Phyre 2 alignment of P0AFH2 with c3gn5B_

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Job Description | P0AFH2
Confidence | 2.51% | Date | Thu Jan 5 11:26:15 GMT 2012
Rank | 82 | Aligned Residues | 29
% Identity | 17% | Template | c3gn5B_
PDB info | PDB header:dna binding protein | Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021); | PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
Resolution | 2.15 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | L | P | P | E | V | M | A | N | I | E | A | K | Y | H | L | N | D | P | I | M | T | Q | Y | F | S | Y | L | K | Q
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | V | A | P | E | F | I | V | K | V | R | K | K | L | S | L | T | Q | K | E | A | S | E | I | F | G | G | G | V | N
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | S |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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