIICSRS 252 ER + G ++ K + S + Sbjct: 263 ERALALCKAAHGVDDSEVVHKVHEKNTLSSSMT 295 >UniRef50_C6XYX1 Cytosolic protein n=4 Tax=Sphingobacteriales RepID=C6XYX1_PEDHD Length = 500 Score = 144 bits (364), Expect = 4e-33, Method: Composition-based stats. Identities = 57/390 (14%), Positives = 117/390 (30%), Gaps = 23/390 (5%) Query: 16 TVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 + +P+L G P V + + A EA+ G+ +G K + VV Sbjct: 19 ALRKPELKGVPFVFATPDHGRMVITATTIEAELQGINVGMVAADAKAIVPSLQVVDDIP- 77 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 + + + +P V + D D++G + + T L+ Sbjct: 78 -GKDLKLLSLLGEWCIRYTPFVTVDLPDGLILDISGCTHLWGDERSYLKEVVTRLRSKGF 136 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 V +A T A K V + Q + + +LP + + + RI++ Sbjct: 137 DVRGAMADTVGTAWAIARFGK--------VKPIIEPGEQAEALLSLPPEALR-LDNRITE 187 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 +L +G++ + +R+ F L + + G L+ P + Sbjct: 188 RLQKLGLRNIRSFIHMQRSALRRRFGQQLLLRLDQALGNEQELLQPLQPIE-AYSERLPC 246 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 E I + AI +L+ + + R L + G S Sbjct: 247 LEPIRTAIGIEIAIKQLLEMLCLRLKQDGKGLRTAILKCYRIDGELEQVSIGTS------ 300 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 + T + A + + + Q L+ + + Sbjct: 301 SATYHISHLFK-LFELKIATITPALGIELFVMEASKTEDVPLVQEGLWAGSLGLEAR-AV 358 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 ++D L K G ++ + W + Sbjct: 359 TELIDRLAGKVGANAIHR-YLPVAHYWPER 387 >UniRef50_UPI0001926C03 PREDICTED: similar to polymerase (DNA directed), eta, partial n=2 Tax=Hydra magnipapillata RepID=UPI0001926C03 Length = 501 Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats. Identities = 59/397 (14%), Positives = 107/397 (26%), Gaps = 101/397 (25%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY P+L GKP V+ G +IA EA+ GV + Sbjct: 9 VVLLVDMDCFYVQVVQRKNPELVGKPCAVVQYNAWKGGGIIAVGYEARKFGVTRQMRGDE 68 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K+ +V ++ + + V+ L + +E S+DEA+ DLT + N Sbjct: 69 AKEKCPDIHLVPVPENRGKADLTQFREAGAEVIEILAGFADCLERASVDEAYMDLTELIN 128 Query: 113 C----RDLTDFGRE---------------------------------------------- 122 D+ + Sbjct: 129 RDFCNYDIEEVALHTFQNTNIVGIDNMVTGLTNTQDILKCDLYKQWHEVLHRSEENLKLA 188 Query: 123 IRATVLQRT--------HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 I AT+ + T GI Q K LAK+ K Q+ L + + Sbjct: 189 IGATIADKMRKEVKEKLGFTCSAGIGQNKMLAKIVAGFHKPDQQ------TLVLPDNVAE 242 Query: 175 LMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHF-NVVLE--------- 223 + + + + +G ++ K+L ++ + DL + KH Sbjct: 243 MFQSTKMRKIRSLGGKLGKQLAETFNVEYMSDLLKISSNDLEKHSVGKPAYNTCSNTILL 302 Query: 224 ----------RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ--AICSYA 271 +R+ + + S T I Sbjct: 303 KECMGAINEDMFIRQALKRFSIPRSTIHNKIKSKHKCISAPTIFTYDEEQLFSSRIKVMC 362 Query: 272 ARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 + H I + +P + Sbjct: 363 DK------EFHLATFRIMMKLCDNPGNKKVVMKRGTK 393 >UniRef50_C7DDU4 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=5 Tax=Rhodobacteraceae RepID=C7DDU4_9RHOB Length = 522 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 58/386 (15%), Positives = 113/386 (29%), Gaps = 30/386 (7%) Query: 27 VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 + V + V A N A GV G + L V ++ + ++M Sbjct: 50 LAVDGAHGPVVHAANPAAIEAGVHTGARIVDMRSLIPELRVEY--ADVGGDQILLQQLML 107 Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 P + D D TG + D + LTV + +A T+ A Sbjct: 108 WTRRWCPWTSLDGSDGLILDTTGSDHLHDGEALMLADMQARFAQLGLTVRLAVAPTRGAA 167 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 G + E + ALPV + + + L+ +G+KT+ L Sbjct: 168 WGLARY--------GPERAICPAEDIELRLGALPVKALR-LSDKTDLLLNRLGLKTIGAL 218 Query: 207 ADTDIRFIRKHFNVV-----LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 D + + F + ++ G + + + E + D Sbjct: 219 TDVPRVALVRRFARTELIHNPVMRLDQMMGRLAEPVNSPEDPPR-FMVRARLPEPVQDPT 277 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD 321 + + +L S R I + + ++ T ++D Sbjct: 278 PH---LPALCEALCAELSSAGFGARRIVVSVYKTDGDISHVEAAT------ATGSRDPAH 328 Query: 322 IINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 ++ ++AI G+ + + Q L +L ++D L Sbjct: 329 LLGLFRDRIEAI-NPGYGFDLITLTAAHVEEMADVQSRLGGGTDEG---TELAQLVDRLT 384 Query: 382 AKEGRGTLYFAGQGIQQQWQMKRAML 407 AK G + G + + A + Sbjct: 385 AKFGAAHVTRPIPGNSHIPERREAWI 410 >UniRef50_C4VB58 Putative uncharacterized protein n=1 Tax=Nosema ceranae BRL01 RepID=C4VB58_NOSCE Length = 554 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 78/435 (17%), Positives = 131/435 (30%), Gaps = 78/435 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 ++ D+++FYASCE++ P+ P+ V S + N A+ GVK G P + K Sbjct: 86 IYCHVDLDSFYASCESLDHPEYKSIPLAVGSM--NMLTTSNYVARKYGVKAGMPGYIGKQ 143 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV---RNCRDLT 117 L +V ++ Y S RVMS L +EIY +DEA + L Sbjct: 144 LCPTLKIV--KCDFAKYNYYSERVMSVLSIFDEDIEIYGVDEACLVFDDSKYKKAVMKLN 201 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL-----ERQ 172 D G I + + + V I N++ K + Q + Sbjct: 202 DIGYNISVLNQEASKVRVSSKIVGFDQHYSSTNNSYKIFTPQNDSIYTPITDTKFSFRNI 261 Query: 173 RKLMSA----------LPVDDVWGIGRRISK----------------------------K 194 RKL+ L + + R +SK K Sbjct: 262 RKLVDNIRTLVFISTGLTISSGISVTRGLSKYACGINKPNGSFVIDKNFDSHILDLETDK 321 Query: 195 LDAMGIKT------------VLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEF- 240 ++ +G+ T + +L D ++ FI G + Sbjct: 322 INGIGLATKELLLKAYNIKYIKELRD-NLHFIYLTLPYKSFINLFNLSYGLSVFDFSDRS 380 Query: 241 APTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN 300 + I + TD+ + + KL+S+ C I+ K S F+ Sbjct: 381 NKPVKSIGM-NTSFRPTTDFSDICTVLWCLCTSLCTKLKSKSLVCSTITLHYKFSSFS-- 437 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATRSLDA------IWQAGHRYQKAGVMLGDFFSQG 354 + K D + N L A ++ + GV S Sbjct: 438 ----SRTKQSKTSKLIDDPVQLFNICYDLLLASKVILDTKIVPNKIRLLGVSCSLLTSVN 493 Query: 355 VAQLNLFDDNAPRPG 369 + F Sbjct: 494 KKGMYSFTSTVYNFK 508 >UniRef50_B2AJW9 Putative DNA polymerase, Y family n=8 Tax=Burkholderiaceae RepID=B2AJW9_CUPTR Length = 488 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 56/382 (14%), Positives = 102/382 (26%), Gaps = 18/382 (4%) Query: 16 TVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 VFRP + V + V A A GVK G + + + F + Sbjct: 16 EVFRPTWSTTELAVAVLDKERVHLATPLALAAGVKPGMRRGGVQTIAP--AAILFDRDAG 73 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTV 135 D RV + SP V D++ R +Q + Sbjct: 74 KEEDALARVTMATLQFSPNVAAADEAAVLIDVSTTLRLFGGPRKLRRRIMGTVQTMGFST 133 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 VG A T A L G ++ M+ LP+ + R+ + Sbjct: 134 MVGSAPTAQGAWLLAR---------TGGGTALTTASLQRRMAGLPIHALP-AARKFADWF 183 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 + +G T+ DL +++ + GE E + + Sbjct: 184 EGLGCLTLEDLRRLPRAGLQRRCGADFLDALDRAYGEAPEIFEWVEAPP-AFDATVDLPD 242 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 RI + + + L + H + ++ P + + L P Sbjct: 243 RIENAEQTLAYVRGLLVQMVGWLTARHLAIKRFHVALRHERGRAAIPP--TTIEIALAEP 300 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 +I L + V D +LF + Sbjct: 301 NWHEEHLIRILKERLALVVVE-APMIAVAVSAIDTEPMAPPTESLFPEPGGTHADHA--R 357 Query: 376 VMDTLNAKEGRGTLYFAGQGIQ 397 +++ L+A+ G + Sbjct: 358 LLELLSARLGADRVRQPCLQAD 379 >UniRef50_Q99QR3 Putative uncharacterized protein SCP1.321 n=4 Tax=Streptomyces RepID=Q99QR3_STRCO Length = 341 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 64/344 (18%), Positives = 104/344 (30%), Gaps = 22/344 (6%) Query: 61 LFRRCGVVCFSSNYE--LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT- 117 V +Y + L +LSP V+ A +L G Sbjct: 15 RVPTVMHVRCPDRLREGVYRQVL----ELLTDLSPVVQALPPTAALVELKGALRYHGSEV 70 Query: 118 -DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLM 176 G +R L R + V VGI + T+A A+ Q G V + + Sbjct: 71 HRLGEVLRVRTLSRLGVDVRVGIGPSITIAATASA-----QVPLPGGVLTVAPDDVTDWL 125 Query: 177 SALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCL 235 + LP + + G+G R + L GI TV LA +++ RG Sbjct: 126 APLPGEALHGLGPRQAGALHEYGIHTVGLLAAVSPETVQRLLGGKAGRLAADRARGRDPR 185 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + A F + D +R A+ + LR Q R +S ++ + Sbjct: 186 PVVPRALPAAA-TVRMRFDRHVLDGADVRAALLDLVVQLGRLLRRRGQAARAVSLTLQFA 244 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 S +L P+ D+ A R +DA R + D Sbjct: 245 GG------GSWEKSRRLPEPSAHDEDLRTMAYRLIDAAGLQRGRLTGLFLKADDLVDADR 298 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + + R +D + K G G + A + Sbjct: 299 VAQQI-SLDQAREARLVAEATVDRVRDKFGPGVIGPAATARRAS 341 >UniRef50_B7FW32 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FW32_PHATR Length = 592 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 73/446 (16%), Positives = 138/446 (30%), Gaps = 84/446 (18%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + L D++ FYA CE V D P+ +L V+A A+ G+K GD W Sbjct: 37 VVLLLDLDCFYAQCECVRLGWDAMEIPLALLQ--WDSVLAVTYPARKYGIKRGDSWDTVH 94 Query: 60 DLFRRCGVVCFSSNYELYA------------DMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 + ++ V + + +E SIDE F D+ Sbjct: 95 QKSQGACYAVHVPILTTNGSRTDRVATLPPGEVLAWVENQFGDNV-VLERASIDEFFLDV 153 Query: 108 TGVRNCRD---------------------------------------------LTDFGRE 122 T V R Sbjct: 154 TNVCYLESTLDVCDLGSNNSLEGALQETAVVGQSEIMTLVRNGMDVDVEALQRGAHLARC 213 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 IR V T+ GI KT+AKL+ K + ++ + L++ + Sbjct: 214 IRDEVRTLLGFTLSAGIGSNKTIAKLSAAYGKPNGQA------ITYPQFVDTLLADTEIR 267 Query: 183 DVWGIGRRISKKLDAM----GIKTVLDLAD-TDIRFIRKHFN-VVLERTVRELRGEPCLQ 236 +G ++ K + A+ TV +A + + +HF R RG Sbjct: 268 KCRNLGGKLGKTVQALLPADAPTTVHSIAKYLSLPTLEQHFEAPTAAWVYRVARGVDTEP 327 Query: 237 LEEFAPTK--QEIICSRSFGERI--TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + + + I +S + D+ S+ I A ++ + Sbjct: 328 VASKNESALTKSITAFKSLPFDVQGHDWESLASWIRLLADEIVSRVERDASRNGRYP-KS 386 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDS------RDIINAATRSLDAIWQAGHRYQKAGVM 346 T +A N + S+++ P + ++ +++ A +G R ++ G+ Sbjct: 387 CTIQYAGNGTTGQRNKSIRVPFPAERLSKNKKIDELCGVVPKTVQAKENSGFRLRRIGLC 446 Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSEQ 372 DF ++ + ++ F N + Sbjct: 447 AIDFRNRPASGIDRFFCNTCTSSQPK 472 >UniRef50_B1LUJ0 Putative uncharacterized protein n=1 Tax=Methylobacterium radiotolerans JCM 2831 RepID=B1LUJ0_METRJ Length = 562 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 63/392 (16%), Positives = 130/392 (33%), Gaps = 26/392 (6%) Query: 26 PVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P+ V + ++A + EA+ALG+++G+P + + + + ++ E D R Sbjct: 15 PLAVAAEGSGGLRLVALDPEARALGLRVGEPLGRVRARI-GVPLQVYPADPEADRDALLR 73 Query: 84 VMSTLEELSPRVEIYSIDEA----FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGI 139 + +P V + EA + D+ G + R A L R+ + + + Sbjct: 74 LCRWASGYAPLVAPFGPGEAADGLYIDVAGASHLRGGEANLVADLAARLARSSVPAAIAL 133 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A T A GG + + + ALPVD + + L +G Sbjct: 134 ADTPGGAFALAR-------HGGGGRVVVPPGGAPEALRALPVDALR-LDPGTVAGLKRLG 185 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 ++ + +L + + F L + + L +R F + I Sbjct: 186 LRRIGELDALPRGPLARRFGAALLLRLDQALARRPEPLAP-LTEAAAYAAARGFLDPIGR 244 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 + + + A A +L + + + AL G S + Sbjct: 245 QADIVRTVRDLMAETAPRLERDGLGACALRLSLHRVDGALRVLDLGLSRPERCPERV--- 301 Query: 320 RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 +++ L + AG ++ + + Q +L +A + + + D Sbjct: 302 AALVSLRLDRLGSALDAGFGFETVALAVTVTGPMPARQTDLGAASAA----DGVGVLADA 357 Query: 380 LNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 L + GR L + +RA S + Sbjct: 358 LAQRLGRALLR---LEPRASHLPERADRSRVW 386 >UniRef50_C0SPA8 DNA repair protein homolog yobH n=15 Tax=root RepID=YOBH_BACSU Length = 217 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 82/217 (37%), Gaps = 6/217 (2%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + I++++ + L VGI L+KLA K + G+ + +L Sbjct: 1 MAKAIQSSMWREFGLMCTVGIGDNMLLSKLALDLESK--KTKSGIARWRYEDVPNRLWKV 58 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL- 237 P+ +WGIG R+ + L+ MGI TV LA + + K F ++ + G ++ Sbjct: 59 RPLSKMWGIGGRMERNLNRMGISTVGQLAKFPLELLEKKFGIMGNQLYYHAHGIDLSEIG 118 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + S+ T ++ + A + R+ ++ R IS I S Sbjct: 119 APLMQGQISFGKSQILFRDYTKREEIKAVLLEICEEVARRARTYNKVGRTISLGIGYSK- 177 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 +E G S + PT + DI + + Sbjct: 178 --DELGGGFHRSKTIDFPTNITMDIYKCCLMFFNKFY 212 >UniRef50_A2QJ22 Contig An04c0170, complete genome n=2 Tax=Aspergillus RepID=A2QJ22_ASPNC Length = 615 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 65/458 (14%), Positives = 121/458 (26%), Gaps = 108/458 (23%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D + FYAS V +P L P+ V V+ N EA+ G++ + K + Sbjct: 62 DYDCFYASVFEVEQPVLKSLPLAV--QQKQIVVTCNYEARRRGLRKLQLIKEAKQICPDV 119 Query: 66 GVVCFSSNYELYADMSNRVMSTLEE--LSPRVEIYSIDEA-------------------- 103 +V + + D S + + +VE DE Sbjct: 120 VIVLGE-DLSRFRDASKDLFHYIRSFVWGEKVERLGFDEVCIASIDSATDLGSLSEMPVE 178 Query: 104 -----FCDLTG-------VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 F T + +R + Q+ T VGI+ +K LAKLA Sbjct: 179 MVLHGFLGCTDEDTSAWLYTRLLVASHLAGYLRGQLEQQKGYTATVGISTSKLLAKLAGS 238 Query: 152 AAKKWQRQTG----GVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM--------- 198 K + T L+ + A + + GIG ++++KL Sbjct: 239 THKPNNQTTLLPPYTTPTLAAPSNVLDFLDAHEIRKIPGIGSKLTRKLSHYLADGGAHSA 298 Query: 199 -----------GIKTVLDLADTD---IRFIRKHFN------VVLERTVRELRGEPCLQLE 238 TV D+ + + + R L G ++ Sbjct: 299 PAVTTDDTADSNKVTVRDIRLLPGMGPSLLSRILGGPGAPRDIGVRVWGLLHGVDNTEVV 358 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR------------------- 279 + +I S+G + S+R+ + ++R Sbjct: 359 QAGDLPTQISIEDSYGR-LDSLDSVRKELVLLTGSLLRRMRTDLTEKDRETDSIAANQSA 417 Query: 280 --SEHQYCRFISTFIKTS-----PFALNEPYYGNSASVKLLTPTQDSRD---------II 323 + + T A + S S L + + Sbjct: 418 MSKVRWLAHPRTLRLSTRPRSATDSAQSYHGGRISRSAPLPGYVFHLDESVDALAERLVQ 477 Query: 324 NAATRSLDAIWQA--GHRYQKAGVMLGDFFSQGVAQLN 359 + + G + V + + + Sbjct: 478 DQLLSMFRKLHPERSGWNLRLMNVAVTNLVDAAGERKQ 515 >UniRef50_A5V5C0 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=4 Tax=Alphaproteobacteria RepID=A5V5C0_SPHWW Length = 515 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 62/382 (16%), Positives = 115/382 (30%), Gaps = 26/382 (6%) Query: 19 RPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYEL 76 P ++ G C+ A + A ALG+ G + GV + Sbjct: 32 NGCPPDAPFALVEKRKGAICLAAVDRAALALGMVPGLSLADARARLPDLGVA--DHDPPA 89 Query: 77 YADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVG 136 A R+ + +P V + D D++G + R+ A L R L V Sbjct: 90 DARFLERIADGCDRYTPMVALDPPDGLLLDISGCAHLFGGEGALRDDLAARLGRLGLEVL 149 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 +A T A + ALPV+ + G+ + L Sbjct: 150 SALADTPDAAHALARYR--------------PEPVAGATLGALPVEAL-GLDGEETVGLR 194 Query: 197 AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 G + + DL R + F +R + G +++ + ++ R F E Sbjct: 195 RAGFRRLDDLEARPSRLLAARFGEAAPDRLRRIAGGRDVRITP-RRPEPALMLERRFAEP 253 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 I AI +AA ++ + H+ R + + + V+ Sbjct: 254 IGRTEGALAAIGELVGQAAVRMEAAHRGGRRFEAQLFRTDGLVRALRIETGLPVRDARVV 313 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 + + +L G + + + F QL L +L + Sbjct: 314 ---MRLFDERLAALADPVDPGFGFDLVRLSVPMFEPLAPLQLPLEGGALA---QGELAQL 367 Query: 377 MDTLNAKEGRGTLYFAGQGIQQ 398 +D L+ + GR + Sbjct: 368 LDRLSTRLGRHRVRRLAPRDSH 389 >UniRef50_Q2TTW3 UmuC n=8 Tax=Enterobacteriaceae RepID=Q2TTW3_ECOLX Length = 202 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 124/190 (65%), Positives = 146/190 (76%) Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 + L N+ R KL+S PV+++WG+GRRISKKL+ MGI T L LA FIRK+FNVVLE Sbjct: 4 LTLGNIRRTEKLLSLQPVEEIWGVGRRISKKLNTMGITTALQLARATPVFIRKNFNVVLE 63 Query: 224 RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 RTVREL GE C+ LEE P KQ+I+CSRSFGER+T Y +MRQA+C YA RAAEKLR E Q Sbjct: 64 RTVRELTGESCISLEEAPPPKQQIVCSRSFGERVTTYEAMRQAVCQYAERAAEKLRGERQ 123 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 +CR I+ F+KTSPFA+NEPYYGN AS KLL PTQD++DII AA R+LD IW GHRY KA Sbjct: 124 FCRHIAVFVKTSPFAVNEPYYGNMASEKLLIPTQDTQDIIAAAVRALDRIWVDGHRYAKA 183 Query: 344 GVMLGDFFSQ 353 G ML DF Sbjct: 184 GCMLNDFAPD 193 >UniRef50_C8VB00 DNA polymerase eta (Eurofung) n=19 Tax=Eurotiomycetidae RepID=C8VB00_EMENI Length = 674 Score = 141 bits (354), Expect = 7e-32, Method: Composition-based stats. Identities = 70/476 (14%), Positives = 130/476 (27%), Gaps = 126/476 (26%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CE V +P+ V +IA N A+ G+ + K Sbjct: 44 VIAHIDLDAFYAQCEMVRLGTPRERPLAV--QQWDSLIAINYPARKFGITRMISAKEAKA 101 Query: 61 LFRRCGVVC------------------------FSSNYELYADMSNRVMSTLEE------ 90 + + Y S +++ T++ Sbjct: 102 KCADIVLQHVATFREGEGGKWAYREDAWKNIGTDKVCLDPYRAESRKILGTIKRELSKCY 161 Query: 91 ------------------LSPRVEIYSIDEAFCDLTGV---------------------- 110 VE S+DE F DL+ + Sbjct: 162 SELNGDLSGLGLSSQIKLQEALVEKASVDEVFIDLSPLVFGVLLQRYPEMREKPHGDDRV 221 Query: 111 ----------------------------RNCRDLTDFGREIRATV--------LQRTHLT 134 + D D I A + T Sbjct: 222 ALLPCPPTTALEWDTEDCLVDLDENETEVDDPDWDDVAMLIGAEIVRSVRTAVWNSLSYT 281 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 GIA+ K +AKL + K ++ + + +S + +G ++ + Sbjct: 282 CSAGIAKNKMMAKLGSATNKPNKQ------TVVRNRAIQNFLSGFKFTKIRMLGGKLGDQ 335 Query: 195 LDAM-GIKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 + AM G + + +L + R + +RGE ++ + ++ ++S Sbjct: 336 VTAMFGTEQISELLKVSLEQFRAKLNDDTAVWLYGIIRGEDKSEVNP-RTQIKSMLSAKS 394 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 F I + + +AA +L E + + AL+ S +L Sbjct: 395 FRPSINTLDQADKWLHIFAADIYGRLVEEGV----LEHKRRPKTIALHHRQGAQVKSRQL 450 Query: 313 LTP---TQDSRDIINAATRSLDAIWQAG--HRYQKAGVMLGDFFSQGVAQLNLFDD 363 P T D + L I G + +G F + Sbjct: 451 PIPGSATIDEDLLFELGKTLLRQIAADGAAWPCANISMSVGGFEDGTSKNQAIDGF 506 >UniRef50_A4XTN1 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=33 Tax=Gammaproteobacteria RepID=A4XTN1_PSEMY Length = 473 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 58/393 (14%), Positives = 122/393 (31%), Gaps = 27/393 (6%) Query: 23 WGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADM 80 +P+V+L + A N A+ALG+K G + L R + Sbjct: 25 QTEPLVLLGGPPQRRVLQAVNPAARALGLKPGQLLSAAQALTRGF--ASADYDLAAIERW 82 Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 + + S +V ++ ++ L + +A Sbjct: 83 QQFLAAWAYGFSAQVSLHYPRCLLLEVGSSLGLFGPWPHFEARLRRELGELGFQQRITLA 142 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 A++ + + + + R + LPVD + G+ R + L MG+ Sbjct: 143 PNPVAARMLANVH--------DGLAIGDAAELRAALERLPVDRI-GLSRETASALTRMGL 193 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 +++ L + + F L R + L GE L L+ + P + + + Sbjct: 194 RSLQQLLALPRDGLARRFPAELLRHLDSLLGERALALDFYRPPDR-FDTRIELNFEVESH 252 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSR 320 ++ + A A L + + ++ ++ G LL+ +D Sbjct: 253 QALLFPLRRLTADLAAYLAGRDSGVQRFTLHLEHRNPPASQLVVG------LLSAERDPA 306 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 ++ L+ + + + + LFD S + + L Sbjct: 307 MLLELTRGRLEQLQLP-APVLALRLEARELPAFAPQHRQLFD--ERPQQSLPWEQLRERL 363 Query: 381 NAKEGRGTLY----FAGQGIQQQWQMKRAMLSP 409 A+ G + A +Q WQ + +P Sbjct: 364 RARLGDEAVQGLGVRADHRPEQSWQAESDRRTP 396 >UniRef50_B2T2I7 Putative uncharacterized protein n=3 Tax=Burkholderia RepID=B2T2I7_BURPP Length = 593 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 47/371 (12%), Positives = 107/371 (28%), Gaps = 13/371 (3%) Query: 41 NAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSI 100 + +A GV G L + +++ + L +P+V + Sbjct: 66 DLDALRAGVHAGHSRSYALALAPGLEL--LAADTARETQAFEAIALALLTYTPKVSLTEA 123 Query: 101 DEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 ++ + + T + A T A A A+ + Sbjct: 124 HTLLLEVGSGLRLFGGLRALLSRVSATVAEFGYTARIACAPT---AWGAWLLAQARAVRQ 180 Query: 161 GGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV 220 + +++ L V + + + L +G T+ DL + + F Sbjct: 181 KNRWHVIKETSLARVLDGLSVSLLP-VTQAHRDALAHVGCTTLADLRQLPRSGVVRRFGS 239 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + + + G E F R+ + ++ A + A L + Sbjct: 240 GILDLLAQAYGTRPDPRESFRAPA-SFHAQLELPSRVDNADALLFAARRLIVQLAGWLSA 298 Query: 281 EHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRY 340 H + ++ + + P S V P++D+ +I L+ A Sbjct: 299 HHAALSGYTLLLEHELASRHAPTTS-SLKVAWAIPSRDAEHLIWLLREKLNQTVLA-APV 356 Query: 341 QKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQW 400 + ++ LF + + +++ L+A+ G + + Sbjct: 357 IELKLVADQIGEYAGQSDTLFPMPES--DGDSIARLLERLSARLGPENVLQMSVQDDHR- 413 Query: 401 QMKRAMLSPRY 411 +RAM Y Sbjct: 414 -PERAMRVEAY 423 >UniRef50_D1SIT0 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=3 Tax=Actinomycetales RepID=D1SIT0_9ACTO Length = 557 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 63/405 (15%), Positives = 117/405 (28%), Gaps = 32/405 (7%) Query: 19 RPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA 78 PVVVL N VIA + A+A G++ G + + VV + Sbjct: 25 DGVPATDPVVVLHANR--VIACSERARAEGIRRGLRRREAQGRCPHLTVV--DHDPGRDV 80 Query: 79 DMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG-REIRATVLQRTHLTVGV 137 V++ +EE+ VE+ G + I V Q + Sbjct: 81 RAFEPVVAAVEEVVAGVEVIRPGACATAARGPSRYLGGEEAAAERIVEHVAQSCAVESQA 140 Query: 138 GIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA 197 GIA A LA + R+ ++A PV+ + ++ L Sbjct: 141 GIADGVFAAGLAAREG-----------RIVAPGGTREFLAARPVEALGR--PALADLLRR 187 Query: 198 MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 +G++T+ + A + F R G L P + + + E + Sbjct: 188 LGVRTLGEFAALPAGDVLARFGFDGALAHRLAGGRDDRPLAVRQPPAD-LTVTADYDEPV 246 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + A A R E+L C + T+ + + + Sbjct: 247 DRVDAAAFAARMLAERLHERLAGYGLACTRLGIEAVTAHGQELHRVWRHDGLLTAAAIAD 306 Query: 318 DSRDIINAAT-----RSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 R ++ R + + ++ +Q Q L+ + E+ Sbjct: 307 RVRWQLDGWLSGSNGRGGTRPARPTAGIVRLRLVPDGVLAQAGLQPGLWGETG--EERER 364 Query: 373 LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 + + G + A G + + L P D Sbjct: 365 AHRALSRVQGILGPEAVVTAVLGGGRSPA-DQVRLVP-----WGD 403 >UniRef50_D1UT44 Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UT44_9BURK Length = 599 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 48/368 (13%), Positives = 107/368 (29%), Gaps = 13/368 (3%) Query: 44 AKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEA 103 A GV+ G L + +++ + L +P++ + Sbjct: 69 ALRAGVQPGHSRSYALALAPELKL--LTADAGREIQAFEAIALALLTYTPKLSLADTHTL 126 Query: 104 FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV 163 ++ + + T V A T A A A+ + G Sbjct: 127 LLEVGSGLRLFGGLRTLLARVSATVAEFGYTARVACAPT---AWGAWLLAQARANRQGRR 183 Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 + + +++ LPV + + +G T+ +L + + F + Sbjct: 184 WHVVKEDSLARVLDRLPVSLLP-VAPTYRDAFAHLGCATLAELRRLPRAGVVRRFGSGIL 242 Query: 224 RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 + + G E F R+ + ++ A + A L + H Sbjct: 243 DLLAQAYGTRPDPRESFRAPA-SFHAQLELPSRVDNADALLFAARRLIVQLAGWLSAHHA 301 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKA 343 + ++ + + P S V P++D+ +I L+ A + Sbjct: 302 ALSGYTLLLEHELASRHSPKTS-SLRVAWAVPSRDAEHLIWLLREKLNQTVLA-APVIEL 359 Query: 344 GVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 ++ LF E + +++ L+A+ G + + + Sbjct: 360 KLVADQIAEYAGQSDTLFPMPES--DGESIARLLERLSARLGPENVLQMSVQDDHR--PE 415 Query: 404 RAMLSPRY 411 RAM Y Sbjct: 416 RAMRVEAY 423 >UniRef50_A0LTK7 Putative uncharacterized protein n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LTK7_ACIC1 Length = 527 Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats. Identities = 54/386 (13%), Positives = 112/386 (29%), Gaps = 33/386 (8%) Query: 25 KPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRV 84 P V+ G +++ + A+A GV+ G W + + ++ +++ + + V Sbjct: 35 TPCAVI--ARGRILSCSPAARAAGVRRGQRWREAQACCPE--LLGHTADPGRDSRVFEAV 90 Query: 85 MSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKT 144 + + E++ ++ G + R+ ++ V VGIA Sbjct: 91 VRRVAEVAAGPDVVRPGLLVARAGGAARYWGGEEPLRQRIVDGVRSLGFPVRVGIADGTF 150 Query: 145 LAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVL 204 A A + + R ++ LPV + G +S+ L G++T+ Sbjct: 151 AAVQAAYED-----------RIVPPGRSVDFLAELPVHRL---GPPLSEILPRFGLRTLG 196 Query: 205 DLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 D R + + R RG P L I R F + + Sbjct: 197 DFTSLPRRTVVTRWGEDAGRAHDMARGVPLRFLVRAHDPPV-IAVHRIFDPPLDRVDTAS 255 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 A E+L C + ++ ++ + V + P I++ Sbjct: 256 FIARVAAEELHEQLTRRGLGCLRLVVEVRDESGRIHARAW---RRVDAVLPVFSVAAIVD 312 Query: 325 AATRSLDAIWQAG------HRYQKAGVMLGDFFSQGVAQLN-----LFDDNAPRPGSEQL 373 L +G + + V + L + Sbjct: 313 RVRWQLAGWLDSGNVSGGLAALRLVADEVTRAVGWDVPLWDGGNDVLRGQADSIHRHTDI 372 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQ 399 V+ L G + A + Sbjct: 373 ARVLTRLQGLLGESAVVSAVVDGGRD 398 >UniRef50_B5HS70 Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HS70_9ACTO Length = 323 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 66/321 (20%), Positives = 102/321 (31%), Gaps = 17/321 (5%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGI 139 +V+ L LSP V+ A DL G D G +R + R + V VGI Sbjct: 17 RQVLEELAGLSPVVQALPPTAALVDLRGALPYYGVDARRLGEVLRIRTISRLGVDVRVGI 76 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 T T+A A+ Q G V E + LPVD + GIG R + L G Sbjct: 77 GPTITVAATASG-----QIPRPGGVLAITPEEVAGWLGPLPVDALHGIGPRQATVLRDYG 131 Query: 200 IKTVLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 + V LA +++ RG + P + F E Sbjct: 132 VHCVGLLAALPPATVQRLLGGKAGRLAADRARGIARPVVPRALPATASV--RYRFDEHTL 189 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 D +R A+ R +LR Q R ++ + + + +L P+ Sbjct: 190 DGAVVRAALLELVVRLGTRLRGRDQAARALTLSLTFAGG------GSWDKTRRLTAPSAH 243 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 D+ A + +DA + D A L + R +D Sbjct: 244 EDDLRQLAYQLMDAAGLQRGLLTGLVLKAEDLLDADQAPRQL-SLDDAREARLATEGAVD 302 Query: 379 TLNAKEGRGTLYFAGQGIQQQ 399 + K G + A + Sbjct: 303 RIRDKFGTRVIGPAAVFRRAS 323 >UniRef50_A1BA10 Putative uncharacterized protein n=6 Tax=Rhodobacteraceae RepID=A1BA10_PARDP Length = 506 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 57/397 (14%), Positives = 111/397 (27%), Gaps = 36/397 (9%) Query: 16 TVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 P+ + + + A N A+ G ++G + + + + Sbjct: 25 RRGDAWPEDIPLALAAPGPHGPVIHAANRAAERAGARIGTRAVDSRAICP--ALHIEPAE 82 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 E A R+ P D D TG + R L Sbjct: 83 PERDAARLARLAFWARRWGPYSTPDGDDGIILDTTGAAHLFGGEAAMLAEIQAGFARAGL 142 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 T + +A T+ A + T ++ LPV + + Sbjct: 143 TARLALAPTRGAAWALARFGPERAICT----------DPLPALAPLPVAGLR-LSGETLL 191 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHF-----NVVLERTVRELRGEPCLQLEEFAPTKQEII 248 L +G+KT+ DLA + + F + + G L + E Sbjct: 192 LLRRLGLKTIGDLAAIPRLSLMRRFARAEPQDNPLVRLDQALGRAAEPL-DAPEPAPEFA 250 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 E + D + A ++ + + CR + + + Sbjct: 251 AEARLAEPVMDPSD---WLPGLLADLCAQMAAADRGCRRLCLSVFRVDGERRDIR----- 302 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 V + PT+D ++ L+ + G+ + + AQ L Sbjct: 303 -VAMAAPTRDPGHLLRLFDGRLERL-DPGYGFDLIRLAAEAVEPLAQAQPGLDGAAPTGL 360 Query: 369 GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 L ++D L A+ G T+ ++ +RA Sbjct: 361 ---ALARLVDRLAARFGAQTISR--PLPRESHVPERA 392 >UniRef50_A1SHX1 Putative DNA-directed DNA polymerase n=1 Tax=Nocardioides sp. JS614 RepID=A1SHX1_NOCSJ Length = 520 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 58/395 (14%), Positives = 107/395 (27%), Gaps = 26/395 (6%) Query: 18 FRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELY 77 P V S V A NA A+A GV+ G + V + Sbjct: 20 DEGLPTHLPAAVFSA--NIVQACNAGARAFGVRRGMRRRDAQGRCPELKVYAAIPD--RD 75 Query: 78 ADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL-TVG 136 A V++ +EEL P V G + A L + Sbjct: 76 ARAFEPVLAAVEELRPGVAPLRPGLVALRAPG--RFYGGEPAAAALVAERLVGLGVWDCR 133 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI--GRRISKK 194 VG+A A+ A A + + LPV+ + + GR Sbjct: 134 VGVADELFTAEQAARRAAPQ------DCFVVEPGESVPFLRGLPVEVIEDLPDGRDAVSL 187 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 L +G++T+ L D +R F + R + G +L E+ C F Sbjct: 188 LKRLGLRTLGQLGDLAAADVRDRFGRQVAWVHRVV-GGDGAELLATRIPPPELACHVDFE 246 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 + ++ ++ A R L +H C + + + Sbjct: 247 PPLDSAETIGFSVRQTADRFVAGLARQHLVCTEVRIEARCE-GEAEPSCSRVWLHPRWFG 305 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQ----KAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 + + + G + + + V L+ Sbjct: 306 AADLVDRLHWQLQGARSGVPGRGGQVRAPVDRVVFEPVTVVPDAVHADGLWGGTE----- 360 Query: 371 EQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 E++ + + G + + ++A Sbjct: 361 ERVERGIARVQGLLGHEAVVRPVLQGGRCPGDRQA 395 >UniRef50_B6K7S5 Sister chromatid cohesion protein Eso1 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K7S5_SCHJY Length = 884 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 56/459 (12%), Positives = 124/459 (27%), Gaps = 96/459 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AFYA ETV P+ V +IA N A+ G+ D K Sbjct: 28 VVVHVDQDAFYAQVETVRLKLDHSVPLAV--QQWDNLIAVNYAARPYGITRFDTAENAKK 85 Query: 61 LFRRCGVVC---------------------FSSNYELYADMSNRVMSTLEELSPRVEIYS 99 + ++Y + S +++ L + S V+ S Sbjct: 86 KCPELNLAHVQTWKVGEREPKYHEKPEWESHKVCLDMYRNESKKILGILSKYSKLVKKAS 145 Query: 100 IDEAFCDLTG-----------------------------------VRNCRDLTD------ 118 IDE+F DLT + + Sbjct: 146 IDESFVDLTAEIKKKLIQDYSFLGVPPEDLSLPLPTAPTVLWTEELGRVFGEEEGLLSEA 205 Query: 119 ------------FGREIRATVLQR----THLTVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 +G I + T GI++ L+K+ + K ++ Sbjct: 206 KNGGDWDEVFLHYGARIVKEIRNEIFNTLGYTCSAGISRNAMLSKILSSKNKPNKQ---- 261 Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVV 221 + ++ + + ++ G + ++L + + + D+ + + + Sbjct: 262 --TVLLNSMVDHYLADVRLSELRLFGGKYGEELGKKLNAEYIKDIRAIPMDELIRILGDR 319 Query: 222 -LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 + G ++ T+ + ++ + +A+ + Sbjct: 320 DAQVVWNVCNGIDNSEITNVNNTQSMLSAKNFLRSKLKSSEEAMKWFRVFASDLMSRYMD 379 Query: 281 EHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI-INAATRSLDAIWQAG-- 337 Q R + + L + S+ + S + N A + L + A Sbjct: 380 VEQIKRPKTFVLNVVTGNLRK-----GRSIPIAPSDAISEEFVYNNAAKLLAQLASAYDI 434 Query: 338 HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 V +F + + + + V Sbjct: 435 FPIVHLSVSFRNFEDRDTKLQGIESFMQSLTQPKNIEKV 473 >UniRef50_D2Q395 Nucleotidyltransferase/DNA polymerase-like protein involved in DNA repair n=2 Tax=Nocardioidaceae RepID=D2Q395_9ACTO Length = 545 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 63/410 (15%), Positives = 128/410 (31%), Gaps = 30/410 (7%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 AS E P+ VL G V+A +A A+A GV+ G + + +V Sbjct: 36 ASAE----GVPPETPLAVLQ--KGRVLATSAAARAEGVRRGLRAREAQSRCPE--LVVLK 87 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 + + A + V+S LE L+P +++ G E L+ Sbjct: 88 YDPVVDARAFDPVISCLEALTPGIQVIRPGMCALKARGPSRYYGSEPAAAEKLLDRLETY 147 Query: 132 HLTVG-VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 + VGIA A+ A A V + + ++ L +D + Sbjct: 148 DVPGSRVGIADGPFAAEQAARA-----ASAQTRVRVVPPGGSAEFLAPLSIDTLER--PA 200 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 ++ L +G++++ A + F + RG+ + E+ + Sbjct: 201 LTDLLRRLGLRSLGAFARLPAAEVLARFGPDGAFAHQLARGDDDRPVV-VRQIPPELTRT 259 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 F + + AI + A +L + C + + T ++E + + Sbjct: 260 LDFEPPVDRVDQVAFAIRTVADELIGRLSALGLVCTTLRVEVGTESGRIHEREWLHPR-- 317 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 + T + S A + + ++ G L+ Sbjct: 318 -WFSATDVVDRVRWQLQGSGTATSELTSPVVRLRLIPEQADPVGAHADALWGGGPD---- 372 Query: 371 EQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLR 420 E++ + + + G G + + + +R L P D Sbjct: 373 ERIHRALSRVQSMLGHGAVVTPVISGGRGYA-ERQTLVP-----WGDPPT 416 >UniRef50_B2I406 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I406_ACIBC Length = 261 Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats. Identities = 63/208 (30%), Positives = 108/208 (51%), Gaps = 2/208 (0%) Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 +K F+VVL RTV ELRG PC+++E P++++II S+SFG+R+T +++AI Y A Sbjct: 3 KKQFSVVLARTVMELRGIPCIEIEHSPPSQKQIISSKSFGQRVTALEDLQEAISRYTQDA 62 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 +LR + C I F ++PF YY S++ + PT + ++ AA + ++ ++ Sbjct: 63 FRRLRKANLLCGCIIVFAHSNPFDNKRKYYYKSSTSGFVVPTDNVLTLVEAAVKLIEKVY 122 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAG- 393 G Y+K G++L + + +L D E LM +++ K G+ L Sbjct: 123 TEGIEYKKCGLILTGLEPKSLFTYDLLTDMDDIAKQENLMLAFESITNKFGKKKLAVGTC 182 Query: 394 QGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 ++W M R LS Y +LL++ Sbjct: 183 MFPDRKWTMCRNSLSQNYF-SWDELLKL 209 >UniRef50_C0WP28 Possible DNA-directed DNA polymerase n=3 Tax=Lactobacillus RepID=C0WP28_LACBU Length = 327 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 68/240 (28%), Positives = 107/240 (44%), Gaps = 13/240 (5%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLS----NNDGCVIARNAEAKALGVKMGDPW 55 +F L D +FYASCE V R + P+VVLS N G ++A + EAK L + Sbjct: 11 VFFLIDNKSFYASCEAVQRGFNPLKIPLVVLSEQENTNGGLILATSPEAKRL-FHLKANV 69 Query: 56 FKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDEAFCDLTGVRNC 113 +Q++L + + LY + ++ E + V YSIDE+ D+T Sbjct: 70 SRQRNLPQDPRLCVVPPRMNLYIKRNLQINQIFTEFASEQDVWPYSIDESIVDMTHSWKL 129 Query: 114 RD--LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 + R I+ TV +R L VGI AK+A K + G ++ Sbjct: 130 FGDTPREVARVIQKTVRKRLGLYTTVGIGDNPVQAKIALDVYAKHTPELIG--EIHYETV 187 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + + + DVWGIG+R +K L+ +GI + LA T+ ++K + V+L G Sbjct: 188 PKTIWPINNLTDVWGIGKRTAKHLNRLGIHNMYQLAHTNPYLLKKKW-VLLVNNYLRRHG 246 >UniRef50_Q1N9P2 Putative uncharacterized protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9P2_9SPHN Length = 538 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 73/400 (18%), Positives = 125/400 (31%), Gaps = 34/400 (8%) Query: 16 TVFRPDLWGK---PVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 V RPDLW P VV+ G + +A+ A+G+ G + V F Sbjct: 28 RVARPDLWAAGEGPAVVVDMVRGAMRLGCIDADGLAIGLMPGMTLADARAREPDLRV--F 85 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 ++ D R+ +P ID D++G + D L+R Sbjct: 86 ETDPHADQDWLERLCDGCARYTPNAAPDGIDGLMLDISGCGHLWGGDDALAADAVERLER 145 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 L V +A + A + + LPV+ + G+ Sbjct: 146 HGLRVRHALASSPEAAHALARFPGP------------PAPDEDAAVRRLPVEAL-GLDPD 192 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 + L G++TV DLA I F + L G L + I Sbjct: 193 SAVALRRAGLRTVGDLAARPAAPIAARFGEEAIDALDALLGRGHRPLAP-RRPRAAIRID 251 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 R F E I + + AA+A ++L + R S S + Sbjct: 252 RRFAEPIGSTAYALKILEDMAAQAGDRLAERGEGGRRFEAIFFRSDGLAFPLRVETSLPI 311 Query: 311 KLLTPTQDSRDIINAATRSLDAI---WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 + D+ I+ +DA+ G + + + QL L A Sbjct: 312 R------DAPAILRLMRERIDALSDPIDPGFGFDMLRLTVPQAEKLAPTQLALEGGEA-- 363 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + + ++D L+ + GR + + ++A L Sbjct: 364 RREDSVAALVDRLSIRAGRARIQRLA--PRDSHIPEQAQL 401 >UniRef50_Q47EP4 Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica RCB RepID=Q47EP4_DECAR Length = 479 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 53/378 (14%), Positives = 101/378 (26%), Gaps = 24/378 (6%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 L P V+S G V+ + A+ GV G L G++ F + Sbjct: 18 LRQSPSAVVS--RGRVLVGDLAARLAGVCAGQKLSTALGLQP--GLMVFERDEVREIKAL 73 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQ 141 + +P + + S D ++ E + A Sbjct: 74 ESLACWAGRFTPTISVVSPDVLLLEIGSCLRLFGGAPAIIEAVLAGCAEQSYSTNWAAAP 133 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK 201 T A A + + ++ LP G I +L++ G+K Sbjct: 134 TPLGASWLARNA--------CAGIHIEISAMQAALADLPCAIDEWPGEVI-DRLESFGLK 184 Query: 202 TVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 + DL +R+ + G+ + FA + R+ Sbjct: 185 RLGDLRQLPGAGLRRRIGNQPMDDLLRAWGDLPDPQKPFAFPE-SFAIDLELPARVEHAE 243 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD 321 ++ A A A L R + + S P D Sbjct: 244 ALAFAGQRLFAALAGWLHGRQLLLRCCTLHLAHDDGEKTPLALRFS------EPAADEGR 297 Query: 322 IINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 + L + + + + + A +LF+ A G+ ++ L Sbjct: 298 FMRLLREHLARLQLK-APVEALCLQADELLDKPGASAHLFEQAATGEGALAC---LERLR 353 Query: 382 AKEGRGTLYFAGQGIQQQ 399 A+ G G + + Sbjct: 354 ARLGEGAVQALSLMADHR 371 >UniRef50_B8H428 Protein imuB n=6 Tax=Alphaproteobacteria RepID=IMUB_CAUCN Length = 458 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 60/374 (16%), Positives = 107/374 (28%), Gaps = 27/374 (7%) Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 G+ G L +V + + SP V I D F D+ Sbjct: 2 GLFPGQKAADALALVPD--LVTADHDPAADRAALEALCDWCVRFSPAVAIDGDDGLFLDI 59 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 TG + + L R + IA T A G + ++ Sbjct: 60 TGTDHLWGGEAAMLVDLVSRLARWGVPARAAIADTAGAAWALAR--------FGPDLAIA 111 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 Q ++ LPV + +G +L +G+ V + + K F + + Sbjct: 112 PPGEQTAAIATLPVAALR-LGDAAEAQLPRLGLHRVGQVLALPRAQLAKRFGLAAVLRLD 170 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 + G L P +F E I+ + + A +L +E + + Sbjct: 171 QALGAASEALTFRRPASPWF-DRLAFFEPISAPEDLARVAADALALICARLEAEGRGAKR 229 Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 G L +D++ + LD + G + V Sbjct: 230 FEVVFHRLDGRAFPVRVG------LARIGRDAQRLARLVKPKLD-MVDPGFGIEVVTVHA 282 Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM- 406 AQ D +A E L ++D L + G ++ A + +R++ Sbjct: 283 FAVEPMAAAQAR-LDADAAASADETLAPLIDRLVNRLGENRVWRADPF--ESHVPERSVV 339 Query: 407 ----LSPRYTTRSS 416 L P R Sbjct: 340 RVGPLDPPPAARWD 353 >UniRef50_A9CXS2 Putative nucleotidyltransferase protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9CXS2_9RHIZ Length = 562 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 54/397 (13%), Positives = 115/397 (28%), Gaps = 33/397 (8%) Query: 16 TVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 + +P+VV ++A ++ A+A G++ G + L ++ Sbjct: 41 RISDAHPETQPLVVTGTVKNAIRILALDSRARAHGIRKGQSLSDARALVHDLDCHQADAD 100 Query: 74 YELYADMSNRVMSTLEELSPRVE------------IYSIDEAFCDLTGVRNCRDLTDFGR 121 + R+ S E +P V + F D+TG + Sbjct: 101 ADH--AALLRIASWCERYTPLVGLGANPDAERETGVGGDHGLFMDITGCAHLMGGEAALV 158 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 L + +A T A G + + + + + L + Sbjct: 159 ADLEARLLAQGFHARLCLADTPGAAWAMARH---------GAARIISEDSHGEAILPLSL 209 Query: 182 DDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFA 241 + + + L +G+KT+ + + F L + + + G + Sbjct: 210 SGLR-LQPALVASLGRVGLKTIGCITSLPRAPLAARFGAGLMQRLDQALGRETEAISPLM 268 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNE 301 P E+ R F + +T + ++ I + AA E L R + + Sbjct: 269 PVA-ELSTERRFADPVTHHDAVTHVISALAAAMIEPLERRGLGIRRCRLRLFRVDGHVAA 327 Query: 302 PYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 + ++ + L AG + + + AQ ++ Sbjct: 328 LEVQTARPLRDARMI---ERLFAERLAGLHEDLDAGFGFDLIRLDILHADPFEAAQGDM- 383 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 A SE ++D L A+ G + Sbjct: 384 --VAGGRASEGHDALVDRLGARLGLDRVQRFVMADTH 418 >UniRef50_B8K9K1 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Vibrio parahaemolyticus 16 RepID=B8K9K1_VIBPA Length = 466 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 54/425 (12%), Positives = 132/425 (31%), Gaps = 44/425 (10%) Query: 1 MFAL---CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFK 57 ++ ++A YA E +P++++ V+ RNA AK G+ +G Sbjct: 5 IYLHFPTLQLDALYA--EQSE------QPLIIVEGKRFQVVQRNALAKEQGIDLGMGLGS 56 Query: 58 QKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT 117 L ++ + + + + L ++ + ++ T + + Sbjct: 57 ASALCQQ--LQVHPYDESVEHKTLLDIAQWLYMVTSDIALFPPQGILLKATDMLSLYGGL 114 Query: 118 DFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS 177 + L LT + A L + G + + + + Sbjct: 115 KAYWQHVFRHLSTLKLTFHFATGFSPFSAMLLAK--------SEGQFICHDKDEIIQRLQ 166 Query: 178 ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQL 237 P+ + + + L +G+ + L + ++ I + F++ L V L G+ + Sbjct: 167 RYPLIA-TELDPKQVETLSRVGVTHLHQLLELPMQDIARRFDIDLVNYVGRLMGQFKHPM 225 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + + P +Q I + + + + L +Q ++ + Sbjct: 226 DFYHPPEQ-FQSYLELLFDIEHIQWLEKPLGKLLNKLEIFLTLRNQVGYELALTLHQRDH 284 Query: 298 ALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 + S + + + + +L++I Q + L + Sbjct: 285 QDS------SVTFTSASGDYLAHRWMTLCQLTLESIKLE-APVQGLTLSLIRGGELESSS 337 Query: 358 LNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML--SPRYTTRS 415 ++F + + +L + L AK G + + ++A L SP Sbjct: 338 KDIFAGHQGQQSELEL---IGLLQAKLGHERVRKVAMSDDPR--PEKATLLCSP------ 386 Query: 416 SDLLR 420 DL Sbjct: 387 -DLPI 390 >UniRef50_C1E586 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E586_9CHLO Length = 611 Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats. Identities = 77/374 (20%), Positives = 120/374 (32%), Gaps = 66/374 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D +AF+ E P L G P + VIA +A AK GV P + Sbjct: 14 VILHVDADAFFCQVERRRNPALAGCP-ALAVQQHQDVIAADAGAKKAGVTKRTPPADARA 72 Query: 61 LFRRCGVVCFSSN--------YELYADMSNRVMSTLEE------------LSPRVEIYSI 100 L RR G + Y Y S+ + S L VE SI Sbjct: 73 LLRRVGGALVHVHTTTGQRVSYRPYLAASHELHSLLASADLAREVSRDGFNGVAVEKASI 132 Query: 101 DEAFCDL-TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 DEA+ L TG D IR V R + V VG+A K LAKLA +AK R+ Sbjct: 133 DEAYVQLPTGSDLRVDGARCADVIRDVVKARLGIVVSVGVAHNKLLAKLAGASAKPDGRR 192 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIK-TVLDLADTDIRFIRKH 217 + + E L++ P ++ G G ++ K+ A +G+ TV DLA + Sbjct: 193 -----VIVSREDIADLLATTPAHELPGCGGALAAKIRATLGVTATVADLARLPESALVSA 247 Query: 218 FN---VVLERTVRELRGEPCLQLEEFAPT-KQEIICSRS--------------------- 252 GE + + + S Sbjct: 248 LGANPATARLIHARSAGECDDPVRRGRGILNKSVGVHTSLTLTPRAMYGVPGCGVSASGG 307 Query: 253 ---FGERITDYPSMR--QAICSYAARAAEKL----RSEHQYCRFISTFIKTSPFA---LN 300 E + + R + + A+ A ++ +E ++ R ++ + + Sbjct: 308 RPGMFEPLRCRETGRLDSLLRAMASDLAGRVMDLAHAEKRWPRTMTVSLILVLGRSENGD 367 Query: 301 EPYYGNSASVKLLT 314 S Sbjct: 368 GKEVRCSKRGPFPD 381 >UniRef50_B4DB63 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DB63_9BACT Length = 501 Score = 134 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 62/409 (15%), Positives = 121/409 (29%), Gaps = 27/409 (6%) Query: 10 FYASCETVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 F F + W +PV + G V+ A GV G + + Sbjct: 12 FSLQAALRFHEEAWRQPVAITDGDTEKGRVLETTIPAAHSGVWPGMVVTQALARCPSLRL 71 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATV 127 + S +S ++ T LSP +E + DL ++ C D + R + Sbjct: 72 LQRSR--TQEEVVSALLLETTGTLSPLIEATAEGLCVADLRQMKAC-DWEPWARGVVER- 127 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI 187 L V VG+A LA LA A+ ++ + V V Sbjct: 128 FATRQLRVQVGLAANPDLAILAARHAEPALVVQHAGA----------FLAGVAVTAV-DA 176 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 + + L GI ++ +LA + + + G +L P + Sbjct: 177 APGLLEILRDWGIGSLGELARLPRSELIERLGPEAGALWEQAAGRAHRELRLVRPPEV-F 235 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF--ALNEPYYG 305 + F I + + + +L ++ ++ I P + Sbjct: 236 WEAFEFEHPIETTEPLLFILRRQLEQLMLRLEEAYRVAAQMTLTIPLEPGPSNVTAGTDR 295 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNA 365 + + +PT D+ + L+ + + + + LF+ Sbjct: 296 YERTFTIPSPTTDTEVLFRILHTHLENLRLEQQPI-GVRLRVEPVVANRSQF-QLFESPL 353 Query: 366 PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS-PRYTT 413 P + + + A G + ++ Q R L P + T Sbjct: 354 RDPN--RFGETLGRIAALVGAENV--GVVQLEDTHQPDRFQLVAPDFQT 398 >UniRef50_UPI00019063AA putative nucleotidyltransferase protein n=2 Tax=Rhizobium etli RepID=UPI00019063AA Length = 380 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 52/348 (14%), Positives = 107/348 (30%), Gaps = 22/348 (6%) Query: 13 SCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVC 69 S + RP+ P +V S NN + A + AK LG+K + + ++ VV Sbjct: 18 SWRSKERPE---APPIVCSAKLNNAMRLTALDEWAKRLGLKKDQGVAEARAMYPTLEVV- 73 Query: 70 FSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQ 129 + + + + +P V D F D+TG + + + L Sbjct: 74 -EEDPAADRRLLEAIADWCDRYTPLVAFDGKDGLFLDITGCTHLFGGEKALLKDVLSRLF 132 Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR 189 + I+ + L+ + G + E +++ +LP+ + + Sbjct: 133 HMGIDARGAISSSPGLSWAVSRF---------GQSGVIGDEEMERVLMSLPIAALR-LQG 182 Query: 190 RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 + L +G+K + D+ + + + F L + + G + P + Sbjct: 183 QTVDALKKLGLKYIGDVINAPRAPLTRRFGPELLLRLDQALGHEEEPVSPRRPVA-SLSA 241 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSAS 309 E I + A L + R + + AS Sbjct: 242 ESRLIEPIGTEEQILAVTRQVAVSLQPSLEARGAGGRVFELVLFRVDGRVFRI--SVGAS 299 Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQ 357 L P + D + AG+ ++ + + AQ Sbjct: 300 QPLREPKFIAGLFSERLQAVYDDL-DAGYGFEIVRLNVLQHDPFNEAQ 346 >UniRef50_Q1LFT0 Putative uncharacterized protein n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFT0_RALME Length = 527 Score = 133 bits (335), Expect = 9e-30, Method: Composition-based stats. Identities = 59/386 (15%), Positives = 114/386 (29%), Gaps = 17/386 (4%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 PV V+ + + N A ALGV+ G + L VV + + + Sbjct: 31 PVAVIEHERVVL--ANGPAVALGVRYGMRRGGVQAL--SADVVQLDRDLAAESALMTSAA 86 Query: 86 STLEELSPRVEIYSIDEA---FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 L +P V I + EA D+T +++ +G T Sbjct: 87 LALLHFTPAVAIDAEPEAATVMLDVTASLRLFGGHRALCRAIRARVRQLGTFAQIGSGTT 146 Query: 143 KTLAKLANH--AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 A K + R +L+ LPV+ + + + L+ +G Sbjct: 147 AQGAAWLARQPLRKTSRGIVRPARRAVRAARMTRLLDRLPVECLHTL--ADPEWLEGIGC 204 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 +T+ + + + L + + G+ F R+ Sbjct: 205 RTLGQVRRLPRAGLSRRIGTELLARLDQAYGQISSGFAWFEAPP-AFAQRMELPGRVESA 263 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSR 320 + + L + ++ + L E ++L P++D Sbjct: 264 EGVLAGAQRLLLALSGWLAVQQAGVTRCVLMLEHERYRLGEDTDSTPVPLRLAQPSRDPV 323 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + LD I + + + +LF + P L ++DTL Sbjct: 324 HLSKLLREKLDKI-RFHAPVGGLALRVEAMEICVPQSDSLFPEPGAEPAE--LGRLLDTL 380 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAM 406 A+ GR + Q + +RA Sbjct: 381 VARLGRDNVLQ--PHPQADHRPERAN 404 >UniRef50_C4Q445 DNA polymerase eta, putative n=3 Tax=Schistosoma RepID=C4Q445_SCHMA Length = 400 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 54/347 (15%), Positives = 110/347 (31%), Gaps = 75/347 (21%) Query: 38 IARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELS 92 +A + EA+ALG+K G + + + + Y D S+ V+ + E + Sbjct: 5 LAVSYEARALGIKRGMFSDEIRVQHPEVIIFKVPEKRGKAELTRYRDASSEVIQCISEFT 64 Query: 93 PRVEIYSID----------------------------------EAFCDLTGV-------- 110 +E SID E+ +LT Sbjct: 65 SDIERASIDEAYVDLTVLIQDHNLSSLHPNPESYVLVNSDIAEESKLELTETNCVSLSGV 124 Query: 111 -------------RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ 157 R ++ IR V +T GI K++AKLA K + Sbjct: 125 DWIKLLDSNFAEGRRLAVASELVYRIRQAVFTKTGFKCSAGIGPNKSIAKLACSLNKPNK 184 Query: 158 RQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRK 216 + + E L+ ++ + +G ++ + + I+T+ L+ + + K Sbjct: 185 Q------TIIPQESIPILLENTHINKIRNLGGKLGSTVVKKLKIETLGQLSSIPLSVLTK 238 Query: 217 HFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAAR 273 F + G + + + + CS++F R +T +++ + A Sbjct: 239 EFGEKTSKWLHDLSHGIDHEVVTTRSLP-KSVGCSKNFLGRATLTSSEQIKRWLLCLAEE 297 Query: 274 AAEKL----RSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 E+L +Y + + +T+ + LL Sbjct: 298 IFERLDVDYHQHQRYPTRLILYARTTNDPGYIGGISRTLPSNLLQFI 344 >UniRef50_C6XNZ3 Putative uncharacterized protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XNZ3_HIRBI Length = 511 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 54/402 (13%), Positives = 117/402 (29%), Gaps = 25/402 (6%) Query: 23 WGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADM 80 P V++ V+A N A++ + G + + +V + + Sbjct: 21 KRIPFVLVEKGRHGIEVVAANEAAQSRNIYSGLAFTDARARTPD--LVFEEIDRVADRNA 78 Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 ++ + SPRV D ++TG+ + E LQ + IA Sbjct: 79 LQKLADWMVRFSPRVSTDGNDAIVMEITGLDHLFGGEAKLMERIRACLQTNGYISQIAIA 138 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 T A R G V +S L +++ ++ L V + + + + L G+ Sbjct: 139 GTFGAANALARY-----RINIGDVFVSQLGHEKQDLADLSVKALR-LSDKTVQLLRKFGL 192 Query: 201 KTVLDLADTDIRFIRKHF-----NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 + L D + + + F + + + G ++ E S E Sbjct: 193 TRIDQLYGLDRKALTRRFASREAADAVVLRLDQALGIRHEPIKPVIAEP-EWAMRMSCPE 251 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 + + A+ ++ KL R + + + + Sbjct: 252 PVAAQDGVEYALDHLLSQLCHKLDMHGVGARDFCLYAFGVDGKCSHISASS------ASA 305 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 +D+ I ++ I G + L D E + Sbjct: 306 VRDANHIRRLLKEHVETI-NPGFGIDLFMLSAARIEGLDHDAKPLAADMVGGFDEEAFIR 364 Query: 376 VMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 + D L + G + + +R+ ++ T + Sbjct: 365 LADRLAVRLGEKAVQM--PIFHESHVPERSESFSQFATHLME 404 >UniRef50_Q0ANL5 Putative uncharacterized protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ANL5_MARMM Length = 449 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 50/343 (14%), Positives = 100/343 (29%), Gaps = 21/343 (6%) Query: 67 VVCFSSNYELYADMSNRVMSTLEELSPRVEIYS----IDEAFCDLTGVRNCRDLTDFGRE 122 +V ++ + SP V +D D+TG + Sbjct: 4 LVTAPADDRGDIRALTALARWSGRWSPVVAPDPAGPGLDGLILDITGCTRLFGGETALLD 63 Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +V + A T LA A + + + ++ALPV+ Sbjct: 64 AMMEGFAELGFSVRLAAAPTIGLAWGAARFD----PDSRNRPLCIDPDTAADRLAALPVE 119 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 + + +S +L A+G+ L + + F + L R + + RG+ L+ P Sbjct: 120 ALR-LAEGVSSRLRALGLTRAGLLLQQPRAALARRFGLDLPRRLDQARGQESEPLDPIRP 178 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 + S F E + ++ A+ ++L + + R + + S Sbjct: 179 AR-AFRSSLRFAEPVPGLDPIKTALPHLVGPVCDQLTNAGRGARRLVLSLVGSNGRAVRV 237 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 G + I G + + + Q L Sbjct: 238 AIGTA-----AAERDSGHIIRLLGESLDRLEADFGLGVEALHLTAPSTAAFTARQARLDG 292 Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 E ++D L + G + A ++ W +RA Sbjct: 293 TPG----EEATSHLVDRLRLRLGETGVRRAAS--RESWSPERA 329 >UniRef50_B8KMW0 Putative aspartate decarboxylase n=2 Tax=gamma proteobacterium NOR5-3 RepID=B8KMW0_9GAMM Length = 449 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 53/383 (13%), Positives = 111/383 (28%), Gaps = 23/383 (6%) Query: 33 NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 + + A NA A LG++ G + L + + ++ + + ++ Sbjct: 3 DRQRIYAVNATASLLGLEPGMDPASARALAGETPLQLLPRDPDMESKALESLCCWAYGIT 62 Query: 93 PRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA 152 P + + D ++ G +D L + + + T A +H Sbjct: 63 PHLYPFRDDCLMLEIGGSLKLFGGSDAILRHCRKGLAGRGYSADMALGITPLAAWSFSHI 122 Query: 153 AKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR 212 + + G +R+ + LP+ + + + L G T+ ++ Sbjct: 123 S-SDGNSSKGCC-------EREQLEKLPLRTLEPLHEQFIA-LQRGGFTTLGEILALPGA 173 Query: 213 FIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAA 272 + + ++ L GE F P S G + ++ + A+ Sbjct: 174 SLSRRCGSQFRELLQHLSGEVVPPPVHFEPPS-CFADSYPLGYPVRNHDELGPALEQLLT 232 Query: 273 RAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 + LR R I Y S SV+ +D L+ Sbjct: 233 SLEDYLRQRQLQTRQIIWHF------SGLNNYRESLSVRTSEARAPRQDWYRLTRLRLER 286 Query: 333 IWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 + + S +LF S QL +D L+ + G + Sbjct: 287 -QPFAQEVELVQLHADQLESAQPTSGDLFRQAGQSTSSSQL---VDLLSNRLGAQAVN-- 340 Query: 393 GQGIQQQWQMKR-AMLSPRYTTR 414 + + + +P TT Sbjct: 341 SLHYRDAHLPEHSSTKAPSGTTN 363 >UniRef50_A3JJR9 DinP DNA polymerase-like protein n=3 Tax=Marinobacter RepID=A3JJR9_9ALTE Length = 472 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 50/392 (12%), Positives = 114/392 (29%), Gaps = 22/392 (5%) Query: 17 VFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYEL 76 + R +V++ + V+ +A + GV+ G L +V + + Sbjct: 16 IRRSRKQDAALVIVDASGQKVLQACTQASSQGVQPGMRLKTALSLVADLAMVRT--DPQQ 73 Query: 77 YADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVG 136 A + L + + + D ++ ++ E L LT Sbjct: 74 EARVLQDQARWLYRCAAHITLVPPDGLLAEIGSLQKLYGGLPAVWETVEQGLNERRLTAW 133 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 +GI T A+L K G +L+ LP+ + + +L Sbjct: 134 LGIGHTPLAARLIARTGKGECSADQG--------HMLRLLEQLPLAEAE-FDTQACTRLQ 184 Query: 197 AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 +G+ T+ +L + + + ++++G + P + F E Sbjct: 185 RLGLNTLGNLFALPAAELARRLGPKILAHSQKIQGTRPDPQTPWQPPHR-FRQQADFVED 243 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 I + + + E L Q ++ + + S Sbjct: 244 IEHSQGLLFPLQRILSELEEDLCWRQQETDSLNLLLCYRYTEPTRLHIRTSGPE------ 297 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 + +N + ++ + + +L + +E T+ Sbjct: 298 HRAEAFLNLIRLRFEQQPLQAPVVSLVLLVKRFIGREAASGQDLLGETQDM--NEAWHTL 355 Query: 377 MDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 + L A+ G G L + ++A S Sbjct: 356 ISRLQARLGDGALQQLAPHADHR--PEQAWAS 385 >UniRef50_C8VFX8 DNA polymerase iota, putative (AFU_orthologue; AFUA_4G11140) n=3 Tax=Eurotiomycetidae RepID=C8VFX8_EMENI Length = 573 Score = 131 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 61/471 (12%), Positives = 123/471 (26%), Gaps = 122/471 (25%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D + FYAS +P L P+ V V+ N EA+ G++ + K Sbjct: 12 IILHFDYDCFYASVFEAEQPILKTLPLAV--QQKQIVVTCNYEARRRGLRKLQLIKEAKQ 69 Query: 61 LFRRCGVVCFS-------------------------------------SNYELYADMSNR 83 + ++ ++ Y Sbjct: 70 ICPDVVIILGEDLTKFRDASKDLYLFFRRSIWGERVERLGFDEIFMDVTDMITYNAGLLN 129 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGV----------------------RNCRDLTDFGR 121 D T V + F Sbjct: 130 PNDLTHSFFHLDSRDPTVGFAFDATAVYGRTYPNDRSGKPLSEADTQLHLRLLLASHFAG 189 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT---GGVVDLSNLERQRKLMSA 178 +R+ + + T GI+ +K LAK+ A K + T + + + Sbjct: 190 YLRSQLENQKGYTATAGISTSKLLAKVVGSAHKPNNQTTLLPPYSSTGDCESNVLRFLDS 249 Query: 179 LPVDDVWGIGRRISKKLDAM----------GIKTVLDLADTD---IRFIRKHFN------ 219 + + GIG ++S+KL + T+ D+ + + Sbjct: 250 REIRAIPGIGSKLSRKLISHITASDQSAVENKVTIRDVRAFPGMGPSLLERILGGPGAPR 309 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 + + L G Q+ E T +I S+G + + ++R+ + S AA ++R Sbjct: 310 DIGVKIWGLLHGVDGTQVGEARDTPTQISIENSYGH-LDTFEAVRKEMLSLAASLIRRMR 368 Query: 280 ------------------------SEHQYCRFISTFIKTSPFALNEPYYGNSA---SVKL 312 R + + T P + + S S L Sbjct: 369 MDLTERYSDAEGSTSLGPRLREETKARWLARPRTFRLSTIPRSTQGSDHTYSRRSHSASL 428 Query: 313 LTPTQDSRD---------IINAATRSLDAIWQA--GHRYQKAGVMLGDFFS 352 + + + AT + + G + + + + Sbjct: 429 PQYVFNLDEPIDALAERVVRELATPMFRKLHRERTGWNLRVLNLAVTNMAE 479 >UniRef50_Q2Y5T6 Putative uncharacterized protein n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y5T6_NITMU Length = 506 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 62/390 (15%), Positives = 120/390 (30%), Gaps = 24/390 (6%) Query: 27 VVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMS 86 V V N C+ N A+A GV G P +F +V + + + Sbjct: 30 VTVRKGNQICIQQANKPAQARGVMEGQPLASALAVFPD--LVIMEQDSHEEGKALQQAVY 87 Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 +P + I +++G + V+ L + GIA T T A Sbjct: 88 AALRFTPNIAI-QNSGLIAEVSGSLKLFGGLKKLCQSLNRVVTAQGLQLSAGIAPTATGA 146 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 L +A + G V E R L+ ALPV + + + + +G KT+ DL Sbjct: 147 WLLARSA------SSGTVINGKGEEFRILLDALPVGFLESAQPHL-EVIRGIGCKTLADL 199 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 + + F L + G+ + F + I + + Sbjct: 200 QRLPRSGVARRFGQNLPAELDRAYGDAPDPQKWFEAPED-FQQKMKMMGLIENAGLLLVP 258 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + L H S + ++L +P+ S ++ L + D ++ Sbjct: 259 AQRMVEQMCGWLALRHAAVSAFSFVLHHE-YSLRQPHKFTSINIHLSEQSSDPAHLMLLL 317 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 L+ + + + + + L LF + L ++ +++ G Sbjct: 318 REHLER-TKIVAPVCELELTADEIAAGADGNLELFPTMQS--ETTSLNRFIEKFSSRLGP 374 Query: 387 GTLYFAGQGIQQQWQMKRAMLSPRYTTRSS 416 + + P Y+ R Sbjct: 375 EAITGLKVVSDHR---------PEYSQRLE 395 >UniRef50_C4DV05 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DV05_9ACTO Length = 505 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 51/384 (13%), Positives = 101/384 (26%), Gaps = 26/384 (6%) Query: 16 TVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 + PV V+ + V A +A A+ GV++G + ++ + Sbjct: 17 CRSQGLDETDPVAVVIAHR--VSACSATARRTGVEVGMRRRDAAAVCPDLRLLAADPD-- 72 Query: 76 LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG-REIRATVLQRTHLT 134 A V++ LEEL P V++ G + I + Q L Sbjct: 73 AEAAGFEPVIAALEELVPAVQVLRPGWCGLPAKGPSGWYGDEEAAAETIVEYIAQLCDLE 132 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 VGIA A +A + + + ++ + + G+ + + Sbjct: 133 ARVGIADGFWPASVAAVSGA-----------IVPTGHNAQFLADRNIG-LLGLPP-LVEL 179 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 L +GI T+ A I + V R RG P + + Sbjct: 180 LRRLGINTLGAFAALPRDAIAERLGTVGLRAHARTRGHDERLPAPRTPPVD-LDVFADYD 238 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 E + + A + A + L + C + T+ + +L Sbjct: 239 EPLDRVDTAAFAARTLAEQLRATLAARELACTRLVIEAITAQGTGLRRVW---RHRTVLR 295 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 + + + L + Q L+ Sbjct: 296 ASDVADRVRWQLDGWLTHGG--TGAIVHLRLSPEGIVDASALQDGLWGQMGDGLELADGS 353 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQ 398 + G + + Sbjct: 354 AT--KVQDLFGPEAVLHPVPQGGR 375 >UniRef50_Q9GNC0 DNA polymerase eta n=10 Tax=Drosophila RepID=Q9GNC0_DROME Length = 885 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 67/457 (14%), Positives = 134/457 (29%), Gaps = 88/457 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + L D++ F+ E P+ +P+ V+ G +IA N A+A GV + Sbjct: 17 VVLLVDMDCFFCQVEEKQHPEYRNRPLAVVQYNPWRGGGIIAVNYAARAKGVTRHMRGDE 76 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 KDL + ++ Y D V + L+ + +E S+DEA+ D+T N Sbjct: 77 AKDLCPEIVLCQVPNIREKADTSKYRDAGKEVANVLQRFTQLLERASVDEAYLDITETVN 136 Query: 113 CRDLT----DFGREIRATVLQ-RTHLTVGVGIAQTKTLAKLAN---HAAKKWQRQTGGVV 164 R F + + V +G K + AN + + Sbjct: 137 HRMQQMQSGAFALQPQELVNTFAVGYP-SIGDYVNKITNRFANPYMDDERYQMSYDQNDL 195 Query: 165 DLSNLERQRKLMSA-------LPVDDVWG-----------IGRRISKKLDAMGIKTVLDL 206 R L+ A V G I +++ ++ +T+L L Sbjct: 196 PAVRQSDIRLLIGASVAGEVRAAVKKETGYECSAGIAHNKILAKLAAGMNKPNKQTILPL 255 Query: 207 A--------------------------------------DTDIRFIRKHF-NVVLERTVR 227 +++ F Sbjct: 256 TETASLFDSLPVGKIKGLGGKFGEVVCETLGIKFMGQVVKFSEVDLQRKFDEKNGTWLFN 315 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGER--ITDYPSMRQAICSYAARAAEKLRSEHQYC 285 RG + + I C + F R IT +++ + ++ ++L + Sbjct: 316 ISRGIDLEAVTPRFY-SKSIGCCKKFPGRNNITGLKTLQHWLGELSSEINDRLEKDFIEN 374 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA----IWQAGHR-- 339 + + + ++S D I+ + + A + G Sbjct: 375 NRRA-KHMVVQYVQDIDGEEVASSRSTALRDYDQESIVRLSLDLIKANTKTFLRPGSESA 433 Query: 340 ----YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 + G+ +G F + Q L + A + ++ Sbjct: 434 LNNAIKFLGISVGKFETVSSGQNKLQEMFANQAAKKR 470 >UniRef50_B4S261 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4S261_ALTMD Length = 484 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 65/367 (17%), Positives = 117/367 (31%), Gaps = 22/367 (5%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 PV V S+ +I N AK G+++G + L V N E M Sbjct: 42 PLSTPVAVYSSKASKIIQCNEVAKKEGIEIGHGLAQAAALCPY--VHILPFNEENEKHML 99 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQ 141 ++ L L+ + + + D L + + + + L ++ A Sbjct: 100 TQLAHRLYPLASDIVLDAPDGLAIRLDNLSHYYGGHEALWKTLTQALFEANVRYHFASAW 159 Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK 201 T AK+ K L + ++ + A P+ + ++ + L +GI Sbjct: 160 TIEAAKVL-VLHKHNTY-------LHAQQEIKQALGACPLST-TALASKVIESLTRVGIT 210 Query: 202 TVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 V +L ++ + K F+ + LRGE ++ F P + I + Sbjct: 211 RVHELLAMPVQELGKRFDNNTIVYLTALRGEIFPRVTLFRPLEH-FDNFTLLPFDIENTQ 269 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD 321 + + + LR+ + Y IS I F N S + Sbjct: 270 HLTPFVTQQFEHLSHYLRARNLYTSSISVHIH---FREAPVLDINIRSALPQASVKSWLP 326 Query: 322 IINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 + T +L+ GV F + F D +QL + LN Sbjct: 327 LFTLKTENLE----LPEPATAIGVRCQQFEEIDSNNGDFFSDRFNDVAQKQL---IGRLN 379 Query: 382 AKEGRGT 388 AK G + Sbjct: 380 AKLGDHS 386 >UniRef50_Q2W2X2 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=2 Tax=Magnetospirillum RepID=Q2W2X2_MAGSA Length = 493 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 60/393 (15%), Positives = 117/393 (29%), Gaps = 28/393 (7%) Query: 16 TVFRPDLWGKPVVVLS-NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNY 74 P P+V S V+A N A+ G++ G V + Sbjct: 19 CRSAPAWRDIPLVTASAGPHRQVMAVNRVAQVQGLRPGMKLASALAQVPH--VQIAPHDP 76 Query: 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLT 134 + A + + +P + + D++G + E L+ LT Sbjct: 77 QGDARLLGALAERCTLFTPWCAVEGTAGLWLDISGCGHLFGGETKLLEQLTGRLKGLGLT 136 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 V +A T A L + ++ ++ LP+ + + + Sbjct: 137 VRAALAATPGAAWAWARFG------DATTPILDSPDQ----LAPLPLAALR-LPPATVQT 185 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 L +G++ + DL + F + + G + P SF Sbjct: 186 LSDLGLRRLGDLLGLPRAQVSLRFGREAVWRLDQALGAEPEPISPRRPPAP-YRVHASFA 244 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 + I+ + + +L + Q R + + L G Sbjct: 245 DPISRAEDIAATLDHLLEGLCRRLGLDGQGARRLELTLFRVDGTLARAEIGT------GA 298 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 P++D + L I + G + A + G Q AQ +L QL Sbjct: 299 PSRDPVHLARLFRDRLAEI-RPGFGIEAACLEAGVVQPQAAAQTDLGGAAG----EAQLS 353 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 ++D L+ + G G L + +R++ Sbjct: 354 RLLDALDNRLGPGRLMRLA--PRPSHVPERSVR 384 >UniRef50_C1F5L8 Putative uncharacterized protein n=2 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5L8_ACIC5 Length = 508 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 53/404 (13%), Positives = 117/404 (28%), Gaps = 26/404 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQ 58 ++A V F RP L +P VV+ V + +A+ LG+ G + Sbjct: 7 IYACLCVREFPTQALLRLRPQLRNQPCVVMEGEPPLEQVCSLTRKARILGLLPGMTQVEV 66 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFC---DLTGVRNCRD 115 GV + + S ++ SPRVE S +F D+ G + Sbjct: 67 DTF---SGVTVLQRSRKEEITTSEALLECAGSFSPRVEEVSYRHSFVCVVDIAGTQELFG 123 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + + T + + VG++ + A V + + Sbjct: 124 PPNKLAQNLLTRVSALGIAACVGVSSNFHASIAVARA------PLALSVRVIPPGEEGAA 177 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 ++ALP+ + + + ++ + GI+ + LA R + + + RGE Sbjct: 178 LAALPLTVL-NLSEQQAETFSSWGIRNLGMLAALPERELISRLGQPGKHLRQLARGEAPH 236 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 P + + ++ + + + ++ + Sbjct: 237 LFLPVEPEF-TLHERMELDSPVAVLDALMFVANLMLEQLIVRATARVLALAAVTVALTLE 295 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 A +++ PT D R + + Sbjct: 296 GGASCL------RTIRPALPTND-RPLWIKLLHLDLEAHPPQAAVLAIRLEA---EPGST 345 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +Q+ + + P +L + + + G + A + Sbjct: 346 SQVQMGLFSPQLPEPSRLDVTLARIRSIVGDENVGRAVVADTHR 389 >UniRef50_B7S067 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S067_9GAMM Length = 474 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 49/371 (13%), Positives = 104/371 (28%), Gaps = 20/371 (5%) Query: 28 VVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMST 87 V+ V+ N A ALG++ + L V + A ++ Sbjct: 24 AVVVLAKQRVLRANDYAAALGIREDMGATTVRALLADEPVQLLERDTSAEARCLQQLCCW 83 Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 ++P + + D ++ D + + V G+A T A Sbjct: 84 GYSITPSLHTHGADCLQLEIGSCLALFRGMDLLLAEVSNGIASRGFRVEYGLAPTPGAAW 143 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 L + + + L + L + L G+ T D+ Sbjct: 144 LLSFSE--NDQANDYQRPLQDRLTPLPLSLLSGFNT-------TVDSLRRAGLHTFGDIL 194 Query: 208 DTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAI 267 + + ++++ G+ ++ P FG + + AI Sbjct: 195 SLPPSALGRRCGAEFTGHLQQVLGQRENIHPDYQPPT-NFSDEYWFGYEVRGNEELMPAI 253 Query: 268 CSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAAT 327 LR+ I + +L E +S+S D + Sbjct: 254 QLLLQSLCRFLRNTQLQTAEILWQLVGIDHSLEEIRVRSSSS------HSDWENWYQLTR 307 Query: 328 RSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRG 387 L+ + + ++ S + ++LF E L +++D L + G Sbjct: 308 IRLERLELKV-EVEGLALICDTLNSGQLENIDLFSPRKQ---REPLASLLDRLRNRLGLQ 363 Query: 388 TLYFAGQGIQQ 398 + G + Sbjct: 364 AVKKVGCRNEH 374 >UniRef50_A4AA43 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4AA43_9GAMM Length = 448 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 51/391 (13%), Positives = 104/391 (26%), Gaps = 28/391 (7%) Query: 32 NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL 91 + A NA A LG++ G + L + + E + + Sbjct: 1 MEKQRIYAVNATASLLGLEPGMDPAAARSLAGDSPLQLLPRDPEAETQALESLCCWAYGI 60 Query: 92 SPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 +P + + D ++ G +D L + + + T A ++ Sbjct: 61 TPHLYPFRGDCLMLEIGGSLKLFGGSDAIIRHARQGLAGRGYSADIALGATPLAAWAFSY 120 Query: 152 AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI 211 AA + Q + + LP+ + + + L G KT+ ++ Sbjct: 121 AASDDDAEKDY--------SQSERLHKLPLQTLEPLHEQFVA-LQRSGFKTLGEVLALPA 171 Query: 212 RFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYA 271 + + ++ L GE F P + S G + + + A+ Sbjct: 172 ASLNRRCGAQFRELLQHLSGEVIAPPVHFEPPS-CFVDSYPLGYPVRNQDELGPALEQLL 230 Query: 272 ARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 A + LR R + S + TR Sbjct: 231 ASLDDYLRQRQLQTRQLIWHFSGINNYREVLDVRTSQARTPRQDW-------YRLTRLRL 283 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL-- 389 + + S +LF + + QL +D L+ + G + Sbjct: 284 ERQPFTEEVELVQLRAEQLESAQPTSGDLFRQASQSESTSQL---VDLLSNRLGARAVNS 340 Query: 390 --YFAGQGIQQQWQM----KRAMLSPRYTTR 414 + + L P T + Sbjct: 341 LHHRDAHLPEHSTAETAAGTANALHPADTAQ 371 >UniRef50_B1VF25 Putative DNA polymerase involved in DNA repair n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VF25_CORU7 Length = 556 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 55/436 (12%), Positives = 119/436 (27%), Gaps = 39/436 (8%) Query: 10 FYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVC 69 F + R +P +++ V A NA A+A GV+ G Sbjct: 31 FPVYAVRLARGWDMLRPAATIADYR--VQACNAAARAQGVRQGMKQRHALATCPELRHA- 87 Query: 70 FSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQ 129 ++ A + +++ L +++ VE + N E+ Sbjct: 88 -PADPVQEAAIHEDIVAALMDVAAGVETLRPGLVALPTRPLANYYGGEAAAVELLLDSAA 146 Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR 189 R + G A A A + + L V+ V Sbjct: 147 RLGVECLAGTADDLMPAVWAARRGVHVPPGRNSSFVPTLP------IGFLAVEAVLSAPA 200 Query: 190 RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 + L +G++++ D A + + F R GEP ++ P + + Sbjct: 201 ELVSTLQELGVRSLRDFAALGRKHVAGRFGAEAVYWHRVACGEPGREVSPQRPAQP-VEV 259 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP---FALNEPYYGN 306 E I + AAR +L + C ++ + +P + Sbjct: 260 LHQVEEPIRSTETAAFVARQAAARLHGELFRRGEACLRLTVRVHLNPPAEYTGPTVVERA 319 Query: 307 SASVKLLTPTQDSRDIINAATRSL------------DAIWQAGHRYQKAGVMLGDFFSQG 354 + LT ++ + + + + ++ + G Sbjct: 320 WRCREPLTEEDTAQRVRWQLDGWITRLRAKVGEPEQEGFEDSAAGVVAIELLPVETVPAG 379 Query: 355 VAQLNLFDDNAPRPGSEQL----------MTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 L+ + + M + + + GR + + Sbjct: 380 TIAEPLWGGADEGLRAARAAAGRAQALIGMAAVQQVVHRGGRAIGGRVLTLPYGEEVPE- 438 Query: 405 AMLSPRYTTRSS-DLL 419 +S + TT+ +L Sbjct: 439 -EISAQPTTQWRGELP 453 >UniRef50_A9IPJ8 Putative uncharacterized protein n=4 Tax=Bordetella RepID=A9IPJ8_BORPD Length = 488 Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 42/327 (12%), Positives = 91/327 (27%), Gaps = 12/327 (3%) Query: 73 NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTH 132 + + L + +P + + D + + A L+ Sbjct: 69 DVPAEHRILREAALALLQYTPDIALAEPDAVLLQVDASLAYFGGPRALHKRVAATLRAMG 128 Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 L +G+A T A L A + + + + ALP + R+ Sbjct: 129 LHASLGLAPTAQGAWLLARQAVPRAPR-----RVLQARTLARRLDALPCALLPSAQARL- 182 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 L +G T+ L +++ L R + G+ P + Sbjct: 183 DWLHDIGCHTLGALRRLPRAGLQRRCGTGLVRALDAAYGDAAECHAWIQPPAR-FRQRLE 241 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 + I ++ + + L + + + ++ ++ P S L Sbjct: 242 LPDYIEHADAVLASARRLLEQLCGWLAARQRAVQHLTLVLEHERGRHARPPTVLPLS--L 299 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 P ++ L + + + Q A LF + P Sbjct: 300 AQPAWQQPHLLGLLREKLGRLQLE-APVISLVLRVTGTVEQPAASTCLFPEPGGTPAEHA 358 Query: 373 LMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 ++D L+A+ GR + A + Sbjct: 359 --RLLDLLSARLGRERVLHARPVADHR 383 >UniRef50_B3R9B4 Required for the error-prone processing of DNA lesions along with dnaE2 and imuA n=25 Tax=Burkholderiaceae RepID=B3R9B4_CUPTR Length = 514 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 60/387 (15%), Positives = 111/387 (28%), Gaps = 17/387 (4%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 PV V V+ N A LGV+ G + L +V + A + V Sbjct: 34 PVAV--MAREQVVLANGPAMQLGVRYGMRRGGVQAL--SADIVQLERDPAAEAALMEAVA 89 Query: 86 STLEELSPRVEIYSIDEA---FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 L +P V + EA D++ +++ VG T Sbjct: 90 LALLRFTPGVTVDEEPEAATLMLDVSASLRLFGGHRALCRAVRACVRQLGTVAQVGCGPT 149 Query: 143 KTLAKLANH--AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 A + + + R +L+ LPV+ + + LD +G Sbjct: 150 AHGAAWLARQPLRRTRRGVVRPGRRAVGMARLHRLLDRLPVEALHTL--ADPAWLDGIGC 207 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 +T+ ++ + + L + + GE + F RI Sbjct: 208 RTLGEVRRLPRAGLTRRLGPALLARLDQAYGEAPARFIWFVAPP-AFAQRMDLPGRIESA 266 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSR 320 + A L + ++ + G + L P++D Sbjct: 267 EGVLAGAQRLLLALAGWLAVQQAGVTRCVLVLEHERYRRGAATEGTPVPLGLAQPSRDPA 326 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + LD + + + + LF + P E L ++DTL Sbjct: 327 HLSRLLREKLDKLSF-HAPVTGLALRVEAMAACVPQSDALFPEPGGTP--EDLGRLLDTL 383 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAML 407 A+ GR + + +RA Sbjct: 384 MARLGRDNVLQPRPLADHR--PERANR 408 >UniRef50_Q2SJZ5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SJZ5_HAHCH Length = 432 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 49/366 (13%), Positives = 107/366 (29%), Gaps = 21/366 (5%) Query: 38 IARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEI 97 + N A GV G L V+ S +R S + + Sbjct: 1 MDANTSASRSGVDSGMLLNTAFCLCPALRVLRIKS--YKQTQAIHRTAQVASRFSSWISL 58 Query: 98 YSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ 157 D + ++ ++ R+ +TV A A L Sbjct: 59 DEPDGLYLEVASMKRLYTNPSQLRQAIQQAFSTFKITVLSATAPHPKAAHLLAR------ 112 Query: 158 RQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKH 217 G+ N E + + L +D + + RI KL +G+K++ D+A + Sbjct: 113 ---SGIERDVNAESFWRTLKRLKLDRL-NLESRIEYKLRKVGLKSIYDIAKLPSCDLAYR 168 Query: 218 FNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 +V L + G + F+P + + + + Sbjct: 169 IDVDLALYLDHALGRKPWRPSPFSPPRH-FKKRLDLEQEFESLQPLLFYLAKVVKEFCLF 227 Query: 278 LRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 L+ C+ + + ++ +++L + +SL+ I Sbjct: 228 LQERCLTCQSLEVRL------IHRHQTPTQENIRLAQGDNRPESWLYILNKSLERIELT- 280 Query: 338 HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 + F + LF +E+ +++ L A+ G ++F Sbjct: 281 APVIMIELFASHFEAAPQQSEYLFAHFNENIAAEK-TRLLNRLTARLGSDRVHFLNLTTD 339 Query: 398 QQWQMK 403 + +++ Sbjct: 340 HRPELR 345 >UniRef50_B9NI90 Predicted protein n=36 Tax=cellular organisms RepID=B9NI90_POPTR Length = 628 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 77/220 (35%), Gaps = 18/220 (8%) Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 LAK+ + K + + + L V GIG + ++KL A+GI+TV Sbjct: 2 LLAKIGSELDKPDG------LTILTPADIPTRIWPLAARKVNGIGPKAAEKLAAIGIETV 55 Query: 204 LDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT---D 259 LA+ DI ++ HF G Q+ + + + +F + D Sbjct: 56 GQLAEADIALLQAHFGRNYASWLAEVANGRDERQVV-VSSEPKSMSRETTFERDLHPRGD 114 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 P + + R AE LR + R + ++ F + + + L T D Sbjct: 115 RPVLSEQFTRLCMRVAEDLRRKGYVGRTVGIKLRFDDF------HTVTRDLTLTAHTADG 168 Query: 320 RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 I + AT L I R + GV + + Sbjct: 169 ATIRHGATECLKRIPLE-RRIRLLGVRVSALIPAADQGDD 207 >UniRef50_C1EEZ5 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299 RepID=C1EEZ5_9CHLO Length = 236 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 83/234 (35%), Gaps = 48/234 (20%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E P+ V +IA N A+ GVK + K Sbjct: 10 VVIHLDLDCFYAQVEAKRLGIDPSVPLAV--QQWSGLIAVNYPARHRGVKRHLNVTEAKK 67 Query: 61 LFRRCGVVCFSS--NYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT---------- 108 L V S + Y S RVMS L + VE SIDEA+ D+T Sbjct: 68 LVPELVCVHQSRKVSLRRYRRASWRVMSALADRCEHVERASIDEAYVDVTREVDAAIDGR 127 Query: 109 ----------------------------GVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 IRA VL +T T+ G+A Sbjct: 128 TNAEIDEMVRDGVNASGAVVPLTPSTSEHDMRLAIGAHICAGIRAAVLHQTGFTMSGGVA 187 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 K LAKLA+ K ++ + ++M +LP+ + G+G ++ +K Sbjct: 188 HNKMLAKLASARNKPNKQ------TAVSARAVTEMMESLPMRSIKGLGGKLGEK 235 >UniRef50_D1X5H2 DNA-directed DNA polymerase n=1 Tax=Streptomyces sp. ACT-1 RepID=D1X5H2_9ACTO Length = 337 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 52/321 (16%), Positives = 104/321 (32%), Gaps = 16/321 (4%) Query: 83 RVMSTLEELSPRVEIYSIDE-AFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGI 139 ++++ L+ +S RVE D A+ DLTG D +R +L + G Sbjct: 29 QLLAVLDSISSRVEPLPADWSAYVDLTGALTYWGRDAEGLVAVLRLRLLALHGVQCSAGA 88 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 T+++A +A G + + P + GIG R ++ L G Sbjct: 89 GPTRSIAAMAADVTPPGAATVVG----HDPYEVSAFLRTRPASALPGIGPRTARTLARYG 144 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERT-VRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 I +V D+ADT + +++ R + A + + S F Sbjct: 145 ITSVGDIADTQLPTLQRILGASAARLAHDRAHNIDERPVVPGAAPR-TVSASHRFDRDEL 203 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 D +A+ +LR+ + R ++ + + + + L PT Sbjct: 204 DTERHHRAVLGLVQDLGSRLRTGREIARALTLTVTYAD------RSQTARTRALAEPTAH 257 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 + + A L + R + + L + ++ +D Sbjct: 258 TPALAATARALLTGLGLQRARVRALALRAERLRPAEDTVHQL-TLDDRDDRLRRIEAALD 316 Query: 379 TLNAKEGRGTLYFAGQGIQQQ 399 + G G A ++ + Sbjct: 317 QAATRYGTGVAGAASTFLRAR 337 >UniRef50_D2LKT9 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=2 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKT9_RHOVA Length = 180 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 76/148 (51%), Positives = 98/148 (66%), Gaps = 1/148 (0%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N+FY SCE VF P L +PVVVLSNNDGC+IA E+KALG KMGDP+ ++ Sbjct: 3 VFALADCNSFYCSCERVFEPKLETRPVVVLSNNDGCIIALTTESKALGFKMGDPYHLKRA 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 +R V +SSNY LY DMS RVM+ L +P +E+YSIDEAF +L G R LT + Sbjct: 63 DLQRRKVAVYSSNYTLYGDMSRRVMTVLTRFTPELEVYSIDEAFLNLAGFEG-RGLTGYA 121 Query: 121 REIRATVLQRTHLTVGVGIAQTKTLAKL 148 R IR+TV Q T + V +G+ + L + Sbjct: 122 RTIRSTVRQETGIPVSIGVNRDPELPRF 149 >UniRef50_UPI0001745839 nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745839 Length = 525 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 59/376 (15%), Positives = 113/376 (30%), Gaps = 24/376 (6%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 G P+ CV+ NA+A+ L V G + + + Sbjct: 60 GTPLA---REQACVLQVNAQAERLLVHPGMTASMARARC--ATLQFLYRDAGAELAAQEV 114 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 ++ +P E S DL+ + + L R+ LT VG A+ Sbjct: 115 LLQCSSNRTPFYESTSPGLCVLDLSSLPGVKGAELAYGRAICEELARSKLTARVGFARRA 174 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 LA LA H A + + E R + ALP++ + + ++ G+KTV Sbjct: 175 DLAILAAHTAAP-------IRVMLGEEVDRACLGALPLEVL-QPAWQTAEVFALWGVKTV 226 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 DL + + G L+ P F I + Sbjct: 227 GDLCKLPRAGVTERLGREGMLLWDLATGGRDRLLKLVRPVP-GYRVEEDFEHSIECLEPL 285 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII 323 + + ++L + + + + + +++ PT+D + Sbjct: 286 LFILRRHLQSLCDRLGATWRVAAAAVVELHFEDGSRHL------RELRIAEPTRDVELLF 339 Query: 324 NAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 +L+ + A + + G L LF+ P + + L A Sbjct: 340 RVIHTALEGVS-AAAPIRGVVLEFRAVTPAGSQSL-LFERTLKDPN--RFAETLAHLEAV 395 Query: 384 EGRGTLYFAGQGIQQQ 399 G G + ++ Sbjct: 396 VGSGNVGRVRLLPSRR 411 >UniRef50_D0XS46 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=3 Tax=Alphaproteobacteria RepID=D0XS46_9CAUL Length = 476 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 50/372 (13%), Positives = 103/372 (27%), Gaps = 21/372 (5%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV 95 + A + A LG+ G + V + E A + RV+ +P + Sbjct: 10 RLAAVDPAAARLGLSPGMTLADARARTPDLRTVAD--DPEADATLLRRVLKDFGRFTPLI 67 Query: 96 EIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 + D+TG + L++ +A T A+ Sbjct: 68 ALDPPHGLMLDITGCAHLFGDEAGLIRSAQRRATGGGLSLRWALADTPQSARALARFG-P 126 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 G R + L V + + + L G+K + DL D + Sbjct: 127 GGLFAGP--------ETRTAVRRLSVAALE-LAEPDERALRRAGLKRLSDLDDRPRAPMA 177 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 F + + G+ +++ P + R E I + + A A Sbjct: 178 ARFGTDFPARLARVLGDEDVRITPHRPVPACV-VDRILVEPIVTQDDVERVFQDLLADAV 236 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 ++L Q R F + + + + + +L Sbjct: 237 DQLDQRGQGGRAFEVFFYRLDGHVRRVSI---RTGQPSRDPAALQRLFRERLGALAHPLD 293 Query: 336 AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 G + + + + Q ++ + E + ++D L A+ G + Sbjct: 294 PGFGFDQMRLAVPWTEPIAPTQDSMEGERPGT---EHVSHLIDRLAARLGPDAVLCFQPF 350 Query: 396 IQQQWQMKRAML 407 +RA Sbjct: 351 --GSHMPERASR 360 >UniRef50_UPI0000D878BE hypothetical protein CIMG_06713 n=1 Tax=Coccidioides immitis RS RepID=UPI0000D878BE Length = 1404 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 64/440 (14%), Positives = 130/440 (29%), Gaps = 85/440 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CE V +P+ V +IA N A+ + + K Sbjct: 55 VVAHIDLDAFYAQCEMVRLNTPRTQPLAV--QQWESLIAVNYAARPFNISRMITAKEAKA 112 Query: 61 LFR------------------------RCGVVCFSSNYELYADMSNRVM--------STL 88 V + + Y S +++ + Sbjct: 113 RCPQLMTVHVATFREGEGGKWAYREDGDHNVATDKVSLDPYRAESRKILGTIKDGLVAWA 172 Query: 89 EELSP-------------------------RVEIYSIDEAFCDLTGVRNCRDLTDFGREI 123 E++ P R+E IDE F DL+ + L + Sbjct: 173 EKVDPCGLGERRTESGGSVKEKEKDWTNMVRIEKAGIDEVFIDLSALVWATLLERYPMLQ 232 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ----TGGVVDLSNLERQRKLMSAL 179 V + + A K+ + D + + L+ A Sbjct: 233 EMEVKREMSERL-------PRPPTTALDWGKEDELVDLDEGETEEDDPDWDDVVMLVGAD 285 Query: 180 PVDDVWG-IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQL 237 V + G +G++I+ + + V +L + + + +RG ++ Sbjct: 286 IVRMLGGKLGKQIASTFET---EQVDELLRVPLEQFKAKLDDDTGMWLYELIRGNDWSEV 342 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297 + +I ++SF I + + +AA +L E + + Sbjct: 343 NP-RTQIKSMISTKSFRPGINSLEQAEKWLRIFAAEIYGRLVEEGV----LEHKRRPKVL 397 Query: 298 ALNEPYYGNSASVKLLTPTQ---DSRDIINAATRSLDAIWQAGH--RYQKAGVMLGDFFS 352 ++ + G++ S ++ PT D + A L + GH + + F Sbjct: 398 TIHHRHSGHTKSRQVPIPTGMAIDEEPLFALAKDLLKQVTNEGHMWPCMNLALTVSGFED 457 Query: 353 QGVAQLNLFDDNAPRPGSEQ 372 +L +E+ Sbjct: 458 GVSGNQSLDSFFTRATDTER 477 >UniRef50_A0Z5A6 Aspartate decarboxylase n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z5A6_9GAMM Length = 479 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 54/375 (14%), Positives = 122/375 (32%), Gaps = 25/375 (6%) Query: 19 RPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA 78 +P P VV+ VIA N EA+ G+K G + L + + Sbjct: 17 QPLQQDYPAVVI--ERQRVIAVNDEAQLTGLKPGQSTATVRALVDTSQLQLLERDASQEV 74 Query: 79 DMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVG 138 R+ ++P +E + + ++ + L++ TV G Sbjct: 75 LALERLECWAYSITPTLERWQNEGLQLEVGRCLKLYGGLTKLFNNIQSDLEQRGFTVRSG 134 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI----SKK 194 +A ++ A L +H + + R+ + +P+ + K Sbjct: 135 LAPNRSAAWLLSHW--------DENFLYPSDQNLRQRLDEIPLHLLRKAQAGQFLNAIKS 186 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 L+ GI+T+ ++ + + + ++ + ++ ++F P + FG Sbjct: 187 LEKTGIQTLGEILNMPASALGRRCGQAFQKWLGDVTATSDNVTQDFHPPHR-FYDCLWFG 245 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 I + + + A R+ I + + +S + Sbjct: 246 FEIRNQTELHPTMQQLLHALARFCRTTQHQPTHIEWQMLRMHGDTDLFEVRSSEA----- 300 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 D +I +R + G + + + F +Q +LF ++ E L Sbjct: 301 --HDDPEIWFELSRLSLEQYSLGADIEGLALHVHQFQTQNAIVTDLFGES---HNREPLH 355 Query: 375 TVMDTLNAKEGRGTL 389 ++D L ++ G + Sbjct: 356 NLVDRLRSRLGLQAI 370 >UniRef50_Q38C71 DNA polymerase eta, putative n=4 Tax=Trypanosoma RepID=Q38C71_9TRYP Length = 525 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 61/429 (14%), Positives = 121/429 (28%), Gaps = 96/429 (22%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D++ FYA E V D +P V+ + G +IA N A+ G+ D + Sbjct: 4 IAHIDMDCFYAQVEAVRLGVDCRTEPYVL--SQWGNLIAVNYPARKFGIGRFDTVTDALE 61 Query: 61 LFRRCGV---------------------VCFSSNYELYADMSNRVMSTLEELSPR-VEIY 98 + E Y + S ++ L+ VE Sbjct: 62 KCPHVKISHVATYAAGEVEYRYHENPSKQTHKVALEPYREASRKIFRILDSFDGVEVEKG 121 Query: 99 SIDEAFCDLTGVRNCRDLT----------------------------DFGREIRAT---- 126 S+DEAF D+T + + + ++ Sbjct: 122 SVDEAFLDVTKAAHMKQGEMGLLSSQGELRLEDVADPTTIVIPSRQAEIAAWLKEHGREF 181 Query: 127 --VLQRTHLTVGVGIAQTKTLA-----------------KLANHAAKKW--------QRQ 159 V T + A + R Sbjct: 182 SDVFDVTLHPQPTAENMSLLAAASRVVWTIRQKIYDELRYDCSAGIAHNKLLAKSISARH 241 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK--KLDAMGIKTVLDLADTDIRFIRKH 217 L + +M LP + G G + + +L G +T + + + K Sbjct: 242 KPNQQTLLFPDCVASVMWDLPFKSIRGFGGKFGEVVRLACGGKETCREAWLHSLCAMSKF 301 Query: 218 FNVVL--ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 F V E R LRG ++ E + ++ S++F + +++ + + + Sbjct: 302 FESVGDAEYAYRRLRGYDEGKIRE-RSISKSLMASKAFSPPSSTANGVQKWVTVLSGELS 360 Query: 276 EKLRS----EHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 + + + L++P + + L + +++AA + + Sbjct: 361 ARYEDFCNTYGVKGHSFNVKLG--NRGLDQPSSVANKTFPLPELV-TPQTLVSAAMQCVT 417 Query: 332 AIWQAGHRY 340 AI Sbjct: 418 AIMANRPGV 426 >UniRef50_C7YPE8 Putative uncharacterized protein n=2 Tax=Nectriaceae RepID=C7YPE8_NECH7 Length = 564 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 58/400 (14%), Positives = 111/400 (27%), Gaps = 98/400 (24%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D + FYA P L PV V C+ N A+ALG+K + K L Sbjct: 22 DYDCFYAQVFENKNPALKKLPVGV--KQKNCLSTCNYNARALGLKKLMSVSEAKRLCPEL 79 Query: 66 GVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDLTGVRNCR--------- 114 ++ + + D S + + + + +VE DE F D+T + Sbjct: 80 VLMDGE-DLTPFRDTSKILFNYFKTFSWNHKVERLGFDEVFMDVTDIVEYNLLCLNKASL 138 Query: 115 ------------------DLTDFGREI----------------------------RATVL 128 DLT + R + Sbjct: 139 ADSFFCLSKQDPERGFQCDLTSIAGCVQDTASQDLDTESPAYLRLLLGSHFAQFLRLQIE 198 Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG 188 ++ T GIA K L+KL K + T + + + + + G+G Sbjct: 199 EKFGFTSTCGIATNKMLSKLVGGNNKPRNQTTLLALT---QDEAIAFLDDHKLRKIPGLG 255 Query: 189 RRISKKLDAM-GIK----------------TVLDLA---DTDIRFIRKHF------NVVL 222 +I + L G TV + + I V Sbjct: 256 FKIVEVLGGHVGADMSAAMPEMPEMRDVPVTVGQVRLHPNISPGIIETLLMGPGAEKGVG 315 Query: 223 ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH 282 R L G +++E + +I ++ + + P + + + + ++R Sbjct: 316 SRIWGLLHGVDPTEVKEASDMPSQISIEDTY-KGLETVPQITEELHKLSCSLVRRMR--- 371 Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + + + + L + + Sbjct: 372 -----VDLLVPDQNSDVPGSQRWIARPKTLRLSVRSWAQL 406 >UniRef50_A4JFF8 Putative uncharacterized protein n=2 Tax=Burkholderia RepID=A4JFF8_BURVG Length = 521 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 47/370 (12%), Positives = 101/370 (27%), Gaps = 14/370 (3%) Query: 35 GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR 94 G VIA A+ GV++G + V + + + +P Sbjct: 10 GQVIALTRAAREAGVRLGMRRAGALAIAPD--VQLSGRDPAKEVEALGAAALAMLRFTPS 67 Query: 95 VEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 V D +++ + L +A T + A L Sbjct: 68 VARMGDDALVLEVSSSLRLFGGVRAILRQARQAIADLGLNARFSLAPTASGAWLLAR--- 124 Query: 155 KWQRQTGGVV--DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR 212 G ++ L + + LP + +R++ +D +G K++ DL Sbjct: 125 PPGSGHVGGFRRRVAKLSTLSRCLDRLPFGLLPE-SQRMAAWIDGIGCKSLGDLRRLPRA 183 Query: 213 FIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAA 272 +++ L + GE E +R+ ++ A Sbjct: 184 GLKRRCGPGLLDAMDRAYGEAAESFEWEIAPA-TFDAKVELPDRVEHAEALLFAGRRLIV 242 Query: 273 RAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 + L ++H + + + L T D + L Sbjct: 243 QLTGWLAAQHLAVSRFALLLDHERGRAAIEPTRLD--IALADATGDPEHLARLLKERLGR 300 Query: 333 IWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFA 392 + ++ + + +LF D A G +++ L A+ G + Sbjct: 301 LALL-APVIAVRLLADETRERPGVSDSLFPDPAAAEG--DFAQLVELLTARLGAENVLQP 357 Query: 393 GQGIQQQWQM 402 + + Sbjct: 358 ALAPDHRPER 367 >UniRef50_C8NM76 Polymerase involved in DNA repair n=15 Tax=Corynebacterium RepID=C8NM76_COREF Length = 796 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 47/392 (11%), Positives = 115/392 (29%), Gaps = 21/392 (5%) Query: 17 VFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYEL 76 P P+ + ++ + A A+ GV+ G + + + V+ ++ E Sbjct: 33 RDDPAPADDPLAIAEHHR--IRACGLAARRRGVRRGMKVRQARAVCPDLEVI--DADPER 88 Query: 77 YADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVG 136 A M V+++L E++ VE+ + ++ RT + + Sbjct: 89 DARMFEGVIASLGEVASSVEVLRPGLVIIAADAAARYHGSEEVAAQLLIDAASRTGVDII 148 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV-----WGIGRRI 191 G+A T A +A + ++ P+ + G ++ Sbjct: 149 AGVADEVTTAVIAT---------RVVGGGVVRSGASTSFLAQQPLGVLVAEEALGCDGQV 199 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 + L +GI T+ +LA + + F R ++ S Sbjct: 200 VQALQDLGITTLGELAALPVGSVATRFGQAGLRCHAIATARHGRRVAPPIDGA-NWEVSH 258 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 E IT + + A + +L C+ + + + + S + Sbjct: 259 ISEEPITRVDAAAFRARALAVQLHARLAEAGVVCQVLRVTADFTDGTTSSRVWRTSEPLT 318 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 R ++ + + + + + +A L+D Sbjct: 319 EGATADRVRWQLDGWLTARGVVEETDGGITALWLTPLECVPPEMASEGLWDTGTSHRAVA 378 Query: 372 QLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 + V++ + + G + + + Sbjct: 379 R--QVVERVQSTLGITAVLQPVPAGGRGVAER 408 >UniRef50_A7BC74 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BC74_9ACTO Length = 517 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 44/404 (10%), Positives = 105/404 (25%), Gaps = 38/404 (9%) Query: 28 VVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMST 87 V+ + V + A++ GV+ G + + ++C + + A + V+ Sbjct: 24 AVVHSERIEV--ASGAARSAGVRSGMSVREAMYVCPD--LICLPRDPDREARAFSAVVDA 79 Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGR-EIRATVLQRTHLTVGVGIAQTKTLA 146 + ++ VE A C G + + + + + + VGIA + Sbjct: 80 FDSVAAGVECVRPGVARCRARGPARWHGSEEAAALALVSAIEEAVGVECFVGIADGPVAS 139 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD-VWGIGRRISKK-------LDAM 198 A + + + +P+ +W + ++ + L + Sbjct: 140 LEAAREG-----------RIVPAGENQLFLGRIPLHRALWAVPVAMTDRAADAIELLTGL 188 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 G+ T D + + F V E+ G L + +I Sbjct: 189 GVHTCADFLALGRGRVCERFGDVGEQLWNLASG-GDSALTPAGRIQPDITMECVIDVGGD 247 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 +M I A +++L + + ++ + + D Sbjct: 248 SINTMIVPIQRIARDLSQRLGRGGLVSQTLRIDVEDAGGGQRTRTWSG-----CDVCVSD 302 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 + T + G A + + + + Sbjct: 303 EVALRVRWTLAGWTSGIEGPS--GAVTCIRVTACDPRVGRSASALWGRSDRERDVSRSVV 360 Query: 379 TLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 + G +L S TR ++ Sbjct: 361 RIQGMAGPDSLLIPRVQGGYDP------RSRVVMTRWGSKPLLR 398 >UniRef50_C0G3K2 Cytoplasmic protein n=39 Tax=Rhizobiales RepID=C0G3K2_9RHIZ Length = 513 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 58/386 (15%), Positives = 108/386 (27%), Gaps = 29/386 (7%) Query: 26 PVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P+VV + A + EA LG+ G + R V + + + R Sbjct: 28 PLVVTERTANALRLTAVDGEAAKLGLFPGMALTDARARVERLDVAAAAPEH--DTALLKR 85 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + E +P V D+TG + R +R L V IA Sbjct: 86 LAQWCERYTPLVAFDEPHGLMLDITGCAHLFGGPAAMRADALCRFERAGLHVQAAIADNS 145 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 A+L K + + +L+ LP+ + + + L G+K + Sbjct: 146 FAARLLARGTK---------GGVFSQAEADRLLPRLPLSALE-LAQAAETGLKRAGLKRI 195 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 D+ + F L + L + R E +T + Sbjct: 196 GDVMALPRSALTARFGTDLATRLDRLARRERAPISP-LRILPLRTVERRLSEPVTAMELV 254 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII 323 + A +L E + + + P +D R + Sbjct: 255 EHILRELAQALFAQLEMEGKGALLLEASFFRVDGEVRHIRIET------GQPLRDDRIFL 308 Query: 324 NAATRSLDAIWQA---GHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 A L A+ G + + + Q L + ++D L Sbjct: 309 RLARERLGALTDPLDAGFGFDMIRLAALRSSTVAQRQTGL---DQHEEDEAGFSQLIDRL 365 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAM 406 +A+ G+ + + +RA Sbjct: 366 SARLGQDRVL--VSFPRDTHMPERAY 389 >UniRef50_Q0V979 Zgc:136881 n=6 Tax=Eumetazoa RepID=Q0V979_DANRE Length = 294 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 54/218 (24%), Positives = 82/218 (37%), Gaps = 10/218 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + AL D++ FY E +P+L KP VV G +IA + EA+A GV Sbjct: 8 VVALVDMDCFYVQVEQRLKPELKNKPCVVAQYKTWKGGGIIAVSYEARAHGVGRNMFADD 67 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + L V ++ Y + S V+ + +E SIDEA+ DLT Sbjct: 68 ARKLCPDLQVARVPEAHGKADLTHYREASVEVIEVMSRF-AVIERASIDEAYMDLTASVQ 126 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQ-RQTGGVVDLSNLER 171 R ++I A L+ TH+ + L + A AA Q S+ Sbjct: 127 ERLKNTSVQDITAQQLKNTHIQGFPTQQENTHLDRDAQRAAGLQQWLDLLSSSTESSPAD 186 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT 209 R + AL V+ + + + GI LA Sbjct: 187 LRLAVGALIVEQMRAAVEEHTGFRCSAGISHNKVLAKL 224 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%) Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 ++RA V + T GI+ K LAKLA K ++ + L Sbjct: 187 LRLAVGALIVEQMRAAVEEHTGFRCSAGISHNKVLAKLACGLNKPNRQ------TVLPLS 240 Query: 171 RQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFN 219 +L S LP+ + +G ++ + + + ++ + DL + +HF Sbjct: 241 SVPQLFSTLPISKIRNLGGKLGSSITETLSVENMGDLTRFSRAQLEQHFG 290 >UniRef50_C6QBZ4 Putative uncharacterized protein n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QBZ4_9RHIZ Length = 497 Score = 126 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 53/395 (13%), Positives = 114/395 (28%), Gaps = 23/395 (5%) Query: 16 TVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 P V ++ G + A +A A A G++ G + R V ++ Sbjct: 10 QRETGSGTDLPRVFVAKVKGVSQLSAVDARALAAGLRTGMALADARARLPRLHAVA--AD 67 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 + +P V + + D+TG + L + Sbjct: 68 PSADGAFIAHLGDLALAFTPSVALDPPNGLALDITGCSHLFAGEAMLAARLQKALCAAGV 127 Query: 134 TV-GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 +V + +A T +A+ + L+ LPV + + Sbjct: 128 SVVRLAVAPTPDMARALARFSPANPCF----------AEDDALVRGLPVAALE-CAEDDA 176 Query: 193 KKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRS 252 L G+KT+ ++AD F + + GE ++ + + Sbjct: 177 TALRRAGLKTIAEIADRPSLLFTARFTSAFTAKLARILGEEDNRITPRGR-RVRYRAEQR 235 Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 E + + + + + E+L R + + + S Sbjct: 236 CAEPVASHDVIARLLSDLVVSVCEQLGERSVGGRIFTGIFMRADGVVRRIRVETS----- 290 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 PT++ I+ L+A+ V+ + + NA ++ Sbjct: 291 -QPTRNPDVILRLYRDRLEALADPLDPGFGFDVICFEAIRVEPWIESQGTFNAQDDQKDK 349 Query: 373 LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + ++D L+ GR + + + ML Sbjct: 350 VAQLVDRLSTMFGRERVMRLHPLDSHVPERAQTML 384 >UniRef50_C7CFB9 Putative DNA-directed DNA polymerase n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CFB9_METED Length = 398 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 80/206 (38%), Positives = 115/206 (55%), Gaps = 1/206 (0%) Query: 115 DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRK 174 R++R TV RT ++ VGI TKTLAKLANH AKK GGV DL++ + Sbjct: 14 GPVTLCRDMRETVRARTGISTCVGIGATKTLAKLANHVAKKVPE-LGGVCDLTDPIQYGH 72 Query: 175 LMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 M+ +P +D+WGIG ++KL+A+G ++V D+ D D R +RK VV ER V+ELRG C Sbjct: 73 WMARIPPEDIWGIGPANARKLEALGCESVADVRDLDTRAVRKAMTVVGERLVQELRGLAC 132 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 L LEE A ++ +RSF + + D +M QA+ ++AA+ EKLR ++ F T Sbjct: 133 LDLEEVASARKGCAVTRSFSDGVEDLATMEQAVATHAAQLGEKLRGGGLATDHVTVFFHT 192 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSR 320 S + P S+ V L + Sbjct: 193 SEHERDRPQRSVSSVVTLARGQRRHA 218 >UniRef50_A4AKV5 Putative uncharacterized protein n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AKV5_9ACTN Length = 494 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 56/396 (14%), Positives = 115/396 (29%), Gaps = 22/396 (5%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 P V+ G V A +A A+A G+ G + + F G++ + + L + Sbjct: 2 DVPFVL--TEKGLVFAASASARAEGISRGLRLREAQSRFP--GLIDRAYDPALDSRAFEP 57 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-DFGREIRATVLQRTHLTVGVGIAQT 142 V++ +EEL P V++ + G + V + VG+A Sbjct: 58 VIAGIEELIPGVQLLRPGMCAVRVRGAAQYYGGEKAAALTVIDRVNEIVASDARVGVADA 117 Query: 143 KTLAKLANHAAKK-WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK 201 A A+ + Q + + ++ L + + +I L +GI Sbjct: 118 LFTAVHASRSTVGVDQVSRSARARIIPAGESAQFLAPLAISVLD--EPQIVTLLIKLGIS 175 Query: 202 TVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 T+ + A +R F + R G P + F + Sbjct: 176 TLGEFAQLAHADVRTRFGDLGARLHALASGRDPQAFIARTPPLD-LDVVIDFEPALDRVD 234 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD 321 + + S A E L I + + + E + + S T Sbjct: 235 QITFGVRSRADDFIEGLVRAQLVVTAIRIELDSESGEIAERVWLHPRSF---AATDVVDR 291 Query: 322 IINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 + S + ++ + G + L+ ++ + + Sbjct: 292 VRWQVQGSNLIEAGLSSGISRVRIVPETVDAIGNHETGLWGSGLEP----RIHHGLARVQ 347 Query: 382 AKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 + G G + + Q ++ T D Sbjct: 348 SMLGHGGVLVPTVQGGRTLQSRQQ------LTAWGD 377 >UniRef50_B6R5I9 Protein ImuB n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R5I9_9RHOB Length = 442 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 109/346 (31%), Gaps = 24/346 (6%) Query: 78 ADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGV 137 + + + +P V + D D++G + + L+ V Sbjct: 12 ESLLAALADWCDRYTPLVAVVGDDTLLLDISGCAHLFGGEKAMLDDCLNRLKLQGFHVSG 71 Query: 138 GIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA 197 +A T A + + QR + L ++ + + I L Sbjct: 72 AVADTVGAAWAVARS----------DGGVIAPREQRDALEPLSIELLR-VEENIVTSLMR 120 Query: 198 MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 +G+ + DL D + F L R + + G + ++ R F E I Sbjct: 121 VGLTVIGDLLDRPRAPLANRFGEDLVRRLDQALGMEGEPISPRLY-TPALVVERRFFEPI 179 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + I S + ++L + R + +N G S ++ Sbjct: 180 AREDDVVAVIQSLSENLQKELEKRQEGGRAFELVLFRVDGVVNRLAVGTSGPIRAPNLV- 238 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVM 377 + +++ AG Y + + + AQLNL ++ + L ++ Sbjct: 239 --LQLFRERLKTVGDELDAGFGYDLIRLAVLEAQCCSAAQLNLEGNS---HHEDDLAELV 293 Query: 378 DTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR-----SSDL 418 D L A+ G + + ++ ++ L P T R +D+ Sbjct: 294 DRLGARLGLAQVSRFLPCDEHLPEV-QSALVPAATVRENALYWADV 338 >UniRef50_D2DXS2 Nucleotidyltransferase/DNA polymerase n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXS2_9BACT Length = 493 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 59/414 (14%), Positives = 112/414 (27%), Gaps = 20/414 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN-DGCVIARNAEAKALGVKMGDPWFKQK 59 MFA V F C P+L + + ++ N V A+ GV +G + Sbjct: 1 MFAAIYVPDFALQCVLRRDPELRDRLLAIVDGNLPARVRQMTPVARDHGVTVGMTTTQAL 60 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 L S ++ E SP +E + G R + Sbjct: 61 GRSPTLLFRTA----GLLDAESACLLQCAETFSPWLEATGEGVVTIEWRGDAENRSSVEA 116 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN-LERQRKLMSA 178 E L T +G+A T LA LA H A + V LS +A Sbjct: 117 VAESIVRQLAALAFTARIGLAATPALALLAAHCASPVRIVERAVDFLSPLPLETLSADAA 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + D+V + L G+ T+ + A + G L Sbjct: 177 MCSDEVQAAREEAFRLLHRWGLHTLGEFAALPREQVVARLGGEAAELWDRAAGRAGRPLR 236 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + + + + + + A +L + ++ + + + A Sbjct: 237 LVRAPE-IFAEAMELEHEVETLEPLLFILRRFLEQLAARLTAAYRVAATLELRLGFAAGA 295 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + ++ PT D + L+ I + Sbjct: 296 PHA------HEFRIPAPTCDVEVLFRIVETHLETIRAE-APIIAVELRAR---PTRAEHK 345 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML-SPRY 411 + + + L A G + + ++ L +P + Sbjct: 346 QFGLFESGLRDPNKFFETLARLQALLGNDRI--GTPVAEDTYRPDAFHLETPSF 397 >UniRef50_UPI0001AEC5B6 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC5B6 Length = 495 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 59/384 (15%), Positives = 111/384 (28%), Gaps = 28/384 (7%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 PV V + + N AK G+++G + L V + E M + Sbjct: 45 NTPVAVYCSKTNKITQCNDIAKKEGIEIGHGLAQAAALCPY--VHILPFSEEAEKHMLTQ 102 Query: 84 VMSTLEELSPRVEIY------SIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGV 137 + L L+ + + S L + + + L + Sbjct: 103 LAHRLYPLASDIVLDNHIHSNSFSGLAVRLDNLTHYYGGHKPLWKTLTQALAEADIRYHF 162 Query: 138 GIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA 197 A T AK+ K L + +K +S P+ + + ++ L Sbjct: 163 ASAWTIEAAKVLA-LHKFNTH-------LHTPDDIKKALSTCPLS-ITALSPKVIDSLAR 213 Query: 198 MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 +G+ V L ++ + + F+ + LRGE ++ F P + I Sbjct: 214 VGVSCVQQLLAMPVQELGRRFDNNTIMYLTALRGETFPRVTLFRPLEH-FDNFILLPFDI 272 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + + + + LR+ + Y IS I F N S + Q Sbjct: 273 ENTQHLTPFVTQQFEHLSHYLRARNLYTSSISVHIH---FREAPVMDINIRSALPQSSVQ 329 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVM 377 + + F + F D +QL + Sbjct: 330 SWLPLF----SLKTENLVLPEPATAIALTCQQFEEMDTQNGDFFSDRFNDIAQKQL---I 382 Query: 378 DTLNAKEGRGTLYFAGQGIQQQWQ 401 LNAK G + + Q++ Sbjct: 383 GRLNAKLGDNSTFQPRAADSHQFE 406 >UniRef50_Q5QUT8 Homolog of DinP DNA polymerase involved in DNA repair n=1 Tax=Idiomarina loihiensis RepID=Q5QUT8_IDILO Length = 467 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 48/387 (12%), Positives = 118/387 (30%), Gaps = 25/387 (6%) Query: 17 VFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNY 74 +PD P+ + N ++ N A+ GVK L + +V Sbjct: 17 RLQPDSNTLPLALYQLQGNQSVIVQCNTLAREAGVKPSIQTVMAISLCEQLQLV--EYIP 74 Query: 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLT 134 E + ++ + L + + ++ +Y +L+ + D + + + Sbjct: 75 EREQQVLQQLATRLYQWAAKLVLYPPKGLAIELSSLAQLYGGMDAVFNTLSREVDALPIK 134 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 + +A A+L N + +L++ LP+ G+G + K Sbjct: 135 AQLAVADNPLAAQLLAEYDCP---------VSLNRKESAQLLAQLPIGAA-GLGTKTQKH 184 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 A G + + +L + + + + + ++G F P + S Sbjct: 185 CKAAGFRQLGELIQLSGDEVGRQLGLETQLYLERIQGRQQQSYNFFTPPE-SFRQSLDLV 243 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 I + + + + L + + +S + + + V L Sbjct: 244 TEIPHWQGLLFPLKRLFGELEDFLYQRQKVTQQVSIELH------HRYEPPSVVPVALAE 297 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 P + ++ +++I + ++ + + F R + QL Sbjct: 298 PGWRGQSFLSLLQLKMESIPLP-EAVIEITLVANELLQSEQHNSHFFGVQQHRHETLQL- 355 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 + L AK G ++ + Sbjct: 356 --IGRLQAKLGNNAVFSPAMNDDPRPG 380 >UniRef50_B1ZZZ2 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZZ2_OPITP Length = 526 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 59/423 (13%), Positives = 115/423 (27%), Gaps = 49/423 (11%) Query: 10 FYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 F +L G+PV +L ++A EA+A GV+ G + G+ Sbjct: 10 FALQAVLRLERELVGRPVGLLDETLRPPAIVACTPEARASGVEAGLTAAQAMARC--AGI 67 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATV 127 ++N + +++ +SP VE + + G+ R + + Sbjct: 68 TLRNANPAAETEARAALLAAAFSISPHVEDTAPGVGTMQVGGLAEERRVPALHAAVTQ-- 125 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN------------------- 168 L L G+A T LA A + +S Sbjct: 126 LHGLGLVATAGLAATPLLALYAARFGQYHNSAARVGRGVSPSRELQRLAEDGSPYLLGGS 185 Query: 169 ------------LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRK 216 +R + LP+ + ++ L GI+T+ +L + + Sbjct: 186 GLPLRNEIVHLAPGTERMFLRDLPLAVAEPL-PETAEILAGWGIRTLGELTALTKADVTQ 244 Query: 217 HFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 GE L Q + + + + + R A Sbjct: 245 RLGPAGLALWERAAGEVTRPL-RLIAPTQRFAAELTLEHEVETLEPLLFVLRRFIDRLAL 303 Query: 277 KLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA 336 +LR+ ++ + S + +L PT + L+ + A Sbjct: 304 ELRNAGFVAGELTLTLSLSDETAHA------RDFRLPEPTAQEEILFRVLHTHLETLHTA 357 Query: 337 GHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 + + Q LFD P + + A G + Sbjct: 358 -ATVRGLRLECRPVRPLT-RQHGLFDSALRDP--HGFAETLGRVAAVVGADRIGTPVVAD 413 Query: 397 QQQ 399 + Sbjct: 414 THR 416 >UniRef50_D2LC32 Putative uncharacterized protein n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LC32_RHOVA Length = 648 Score = 124 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 57/426 (13%), Positives = 124/426 (29%), Gaps = 38/426 (8%) Query: 3 ALCDVNAFYASCETVFRPDL--WGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQ 58 + F + + RP L +P+ +L + + A + A G+ + P Sbjct: 17 MYVWLPNFAMTLARLKRPRLAKRREPLALLEKHGTVRRIAALDGPAIEAGLYLHQPLADA 76 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD 118 + +V ++ AD + + +P + D+TG + D Sbjct: 77 LAVCP--KLVTADADPAAEADARAALALWAQRYTPATAPA-PSGLWLDITGCAHLVGDED 133 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAA--------------KKWQRQTGGVV 164 + L+ + IA T A H A + Sbjct: 134 ELADDLLGRLEARGIPARAAIAPTFGAAFALAHHAERYVIAGDFAAARDAPPPLSRQATL 193 Query: 165 DLSNLERQRKLMSALP-----VDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 S+ +R+ + A V+ + I + L +G+ T+ D+ + + F Sbjct: 194 FESDEDRRVEAGLAALLAPLPVERLR-IAPETASVLRKLGLYTIGDVMPLPRASLARRFP 252 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 +L + + G ++ + F E + + + + +L Sbjct: 253 DLLPQL-DKALGRADEAIDFLREPTPWL-ERLRFAEPLAAPEDIERVTRALLDMLCRRLE 310 Query: 280 SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 E + + +V P +D ++ L + G Sbjct: 311 RERHGGLTFEVSFFRADGGVEGQ------TVTTALPCRDQARVMRLFREKL-PLIDPGFG 363 Query: 340 YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 A + Q N+ E L ++D + ++ G G +Y ++ Sbjct: 364 IDSAMIFASRVEPLEARQSNILRKVQGEASLEDLAALIDGIESRFGEGRVYRFA--PRES 421 Query: 400 WQMKRA 405 +RA Sbjct: 422 HMPERA 427 >UniRef50_B6HVX2 Pc22g06410 protein n=8 Tax=Trichocomaceae RepID=B6HVX2_PENCW Length = 572 Score = 124 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 62/441 (14%), Positives = 114/441 (25%), Gaps = 106/441 (24%) Query: 4 LC-DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D + FYAS V +P+L P+ V V+ N EA+ G+ K + Sbjct: 32 HIQDYDCFYASVFEVEQPELRSLPLAV--QQKQIVVTCNYEARRRGLHKLQLIKDAKRIC 89 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEE--LSPRVEIYSIDEAFCDLTGVRNCRDL---- 116 +V + + + S + + RVE DE F D+T + + Sbjct: 90 PDVVIVLGE-DLTKFRNASRELYQLVRSFVWGGRVEKLGFDELFLDVTEMIDYNTGVQNQ 148 Query: 117 --TDFGREIRATVLQRTHLTVGVG-IAQTKTLAKLANHAAKKWQ---------------- 157 + + + A A A+K Sbjct: 149 NDLENSYFHLDRNDPTVGFSYDATRFQGSTFPAMEAACIARKNSSSSEMRLLVASHLQGH 208 Query: 158 ------------------------------RQTGGVVDLSNL--------ERQRKLMSAL 179 + G L + + Sbjct: 209 IRSKLEHEIGFTATGGISTSKLLAKLVGNVHKPNGQTTLLPPYTATENNTSNVFQFLDDH 268 Query: 180 PVDDVWGIGRRISKKLDAMGIK---------TVLDLADTD---IRFIRKHFN------VV 221 + + GIG RI++KL + I TV D+ + + + Sbjct: 269 EIRKIPGIGSRIAQKLKSH-ITGQENVDEKITVKDVRQFPGMGPPLLDRILGGPGSVKGI 327 Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR-- 279 R L G ++ E +I S+G + +R+ + + ++R Sbjct: 328 GMRIWSILHGVDNSEVLEGRDVPTQISIEDSYGR-LDTLEGVRRELVVLSRSLIRRVRTD 386 Query: 280 ----------SEHQYCRFISTFIKTSPFALNEPY------YGNSASVKLLTPTQDSRDII 323 + + T P +P S S L + + I Sbjct: 387 LLDMSDESAPRGRWRAHPRTVRLSTRPRPPPDPGGRSYNSNRISRSAPLPPFVFNLDENI 446 Query: 324 NAATRSLDAIWQAGHRYQKAG 344 +A L ++K Sbjct: 447 DALAERLVRESLFSM-FRKLH 466 >UniRef50_Q0BZD3 Putative uncharacterized protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZD3_HYPNA Length = 521 Score = 124 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 47/360 (13%), Positives = 92/360 (25%), Gaps = 22/360 (6%) Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 G+ G + + + + E A + + SP V + ID + Sbjct: 49 GIHAGLRFTDARATLPD--LASEEIDRENDARALTALAGWMVRFSPLVGVDGIDGLILET 106 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 TG + + L + IA T A G + Sbjct: 107 TGCDHLFGGESGMAAELSAKLAHAGYGHKIAIAGTVGAAWALT-----HATVEMGKPVIL 161 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF----NVVLE 223 +R ++ LP + + L G+ + L D D + + + F + Sbjct: 162 ANGDERTGLADLPTRALR-LSESSQILLRRFGLTRIRQLYDIDRKALTRRFNSRQSADAV 220 Query: 224 RT-VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH 282 R + + G F P E +TD + + E L + Sbjct: 221 RLRLDQALGIRPEPFTPFRPPPD-YSTRLPCPEPLTDGAGISAGLSRLTEELCEHLSASG 279 Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 + S + + V+ + T + G Sbjct: 280 VGAQSFLLQAFRSDGEIARIRVNAARPVRKPEHV---MRLFGEKTDA----VDPGFGIDL 332 Query: 343 AGVMLGDFFSQ-GVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 + ++L + + L + D +NA+ G G + Q Sbjct: 333 LLLEAFRTGEMATGSRLISGGFSQADVDEDALAALADRVNARLGEGVVTVTIPEAHHPPQ 392 >UniRef50_D0LTL3 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LTL3_HALO1 Length = 527 Score = 124 bits (310), Expect = 9e-27, Method: Composition-based stats. Identities = 55/438 (12%), Positives = 118/438 (26%), Gaps = 42/438 (9%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D+ AF P+ G PVV++ G ++ + A+ + G + Sbjct: 5 ACVDLPAFPLQLLRQRHPEWAGHPVVIVDEDAPQGRILWADERARERRILPGQRYAHALS 64 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYS--IDEAFCDLTGVRNCRDLTD 118 L + A + V L E SP +E + + D G+ Sbjct: 65 LAPDLHAGVI--DEREIAAGVDAVCELLREFSPEIEPCADLPGVFWLDGAGLERLFRSLR 122 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 L+ V + + T+ + + + + + Sbjct: 123 KWARGIERALRERGYEVALAVGFTRFGSYAVAR------GRPRALSIFDDRASEHAAARD 176 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + ++ + G+ ++ + L +G+ TV + I + F R R GE L Sbjct: 177 VALERL-GVDPQLREHLRRLGVVTVGEFLHLPAGGILERFGAEAHRIHRLAAGESWDPLR 235 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 + + F + + + A+ ++L + ++ + Sbjct: 236 PTPAPEP-LEECVLFDDPERNTERLLYALEGALTPLLDRLAKDRCALTRLAVELTLDDAI 294 Query: 299 LNEPYYGNSASVKLLTPT--QDSRDI------------------INAATRSLDAIWQAGH 338 + +D+ D + R Sbjct: 295 QTRAQPRTRGRNRPSAHVEGRDAHDHPVRVDAIRPAEPTLELQTVMRLVRLRFEAEPPRA 354 Query: 339 RYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 ++ + +G QL LF + L A+ G + A Sbjct: 355 AVRELRLRVGAIL-ATREQLELFAHAPR-RDLRAANEALARLRAELGDHAVVKASLREGH 412 Query: 399 ------QWQMKRAMLSPR 410 W+ R + P+ Sbjct: 413 LPEARYAWEPLRELRLPQ 430 >UniRef50_A9AEV1 Nucleotidyltransferase/DNA polymerase n=45 Tax=cellular organisms RepID=A9AEV1_BURM1 Length = 495 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 51/365 (13%), Positives = 99/365 (27%), Gaps = 13/365 (3%) Query: 35 GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR 94 G V+ +A A+ GV+ G L +V + AD V L SP Sbjct: 37 GVVLIADAAARRQGVRAGMKRGGVLTLAPDTQLV--ERDPAREADALRAVALALLRFSPN 94 Query: 95 VEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 V + D+ L + A T A L A Sbjct: 95 VALADEATLVVDVGPSLRLFGGLPSLCRQVRATLAALGYAARMSAAPTAGGAWLLARA-- 152 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 + ++ + + ALP + R + D +G +T+ DL + + Sbjct: 153 --SARVRSRRRVARRASLVRALDALPCVLLPD-ARPYAGWFDGLGCRTLADLRGLPRKGL 209 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 ++ L + G+ L A ER+ ++ + Sbjct: 210 QRRCGPALLAALDRAYGDAVEPLAWMAVPPV-FDVRLELAERVDYAEAVLFVARRLVVQL 268 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 L + ++ ++ P S + P +D + L + Sbjct: 269 CGWLAARQLSLAAMTFDLEHERGRQAVPP--TSLELAFAAPVRDEAHFMRLLGERLARVE 326 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 + S +LF + + +++ L A+ G + A Sbjct: 327 LP-AAVIAVRLKATRVESVAPPADDLFPEPGGTKETRA--RLLELLVARLGAENVLCAAP 383 Query: 395 GIQQQ 399 + Sbjct: 384 VADHR 388 >UniRef50_B0W8N7 DNA polymerase eta n=1 Tax=Culex quinquefasciatus RepID=B0W8N7_CULQU Length = 820 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 60/404 (14%), Positives = 126/404 (31%), Gaps = 76/404 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY E P++ G+P+ V+ G +IA N A+A GV + Sbjct: 16 VVVLVDMDCFYCQVEEKLNPEIKGQPIAVVQYNPWQGGGIIAVNYPARARGVTRHMRGDE 75 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG--V 110 + + ++ Y D V + L+ +P +E S+DEA+ D+T + Sbjct: 76 ARQHCPEIVLPQVPQRGGKADISKYRDAGKEVAAVLQTFTPLLERASVDEAYMDITERVL 135 Query: 111 RNCRDLTDFGREIRATVLQRT---HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 D+ ++ L T VG K ++ + + + ++ Sbjct: 136 ARLHDMNVGKFHLQPETLDNTFAVGYE-SVGQYVQK-ISCDLDGRSSSQELESEEDRVAY 193 Query: 168 NLERQRKLMSALPVDDVW-------------GIGR-----RISKKLDAMGIKTVLDLADT 209 + L+ A V+++ GI +++ + +TVL L Sbjct: 194 KKSDIKLLIGASIVNEIRAAVKEKTGYECSAGIAHNKILAKLTAGFNKPNKQTVLPLKSI 253 Query: 210 D------------------------------IRFIRKHFNVVLERTVRE---------LR 230 + + + L+ E R Sbjct: 254 SKLYQTLQIKKVKGLGGKLGEQVCELLKIEFMSQLTQFSEKQLQAHFDERMGSWMYLMAR 313 Query: 231 GEPCLQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 G + + I C + F IT +++ + A ++L + Sbjct: 314 GIDLEAVTPKFN-SKSIGCCKRFPGKNAITGLATLQHWLGELANEIQDRLEKDLDENNR- 371 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDA 332 + T +A S++ + ++ I A ++ Sbjct: 372 TARQMTVSYAQQIGDNDVSSTRSVPLVCYEAERIAKDALEAIRR 415 >UniRef50_A2WV83 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group RepID=A2WV83_ORYSI Length = 498 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 73/220 (33%), Gaps = 23/220 (10%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVL---SNNDGCVIARNAEAKALGVKMGDPWFK 57 + A D++ FY E P+L G+P V+ G +IA + EA+ GVK + Sbjct: 13 VIAHVDMDCFYVQVEQRRNPELRGQPTAVVQYNDWKGGGLIAVSYEARKFGVKRSMRGDE 72 Query: 58 QKDLFRRCGVVCFS-----SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 K + +V ++ +Y + V++ L + E SIDE + DLT Sbjct: 73 AKMVCPSINLVQVPVARDKADLNVYRSAGSEVVAILSTKG-KCERASIDEVYLDLTDAAK 131 Query: 113 ---CRDLTDFGREIRATVLQR--THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + I + L + + + L + V D+ Sbjct: 132 EMLLESPPELLELIFEEATKSNILGLPSVIFVLHDLIVVSLQFDMNVTNRASY--VQDVI 189 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 N E + + KL + G V L Sbjct: 190 NREDSVRAW-------LCRADADYQDKLLSCGAIIVAQLR 222 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 9/140 (6%) Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 ++R VL+ T T GIA K LAKL + K Q+ + + + + Sbjct: 217 IVAQLRVKVLEETQFTCSAGIAHNKMLAKLVSGMHKPAQQ------TVVPSSAVQDFLVS 270 Query: 179 LPVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQ 236 LP+ + +G ++ L +G+ TV DL +++++ V + RG + Sbjct: 271 LPIKKMKQLGGKLGSSLQDDLGVNTVGDLLSFTEDKLQEYYGVNTGTWLWKIARGISGEE 330 Query: 237 LEEFAPTKQEIICSRSFGER 256 +E+ + C ++F Sbjct: 331 VEDRLLP-KSHGCGKTFPGP 349 >UniRef50_A5FTH4 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=31 Tax=Alphaproteobacteria RepID=A5FTH4_ACICJ Length = 522 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 57/389 (14%), Positives = 116/389 (29%), Gaps = 26/389 (6%) Query: 20 PDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELY 77 P P+++ N V A N A+ LG+++G + + L G+ + Sbjct: 40 PPSPETPLILADRDGNRRIVFAANGVAQDLGLRIGMAVAQAQALIP--GLTIRDAEPLAD 97 Query: 78 ADMSNRVMST-LEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVG 136 R+ L +P V D D TG + R L +T Sbjct: 98 VAGLERLALWALHRYAPIVAADPPDGLVIDATGAAHLRGGEAQMLRDMIARLAAAGVTAR 157 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 +A + A V ++ ++ R ++ LP+ + + + L Sbjct: 158 AAMADSWGAAHALAR-------FLANPVFVALADQSRDILLTLPIAALR-LPTEMITGLR 209 Query: 197 AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 +G + + DLAD + F L R + + G +E I ++F E Sbjct: 210 RLGFERIGDLADQPRAPLALRFGPQLHRRLDQALGTLAEAIEAARSP-DLIEVRQNFAEP 268 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 I ++ + L ++ R + G + + Sbjct: 269 IGAAETIARYTGILVTELCTMLEAKGLGARQLDLVFHRVDAHSEAIRVGTALPAR----- 323 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 +++ + ++ I G + + G Q + + Sbjct: 324 -NAKRLTRLLCDKIETI-DPGFGIEIMALCAARSEPFGPKQ---LTSLLADEPETDISDL 378 Query: 377 MDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 +DT+ + G LY +R+ Sbjct: 379 IDTIANRVGGDRLYRFAPVA--SDVPERS 405 >UniRef50_B7ANI6 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7ANI6_9BACE Length = 194 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 8/181 (4%) Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 + ALPV D+ +GR ++KL IKT+ DL TD F+ + Sbjct: 2 YKSEFKHKAWALPVGDLLYVGRSTNQKLTKFRIKTIGDLTRTDEAFLHSQLGKMGNILWS 61 Query: 228 ELRGEPCLQL--EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 G + E + + S + + + ++ + A A +LR C Sbjct: 62 FSNGYDDSPVKKENTHAPIKSVGNSTTTPRDLENDGDVKIVLYILAESVAARLRENGFRC 121 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 R + ++ + + + K+ T + +I A + + + + GV Sbjct: 122 RVVEISVR------DNELFSFTRQKKIDHATNITGEIAAYAYQIVKENYHWQKPIRSVGV 175 Query: 346 M 346 Sbjct: 176 R 176 >UniRef50_A0YAE9 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YAE9_9GAMM Length = 481 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 56/383 (14%), Positives = 118/383 (30%), Gaps = 29/383 (7%) Query: 33 NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 V+ N A G+K G L V ++ V S Sbjct: 18 ERQIVLQANPPAVEKGIKNGHSMATALSLHPELQAV--ERQINREKELLEHVAVWAYRFS 75 Query: 93 PRVEIYSIDE----AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKL 148 P+V SIDE F ++ G + + +++ L G++ + L Sbjct: 76 PQV---SIDEQLSAVFLEIRGSLKLFRGFNRLFHYLSEGIKKRKLHFYCGLSHNPIASYL 132 Query: 149 ANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLAD 208 +++ K + ++ + ++ALPV + + + K L +MG+ + + Sbjct: 133 ISYSDK-DPEYYRQSPTKLDSKKILQNLNALPVALLP-CRKSVKKNLQSMGLTHIHSVFS 190 Query: 209 TDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAIC 268 + K F + L+ E F P + SR F + + + I Sbjct: 191 LPKTSLGKRFGREFFDLIAYLKNEEKEHRSLFVPPEH-FNSSRYFLNGLNNKQQLHPYIN 249 Query: 269 SYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATR 328 LR R ++ + + +S R + + Sbjct: 250 QLLTELKNHLRFRQLINRQLNWQLNYIDGGSDSLRLNSSLQ------VFQQRSLFDITLL 303 Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD------NAPRPGSEQLMTVMDTLNA 382 L+ + + + + +F G +LF +E+ VMD L + Sbjct: 304 KLEQMKLRAN-IESLSLSCKEFEKIGSYNDSLFQQHDNELLAEDDSKNEKYNVVMDKLLS 362 Query: 383 KE-GRGTLYFAGQ---GIQQQWQ 401 + + + + ++ W+ Sbjct: 363 RLQSKHCIQLSTHNDLLPEKAWR 385 >UniRef50_B9QVQ0 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QVQ0_9RHOB Length = 523 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 57/363 (15%), Positives = 117/363 (32%), Gaps = 17/363 (4%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV 95 +++ N A+A G+++G+ + ++C ++ E + V +P V Sbjct: 9 RIVSMNDTARACGLRLGEAEADARARIPH--LLCEDADPEKDTALLGAVADWCARYTPLV 66 Query: 96 EIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 + D F D+TG + + + L R V IA T A Sbjct: 67 ALDGKDGLFLDITGCAHLFKGEEALLKDALERLHRQGFCVAGAIAGTAGAAWALARYG-- 124 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 +GGV+ S + + + L+ +G+KT+ L D + Sbjct: 125 ----SGGVLADSQERQALAPLP----LAALRVSSEAVSGLNQVGLKTIGQLYDRPRAPLT 176 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 L + + G + I R F + I+ ++ S A +AA Sbjct: 177 NRLGADLILRLDQALGWQGEAISP-RFEAPLISAERRFFDPISQLDDVKAVALSLAGQAA 235 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 + L + R + A+ + G S+ ++ + ++ + Sbjct: 236 KALERRVEGGRVFELSLFRVDGAVQKFRVGTSSPLRDPKRV---LRLFAEKLKADEGAID 292 Query: 336 AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 AG Y + + + A + N + L ++D L A+ G + Sbjct: 293 AGFGYDLVRLDVL-VADKAPAVQSALTANGAVEANASLDDLVDRLGARLGSERVTRLLPV 351 Query: 396 IQQ 398 + Sbjct: 352 DRH 354 >UniRef50_B5GWK1 Putative uncharacterized protein n=1 Tax=Streptomyces clavuligerus ATCC 27064 RepID=B5GWK1_STRCL Length = 333 Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats. Identities = 59/288 (20%), Positives = 110/288 (38%), Gaps = 18/288 (6%) Query: 83 RVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT--DFGREIRATVLQRTHLTVGVGIA 140 R++ L E++PRV+ +A C++TG D R IR L + +G A Sbjct: 23 RLLDLLREVTPRVQALPPADADCEVTGGPRAFDGDPGALARLIRTRALTFHGVVTSIGCA 82 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSN--LERQRKLMSALPVDDVWGIGRRISKKLDAM 198 + +TLA +A AA G L E + PV + G+G ++ L Sbjct: 83 ENRTLAAMAADAAGP------GRTVLIPRHPEAVAGFLRPRPVTALPGVGPATARLLVHH 136 Query: 199 GIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 G++TV +ADT + +R+ +R G + P +F Sbjct: 137 GLRTVGAVADTPLPTLRRLLGAAEGQRLSERAHGVDHRPVSPGEPPA-FRTAGHAFARDE 195 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 D R+A+ + A R +LRS+ + ++ ++ + + + L P+ Sbjct: 196 LDPGRRRRAVAALAERIGGRLRSDGRIAGRLTLTVRYADGS------TTARDRALPEPSH 249 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNA 365 +++AA +++ R + + G+ + A L D Sbjct: 250 SGPVLVSAACSLYESLGLQRARVRGLSLRAGELLPEAYAATQLGFDFP 297 >UniRef50_Q2NAX5 Putative uncharacterized protein n=3 Tax=Erythrobacter RepID=Q2NAX5_ERYLH Length = 529 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 60/405 (14%), Positives = 119/405 (29%), Gaps = 33/405 (8%) Query: 14 CETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 CE PD ++ + + + A N A G + G + L V S+ Sbjct: 32 CERGEGPDAAPLALITETAHGPRIDAANDAGAAAGARKGMMLADARTLCPELKVA--PSD 89 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 D ++ + P + D D+T V + + + + Sbjct: 90 PAGDLDALEKLALWAQRWGPWSALDPPDGVVVDVTAVAHLFGGETKLLADAQALFAKRGI 149 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 T + IA T A H L+ + +S LPV + + + Sbjct: 150 TARLAIAPTAGAAWALAHYGPPRSI-------LAADDDMAARLSELPVAALR-LDDDVLT 201 Query: 194 KLDAMGIKTVLDLADTDIR-----FIRKHFNV------VLERTVRELRGEPCLQLEEFAP 242 L +G+K + +L + I + F + +L G+ L Sbjct: 202 ILRRLGLKKLGELGKVESEGGGRDAIMRRFRNRKSPAANPLVRMDQLLGKVPEPLLPVIA 261 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 ++ R E I + Q + A +L R + + + Sbjct: 262 QHDPLVQRR-LVEPIRHRALLDQVLRDLAEDMVRELEGRGSGARRLELGLWRVDGEV--- 317 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 ++L T+D+ + + L+ I AG + + +AQ ++ Sbjct: 318 ---VVRRLELAAATRDADHMCRLFSEKLEDI-DAGFGIETVRLRASWAEPLALAQGDI-- 371 Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + + L +D L + G + +RA Sbjct: 372 EASAEEHGTSLAAFVDRLTTRLGPRAVRRPIPF--GSHIPERAQR 414 >UniRef50_A4TZ00 UmuC protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZ00_9PROT Length = 200 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 1/189 (0%) Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 +L A KQ CSRSF E +T Y + A+ ++A+RAAEK+R++ + F +T Sbjct: 11 RRLTPTAVAKQTTCCSRSFAEAVTLYDHVHDAVLTFASRAAEKIRADGLVAGALQVFAQT 70 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 F ++P + +A V+L T + +I AA L + W+ G+ Y+KAGV+L D + Sbjct: 71 DRFRRDQPQFSLNAMVRLSPATDSTPRLIAAAISGLHSAWRDGYAYKKAGVILIDLVNPA 130 Query: 355 VAQLNLFDDNAPR-PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTT 413 +LF ++ LM +D LN + G+G + + WQM+ SP YT+ Sbjct: 131 NIARDLFSPPPDTGARAQALMNAVDGLNNRMGKGAVGYGLVAKGAPWQMRCGNRSPSYTS 190 Query: 414 RSSDLLRVK 422 DL K Sbjct: 191 DWMDLPVAK 199 >UniRef50_C4LH03 Putative DNA polymerase involved in DNA repair n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LH03_CORK4 Length = 573 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 46/344 (13%), Positives = 100/344 (29%), Gaps = 37/344 (10%) Query: 11 YASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 YA+ ++ P+ ++ + V + +A+ +GV+ G + + L + Sbjct: 40 YAA---RCDNEVPDGPLALVDQHG--VYVCDRQARHVGVRRGMKRRQAQSLCPTMHI--M 92 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 ++ + A ++ ++ +S +E+ + + + + R Sbjct: 93 PADDDRDARYFEDFVADVDSISAGIELLRPGLIAVKSAPLVKYYGSEERAITMVLDAVAR 152 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV-----W 185 + V G A T A A ++ LPV + Sbjct: 153 PGVDVIAGAAGTLPTAVFAARRG-----------MTIPEGHDADFLAGLPVRTLCEDKAL 201 Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQ 245 G + + L+ MGI + D A R + F RG P +L T Sbjct: 202 GQPQELVDTLEKMGITRMKDWAGLSRRDVSSRFGAEGLWWWSIARGAPSRRLTPQENTSD 261 Query: 246 EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF--IKTSPFALNEPY 303 + + + ++ AA ++L Q C ++ I+T Sbjct: 262 -LAITHHCDSPESRSDTVAFIGRRLAADLHDQLSDRGQICLRVAIRALIRTPDGDQE--- 317 Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 L + + + A G ++ Sbjct: 318 --------LERVWRCTDQLTEHAIAQRVRWQLEGWLHRFVSRAA 353 >UniRef50_Q7MLY1 Uncharacterized protein conserved in bacteria n=18 Tax=Vibrionales RepID=Q7MLY1_VIBVY Length = 467 Score = 121 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 45/388 (11%), Positives = 115/388 (29%), Gaps = 24/388 (6%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+ V+ V+ N A G+ +G L + V+ + +L + Sbjct: 25 PLAVVHPQSHQVVQINDLASNAGLAVGMGLASAATLCSQLQVIV--YDEKLEHRKLKEIA 82 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 L ++ + + + ++ + N D + L ++ + Sbjct: 83 QWLYFMTADLVLDPPSGLWVRVSHMLNLYQGLDNYWHTLSAHLATLAVSYHASTGFSPLS 142 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLD 205 AKL A + N + P+ + +KL +GI T Sbjct: 143 AKLLAKAGHP--------LISDNQTELLTKVKKHPL-TFSELKATTIEKLQRIGIHTFDA 193 Query: 206 LADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQ 265 L ++ + + F++ L + +L G+ ++ + P + + + + + Sbjct: 194 LLTLPLQELARRFDIELVNYIGKLTGQLKHPVDFYHPPSR-FKQELELLFELDNVQWLEK 252 Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 + + L ++ + + + S + +Q + + Sbjct: 253 PLEKLFRQLESYLTIRNKTAHELQLTLFQRNDLSKAISF---HSAQGEYRSQQWQKLS-- 307 Query: 326 ATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEG 385 + + + +LF + +L ++ L AK G Sbjct: 308 --ALTLESTILQAPVTRLQLEVIREGEPNAHPTDLFSHRTGQLSRLELYSL---LQAKLG 362 Query: 386 RGTLYFAGQGIQQQWQMKRAMLSPRYTT 413 ++ A G+ + ++A T Sbjct: 363 ADSI--ATLGLNHDPRPEKATRYQSTLT 388 >UniRef50_B8ELP7 Putative uncharacterized protein n=1 Tax=Methylocella silvestris BL2 RepID=B8ELP7_METSB Length = 488 Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 40/353 (11%), Positives = 90/353 (25%), Gaps = 11/353 (3%) Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN 112 + + ++C ++ E A ++ +P + + D D++G + Sbjct: 1 MNLADARAMHP--ALICAEADPEGEAQTLAHIVDWCRRFTPLAALDAPDGVMLDVSGAAH 58 Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 L+R G+A T A L + Sbjct: 59 LFGGEASLLAEIEESLRRQGFCAQGGLASTPEAAFALARYGAADFAARILPPAL-DAVEL 117 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGE 232 + + LP+ + + L G++ + D+ I + L + L G Sbjct: 118 ERRLGGLPLAALR-LEPETLSALAEAGLRRIRDVTMRPRAPIAARCGLALYARLDGLLGR 176 Query: 233 PCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + + R F + + + +I A L + R + + Sbjct: 177 VKTPISP-RFEAPAFMTERRFLDGLCRREDVEASIAGLAQDLCALLTRHGEGARRLEASL 235 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD--AIWQAGHRYQKAGVMLGDF 350 + G ++ A + AG + + Sbjct: 236 FRVDGEVMHFTVGTMRPLRDPALIARLFHERFEALSLAQDGEAFDAGFGFDVIRLAALAL 295 Query: 351 FSQGVAQLNLFDDNAPRPGS----EQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + Q + + E L ++D L A+ G + Sbjct: 296 ERKDPEQTGWSGQDRAEDRAQDHVEDLAELIDRLGARLGLRRVTRLAFNGTHA 348 >UniRef50_UPI0001874386 polymerase involved in DNA repair n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI0001874386 Length = 554 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 49/301 (16%), Positives = 94/301 (31%), Gaps = 21/301 (6%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 AS + P PV ++ D V A + A+ GV+ G + L VV S Sbjct: 25 ASVTSQANPL---SPVAIVG--DSGVAACSPSARRAGVRRGQSRRHAEALCPELEVVEES 79 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 + A V+ LE ++ VE A GV D E Sbjct: 80 A--VRDAAEFESVLQRLEVVAAGVEALRPGLAVVAARGVMRYYGGQDVALEKLLDAAAVP 137 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW-----G 186 + +G+A A LA GV+ + ++ + + ++ Sbjct: 138 GVDCSLGLADDIVTAILAAR---------RGVLVAPGEDEGKRFRQGISLVELRAESALE 188 Query: 187 IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQE 246 + ++K +G++T+ D+A R I F R + + Sbjct: 189 MPAELAKSWQELGLRTLGDVAALPKRDIANRFGAQGARWHDLACRGEVRLVAPRSLPPGL 248 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 + +S+ + A + E+L + C ++ + S + + Sbjct: 249 AVSYQSWESPLRRVDEASFVARFLAGQLHEQLFNHGYSCYRLAVVAQFSDGSEVRRVWRC 308 Query: 307 S 307 + Sbjct: 309 T 309 >UniRef50_Q92ZK0 Putative uncharacterized protein n=1 Tax=Sinorhizobium meliloti RepID=Q92ZK0_RHIME Length = 244 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 7/165 (4%) Query: 142 TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIK 201 K LAK+A+ K + + + + LP+ G+G ++K+ +GI+ Sbjct: 80 NKFLAKMASGQNKPDGQF------VITPKNGPAFVEQLPIKKFQGVGPATAEKMHRLGIE 133 Query: 202 TVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 T DL + + F+ +HF RG Q++ ++ + + E I + Sbjct: 134 TRADLKEQTLEFLVEHFGESGPCFYGIARGIDNCQVK-ADRVRKSVGAEDTSSEDIHSFE 192 Query: 262 SMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 + R+ + + + + + +K + F + G Sbjct: 193 AAREGLQPLIEKVWSYCEANEISAKTVPLKVKYADFPDHPEQDGC 237 >UniRef50_Q1IJA4 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJA4_ACIBL Length = 495 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 64/392 (16%), Positives = 117/392 (29%), Gaps = 28/392 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVV--LSNNDGCVIARNAEAKALGVKMGDPWFKQ 58 M+A+ F A RP+L KPV V V A N A +GV+ G + Sbjct: 1 MYAVIYAREFPAQALLRLRPELRQKPVAVMEGEPPREFVCAANEFAYRMGVQRGMTRPQM 60 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSID---EAFCDLTGVRNCRD 115 + L V + ++ SPRVE + D++G Sbjct: 61 EVL---EAVETLRRSRAEEDAARAALLECAGRFSPRVEELRFEYTLAVGADISGTEKLLG 117 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 T+ + V V + A AK + + +RK Sbjct: 118 TTEQIVRRMCEHAAVMGMEVSVAASCNFDAALC---WAKAHAGTK-----VISPGEERKT 169 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCL 235 ++A+PV DV + S G+ T+ +LA + +R GE Sbjct: 170 LAAVPV-DVLDLTLDQSVTFSLWGVHTLGELAALPQAELIARLGQDGKRLRELACGEHQH 228 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 L+ + F + S+ + + +++S ++ Sbjct: 229 LLKPVGEPFV-LREEIEFEADVESLDSVMFVLAPMLQQLCLRVQSRALALASVTVQCGLD 287 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV 355 + + +V+ + PT D + ++ G V + Sbjct: 288 GGTTH------TRTVRPVLPTIDHQALLK-LIHLDLIANPPGAAVVALRV---FTETNRP 337 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRG 387 ++ L + P +L + L A G Sbjct: 338 SRAQLGLFSPQFPEPMRLEVTLARLAAVVGGE 369 >UniRef50_C5BVF2 DNA-repair protein n=2 Tax=Micrococcineae RepID=C5BVF2_BEUC1 Length = 562 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 46/390 (11%), Positives = 97/390 (24%), Gaps = 29/390 (7%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 P+ V + + A +A A++ GV+ G + L +V + Sbjct: 43 PAHAPIAVHDSR--VLTAVDARARSQGVRRGMRRRTAQGLCPDLELVAM--DEGRDVRAF 98 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-FGREIRATVLQRTHLTVGVGIA 140 V+ +E + VE+ G + + TV VG+A Sbjct: 99 EPVVQAVEGVVAGVEVSRPGLVVLAAGGPSRYVGTEEALAELLVGTVADEAGTECQVGVA 158 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG---------RRI 191 + + ++ PV D+ + + Sbjct: 159 DGLLA-----------ALLAARDGLIVPPGTSAEYLAGRPVRDLLHVATTRESHARLADL 207 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 S L +GI T+ A + F V + R RG + + ++ Sbjct: 208 SDLLRRLGIGTLGAFARLRAGDVLARFGDVGTQGYRLARGLDARPVS-VRRPEPDVTVRA 266 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 + A A +L C + +T + + + Sbjct: 267 DLDPPAARLDTAAFAARRLAEDLQNRLLRRGAVCARLRVLARTEGGSELVRTWRIDGAAT 326 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 T R + + + ++ + G AQ L+ + Sbjct: 327 ATELTDRVR-WQLEGWLNGRSGQAPSAPLVRLELVAEEVTPAGTAQDGLWGRRSRGEQQA 385 Query: 372 QLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 + G + + + Sbjct: 386 --GRAALRVQGLLGSSQVLTPVLEGGRSPR 413 >UniRef50_D1BHX8 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BHX8_SANKS Length = 553 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 54/416 (12%), Positives = 103/416 (24%), Gaps = 47/416 (11%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 +P V V+A +A A+A GV+ G ++ + + Sbjct: 50 PAQQPAAVHDGRR--VVASSAPARAQGVRRGMRLRTAQECCPELEL--LPVDDARDTRDF 105 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD-FGREIRATVLQRTHLTVGVGIA 140 V +E L +EI G + R + TV +RT VG+A Sbjct: 106 EPVAVAVETLVAGLEIARPGLLLLPALGATRYHGSEEELARRLVETVAERTGHECQVGVA 165 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG---------RRI 191 L + R+ ++A P+D + R + Sbjct: 166 DGILA-----------SLLAARTALLLPPGQTREFLAAHPLDALLHAATSPDAVTETREL 214 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 +G++T+ DL+ + F R RG I Sbjct: 215 VHLWTRLGLRTLADLSALAEADVHTRFGERGRWAHRMARGADLRPPARRRLEPD-IGVET 273 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 + + + S A + C + T + + Sbjct: 274 ALDPPVERVDTAAFVARSLAEDLYALVLERSVTCSRLRISAHTESGLALSRTW---RTDD 330 Query: 312 LLTPTQDSRDIINAATRSLDAI----------WQAGHRYQKAGVMLGDFFSQGVAQLNLF 361 + I + L+ + + + G Q L+ Sbjct: 331 GALGGLSAARITDRVRWQLEGWLSATGVRGEGDPEPSPLVRLAITAEGVVAAGAQQGRLW 390 Query: 362 DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSD 417 + + V + + G + A + + L P D Sbjct: 391 GAASGDELRAR--RVTERVQGILGGEGVLSATLQGGRS-AQDQVHLVP-----WGD 438 >UniRef50_B7ZA36 cDNA, FLJ79050, highly similar to DNA polymerase eta (EC 2.7.7.7) n=9 Tax=Mammalia RepID=B7ZA36_HUMAN Length = 651 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 73/213 (34%), Gaps = 12/213 (5%) Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 + E+RA + + T GI+ K LAKLA K ++ L Sbjct: 123 SPDLQLTVGAVIVEEMRAAIERETGFQCSAGISHNKVLAKLACGLNKPNRQ------TLV 176 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFN-VVLERT 225 + +L S +P+ + +G ++ + +GI+ + +L ++ HF Sbjct: 177 SHGSVPQLFSQMPIRKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWL 236 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSEHQ 283 RG ++ + I CS++F + ++ + A E+L + Sbjct: 237 YAMCRGIEHDPVKPRQLP-KTIGCSKNFPGKTALATREQVQWWLLQLAQELEERLTKDRN 295 Query: 284 YCRFISTFIKTS-PFALNEPYYGNSASVKLLTP 315 ++T + S ++ L Sbjct: 296 DNDRVATQLVVSIRVQGDKRLSSLRRCCALTRY 328 >UniRef50_D1ZXB0 C-terminus not complete (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZXB0_SORMA Length = 299 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 76/170 (44%), Positives = 105/170 (61%) Query: 14 CETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 VF P L KP++VLSN DGC IAR+ EAKAL +KMG P FK +D+ R G+ SS+ Sbjct: 130 ASRVFDPSLRDKPLIVLSNGDGCAIARSEEAKALHIKMGAPMFKIRDIVREHGIQYRSSS 189 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 YELYADM+ R L E S VE+YSIDE+F L + N + A V + T L Sbjct: 190 YELYADMNRRFNQVLAEHSCTVEVYSIDESFFRLPVLPNGLGDVAAAHRVIAAVKRATGL 249 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 + +G+ T+TL+K+AN AK ++ GVVDL ++E +R+L + PV++ Sbjct: 250 PIRIGLGPTRTLSKVANALAKASEKVWKGVVDLHDIELRRRLFAQWPVEE 299 >UniRef50_A2SG06 Putative uncharacterized protein n=2 Tax=Burkholderiales RepID=A2SG06_METPP Length = 466 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 58/377 (15%), Positives = 117/377 (31%), Gaps = 19/377 (5%) Query: 35 GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR 94 ++ N A ALGV+ G L + +V F + A + R+ L L+P Sbjct: 5 HMLLGANRAAHALGVRAGQSVATALSLLPQ--LVVFPRDRPREAALVERLALALAALTPH 62 Query: 95 VEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 + + D ++ + + + + V G A T A L + Sbjct: 63 LSLI-PDGVLLEVQSTLRLFGGIHALLHRAQALARTSGVQVRTGCAPTPGAAWLFATSGL 121 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR---RISKKLDAMGIKTVLDLADTDI 211 + + + LPV + + S+ L A+GI+T L Sbjct: 122 ARRHA-------LQARSSAQQLDRLPVASLARLLPPSLHQSELLQALGIRTFRALRALPR 174 Query: 212 RFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYA 271 +++ V L R + G+ F P + + R +R + + A+ + Sbjct: 175 AGLQRRLGVDLGRALDRCYGDAPDPRPWFVPPEH-FLARRELLQRADEAAVLMAAVEALL 233 Query: 272 ARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLD 331 L+ Q ++ ++ P ++L P++D + L Sbjct: 234 PALRGWLQLRWQAVTVLALRLRHEHGRE--PCPDTRLRLQLSAPSRDIAQLALLWRERLQ 291 Query: 332 AIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYF 391 A + + L G L + G ++D L A+ G + Sbjct: 292 RHVLA-APVYELALELEAAVPHGGTPGELLPGPGRQDGEHA--ALLDRLTARLGSDHVRR 348 Query: 392 AGQGIQQQWQMKRAMLS 408 + + + + S Sbjct: 349 WVPRADHRPEHAQRVRS 365 >UniRef50_C7MCU6 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Brachybacterium faecium DSM 4810 RepID=C7MCU6_BRAFD Length = 589 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 44/371 (11%), Positives = 95/371 (25%), Gaps = 39/371 (10%) Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G + V+ +++E + + V + ++ ++ V++ G Sbjct: 91 PGMKRRAARAACPD--VLVLEADHEHDSALFELVAAAVDTIAAGVDVLRPGVLLMSARGP 148 Query: 111 RNCRDLTD-FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + + I V + T VGIA A LA+ + Sbjct: 149 ARHQGGEEALAERILDAVAELTGWDCAVGIADGPFAALLAS-----------PPGRIVRE 197 Query: 170 ERQRKLMSALPVDDV------WGIGRR----------------ISKKLDAMGIKTVLDLA 207 R + ++ P+ + G G R L +GI T+ DLA Sbjct: 198 GRSAEYLAPHPIAALRHAPVGPGWGHRGQPSATRPERRLDLAETVDLLQRLGITTLGDLA 257 Query: 208 DTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAI 267 + F + RG+ PT+ + + Sbjct: 258 ALPSAAVADRFGPDVATLHLLARGQEPAPPAAHHPTQPLF-AETTLETPLVRTDQAAFIA 316 Query: 268 CSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAAT 327 A + L C + +T E + + ++ + R + Sbjct: 317 RPLAEQLHTMLLERGLVCTRLRIVARTESGEEMERTWRHDGALSVADVVDRIRWQCDGWI 376 Query: 328 RSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRG 387 A + G+ G + L+ +++ G Sbjct: 377 TRARLGGPATGAITRIGLHPQQLAPAGESAPALWGSAG--EAAQRASRAFARAQGLAGEE 434 Query: 388 TLYFAGQGIQQ 398 + + + Sbjct: 435 AVQVPARAGGR 445 >UniRef50_B4SMM0 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=3 Tax=Stenotrophomonas RepID=B4SMM0_STRM5 Length = 469 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 52/391 (13%), Positives = 118/391 (30%), Gaps = 27/391 (6%) Query: 17 VFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNY 74 +PD +P+V+L + A + A+A G++ G + L + + + Sbjct: 18 RLQPDPQ-RPLVLLQGPAQRRVLRAVSPSARAAGLRPGMLLSAAQVLVQDMHL--HDYDP 74 Query: 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLT 134 + S S +V + ++ R + L Sbjct: 75 NAEQHTRQLLASWAYAYSSQVSLDFPHALVMEIGASRALFGDWLTIEKRLRNELHELGFR 134 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 + A T A++ + + ++ ++ LP+ G+ Sbjct: 135 HRLVAAPTAHAARVLANVHDGLG---------IDAQQLPAALAQLPLPRC-GLPSEAVTV 184 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 L G++T+ + + + + F+ + + + LRG P L + P + F Sbjct: 185 LGRSGLRTLGAVLELPRDSLARRFSPEVLQQLDALRGLPTAPLRYYQPPDR-FDARIEFE 243 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 I ++ + A L C + ++ + ++ LL Sbjct: 244 YEIESSQALLFPLRRLLLDLAAFL------CSRDGGVQRFDLHFEHDLLPASVLTIGLLA 297 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 P +D + A ++A + + A +LFD + Sbjct: 298 PERDPALLFEIARNRMEAFALPAGS-RALRLQAEQLPPFVPAARDLFD--TRPAQAMPWN 354 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 + + L A+ G + + +RA Sbjct: 355 QLRERLRARLGDDAVQPLAVQADHR--PERA 383 >UniRef50_C0W385 DNA-repair protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W385_9ACTO Length = 552 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 49/387 (12%), Positives = 100/387 (25%), Gaps = 32/387 (8%) Query: 41 NAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSI 100 + A++ GV+ G + + L + + E A RVM L + + Sbjct: 54 SPRARSAGVRTGMRLRRARSLCPE--LTVLPAQPEREARSFERVMQALSTVLADPVVARP 111 Query: 101 DEAFCDLTGVRNCRDL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 A G + + V + T + VGIA + LA Sbjct: 112 GLALSGARGPARWLGSEEEVAESLVEAVARETGVECLVGIADSLLACILAARRG------ 165 Query: 160 TGGVVDLSNLERQRKLMSALPVDDV---------WGIGRRISKKLDAMGIKTVLDLADTD 210 + + + +S PV V + + + L +G++ + DLA Sbjct: 166 -----VIVPAGQTAEFLSPWPVSSVLVALATRREREQMKDLIETLTRLGLRRLGDLAQVP 220 Query: 211 IRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSY 270 + F + +R R G L + + ++ + + A Sbjct: 221 EADVTARFGPMGQRAHRLASGRA-WILPRSSRPETDVEVVAELDPPVARADAAAFAARHL 279 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 A +L + + ++ S +D + Sbjct: 280 AEELVAQLLRRGMVAGRLRVEAGCEDGSDLSRFWMLE-SAPTSAELRDRVRWQLEGWLAG 338 Query: 331 DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY 390 A + + + + G AQ L+ + + G G + Sbjct: 339 RAGQPPASALVRLSLTAMELSAAGSAQTGLWAGPDEQVRRRAYRAAQRV-ESLLGAGEVR 397 Query: 391 FAGQGIQQQWQMKRAMLSPRYTTRSSD 417 R S + Sbjct: 398 LPVVVPG------RDPRSRGVLMTWGE 418 >UniRef50_C9SHT7 DNA polymerase IV n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SHT7_VERA1 Length = 563 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 5/157 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQK 59 D ++F+ + P+L KPVV+ + + + N ++ GVK G K Sbjct: 25 ILHVDFDSFFCAVSLKKHPELVDKPVVIAHSPGHGSEIASCNYPSRKFGVKNGMWMKKAV 84 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF 119 +L V ++ Y + S + + V+ S+DEA D++ DL Sbjct: 85 ELCPELKV--LPYDFPAYEEASALFYEAILTVGGIVQSVSVDEALLDVSAALRPGDLRGL 142 Query: 120 GREIRATVLQRTHLTVGVGIAQTK-TLAKLANHAAKK 155 G ++ +T T G + A AAKK Sbjct: 143 GAQMTKLEPIKTGPTAVDGSQKRLAFPTFSAATAAKK 179 >UniRef50_Q1N4J7 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1N4J7_9GAMM Length = 480 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 52/382 (13%), Positives = 118/382 (30%), Gaps = 21/382 (5%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 + V+++S ++ N+ A +K+G L + + E + R Sbjct: 23 DQAVIMVSEQHHKIVQLNSVALEKELKIGMGLATAASLC--HDIQVLIYDEEKESKHLKR 80 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + L ++ + +Y + + + + L H V + T Sbjct: 81 IARWLYSVTADIGLYPPNGIVLRVDSMLHLYSDLKHYWHAVQQQLAHCHAQVHSAMGVTP 140 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 A+L + + + +Q L +L D+ + KL +G+ TV Sbjct: 141 LAARLLART---QTQPRPQISMDTKKLKQIALSKSLSDADIH---AKTRFKLSRLGLNTV 194 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 D+A + K F L +++L GE ++ + ++ I++ + Sbjct: 195 ADIAKIPRAELAKRFGHELAIYLQKLLGEIQDPIQFYI-PNKQFQEYVELAYEISNSQYL 253 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII 323 + + R L+ + C I+ ++ ++ + L Q I Sbjct: 254 IKPLQRLLLRLQYFLQQNNARCSEITLQLEHREEKATIEQIASAEPITLAEKWQSLCAIK 313 Query: 324 NAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 + H + +Q A+ +LF ++ L K Sbjct: 314 FENLKL-------KHPVIGITLTANKQSTQQSARGDLFSKKQNAMSE---NELISHLKIK 363 Query: 384 EGRGTLYFAGQGIQQQWQMKRA 405 G + G + + +R Sbjct: 364 LGDDRVL--GIRLNNDERPERE 383 >UniRef50_UPI00003828C5 COG0389: Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003828C5 Length = 208 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 11/215 (5%) Query: 198 MGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 GI TV +LADTD+ ++ G ++ + + +F Sbjct: 1 WGIWTVAELADTDVASLQAAVGKVSGAHLHDLAWGRDSRPVQPERSER-SVGAETTFEHD 59 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 + D +++ + A R A +LR + R +S ++TS F + + L PT Sbjct: 60 LRDLAAVQARVLELADRCAGRLRHQGLVARTVSVKVRTSDFR------TVTRARTLGAPT 113 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNA---PRPGSEQL 373 +R+I A + + G + GV + A + + A + Sbjct: 114 DVAREIYLVARELVAGVDLRGLAVRLVGVRAEGLEPRAEAVVQPTLEEAVVGTNAVRRRA 173 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLS 408 +D + + G ++ + LS Sbjct: 174 EEAVDAVRGRFGVRSIAMGPARARSTTNPGDVELS 208 >UniRef50_C4JRK3 Putative uncharacterized protein n=3 Tax=Onygenales RepID=C4JRK3_UNCRE Length = 599 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 56/401 (13%), Positives = 117/401 (29%), Gaps = 93/401 (23%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D + FYAS P L P+ V V+ N EA+ G++ + K + Sbjct: 19 DYDCFYASVFEAENPALKSLPLAV--QQKQIVVTCNYEARRRGLRKLQLIKEAKRICPDV 76 Query: 66 GVVCFSSNYELYADMSNRVMSTLEE--LSPRVEIYSIDEA-------------------- 103 ++ + + D S + + L++ RVE DE Sbjct: 77 VIMLGE-DLTKFRDASKELHAFLKKNTWGNRVEKLGFDELLNRHDLQNSFFQLDKFDPTV 135 Query: 104 --------FCDLTGVRN--------------------CRDLTDFGREIRATVLQRTHLTV 135 FC T R + +R + Q T T Sbjct: 136 GFAFDASTFCGPTYPAEPCPSVKEDGEQLWFSSLDVGLRLGSHLANYLRHQLEQHTPYTA 195 Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE----RQRKLMSALPVDDVWGIGRRI 191 VGI+ +K LAKL + K + T + + + + + GIG ++ Sbjct: 196 TVGISTSKLLAKLVGNLNKPRLQTTLRPPYSATDDGQGGNVASFLGQHEIGKIPGIGFKM 255 Query: 192 SKKLDAM--------------------GIKTVLDLADTDIRFIRKHFN------VVLERT 225 + ++ + V + + F + + Sbjct: 256 AHRIRTHILGREPNLDVYEGLAEEDNVSVDVVRSFPGMGPVKLDEIFRGGGWPKDIGTKV 315 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE---- 281 L G ++ +I S+ + + + S+R + + ++ ++ Sbjct: 316 WGLLNGVDDTEVAVGKAFPSQISIEDSYSQ-VDNLQSVRNELLPLTRKLLRRMHADLTED 374 Query: 282 ----HQYCRFISTFI-KTSPFALNEPYYGNSASVKLLTPTQ 317 + + P + + G +++L T ++ Sbjct: 375 EEGEELTTGHATVQAGRHLPVKRKKRWLGCPRTLRLSTRSR 415 >UniRef50_C7Q6R5 Putative uncharacterized protein n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q6R5_CATAD Length = 535 Score = 117 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 64/424 (15%), Positives = 113/424 (26%), Gaps = 55/424 (12%) Query: 21 DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADM 80 D VV+ G + A +A A+A GV+ G + L + E Sbjct: 27 DPDTAAAVVV---KGLIAACSAAARAEGVRRGQRTRDAQRLAPGLALHARDEAAEA--RA 81 Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 V++ L + +PR E+ A L G D + + GVG+A Sbjct: 82 FEPVLAVLADFTPRYEVVRPGLAALPLEGPARYFGGEDLVVRAIRDRVGEAGIGAGVGVA 141 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALP--VDDVWGIGRRISKKLDAM 198 A LA + R + +++ P V D+ + L + Sbjct: 142 DGVFAASLAARSD-----------TQVVPGRTAEFLASFPTSVLDLP----ELVDPLSRL 186 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 G++T+ LA+ + F R RG + F Sbjct: 187 GVRTLGRLAELPADAMTGRFGAAGVAAHRLARGLDAQPPAPLRQGPD-LAVEAVFDPPAD 245 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS--PFALNEPYYGNSASVKLLTPT 316 + A + A L ++ I + P A E Y LL+ T Sbjct: 246 GSERIVFAAKALADELHAVLAQAGVAGVRVAVEIHGAAGPGAEPEVSYRLWRHEGLLSST 305 Query: 317 QDSRDIINAATRSLDAIWQAG---------------------HRYQKAGVMLGDFFSQGV 355 + + + A+ + ++ Sbjct: 306 AVAERVRWQLSGWQTALQADHQNPDNQNPDTPGVSPETPTADQGITRLRLIPDHLVPARG 365 Query: 356 AQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRS 415 Q L+ N +++ + L A G + + T Sbjct: 366 VQPGLWGANEAP---DRIARAAERLQAMYGPNAVTLPADAGGRSPAD------QGVRTSY 416 Query: 416 SDLL 419 DL Sbjct: 417 GDLP 420 >UniRef50_D0LH57 Putative uncharacterized protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH57_HALO1 Length = 468 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 47/321 (14%), Positives = 96/321 (29%), Gaps = 37/321 (11%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 A + +F P L G+P+ V+ + N VIA + A G++ G + Sbjct: 3 IACVYLPSFPLQAHVRELPHLLGEPLAVVDSSLNGSTVIACSRAAWEEGIRPGMATATAR 62 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSI-DEAFCDLTGVRN------ 112 + V ++ LY + ++ L E+ V+ + G+ Sbjct: 63 AIVPELSVEV--ADPALYERAAAALVEGLLEICEVVDPDGELGTLGLERGGLHRAIYVQA 120 Query: 113 --CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLAN------------HAAKKWQR 158 G +I T+L R VG+A + A +A + Sbjct: 121 PPRMRGDALGHKII-TMLGRHGFRGRVGVADDRFTAYVAAVTVGRGGKVARIDESDTRPP 179 Query: 159 QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF 218 ++ LP+ + I + L G+KT+ D A + + Sbjct: 180 LFHQSFTTVPRGGSASFLAPLPLSFLP-IDDEVQSMLHTCGVKTLGDFAALPPPSVSRAL 238 Query: 219 NVVLERTVRELRGEPCLQLEEFAPT---KQEIICSRSFGERITDYPSMR-----QAICSY 270 + RGE + + ++ + + A+ + Sbjct: 239 HQ--VDFRALARGEGSRTVRGVVRGAQLQHPVVECITLPAPASAQDESDVVGAGNALRTL 296 Query: 271 AARAAEKLRSEHQYCRFISTF 291 R A ++ + + +S Sbjct: 297 CDRVAHRMVARDRAVTGLSLR 317 >UniRef50_A8N619 Putative uncharacterized protein n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8N619_COPC7 Length = 484 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 41/218 (18%), Positives = 80/218 (36%), Gaps = 22/218 (10%) Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 +R V T LTV GIA K LAK+ + K + + + M +L + Sbjct: 1 MRKAVFDETQLTVSAGIAPNKMLAKICSDKNKPNGQFKLEF----EPDSIKAFMHSLSIR 56 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTD--IRFIRKHFNVVLERTVRELRGEPCLQLEEF 240 V G+GR + LD++GI+T D+ I + K F L+ +R G + Sbjct: 57 KVPGVGRVNERLLDSIGIRTCGDIYQQRGVIALMDKRFG--LDFLLRVYLGIASNHVAPH 114 Query: 241 -APTKQEIICSRSFGERITDYPSMRQAICSYAAR-------AAEKLRSEHQYCRFISTFI 292 ++ I R+F +++ ++ + A+ E ++ E + ++ Sbjct: 115 AREERKSIGAERTFSTLDSNHADPKKGSVAIVAKLEEVAEELVEDMKREGWVGKTVTLKY 174 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL 330 K + + + + ++ N L Sbjct: 175 KLDTYQ------TFTRAKQFSKWITTKEELFNTGKELL 206 >UniRef50_Q1YPI9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YPI9_9GAMM Length = 444 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 60/362 (16%), Positives = 115/362 (31%), Gaps = 20/362 (5%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV 95 V+ + AK G++ L ++ E ++ SP V Sbjct: 2 RVLCCSESAKQSGIEPQLSLSTALALCPE--LLTLQRQPEREKTRLQQLALIAYSFSPVV 59 Query: 96 EIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 I + +L+G + T L V +GIA + A+L Sbjct: 60 IID-EKGLWLELSGCEKLFHSYRQLLQQLQTKLLHHCTDVAMGIAGSAYAARLLC----- 113 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 Q G +L + ++ + + +R + +G+ + DL + Sbjct: 114 ---QPGFRCELPQSIELEQQFRRTSLNLLR-VTKRQQQSFQQLGLTYLDDLLALPRAELA 169 Query: 216 KHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAA 275 F + ++ L GE QL+ F P + I + + + R + Sbjct: 170 SRFGTAIVEQLQLLLGEKPCQLKLFNPPA-TFHDLLQSPQGILSKQGLLFPMKALLQRLS 228 Query: 276 EKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 L++ YCR I + +S + L +++ + LD I Sbjct: 229 IYLQARQCYCRKIEWRFEPLIGD------HSSMCITLSGSQNSWSTLLDLSRLQLDRINL 282 Query: 336 AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG 395 G + + DF L+LF D + + ++D+L+A+ G L G Sbjct: 283 PG-SIETIILSTDDFAEGLPEGLDLFGDTSAGEERLETNRLIDSLSARLGPEALQQPVMG 341 Query: 396 IQ 397 Sbjct: 342 DN 343 >UniRef50_B8CNV0 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CNV0_SHEPW Length = 527 Score = 114 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 62/421 (14%), Positives = 132/421 (31%), Gaps = 55/421 (13%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV 95 V+A ++ ++ GVK+G + L +V F + S+ + E S RV Sbjct: 37 QVLALDSLSEQAGVKLGMSLSTAQSLMPSAMLVEFDATIS--QQASDWLCQWSYEFSARV 94 Query: 96 EIYSI-----------------DEA-----FCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 DE +++ + + D E + L Sbjct: 95 VPLRCSLSNEDQKKTSKIKLDVDEFVSNTLLLEVSSMALIFNGIDKLIEQYRQRAKALGL 154 Query: 134 TVGVGIAQTKTLAKL-ANHAAKKWQRQTGGVVDLSNLERQRK-----LMSALPVDDVWGI 187 V + +A+T A+L A HA+ + Q+ S+ + L++ LP+ + + Sbjct: 155 EVSLALAKTPLAAQLLACHASMENQQAKLATEVFSSNDYLNTDKTLLLLNQLPIALLP-L 213 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 + + L +GIK+ L+ + + + F L + + ++ G L P + Sbjct: 214 SDFLKQSLHDIGIKSFASLSALPDKELGRRFGSKLLQLLAKISGRLPQPLSYVEPEE-SY 272 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 + + + + A L+ + + + + Sbjct: 273 QQKLTLLHEVELMQGIVFPLGRMLKEMASYLQLRQLAIQKLKLSLIYRD--SDRSQLDIV 330 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD--NA 365 DS ++N L+ + + + + F V F A Sbjct: 331 IHYPFAEHRSDS--LLNLCRMQLERVTLY-QPVVEMVIHVDKFVPIAVNHDCWFGQQKAA 387 Query: 366 PRPGSEQLMTVMDTLNAKEGRGTLY----FAGQGIQQQW------------QMKRAMLSP 409 SE+ +M L A+ G+G + + + W +++ LS Sbjct: 388 QGQRSEKTQRLMALLEARLGKGKVKGLQASSAHLPEDSWMATELSVTAKEQSIRQQRLSE 447 Query: 410 R 410 Sbjct: 448 A 448 >UniRef50_UPI00019102E2 DNA polymerase IV n=4 Tax=cellular organisms RepID=UPI00019102E2 Length = 109 Score = 114 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 4/108 (3%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSN--NDGCVIARNAEAKALGVKMGDPWFKQK 59 D++ F+A+ E P L P+ + + G + N A+ GV+ P Sbjct: 4 IIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARQFGVRSAMPTAMAL 63 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 L + ++ Y + S V + +E S+DEA+ D+ Sbjct: 64 KLCPHLTL--LPGRFDAYKEASRHVRDIFSRYTSLIEPLSLDEAWLDV 109 >UniRef50_D0WMM1 Putative DNA repair polymerase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMM1_9ACTO Length = 516 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 54/392 (13%), Positives = 109/392 (27%), Gaps = 35/392 (8%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 +P VL G V+ NA A+ LGV+ G + + VV + S Sbjct: 25 DEPAAVLGV--GGVVCANAWARRLGVRTGMRKREALSICPELVVVQRDVRRDALRFESVL 82 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + F VR + + + VG + Sbjct: 83 QAVDAHVAHVV-VVEPGRVIFPARGAVRAAGSMKALAEALIGQIADVAGCEAHVGCGEGT 141 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD-DVWGI-------GRRISKKL 195 A LA + ++E + + V+ + G+ R + L Sbjct: 142 LAALLAAQSD-----------VFLDVEGSAQFLKRTKVEGTLVGVVPSRRAEARSCLELL 190 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 +G++TV DL D + F + + RG + L A T I+C+R F Sbjct: 191 ATLGVRTVGDLTDLGAAAMASRFGEMGSLLWQLARGRD-VHLPAEATTSPGIVCTRVFEP 249 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 + + + A + + + + Sbjct: 250 PLQNVEEAVFSARGLAEELVQVMGVRTAASGRLRIDAVFDDGEELSRSWSVGGGG----- 304 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 +RD+++ L W G + + L + + +A + Sbjct: 305 ---ARDVVDRVRWQLGG-WAGGGPLARLELRLDAASADAAPEPLWGGRSAGNERAAA--- 357 Query: 376 VMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + + G ++ + + + A + Sbjct: 358 AVARIQTVLGEESVRVPRKVGGRTAARRHAEI 389 >UniRef50_Q3SEZ7 Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SEZ7_THIDA Length = 467 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 51/398 (12%), Positives = 98/398 (24%), Gaps = 33/398 (8%) Query: 13 SCETVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 S E R P+ V+ N VIARN A GV+ G + L +V Sbjct: 12 SLEVFTRGSASALPLAVVEKQGNRTWVIARNDPAAERGVRPGMAASAAQALADE--LVVR 69 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 + + + +P V + + D ++ D R + Sbjct: 70 QRDPGDEQAALTGLAAWAGRFTPSVSLQAPDGLLLEVGTCLTLHRGLDNLRARVREGVDA 129 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 + A T A L G + ++ LPV + + Sbjct: 130 MAYSATSACAPTALGAWLLA---------QAGEETAVDANALEARLARLPVG-LLDLSPD 179 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 + LD +G T+ D + + + L + G FAP + Sbjct: 180 TRESLDLVGAHTLGDCLKLPRAGLARRYGQGLLDQLDRALGRLPEPRAFFAPPPR-FERR 238 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 + ++ L + + + G V Sbjct: 239 LELPAPVEHAEALLFVARRLLPELEGYLALRQAGVQALEYVCRHEGRPDTVLKLGFVKPV 298 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF------DDN 364 + + + R + + +LF D Sbjct: 299 RAASR-------MLLLLRETLERTVLPAPVYAVRLRARRLQPLHGSSPDLFQRGEEAGDG 351 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 ++ D + G + A ++ W+ Sbjct: 352 DLLLERLRVRLGRDAV---YGVEAV--ADHRPERAWRR 384 >UniRef50_Q7PXH4 AGAP001404-PA n=4 Tax=Coelomata RepID=Q7PXH4_ANOGA Length = 881 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 8/116 (6%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS---NNDGCVIARNAEAKALGVKMGDPWFK 57 + L D++ FY E P + GKP+ V+ G +IA N A+A GV + Sbjct: 16 VVVLVDMDCFYCQVEEKLNPAIRGKPIAVVQYNPWQGGGIIAVNYPARAEGVTRHMRGDE 75 Query: 58 QKDLFRRCGV-----VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT 108 K + V ++ Y + V L+ +P +E SIDEA+ D+T Sbjct: 76 AKQHCPEIELPQVPQVRGKADLTRYREAGKEVADVLKSFTPLLERASIDEAYLDIT 131 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 87/251 (34%), Gaps = 22/251 (8%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 EIRA V +RT GIA K LAKL K ++ + + KL Sbjct: 202 GASIVNEIRAAVKERTGFECSAGIAHNKILAKLTAGFHKPNKQ------TILPINSIPKL 255 Query: 176 MSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEP 233 LP+ V G+G ++ ++ + IK + +L +++HF + RG Sbjct: 256 YETLPLKKVKGLGGKLGDQVCEVLKIKFMSELVQFPESVLQQHFEQRMGSWMYLMARGID 315 Query: 234 CLQLEEFAPTKQEIICSRSFG--ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + + I C + F IT ++ + A+ E+L + + Sbjct: 316 LEAVTAKFH-SKSIGCCKRFPGKNAITGLATLHHWLNELASEVTERLEKDLDENNRTAKQ 374 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA----------GHRYQ 341 + T ++ S++ + D+ I A ++ + + + Sbjct: 375 L-TVSYSQQIDNVDVSSTRSIALVAYDAERIAADALDAIKRNTERFFASNSTTALHNPIK 433 Query: 342 KAGVMLGDFFS 352 G+ G F Sbjct: 434 FLGISAGKFEP 444 >UniRef50_B8KRW4 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KRW4_9GAMM Length = 474 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 55/376 (14%), Positives = 114/376 (30%), Gaps = 22/376 (5%) Query: 23 WGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSN 82 +PVVV VI N A GV+ + L + A M Sbjct: 21 QEQPVVVFDRER--VICANDPALERGVRPQQNTATVRSLLNEEQGHLLERDTTAEATMLK 78 Query: 83 RVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 ++++ ++P + IY D ++ G D ++ L + ++ + IA+T Sbjct: 79 QLLAWGYGITPTLMIYRDDCLLLEIGGSLTLFHGLDTLLDLIRQALLQRQVSCAMAIAET 138 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKT 202 + A L HA + L + + LP+ + +I+ + GI+ Sbjct: 139 QPGAWLLTHA--------EPTLALDCRRPLNERIGVLPIALIPDFTHQITG-FERAGIRY 189 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 +L + + L R + +L G + + P + FG + Sbjct: 190 FSELLALPAAALGRRGGEELLRWLDQLTGRREIPPVDHQPPS-TFRDALWFGFEVRQQQE 248 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 + A+ + L + + + L + +V+ Sbjct: 249 LHPALKTLLQGFCRFLTHTQLDTQTVDWQL------LRMSGDAQTLTVRSSEAHARWETW 302 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 + LD + A + + + +LF++ E L + D L Sbjct: 303 FELSCLRLDQLTIA-RDIEGVALAVDHLQPNQPLASDLFNNA---RNEEPLNNLTDRLRG 358 Query: 383 KEGRGTLYFAGQGIQQ 398 + G + Sbjct: 359 RLGLRAVTRIAMRDAH 374 >UniRef50_A3WNS1 DinP DNA polymerase-like protein n=1 Tax=Idiomarina baltica OS145 RepID=A3WNS1_9GAMM Length = 471 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 47/386 (12%), Positives = 117/386 (30%), Gaps = 23/386 (5%) Query: 16 TVFRPDLWGKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 +P + PV ++ + ++ N A + G+++G L VV + Sbjct: 18 QRLQPQIQPLPVALVYQEHQKEWLLQCNETALSQGLEVGHSTVLAHTLVND--VVLMPYS 75 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 E + + R+ L + ++ +L + T + L + Sbjct: 76 EEKESRVLTRLAERLYLSVDKQVLFKPQGIAIELDSLLKLYQGTQPLIDHLKEELDTLGV 135 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 + + + + A+ G ++ + LP+ + + +I K Sbjct: 136 SYQMSLGFSARSAQCLA--------CAGIEQLSTDRCVIEHELGHLPIKQLL-LSSQIEK 186 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 +L + GI + L I K F + ++ L+G + F + I Sbjct: 187 RLLSTGIHQLKQLWSLSAADIGKRFGAGMVDDIQRLKGNESQAFDFF-RPRDAFITQLDL 245 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 I + M + + L + R ++ ++ S +KL Sbjct: 246 VTEIQHWQGMLFPLKRLLQELEQFLYQRQKVIRQLTIELQHRD------MEPTSVPLKLA 299 Query: 314 TPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 + + + + +N ++ + + + F +L + + Sbjct: 300 SDSWRASEFLNLLQLQMNR-YPLTAPVIAIEMRALELFELTRDSGSLL--TKGVAHQQTV 356 Query: 374 MTVMDTLNAKEGRGTLYFAGQGIQQQ 399 ++ L A+ G +Y + Sbjct: 357 TELVSRLQARLGEKAVYSPQLSSDPR 382 >UniRef50_A9VB80 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9VB80_MONBE Length = 722 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 64/425 (15%), Positives = 123/425 (28%), Gaps = 74/425 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFY E P+L +P+ V +IA + + KA G+ + + Sbjct: 6 VIIHADLDAFYTQVERQRHPELKDRPLAV--QQWSGLIAIDYKCKAAGIGRHSTVEEARK 63 Query: 61 LFRRC-----GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRD 115 + V+ ++ E Y S +M+ +E+ E SIDEA+ D+T R+ Sbjct: 64 ILPDLACVHVDVINQKASLEPYRQASRDIMAVMEQYG-TFERASIDEAYFDVTQEAQQRE 122 Query: 116 LTDFGREIRATVLQRT-------HLTVGVGIAQTKTLAKLANH---AAKKWQRQTGGVVD 165 ++ T L + + +A + H A Sbjct: 123 AQTPATQLCRHYADLTLLQRGAVELRADLTLEDWLRVAMASTHVMGYAPDDGPDDHLGFG 182 Query: 166 LSNLERQRKLMSALPV-------------DDVWGIGRRISKKLDAMGIKT---------- 202 + L+ + V G +K MG Sbjct: 183 WLPKSEEDALLFHGAMIAAEIRFRVFEETGYVCSAGIAHNKLFAKMGSGFNKPSQQTLYP 242 Query: 203 -----------------VLDLADTDIRFIRKHF-NVVLERTVRELRGEPCLQLEEFAPTK 244 V D + +R F + LRG + P + Sbjct: 243 RASSGDQQYRQAGERLLVADCLGLSLAELRTEFSSETAAWLHGLLRGHDSRAVASKGPPR 302 Query: 245 QEIICSRSFGERITDYPSMRQAICSYAARAAEKL----RSEHQYCRFISTFIKTSPFALN 300 ++ ++S + T + I + A ++ R +++ + K + Sbjct: 303 -SLLEAKSITGQATQLIVVEYWINNLCHGLARRILDDARRHNRWPKNYVLQFKR---RAD 358 Query: 301 EPYYGNSASVKLLTPTQDSRDIINAATR-----SLDAIWQAGHRYQKAGVMLGDFFSQGV 355 Y+G S S + +RD++ A + A G Sbjct: 359 RTYFGASRSCGPVPHI--TRDMVRHAQANPEEGRVQADITEGRELSGVAAGARKDVPLTP 416 Query: 356 AQLNL 360 + L Sbjct: 417 EEQAL 421 >UniRef50_Q7R724 Putative uncharacterized protein PY07765 (Fragment) n=3 Tax=cellular organisms RepID=Q7R724_PLAYO Length = 707 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 80/283 (28%), Gaps = 16/283 (5%) Query: 21 DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADM 80 KPV+ S A+ GV G + + L V S + + Sbjct: 430 SPSPKPVMAGSGWHSASAXAAAQ----GVAPGMALSEAQALCPGLTAV--SRDPXAEQRV 483 Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 + + +P + + ++ G V V G+A Sbjct: 484 LSHLAERCLRFTPWISLDFPATLQLEVRGSLRLFGGPARLAGAARQVCAADGHAVQCGLA 543 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 T A L A + E R ++ L + + GI ++S +L G+ Sbjct: 544 PTPMAAWLLARAGFPAP--------VLETEALRSVLGDLSIAAL-GIDDKLSGRLARAGL 594 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 + + DL + + + L R + E+ G L F + R D Sbjct: 595 RVLRDLWRMPRDGLARRYGSDLLRRLDEVVGSRPQPLGRFHAPPR-FRAERELAMETEDL 653 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 + + + LRS + ++ A Sbjct: 654 TRVFPLVEALLMEFEGFLRSRDAVAAGLELELRXVRAAPTRVC 696 >UniRef50_A3ZPQ4 Putative uncharacterized protein n=2 Tax=Planctomycetaceae RepID=A3ZPQ4_9PLAN Length = 511 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 59/387 (15%), Positives = 115/387 (29%), Gaps = 24/387 (6%) Query: 17 VFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQKDLF-RRCGVVCFSSN 73 + +P+L V+ + V N A++ GV+ G P + + L R + Sbjct: 25 ISQPELAAAMFVLSTETKQGELVRYCNRTARSRGVRSGMPISEVRSLARPRDLLQSEPWR 84 Query: 74 YELYADMSNRVMSTLEELSPRV--EIYSIDEAFC-DLTGVRNCRDLTDFGREIRATVLQR 130 E ++ E S + E E D+TG+ + E L + Sbjct: 85 AEDDKLALQQIALRCERFSFCIGLEDAEPPECLLLDVTGIAHFFGDEQTLAEQLGQSLAK 144 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 L + +A T +A H + K + LP++ + + Sbjct: 145 RRLDGRIAVADTVGIAWAGAHFLAHAGQPAVI--------ASGKRLEVLPIEALR-LPEA 195 Query: 191 ISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICS 250 KL +G+ T+ + D + K L + + G+ + P + Sbjct: 196 TLHKLHRLGVTTIGQVLALDRASLAKRCGKSLLMRLDQWSGQLPEMITPCRPLPK-FQVD 254 Query: 251 RSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASV 310 + E IT + Q R L R + + S+ Sbjct: 255 QRLEEGITQPAPLEQLWQLLLKRLLGLLTPRRLGVRQLLCLVNMEN------RQTWETSL 308 Query: 311 KLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGS 370 +L D R + R + + + + AQ + + Sbjct: 309 RLCEAVADERRL-GELLRLKLEKLRLTAPLVRMTLDASEVAPLSAAQQDWLAGRSQDEAR 367 Query: 371 EQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 QL ++D L+ + G + A + Sbjct: 368 -QLAKLVDRLSCRLGDQAIGVAQLSPE 393 >UniRef50_B2B126 Predicted CDS Pa_3_8130 n=2 Tax=Sordariales RepID=B2B126_PODAN Length = 575 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 43/356 (12%), Positives = 97/356 (27%), Gaps = 86/356 (24%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA C P L P+ + + N A+ GVK + K Sbjct: 23 VILHFDLDCFYAQCIENANPHLKSVPLGI--KQKSILATCNYVARKHGVKKLMGIQEAKR 80 Query: 61 LFRRCGVV-------CFSSNYELYA-----------------DMSNRVMSTLEELSPRVE 96 L + + ++Y+ ++ V + V Sbjct: 81 LCPDLVLADGEDLSPFRDVSKQIYSLLKSYSWNGRVERLGLDEVFLDVTDVVAYNLGLVN 140 Query: 97 IYSIDEAFCDLTGVRNCRD-----------------------------------LTDFGR 121 + ++E++ L+ R + Sbjct: 141 HHCLEESWFCLSREDPERGFAFDAREVEGCVWPPDFVSDRENEGTDSLRLRLLFGSHLAF 200 Query: 122 EIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPV 181 +R + + T GI+ K LAKLA K + L + + LP+ Sbjct: 201 YLRQQM-EGLGYTSACGISTNKLLAKLAGDRNKPRNQT-----TLLSSHSPLPFLDPLPL 254 Query: 182 DDVWGIGRRISKKLDA----------MGIKTVLDLADTDIRFIRKHF--------NVVLE 223 + GIG + + + + + + + + + Sbjct: 255 RKIPGIGGKTITAMKSLLKTDDDDDGLTVHNARTNPAVSPFALERLLAGSGSGGEKGIGQ 314 Query: 224 RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 + L G +++ ++I ++ +T +R + ++ Sbjct: 315 KVWLLLHGIDGSEVKPTMDVPRQIGIEDTY-RGLTQLSQVRAGLVQITTSLLRRMH 369 >UniRef50_C8RUC9 DNA polymerase involved in DNA repair n=2 Tax=Corynebacterium jeikeium RepID=C8RUC9_CORJE Length = 610 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 46/337 (13%), Positives = 96/337 (28%), Gaps = 24/337 (7%) Query: 14 CETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 + R P V+++ V+A NA A+A G+++G + + V + Sbjct: 31 VQAQSRGWDVLAPAAVIADYR--VLACNAAARAQGIRIGMKQRHALAAYPQLNVAAD--D 86 Query: 74 YELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 A + V++ L+++S VE + + E R H Sbjct: 87 PTRQASVHEDVLAALQDVSAVVETLRPGLLAFPVDALARYYGDEANAVEKLLDAAARLHA 146 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV-----WGIG 188 G+A A A K + + ++ LP+ + Sbjct: 147 DCLAGVADDLVSAVWAARLGKS-----------IPVGGGAEFIAGLPISVLSIEPELRAP 195 Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEII 248 +S L +G++T+ D A + F R G + ++++ Sbjct: 196 AHLSATLQQLGLRTMRDFAGLPRADVAARFGQEAVEWHRIASGHVDRDVAP-RRQREDLE 254 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP---FALNEPYYG 305 E I + A KL + + C ++ P + Sbjct: 255 LRYEADEPIARTETAAFIARHVATALHNKLFAAGEACLRLAVRAYLEPPVGYTGPTVIER 314 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 + L+ ++ + L + Sbjct: 315 LWRCREPLSEQDTAQRVRWQLDGWLTRLRARAGTISG 351 >UniRef50_UPI0001C31AE4 hypothetical protein Cwoe_4251 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31AE4 Length = 395 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 65/413 (15%), Positives = 113/413 (27%), Gaps = 24/413 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLS--NNDGCVIARNAEAKALGVKMGDPWFKQ 58 M F + R +L P + + V + A+A GV+ G P + Sbjct: 1 MVVCTLFPRFQLTVAAGDREELLRAPAALAPEAGREARVGEVSLAAEAFGVRPGMPLGEA 60 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD 118 +V + AD R++ LE + VE A G+ T Sbjct: 61 LARCPGLALV--PPDPAGVADAWERLLVRLESIGAAVEPERPGLACFQAQGLVRLHGGT- 117 Query: 119 FGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSA 178 + A +G ++ AA R + L + R ++ Sbjct: 118 -LERVLAAARTALRHPARIGTGPSRF----CALAAATRARARKPQIVLGDERTARDYLAP 172 Query: 179 LPVDDVWGIGR--RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQ 236 LPV + G + + L +G++T+ +LA + F +G Sbjct: 173 LPVALLRGREETAALPEPLARLGVETLGELAQLPRAAVADRFGAPGLLAWELAQGRDGAL 232 Query: 237 LEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 P + E T A+ R + + + R + Sbjct: 233 RPRELPERIEEELELPEALAGTQLD---HALGLLVDRLLARRERDGRTLRAVVLAATLVE 289 Query: 297 FALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVA 356 V D + A T L + R + V G S Sbjct: 290 G------GTWREQVPFREALADPARMRLALTPRLALLPAPAERLRLTAVRFGAVASDQ-- 341 Query: 357 QLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSP 409 +L D+ + V A L + +RA+L+P Sbjct: 342 -RSLLDEAETARRARLREGVRQARAAAGPDAALRVLAVDPDSRVPERRAVLTP 393 >UniRef50_A9UR36 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UR36_MONBE Length = 265 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 60/199 (30%), Gaps = 44/199 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA V P+L KP+ V N A+A GV + + Sbjct: 4 VILHFDLDCFYAQVHMVQEPELRLKPLGV--QQKTIFATVNYVARARGVPKMARISEAQR 61 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSIDEAFCDLTGVRN------ 112 + V+ + Y + S + + L+E P VE +DE F D T + Sbjct: 62 ICPDI-VIRNGEDLTDYREASEHIFAFLQEQFPHCPVERLGLDEFFVDATTPAHALCSDG 120 Query: 113 ---------------------------------CRDLTDFGREIRATVLQRTHLTVGVGI 139 R R + + T GI Sbjct: 121 FWSPTPHFHLTASPNWCGHPAAHAAANLAQYQALRAGAQLTDWARKELKAKFGYTCSAGI 180 Query: 140 AQTKTLAKLANHAAKKWQR 158 A K AK+A K + Sbjct: 181 AVNKLQAKMAGELHKPDDQ 199 >UniRef50_B5EJ93 Putative uncharacterized protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJ93_ACIF5 Length = 470 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 51/390 (13%), Positives = 106/390 (27%), Gaps = 25/390 (6%) Query: 14 CETVFRPDLWGKPVVVLSNND--GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 E R + ++ G ++ NA A G++ G + + + + Sbjct: 13 VELRERVQAEAAALALVDMQGSAGTLLQVNATALQAGLRTGMTTARALAMLPELQL--CT 70 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSI--DEAFCDLTGVRNCRDLTDFGREIRATVLQ 129 + + L L+PRV + D++G R + + A Sbjct: 71 RDPAAEVQALSHWARLLYSLAPRVVLLEEMSPALAVDISGNTRLRQDDTLLQ-VVAAWAA 129 Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR 189 T L+V G+A T A L Q L +P+ + Sbjct: 130 ATRLSVRTGVAPTPLGAALLAQW----QGAGSRSGSCLEPTDWALLWPQIPITLLP-CAV 184 Query: 190 RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 L A+G++ L D + + + L G + Sbjct: 185 ATRAALLALGVRHCAQLQALDRADLVRRLGPESLHVLDRLSGRIDDPRPALSFPVD-PEV 243 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSAS 309 S + I + +R A+ LR++ Q R + S++ Sbjct: 244 SIPLYDEIRHWEGLRFALHRALQDLQLLLRTQAQASRSWLLQL-------QGRERQWSST 296 Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPG 369 +++ PT + ++ L + Q + D Sbjct: 297 LEVRDPTTNVETLLTLWQWRLQQ-QPLDFAVHTLHLQALAPQHWPGRQATWWQDGVEEAR 355 Query: 370 SEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 +++ L + G ++ + Sbjct: 356 W----QLVEQLRQRLGDVAVHAVAGVADHR 381 >UniRef50_Q7UJH7 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UJH7_RHOBA Length = 552 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 57/398 (14%), Positives = 115/398 (28%), Gaps = 53/398 (13%) Query: 37 VIARNAEAKALGVKMGDPWFKQKDL-------------------FRRCGVVCFSSNYELY 77 + A A A+GV++G P + D+ + + Sbjct: 1 MAASCQRAAAMGVRLGMPIAQAVDITTTLADQHNSGRNVANQSVPPIPTAIIDEHDRVAD 60 Query: 78 ADMSNRVMSTLEEL-SPRVEI-------------YSIDEAFCDLTGVRNCRDLTDFGREI 123 + + + L+ P++ + + + ++ GV + D Sbjct: 61 RRALHSLATELQSHLCPQIALETLDRFKWAGRFRHDPEALVAEIDGVTHLFDDEPGLLAA 120 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAK-----KWQRQTGGVVDLSNLERQRKLMSA 178 AT+L+R HL + IA T A A K + L+ R R + Sbjct: 121 AATILKRRHLNARLAIASTLGAAWALATHAPSQTRTKDPAKNHFDFFLAPANRTRDALQT 180 Query: 179 LPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 LP + + + L +GI+T+ L + L + + GE + Sbjct: 181 LPPSALR-LNPTDVETLQRLGIETIGSLLQLPRSGLATRIGHGLCNRIAQALGEVDEPIL 239 Query: 239 EFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFA 298 E S +R I A LR + + I F Sbjct: 240 AIDIPT-EHTASLELEYPTDAVDLIRDRIIRLIESATASLRPLGRGVLRLRCQI---DFT 295 Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 + + L +PT D + N + ++ + + Q Sbjct: 296 ESP---SVTLESGLFSPTLDLNHLSNLMIGAFESHACQSK-VSHLRLDVLQDAILASTQP 351 Query: 359 NLFDD------NAPRPGSEQLMTVMDTLNAKEGRGTLY 390 ++F + ++D+L+ + G ++ Sbjct: 352 SIFGPGFESDTQTDWTRQTDIARLIDSLSGRLGEESVR 389 >UniRef50_Q6NJ12 Putative uncharacterized protein n=1 Tax=Corynebacterium diphtheriae RepID=Q6NJ12_CORDI Length = 508 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 55/365 (15%), Positives = 99/365 (27%), Gaps = 22/365 (6%) Query: 24 GKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 + V+++ V NA A+ G++ G L V+ + E + R Sbjct: 25 HRAVMIVDQRRVMV--CNARARKAGIRRGMLVKHALAL--DENVMMVPYSPERDTRVFER 80 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 ++ +++++ VEI D+ G + E V ++ + VGIA Sbjct: 81 IVRDIDQVAANVEIARPGIVLIDVQGAGAFHGSEEKAAEKIMDVTSKSGMESFVGIADDI 140 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTV 203 A +A S L V++ L G+ T+ Sbjct: 141 PTAIIAARRNAVVPLDGSVRYLDSQPTEL------LRVEEALECDPDTVAHLQTCGLTTL 194 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 D+A +R I F + + S + + IT Sbjct: 195 GDIARISLRDITTRFGPRGHHCWTIATAQTQRTMSTPTSEID-HSVSITPEDPITRIDEA 253 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI- 322 A A +L + C I + D Sbjct: 254 FF----LARSLATQLHNAGLTCHR--IKIIAVIGNQAHERTWRTRGDLSDHAISDRVRWQ 307 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 + A S+ + + +Q L+ N SEQ M + + A Sbjct: 308 LEAWLASVPEGIDDSVGIVQLTLRPY--ECMRPSQPQLWGTNKSDEESEQRM--IARVQA 363 Query: 383 KEGRG 387 G Sbjct: 364 LVGPE 368 >UniRef50_UPI0001BC2B48 hypothetical protein BlinB_00220 n=1 Tax=Brevibacterium linens BL2 RepID=UPI0001BC2B48 Length = 568 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 75/439 (17%), Positives = 134/439 (30%), Gaps = 78/439 (17%) Query: 12 ASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 A+ E F P PV VLS G V+A NA A+A G+ +G+ VV Sbjct: 35 AATEHEFSPR---TPVAVLSG--GKVVAANAPARAAGIALGNNKRAVGYRCPEAQVVA-- 87 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN-CRDLTDFGREIRATVLQR 130 N E + + LEEL R + S L +++ D + + ++ Sbjct: 88 WNEETDNRHFSAGVGALEELVARFTLLSPGTLAIPLDSLKHGYADEPSAVEALISALVAA 147 Query: 131 THLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR- 189 T GIA T A LA A++ + ++A P+ + G Sbjct: 148 TGWEFFPGIADTVFAAVLAAGQARR-----------VEPGETAEFLAAQPISTLEYAGAG 196 Query: 190 --RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 + +G++T+ DLA D+R + F + + G L + ++ + Sbjct: 197 ATELIDTFTQLGLRTLGDLAGIDVRAVNSRFGTLGKHAHDLATGVEWAPLNDHVREEK-L 255 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 E T ++ AA +R C I+ + ++ + Sbjct: 256 TVELGLDEPTTRSDTLGFLTRQLAADLLTTVRRRGLVCTQITIELIAVSGQSSKRTWRIE 315 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAG------------------------------ 337 + T + + A L + G Sbjct: 316 ---DMNENTI-ADRLRWQAEGWLAGSTRKGPASPQQGSTPSRTSSKNRKDSRHSKDRETP 371 Query: 338 --------------HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 G++ + + A +LFD+N Q+ ++ L Sbjct: 372 APDEPGPDPEDFSEEGIIALGLVAAELTTPIGATRSLFDENTG-----QVTHTLERLQGL 426 Query: 384 EGRGTLYFAGQGIQQQWQM 402 G + G+Q W Sbjct: 427 FGPDAVL--VPGLQGGWDP 443 >UniRef50_Q15ZX1 Putative uncharacterized protein n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15ZX1_PSEA6 Length = 484 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 50/387 (12%), Positives = 114/387 (29%), Gaps = 25/387 (6%) Query: 19 RPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA 78 + P+V+L G V N A+ G++ L G+ N E+ Sbjct: 36 HKSISSIPIVILDTAHGIV-QLNKCARQAGIQPFMSLGTAAAL--HGGLQVMPFNPEIEK 92 Query: 79 DMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVG 138 + + L + + +S + + + + + L +++ Sbjct: 93 QQLSIIAQRLYMVVSDICFFSEQGLLLRVHNMLRLYSSLNELWSMIKSQLVPLNVSFSYA 152 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 + AKL G + + + + + + + KL+++ Sbjct: 153 TGHSPLAAKLLAV--------KGWNQITDEPAAIQHALKKVDLS-LTELSSKDVTKLNSI 203 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 G+KTV L + K F+ + + +LRG+ + F P I Sbjct: 204 GVKTVEQLLIIPFSDLHKRFDTQMITYLGQLRGDFKHPVIFFHPQA-NFKQYIELLYEIE 262 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 + + I + L + + + + + ++ + + + Sbjct: 263 RTDLLLKPIQKLLSNLENFLLLRDELTQELRIIL----YQRDKSKIEFTVRAQQGEY-RA 317 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMD 378 + A + + G F + + +LF QL + Sbjct: 318 KDWLGLLALKL--ENVLLNAPIIALQLSTGKTFVRHPDKQDLFLGKQGVVSRLQL---IS 372 Query: 379 TLNAKEGRGTLYFAGQGIQQQWQMKRA 405 L AK G L+ ++ +RA Sbjct: 373 ALQAKLGDDVLF--SPQTINDYRPERA 397 >UniRef50_Q6A779 Nucleotidyltransferase/DNA polymerase involved in DNA repair (UmuC) n=3 Tax=Propionibacterium acnes RepID=Q6A779_PROAC Length = 530 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 60/404 (14%), Positives = 116/404 (28%), Gaps = 27/404 (6%) Query: 19 RPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA 78 R P+++ G VI A A GV G + V + Sbjct: 28 RLHPGDAPLMIAD--RGVVIDCCARAAEEGVIPGLRVRAAQLRCPEG--VVVPYDSASEE 83 Query: 79 DMSNRVMSTLEE-LSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL-TVG 136 + + V+ +E+ ++P V + A GV E VL VG Sbjct: 84 VLFDEVVREIEKSVAPSVHVVRPGVAAVAARGVARFYGDEVAAAERMVNVLTHIGYSHVG 143 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR---ISK 193 V +A A++A + R ++ V + GR + + Sbjct: 144 VSVADGLFAAEVAATD---NSGEGKRAPVFLASGTSRAFLAPYDVSVLARTGRADGELVR 200 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 L +G+ T+ AD D + + + F +R RG L P + F Sbjct: 201 TLRQLGLTTMGAFADLDRQHVVQRFAGAGQRAHDWARGMDVTMLSSRRPQDDD-AMEVVF 259 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 + + + +L + C + ++ + + Sbjct: 260 DDPEPSGAQVVAKVRPVVEEFMTRLAETGRVCSQVRILLRATTGFSEHTWRQ-------- 311 Query: 314 TPTQDSRDIINAATRSLDAIWQ-----AGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP 368 D++ +R L + + + ++GV + Sbjct: 312 PWQFSGDDLLARLSRQLSDLPRGTDEFGADEFCQSGVQAVRIVPTIHRAGEAAEGLFGAR 371 Query: 369 GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYT 412 +E L+ V+ L + G + + + R L P T Sbjct: 372 PTEHLVHVISQLQERLGPEGVLVG-EVAGGRMLKDRRRLVPFGT 414 >UniRef50_Q5P4A3 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5P4A3_AZOSE Length = 475 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 51/384 (13%), Positives = 109/384 (28%), Gaps = 27/384 (7%) Query: 28 VVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMST 87 V+ ++A A+ GV++ + +V + L A + + Sbjct: 28 VIEPQPRATIVAATTAARVRGVELRQGVAGALAVVPE--LVLRERDPALEAATLAELATW 85 Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 + V + D + + D + A LT + A T A+ Sbjct: 86 AGRFTSCVSLDPPDAVLLEASASLRLFGGIDGLAQRIADAALPLGLTTTLAAAPTPLAAR 145 Query: 148 LANHAAKKWQRQTGGVVDLSNLER-QRKLMSALPVDDVWG---IGRRISKKLDAMGIKTV 203 L + ALP++ + + + L +G++ + Sbjct: 146 WLAR---------VRPGTLVRPSNGWAGALDALPIELLADGAPVPPATLELLRGVGVRRI 196 Query: 204 LDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSM 263 +LA + + V+ TV RG F P ++ + + Sbjct: 197 GELARLPRDGLARRDASVVTDTVARARGREPDPRPRFVPAER-FASRLVLPASVAHTEPL 255 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDII 323 R A + A L + ++ + P +D+ + Sbjct: 256 RFAAGRLFSNLAAWLAARQAGLDCCRLHLEHD------CAPATVVEIVTGRPQRDAARFV 309 Query: 324 NAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAK 383 A+ L A+ + + + +LF E + ++D L+A+ Sbjct: 310 QLASEHLAALVLP-APVEALRLTADTPVALPAGTPDLFGGKDD--AREAALRLLDRLHAR 366 Query: 384 EGRGTLYFAGQGIQQQWQMKRAML 407 GR + + +RA Sbjct: 367 LGRDAVRTVLPVADHR--PERAWR 388 >UniRef50_C7R3Y5 Nucleotidyltransferase/DNA polymerase involved in DNA repair n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R3Y5_JONDD Length = 549 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 50/397 (12%), Positives = 106/397 (26%), Gaps = 32/397 (8%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 P + +S + A +A A+A GV+ ++ + L A Sbjct: 16 PPHTPAITVSGTR--ITAASAFARAAGVRTTMALRHAQETLPTLTCLPTPPTDIL-AREH 72 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIA 140 R+ L+ + + + G D F + + T + GIA Sbjct: 73 ERIAQVLDSFLAHLTVLRPGLTLAPIDGALRHYPDPPTFLAAVTDAITDTTGIDPWAGIA 132 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDV------WGIGRRISKK 194 A LA + + + P+ + ++ Sbjct: 133 NGTLPAILAARRG-----------RILTPDESLPFIQTHPLHTLRYTTTAPTPDPELTDL 181 Query: 195 LD---AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 L +G+ T DLA I F G L + +I S Sbjct: 182 LALWAKLGLHTYADLASLPPTDIATRFGARGMWAYHIAIGR-EEPLVSQDRNEPDITVSS 240 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 +F E + + A++ E+L + + +T+ L + + V Sbjct: 241 TFDEPLHRADTAAFYAKQLASQLREQLVKQGLSAYELRVSARTNERILTRTWRADPTMVG 300 Query: 312 LLTPTQDSRDIINAATRSLDA-----IWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 L+ ++ + L A + G L+ + Sbjct: 301 ALSEHAITQRVRWQCDGWLSASAICPHTPKVGPLDMVELTAVRVIPAGHHHPTLWGADNT 360 Query: 367 RPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 + +++ L++ G + + + Sbjct: 361 DNDHTR--RLVERLSSLVGPDGVVVPRITGGRTPADR 395 >UniRef50_C5BND7 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BND7_TERTT Length = 513 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 47/393 (11%), Positives = 102/393 (25%), Gaps = 51/393 (12%) Query: 33 NDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 V+ + A A G++ G P + L ++ L N + L + Sbjct: 35 QKQRVLCASKPAVADGIRAGMPAATAQLL---GQHQQVERDFALETTALNALADRLYMFT 91 Query: 93 PRVEIYSID-----EAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 P + +++ E L T + +G+ T A Sbjct: 92 PHLTPLQPAAHLQAGILAEISRSLALFKGLTTLVEQLKENLADTGYELALGLGHTDLCAW 151 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK------------L 195 L + + Q + ++ L V V +G + L Sbjct: 152 LLSWSPTPQPIQHYTQ---------SQFIAQLDVMPVRQLGECHCAQLPYTQLQNRIDDL 202 Query: 196 DAMGIKTVLDLAD----TDIRFIRKHFNVVLERTVRELRGEPCL--------QLEEFAPT 243 + G T+ DL + +R+ + + ++ G Sbjct: 203 EKSGFNTIADLTRQIGNQNTSSLRRRWGGEFCGLLSQVLGIEHSLQQTRLFATPLPQYQP 262 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 +Q S F + + Q + L ++ C+ + + Sbjct: 263 EQFFYDSIQFDYPLQTVEQLLQPMEYLLNNLQRYLNNQQLQCQKVEWLLFDIYHNKQTFK 322 Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL-FD 362 +S + D+ ++ + L+ + ++ D F L F Sbjct: 323 VHSSHAQ------NDAALLLELSRIQLETQSLS-FEVDTVELICRDTFKHTPNTDPLGFT 375 Query: 363 DNAPRPGSEQLMTVM--DTLNAKEGRGTLYFAG 393 + + L A+ G L+ Sbjct: 376 QHESNAREMAHDFAIVTAKLKARLGDQALFKVA 408 >UniRef50_A8B5P1 DNA damage repair protein n=2 Tax=Giardia intestinalis RepID=A8B5P1_GIALA Length = 867 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 104/278 (37%), Gaps = 25/278 (8%) Query: 18 FRPDLWGKPVVVLS-------NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCF 70 R L G PV++ + N+ ++ AK +G++ G + + Sbjct: 277 ERTRLIGAPVIIANQFDSKEANDGAIILDCTKAAKQMGIESGMTVGEAFERCP--TTQVL 334 Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC-----RDLTDFGREIRA 125 S + ++Y + L + S + + +EA DL+G + G +++ Sbjct: 335 SYDTKMYNTKGQELFKVLGQFSKAIMPMNYNEAVLDLSGHVSLSAANGNSCLALGLQLQQ 394 Query: 126 TVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 VLQ T L +G + A++A A + R L+ P+ + Sbjct: 395 RVLQETGLHCSLGFGDSLFAAQIATKLAGSNGIFSATSSTC------RTLLINRPLSFLP 448 Query: 186 GIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPT 243 G+ + ++ + +GI ++ I I + +V ++ + L+G + F P Sbjct: 449 GLSSEVEQQFAEQLGITKCGEILSAQIGDICQIISVDQAKQLISMLKGRTDDASKGFFPV 508 Query: 244 KQ---EIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 + + + F + +++ + +++A +L Sbjct: 509 RTEGLQPRARKLFLNTLESKQIHKKSTETLSSKALRRL 546 >UniRef50_C7RN50 Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RN50_9PROT Length = 497 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 37/352 (10%), Positives = 95/352 (26%), Gaps = 18/352 (5%) Query: 51 MGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV 110 G + + + R+ + + + ++ G Sbjct: 45 PGLRVAEAWAFLP--ALAIQERDAGRERAALTRLACWAGGFTSEICVLPPQTLLLEVAGS 102 Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 E T + T +A T A+ G + + Sbjct: 103 LRLFGGVAPLFERIVTGCREQGFTSWAALAPTPLAAQWLA--------FAGDREPCLDAD 154 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 + + + LP+ + + + +L + G+++V DL + + + Sbjct: 155 QLPQRLGRLPLAVL-DLSAQSRARLASFGVRSVADLLRLPRAGLARRLGADFAADLARAL 213 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 GE F ++ R+ + ++ A L + + Sbjct: 214 GELPDPRARFVFPER-FSEQLELPMRVENATALGFAGRRLITSLCGWLAA--RRGGISEC 270 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 + + ++ T+D+ I L + + + Sbjct: 271 LFEFAHERGARQRSATVLVLRFAGATRDAERIARVLGEHLQRLELPAAA-ELISLRAEAP 329 Query: 351 FSQGVAQLNLFDD---NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 + +NL + A G E L +++ L A+ G G+++ + + Sbjct: 330 EALPGHTVNLLGEYGGGAGGAGGESLAALVERLQARLGSGSVHALSAVAEHR 381 >UniRef50_A9FIX7 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FIX7_SORC5 Length = 621 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 62/442 (14%), Positives = 120/442 (27%), Gaps = 64/442 (14%) Query: 20 PDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYAD 79 P +P + + EA+ GV+ G + L + + Sbjct: 49 PQPEREPQA----PAAVIDVVDDEARRYGVRPGQKVVEAAALV--AHLAIHRVTFAEIDA 102 Query: 80 MSNRVMSTLEELSPRVEI--------------------------------YSIDEAFCDL 107 RV L I D + D+ Sbjct: 103 ALGRVAEVALGLGATAAIQLGEQGAPRAGAARASRAPERAASEARSPWGDGPYDTVWLDI 162 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLS 167 TG + + + + IA LA+ G ++ Sbjct: 163 TGASHLVGGEEALLGELGERVAALGHRARLAIADGPRLAQALARFGAHADGGGGAEAPIA 222 Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 + + + LPV + + R ++ L +G+ V DLA + + Sbjct: 223 PPGKGAQAIGPLPVQALP-VEREVASFLVRLGVLRVEDLARLPRAQVAARLGPRTADVME 281 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRF 287 L G + L F + + F E I S+ + +R A +L + + C Sbjct: 282 LLAGRDPVPLLPFEVPR-LLEEEVLFDEPIESAESLLFVLRGMTSRIASRLAARGEACGR 340 Query: 288 ISTFIKTSP------------------FALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 ++ I + V + P D+ D++ Sbjct: 341 LNVAIAYDRSIARLRLGEREDDGAAALLEDDGRGPSLRFHVDMPVPLSDAGDLLRPLKAR 400 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 L+ I A GV + ++ L + L ++ L+A+ G+ + Sbjct: 401 LERIELAAPAV---GVHVIASRIARARRVQLDLSRDRSVDPDSLPALLAELSAEIGQERV 457 Query: 390 YFAGQGIQQQWQMK-RAMLSPR 410 I + + R+ L P Sbjct: 458 --GILEIADAHRPEARSRLVPA 477 >UniRef50_A6SZA5 Uncharacterized conserved protein n=3 Tax=Oxalobacteraceae RepID=A6SZA5_JANMA Length = 504 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 51/403 (12%), Positives = 113/403 (28%), Gaps = 25/403 (6%) Query: 13 SCETVFRPDL-WGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 SCE PD P+V+ N A+ G++ G + L G+ Sbjct: 25 SCE----PDPFADAPIVIC--ERQVAGWCNQLAEDAGIRAGMSEASARALA--AGLQTLQ 76 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 + +P V + D ++ L Sbjct: 77 RDTGQETKALQEAALWCLHFTPHV-VLKPDGLLLEVGASLRLFGGHQRIATQLLGGLLEL 135 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 L + A T A L + G ++ + + LP+ + + Sbjct: 136 GLQARLASAATAGAAWL-------RAQSDGISKVFAHDGDINEALDPLPLHVL-DSAQAH 187 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 LD +G + + +L + + F L + G F Sbjct: 188 LDTLDGIGCRRLGELRQLPRAGVARRFGQALLSELDRAYGTEAEAHLWFEAP-VIFDVKL 246 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 R+ + ++ A + L + H I+ + + + + ++ Sbjct: 247 ELPARVENTEALLFAARRLLLQLTGWLSARHAAVAGITLCLHHES-SRQRDHRRTNVNIM 305 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 L P++D + L + + + +Q LF + +E Sbjct: 306 LGMPSRDIDHLALLLRERLAQLELI-APVIEISLKAEQITAQAAPNTELFPTPSS--DAE 362 Query: 372 QLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTR 414 +++ L ++ G + + +++++S TR Sbjct: 363 NTGRLVERLQSRLGHEAVRQLSVFADHR--PEKSVMSSVLNTR 403 >UniRef50_B7FSY6 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FSY6_PHATR Length = 531 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 54/406 (13%), Positives = 106/406 (26%), Gaps = 98/406 (24%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FY CE + R +P + ++ N A+ +GV + Sbjct: 64 VIIHLDIDCFYCQCEKLDRNLADDRPFAIGQ--KHIIVTCNYAARKMGVGKLESRESAIR 121 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR-------VEIYSIDEAFCDLTGVRNC 113 ++ S+ E Y V + V S+DE DLT V Sbjct: 122 KCPSL-LILEGSDLERYRVYGRNVYMAFRRACQQLGGKKMAVCKGSMDEMMVDLTHVDFL 180 Query: 114 RDLTDFGREIRA------TVLQRTHLTV-GVGIAQTKTLAKLANHAAK------------ 154 + + G + + T LT G T K A+ K Sbjct: 181 ANTRENGNSLDQVYVYGSRSGEATTLTEDQTGATATVVYDKTASRDTKETRLVRKQYFEA 240 Query: 155 --------------------------------KWQRQTGGVVDLSNLERQRKLMSALPVD 182 + V++ +L++ +P+ Sbjct: 241 ASMALAIQNQILEQTGFTTTLGVSNSPMLAKIASGLRKPATVNILYPWDATELLAGMPLR 300 Query: 183 DVWGIGRRISKKLDA-----MG------------IKTVLDLADTDIRFIRKHF------- 218 V G GRR+ L G T DL + + Sbjct: 301 KVSGFGRRMMYALHPSLESYYGSLIPTARSKSSPCWTCSDLLRIPVEEVASCLCTVNGLE 360 Query: 219 ---NVVLERTVRELRGEPCLQL-EEFAPTKQEIICSRSFGER-ITDYPSMRQAICSYAAR 273 + V + + +G ++ ++ + + SF + + + S R Sbjct: 361 EKASHVALELLEKCKGIDSSKVIDDDGGLSKTVSVENSFRRGTVRTLNDLNHELLSLCKR 420 Query: 274 AAEKLRSE--------HQYCRFISTFIKTSPFALNEPYYGNSASVK 311 L + R + ++ + +S + Sbjct: 421 LPRLLDERLNCSPFPKRAFPRTLRVTVRFVSSLRQQDDKAHSHTRS 466 >UniRef50_C5CKZ3 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CKZ3_VARPS Length = 445 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 37/335 (11%), Positives = 86/335 (25%), Gaps = 24/335 (7%) Query: 71 SSNYELYADMSNRVMSTLEELSPRVEIY----SIDEAFCDLTGVRNCRDLTDFGREIRAT 126 + + + + + + + +PRV + +L E Sbjct: 12 PDDPQPRTEALDGLATWCLQFTPRVAVLEALLPCPAVVMELEQSLRLFGGKRRLVERVRE 71 Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWG 186 + + A T A A +L+ ALP++ + Sbjct: 72 ECPDLGVR-QLSWAPTSLAALAVARAGLSNGFAKP----------LAQLLDALPIETLTQ 120 Query: 187 IGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQE 246 + L +G +T+ + + + F+ L T+ + G + Sbjct: 121 VA-AHQATLARLGCRTLGQVRALPRGGLSRRFDAQLLATLDQAYGLRPETYSWAQLPE-T 178 Query: 247 IICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 R+ P+M + A L + + G Sbjct: 179 FHAKLELMARVEHAPAMLFGARRLMLQMAGWLMARRSGVTAFTLRWCHDAMRARTAGDGG 238 Query: 307 SASVKLLTPTQDSRDIINAATRSLDAIWQ--AGHRYQKAGVMLGDFFSQGVAQLNLFDDN 364 +V+ T+D+ ++ L + + + +L Sbjct: 239 ELTVRTAQATRDTEHLMRLLAEHLGKVELLAPVGDLELLATEVQSLEE-----KSLSMLP 293 Query: 365 APRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ 399 R E L V++ + A+ G + + Sbjct: 294 EARQSGESLALVLERIAARLGPDRVLRPVILEDHR 328 >UniRef50_C3KFQ7 Putative ultraviolet light resistance protein B n=2 Tax=Pseudomonas RepID=C3KFQ7_PSEFL Length = 179 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 61/131 (46%), Positives = 80/131 (61%), Gaps = 2/131 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +F+L D N FY SCE +FRP+L GKPVVVLSN+DGC++A EAK LG+KMGDP+FK + Sbjct: 9 VFSLVDANKFYCSCERIFRPELRGKPVVVLSNSDGCIVACTNEAKELGLKMGDPYFKIRA 68 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG 120 R GV FSSNY LY ++S+R+ L VE YSID+A + + R Sbjct: 69 FLERNGVAAFSSNYTLYGELSHRMAMATASLVSAVEQYSIDDALGYVLSLNLYRRQLTVA 128 Query: 121 REIRATVLQRT 131 + RA + Sbjct: 129 Q--RALIAAEL 137 >UniRef50_C5JEX9 Sister chromatid cohesion protein n=2 Tax=Ajellomyces dermatitidis RepID=C5JEX9_AJEDS Length = 757 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 96/306 (31%), Gaps = 22/306 (7%) Query: 106 DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 D V D R +RAT+ +R T GIA+ K +AKL + K ++ Sbjct: 309 DWDDVCMLIGA-DIVRSVRATIWERLKYTCSAGIARNKMMAKLGSACNKPNKQ------T 361 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFN-VVLE 223 + ++ + + +G ++ K++ A G V L + +R Sbjct: 362 IVRNRAVQQFLGGFKFTQIRMLGGKLGKQVAAIFGTDEVGGLLHVPVEQLRLKLGDDTGT 421 Query: 224 RTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 LRG ++ + ++ ++SF I + + + A +L E Sbjct: 422 WLYELLRGYEYSEVS-VRTQIKSMLSTKSFRPGIQSSTQAEKWLRIFVADIYGRLLEEGV 480 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRD---IINAATRSLDAIWQAG--H 338 + + ++ G + S ++ PT + + A L + G Sbjct: 481 ----LENKRRPKVITIHHRTAGQTRSRQIPIPTGRPITDTFLFDLAKTLLAQVVNEGNIW 536 Query: 339 RYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + + F L G ++ + + + G Sbjct: 537 PCANLSLNVSGFEDGVTGNQRLDSFFLRGTGDTKVASAPSQQQQR---NSDTRQGYLPGS 593 Query: 399 QWQMKR 404 + Q +R Sbjct: 594 EPQKRR 599 Score = 77.5 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 2/69 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D++AFYA CE V +P+ V +IA N A+A + + + Sbjct: 85 IIAHIDLDAFYAQCEMVRLNTPRTQPLAV--QQWESLIAVNYAARAFNITRMLTAAEARK 142 Query: 61 LFRRCGVVC 69 + Sbjct: 143 RCPQLVTQH 151 >UniRef50_B5BUV4 DNA polymerase eta n=4 Tax=Agaricales RepID=B5BUV4_COPCI Length = 641 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 9/200 (4%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + R VL++ + G+A+ K LAKLA K + + + Sbjct: 266 AAGMVMKARKGVLEQLGYSTSAGLARNKFLAKLAASYRKPFGQN------ILRNAAIPNY 319 Query: 176 MSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPC 234 + + + +G ++ + L TV DL + ++ F LRG Sbjct: 320 LIPMAFQKIRFLGGKLGRALAQEYDAATVGDLLSISLDEMQNKFGEDSIWVYEILRGIDR 379 Query: 235 LQLEEFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIK 293 ++++ T + ++ S++ + IT I AA A +L Q + Sbjct: 380 SEVKDKGTTLTKSMLASKNLPKPITAASEGYHWIRVLAAELALRLNEARQISPNLWPK-N 438 Query: 294 TSPFALNEPYYGNSASVKLL 313 A S Sbjct: 439 IVLHARKGYESSRSKQAVFP 458 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 49/135 (36%), Gaps = 25/135 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + LCD +AFYA+CE V P+VVL +IA N A+ G+ D Sbjct: 46 VVGLCDSDAFYAACEMVRLGVDKDTPLVVLQ--WDSLIAVNYPARKYGISRMDKKKDALK 103 Query: 61 LFRRCGVVC---------------------FSSNYELYADMSNRVMSTLEELSP--RVEI 97 VV + + Y S ++ + EL P VE Sbjct: 104 RCPHLKVVHVATYKEGEKEPGYWDNVDTNTHKVSLDYYRRESMKIAALFRELLPGCEVEK 163 Query: 98 YSIDEAFCDLTGVRN 112 SIDEAF D T Sbjct: 164 ASIDEAFIDFTKPVR 178 >UniRef50_Q4PIG2 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PIG2_USTMA Length = 865 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 70/227 (30%), Gaps = 8/227 (3%) Query: 111 RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + +R VL T GI KTL+KL + K + + Sbjct: 404 VALALGAELMNRVRQNVLDELGYTTSAGIGSNKTLSKLCSSWRKPNGQ------TIMRPC 457 Query: 171 RQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFIRKHFNVVLERTVREL 229 S+LP + +G ++ + TV DL + ++ F L Sbjct: 458 SVANFFSSLPFQKIRFLGGKLGNAMGAEWNSATVSDLWGVGLDEMQAKFGEEARWVYNVL 517 Query: 230 RGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIS 289 RG ++ E Q ++ S+S IT + + A +LR + R + Sbjct: 518 RGIDYSEVRERVN-NQTMLASKSVRPAITKPEEATHWLDILSTELAIRLREAREERRNLW 576 Query: 290 TFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQA 336 + + + T + D+ + +W+ Sbjct: 577 PKTLVLRYIRAGSVPRSRQTAFPFTNPNNQDDLAKVILKKGQKLWEE 623 Score = 74.8 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 46/136 (33%), Gaps = 26/136 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGK-PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + A CDV+A YA E P+ V +IA N A+ GV + + Sbjct: 115 VVAHCDVDAAYAQFEASRLGLDATVVPIAV--QQWQGLIAVNYPARDAGVSRFESIPEAL 172 Query: 60 DLFRRCGVVC--------FSSNYEL-------------YADMSNRVMSTLEELSPR--VE 96 +V +Y Y S ++++ + P VE Sbjct: 173 KKCPDLHLVHVATYAHGSNKPDYHPDPKPETHKVSLDHYRRESTKILTIFKRTCPHGAVE 232 Query: 97 IYSIDEAFCDLTGVRN 112 SIDE++ DLT Sbjct: 233 KASIDESYFDLTIEVR 248 >UniRef50_C1E7T2 Umuc-like DNA repair protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7T2_9CHLO Length = 652 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 51/275 (18%), Positives = 84/275 (30%), Gaps = 35/275 (12%) Query: 106 DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 D R R E R V T L + GIA K LAKL + K + Sbjct: 238 DPARERRLRVGAAIAAEARDAVRSATGLRMSAGIAHNKMLAKLVSGLHKPDDQ------T 291 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LER 224 KL+S LPV + G+G + L G++T DL + + + Sbjct: 292 TLPAGVAAKLVSPLPVRALPGVGHGAERTLVHRGVRTAADLRRVTRSEVCEWLGPRVGRK 351 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSE--- 281 G ++ + T + S+ + A ++ E Sbjct: 352 VHDAAWGVDREEVAPKPAP--NFVTCEDSFRSCTTWSSVDAVLAVIAPDLLARMDEEYED 409 Query: 282 --------------HQYCRFISTFIKTS-PFALNEPYYGNSASVKLLTPTQD-------- 318 + R ++ + P + +SAS + T D Sbjct: 410 EVERTVGAGALIPAGRAARTLTVKWRDVGPGGKGTGWSRSSASTTMPTLANDRSIDAKRR 469 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQ 353 + + AATR L + G + V G+F + Sbjct: 470 ADALREAATRVLRSELTRGFDLRALNVGAGNFEPK 504 Score = 87.5 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 4/109 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A DV+AFY+ E + P L G+P+ V ++ N A++ G+K K K Sbjct: 59 IVAHFDVDAFYSQVEELRDPRLRGRPMAVTQ--KFLIVTANYAARSAGLKKLMSTTKAKA 116 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTG 109 L +V + Y + +V + LE E +DE + DLT Sbjct: 117 LCPEVALVSGE-DLTPYRACAKKVRAALERFG-TCEKLGLDECWVDLTA 163 >UniRef50_A7HCF7 Putative uncharacterized protein n=2 Tax=Anaeromyxobacter RepID=A7HCF7_ANADF Length = 555 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 60/417 (14%), Positives = 106/417 (25%), Gaps = 52/417 (12%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+ V+S DG ++ +A A A GV+ G R V + V Sbjct: 36 PLAVVS--DGKIVHCDAAAAADGVRPGATVSAALAACGRLRTVAL--DPAAERAALRAVA 91 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRD------------------------------ 115 + L+P VE + D D + Sbjct: 92 EAVLLLAPAVEPVTPDVVLLDASSAHLLAGAVQGARAEATAAGGTAPSAPVITGTMAARD 151 Query: 116 -----LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLE 170 + IA + A + Sbjct: 152 RALVAGERVLAQRAIAAAAEMGYVAQAAIATGRAAAGALARHGAFPAHDGVTARIVQVPR 211 Query: 171 RQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 ++ A + G+ ++ +L +G+ LA + F R R Sbjct: 212 QETGRALAALPLEALGLAPAVAARLRGLGVADAGALARLPAGTLAHRFGPDGVAAARLAR 271 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFIST 290 GE L +AP + + A+ A R A +L + Sbjct: 272 GEDDTPLSPYAPETLPVEA-LELDAPAESAEPLLFAVKRLADRVAARLAGRGLGATRLKI 330 Query: 291 FIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDF 350 +K P V L PT + + A + A+ G + + Sbjct: 331 VLKLDPRGEERVI------VPLAQPTAAAARWLVPAKEHVFALRLPGA-VTSVQLAAIEV 383 Query: 351 FSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 Q + L V+ L + G G L+ A ++++ + A Sbjct: 384 APLAAEQ---LAIDDRPEALAALENVLARLTGRLGDGALFAAEPV--ERYRPEAAYR 435 >UniRef50_A4BIT4 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIT4_9GAMM Length = 463 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 52/385 (13%), Positives = 106/385 (27%), Gaps = 23/385 (5%) Query: 15 ETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNY 74 E F D P ++L V+ N A+ GV+ G L C + + Sbjct: 14 EAGFLGDQRPLPQLLLQPGQHTVLQCNDYARDAGVREGMNKKTAFCLLADCALA--EYDP 71 Query: 75 ELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLT 134 ++ + ++ + + + E T LQ + T Sbjct: 72 HSEQQALQQLALQCYRHAAQISLQPPSGLLLEAGSMLGVFGGLQPYWESTRTHLQYSGFT 131 Query: 135 VGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK 194 + T +A+L + + N + + L V+ + + + I K Sbjct: 132 WSMSCGATPAMARLLA-------QAGIELCT-QNRTIMLQALDTLTVEQL-DLDKTIQTK 182 Query: 195 LDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 L AMGI+T L + + F L + L E Q E + Sbjct: 183 LMAMGIQTYPQLKALPRQELGFRFGAALVTQLDRL--EQDNQPPEQFVLPPRFQQTIHLN 240 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 + + L+S C + ++ + +V + Sbjct: 241 YEAEHARGLLFPLKRMLLTLESYLQSRQLLCEKLLIKLEHRDGRASLM------TVPSVQ 294 Query: 315 PTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLM 374 + D + L+ + + DF ++ + D R Sbjct: 295 GSDRQSDWLALLDTYLEQMTLID-PVTAVTLRAKDFRTRQHDSHDFLGD---RFPQADAN 350 Query: 375 TVMDTLNAKEGRGTLYFAGQGIQQQ 399 ++ L A+ G + + Sbjct: 351 RMLSLLLARLGEPNVRKLSVQHDPR 375 >UniRef50_A4RD58 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea RepID=A4RD58_MAGGR Length = 617 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 49/361 (13%), Positives = 101/361 (27%), Gaps = 96/361 (26%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + P L PV + + N A+ GVK + +D Sbjct: 56 IILHF--------VVENKEPSLKSLPVGI--KQKSILATCNYVARRRGVKKLMRISEARD 105 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDLTGVRNC----- 113 + +V + + D S + L + R E +DE F D++ + + Sbjct: 106 ICPDLVLVDGE-DLTPFRDTSKILYRVLRSFSWNDRAERLGLDEVFLDVSDMVSYNLDLL 164 Query: 114 ----------------------RDLTDFGRE-----------------------IRATVL 128 D T F +R +L Sbjct: 165 NPHGLANSFFCLSSTDPELGFAFDATGFAGCVVAPSWSSNSSRGVVESDEASGLLRKRLL 224 Query: 129 QRTHLTVGV-------------GIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 +HL + GI+ K LAK+ K + T + + Sbjct: 225 LASHLAYRIRLRIEQEGYTSACGISVNKLLAKMVGSRNKPRNQTT---LLALSKADTLSF 281 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKT-------VLDLA---DTDIRFIRKHFNV----- 220 + + + GIG ++ ++ T + D + K Sbjct: 282 VDQHSLRSLPGIGGSMAAVMEQHTRSTAPDKPLKAGQVRLQHDVSPHLLEKLLQPLGLEK 341 Query: 221 -VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKL 278 + ++T R L G +++ +I ++ +++ + Q + +A ++ Sbjct: 342 GIGQKTYRLLHGIDTAEVKFACDFPIQIGIEDTYANTGLSNIAQITQQLIKLSASLIRRI 401 Query: 279 R 279 R Sbjct: 402 R 402 >UniRef50_A7F1S2 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7F1S2_SCLS1 Length = 465 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 55/301 (18%), Positives = 89/301 (29%), Gaps = 94/301 (31%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D +AFYA CE V +P+ V +IA N A+ G G + + Sbjct: 37 VIALVDYDAFYAQCEMVRLKLDASQPLAV--QQWNAIIALNYAARGFGFSRGASVEEVRR 94 Query: 61 LFRRCGVVC-------------------------FSSNYELYADMSNRVMSTLEELSP-- 93 L + + + Y S + ++ + + P Sbjct: 95 LCPNIIMQHVATWREGETSWAYRSDAADPAMMKKDKAALDPYRIESRKSINIITKHLPPA 154 Query: 94 ---RVEIYSIDEAFCDL------------------------------------------- 107 R+E S+DE F DL Sbjct: 155 PLQRIEKASVDEVFIDLSAHVHSVLVSRYPQLAVDDNVHGSLPLPPRDIVLHWETDNLVD 214 Query: 108 ----TGVRNCRDLTDFG--------REIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKK 155 T + D + R +R + + H T GIAQ K LAKL K Sbjct: 215 LPTSTDDTHRIDWDEIALNIGAQIVRNLRKEIFESLHYTCSAGIAQNKALAKLGAGFKKP 274 Query: 156 WQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKTVLDLADTDIRFI 214 Q+ + +S + + G+ + K +A G ++ DL + I Sbjct: 275 DQQ------TVIRARAVPFFLSTCKMTSIRGLAGVLGVKAKEAFGSNSIPDLLAIPQKEI 328 Query: 215 R 215 Sbjct: 329 V 329 >UniRef50_C4QYV7 Putative uncharacterized protein n=1 Tax=Pichia pastoris GS115 RepID=C4QYV7_PICPG Length = 614 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 68/481 (14%), Positives = 140/481 (29%), Gaps = 109/481 (22%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKP---------VVVLSNNDGCVIAR-----NAEAKA 46 + A DVNAF+A E + P + V + I R +A +K Sbjct: 32 VVAHIDVNAFFAQVEQLRLGLSKEDPLVCVQWSSIIAVSYSARKYGINRMDTLESALSKC 91 Query: 47 LGVKMGDP--WFKQKDLFRRCGVVCFSSNYEL----YADMSNRVM--------------- 85 G+K+G + K + + + ++++ Y S ++M Sbjct: 92 EGLKVGHTAVFKKGQSDWSYIDYLPSPKDHKVSLDPYRRESRKIMRIFKLRCSKVEKASV 151 Query: 86 ------------STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDF-------------- 119 L EL P V S+D++F D Sbjct: 152 DESFLDLGNVVFQKLLELFP-VLKNSLDKSFDDYLPEIPEELPEGLDFKGEVIRCPETDD 210 Query: 120 --------------------GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 +IR + + T GI + KT+AKLA+ K + Sbjct: 211 QDGLVLQDWDDIVMLLASMEAHDIRKQIEKALDYTTSCGIGRVKTIAKLASGLHKPDNQ- 269 Query: 160 TGGVVDLSNLERQRKLMS-ALPVDDVWGIGRRIS----KKL---DAMGIKTVLDLADTDI 211 + ++ D WGIG + S ++L + I + + + Sbjct: 270 -----TIIRNCAIDNFLNTHFKFTDFWGIGPKTSGIIKQRLLVPEEDSIGYIKENFTQEE 324 Query: 212 RFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF-GERITDYPSMRQAICSY 270 ++ + R + +RG + + + +++F G+ + + + + Sbjct: 325 LELKLKDPQLATRLYQLVRGLYQEAINTRIDI-KSMGSNKNFRGKSVNSVKDLIDWLPVF 383 Query: 271 AARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS---RDIINAAT 327 ++L + KT L S + I + A Sbjct: 384 VGDLIQRLTELDEEQPNCIRRPKTVAVHLWSWNGAYSKQCTVPKFMDLFKLKEVISHEAE 443 Query: 328 RSLDAIW-------QAGHRYQKAGVMLGDFFS-QGVAQLNLFDDNAPRPGSEQLMTVMDT 379 + + + + L F ++ F ++ R E + ++ + Sbjct: 444 HLIKTFASTFDNSPVSLFPLRSFSLNLTSFEVISSKESIDKFVSSSKRNREEHIDSLFKS 503 Query: 380 L 380 L Sbjct: 504 L 504 >UniRef50_Q015X2 DNA polymerase iota/DNA damage inducible protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q015X2_OSTTA Length = 492 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 68/437 (15%), Positives = 120/437 (27%), Gaps = 93/437 (21%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AF+A E + L G P+ V G ++ A+ALG K D + L Sbjct: 23 VLHVDADAFFAQVEALRDERLRGIPIAV--RQHGDIVCVCHRARALGAKKHDDVDACRTL 80 Query: 62 FRRCGVVCFSSN--------YELYADMSNRVMSTLEELSPRV----------EIYSIDEA 103 G N YE Y MS + + L R+ E SIDEA Sbjct: 81 LENNGGKVIHVNTTAEHLVSYEPYTRMSYELHAKLHAACERLRLDGKGIVIYEKASIDEA 140 Query: 104 FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGV 163 + + +C+ QR V VG+A+ K LA+ H Sbjct: 141 YVQIEHGSSCQSAARRSPSRFDGRFQRVRTRVSVGVARNKLLARSLPHCK---------- 190 Query: 164 VDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN---V 220 G + KL G+ T ++ + + + Sbjct: 191 ------------------------GELVRPKLTKHGLHTAWNVRSMNAKRLESLIGLAPK 226 Query: 221 VLERTVRELRGEPCLQLEEFAPTKQEIICSRS------------------------FGER 256 + G ++ + K + + Sbjct: 227 PALELCKAAHGVDDAEVIQRVNEKSSLSTQMTLTIKPRPMPRNVGGEVGVTGGPAGMFNP 286 Query: 257 ITDYPSMRQAI--CSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLT 314 +T R A+ + EK++ Y + + ++ + S Sbjct: 287 LTCGEHDRIALTMTALTRELCEKIKVHELYTKRWPITMG-VKIKIHGTSVQYNRSAAFPV 345 Query: 315 PTQDSRD------IINAATRS--LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 ++ + + AT L + Q V +F S + D+ Sbjct: 346 KFDNAMEENVPITMAKKATELAVLAVGQRKTEIIQHITVSASNFKSSTGEKEKTRDEIIS 405 Query: 367 RPGSEQLMTVMDTLNAK 383 + L + +N K Sbjct: 406 AET-DPLKKAISRMNEK 421 >UniRef50_Q21LY8 Putative uncharacterized protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21LY8_SACD2 Length = 541 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 51/417 (12%), Positives = 107/417 (25%), Gaps = 40/417 (9%) Query: 14 CETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSN 73 C +P ++ V A LG+ P + L + S Sbjct: 31 CRQNEQPIHSHCNQAIVVVEKFRVTHLTQGAAKLGITTNMPIATAQAL---GNITQLEST 87 Query: 74 YELYADMSNRVMSTLEELSPRVE---IYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQR 130 + N + +P +E +++ D D L R Sbjct: 88 PQKQQQAINILQDICYRFTPYIETQHSNGHTGLLLEISRCLLLFDGVDSLYNQLTQALNR 147 Query: 131 THLTVGVGIAQTKTLAK--------LANHAAKK----WQRQTGGVVDLSNLERQRKL--- 175 T + TK A A+++ K ++ ER R Sbjct: 148 TPFEYKLAFGHTKHAAWLQTFAQSQQADYSQKILDTLNTLYNSKHSTVNTAERCRAFFIE 207 Query: 176 -MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADT----DIRFIRKHFNVVLERTVRELR 230 ++ + + + + LD G +T+ D+ + + + K + EL Sbjct: 208 QLNRNAIHLLHD-HPKAIESLDKTGFQTLKDIYNHIETNGLASLSKRLGTDFTEYLAELY 266 Query: 231 GEPC--------LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH 282 ++ F I + +RQ + + + + LR+ Sbjct: 267 DIDQGTKQTSLFKPPARTYQPQEIFCQHIQFDYPIANSEQLRQPMQTLLQQLDDFLRNRQ 326 Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 Q + + + + + L + ++ + L+ A Sbjct: 327 QQIQRLYWHLFDIYQNKDTLVVNGNG---LSGQHHTWQQLLELSIIQLENKSLA-FEVDI 382 Query: 343 AGVMLGDFFSQGVAQLNL-FDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + L FD GS + L ++ G +Y Sbjct: 383 LELECQHLQQAQHTSQALAFDGKHNNQGSNAFELTLARLQSRLGEHAIYKVSAHDSH 439 >UniRef50_B4VGM9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B4VGM9_9ACTO Length = 380 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 70/198 (35%), Gaps = 9/198 (4%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGI 139 V+ L E SP V+ A + G + D IR + R V +G+ Sbjct: 20 RAVLELLREFSPLVQALPPRAALVQVRGAQRYFGVDPERIAEVIRLRAVARLGTDVRIGV 79 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A T +A +A+ G V ER + + LPV++++G+G R ++ L G Sbjct: 80 AGTWAVAAMASAR-----IPGPGGVLAVPGERVAEFLGPLPVEELYGLGSRQAEALRGYG 134 Query: 200 IKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 + TV L + + + V RG + + SR E + Sbjct: 135 LHTVGALTEVPPGVVERILGRRAGRVVVERARGIDPRPVTPRDLPSSAAVRSRFAREEL- 193 Query: 259 DYPSMRQAICSYAARAAE 276 D P R + R Sbjct: 194 DGPHARAELLGLVVRLGA 211 >UniRef50_B1XYC2 Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XYC2_LEPCP Length = 547 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 62/400 (15%), Positives = 116/400 (29%), Gaps = 36/400 (9%) Query: 30 LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLE 89 V+ NA A+ALGV+ G + L + V + + A + R+ L Sbjct: 37 AGGRTRTVLIANAAAQALGVQAGQRLGSAQALAPQALV--LARDPAREAALLERLALGLG 94 Query: 90 ELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLA 149 LSP+ I D D+ +++ + +A T A+L Sbjct: 95 SLSPQRVIEPPD-LLLDIHASLRLFGGLRPLLRRADRLVRAQAVQPRWSLASTPLAARLL 153 Query: 150 NHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR-------------------- 189 H A QRQ V S R L AL G Sbjct: 154 AH-APPAQRQRRCVQLRSTRRRVLALPLALLGAWGLPCGATDTERRAADGPADAAGVAAR 212 Query: 190 -------RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP 242 + L A+G + + DL +R+ + G+ P Sbjct: 213 RVAAAHIATLEMLHALGARCLADLQRLPRAGLRRRGAQDWVDALDRALGDQPDPRRCHEP 272 Query: 243 TKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 + + R P++ A L + + +S ++ ++ Sbjct: 273 PE-AFALALELPWRADAVPAIEAAAAPLVQALCGWLALRWRAAQGLSLILRH-DYSSRRS 330 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFD 362 + L TP++++R + L + A + L + L+ Sbjct: 331 LPDQVLRLDLATPSREARHLQTLLREHLQHLVLA-APVDAITLQLDTSLPEAGRPTTLWP 389 Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQM 402 D ++ ++D L A+ G + + + Sbjct: 390 DA--HQQAQAHTNLVDRLQARLGAAQVRRLLPQADARPEK 427 >UniRef50_C4ZK47 Putative uncharacterized protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZK47_THASP Length = 505 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 95/348 (27%), Gaps = 18/348 (5%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+ +LS G V+A +A A A G++ G L + A+ + Sbjct: 25 PLAILS-PRGRVLAASAAASAAGIEPGQRAASALALLPELRLQ--PHEPAREAEALAEIA 81 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 + SPR+ + + D +++ T L T + A T Sbjct: 82 TWAGRFSPRISLSAADAVLLEISSCLRLFGGTAQIESALREGLAELGFTALLACAPTPLA 141 Query: 146 AKLANHAAKKWQRQTGGVVDLSNLE----RQRKLMSALPVDDVWG---IGRRISKKLDAM 198 A+ AA + R + LP++ + + L + Sbjct: 142 ARWLARAAAPSALSCPPTDAALPTDAAGQDWRAALDPLPLELLSEEDACDAATLELLAGL 201 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERIT 258 G++T+ +L + + R + RGE F + + Sbjct: 202 GLRTLGELRRLPPAGLARRGAQAAARALARARGELADPRPWFEAPLR-FHHGIALPAPEL 260 Query: 259 DYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQD 318 ++ A A A L + H + L P++D Sbjct: 261 HAEALLFAARRLFASLAAWLDARHAAVDRFRLRF------GHGSRPPTELEFALGRPSRD 314 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP 366 L + + + + +LF D A Sbjct: 315 EGHFALIVRERLAMLELS-AEVDSITLCAESPVAADPRARDLFGDPAQ 361 >UniRef50_C9Y7V7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y7V7_9BURK Length = 488 Score = 99.4 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 44/370 (11%), Positives = 93/370 (25%), Gaps = 26/370 (7%) Query: 46 ALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFC 105 LG+ L + L D S + +P V D Sbjct: 2 RLGLWKRRRAMHWIALRPSPDAAAAPTEPAL-VDASTALAWWALRFTPLVARVG-DALVL 59 Query: 106 DLTGVRNCRDL-TDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVV 164 +++ T +++ + Q HL T +A A Q V Sbjct: 60 EVSASERLFGGRTALLQQLLESNRQLAHLEY--AQGATSLIALAALQVHACRVGQAAPVR 117 Query: 165 DLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER 224 + ALPV + + L +G++T L + + F + Sbjct: 118 AVLP--------DALPVHTLAAAQPHL-PTLARLGMRTWGQLRALPRGGVVRRFGAEVVD 168 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQY 284 + G+ ++ + + P++ A+ LR+ Sbjct: 169 ALDRAYGQRP-EVYPWLTLPDVFDAPLELAASVDSAPALLFGARRLLAQLLVWLRARQSG 227 Query: 285 CRFISTFIKTSPFALNEPYYGNSAS--------VKLLTPTQDSRDIINAATRSLDAIWQA 336 + + N + ++ TQD + L + Sbjct: 228 VLALELLWELDARRANTRHVDAHHQGGQQGRLELRTAEATQDMSHLKRILGEQLARVTLP 287 Query: 337 GHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI 396 + G +L + L ++ L A+ G ++ A Sbjct: 288 -APVLYLRLRSLQTQPLGGESHSLL--PEDVRKGDSLHQTLERLAARLGAHSVQCATPQA 344 Query: 397 QQQWQMKRAM 406 + + + Sbjct: 345 DHRPERMQRW 354 >UniRef50_Q08N74 Nucleotidyltransferase/DNA polymerase involved in DNA repair, putative n=2 Tax=Cystobacterineae RepID=Q08N74_STIAU Length = 503 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 52/404 (12%), Positives = 119/404 (29%), Gaps = 28/404 (6%) Query: 10 FYASCETVFRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQKDLFRRCGV 67 F A + + P L GKP ++ G V + A G + G L + Sbjct: 11 FPAQRKVIESPGLAGKPFALVEEVRGQRRVAFASTSALKAGARAGMTLTAANALEP--AL 68 Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATV 127 F+ E A + + L ++P ++ + D + D + + + V Sbjct: 69 QHFAYRAEEEARALSSLGEALLCVAPAFQLAAPDGLWFDASA-AHLFGGEEGLCLRALEV 127 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI 187 +A ++ V + + +++ + + Sbjct: 128 CSGHGYRGRAVVASELFTSQALAR-------HGTRPVQVVAPQESAPALAS---LPLLAL 177 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 A+G T+ ++A + R +G + + Sbjct: 178 AEASRAPFTALGFSTLGEVAALPAGAVTARGGAEGLRAHMLCQGRDDTPFVAAVLEEV-L 236 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 + + ++ A+ + R +L + +S ++ P Sbjct: 237 EERMTLEWPAESFEPLQFALKTVLDRICARLAGRRRAAVQLSFVLRLD------PKGQVE 290 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 + L PT S+ +++ A L + + + + QL L D Sbjct: 291 LPLTLARPTARSKLLLDLARHRLSDLKLEN-PVAALSIRVEEHSEDRGQQLALGDAPEGD 349 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 L V+ L G G+L+ A + + ++A ++ + Sbjct: 350 ---AALEVVLSRLATTLGEGSLFCAAL--EAVHRPEQAYVARAF 388 >UniRef50_A1WXU5 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WXU5_HALHL Length = 432 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 43/327 (13%), Positives = 90/327 (27%), Gaps = 22/327 (6%) Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLT-VGVGI 139 ++ EL+ + + D F ++ G + ++ L+ + Sbjct: 31 LEQIALWGLELTHQASLEPPDTVFLEVGGSQRLFGGRAAIQQRAQEGLRELGQPRAALAA 90 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A T A+L A + L++ + R+ + LP + L +G Sbjct: 91 APTPQGARLLARA--------SPGIWLTDRQSLRRALMPLP-CHLLDPTPAQQSALSTLG 141 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 + + D +R+ RT+ + GE P Q Sbjct: 142 LTRLGDCLRMPRSGLRRRIGDPPIRTLEQALGERPEP-RRCIPPPQRYRGRLELPAPTAA 200 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 + A+ LR + + ++ G PT+D Sbjct: 201 TQATGFALQRLLRALVGMLRGLDAGIQQAAVALEHPDGPDTRLTLGFLR------PTRDL 254 Query: 320 RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDT 379 + + A L+ + +LF+ E + T+ + Sbjct: 255 EHMAHIARHRLERQALPDVA-TAVRLEADQLLPYQGTSGDLFERTGA--DGEAVRTLSER 311 Query: 380 LNAKEGRGTLYFAGQGIQQQWQMKRAM 406 L A+ G + + +RA Sbjct: 312 LIARLGADCVQRLATYPDPR--PERAW 336 >UniRef50_C6NX90 Putative uncharacterized protein n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX90_9GAMM Length = 471 Score = 98.3 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 50/408 (12%), Positives = 109/408 (26%), Gaps = 31/408 (7%) Query: 7 VNAFYASC------ETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + ++Y + ++ D G VVL++ + R A G+ G K + Sbjct: 3 MASYYVAVYFPELDAGLWEQDEQGMAPVVLADGRHRLQQRGPMAIHCGLAPGMSLAKARA 62 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT-GVRNCRDLTDF 119 L + + + L P+V I + G Sbjct: 63 LCPALRL--RPERPQRRLEFLRDWAHWLYGWGPQVAILEPWSTALGVEVGSNPRWRAGRQ 120 Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 G A T T A L A G + ++ ++ L Sbjct: 121 AFLEALRARAEGGPRWRWGAAPTATGAVLLALGAA------DGAGWTVSRQQWAQVWPRL 174 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 P+ + R+ + ++G+ T+ DLA D + F ++ + G Sbjct: 175 PLSALP-AETRVQELWYSLGLGTLGDLAALDDAARAQRFGPYWGEFLQIVAGLRPDPRPY 233 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 FA + + D+P++R + + L R ++ Sbjct: 234 FAFPEV-PRRELELVQPAGDWPALRFPLARLFRELQKMLTRAGLGARRWQLRLQGREGRF 292 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + R++ + + + D Q + Sbjct: 293 EDCLESRE--------ILSDRELFLELWQGRLQRRPWTFAAETIVLEALDTCPWQGQQRD 344 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 + ++ +++ A+ G +Y + + A Sbjct: 345 FWREDLAERQE----RLLEQWQARLGPEAVYILSPWPDHR--PEHAYR 386 >UniRef50_A1S6R3 Putative uncharacterized protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6R3_SHEAM Length = 763 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 82/304 (26%), Gaps = 38/304 (12%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P+++ V+ +A + GV G L V F + L+ S+ + Sbjct: 27 PLILYDVAKARVLKACPQAASAGVMAGQSMGSAAQLCPE--VQPFPFDLSLHRQGSDWLC 84 Query: 86 STLEELSPRVEIYSI---------DEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVG 136 S R+ D + + + A L+ + + Sbjct: 85 RHGYSFSARLVPPPEPDTLFARCHDVLLLETGSMAKLFGGEAALAKALAAALEGLNCSFA 144 Query: 137 VGIAQTKTLAKLANHA-----AKKWQRQTGGVVDLSNL--------------------ER 171 + A T A + A +K Q L + E Sbjct: 145 MAFAATPLAAGVLAKAQPCLVSKTLQPMFAKAATLQSALKVSASKSASKAIAEPKSAAED 204 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 + +SALP+ + + + +L+ MG++ + L + F + L G Sbjct: 205 LSRQLSALPISTLP-VPEALLSRLEGMGLEHIGALQALPAAELGIRFGPEFVLLLARLNG 263 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + P + E ++ + A A LR + Sbjct: 264 NQPHPQSFYCPQE-EYCQRIELMYEAESLNALVFVLGRMFAELALFLRQRQLAVSMLELV 322 Query: 292 IKTS 295 + Sbjct: 323 LHYR 326 >UniRef50_Q6BM10 DEHA2F09196p n=2 Tax=Debaryomyces hansenii RepID=Q6BM10_DEBHA Length = 770 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 43/135 (31%), Gaps = 24/135 (17%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + A D+NAF+A E V PVV +IA + A+ G+ D + Sbjct: 44 VVAHVDLNAFFAQVEQVRLNLTADDPVVCAQ--WQSLIAVSYAARKFGIGRMDTIQSARQ 101 Query: 61 LFRRCGVV----------------------CFSSNYELYADMSNRVMSTLEELSPRVEIY 98 + + + Y S ++M+ E VE Sbjct: 102 KCPNIIIAHAAVFKKGDSYWSYIRGLPDRSVHKVSLDPYRRESRKIMNIFREYCDLVEKA 161 Query: 99 SIDEAFCDLTGVRNC 113 S+DE F D + Sbjct: 162 SVDECFLDFGRMIYY 176 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 34/288 (11%), Positives = 93/288 (32%), Gaps = 22/288 (7%) Query: 106 DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 D V + E+R V + T G+ + K +AK+A K + Sbjct: 239 DWDDVCMLIG-SQLLYEVRQQVFEELGYTTSGGLGKNKIIAKIAGGFLKPDNQ------T 291 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISK-KLDAM----GIKTVLDLA-DTDIRFIRKHF- 218 + + + D G+G + + + + ++ + + + I+K F Sbjct: 292 IIRTCSMNNFLKNFQLIDFNGMGGKTGDVIMQRLEVPPDVNSISFIRNNFSLEDIQKEFA 351 Query: 219 --NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF--GERITDYPSMRQAICSYAARA 274 + ++T + +RG +L + ++ ++F + + I +A Sbjct: 352 NDPPLAQKTYQMVRGNYRQELS-LRTEIKSMMSRKNFLSKNPVNNIHDAYDWIKVFAGDL 410 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALN-EPYYGNSASVKLLTPTQDSRDIINAATRSLDAI 333 +L +S ++ S + + + S+ + RSL+ + Sbjct: 411 YGRLIELDDESLNLSMSQESRRGKGYIRRPKTISIQISSTSYVKHSKQMQLTIVRSLEKL 470 Query: 334 WQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 + +++ + L + + + +++ +N Sbjct: 471 -KENMEVTGLRLLMDILDNSTNVHK-LNNGISLKELDKKIDKDYSKIN 516 >UniRef50_B9ZJT1 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZJT1_9GAMM Length = 478 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 54/373 (14%), Positives = 114/373 (30%), Gaps = 23/373 (6%) Query: 22 LWGKPV-VVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADM 80 L +P+ V+ CV A N A+ G + G + +V + + Sbjct: 23 LTERPLLVIEDGTAPCVHAANRAARRAGARPGMALADALAILDTPELV--EHDPQAQTAQ 80 Query: 81 SNRVMSTLEELSPRVEIYSI-DEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGI 139 + L + S V ++ R RE L+ +G+ Sbjct: 81 IAMLAGVLLQFSDHVHPEPDARRILLEVGRSRRLFGGLAVLREQARETLEGLGFHPRIGV 140 Query: 140 AQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMG 199 A++ A+L + + E R+ +S +P++ + + + L A G Sbjct: 141 ARSPAAARLLATLRNPAIPE--------DAEALRRTLSPVPLEALP-LPAATREGLRATG 191 Query: 200 IKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITD 259 ++ + DL + + L + L G L F P E+ I Sbjct: 192 LRQLGDLLRLSRPELARRHGPELLALLDRLLGRRTETLPRFNPPP-ELDLPLRLEHEIHT 250 Query: 260 YPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDS 319 ++ + +A +LR ++ + ++ +K +++ P + Sbjct: 251 TGALAFPLKRLLRQAEAQLRGLNRSLQGMTLELKH-------REVHTRITLERGHPGIRA 303 Query: 320 RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR-PGSEQLMTVMD 378 D + L+ + +L + P QL V+ Sbjct: 304 EDWLPLWQTRLEREALP-APVIGLRLRATQLLDPPAEGASLLAEAPGHPPPESQLPAVLA 362 Query: 379 TLNAKEGRGTLYF 391 L+A+ G + Sbjct: 363 RLSARLGEQAIVR 375 >UniRef50_A1KCL6 Putative uncharacterized protein n=1 Tax=Azoarcus sp. BH72 RepID=A1KCL6_AZOSB Length = 473 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 50/394 (12%), Positives = 111/394 (28%), Gaps = 27/394 (6%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P +++ V + A+A G++ G L + + A + Sbjct: 7 PAAAVAHQRIVVG--DGAAEAAGIQPGMRVSSALGLAPGLTLHA--RDPAREAAALEALA 62 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTL 145 SP++ + DE ++ G + T+ G+A + Sbjct: 63 CWAGRFSPQLSVAGEDELVLEIQGCLRLFGGLAALLGQVREEGEAQGFTLQCGLAPSVLG 122 Query: 146 AKLANHAAKKWQRQTGGVVDLSNL--------ERQRKLMSALPVDDVWGIGRRISKKLDA 197 A+ A + + L++ LPV+ + + ++LD Sbjct: 123 AQWLARAGIAPAAAMPHAGPPAAADAAQAATVDGLHALLAPLPVEVLR-LPPADQRRLDT 181 Query: 198 MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 +G++ + L + + F L + G FA ++ R+ Sbjct: 182 LGLRHLGHLLALPPATLARRFGPQLTLQLERALGTVPDPRPPFAFPQR-FATRLELPARV 240 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + A A A L + + + G T T+ Sbjct: 241 DHAAMLLFAARRLAMALAGWLAARAAGVQEYLLVLIHEDAPPTRLVLG------FATATR 294 Query: 318 DSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVM 377 D+ + R + ++ LF + + V+ Sbjct: 295 DAGR-LLRVLRERLDRTTLAAPVVELQLLAETPLPLPGHSAGLFGEAGG----AAIAPVV 349 Query: 378 DTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRY 411 + L A+ G+ ++ + + + A SP + Sbjct: 350 ERLRARLGQTAVHALAVVGEHR--PECATRSPDW 381 >UniRef50_Q14N03 Putative dna polymerase iv c-terminal truncated protein n=1 Tax=Spiroplasma citri RepID=Q14N03_SPICI Length = 90 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 3/88 (3%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDG-CVIARNAEAKALGVKMGDPWFKQK 59 + D+N+F+ASC V P L GKP+VV +++ V N EA+ LG+ P +K K Sbjct: 3 VIFHIDMNSFFASCHQVANPHLQGKPLVVANSSRQAVVTTANYEARQLGINSPMPLYKAK 62 Query: 60 DLFRRCGVVCFSSNYELYADMSNRVMST 87 ++ + ++ LY D + ++ + Sbjct: 63 EIC--HHLEIVKQDFGLYVDFAQKLFNF 88 >UniRef50_B5JLQ0 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLQ0_9BACT Length = 523 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 62/384 (16%), Positives = 117/384 (30%), Gaps = 26/384 (6%) Query: 26 PVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNR 83 VVV+ V+ A GV +G + G+V + + + Sbjct: 47 AVVVVDAEAKKPVVLEMTEMAAKEGVVVGLSIPQALARCE--GLVVKHRSDQAERMVEEL 104 Query: 84 VMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTK 143 + + LSPRVE+ DL G + EI L LTVG+G+A++ Sbjct: 105 LFAMAYSLSPRVEMDGAGRVLVDLRG-AKIEEAIARCGEIVGE-LAAMGLTVGIGVAESW 162 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLE--------RQRKLMSALPVDDVWGIGRRISKKL 195 +A LA A + G L + ++ L + V G + L Sbjct: 163 VVAGLAARAVEGRVLCVGPCFALRASQGSRGARSVEVGAFLAGLALGAVEMSG-ALRDVL 221 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE 255 + GI+++ A + V + G + E + S F Sbjct: 222 EKWGIRSLAVFAGLKRSAVGARLGVEGLALWDRVTGREERVVAVAELPA-EFVESWDFEY 280 Query: 256 RITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTP 315 + + + + ++R+ H+ F ++ + KL P Sbjct: 281 DVDSVEPLLFLLRRFLDTLGARMRAGHKVAAFARVELRLAYGEP------VVVEQKLPEP 334 Query: 316 TQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMT 375 T D+ + L+ + + L QL LF+ + P + Sbjct: 335 TSDAGALFGLLAARLEEVEAES-PVAAMELRLE-VADFRERQLGLFESSLKNP--YRFTQ 390 Query: 376 VMDTLNAKEGRGTLYFAGQGIQQQ 399 + + G + ++ Sbjct: 391 TLSRVAGIVGEDRVGRPVVIEDER 414 >UniRef50_A6GCV2 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GCV2_9DELT Length = 537 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 51/391 (13%), Positives = 111/391 (28%), Gaps = 23/391 (5%) Query: 18 FRPDLWGKPVVVLSNNDGC--VIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYE 75 P PV ++ ++ ++ N A+A V G + + L R F++ E Sbjct: 47 EHPAWRELPVAIVESDRPQAKLLWVNEHARARRVLPGMRYAAARSLARDLRATVFTA--E 104 Query: 76 LYADMSNRVMSTLEELSPRVEI--YSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHL 133 + + + L + SPR+E + + D G+ + L + L Sbjct: 105 RMEAAVDALFAILFDFSPRIEPEADAPGTVWIDPAGMTLLWGELESWALAVEEALAQRGL 164 Query: 134 TVGVGIAQTKTLAKLANHAAK----KWQRQTGGVVDLS--NLERQRKLMSALPVDDVWGI 187 V + + A A R G + + ++ +++P+D + GI Sbjct: 165 GAVVVVGFHRFRALAIARAHAHRANPDTRDREGPQAWVLRDRRAEARMAASVPLDRL-GI 223 Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 R+ +L ++G++++ + +R V E LE + Sbjct: 224 SPRLRDELASLGVRSLGEFMALPAVELRGRLGVEAEALQARASEGAWAPLEPRRLIDP-L 282 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 + D + I + +L + + + Sbjct: 283 VQRTELDPPEGDVTRLLFRIEPALSELLSRLADRGAALSALQLRFELDHDEPLALRLEPA 342 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 A + + A + + L Q+ LF R Sbjct: 343 APTLDARLLLELVRLRLDALDL-------PAPVELFVLELEG-QRADPRQIALF-RAQTR 393 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 + + + A G ++ A Sbjct: 394 RDLDAANRALARIRAALGPESVTRAALLPAH 424 >UniRef50_D1R480 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R480_9CHLA Length = 104 Score = 96.7 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN--DGCVIARNAEAKALGVKMGDPWFKQ 58 + D++AF+AS E + P L GKPV+V + G V + EA+A GV F+ Sbjct: 5 IIFHIDMDAFFASIEILRNPSLKGKPVIVGGSPDKRGVVSTCSYEARAYGVHSAMSLFEA 64 Query: 59 KDLFRRCG 66 K Sbjct: 65 KKKMPPRH 72 >UniRef50_Q0A9P1 Putative uncharacterized protein n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A9P1_ALHEH Length = 437 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 45/327 (13%), Positives = 92/327 (28%), Gaps = 20/327 (6%) Query: 81 SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 + + + S RV + ++ N T L+R T +A Sbjct: 38 LENLAAWAYQYSSRVCPWPPATLVLEIGASLNLFGGLQALLSRIDTGLRRLDRTARRAVA 97 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 T A G L + E R+ + LP+ + + R + L +G+ Sbjct: 98 PTPRGACWLARC--------GQQRILQSPEALRQALDPLPLAVL-DLEPRQHQALHGLGL 148 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 + + D R + + L + + + G L E+ P + R + Sbjct: 149 RRLGDCLALPRRELARRLGPALHQQLDQALGHRPEPLPEWRPPAR-YRGRRELVRETDNL 207 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSR 320 + + LR + + + +V L P +D Sbjct: 208 TPLLPLLERLLHELQGLLRGLDAGVPRFELVL------EHLHRPASRLTVGLTEPDRDPE 261 Query: 321 DIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 ++ A L Q ++ D L A + +++ L Sbjct: 262 RLLRVAGERLARE-PLAAPVQAITLLAEDIQPLRPEPEALPGTRAAH-DHHPMRVLLERL 319 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAML 407 A+ G + + + +RA Sbjct: 320 TARLGETRAHGLAVHPEHR--PERAWR 344 >UniRef50_C8Q3E7 Damage inducible protein P (DNA polymerase IV) (Fragment) n=4 Tax=Enterobacteriaceae RepID=C8Q3E7_9ENTR Length = 167 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 12/175 (6%) Query: 188 GRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 G+ +KKL+ MG+ T D+ TD+ + K F G + ++ + Sbjct: 1 GKVSAKKLEEMGLLTCGDVQQTDLARLLKRFGKFGRVLWERSHGVDERGVV-VERERKSL 59 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH--QYCRFISTFIKTSPFALNEPYYG 305 R+ E I + + I +L + +K + F L + Sbjct: 60 GVERTLMEDIHSWEQCLEIIDYLYEELERRLTRIRPDKLIARQGVKLKFNDFQLTTQEHI 119 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNL 360 P + D+I A ++ D +AG + G+ + Q QL L Sbjct: 120 W--------PVLNKEDMIAVARKTWDE-RRAGRGVRLVGLHVTLVNPQLERQLLL 165 >UniRef50_C7X3F8 UvrA n=3 Tax=Enterococcus faecalis RepID=C7X3F8_ENTFA Length = 158 Score = 95.2 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 50/143 (34%) Query: 266 AICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 + + + A +LR +S F+ S ++ + P+ +++ + Sbjct: 2 VLKELSDQVASRLRMASCQTTCVSLFVGYSKGQTDKYGQTGWRRQMKVEPSNNTKVLTEH 61 Query: 326 ATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEG 385 R + + G + GV G QL+LF + + ++D + K G Sbjct: 62 VLRLFEENYAPGVDVRNLGVSYGRLVWNKNLQLDLFSVPEEQIHETDMYFLIDKIRQKFG 121 Query: 386 RGTLYFAGQGIQQQWQMKRAMLS 408 L A ++ + RA L Sbjct: 122 FKALIHASSLMEGATAISRASLV 144 >UniRef50_C1G404 Putative uncharacterized protein n=3 Tax=Paracoccidioides brasiliensis RepID=C1G404_PARBD Length = 803 Score = 94.4 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 10/120 (8%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D + FYAS P L P+ V V+ N EA+ G++ + K Sbjct: 21 VILHFDYDCFYASVFEAENPALKSLPLAV--QQKQIVVTCNYEARRRGLRKLQLIKEAKR 78 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTL-------EELSPRVEIYSIDEAFCDLTGVRNC 113 + +V + + D S + L RVE DE F D+T + + Sbjct: 79 VCPDVVIVPGE-DLTKFRDASKEIYLFLKGFVGVERGWGGRVERLGFDEVFLDVTSLVDY 137 Score = 64.8 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 64/238 (26%), Gaps = 74/238 (31%) Query: 110 VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL 169 + + IR + Q T VGI+ +K LAKLA + K + L Sbjct: 233 YQRLILGSHLASYIRHKLEQHKSYTATVGISTSKLLAKLAGNFHKPQNQT-----TLLPP 287 Query: 170 ------------------------------ERQRKLMSALPVDDVWGIGRRISKKLDAM- 198 + + + V GIG +I++KL A Sbjct: 288 YSVANNDSNNSKPNTAATDDASEPGQEAQGSNITRFLDDHDISAVPGIGFKIAEKLRAHV 347 Query: 199 --------GIK---------TVLDLADTDIR---FIRKHF-----------------NVV 221 GI TV D+ + + + Sbjct: 348 LGRKPLGSGIYDQLPSEDRVTVRDVRLYPNMGPPLLDEILLSSNSSSSGGGGGSSLPRDI 407 Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER-ITDYPSMRQAICSYAARAAEKL 278 + + G + E +I S+G + +R+ + + A ++ Sbjct: 408 GPKIWGLINGVDPSPVAEARDVPTQISIEDSYGHGQLAGLDVVRKELLALARSLVRRM 465 >UniRef50_Q56YN7 Putative uncharacterized protein At1g49980 n=1 Tax=Arabidopsis thaliana RepID=Q56YN7_ARATH Length = 402 Score = 94.4 bits (233), Expect = 8e-18, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 67/201 (33%), Gaps = 11/201 (5%) Query: 173 RKLMSALPVDDVWGIGRRISKKLD-AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 +S LPV + GIG+ L A+GIKT ++ + + G Sbjct: 1 MTFVSFLPVRKIGGIGKVTEHILKDALGIKTCEEMVQKGSLLYALFSQSSADFFLSVGLG 60 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 +++ I R+F D + + A + ++ E R ++ Sbjct: 61 LGGTN-TPQVRSRKSISSERTFA-ATGDERLLYSKLDELAEMLSHDMKKEGLTARTLTLK 118 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFF 351 +KT+ F + S +V L T S DI+ AT+ L A + G+ + F Sbjct: 119 LKTASFEIR------SRAVSLQRYTCSSDDILKHATKLLKAE--LPVSVRLIGLRMSQFV 170 Query: 352 SQGVAQLNLFDDNAPRPGSEQ 372 + + Sbjct: 171 EEIRNSDPSQGTITKFIVQKD 191 >UniRef50_B5I0P9 Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I0P9_9ACTO Length = 291 Score = 94.0 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 68/214 (31%), Gaps = 9/214 (4%) Query: 30 LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLE 89 + R+A + G+ + + + ++ LE Sbjct: 78 ADGIRTTSVGRSATGGSRGITGTEVVAPESGECGMTILCVRFQLPPTREAALPELLGLLE 137 Query: 90 ELSPRVEIYSIDEAFCDLTGVRNCR--DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 E +P VE D A DL G D + IR L + +G LA+ Sbjct: 138 EFTPVVEALPPDRALADLRGAERYFKRDAVELASVIRVRALALHGVDCAIGAGPGPMLAR 197 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLA 207 +A A+ GV + ++ PV + G+G ++ L G+ T+ +A Sbjct: 198 MALKDARP------GVTRSVPGDAAADFLAGRPVAALPGVGAATARTLCEYGLDTLGRVA 251 Query: 208 DTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEF 240 + +++ + G ++ + Sbjct: 252 AAPLSTLQRLVGAKAGRELHEKANGVDRGRVVLY 285 >UniRef50_Q5KGG8 Eta DNA polymerase, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KGG8_CRYNE Length = 690 Score = 94.0 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 25/195 (12%), Positives = 59/195 (30%), Gaps = 10/195 (5%) Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL-DAMGIKT 202 ++ L + K + + ++ D+ +G ++ + G KT Sbjct: 260 LMSNLCSAWKKPNNQ------TILRTAAVPAFLNGRDFTDIRSLGGKLGAAIAQQFGAKT 313 Query: 203 VLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 V D+ + +++ F LRG ++ + + ++ S+S +T Sbjct: 314 VGDMLTVSLDEMQRKFGEESIWVYNILRGIDHSEVTDRVA-TKSMLASKSIRPAVTSPQQ 372 Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ-DSRD 321 Q + A +LR + + + S + + Sbjct: 373 GHQWLSILAGELNVRLRQSREIMPGLWPKTLVLSYR-QGIEPTRSRQIPFPFTRNLSTDY 431 Query: 322 IINAATRSLDAIWQA 336 I+ A + D Q Sbjct: 432 IMKYAKKLWDEATQP 446 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 50/133 (37%), Gaps = 25/133 (18%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A CD++A YA E V P++ +IA N A+ G+K K + Sbjct: 37 IAHCDIDAAYAQFEQVRLGLPDDIPLICAQ--WQSIIAVNYPARKYGIKRFTSIEDAKKM 94 Query: 62 FRRCGVVC---------------------FSSNYELYADMSNRVMSTLEELSPR--VEIY 98 + + ++Y S ++++ +E PR +E Sbjct: 95 CPHLRIQHVATYRNGESEAGYWDDVDPRTHKVSLDVYRRESLKILAIFKEKIPRGEIEKA 154 Query: 99 SIDEAFCDLTGVR 111 SIDEAF DLT + Sbjct: 155 SIDEAFLDLTPMV 167 >UniRef50_A5DE10 Putative uncharacterized protein n=2 Tax=Pichia guilliermondii RepID=A5DE10_PICGU Length = 673 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 24/146 (16%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D+NAF+A E PVV + +IA + A+ G+ D ++ Sbjct: 43 VIALVDMNAFFAQVEQTRLNLSIDDPVVCVQ--WSTLIAVSYAARKYGINRMDNVKSARE 100 Query: 61 LFRRCGVVC----------------------FSSNYELYADMSNRVMSTLEELSPRVEIY 98 + + + Y S +++ +++ VE Sbjct: 101 KCPDVILAHAAVFKKGNPYWSYVDGLPNQAEHKVSLDPYRRESRKIIKIIKQHCDVVEKA 160 Query: 99 SIDEAFCDLTGVRNCRDLTDFGREIR 124 S+DE + DL + R L +F + + Sbjct: 161 SVDECYMDLGREVHKRLLLEFPQLRQ 186 Score = 69.4 bits (168), Expect = 3e-10, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 17/182 (9%) Query: 106 DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 D + +IR + T GIA+ K LAKLA K + Sbjct: 239 DWDDICVLIGA-QVLYKIRKLIYDELSYTTSGGIARNKFLAKLAAGFNKPDNQ------T 291 Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKK-LDAM----GIKTVLDLA-DTDIRFIRKHFN 219 + ++ +DV G+G + L G+ + L + ++ I+K + Sbjct: 292 IIRSASIPNFLTNFQFNDVSGMGGKTGDTVLARFDTPPGVNSFTHLRENYTLQDIQKEYP 351 Query: 220 VV---LERTVRELRGEPCLQLEEFAPTKQEIICSRSFG-ERITDYPSMRQAICSYAARAA 275 ++ +RG+ L K + + + + YA Sbjct: 352 QDPQFAQKIYDIVRGDDKQPLRLRTDVKSMMSRKNFIPQRPVKTLFDIFSWLKVYAGDLH 411 Query: 276 EK 277 + Sbjct: 412 NR 413 >UniRef50_Q67N70 Putative uncharacterized protein n=1 Tax=Symbiobacterium thermophilum RepID=Q67N70_SYMTH Length = 539 Score = 93.7 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 80/238 (33%), Gaps = 7/238 (2%) Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERT 225 + + + + ++ LPV + + + ++L +GI + + A + + + Sbjct: 295 IVSPGAEARFLAPLPVTFLP-LPPEVQRRLQQLGITRIGEAARVSEDEWARQLGLQGRQI 353 Query: 226 VRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYC 285 R RG ++ P ++ + RS + D + + + AA A +L + C Sbjct: 354 SRWSRGIDPEPVKPAWPPRR--LARRSELGGVRDRDPLERELSRSAALLAAQLDRRGEGC 411 Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGV 345 + + ++ + + P Q ++A L + Sbjct: 412 QQVGLILELADGRVLHAERTLPRLRHTAYPIQQG---LHALLTQLLDGLRESVEVAAVTA 468 Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMK 403 +G Q+ L+DD R E++ + L+ + + W+ + Sbjct: 469 EVGLIGPVDWRQMELWDDRLLRERRERIEGALSLLHQRFPARVIGLG-MHTPTSWREQ 525 >UniRef50_A7VU61 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VU61_9CLOT Length = 150 Score = 93.3 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 7/138 (5%) Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 M+ + A A +LR + R I ++ + + + LL+ T + +I Sbjct: 1 MKMILYVLADSVARRLREQGLKGRTIHISVRDNS------LFSFTRQKTLLSYTNLTGEI 54 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFF-SQGVAQLNLFDDNAPRPGSEQLMTVMDTLN 381 A ++ + G+ + D +Q LF D R E+L +D L Sbjct: 55 AREALSLFREHYRWKRPVRSIGISVSDLAADTICSQTGLFCDEVKREKMERLDKALDRLK 114 Query: 382 AKEGRGTLYFAGQGIQQQ 399 + G + A ++ Sbjct: 115 VRFGTFAVQPAVLLKDRK 132 >UniRef50_B9PWD1 DNA polymerase eta, putative n=3 Tax=Toxoplasma gondii RepID=B9PWD1_TOXGO Length = 1091 Score = 92.5 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 33/115 (28%), Positives = 48/115 (41%), Gaps = 9/115 (7%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FY E +P+VV IA N A+ LG+K GD + Sbjct: 14 VVVHLDLDCFYCQVEHRRLGIPVSEPLVV--RQWNLAIAVNYAARRLGIKRGDLCTVLEK 71 Query: 61 LFRRCGVVCFSSNYE-------LYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT 108 F ++ S + Y S+ V+S + E P VE SIDE F DL+ Sbjct: 72 KFPNLHIIHVPSRPDTDKVSLERYRLASDEVLSIIVEQYPCVERASIDEVFIDLS 126 Score = 54.4 bits (129), Expect = 9e-06, Method: Composition-based stats. Identities = 36/260 (13%), Positives = 77/260 (29%), Gaps = 25/260 (9%) Query: 133 LTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRIS 192 T+ +A++K LAK A+ K ++ L E + L + D+ G + Sbjct: 330 FTMSGAVARSKFLAKTASAKFKPDRQ------VLVPSELAADFLGPLELRDLRGFRGKRG 383 Query: 193 KKLDAMGIK--TVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 +++ A V DL + + E L+G+ + + + ++ Sbjct: 384 RRIAAAFPDKPRVKDLREIPFDHLVTKLGREEAESLSNVLKGDLEGEGVKANLRVKSMLA 443 Query: 250 SRSFGERITDYPS-------MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 ++F D + + + E + + Sbjct: 444 FKAFPPGAADPVQLAMNRGGLADWLSGLCLELFRRAEQEFSAYKRAPKTLTVYYRTGPPW 503 Query: 303 YYGNSASVKLLTPTQ-----DSRDIINAATRSLDAIWQAGH----RYQKAGVMLGDFFSQ 353 + S S L + +I A +L + + K G+ + DF + Sbjct: 504 FQQLSRSGPLSPRRKALAAPTLEEIQRATLAALLRLSRDCGARLPPCVKIGLAVSDFENA 563 Query: 354 GVAQLNLFDDNAPRPGSEQL 373 + SE+L Sbjct: 564 ELEATPRITQFFQVGVSERL 583 >UniRef50_B9Q2G6 DNA polymerase iota, putative n=2 Tax=Toxoplasma gondii RepID=B9Q2G6_TOXGO Length = 1309 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 66/213 (30%), Gaps = 21/213 (9%) Query: 9 AFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVV 68 +A E P + V + + G ++ P + Sbjct: 380 CGFAQIEKSQHPGERERQVA-------------EKKREKGERLFHPSMGGGEAAPAQHTA 426 Query: 69 CFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVL 128 S S+R + + + A+ + + T IR + Sbjct: 427 SRSPTDGP--QESHRHRENDADEGEKSRDEEQESAYLPCPCLLSLAIATHLASAIRRYIG 484 Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG 188 LT GI+ K+LAKLA K ++ L + +R ++ L + + G+G Sbjct: 485 THMGLTSTAGISTNKSLAKLAGAFNKPSRQ------TLLLPQHRRGFLAPLALQKIPGVG 538 Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV 221 + + L G++T DL + + Sbjct: 539 SALVRLLSRAGLRTCADLLAVSLPRLAAILEAS 571 Score = 61.7 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 30/118 (25%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++ FYA E + P + GKPV V ++ N A+ ++ Sbjct: 205 VIIHVDMDCFYAQVEELLDPSIVGKPVAV--RQKQLIVTSNLVAR-------QKPWQA-- 253 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD 118 S+ V+ + V+ +D+ F D T + + Sbjct: 254 -------------------ASHAVVKAMVGEELLVQRLGLDDFFIDATALVAAGGPAE 292 >UniRef50_A1VVG9 DNA-directed DNA polymerase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VVG9_POLNA Length = 150 Score = 92.1 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 49/144 (34%), Positives = 68/144 (47%), Gaps = 4/144 (2%) Query: 281 EHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRY 340 + +S + T+PF ++ Y S +V L PT DSR I+ AA L I++ G Y Sbjct: 6 RQYWLSRVSWAVHTNPFRQHDTQYSRSLTVPLRWPTSDSRLIVQAALHGLQQIYRPGLNY 65 Query: 341 QKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG---IQ 397 KAGVML AQ L P E LM MD +N + G GT+ A G Sbjct: 66 AKAGVMLLGLQHGPAAQHEL-ALGDDAPRLEALMAAMDRINERHGPGTVALASAGHFAEN 124 Query: 398 QQWQMKRAMLSPRYTTRSSDLLRV 421 + W M++A+ +P Y R SD+ Sbjct: 125 RIWSMRQALKTPDYMARWSDIPTA 148 >UniRef50_B9BQL7 UmuC protein n=2 Tax=Burkholderia multivorans RepID=B9BQL7_9BURK Length = 133 Score = 91.7 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 2/110 (1%) Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 PT D+ ++ AA L I++ G +Y KA ML + +QGV Q +LF A ++ Sbjct: 26 TVPTSDTLRLVAAALYGLKRIYKPGFKYAKARFMLTELQAQGVEQGDLFAPEAS--KRDR 83 Query: 373 LMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 LM +D +N + GR TL Q W M + +P YTT DL + Sbjct: 84 LMAELDAVNDRFGRNTLRVGNVEGHQAWHMAQNAKTPSYTTDWGDLPVAR 133 >UniRef50_C9SAM9 Putative uncharacterized protein n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SAM9_VERA1 Length = 609 Score = 91.4 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 49/419 (11%), Positives = 99/419 (23%), Gaps = 113/419 (26%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAK------------ALGVKMGD 53 D + FYAS P L P+ V + N A+ A + Sbjct: 63 DYDCFYASVLESQNPALKSLPLGV--KQKSILATCNYVARARGVRKLMRISAARKICPDL 120 Query: 54 PWFKQKDLFRRCGV------------------------VCFSS-NYELY------ADMSN 82 + +DL V V + Y Sbjct: 121 VVVEGEDLTPFRDVSKSLYAFLRGHSWSGKVERLGLDEVFMDVTDMINYNMSCLNKLTLA 180 Query: 83 RVMSTLEELSP-------------RVEIYSI--DEAFCDLTGVRNCRDLTDFGREIRATV 127 L + P RV E + + +R + Sbjct: 181 DSFFCLSKTDPEKGFPCDLTKMAGRVHGVPPPAGEQQLENQAYVRLLLGSHLAWYLRTNI 240 Query: 128 LQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGI 187 ++ T G+A K L+KL K + T + M + + + GI Sbjct: 241 EEKYGFTSACGVATNKLLSKLVGSKKKPRNQTT---LLALENGSAVDFMDSYTIRKIPGI 297 Query: 188 GRRISKKLDA--MGIK------------TVLDLADTD---IRFIRKHFN------VVLER 224 G + ++ L+ + + + + + + R Sbjct: 298 GGKTTQLLEKRLLNFHKEIDSYETESALSAQQVRLHPEIYPETLETLLSGPGSEQGIGVR 357 Query: 225 TVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR----- 279 L G ++++ +I ++ + + + + + A ++R Sbjct: 358 IWNLLHGVDYTEVKDARDVPSQISIEDTYRQ-LDSLVQIEEELKKLAISLLRRMRVDLTT 416 Query: 280 ---------------------SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQ 317 + R + I+ P + S S K Sbjct: 417 ANDALTHSSSVDQNTLEGQSQRWMAHPRTLRLSIRLWPVEGERDDWNFSRSSKSQPMPN 475 >UniRef50_Q5BYF2 SJCHGC07422 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q5BYF2_SCHJA Length = 179 Score = 91.0 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AFYA+ E +P+L PV V SN + N A+ GV+ G P F K L Sbjct: 113 IVHVDMDAFYAAVEIRDQPELRHHPVAVGSN--SMLSTSNYIARRFGVRAGLPGFLGKKL 170 Query: 62 FRRCGVVCF 70 + ++ Sbjct: 171 CPQLKIIPC 179 >UniRef50_B4UDR0 Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. K RepID=B4UDR0_ANASK Length = 569 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 59/388 (15%), Positives = 101/388 (26%), Gaps = 30/388 (7%) Query: 23 WGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSN 82 G ++ +G V+ A+A GV+ G + R V + +L Sbjct: 32 RGLAALLAVLEEGRVVCCTPAARAAGVRPGQSAAEALAACGRLETVVRDAAADL--AALR 89 Query: 83 RVMSTLEELSPRVEIYSIDEAFCDL-------------TGVRNCRDLTDFGREIRATVLQ 129 + L ++P VE+ + D D + Sbjct: 90 ALAEVLLGIAPAVEVVAPDALLLDAGAARLLAAGPGAGAPSAAFGPGEERLARRAVQAAV 149 Query: 130 RTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGR 189 +A + A R G V ++ A G+ Sbjct: 150 DMGYAARAVVATGRGPATALAR----HGRFDGAVHGVAPGGVAAAAALAGLPLAALGLAP 205 Query: 190 RISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 ++ +L A+G+ LA + F R R RGE L P Sbjct: 206 AVAGRLAAVGVGDAGALARLPEGTLAHRFGPEGVRAARLARGEDVSPLVPHVPET-LPQE 264 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSAS 309 S + + A R A +L + + P Sbjct: 265 SLELEAPAESAEPLLFGLKRLADRVAARLAGRGLGATRLRLVLALDPRGEERI------Q 318 Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPG 369 V L P+ + + L A+ G ++ + QL D Sbjct: 319 VPLSQPSASAARWLVPVKEHLFALRLPGA-VTALRLVAAEVAPVAAEQLAFGDRPEAV-- 375 Query: 370 SEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 L V+ L + G G L+ A + Sbjct: 376 -AALEGVLARLAVRLGDGALFAAEPVAR 402 >UniRef50_C5DLU3 KLTH0G03586p n=2 Tax=Saccharomycetaceae RepID=C5DLU3_LACTC Length = 621 Score = 91.0 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 50/344 (14%), Positives = 93/344 (27%), Gaps = 64/344 (18%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A DVNAF+A E + PVV + +IA + AK G+ D F Sbjct: 26 VAHIDVNAFFAQVEQIRCQYSRDDPVVCVQ--WNSIIAVSYAAKKFGISRMDTVFDAFKK 83 Query: 62 FRRCGVVC--------------------------------FSSNYELYADMSNRVMSTLE 89 V + + Y S +++ Sbjct: 84 CEGLMPVHTAVFKKGEDFWQYHDDCGSWHTDESKKLSPELHKVSLDPYRRESRKILKIFS 143 Query: 90 ELSPRVEIYSIDEAFCDLTG---VRNCRDLTDFGREIRATVLQRTHL---TVGVGIAQTK 143 E VE S+DE F DL D + G E T + G+ + Sbjct: 144 EWCDLVEKASVDEVFLDLGRNVFSLLLIDESQKGFESIRTQFREGSYDLDDYLPGVPKDV 203 Query: 144 TLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA-MGIKT 202 + A +R + + + + I ++I +++ +G T Sbjct: 204 EINIEAGDYN-PQKRTLY-----DDWDDVLFCLGST-------ITKKIRDQIEEVLGYTT 250 Query: 203 -VLDLADTDIRFIRKHFNV-VLERTVRELRGEP-----CLQLEEFAPTKQEIICSRSFGE 255 + + +F + VR E L+L F + Sbjct: 251 SCGIARTKTVAKLASNFKKPNAQTIVRNCNIEDFLDNESLELTSFWSMGGIFGKEVTQLL 310 Query: 256 RI---TDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSP 296 + +R + + +R + + + + Sbjct: 311 DLPSERSLKYIRDSWPVSSWELGAHMREKIRKLNSGKEKLYSLD 354 Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 39/295 (13%), Positives = 88/295 (29%), Gaps = 46/295 (15%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + ++IR + + T GIA+TKT+AKLA++ K + + Sbjct: 231 GSTITKKIRDQIEEVLGYTTSCGIARTKTVAKLASNFKKPNAQ------TIVRNCNIEDF 284 Query: 176 MSA--LPVDDVW---GI-GRRISKKL---DAMGIKTVLDLADTDIRFIRKHFNV------ 220 + L + W GI G+ +++ L +K + D + H Sbjct: 285 LDNESLELTSFWSMGGIFGKEVTQLLDLPSERSLKYIRDSWPVSSWELGAHMREKIRKLN 344 Query: 221 ----------------VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 + ++ + RG+ + K + G Y Sbjct: 345 SGKEKLYSLDDAQVQQMADKIFQLARGDFKMPFNPRPVIKSMMSNKNLPGNSCKHYVDCL 404 Query: 265 QAICSYAARAAEKLRSEHQYCRFIST----FIKTSPFALNEPYYGNSASVKLLTPTQDSR 320 + ++ +++ Q I + T + +V ++D Sbjct: 405 AWLEVFSGDLIGRIKELEQEYERIIVPKTITVMTKTRNYERHTRRTTLTVGGQVKSKDLM 464 Query: 321 DIINAATRSLDAIW---QAGHRYQKAGVMLGDFF--SQGVAQLNLFDDNAPRPGS 370 + R L++++ + + L +F G +++F Sbjct: 465 EFGTKLIRELESLYGGSDTYYPLTGIAMSLSNFEIHETGRTIVDMFGRQTQVVRK 519 >UniRef50_C7CNB5 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CNB5_METED Length = 455 Score = 90.2 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 67/161 (41%), Positives = 98/161 (60%), Gaps = 1/161 (0%) Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179 + TV R + V VGI+ TKTLAK+AN AKK +GGV L + Q ++ + Sbjct: 43 LLRRQRTVSGRCEIPVCVGISTTKTLAKVANRTAKKDPL-SGGVCYLPDEASQTAALAKM 101 Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + DVWGIGR ++ L A+ I + L L D + IR+ FNVVL+RTV EL+G PCL LE+ Sbjct: 102 ELGDVWGIGRGLAPPLAALSITSPLKLRDANPTRIRERFNVVLQRTVMELQGTPCLDLEQ 161 Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRS 280 +P + I CSRSF + + + +A+ +Y + AA+K+R+ Sbjct: 162 DSPDSKTICCSRSFARAVEGFDELAEALTAYTSYAAQKMRA 202 >UniRef50_UPI00006CB3A6 hypothetical protein TTHERM_00659050 n=1 Tax=Tetrahymena thermophila RepID=UPI00006CB3A6 Length = 455 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 40/373 (10%), Positives = 112/373 (30%), Gaps = 25/373 (6%) Query: 3 ALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLF 62 D R +P +L N+ + N +A LG+++G + +++ Sbjct: 60 LHLD-------VLLSERQQDKNQP-CILINSSNQICQLNNQAFQLGIRVGMNTSEIENII 111 Query: 63 RRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIY----SIDEAFCDLTGVRN---CRD 115 + ++ N + ++ N ++ L+++ VE+ +I D+T + Sbjct: 112 QNI-LILKMQNQQSSQEVFNSILRYLQQIDKDVEVDFNNKNIYYFLIDVTNYMTEKGFEN 170 Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 D I + + GI L+ LA + Q + + ++ Sbjct: 171 PADIASSIANYIHNEFKVESFCGIGANTLLSFLAAQMSFHSILQNSCISRIQEIKDFVSH 230 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLER-TVRELRGEPC 234 + L + + + + L+ M I ++ D+ + ++ I + F + ++ G Sbjct: 231 L-HLDIKMMTNLSESLLASLEKMRIMSINDI-NNNLIQIYQTFPQNVTNSLLQIYYGVSR 288 Query: 235 LQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKT 294 ++ SR ++ + + ++ + + + Sbjct: 289 NYHN-VQVEIDQLKVSRMLKLGEYSIQQLQYLVDQIVEQITLDMKHYKRIAKIAKLQLTK 347 Query: 295 SPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQG 354 L + + + + L ++ QK + + + Sbjct: 348 IDHT-----NIVVKREILRIDSDYFDLLKSECFQMLKSLQIQNLLLQKITIQVFEMIPID 402 Query: 355 VAQLNLFDDNAPR 367 + Sbjct: 403 SIINSNITFAQRF 415 >UniRef50_Q6CDC9 YALI0C01573p n=1 Tax=Yarrowia lipolytica RepID=Q6CDC9_YARLI Length = 640 Score = 89.8 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 41/250 (16%), Positives = 71/250 (28%), Gaps = 55/250 (22%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D++AF+A E V G PV +IA A+A G+ + + L Sbjct: 26 IVHLDMDAFFAQVEQVRLGLPPGTPVAC--RQWDGLIAVGYAARASGITRHMRAPEAQKL 83 Query: 62 FRRCGVVC---------------------FSSNYELYADMSNRVMSTLEELSPRVEIYSI 100 + + + + Y +V++ +++ S VE S+ Sbjct: 84 CPNLVMAHAASFKRGEDMWEYHANPSADDYKISLDPYRQAGKKVLNIVKQYSSVVEKASV 143 Query: 101 DEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 DE++ DL + + A H K Sbjct: 144 DESYLDLGP--RIFNEIMIAFPQLQLLDNDL---------DNFLPAPPRAHELKIRGYNW 192 Query: 161 GGVVDLSNLERQRKLMSALPVDD----------VWGIGRRISKKLDA-----------MG 199 G+ L + + + V D V G RISK++ G Sbjct: 193 DGLGVLEIVTDVSRFDPDIRVHDDTMVTDWDDLVLMFGARISKRMREQVYEELKYTCSAG 252 Query: 200 IKTVLDLADT 209 I +A Sbjct: 253 IARCRSVAKL 262 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 37/310 (11%), Positives = 94/310 (30%), Gaps = 31/310 (10%) Query: 83 RVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQT 142 +++ + P + ++ D D + + +R V + T GIA+ Sbjct: 199 EIVTDVSRFDPDIRVH-DDTMVTDWDDLVLMFGA-RISKRMREQVYEELKYTCSAGIARC 256 Query: 143 KTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI-SKKLDAMGI- 200 +++AKLA+ K + + + + D+ G+G ++ + L+ +G+ Sbjct: 257 RSVAKLASAQNKPNNQ------TVVRAGALNNYLKKKSLTDIGGMGGKLGEEVLEKLGLD 310 Query: 201 ----KTVLDLADTDIRFIRKHFNVV--LERTVRELRGEPCLQLEEFAPTKQEIICSRSFG 254 + + + +++ E+ RG L+ K + Sbjct: 311 KESKDNITQVQALSKQQLQQKLQNASLTEKVFNLARGNLYRGLKTRIELKSMLSAKNFAR 370 Query: 255 ERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI----STFIKTSPFALNEPYYGNSASV 310 + D + +A A ++ + + ++ + F P S Sbjct: 371 VPLKDRKEAELWLVVFAGELAMRIVEHEKELGTCRRPRTVSLQHARFK---PMVKRSRQQ 427 Query: 311 KLLTPTQD--SRDIINAATRSLDAIWQAG----HRYQKAGVMLGDFF--SQGVAQLNLFD 362 L + ++ A + L I + + + F G + + F Sbjct: 428 DLPLVHTNKLKEELFAAGVKLLKLIENEPEHDAYPISMLSLSVTGFVELPAGASIGHFFK 487 Query: 363 DNAPRPGSEQ 372 + Sbjct: 488 TITTEAREKA 497 >UniRef50_Q04049 DNA polymerase eta n=8 Tax=Saccharomycetaceae RepID=POLH_YEAST Length = 632 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 34/142 (23%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A D+NAF+A E + PVV + +IA + A+ G+ D + Sbjct: 26 IAHIDMNAFFAQVEQMRCGLSKEDPVVCVQ--WNSIIAVSYAARKYGISRMDTIQEALKK 83 Query: 62 F--------------------------------RRCGVVCFSSNYELYADMSNRVMSTLE 89 ++ V + E Y S + + + Sbjct: 84 CSNLIPIHTAVFKKGEDFWQYHDGCGSWVQDPAKQISVEDHKVSLEPYRRESRKALKIFK 143 Query: 90 ELSPRVEIYSIDEAFCDLTGVR 111 VE SIDE F DL + Sbjct: 144 SACDLVERASIDEVFLDLGRIC 165 Score = 70.9 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 38/303 (12%), Positives = 88/303 (29%), Gaps = 53/303 (17%) Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + + IR ++ T G++ TK + KLA++ K + + + Sbjct: 238 LALGSQVCKGIRDSIKDILGYTTSCGLSSTKNVCKLASNYKKPDAQ------TIVKNDCL 291 Query: 173 RKLMS--ALPVDDVWGIGRRISKKL-------DAMGIKTVLDLADTDIRFIRKHFNVV-- 221 + + W +G + K+L IK + + + +++ + Sbjct: 292 LDFLDCGKFEITSFWTLGGVLGKELIDVLDLPHENSIKHIRETWPDNAGQLKEFLDAKVK 351 Query: 222 -------------------LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPS 262 E+ + RG L L K + G+ Sbjct: 352 QSDYDRSTSNIDPLKTADLAEKLFKLSRGRYGLPLSSRPVVKSMMSNKNLRGKSCNSIVD 411 Query: 263 MRQAICSYAARAAEKLRSEHQY------CRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 + + A +++ Q R +S +KT + + Y S V Sbjct: 412 CISWLEVFCAELTSRIQDLEQEYNKIVIPRTVSISLKTKSYEV----YRKSGPVAYKGIN 467 Query: 317 QDSRDIINAATRSLDAIWQAGH-----RYQKAGVMLGDFF--SQGVAQLNLFDDNAPRPG 369 S +++ + + + G K + + +F +++F + Sbjct: 468 FQSHELLKVGIKFVTDLDIKGKNKSYYPLTKLSMTITNFDIIDLQKTVVDMFGNQVHTFK 527 Query: 370 SEQ 372 S Sbjct: 528 SSA 530 >UniRef50_A3LN71 DNA polymerase eta subunit n=1 Tax=Pichia stipitis RepID=A3LN71_PICST Length = 733 Score = 89.0 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 55/443 (12%), Positives = 123/443 (27%), Gaps = 106/443 (23%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + +L D+NAF+A E + PVV + +IA + A+ G+ D K Sbjct: 45 VISLIDLNAFFAQVEQLRLGLPVETPVVCVQ--WSTLIAVSYAARKFGIGRLDTLQSAKQ 102 Query: 61 LFRRCGVVC----------------------FSSNYELYADMSNRVMSTLEELSPRVEIY 98 + + Y S +++ ++ VE Sbjct: 103 KCPNLVCAHAAVFKKGESHWAYTKGLPNQATHKVSLDPYRRESRKIVKIFQQHCDLVEKA 162 Query: 99 SIDEAFCDLT-----------GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 S+DE++ DL + +D+ + T+ + V + + Sbjct: 163 SVDESYLDLGRLVYKKLLSLFPLLAEGQDSDYMPSLPDTLPEELQFRGVVIKSTEEENLI 222 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW-------------GIGR-RISK 193 N Q+ G + + + L+ ++ V D+ GI + Sbjct: 223 QNNTIMSLSQQFPEGPPTIGDWDDVCMLIGSMIVLDIRKALYDEMGYTTSAGIASNKQVA 282 Query: 194 KLDA-----------MGIKTVLDLADTDIRFIRKHFNVVLERTVRELR-----GE----- 232 KL T L + ++ + + +++LR G Sbjct: 283 KLAGGFKKPDNQCVIRNRSTYSFLNNFELNDVTSMGGKTGDFVLQKLRVPPDKGISYIRE 342 Query: 233 ------------PCLQLEEFAPTK---------------QEIICSRSF--GERITDYPSM 263 + L + + ++ ++F + Sbjct: 343 NFTLEAIEEEFNDDIPLAKKIYEIVRGNHRRELVNRMDVKSMMSRKNFLAKHPVETLSDA 402 Query: 264 RQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT---QDSR 320 I +A ++ + +S ++ + S+ L T + + + Sbjct: 403 DSWIKVFAGDLYNRMIELDEENLRLSMSQVSNK-EKGVIKRPKTLSINLGTSSGIRRSKQ 461 Query: 321 DIINA---ATRSLDAIWQAGHRY 340 + R + Q G+R Sbjct: 462 AQLMQYSSLDRLWEHFEQIGYRI 484 >UniRef50_C5CQX8 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CQX8_VARPS Length = 449 Score = 88.3 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 37/331 (11%), Positives = 86/331 (25%), Gaps = 26/331 (7%) Query: 82 NRVMSTLEELSPRVEIYSIDEA-FCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 + +P V DEA +++ A + Sbjct: 24 EALGWWALRYTPHVA--WQDEALMLEVSACERLWGGRSSLMRQLAHENPAPGAVMRGAQG 81 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 T +A ++ R + + + LP+D + + L +G Sbjct: 82 ATSPIALARLRLFERN------------ENRPKDIPAGLPLDTLTAAHPHL-DLLARLGC 128 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 +T ++A + + F L + + G + Sbjct: 129 RTWGEVAALPRGGLTRRFGAELRKALDTAWGLSPESHDWLTLP-DVFEQKLELPALAETA 187 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS--PFALNEPYYGNSASVKLLTPTQD 318 P + + A LR+ + R + F +V+ PTQD Sbjct: 188 PELMWSANRLLAALQIWLRARQRGARALELQWTLDLKRFNGVNLPPHQQVTVRTAEPTQD 247 Query: 319 SRDIINAATR--SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 + + +L + + + A + ++L + Sbjct: 248 MAHLRRLLSEKLALTTLAAPASWLRL-----RTLETDPWAGASTSFLPEDNRKGDKLHEM 302 Query: 377 MDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 ++ L+ + G + + + K+A Sbjct: 303 VERLSVRLGAHQVVVPAAQADHRPERKQAWR 333 >UniRef50_Q4HDP3 Putative uncharacterized protein n=1 Tax=Campylobacter coli RM2228 RepID=Q4HDP3_CAMCO Length = 269 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 70/226 (30%), Gaps = 27/226 (11%) Query: 166 LSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTD---IRFIRKHFNVVL 222 L + +RKL P++D W IG+ + KL ++GI + DLA + + F V Sbjct: 45 LDEMLYRRKLWQHTPINDFWRIGKGYATKLKSIGINNMGDLARYSLNNKDKLYQIFGVNA 104 Query: 223 ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI---TDYPSMRQAICSYAARAAEKLR 279 E + G ++ + S+ + + + R + +L Sbjct: 105 ELLIDHAWGFESCTMQ-AIKEYKSKHISKVMAKVLPEPYSFKKARDMLKEIVDHMVLELI 163 Query: 280 SEHQYCRFISTFIKTSP--------FALNEPYYGNSASVK--------LLTPTQDSRDII 323 ++ C I ++ + S+ L T I Sbjct: 164 EQNLTCNQIVLDVQYDKESLEKVQSYNGPMSKDSYGRSIPKNAHSTINLDYHTSSLEAIC 223 Query: 324 NAATRSLDAIWQAGHRYQKAGVMLGDFFSQGV----AQLNLFDDNA 365 N D I A +K + L + + +LF D Sbjct: 224 NKGLELFDLIVNADFLIRKISLTLNNVVKNDTIKKIKEPSLFTDLE 269 >UniRef50_C4Y9R5 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y9R5_CLAL4 Length = 748 Score = 88.3 bits (217), Expect = 6e-16, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 24/129 (18%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 L D+NAF+A CE + PVV +IA + A+ G+ D ++ Sbjct: 44 IGLIDLNAFFAQCEQIRLGKTIDDPVVCCQ--WQSLIAVSYAARKYGIGRMDSLQSAREK 101 Query: 62 FRRCGVVC----------------------FSSNYELYADMSNRVMSTLEELSPRVEIYS 99 V + + Y S +++ L+ VE S Sbjct: 102 CPGLIVGHAAVFRKGEAHWQYLDKLPDQSLHKVSLDPYRRESRKIIKVLKRECDLVEKAS 161 Query: 100 IDEAFCDLT 108 +DE + D Sbjct: 162 VDECYLDFG 170 >UniRef50_B6K9Y1 DNA polymerase, putative n=1 Tax=Toxoplasma gondii ME49 RepID=B6K9Y1_TOXGO Length = 1613 Score = 87.9 bits (216), Expect = 6e-16, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 64/213 (30%), Gaps = 21/213 (9%) Query: 9 AFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVV 68 +A E V + + G ++ P ++ Sbjct: 527 CGFAQIEKSQHSRERETQVA-------------EKKREKGERLFHPSMGGEEAAPAQHTA 573 Query: 69 CFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVL 128 S S+R + + + A+ + T IR + Sbjct: 574 SRSPTDGP--QESHRQRENDADEGEKSRDEEQESAYLPCPCLLPLAIATHLASAIRRYIG 631 Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG 188 LT GI+ K+LAKLA K ++ L + +R ++ L + + G+G Sbjct: 632 THMGLTSTAGISTNKSLAKLAGAFNKPSRQ------TLLLPQHRRGFLAPLALQKIPGVG 685 Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV 221 + + L G++T DL + + Sbjct: 686 SALVRLLSRAGLRTCADLLAVSLPRLAAILEAS 718 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 5/92 (5%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKA--LGVKMGDPWFKQ 58 + D++ FYA E + P + GKPV V ++ N A+ V+ G + Sbjct: 205 VIIHVDMDCFYAQVEELLDPSIVGKPVAV--RQKQLIVTSNLVARQKPWQVRKGIYMPEA 262 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEE 90 VV + + Y +S++++ L+E Sbjct: 263 LRRCPSL-VVKNGEDLDKYRRVSDQILHALQE 293 >UniRef50_Q86ZI6 Related to DNA Polymerase iota (POLI) n=3 Tax=Sordariaceae RepID=Q86ZI6_NEUCR Length = 753 Score = 87.9 bits (216), Expect = 7e-16, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 5/110 (4%) Query: 6 DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65 D++ FYA P L P+ + + N A+ LGVK + Sbjct: 49 DLDCFYAQVYENKTPSLKSLPLGI--RQKSLLATCNYPARRLGVKKLMSIASALAICPDL 106 Query: 66 GVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEAFCDLTGVRNC 113 +V + + D+S R+ + L + RVE +DE + D++ + Sbjct: 107 VIVDGE-DLTPFRDVSKRLYALLRSYSWNDRVERLGLDEVWMDVSDIIEY 155 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 70/232 (30%), Gaps = 42/232 (18%) Query: 129 QRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN-LERQRKLMSALPVDDVWGI 187 + T GI+ K LAKL + K + T + + E ++ M + + + GI Sbjct: 235 EEEGYTTACGISTNKLLAKLVGNVNKPRNQTTLLSLGPDDGEETVQRFMGSHQLRKIPGI 294 Query: 188 GRRISKKLDAMGIK---------------TVLDLADTDIRFIRKHFNV------------ 220 G + + L I TV DL K ++ Sbjct: 295 GGKTAAALSDYFISQSKPGSSSPPNPKEITVDDLLSCPGLSPSKLDSLLSSLSSSSSTGT 354 Query: 221 -VLERTVRELRGEPCLQLEEFAPTKQEIICSRSFG-ERITDYPSMRQAICSYAARAAEKL 278 + + L+G ++ +I ++ + +R+ + +++ Sbjct: 355 GTGKHILSLLQGHDPSPVKPARSIPTQISIEDTYFSCPLVTIEQIRRELVKITGSLLKRM 414 Query: 279 R-------SEHQYCR----FISTFIKTSPFALNEP-YYGNSASVKLLTPTQD 318 + + R ++T +T P Y S S L + Sbjct: 415 KTDLMDDDKKRWLARPKTLRLTTRPRTDPKEGRGYGYGRVSKSQGLPGYVFN 466 >UniRef50_B6AK40 DNA polymerase eta, putative n=1 Tax=Cryptosporidium muris RN66 RepID=B6AK40_9CRYT Length = 717 Score = 87.5 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 90/281 (32%), Gaps = 30/281 (10%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 +R +LQ + T GI+ K LAKL K + + + Sbjct: 301 GATIIYRVRNRLLQDLNYTCSAGISINKMLAKLVCSLRKPNGQS------VLLSRWINQY 354 Query: 176 MSALPVDDVWGIGRRISKKLDAM--GIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGE 232 M LP+ + +G ++ K + ++ DL + + K F E RG Sbjct: 355 MGILPILKLRLLGGKLGKLVSEKLPMVRMSSDLLQYNKGTLIKLFGEKNGEYLYNTCRGI 414 Query: 233 PCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFI 292 + E + I+ S++F + + + + + +++ +E+ ++ ++ + T + Sbjct: 415 DLEAVIETQH-YRSILSSKNFYSGLDNLDEIFKWLHIFSSELSERSKNLYKTLKIRPTKV 473 Query: 293 KTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSL-DAIWQAG-------------- 337 + S+ T ++ I A + ++ Sbjct: 474 GVTIRNKLSQNRTRVQSINYSDHTPNTDIIYKTAKFIFLNRFYEPNNSNIQKKESDINIS 533 Query: 338 -----HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQL 373 + GV L + L D + + +L Sbjct: 534 YIKDIFPCKYLGVSLHNLIKNDSKFDILQFDISNNKTNNKL 574 Score = 86.3 bits (212), Expect = 2e-15, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 56/152 (36%), Gaps = 21/152 (13%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D++AF+ + KP+VVL VIA N KA G+K G + Sbjct: 75 IIALIDMDAFFTQVQHKICNIPKDKPLVVLQ--RNTVIAVNYPGKARGIKRGMKLQEALS 132 Query: 61 LFRRCGV----------------VCFSSNYELYADMSNRVMSTLEELSP--RVEIYSIDE 102 ++ V + E+Y + S + + P +++I SIDE Sbjct: 133 IYPDLAVPETTYYNDKIEDNNNYNIKKISLEIYREASREIFDNIANYIPKCKIQISSIDE 192 Query: 103 AFCDLTGVRNCRDLTDFGREIRATVLQRTHLT 134 A+ DL+ L ++ + Sbjct: 193 AYIDLSENIKLI-LEYIVLVLKGERSDYRGIE 223 >UniRef50_A6GQI5 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GQI5_9BURK Length = 428 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 34/323 (10%), Positives = 65/323 (20%), Gaps = 22/323 (6%) Query: 84 VMSTLEELSPRV-----EIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVG 138 + SP V + + ++ + + Sbjct: 1 MFELASHYSPVVCWRQDQHHEYVGWLVEVHSSFRLFGGAQALLSQLWQSADEFPGELQLA 60 Query: 139 IAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAM 198 T T A +A Q + L+ E + ALP+ + ++ Sbjct: 61 NHHTATGAWWLGKSA-PAGNQDDFLAMLNFNENS---LLALPISVL-DCDAKLQITWRQC 115 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAP--TKQEIICSRSFGER 256 G + DL K F + G P + Sbjct: 116 GFGRLGDLWRLPRDGFLKRFGAQALAELDSGFGVQNKLATSTVPHKPADTFEQEKELPFH 175 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 + + L+ + R + + T Sbjct: 176 SDRLDLIEHHAQALLDAVCNWLKQQKHGTRELHWAFIHTHGEEVLHLRS-------AQAT 228 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 L + + V + D A + Sbjct: 229 DCLDTWRRLLHHQLGRMQFED-DIRNLRVQCTHSELLPNVNHSFLPDPAEGARNW--NNT 285 Query: 377 MDTLNAKEGRGTLYFAGQGIQQQ 399 D L A+ G T+ FA + Sbjct: 286 CDILRARLGEQTVLFAATDSDPR 308 >UniRef50_C7I5M5 Putative uncharacterized protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I5M5_THIIN Length = 458 Score = 86.7 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 36/339 (10%), Positives = 93/339 (27%), Gaps = 16/339 (4%) Query: 78 ADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLT-DFGREIRATVLQRTHLTVG 136 A + + + +PRV + ++ + +R ++V Sbjct: 18 ASAQHGLALWALQFTPRVTLLDE-AVLMEVQASLRLFGGAGELAARVRVDSPALGVVSVA 76 Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLD 196 LA G + + + LP+ + + ++ L Sbjct: 77 WAATALGALALARAQREDVGHACDSGGGGEVDTTLLAERLDPLPLTVLT-VTAPLADTLA 135 Query: 197 AMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 +G +T+ +L + + F L + + G + + Q R Sbjct: 136 QLGCRTLGELRALPRGGLTRRFGPALVEALDQAYGL-RSPVFSWVTLPQTFCARLDLMAR 194 Query: 257 ITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPT 316 + + ++ A + L + + + + G++ ++ P Sbjct: 195 VENAMALVFAAKRLLLQLQGWLVARNAGVTAFTLRWQHDGLRHQPGEEGDALVIRTAQPM 254 Query: 317 QDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV 376 +D + L + A + + + +L D A + L V Sbjct: 255 RDMAHLSRLLAEQLARVQLA-APVETLILEVDSVCDYRPPTASLLPDAA--EDRDTLNRV 311 Query: 377 MDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRS 415 ++ L A+ G + + P + + Sbjct: 312 LERLAARLGAQRVVRPVLREDAR---------PEWAQQW 341 >UniRef50_C5NXP3 DNA-damage repair protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NXP3_9BACL Length = 148 Score = 86.0 bits (211), Expect = 3e-15, Method: Composition-based stats. Identities = 21/142 (14%), Positives = 49/142 (34%), Gaps = 5/142 (3%) Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + A + A +LR + + + I S + + + PTQ ++ + + Sbjct: 1 MSEMAEQVAIRLRRVKKKAKSVHIHISYSRIESKKSINASKK----INPTQSTKQLTDHV 56 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 + + G + V + + LFDD ++ +DT+ K G Sbjct: 57 LSLFRSKYD-GGAVRSIAVRYDNLIDDNLTIYTLFDDIETIEKQRKIDKTLDTIRDKYGF 115 Query: 387 GTLYFAGQGIQQQWQMKRAMLS 408 ++ ++ +R+ L Sbjct: 116 LSVQNGSMLMEGSRVKERSKLV 137 >UniRef50_Q12AY4 Putative uncharacterized protein n=1 Tax=Polaromonas sp. JS666 RepID=Q12AY4_POLSJ Length = 476 Score = 85.2 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 93/344 (27%), Gaps = 28/344 (8%) Query: 78 ADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT----HL 133 A M V S +PRV + D+TG ++ L L Sbjct: 15 AAMQRAVASMALGFTPRVALVDE-AVLMDVTGSLRLFGGLAQLMQLLEQRLAAFFEENGL 73 Query: 134 TVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISK 193 V A+ A + + + + +K ++ LP+ + R Sbjct: 74 QAQVK------RAQGATSLIALGRLRLQDGQTQTQTDTVKKRVAELPMHTLT-AARPHLG 126 Query: 194 KLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSF 253 L+ +G + DL + + F L + RG E + Sbjct: 127 VLERIGCRNWGDLLRLPRDGVARRFGAELLEALDRARGSAPDNYEWQVLPEH-FEEKLEL 185 Query: 254 GERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLL 313 +T P++ + L + + I + ++ Sbjct: 186 NALVTHAPALMAGVERLLVHLHAWL--LGRQSGLCALKIIWHLDKRRDVAPTGELEIRTA 243 Query: 314 TPTQDSRDIINAATRSL--DAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 P QD R + L + H + A +L R + Sbjct: 244 QPAQDLRHVARLVAEHLAQQKLPAPVHSLTLQSLATELLADSAAATGSLL--MEAREQGD 301 Query: 372 QLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRS 415 ++ +++ L+A+ G + Q WQ P R Sbjct: 302 SVVELVERLSARLGDAQV--------QAWQPCADHR-PELMQRW 336 >UniRef50_C8WVC3 DNA repair nucleotidyltransferase/DNA polymerase-like protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WVC3_ALIAD Length = 402 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 54/358 (15%), Positives = 101/358 (28%), Gaps = 34/358 (9%) Query: 40 RNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYS 99 + A GV+ G P + L C V S + L +P VE + Sbjct: 31 ASRTAARAGVRPGIPVREALALVPGCHVESASGESTS----WRHLRQVLWSHTPWVETH- 85 Query: 100 IDE--AFCDLTGV-RNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK-- 154 DE + +L+G +L R+IR + + V + +A+T A++ ++ Sbjct: 86 PDERRFWIELSGPRVPLAELRQMARDIRLGLTEEQ--RVVLALAKTPWQARMLLAWSRQE 143 Query: 155 --------KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 K + V P+ W I +L ++G+ + DL Sbjct: 144 RVPGALYRKLGTEPLVVAPDLLNRDAEAFWIRAPIAASWWIPDDAKAELLSLGVFRLKDL 203 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 A+ + F R R G L P + S + Sbjct: 204 AEIPEDVLCARFGEQA-RIWRM-NGMGKTSLRPDRPPE-AWSASWRGDAEGVPLEQAKMR 260 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + L + +S + ++ PT + A Sbjct: 261 VRLCLENLCGHLARFGLAVQTLSIAL-------WAEAREIRWQKRIAKPTPRPDAL--WA 311 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTV--MDTLNA 382 + R + + Q++L + E + ++ LNA Sbjct: 312 QMAWPEEVHRAQRIWSVELCATEVAQLRPVQVSLLEQGEALDALEARDSANRLERLNA 369 >UniRef50_A9UX99 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9UX99_MONBE Length = 381 Score = 85.2 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 95/291 (32%), Gaps = 53/291 (18%) Query: 53 DPWFKQKDLFR----RCGVVCFSS---------NYELYADMSNRVMSTLEEL---SPRVE 96 + + L + V + +Y Y S +++ + S +E Sbjct: 1 MKPAEARKLLQPVAGHLLHVFAAPLCAETSGRVSYRPYRLKSRELVAVIRAQLAPSDVLE 60 Query: 97 IYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKW 156 + SIDE + L + E+R V T L V GIA K LAK+A+ AK Sbjct: 61 VASIDEVYIARPHTSPLH-LKAWADELRHLVHLHTGLHVSTGIAHNKFLAKIASSLAKPA 119 Query: 157 QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRK 216 G V ++ E + + LP + G+G + + G+ T Sbjct: 120 -----GTVVIAGPEEAHRALQTLPAKKLPGLGAKGPPL--SYGVHT-------------- 158 Query: 217 HFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAE 276 F+ L G + K+ I + D ++ + A E Sbjct: 159 SFSPWSIPQFDSLTGL---PTGKARLVKKTI-----QPIKGNDLSPIQPMLDDMAHELLE 210 Query: 277 KLRSE-HQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 ++ ++ R ++ ++ A + S S + + + +A Sbjct: 211 RIAEHPRRHPRTLTVVVRRPDGAES------SHSELFPLTSPRLQALFQSA 255 >UniRef50_A1VWD1 Putative uncharacterized protein n=5 Tax=Burkholderiales RepID=A1VWD1_POLNA Length = 443 Score = 84.8 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 37/332 (11%), Positives = 81/332 (24%), Gaps = 26/332 (7%) Query: 87 TLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLA 146 + +PRV + + E + + A T A Sbjct: 28 WALQFTPRVARL-EEAVVLEAAQSIRLFGGELPLHEQVEQGARALGV-AFTAWAPTSLAA 85 Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 A +L+ LP + + + L +G +T+ D+ Sbjct: 86 LALARAGVADGFARP----------LTQLLDPLPFAVLSAVN-VHAATLARLGCRTLADV 134 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQA 266 I + F+ L + + G + A R+ + Sbjct: 135 RRLPRGGIGRRFDAALLAALDQAYGLRPEVYDWVALP-VTFAARLELPGRVETTAGLLFG 193 Query: 267 ICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAA 326 + L + H + + G ++ PTQ + Sbjct: 194 ARRLLLQLGGWLAARHAGVTAFTFRWRHDTLRAQSAGEGCELLIRTAEPTQSVERLGRLL 253 Query: 327 TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGR 386 L + + ++ +L D A + E L ++ + A+ G+ Sbjct: 254 AEHLAHVQLLAPA-LELELLATGVSPMAENNHSLLFDAARQG--ESLGQALERVEARLGK 310 Query: 387 GTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDL 418 + + + + R L Sbjct: 311 RRVLRPRLVADHRLE---------WMQRWQSL 333 >UniRef50_C7M0M6 Putative DNA-directed DNA polymerase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M0M6_ACIFD Length = 517 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 58/374 (15%), Positives = 107/374 (28%), Gaps = 29/374 (7%) Query: 44 AKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRV-EIYSIDE 102 A+A G+ +G + VV + A RV L +SP V ++ + Sbjct: 56 ARAAGIPLGARAPMVRARLGDGRVVA--VDPIAEARWLARVHRALWSVSPGVGQVAGVRG 113 Query: 103 AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 AF T++ R + V + + A +A A GG Sbjct: 114 AFAIEARAARRFYGTEYALVERVRAALDGTVPTRVALGASIAGALIATVAGA---TTDGG 170 Query: 163 VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVL 222 ++ + +A PV+ + R ++ L +G++ V D + F Sbjct: 171 GAEVGSR----AWFAAQPVELLP---RWLAGPLRDVGVRRVGGFQRIDTAAVAARFGDRG 223 Query: 223 ERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEH 282 R R +R E L L P + + + + + L Sbjct: 224 LRWHRLVRLEADLPLVRTPPLEP-----DAVAIDVEEGEDAQSVRFRLRGALDLVLAEHA 278 Query: 283 QYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQK 342 + F E V+ + + + S A G + Sbjct: 279 DVAPA-----RWRSFVDLEGAVALERVVERPVGGTAAEILESVRALSDRAEGARGRPVR- 332 Query: 343 AGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGI-QQQWQ 401 V + L D P + + L + G + AG G + + Sbjct: 333 --VGVEILAWSVPQPPQLSLDGVPGARRQAVRQAFHVLQQRYGPEAVRVAGPGPVGRGFA 390 Query: 402 MKRAMLSPRYTTRS 415 +R +S +T Sbjct: 391 DRRPWVS--WTGVW 402 >UniRef50_C1D2K9 Putative Y-family DNA polymerase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D2K9_DEIDV Length = 423 Score = 84.8 bits (208), Expect = 6e-15, Method: Composition-based stats. Identities = 58/373 (15%), Positives = 109/373 (29%), Gaps = 42/373 (11%) Query: 16 TVFRPDLWGKPVVV----LSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFS 71 P G PV V S V+ + A+ GVK+G + Sbjct: 23 QRRHP---GVPVAVLSEEGSGGGRRVLHVSPGARDAGVKVGMRDTAALSRCPELHAETMN 79 Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 + A + + S RVE + F L+ D ++ Sbjct: 80 A-PLAAAAWNELLEQMYVRYSDRVEGRTPGLIFLKLS----LGAARDLAAALQ------- 127 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSN-LERQRKLMSALPVDDV--WGIG 188 VG+A + +A LA AK G V ++ + ++ ++ +P++ + G+ Sbjct: 128 ---APVGLAGSLEVAHLAALRAK-----AGEVREVHPGEQAEQAFLNLVPLEHLQVLGLS 179 Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFNV-VLERTVRELRGEPCLQLEEFAPTKQEI 247 +++L +G+ + DL V + + R L+G QL + Q + Sbjct: 180 PAQAERLRFLGVTGLADLCKWSAAQREAFLGVDMGTQVNRFLKGHRTEQLPRYV-PGQIL 238 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNS 307 S + + A LR + +++ T + Sbjct: 239 EASLDTDAPLLNSLEADAAFQELLPGLMTGLR--GRTAAYLTVRCDTLGG-------SLT 289 Query: 308 ASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPR 367 A+ KL P ++ A +L+ + V Sbjct: 290 ATRKLKWPLDSGG-LMRVAGLALEDTGALAIGIDRLSVQFSGLQQPSRMVGLWAGLADLD 348 Query: 368 PGSEQLMTVMDTL 380 L D L Sbjct: 349 VTRNVLDRFPDAL 361 >UniRef50_Q75EE5 AAR136Wp n=1 Tax=Eremothecium gossypii RepID=Q75EE5_ASHGO Length = 617 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 43/142 (30%), Gaps = 34/142 (23%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A DVNAF+A E V PVV + VIA + + G+ D + Sbjct: 26 VAHIDVNAFFAQVEQVRCGYGKDDPVVCVQ--WSSVIAVSYACRKYGITRLDSVAEAMKK 83 Query: 62 FR--------------------------------RCGVVCFSSNYELYADMSNRVMSTLE 89 + + Y S +++ ++ Sbjct: 84 CPTLIPIHTAVFKKGEDFWQYHDGYGPWNTDPSRQLDPAIHKVALDPYRRESRKLLKMIQ 143 Query: 90 ELSPRVEIYSIDEAFCDLTGVR 111 + P VE SIDE F DL Sbjct: 144 KRCPIVEKASIDEVFVDLGPQC 165 Score = 71.3 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 77/267 (28%), Gaps = 39/267 (14%) Query: 88 LEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK 147 L+ + +F D V C + +R V T G+++TK+++K Sbjct: 205 LQFAGDVYGADAERTSFLDWDDVIMCLG-SRLALALRQEVEDALGYTTSCGVSRTKSVSK 263 Query: 148 LANHAAKKWQRQTGGVVDLSNLERQRKLMSA--LPVDDVWGIGRRISK------------ 193 LA++ K + + + + W +G I K Sbjct: 264 LASNYRKPNAQ------TIVRNAAVETFLDQGGFELPSFWTLGGAIGKELLDLLELPPAG 317 Query: 194 ---KLDAMGIKTVLDLADTDIRFIRKH---------------FNVVLERTVRELRGEPCL 235 L A+ ++ L +R IR + + +RG C+ Sbjct: 318 SIPALRALCPESPEQLHACLLRRIRDRPLPHDAAPYLIDEQAAEALATKLFYLVRGTHCV 377 Query: 236 QLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS 295 + G + ++A A +L+ HQ I + Sbjct: 378 PVNPRPTVSSMTSRKNMRGNACKSLADCHPWLEVFSAELAGRLQDLHQEYDRIYLPRTLT 437 Query: 296 PFALNEPYYGNSASVKLLTPTQDSRDI 322 A + S S L PT + + Sbjct: 438 VAAQGRAHQRVSRSTGLHAPTGNVTAL 464 >UniRef50_B9MJ85 Putative uncharacterized protein n=2 Tax=Comamonadaceae RepID=B9MJ85_DIAST Length = 469 Score = 84.4 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 40/331 (12%), Positives = 88/331 (26%), Gaps = 19/331 (5%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFC-DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIA 140 +PRV + DEA +++G + + G Sbjct: 28 AAQGWWALRFTPRVALV--DEALLLEVSGTERLWGGRAALQSLLRD-------HAPPGPE 78 Query: 141 QTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGI 200 + + A+ + R+L LPV + + R ++ L +G Sbjct: 79 TLEGGSLWASAPTALQALALLRLQRQGRP-VPRRLPHDLPVATLSAL-RPHAQALQQLGC 136 Query: 201 KTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDY 260 +T + + + F + G+ L+ +Q Sbjct: 137 RTWGAVRALPRAGVARRFGAEPLAALDRAWGDAPHGLDWITLPEQ-FALELELPALAESA 195 Query: 261 PSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTS--PFALNEPYYGNSASVKLLTPTQD 318 P++ A LR+ HQ + + + + S +++ P Q Sbjct: 196 PALLWAGQRLLDALQGWLRARHQGVQALELAWRHDLRRIDGVDLPPWQSLTLRTAEPLQG 255 Query: 319 SRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRP---GSEQLMT 375 + L A + + + A +L E Sbjct: 256 MAHLRRLLAERL-AHQRLAAPVSRLALRSLQTAPMPQASADLLPPQPGDAGAGQGEPWHQ 314 Query: 376 VMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 ++ L+A+ G +L + + + Sbjct: 315 FVERLSARLGADSLRVPRSQADHRPECMQQW 345 >UniRef50_Q4QCF2 DNA polymerase eta, putative n=3 Tax=Leishmania RepID=Q4QCF2_LEIMA Length = 760 Score = 84.0 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 51/139 (36%), Gaps = 25/139 (17%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 A D++ FYA E V D P+V+ + G +IA N A+A GV+ + + Sbjct: 17 IAHMDMDCFYAQVEAVRLGVDCRVTPLVL--SQWGSLIAVNYPARARGVRRFSNVSEAQA 74 Query: 61 LFRRCGVVCFSS---------------------NYELYADMSNRVMSTLEELSP-RVEIY 98 L V S + E Y S ++ S L +VE Sbjct: 75 LCPGLIVALSPSYRMGEAVSQYHPHPVQDSYKLSLEPYRHASRQIFSILAATPGVQVEKG 134 Query: 99 SIDEAFCDLTGVRNCRDLT 117 S+DEA+ D+T Sbjct: 135 SVDEAYVDVTEAARRELAE 153 Score = 75.2 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 75/270 (27%), Gaps = 60/270 (22%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + +R + H GIA + LAK + K Q+ L +R Sbjct: 240 ASRVVHRLRQRIYAELHYDCSAGIAHNRVLAKCISATHKPNQQ------TLLLPDRSASA 293 Query: 176 MSALPVDDVWGIGRRISKKLDAM--GIKTVLDLADTDIRFIRKHFN-------------- 219 + LP+ + G G ++ + A+ G+ + + +RK Sbjct: 294 LFELPLSGLRGFGGKLGAAVSAVCGGVTECREAWLVPLAQLRKLDGTCDVGDGEDAEGDR 353 Query: 220 ------------------------------VVLERTVRELRGEPCLQLEEFAPTKQEIIC 249 LRG + P + II Sbjct: 354 EGRKRRPIARKRGRAASASLERDLQGLVAHTTSLYVFYRLRGLAEDTIL-NRPLSKTIIA 412 Query: 250 SRSFGERITDYPSMRQAICSYAARAAEKLRS----EHQYCRFISTFIKTSPFALNEPYYG 305 S++FG T +R+ I + + R + + F Sbjct: 413 SKNFGRITTSVEMVRRWIIVLTSELCSRYEEFTALYQIRGRSFNIKLGNDGFRSTGGLS- 471 Query: 306 NSASVKLLTPTQDSRDIINAATRSLDAIWQ 335 S +V L Q + A R + A+++ Sbjct: 472 -SHTVALPEAMQ-PDILAAVAMREVQAVFR 499 >UniRef50_C5IWL2 UV repair DNA polymerase n=21 Tax=Gammaproteobacteria RepID=C5IWL2_ECOLX Length = 102 Score = 83.3 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 49/76 (64%), Positives = 58/76 (76%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 +FAL D N FYASCE +FRPDL PVVVLSNNDGCV+AR+ EAK LG+KMG P F+ K Sbjct: 16 VFALVDCNNFYASCEKLFRPDLKDTPVVVLSNNDGCVVARSREAKLLGIKMGVPVFQIKA 75 Query: 61 LFRRCGVVCFSSNYEL 76 +R G++ FSSNY L Sbjct: 76 EMQRHGILAFSSNYAL 91 >UniRef50_A5LXS6 DNA-damage inducible protein P n=2 Tax=Streptococcus RepID=A5LXS6_STRPN Length = 145 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 49/132 (37%), Gaps = 7/132 (5%) Query: 219 NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 + R+ RG ++ ++ I +++G+ + +++ + + + A L Sbjct: 21 GRLGYDLYRKARGIHNSPVKS-NRIRKSIGKEKTYGKILRAEEDIKKELTLLSEKVALNL 79 Query: 279 RSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGH 338 + + + + I+ F+ + L TQD+ I A + + + + Sbjct: 80 HQQEKAGKIVILKIRYEDFS------TLTKRKSLAQKTQDASQISQIALQLYEELSEKER 133 Query: 339 RYQKAGVMLGDF 350 + G+ L F Sbjct: 134 GVRLLGITLTGF 145 >UniRef50_A5DV91 Putative uncharacterized protein n=1 Tax=Lodderomyces elongisporus RepID=A5DV91_LODEL Length = 731 Score = 82.9 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 24/130 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D+NAFYA E V PVV +IA + A+ G+ D K Sbjct: 46 VIALVDLNAFYAQVECVRLGLSDEDPVVC--QQWQSIIAVSYAARKYGISRLDTVHSAKL 103 Query: 61 LFRRCGV----------------------VCFSSNYELYADMSNRVMSTLEELSPRVEIY 98 V + + Y S +++ ++ V+ Sbjct: 104 KCPHLICAHAGVYKKGDSHWAYYPGSPSPVDHKVSLDTYRRESRKILRIVQSKFDLVDKA 163 Query: 99 SIDEAFCDLT 108 S+DE++ DL Sbjct: 164 SVDESYVDLG 173 Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 40/323 (12%), Positives = 93/323 (28%), Gaps = 59/323 (18%) Query: 98 YSIDEAFCDLTGVRNCRD------LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 S D D+ V D + ++R T+ + T G+A+ + +AKL+ Sbjct: 229 MSDDGQTVDMPPVIEDWDDVTLLLGSQLLLDLRRTIYEELGYTTSAGLARNRLVAKLSGD 288 Query: 152 AAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL--------DAMGIKTV 203 K + + + + + D+ G G ++ K L + I + Sbjct: 289 FKKPDNQ------TIVRNCALNRFLQNFELTDITGFGAQLGKSLIVKFQCPSNTNSIAFI 342 Query: 204 LDLADTDI--RFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYP 261 D + +R + + +RG L+L K + Sbjct: 343 RDNYTQSMMREELRDD-PELANKLYLIVRGLYPLELTSKVDVKSMMSTKNFRDNSPWCLK 401 Query: 262 SMRQAICSYAARAAEKL-------------------RSEHQYCRFISTFIKTSPFALNEP 302 + + YA + +L R + R I+ ++++ F Sbjct: 402 DAYEWLTVYAGDLSNRLLDLDNESMDLSLTKISKRDRGVLKRPRTITIGVRSTAF----- 456 Query: 303 YYGNSASVKLLTPTQDS---RDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + + + S + I+ + L + + + G Sbjct: 457 -VRQTRQMPIPIHKDISKMKQTILECGCQLLREYMEHNTDLTRL--------NNGKTPKE 507 Query: 360 LFDDNAPRPGSEQLMTVMDTLNA 382 LF + ++ + ++ Sbjct: 508 LFAGDPKNVKIMKMQNMSLAISN 530 >UniRef50_UPI0001913C3A DNA polymerase V subunit UmuC n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. AG3 RepID=UPI0001913C3A Length = 110 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 1/110 (0%) Query: 103 AFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGG 162 F D+ + +C D DFGR++R V T LT+GVG+ TKTLAK A A+K+W++ G Sbjct: 1 MFLDVRNIDSCIDFEDFGRQLREHVHSGTGLTIGVGMGPTKTLAKSAQWASKEWRQFEGV 60 Query: 163 -VVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDI 211 + N +R KL+S PVD++WG+GRRISKKL MGI T L LA + Sbjct: 61 LALTSGNPKRTEKLLSLQPVDEIWGVGRRISKKLHTMGITTALQLARANP 110 >UniRef50_Q01QX1 Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01QX1_SOLUE Length = 395 Score = 82.5 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 45/310 (14%), Positives = 87/310 (28%), Gaps = 20/310 (6%) Query: 95 VEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 +E S D D+ G+ L A + + + +A A A Sbjct: 1 MEATSADTVTFDVGGLDRLFGLPQDVAAAIARRARECGIKANLALAANADAAICAAR--- 57 Query: 155 KWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFI 214 V L + K + L + + + + L+ GI++ + I Sbjct: 58 -----GFSGVSLIPYGDEGKFLGTLSLAVLAP-SADLVETLERWGIRSFHQMGALPPLGI 111 Query: 215 RKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARA 274 + R RGE +L P + + + Sbjct: 112 AERLGAEGMRLRELARGEAERKLLPI-PEPLTFEDELELEYPVELLEPLAFLLARLINGL 170 Query: 275 AEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIW 334 A +L + + +K L+E +++L P+ D++ + L+A Sbjct: 171 ATRLATRALATDELRLRLKLENRGLHE------RTLRLPVPSLDTKAFLKLLQLDLEAH- 223 Query: 335 QAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQ 394 + + Q LF AP P +L + + A G G + Sbjct: 224 PPAAPIVHLWMGVNPVKPQSAQ-TGLFIPVAPEPV--KLELTLARIQAFVGEGRVGTPEL 280 Query: 395 GIQQQWQMKR 404 + R Sbjct: 281 LDTHRPDAFR 290 >UniRef50_Q4PF20 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4PF20_USTMA Length = 763 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 5/116 (4%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + D++AFY S P L G P+ + V + EA+A GV D Sbjct: 60 VIIALDLDAFYVSACRKRDPSLVGIPIGI--QQKALVATISYEARAAGVGKLDSIKDALK 117 Query: 61 LFRRCGVVCFSSNYELYADMSNRVMSTLEE--LSPRVEIYSIDEAFCDLTGVRNCR 114 +V + + +S++V + RVE +DE FCD+T + + Sbjct: 118 KCPDMILVNGE-DLTYFRQVSSQVWRLVRSIVWEKRVEKLGMDELFCDVTEMVDHH 172 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 26/195 (13%), Positives = 48/195 (24%), Gaps = 54/195 (27%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDL--------- 166 +R + LT GIA +K+LAKL K Q+ + Sbjct: 239 AARLAYYMRQRISDEVGLTCSAGIAPSKSLAKLVGALNKPNQQTAFCPPVVGLVSDRCKR 298 Query: 167 ------SNLERQRKLMSALPVDDVWGIGRRISKKLDAM--------------GIKTVLDL 206 + M L + + G GR + K+ +TV L Sbjct: 299 ANSIELTLERHVTAFMDPLDLRKLPGFGRVVVDKIRDHLNHDSNASAEQSNRNRQTVSSL 358 Query: 207 ------------------------ADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFA 241 + + + F V+ R + G + Sbjct: 359 VEPIGLSDDEEEKVKVKVFVGAARKMLSLEAMVELFGEVIGPRLWALVNGRDAEPVIPAP 418 Query: 242 PTKQEIICSRSFGER 256 ++ ++ Sbjct: 419 DFPLQLSIEDTYPYP 433 >UniRef50_B8C8E2 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8C8E2_THAPS Length = 1538 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 82/269 (30%), Gaps = 17/269 (6%) Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLER 171 R +R V Q+ T+ GI+ +K +AKL K + + Sbjct: 324 ALRLGCHVSANVRRVVFQKLGFTLSAGISTSKLVAKLGATYGKPNGQA------VIYPVA 377 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLAD--TDIRFIRKHFNVVLERTVREL 229 K+M + +G ++ KK+ +M I D+ D + Sbjct: 378 IPKVMDETQIRKARMLGGKLGKKVGSMNID-ADDVIRSYIDKSISFAVGDESGRWVFDAC 436 Query: 230 RGEPCLQLEEFAPT-KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFI 288 RG +++ + I +S YP + + + A+ ++++ + + Sbjct: 437 RGICLEEVKPTLNVLPKSITAFKSLRGSAGSYPELDKWVALLASDIMKRVQLDTSRNHRV 496 Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQ-----DSRDIINAATRSLDAIWQAGHRYQKA 343 + S +L PT + +++ A R L + Sbjct: 497 PKSCTLGYATKEDGNNWIGKSHRLTFPTDKDFDTRVQKLVDNARRVLLDSGHDSFS--RI 554 Query: 344 GVMLGDFFSQGVAQLNLFDDNAPRPGSEQ 372 G DF ++ + F S Sbjct: 555 GFSAIDFVTRATKGIYSFFSVGKIESSSA 583 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + L D++ FYA CE V P+V++ +A N A+ G+K GD + + Sbjct: 19 VILLLDMDCFYAQCEVVRLGLERDIPLVLVQ--WNSALAVNYPARKFGIKRGDSFQVAIE 76 Query: 61 LFRRCGVVCFSS 72 R V Sbjct: 77 KSRGKCVAIHLP 88 >UniRef50_A3WZ00 DNA polymerase IV n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZ00_9BRAD Length = 155 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 24/165 (14%), Positives = 53/165 (32%), Gaps = 12/165 (7%) Query: 240 FAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFAL 299 + + +F I D+ ++ + + + R + +L++ I+ +KT+ F Sbjct: 3 ADRGAKTVSSETTFESDIRDFATLERLLWRLSERVSSRLKASELAGSTITLKLKTADFRQ 62 Query: 300 NEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLN 359 + S + TQ + I L G ++ G+ + S A Sbjct: 63 R------TRSQSISISTQLASKIFATCREILARE-IDGTAFRLMGIGVSALRSGSQAD-- 113 Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 + + S MD L K G + + ++ Sbjct: 114 --EADMLDFRSAHAERAMDDLRKKFGSVAVIRGIAY-DGPEKPRQ 155 >UniRef50_A3EWL6 Polymerase ATREV1-444 n=1 Tax=Arabidopsis thaliana RepID=A3EWL6_ARATH Length = 444 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 3/127 (2%) Query: 138 GIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDA 197 G K++A A + ++ + + + + LPV + G+G + +KL Sbjct: 300 GKNGGKSIATAAGSSTRRHSTLEDPNFVENYF-KVEEFLDQLPVGTLPGVGSVLKEKLVK 358 Query: 198 MGIKTVLDLADTDIRFIRKHFN-VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGER 256 I+T L ++K F E RG + + I ++G R Sbjct: 359 QNIQTCGQLRLISKDSLQKDFGVKTGEMLWSYSRGLDLRSV-TAVQESKSIGAEVNWGVR 417 Query: 257 ITDYPSM 263 D + Sbjct: 418 FRDQQDV 424 >UniRef50_Q6CYA8 KLLA0A01848p n=1 Tax=Kluyveromyces lactis RepID=Q6CYA8_KLULA Length = 645 Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 43/149 (28%), Gaps = 34/149 (22%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 A DVNAF+A E V PVV + ++A + A+ V + Sbjct: 26 IAHIDVNAFFAQVEQVRCGFSRDDPVVAVQ--WTSILAVSYAARKYNVSRMESILDAIKK 83 Query: 62 F----RRCGVVCFSSN----------------------------YELYADMSNRVMSTLE 89 V E Y S +++ + Sbjct: 84 CDKIIPIHTAVFRKGEDYWQYHDGCGSWVEDESKKLSPTNYKVALEPYRRESRKLIKLFQ 143 Query: 90 ELSPRVEIYSIDEAFCDLTGVRNCRDLTD 118 + VE S+DEAF +L L D Sbjct: 144 DEYDLVEKASVDEAFIELGRKLFYELLMD 172 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 44/288 (15%), Positives = 90/288 (31%), Gaps = 55/288 (19%) Query: 123 IRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMS--ALP 180 IR + T GI+ TK L+KLA++ K + + + Sbjct: 238 IRNQIDDMLGYTTSCGISMTKNLSKLASNYKKPNAQ------TIVKNNCIDDFLDCGKFE 291 Query: 181 VDDVWGIGRRISKKL-------DAMGIKTVLDLADTDIRFIRKHF--------------- 218 ++ W +G K+L IK + D IRK Sbjct: 292 INSFWTLGGIRGKELIDLMELPKEHSIKFIRDSWPVSSDDIRKFMLKKIICRDIQRSREY 351 Query: 219 -------NVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYA 271 + + + +RG+ L +E K + + + + + Sbjct: 352 NINEADVAKISAKIYQLVRGQFRLPVEPRPLPKSMMSKKNLRNDDCASVIDCIEWLEIFC 411 Query: 272 ARAAEKLRSEHQ------YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINA 325 + ++ Q R I IK Y + + + + SR++ Sbjct: 412 SELNYRVHDLEQEYEKVIMPRTIVIMIK----GKAGMKYTQTRRITTASSSITSRELFIN 467 Query: 326 ATRSLDAIWQAG------HRYQKAGVMLGDFF--SQGVAQLNLFDDNA 365 AT+ ++ I + + ++ + L +F +G L++F + A Sbjct: 468 ATKLINEIDKQHGKLAGVYPLRELSLTLSNFDIIDKGKTVLDMFGNRA 515 >UniRef50_A8GJ69 UV protection protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GJ69_SERP5 Length = 136 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 68/162 (41%), Positives = 92/162 (56%), Gaps = 30/162 (18%) Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 M QA+C Y AAEKLR E QYCR I+ F++TSPFA N+PYY NS SV+L+ TQD D+ Sbjct: 1 MHQAVCQYVEHAAEKLRGERQYCRHITVFLRTSPFASNDPYYANSNSVQLMLATQDKCDV 60 Query: 323 INAA--TRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 + A ++ +A W+ G+RYQ+AG+ML DF + Sbjct: 61 VAVAGAVKTHEATWRDGYRYQRAGIMLNDFCDINHS------------------------ 96 Query: 381 NAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 G G ++FAGQGI + W M+R +LSP Y TR SD+ + Sbjct: 97 ----GLGNVWFAGQGINKAWAMRRELLSPSYITRLSDIPNAR 134 >UniRef50_B9WB35 DNA polymerase eta, putative n=3 Tax=Candida RepID=B9WB35_CANDC Length = 642 Score = 79.8 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 24/130 (18%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + AL D+NAF+A E + PVV VIA + + G+ D K Sbjct: 48 VIALIDLNAFFAQVEQIRLNLTDQDPVVCAQ--WNSVIAVSYACRKFGITRMDSIASCKS 105 Query: 61 LFRRCGVVC----------------------FSSNYELYADMSNRVMSTLEELSPRVEIY 98 + + + Y S +++ + + E Sbjct: 106 KCPNVIIAHAAVYKKGESHWAYIEGLPTINNHKVSLDPYRRESRKILRIISKSFDLTEKA 165 Query: 99 SIDEAFCDLT 108 S+DE + DL Sbjct: 166 SVDECYIDLG 175 Score = 69.0 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 13/170 (7%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + E+R + T G+A+TK +AKLA K + + Sbjct: 253 GSQILLEVRKDIFAELGYTTSAGLARTKQVAKLAAGFKKPDAQ------TIIRNSAINSF 306 Query: 176 MSALPVDDVWGIGRRISKKLDAM-----GIKTVLDLA-DTDIRFIRKHF-NVVLERTVRE 228 ++ + DV G+G ++ + + I ++ + + I I++ + + Sbjct: 307 LTNFELTDVTGMGGKLGESIINKINVPPQINSISFIRENFSIDSIKEKLGGELGLKVYNI 366 Query: 229 LRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKL 278 RG ++L+ K + + + +A +L Sbjct: 367 CRGTNAIELQSLIEVKSMTSTKNFTSFSVNNLFDAYDWLKVFAGDLHNRL 416 >UniRef50_Q0UKS6 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0UKS6_PHANO Length = 635 Score = 79.4 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 37/104 (35%), Gaps = 5/104 (4%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDL 61 D +AFYAS P L P+ + V+ N EA+ G+ + K L Sbjct: 17 VIHFDYDAFYASVVENEFPHLKSLPLAI--QQKQIVVTCNYEARRRGLYKLQLISEAKRL 74 Query: 62 FRRCGVVCFSSNYELYADMSNRVMSTLE--ELSPRVEIYSIDEA 103 +V + + + S + + + + R E DE Sbjct: 75 CPDVVIVLGE-DLTRFRNASKELYALVRSFSWNARCERLGFDEV 117 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 66/222 (29%), Gaps = 46/222 (20%) Query: 94 RVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAA 153 RVE +DE L G + T + Q T VGI+ K LAKL + Sbjct: 185 RVETAGLDENETTLLGNASSGCFTKTLMLL----EQEKGYTATVGISTNKLLAKLVGNRH 240 Query: 154 KKWQRQTGGVVDLSNL---------ERQRKLMSALPVDDVWGIGRRISKKLDAM------ 198 K + L + M + + GIG +I++KL Sbjct: 241 KPNAQT-----TLLPPYTSDHTDISDNVTLFMDDHEIGKIPGIGFKIAQKLRTHVLQRPA 295 Query: 199 GIKT------------VLDLADTD---IRFIRKHFNVV------LERTVRELRGEPCLQL 237 I T V D+ + + + R L G ++ Sbjct: 296 AIDTGLVYGGTKESVLVRDVREYPGLGPELLERLLGGNGAPHGIGARIWELLNGCDSAEV 355 Query: 238 EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 + +I S+ R+ + + + AA ++ Sbjct: 356 GQARQVPTQISIEDSY-IRLDTINEVTKELSMLAASLLTRMH 396 >UniRef50_Q4QCF3 DNA polymerase eta, putative n=3 Tax=Leishmania RepID=Q4QCF3_LEIMA Length = 786 Score = 78.3 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 77/276 (27%), Gaps = 62/276 (22%) Query: 116 LTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 + +R + H GIA + LAK + K Q+ L +R Sbjct: 260 ASRVVHRLRQRIYAELHYDCSAGIAHNRVLAKCISATHKPNQQ------TLLLPDRSASA 313 Query: 176 MSALPVDDVWGIGRRISKKLDAM--GIKTVLDLADTDIRFIRKHFNV------------- 220 + LP+ + G G ++ + A+ G+ + + +RK Sbjct: 314 LFELPLSGLRGFGGKLGAAVSAVCGGVTECREAWLVPLAQLRKLDGTCDAGDGEDAEGDR 373 Query: 221 --------------------------------VLERTVRELRGEPCLQLEEFAPTKQEII 248 LRG + + A + + Sbjct: 374 EGHVDEASAACRGDTKVDNGGGGEDGMVAQSRTGVYAFYRLRGLGSDTVADPALPR-GMK 432 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRS----EHQYCRFISTFIKTSPFALNEPYY 304 S+ F + + + + + A +L H+ R + ++ Sbjct: 433 ASKIFHPACSSWSAAQLWMAPLAGELWHRLSEYESCYHKEGRSLVLVLRAYVTPEQARRG 492 Query: 305 GNSAS----VKLLTPTQDSRDIINAATRSLDAIWQA 336 ++ S V L T +D+ +I R + + Sbjct: 493 QHTRSYRAQVPLPTNVRDASEIAGMGLREFVKLMRE 528 Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 43/140 (30%), Gaps = 26/140 (18%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGV-KMGDPWFKQK 59 A D++ FYA E V D P ++ G IA N A+A GV + + + Sbjct: 36 IAHMDMDCFYAQVEAVRLGVDCRVTPFALVQ--WGSFIAVNYPARARGVRRFCLSPDEVR 93 Query: 60 DLFRRC---------------------GVVCFSSNYELYADMSNRVMSTLEELSPRVE-I 97 + + E Y S ++ + L V Sbjct: 94 RELPDVRMSHIATYAMGESEYCYPEAPHINTHKVSLEPYRHASRQIFAILRAEPGVVVGK 153 Query: 98 YSIDEAFCDLTGVRNCRDLT 117 IDEA+ D+T Sbjct: 154 AGIDEAYVDVTEAARRELAE 173 >UniRef50_Q2W1Y7 Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W1Y7_MAGSA Length = 78 Score = 78.3 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Query: 347 LGDFFSQGVAQLNLFDD-NAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 + D +LF + LM +D LN+K G+G + + WQM+ Sbjct: 1 MLDLVRPEDIPRDLFSPTPETGEKPKALMAAVDGLNSKLGKGAVGYGLAPKGAPWQMRCD 60 Query: 406 MLSPRYTTRSSDLLRVK 422 +P YTT +L VK Sbjct: 61 NRTPSYTTSWEELPVVK 77 >UniRef50_C1AAH6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AAH6_GEMAT Length = 596 Score = 78.3 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 44/330 (13%), Positives = 90/330 (27%), Gaps = 57/330 (17%) Query: 44 AKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYS--ID 101 A LG++ G + + V + + D +TL SP+V Sbjct: 3 AGRLGIRAGMRISEARAHCATLDVRL--WDNQAITDAVLAGTATLLTASPQVTPVIGTPG 60 Query: 102 EAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAK-------------- 147 + TG D + + Q+ H V IA + A+ Sbjct: 61 MWWIGATGFDAL-GGEDLFAHLLLQIAQQWHPQARVAIADSCVAARAATWAPIVRSTTPT 119 Query: 148 -LANHAAKKWQRQTGG-----------------------------------VVDLSNLER 171 A + + QR+T G + R Sbjct: 120 SSAQPSHTRQQRRTPGWETTPATLRSATQLMIGATSTDDMTRMSITSDASPYITCIPSGR 179 Query: 172 QRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 ++ P+ V + + L A+G++TV LA + + + + R +G Sbjct: 180 CAHYLAPAPLGLVPM-ASELREALQALGLRTVGALAALEASDVEERWGHEGLGAWRLAQG 238 Query: 232 EPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTF 291 + + + + + + + R + + + +S Sbjct: 239 DDPRRPGLT-RVDMSRSATVELPNAVHSAEPVLFVVRAQLQRLVQDCVRDGRAAAAVSIT 297 Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRD 321 + S +TPT+ R+ Sbjct: 298 LVLDAGRQYPIEDIGSEWADDMTPTRSVRE 327 >UniRef50_B9L412 Putative uncharacterized protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L412_THERP Length = 324 Score = 77.9 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 36/220 (16%), Positives = 75/220 (34%), Gaps = 19/220 (8%) Query: 189 RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEII 248 R+ +L A+GI T+ AD ++ +R+ F + R G+ + P + Sbjct: 23 SRVQDRLRALGIVTIGQFADLPLQSLRRRFGADIVLAHRLAHGDDPTPFRGWTPLVP-LR 81 Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 R+ I + ++ + S A+ L + R I + + E + Sbjct: 82 AERALEPPIATHDALEPVLRSLCREIADGLAALAHAARSIQLEL------VEEADRTVAR 135 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDD-NAPR 367 +L P + + ++ A L + H + + + +Q LFD+ A Sbjct: 136 FRRLPQPLRTTPELFAVAWSLLAGMTV-VHPIVLLRLTVEEHAPVHASQPALFDETPART 194 Query: 368 PGSEQLMTVMDTLNAKEGRGTLYF------AGQGIQQQWQ 401 E+L + RG + + +W+ Sbjct: 195 AERERLWQA----AQRFARGRVVRILEHVPVAPLPELRWR 230 >UniRef50_D2LKG4 DNA-directed DNA polymerase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LKG4_RHOVA Length = 109 Score = 77.5 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 45/103 (43%), Positives = 59/103 (57%), Gaps = 1/103 (0%) Query: 136 GVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKL 195 +GI TK LA +AN AKK GV +L ++ +++ + V D+WG+GR+ S L Sbjct: 5 TIGIGCTKALATIANRMAKKDPEAK-GVFNLFDVADIDAVLAKIEVGDIWGVGRQWSAWL 63 Query: 196 DAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLE 238 + GIKT LDL TD R +R VV ER REL G CL LE Sbjct: 64 EEQGIKTALDLKRTDPRHVRTKMTVVGERIARELNGVSCLPLE 106 >UniRef50_B3L3B7 Putative uncharacterized protein n=1 Tax=Plasmodium knowlesi strain H RepID=B3L3B7_PLAKH Length = 1500 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 15/173 (8%) Query: 1 MFALCDVNAFYA------SCETVFRPDLWGKP--VVVLSNND-----GCVIARNAEAKAL 47 ++ D + ++ +CE G + V + V A N K Sbjct: 597 VYLYIDFDNYFLNASVKSACEQCDNNKKIGSNEILCVCHSLKKEDSYSIVSATNYWGKKN 656 Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 + G ++ ++ + + ++ S + L S V + S+DE+ L Sbjct: 657 KIHKGMVKWEVTNMHKD-NIRFVKYDFGNILRCSYLFLLVLINYSKNVRVLSVDESIVQL 715 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 N DL ++I + T+L+V +GI+ ++++ A KK Sbjct: 716 -FYENEEDLFLTAKQIAEDIYNLTNLSVSIGISSNLSMSRKALKFCKKRFLFF 767 >UniRef50_Q3BNM7 ImpB/MucB/SamB family protein (N-terminal) n=8 Tax=Bacteria RepID=Q3BNM7_XANC5 Length = 98 Score = 77.1 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 48/84 (57%), Positives = 60/84 (71%), Gaps = 1/84 (1%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 MFAL D + FYASCE VF+PDL +P+VVLSNNDGC IAR+ EAKALGV MG P K Sbjct: 1 MFALIDGSNFYASCELVFQPDLRDRPLVVLSNNDGCAIARSDEAKALGVTMGQPIHKVPS 60 Query: 61 LFRRCGVVCFSSNYELYADMSNRV 84 RR + S+N+ LY D+++R+ Sbjct: 61 QIRR-RLTLRSANFGLYGDIASRI 83 >UniRef50_C6MGZ1 DNA-directed DNA polymerase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MGZ1_9PROT Length = 76 Score = 76.7 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%) Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 ML + Q +LF + QLM +D +N + G+GT+ A QGIQQ+W M+R Sbjct: 1 MLSGLVDEQTRQADLFGLSPISNK-TQLMETIDNINDRMGKGTIRLASQGIQQRWLMRRE 59 Query: 406 MLSPRYTTRSSDLLRV 421 S +TT +LL V Sbjct: 60 KKSQNFTTEWEELLTV 75 >UniRef50_B7AU37 Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AU37_9BACE Length = 105 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 10/94 (10%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNN---DGCVIARNAEAKALGVKMGDPWFKQ 58 D N FYAS E + P+L GKPV V + G V+ + AK GVK G ++ Sbjct: 5 ILHSDCNCFYASVELLHHPELRGKPVAVGGDPEARHGIVLTADYTAKRYGVKTGMALWQA 64 Query: 59 KDLFRRCGVVCFSSNYELYADMSNRVMSTLEELS 92 K+ + + L ++ Sbjct: 65 KE--PYQSIY-----RSYIREAHRYHYQKLYKIH 91 >UniRef50_C2FQ53 UvrA family protein n=1 Tax=Lactobacillus plantarum subsp. plantarum ATCC 14917 RepID=C2FQ53_LACPL Length = 184 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 1/138 (0%) Query: 159 QTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHF 218 T G+ ++ K+ + D+WGIG R++K L+ + I + +L T+ F++++ Sbjct: 25 TTVGIGEIHYETVPDKIWPITELTDIWGIGPRMAKHLNRLQIHNMYELVHTNPHFLKQNL 84 Query: 219 NVVLERTVRELRGEPCLQL-EEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEK 277 V+ + G QL E + + S+ + I + A + Sbjct: 85 GVISSQIFATSWGVDHSQLTEPIKTKEASLGNSQVLPRDYLAQGELETVIKEIDEQVAAR 144 Query: 278 LRSEHQYCRFISTFIKTS 295 LR H+ +S I S Sbjct: 145 LRHHHKLAGCLSLSIGFS 162 >UniRef50_A1WWK8 Putative uncharacterized protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WWK8_HALHL Length = 175 Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 44/91 (48%), Positives = 61/91 (67%) Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 VWG+G+R++ +L +GI+T DLA R IR+HF V L RT ELRG C LE Sbjct: 26 VWGVGQRLADRLAELGIQTTEDLARLPPRRIRQHFPVTLARTAEELRGCACHDLESEPAP 85 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARA 274 +Q+I+CSR+FG + D P++R+A+ YAARA Sbjct: 86 RQQIVCSRTFGTPVRDKPALREAVADYAARA 116 >UniRef50_A5K6H4 Putative uncharacterized protein n=1 Tax=Plasmodium vivax RepID=A5K6H4_PLAVI Length = 1619 Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 61/173 (35%), Gaps = 15/173 (8%) Query: 1 MFALCDVNAFY--ASCETVFRPDLWGKP------VVVLSNND-----GCVIARNAEAKAL 47 ++ D + ++ AS + P K + V + G + A N K Sbjct: 630 VYLYIDFDNYFLNASVKGASEPYGKSKKIDNHEILCVCHSLKKEESYGIISATNYWGKKN 689 Query: 48 GVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 + G + + R + ++ S + L S V + S+DE+ L Sbjct: 690 KILKGMVKGEVTKMHRD-NIRFVKYDFSNILRCSYLFLLVLINYSKNVRVLSVDESILQL 748 Query: 108 TGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 ++ ++I + T+L+V +GI+ ++++ A KK Sbjct: 749 -FYETEEEIFSAAKQIAEDIYTLTNLSVSIGISSNLSMSRKALKFCKKRFLFF 800 >UniRef50_B5JUJ6 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUJ6_9GAMM Length = 312 Score = 75.9 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 26/203 (12%), Positives = 62/203 (30%), Gaps = 10/203 (4%) Query: 94 RVEIYSIDEAFCDLTGVRNCR-DLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA 152 EI E DL+ + ++ + + G+A A A Sbjct: 51 NYEILGNGEVLFDLSRQQREFCSPVQMAEQLTMQLQGYLGGELSTGLAADALTAIYAAR- 109 Query: 153 AKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIR 212 Q+ + L ++++S P++ + + +S L +G ++V L + Sbjct: 110 ------QSSSGLSLVPAWDAQRVLSGAPIECLDSVLSGVSTLLKGLGYQSVGQLGQQRDQ 163 Query: 213 FIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAA 272 + + + RG+ Q + + R D I + Sbjct: 164 VLTYRYGELGRAIQLLARGQSVPQQYWYKSPPLSVSVKGRLSRR--DGEQASHRINALKE 221 Query: 273 RAAEKLRSEHQYCRFISTFIKTS 295 + +++ + + F + S Sbjct: 222 KVSQRYARLGFSAKRWTLFFRRS 244 >UniRef50_C1MYC1 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MYC1_9CHLO Length = 681 Score = 75.6 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 27/72 (37%), Gaps = 3/72 (4%) Query: 1 MFALCDVNAFYASCETVFRP-DLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQK 59 + D++ FYA E D P+ V +IA N A+A GVK + K Sbjct: 30 VVIHLDLDCFYAQVEARRLGVDGTSIPMAV--QQWSGLIAVNYPARACGVKRHHTVAEAK 87 Query: 60 DLFRRCGVVCFS 71 L +V Sbjct: 88 KLCPEIVLVHVE 99 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 43/253 (16%), Positives = 73/253 (28%), Gaps = 29/253 (11%) Query: 68 VCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCR---DLTDFGREIR 124 + Y S +M L PRVE SIDEA+ D+T + I Sbjct: 158 QNRKVSLRRYRAASASIMRVLASACPRVEKASIDEAYLDVTAEVDEITRVGGDALTSAIE 217 Query: 125 ATVLQRTHLTVGVGIAQ--TKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVD 182 V + + +A + LA A+ V KL + Sbjct: 218 RGVAESGVVEPPDVLASDVDRRLAVGAS------------VCADVRRAVFEKLGYTVSGG 265 Query: 183 DVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE-FA 241 G + L + T L + R RGE + Sbjct: 266 VAHNKGGFTAATLSKL---THEALTSAGFE------PKTVAWLTRVSRGEDAEPVTPNAC 316 Query: 242 PTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALN- 300 + I +SF + +TD + + + ++ +L + R +K A + Sbjct: 317 DGVKSINAFKSF-QPLTDRRRVHSWLSALSSELTARLIEDRATQRRTPRSLKLEYRANHF 375 Query: 301 EPYYGNSASVKLL 313 S S++ Sbjct: 376 RESDMQSKSLRFP 388 >UniRef50_Q5CPV1 DinB/family X-type DNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II RepID=Q5CPV1_CRYPV Length = 358 Score = 74.8 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 27/137 (19%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKD 60 + +L D++AF+A V KP+ V++N V+A N ++ GV + Sbjct: 36 IISLIDMDAFFAQVCHVEYNIPRDKPLAVINN--NVVLAVNYPSREKGVNRKMSKEEILS 93 Query: 61 LFRRCGV---VCFSSN--------------------YELYADMSNRVMSTLEELSPRV-- 95 + + V + +++ S V + L+ P Sbjct: 94 ICPEIIIPQNVFLDARGQYLELFNDDNLNMTYQKLSLDIFRKASKMVFTKLKSYLPTCNA 153 Query: 96 EIYSIDEAFCDLTGVRN 112 +I SIDE + DLT + Sbjct: 154 QIASIDEIYFDLTNIIQ 170 Score = 48.2 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 14/98 (14%), Positives = 32/98 (32%), Gaps = 8/98 (8%) Query: 113 CRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQ 172 + R + + T T GI K +K+ + K + + Sbjct: 267 LIFGSILIYRARKRLQEETTYTCSSGIFINKIYSKMISSLKKPNGQ------TVLLHRWF 320 Query: 173 RKLMSALPVDDVWGIGRRISKKLDAM--GIKTVLDLAD 208 + + + +G ++ K L I+++ DL + Sbjct: 321 ESYIKDTHILKLRFLGGKLGKCLIEKFPEIQSIKDLQN 358 >UniRef50_B5J847 Putative uncharacterized protein n=2 Tax=Octadecabacter antarcticus 307 RepID=B5J847_9RHOB Length = 150 Score = 74.4 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 6/128 (4%) Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 QA+ ++A RAAEKLR ++ F T+ L+ P Y S S ++ T + D+ D++ Sbjct: 18 QAVTAHATRAAEKLRQHGLVAGTLTVFFHTNRHRLDRPQYSGSRSTRITTMSSDTFDLVE 77 Query: 325 AATRSLDAIWQAG----HRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTL 380 AA R A W G + + KAG+ML D L LFD +P S LM+ +D + Sbjct: 78 AARRGAQAAWPKGQGQTYGFTKAGIMLADLIRFEDRPLTLFD--VEKPKSAALMSALDRV 135 Query: 381 NAKEGRGT 388 N + G+ Sbjct: 136 NKRFGKKR 143 >UniRef50_Q6MQS5 Putative uncharacterized protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQS5_BDEBA Length = 420 Score = 74.0 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 33/317 (10%), Positives = 93/317 (29%), Gaps = 22/317 (6%) Query: 93 PRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA 152 PRV+ F D+ ++ E + + IA T A++ Sbjct: 5 PRVQYRFPHYIFVDIGSTQHLMGGEIGCLEKALQIAAKFAPDASAAIADTPAGAQMLAKW 64 Query: 153 AKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKK--------LDAMGIKTVL 204 + G + K + + D+ G+ KK +G+ + Sbjct: 65 -RPSHISLRG-----KEQESFKGLGLDALKDLEGLSPWAQKKPVEHMIAFFHTLGVYGLE 118 Query: 205 DLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMR 264 + + + +R+ + L + + P + + + P + Sbjct: 119 GVLNFRLNSLRERWGDFGVLLWNRLHSQDSQVISPLVPRDPLVGYGY-LDDPLGSAPLLM 177 Query: 265 QAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIIN 324 + + +L+ ++ + + + + S++ ++PT+D + Sbjct: 178 NRLKVHLDILFARLQGLARHAQRLDVVLH-----CEYSDKRYNLSIEPVSPTRDQELFED 232 Query: 325 AATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKE 384 + L+ ++ + L D + + +L++ + Sbjct: 233 LLFKKLEQQVLEN-PIREFEITLFDVPEKIQQLDFFEPRDNTEDRWRRLISFAKQSQCEM 291 Query: 385 GRGTLYFAGQGIQQQWQ 401 G + A +Q ++ Sbjct: 292 GFLQME-ASHFPEQSFR 307 >UniRef50_A7F9S4 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7F9S4_SCLS1 Length = 594 Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 32/341 (9%), Positives = 84/341 (24%), Gaps = 73/341 (21%) Query: 106 DLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVD 165 D + + + +R ++ + T VGI+ K L+KL + K + T Sbjct: 170 DAELLTRLILGSHLAQYLRLSLEEEKGYTSTVGISTNKLLSKLVGNLHKPKGQTTLLPPY 229 Query: 166 LSNLER------QRKLMSALPVDDVWGIGRRISKKLDAM--------------------- 198 + + + + GIG ++S+++ Sbjct: 230 EVLPNDDGLQSNATTFIDSHDIGKIPGIGFKMSQRIRNHVLSRPADFESGLIYGGTKESV 289 Query: 199 GIKTVLDLADTDIRFIRKHFNVVLERT------VRELRGEPCLQLEEFAPTKQEIICSRS 252 ++ V A + K + G +++ +I S Sbjct: 290 AVRDVRLFAGMGPDTLEKILGGSGAERGIGGKAWGLINGGDDTDVKDARKVPSQISIEDS 349 Query: 253 FGERITDYPSMRQAICSYAARAAEKL--------RSEHQYCRFISTFIKT---------- 294 + + + + P + + + ++ H + + KT Sbjct: 350 YIK-LDNMPRLMEELRMLTTSLLNRMYQDLLEDDEESHVPSKRWIAYPKTIRLSTRPRLP 408 Query: 295 --SPFALNEPYYGNSASVKLLTPTQDSRD---------IINAATRSLDAIWQAGHR--YQ 341 + + S S L + +D I + + Sbjct: 409 LNADGTRTRSFNRISRSGPLPNLVFNLKDGIDSIVERLIRDTLIPMFRKLHPQRSDWNLS 468 Query: 342 KAGVMLGDFFSQGVAQLN--------LFDDNAPRPGSEQLM 374 + + + + +F ++ Sbjct: 469 LVNIGVTNMVEAASEDGSGGGRNIGLMFKRQEATLKEWKVE 509 Score = 53.6 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEE--LSP 93 ++ N EA+ G+ + K + +V + D S + LE+ S Sbjct: 31 IIVTCNYEARLRGLSKLQLISEAKKICPDVVIVLGE-ELGRFRDASKMLYKHLEKFSWSG 89 Query: 94 RVEIYSIDEAFCDLTGVRNC 113 +VE DE F D+T + + Sbjct: 90 KVERLGFDEVFMDVTDIVDY 109 >UniRef50_C9Y1T2 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y1T2_CROTZ Length = 91 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 62/93 (66%), Positives = 74/93 (79%), Gaps = 4/93 (4%) Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 +DA+W+ GHRYQ AGVM+GD F QGVA+ FD+NAPR SE LM++MD LN + GRGTL Sbjct: 1 MDAVWRDGHRYQMAGVMMGDLFRQGVAR---FDENAPRVNSEALMSLMDKLNQQ-GRGTL 56 Query: 390 YFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 YFAGQGIQQ WQMKR MLSP YTTR +D+ V+ Sbjct: 57 YFAGQGIQQAWQMKREMLSPCYTTRLADVPTVR 89 >UniRef50_A1VWD4 DNA-directed DNA polymerase n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VWD4_POLNA Length = 180 Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 55/199 (27%), Positives = 82/199 (41%), Gaps = 46/199 (23%) Query: 249 CSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSA 308 SRSFG +T + ++ + +R A++L +H + I+ S Sbjct: 2 VSRSFGRWVTQAVDLATSVAEFTSRVADELCCQHSAAGALMVLIRPS------------- 48 Query: 309 SVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLF------- 361 D+ ++ AA L I+Q G Y KAGVML + Q + Q L Sbjct: 49 --------SDTAVVVKAALVGLRLIYQFGFLYAKAGVMLVELRPQALRQDELDISAGFMP 100 Query: 362 ---------------DDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ---QQWQMK 403 + P +LM +D LN + GRGTL FA G++ Q W MK Sbjct: 101 ISQMAGAGRLEEELVAQSPPLRDRAKLMAKLDALNGRYGRGTLRFAAAGLENDQQAWAMK 160 Query: 404 RAMLSPRYTTRSSDLLRVK 422 + SP YTT +D+L V+ Sbjct: 161 QVRRSPGYTTCWADMLIVR 179 >UniRef50_C5T314 UMUC-like DNA-repair protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T314_ACIDE Length = 72 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%) Query: 360 LFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG---IQQQWQMKRAMLSPRYTTRSS 416 L ++ +LM +D LN + G+GT++ G + W MK+ +P+YTTR Sbjct: 6 LDLEDEDHRDRTRLMVALDALNQRYGKGTVHSGATGGTNRGKDWGMKQERRTPQYTTRWE 65 Query: 417 DLLRVK 422 D+ + Sbjct: 66 DVPVAR 71 >UniRef50_Q2Y7D7 DNA polymerase V n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y7D7_NITMU Length = 79 Score = 71.7 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 36/76 (47%) Query: 346 MLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRA 405 ML + Q +L ++ S++LM MD LN + GR T+ + W M R Sbjct: 1 MLMGINDAQIIQESLLHEHGAGERSQRLMKAMDALNLRYGRNTVSVFTPASPKSWAMGRE 60 Query: 406 MLSPRYTTRSSDLLRV 421 +SP YTTR SD+ Sbjct: 61 AMSPCYTTRWSDVPVA 76 >UniRef50_A8UAE9 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UAE9_9LACT Length = 149 Score = 71.3 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 53/132 (40%), Gaps = 3/132 (2%) Query: 147 KLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDL 206 KLA A K + G+ + + + P++++WGIG+R + + +GI +V L Sbjct: 3 KLALDNAAK--KTPNGIAECHYEMVSETIWNIHPINEMWGIGQRTAANIYRLGIDSVYSL 60 Query: 207 ADTDIRFIRKHFNVVLERTVRELRGEPCLQL-EEFAPTKQEIICSRSFGERITDYPSMRQ 265 + + +++ ++ E+ G + + + P S+ D + Sbjct: 61 STNSAQSLKRTHRIIGEQLFYYAHGIDQSIIAQNYIPLSNSFSKSQILDRDYIDQYEIEV 120 Query: 266 AICSYAARAAEK 277 I A + A K Sbjct: 121 VIREMADQVAIK 132 >UniRef50_C2QVF5 DNA-damage repair protein n=1 Tax=Bacillus cereus ATCC 4342 RepID=C2QVF5_BACCE Length = 198 Score = 71.3 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 56/140 (40%), Gaps = 10/140 (7%) Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEA--FCDLTGVRNCRDLT---DFGREIRAT 126 Y SN + + P +E + + F + + + F + + Sbjct: 3 PIMGTYIKCSNYITKLALQYVP-IEDFINTASMNFLWILPIASIYLPEIQMKFALQFKRE 61 Query: 127 VLQRTHLTVGVGIAQTKTLAKLANHA-AKKWQRQTGGVVDLSNLERQRKLMSALPVDDVW 185 + + T + +GIA ++K+A AKK + GV + + KL S P+ W Sbjct: 62 IYEHTRIECTIGIAPNLLMSKVALDIEAKKNK---DGVAYWTYEDIPTKLWSIRPLSKFW 118 Query: 186 GIGRRISKKLDAMGIKTVLD 205 GI +I KL+ G+ ++ + Sbjct: 119 GISHKIETKLNQKGVHSIGE 138 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 24/55 (43%) Query: 353 QGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAML 407 +G Q++LFD+ R +LM VMD + K G+ ++ R L Sbjct: 138 EGEEQISLFDNIIQREKEIKLMKVMDEIRTKFGKNSILRGISYTNNATARYRNTL 192 >UniRef50_A7VEX4 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VEX4_9CLOT Length = 127 Score = 70.9 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 1/95 (1%) Query: 304 YGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM-LGDFFSQGVAQLNLFD 362 Y + +K+ T + +I A R + + GV + Q++LFD Sbjct: 12 YSFTRQMKIDHATNITSEITEYAYRLFKENYNWSKTIRSIGVRGADLVTDKYWEQIDLFD 71 Query: 363 DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 D + R + +D + + G ++ + Sbjct: 72 DISRREKMMKADAAVDDIRRRFGYYSVQRGLMYMD 106 >UniRef50_Q55931 UmuC protein n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55931_SYNY3 Length = 116 Score = 69.8 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 41/78 (52%), Positives = 53/78 (67%) Query: 32 NNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEEL 91 + + A KALGVKMG P+FK DL +R + FSSNY LY D+S+R+M++L+ Sbjct: 20 GSHAGIPAVRLRVKALGVKMGVPFFKIPDLVKRHNIQVFSSNYCLYGDLSHRIMTSLQLF 79 Query: 92 SPRVEIYSIDEAFCDLTG 109 SP VEIYSIDEAF +LT Sbjct: 80 SPVVEIYSIDEAFLELTP 97 >UniRef50_Q8I347 Putative uncharacterized protein n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8I347_PLAF7 Length = 1697 Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 58/172 (33%), Gaps = 15/172 (8%) Query: 1 MFALCDVNAFYASCETV-------FRPDLWGKPVVVLSNND-----GCVIARNAEAKALG 48 ++ D + ++ + + + + V + G + + N K Sbjct: 666 VYLYIDFDNYFLNASIRNKICMYEKKKSMNNEIFCVCHSLKKEDSYGIISSTNYWGKKNK 725 Query: 49 VKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLT 108 + G + + + ++ S + L S V + S+DE+ L Sbjct: 726 ILKGMVKGEATKM--NKNINFVKYDFSNILKCSYLFLLVLINYSKNVRVLSVDESILQL- 782 Query: 109 GVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT 160 D+ ++I + + T+L+V +GI+ + ++ A KK Sbjct: 783 FYEKEEDIFIISKKISDDIYRLTNLSVSIGISHDLSTSRKALKFCKKRFMFF 834 >UniRef50_C1RL95 Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RL95_9CELL Length = 445 Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 20/179 (11%), Positives = 41/179 (22%), Gaps = 21/179 (11%) Query: 137 VGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIG-------- 188 +G A A LA + ++ V ++ Sbjct: 1 MGTADGLLAAVLAARTGA-----------VVEPGLSPVFLAPHGVTELVHATTTPEQAAE 49 Query: 189 -RRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEI 247 R+ L +G++T+ A + F + RG P + Sbjct: 50 VMRLVDLLHRLGLRTLGAFAALPAPDVHARFGRLGSWARTLARGLDERPPARRRPEAD-L 108 Query: 248 ICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGN 306 + + A A +L + C + +T + Sbjct: 109 EVDVELDPPVDRVDTATFAGRRLAEELHAELVARSVTCGRLQITARTDDGTELVRTWRT 167 >UniRef50_Q4D5H7 Putative uncharacterized protein n=2 Tax=Trypanosoma cruzi RepID=Q4D5H7_TRYCR Length = 547 Score = 68.2 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 93/294 (31%), Gaps = 34/294 (11%) Query: 69 CFSSNYELYADMSNRVMSTL--EELSPR---VEIYSIDEAFCDLTGVRNCRDLTDFGREI 123 +++ D + + ++ P VE+ I E L D + Sbjct: 186 ITPEDFQRVKDKLRMLTRFIIVDKRWPLEVSVEVTPIIE-----RAPSENNSLVDVANML 240 Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAK------KWQRQTGGVV-----DLSNLERQ 172 T+ + GI+ T LAK+A A++ +GG++ DL E Sbjct: 241 SRTLADELRIGAWCGISSTPVLAKMACEASRNQPPLRPAALASGGILSLKHYDLPTHESL 300 Query: 173 RKLMSALPVDDVWGIGRRISKKLDA-MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG 231 ++ ++ +P+ D+ +G+ + L + GIK D++ + R ++ + G Sbjct: 301 KEFLADVPLSDIPVLGKAQVELLKSVYGIKKCGDISAQEDRMGFSLAPATMDFFLSIAYG 360 Query: 232 EPCLQLEEFAPTKQ--------EIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQ 283 L+ E +Q +I S RI + + + L Sbjct: 361 AIRLENEIGITLRQKGTRCKAAQIRRE-SQYGRIVSEEQFINTVLTIFDSVHKDLLLHDF 419 Query: 284 YCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG 337 +S + + ++ ++ T + + R Sbjct: 420 VTGRVSIDTRR---TVPRVFWVTEEYEEITPRTNNREILRETTLRLAKRFAPRR 470 >UniRef50_Q384F9 Putative uncharacterized protein n=3 Tax=Trypanosoma brucei RepID=Q384F9_9TRYP Length = 581 Score = 67.9 bits (164), Expect = 7e-10, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 81/297 (27%), Gaps = 28/297 (9%) Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQ 141 + E++P +E + G D + + + G++ Sbjct: 213 RWPLELSLEITPIIEHQRKQ--MLECQGECRVSTAEDVMELLSSVFSAELRVGAWCGLSC 270 Query: 142 TKTLAKLANH-AAKKW----------QRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRR 190 T LAK+A +K D+ + + ++ + L + D+ +G+ Sbjct: 271 TPVLAKMACDECHRKHKLCRQDYSRGGVVGTVRYDIRSHKEAKEFVQNLSLGDIPVVGKP 330 Query: 191 ISKKLDA-MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRG------EPCLQLEEFAPT 243 ++ L+ GI +AD ++R +E + G E L P Sbjct: 331 QARLLEDVYGITKCGGIADQEVRLGFSLSQSTMEFFLSVAYGTVRLPSEATTTLLRKPPR 390 Query: 244 KQEIICSR-SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEP 302 + R S R+ + S L + + L Sbjct: 391 CKAAHIRRESQFGRVVSDEQFINTVMSVFDNVYTDLVEHDFVTGRVMIETRR---TLPRT 447 Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAG----HRYQKAGVMLGDFFSQGV 355 ++ S + T D + R GV GD S Sbjct: 448 HWVVEESEDIAPRTNDRDLLREVTIRLARRFAPRRTEELRDIYSVGVHFGDVRSWSE 504 >UniRef50_Q4UFQ5 Putative uncharacterized protein n=2 Tax=Theileria RepID=Q4UFQ5_THEAN Length = 667 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 34/266 (12%), Positives = 86/266 (32%), Gaps = 42/266 (15%) Query: 26 PVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVM 85 P V N G +++ N E G+K G D+ + +V + + + R++ Sbjct: 111 PAAVY--NHGRILSVNNECLNRGIKKGMYVETSLDICKDMKLVKYDWDKVNERGL--RII 166 Query: 86 STLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFG-------REIRATVLQRTHLTVGVG 138 L++ + R+ +E + ++ L + + + +G Sbjct: 167 RLLKKYTDRILSPQYNEFYLQISYTECRNLLETVCSNTDENICNLAIQISREVPGDPVIG 226 Query: 139 IAQTKTLAKLANHAA---KKWQRQTGGVVDLSN--------------------LERQRKL 175 I + ++KLA+ K +++ DLS + + Sbjct: 227 IGKNMLVSKLASKRCRNLKINSQESEYDYDLSPVLCITSIYGGCYMVSDKICIVTDGFRF 286 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRK--HFNVVLERTVRELRGEP 233 ++ + + ++ G+G +S+ L + G+ T D+ + + + G Sbjct: 287 LNNVYLSEIPGVGY-LSQVLKSKGLVTCNDVRKIGTPLCLQSVLGGRIGKLVYNFCFGYD 345 Query: 234 CLQLEEFAPTK-----QEIICSRSFG 254 + + + + G Sbjct: 346 YRCANLPKKQQDFFLNKSFMSCVTIG 371 >UniRef50_B5J622 Putative uncharacterized protein n=1 Tax=Octadecabacter antarcticus 307 RepID=B5J622_9RHOB Length = 70 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 35/57 (61%) Query: 366 PRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 +P S LM+ +D N + G+ TL FA +G++Q WQ++ S RYTTR DL V+ Sbjct: 5 EKPKSAALMSALDQANDRFGKKTLVFASEGMKQPWQLRSNHRSSRYTTRLVDLPVVR 61 >UniRef50_UPI00016987CF DNA-directed DNA polymerase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016987CF Length = 143 Score = 67.1 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 50/150 (33%), Gaps = 11/150 (7%) Query: 253 FGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKL 312 F E + +R + +A R + + ++ ++ + F + + +L Sbjct: 1 FAEDVRQQSLLRSRLQRLSAEVGRLARYKGLSGQVVTLKLRLAGFETH------TRQRRL 54 Query: 313 LTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAP----RP 368 + P I A + G + GV L DF G +LF+ R Sbjct: 55 VIPVDTDDLIFATAWQLYQESQLVGRPVRLIGVGLSDFE-HGPQSEDLFEATPERQMVRQ 113 Query: 369 GSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 +Q+ +D + AK L G + Sbjct: 114 RRKQVFKTLDEVAAKFDSTLLTRGFYGKGK 143 >UniRef50_Q14N04 Putative dna polymerase iv n-terminal and c-terminal truncated protein n=1 Tax=Spiroplasma citri RepID=Q14N04_SPICI Length = 95 Score = 66.7 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 7/88 (7%) Query: 100 IDEAFCDLTG-VRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQR 158 ID+ + D+T +++ V Q+ L +GI+ K+LAK+A+ K Sbjct: 12 IDKCYIDVTDIYLKYGSAMRLALDMQQNVFQQIGLPNSIGISYNKSLAKIASDMKKPMGI 71 Query: 159 QTGGVVDLSNLERQRKLMSALPVDDVWG 186 L E +L+ LPV+ ++G Sbjct: 72 ------TLIRPEDVAQLVQPLPVNKIFG 93 >UniRef50_Q1NNX6 Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NNX6_9DELT Length = 139 Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 36/51 (70%), Positives = 42/51 (82%) Query: 4 LCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDP 54 L D N+FY SCE +F P L G+PVVVLSNNDG VIAR+ EAKALG+KMG+P Sbjct: 23 LLDCNSFYVSCERLFDPGLEGQPVVVLSNNDGGVIARSNEAKALGLKMGEP 73 >UniRef50_Q2IIA1 Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IIA1_ANADE Length = 551 Score = 65.5 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 44/358 (12%), Positives = 79/358 (22%), Gaps = 30/358 (8%) Query: 53 DPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCD------ 106 + R V + + L ++P VE+ + D D Sbjct: 60 QSAAEALAACGRLETVV--RDPAADLVALRALAEVLLGIAPAVEVAAPDALLLDAGAARL 117 Query: 107 -------LTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQ 159 + + +A + A + Sbjct: 118 LAAGAGAVPPGGAFGPGEERLAHRAVQAAADMGYAARAVVATGRGPAAALARYGRFDGAV 177 Query: 160 TGGVVDLSNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFN 219 G + + + + R++ A LA + F Sbjct: 178 HGVAPGGAAAAAALAGLPLAALGLAPAVAGRLAAVGVAG----AGALARLPEGTLAHRFG 233 Query: 220 VVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAARAAEKLR 279 R R RGE L P S + + A R A +L Sbjct: 234 PEGVRAARLARGEDASPLVPHVPET-LPQESLELEAPAEGAEPLLFGLKRLADRVAARLA 292 Query: 280 SEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHR 339 + + P V L P+ + + L + G Sbjct: 293 GRGLGATRLRLVLALDPRGEERI------QVPLSQPSASAARWLVPVKEHLFTLRLPGA- 345 Query: 340 YQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 ++ + QL D L V+ L + G G L+ A + Sbjct: 346 VTALRLVAAEVAPVAAEQLAFGDRPEAV---AALDGVLARLAVRLGDGALFAAEPVAR 400 >UniRef50_C0BD29 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BD29_9FIRM Length = 126 Score = 64.8 bits (156), Expect = 7e-09, Method: Composition-based stats. Identities = 24/121 (19%), Positives = 37/121 (30%), Gaps = 17/121 (14%) Query: 288 ISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVML 347 +S I+ S F S +L + + I AA D +W G + GV Sbjct: 2 VSVEIRYSDFQ------NVSHQKQLGRASGADQVIYEAACSLFDELWN-GEPIRLLGVRT 54 Query: 348 GDFFS-QGVAQLNLFD---------DNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ 397 QL+LFD ++L M + K G + Q Sbjct: 55 AKLVDEDEPEQLSLFDLQFEVKSEKPKKSMEKLKKLSAAMGEIRGKYGADAVIRGSVLEQ 114 Query: 398 Q 398 + Sbjct: 115 R 115 >UniRef50_A2W7A2 Putative uncharacterized protein n=1 Tax=Burkholderia dolosa AUO158 RepID=A2W7A2_9BURK Length = 366 Score = 64.4 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 23/198 (11%), Positives = 50/198 (25%), Gaps = 6/198 (3%) Query: 124 RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDD 183 A L V A T A L + + + + LP Sbjct: 47 CARTLAALGYAARVSAAPTAGGAWLLARV----SARARVRRRVIGHASFVRALDGLPCGL 102 Query: 184 VWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPT 243 + R + D +G +T+ DL +++ L + G+ + P Sbjct: 103 LRD-ARAHAGWFDGLGCRTLADLRRLPRAGLQRRCGPALLAALDRAYGDAVEPIAWM-PV 160 Query: 244 KQEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPY 303 ER+ ++ A + L + ++ ++ Sbjct: 161 PPVFDVRLELPERVEYAEAVLFAARRLVVQLCGWLAARQLSLAAMTFGLEHERGRQGRAA 220 Query: 304 YGNSASVKLLTPTQDSRD 321 V+ + + Sbjct: 221 DAARTRVRDARARRSAFH 238 >UniRef50_Q21Z43 Putative uncharacterized protein n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21Z43_RHOFD Length = 431 Score = 64.4 bits (155), Expect = 8e-09, Method: Composition-based stats. Identities = 35/335 (10%), Positives = 88/335 (26%), Gaps = 25/335 (7%) Query: 72 SNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRT 131 ++ D + + +P+V D +++ + + Sbjct: 5 PEADVDPDAIPALGGWALQYTPKVARL-DDALLLEVSASERLWGGWRA---LLRQIY--- 57 Query: 132 HLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSALPVDDVWGIGRRI 191 T A+ A + Q + S LP+ + R Sbjct: 58 ---TSNKPVATVQYARGATSLIAYARLQDKTLARTSP--------DDLPLHTLA-AARPH 105 Query: 192 SKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSR 251 L+ +G L + + F L + G +L + + Sbjct: 106 LATLERLGCNHWGQLRALPRGGVARRFGAPLLAALDRAYGLQP-ELYPWLALPDVFDVTL 164 Query: 252 SFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVK 311 + G ++ P++ + L+ H+ + A ++ Sbjct: 165 ALGAQVETAPALLFGARRLFQQLQLWLQLRHRGVLALELCWSMD--ARRNTATQGQLPLR 222 Query: 312 LLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSE 371 P+ D ++ A L + + + +L D R + Sbjct: 223 SAEPSADMAHLLRLAGEQLARVTLP-APVHALRLRTLETQKLAGETASLLPDA--RRSGD 279 Query: 372 QLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 L +++ L+A+ G + + + + + Sbjct: 280 SLQQLLERLSARLGAQQVLQMQPCDEHRPEKMQVW 314 >UniRef50_UPI0001BC9B94 impB/mucB/samB family protein n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC9B94 Length = 143 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 52/160 (32%) Query: 263 MRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDI 322 +++A+ +Y ARAAEKLR++ C+ + ++T F +E Y N ++L T D+ Sbjct: 34 IKEAVATYTARAAEKLRAQGSVCKKMRLSVRTGMFNPDEAKYANGVVIELPYATNDT--- 90 Query: 323 INAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNA 382 +LM+VMD++N+ Sbjct: 91 -------------------------------------------------RLMSVMDSINS 101 Query: 383 KEGRGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 + GRGTL A + +R ++S YTTR +L K Sbjct: 102 RWGRGTLRTATVPTTPECAKRRDLMSQSYTTRVDELWIAK 141 >UniRef50_Q6F8Z6 Fragment of component of DNA polymerase V (UmuC) (Part 1) pseudogene n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F8Z6_ACIAD Length = 115 Score = 63.2 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 2/114 (1%) Query: 310 VKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPG 369 + L T + +I A L I+++GH Y+KA + L D + +LF ++ R Sbjct: 1 MHLKDYTDNLLEINQAVQSGLKIIFKSGHIYKKARITLLDIIPKHHYAPDLFVNSDQRVK 60 Query: 370 SEQLMTVMDTLNAKEGRGTLYFAGQGIQQQ--WQMKRAMLSPRYTTRSSDLLRV 421 +++L+ + +N G+ + A Q W+M + SP Y +S LLRV Sbjct: 61 NQKLLDTLIKINTNHGKNRIVLASLIHHQPRCWEMNQLYKSPSYLMQSKALLRV 114 >UniRef50_Q8TS33 Predicted protein n=1 Tax=Methanosarcina acetivorans RepID=Q8TS33_METAC Length = 108 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 35/86 (40%) Query: 198 MGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERI 257 MGI V +LA+ DI+ + + F + R + G ++EE + II S +F E Sbjct: 1 MGISKVEELANCDIQRLTERFGKMGLRLKQAAHGLDFSEIEESGEAIKSIIWSSTFKENT 60 Query: 258 TDYPSMRQAICSYAARAAEKLRSEHQ 283 D + + A + L Sbjct: 61 NDPIKIAGYLEMLAESVHKSLFKHRL 86 >UniRef50_O31841 DNA repair protein homolog yozK n=173 Tax=Bacillales RepID=YOZK_BACSU Length = 115 Score = 62.5 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 10/107 (9%) Query: 2 FALCDVNAFYASCETVFRP-DLWGKPVVVLSN---NDGCVIARNAEAKA-LGVKMGDPWF 56 D+ +FYAS V + + V+ N V+A + K G+K G F Sbjct: 12 ILCVDMKSFYASVSAVAMGLNPLTCYLAVVGNTDRQGSVVLAASPALKKDFGIKTGSRLF 71 Query: 57 KQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR--VEIYSID 101 + + + + +L+ +S + P V YSID Sbjct: 72 E---IPEDPRIYIVNPQMKLFIRVSTEITKLFYRFVPEKCVHTYSID 115 >UniRef50_B9DP45 Truncated ImpB/MucB/SamB family protein (Fragment 2) n=1 Tax=Staphylococcus carnosus subsp. carnosus TM300 RepID=B9DP45_STACT Length = 124 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 39/103 (37%) Query: 299 LNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLGDFFSQGVAQL 358 G L PT ++I + D + + Y+ + L F +G+ QL Sbjct: 10 GYRDGGGVHKQFTLQEPTNLDKEIWEMVEKWADKLCEKDMLYRTLSISLTQFVPEGIQQL 69 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQ 401 NLF D R SE L +D L K G+G + A + Sbjct: 70 NLFVDEYERKRSEALAKTIDQLQQKYGKGIVSKAVSYTDAGTK 112 >UniRef50_A8J5N9 DNA polymerase eta/iota (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J5N9_CHLRE Length = 384 Score = 62.1 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 22/73 (30%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNN----------------------DGCVI 38 + A D++AFYA E P L G+PV V+ N +G +I Sbjct: 29 VVAHIDLDAFYAQVEVGRNPSLRGRPVAVVQYNPWDTEALKTALRPDDPRIFNDSNGSII 88 Query: 39 ARNAEAKALGVKM 51 A + EA+ GVK Sbjct: 89 AVSYEARKFGVKR 101 >UniRef50_C5GUZ9 DNA polymerase iota n=4 Tax=Ajellomyces RepID=C5GUZ9_AJEDR Length = 731 Score = 60.9 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 33/238 (13%), Positives = 61/238 (25%), Gaps = 76/238 (31%) Query: 112 NCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNL-- 169 + IR + + T VGI+ +K LAKLA + K + L Sbjct: 192 RLILGSHLASYIRHQLEEHKSYTATVGISTSKLLAKLAGNVHKPRNQT-----TLLPPYN 246 Query: 170 ----------------------------ERQRKLMSALPVDDVWGIGRRISKKLDAM--- 198 + + A + + GIG +I++K+ Sbjct: 247 STNDDDDAYFDHDDGDDDDYDEKHAQQQSNIIRFLDAHDISAIPGIGFKIAQKIRRHVLG 306 Query: 199 -----GIK---------TVLDLADTDIRFIRKHF-----------------------NVV 221 GI TV D+ + Sbjct: 307 RELSSGIYEQLSKADYVTVKDVRLHPNMGPLTLNELLLLSSSTSSGSGGGVGSGALPKDI 366 Query: 222 LERTVRELRGEPCLQLEEFAPTKQEIICSRSFGE-RITDYPSMRQAICSYAARAAEKL 278 + L G + +I S+G+ R+ +R + + A ++ Sbjct: 367 GMKIWGLLHGIDPSPVAGARAVPTQISIEDSYGDGRLEGLDVVRGELVALAGSLLRRM 424 Score = 59.0 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 5/95 (5%) Query: 23 WGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSN 82 ++L V+ N EA+ G++ + K + +V + + D S Sbjct: 16 RDDSRIILHFQKQIVVTCNYEARRRGLRKLQLIKEAKKVCPDVVIVPGE-DLTKFRDASK 74 Query: 83 RVMSTLEELSP----RVEIYSIDEAFCDLTGVRNC 113 + S L RVE DE F D+T + + Sbjct: 75 EIYSFLRGFVSGWGGRVERLGFDEVFLDVTSLVDY 109 >UniRef50_Q0PGJ8 AIBO80 (Fragment) n=1 Tax=Bos taurus RepID=Q0PGJ8_BOVIN Length = 285 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 18/43 (41%) Query: 2 FALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEA 44 D++ F+ S RPDL GKPV V SN A Sbjct: 77 IMHVDMDCFFVSVGIRNRPDLKGKPVAVTSNRGTGRAPLRPGA 119 >UniRef50_A9VZM8 DNA-directed DNA polymerase n=4 Tax=Methylobacterium RepID=A9VZM8_METEP Length = 127 Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 8/126 (6%) Query: 303 YYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ----AGHRYQKAGVMLGDFFSQGVAQL 358 S V L T D+ +I AA S+ W+ RY KAGV+ D +Q Sbjct: 1 MRSISTVVTLPEATNDTLALIPAALHSVTRTWREQGCPPWRYSKAGVVTVDLVPLAASQR 60 Query: 359 NLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLY--FAGQGIQQQ-WQMKRAMLSPRYTTRS 415 L S ++M MD N + RG++ A Q++ W K M + YTT+ Sbjct: 61 ALIGRFDR-ERSTRVMGAMDACNVRFVRGSVVPERARLAQQRRTWTTKFEMRTQCYTTQV 119 Query: 416 SDLLRV 421 +L Sbjct: 120 DELPVA 125 >UniRef50_UPI00016B15B1 hypothetical protein BpseBC_02629 n=8 Tax=pseudomallei group RepID=UPI00016B15B1 Length = 152 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 33/120 (27%), Gaps = 2/120 (1%) Query: 35 GCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSPR 94 G V+ +A A+A GV+ G L +V + AD V L SP Sbjct: 34 GVVLIADAPARANGVRAGMKRGGVLTLAPGTRLV--ERDPAREADALRAVALALLRFSPC 91 Query: 95 VEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAK 154 V + D+ L V A T A L A Sbjct: 92 VALDDEATLVVDVGASLRLFGGLPSLCRQVRATLAALGYAARVAAAPTGRGAWLLARAPA 151 >UniRef50_C5B9L5 DNA polymerase IV n=1 Tax=Edwardsiella ictaluri 93-146 RepID=C5B9L5_EDWI9 Length = 154 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 28/138 (20%) Query: 5 CDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRR 64 ++ F+A E G PV + GV+ P + L+R Sbjct: 17 IYMDCFFAEVEIR------GFPV-----------------RRDGVRSAMPTAQVLKLWRT 53 Query: 65 CGVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGV-RNCRDLTDFGREI 123 + +S + SP V+ S+DE + D++ + +I Sbjct: 54 LR----PGRMVVCKGVSGEIHRIFHRYSPWVDPLSLDETYLDVSDCPLHQGSAMLMTWQI 109 Query: 124 RATVLQRTHLTVGVGIAQ 141 A + + + GVG Sbjct: 110 CADITAKRPCSHGVGQYP 127 >UniRef50_D0SUP5 Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SUP5_ACILW Length = 78 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 2/79 (2%) Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQG-IQQQWQMK 403 ++L + ++F D ++ LM ++ ++ + G+ L ++W M Sbjct: 1 MILTCLEPKASYVYDMFTDMKHIELNDTLMDSLERIHVRYGKSKLALGASMIPNRRWNMS 60 Query: 404 RAMLSPRYTTRSSDLLRVK 422 R L+ Y LL VK Sbjct: 61 RDRLTQNYFM-WDQLLVVK 78 >UniRef50_A7MTX6 Putative uncharacterized protein n=3 Tax=Vibrio RepID=A7MTX6_VIBHB Length = 86 Score = 57.5 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 27/38 (71%), Positives = 31/38 (81%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVI 38 MFAL D NAFY S E VFRP+ GKP+VVLSNNDGC++ Sbjct: 1 MFALVDANAFYCSAEQVFRPEWRGKPIVVLSNNDGCLV 38 >UniRef50_C4QSD8 DNA polymerase IV / kappa, putative (Fragment) n=1 Tax=Schistosoma mansoni RepID=C4QSD8_SCHMA Length = 121 Score = 57.1 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 4/92 (4%) Query: 93 PRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANHA 152 P +E+ C + RE+R V T LT G+ +AK+A+ Sbjct: 32 PELEVCIECGLLCKSGRRIFGLSAWEAVREMRFRVFCATRLTCSAGLGPNTLIAKIASDW 91 Query: 153 AKKWQRQTGGVVDLSNLERQRKLMSALPVDDV 184 K + E K M +PV V Sbjct: 92 IKPCGQHEIAN----TSEAVDKFMQTMPVRKV 119 >UniRef50_UPI0001BC93B4 ultraviolet light resistance protein B, interruption-C n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC93B4 Length = 98 Score = 56.7 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 ++L + +G NLF + P E + V+D ++ + G+GTL A W ++R Sbjct: 1 MLLANLCQKGEYTENLFSISQPVATEEII-GVLDAIDGRWGKGTLRVASVPTNPDWGLRR 59 Query: 405 AMLSPRYTTRSSDLLRV 421 M+S R+TTR L V Sbjct: 60 EMMSQRFTTRVDQLWTV 76 >UniRef50_Q93QE1 Orf5 n=6 Tax=Streptococcus RepID=Q93QE1_STRPN Length = 143 Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 27/69 (39%) Query: 339 RYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQ 398 ++ GV F + L+LFDD +L T +D + + G + + Sbjct: 62 AVRQIGVSYSGFVDESYTLLSLFDDVEQIEKDNRLQTAIDVVREQFGFLAIQKGTVLTEG 121 Query: 399 QWQMKRAML 407 ++R+ L Sbjct: 122 SRNIERSKL 130 >UniRef50_A7MP32 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MP32_ENTS8 Length = 90 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 49/76 (64%), Positives = 58/76 (76%), Gaps = 1/76 (1%) Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 LGDFFSQGVAQLNLFD++APR SE L+++ D N + GRGTLYFAGQGIQQ WQMKR Sbjct: 12 LGDFFSQGVAQLNLFDESAPRANSEALISLRDKFNQQ-GRGTLYFAGQGIQQSWQMKRER 70 Query: 407 LSPRYTTRSSDLLRVK 422 LSP TT +D+ + Sbjct: 71 LSPCCTTWLADVQTAR 86 >UniRef50_B8IIJ8 Putative uncharacterized protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IIJ8_METNO Length = 119 Score = 52.1 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Query: 348 GDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQ--QQWQMKRA 405 D + LF LM MD N + GRGT+ A G++ ++W K Sbjct: 30 TDLVRLAESPRALFGSLDR-ERGGALMAAMDACNRRFGRGTVVPARAGLEAKRRWATKFE 88 Query: 406 MLSPRYTTRSSDLLRV 421 + +PRYTTR +++ V Sbjct: 89 LRTPRYTTRLAEVPVV 104 >UniRef50_C1RL94 Putative uncharacterized protein n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RL94_9CELL Length = 173 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 28/92 (30%), Gaps = 4/92 (4%) Query: 22 LWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMS 81 P V + A +A A+A GV+ G + + + +V + + Sbjct: 25 PVDVPAAVHDGRR--ITAVSALARADGVRRGMRRRQAQGVCPE--LVLLPVDDARDVRLF 80 Query: 82 NRVMSTLEELSPRVEIYSIDEAFCDLTGVRNC 113 V + E + VE+ G Sbjct: 81 EPVAAATETVVAGVEVARPGMLLLPAGGAARF 112 >UniRef50_A5UTK6 Putative uncharacterized protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UTK6_ROSS1 Length = 431 Score = 50.9 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 33/106 (31%) Query: 168 NLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVR 227 +E + + + GIG I+++L A GI T +A + +H E+ VR Sbjct: 169 PVEPAAERFHQDDLQQIPGIGPAIARRLHAAGISTFAAVAACTPAELARHTGRSAEQIVR 228 Query: 228 ELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 E L + + + E + Sbjct: 229 MGWIERARDLALSSRAESQPAPETKEREDMVSEEPSILFAAILLDE 274 >UniRef50_Q6F8Y8 Fragment of component of DNA polymerase V (UmuC) (Part 2) pseudogene n=2 Tax=Acinetobacter RepID=Q6F8Y8_ACIAD Length = 64 Score = 49.8 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/42 (50%), Positives = 28/42 (66%) Query: 1 MFALCDVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNA 42 +FAL D+N Y SCE +F P L G+PV+VLS+NDG + Sbjct: 19 IFALIDINNAYVSCERIFEPKLNGRPVIVLSSNDGQRSPLDY 60 >UniRef50_A8UAE8 Putative uncharacterized protein n=1 Tax=Carnobacterium sp. AT7 RepID=A8UAE8_9LACT Length = 110 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 6/96 (6%) Query: 36 CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYADMSNRVMSTLEELSP-- 93 + A K G+K G ++ + R + LY ++ + + E Sbjct: 18 VLAASTRVKKEYGIKTGSRRYE---IPRHSFIQIVEPRMTLYLRINEIINAIFLEFVSEN 74 Query: 94 RVEIYSIDEAFCDLTGVRNCRDLT-DFGREIRATVL 128 + +YSIDE+F D+T T + +I+AT+ Sbjct: 75 DLHLYSIDESFLDVTASNTLYGSTKEIALKIQATIW 110 >UniRef50_B9K728 Nuclease (RecB family)-like protein n=1 Tax=Thermotoga neapolitana DSM 4359 RepID=B9K728_THENN Length = 400 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%) Query: 169 LERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVR 227 + ++KL+ + V GIG + L MGI+T+ DL++ D R + K F R + Sbjct: 165 EDCEKKLLERKSLLLVNGIGEETRRILYEMGIETIEDLSNADQRAMEKIFGKEKGRRFIL 224 Query: 228 ELRGEPCLQLEEFAPTKQ 245 R ++ P ++ Sbjct: 225 AARAFLEDRVIVIEPPER 242 >UniRef50_A3QER9 Putative uncharacterized protein n=1 Tax=Shewanella loihica PV-4 RepID=A3QER9_SHELP Length = 684 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/165 (11%), Positives = 40/165 (24%), Gaps = 34/165 (20%) Query: 19 RPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSSNYELYA 78 + G + + ++ ++ A LGV+ G + L + + + L Sbjct: 20 QGLPQGGELALFERQSSQILIASSAAAKLGVEPGQSLATAQALCPSLQL--LAYDPSLSQ 77 Query: 79 DMSNRVMSTLEELSPRVEIYSI--------------------------------DEAFCD 106 + S+ + S RV D + Sbjct: 78 EASHWLCQWSYGYSARVVPPVCPFEQAQQHRLNKPSKSHKASKSSRSSDVPSMADTLLLE 137 Query: 107 LTGVRNCRDLTDFGREIRATVLQRTHLTVGVGIAQTKTLAKLANH 151 + + D Q L + + LA+L Sbjct: 138 VGSMAKIFGGLDRLIRQYQKSAQDYGLECQFALGENALLAQLGAR 182 >UniRef50_A9MHU5 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- RepID=A9MHU5_SALAR Length = 86 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 47/64 (73%), Positives = 50/64 (78%) Query: 347 LGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKRAM 406 LG FFSQGV QLNLFDDNAPR GSE+LM V+D LNAKEGRG L G+GIQQQ MKR M Sbjct: 7 LGGFFSQGVVQLNLFDDNAPRAGSEKLMEVLDHLNAKEGRGILISLGEGIQQQLAMKRDM 66 Query: 407 LSPR 410 S R Sbjct: 67 RSSR 70 >UniRef50_D1REI8 Putative uncharacterized protein n=1 Tax=Legionella longbeachae D-4968 RepID=D1REI8_LEGLO Length = 1277 Score = 47.1 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 9/86 (10%) Query: 173 RKLMSAL--PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 + AL PV + G+ + + L+ +GIKT+ DLA + I + Sbjct: 14 MDALQALSQPVSTLLGVSNQTEQTLNKLGIKTIYDLATCPLFLI-------AQDIASAAN 66 Query: 231 GEPCLQLEEFAPTKQEIICSRSFGER 256 GE + II S Sbjct: 67 GEGHSIIARSGRISSSIINPDSPQTP 92 >UniRef50_UPI000187C717 hypothetical protein MPER_04090 n=1 Tax=Moniliophthora perniciosa FA553 RepID=UPI000187C717 Length = 149 Score = 45.9 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 40/114 (35%), Gaps = 8/114 (7%) Query: 214 IRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICSYAAR 273 ++ F LR +++E + + ++ S++ + IT I AA Sbjct: 1 MQHKFGEEAIWVYEILR----TEVKEKSAVNKSMLASKNLQKPITKASEGHHWIRVLAAE 56 Query: 274 AAEKLRSEHQYCRFISTF---IKTSPFALNEPYYGNSASVK-LLTPTQDSRDII 323 + +L + + + L ++ S S L ++ ++++ Sbjct: 57 LSLRLNDARKLNPHLWPKTLVLHARQGKLPFLFHAKSRSTPSLPAGSKLWKELV 110 >UniRef50_A7NMG2 Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NMG2_ROSCS Length = 437 Score = 45.5 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 3/83 (3%) Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239 + + GIG I+++L GI T LA + E+ VR E L Sbjct: 109 DLQQIPGIGPAIARRLRTAGITTFAALAACSPSDLAAWTGRSAEQIVRMGWIERARDLTH 168 Query: 240 FAPTKQEIICSRSFGERITDYPS 262 P + + + + + Sbjct: 169 PTPP---LEATATEPSPVETAAA 188 >UniRef50_B0TUJ6 Putative uncharacterized protein n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TUJ6_SHEHH Length = 50 Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 22/37 (59%) Query: 386 RGTLYFAGQGIQQQWQMKRAMLSPRYTTRSSDLLRVK 422 + L + I +W M+R ML+P+YTTR D+ +K Sbjct: 13 KRALIKMAKWISLKWGMRREMLTPQYTTRWKDIPLIK 49 >UniRef50_B8IQT5 Putative uncharacterized protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IQT5_METNO Length = 93 Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 381 NAKEGRGTLY--FAGQGIQQQWQMKRAMLSPRYTTRSSDLLRV 421 NA+ GRG + AG ++ W + M +PRYTTR +L V Sbjct: 46 NARFGRGAVVPARAGLVDKRTWSTRFEMRTPRYTTRPDELPVV 88 >UniRef50_B0KIZ4 Putative uncharacterized protein n=1 Tax=Pseudomonas putida GB-1 RepID=B0KIZ4_PSEPG Length = 167 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 1/97 (1%) Query: 289 STFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVMLG 348 S I+T F +E Y N V+L PT DSR + AA ++ +++ G RY A V+L Sbjct: 34 SLSIRTGMFNPDEAKYANGVLVELPYPTDDSRLLTKAAQEGVERVFREGFRYSTAEVLLL 93 Query: 349 DFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEG 385 D +L A SE+LM V+D +N G Sbjct: 94 DLSQPIEITGDL-SATAQPVASEKLMGVLDAVNGMVG 129 >UniRef50_Q1CC71 Error-prone repair protein UmuC n=9 Tax=Yersinia pestis RepID=Q1CC71_YERPN Length = 48 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 14/24 (58%), Positives = 17/24 (70%) Query: 399 QWQMKRAMLSPRYTTRSSDLLRVK 422 +W +KR MLSP YTTR S+L K Sbjct: 24 EWHIKREMLSPAYTTRWSELPIAK 47 >UniRef50_C6QRJ6 Putative uncharacterized protein n=1 Tax=Geobacillus sp. Y4.1MC1 RepID=C6QRJ6_9BACI Length = 114 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 10/120 (8%) Query: 286 RFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQ-AGHRYQKAG 344 R +S ++ S N SV T T + DI + R L + R Sbjct: 4 RTVSFSVRYSIMKENYQ------SVTFDTGTNLTMDIYHVCKRILHKFYDGQNMRVIVIY 57 Query: 345 VMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTLYFAGQGIQQQWQMKR 404 V L + + QL+LF+D L+ MD + + + +++ K+ Sbjct: 58 VSLENLMDEESLQLSLFEDRT---KERTLVKTMDAIRNRSELPFVRSQLHIRKRRQYPKQ 114 >UniRef50_A4YMQ8 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YMQ8_BRASO Length = 254 Score = 43.2 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 23/57 (40%) Query: 167 SNLERQRKLMSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLE 223 R L S+ +D++ +G + KL + I+TV +LA +R Sbjct: 182 IKHGFVRSLASSRDIDELRALGPALKAKLRRLNIRTVGELAAQRPDHLRTLLGPPGR 238 >UniRef50_A1RYZ3 Rad51-like protein n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RYZ3_THEPD Length = 315 Score = 43.2 bits (100), Expect = 0.020, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 178 ALPVDDV---WGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELR 230 +P++++ GIGR +L + GI+TV DL + + + + ER +R +R Sbjct: 2 PIPIEELGKEEGIGRVTISRLKSAGIETVEDLVLYNPEELEELAGIDFERALRLVR 57 >UniRef50_UPI0000D52C0C Hypothetical Cytosolic Protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=UPI0000D52C0C Length = 134 Score = 43.2 bits (100), Expect = 0.021, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 4/83 (4%) Query: 15 ETVFRPDLWGKPVVVLSNNDG--CVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 E V + P V+ + G + A N A+A G+ G + L + Sbjct: 38 EIVMPAEKRDTPFVLAEHQRGTQRLAAVNIAAEACGLHTGMALADARVLVPDMHIEMLDP 97 Query: 73 NYELYADMSNRVMSTLEELSPRV 95 ++ L +P V Sbjct: 98 ARGA--AALDKCARWLRRYTPWV 118 >UniRef50_D2C795 RecB family nuclease, putative n=5 Tax=Thermotogaceae RepID=D2C795_THENR Length = 394 Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 186 GIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVV-LERTVRELRGEPCLQLEEFAPTK 244 GIG + L MGI+T+ DLA D R + K F +R + R ++ P + Sbjct: 174 GIGEETYRVLYGMGIETLEDLAGADQRILEKVFGKEKGKRFIMAARAFLENRVIMITPPE 233 Query: 245 Q 245 Sbjct: 234 D 234 >UniRef50_Q5JTF2 Polymerase (DNA directed), eta (Fragment) n=5 Tax=Coelomata RepID=Q5JTF2_HUMAN Length = 72 Score = 41.7 bits (96), Expect = 0.050, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 23/67 (34%), Gaps = 6/67 (8%) Query: 53 DPWFKQKDLFRRCGVVCF-----SSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDL 107 K L + +N Y + S VM + +E SIDEA+ DL Sbjct: 1 MWADDAKKLCPDLLLAQVRESRGKANLTKYREASVEVMEIMSRF-AVIERASIDEAYVDL 59 Query: 108 TGVRNCR 114 T R Sbjct: 60 TSAVQER 66 >UniRef50_A8LST4 Putative uncharacterized protein n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=A8LST4_DINSH Length = 1471 Score = 41.3 bits (95), Expect = 0.062, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 22/36 (61%) Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIR 215 PV ++ G+ R ++ +L+ G++T+ DLA +R Sbjct: 1413 PVTELEGVSREVAARLERAGVRTIGDLATASTAKLR 1448 >UniRef50_B9NM42 Adenylate/guanylate cyclase n=2 Tax=Rhodobacteraceae RepID=B9NM42_9RHOB Length = 1104 Score = 41.3 bits (95), Expect = 0.077, Method: Composition-based stats. Identities = 20/191 (10%), Positives = 39/191 (20%), Gaps = 11/191 (5%) Query: 210 DIRFIRKHFNVVLERTVRELRGEPCLQLEEFAPTKQEIICSRSFGERITDYPSMRQAICS 269 + + VL + L + ++ I S E +T + Sbjct: 658 SQPQLAQTQPEVLAQHYTLAHRTDEAVLHWQSAGRRAIERSA-LTEALTHLSKALDQLAE 716 Query: 270 YAARAAEKLRSEHQYCRFISTFIKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRS 329 L+ TS + S L ++ + Sbjct: 717 LPKSRERDLQEIDIQILRAGVLRSTSGISGVATGEAYSRLRDLCHRADETERLFPVLNGL 776 Query: 330 LDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGTL 389 + + L L + M + G L Sbjct: 777 --------YAFHLVRAEYRMAQEVSAQILELAAETGKTEHRMVGHRAMGAVQLHLGH--L 826 Query: 390 YFAGQGIQQQW 400 A ++Q W Sbjct: 827 AQAQSHLEQAW 837 >UniRef50_UPI0001693F66 DNA polymerase IV n=2 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001693F66 Length = 83 Score = 41.3 bits (95), Expect = 0.078, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 25/90 (27%), Gaps = 13/90 (14%) Query: 329 SLDAIWQAGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRPGSEQLMTVMDTLNAKEGRGT 388 W G +K V L + QL F + L +D + + G + Sbjct: 2 LFKKHWD-GLPVRKISVSLEELVRDDTMQLTFF--------EDALEKALDDIKDRFGNAS 52 Query: 389 LYFAGQGIQQQWQMK----RAMLSPRYTTR 414 + + + M P +R Sbjct: 53 VMCTVSITGSDQAKELHILKNMKKPHLMSR 82 >UniRef50_A3DL12 DEAD/DEAH box helicase domain protein n=1 Tax=Staphylothermus marinus F1 RepID=A3DL12_STAMF Length = 716 Score = 40.9 bits (94), Expect = 0.084, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 57/178 (32%), Gaps = 36/178 (20%) Query: 64 RCGVVCFSSNYELYADM-----SNRVMSTLEELSPRVEIYSIDEAFCDLTGVRNCRDLTD 118 ++ Y D S L + ++ I E + G + D Sbjct: 559 DEDIIPEPPKTFEYYDYYVWLQSFVQAKMLHDWINEIDEDEIAEKY--GVGPGDIYSARD 616 Query: 119 FGREI---RATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKL 175 I + V + TV AN+ K R GV + Sbjct: 617 TASWIASALSRVEKVLGNTVR------------ANNLEKLSIRLEYGVKE---------- 654 Query: 176 MSALPVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKH--FNVVLER-TVRELR 230 AL + ++ GIGR ++ L GIK++ DLA T I F L R +LR Sbjct: 655 -DALELVELQGIGRVRARTLIKHGIKSLKDLASTPPSKIESLPGFGSRLVRSLYEQLR 711 >UniRef50_UPI0001903B53 DNA polymerase III alpha subunit protein n=1 Tax=Rhizobium etli Kim 5 RepID=UPI0001903B53 Length = 287 Score = 40.9 bits (94), Expect = 0.084, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 6/91 (6%) Query: 16 TVFRPDLW-GKPVVVL--SNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRCGVVCFSS 72 P L P+VV+ S + V A + A LG+++G P K + L + ++ + Sbjct: 50 RRADPSLNPDTPLVVIARSGSKRWVAAADQAAAKLGLRVGMPAAKAQALVQGLTMI--DA 107 Query: 73 NYELYADMSNRVMST-LEELSPRVEIYSIDE 102 + R+ L + SP V + D Sbjct: 108 DPVADLATLERLTLWALSQYSPVVAMDPPDG 138 >UniRef50_UPI000180D06C PREDICTED: similar to REV1-like n=1 Tax=Ciona intestinalis RepID=UPI000180D06C Length = 404 Score = 40.9 bits (94), Expect = 0.084, Method: Composition-based stats. Identities = 9/55 (16%), Positives = 18/55 (32%) Query: 292 IKTSPFALNEPYYGNSASVKLLTPTQDSRDIINAATRSLDAIWQAGHRYQKAGVM 346 ++T+ F + S S L T D I + ++ + G+ Sbjct: 9 VETAKFKGHGVCNSISRSKNLNEYTDDCDIIGREGITLMKSLQLNVTDLRGIGIQ 63 >UniRef50_C1ZKU0 Putative uncharacterized protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKU0_PLALI Length = 572 Score = 40.9 bits (94), Expect = 0.087, Method: Composition-based stats. Identities = 10/69 (14%), Positives = 28/69 (40%), Gaps = 1/69 (1%) Query: 152 AAKKWQRQTGGVVDLSNLERQRKLMS-ALPVDDVWGIGRRISKKLDAMGIKTVLDLADTD 210 A K + + ++ +P++ IG + ++K + GI+TV + + + Sbjct: 403 AGKVQAVSEPATGRMVQEHESQFYLAMNMPLEKAPSIGPKTAEKFTSAGIRTVGEFVNAE 462 Query: 211 IRFIRKHFN 219 + + + Sbjct: 463 PHELARKLS 471 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.127 0.319 Lambda K H 0.267 0.0386 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,252,804,699 Number of Sequences: 3077464 Number of extensions: 95873273 Number of successful extensions: 332280 Number of sequences better than 1.0e-01: 896 Number of HSP's better than 0.1 without gapping: 2368 Number of HSP's successfully gapped in prelim test: 380 Number of HSP's that attempted gapping in prelim test: 319030 Number of HSP's gapped (non-prelim): 3385 length of query: 422 length of database: 1,040,396,356 effective HSP length: 131 effective length of query: 291 effective length of database: 637,248,572 effective search space: 185439334452 effective search space used: 185439334452 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 94 (40.9 bits)