Phyre 2 alignment of Q2EER5 with c2nloA_

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Job Description | Q2EER5
Confidence | 56.00% | Date | Thu Jan 5 12:33:45 GMT 2012
Rank | 114 | Aligned Residues | 36
% Identity | 22% | Template | c2nloA_
PDB info | PDB header:oxidoreductase | Chain: A: PDB Molecule:shikimate dehydrogenase; | PDBTitle: crystal structure of the quinate dehydrogenase from corynebacterium2 glutamicum
Resolution | 1.64 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | N | V | L | I | L | G | A | G | G | Q | I | A | R | H | V | I | N | Q | L | A | D | K | Q | T | I | K | Q | T | L | F | A | R | Q | P | A | K
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | S | V | V | Q | V | G | A | G | G | V | . | G | N | A | V | A | Y | A | L | V | T | H | G | V | Q | K | L | Q | V | A | D | L | D | T | S | R
Template Known Secondary structure |  | S |  |  |  |  |  |  |  | S | T | T | . |  |  |  |  |  |  |  |  |  |  | T | T |  | S |  |  |  |  |  |  | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 147 | . | . | 150 | . | . | . | . | . | . | . |  | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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