16/01/2012 18:41:26 : INFO  : Run start: Mon Jan 16 18:41:26 GMT 2012
16/01/2012 18:41:26 : INFO  : Initialised job
16/01/2012 18:41:26 : INFO  : Renaming log file 'phyre2_20120116_184126.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/911b0d836dcb5704/phyre_20120116_184126.log'
16/01/2012 18:41:26 : INFO  : Initialised job:
Sequence
>batch____
MPACELRPATQYDTDAVYALICELKQAEFDHHAFRVGFNANLRDPNMRYHLALLDGEVVG
MIGLHLQFHLHHVNWIGEIQELVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVK
RHDAHRFYLREGYEQSHFRFTKAL

16/01/2012 18:41:26 : INFO  : Checked sequence
16/01/2012 18:41:26 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 18:41:26 : INFO  : PSI-BLAST 3 iterations
16/01/2012 18:42:56 : INFO  : PSI-BLAST 5 iterations
16/01/2012 18:45:31 : INFO  : Finished PSI-BLAST
16/01/2012 18:45:31 : INFO  : Running Buildali to generate a3m file
16/01/2012 19:58:21 : INFO  : Converting to HMM
16/01/2012 19:58:23 : INFO  : Calibrating HMM
16/01/2012 19:58:28 : INFO  : Searching HMM database
16/01/2012 20:01:21 : INFO  : Finished buildali
16/01/2012 20:01:21 : INFO  : Predicting secondary structure
16/01/2012 20:01:22 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 20:01:22 : INFO  : Predicting Disordered regions
16/01/2012 20:01:22 : INFO  : Predicted Disorder (Disopred)
16/01/2012 20:01:22 : INFO  : Running memsat_svm check
16/01/2012 20:03:26 : INFO  : Globular protein
16/01/2012 20:03:26 : INFO  : Predicted Transmembrane (memsat_svm) ID '911b0d836dcb5704'
16/01/2012 20:03:26 : INFO  : Initialising fold library search
16/01/2012 20:03:26 : INFO  : Initialised search input
16/01/2012 20:03:26 : INFO  : Building Ensemble models
16/01/2012 20:03:26 : INFO  : Building hh.d1tiqa_.model.1.pdb
16/01/2012 20:03:27 : INFO  : Building hh.d1s3za_.model.2.pdb
16/01/2012 20:03:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/911b0d836dcb5704/hh.d1s3za_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/911b0d836dcb5704/d1s3za_.2.pdb
16/01/2012 20:03:27 : INFO  : Building hh.d1qsma_.model.3.pdb
16/01/2012 20:03:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/911b0d836dcb5704/hh.d1qsma_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/911b0d836dcb5704/d1qsma_.3.pdb
16/01/2012 20:03:27 : INFO  : Building hh.d2beia1.model.4.pdb
16/01/2012 20:03:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/911b0d836dcb5704/hh.d2beia1.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/911b0d836dcb5704/d2beia1.4.pdb
16/01/2012 20:03:28 : INFO  : Building hh.c2r1iB_.model.5.pdb
16/01/2012 20:03:28 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/911b0d836dcb5704/hh.c2r1iB_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/911b0d836dcb5704/c2r1iB_.5.pdb
16/01/2012 20:03:28 : INFO  : Building hh.c3dsbB_.model.6.pdb
16/01/2012 20:03:28 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/911b0d836dcb5704/hh.c3dsbB_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/911b0d836dcb5704/c3dsbB_.6.pdb
16/01/2012 20:03:28 : INFO  : Building d1tiqa_.1.pdb
16/01/2012 20:03:29 : INFO  : Building d1s3za_.2.pdb
16/01/2012 20:03:29 : INFO  : Building d1qsma_.3.pdb
16/01/2012 20:03:29 : INFO  : Building d2beia1.4.pdb
16/01/2012 20:03:30 : INFO  : Building c2r1iB_.5.pdb
16/01/2012 20:03:30 : INFO  : Building c3dsbB_.6.pdb
16/01/2012 20:03:30 : INFO  : Building c2dxqA_.7.pdb
16/01/2012 20:03:31 : INFO  : Building c1ufhB_.8.pdb
16/01/2012 20:03:31 : INFO  : Building c2pswA_.9.pdb
16/01/2012 20:03:31 : INFO  : Building c3exnA_.10.pdb
16/01/2012 20:03:31 : INFO  : Building d1ufha_.11.pdb
16/01/2012 20:03:32 : INFO  : Building c3i9sA_.12.pdb
16/01/2012 20:03:32 : INFO  : Building d2cy2a1.13.pdb
16/01/2012 20:03:35 : INFO  : Building c2oh1A_.14.pdb
16/01/2012 20:03:35 : INFO  : Building c3dr8B_.15.pdb
16/01/2012 20:03:35 : INFO  : Building d1yvoa1.16.pdb
16/01/2012 20:03:35 : INFO  : Building c2q0yA_.17.pdb
16/01/2012 20:03:36 : INFO  : Building c2pdoG_.18.pdb
16/01/2012 20:03:36 : INFO  : Building c3k9uA_.19.pdb
16/01/2012 20:03:36 : INFO  : Building d2euia1.20.pdb
16/01/2012 20:03:41 : INFO  : Finished HH model building
16/01/2012 20:03:41 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 20:03:46 : INFO  : html domain output complete ID '911b0d836dcb5704'
16/01/2012 20:24:01 : INFO  : Run end  : Mon Jan 16 20:24:01 GMT 2012
