28 c1rnlA_ Probab=99.88   E-value=1.5e-23  Score=157.36  Aligned_columns=194  Identities=25%

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCC
Q ss_conf             959998699899999999999889--899999898999999985898287513333212212101344310334450003
Q batch____         1 MKLLIVEDEKKTGEYLTKGLTEAG--FVVDLADNGLNGYHLAMTGDYDLIILDIMLPDVNGWDIVRMLRSANKGMPILLL   78 (227)
Q Consensus         1 mkILiVdDd~~~~~~l~~~L~~~g--~~V~~a~~~~eal~~~~~~~~dlvl~D~~~~~~~g~~~~~~ir~~~~~~pii~l   78 (227)
                      +||||||||+.++..++..|+..+  ..|..|.|+.+|++.+.+..||++++|+.||+++|.+.++.++...+..+++++
T Consensus         3 i~Ilivdd~~~~~~~l~~~L~~~~~~~~v~~a~~~~eal~~~~~~~pdiilld~~l~~~~g~~~~~~~~~~~~~~~~~~~   82 (200)
T c1rnlA_           3 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVF   82 (200)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEEETTCGGGCHHHHHHHHTTSCCCSEEEEE
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf             08999749989999999999848981799997898999999987199755421111100013689997420310012344


Q ss_pred             CCCCCHHHHHHHHHHHCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             54551566555555320233021122345531675302334211122222222222332211122222222111110000
Q batch____        79 TALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGAAVIIESQFQVADLMVDLVSRKVTRSGTRITLTSKEFTL  158 (227)
Q Consensus        79 t~~~~~~~~~~~~~~ga~dyi~Kp~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~  158 (227)
                      +..........+...++.++..++.....+..........................               .++.+|.+.
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~lt~re~~v  147 (200)
T c1rnlA_          83 SVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASL---------------QLTPRERDI  147 (200)
T ss_dssp             CSCSCHHHHHHHHHTTCSEEECTTSCHHHHHHHHHHHHHSCCCCCTTTHHHHHHHC---------------CCCHHHHHH
T ss_pred             CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------------CCCCCCCCC
T ss_conf             45310111000011222222100122222222222222222222222221111111---------------122211111


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf             000000012456799999985278888875089999999999613678423699877963
Q batch____       159 LEFFLRHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKRLRGKIDNDFEPKLIQTVRGVG  218 (227)
Q Consensus       159 l~~l~~~~~~~~s~~~l~~~v~~~~~~~~~~ti~~~i~rlr~KL~~~~~~~~I~tv~g~G  218 (227)
                      +..+......    .+|++.+     +.|.+||++|+++|++||+..+..+.+......|
T Consensus       148 l~~~~~g~s~----keIA~~L-----~iS~~TV~~h~~~i~~KL~v~nr~el~~~a~~~g  198 (200)
T c1rnlA_         148 LKLIAQGLPN----KMIARRL-----DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER  198 (200)
T ss_dssp             HHHHHTTCCH----HHHHHHH-----TCCHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHT
T ss_pred             CCCCCCCCCH----HHHHHHH-----CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
T ss_conf             2224567768----9989886-----8870699999999999817998899999999817