Phyre 2 alignment of P0AFH2 with c1wz4A_

Return to main results | Retrieve Phyre Job Id

Job Description | P0AFH2
Confidence | 23.70% | Date | Thu Jan 5 11:26:15 GMT 2012
Rank | 11 | Aligned Residues | 9
% Identity | 44% | Template | c1wz4A_
PDB info | PDB header:gene regulation | Chain: A: PDB Molecule:major surface antigen; | PDBTitle: solution conformation of adr subtype hbv pre-s2 epitope
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 297 | . | . | 300 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | A | V | I | D | P | K | I | R
Query Conservation |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Q | A | L | L | D | P | R | V | R
Template Known Secondary structure |  | T | T | S | S | S | T | T |  | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |
|  | 7 | . | . | 10 | . | . | . | . | .

Download: | Text version | FASTA pairwise alignment | 3D Model in PDB format

View in Jmol

|  | Close Jmol

Send structure to FirstGlance for more viewing options

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions