Phyre 2 Results for P0AFH2

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Email | l.a.kelley@imperial.ac.uk
Description | P0AFH2
Date | Thu Jan 5 11:26:15 GMT 2012
Unique Job ID | 902dc12a6339784c

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template d3dhwa1
Top template information
Fold:MetI-like Superfamily:MetI-like Family:MetI-like
Confidence and coverage
Confidence: | 99.9% | Coverage: | 63%
194 residues ( 63% of your sequence) have been modelled with 99.9% confidence by the single highest scoring template.
Additional confident templates have been detected (see Domain analysis) which cover other regions of your sequence.
287 residues ( 94%) could be modelled at >90% confidence using multiple-templates.
You may wish to try resubmitting your sequence in "intensive" mode to model more of your sequence.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | L | K | F | I | L | R | R | C | L | E | A | I | P | T | L | F | I | L | I | T | I | S | F | F | M | M | R | L | A | P | G | S | P | F | T | G | E | R | T | L | P | P | E | V | M | A | N | I | E | A | K | Y | H | L | N | D | P | I | M
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | T | Q | Y | F | S | Y | L | K | Q | L | A | H | G | D | F | G | P | S | F | K | Y | K | D | Y | S | V | N | D | L | V | A | S | S | F | P | V | S | A | K | L | G | A | A | A | F | F | L | A | V | I | L | G | V | S | A | G | V | I | A | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | L | K | Q | N | T | K | W | D | Y | T | V | M | G | L | A | M | T | G | V | V | I | P | S | F | V | V | A | P | L | L | V | M | I | F | A | I | I | L | H | W | L | P | G | G | G | W | N | G | G | A | L | K | F | M | I | L | P | M | V | A
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | L | S | L | A | Y | I | A | S | I | A | R | I | T | R | G | S | M | I | E | V | L | H | S | N | F | I | R | T | A | R | A | K | G | L | P | M | R | R | I | I | L | R | H | A | L | K | P | A | L | L | P | V | L | S | Y | M | G | P | A | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | V | G | I | I | T | G | S | M | V | I | E | T | I | Y | G | L | P | G | I | G | Q | L | F | V | N | G | A | L | N | R | D | Y | S | L | V | L | S | L | T | I | L | V | G | A | L | T | I | L | F | N | A | I | V | D | V | L | Y | A | V | I
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | .
Sequence |  | D | P | K | I | R | Y
Secondary structure |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |
Disorder |  |  |  |  |  | ? | ?
Disorder confidence |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| d3dhwa1 |

### PDB 3dhw chain A domain 1

Region: 89 - 294
Aligned: 194
Modelled: 196
Confidence: 99.9%
Identity: 17%
Fold: MetI-like
Superfamily: MetI-like
Family: MetI-like

Phyre2
2 |
| c3d31D_ |

### PDB 3d31 chain D

Region: 88 - 293
Aligned: 204
Modelled: 206
Confidence: 99.9%
Identity: 18%
PDB header:transport protein
Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease
PDBTitle: modbc from methanosarcina acetivorans

Phyre2
3 |
| d3d31c1 |

### PDB 3d31 chain C domain 1

Region: 88 - 293
Aligned: 204
Modelled: 206
Confidence: 99.9%
Identity: 18%
Fold: MetI-like
Superfamily: MetI-like
Family: MetI-like

Phyre2
4 |
| d2onkc1 |

### PDB 2onk chain C domain 1

Region: 88 - 296
Aligned: 205
Modelled: 209
Confidence: 99.9%
Identity: 15%
Fold: MetI-like
Superfamily: MetI-like
Family: MetI-like

Phyre2
5 |
| c2onkC_ |

### PDB 2onk chain C

Region: 88 - 296
Aligned: 205
Modelled: 209
Confidence: 99.9%
Identity: 15%
PDB header:membrane protein
Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease
PDBTitle: abc transporter modbc in complex with its binding protein2 moda

Phyre2
6 |
| d2r6gf2 |

### PDB 2r6g chain F domain 2

Region: 82 - 292
Aligned: 210
Modelled: 211
Confidence: 99.8%
Identity: 13%
Fold: MetI-like
Superfamily: MetI-like
Family: MetI-like

Phyre2
7 |
| c2r6gF_ |

### PDB 2r6g chain F

Region: 90 - 292
Aligned: 201
Modelled: 203
Confidence: 99.7%
Identity: 12%
PDB header:hydrolase/transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: the crystal structure of the e. coli maltose transporter

Phyre2
8 |
| c3fh6F_ |

### PDB 3fh6 chain F

Region: 1 - 305
Aligned: 285
Modelled: 287
Confidence: 99.7%
Identity: 12%
PDB header:transport protein
Chain: F: PDB Molecule:maltose transport system permease protein malf;
PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli

Phyre2
9 |
| d2r6gg1 |

### PDB 2r6g chain G domain 1

Region: 6 - 293
Aligned: 255
Modelled: 263
Confidence: 99.5%
Identity: 15%
Fold: MetI-like
Superfamily: MetI-like
Family: MetI-like

Phyre2
10 |
| d1ntca_ |

### PDB 1ntc chain A

Region: 191 - 223
Aligned: 33
Modelled: 33
Confidence: 24.7%
Identity: 12%
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: Homeodomain-like
Family: FIS-like

Phyre2
11 |
| c1wz4A_ |

### PDB 1wz4 chain A

Region: 297 - 305
Aligned: 9
Modelled: 9
Confidence: 23.7%
Identity: 44%
PDB header:gene regulation
Chain: A: PDB Molecule:major surface antigen;
PDBTitle: solution conformation of adr subtype hbv pre-s2 epitope

Phyre2
12 |
| c1umqA_ |

### PDB 1umq chain A

Region: 191 - 222
Aligned: 32
Modelled: 32
Confidence: 17.7%
Identity: 19%
PDB header:dna-binding protein
Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein;
PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity

Phyre2
13 |
| d1umqa_ |

### PDB 1umq chain A

Region: 191 - 222
Aligned: 32
Modelled: 32
Confidence: 17.7%
Identity: 19%
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: Homeodomain-like
Family: FIS-like

Phyre2
14 |
| d1n0ua5 |

### PDB 1n0u chain A domain 5

Region: 30 - 65
Aligned: 35
Modelled: 36
Confidence: 17.3%
Identity: 11%
Fold: Ferredoxin-like
Superfamily: EF-G C-terminal domain-like
Family: EF-G/eEF-2 domains III and V

Phyre2
15 |
| d1fipa_ |

### PDB 1fip chain A

Region: 191 - 223
Aligned: 33
Modelled: 33
Confidence: 13.9%
Identity: 12%
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: Homeodomain-like
Family: FIS-like

Phyre2
16 |
| d1etob_ |

### PDB 1eto chain B

Region: 191 - 223
Aligned: 33
Modelled: 33
Confidence: 13.8%
Identity: 12%
Fold: DNA/RNA-binding 3-helical bundle
Superfamily: Homeodomain-like
Family: FIS-like

Phyre2
17 |
| c2cw1A_ |

### PDB 2cw1 chain A

Region: 202 - 219
Aligned: 18
Modelled: 18
Confidence: 11.0%
Identity: 39%
PDB header:de novo protein
Chain: A: PDB Molecule:sn4m;
PDBTitle: solution structure of the de novo-designed lambda cro fold2 protein

Phyre2
18 |
| c3e7lD_ |

### PDB 3e7l chain D

Region: 191 - 223
Aligned: 33
Modelled: 33
Confidence: 10.7%
Identity: 15%
PDB header:transcription regulator
Chain: D: PDB Molecule:transcriptional regulator (ntrc family);
PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain

Phyre2
19 |
| c2ka1A_ |

### PDB 2ka1 chain A

Region: 98 - 122
Aligned: 25
Modelled: 25
Confidence: 9.8%
Identity: 16%
PDB header:membrane protein
Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles

Phyre2
20 |
| c2ka2B_ |

### PDB 2ka2 chain B

Region: 98 - 122
Aligned: 25
Modelled: 25
Confidence: 9.8%
Identity: 16%
PDB header:membrane protein
Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting
PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints

Phyre2
21 |
22 |
23 |
24 |
25 |
26 |
27 |
28 |
29 |

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d3dhwa1 |
|  | 99.9 | 17 | Fold:MetI-like Superfamily:MetI-like Family:MetI-like
2 | c3d31D_ |
|  | 99.9 | 18 | PDB header:transport protein Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease PDBTitle: modbc from methanosarcina acetivorans
3 | d3d31c1 |
|  | 99.9 | 18 | Fold:MetI-like Superfamily:MetI-like Family:MetI-like
4 | d2onkc1 |
|  | 99.9 | 15 | Fold:MetI-like Superfamily:MetI-like Family:MetI-like
5 | c2onkC_ |
|  | 99.9 | 15 | PDB header:membrane protein Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease PDBTitle: abc transporter modbc in complex with its binding protein2 moda
6 | d2r6gf2 |
|  | 99.8 | 13 | Fold:MetI-like Superfamily:MetI-like Family:MetI-like
7 | c2r6gF_ |
|  | 99.7 | 12 | PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter
8 | c3fh6F_ |
|  | 99.7 | 12 | PDB header:transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli
9 | d2r6gg1 |
|  | 99.5 | 15 | Fold:MetI-like Superfamily:MetI-like Family:MetI-like
10 | d1ntca_ |
|  | 24.7 | 12 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like
11 | c1wz4A_ |
|  | 23.7 | 44 | PDB header:gene regulation Chain: A: PDB Molecule:major surface antigen; PDBTitle: solution conformation of adr subtype hbv pre-s2 epitope
12 | c1umqA_ |
|  | 17.7 | 19 | PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity
13 | d1umqa_ |
|  | 17.7 | 19 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like
14 | d1n0ua5 |
|  | 17.3 | 11 | Fold:Ferredoxin-like Superfamily:EF-G C-terminal domain-like Family:EF-G/eEF-2 domains III and V
15 | d1fipa_ |
|  | 13.9 | 12 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like
16 | d1etob_ |
|  | 13.8 | 12 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like
17 | c2cw1A_ |
|  | 11.0 | 39 | PDB header:de novo protein Chain: A: PDB Molecule:sn4m; PDBTitle: solution structure of the de novo-designed lambda cro fold2 protein
18 | c3e7lD_ |
|  | 10.7 | 15 | PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
19 | c2ka1A_ |
|  | 9.8 | 16 | PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles
20 | c2ka2B_ |
|  | 9.8 | 16 | PDB header:membrane protein Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints
21 | c2ka1B_ |
| not modelled | 9.8 | 16 | PDB header:membrane protein Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles
22 | c2ka2A_ |
| not modelled | 9.8 | 16 | PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints
23 | d1wpga4 |
| not modelled | 9.4 | 22 | Fold:Calcium ATPase, transmembrane domain M Superfamily:Calcium ATPase, transmembrane domain M Family:Calcium ATPase, transmembrane domain M
24 | c2jwaA_ |
| not modelled | 8.5 | 27 | PDB header:transferase Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2; PDBTitle: erbb2 transmembrane segment dimer spatial structure
25 | d1g2ha_ |
| not modelled | 8.1 | 9 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like
26 | d1etxa_ |
| not modelled | 7.7 | 12 | Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like
27 | c2j5dA_ |
| not modelled | 7.7 | 16 | PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: nmr structure of bnip3 transmembrane domain in lipid2 bicelles
28 | c1ciiA_ |
| not modelled | 7.0 | 15 | PDB header:transmembrane protein Chain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia
29 | d1tdpa_ |
| not modelled | 6.9 | 5 | Fold:Bromodomain-like Superfamily:Bacteriocin immunity protein-like Family:Carnobacteriocin B2 immunity protein

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0