 |
| Job Description | P77397 | | Confidence | 94.71% | Date | Thu Jan 5 12:28:35 GMT 2012 |
| Rank | 418 | Aligned Residues | 40 |
| % Identity | 25% | Template | c1pzfD_ |
| PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:lactate dehydrogenase; |
PDBTitle: t.gondii ldh1 ternary complex with apad+ and oxalate
|
| Resolution | 2.20 Å |
|
|   |   |
10 | . | . | . | . | . | |
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
40 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
| . |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
P | A | V | N | H | S | . |
V | Q | V | A | I | A | G | A | G | P | V | G | L | M | M | A | N | Y | L | G | Q | M | G | I | . |
D | V | L | V | V | E | K | L | D | K |
| Query Conservation |   |
|
|   |   |   |   | . |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|
|   |
|
| . |   |
|   |
|
|
|
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|   |
|   |
|   |   |   |   |
| Template Sequence |   |
P | A | L | V | Q | R | R | K | K | V | A | M | I | G | S | G | M | I | G | G | T | M | G | Y | L | C | A | L | R | E | L | A | D | V | V | L | Y | D | V | V | K | G |
| Template Known Secondary structure |   |
|
|
|
| S |
|
|
|  |  |  |  |  | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |
| S | S | S | S |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|