58 d1jnra2 Probab=99.38   E-value=3e-10  Score=91.49  Aligned_columns=289  Identities=13%

Q ss_pred             CCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHH----CCCEEEEEECCCCCCCCCCEEEE-----------------
Q ss_conf             988899888889875258999897899999999998----89859999568664557846778-----------------
Q batch____         1 MAIQHPDIQPAVNHSVQVAIAGAGPVGLMMANYLGQ----MGIDVLVVEKLDKLIDYPRAIGI-----------------   59 (554)
Q Consensus         1 ~~~~~p~~~pa~~~~~dVlIVGAGpaGL~lA~~Lar----~Gi~v~iiEr~~~~~~~~ra~~l-----------------   59 (554)
                      |-..-||..|...-++||+||||||+||++|+.|+|    .|++|+||||.+.+.......++                 
T Consensus         7 ~~~~~~~~~~~~~~e~DVvIIGaGpAGlsAA~~lAr~~~~~G~~V~vlEk~~~~gg~~~~~g~~~~~~~~~~~~~~~~~~   86 (356)
T d1jnra2           7 YELYKADEVPTEVVETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQN   86 (356)
T ss_dssp             CCCCCGGGSCEEEEECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCC
T ss_pred             CCCCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCCCCCCCCHHCCCCCC
T ss_conf             44448754530479853899989688999999999845637983999977887881010023223263332000146456


Q ss_pred             -----------------CHHHHHHH--HHCCCHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEHHHHH
Q ss_conf             -----------------78899999--99799478886037122169982898389973166566676516898898999
Q batch____        60 -----------------DDEALRTM--QSVGLVDDVLPHTTPWHAMRFLTPKGRCFADIQPMTDEFGWPRRNAFIQPQVD  120 (554)
Q Consensus        60 -----------------~p~~le~L--~~lGl~~~l~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~q~~le  120 (554)
                                       .+...+.+  ..-...+.+...+.+..             .....................+.
T Consensus        87 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-------------~~~~~~~~~~~~~~~~~~G~~~~  153 (356)
T d1jnra2          87 TLEDYVRYVTLDMMGLAREDLVADYARHVDGTVHLFEKWGLPIW-------------KTPDGKYVREGQWQIMIHGESYK  153 (356)
T ss_dssp             CHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCBC-------------BCTTSCBCBSSSSCEEEEETTHH
T ss_pred             CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE-------------EECCCCCCCCCCEEEECCHHHHH
T ss_conf             98999999997304666899999999603688999996798699-------------80776441254169973603579


Q ss_pred             HHHHHHHHHCCCEE-EEEEEEEEEEEEECCCE-----EEEEEECCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCC
Q ss_conf             99999987379858-93244676787405631-----4787404201103410012466675205788739886576645
Q batch____       121 AVMLEGVSRFPNVR-CLFSRELEAFSQQDDEV-----TLHLKTAEGQREIVKAQWLVACDGGASFVRRTLNVPFEGKTAP  194 (554)
Q Consensus       121 ~~L~~~~~~~~~~~-v~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~~i~a~~vVGaDG~~S~vR~~lgi~~~~~~~~  194 (554)
                      ..+.+.+.+.+... +..++....+.......     ........+....+.++.+|-|.|..+.+...-+.........
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vila~gg~~~i~~~~~~~~~~~~~~  233 (356)
T d1jnra2         154 PIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLFRPRSTGEAAGRTW  233 (356)
T ss_dssp             HHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSSCCSCCSGGGGCCS
T ss_pred             HHHHHHHHHCCCCEEEECCCEEEEEEEECCCCCCEEEEEEEECCCCEEEEEEECCEEECCCCCCEEEECCCCCCCCCCEE
T ss_conf             99999998455781895184289999957856531248999648972999940838974777400132123334444136


Q ss_pred             CEEEEEEEECCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEEECCCCCHHHCCCHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf             01999998238877572399984994199998789829999997678894455998999999988578753202420224
Q batch____       195 NQWIVVDIANDPLSTPHIYLCCDPVRPYVSAALPHAVRRFEFMVMPGETEEQLREPQNMRKLLSKVLPNPDNVELIRQRV  274 (554)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (554)
                                                                        ........-..+.-............+...
T Consensus       234 --------------------------------------------------~~~~~~~dg~~~~~~~g~~l~~~~~~~~~~  263 (356)
T d1jnra2         234 --------------------------------------------------YAIFDTGSGYYMGLKAGAMLTQAGFWVCGP  263 (356)
T ss_dssp             --------------------------------------------------SCTTCBSHHHHHHHHHTCCEECCEECCCCC
T ss_pred             --------------------------------------------------EECCCCCCCEEEEEEECCEEECCCEEECCC
T ss_conf             --------------------------------------------------400004882289997082764031021344


Q ss_pred             CC---------CCCCCCCCCCCCCEEEECCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHHHHH
Q ss_conf             52---------23312455456888997164577887-2336660479999999999999-8738983899998999978
Q batch____       275 YT---------HNARLAQRFRIDRVLLAGDAAHIMPV-WQGQGYNSGMRDAFNLAWKLAL-VIQGKARDALLDTYQQERR  343 (554)
Q Consensus       275 ~~---------~~~~~a~~~~~gRV~LvGDAAH~~~P-~~GqG~N~gi~DA~~LawkLa~-v~~g~~~~~lL~~Y~~eRr  343 (554)
                      ..         +....-.+.+.++|+++||||+..+| +.+-++..|+.-|...+..|.. ..++...+..|++|+.+..
T Consensus       264 ~~~~~~~~~~~i~v~~~~~ts~~gv~a~GDaa~~~~~~~~~~A~~~G~~Aa~~a~~~i~~~~~~~~~~~~~~~~~~~~~~  343 (356)
T d1jnra2         264 EDLMPEEYAKLFPLKYNRMTTVKGLFAIGDCAGANPHKFSSGSFTEGRIAAKAAVRFILEQKPNPEIDDAVVEELKKKAY  343 (356)
T ss_dssp             TTTCCHHHHTTCSSCCTTBCSSBTEEECGGGBCSCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCEEECCCCEECCCCEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf             34531355873358665351699879940220665641024578988999999999984068865469899999999999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999999
Q batch____       344 DHAKAMIDL  352 (554)
Q Consensus       344 p~a~~~~~~  352 (554)
                      ....+..+.
T Consensus       344 ~~~~~~~~~  352 (356)
T d1jnra2         344 APMERFMQY  352 (356)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHC
T ss_conf             999978743