Phyre 2 alignment of Q2EER5 with c2b7fD_

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Job Description | Q2EER5
Confidence | 28.32% | Date | Thu Jan 5 12:33:45 GMT 2012
Rank | 183 | Aligned Residues | 39
% Identity | 38% | Template | c2b7fD_
PDB info | PDB header:hydrolase/hydrolase inhibitor | Chain: D: PDB Molecule:htlv protease; | PDBTitle: crystal structure of human t-cell leukemia virus protease, a novel2 target for anti-cancer design
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | K | N | V | L | I | L | G | A | G | G | Q | I | A | R | H | V | I | N | Q | L | A | D | K | Q | T | I | K | Q | T | L | F | A | R | Q | P | A | K | I | H | K | P | Y | P | T | N | K | M | Q | T | T | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | K | N | T | S | V | L | G | A | G | G | . | . | . | . | . | . | . | . | . | . | . | . | . | Q | T | Q | D | H | F | K | L | T | S | L | P | V | L | I | R | L | P | F | R | T | T | P | I | V | L | T | S
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | S | S | S | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  | S | S | S |  |  |  |  | S | S |  |  |  |  |  |  | S | S |  | S | S |  |  |  |  | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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