73 c1vmaA_ Probab=92.55   E-value=0.5  Score=24.35  Aligned_columns=122  Identities=15%

Q ss_pred             CCCCCCEEEEEEC--CCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHC-
Q ss_conf             5668828999608--8830689999999986598299715866310278899827898828999758987223678850-
Q batch____        96 QQVPARVVALTGS--SGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELGANHQGEIAWTVS-  172 (452)
Q Consensus        96 ~~~~~~vI~VTGT--~GKTTt~~~l~~iL~~~g~~~~~~g~~n~~ig~~~t~~~~~~~~d~~V~E~g~~~~~~~~~~~~-  172 (452)
                      ...++.||.++|-  .|||||..=+++.+...|++++....-..++|---.+-..-+...+-++.....  .+...... 
T Consensus        88 ~~~~~~vi~~~Gp~G~GKTTt~aklA~~~~~~g~~v~li~~D~~R~gA~eQL~~~a~~~~v~~~~~~~~--~~~~~~~~~  165 (294)
T c1vmaA_          88 PPEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEG--ADPAAVAFD  165 (294)
T ss_dssp             CSSSCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTT--CCHHHHHHH
T ss_pred             CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCC--CCHHHHHHH
T ss_conf             578966999980688760248999999999679948999758768647999999997619828974883--698999999


Q ss_pred             ------CCCCCEEEECCCCHHHHHHCC--CHHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf             ------058868998178977835539--99999999988730188862998677
Q batch____       173 ------LTRPEAALVNNLAAAHLEGFG--SLAGVAKAKGEIFSGLPENGIAIMNA  219 (452)
Q Consensus       173 ------~~~pdiaViTnI~~DHl~~~g--t~e~ia~~K~~i~~~~~~~~~~i~n~  219 (452)
                            .-+.|+.+|=..|+.|.+.--  .+..+.+.-.......+...++|+++
T Consensus       166 ~~~~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a  220 (294)
T c1vmaA_         166 AVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDA  220 (294)
T ss_dssp             HHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEG
T ss_pred             HHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC
T ss_conf             9999997799899981888987857999999999999630356688539998114