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Job DescriptionP33368
Confidence98.57%DateThu Jan 5 11:52:08 GMT 2012
Rank254Aligned Residues229
% Identity10%Templatec3slgB_
PDB info PDB header:transferaseChain: B: PDB Molecule:pbgp3 protein; PDBTitle: crystal structure of pbgp3 protein from burkholderia pseudomallei
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20...... ...30.........40.........50.........60.........70.........80
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Query Sequence  AQVAIITASDSGIGKECALLLAQQG. FDIGITWHSDEEGAKDTAREVVSHGVRAEIVQLDLGNLPEGALALEKLIQRLGR
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Template Sequence  AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGD. . . . . . LVKHERMHFFEGDITINKEWVEYHVKKCDVILP
Template Known Secondary structure 

S
SS


S

TTSGG......GGGSTT

TTT

S
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   3......10.........20.........30.........40... ......50.........60.........70......
 
   81........90.........100.........110.........120.........130.........140....... .
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Query Sequence  IDVLVNNAGAMTKAPFLDMAFDEWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPL. . . . . . . . . . . . P
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Template Sequence  LVAIATP. . . . . . . . . . ATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINK
Template Known Secondary structure 
B



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TTTTT


GGGGBS


SSB
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B


TT
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   77..80... ......90.........100.........110.........120.........130.........140......
 
   149150.........160.........170.........180.........190..... ....200.........210....
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Query Sequence  DASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMNGMDD. . . . . . SDVKPDAEPSIPLRRFGAT. . . . . . . .
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Template Sequence  PRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTY
Template Known Secondary structure  GGGTTT

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TT

BS
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GGGG


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   147..150.........160.........170.........180.........190.........200.........210.........220......
 
   215....220..... ....230.........240......
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Query Sequence  . HEIASLVVWLC. SEGANYTTGQSLIVDGGFMLA
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Template Sequence  VDDGISALMKIIENSNGVATGKIYNIGNPNNNFS
Template Known Secondary structure 
GGGTTTT

TTS
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   227..230.........240.........250.........260
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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