11/01/2012 02:40:19 : INFO  : Run start: Wed Jan 11 02:40:19 GMT 2012
11/01/2012 02:40:22 : INFO  : Initialised job
11/01/2012 02:40:23 : INFO  : Renaming log file 'phyre2_20120111_024018.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/90e3712bb31b4cb5/phyre_20120111_024018.log'
11/01/2012 02:40:23 : INFO  : Initialised job:
Sequence
>batch____
MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPPVLYWLSGLTCNDENFT
TKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAGFYLNATQPPWATHYRMYDY
LRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPGKYTSVSAFAPIVNPCSVPWG
IKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLIDQGDNDQFLADQLQPAVLAEAAR
QKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYLLK

11/01/2012 02:40:24 : INFO  : Checked sequence
11/01/2012 02:40:26 : INFO  : Finding homologues with PSI-BLAST
11/01/2012 02:40:27 : INFO  : PSI-BLAST 3 iterations
11/01/2012 02:42:02 : INFO  : PSI-BLAST 5 iterations
11/01/2012 02:44:31 : INFO  : Finished PSI-BLAST
11/01/2012 02:44:32 : INFO  : Running Buildali to generate a3m file
11/01/2012 02:55:49 : INFO  : Converting to HMM
11/01/2012 02:55:52 : INFO  : Calibrating HMM
11/01/2012 02:56:02 : INFO  : Searching HMM database
11/01/2012 03:02:53 : INFO  : Finished buildali
11/01/2012 03:02:54 : INFO  : Predicting secondary structure
11/01/2012 03:02:59 : INFO  : Predicted secondary structure (PSI-Pred)
11/01/2012 03:03:00 : INFO  : Predicting Disordered regions
11/01/2012 03:03:02 : INFO  : Predicted Disorder (Disopred)
11/01/2012 03:03:03 : INFO  : Running memsat_svm check
11/01/2012 03:04:34 : INFO  : Globular protein
11/01/2012 03:04:35 : INFO  : Predicted Transmembrane (memsat_svm) ID '90e3712bb31b4cb5'
11/01/2012 03:04:36 : INFO  : Initialising fold library search
11/01/2012 03:04:38 : INFO  : Initialised search input
11/01/2012 03:04:39 : INFO  : Building Ensemble models
11/01/2012 03:04:41 : INFO  : Building hh.c3ls2D_.model.1.pdb
11/01/2012 03:04:48 : INFO  : Building hh.c3e4dD_.model.2.pdb
11/01/2012 03:04:55 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/90e3712bb31b4cb5/hh.c3e4dD_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/90e3712bb31b4cb5/c3e4dD_.1.pdb
11/01/2012 03:04:57 : INFO  : Building hh.d1pv1a_.model.3.pdb
11/01/2012 03:05:03 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/90e3712bb31b4cb5/hh.d1pv1a_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/90e3712bb31b4cb5/d1pv1a_.2.pdb
11/01/2012 03:05:05 : INFO  : Building hh.c3i6yA_.model.4.pdb
11/01/2012 03:05:13 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/90e3712bb31b4cb5/hh.c3i6yA_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/90e3712bb31b4cb5/c3i6yA_.4.pdb
11/01/2012 03:05:16 : INFO  : Building hh.c3fcxA_.model.5.pdb
11/01/2012 03:05:24 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/90e3712bb31b4cb5/hh.c3fcxA_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/90e3712bb31b4cb5/c3fcxA_.5.pdb
11/01/2012 03:05:27 : INFO  : Building c3e4dD_.1.pdb
11/01/2012 03:05:37 : INFO  : Building d1pv1a_.2.pdb
11/01/2012 03:05:46 : INFO  : Building c3ls2D_.3.pdb
11/01/2012 03:05:57 : INFO  : Building c3i6yA_.4.pdb
11/01/2012 03:06:07 : INFO  : Building c3fcxA_.5.pdb
11/01/2012 03:06:14 : INFO  : Building d1dqza_.6.pdb
11/01/2012 03:06:22 : INFO  : Building c1z68A_.7.pdb
11/01/2012 03:06:30 : INFO  : Building c2ecfA_.8.pdb
11/01/2012 03:06:38 : INFO  : Building c2qtbB_.9.pdb
11/01/2012 03:06:45 : INFO  : Building d1jjfa_.10.pdb
11/01/2012 03:06:53 : INFO  : Building d1f0na_.11.pdb
11/01/2012 03:07:00 : INFO  : Building d1sfra_.12.pdb
11/01/2012 03:07:09 : INFO  : Building c2g5tA_.13.pdb
11/01/2012 03:07:18 : INFO  : Building c2eepA_.14.pdb
11/01/2012 03:07:26 : INFO  : Building d3c8da2.15.pdb
11/01/2012 03:07:36 : INFO  : Building c2uz0B_.16.pdb
11/01/2012 03:07:47 : INFO  : Building c3azqA_.17.pdb
11/01/2012 03:07:57 : INFO  : Building d1r88a_.18.pdb
11/01/2012 03:08:06 : INFO  : Building c1qfmA_.19.pdb
11/01/2012 03:08:15 : INFO  : Building c1wb4A_.20.pdb
11/01/2012 03:09:17 : INFO  : Finished HH model building
11/01/2012 03:09:18 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
11/01/2012 03:10:07 : INFO  : html domain output complete ID '90e3712bb31b4cb5'
11/01/2012 04:20:30 : INFO  : Run end  : Wed Jan 11 04:20:29 GMT 2012
