236 c2pseA_ Probab=98.91   E-value=1.9e-07  Score=56.46  Aligned_columns=204  Identities=13%

Q ss_pred             CEEEEECCCCCCHHHHHHHCCHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             08999777899888988631689999866976993156501353056432355555420136764333343318999999
Q batch____        44 PVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAGFYLNATQPPWATHYRMYDYLRD  123 (278)
Q Consensus        44 Plli~lhG~~~~~~~~~~~~~~~~~~~~~g~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~  123 (278)
                      |.|+++||.+++...|   ......+++ ++-|+++|.++.|...........                      .....
T Consensus        42 ~~vvllHG~~~~~~~w---~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~----------------------~~~~~   95 (305)
T c2pseA_          42 NAVIFLHGNATSSYLW---RHVVPHIEP-VARCIIPDLIGMGKSGKSGNGSYR----------------------LLDHY   95 (305)
T ss_dssp             SEEEEECCTTCCGGGG---TTTHHHHGG-GSEEEEECCTTSTTCCCCTTSCCS----------------------HHHHH
T ss_pred             CEEEEECCCCCCHHHH---HHHHHHHHC-CCEEEEECCCCCCCCCCCCCCCCC----------------------HHHHH
T ss_conf             7899988888897889---999997618-988999634223887788643555----------------------78999


Q ss_pred             HHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEEECCCCCC-----------------------------
Q ss_conf             999999820987687799998667899999998593400177741655453-----------------------------
Q batch____       124 ELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNP-----------------------------  174 (278)
Q Consensus       124 el~p~i~~~~~d~~~~~i~G~S~GG~~al~~a~~~Pd~f~~v~~~s~~~~~-----------------------------  174 (278)
                      +.+..+...........+.|+|+||..+...+..+|+....++.+++....                             
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (305)
T c2pseA_          96 KYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIKSEEGEKMVLEN  175 (305)
T ss_dssp             HHHHHHHTTTCCCSSEEEEEEHHHHHHHHHHHHTCTTSEEEEEEEEECCSCBSCSTTSCSCHHHHHHHHSTTHHHHHTTT
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             99998542012222222222222222211001110011331011146677532100123348887530120001111000


Q ss_pred             -------------------------------CCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHCCCCCCEEEEEECCCC
Q ss_conf             -------------------------------3370122332103577334555115227576401117976999832877
Q batch____       175 -------------------------------CSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDND  223 (278)
Q Consensus       175 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~G~~D  223 (278)
                                                     .......................................++.+..|..|
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~~~~D  255 (305)
T c2pseA_         176 NFFVETVLPSKIMRKLEPEEFAAYLEPFKEKGEVRRPTLSWPREIPLVKGGKPDVVQIVRNYNAYLRASDDLPKLFIESD  255 (305)
T ss_dssp             CHHHHTHHHHTCSSCCCHHHHHHHHGGGCSCSGGGHHHHHHHHTCCBTTTSCHHHHHHHHHHHHHHHTCTTSCEEEEEEE
T ss_pred             HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEEECC
T ss_conf             23566655431122489999987776515730245678887642000000123455422000013313798419998068


Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             7556148899999999978997899997689997867999899999999998439
Q batch____       224 QFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYLLK  278 (278)
Q Consensus       224 ~~v~~~~~~~~l~~al~~~g~~~~~~~~~G~~H~~~~~~~~i~~~~~f~~~~l~~  278 (278)
                      ..++..     ..+.+.+.--..++.+++|+-.-..---..+.+.|+=+.+.++|
T Consensus       256 ~~~~~~-----~~~~~~~~~p~~~~~~~~gGH~~~~e~P~~v~~~I~~fL~rv~k  305 (305)
T c2pseA_         256 PGFFSN-----AIVEGAKKFPNTEFVKVKGLHFLQEDAPDEMGKYIKSFVERVLK  305 (305)
T ss_dssp             ECSSHH-----HHHHHHHTSSSEEEEEEEESSCGGGTSHHHHHHHHHHHHHHHHC
T ss_pred             CCCCHH-----HHHHHHHHCCCCEEEEECCCCCHHHHCHHHHHHHHHHHHHHHCC
T ss_conf             767999-----99999997799799998786883474899999999999998619