123 c2cjpA_ Probab=99.69   E-value=4.5e-14  Score=89.98  Aligned_columns=234  Identities=15%

Q ss_pred             EEEEEEECCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHCCHHHHHHHCCCEEEECCCCCEEEEECCCCC
Q ss_conf             99999972121877899998678999888508999777899888988631689999866976993156501353056432
Q batch____        14 QQRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDG   93 (278)
Q Consensus        14 ~~~~~~~S~~lg~~~~~~iylP~~~~~~~~Plli~lhG~~~~~~~~~~~~~~~~~~~~~g~~vv~~~~~~~~~~~~~~~~   93 (278)
                      +|.-..+-.+.|.++.+...       ..-|.|+++||.+++...|   ..+...+++.|+.|+.+|.++.|        
T Consensus         1 ~~~~~~~v~~~g~~l~y~~~-------G~gp~vlliHG~~~~~~~~---~~~~~~L~~~g~~vi~~D~~G~G--------   62 (320)
T c2cjpA_           1 KKIEHKMVAVNGLNMHLAEL-------GEGPTILFIHGFPELWYSW---RHQMVYLAERGYRAVAPDLRGYG--------   62 (320)
T ss_dssp             CCCEEEEEEETTEEEEEEEE-------CSSSEEEEECCTTCCGGGG---HHHHHHHHTTTCEEEEECCTTST--------
T ss_pred             CCEEEEEEEECCEEEEEEEE-------CCCCEEEEECCCCCCHHHH---HHHHHHHHHCCCEEEEECCCCCC--------
T ss_conf             93089999979979999992-------5887799988689988889---99999999789899996776898--------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHCCCCEEEEEEECCCCC
Q ss_conf             35555542013676433334331899999999999982098768779999866789999999859340017774165545
Q batch____        94 YDLGQGAGFYLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVN  173 (278)
Q Consensus        94 ~~~~~~~~~~~d~~~~~~~~~~~~~~~l~~el~p~i~~~~~d~~~~~i~G~S~GG~~al~~a~~~Pd~f~~v~~~s~~~~  173 (278)
                                .................+...+...+........+..+.|+|+||..++.++.++|+.+.++++.++...
T Consensus        63 ----------~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vg~S~Gg~~a~~~a~~~~~~~~~lvl~~~~~~  132 (320)
T c2cjpA_          63 ----------DTTGAPLNDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFS  132 (320)
T ss_dssp             ----------TCBCCCTTCGGGGSHHHHHHHHHHHHHHHCTTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCC
T ss_pred             ----------CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCEEEEECCCCC
T ss_conf             ----------9977666664322279898877642100135878438997172469999999850002158998158777


Q ss_pred             CCCCHHHHHHHHCCCCCCHHHHHHCCCCCHH-------------------------------------------------
Q ss_conf             3337012233210357733455511522757-------------------------------------------------
Q batch____       174 PCSVPWGIKAFSSYLGEDKNAWLEWDSCALM-------------------------------------------------  204 (278)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------  204 (278)
                      ...............................                                                 
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (320)
T c2cjpA_         133 KRNPKMNVVEGLKAIYGEDHYISRFQVPGEIEAEFAPIGAKSVLKKILTYRDPAPFYFPKGKGLEAIPDAPVALSSWLSE  212 (320)
T ss_dssp             CCCSSCCHHHHHHHHHCTTBHHHHTSSTTHHHHHHHHHCHHHHHHHHHTCCCSSCCBCCTTCTTTTSCCCCGGGGTTSCH
T ss_pred             CCCCCCHHHHHHHHHHCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf             76643103444222201013455543101014542001245789998621123310000234443210000122111202


Q ss_pred             ---------------------------------HHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH---HHCCCCEEE
Q ss_conf             ---------------------------------64011179769998328777556148899999999---978997899
Q batch____       205 ---------------------------------YASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAA---RQKAWPMTL  248 (278)
Q Consensus       205 ---------------------------------~~~~~~~~~~~~i~~G~~D~~v~~~~~~~~l~~al---~~~g~~~~~  248 (278)
                                                       ......-..|+++.+|++|..+|.. ..+.+.+.+   +.....+++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~p~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~  291 (320)
T c2cjpA_         213 EELDYYANKFEQTGFTGAVNYYRALPINWELTAPWTGAQVKVPTKFIVGEFDLVYHIP-GAKEYIHNGGFKKDVPLLEEV  291 (320)
T ss_dssp             HHHHHHHHHHHHHCSHHHHHHHHTHHHHHHHTGGGTTCCCCSCEEEEEETTCGGGGST-THHHHHHHSHHHHHSTTBCCC
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEECCCCCCCHH-HHHHHHHHHHHHHHCCCCCEE
T ss_conf             3577766540344524579988742102332000002258998899995788733889-999999854566642798189


Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             997689997867999899999999998439
Q batch____       249 RIQPGYDHSYYFIASFIEDHLRFHAQYLLK  278 (278)
Q Consensus       249 ~~~~G~~H~~~~~~~~i~~~~~f~~~~l~~  278 (278)
                      .+++|++|....=+.  ++..+-..++|.|
T Consensus       292 ~~~~~~gH~~~~e~p--~~v~~~i~~fL~k  319 (320)
T c2cjpA_         292 VVLEGAAHFVSQERP--HEISKHIYDFIQK  319 (320)
T ss_dssp             EEETTCCSCHHHHSH--HHHHHHHHHHHTT
T ss_pred             EEECCCCCCHHHHCH--HHHHHHHHHHHHC
T ss_conf             997898458668278--9999999998850