Phyre 2 alignment of P0AFH2 with c3a0hk_

Return to main results | Retrieve Phyre Job Id

Job Description | P0AFH2
Confidence | 2.78% | Date | Thu Jan 5 11:26:15 GMT 2012
Rank | 72 | Aligned Residues | 23
% Identity | 26% | Template | c3a0hk_
PDB info | PDB header:electron transport | Chain: K: PDB Molecule:photosystem ii reaction center protein k; | PDBTitle: crystal structure of i-substituted photosystem ii complex
Resolution | 4.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | V | M | G | L | A | M | T | G | V | V | I | P | S | F | V | V | A | P | L | L | V | M
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | F | D | P | L | V | D | V | L | P | V | I | P | V | L | F | F | A | L | A | F | V | V
Template Known Secondary structure |  | G | G |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 5017 | . | . | 5020 | . | . | . | . | . | . | . | . | . | 5030 | . | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions