Job Description P76423 Confidence 20.50% Date Thu Jan 5 12:22:57 GMT 2012 Rank 241 Aligned Residues 77 % Identity 12% Template c2w27A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:ykui protein; PDBTitle: crystal structure of the bacillus subtilis ykui protein,2 with an eal domain, in complex with substrate c-di-gmp and3 calcium Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	A	M	R	A	A	V	E	Q	A	K	S	S	Q	T	P	W	T	L	D	P	V	A	V	G	A	L	D	Y	R	R	H	F	C	H	E	L	L	S	F	K	P	A	A	I	R	G	N	A	S	E	I	M	A	L	A	G	I	A	N	G	G	R	G	V	D	T	T	D	A	A	A	N	A	I	P	A	A	Q
Query Conservation
Alig confidence																																.	.							.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.							.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	Q	L	Y	H	M	L	A	Y	Y	R	T	Y	G	I	K	I	A	V	D	N	I	G	K	E	S	S	N	L	.	.	D	R	I	A	L	L	.	.	.	S	P	D	L	L	K	I	D	L	Q	A	L	S	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	H	V	L	Y	S	I	S
Template Known Secondary structure														T	T	T									T	T	T	B				.	.							.	.	.			S							T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.							.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.			.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																.	.	.	.	.	.	.	190	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	A	R	E	T	G	A	I	V	V	V	T	G	E	M	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A	R	K	I	G	A	A	L	L	Y	E	D	I	E	A
Template Known Secondary structure								T										S
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions