Phyre 2 alignment of P0AFH2 with d1n0ua5

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Job Description | P0AFH2
Confidence | 17.26% | Date | Thu Jan 5 11:26:15 GMT 2012
Rank | 14 | Aligned Residues | 35
% Identity | 11% | Template | d1n0ua5
SCOP info | Ferredoxin-like | EF-G C-terminal domain-like | EF-G/eEF-2 domains III and V
Resolution | 2.12

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |  |  | . | . | . | . | 60 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Query Sequence |  | A | P | G | S | P | F | T | G | E | R | T | L | P | P | E | V | M | A | N | I | E | A | K | Y | H | L | . | . | N | D | P | I | M | T | Q | Y | F | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | G | S | D | P | L | D | . | P | T | S | K | A | G | E | I | V | L | A | A | R | K | R | H | G | M | K | E | E | V | P | G | W | Q | E | Y | Y | D
Template Known Secondary structure |  |  |  | S |  | T | T |  | . | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  | S | S |  |  |  | G | G | G | G |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 804 | . | . | . | . | . | 810 |  | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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